rank motif_DB motif_ID motif_alt_ID consensus p-value adj_p-value E-value tests FASTA_max pos neg PWM_min TP %TP FP %FP 1 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2300_1.02 Myog RRCAGCTGSNV 2.34e-26 1.77e-21 1.27e-18 75701 2011 2011 171468 9.42 363 18.05 17457 10.18 2 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2299_1.02 Myod1 NRNRRCAGCTGSN 3.00e-26 2.32e-21 1.67e-18 77239 2011 2011 171468 8.47 377 18.75 18409 10.74 3 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2317_1.02 Tcf12 RACAGCTGSNV 4.65e-26 3.54e-21 2.54e-18 75981 2011 2011 171468 8.36 386 19.19 19055 11.11 4 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0178_1.02 Ascl2 NVCAGCTGBN 1.40e-23 1.51e-18 1.08e-15 107774 2011 2011 171468 3.12 527 26.21 29596 17.26 5 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0216_1.02 Nhlh2 NGCAGCTGYN 1.60e-20 1.40e-15 1.00e-12 87265 2011 2011 171468 4.39 338 16.81 17224 10.05 6 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2318_1.02 Tcf3 SMCAGCTGCHB 1.66e-19 1.42e-14 1.02e-11 85393 2011 2011 171468 5.26 511 25.41 29784 17.37 7 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M4971_1.02 (Ferd3l)_(Drosophila_melanogaster)_(DBD_0.89) GTVACAGVTG 4.61e-18 3.41e-13 2.45e-10 73958 2011 2011 171468 2.39 552 27.45 33362 19.46 8 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5571_1.02 (Id4)_(Homo_sapiens)_(DBD_1.00) DVCAGGTGYN 2.21e-16 1.45e-11 1.04e-8 65455 2011 2011 171468 1.66 636 31.63 40459 23.60 9 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5627_1.02 (Mesp2)_(Homo_sapiens)_(DBD_0.98) NVCAGGTGYD 1.12e-15 9.12e-11 6.55e-8 81548 2011 2011 171468 2.23 495 24.61 30032 17.51 10 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0203_1.02 Figla VCASSTGNN 2.06e-15 1.75e-10 1.26e-7 84892 2011 2011 171468 1.62 797 39.63 53623 31.27 11 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0219_1.02 Tcf4 VCAGGTGBN 8.19e-15 8.61e-10 6.18e-7 105141 2011 2011 171468 2.47 447 22.23 26808 15.63 12 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0209_1.02 Myf6 NCANCTGWY 1.17e-14 1.36e-9 9.74e-7 116061 2011 2011 171468 2.16 256 12.73 13281 7.75 13 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6358_1.02 (Neurod1)_(Homo_sapiens)_(DBD_1.00) SGGCAGRTGKSC 1.88e-14 1.36e-9 9.76e-7 72215 2011 2011 171468 1.4 815 40.53 55570 32.41 14 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1552_1.02 Sp110 NNNAGGGVN 1.50e-14 1.59e-9 1.14e-6 105903 2011 2011 171468 1.8 382 19.00 22153 12.92 15 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0176_1.02 Tcfap4 MCAKMTGDY 1.46e-11 1.49e-6 1.07e-3 102439 2011 2011 171468 1.39 918 45.65 65672 38.30 16 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2298_1.02 Meis1 NVNDGASTGACAGSW 9.35e-10 6.15e-5 4.41e-2 65758 2011 2011 171468 1.8 592 29.44 40376 23.55 17 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0394_1.02 Plagl1 NDGGGGCCMN 3.39e-9 2.69e-4 1.93e-1 79350 2011 2011 171468 1.41 653 32.47 45580 26.58 18 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0417_1.02 Egr1 NGMGKGGGYG 5.72e-9 4.30e-4 3.08e-1 75103 2011 2011 171468 1.5 600 29.84 41492 24.20 19 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6270_1.02 (Nhlh1)_(Homo_sapiens)_(DBD_1.00) RRGGMCGCAGCTGMKMCCCV 2.37e-8 6.07e-4 4.36e-1 25605 2011 2011 171468 8.13 117 5.82 5775 3.37 20 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0441_1.02 Zic3 CNCHGSRGGN 7.37e-9 6.14e-4 4.41e-1 83380 2011 2011 171468 1.3 501 24.91 33753 19.68 21 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5116_1.02 (Atoh8)_(Drosophila_melanogaster)_(DBD_0.70) RCCACCTGK 1.30e-8 1.02e-3 7.29e-1 78222 2011 2011 171468 1.53 814 40.48 59067 34.45 22 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0404_1.02 Zfp202 NNNKGGGGSV 1.34e-8 1.14e-3 8.16e-1 84984 2011 2011 171468 1.52 542 26.95 37128 21.65 23 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0406_1.02 Zbtb7b NNRGGGGKCN 1.68e-8 1.21e-3 8.66e-1 71720 2011 2011 171468 1.68 447 22.23 29762 17.36 24 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0082_1.02 Tcfap2a HGCCBBVGGS 2.22e-8 1.67e-3 1.20e0 75122 2011 2011 171468 1.12 900 44.75 66362 38.70 25 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2264_1.02 Atoh1 RCCAKCTG 2.67e-8 1.80e-3 1.29e0 67566 2011 2011 171468 1.44 716 35.60 51274 29.90 26 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0439_1.02 Zic2 CNCHGBRGGN 2.52e-8 2.05e-3 1.47e0 81275 2011 2011 171468 1.29 519 25.81 35487 20.70 27 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0412_1.02 Zic1 CNCMRCRGGN 5.11e-8 4.23e-3 3.04e0 82939 2011 2011 171468 1.37 487 24.22 33164 19.34 28 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0812_1.02 Gcm1 NATRCGGGY 1.08e-7 5.64e-3 4.05e0 52382 2011 2011 171468 1.01 700 34.81 50413 29.40 29 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6325_1.02 (Klf6)_(Homo_sapiens)_(DBD_1.00) GGGGGCKG 7.84e-8 6.05e-3 4.34e0 77300 2011 2011 171468 1.52 753 37.44 54635 31.86 30 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1956_1.02 (Rest)_(Homo_sapiens)_(DBD_0.98) TTCAGCACCATGGACAGCDCC 5.50e-7 6.18e-3 4.44e0 11279 2011 2011 171468 2.1 142 7.06 7859 4.58 31 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0084_1.02 Tcfap2c HSCCBSAGGS 1.81e-7 1.27e-2 9.14e0 70932 2011 2011 171468 1.12 848 42.17 62748 36.59 # AME (Analysis of Motif Enrichment): Version 5.0.5 compiled on Mar 31 2019 at 02:23:12 # The format of this file is described at http://meme-suite.org//doc/ame-output-format.html. # ame --control ../limbDnaseHotspotAllBulkAndSCTSSGood.fa -o AME-CISBP_Mus_musculus-limbDnaseHotspotAllBulkAndSCTSSGoodMuscle3.0.4 ../limbDnaseHotspotAllBulkAndSCTSSGoodMuscle3.0.4.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme