python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/MethylationPercentageContext.py /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-NOME_dSMF/L133-Human_gDNA_CpG_GpC/L133-Human_gDNA_CpG_GpC.Bismark_v0.19.0.bowtie2.clip.hg20_pe.sorted.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38-male.fa CG,GC CG-GC.perc_meth.L133-Human_gDNA_CpG_GpC
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/MethylationPercentageContext.py /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-NOME_dSMF/L131-Human_gDNA_untreated/L131-Human_gDNA_untreated.Bismark_v0.19.0.bowtie2.clip.hg20.pe.sorted.dedup.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/sequence/hg38-male.fa CG,GC CG-GC.perc_meth.L131-Human_gDNA_untreated