#!/bin/bash
#SBATCH --job-name=zAMEs-247
#SBATCH --output=zAMEs.247.out
#SBATCH --error=zAMEs.247.err
#SBATCH --time=24:00:00
#SBATCH -p akundaje,normal,owners
#SBATCH --cpus-per-task=1
#SBATCH --mem=20000
~/programs/meme-5.0.3/meme/bin/ame --control --shuffle-- -o AME-CISBP_Mus_musculus-mm10-refFlat-2014-10-26.Group15314 ../mm10-refFlat-2014-10-26.TSS-500bp.Group15314.merged.fa ~/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme