rank motif_DB motif_ID motif_alt_ID consensus p-value adj_p-value E-value tests FASTA_max pos neg PWM_min TP %TP FP %FP 1 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1605_1.02 ENSMUSG00000079994 ATTSWHNNNN 3.17e-13 3.27e-8 2.35e-5 103306 4430 4430 171468 1.22 1980 44.70 67387 39.30 2 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1580_1.02 Hbp1 HHATWBNN 3.46e-13 3.41e-8 2.45e-5 98742 4430 4430 171468 1.05 2222 50.16 76642 44.70 3 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1579_1.02 Tcf7 TTTVHHNNN 5.23e-12 5.62e-7 4.04e-4 107417 4430 4430 171468 1.07 2324 52.46 81066 47.28 4 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0996_1.02 Hdx RNDATCA 7.08e-12 6.79e-7 4.88e-4 95898 4430 4430 171468 1.06 2172 49.03 75272 43.90 5 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1521_1.02 (Nfatc1)_(Monodelphis_domestica)_(DBD_0.98) NNTTTCCRNN 8.80e-12 9.66e-7 6.94e-4 109825 4430 4430 171468 1.15 2143 48.37 74201 43.27 6 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0632_1.02 (Dmrta2)_(Homo_sapiens)_(DBD_1.00) HHWGTWDYNN 2.42e-11 2.17e-6 1.56e-3 89732 4430 4430 171468 1.06 2185 49.32 76004 44.33 7 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0290_1.02 Mafk NWWDTGCNNN 5.03e-11 4.93e-6 3.54e-3 98011 4430 4430 171468 1.02 2567 57.95 90942 53.04 8 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1519_1.02 (Nfat5)_(Gallus_gallus)_(DBD_1.00) NTTTTCCAYN 9.36e-11 8.70e-6 6.25e-3 92950 4430 4430 171468 3.38 742 16.75 22859 13.33 9 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0130_1.02 Setbp1 NDNWWWWNHN 1.40e-10 1.12e-5 8.07e-3 80467 4430 4430 171468 1 2219 50.09 77655 45.29 10 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1590_1.02 Sox15 ATTSWNNNN 1.30e-10 1.25e-5 8.96e-3 96333 4430 4430 171468 1.07 2392 54.00 84321 49.18 11 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1033_1.02 Pou3f3 DWATKMRN 2.23e-10 1.70e-5 1.22e-2 76277 4430 4430 171468 1 2118 47.81 73871 43.08 12 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0987_1.02 Irx5 NDTGTHNNN 2.41e-10 2.07e-5 1.49e-2 86080 4430 4430 171468 1.01 2332 52.64 82124 47.89 13 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1598_1.02 Tcf7l1 NTTTSWWN 2.18e-10 2.39e-5 1.72e-2 109938 4430 4430 171468 1.2 1721 38.85 58789 34.29 14 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0132_1.02 Hmga2 NNNNRWWWWN 5.69e-10 4.46e-5 3.20e-2 78430 4430 4430 171468 1.01 2154 48.62 75443 44.00 15 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1593_1.02 Sox18 ATTGTNNN 8.46e-10 7.61e-5 5.47e-2 89997 4430 4430 171468 1.06 2251 50.81 79257 46.22 16 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0978_1.02 Cux1 NYDATCHN 1.91e-9 1.40e-4 1.01e-1 73679 4430 4430 171468 1.02 1872 42.26 64930 37.87 17 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0641_1.02 (Dmrta1)_(Drosophila_melanogaster)_(DBD_0.96) WGTWWCNWWW 1.77e-9 1.57e-4 1.13e-1 88776 4430 4430 171468 1.01 2424 54.72 86107 50.22 18 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1584_1.02 Sox8 ATTSWYNN 2.01e-9 1.89e-4 1.35e-1 93698 4430 4430 171468 1.08 2298 51.87 81255 47.39 19 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0735_1.02 Foxo6 NNVWMAAYAN 1.95e-9 1.93e-4 1.38e-1 98933 4430 4430 171468 1.07 2277 51.40 80437 46.91 20 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0942_1.02 Irx4 DTGTHNNN 3.11e-9 2.96e-4 2.12e-1 95252 4430 4430 171468 1 2564 57.88 91680 53.47 21 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0988_1.02 Irx6 DTGTHNN 4.02e-9 3.64e-4 2.61e-1 90566 4430 4430 171468 1 2453 55.37 87412 50.98 22 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1588_1.02 Sox10 ATTGWTNNN 4.09e-9 3.68e-4 2.64e-1 89863 4430 4430 171468 1.01 2415 54.51 85940 50.12 23 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1599_1.02 Sox21 ATTRTNNNN 4.14e-9 3.98e-4 2.86e-1 96123 4430 4430 171468 1.04 2437 55.01 86797 50.62 24 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1018_1.02 Hlx YHATNNN 1.32e-8 1.05e-3 7.54e-1 79378 4430 4430 171468 1.03 2041 46.07 71789 41.87 25 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1034_1.02 Dbx2 NHVATNA 1.48e-8 1.12e-3 8.02e-1 75287 4430 4430 171468 1 2060 46.50 72542 42.31 26 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6287_1.02 (Hsf2)_(Homo_sapiens)_(DBD_0.98) VGAABRTTCTAGAA 2.76e-8 1.20e-3 8.60e-1 43490 4430 4430 171468 1.06 1185 26.75 39763 23.19 27 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1057_1.02 Homez NNHWCGWDNN 2.42e-8 1.44e-3 1.03e0 59419 4430 4430 171468 1.02 1564 35.30 53839 31.40 28 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1600_1.02 Sox7 ATTGTNNN 1.92e-8 1.73e-3 1.24e0 90187 4430 4430 171468 1.07 2222 50.16 78824 45.97 29 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6554_1.02 (Zfp238)_(Homo_sapiens)_(DBD_1.00) TCCAGATGTTBVSS 5.73e-8 1.99e-3 1.43e0 34748 4430 4430 171468 1.03 1016 22.93 33700 19.65 30 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1301_1.02 Mecp2 NNNNHCAYNN 2.56e-8 2.23e-3 1.60e0 87035 4430 4430 171468 1.02 2235 50.45 79391 46.30 31 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1970_1.02 (Nfic)_(Homo_sapiens)_(DBD_0.95) TGCCAA 2.05e-8 2.41e-3 1.73e0 117227 4430 4430 171468 1.82 1116 25.19 37170 21.68 32 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0723_1.02 Foxg1 NNRWMAAYAN 2.37e-8 2.46e-3 1.76e0 103840 4430 4430 171468 1.12 2284 51.56 81264 47.39 33 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0118_1.02 (Zfp957)_(Arabidopsis_thaliana)_(DBD_0.40) NNNNDAAWT 2.93e-8 2.58e-3 1.86e0 88429 4430 4430 171468 1.11 2117 47.79 74882 43.67 34 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0991_1.02 Isl2 NTAAKDR 6.27e-8 5.38e-3 3.86e0 86095 4430 4430 171468 1.05 1989 44.90 70156 40.91 35 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0195_1.02 Msc DMCAKMTGKH 8.07e-8 6.85e-3 4.92e0 85264 4430 4430 171468 1.12 1983 44.76 69986 40.82 36 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1045_1.02 Hoxd10 WTWAYNNN 1.17e-7 9.73e-3 6.98e0 83655 4430 4430 171468 1 2271 51.26 81140 47.32 37 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0214_1.02 Tcf21 AACAKMTGK 2.10e-7 1.14e-2 8.15e0 54248 4430 4430 171468 1.15 1393 31.44 47904 27.94 38 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6279_1.02 (Hmga1)_(Homo_sapiens)_(DBD_1.00) AAAATWN 1.45e-7 1.23e-2 8.81e0 85387 4430 4430 171468 1.32 1781 40.20 62431 36.41 39 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0218_1.02 Bhlha15 SCATATGT 2.04e-7 1.25e-2 8.95e0 61393 4430 4430 171468 1.7 1184 26.73 40127 23.40 # AME (Analysis of Motif Enrichment): Version 5.0.5 compiled on Mar 31 2019 at 02:23:12 # The format of this file is described at http://meme-suite.org//doc/ame-output-format.html. # ame --control ../limbDnaseHotspotAllBulkAndSCTSSGood.fa -o AME-CISBP_Mus_musculus-limbDnaseHotspotAllBulkAndSCTSSGoodPerichondrium.0.2 ../limbDnaseHotspotAllBulkAndSCTSSGoodPerichondrium.0.2.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme