rank motif_DB motif_ID motif_alt_ID consensus p-value adj_p-value E-value tests FASTA_max pos neg PWM_min TP %TP FP %FP 1 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0082_1.02 Tcfap2a HGCCBBVGGS 1.12e-15 8.11e-11 5.82e-8 72650 1240 1240 171468 1.78 343 27.66 31524 18.38 2 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0421_1.02 Klf8 NGGGYGKGKN 4.68e-15 3.75e-10 2.69e-7 80236 1240 1240 171468 1.78 318 25.65 28896 16.85 3 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0443_1.02 Klf12 DGGGYGKGKY 4.38e-13 2.76e-8 1.98e-5 62935 1240 1240 171468 1.66 361 29.11 35121 20.48 4 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0085_1.02 Tcfap2e THGCCYSVGG 1.03e-12 6.74e-8 4.84e-5 65489 1240 1240 171468 1.85 299 24.11 27893 16.27 5 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0084_1.02 Tcfap2c HSCCBSAGGS 1.36e-12 9.28e-8 6.66e-5 68344 1240 1240 171468 1.45 430 34.68 43981 25.65 6 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0404_1.02 Zfp202 NNNKGGGGSV 1.37e-11 1.12e-6 8.07e-4 82125 1240 1240 171468 1.21 539 43.47 58746 34.26 7 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0405_1.02 Klf7 DGGGCGKGGY 2.14e-11 1.42e-6 1.02e-3 66226 1240 1240 171468 2.04 303 24.44 29123 16.98 8 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0417_1.02 Egr1 NGMGKGGGYG 1.98e-11 1.43e-6 1.03e-3 72421 1240 1240 171468 1.74 300 24.19 28744 16.76 9 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0439_1.02 Zic2 CNCHGBRGGN 2.34e-11 1.82e-6 1.31e-3 77846 1240 1240 171468 1.45 206 16.61 17863 10.42 10 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1552_1.02 Sp110 NNNAGGGVN 1.10e-10 1.14e-5 8.18e-3 103511 1240 1240 171468 1.52 390 31.45 40268 23.48 11 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0812_1.02 Gcm1 NATRCGGGY 9.17e-10 4.55e-5 3.27e-2 49588 1240 1240 171468 1.01 452 36.45 48854 28.49 12 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0394_1.02 Plagl1 NDGGGGCCMN 1.46e-9 1.11e-4 7.99e-2 76385 1240 1240 171468 1.15 548 44.19 61598 35.92 13 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6115_1.02 (Trp63)_(Homo_sapiens)_(DBD_0.86) CATGYCWGRRCHTGY 2.61e-9 1.25e-4 8.97e-2 47934 1240 1240 171468 1.17 400 32.26 42557 24.82 14 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6325_1.02 (Klf6)_(Homo_sapiens)_(DBD_1.00) GGGGGCKG 1.76e-9 1.32e-4 9.45e-2 74915 1240 1240 171468 1.16 584 47.10 66480 38.77 15 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0083_1.02 Tcfap2b TNSCCYSAGG 3.79e-9 2.26e-4 1.62e-1 59598 1240 1240 171468 1.13 483 38.95 53391 31.14 16 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2294_1.02 Klf1 WGGGTGTGGYH 5.39e-9 3.19e-4 2.29e-1 59132 1240 1240 171468 1.24 462 37.26 50786 29.62 17 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0412_1.02 Zic1 CNCMRCRGGN 5.23e-9 4.17e-4 2.99e-1 79717 1240 1240 171468 1.07 595 47.98 68392 39.89 18 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0441_1.02 Zic3 CNCHGSRGGN 9.77e-9 7.83e-4 5.62e-1 80109 1240 1240 171468 1.38 233 18.79 22405 13.07 19 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0414_1.02 Egr3 RCGTGGGYGD 1.70e-8 1.07e-3 7.68e-1 63096 1240 1240 171468 1.15 474 38.23 52786 30.78 20 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0422_1.02 Zic5 SYRGGGGGTM 1.91e-8 1.27e-3 9.09e-1 66197 1240 1240 171468 1.01 565 45.56 64887 37.84 21 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1871_1.02 Klf4 DGGGYGKGGC 3.08e-8 2.00e-3 1.43e0 64833 1240 1240 171468 2.34 359 28.95 38221 22.29 22 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5856_1.02 (Sp8)_(Homo_sapiens)_(DBD_1.00) RGKGGGCGTGGY 3.30e-8 2.13e-3 1.53e0 64427 1240 1240 171468 1.12 531 42.82 60572 35.33 23 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0406_1.02 Zbtb7b NNRGGGGKCN 6.42e-8 4.44e-3 3.18e0 69227 1240 1240 171468 1.71 262 21.13 26432 15.42 24 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6106_1.02 Trp73 KRCRTGTYNNGACATGYH 7.41e-7 1.01e-2 7.25e0 13689 1240 1240 171468 1.27 132 10.65 11805 6.88 25 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6553_1.02 (Zfp219)_(Homo_sapiens)_(DBD_1.00) GDGGGGGGYGGA 2.41e-7 1.34e-2 9.65e0 56168 1240 1240 171468 1.15 463 37.34 52421 30.57 # AME (Analysis of Motif Enrichment): Version 5.0.5 compiled on Mar 31 2019 at 02:23:12 # The format of this file is described at http://meme-suite.org//doc/ame-output-format.html. # ame --control ../limbDnaseHotspotAllBulkAndSCTSSGood.fa -o AME-CISBP_Mus_musculus-limbDnaseHotspotAllBulkAndSCTSSGoodEpithelial.0.4 ../limbDnaseHotspotAllBulkAndSCTSSGoodEpithelial.0.4.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme