python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.3XHMGBOX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.3XHMGBOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ABF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ABF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ABI5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ABI5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ABR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ABR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.Adof1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.Adof1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL13 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AGL13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL15 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AGL15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL16 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AGL16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL25 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AGL25 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL42 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AGL42 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL6 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AGL6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL63 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AGL63 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL95 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AGL95 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AIL7 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AIL7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC004 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC004 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC005 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC005 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC011 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC011 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC013 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC013 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC016 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC016 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC017 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC017 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC020 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC020 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC028 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC028 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC034 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC034 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC038 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC038 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC042 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC042 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC045 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC045 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC046 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC046 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC047 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC047 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC050 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC050 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC053 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC053 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC055 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC055 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC057 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC057 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC058 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC058 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC062 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC062 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC070 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC070 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC071 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC071 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC075 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC075 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC079 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC079 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC083 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC083 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC087 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC087 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC092 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC092 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC094 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC094 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC096 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC096 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC103 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANAC103 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANL2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ANL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AREB3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AREB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ARF16 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ARF16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ARF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ARF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AS2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ASHR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ASHR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ASL18 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ASL18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G01250 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G01250 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G04880 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G04880 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G10720 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G10720 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G12630 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G12630 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g13300 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g13300 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g14580 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g14580 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G18960 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G18960 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g19000 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g19000 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G19040 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G19040 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g19210 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g19210 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G20910 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G20910 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g22810 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g22810 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G23810 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G23810 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G24250 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G24250 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g25550 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g25550 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G28160 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G28160 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g36060 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g36060 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G44830 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G44830 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G47655 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G47655 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g49010 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g49010 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G49560 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G49560 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g64620 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g64620 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G66420 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G66420 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g68670 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g68670 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G69570 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G69570 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g69690 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g69690 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g70910 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g70910 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G71450 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G71450 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g72010 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g72010 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G72740 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G72740 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g74370 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g74370 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g74840 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g74840 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g75490 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g75490 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g76110 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g76110 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G76870 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G76870 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G76880 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G76880 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G77200 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT1G77200 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g77640 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g77640 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g78700 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At1g78700 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g01060 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At2g01060 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G01818 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT2G01818 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g03500 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At2g03500 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G15740 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT2G15740 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G17410 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT2G17410 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G20110 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT2G20110 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G20400 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT2G20400 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G28810 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT2G28810 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G28920 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT2G28920 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G31460 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT2G31460 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G33550 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT2G33550 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g33710 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At2g33710 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g38090 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At2g38090 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G38300 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT2G38300 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G40260 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT2G40260 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g41835 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At2g41835 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g44940 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At2g44940 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g45680 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At2g45680 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g04030 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At3g04030 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g09600 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At3g09600 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G09735 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G09735 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G10030 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G10030 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G10113 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G10113 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G10580 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G10580 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g11280 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At3g11280 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G12130 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G12130 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g12730 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At3g12730 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G12910 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G12910 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g13040 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At3g13040 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g14180 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At3g14180 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G16280 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G16280 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g24120 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At3g24120 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G25990 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G25990 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G42860 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G42860 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g45610 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At3g45610 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G46070 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G46070 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G49930 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G49930 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G51470 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G51470 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G52440 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G52440 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G57600 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G57600 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G58630 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G58630 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G60490 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT3G60490 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g60580 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At3g60580 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G00250 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT4G00250 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g01280 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At4g01280 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G12670 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT4G12670 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g16750 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At4g16750 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G18450 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT4G18450 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g18890 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At4g18890 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G26030 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT4G26030 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G27900 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT4G27900 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g28140 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At4g28140 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g31060 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At4g31060 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g32800 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At4g32800 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g36780 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At4g36780 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G37180 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT4G37180 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g38000 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At4g38000 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G02460 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT5G02460 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g04390 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g04390 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G05550 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT5G05550 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g05790 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g05790 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g08330 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g08330 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g08520 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g08520 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g08750 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g08750 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G18090 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT5G18090 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g18450 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g18450 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g22890 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g22890 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G22990 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT5G22990 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G23930 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT5G23930 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g29000 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g29000 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G45580 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT5G45580 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g47390 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g47390 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G47660 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT5G47660 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g52660 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g52660 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G56840 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT5G56840 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g58900 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g58900 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G59990 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT5G59990 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G60130 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT5G60130 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G61620 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT5G61620 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g62940 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g62940 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G63260 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT5G63260 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g65130 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g65130 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g66730 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g66730 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G66940 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AT5G66940 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g67000 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.At5g67000 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATAF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATAF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AtGRF6 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AtGRF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB13 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB15 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB18 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB20 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB21 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB23 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB24 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB24 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB25 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB25 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AtHB32 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AtHB32 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB33 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB33 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB34 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB34 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB40 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB53 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB53 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB6 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB7 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATHB7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AtIDD11 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AtIDD11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AtNLP4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AtNLP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATY13 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATY13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATY19 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ATY19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AZF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.AZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BAM8 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.BAM8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BBX31 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.BBX31 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH10 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bHLH10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH104 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bHLH104 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH122 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bHLH122 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH130 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bHLH130 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH157 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bHLH157 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH18 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bHLH18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH28 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bHLH28 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH31 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bHLH31 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH34 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bHLH34 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH69 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bHLH69 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH74 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bHLH74 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH77 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bHLH77 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH80 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bHLH80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BIM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.BIM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BIM2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.BIM2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BIM3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.BIM3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BOS1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.BOS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BPC1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.BPC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BPC5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.BPC5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BPC6 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.BPC6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP16 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bZIP16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP18 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bZIP18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP28 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bZIP28 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bZIP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP42 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bZIP42 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP43 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bZIP43 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP44 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bZIP44 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP48 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bZIP48 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP50 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bZIP50 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP52 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bZIP52 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP53 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bZIP53 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP68 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bZIP68 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP69 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.bZIP69 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BZR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.BZR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CAMTA1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CAMTA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CAMTA5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CAMTA5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CBF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CBF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CBF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CBF3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CBF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CBF4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CBF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CDF3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CDF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CDM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CDM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CEJ1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CEJ1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.COG1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.COG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CRC 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CRC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CRF10 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CRF10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CRF4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CRF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CUC1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CUC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CUC2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CUC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CUC3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.CUC3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DAG2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.DAG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DDF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.DDF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DDF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.DDF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEAR2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.DEAR2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEAR3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.DEAR3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEAR5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.DEAR5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.DEL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEL2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.DEL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.dof24 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.dof24 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.dof42 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.dof42 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.dof43 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.dof43 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.dof45 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.dof45 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DREB19 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.DREB19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DREB2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.DREB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DREB26 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.DREB26 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.E2FA 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.E2FA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.E2FC 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.E2FC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EDT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.EDT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EIL3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.EIL3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EIN3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.EIN3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EMB1789 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.EMB1789 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EPR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.EPR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF10 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF104 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF104 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF105 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF105 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF11 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF115 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF115 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF13 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF15 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF38 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF38 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF48 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF48 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF6 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF7 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF73 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF73 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF8 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF9 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ERF9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ESE1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ESE1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ESE3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ESE3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.FAR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.FAR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.FHA2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.FHA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.FRS9 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.FRS9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.FUS3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.FUS3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GATA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA11 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GATA11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA12 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GATA12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA14 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GATA14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA15 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GATA15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA16 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GATA16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA19 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GATA19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA20 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GATA20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GATA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA6 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GATA6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GBF3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GBF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GBF5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GBF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GBF6 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GBF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GRF9 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GRF9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GT2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GT3a 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GT3a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GTL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.GTL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAP3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HAP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HAT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAT2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HAT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAT22 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HAT22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAT5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HAT5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HDG1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HDG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HDG7 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HDG7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSF21 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HSF21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSF3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HSF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSF6 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HSF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSF7 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HSF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFA1E 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HSFA1E -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFA6A 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HSFA6A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFA6B 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HSFA6B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFB3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HSFB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFB4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HSFB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFC1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HSFC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HY5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.HY5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.IDD2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.IDD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.IDD4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.IDD4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.IDD5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.IDD5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.IDD7 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.IDD7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.JGL 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.JGL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.JKD 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.JKD -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.KAN2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.KAN2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD13 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.LBD13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD18 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.LBD18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD19 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.LBD19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.LBD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD23 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.LBD23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LCL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.LCL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LEP 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.LEP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LHY1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.LHY1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LMI1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.LMI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LOB 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.LOB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MGP 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MGP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MP 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MS188 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MS188 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB10 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB101 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB101 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB105 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB105 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB107 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB107 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB113 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB113 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB116 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB116 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB118 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB118 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB119 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB119 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB121 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB121 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB13 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB17 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB23 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB27 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB27 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB30 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB30 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB33 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB33 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB39 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB39 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB3R1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB3R1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB3R4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB3R4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB3R5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB3R5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB40 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB41 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB41 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB43 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB43 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB44 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB44 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB49 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB49 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB51 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB51 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB52 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB52 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB55 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB55 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB56 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB56 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB57 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB57 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB58 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB58 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB60 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB60 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB61 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB61 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB62 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB62 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB63 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB63 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB65 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB65 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB67 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB67 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB70 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB70 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB73 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB73 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB74 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB74 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB77 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB77 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB81 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB81 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB83 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB83 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB88 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB88 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB92 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB92 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB93 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB93 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB94 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB94 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB96 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB96 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB98 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB98 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB99 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.MYB99 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NAC2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.NAC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NAM 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.NAM -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NAP 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.NAP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NFYB4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.NFYB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NGA4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.NGA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NLP7 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.NLP7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NST1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.NST1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NTL8 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.NTL8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NTM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.NTM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NTM2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.NTM2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NUC 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.NUC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.OBP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.OBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.OBP3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.OBP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.OBP4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.OBP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PDF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.PDF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PHV 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.PHV -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PIF7 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.PIF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PLT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.PLT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PLT3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.PLT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PTF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.PTF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PUCHI 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.PUCHI -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAP21 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.RAP21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.Rap210 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.Rap210 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAP211 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.RAP211 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAP212 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.RAP212 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAP26 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.RAP26 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAV1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.RAV1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.REM16 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.REM16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.REM19 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.REM19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RKD2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.RKD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RRTF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.RRTF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RVE1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.RVE1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SGR5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SGR5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SHN3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SHN3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SMB 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SMB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SND2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SND2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SND3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SND3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SOL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SOL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SPL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL11 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SPL11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL13 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SPL13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL14 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SPL14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL15 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SPL15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SPL3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SPL5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL9 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SPL9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SRS7 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SRS7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.STOP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.STOP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.STZ 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.STZ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SVP 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.SVP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TBP3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TBP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TCP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP14 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TCP14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP16 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TCP16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP17 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TCP17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP20 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TCP20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP24 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TCP24 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TCP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP7 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TCP7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TCX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TF3A 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TF3A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TGA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA10 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TGA10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TGA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TGA3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TGA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TGA5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA6 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TGA6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA9 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TGA9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TINY 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TINY -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TRP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TRP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TRP2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TRP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TSO1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.TSO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.U2AF35B 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.U2AF35B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VIP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.VIP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.VND1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.VND2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.VND3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND4 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.VND4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND6 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.VND6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VRN1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.VRN1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WIP5 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WIP5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WLIM2A 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WLIM2A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WOX11 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WOX11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY11 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY14 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY15 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY17 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY18 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY20 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY21 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY22 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY24 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY24 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY25 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY25 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY26 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY26 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY27 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY27 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY28 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY28 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY29 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY29 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY3 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY30 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY30 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY31 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY31 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY33 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY33 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY40 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY42 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY42 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY43 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY43 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY45 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY45 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY46 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY46 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY47 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY47 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY50 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY50 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY55 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY55 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY59 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY59 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY6 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY65 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY65 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY7 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY70 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY70 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY71 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY71 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY75 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY75 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY8 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WRKY8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WUS1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.WUS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ZIM 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ZIM -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ZML1 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ZML1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ZML2 2 3 4 A SMAC-seq-resolution-motifs-m6A.ArabidopsisDAPv1.ZML2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(A3-3)_(Mus_musculus)_(DBD_0.56) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(A3-3)_(Mus_musculus)_(DBD_0.56) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ab 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ab -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.abd-A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.abd-A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Abd-B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Abd-B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ac 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ac -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Adf1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Adf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Aef1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Aef1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.amos 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.amos -minWidth 10
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python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.aop 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.aop -minWidth 10
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python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ara 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ara -minWidth 10
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python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Atf-2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Atf-2 -minWidth 10
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python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bab1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.bab1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bap 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.bap -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.BEAF-32 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.BEAF-32 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Bgb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Bgb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.B-H1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.B-H1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.B-H2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.B-H2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bigmax 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.bigmax -minWidth 10
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python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(bi)_(Nasonia_vitripennis)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(bi)_(Nasonia_vitripennis)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Blimp-1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Blimp-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bowl 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.bowl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.br 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.br -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.brk 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.brk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bsh 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.bsh -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(bs)_(Homo_sapiens)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(bs)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.btd 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.btd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Bteb2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Bteb2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.btn 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.btn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.byn 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.byn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.C15 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.C15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.cad 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.cad -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.cato 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.cato -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Cf2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Cf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG10267 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG10267 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG10904 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG10904 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG11071 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG11071 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG11085 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG11085 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG11152)_(Homo_sapiens)_(DBD_0.50) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(CG11152)_(Homo_sapiens)_(DBD_0.50) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG11504 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG11504 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG11617 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG11617 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG12155 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG12155 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG12605 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG12605 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG12768 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG12768 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG13424 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG13424 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG13897 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG13897 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG14962 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG14962 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG15601 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG15601 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG15696 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG15696 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG17181 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG17181 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG18599 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG18599 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG3065 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG3065 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG31670 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG31670 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG31782 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG31782 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG32105 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG32105 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG32532 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG32532 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG32830 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG32830 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG33557 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG33557 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG3407 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG3407 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG34340)_(Homo_sapiens)_(DBD_0.93) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(CG34340)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG34367)_(Mus_musculus)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(CG34367)_(Mus_musculus)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG3838 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG3838 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG3919 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG3919 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG42234 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG42234 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG4328 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG4328 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG4360 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG4360 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG4404 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG4404 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG4854 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG4854 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG5180 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG5180 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG5669 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG5669 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG5953 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG5953 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG6272 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG6272 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG6276 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG6276 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG6905)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(CG6905)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7056 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG7056 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7368 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG7368 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7386 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG7386 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7745 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG7745 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG7786)_(Homo_sapiens)_(DBD_0.56) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(CG7786)_(Homo_sapiens)_(DBD_0.56) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7928 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG7928 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG8281 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG8281 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG8319 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG8319 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG8765 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG8765 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG9571)_(Mus_musculus)_(DBD_0.64) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(CG9571)_(Mus_musculus)_(DBD_0.64) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG9727)_(Mus_musculus)_(DBD_0.51) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(CG9727)_(Mus_musculus)_(DBD_0.51) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG9876 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CG9876 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ci 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ci -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Clk 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Clk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.crc 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.crc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CrebA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CrebA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CrebB-17A)_(Mus_musculus)_(DBD_0.79) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(CrebB-17A)_(Mus_musculus)_(DBD_0.79) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(croc)_(Homo_sapiens)_(DBD_0.92) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(croc)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.crol 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.crol -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.crp 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.crp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CTCF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.CTCF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.cwo 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.cwo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.cyc 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.cyc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.D 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.D -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.D19A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.D19A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.D19B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.D19B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.da 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.da -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(dan)_(Bombyx_mori)_(DBD_0.85) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(dan)_(Bombyx_mori)_(DBD_0.85) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.danr 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.danr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dfd 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Dfd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dimm 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.dimm -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dip3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Dip3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.disco 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.disco -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.disco-r 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.disco-r -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dl 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.dl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dll 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Dll -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dmrt99B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.dmrt99B -minWidth 10
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python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dpn 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.dpn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dr 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Dr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dref 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Dref -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dsf 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.dsf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dsx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.dsx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dve 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.dve -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dys 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.dys -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.E2f 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.E2f -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.E5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.E5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.EcR 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.EcR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.eg 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.eg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Eip74EF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Eip74EF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Eip75B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Eip75B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Eip93F 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Eip93F -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ems 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ems -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ERR 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ERR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.esg 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.esg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.E(spl) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.E(spl) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets21C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Ets21C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets65A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Ets65A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets96B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Ets96B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets97D 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Ets97D -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets98B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Ets98B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.eve 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.eve -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.exd 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.exd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.exex 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.exex -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(ey)_(Mus_musculus)_(DBD_0.89) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(ey)_(Mus_musculus)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0054031 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.FBgn0054031 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0261705 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.FBgn0261705 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0261930 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.FBgn0261930 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0262477 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.FBgn0262477 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0262582 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.FBgn0262582 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0262656 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.FBgn0262656 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0262975 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.FBgn0262975 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0263112 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.FBgn0263112 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0263118 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.FBgn0263118 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0263239 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.FBgn0263239 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0263240 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.FBgn0263240 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBpp0073832 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.FBpp0073832 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBpp0292044 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.FBpp0292044 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(fd59A)_(Homo_sapiens)_(DBD_0.89) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(fd59A)_(Homo_sapiens)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.fd64A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.fd64A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(fd96Ca)_(Mus_musculus)_(DBD_0.88) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(fd96Ca)_(Mus_musculus)_(DBD_0.88) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Fer1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Fer1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Fer2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Fer2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Fer3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Fer3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.fkh 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.fkh -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.foxo 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.foxo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.fru 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.fru -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ftz 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ftz -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ftz-f1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ftz-f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.GATAd 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.GATAd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.GATAe 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.GATAe -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.gcm2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.gcm2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.gl 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.gl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.grh 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.grh -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(grn)_(Homo_sapiens)_(DBD_0.93) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(grn)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Gsc 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Gsc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.gt 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.gt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.h 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.h -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(H15)_(Mus_musculus)_(DBD_0.69) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(H15)_(Mus_musculus)_(DBD_0.69) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hand 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Hand -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.hb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.hb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.her 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.her -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Her 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Her -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hey 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Hey -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HGTX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.HGTX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.hkb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.hkb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(HLH106)_(Homo_sapiens)_(DBD_0.80) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(HLH106)_(Homo_sapiens)_(DBD_0.80) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(HLH3B)_(Homo_sapiens)_(DBD_0.81) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(HLH3B)_(Homo_sapiens)_(DBD_0.81) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLH4C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.HLH4C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLH54F 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.HLH54F -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHm3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.HLHm3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHm5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.HLHm5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHm7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.HLHm7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHmbeta 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.HLHmbeta -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHmdelta 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.HLHmdelta -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHmgamma 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.HLHmgamma -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hmx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Hmx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hnf4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Hnf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Hr38)_(Homo_sapiens)_(DBD_0.90) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(Hr38)_(Homo_sapiens)_(DBD_0.90) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Hr4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr46 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Hr46 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr51 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Hr51 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr78 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Hr78 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr83 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Hr83 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hsf 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Hsf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ind 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ind -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.inv 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.inv -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.jigr1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.jigr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.jim 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.jim -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Jra 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Jra -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.kay 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.kay -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ken 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ken -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.klu 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.klu -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.kni 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.kni -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.knrl 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.knrl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Kr 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Kr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.l(1)sc 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.l(1)sc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.l(3)neo38 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.l(3)neo38 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Lag1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Lag1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Lim3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Lim3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.lmd 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.lmd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.lola 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.lola -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.luna 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.luna -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(lz)_(Mus_musculus)_(DBD_0.71) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(lz)_(Mus_musculus)_(DBD_0.71) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mad 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Mad -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Max 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Max -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Med 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Med -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mef2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Mef2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mes2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Mes2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Met 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Met -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mio 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Mio -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(mip120)_(Drosophila_yakuba)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(mip120)_(Drosophila_yakuba)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.mirr 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.mirr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Mnf)_(Mus_musculus)_(DBD_0.79) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(Mnf)_(Mus_musculus)_(DBD_0.79) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mnt 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Mnt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(mor)_(Homo_sapiens)_(DBD_0.89) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(mor)_(Homo_sapiens)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Myb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Myb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.nau 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.nau -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.net 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.net -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(NFAT)_(Gallus_gallus)_(DBD_0.58) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(NFAT)_(Gallus_gallus)_(DBD_0.58) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(NfI)_(Homo_sapiens)_(DBD_0.80) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(NfI)_(Homo_sapiens)_(DBD_0.80) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Nf-YA)_(Homo_sapiens)_(DBD_0.84) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(Nf-YA)_(Homo_sapiens)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.NK7.1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.NK7.1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.nub 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.nub -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.oc 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.oc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.odd 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.odd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.OdsH 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.OdsH -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Oli 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Oli -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.onecut 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.onecut -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.opa 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.opa -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Optix 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Optix -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(org-1)_(Mus_musculus)_(DBD_0.70) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(org-1)_(Mus_musculus)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.otp 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.otp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ovo 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ovo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pad 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.pad -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pan 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.pan -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Pdp1)_(Homo_sapiens)_(DBD_0.68) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(Pdp1)_(Homo_sapiens)_(DBD_0.68) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.peb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.peb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pfk 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.pfk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pho 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.pho -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.phol 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.phol -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pnr 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.pnr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pnt 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.pnt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Poxm 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Poxm -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Poxn 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Poxn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Pph13 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Pph13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(prd)_(Homo_sapiens)_(DBD_0.77) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(prd)_(Homo_sapiens)_(DBD_0.77) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ptx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Ptx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.repo 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.repo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.retn 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.retn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Rfx)_(Apis_mellifera)_(DBD_0.78) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(Rfx)_(Apis_mellifera)_(DBD_0.78) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.rib 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.rib -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.rn 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.rn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ro 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ro -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.run 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.run -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(RunxA)_(Homo_sapiens)_(DBD_0.73) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(RunxA)_(Homo_sapiens)_(DBD_0.73) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Rx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Rx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sage 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.sage -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sc 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.sc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Scr 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Scr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(scro)_(Homo_sapiens)_(DBD_0.93) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(scro)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.scrt 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.scrt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sd 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.sd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sens 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.sens -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sens-2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.sens-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.shn 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.shn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Side 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Side -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sim 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.sim -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sima 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.sima -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.slbo 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.slbo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.slou 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.slou -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.slp1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.slp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.slp2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.slp2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.so 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.so -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sob 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.sob -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Sox14 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Sox14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Sox15 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Sox15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Sox21a)_(Mus_musculus)_(DBD_0.93) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(Sox21a)_(Mus_musculus)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Sox21b)_(Mus_musculus)_(DBD_0.93) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(Sox21b)_(Mus_musculus)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Sp1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Sp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sqz 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.sqz -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sr 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.sr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.srp 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.srp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ss 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ss -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.STAT92E 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.STAT92E -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sug 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.sug -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Su(H) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Su(H) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.SU(HW) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.SU(HW) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sv 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.sv -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.svp 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.svp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tai 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.tai -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tap 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.tap -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Tbp)_(Homo_sapiens)_(DBD_0.90) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(Tbp)_(Homo_sapiens)_(DBD_0.90) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tgo 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.tgo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tin 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.tin -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tj 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.tj -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tll 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.tll -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(toy)_(Homo_sapiens)_(DBD_0.84) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(toy)_(Homo_sapiens)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Trl 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Trl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ttk 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.ttk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tup 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.tup -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.twi 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.twi -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ubx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Ubx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.unc-4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.unc-4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Usf 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Usf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.usp 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.usp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.vfl 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.vfl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.vri 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.vri -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Vsx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Vsx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Vsx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Vsx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.wor 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.wor -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Xrp1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.Xrp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(yps)_(Homo_sapiens)_(DBD_0.82) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.(yps)_(Homo_sapiens)_(DBD_0.82) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.z 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.z -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.zen 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.zen -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.zen2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Drosophila_melanogaster.zen2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.AC226150.2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.AC226150.2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.AHR 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.AHR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.AIRE 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.AIRE -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ALX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ALX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ALX3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ALX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ALX4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ALX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.AR 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.AR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ARID2)_(Saccharomyces_cerevisiae)_(DBD_0.26) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ARID2)_(Saccharomyces_cerevisiae)_(DBD_0.26) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARID3A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ARID3A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ARID3B)_(Mus_musculus)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ARID3B)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ARID3C)_(Mus_musculus)_(DBD_0.87) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ARID3C)_(Mus_musculus)_(DBD_0.87) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ARID5A)_(Mus_musculus)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ARID5A)_(Mus_musculus)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARID5B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ARID5B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARNT 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ARNT -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARNT2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ARNT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARNTL 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ARNTL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ARX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ASCL2)_(Mus_musculus)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ASCL2)_(Mus_musculus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ATF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ATF2)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ATF2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ATF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ATF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ATF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ATF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ATF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ATOH1)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ATOH1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ATOH8)_(Drosophila_melanogaster)_(DBD_0.70) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ATOH8)_(Drosophila_melanogaster)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BACH1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BACH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BACH2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BACH2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(BARHL1)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(BARHL1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BARHL2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BARHL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BARX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BARX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BARX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BARX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BATF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BATF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BATF3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BATF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(BBX)_(Mus_musculus)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(BBX)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BCL11A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BCL11A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BCL6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BCL6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BCL6B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BCL6B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHA15 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BHLHA15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE22 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BHLHE22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE23 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BHLHE23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE40 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BHLHE40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE41 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BHLHE41 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BPTF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BPTF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BRCA1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BRCA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BSX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.BSX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.C11orf9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.C11orf9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CBFB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CBFB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CDC5L 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CDC5L -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CDX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CDX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CDX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CDX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CEBPA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CEBPB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPD 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CEBPD -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPE 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CEBPE -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPG 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CEBPG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPZ 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CEBPZ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CENPB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CENPB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CGBP 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CGBP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(CIC)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(CIC)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CLOCK 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CLOCK -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CPEB1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CPEB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREB1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CREB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREB3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CREB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREB3L1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CREB3L1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(CREB3L2)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(CREB3L2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(CREB5)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(CREB5)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREM 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CREM -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CRX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CRX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CTCF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCFL 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CTCFL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CUX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CUX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CUX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CUX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CXXC1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.CXXC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DBP 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DBP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(DBX2)_(Mus_musculus)_(DBD_0.93) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(DBX2)_(Mus_musculus)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DDIT3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DDIT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DLX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DLX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DLX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DLX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DLX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DLX6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMBX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DMBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMRT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DMRT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMRT2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DMRT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMRT3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DMRT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMRTA2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DMRTA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(DMRTC2)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(DMRTC2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DNMT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DNMT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DPRX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DPRX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DRGX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DRGX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DUX4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DUX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DUXA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.DUXA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.E2F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.E2F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.E2F3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.E2F4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.E2F5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.E2F6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.E2F7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.E2F8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E4F1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.E4F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EBF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EGR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EGR2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EGR3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EGR4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EHF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EHF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ELF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ELF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ELF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ELF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ELF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELK1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ELK1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELK3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ELK3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELK4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ELK4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EMX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EMX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EMX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EMX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EN1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EN1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EN2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EN2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ENO1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ENO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ENSG00000229544)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ENSG00000229544)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ENSG00000235187)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ENSG00000235187)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ENSG00000250542)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ENSG00000250542)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EOMES 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EOMES -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EPAS1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EPAS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ERF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ERF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ERG 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ERG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ESR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESR2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ESR2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESRRA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ESRRA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESRRB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ESRRB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESRRG 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ESRRG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ESX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETS1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ETS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETS2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ETS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ETV1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ETV2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ETV3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ETV4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ETV5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ETV6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ETV7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EVX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EVX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EVX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.EVX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FERD3L)_(Drosophila_melanogaster)_(DBD_0.89) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(FERD3L)_(Drosophila_melanogaster)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FEV 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FEV -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FEZF1)_(Drosophila_melanogaster)_(DBD_0.91) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(FEZF1)_(Drosophila_melanogaster)_(DBD_0.91) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FIGLA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FIGLA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FLI1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FLI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOS 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOS -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOSB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOSB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOSL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOSL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOSL2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOSL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXA1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXA2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXA3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXA3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXB1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXB2)_(Mus_musculus)_(DBD_0.94) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(FOXB2)_(Mus_musculus)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXC1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXC2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXD1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXD2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXD3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXD3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXD4L2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXD4L2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXG1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXH1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXI1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXJ1)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(FOXJ1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXJ2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXJ2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXJ3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXJ3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXK1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXK1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXK2)_(Mus_musculus)_(DBD_0.90) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(FOXK2)_(Mus_musculus)_(DBD_0.90) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXL2)_(Mus_musculus)_(DBD_0.70) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(FOXL2)_(Mus_musculus)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXN3)_(Strongylocentrotus_purpuratus)_(DBD_0.44) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(FOXN3)_(Strongylocentrotus_purpuratus)_(DBD_0.44) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXO1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXO3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXO3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXO4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXO4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXO6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXO6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXP2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXP3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXQ1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FOXQ1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FUBP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.FUBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GABPA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GATA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GATA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GATA3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GATA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GATA5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GATA6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GBX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GBX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GBX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GCM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GCM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GCM2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GCM2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GFI1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GFI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GFI1B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GFI1B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLI1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GLI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLI2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GLI2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLI3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GLI3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLIS1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GLIS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLIS2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GLIS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLIS3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GLIS3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GMEB1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GMEB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GMEB2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GMEB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GRHL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GRHL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GSC 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GSC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GSC2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GSC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GSX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GSX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GSX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.GSX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HAND1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HAND1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HBP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HDX)_(Mus_musculus)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HDX)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HES1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HES1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HES2)_(Mus_musculus)_(DBD_0.83) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HES2)_(Mus_musculus)_(DBD_0.83) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HES5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HES5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HES7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HES7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HESX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HESX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HEY1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HEY1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HEY2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HEY2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HHEX)_(Caenorhabditis_elegans)_(DBD_0.77) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HHEX)_(Caenorhabditis_elegans)_(DBD_0.77) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIC1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HIC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIC2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HIC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIF1A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HIF1A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HINFP 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HINFP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIVEP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HIVEP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIVEP2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HIVEP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HLF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HLF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HLTF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HLTF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HLX)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HLX)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMBOX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HMBOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HMG20B)_(Mus_musculus)_(DBD_0.94) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HMG20B)_(Mus_musculus)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMGA1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HMGA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMGA2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HMGA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HMX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HMX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMX3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HMX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HNF1A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HNF1A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HNF1B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HNF1B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HNF4A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HNF4A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HNF4G 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HNF4G -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOMEZ 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOMEZ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXA11)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HOXA11)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA13 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXA13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXA3)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HOXA3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXA4)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HOXA4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXA5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXA6)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HOXA6)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXA7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXA9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB13 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXB13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXB4)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HOXB4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXB5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXB6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXB7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXB8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC10 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXC10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC11 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXC11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC12 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXC12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC13 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXC13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXC5)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HOXC5)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXC6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXC8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXC9)_(Mus_musculus)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HOXC9)_(Mus_musculus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD10 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXD10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD11 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXD11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD12 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXD12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD13 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXD13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXD1)_(Mus_musculus)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HOXD1)_(Mus_musculus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXD3)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(HOXD3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXD4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXD8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HOXD9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HSF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HSF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSF4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HSF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSFY2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.HSFY2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ID2)_(Mus_musculus)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ID2)_(Mus_musculus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ID4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ID4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.INSM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.INSM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.IRF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.IRF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.IRF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.IRF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.IRF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(IRF6)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(IRF6)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.IRF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.IRF8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.IRF9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(IRX1)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(IRX1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.IRX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(IRX4)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(IRX4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRX5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.IRX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ISL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ISL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ISL2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ISL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ISX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ISX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JDP2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.JDP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUN 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.JUN -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUNB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.JUNB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUND 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.JUND -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KDM2B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.KDM2B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.KLF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(KLF12)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(KLF12)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF13 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.KLF13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF14 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.KLF14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF15 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.KLF15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF16 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.KLF16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(KLF2)_(Mus_musculus)_(DBD_0.95) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(KLF2)_(Mus_musculus)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.KLF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.KLF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.KLF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.KLF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(KLF7)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(KLF7)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.KLF8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(KLF9)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(KLF9)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LBX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.LBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LBX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.LBX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LCOR)_(Meleagris_gallopavo)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(LCOR)_(Meleagris_gallopavo)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LEF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.LEF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LHX1)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(LHX1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LHX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.LHX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LHX3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.LHX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LHX4)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(LHX4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LHX5)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(LHX5)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LHX6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.LHX6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LHX8)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(LHX8)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LHX9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.LHX9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LIN54)_(Gallus_gallus)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(LIN54)_(Gallus_gallus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LMX1A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.LMX1A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LMX1B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.LMX1B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MAF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MAFA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MAFB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MAFF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFG 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MAFG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFK 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MAFK -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MAX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAZ 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MAZ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MBD2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MBD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MECOM 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MECOM -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MECP2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MECP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MEF2A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MEF2B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MEF2C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2D 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MEF2D -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEIS1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MEIS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEIS2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MEIS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEIS3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MEIS3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEOX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MEOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEOX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MEOX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MESP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MESP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MGA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MGA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MITF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MITF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MIXL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MIXL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MLL 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MLL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MLX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MLX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MLXIPL 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MLXIPL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(MLXIP)_(Mus_musculus)_(DBD_0.82) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(MLXIP)_(Mus_musculus)_(DBD_0.82) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MNT 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MNT -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MNX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MNX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MSC 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MSC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MSX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MSX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MSX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MSX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MTF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MTF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MXI1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MXI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MYB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYBL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MYBL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYBL2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MYBL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYC 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MYC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(MYCL1)_(Mus_musculus)_(DBD_0.66) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(MYCL1)_(Mus_musculus)_(DBD_0.66) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYCN 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MYCN -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(MYF5)_(Mus_musculus)_(DBD_0.90) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(MYF5)_(Mus_musculus)_(DBD_0.90) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYF6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MYF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYOD1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MYOD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYOG 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MYOG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(MYPOP)_(Mus_musculus)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(MYPOP)_(Mus_musculus)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MZF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.MZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NAIF1)_(Xenopus_tropicalis)_(DBD_0.71) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(NAIF1)_(Xenopus_tropicalis)_(DBD_0.71) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NANOG 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NANOG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NEUROD1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NEUROD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NEUROD2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NEUROD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NEUROG1)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(NEUROG1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NEUROG2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NEUROG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFAT5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFAT5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFATC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFATC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFATC3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFATC4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFE2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2L1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFE2L1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2L2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFE2L2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFIA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFIA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFIB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFIB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFIL3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFIL3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFIX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFIX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFKB1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFKB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFKB2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFKB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFYA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFYB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYC 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NFYC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NHLH1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NHLH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NHLH2)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(NHLH2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NKX1-1)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(NKX1-1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX2-1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NKX2-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX2-2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NKX2-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NKX2-3)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(NKX2-3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX2-5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NKX2-5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX2-8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NKX2-8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX3-1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NKX3-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX3-2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NKX3-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NKX6-1)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(NKX6-1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NOBOX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NOBOX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NOTO 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NOTO -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NPAS2)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(NPAS2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NPAS4)_(Drosophila_melanogaster)_(DBD_0.61) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(NPAS4)_(Drosophila_melanogaster)_(DBD_0.61) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR0B1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR0B1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1D1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR1D1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1H2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR1H2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1H4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR1H4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1I2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR1I2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1I3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR1I3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR2C1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR2C2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2E1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR2E1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2E3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR2E3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2F1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR2F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2F2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR2F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2F6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR2F6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR3C1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR3C1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR3C2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR3C2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR4A1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR4A1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR4A2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR4A2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR4A3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR4A3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR5A1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR5A1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR5A2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR5A2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR6A1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NR6A1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NRF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NRF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NRL 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.NRL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OLIG1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.OLIG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OLIG2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.OLIG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OLIG3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.OLIG3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ONECUT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ONECUT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ONECUT2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ONECUT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ONECUT3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ONECUT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(OSR1)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(OSR1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(OSR2)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(OSR2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(OTP)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(OTP)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OTX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.OTX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OTX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.OTX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OVOL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.OVOL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PAX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PAX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PAX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PAX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PAX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PAX6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PAX7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PAX8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PAX9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PBX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PBX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PBX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PBX3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PBX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PDX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PDX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PGR 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PGR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PHOX2A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PHOX2A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PHOX2B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PHOX2B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PITX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PITX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PITX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PITX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PITX3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PITX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PKNOX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PKNOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PKNOX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PKNOX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PLAG1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PLAG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PLAGL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PLAGL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU1F1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU1F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU2F1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU2F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU2F2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU2F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU2F3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU2F3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU3F1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU3F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU3F2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU3F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU3F3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU3F3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU3F4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU3F4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU4F1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU4F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU4F2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU4F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU4F3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU4F3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU5F1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU5F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU5F1B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU5F1B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU6F1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU6F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU6F2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.POU6F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PPARA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PPARA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PPARD 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PPARD -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PPARG 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PPARG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRDM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PRDM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRDM4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PRDM4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRKRIR 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PRKRIR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PROP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PROP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PROX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PROX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRRX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PRRX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRRX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PRRX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PTF1A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PTF1A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PURA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.PURA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RARA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RARA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RARB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RARB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RARG 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RARG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RAX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RAX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RAX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RAX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RBPJ 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RBPJ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REL 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.REL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RELA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RELB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REST 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.REST -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RFX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RFX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RFX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RFX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RFX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(RFX6)_(Mus_musculus)_(DBD_0.66) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(RFX6)_(Mus_musculus)_(DBD_0.66) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(RFX7)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(RFX7)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RHOXF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RHOXF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RORA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RORA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(RORB)_(Tetraodon_nigroviridis)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(RORB)_(Tetraodon_nigroviridis)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RORC 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RORC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RREB1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RREB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RUNX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RUNX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RUNX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RUNX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RUNX3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RUNX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RXRA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RXRA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RXRB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RXRB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RXRG 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.RXRG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SCRT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SCRT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SCRT2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SCRT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SHOX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SHOX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SHOX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SHOX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIM1)_(Drosophila_melanogaster)_(DBD_0.89) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SIM1)_(Drosophila_melanogaster)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX1)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SIX1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX2)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SIX2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX3)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SIX3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX4)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SIX4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SIX5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SIX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX6)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SIX6)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SMAD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SMAD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SMAD3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SMAD4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMARCC1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SMARCC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMARCC2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SMARCC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SNAI1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SNAI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SNAI2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SNAI2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SNAI3)_(Mus_musculus)_(DBD_0.75) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SNAI3)_(Mus_musculus)_(DBD_0.75) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOHLH2)_(Mus_musculus)_(DBD_0.84) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SOHLH2)_(Mus_musculus)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX10 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SOX10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX11)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SOX11)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX12)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SOX12)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX13 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SOX13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX14 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SOX14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX15 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SOX15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX17 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SOX17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX18 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SOX18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX1)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SOX1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SOX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX21 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SOX21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX30)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SOX30)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX3)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SOX3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SOX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SOX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX6)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SOX6)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SOX7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SOX8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SOX9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SP5)_(Drosophila_melanogaster)_(DBD_0.93) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(SP5)_(Drosophila_melanogaster)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SP8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPDEF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SPDEF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPI1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SPI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPIB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SPIB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPIC 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SPIC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPZ1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SPZ1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SREBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SREBF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SRF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRY 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.SRY -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.STAT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.STAT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.STAT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.STAT4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT5A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.STAT5A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT5B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.STAT5B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.STAT6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.T 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.T -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TAL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TAL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBP 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TBP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TBR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TBX10)_(Mus_musculus)_(DBD_0.87) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(TBX10)_(Mus_musculus)_(DBD_0.87) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX15 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TBX15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX19 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TBX19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TBX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX20 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TBX20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX21 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TBX21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TBX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TBX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TBX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF12 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TCF12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TCF15)_(Drosophila_melanogaster)_(DBD_0.70) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(TCF15)_(Drosophila_melanogaster)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TCF21)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(TCF21)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TCF23)_(Mus_musculus)_(DBD_0.60) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(TCF23)_(Mus_musculus)_(DBD_0.60) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TCF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TCF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TCF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF7L1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TCF7L1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF7L2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TCF7L2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TCFL5)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(TCFL5)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TEAD1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TEAD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TEAD3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TEAD3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TEAD4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TEAD4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TEF 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TEF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TERF2)_(Mus_musculus)_(DBD_0.92) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(TERF2)_(Mus_musculus)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TET1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TET1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP2A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TFAP2A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP2B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TFAP2B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP2C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TFAP2C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP2D 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TFAP2D -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TFAP2E)_(Mus_musculus)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(TFAP2E)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TFAP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFCP2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TFCP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TFCP2L1)_(Mus_musculus)_(DBD_0.95) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(TFCP2L1)_(Mus_musculus)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFDP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TFDP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFE3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TFE3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFEB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TFEB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFEC 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TFEC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TGIF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TGIF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TGIF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TGIF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TGIF2LX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TGIF2LX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.THAP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.THAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.THRA 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.THRA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.THRB 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.THRB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TLX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TLX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TLX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TLX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TP53 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TP53 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TP63 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TP63 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TP73 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TP73 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TWIST1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.TWIST1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TWIST2)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(TWIST2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.UBP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.UBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.UNCX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.UNCX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.USF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.USF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VAX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.VAX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VAX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.VAX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VDR 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.VDR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VENTX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.VENTX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VSX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.VSX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VSX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.VSX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(VTN)_(Mus_musculus)_(DBD_0.79) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(VTN)_(Mus_musculus)_(DBD_0.79) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.WT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.WT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.XBP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.XBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YBX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.YBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.YY1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.YY2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBED1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZBED1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZBTB12)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZBTB12)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZBTB1)_(Mus_musculus)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZBTB1)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB33 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZBTB33 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZBTB3)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZBTB3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZBTB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB49 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZBTB49 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZBTB6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB7A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZBTB7A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB7B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZBTB7B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB7C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZBTB7C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZEB1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZEB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZFHX2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZFHX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZFHX3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZFHX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZFP161)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZFP161)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZFX 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZFX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZFY)_(Mus_musculus)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZFY)_(Mus_musculus)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZHX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZHX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZIC1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZIC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZIC2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZIC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZIC3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZIC3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZIC4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZIC4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZIC5)_(Mus_musculus)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZIC5)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZKSCAN1)_(Mus_musculus)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZKSCAN1)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZKSCAN3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZKSCAN3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF143 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF143 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF148 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF148 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF187)_(Mus_musculus)_(DBD_0.88) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZNF187)_(Mus_musculus)_(DBD_0.88) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF202)_(Mus_musculus)_(DBD_0.87) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZNF202)_(Mus_musculus)_(DBD_0.87) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF219 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF219 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF232 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF232 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF238 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF238 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF263 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF263 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF274 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF274 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF281)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZNF281)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF282 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF282 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF32)_(Mus_musculus)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZNF32)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF333 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF333 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF350 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF350 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF35)_(Mus_musculus)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZNF35)_(Mus_musculus)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF384 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF384 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF410 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF410 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF423 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF423 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF524 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF524 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF589 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF589 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF652)_(Mus_musculus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZNF652)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF683 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF683 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF691)_(Mus_musculus)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZNF691)_(Mus_musculus)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF713 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF713 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF740 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF740 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF75A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF75A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF76)_(Xenopus_laevis)_(DBD_0.84) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZNF76)_(Xenopus_laevis)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF784 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZNF784 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZSCAN10)_(Mus_musculus)_(DBD_0.82) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.(ZSCAN10)_(Mus_musculus)_(DBD_0.82) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZSCAN16 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZSCAN16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZSCAN4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Homo_sapiens.hg20.ZSCAN4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.9430076C15Rik 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.9430076C15Rik -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.AC189028.1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.AC189028.1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ahctf1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Ahctf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ahr)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Ahr)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Alx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Alx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Alx3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Alx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Alx4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Alx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ar 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Ar -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Arid2)_(Saccharomyces_cerevisiae)_(DBD_0.26) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Arid2)_(Saccharomyces_cerevisiae)_(DBD_0.26) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arid3a 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Arid3a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arid3b 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Arid3b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arid5a 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Arid5a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arid5b 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Arid5b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arnt 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Arnt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arnt2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Arnt2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arntl 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Arntl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Arx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ascl2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Ascl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Atf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Atf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Atf3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Atf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Atf5)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Atf5)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Atf6)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Atf6)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Atf7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atoh1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Atoh1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Atoh8)_(Drosophila_melanogaster)_(DBD_0.70) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Atoh8)_(Drosophila_melanogaster)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Bach1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Bach1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Bach2)_(Homo_sapiens)_(DBD_0.72) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Bach2)_(Homo_sapiens)_(DBD_0.72) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Barhl1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Barhl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Barhl2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Barhl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Barx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Barx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Barx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Barx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Batf3)_(Homo_sapiens)_(DBD_0.75) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Batf3)_(Homo_sapiens)_(DBD_0.75) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Batf)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Batf)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bbx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Bbx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Bcl11a)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Bcl11a)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bcl6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Bcl6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bcl6b 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Bcl6b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bhlha15 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Bhlha15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bhlhe22 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Bhlhe22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Bhlhe23)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Bhlhe23)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bhlhe40 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Bhlhe40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bhlhe41 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Bhlhe41 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bsx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Bsx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cdc5l)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Cdc5l)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cdx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Cdx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cdx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Cdx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cdx4)_(Homo_sapiens)_(DBD_0.91) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Cdx4)_(Homo_sapiens)_(DBD_0.91) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpa 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Cebpa -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Cebpb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpd 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Cebpd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpe 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Cebpe -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpg 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Cebpg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cenpb)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Cenpb)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cic 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Cic -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Clock 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Clock -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cphx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Cphx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Creb1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Creb1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Creb3)_(Homo_sapiens)_(DBD_0.82) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Creb3)_(Homo_sapiens)_(DBD_0.82) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Creb3l2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Creb3l2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Crebzf 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Crebzf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Crem 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Crem -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Crx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Crx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ctcf 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Ctcf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ctcfl)_(Homo_sapiens)_(DBD_0.81) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Ctcfl)_(Homo_sapiens)_(DBD_0.81) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cux1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Cux1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cux2)_(Homo_sapiens)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Cux2)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cxxc1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Cxxc1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dbp 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Dbp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dbx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Dbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dbx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Dbx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ddit3)_(Homo_sapiens)_(DBD_0.92) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Ddit3)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Dlx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Dlx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Dlx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Dlx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Dlx5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dlx6)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Dlx6)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dmbx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Dmbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrt1)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Dmrt1)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrt2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Dmrt2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrt3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Dmrt3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrta1)_(Drosophila_melanogaster)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Dmrta1)_(Drosophila_melanogaster)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrta2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Dmrta2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dmrtc2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Dmrtc2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dnajc21 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Dnajc21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dobox4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Dobox4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dux 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Dux -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Duxbl 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Duxbl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f1)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(E2f1)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.E2f2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.E2f2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.E2f3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.E2f3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(E2f4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f5)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(E2f5)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f6)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(E2f6)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f7)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(E2f7)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f8)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(E2f8)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E4f1)_(Homo_sapiens)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(E4f1)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ebf1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Ebf1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Egr1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Egr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Egr2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Egr2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Egr3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Egr3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Egr4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Egr4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ehf 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Ehf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Elf1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Elf1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elf2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Elf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elf3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Elf3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elf4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Elf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elf5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Elf5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elk1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Elk1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elk3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Elk3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elk4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Elk4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Emx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Emx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Emx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Emx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.En1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.En1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.En2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.En2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(ENSMUSG00000044690)_(Homo_sapiens)_(DBD_0.95) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(ENSMUSG00000044690)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.ENSMUSG00000079994 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.ENSMUSG00000079994 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(ENSMUSG00000090020)_(Strongylocentrotus_purpuratus)_(DBD_0.44) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(ENSMUSG00000090020)_(Strongylocentrotus_purpuratus)_(DBD_0.44) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Eomes 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Eomes -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Erf)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Erf)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Erg 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Erg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esr1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Esr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Esr2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Esr2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esrra 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Esrra -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esrrb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Esrrb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esrrg 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Esrrg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Esx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ets1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Ets1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ets2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Ets2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Etv1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Etv2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Etv2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Etv3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Etv4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Etv5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Etv6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Evx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Evx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Evx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Evx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ferd3l)_(Drosophila_melanogaster)_(DBD_0.89) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Ferd3l)_(Drosophila_melanogaster)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Fev)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Fev)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Fezf2)_(Drosophila_melanogaster)_(DBD_0.91) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Fezf2)_(Drosophila_melanogaster)_(DBD_0.91) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Figla 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Figla -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Fli1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Fli1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Fosb)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Fosb)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Fos)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Fos)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Fosl1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Fosl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Fosl2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Fosl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxa1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Foxa1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxa2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxa2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxa3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Foxa3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxb1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxb1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxc1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxc1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxc2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxc2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxd1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Foxd1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxd2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Foxd2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxd3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Foxd3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxf2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Foxf2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxg1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxg1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxh1)_(Homo_sapiens)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Foxh1)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxi1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Foxi1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxj1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxj1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxj2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxj2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxj3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxj3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxk1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxk1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxl1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxm1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Foxm1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxn3)_(Homo_sapiens)_(DBD_0.45) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Foxn3)_(Homo_sapiens)_(DBD_0.45) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxo1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxo1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxo3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxo3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxo4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxo4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxo6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxo6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxp1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxp2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Foxp2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxp4)_(Homo_sapiens)_(DBD_0.87) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Foxp4)_(Homo_sapiens)_(DBD_0.87) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxq1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Foxq1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxs1)_(Homo_sapiens)_(DBD_0.78) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Foxs1)_(Homo_sapiens)_(DBD_0.78) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gabpa 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gabpa -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gata1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gata2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Gata2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gata3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gata4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gata5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gata6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gbx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gbx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gbx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gcm1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gcm1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gcm2)_(Homo_sapiens)_(DBD_0.92) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Gcm2)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gfi1b 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gfi1b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gli1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Gli1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gli2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Gli2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gli3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gli3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Glis1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Glis1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Glis2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Glis2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Glis3)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Glis3)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm4830 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gm4830 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm4881 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gm4881 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm5294 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gm5294 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm5454 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gm5454 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm98 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gm98 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gmeb1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gmeb1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gmeb2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gmeb2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Grhl1)_(Homo_sapiens)_(DBD_0.84) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Grhl1)_(Homo_sapiens)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gsc 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gsc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gsc2)_(Homo_sapiens)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Gsc2)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gsx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Gsx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gsx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Gsx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hand1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hand1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hbp1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hbp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hdx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hdx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hes1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hes1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hes2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hes2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hes5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hes5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hes7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hes7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hesx1)_(Acipenser_baerii)_(DBD_0.79) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hesx1)_(Acipenser_baerii)_(DBD_0.79) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hey1)_(Homo_sapiens)_(DBD_0.95) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hey1)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hey2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hey2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hhex)_(Caenorhabditis_elegans)_(DBD_0.77) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hhex)_(Caenorhabditis_elegans)_(DBD_0.77) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hic1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hic1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hic2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hic2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hif3a)_(Homo_sapiens)_(DBD_0.74) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hif3a)_(Homo_sapiens)_(DBD_0.74) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hivep1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hivep1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hivep2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hivep2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hlf 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hlf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hlx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hlx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmbox1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hmbox1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmg20b 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hmg20b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hmga1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hmga1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmga2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hmga2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hmx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hmx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hmx3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hmx3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hnf1a 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hnf1a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hnf1b 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hnf1b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hnf4a 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hnf4a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hnf4g)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hnf4g)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Homez 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Homez -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxa1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa10 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxa10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa11 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxa11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa13 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxa13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxa2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxa3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxa4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxa5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxa6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxa7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxa9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb13 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxb13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hoxb1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hoxb1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxb3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxb4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxb5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxb6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxb7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxb8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hoxb9)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hoxb9)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc10 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxc10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc11 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxc11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc12 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxc12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc13 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxc13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxc4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxc6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxc8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxc9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxd1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd10 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxd10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd11 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxd11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hoxd12)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hoxd12)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd13 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxd13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxd3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hoxd4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hoxd4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxd8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Hoxd9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hsf1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hsf1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hsf2)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hsf2)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hsf4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hsf4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hsfy2)_(Homo_sapiens)_(DBD_0.71) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Hsfy2)_(Homo_sapiens)_(DBD_0.71) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Id2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Id2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Id4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Id4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Insm1)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Insm1)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.IRC900814 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.IRC900814 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Irf1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Irf1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Irf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Irf3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Irf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Irf5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Irf6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Irf7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Irf9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Irx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Irx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Irx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Irx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Irx5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Irx6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Isl1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Isl1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Isl2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Isl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Isx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Isx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Jdp2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Jdp2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Jun 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Jun -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Junb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Junb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Jund 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Jund -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Kdm2b)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Kdm2b)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Klf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf12 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Klf12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf13)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Klf13)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf14)_(Homo_sapiens)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Klf14)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf15)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Klf15)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf16)_(Homo_sapiens)_(DBD_0.92) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Klf16)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Klf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Klf3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Klf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf5)_(Homo_sapiens)_(DBD_0.95) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Klf5)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf6)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Klf6)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Klf7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Klf8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Klf9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Lbx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Lbx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lbx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Lbx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Lcor)_(Meleagris_gallopavo)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Lcor)_(Meleagris_gallopavo)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lef1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Lef1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Lhx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Lhx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Lhx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Lhx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Lhx5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Lhx6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Lhx8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Lhx9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Lin54)_(Gallus_gallus)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Lin54)_(Gallus_gallus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lmx1a 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Lmx1a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mafa)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Mafa)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mafb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mafb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mafg 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mafg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Maf)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Maf)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mafk 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mafk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Max 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Max -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Maz)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Maz)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mbd1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mbd1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mbd2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Mbd2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mbtps2)_(Homo_sapiens)_(DBD_0.92) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Mbtps2)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mecom 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mecom -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mecp2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mecp2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mef2a)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Mef2a)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mef2b)_(Homo_sapiens)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Mef2b)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mef2c)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Mef2c)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mef2d)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Mef2d)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meis1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Meis1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meis2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Meis2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meis3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Meis3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meox1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Meox1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meox2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Meox2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mesp2)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Mesp2)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mga)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Mga)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mitf 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mitf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mixl1)_(Homo_sapiens)_(DBD_0.95) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Mixl1)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mlx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mlx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mlxip 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mlxip -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mlxipl)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Mlxipl)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mnt 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mnt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mnx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mnx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Msc 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Msc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Msx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Msx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Msx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Msx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Msx3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Msx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mtf1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mtf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Myb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mybl1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mybl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mybl2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mybl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myc 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Myc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mycn 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mycn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myf6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Myf6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myod1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Myod1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myog 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Myog -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mypop 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mypop -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Myt1l)_(Caenorhabditis_elegans)_(DBD_0.76) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Myt1l)_(Caenorhabditis_elegans)_(DBD_0.76) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mzf1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Mzf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Naif1)_(Xenopus_tropicalis)_(DBD_0.71) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Naif1)_(Xenopus_tropicalis)_(DBD_0.71) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nanog 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nanog -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Neurod1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Neurod1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Neurod2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Neurod2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Neurog1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Neurog1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Neurog2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Neurog2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Neurog3)_(Homo_sapiens)_(DBD_0.91) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Neurog3)_(Homo_sapiens)_(DBD_0.91) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfat5)_(Gallus_gallus)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nfat5)_(Gallus_gallus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfatc1)_(Monodelphis_domestica)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nfatc1)_(Monodelphis_domestica)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfatc2)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nfatc2)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfatc3)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nfatc3)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfatc4)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nfatc4)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfe2)_(Homo_sapiens)_(DBD_0.95) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nfe2)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfe2l1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nfe2l1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nfe2l2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nfe2l2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfia)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nfia)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfib)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nfib)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nfil3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nfil3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfix)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nfix)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfkb1)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nfkb1)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfkb2)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nfkb2)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfya)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nfya)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nhlh1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nhlh1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nhlh2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nhlh2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx1-1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nkx1-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx1-2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nkx1-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nkx2-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nkx2-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nkx2-3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nkx2-4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nkx2-5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nkx2-6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nkx2-9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx3-1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nkx3-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx3-2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nkx3-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx6-1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nkx6-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nkx6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nkx6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nobox 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nobox -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Noto 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Noto -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(NP_001076596.1)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(NP_001076596.1)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Npas2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Npas2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Npas4)_(Drosophila_melanogaster)_(DBD_0.61) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Npas4)_(Drosophila_melanogaster)_(DBD_0.61) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1d1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nr1d1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1h2)_(Homo_sapiens)_(DBD_0.94) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nr1h2)_(Homo_sapiens)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1h4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nr1h4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1i2)_(Homo_sapiens)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nr1i2)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1i3)_(Homo_sapiens)_(DBD_0.89) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nr1i3)_(Homo_sapiens)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2c1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nr2c1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr2c2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nr2c2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2e1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nr2e1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2e3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nr2e3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2f1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nr2f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2f2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nr2f2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2f6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nr2f6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr3c1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nr3c1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr3c2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nr3c2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr4a1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nr4a1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr4a2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nr4a2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr4a3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nr4a3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr5a1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nr5a1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr5a2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Nr5a2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr6a1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nr6a1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nrl)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Nrl)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Obox1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Obox1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Obox3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Obox3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Obox5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Obox5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Obox6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Obox6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Olig1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Olig1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Olig2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Olig2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Olig3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Olig3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Onecut1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Onecut1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Onecut2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Onecut2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Onecut3)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Onecut3)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Osr1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Osr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Osr2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Osr2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Otp 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Otp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Otx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Otx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Otx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Otx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ovol1)_(Homo_sapiens)_(DBD_0.94) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Ovol1)_(Homo_sapiens)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ovol2)_(Caenorhabditis_elegans)_(DBD_0.70) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Ovol2)_(Caenorhabditis_elegans)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Pax1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pax2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pax2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Pax3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pax4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pax4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax5)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Pax5)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pax6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pax6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pax7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pax7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax8)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Pax8)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax9)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Pax9)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pbx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pbx2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Pbx2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pbx3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Pbx3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pdx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pdx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pgr)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Pgr)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Phf21a 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Phf21a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Phox2a 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Phox2a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Phox2b 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Phox2b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pit1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pit1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pitx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pitx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pitx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pitx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pitx3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pitx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pknox1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pknox1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pknox2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pknox2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Plag1)_(Homo_sapiens)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Plag1)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Plagl1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Plagl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou1f1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pou1f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou2f1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pou2f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou2f2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pou2f2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou2f3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pou2f3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou3f1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pou3f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou3f2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pou3f2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou3f3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pou3f3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou3f4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pou3f4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pou4f1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Pou4f1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pou4f2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Pou4f2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou4f3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pou4f3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou5f1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pou5f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou6f1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Pou6f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pou6f2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Pou6f2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ppara)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Ppara)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ppard)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Ppard)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pparg)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Pparg)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Prdm11 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Prdm11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Prdm1)_(Drosophila_melanogaster)_(DBD_0.73) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Prdm1)_(Drosophila_melanogaster)_(DBD_0.73) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Prdm4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Prdm4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Prkrir)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Prkrir)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Prop1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Prop1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Prrx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Prrx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Prrx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Prrx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Prrxl1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Prrxl1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ptf1a)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Ptf1a)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rara 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rara -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rarb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rarb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rarg 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rarg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rax 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rax -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rbpj)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Rbpj)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rela 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rela -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Relb)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Relb)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rel)_(Homo_sapiens)_(DBD_0.93) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Rel)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rest)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Rest)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rfx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rfx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rfx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rfx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rfx5)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Rfx5)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rfx7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rfx8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rhox11 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rhox11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rhox6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rhox6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rhox8)_(Rattus_norvegicus)_(DBD_0.95) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Rhox8)_(Rattus_norvegicus)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rora 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rora -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rorb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rorb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rorc)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Rorc)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rreb1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Rreb1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Runx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Runx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Runx2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Runx2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Runx3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Runx3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rxra 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rxra -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rxrb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rxrb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rxrg 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Rxrg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Scrt1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Scrt1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Scrt2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Scrt2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sebox 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sebox -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Setbp1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Setbp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sfpi1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sfpi1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Shox2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Shox2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sim1)_(Drosophila_melanogaster)_(DBD_0.89) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Sim1)_(Drosophila_melanogaster)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Six1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Six2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Six3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Six4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Six5)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Six5)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Six6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smad1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Smad1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smad2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Smad2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Smad3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Smad3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smad4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Smad4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smarcc1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Smarcc1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smarcc2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Smarcc2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Snai1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Snai1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Snai2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Snai2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sohlh2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sohlh2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox10 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox11 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox12 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox13 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox14 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox15 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox17 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox18 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox21 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox30 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox30 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sox8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sox9)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Sox9)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sp1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sp100 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sp100 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sp110 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sp110 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sp2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Sp2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sp3)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Sp3)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sp4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sp4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sp5)_(Drosophila_melanogaster)_(DBD_0.93) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Sp5)_(Drosophila_melanogaster)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sp8)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Sp8)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Spdef 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Spdef -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Spib)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Spib)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Spic 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Spic -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Spz1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Spz1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Srebf1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Srebf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Srebf2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Srebf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Srf 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Srf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sry 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Sry -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Stat1)_(Homo_sapiens)_(DBD_0.92) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Stat1)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Stat2)_(Homo_sapiens)_(DBD_0.81) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Stat2)_(Homo_sapiens)_(DBD_0.81) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Stat3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Stat3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Stat4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Stat4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Stat5a)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Stat5a)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Stat5b)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Stat5b)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Stat6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Stat6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.T 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.T -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tal1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Tal1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tbpl2)_(Homo_sapiens)_(DBD_0.85) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Tbpl2)_(Homo_sapiens)_(DBD_0.85) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbr1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tbr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tbx15)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Tbx15)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tbx19)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Tbx19)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tbx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx20 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tbx20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tbx21)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Tbx21)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tbx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tbx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tbx5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf12 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcf12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tcf15)_(Drosophila_melanogaster)_(DBD_0.70) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Tcf15)_(Drosophila_melanogaster)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf21 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcf21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcf3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcf7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf7l1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcf7l1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf7l2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcf7l2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap2a 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcfap2a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap2b 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcfap2b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap2c 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcfap2c -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tcfap2d)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Tcfap2d)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap2e 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcfap2e -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcfap4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tcfcp2)_(Gallus_gallus)_(DBD_0.95) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Tcfcp2)_(Gallus_gallus)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfcp2l1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcfcp2l1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfe3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcfe3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfeb 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcfeb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfec 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcfec -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfl5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tcfl5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tead3)_(Homo_sapiens)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Tead3)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tead4)_(Homo_sapiens)_(DBD_0.94) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Tead4)_(Homo_sapiens)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tef 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tef -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Terf2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Terf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tfdp1)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Tfdp1)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tgif1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tgif1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tgif2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tgif2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Thra)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Thra)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Thrb)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Thrb)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tlx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Tlx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tlx2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Tlx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Trp53 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Trp53 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Trp63)_(Homo_sapiens)_(DBD_0.86) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Trp63)_(Homo_sapiens)_(DBD_0.86) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Trp73 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Trp73 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Twist1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Twist1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Twist2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Twist2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ubp1)_(Homo_sapiens)_(DBD_0.93) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Ubp1)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Uncx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Uncx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Usf1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Usf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Usf2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Usf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Vax1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Vax1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Vax2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Vax2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Vdr 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Vdr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Vsx1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Vsx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Vsx2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Vsx2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Wt1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Wt1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Xbp1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Xbp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ybx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Ybx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Yy1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Yy1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zbtb1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zbtb1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zbtb12 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zbtb12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zbtb3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zbtb3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb49)_(Homo_sapiens)_(DBD_0.95) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zbtb49)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb4)_(Homo_sapiens)_(DBD_0.96) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zbtb4)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb6)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zbtb6)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb7a)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zbtb7a)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zbtb7b 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zbtb7b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb7c)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zbtb7c)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zeb1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zeb1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp105 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp105 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp110)_(Homo_sapiens)_(DBD_0.85) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zfp110)_(Homo_sapiens)_(DBD_0.85) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp128 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp128 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp143)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zfp143)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp148)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zfp148)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp161 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp161 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp187 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp187 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp202 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp202 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp219)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zfp219)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp238)_(Homo_sapiens)_(DBD_1.00) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zfp238)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp263 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp263 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp281 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp281 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp282)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zfp282)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp300 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp300 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp384)_(Homo_sapiens)_(DBD_0.99) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zfp384)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp410 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp410 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp523)_(Xenopus_laevis)_(DBD_0.84) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zfp523)_(Xenopus_laevis)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp524)_(Homo_sapiens)_(DBD_0.92) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zfp524)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp637 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp637 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp652 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp652 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp691 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp691 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp711 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp711 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp740 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfp740 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp784)_(Homo_sapiens)_(DBD_0.98) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zfp784)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp957)_(Arabidopsis_thaliana)_(DBD_0.40) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zfp957)_(Arabidopsis_thaliana)_(DBD_0.40) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfx 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zfx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zic1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zic1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zic2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zic2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zic3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zic3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zic4)_(Homo_sapiens)_(DBD_0.97) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zic4)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zic5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zic5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zkscan1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zkscan1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zkscan4)_(Homo_sapiens)_(DBD_0.85) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.(Zkscan4)_(Homo_sapiens)_(DBD_0.85) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zkscan5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zkscan5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zscan10 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zscan10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zscan20 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zscan20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zscan4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zscan4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zscan4c 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Mus_musculus.mm10.Zscan4c -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ABF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ABF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ABF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ABF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ACA1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ACA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ACE2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ACE2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ADR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ADR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.AFT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.AFT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARG5,6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ARG5,6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARG80 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ARG80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARG81 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ARG81 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARO80 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ARO80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ARR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.AZF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.AZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CAD1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.CAD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CAT8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.CAT8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CBF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.CBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CEP3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.CEP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CHA4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.CHA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CIN5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.CIN5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CRZ1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.CRZ1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CST6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.CST6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CUP2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.CUP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CUP9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.CUP9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DAL80 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.DAL80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DAL81 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.DAL81 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DAL82 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.DAL82 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DAT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.DAT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DOT6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.DOT6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ECM22 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ECM22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ECM23 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ECM23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.EDS1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.EDS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ERT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ERT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FHL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.FHL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FKH1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.FKH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FKH2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.FKH2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FYV5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.FYV5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FZF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.FZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GAL4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.GAL4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GAT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.GAT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GAT3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.GAT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GAT4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.GAT4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GCN4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.GCN4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GCR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.GCR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GCR2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.GCR2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GIS1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.GIS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GSM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.GSM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAC1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.HAC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAL9 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.HAL9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.HAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAP3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.HAP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAP4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.HAP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAP5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.HAP5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HCM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.HCM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HMRA1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.HMRA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HMRA2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.HMRA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HMS1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.HMS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HMS2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.HMS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HSF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.HSF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.IME1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.IME1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.IME4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.IME4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.INO2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.INO2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.INO4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.INO4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.IXR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.IXR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.KAR4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.KAR4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.LEU3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.LEU3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.LYS14 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.LYS14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MAC1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.MAC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MATALPHA1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.MATALPHA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MBP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.MBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MCM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.MCM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MET31 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.MET31 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MET32 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.MET32 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MET4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.MET4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MGA1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.MGA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MIG1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.MIG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MIG2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.MIG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MIG3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.MIG3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MSN1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.MSN1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MSN2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.MSN2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NDT80 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.NDT80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NHP10 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.NHP10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NHP6A 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.NHP6A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NHP6B 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.NHP6B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NRG1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.NRG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NRG2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.NRG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.OAF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.OAF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.OPI1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.OPI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ORC1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ORC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.(ORC2)_(Mus_musculus)_(DBD_0.69) 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.(ORC2)_(Mus_musculus)_(DBD_0.69) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PDC2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.PDC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PDR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.PDR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PDR3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.PDR3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PDR8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.PDR8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PHD1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.PHD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PHO4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.PHO4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PPR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.PPR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PUT3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.PUT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PZF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.PZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RAP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RCO1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RCO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RDR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RDR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RDS1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RDS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RDS2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RDS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.REB1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.REB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.REI1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.REI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RFX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RFX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RGT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RGT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RIM101 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RIM101 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RLM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RLM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RME1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RME1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ROX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ROX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RPH1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RPH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RPN4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RPN4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RSC3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RSC3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RSC30 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RSC30 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RSF2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RSF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RTG1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RTG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RTG3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.RTG3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SFL1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SFL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SFP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SFP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SIP4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SIP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SKN7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SKN7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SKO1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SKO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SMK1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SMK1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SMP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SMP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SNF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SNF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SNT2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SNT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SOK2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SOK2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SPT10 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SPT10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SPT15 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SPT15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SPT2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SPT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SPT23 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SPT23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SRD1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SRD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STB2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.STB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STB3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.STB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STB4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.STB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STB5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.STB5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STE12 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.STE12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.STP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STP2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.STP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STP3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.STP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STP4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.STP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SUA7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SUA7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SUM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SUM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SUT1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SUT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SUT2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SUT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SWI4 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SWI4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SWI5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.SWI5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TBF1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.TBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TBS1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.TBS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TEA1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.TEA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TEC1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.TEC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.THI2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.THI2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.THO2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.THO2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TOD6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.TOD6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TOS8 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.TOS8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TYE7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.TYE7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.UGA3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.UGA3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.UME1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.UME1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.UME6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.UME6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.UPC2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.UPC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.URC2 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.URC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.VHR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.VHR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.WAR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.WAR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.WTM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.WTM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.XBP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.XBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP3 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YAP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP5 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YAP5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP6 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YAP6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP7 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YAP7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YDR266C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YDR266C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YDR520C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YDR520C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YER130C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YER130C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YER184C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YER184C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YGR067C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YGR067C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YHP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YHP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YKL222C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YKL222C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YLL054C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YLL054C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YLR278C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YLR278C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YML081W 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YML081W -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YNR063W 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YNR063W -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YOX1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YPR013C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YPR013C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YPR015C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YPR015C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YPR022C 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YPR022C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YPR196W 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YPR196W -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YRM1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YRM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YRR1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.YRR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ZAP1 2 3 4 A SMAC-seq-resolution-motifs-m6A.CIS-BP-Saccharomyces_cerevisiae.ZAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.3XHMGBOX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.3XHMGBOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ABF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ABF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ABI5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ABI5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ABR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ABR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.Adof1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.Adof1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AGL13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AGL15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL16 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AGL16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL25 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AGL25 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL42 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AGL42 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AGL6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL63 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AGL63 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL95 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AGL95 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AIL7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AIL7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC004 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC004 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC005 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC005 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC011 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC011 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC013 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC013 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC016 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC016 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC017 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC017 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC020 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC020 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC028 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC028 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC034 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC034 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC038 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC038 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC042 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC042 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC045 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC045 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC046 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC046 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC047 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC047 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC050 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC050 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC053 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC053 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC055 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC055 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC057 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC057 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC058 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC058 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC062 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC062 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC070 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC070 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC071 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC071 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC075 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC075 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC079 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC079 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC083 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC083 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC087 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC087 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC092 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC092 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC094 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC094 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC096 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC096 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC103 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANAC103 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANL2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ANL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AREB3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AREB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ARF16 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ARF16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ARF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ARF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AS2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ASHR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ASHR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ASL18 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ASL18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G01250 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G01250 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G04880 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G04880 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G10720 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G10720 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G12630 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G12630 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g13300 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g13300 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g14580 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g14580 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G18960 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G18960 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g19000 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g19000 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G19040 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G19040 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g19210 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g19210 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G20910 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G20910 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g22810 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g22810 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G23810 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G23810 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G24250 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G24250 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g25550 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g25550 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G28160 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G28160 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g36060 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g36060 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G44830 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G44830 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G47655 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G47655 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g49010 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g49010 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G49560 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G49560 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g64620 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g64620 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G66420 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G66420 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g68670 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g68670 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G69570 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G69570 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g69690 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g69690 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g70910 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g70910 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G71450 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G71450 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g72010 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g72010 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G72740 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G72740 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g74370 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g74370 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g74840 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g74840 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g75490 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g75490 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g76110 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g76110 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G76870 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G76870 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G76880 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G76880 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G77200 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT1G77200 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g77640 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g77640 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g78700 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At1g78700 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g01060 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At2g01060 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G01818 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT2G01818 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g03500 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At2g03500 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G15740 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT2G15740 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G17410 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT2G17410 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G20110 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT2G20110 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G20400 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT2G20400 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G28810 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT2G28810 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G28920 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT2G28920 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G31460 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT2G31460 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G33550 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT2G33550 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g33710 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At2g33710 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g38090 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At2g38090 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G38300 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT2G38300 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G40260 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT2G40260 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g41835 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At2g41835 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g44940 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At2g44940 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g45680 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At2g45680 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g04030 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At3g04030 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g09600 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At3g09600 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G09735 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G09735 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G10030 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G10030 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G10113 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G10113 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G10580 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G10580 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g11280 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At3g11280 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G12130 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G12130 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g12730 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At3g12730 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G12910 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G12910 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g13040 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At3g13040 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g14180 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At3g14180 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G16280 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G16280 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g24120 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At3g24120 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G25990 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G25990 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G42860 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G42860 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g45610 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At3g45610 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G46070 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G46070 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G49930 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G49930 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G51470 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G51470 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G52440 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G52440 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G57600 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G57600 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G58630 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G58630 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G60490 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT3G60490 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g60580 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At3g60580 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G00250 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT4G00250 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g01280 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At4g01280 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G12670 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT4G12670 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g16750 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At4g16750 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G18450 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT4G18450 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g18890 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At4g18890 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G26030 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT4G26030 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G27900 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT4G27900 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g28140 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At4g28140 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g31060 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At4g31060 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g32800 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At4g32800 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g36780 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At4g36780 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G37180 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT4G37180 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g38000 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At4g38000 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G02460 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT5G02460 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g04390 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g04390 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G05550 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT5G05550 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g05790 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g05790 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g08330 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g08330 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g08520 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g08520 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g08750 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g08750 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G18090 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT5G18090 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g18450 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g18450 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g22890 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g22890 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G22990 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT5G22990 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G23930 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT5G23930 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g29000 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g29000 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G45580 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT5G45580 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g47390 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g47390 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G47660 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT5G47660 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g52660 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g52660 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G56840 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT5G56840 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g58900 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g58900 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G59990 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT5G59990 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G60130 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT5G60130 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G61620 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT5G61620 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g62940 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g62940 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G63260 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT5G63260 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g65130 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g65130 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g66730 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g66730 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G66940 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AT5G66940 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g67000 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.At5g67000 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATAF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATAF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AtGRF6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AtGRF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB18 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB20 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB21 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB23 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB24 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB24 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB25 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB25 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AtHB32 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AtHB32 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB33 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB33 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB34 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB34 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB40 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB53 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB53 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATHB7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AtIDD11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AtIDD11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AtNLP4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AtNLP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATY13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATY13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATY19 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ATY19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AZF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.AZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BAM8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.BAM8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BBX31 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.BBX31 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bHLH10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH104 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bHLH104 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH122 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bHLH122 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH130 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bHLH130 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH157 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bHLH157 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH18 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bHLH18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH28 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bHLH28 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH31 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bHLH31 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH34 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bHLH34 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH69 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bHLH69 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH74 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bHLH74 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH77 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bHLH77 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH80 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bHLH80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BIM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.BIM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BIM2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.BIM2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BIM3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.BIM3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BOS1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.BOS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BPC1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.BPC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BPC5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.BPC5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BPC6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.BPC6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP16 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bZIP16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP18 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bZIP18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP28 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bZIP28 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bZIP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP42 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bZIP42 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP43 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bZIP43 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP44 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bZIP44 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP48 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bZIP48 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP50 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bZIP50 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP52 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bZIP52 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP53 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bZIP53 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP68 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bZIP68 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP69 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.bZIP69 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BZR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.BZR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CAMTA1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CAMTA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CAMTA5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CAMTA5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CBF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CBF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CBF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CBF3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CBF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CBF4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CBF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CDF3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CDF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CDM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CDM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CEJ1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CEJ1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.COG1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.COG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CRC 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CRC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CRF10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CRF10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CRF4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CRF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CUC1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CUC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CUC2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CUC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CUC3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.CUC3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DAG2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.DAG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DDF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.DDF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DDF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.DDF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEAR2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.DEAR2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEAR3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.DEAR3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEAR5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.DEAR5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.DEL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEL2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.DEL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.dof24 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.dof24 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.dof42 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.dof42 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.dof43 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.dof43 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.dof45 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.dof45 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DREB19 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.DREB19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DREB2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.DREB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DREB26 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.DREB26 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.E2FA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.E2FA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.E2FC 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.E2FC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EDT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.EDT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EIL3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.EIL3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EIN3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.EIN3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EMB1789 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.EMB1789 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EPR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.EPR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF104 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF104 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF105 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF105 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF115 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF115 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF38 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF38 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF48 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF48 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF73 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF73 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ERF9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ESE1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ESE1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ESE3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ESE3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.FAR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.FAR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.FHA2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.FHA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.FRS9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.FRS9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.FUS3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.FUS3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GATA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GATA11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA12 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GATA12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA14 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GATA14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GATA15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA16 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GATA16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA19 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GATA19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA20 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GATA20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GATA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GATA6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GBF3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GBF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GBF5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GBF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GBF6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GBF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GRF9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GRF9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GT2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GT3a 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GT3a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GTL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.GTL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAP3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HAP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HAT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAT2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HAT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAT22 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HAT22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAT5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HAT5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HDG1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HDG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HDG7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HDG7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSF21 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HSF21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSF3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HSF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSF6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HSF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSF7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HSF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFA1E 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HSFA1E -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFA6A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HSFA6A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFA6B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HSFA6B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFB3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HSFB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFB4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HSFB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFC1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HSFC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HY5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.HY5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.IDD2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.IDD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.IDD4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.IDD4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.IDD5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.IDD5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.IDD7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.IDD7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.JGL 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.JGL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.JKD 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.JKD -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.KAN2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.KAN2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.LBD13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD18 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.LBD18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD19 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.LBD19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.LBD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD23 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.LBD23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LCL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.LCL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LEP 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.LEP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LHY1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.LHY1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LMI1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.LMI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LOB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.LOB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MGP 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MGP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MP 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MS188 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MS188 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB101 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB101 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB105 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB105 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB107 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB107 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB113 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB113 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB116 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB116 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB118 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB118 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB119 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB119 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB121 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB121 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB17 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB23 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB27 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB27 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB30 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB30 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB33 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB33 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB39 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB39 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB3R1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB3R1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB3R4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB3R4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB3R5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB3R5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB40 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB41 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB41 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB43 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB43 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB44 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB44 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB49 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB49 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB51 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB51 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB52 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB52 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB55 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB55 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB56 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB56 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB57 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB57 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB58 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB58 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB60 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB60 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB61 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB61 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB62 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB62 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB63 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB63 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB65 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB65 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB67 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB67 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB70 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB70 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB73 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB73 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB74 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB74 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB77 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB77 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB81 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB81 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB83 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB83 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB88 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB88 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB92 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB92 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB93 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB93 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB94 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB94 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB96 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB96 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB98 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB98 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB99 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.MYB99 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NAC2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.NAC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NAM 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.NAM -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NAP 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.NAP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NFYB4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.NFYB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NGA4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.NGA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NLP7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.NLP7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NST1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.NST1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NTL8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.NTL8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NTM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.NTM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NTM2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.NTM2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NUC 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.NUC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.OBP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.OBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.OBP3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.OBP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.OBP4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.OBP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PDF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.PDF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PHV 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.PHV -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PIF7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.PIF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PLT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.PLT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PLT3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.PLT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PTF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.PTF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PUCHI 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.PUCHI -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAP21 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.RAP21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.Rap210 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.Rap210 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAP211 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.RAP211 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAP212 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.RAP212 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAP26 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.RAP26 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAV1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.RAV1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.REM16 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.REM16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.REM19 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.REM19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RKD2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.RKD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RRTF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.RRTF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RVE1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.RVE1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SGR5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SGR5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SHN3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SHN3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SMB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SMB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SND2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SND2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SND3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SND3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SOL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SOL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SPL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SPL11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SPL13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL14 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SPL14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SPL15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SPL3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SPL5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SPL9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SRS7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SRS7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.STOP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.STOP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.STZ 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.STZ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SVP 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.SVP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TBP3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TBP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TCP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP14 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TCP14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP16 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TCP16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP17 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TCP17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP20 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TCP20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP24 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TCP24 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TCP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TCP7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TCX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TF3A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TF3A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TGA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TGA10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TGA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TGA3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TGA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TGA5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TGA6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TGA9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TINY 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TINY -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TRP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TRP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TRP2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TRP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TSO1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.TSO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.U2AF35B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.U2AF35B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VIP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.VIP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.VND1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.VND2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.VND3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.VND4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.VND6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VRN1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.VRN1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WIP5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WIP5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WLIM2A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WLIM2A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WOX11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WOX11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY14 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY17 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY18 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY20 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY21 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY22 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY24 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY24 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY25 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY25 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY26 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY26 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY27 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY27 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY28 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY28 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY29 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY29 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY30 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY30 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY31 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY31 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY33 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY33 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY40 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY42 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY42 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY43 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY43 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY45 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY45 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY46 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY46 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY47 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY47 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY50 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY50 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY55 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY55 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY59 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY59 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY65 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY65 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY70 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY70 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY71 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY71 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY75 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY75 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WRKY8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WUS1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.WUS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ZIM 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ZIM -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ZML1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ZML1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ZML2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.ArabidopsisDAPv1.ZML2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(A3-3)_(Mus_musculus)_(DBD_0.56) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(A3-3)_(Mus_musculus)_(DBD_0.56) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ab 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ab -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.abd-A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.abd-A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Abd-B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Abd-B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ac 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ac -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Adf1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Adf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Aef1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Aef1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.amos 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.amos -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Antp 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Antp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.aop 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.aop -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ap 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ap -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ara 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ara -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ase 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ase -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Atf-2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Atf-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Atf6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Atf6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ato 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ato -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Awh 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Awh -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bab1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.bab1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bap 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.bap -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.BEAF-32 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.BEAF-32 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Bgb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Bgb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.B-H1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.B-H1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.B-H2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.B-H2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bigmax 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.bigmax -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bin 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.bin -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(bi)_(Nasonia_vitripennis)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(bi)_(Nasonia_vitripennis)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Blimp-1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Blimp-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bowl 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.bowl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.br 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.br -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.brk 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.brk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bsh 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.bsh -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(bs)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(bs)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.btd 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.btd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Bteb2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Bteb2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.btn 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.btn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.byn 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.byn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.C15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.C15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.cad 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.cad -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.cato 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.cato -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Cf2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Cf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG10267 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG10267 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG10904 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG10904 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG11071 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG11071 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG11085 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG11085 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG11152)_(Homo_sapiens)_(DBD_0.50) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(CG11152)_(Homo_sapiens)_(DBD_0.50) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG11504 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG11504 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG11617 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG11617 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG12155 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG12155 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG12605 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG12605 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG12768 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG12768 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG13424 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG13424 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG13897 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG13897 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG14962 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG14962 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG15601 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG15601 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG15696 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG15696 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG17181 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG17181 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG18599 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG18599 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG3065 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG3065 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG31670 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG31670 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG31782 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG31782 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG32105 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG32105 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG32532 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG32532 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG32830 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG32830 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG33557 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG33557 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG3407 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG3407 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG34340)_(Homo_sapiens)_(DBD_0.93) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(CG34340)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG34367)_(Mus_musculus)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(CG34367)_(Mus_musculus)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG3838 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG3838 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG3919 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG3919 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG42234 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG42234 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG4328 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG4328 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG4360 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG4360 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG4404 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG4404 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG4854 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG4854 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG5180 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG5180 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG5669 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG5669 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG5953 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG5953 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG6272 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG6272 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG6276 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG6276 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG6905)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(CG6905)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7056 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG7056 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7368 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG7368 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7386 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG7386 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7745 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG7745 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG7786)_(Homo_sapiens)_(DBD_0.56) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(CG7786)_(Homo_sapiens)_(DBD_0.56) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7928 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG7928 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG8281 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG8281 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG8319 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG8319 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG8765 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG8765 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG9571)_(Mus_musculus)_(DBD_0.64) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(CG9571)_(Mus_musculus)_(DBD_0.64) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG9727)_(Mus_musculus)_(DBD_0.51) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(CG9727)_(Mus_musculus)_(DBD_0.51) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG9876 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CG9876 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ci 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ci -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Clk 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Clk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.crc 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.crc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CrebA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CrebA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CrebB-17A)_(Mus_musculus)_(DBD_0.79) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(CrebB-17A)_(Mus_musculus)_(DBD_0.79) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(croc)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(croc)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.crol 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.crol -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.crp 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.crp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CTCF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.CTCF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.cwo 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.cwo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.cyc 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.cyc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.D 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.D -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.D19A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.D19A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.D19B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.D19B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.da 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.da -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(dan)_(Bombyx_mori)_(DBD_0.85) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(dan)_(Bombyx_mori)_(DBD_0.85) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.danr 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.danr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dfd 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Dfd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dimm 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.dimm -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dip3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Dip3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.disco 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.disco -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.disco-r 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.disco-r -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dl 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.dl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dll 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Dll -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dmrt99B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.dmrt99B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Doc2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Doc2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dpn 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.dpn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dr 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Dr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dref 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Dref -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dsf 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.dsf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dsx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.dsx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dve 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.dve -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dys 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.dys -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.E2f 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.E2f -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.E5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.E5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.EcR 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.EcR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.eg 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.eg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Eip74EF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Eip74EF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Eip75B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Eip75B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Eip93F 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Eip93F -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ems 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ems -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ERR 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ERR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.esg 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.esg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.E(spl) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.E(spl) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets21C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Ets21C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets65A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Ets65A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets96B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Ets96B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets97D 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Ets97D -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets98B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Ets98B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.eve 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.eve -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.exd 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.exd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.exex 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.exex -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(ey)_(Mus_musculus)_(DBD_0.89) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(ey)_(Mus_musculus)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0054031 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.FBgn0054031 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0261705 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.FBgn0261705 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0261930 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.FBgn0261930 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0262477 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.FBgn0262477 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0262582 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.FBgn0262582 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0262656 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.FBgn0262656 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0262975 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.FBgn0262975 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0263112 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.FBgn0263112 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0263118 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.FBgn0263118 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0263239 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.FBgn0263239 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0263240 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.FBgn0263240 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBpp0073832 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.FBpp0073832 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBpp0292044 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.FBpp0292044 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(fd59A)_(Homo_sapiens)_(DBD_0.89) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(fd59A)_(Homo_sapiens)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.fd64A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.fd64A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(fd96Ca)_(Mus_musculus)_(DBD_0.88) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(fd96Ca)_(Mus_musculus)_(DBD_0.88) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Fer1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Fer1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Fer2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Fer2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Fer3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Fer3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.fkh 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.fkh -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.foxo 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.foxo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.fru 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.fru -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ftz 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ftz -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ftz-f1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ftz-f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.GATAd 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.GATAd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.GATAe 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.GATAe -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.gcm2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.gcm2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.gl 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.gl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.grh 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.grh -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(grn)_(Homo_sapiens)_(DBD_0.93) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(grn)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Gsc 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Gsc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.gt 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.gt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.h 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.h -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(H15)_(Mus_musculus)_(DBD_0.69) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(H15)_(Mus_musculus)_(DBD_0.69) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hand 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Hand -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.hb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.hb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.her 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.her -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Her 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Her -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hey 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Hey -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HGTX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.HGTX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.hkb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.hkb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(HLH106)_(Homo_sapiens)_(DBD_0.80) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(HLH106)_(Homo_sapiens)_(DBD_0.80) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(HLH3B)_(Homo_sapiens)_(DBD_0.81) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(HLH3B)_(Homo_sapiens)_(DBD_0.81) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLH4C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.HLH4C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLH54F 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.HLH54F -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHm3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.HLHm3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHm5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.HLHm5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHm7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.HLHm7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHmbeta 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.HLHmbeta -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHmdelta 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.HLHmdelta -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHmgamma 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.HLHmgamma -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hmx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Hmx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hnf4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Hnf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Hr38)_(Homo_sapiens)_(DBD_0.90) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(Hr38)_(Homo_sapiens)_(DBD_0.90) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Hr4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr46 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Hr46 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr51 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Hr51 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr78 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Hr78 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr83 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Hr83 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hsf 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Hsf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ind 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ind -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.inv 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.inv -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.jigr1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.jigr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.jim 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.jim -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Jra 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Jra -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.kay 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.kay -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ken 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ken -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.klu 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.klu -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.kni 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.kni -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.knrl 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.knrl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Kr 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Kr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.l(1)sc 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.l(1)sc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.l(3)neo38 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.l(3)neo38 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Lag1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Lag1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Lim3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Lim3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.lmd 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.lmd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.lola 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.lola -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.luna 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.luna -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(lz)_(Mus_musculus)_(DBD_0.71) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(lz)_(Mus_musculus)_(DBD_0.71) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mad 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Mad -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Max 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Max -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Med 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Med -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mef2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Mef2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mes2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Mes2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Met 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Met -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mio 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Mio -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(mip120)_(Drosophila_yakuba)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(mip120)_(Drosophila_yakuba)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.mirr 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.mirr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Mnf)_(Mus_musculus)_(DBD_0.79) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(Mnf)_(Mus_musculus)_(DBD_0.79) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mnt 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Mnt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(mor)_(Homo_sapiens)_(DBD_0.89) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(mor)_(Homo_sapiens)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Myb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Myb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.nau 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.nau -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.net 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.net -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(NFAT)_(Gallus_gallus)_(DBD_0.58) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(NFAT)_(Gallus_gallus)_(DBD_0.58) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(NfI)_(Homo_sapiens)_(DBD_0.80) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(NfI)_(Homo_sapiens)_(DBD_0.80) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Nf-YA)_(Homo_sapiens)_(DBD_0.84) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(Nf-YA)_(Homo_sapiens)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.NK7.1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.NK7.1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.nub 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.nub -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.oc 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.oc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.odd 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.odd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.OdsH 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.OdsH -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Oli 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Oli -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.onecut 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.onecut -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.opa 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.opa -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Optix 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Optix -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(org-1)_(Mus_musculus)_(DBD_0.70) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(org-1)_(Mus_musculus)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.otp 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.otp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ovo 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ovo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pad 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.pad -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pan 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.pan -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Pdp1)_(Homo_sapiens)_(DBD_0.68) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(Pdp1)_(Homo_sapiens)_(DBD_0.68) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.peb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.peb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pfk 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.pfk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pho 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.pho -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.phol 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.phol -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pnr 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.pnr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pnt 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.pnt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Poxm 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Poxm -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Poxn 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Poxn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Pph13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Pph13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(prd)_(Homo_sapiens)_(DBD_0.77) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(prd)_(Homo_sapiens)_(DBD_0.77) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ptx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Ptx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.repo 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.repo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.retn 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.retn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Rfx)_(Apis_mellifera)_(DBD_0.78) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(Rfx)_(Apis_mellifera)_(DBD_0.78) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.rib 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.rib -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.rn 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.rn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ro 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ro -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.run 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.run -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(RunxA)_(Homo_sapiens)_(DBD_0.73) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(RunxA)_(Homo_sapiens)_(DBD_0.73) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Rx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Rx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sage 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.sage -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sc 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.sc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Scr 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Scr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(scro)_(Homo_sapiens)_(DBD_0.93) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(scro)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.scrt 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.scrt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sd 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.sd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sens 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.sens -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sens-2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.sens-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.shn 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.shn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Side 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Side -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sim 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.sim -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sima 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.sima -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.slbo 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.slbo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.slou 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.slou -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.slp1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.slp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.slp2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.slp2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.so 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.so -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sob 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.sob -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Sox14 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Sox14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Sox15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Sox15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Sox21a)_(Mus_musculus)_(DBD_0.93) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(Sox21a)_(Mus_musculus)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Sox21b)_(Mus_musculus)_(DBD_0.93) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(Sox21b)_(Mus_musculus)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Sp1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Sp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sqz 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.sqz -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sr 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.sr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.srp 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.srp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ss 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ss -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.STAT92E 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.STAT92E -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sug 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.sug -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Su(H) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Su(H) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.SU(HW) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.SU(HW) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sv 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.sv -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.svp 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.svp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tai 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.tai -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tap 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.tap -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Tbp)_(Homo_sapiens)_(DBD_0.90) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(Tbp)_(Homo_sapiens)_(DBD_0.90) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tgo 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.tgo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tin 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.tin -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tj 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.tj -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tll 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.tll -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(toy)_(Homo_sapiens)_(DBD_0.84) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(toy)_(Homo_sapiens)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Trl 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Trl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ttk 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.ttk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tup 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.tup -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.twi 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.twi -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ubx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Ubx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.unc-4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.unc-4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Usf 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Usf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.usp 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.usp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.vfl 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.vfl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.vri 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.vri -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Vsx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Vsx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Vsx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Vsx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.wor 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.wor -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Xrp1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.Xrp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(yps)_(Homo_sapiens)_(DBD_0.82) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.(yps)_(Homo_sapiens)_(DBD_0.82) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.z 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.z -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.zen 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.zen -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.zen2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Drosophila_melanogaster.zen2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.AC226150.2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.AC226150.2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.AHR 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.AHR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.AIRE 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.AIRE -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ALX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ALX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ALX3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ALX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ALX4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ALX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.AR 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.AR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ARID2)_(Saccharomyces_cerevisiae)_(DBD_0.26) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ARID2)_(Saccharomyces_cerevisiae)_(DBD_0.26) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARID3A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ARID3A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ARID3B)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ARID3B)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ARID3C)_(Mus_musculus)_(DBD_0.87) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ARID3C)_(Mus_musculus)_(DBD_0.87) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ARID5A)_(Mus_musculus)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ARID5A)_(Mus_musculus)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARID5B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ARID5B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARNT 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ARNT -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARNT2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ARNT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARNTL 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ARNTL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ARX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ASCL2)_(Mus_musculus)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ASCL2)_(Mus_musculus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ATF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ATF2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ATF2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ATF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ATF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ATF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ATF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ATF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ATOH1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ATOH1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ATOH8)_(Drosophila_melanogaster)_(DBD_0.70) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ATOH8)_(Drosophila_melanogaster)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BACH1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BACH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BACH2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BACH2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(BARHL1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(BARHL1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BARHL2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BARHL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BARX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BARX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BARX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BARX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BATF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BATF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BATF3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BATF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(BBX)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(BBX)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BCL11A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BCL11A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BCL6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BCL6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BCL6B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BCL6B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHA15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BHLHA15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE22 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BHLHE22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE23 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BHLHE23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE40 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BHLHE40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE41 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BHLHE41 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BPTF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BPTF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BRCA1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BRCA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BSX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.BSX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.C11orf9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.C11orf9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CBFB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CBFB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CDC5L 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CDC5L -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CDX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CDX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CDX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CDX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CEBPA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CEBPB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPD 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CEBPD -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPE 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CEBPE -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPG 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CEBPG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPZ 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CEBPZ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CENPB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CENPB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CGBP 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CGBP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(CIC)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(CIC)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CLOCK 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CLOCK -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CPEB1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CPEB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREB1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CREB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREB3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CREB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREB3L1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CREB3L1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(CREB3L2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(CREB3L2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(CREB5)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(CREB5)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREM 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CREM -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CRX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CRX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CTCF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCFL 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CTCFL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CUX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CUX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CUX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CUX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CXXC1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.CXXC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DBP 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DBP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(DBX2)_(Mus_musculus)_(DBD_0.93) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(DBX2)_(Mus_musculus)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DDIT3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DDIT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DLX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DLX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DLX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DLX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DLX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DLX6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMBX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DMBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMRT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DMRT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMRT2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DMRT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMRT3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DMRT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMRTA2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DMRTA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(DMRTC2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(DMRTC2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DNMT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DNMT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DPRX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DPRX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DRGX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DRGX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DUX4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DUX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DUXA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.DUXA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.E2F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.E2F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.E2F3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.E2F4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.E2F5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.E2F6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.E2F7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.E2F8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E4F1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.E4F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EBF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EGR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EGR2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EGR3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EGR4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EHF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EHF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ELF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ELF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ELF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ELF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ELF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELK1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ELK1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELK3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ELK3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELK4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ELK4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EMX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EMX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EMX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EMX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EN1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EN1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EN2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EN2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ENO1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ENO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ENSG00000229544)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ENSG00000229544)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ENSG00000235187)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ENSG00000235187)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ENSG00000250542)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ENSG00000250542)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EOMES 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EOMES -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EPAS1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EPAS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ERF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ERF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ERG 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ERG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ESR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESR2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ESR2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESRRA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ESRRA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESRRB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ESRRB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESRRG 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ESRRG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ESX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETS1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ETS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETS2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ETS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ETV1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ETV2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ETV3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ETV4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ETV5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ETV6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ETV7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EVX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EVX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EVX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.EVX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FERD3L)_(Drosophila_melanogaster)_(DBD_0.89) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(FERD3L)_(Drosophila_melanogaster)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FEV 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FEV -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FEZF1)_(Drosophila_melanogaster)_(DBD_0.91) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(FEZF1)_(Drosophila_melanogaster)_(DBD_0.91) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FIGLA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FIGLA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FLI1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FLI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOS 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOS -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOSB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOSB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOSL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOSL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOSL2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOSL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXA1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXA2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXA3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXA3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXB1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXB2)_(Mus_musculus)_(DBD_0.94) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(FOXB2)_(Mus_musculus)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXC1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXC2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXD1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXD2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXD3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXD3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXD4L2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXD4L2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXG1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXH1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXI1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXJ1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(FOXJ1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXJ2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXJ2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXJ3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXJ3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXK1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXK1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXK2)_(Mus_musculus)_(DBD_0.90) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(FOXK2)_(Mus_musculus)_(DBD_0.90) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXL2)_(Mus_musculus)_(DBD_0.70) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(FOXL2)_(Mus_musculus)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXN3)_(Strongylocentrotus_purpuratus)_(DBD_0.44) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(FOXN3)_(Strongylocentrotus_purpuratus)_(DBD_0.44) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXO1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXO3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXO3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXO4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXO4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXO6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXO6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXP2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXP3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXQ1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FOXQ1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FUBP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.FUBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GABPA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GATA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GATA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GATA3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GATA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GATA5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GATA6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GBX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GBX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GBX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GCM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GCM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GCM2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GCM2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GFI1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GFI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GFI1B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GFI1B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLI1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GLI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLI2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GLI2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLI3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GLI3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLIS1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GLIS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLIS2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GLIS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLIS3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GLIS3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GMEB1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GMEB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GMEB2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GMEB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GRHL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GRHL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GSC 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GSC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GSC2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GSC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GSX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GSX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GSX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.GSX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HAND1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HAND1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HBP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HDX)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HDX)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HES1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HES1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HES2)_(Mus_musculus)_(DBD_0.83) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HES2)_(Mus_musculus)_(DBD_0.83) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HES5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HES5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HES7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HES7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HESX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HESX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HEY1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HEY1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HEY2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HEY2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HHEX)_(Caenorhabditis_elegans)_(DBD_0.77) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HHEX)_(Caenorhabditis_elegans)_(DBD_0.77) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIC1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HIC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIC2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HIC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIF1A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HIF1A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HINFP 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HINFP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIVEP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HIVEP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIVEP2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HIVEP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HLF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HLF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HLTF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HLTF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HLX)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HLX)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMBOX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HMBOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HMG20B)_(Mus_musculus)_(DBD_0.94) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HMG20B)_(Mus_musculus)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMGA1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HMGA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMGA2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HMGA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HMX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HMX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMX3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HMX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HNF1A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HNF1A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HNF1B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HNF1B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HNF4A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HNF4A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HNF4G 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HNF4G -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOMEZ 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOMEZ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXA11)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HOXA11)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXA13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXA3)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HOXA3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXA4)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HOXA4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXA5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXA6)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HOXA6)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXA7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXA9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXB13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXB4)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HOXB4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXB5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXB6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXB7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXB8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXC10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXC11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC12 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXC12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXC13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXC5)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HOXC5)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXC6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXC8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXC9)_(Mus_musculus)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HOXC9)_(Mus_musculus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXD10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXD11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD12 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXD12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXD13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXD1)_(Mus_musculus)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HOXD1)_(Mus_musculus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXD3)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(HOXD3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXD4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXD8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HOXD9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HSF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HSF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSF4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HSF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSFY2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.HSFY2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ID2)_(Mus_musculus)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ID2)_(Mus_musculus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ID4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ID4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.INSM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.INSM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.IRF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.IRF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.IRF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.IRF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.IRF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(IRF6)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(IRF6)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.IRF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.IRF8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.IRF9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(IRX1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(IRX1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.IRX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(IRX4)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(IRX4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRX5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.IRX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ISL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ISL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ISL2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ISL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ISX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ISX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JDP2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.JDP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUN 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.JUN -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUNB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.JUNB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUND 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.JUND -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KDM2B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.KDM2B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.KLF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(KLF12)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(KLF12)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.KLF13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF14 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.KLF14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.KLF15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF16 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.KLF16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(KLF2)_(Mus_musculus)_(DBD_0.95) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(KLF2)_(Mus_musculus)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.KLF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.KLF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.KLF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.KLF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(KLF7)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(KLF7)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.KLF8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(KLF9)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(KLF9)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LBX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.LBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LBX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.LBX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LCOR)_(Meleagris_gallopavo)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(LCOR)_(Meleagris_gallopavo)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LEF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.LEF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LHX1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(LHX1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LHX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.LHX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LHX3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.LHX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LHX4)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(LHX4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LHX5)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(LHX5)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LHX6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.LHX6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LHX8)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(LHX8)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LHX9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.LHX9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LIN54)_(Gallus_gallus)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(LIN54)_(Gallus_gallus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LMX1A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.LMX1A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LMX1B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.LMX1B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MAF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MAFA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MAFB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MAFF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFG 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MAFG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFK 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MAFK -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MAX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAZ 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MAZ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MBD2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MBD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MECOM 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MECOM -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MECP2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MECP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MEF2A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MEF2B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MEF2C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2D 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MEF2D -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEIS1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MEIS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEIS2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MEIS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEIS3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MEIS3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEOX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MEOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEOX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MEOX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MESP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MESP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MGA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MGA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MITF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MITF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MIXL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MIXL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MLL 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MLL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MLX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MLX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MLXIPL 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MLXIPL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(MLXIP)_(Mus_musculus)_(DBD_0.82) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(MLXIP)_(Mus_musculus)_(DBD_0.82) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MNT 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MNT -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MNX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MNX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MSC 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MSC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MSX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MSX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MSX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MSX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MTF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MTF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MXI1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MXI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MYB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYBL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MYBL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYBL2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MYBL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYC 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MYC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(MYCL1)_(Mus_musculus)_(DBD_0.66) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(MYCL1)_(Mus_musculus)_(DBD_0.66) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYCN 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MYCN -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(MYF5)_(Mus_musculus)_(DBD_0.90) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(MYF5)_(Mus_musculus)_(DBD_0.90) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYF6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MYF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYOD1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MYOD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYOG 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MYOG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(MYPOP)_(Mus_musculus)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(MYPOP)_(Mus_musculus)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MZF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.MZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NAIF1)_(Xenopus_tropicalis)_(DBD_0.71) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(NAIF1)_(Xenopus_tropicalis)_(DBD_0.71) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NANOG 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NANOG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NEUROD1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NEUROD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NEUROD2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NEUROD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NEUROG1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(NEUROG1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NEUROG2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NEUROG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFAT5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFAT5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFATC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFATC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFATC3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFATC4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFE2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2L1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFE2L1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2L2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFE2L2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFIA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFIA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFIB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFIB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFIL3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFIL3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFIX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFIX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFKB1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFKB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFKB2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFKB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFYA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFYB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYC 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NFYC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NHLH1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NHLH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NHLH2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(NHLH2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NKX1-1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(NKX1-1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX2-1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NKX2-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX2-2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NKX2-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NKX2-3)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(NKX2-3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX2-5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NKX2-5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX2-8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NKX2-8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX3-1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NKX3-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX3-2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NKX3-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NKX6-1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(NKX6-1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NOBOX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NOBOX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NOTO 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NOTO -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NPAS2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(NPAS2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NPAS4)_(Drosophila_melanogaster)_(DBD_0.61) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(NPAS4)_(Drosophila_melanogaster)_(DBD_0.61) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR0B1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR0B1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1D1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR1D1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1H2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR1H2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1H4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR1H4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1I2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR1I2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1I3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR1I3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR2C1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR2C2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2E1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR2E1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2E3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR2E3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2F1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR2F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2F2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR2F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2F6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR2F6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR3C1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR3C1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR3C2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR3C2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR4A1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR4A1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR4A2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR4A2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR4A3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR4A3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR5A1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR5A1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR5A2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR5A2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR6A1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NR6A1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NRF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NRF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NRL 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.NRL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OLIG1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.OLIG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OLIG2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.OLIG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OLIG3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.OLIG3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ONECUT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ONECUT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ONECUT2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ONECUT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ONECUT3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ONECUT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(OSR1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(OSR1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(OSR2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(OSR2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(OTP)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(OTP)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OTX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.OTX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OTX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.OTX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OVOL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.OVOL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PAX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PAX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PAX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PAX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PAX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PAX6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PAX7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PAX8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PAX9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PBX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PBX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PBX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PBX3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PBX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PDX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PDX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PGR 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PGR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PHOX2A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PHOX2A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PHOX2B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PHOX2B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PITX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PITX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PITX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PITX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PITX3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PITX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PKNOX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PKNOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PKNOX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PKNOX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PLAG1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PLAG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PLAGL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PLAGL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU1F1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU1F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU2F1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU2F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU2F2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU2F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU2F3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU2F3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU3F1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU3F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU3F2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU3F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU3F3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU3F3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU3F4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU3F4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU4F1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU4F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU4F2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU4F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU4F3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU4F3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU5F1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU5F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU5F1B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU5F1B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU6F1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU6F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU6F2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.POU6F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PPARA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PPARA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PPARD 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PPARD -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PPARG 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PPARG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRDM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PRDM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRDM4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PRDM4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRKRIR 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PRKRIR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PROP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PROP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PROX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PROX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRRX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PRRX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRRX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PRRX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PTF1A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PTF1A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PURA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.PURA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RARA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RARA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RARB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RARB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RARG 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RARG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RAX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RAX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RAX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RAX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RBPJ 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RBPJ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REL 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.REL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RELA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RELB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REST 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.REST -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RFX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RFX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RFX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RFX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RFX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(RFX6)_(Mus_musculus)_(DBD_0.66) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(RFX6)_(Mus_musculus)_(DBD_0.66) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(RFX7)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(RFX7)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RHOXF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RHOXF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RORA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RORA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(RORB)_(Tetraodon_nigroviridis)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(RORB)_(Tetraodon_nigroviridis)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RORC 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RORC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RREB1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RREB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RUNX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RUNX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RUNX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RUNX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RUNX3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RUNX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RXRA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RXRA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RXRB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RXRB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RXRG 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.RXRG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SCRT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SCRT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SCRT2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SCRT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SHOX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SHOX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SHOX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SHOX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIM1)_(Drosophila_melanogaster)_(DBD_0.89) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SIM1)_(Drosophila_melanogaster)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SIX1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SIX2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX3)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SIX3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX4)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SIX4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SIX5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SIX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX6)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SIX6)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SMAD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SMAD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SMAD3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SMAD4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMARCC1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SMARCC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMARCC2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SMARCC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SNAI1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SNAI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SNAI2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SNAI2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SNAI3)_(Mus_musculus)_(DBD_0.75) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SNAI3)_(Mus_musculus)_(DBD_0.75) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOHLH2)_(Mus_musculus)_(DBD_0.84) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SOHLH2)_(Mus_musculus)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SOX10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX11)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SOX11)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX12)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SOX12)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SOX13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX14 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SOX14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SOX15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX17 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SOX17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX18 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SOX18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SOX1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SOX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX21 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SOX21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX30)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SOX30)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX3)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SOX3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SOX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SOX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX6)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SOX6)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SOX7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SOX8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SOX9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SP5)_(Drosophila_melanogaster)_(DBD_0.93) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(SP5)_(Drosophila_melanogaster)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SP8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPDEF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SPDEF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPI1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SPI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPIB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SPIB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPIC 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SPIC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPZ1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SPZ1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SREBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SREBF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SRF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRY 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.SRY -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.STAT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.STAT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.STAT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.STAT4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT5A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.STAT5A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT5B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.STAT5B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.STAT6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.T 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.T -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TAL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TAL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBP 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TBP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TBR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TBX10)_(Mus_musculus)_(DBD_0.87) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(TBX10)_(Mus_musculus)_(DBD_0.87) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TBX15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX19 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TBX19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TBX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX20 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TBX20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX21 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TBX21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TBX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TBX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TBX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF12 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TCF12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TCF15)_(Drosophila_melanogaster)_(DBD_0.70) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(TCF15)_(Drosophila_melanogaster)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TCF21)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(TCF21)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TCF23)_(Mus_musculus)_(DBD_0.60) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(TCF23)_(Mus_musculus)_(DBD_0.60) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TCF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TCF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TCF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF7L1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TCF7L1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF7L2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TCF7L2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TCFL5)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(TCFL5)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TEAD1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TEAD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TEAD3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TEAD3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TEAD4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TEAD4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TEF 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TEF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TERF2)_(Mus_musculus)_(DBD_0.92) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(TERF2)_(Mus_musculus)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TET1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TET1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP2A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TFAP2A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP2B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TFAP2B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP2C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TFAP2C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP2D 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TFAP2D -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TFAP2E)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(TFAP2E)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TFAP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFCP2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TFCP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TFCP2L1)_(Mus_musculus)_(DBD_0.95) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(TFCP2L1)_(Mus_musculus)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFDP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TFDP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFE3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TFE3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFEB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TFEB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFEC 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TFEC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TGIF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TGIF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TGIF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TGIF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TGIF2LX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TGIF2LX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.THAP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.THAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.THRA 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.THRA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.THRB 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.THRB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TLX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TLX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TLX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TLX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TP53 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TP53 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TP63 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TP63 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TP73 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TP73 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TWIST1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.TWIST1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TWIST2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(TWIST2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.UBP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.UBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.UNCX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.UNCX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.USF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.USF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VAX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.VAX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VAX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.VAX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VDR 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.VDR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VENTX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.VENTX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VSX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.VSX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VSX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.VSX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(VTN)_(Mus_musculus)_(DBD_0.79) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(VTN)_(Mus_musculus)_(DBD_0.79) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.WT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.WT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.XBP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.XBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YBX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.YBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.YY1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.YY2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBED1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZBED1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZBTB12)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZBTB12)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZBTB1)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZBTB1)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB33 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZBTB33 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZBTB3)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZBTB3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZBTB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB49 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZBTB49 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZBTB6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB7A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZBTB7A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB7B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZBTB7B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB7C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZBTB7C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZEB1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZEB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZFHX2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZFHX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZFHX3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZFHX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZFP161)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZFP161)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZFX 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZFX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZFY)_(Mus_musculus)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZFY)_(Mus_musculus)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZHX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZHX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZIC1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZIC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZIC2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZIC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZIC3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZIC3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZIC4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZIC4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZIC5)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZIC5)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZKSCAN1)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZKSCAN1)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZKSCAN3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZKSCAN3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF143 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF143 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF148 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF148 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF187)_(Mus_musculus)_(DBD_0.88) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZNF187)_(Mus_musculus)_(DBD_0.88) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF202)_(Mus_musculus)_(DBD_0.87) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZNF202)_(Mus_musculus)_(DBD_0.87) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF219 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF219 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF232 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF232 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF238 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF238 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF263 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF263 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF274 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF274 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF281)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZNF281)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF282 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF282 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF32)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZNF32)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF333 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF333 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF350 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF350 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF35)_(Mus_musculus)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZNF35)_(Mus_musculus)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF384 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF384 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF410 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF410 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF423 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF423 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF524 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF524 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF589 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF589 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF652)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZNF652)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF683 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF683 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF691)_(Mus_musculus)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZNF691)_(Mus_musculus)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF713 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF713 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF740 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF740 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF75A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF75A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF76)_(Xenopus_laevis)_(DBD_0.84) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZNF76)_(Xenopus_laevis)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF784 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZNF784 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZSCAN10)_(Mus_musculus)_(DBD_0.82) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.(ZSCAN10)_(Mus_musculus)_(DBD_0.82) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZSCAN16 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZSCAN16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZSCAN4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Homo_sapiens.hg20.ZSCAN4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.9430076C15Rik 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.9430076C15Rik -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.AC189028.1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.AC189028.1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ahctf1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Ahctf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ahr)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Ahr)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Alx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Alx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Alx3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Alx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Alx4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Alx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ar 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Ar -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Arid2)_(Saccharomyces_cerevisiae)_(DBD_0.26) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Arid2)_(Saccharomyces_cerevisiae)_(DBD_0.26) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arid3a 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Arid3a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arid3b 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Arid3b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arid5a 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Arid5a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arid5b 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Arid5b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arnt 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Arnt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arnt2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Arnt2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arntl 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Arntl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Arx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ascl2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Ascl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Atf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Atf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Atf3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Atf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Atf5)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Atf5)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Atf6)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Atf6)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Atf7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atoh1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Atoh1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Atoh8)_(Drosophila_melanogaster)_(DBD_0.70) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Atoh8)_(Drosophila_melanogaster)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Bach1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Bach1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Bach2)_(Homo_sapiens)_(DBD_0.72) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Bach2)_(Homo_sapiens)_(DBD_0.72) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Barhl1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Barhl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Barhl2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Barhl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Barx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Barx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Barx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Barx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Batf3)_(Homo_sapiens)_(DBD_0.75) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Batf3)_(Homo_sapiens)_(DBD_0.75) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Batf)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Batf)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bbx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Bbx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Bcl11a)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Bcl11a)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bcl6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Bcl6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bcl6b 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Bcl6b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bhlha15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Bhlha15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bhlhe22 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Bhlhe22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Bhlhe23)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Bhlhe23)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bhlhe40 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Bhlhe40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bhlhe41 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Bhlhe41 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bsx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Bsx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cdc5l)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Cdc5l)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cdx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Cdx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cdx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Cdx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cdx4)_(Homo_sapiens)_(DBD_0.91) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Cdx4)_(Homo_sapiens)_(DBD_0.91) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpa 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Cebpa -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Cebpb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpd 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Cebpd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpe 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Cebpe -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpg 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Cebpg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cenpb)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Cenpb)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cic 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Cic -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Clock 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Clock -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cphx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Cphx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Creb1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Creb1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Creb3)_(Homo_sapiens)_(DBD_0.82) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Creb3)_(Homo_sapiens)_(DBD_0.82) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Creb3l2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Creb3l2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Crebzf 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Crebzf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Crem 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Crem -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Crx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Crx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ctcf 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Ctcf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ctcfl)_(Homo_sapiens)_(DBD_0.81) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Ctcfl)_(Homo_sapiens)_(DBD_0.81) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cux1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Cux1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cux2)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Cux2)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cxxc1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Cxxc1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dbp 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Dbp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dbx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Dbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dbx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Dbx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ddit3)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Ddit3)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Dlx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Dlx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Dlx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Dlx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Dlx5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dlx6)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Dlx6)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dmbx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Dmbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrt1)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Dmrt1)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrt2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Dmrt2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrt3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Dmrt3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrta1)_(Drosophila_melanogaster)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Dmrta1)_(Drosophila_melanogaster)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrta2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Dmrta2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dmrtc2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Dmrtc2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dnajc21 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Dnajc21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dobox4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Dobox4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dux 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Dux -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Duxbl 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Duxbl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f1)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(E2f1)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.E2f2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.E2f2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.E2f3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.E2f3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(E2f4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f5)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(E2f5)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f6)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(E2f6)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f7)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(E2f7)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f8)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(E2f8)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E4f1)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(E4f1)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ebf1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Ebf1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Egr1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Egr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Egr2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Egr2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Egr3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Egr3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Egr4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Egr4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ehf 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Ehf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Elf1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Elf1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elf2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Elf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elf3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Elf3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elf4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Elf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elf5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Elf5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elk1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Elk1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elk3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Elk3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elk4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Elk4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Emx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Emx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Emx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Emx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.En1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.En1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.En2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.En2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(ENSMUSG00000044690)_(Homo_sapiens)_(DBD_0.95) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(ENSMUSG00000044690)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.ENSMUSG00000079994 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.ENSMUSG00000079994 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(ENSMUSG00000090020)_(Strongylocentrotus_purpuratus)_(DBD_0.44) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(ENSMUSG00000090020)_(Strongylocentrotus_purpuratus)_(DBD_0.44) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Eomes 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Eomes -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Erf)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Erf)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Erg 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Erg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esr1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Esr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Esr2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Esr2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esrra 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Esrra -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esrrb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Esrrb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esrrg 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Esrrg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Esx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ets1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Ets1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ets2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Ets2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Etv1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Etv2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Etv2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Etv3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Etv4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Etv5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Etv6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Evx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Evx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Evx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Evx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ferd3l)_(Drosophila_melanogaster)_(DBD_0.89) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Ferd3l)_(Drosophila_melanogaster)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Fev)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Fev)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Fezf2)_(Drosophila_melanogaster)_(DBD_0.91) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Fezf2)_(Drosophila_melanogaster)_(DBD_0.91) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Figla 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Figla -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Fli1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Fli1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Fosb)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Fosb)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Fos)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Fos)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Fosl1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Fosl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Fosl2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Fosl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxa1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Foxa1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxa2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxa2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxa3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Foxa3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxb1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxb1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxc1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxc1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxc2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxc2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxd1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Foxd1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxd2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Foxd2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxd3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Foxd3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxf2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Foxf2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxg1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxg1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxh1)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Foxh1)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxi1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Foxi1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxj1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxj1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxj2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxj2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxj3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxj3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxk1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxk1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxl1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxm1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Foxm1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxn3)_(Homo_sapiens)_(DBD_0.45) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Foxn3)_(Homo_sapiens)_(DBD_0.45) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxo1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxo1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxo3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxo3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxo4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxo4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxo6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxo6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxp1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxp2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Foxp2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxp4)_(Homo_sapiens)_(DBD_0.87) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Foxp4)_(Homo_sapiens)_(DBD_0.87) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxq1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Foxq1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxs1)_(Homo_sapiens)_(DBD_0.78) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Foxs1)_(Homo_sapiens)_(DBD_0.78) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gabpa 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gabpa -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gata1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gata2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Gata2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gata3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gata4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gata5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gata6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gbx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gbx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gbx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gcm1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gcm1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gcm2)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Gcm2)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gfi1b 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gfi1b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gli1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Gli1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gli2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Gli2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gli3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gli3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Glis1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Glis1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Glis2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Glis2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Glis3)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Glis3)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm4830 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gm4830 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm4881 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gm4881 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm5294 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gm5294 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm5454 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gm5454 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm98 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gm98 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gmeb1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gmeb1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gmeb2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gmeb2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Grhl1)_(Homo_sapiens)_(DBD_0.84) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Grhl1)_(Homo_sapiens)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gsc 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gsc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gsc2)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Gsc2)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gsx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Gsx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gsx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Gsx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hand1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hand1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hbp1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hbp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hdx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hdx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hes1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hes1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hes2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hes2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hes5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hes5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hes7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hes7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hesx1)_(Acipenser_baerii)_(DBD_0.79) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hesx1)_(Acipenser_baerii)_(DBD_0.79) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hey1)_(Homo_sapiens)_(DBD_0.95) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hey1)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hey2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hey2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hhex)_(Caenorhabditis_elegans)_(DBD_0.77) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hhex)_(Caenorhabditis_elegans)_(DBD_0.77) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hic1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hic1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hic2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hic2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hif3a)_(Homo_sapiens)_(DBD_0.74) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hif3a)_(Homo_sapiens)_(DBD_0.74) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hivep1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hivep1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hivep2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hivep2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hlf 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hlf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hlx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hlx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmbox1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hmbox1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmg20b 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hmg20b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hmga1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hmga1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmga2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hmga2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hmx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hmx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hmx3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hmx3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hnf1a 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hnf1a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hnf1b 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hnf1b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hnf4a 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hnf4a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hnf4g)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hnf4g)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Homez 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Homez -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxa1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxa10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxa11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxa13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxa2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxa3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxa4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxa5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxa6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxa7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxa9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxb13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hoxb1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hoxb1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxb3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxb4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxb5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxb6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxb7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxb8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hoxb9)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hoxb9)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxc10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxc11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc12 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxc12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxc13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxc4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxc6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxc8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxc9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxd1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxd10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxd11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hoxd12)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hoxd12)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxd13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxd3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hoxd4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hoxd4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxd8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Hoxd9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hsf1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hsf1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hsf2)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hsf2)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hsf4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hsf4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hsfy2)_(Homo_sapiens)_(DBD_0.71) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Hsfy2)_(Homo_sapiens)_(DBD_0.71) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Id2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Id2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Id4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Id4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Insm1)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Insm1)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.IRC900814 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.IRC900814 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Irf1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Irf1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Irf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Irf3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Irf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Irf5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Irf6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Irf7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Irf9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Irx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Irx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Irx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Irx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Irx5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Irx6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Isl1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Isl1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Isl2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Isl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Isx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Isx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Jdp2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Jdp2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Jun 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Jun -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Junb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Junb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Jund 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Jund -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Kdm2b)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Kdm2b)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Klf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf12 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Klf12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf13)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Klf13)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf14)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Klf14)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf15)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Klf15)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf16)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Klf16)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Klf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Klf3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Klf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf5)_(Homo_sapiens)_(DBD_0.95) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Klf5)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf6)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Klf6)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Klf7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Klf8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Klf9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Lbx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Lbx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lbx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Lbx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Lcor)_(Meleagris_gallopavo)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Lcor)_(Meleagris_gallopavo)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lef1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Lef1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Lhx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Lhx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Lhx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Lhx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Lhx5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Lhx6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Lhx8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Lhx9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Lin54)_(Gallus_gallus)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Lin54)_(Gallus_gallus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lmx1a 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Lmx1a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mafa)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Mafa)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mafb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mafb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mafg 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mafg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Maf)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Maf)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mafk 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mafk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Max 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Max -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Maz)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Maz)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mbd1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mbd1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mbd2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Mbd2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mbtps2)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Mbtps2)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mecom 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mecom -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mecp2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mecp2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mef2a)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Mef2a)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mef2b)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Mef2b)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mef2c)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Mef2c)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mef2d)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Mef2d)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meis1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Meis1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meis2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Meis2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meis3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Meis3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meox1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Meox1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meox2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Meox2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mesp2)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Mesp2)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mga)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Mga)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mitf 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mitf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mixl1)_(Homo_sapiens)_(DBD_0.95) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Mixl1)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mlx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mlx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mlxip 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mlxip -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mlxipl)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Mlxipl)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mnt 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mnt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mnx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mnx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Msc 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Msc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Msx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Msx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Msx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Msx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Msx3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Msx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mtf1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mtf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Myb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mybl1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mybl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mybl2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mybl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myc 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Myc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mycn 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mycn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myf6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Myf6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myod1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Myod1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myog 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Myog -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mypop 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mypop -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Myt1l)_(Caenorhabditis_elegans)_(DBD_0.76) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Myt1l)_(Caenorhabditis_elegans)_(DBD_0.76) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mzf1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Mzf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Naif1)_(Xenopus_tropicalis)_(DBD_0.71) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Naif1)_(Xenopus_tropicalis)_(DBD_0.71) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nanog 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nanog -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Neurod1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Neurod1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Neurod2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Neurod2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Neurog1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Neurog1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Neurog2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Neurog2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Neurog3)_(Homo_sapiens)_(DBD_0.91) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Neurog3)_(Homo_sapiens)_(DBD_0.91) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfat5)_(Gallus_gallus)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nfat5)_(Gallus_gallus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfatc1)_(Monodelphis_domestica)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nfatc1)_(Monodelphis_domestica)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfatc2)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nfatc2)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfatc3)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nfatc3)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfatc4)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nfatc4)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfe2)_(Homo_sapiens)_(DBD_0.95) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nfe2)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfe2l1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nfe2l1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nfe2l2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nfe2l2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfia)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nfia)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfib)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nfib)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nfil3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nfil3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfix)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nfix)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfkb1)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nfkb1)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfkb2)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nfkb2)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfya)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nfya)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nhlh1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nhlh1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nhlh2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nhlh2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx1-1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nkx1-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx1-2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nkx1-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nkx2-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nkx2-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nkx2-3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nkx2-4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nkx2-5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nkx2-6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nkx2-9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx3-1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nkx3-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx3-2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nkx3-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx6-1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nkx6-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nkx6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nkx6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nobox 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nobox -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Noto 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Noto -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(NP_001076596.1)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(NP_001076596.1)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Npas2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Npas2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Npas4)_(Drosophila_melanogaster)_(DBD_0.61) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Npas4)_(Drosophila_melanogaster)_(DBD_0.61) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1d1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nr1d1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1h2)_(Homo_sapiens)_(DBD_0.94) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nr1h2)_(Homo_sapiens)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1h4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nr1h4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1i2)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nr1i2)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1i3)_(Homo_sapiens)_(DBD_0.89) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nr1i3)_(Homo_sapiens)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2c1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nr2c1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr2c2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nr2c2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2e1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nr2e1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2e3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nr2e3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2f1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nr2f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2f2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nr2f2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2f6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nr2f6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr3c1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nr3c1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr3c2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nr3c2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr4a1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nr4a1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr4a2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nr4a2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr4a3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nr4a3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr5a1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nr5a1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr5a2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Nr5a2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr6a1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nr6a1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nrl)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Nrl)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Obox1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Obox1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Obox3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Obox3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Obox5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Obox5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Obox6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Obox6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Olig1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Olig1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Olig2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Olig2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Olig3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Olig3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Onecut1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Onecut1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Onecut2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Onecut2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Onecut3)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Onecut3)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Osr1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Osr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Osr2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Osr2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Otp 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Otp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Otx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Otx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Otx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Otx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ovol1)_(Homo_sapiens)_(DBD_0.94) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Ovol1)_(Homo_sapiens)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ovol2)_(Caenorhabditis_elegans)_(DBD_0.70) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Ovol2)_(Caenorhabditis_elegans)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Pax1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pax2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pax2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Pax3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pax4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pax4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax5)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Pax5)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pax6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pax6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pax7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pax7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax8)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Pax8)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax9)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Pax9)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pbx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pbx2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Pbx2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pbx3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Pbx3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pdx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pdx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pgr)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Pgr)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Phf21a 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Phf21a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Phox2a 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Phox2a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Phox2b 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Phox2b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pit1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pit1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pitx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pitx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pitx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pitx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pitx3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pitx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pknox1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pknox1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pknox2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pknox2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Plag1)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Plag1)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Plagl1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Plagl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou1f1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pou1f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou2f1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pou2f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou2f2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pou2f2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou2f3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pou2f3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou3f1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pou3f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou3f2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pou3f2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou3f3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pou3f3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou3f4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pou3f4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pou4f1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Pou4f1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pou4f2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Pou4f2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou4f3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pou4f3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou5f1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pou5f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou6f1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Pou6f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pou6f2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Pou6f2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ppara)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Ppara)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ppard)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Ppard)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pparg)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Pparg)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Prdm11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Prdm11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Prdm1)_(Drosophila_melanogaster)_(DBD_0.73) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Prdm1)_(Drosophila_melanogaster)_(DBD_0.73) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Prdm4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Prdm4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Prkrir)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Prkrir)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Prop1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Prop1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Prrx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Prrx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Prrx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Prrx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Prrxl1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Prrxl1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ptf1a)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Ptf1a)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rara 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rara -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rarb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rarb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rarg 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rarg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rax 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rax -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rbpj)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Rbpj)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rela 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rela -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Relb)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Relb)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rel)_(Homo_sapiens)_(DBD_0.93) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Rel)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rest)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Rest)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rfx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rfx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rfx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rfx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rfx5)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Rfx5)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rfx7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rfx8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rhox11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rhox11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rhox6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rhox6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rhox8)_(Rattus_norvegicus)_(DBD_0.95) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Rhox8)_(Rattus_norvegicus)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rora 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rora -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rorb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rorb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rorc)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Rorc)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rreb1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Rreb1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Runx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Runx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Runx2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Runx2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Runx3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Runx3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rxra 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rxra -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rxrb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rxrb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rxrg 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Rxrg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Scrt1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Scrt1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Scrt2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Scrt2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sebox 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sebox -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Setbp1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Setbp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sfpi1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sfpi1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Shox2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Shox2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sim1)_(Drosophila_melanogaster)_(DBD_0.89) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Sim1)_(Drosophila_melanogaster)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Six1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Six2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Six3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Six4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Six5)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Six5)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Six6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smad1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Smad1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smad2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Smad2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Smad3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Smad3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smad4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Smad4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smarcc1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Smarcc1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smarcc2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Smarcc2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Snai1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Snai1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Snai2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Snai2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sohlh2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sohlh2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox11 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox12 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox13 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox14 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox17 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox18 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox21 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox30 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox30 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sox8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sox9)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Sox9)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sp1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sp100 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sp100 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sp110 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sp110 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sp2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Sp2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sp3)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Sp3)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sp4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sp4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sp5)_(Drosophila_melanogaster)_(DBD_0.93) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Sp5)_(Drosophila_melanogaster)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sp8)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Sp8)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Spdef 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Spdef -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Spib)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Spib)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Spic 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Spic -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Spz1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Spz1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Srebf1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Srebf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Srebf2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Srebf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Srf 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Srf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sry 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Sry -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Stat1)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Stat1)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Stat2)_(Homo_sapiens)_(DBD_0.81) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Stat2)_(Homo_sapiens)_(DBD_0.81) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Stat3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Stat3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Stat4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Stat4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Stat5a)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Stat5a)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Stat5b)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Stat5b)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Stat6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Stat6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.T 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.T -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tal1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Tal1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tbpl2)_(Homo_sapiens)_(DBD_0.85) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Tbpl2)_(Homo_sapiens)_(DBD_0.85) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbr1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tbr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tbx15)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Tbx15)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tbx19)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Tbx19)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tbx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx20 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tbx20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tbx21)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Tbx21)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tbx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tbx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tbx5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf12 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcf12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tcf15)_(Drosophila_melanogaster)_(DBD_0.70) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Tcf15)_(Drosophila_melanogaster)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf21 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcf21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcf3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcf7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf7l1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcf7l1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf7l2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcf7l2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap2a 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcfap2a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap2b 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcfap2b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap2c 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcfap2c -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tcfap2d)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Tcfap2d)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap2e 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcfap2e -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcfap4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tcfcp2)_(Gallus_gallus)_(DBD_0.95) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Tcfcp2)_(Gallus_gallus)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfcp2l1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcfcp2l1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfe3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcfe3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfeb 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcfeb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfec 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcfec -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfl5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tcfl5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tead3)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Tead3)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tead4)_(Homo_sapiens)_(DBD_0.94) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Tead4)_(Homo_sapiens)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tef 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tef -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Terf2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Terf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tfdp1)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Tfdp1)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tgif1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tgif1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tgif2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tgif2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Thra)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Thra)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Thrb)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Thrb)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tlx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Tlx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tlx2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Tlx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Trp53 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Trp53 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Trp63)_(Homo_sapiens)_(DBD_0.86) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Trp63)_(Homo_sapiens)_(DBD_0.86) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Trp73 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Trp73 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Twist1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Twist1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Twist2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Twist2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ubp1)_(Homo_sapiens)_(DBD_0.93) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Ubp1)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Uncx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Uncx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Usf1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Usf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Usf2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Usf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Vax1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Vax1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Vax2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Vax2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Vdr 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Vdr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Vsx1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Vsx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Vsx2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Vsx2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Wt1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Wt1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Xbp1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Xbp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ybx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Ybx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Yy1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Yy1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zbtb1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zbtb1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zbtb12 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zbtb12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zbtb3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zbtb3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb49)_(Homo_sapiens)_(DBD_0.95) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zbtb49)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb4)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zbtb4)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb6)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zbtb6)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb7a)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zbtb7a)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zbtb7b 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zbtb7b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb7c)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zbtb7c)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zeb1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zeb1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp105 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp105 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp110)_(Homo_sapiens)_(DBD_0.85) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zfp110)_(Homo_sapiens)_(DBD_0.85) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp128 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp128 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp143)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zfp143)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp148)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zfp148)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp161 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp161 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp187 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp187 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp202 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp202 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp219)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zfp219)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp238)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zfp238)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp263 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp263 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp281 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp281 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp282)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zfp282)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp300 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp300 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp384)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zfp384)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp410 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp410 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp523)_(Xenopus_laevis)_(DBD_0.84) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zfp523)_(Xenopus_laevis)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp524)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zfp524)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp637 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp637 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp652 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp652 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp691 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp691 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp711 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp711 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp740 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfp740 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp784)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zfp784)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp957)_(Arabidopsis_thaliana)_(DBD_0.40) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zfp957)_(Arabidopsis_thaliana)_(DBD_0.40) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfx 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zfx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zic1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zic1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zic2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zic2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zic3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zic3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zic4)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zic4)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zic5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zic5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zkscan1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zkscan1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zkscan4)_(Homo_sapiens)_(DBD_0.85) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.(Zkscan4)_(Homo_sapiens)_(DBD_0.85) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zkscan5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zkscan5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zscan10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zscan10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zscan20 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zscan20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zscan4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zscan4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zscan4c 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Mus_musculus.mm10.Zscan4c -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ABF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ABF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ABF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ABF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ACA1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ACA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ACE2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ACE2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ADR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ADR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.AFT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.AFT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARG5,6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ARG5,6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARG80 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ARG80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARG81 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ARG81 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARO80 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ARO80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ARR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.AZF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.AZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CAD1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.CAD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CAT8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.CAT8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CBF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.CBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CEP3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.CEP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CHA4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.CHA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CIN5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.CIN5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CRZ1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.CRZ1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CST6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.CST6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CUP2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.CUP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CUP9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.CUP9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DAL80 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.DAL80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DAL81 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.DAL81 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DAL82 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.DAL82 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DAT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.DAT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DOT6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.DOT6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ECM22 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ECM22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ECM23 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ECM23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.EDS1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.EDS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ERT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ERT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FHL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.FHL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FKH1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.FKH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FKH2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.FKH2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FYV5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.FYV5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FZF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.FZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GAL4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.GAL4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GAT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.GAT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GAT3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.GAT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GAT4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.GAT4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GCN4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.GCN4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GCR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.GCR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GCR2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.GCR2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GIS1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.GIS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GSM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.GSM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAC1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.HAC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAL9 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.HAL9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.HAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAP3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.HAP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAP4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.HAP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAP5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.HAP5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HCM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.HCM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HMRA1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.HMRA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HMRA2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.HMRA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HMS1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.HMS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HMS2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.HMS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HSF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.HSF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.IME1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.IME1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.IME4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.IME4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.INO2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.INO2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.INO4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.INO4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.IXR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.IXR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.KAR4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.KAR4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.LEU3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.LEU3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.LYS14 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.LYS14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MAC1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.MAC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MATALPHA1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.MATALPHA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MBP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.MBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MCM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.MCM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MET31 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.MET31 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MET32 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.MET32 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MET4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.MET4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MGA1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.MGA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MIG1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.MIG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MIG2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.MIG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MIG3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.MIG3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MSN1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.MSN1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MSN2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.MSN2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NDT80 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.NDT80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NHP10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.NHP10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NHP6A 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.NHP6A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NHP6B 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.NHP6B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NRG1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.NRG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NRG2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.NRG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.OAF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.OAF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.OPI1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.OPI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ORC1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ORC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.(ORC2)_(Mus_musculus)_(DBD_0.69) 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.(ORC2)_(Mus_musculus)_(DBD_0.69) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PDC2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.PDC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PDR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.PDR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PDR3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.PDR3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PDR8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.PDR8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PHD1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.PHD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PHO4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.PHO4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PPR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.PPR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PUT3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.PUT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PZF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.PZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RAP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RCO1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RCO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RDR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RDR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RDS1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RDS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RDS2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RDS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.REB1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.REB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.REI1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.REI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RFX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RFX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RGT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RGT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RIM101 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RIM101 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RLM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RLM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RME1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RME1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ROX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ROX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RPH1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RPH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RPN4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RPN4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RSC3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RSC3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RSC30 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RSC30 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RSF2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RSF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RTG1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RTG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RTG3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.RTG3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SFL1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SFL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SFP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SFP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SIP4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SIP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SKN7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SKN7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SKO1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SKO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SMK1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SMK1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SMP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SMP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SNF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SNF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SNT2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SNT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SOK2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SOK2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SPT10 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SPT10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SPT15 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SPT15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SPT2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SPT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SPT23 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SPT23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SRD1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SRD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STB2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.STB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STB3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.STB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STB4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.STB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STB5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.STB5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STE12 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.STE12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.STP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STP2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.STP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STP3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.STP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STP4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.STP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SUA7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SUA7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SUM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SUM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SUT1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SUT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SUT2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SUT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SWI4 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SWI4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SWI5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.SWI5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TBF1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.TBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TBS1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.TBS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TEA1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.TEA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TEC1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.TEC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.THI2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.THI2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.THO2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.THO2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TOD6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.TOD6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TOS8 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.TOS8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TYE7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.TYE7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.UGA3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.UGA3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.UME1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.UME1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.UME6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.UME6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.UPC2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.UPC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.URC2 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.URC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.VHR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.VHR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.WAR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.WAR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.WTM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.WTM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.XBP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.XBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP3 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YAP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP5 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YAP5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP6 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YAP6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP7 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YAP7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YDR266C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YDR266C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YDR520C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YDR520C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YER130C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YER130C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YER184C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YER184C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YGR067C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YGR067C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YHP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YHP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YKL222C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YKL222C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YLL054C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YLL054C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YLR278C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YLR278C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YML081W 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YML081W -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YNR063W 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YNR063W -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YOX1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YPR013C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YPR013C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YPR015C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YPR015C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YPR022C 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YPR022C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YPR196W 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YPR196W -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YRM1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YRM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YRR1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.YRR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ZAP1 2 3 4 GC,A SMAC-seq-resolution-motifs-m6A-GC.CIS-BP-Saccharomyces_cerevisiae.ZAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.3XHMGBOX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.3XHMGBOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ABF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ABF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ABI5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ABI5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ABR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ABR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.Adof1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.Adof1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL13 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AGL13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL15 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AGL15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL16 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AGL16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL25 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AGL25 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL42 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AGL42 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL6 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AGL6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL63 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AGL63 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AGL95 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AGL95 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AIL7 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AIL7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC004 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC004 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC005 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC005 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC011 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC011 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC013 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC013 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC016 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC016 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC017 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC017 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC020 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC020 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC028 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC028 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC034 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC034 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC038 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC038 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC042 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC042 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC045 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC045 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC046 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC046 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC047 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC047 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC050 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC050 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC053 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC053 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC055 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC055 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC057 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC057 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC058 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC058 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC062 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC062 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC070 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC070 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC071 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC071 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC075 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC075 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC079 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC079 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC083 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC083 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC087 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC087 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC092 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC092 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC094 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC094 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC096 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC096 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANAC103 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANAC103 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ANL2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ANL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AREB3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AREB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ARF16 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ARF16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ARF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ARF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AS2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ASHR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ASHR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ASL18 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ASL18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G01250 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G01250 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G04880 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G04880 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G10720 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G10720 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G12630 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G12630 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g13300 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g13300 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g14580 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g14580 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G18960 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G18960 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g19000 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g19000 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G19040 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G19040 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g19210 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g19210 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G20910 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G20910 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g22810 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g22810 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G23810 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G23810 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G24250 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G24250 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g25550 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g25550 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G28160 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G28160 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g36060 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g36060 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G44830 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G44830 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G47655 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G47655 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g49010 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g49010 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G49560 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G49560 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g64620 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g64620 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G66420 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G66420 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g68670 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g68670 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G69570 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G69570 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g69690 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g69690 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g70910 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g70910 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G71450 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G71450 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g72010 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g72010 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G72740 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G72740 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g74370 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g74370 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g74840 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g74840 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g75490 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g75490 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g76110 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g76110 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G76870 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G76870 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G76880 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G76880 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT1G77200 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT1G77200 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g77640 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g77640 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At1g78700 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At1g78700 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g01060 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At2g01060 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G01818 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT2G01818 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g03500 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At2g03500 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G15740 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT2G15740 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G17410 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT2G17410 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G20110 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT2G20110 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G20400 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT2G20400 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G28810 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT2G28810 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G28920 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT2G28920 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G31460 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT2G31460 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G33550 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT2G33550 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g33710 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At2g33710 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g38090 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At2g38090 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G38300 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT2G38300 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT2G40260 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT2G40260 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g41835 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At2g41835 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g44940 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At2g44940 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At2g45680 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At2g45680 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g04030 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At3g04030 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g09600 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At3g09600 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G09735 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G09735 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G10030 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G10030 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G10113 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G10113 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G10580 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G10580 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g11280 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At3g11280 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G12130 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G12130 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g12730 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At3g12730 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G12910 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G12910 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g13040 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At3g13040 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g14180 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At3g14180 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G16280 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G16280 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g24120 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At3g24120 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G25990 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G25990 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G42860 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G42860 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g45610 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At3g45610 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G46070 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G46070 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G49930 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G49930 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G51470 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G51470 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G52440 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G52440 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G57600 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G57600 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G58630 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G58630 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT3G60490 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT3G60490 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At3g60580 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At3g60580 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G00250 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT4G00250 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g01280 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At4g01280 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G12670 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT4G12670 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g16750 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At4g16750 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G18450 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT4G18450 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g18890 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At4g18890 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G26030 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT4G26030 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G27900 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT4G27900 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g28140 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At4g28140 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g31060 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At4g31060 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g32800 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At4g32800 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g36780 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At4g36780 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT4G37180 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT4G37180 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At4g38000 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At4g38000 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G02460 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT5G02460 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g04390 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g04390 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G05550 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT5G05550 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g05790 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g05790 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g08330 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g08330 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g08520 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g08520 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g08750 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g08750 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G18090 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT5G18090 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g18450 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g18450 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g22890 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g22890 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G22990 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT5G22990 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G23930 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT5G23930 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g29000 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g29000 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G45580 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT5G45580 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g47390 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g47390 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G47660 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT5G47660 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g52660 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g52660 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G56840 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT5G56840 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g58900 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g58900 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G59990 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT5G59990 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G60130 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT5G60130 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G61620 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT5G61620 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g62940 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g62940 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G63260 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT5G63260 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g65130 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g65130 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g66730 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g66730 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AT5G66940 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AT5G66940 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.At5g67000 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.At5g67000 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATAF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATAF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AtGRF6 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AtGRF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB13 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB15 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB18 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB20 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB21 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB23 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB24 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB24 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB25 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB25 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AtHB32 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AtHB32 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB33 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB33 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB34 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB34 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB40 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB53 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB53 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB6 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATHB7 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATHB7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AtIDD11 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AtIDD11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AtNLP4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AtNLP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATY13 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATY13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ATY19 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ATY19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.AZF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.AZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BAM8 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.BAM8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BBX31 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.BBX31 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH10 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bHLH10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH104 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bHLH104 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH122 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bHLH122 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH130 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bHLH130 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH157 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bHLH157 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH18 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bHLH18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH28 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bHLH28 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH31 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bHLH31 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH34 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bHLH34 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH69 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bHLH69 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH74 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bHLH74 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH77 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bHLH77 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bHLH80 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bHLH80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BIM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.BIM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BIM2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.BIM2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BIM3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.BIM3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BOS1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.BOS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BPC1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.BPC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BPC5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.BPC5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BPC6 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.BPC6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP16 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bZIP16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP18 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bZIP18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP28 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bZIP28 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bZIP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP42 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bZIP42 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP43 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bZIP43 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP44 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bZIP44 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP48 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bZIP48 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP50 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bZIP50 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP52 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bZIP52 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP53 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bZIP53 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP68 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bZIP68 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.bZIP69 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.bZIP69 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.BZR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.BZR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CAMTA1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CAMTA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CAMTA5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CAMTA5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CBF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CBF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CBF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CBF3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CBF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CBF4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CBF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CDF3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CDF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CDM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CDM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CEJ1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CEJ1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.COG1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.COG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CRC 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CRC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CRF10 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CRF10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CRF4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CRF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CUC1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CUC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CUC2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CUC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.CUC3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.CUC3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DAG2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.DAG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DDF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.DDF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DDF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.DDF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEAR2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.DEAR2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEAR3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.DEAR3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEAR5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.DEAR5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.DEL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DEL2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.DEL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.dof24 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.dof24 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.dof42 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.dof42 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.dof43 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.dof43 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.dof45 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.dof45 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DREB19 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.DREB19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DREB2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.DREB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.DREB26 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.DREB26 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.E2FA 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.E2FA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.E2FC 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.E2FC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EDT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.EDT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EIL3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.EIL3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EIN3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.EIN3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EMB1789 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.EMB1789 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.EPR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.EPR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF10 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF104 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF104 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF105 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF105 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF11 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF115 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF115 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF13 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF15 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF38 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF38 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF48 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF48 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF6 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF7 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF73 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF73 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF8 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ERF9 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ERF9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ESE1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ESE1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ESE3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ESE3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.FAR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.FAR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.FHA2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.FHA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.FRS9 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.FRS9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.FUS3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.FUS3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GATA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA11 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GATA11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA12 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GATA12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA14 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GATA14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA15 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GATA15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA16 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GATA16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA19 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GATA19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA20 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GATA20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GATA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GATA6 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GATA6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GBF3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GBF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GBF5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GBF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GBF6 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GBF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GRF9 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GRF9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GT2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GT3a 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GT3a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.GTL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.GTL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAP3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HAP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HAT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAT2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HAT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAT22 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HAT22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HAT5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HAT5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HDG1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HDG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HDG7 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HDG7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSF21 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HSF21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSF3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HSF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSF6 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HSF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSF7 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HSF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFA1E 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HSFA1E -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFA6A 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HSFA6A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFA6B 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HSFA6B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFB3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HSFB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFB4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HSFB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HSFC1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HSFC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.HY5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.HY5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.IDD2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.IDD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.IDD4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.IDD4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.IDD5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.IDD5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.IDD7 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.IDD7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.JGL 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.JGL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.JKD 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.JKD -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.KAN2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.KAN2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD13 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.LBD13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD18 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.LBD18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD19 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.LBD19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.LBD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LBD23 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.LBD23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LCL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.LCL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LEP 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.LEP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LHY1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.LHY1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LMI1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.LMI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.LOB 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.LOB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MGP 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MGP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MP 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MS188 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MS188 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB10 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB101 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB101 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB105 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB105 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB107 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB107 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB113 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB113 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB116 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB116 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB118 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB118 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB119 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB119 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB121 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB121 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB13 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB17 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB23 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB27 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB27 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB30 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB30 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB33 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB33 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB39 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB39 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB3R1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB3R1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB3R4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB3R4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB3R5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB3R5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB40 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB41 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB41 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB43 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB43 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB44 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB44 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB49 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB49 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB51 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB51 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB52 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB52 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB55 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB55 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB56 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB56 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB57 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB57 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB58 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB58 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB60 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB60 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB61 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB61 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB62 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB62 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB63 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB63 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB65 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB65 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB67 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB67 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB70 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB70 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB73 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB73 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB74 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB74 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB77 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB77 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB81 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB81 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB83 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB83 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB88 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB88 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB92 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB92 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB93 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB93 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB94 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB94 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB96 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB96 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB98 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB98 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.MYB99 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.MYB99 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NAC2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.NAC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NAM 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.NAM -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NAP 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.NAP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NFYB4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.NFYB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NGA4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.NGA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NLP7 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.NLP7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NST1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.NST1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NTL8 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.NTL8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NTM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.NTM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NTM2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.NTM2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.NUC 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.NUC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.OBP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.OBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.OBP3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.OBP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.OBP4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.OBP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PDF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.PDF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PHV 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.PHV -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PIF7 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.PIF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PLT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.PLT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PLT3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.PLT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PTF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.PTF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.PUCHI 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.PUCHI -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAP21 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.RAP21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.Rap210 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.Rap210 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAP211 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.RAP211 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAP212 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.RAP212 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAP26 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.RAP26 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RAV1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.RAV1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.REM16 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.REM16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.REM19 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.REM19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RKD2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.RKD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RRTF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.RRTF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.RVE1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.RVE1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SGR5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SGR5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SHN3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SHN3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SMB 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SMB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SND2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SND2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SND3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SND3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SOL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SOL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SPL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL11 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SPL11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL13 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SPL13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL14 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SPL14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL15 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SPL15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SPL3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SPL5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SPL9 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SPL9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SRS7 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SRS7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.STOP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.STOP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.STZ 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.STZ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.SVP 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.SVP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TBP3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TBP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TCP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP14 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TCP14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP16 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TCP16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP17 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TCP17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP20 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TCP20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP24 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TCP24 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TCP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCP7 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TCP7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TCX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TCX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TF3A 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TF3A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TGA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA10 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TGA10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TGA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TGA3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TGA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TGA5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA6 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TGA6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TGA9 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TGA9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TINY 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TINY -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TRP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TRP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TRP2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TRP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.TSO1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.TSO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.U2AF35B 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.U2AF35B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VIP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.VIP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.VND1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.VND2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.VND3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND4 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.VND4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VND6 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.VND6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.VRN1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.VRN1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WIP5 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WIP5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WLIM2A 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WLIM2A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WOX11 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WOX11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY11 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY14 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY15 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY17 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY18 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY20 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY21 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY22 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY24 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY24 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY25 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY25 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY26 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY26 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY27 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY27 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY28 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY28 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY29 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY29 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY3 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY30 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY30 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY31 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY31 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY33 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY33 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY40 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY42 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY42 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY43 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY43 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY45 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY45 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY46 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY46 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY47 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY47 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY50 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY50 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY55 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY55 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY59 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY59 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY6 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY65 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY65 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY7 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY70 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY70 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY71 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY71 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY75 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY75 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WRKY8 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WRKY8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.WUS1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.WUS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ZIM 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ZIM -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ZML1 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ZML1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/TAIR10/sequence/TAIR10.fa FIMO-ArabidopsisDAPv1.fimo.txt.annotated.ZML2 2 3 4 GC SMAC-seq-resolution-motifs-GC.ArabidopsisDAPv1.ZML2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(A3-3)_(Mus_musculus)_(DBD_0.56) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(A3-3)_(Mus_musculus)_(DBD_0.56) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ab 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ab -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.abd-A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.abd-A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Abd-B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Abd-B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ac 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ac -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Adf1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Adf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Aef1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Aef1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.amos 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.amos -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Antp 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Antp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.aop 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.aop -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ap 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ap -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ara 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ara -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ase 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ase -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Atf-2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Atf-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Atf6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Atf6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ato 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ato -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Awh 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Awh -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bab1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.bab1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bap 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.bap -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.BEAF-32 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.BEAF-32 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Bgb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Bgb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.B-H1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.B-H1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.B-H2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.B-H2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bigmax 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.bigmax -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bin 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.bin -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(bi)_(Nasonia_vitripennis)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(bi)_(Nasonia_vitripennis)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Blimp-1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Blimp-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bowl 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.bowl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.br 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.br -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.brk 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.brk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.bsh 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.bsh -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(bs)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(bs)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.btd 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.btd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Bteb2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Bteb2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.btn 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.btn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.byn 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.byn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.C15 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.C15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.cad 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.cad -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.cato 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.cato -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Cf2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Cf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG10267 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG10267 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG10904 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG10904 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG11071 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG11071 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG11085 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG11085 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG11152)_(Homo_sapiens)_(DBD_0.50) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(CG11152)_(Homo_sapiens)_(DBD_0.50) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG11504 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG11504 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG11617 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG11617 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG12155 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG12155 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG12605 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG12605 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG12768 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG12768 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG13424 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG13424 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG13897 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG13897 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG14962 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG14962 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG15601 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG15601 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG15696 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG15696 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG17181 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG17181 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG18599 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG18599 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG3065 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG3065 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG31670 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG31670 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG31782 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG31782 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG32105 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG32105 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG32532 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG32532 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG32830 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG32830 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG33557 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG33557 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG3407 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG3407 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG34340)_(Homo_sapiens)_(DBD_0.93) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(CG34340)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG34367)_(Mus_musculus)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(CG34367)_(Mus_musculus)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG3838 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG3838 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG3919 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG3919 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG42234 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG42234 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG4328 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG4328 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG4360 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG4360 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG4404 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG4404 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG4854 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG4854 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG5180 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG5180 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG5669 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG5669 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG5953 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG5953 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG6272 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG6272 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG6276 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG6276 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG6905)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(CG6905)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7056 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG7056 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7368 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG7368 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7386 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG7386 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7745 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG7745 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG7786)_(Homo_sapiens)_(DBD_0.56) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(CG7786)_(Homo_sapiens)_(DBD_0.56) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG7928 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG7928 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG8281 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG8281 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG8319 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG8319 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG8765 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG8765 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG9571)_(Mus_musculus)_(DBD_0.64) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(CG9571)_(Mus_musculus)_(DBD_0.64) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CG9727)_(Mus_musculus)_(DBD_0.51) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(CG9727)_(Mus_musculus)_(DBD_0.51) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CG9876 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CG9876 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ci 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ci -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Clk 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Clk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.crc 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.crc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CrebA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CrebA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(CrebB-17A)_(Mus_musculus)_(DBD_0.79) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(CrebB-17A)_(Mus_musculus)_(DBD_0.79) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(croc)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(croc)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.crol 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.crol -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.crp 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.crp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.CTCF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.CTCF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.cwo 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.cwo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.cyc 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.cyc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.D 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.D -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.D19A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.D19A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.D19B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.D19B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.da 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.da -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(dan)_(Bombyx_mori)_(DBD_0.85) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(dan)_(Bombyx_mori)_(DBD_0.85) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.danr 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.danr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dfd 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Dfd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dimm 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.dimm -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dip3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Dip3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.disco 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.disco -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.disco-r 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.disco-r -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dl 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.dl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dll 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Dll -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dmrt99B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.dmrt99B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Doc2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Doc2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dpn 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.dpn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dr 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Dr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Dref 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Dref -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dsf 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.dsf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dsx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.dsx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dve 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.dve -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.dys 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.dys -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.E2f 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.E2f -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.E5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.E5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.EcR 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.EcR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.eg 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.eg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Eip74EF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Eip74EF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Eip75B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Eip75B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Eip93F 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Eip93F -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ems 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ems -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ERR 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ERR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.esg 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.esg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.E(spl) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.E(spl) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets21C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Ets21C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets65A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Ets65A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets96B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Ets96B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets97D 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Ets97D -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ets98B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Ets98B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.eve 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.eve -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.exd 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.exd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.exex 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.exex -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(ey)_(Mus_musculus)_(DBD_0.89) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(ey)_(Mus_musculus)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0054031 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.FBgn0054031 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0261705 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.FBgn0261705 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0261930 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.FBgn0261930 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0262477 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.FBgn0262477 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0262582 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.FBgn0262582 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0262656 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.FBgn0262656 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0262975 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.FBgn0262975 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0263112 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.FBgn0263112 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0263118 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.FBgn0263118 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0263239 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.FBgn0263239 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBgn0263240 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.FBgn0263240 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBpp0073832 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.FBpp0073832 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.FBpp0292044 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.FBpp0292044 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(fd59A)_(Homo_sapiens)_(DBD_0.89) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(fd59A)_(Homo_sapiens)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.fd64A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.fd64A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(fd96Ca)_(Mus_musculus)_(DBD_0.88) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(fd96Ca)_(Mus_musculus)_(DBD_0.88) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Fer1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Fer1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Fer2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Fer2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Fer3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Fer3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.fkh 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.fkh -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.foxo 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.foxo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.fru 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.fru -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ftz 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ftz -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ftz-f1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ftz-f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.GATAd 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.GATAd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.GATAe 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.GATAe -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.gcm2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.gcm2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.gl 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.gl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.grh 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.grh -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(grn)_(Homo_sapiens)_(DBD_0.93) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(grn)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Gsc 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Gsc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.gt 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.gt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.h 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.h -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(H15)_(Mus_musculus)_(DBD_0.69) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(H15)_(Mus_musculus)_(DBD_0.69) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hand 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Hand -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.hb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.hb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.her 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.her -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Her 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Her -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hey 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Hey -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HGTX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.HGTX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.hkb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.hkb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(HLH106)_(Homo_sapiens)_(DBD_0.80) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(HLH106)_(Homo_sapiens)_(DBD_0.80) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(HLH3B)_(Homo_sapiens)_(DBD_0.81) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(HLH3B)_(Homo_sapiens)_(DBD_0.81) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLH4C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.HLH4C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLH54F 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.HLH54F -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHm3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.HLHm3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHm5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.HLHm5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHm7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.HLHm7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHmbeta 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.HLHmbeta -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHmdelta 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.HLHmdelta -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.HLHmgamma 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.HLHmgamma -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hmx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Hmx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hnf4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Hnf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Hr38)_(Homo_sapiens)_(DBD_0.90) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(Hr38)_(Homo_sapiens)_(DBD_0.90) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Hr4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr46 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Hr46 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr51 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Hr51 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr78 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Hr78 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hr83 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Hr83 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Hsf 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Hsf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ind 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ind -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.inv 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.inv -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.jigr1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.jigr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.jim 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.jim -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Jra 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Jra -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.kay 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.kay -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ken 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ken -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.klu 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.klu -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.kni 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.kni -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.knrl 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.knrl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Kr 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Kr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.l(1)sc 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.l(1)sc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.l(3)neo38 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.l(3)neo38 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Lag1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Lag1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Lim3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Lim3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.lmd 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.lmd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.lola 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.lola -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.luna 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.luna -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(lz)_(Mus_musculus)_(DBD_0.71) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(lz)_(Mus_musculus)_(DBD_0.71) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mad 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Mad -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Max 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Max -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Med 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Med -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mef2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Mef2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mes2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Mes2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Met 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Met -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mio 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Mio -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(mip120)_(Drosophila_yakuba)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(mip120)_(Drosophila_yakuba)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.mirr 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.mirr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Mnf)_(Mus_musculus)_(DBD_0.79) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(Mnf)_(Mus_musculus)_(DBD_0.79) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Mnt 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Mnt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(mor)_(Homo_sapiens)_(DBD_0.89) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(mor)_(Homo_sapiens)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Myb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Myb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.nau 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.nau -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.net 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.net -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(NFAT)_(Gallus_gallus)_(DBD_0.58) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(NFAT)_(Gallus_gallus)_(DBD_0.58) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(NfI)_(Homo_sapiens)_(DBD_0.80) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(NfI)_(Homo_sapiens)_(DBD_0.80) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Nf-YA)_(Homo_sapiens)_(DBD_0.84) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(Nf-YA)_(Homo_sapiens)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.NK7.1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.NK7.1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.nub 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.nub -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.oc 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.oc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.odd 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.odd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.OdsH 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.OdsH -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Oli 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Oli -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.onecut 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.onecut -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.opa 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.opa -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Optix 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Optix -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(org-1)_(Mus_musculus)_(DBD_0.70) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(org-1)_(Mus_musculus)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.otp 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.otp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ovo 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ovo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pad 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.pad -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pan 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.pan -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Pdp1)_(Homo_sapiens)_(DBD_0.68) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(Pdp1)_(Homo_sapiens)_(DBD_0.68) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.peb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.peb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pfk 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.pfk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pho 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.pho -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.phol 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.phol -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pnr 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.pnr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.pnt 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.pnt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Poxm 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Poxm -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Poxn 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Poxn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Pph13 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Pph13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(prd)_(Homo_sapiens)_(DBD_0.77) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(prd)_(Homo_sapiens)_(DBD_0.77) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ptx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Ptx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.repo 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.repo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.retn 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.retn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Rfx)_(Apis_mellifera)_(DBD_0.78) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(Rfx)_(Apis_mellifera)_(DBD_0.78) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.rib 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.rib -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.rn 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.rn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ro 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ro -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.run 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.run -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(RunxA)_(Homo_sapiens)_(DBD_0.73) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(RunxA)_(Homo_sapiens)_(DBD_0.73) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Rx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Rx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sage 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.sage -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sc 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.sc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Scr 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Scr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(scro)_(Homo_sapiens)_(DBD_0.93) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(scro)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.scrt 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.scrt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sd 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.sd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sens 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.sens -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sens-2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.sens-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.shn 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.shn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Side 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Side -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sim 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.sim -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sima 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.sima -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.slbo 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.slbo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.slou 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.slou -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.slp1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.slp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.slp2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.slp2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.so 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.so -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sob 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.sob -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Sox14 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Sox14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Sox15 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Sox15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Sox21a)_(Mus_musculus)_(DBD_0.93) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(Sox21a)_(Mus_musculus)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Sox21b)_(Mus_musculus)_(DBD_0.93) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(Sox21b)_(Mus_musculus)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Sp1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Sp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sqz 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.sqz -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sr 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.sr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.srp 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.srp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ss 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ss -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.STAT92E 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.STAT92E -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sug 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.sug -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Su(H) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Su(H) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.SU(HW) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.SU(HW) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.sv 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.sv -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.svp 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.svp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tai 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.tai -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tap 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.tap -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(Tbp)_(Homo_sapiens)_(DBD_0.90) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(Tbp)_(Homo_sapiens)_(DBD_0.90) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tgo 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.tgo -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tin 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.tin -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tj 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.tj -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tll 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.tll -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(toy)_(Homo_sapiens)_(DBD_0.84) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(toy)_(Homo_sapiens)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Trl 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Trl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.ttk 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.ttk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.tup 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.tup -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.twi 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.twi -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Ubx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Ubx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.unc-4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.unc-4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Usf 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Usf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.usp 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.usp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.vfl 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.vfl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.vri 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.vri -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Vsx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Vsx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Vsx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Vsx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.wor 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.wor -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.Xrp1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.Xrp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.(yps)_(Homo_sapiens)_(DBD_0.82) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.(yps)_(Homo_sapiens)_(DBD_0.82) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.z 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.z -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.zen 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.zen -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/dm6/sequence/dm6.fa FIMO-CIS-BP-Drosophila_melanogaster.fimo.txt.annotated.zen2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Drosophila_melanogaster.zen2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.AC226150.2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.AC226150.2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.AHR 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.AHR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.AIRE 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.AIRE -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ALX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ALX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ALX3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ALX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ALX4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ALX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.AR 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.AR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ARID2)_(Saccharomyces_cerevisiae)_(DBD_0.26) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ARID2)_(Saccharomyces_cerevisiae)_(DBD_0.26) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARID3A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ARID3A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ARID3B)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ARID3B)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ARID3C)_(Mus_musculus)_(DBD_0.87) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ARID3C)_(Mus_musculus)_(DBD_0.87) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ARID5A)_(Mus_musculus)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ARID5A)_(Mus_musculus)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARID5B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ARID5B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARNT 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ARNT -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARNT2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ARNT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARNTL 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ARNTL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ARX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ASCL2)_(Mus_musculus)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ASCL2)_(Mus_musculus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ATF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ATF2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ATF2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ATF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ATF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ATF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ATF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ATF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ATOH1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ATOH1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ATOH8)_(Drosophila_melanogaster)_(DBD_0.70) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ATOH8)_(Drosophila_melanogaster)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BACH1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BACH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BACH2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BACH2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(BARHL1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(BARHL1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BARHL2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BARHL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BARX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BARX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BARX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BARX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BATF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BATF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BATF3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BATF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(BBX)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(BBX)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BCL11A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BCL11A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BCL6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BCL6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BCL6B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BCL6B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHA15 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BHLHA15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE22 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BHLHE22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE23 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BHLHE23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE40 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BHLHE40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE41 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BHLHE41 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BPTF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BPTF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BRCA1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BRCA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BSX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.BSX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.C11orf9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.C11orf9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CBFB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CBFB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CDC5L 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CDC5L -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CDX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CDX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CDX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CDX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CEBPA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CEBPB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPD 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CEBPD -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPE 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CEBPE -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPG 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CEBPG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPZ 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CEBPZ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CENPB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CENPB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CGBP 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CGBP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(CIC)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(CIC)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CLOCK 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CLOCK -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CPEB1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CPEB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREB1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CREB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREB3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CREB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREB3L1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CREB3L1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(CREB3L2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(CREB3L2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(CREB5)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(CREB5)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREM 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CREM -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CRX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CRX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CTCF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCFL 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CTCFL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CUX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CUX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CUX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CUX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CXXC1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.CXXC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DBP 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DBP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(DBX2)_(Mus_musculus)_(DBD_0.93) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(DBX2)_(Mus_musculus)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DDIT3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DDIT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DLX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DLX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DLX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DLX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DLX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DLX6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DLX6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMBX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DMBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMRT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DMRT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMRT2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DMRT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMRT3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DMRT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DMRTA2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DMRTA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(DMRTC2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(DMRTC2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DNMT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DNMT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DPRX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DPRX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DRGX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DRGX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DUX4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DUX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.DUXA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.DUXA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.E2F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.E2F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.E2F3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.E2F4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.E2F5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.E2F6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.E2F7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.E2F8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E4F1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.E4F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EBF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EGR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EGR2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EGR3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EGR4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EHF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EHF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ELF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ELF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ELF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ELF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ELF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELK1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ELK1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELK3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ELK3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELK4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ELK4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EMX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EMX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EMX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EMX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EN1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EN1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EN2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EN2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ENO1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ENO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ENSG00000229544)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ENSG00000229544)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ENSG00000235187)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ENSG00000235187)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ENSG00000250542)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ENSG00000250542)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EOMES 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EOMES -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EPAS1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EPAS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ERF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ERF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ERG 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ERG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ESR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESR2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ESR2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESRRA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ESRRA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESRRB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ESRRB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESRRG 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ESRRG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ESX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETS1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ETS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETS2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ETS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ETV1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ETV2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ETV3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ETV4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ETV5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ETV6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ETV7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EVX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EVX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EVX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.EVX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FERD3L)_(Drosophila_melanogaster)_(DBD_0.89) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(FERD3L)_(Drosophila_melanogaster)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FEV 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FEV -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FEZF1)_(Drosophila_melanogaster)_(DBD_0.91) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(FEZF1)_(Drosophila_melanogaster)_(DBD_0.91) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FIGLA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FIGLA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FLI1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FLI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOS 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOS -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOSB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOSB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOSL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOSL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOSL2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOSL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXA1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXA2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXA3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXA3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXB1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXB2)_(Mus_musculus)_(DBD_0.94) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(FOXB2)_(Mus_musculus)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXC1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXC2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXD1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXD2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXD3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXD3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXD4L2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXD4L2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXG1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXH1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXI1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXJ1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(FOXJ1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXJ2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXJ2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXJ3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXJ3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXK1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXK1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXK2)_(Mus_musculus)_(DBD_0.90) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(FOXK2)_(Mus_musculus)_(DBD_0.90) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXL2)_(Mus_musculus)_(DBD_0.70) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(FOXL2)_(Mus_musculus)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(FOXN3)_(Strongylocentrotus_purpuratus)_(DBD_0.44) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(FOXN3)_(Strongylocentrotus_purpuratus)_(DBD_0.44) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXO1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXO3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXO3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXO4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXO4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXO6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXO6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXP2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXP3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXQ1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FOXQ1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FUBP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.FUBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GABPA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GATA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GATA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GATA3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GATA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GATA5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GATA6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GATA6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GBX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GBX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GBX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GCM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GCM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GCM2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GCM2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GFI1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GFI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GFI1B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GFI1B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLI1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GLI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLI2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GLI2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLI3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GLI3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLIS1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GLIS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLIS2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GLIS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GLIS3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GLIS3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GMEB1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GMEB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GMEB2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GMEB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GRHL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GRHL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GSC 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GSC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GSC2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GSC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GSX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GSX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GSX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.GSX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HAND1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HAND1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HBP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HDX)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HDX)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HES1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HES1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HES2)_(Mus_musculus)_(DBD_0.83) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HES2)_(Mus_musculus)_(DBD_0.83) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HES5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HES5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HES7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HES7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HESX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HESX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HEY1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HEY1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HEY2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HEY2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HHEX)_(Caenorhabditis_elegans)_(DBD_0.77) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HHEX)_(Caenorhabditis_elegans)_(DBD_0.77) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIC1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HIC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIC2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HIC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIF1A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HIF1A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HINFP 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HINFP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIVEP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HIVEP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HIVEP2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HIVEP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HLF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HLF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HLTF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HLTF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HLX)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HLX)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMBOX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HMBOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HMG20B)_(Mus_musculus)_(DBD_0.94) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HMG20B)_(Mus_musculus)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMGA1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HMGA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMGA2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HMGA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HMX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HMX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HMX3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HMX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HNF1A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HNF1A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HNF1B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HNF1B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HNF4A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HNF4A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HNF4G 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HNF4G -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOMEZ 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOMEZ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXA11)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HOXA11)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA13 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXA13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXA3)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HOXA3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXA4)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HOXA4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXA5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXA6)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HOXA6)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXA7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXA9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXA9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB13 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXB13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXB4)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HOXB4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXB5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXB6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXB7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXB8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXB8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC10 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXC10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC11 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXC11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC12 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXC12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC13 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXC13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXC5)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HOXC5)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXC6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXC8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXC8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXC9)_(Mus_musculus)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HOXC9)_(Mus_musculus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD10 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXD10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD11 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXD11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD12 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXD12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD13 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXD13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXD1)_(Mus_musculus)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HOXD1)_(Mus_musculus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(HOXD3)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(HOXD3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXD4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXD8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HOXD9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HOXD9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HSF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HSF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSF4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HSF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSFY2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.HSFY2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ID2)_(Mus_musculus)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ID2)_(Mus_musculus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ID4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ID4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.INSM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.INSM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.IRF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.IRF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.IRF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.IRF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.IRF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(IRF6)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(IRF6)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.IRF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.IRF8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.IRF9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(IRX1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(IRX1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.IRX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(IRX4)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(IRX4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRX5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.IRX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ISL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ISL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ISL2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ISL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ISX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ISX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JDP2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.JDP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUN 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.JUN -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUNB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.JUNB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUND 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.JUND -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KDM2B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.KDM2B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.KLF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(KLF12)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(KLF12)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF13 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.KLF13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF14 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.KLF14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF15 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.KLF15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF16 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.KLF16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(KLF2)_(Mus_musculus)_(DBD_0.95) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(KLF2)_(Mus_musculus)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.KLF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.KLF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.KLF5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.KLF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(KLF7)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(KLF7)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.KLF8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(KLF9)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(KLF9)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LBX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.LBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LBX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.LBX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LCOR)_(Meleagris_gallopavo)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(LCOR)_(Meleagris_gallopavo)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LEF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.LEF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LHX1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(LHX1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LHX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.LHX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LHX3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.LHX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LHX4)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(LHX4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LHX5)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(LHX5)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LHX6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.LHX6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LHX8)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(LHX8)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LHX9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.LHX9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(LIN54)_(Gallus_gallus)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(LIN54)_(Gallus_gallus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LMX1A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.LMX1A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.LMX1B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.LMX1B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MAF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MAFA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MAFB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MAFF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFG 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MAFG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFK 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MAFK -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MAX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAZ 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MAZ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MBD2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MBD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MECOM 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MECOM -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MECP2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MECP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MEF2A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MEF2B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MEF2C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2D 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MEF2D -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEIS1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MEIS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEIS2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MEIS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEIS3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MEIS3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEOX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MEOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEOX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MEOX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MESP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MESP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MGA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MGA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MITF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MITF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MIXL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MIXL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MLL 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MLL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MLX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MLX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MLXIPL 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MLXIPL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(MLXIP)_(Mus_musculus)_(DBD_0.82) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(MLXIP)_(Mus_musculus)_(DBD_0.82) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MNT 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MNT -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MNX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MNX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MSC 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MSC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MSX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MSX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MSX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MSX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MTF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MTF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MXI1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MXI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MYB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYBL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MYBL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYBL2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MYBL2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYC 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MYC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(MYCL1)_(Mus_musculus)_(DBD_0.66) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(MYCL1)_(Mus_musculus)_(DBD_0.66) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYCN 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MYCN -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(MYF5)_(Mus_musculus)_(DBD_0.90) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(MYF5)_(Mus_musculus)_(DBD_0.90) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYF6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MYF6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYOD1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MYOD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYOG 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MYOG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(MYPOP)_(Mus_musculus)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(MYPOP)_(Mus_musculus)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MZF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.MZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NAIF1)_(Xenopus_tropicalis)_(DBD_0.71) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(NAIF1)_(Xenopus_tropicalis)_(DBD_0.71) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NANOG 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NANOG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NEUROD1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NEUROD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NEUROD2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NEUROD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NEUROG1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(NEUROG1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NEUROG2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NEUROG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFAT5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFAT5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFATC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFATC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFATC3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFATC4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFE2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2L1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFE2L1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2L2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFE2L2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFIA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFIA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFIB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFIB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFIL3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFIL3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFIX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFIX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFKB1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFKB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFKB2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFKB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFYA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFYB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYC 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NFYC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NHLH1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NHLH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NHLH2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(NHLH2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NKX1-1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(NKX1-1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX2-1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NKX2-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX2-2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NKX2-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NKX2-3)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(NKX2-3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX2-5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NKX2-5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX2-8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NKX2-8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX3-1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NKX3-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NKX3-2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NKX3-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NKX6-1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(NKX6-1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NOBOX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NOBOX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NOTO 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NOTO -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NPAS2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(NPAS2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(NPAS4)_(Drosophila_melanogaster)_(DBD_0.61) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(NPAS4)_(Drosophila_melanogaster)_(DBD_0.61) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR0B1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR0B1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1D1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR1D1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1H2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR1H2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1H4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR1H4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1I2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR1I2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR1I3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR1I3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR2C1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR2C2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2E1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR2E1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2E3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR2E3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2F1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR2F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2F2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR2F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2F6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR2F6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR3C1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR3C1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR3C2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR3C2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR4A1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR4A1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR4A2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR4A2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR4A3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR4A3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR5A1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR5A1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR5A2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR5A2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR6A1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NR6A1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NRF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NRF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NRL 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.NRL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OLIG1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.OLIG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OLIG2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.OLIG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OLIG3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.OLIG3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ONECUT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ONECUT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ONECUT2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ONECUT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ONECUT3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ONECUT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(OSR1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(OSR1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(OSR2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(OSR2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(OTP)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(OTP)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OTX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.OTX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OTX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.OTX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.OVOL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.OVOL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PAX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PAX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PAX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PAX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PAX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PAX6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PAX7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PAX8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PAX9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PBX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PBX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PBX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PBX3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PBX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PDX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PDX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PGR 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PGR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PHOX2A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PHOX2A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PHOX2B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PHOX2B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PITX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PITX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PITX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PITX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PITX3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PITX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PKNOX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PKNOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PKNOX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PKNOX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PLAG1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PLAG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PLAGL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PLAGL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU1F1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU1F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU2F1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU2F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU2F2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU2F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU2F3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU2F3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU3F1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU3F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU3F2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU3F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU3F3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU3F3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU3F4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU3F4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU4F1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU4F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU4F2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU4F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU4F3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU4F3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU5F1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU5F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU5F1B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU5F1B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU6F1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU6F1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU6F2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.POU6F2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PPARA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PPARA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PPARD 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PPARD -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PPARG 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PPARG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRDM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PRDM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRDM4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PRDM4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRKRIR 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PRKRIR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PROP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PROP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PROX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PROX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRRX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PRRX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PRRX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PRRX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PTF1A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PTF1A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PURA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.PURA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RARA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RARA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RARB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RARB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RARG 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RARG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RAX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RAX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RAX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RAX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RBPJ 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RBPJ -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REL 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.REL -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RELA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RELB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REST 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.REST -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RFX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RFX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RFX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RFX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RFX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(RFX6)_(Mus_musculus)_(DBD_0.66) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(RFX6)_(Mus_musculus)_(DBD_0.66) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(RFX7)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(RFX7)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RHOXF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RHOXF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RORA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RORA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(RORB)_(Tetraodon_nigroviridis)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(RORB)_(Tetraodon_nigroviridis)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RORC 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RORC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RREB1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RREB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RUNX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RUNX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RUNX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RUNX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RUNX3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RUNX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RXRA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RXRA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RXRB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RXRB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RXRG 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.RXRG -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SCRT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SCRT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SCRT2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SCRT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SHOX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SHOX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SHOX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SHOX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIM1)_(Drosophila_melanogaster)_(DBD_0.89) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SIM1)_(Drosophila_melanogaster)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SIX1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SIX2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX3)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SIX3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX4)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SIX4)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SIX5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SIX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SIX6)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SIX6)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SMAD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SMAD2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SMAD3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SMAD4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMARCC1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SMARCC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMARCC2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SMARCC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SNAI1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SNAI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SNAI2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SNAI2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SNAI3)_(Mus_musculus)_(DBD_0.75) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SNAI3)_(Mus_musculus)_(DBD_0.75) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOHLH2)_(Mus_musculus)_(DBD_0.84) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SOHLH2)_(Mus_musculus)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX10 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SOX10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX11)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SOX11)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX12)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SOX12)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX13 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SOX13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX14 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SOX14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX15 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SOX15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX17 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SOX17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX18 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SOX18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX1)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SOX1)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SOX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX21 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SOX21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX30)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SOX30)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX3)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SOX3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SOX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SOX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SOX6)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SOX6)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SOX7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SOX8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SOX9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SOX9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(SP5)_(Drosophila_melanogaster)_(DBD_0.93) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(SP5)_(Drosophila_melanogaster)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SP8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SP8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPDEF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SPDEF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPI1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SPI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPIB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SPIB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPIC 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SPIC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPZ1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SPZ1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SREBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SREBF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SRF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRY 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.SRY -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.STAT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.STAT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.STAT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.STAT4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT5A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.STAT5A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT5B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.STAT5B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.STAT6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.T 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.T -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TAL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TAL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBP 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TBP -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TBR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TBX10)_(Mus_musculus)_(DBD_0.87) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(TBX10)_(Mus_musculus)_(DBD_0.87) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX15 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TBX15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX19 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TBX19 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TBX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX20 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TBX20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX21 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TBX21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TBX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TBX4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TBX5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF12 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TCF12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TCF15)_(Drosophila_melanogaster)_(DBD_0.70) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(TCF15)_(Drosophila_melanogaster)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TCF21)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(TCF21)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TCF23)_(Mus_musculus)_(DBD_0.60) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(TCF23)_(Mus_musculus)_(DBD_0.60) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TCF3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TCF4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TCF7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF7L1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TCF7L1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF7L2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TCF7L2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TCFL5)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(TCFL5)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TEAD1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TEAD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TEAD3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TEAD3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TEAD4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TEAD4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TEF 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TEF -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TERF2)_(Mus_musculus)_(DBD_0.92) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(TERF2)_(Mus_musculus)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TET1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TET1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP2A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TFAP2A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP2B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TFAP2B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP2C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TFAP2C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP2D 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TFAP2D -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TFAP2E)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(TFAP2E)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFAP4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TFAP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFCP2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TFCP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TFCP2L1)_(Mus_musculus)_(DBD_0.95) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(TFCP2L1)_(Mus_musculus)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFDP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TFDP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFE3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TFE3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFEB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TFEB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TFEC 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TFEC -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TGIF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TGIF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TGIF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TGIF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TGIF2LX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TGIF2LX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.THAP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.THAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.THRA 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.THRA -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.THRB 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.THRB -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TLX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TLX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TLX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TLX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TP53 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TP53 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TP63 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TP63 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TP73 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TP73 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TWIST1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.TWIST1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(TWIST2)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(TWIST2)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.UBP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.UBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.UNCX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.UNCX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.USF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.USF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VAX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.VAX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VAX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.VAX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VDR 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.VDR -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VENTX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.VENTX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VSX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.VSX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.VSX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.VSX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(VTN)_(Mus_musculus)_(DBD_0.79) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(VTN)_(Mus_musculus)_(DBD_0.79) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.WT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.WT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.XBP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.XBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YBX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.YBX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.YY1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.YY2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBED1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZBED1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZBTB12)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZBTB12)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZBTB1)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZBTB1)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB33 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZBTB33 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZBTB3)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZBTB3)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZBTB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB49 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZBTB49 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZBTB6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB7A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZBTB7A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB7B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZBTB7B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB7C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZBTB7C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZEB1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZEB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZFHX2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZFHX2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZFHX3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZFHX3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZFP161)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZFP161)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZFX 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZFX -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZFY)_(Mus_musculus)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZFY)_(Mus_musculus)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZHX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZHX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZIC1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZIC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZIC2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZIC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZIC3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZIC3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZIC4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZIC4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZIC5)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZIC5)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZKSCAN1)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZKSCAN1)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZKSCAN3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZKSCAN3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF143 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF143 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF148 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF148 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF187)_(Mus_musculus)_(DBD_0.88) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZNF187)_(Mus_musculus)_(DBD_0.88) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF202)_(Mus_musculus)_(DBD_0.87) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZNF202)_(Mus_musculus)_(DBD_0.87) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF219 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF219 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF232 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF232 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF238 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF238 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF263 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF263 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF274 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF274 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF281)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZNF281)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF282 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF282 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF32)_(Mus_musculus)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZNF32)_(Mus_musculus)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF333 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF333 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF350 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF350 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF35)_(Mus_musculus)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZNF35)_(Mus_musculus)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF384 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF384 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF410 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF410 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF423 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF423 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF524 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF524 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF589 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF589 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF652)_(Mus_musculus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZNF652)_(Mus_musculus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF683 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF683 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF691)_(Mus_musculus)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZNF691)_(Mus_musculus)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF713 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF713 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF740 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF740 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF75A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF75A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZNF76)_(Xenopus_laevis)_(DBD_0.84) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZNF76)_(Xenopus_laevis)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF784 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZNF784 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.(ZSCAN10)_(Mus_musculus)_(DBD_0.82) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.(ZSCAN10)_(Mus_musculus)_(DBD_0.82) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZSCAN16 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZSCAN16 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/hg20/sequence/hg38.fa FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZSCAN4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Homo_sapiens.hg20.ZSCAN4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.9430076C15Rik 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.9430076C15Rik -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.AC189028.1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.AC189028.1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ahctf1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Ahctf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ahr)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Ahr)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Alx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Alx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Alx3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Alx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Alx4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Alx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ar 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Ar -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Arid2)_(Saccharomyces_cerevisiae)_(DBD_0.26) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Arid2)_(Saccharomyces_cerevisiae)_(DBD_0.26) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arid3a 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Arid3a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arid3b 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Arid3b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arid5a 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Arid5a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arid5b 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Arid5b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arnt 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Arnt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arnt2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Arnt2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arntl 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Arntl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Arx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Arx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ascl2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Ascl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Atf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Atf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Atf3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Atf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Atf5)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Atf5)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Atf6)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Atf6)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atf7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Atf7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Atoh1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Atoh1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Atoh8)_(Drosophila_melanogaster)_(DBD_0.70) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Atoh8)_(Drosophila_melanogaster)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Bach1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Bach1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Bach2)_(Homo_sapiens)_(DBD_0.72) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Bach2)_(Homo_sapiens)_(DBD_0.72) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Barhl1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Barhl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Barhl2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Barhl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Barx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Barx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Barx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Barx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Batf3)_(Homo_sapiens)_(DBD_0.75) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Batf3)_(Homo_sapiens)_(DBD_0.75) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Batf)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Batf)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bbx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Bbx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Bcl11a)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Bcl11a)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bcl6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Bcl6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bcl6b 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Bcl6b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bhlha15 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Bhlha15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bhlhe22 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Bhlhe22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Bhlhe23)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Bhlhe23)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bhlhe40 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Bhlhe40 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bhlhe41 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Bhlhe41 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Bsx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Bsx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cdc5l)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Cdc5l)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cdx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Cdx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cdx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Cdx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cdx4)_(Homo_sapiens)_(DBD_0.91) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Cdx4)_(Homo_sapiens)_(DBD_0.91) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpa 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Cebpa -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Cebpb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpd 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Cebpd -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpe 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Cebpe -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cebpg 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Cebpg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cenpb)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Cenpb)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cic 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Cic -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Clock 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Clock -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cphx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Cphx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Creb1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Creb1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Creb3)_(Homo_sapiens)_(DBD_0.82) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Creb3)_(Homo_sapiens)_(DBD_0.82) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Creb3l2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Creb3l2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Crebzf 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Crebzf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Crem 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Crem -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Crx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Crx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ctcf 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Ctcf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ctcfl)_(Homo_sapiens)_(DBD_0.81) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Ctcfl)_(Homo_sapiens)_(DBD_0.81) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Cux1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Cux1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cux2)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Cux2)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Cxxc1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Cxxc1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dbp 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Dbp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dbx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Dbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dbx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Dbx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ddit3)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Ddit3)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Dlx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Dlx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Dlx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Dlx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dlx5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Dlx5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dlx6)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Dlx6)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dmbx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Dmbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrt1)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Dmrt1)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrt2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Dmrt2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrt3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Dmrt3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrta1)_(Drosophila_melanogaster)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Dmrta1)_(Drosophila_melanogaster)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Dmrta2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Dmrta2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dmrtc2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Dmrtc2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dnajc21 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Dnajc21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dobox4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Dobox4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Dux 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Dux -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Duxbl 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Duxbl -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f1)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(E2f1)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.E2f2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.E2f2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.E2f3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.E2f3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(E2f4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f5)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(E2f5)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f6)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(E2f6)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f7)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(E2f7)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E2f8)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(E2f8)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(E4f1)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(E4f1)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ebf1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Ebf1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Egr1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Egr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Egr2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Egr2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Egr3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Egr3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Egr4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Egr4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ehf 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Ehf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Elf1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Elf1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elf2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Elf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elf3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Elf3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elf4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Elf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elf5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Elf5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elk1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Elk1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elk3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Elk3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Elk4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Elk4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Emx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Emx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Emx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Emx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.En1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.En1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.En2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.En2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(ENSMUSG00000044690)_(Homo_sapiens)_(DBD_0.95) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(ENSMUSG00000044690)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.ENSMUSG00000079994 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.ENSMUSG00000079994 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(ENSMUSG00000090020)_(Strongylocentrotus_purpuratus)_(DBD_0.44) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(ENSMUSG00000090020)_(Strongylocentrotus_purpuratus)_(DBD_0.44) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Eomes 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Eomes -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Erf)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Erf)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Erg 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Erg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esr1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Esr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Esr2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Esr2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esrra 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Esrra -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esrrb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Esrrb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esrrg 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Esrrg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Esx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Esx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Ets1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Ets1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ets2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Ets2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Etv1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Etv2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Etv2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Etv3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Etv4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Etv5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Etv6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Etv6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Evx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Evx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Evx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Evx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ferd3l)_(Drosophila_melanogaster)_(DBD_0.89) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Ferd3l)_(Drosophila_melanogaster)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Fev)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Fev)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Fezf2)_(Drosophila_melanogaster)_(DBD_0.91) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Fezf2)_(Drosophila_melanogaster)_(DBD_0.91) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Figla 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Figla -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Fli1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Fli1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Fosb)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Fosb)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Fos)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Fos)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Fosl1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Fosl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Fosl2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Fosl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxa1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Foxa1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxa2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxa2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxa3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Foxa3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxb1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxb1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxc1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxc1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxc2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxc2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxd1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Foxd1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxd2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Foxd2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxd3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Foxd3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxf2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Foxf2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxg1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxg1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxh1)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Foxh1)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxi1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Foxi1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxj1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxj1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxj2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxj2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxj3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxj3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxk1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxk1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxl1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxm1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Foxm1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxn3)_(Homo_sapiens)_(DBD_0.45) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Foxn3)_(Homo_sapiens)_(DBD_0.45) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxo1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxo1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxo3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxo3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxo4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxo4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxo6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxo6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxp1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Foxp2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Foxp2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxp4)_(Homo_sapiens)_(DBD_0.87) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Foxp4)_(Homo_sapiens)_(DBD_0.87) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxq1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Foxq1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Foxs1)_(Homo_sapiens)_(DBD_0.78) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Foxs1)_(Homo_sapiens)_(DBD_0.78) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gabpa 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gabpa -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gata1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gata2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Gata2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gata3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gata4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gata5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gata6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gata6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gbx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gbx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gbx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gcm1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gcm1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gcm2)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Gcm2)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gfi1b 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gfi1b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gli1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Gli1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gli2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Gli2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gli3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gli3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Glis1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Glis1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Glis2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Glis2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Glis3)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Glis3)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm4830 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gm4830 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm4881 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gm4881 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm5294 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gm5294 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm5454 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gm5454 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gm98 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gm98 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gmeb1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gmeb1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gmeb2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gmeb2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Grhl1)_(Homo_sapiens)_(DBD_0.84) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Grhl1)_(Homo_sapiens)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gsc 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gsc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gsc2)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Gsc2)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Gsx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Gsx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Gsx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Gsx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hand1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hand1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hbp1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hbp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hdx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hdx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hes1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hes1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hes2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hes2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hes5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hes5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hes7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hes7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hesx1)_(Acipenser_baerii)_(DBD_0.79) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hesx1)_(Acipenser_baerii)_(DBD_0.79) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hey1)_(Homo_sapiens)_(DBD_0.95) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hey1)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hey2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hey2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hhex)_(Caenorhabditis_elegans)_(DBD_0.77) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hhex)_(Caenorhabditis_elegans)_(DBD_0.77) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hic1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hic1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hic2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hic2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hif3a)_(Homo_sapiens)_(DBD_0.74) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hif3a)_(Homo_sapiens)_(DBD_0.74) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hivep1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hivep1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hivep2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hivep2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hlf 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hlf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hlx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hlx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmbox1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hmbox1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmg20b 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hmg20b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hmga1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hmga1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmga2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hmga2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hmx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hmx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hmx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hmx3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hmx3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hnf1a 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hnf1a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hnf1b 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hnf1b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hnf4a 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hnf4a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hnf4g)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hnf4g)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Homez 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Homez -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxa1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa10 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxa10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa11 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxa11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa13 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxa13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxa2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxa3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxa4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxa5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxa6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxa7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxa9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxa9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb13 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxb13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hoxb1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hoxb1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxb3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxb4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxb5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxb6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxb7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxb8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxb8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hoxb9)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hoxb9)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc10 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxc10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc11 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxc11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc12 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxc12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc13 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxc13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxc4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxc6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxc8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxc9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxc9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxd1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd10 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxd10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd11 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxd11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hoxd12)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hoxd12)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd13 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxd13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxd3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hoxd4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hoxd4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxd8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Hoxd9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Hoxd9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hsf1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hsf1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hsf2)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hsf2)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hsf4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hsf4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Hsfy2)_(Homo_sapiens)_(DBD_0.71) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Hsfy2)_(Homo_sapiens)_(DBD_0.71) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Id2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Id2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Id4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Id4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Insm1)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Insm1)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.IRC900814 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.IRC900814 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Irf1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Irf1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Irf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Irf3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Irf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Irf5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Irf6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Irf7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irf9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Irf9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Irx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Irx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Irx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Irx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Irx5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Irx6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Irx6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Isl1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Isl1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Isl2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Isl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Isx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Isx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Jdp2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Jdp2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Jun 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Jun -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Junb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Junb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Jund 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Jund -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Kdm2b)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Kdm2b)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Klf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf12 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Klf12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf13)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Klf13)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf14)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Klf14)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf15)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Klf15)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf16)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Klf16)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Klf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Klf3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Klf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf5)_(Homo_sapiens)_(DBD_0.95) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Klf5)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Klf6)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Klf6)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Klf7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Klf8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Klf9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Klf9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Lbx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Lbx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lbx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Lbx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Lcor)_(Meleagris_gallopavo)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Lcor)_(Meleagris_gallopavo)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lef1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Lef1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Lhx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Lhx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Lhx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Lhx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Lhx5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Lhx6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Lhx8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lhx9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Lhx9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Lin54)_(Gallus_gallus)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Lin54)_(Gallus_gallus)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Lmx1a 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Lmx1a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mafa)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Mafa)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mafb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mafb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mafg 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mafg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Maf)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Maf)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mafk 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mafk -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Max 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Max -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Maz)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Maz)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mbd1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mbd1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mbd2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Mbd2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mbtps2)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Mbtps2)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mecom 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mecom -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mecp2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mecp2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mef2a)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Mef2a)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mef2b)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Mef2b)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mef2c)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Mef2c)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mef2d)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Mef2d)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meis1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Meis1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meis2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Meis2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meis3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Meis3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meox1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Meox1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Meox2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Meox2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mesp2)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Mesp2)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mga)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Mga)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mitf 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mitf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mixl1)_(Homo_sapiens)_(DBD_0.95) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Mixl1)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mlx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mlx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mlxip 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mlxip -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Mlxipl)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Mlxipl)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mnt 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mnt -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mnx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mnx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Msc 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Msc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Msx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Msx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Msx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Msx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Msx3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Msx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mtf1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mtf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Myb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mybl1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mybl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mybl2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mybl2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myc 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Myc -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mycn 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mycn -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myf6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Myf6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myod1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Myod1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Myog 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Myog -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mypop 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mypop -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Myt1l)_(Caenorhabditis_elegans)_(DBD_0.76) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Myt1l)_(Caenorhabditis_elegans)_(DBD_0.76) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Mzf1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Mzf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Naif1)_(Xenopus_tropicalis)_(DBD_0.71) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Naif1)_(Xenopus_tropicalis)_(DBD_0.71) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nanog 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nanog -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Neurod1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Neurod1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Neurod2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Neurod2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Neurog1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Neurog1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Neurog2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Neurog2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Neurog3)_(Homo_sapiens)_(DBD_0.91) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Neurog3)_(Homo_sapiens)_(DBD_0.91) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfat5)_(Gallus_gallus)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nfat5)_(Gallus_gallus)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfatc1)_(Monodelphis_domestica)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nfatc1)_(Monodelphis_domestica)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfatc2)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nfatc2)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfatc3)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nfatc3)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfatc4)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nfatc4)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfe2)_(Homo_sapiens)_(DBD_0.95) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nfe2)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfe2l1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nfe2l1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nfe2l2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nfe2l2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfia)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nfia)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfib)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nfib)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nfil3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nfil3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfix)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nfix)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfkb1)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nfkb1)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfkb2)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nfkb2)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nfya)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nfya)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nhlh1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nhlh1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nhlh2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nhlh2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx1-1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nkx1-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx1-2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nkx1-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nkx2-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nkx2-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nkx2-3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nkx2-4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nkx2-5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nkx2-6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx2-9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nkx2-9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx3-1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nkx3-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx3-2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nkx3-2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nkx6-1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nkx6-1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nkx6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nkx6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nobox 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nobox -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Noto 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Noto -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(NP_001076596.1)_(PBM_CONSTRUCTS)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(NP_001076596.1)_(PBM_CONSTRUCTS)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Npas2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Npas2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Npas4)_(Drosophila_melanogaster)_(DBD_0.61) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Npas4)_(Drosophila_melanogaster)_(DBD_0.61) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1d1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nr1d1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1h2)_(Homo_sapiens)_(DBD_0.94) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nr1h2)_(Homo_sapiens)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1h4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nr1h4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1i2)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nr1i2)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr1i3)_(Homo_sapiens)_(DBD_0.89) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nr1i3)_(Homo_sapiens)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2c1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nr2c1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr2c2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nr2c2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2e1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nr2e1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2e3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nr2e3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2f1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nr2f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2f2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nr2f2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr2f6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nr2f6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr3c1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nr3c1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr3c2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nr3c2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr4a1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nr4a1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr4a2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nr4a2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr4a3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nr4a3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr5a1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nr5a1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Nr5a2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Nr5a2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nr6a1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nr6a1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Nrl)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Nrl)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Obox1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Obox1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Obox3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Obox3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Obox5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Obox5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Obox6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Obox6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Olig1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Olig1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Olig2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Olig2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Olig3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Olig3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Onecut1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Onecut1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Onecut2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Onecut2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Onecut3)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Onecut3)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Osr1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Osr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Osr2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Osr2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Otp 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Otp -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Otx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Otx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Otx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Otx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ovol1)_(Homo_sapiens)_(DBD_0.94) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Ovol1)_(Homo_sapiens)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ovol2)_(Caenorhabditis_elegans)_(DBD_0.70) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Ovol2)_(Caenorhabditis_elegans)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Pax1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pax2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pax2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Pax3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pax4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pax4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax5)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Pax5)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pax6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pax6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pax7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pax7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax8)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Pax8)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pax9)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Pax9)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pbx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pbx2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Pbx2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pbx3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Pbx3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pdx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pdx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pgr)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Pgr)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Phf21a 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Phf21a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Phox2a 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Phox2a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Phox2b 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Phox2b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pit1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pit1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pitx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pitx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pitx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pitx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pitx3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pitx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pknox1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pknox1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pknox2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pknox2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Plag1)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Plag1)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Plagl1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Plagl1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou1f1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pou1f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou2f1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pou2f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou2f2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pou2f2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou2f3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pou2f3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou3f1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pou3f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou3f2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pou3f2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou3f3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pou3f3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou3f4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pou3f4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pou4f1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Pou4f1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pou4f2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Pou4f2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou4f3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pou4f3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou5f1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pou5f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Pou6f1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Pou6f1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pou6f2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Pou6f2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ppara)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Ppara)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ppard)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Ppard)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Pparg)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Pparg)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Prdm11 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Prdm11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Prdm1)_(Drosophila_melanogaster)_(DBD_0.73) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Prdm1)_(Drosophila_melanogaster)_(DBD_0.73) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Prdm4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Prdm4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Prkrir)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Prkrir)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Prop1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Prop1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Prrx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Prrx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Prrx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Prrx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Prrxl1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Prrxl1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ptf1a)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Ptf1a)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rara 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rara -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rarb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rarb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rarg 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rarg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rax 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rax -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rbpj)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Rbpj)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rela 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rela -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Relb)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Relb)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rel)_(Homo_sapiens)_(DBD_0.93) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Rel)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rest)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Rest)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rfx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rfx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rfx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rfx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rfx5)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Rfx5)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rfx7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rfx8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rfx8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rhox11 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rhox11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rhox6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rhox6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rhox8)_(Rattus_norvegicus)_(DBD_0.95) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Rhox8)_(Rattus_norvegicus)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rora 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rora -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rorb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rorb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rorc)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Rorc)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Rreb1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Rreb1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Runx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Runx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Runx2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Runx2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Runx3)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Runx3)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rxra 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rxra -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rxrb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rxrb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Rxrg 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Rxrg -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Scrt1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Scrt1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Scrt2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Scrt2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sebox 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sebox -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Setbp1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Setbp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sfpi1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sfpi1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Shox2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Shox2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sim1)_(Drosophila_melanogaster)_(DBD_0.89) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Sim1)_(Drosophila_melanogaster)_(DBD_0.89) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Six1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Six2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Six3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Six4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Six5)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Six5)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Six6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Six6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smad1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Smad1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smad2)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Smad2)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Smad3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Smad3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smad4)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Smad4)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smarcc1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Smarcc1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Smarcc2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Smarcc2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Snai1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Snai1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Snai2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Snai2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sohlh2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sohlh2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox10 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox11 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox11 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox12 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox13 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox13 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox14 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox15 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox17 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox17 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox18 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox18 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox21 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox30 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox30 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sox8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sox8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sox9)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Sox9)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sp1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sp100 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sp100 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sp110 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sp110 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sp2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Sp2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sp3)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Sp3)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sp4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sp4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sp5)_(Drosophila_melanogaster)_(DBD_0.93) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Sp5)_(Drosophila_melanogaster)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Sp8)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Sp8)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Spdef 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Spdef -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Spib)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Spib)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Spic 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Spic -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Spz1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Spz1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Srebf1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Srebf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Srebf2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Srebf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Srf 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Srf -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Sry 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Sry -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Stat1)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Stat1)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Stat2)_(Homo_sapiens)_(DBD_0.81) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Stat2)_(Homo_sapiens)_(DBD_0.81) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Stat3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Stat3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Stat4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Stat4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Stat5a)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Stat5a)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Stat5b)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Stat5b)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Stat6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Stat6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.T 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.T -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tal1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Tal1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tbpl2)_(Homo_sapiens)_(DBD_0.85) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Tbpl2)_(Homo_sapiens)_(DBD_0.85) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbr1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tbr1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tbx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tbx15)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Tbx15)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tbx19)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Tbx19)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tbx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx20 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tbx20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tbx21)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Tbx21)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tbx3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tbx4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tbx5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tbx5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf12 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcf12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tcf15)_(Drosophila_melanogaster)_(DBD_0.70) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Tcf15)_(Drosophila_melanogaster)_(DBD_0.70) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf21 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcf21 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcf3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcf4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcf7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf7l1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcf7l1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcf7l2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcf7l2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap2a 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcfap2a -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap2b 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcfap2b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap2c 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcfap2c -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tcfap2d)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Tcfap2d)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap2e 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcfap2e -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfap4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcfap4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tcfcp2)_(Gallus_gallus)_(DBD_0.95) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Tcfcp2)_(Gallus_gallus)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfcp2l1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcfcp2l1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfe3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcfe3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfeb 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcfeb -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfec 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcfec -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tcfl5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tcfl5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tead3)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Tead3)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tead4)_(Homo_sapiens)_(DBD_0.94) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Tead4)_(Homo_sapiens)_(DBD_0.94) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tef 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tef -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Terf2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Terf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tfdp1)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Tfdp1)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tgif1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tgif1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tgif2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tgif2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Thra)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Thra)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Thrb)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Thrb)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Tlx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Tlx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Tlx2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Tlx2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Trp53 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Trp53 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Trp63)_(Homo_sapiens)_(DBD_0.86) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Trp63)_(Homo_sapiens)_(DBD_0.86) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Trp73 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Trp73 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Twist1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Twist1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Twist2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Twist2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ubp1)_(Homo_sapiens)_(DBD_0.93) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Ubp1)_(Homo_sapiens)_(DBD_0.93) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Uncx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Uncx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Usf1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Usf1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Usf2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Usf2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Vax1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Vax1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Vax2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Vax2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Vdr 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Vdr -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Vsx1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Vsx1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Vsx2)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Vsx2)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Wt1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Wt1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Xbp1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Xbp1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Ybx1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Ybx1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Yy1)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Yy1)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zbtb1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zbtb1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zbtb12 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zbtb12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zbtb3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zbtb3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb49)_(Homo_sapiens)_(DBD_0.95) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zbtb49)_(Homo_sapiens)_(DBD_0.95) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb4)_(Homo_sapiens)_(DBD_0.96) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zbtb4)_(Homo_sapiens)_(DBD_0.96) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb6)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zbtb6)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb7a)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zbtb7a)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zbtb7b 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zbtb7b -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zbtb7c)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zbtb7c)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zeb1)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zeb1)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp105 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp105 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp110)_(Homo_sapiens)_(DBD_0.85) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zfp110)_(Homo_sapiens)_(DBD_0.85) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp128 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp128 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp143)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zfp143)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp148)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zfp148)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp161 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp161 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp187 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp187 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp202 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp202 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp219)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zfp219)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp238)_(Homo_sapiens)_(DBD_1.00) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zfp238)_(Homo_sapiens)_(DBD_1.00) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp263 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp263 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp281 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp281 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp282)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zfp282)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp300 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp300 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp384)_(Homo_sapiens)_(DBD_0.99) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zfp384)_(Homo_sapiens)_(DBD_0.99) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp410 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp410 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp523)_(Xenopus_laevis)_(DBD_0.84) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zfp523)_(Xenopus_laevis)_(DBD_0.84) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp524)_(Homo_sapiens)_(DBD_0.92) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zfp524)_(Homo_sapiens)_(DBD_0.92) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp637 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp637 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp652 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp652 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp691 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp691 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp711 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp711 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfp740 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfp740 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp784)_(Homo_sapiens)_(DBD_0.98) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zfp784)_(Homo_sapiens)_(DBD_0.98) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zfp957)_(Arabidopsis_thaliana)_(DBD_0.40) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zfp957)_(Arabidopsis_thaliana)_(DBD_0.40) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zfx 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zfx -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zic1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zic1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zic2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zic2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zic3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zic3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zic4)_(Homo_sapiens)_(DBD_0.97) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zic4)_(Homo_sapiens)_(DBD_0.97) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zic5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zic5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zkscan1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zkscan1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.(Zkscan4)_(Homo_sapiens)_(DBD_0.85) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.(Zkscan4)_(Homo_sapiens)_(DBD_0.85) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zkscan5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zkscan5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zscan10 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zscan10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zscan20 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zscan20 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zscan4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zscan4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/mm10/sequence/mm10.fa FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.Zscan4c 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Mus_musculus.mm10.Zscan4c -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ABF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ABF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ABF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ABF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ACA1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ACA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ACE2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ACE2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ADR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ADR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.AFT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.AFT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARG5,6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ARG5,6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARG80 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ARG80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARG81 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ARG81 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARO80 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ARO80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ARR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ARR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.AZF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.AZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CAD1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.CAD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CAT8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.CAT8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CBF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.CBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CEP3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.CEP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CHA4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.CHA4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CIN5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.CIN5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CRZ1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.CRZ1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CST6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.CST6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CUP2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.CUP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.CUP9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.CUP9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DAL80 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.DAL80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DAL81 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.DAL81 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DAL82 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.DAL82 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DAT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.DAT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.DOT6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.DOT6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ECM22 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ECM22 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ECM23 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ECM23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.EDS1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.EDS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ERT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ERT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FHL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.FHL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FKH1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.FKH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FKH2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.FKH2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FYV5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.FYV5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.FZF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.FZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GAL4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.GAL4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GAT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.GAT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GAT3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.GAT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GAT4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.GAT4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GCN4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.GCN4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GCR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.GCR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GCR2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.GCR2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GIS1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.GIS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.GSM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.GSM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAC1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.HAC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAL9 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.HAL9 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.HAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAP3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.HAP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAP4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.HAP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HAP5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.HAP5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HCM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.HCM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HMRA1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.HMRA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HMRA2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.HMRA2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HMS1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.HMS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HMS2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.HMS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.HSF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.HSF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.IME1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.IME1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.IME4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.IME4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.INO2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.INO2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.INO4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.INO4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.IXR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.IXR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.KAR4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.KAR4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.LEU3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.LEU3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.LYS14 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.LYS14 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MAC1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.MAC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MATALPHA1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.MATALPHA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MBP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.MBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MCM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.MCM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MET31 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.MET31 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MET32 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.MET32 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MET4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.MET4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MGA1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.MGA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MIG1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.MIG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MIG2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.MIG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MIG3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.MIG3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MSN1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.MSN1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.MSN2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.MSN2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NDT80 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.NDT80 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NHP10 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.NHP10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NHP6A 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.NHP6A -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NHP6B 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.NHP6B -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NRG1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.NRG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.NRG2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.NRG2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.OAF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.OAF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.OPI1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.OPI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ORC1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ORC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.(ORC2)_(Mus_musculus)_(DBD_0.69) 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.(ORC2)_(Mus_musculus)_(DBD_0.69) -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PDC2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.PDC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PDR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.PDR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PDR3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.PDR3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PDR8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.PDR8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PHD1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.PHD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PHO4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.PHO4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PPR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.PPR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PUT3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.PUT3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.PZF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.PZF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RAP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RCO1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RCO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RDR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RDR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RDS1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RDS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RDS2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RDS2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.REB1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.REB1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.REI1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.REI1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RFX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RFX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RGT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RGT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RIM101 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RIM101 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RLM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RLM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RME1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RME1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ROX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ROX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RPH1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RPH1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RPN4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RPN4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RSC3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RSC3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RSC30 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RSC30 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RSF2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RSF2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RTG1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RTG1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.RTG3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.RTG3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SFL1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SFL1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SFP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SFP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SIP4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SIP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SKN7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SKN7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SKO1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SKO1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SMK1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SMK1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SMP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SMP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SNF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SNF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SNT2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SNT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SOK2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SOK2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SPT10 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SPT10 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SPT15 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SPT15 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SPT2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SPT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SPT23 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SPT23 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SRD1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SRD1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STB2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.STB2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STB3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.STB3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STB4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.STB4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STB5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.STB5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STE12 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.STE12 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.STP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STP2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.STP2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STP3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.STP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.STP4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.STP4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SUA7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SUA7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SUM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SUM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SUT1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SUT1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SUT2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SUT2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SWI4 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SWI4 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.SWI5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.SWI5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TBF1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.TBF1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TBS1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.TBS1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TEA1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.TEA1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TEC1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.TEC1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.THI2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.THI2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.THO2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.THO2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TOD6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.TOD6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TOS8 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.TOS8 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.TYE7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.TYE7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.UGA3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.UGA3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.UME1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.UME1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.UME6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.UME6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.UPC2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.UPC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.URC2 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.URC2 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.VHR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.VHR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.WAR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.WAR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.WTM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.WTM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.XBP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.XBP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YAP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP3 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YAP3 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP5 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YAP5 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP6 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YAP6 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YAP7 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YAP7 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YDR266C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YDR266C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YDR520C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YDR520C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YER130C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YER130C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YER184C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YER184C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YGR067C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YGR067C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YHP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YHP1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YKL222C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YKL222C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YLL054C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YLL054C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YLR278C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YLR278C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YML081W 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YML081W -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YNR063W 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YNR063W -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YOX1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YOX1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YPR013C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YPR013C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YPR015C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YPR015C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YPR022C 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YPR022C -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YPR196W 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YPR196W -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YRM1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YRM1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.YRR1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.YRR1 -minWidth 10
python ~/code/bisulfite/SMAC-seq-resolution-motifs.py ~/genomes/sacCer3/sequence/sacCer3.fa FIMO-CIS-BP-Saccharomyces_cerevisiae.fimo.txt.annotated.ZAP1 2 3 4 GC SMAC-seq-resolution-motifs-GC.CIS-BP-Saccharomyces_cerevisiae.ZAP1 -minWidth 10