rank motif_DB motif_ID motif_alt_ID consensus p-value adj_p-value E-value tests FASTA_max pos neg PWM_min TP %TP FP %FP 1 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1552_1.02 Sp110 NNNAGGGVN 3.77e-22 4.93e-17 3.54e-14 130624 33935 33935 171468 1.69 7625 22.47 34537 20.14 2 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0404_1.02 Zfp202 NNNKGGGGSV 9.40e-21 1.01e-15 7.22e-13 106995 33935 33935 171468 1.18 14846 43.75 70350 41.03 3 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0394_1.02 Plagl1 NDGGGGCCMN 3.40e-18 3.43e-13 2.47e-10 100967 33935 33935 171468 1.19 14178 41.78 67331 39.27 4 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0406_1.02 Zbtb7b NNRGGGGKCN 1.87e-15 1.70e-10 1.22e-7 90520 33935 33935 171468 1.35 10795 31.81 50855 29.66 5 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0439_1.02 Zic2 CNCHGBRGGN 8.01e-15 8.36e-10 6.00e-7 104295 33935 33935 171468 1.07 15636 46.08 75114 43.81 6 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0441_1.02 Zic3 CNCHGSRGGN 1.28e-13 1.36e-8 9.75e-6 106285 33935 33935 171468 1.33 7910 23.31 36868 21.50 7 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0422_1.02 Zic5 SYRGGGGGTM 1.66e-13 1.48e-8 1.06e-5 89143 33935 33935 171468 1.17 12687 37.39 60540 35.31 8 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0393_1.02 Glis2 NHGRGGGGTCN 3.12e-12 1.74e-7 1.25e-4 55943 33935 33935 171468 1.08 9171 27.03 43268 25.23 9 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0421_1.02 Klf8 NGGGYGKGKN 3.25e-12 3.34e-7 2.40e-4 102552 33935 33935 171468 1.02 17187 50.65 83342 48.60 10 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0429_1.02 Zfp740 NDKGGGGGGG 4.16e-12 3.37e-7 2.42e-4 80894 33935 33935 171468 1.05 13637 40.19 65508 38.20 11 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0412_1.02 Zic1 CNCMRCRGGN 4.97e-12 5.25e-7 3.77e-4 105548 33935 33935 171468 1.23 11457 33.76 54637 31.86 12 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0417_1.02 Egr1 NGMGKGGGYG 5.26e-11 4.99e-6 3.58e-3 94873 33935 33935 171468 1.33 11610 34.21 55564 32.40 13 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1443_1.02 Hnf4a NNTGRMCYYN 1.67e-10 1.55e-5 1.12e-2 92921 33935 33935 171468 1.11 10316 30.40 49208 28.70 14 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6127_1.02 Klf2 DGGGYGKGGYB 3.16e-10 2.69e-5 1.93e-2 84886 33935 33935 171468 1.23 13236 39.00 63821 37.22 15 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2391_1.02 (Klf5)_(Homo_sapiens)_(DBD_0.95) DGGGHGGGGC 3.03e-10 2.93e-5 2.11e-2 96739 33935 33935 171468 4.05 9395 27.69 44680 26.06 16 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0082_1.02 Tcfap2a HGCCBBVGGS 3.18e-10 3.00e-5 2.16e-2 94411 33935 33935 171468 1.37 11716 34.52 56225 32.79 17 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0409_1.02 Mzf1 DDGGGGATYN 4.32e-10 3.40e-5 2.44e-2 78634 33935 33935 171468 1.35 8884 26.18 42174 24.60 18 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1871_1.02 Klf4 DGGGYGKGGC 6.94e-10 5.70e-5 4.09e-2 82117 33935 33935 171468 1.71 10715 31.58 51296 29.92 19 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0084_1.02 Tcfap2c HSCCBSAGGS 1.04e-9 9.31e-5 6.69e-2 89792 33935 33935 171468 1.22 12819 37.78 61827 36.06 20 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0405_1.02 Klf7 DGGGCGKGGY 2.06e-9 1.75e-4 1.26e-1 85308 33935 33935 171468 1.13 13366 39.39 64621 37.69 21 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0403_1.02 Zfp711 NNDGGCCHNN 3.01e-9 2.64e-4 1.89e-1 87713 33935 33935 171468 1.4 10312 30.39 49402 28.81 22 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1970_1.02 (Nfic)_(Homo_sapiens)_(DBD_0.95) TGCCAA 4.36e-9 5.89e-4 4.23e-1 135156 33935 33935 171468 1.18 18551 54.67 90809 52.96 23 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6325_1.02 (Klf6)_(Homo_sapiens)_(DBD_1.00) GGGGGCKG 7.34e-9 7.07e-4 5.08e-1 96447 33935 33935 171468 1.01 16330 48.12 79629 46.44 24 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6482_1.02 (Sp3)_(Homo_sapiens)_(DBD_0.97) VGVVGGGGGCGGGGCBRGSS 8.28e-9 7.50e-4 5.38e-1 90561 33935 33935 171468 1.05 15431 45.47 75110 43.80 25 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0085_1.02 Tcfap2e THGCCYSVGG 1.27e-8 1.08e-3 7.78e-1 85023 33935 33935 171468 1.09 13465 39.68 65270 38.07 26 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0443_1.02 Klf12 DGGGYGKGKY 1.51e-8 1.23e-3 8.82e-1 81374 33935 33935 171468 1.01 13852 40.82 67226 39.21 27 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1668_1.02 (Prkrir)_(Homo_sapiens)_(DBD_1.00) NCCVNVSKRNNN 2.96e-8 1.27e-3 9.10e-1 42925 33935 33935 171468 1 7462 21.99 35445 20.67 28 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6420_1.02 (Plag1)_(Homo_sapiens)_(DBD_0.96) GGRGGSMHNWVKAGGGG 2.15e-8 1.67e-3 1.20e0 77650 33935 33935 171468 1.49 11021 32.48 53091 30.96 29 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1962_1.02 Tcfcp2l1 CYGGHTBRRRCTGG 4.32e-8 3.05e-3 2.19e0 70803 33935 33935 171468 1.05 11883 35.02 57455 33.51 30 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5856_1.02 (Sp8)_(Homo_sapiens)_(DBD_1.00) RGKGGGCGTGGY 5.90e-8 4.78e-3 3.43e0 81336 33935 33935 171468 1.04 13753 40.53 66850 38.99 31 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0397_1.02 Zfp263 GGGAGSAC 1.17e-7 1.03e-2 7.40e0 88447 33935 33935 171468 1.21 11645 34.32 56353 32.87 # AME (Analysis of Motif Enrichment): Version 5.0.5 compiled on Mar 31 2019 at 02:23:12 # The format of this file is described at http://meme-suite.org//doc/ame-output-format.html. # ame --control ../limbDnaseHotspotAllBulkAndSCTSSGood.fa -o AME-CISBP_Mus_musculus-limbDnaseHotspotAllBulkAndSCTSSGoodCombine.0.2 ../limbDnaseHotspotAllBulkAndSCTSSGoodCombine.0.2.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme