rank motif_DB motif_ID motif_alt_ID consensus p-value adj_p-value E-value tests FASTA_max pos neg PWM_min TP %TP FP %FP 1 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1071_1.02 Hoxd3 NTAATKRN 1.08e-9 1.24e-7 8.88e-5 115 29 29 87 1 27 93.10 26 29.89 2 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0981_1.02 Dlx5 TAATKRN 3.97e-9 4.57e-7 3.28e-4 115 29 29 87 1 27 93.10 28 32.18 3 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1027_1.02 Hoxa6 WTAATKRBN 3.97e-9 4.57e-7 3.28e-4 115 29 29 87 1 27 93.10 28 32.18 4 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0958_1.02 Lhx4 BYAATYW 6.22e-9 7.15e-7 5.13e-4 115 29 29 87 1 26 89.66 25 28.74 5 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0980_1.02 Nobox HTAATTRNN 7.44e-9 8.55e-7 6.14e-4 115 29 29 87 1 27 93.10 29 33.33 6 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0923_1.02 Phox2a NNTAATNN 1.37e-8 1.57e-6 1.13e-3 115 29 29 87 1 27 93.10 30 34.48 7 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0995_1.02 Gbx2 NTAATYR 1.37e-8 1.57e-6 1.13e-3 115 29 29 87 1 27 93.10 30 34.48 8 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1019_1.02 Prrx2 TAATTRN 1.37e-8 1.57e-6 1.13e-3 115 29 29 87 1 27 93.10 30 34.48 9 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1070_1.02 Hoxc4 NTAATKRNN 1.37e-8 1.57e-6 1.13e-3 115 29 29 87 1 27 93.10 30 34.48 10 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0984_1.02 Isx NNTAATTR 2.23e-8 2.57e-6 1.84e-3 115 29 29 87 1 26 89.66 27 31.03 11 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0927_1.02 Phox2b NNTAATNN 2.48e-8 2.85e-6 2.05e-3 115 29 29 87 1 27 93.10 31 35.63 12 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1011_1.02 Hoxa5 NTAATKRNN 2.48e-8 2.85e-6 2.05e-3 115 29 29 87 1 27 93.10 31 35.63 13 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1012_1.02 Hoxb4 NTAATKRNN 2.48e-8 2.85e-6 2.05e-3 115 29 29 87 1 27 93.10 31 35.63 14 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1039_1.02 Nkx1-2 NNTAATDRN 2.48e-8 2.85e-6 2.05e-3 115 29 29 87 1 27 93.10 31 35.63 15 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0990_1.02 Barx2 NTAATBRNN 2.82e-8 3.24e-6 2.33e-3 115 29 29 87 1 25 86.21 24 27.59 16 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1058_1.02 En1 NYAATYA 3.27e-8 3.76e-6 2.70e-3 115 29 29 87 1 28 96.55 36 41.38 17 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1055_1.02 Hoxb8 NTWATKRNN 4.11e-8 4.72e-6 3.39e-3 115 29 29 87 1 26 89.66 28 32.18 18 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0921_1.02 Vax1 NTAATDRNN 4.42e-8 5.08e-6 3.65e-3 115 29 29 87 1 27 93.10 32 36.78 19 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0928_1.02 Alx3 TAATTDN 4.42e-8 5.08e-6 3.65e-3 115 29 29 87 1 27 93.10 32 36.78 20 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0976_1.02 Pdx1 NTAATBDN 4.42e-8 5.08e-6 3.65e-3 115 29 29 87 1 27 93.10 32 36.78 21 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0997_1.02 Vax2 NTAATDRNN 4.42e-8 5.08e-6 3.65e-3 115 29 29 87 1 27 93.10 32 36.78 22 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1163_1.02 (Nkx6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) NWTAATKRN 4.42e-8 5.08e-6 3.65e-3 115 29 29 87 1 27 93.10 32 36.78 23 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0940_1.02 Msx2 NNYAATTA 5.32e-8 6.12e-6 4.39e-3 115 29 29 87 1 25 86.21 25 28.74 24 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0306_1.02 Atf4 NNVTTRCGHAHNN 6.68e-8 7.68e-6 5.51e-3 115 28 28 88 1 21 75.00 16 18.18 25 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0943_1.02 Otp NYTAATTR 7.44e-8 8.55e-6 6.14e-3 115 29 29 87 1 26 89.66 29 33.33 26 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1009_1.02 Hoxa7 NTWATKRNN 7.44e-8 8.55e-6 6.14e-3 115 29 29 87 1 26 89.66 29 33.33 27 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1025_1.02 Hoxd1 NNYVATYA 7.44e-8 8.55e-6 6.14e-3 115 29 29 87 1 26 89.66 29 33.33 28 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0905_1.02 Hoxa4 NTAATKRNN 7.77e-8 8.93e-6 6.41e-3 115 29 29 87 1 27 93.10 33 37.93 29 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1032_1.02 Prop1 NYAATTA 9.62e-8 1.11e-5 7.94e-3 115 29 29 87 1 28 96.55 38 43.68 30 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0107_1.02 Arid5b NNRTATTN 9.68e-8 1.11e-5 7.99e-3 115 29 29 87 1 23 79.31 20 22.99 31 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0989_1.02 Pou2f3 NNTWATKMR 1.32e-7 1.52e-5 1.09e-2 115 29 29 87 1 26 89.66 30 34.48 32 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1017_1.02 En2 NNYAATYA 1.32e-7 1.52e-5 1.09e-2 115 29 29 87 1 26 89.66 30 34.48 33 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0949_1.02 Hoxc5 NTAATDR 1.35e-7 1.55e-5 1.11e-2 115 29 29 87 1 27 93.10 34 39.08 34 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0960_1.02 Lmx1a NYAATHWN 1.35e-7 1.55e-5 1.11e-2 115 29 29 87 1 27 93.10 34 39.08 35 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1013_1.02 Hoxb5 NTAATBDNN 1.35e-7 1.55e-5 1.11e-2 115 29 29 87 1 27 93.10 34 39.08 36 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1033_1.02 Pou3f3 DWATKMRN 1.35e-7 1.55e-5 1.11e-2 115 29 29 87 1 27 93.10 34 39.08 37 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0991_1.02 Isl2 NTAAKDR 1.62e-7 1.86e-5 1.34e-2 115 29 29 87 1 28 96.55 39 44.83 38 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0926_1.02 Nanog NTAATNRNN 1.79e-7 2.05e-5 1.47e-2 115 29 29 87 1 25 86.21 27 31.03 39 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0979_1.02 Pax4 NTAATNNN 1.79e-7 2.05e-5 1.47e-2 115 29 29 87 1 25 86.21 27 31.03 40 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1036_1.02 Msx1 NTAATTR 1.79e-7 2.05e-5 1.47e-2 115 29 29 87 1 25 86.21 27 31.03 41 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0348_1.02 Nfil3 NRTTAYVN 1.99e-7 2.29e-5 1.65e-2 115 29 29 87 1 24 82.76 24 27.59 42 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1064_1.02 Gbx1 NNTAATTR 1.99e-7 2.29e-5 1.65e-2 115 29 29 87 1 24 82.76 24 27.59 43 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1034_1.02 Dbx2 NHVATNA 2.30e-7 2.65e-5 1.90e-2 115 29 29 87 1 27 93.10 35 40.23 44 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1051_1.02 Pou3f2 NTWATBHN 2.30e-7 2.65e-5 1.90e-2 115 29 29 87 1 27 93.10 35 40.23 45 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1232_1.02 Pou1f1 NHKMATTAN 2.32e-7 2.67e-5 1.91e-2 115 29 29 87 1 26 89.66 31 35.63 46 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1236_1.02 Pou2f1 HKMATWWNN 2.32e-7 2.67e-5 1.91e-2 115 29 29 87 1 26 89.66 31 35.63 47 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0304_1.02 Cebpa RTTDCGHAAY 2.41e-7 2.77e-5 1.99e-2 115 34 34 82 1 26 76.47 20 24.39 48 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0911_1.02 Mnx1 NTAATBRNNN 3.18e-7 3.66e-5 2.63e-2 115 29 29 87 1 25 86.21 28 32.18 49 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0935_1.02 Dlx4 NTAATTRN 3.18e-7 3.66e-5 2.63e-2 115 29 29 87 1 25 86.21 28 32.18 50 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0971_1.02 Pax7 NTAATYNN 3.18e-7 3.66e-5 2.63e-2 115 29 29 87 1 25 86.21 28 32.18 51 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0959_1.02 Prrx1 TAATTRRN 3.53e-7 4.05e-5 2.91e-2 115 29 29 87 1 23 79.31 22 25.29 52 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0916_1.02 Evx2 NNTAATBR 3.63e-7 4.18e-5 3.00e-2 115 29 29 87 1 24 82.76 25 28.74 53 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0967_1.02 Shox2 NTAATTRN 3.63e-7 4.18e-5 3.00e-2 115 29 29 87 1 24 82.76 25 28.74 54 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0982_1.02 Hoxa1 NTAATKRNB 3.63e-7 4.18e-5 3.00e-2 115 29 29 87 1 24 82.76 25 28.74 55 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1002_1.02 Gsx2 NTAATKRNN 3.63e-7 4.18e-5 3.00e-2 115 29 29 87 1 24 82.76 25 28.74 56 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1028_1.02 Emx2 NTAATKRNN 3.63e-7 4.18e-5 3.00e-2 115 29 29 87 1 24 82.76 25 28.74 57 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1125_1.02 Nkx1-1 NNTAATKRNN 3.63e-7 4.18e-5 3.00e-2 115 29 29 87 1 24 82.76 25 28.74 58 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0313_1.02 Cebpg NRTTRCRHMA 3.84e-7 4.42e-5 3.17e-2 115 34 34 82 1 27 79.41 23 28.05 59 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0130_1.02 Setbp1 NDNWWWWNHN 3.89e-7 4.48e-5 3.21e-2 115 29 29 87 1 27 93.10 36 41.38 60 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0914_1.02 Hoxc8 DTWATBDNN 3.89e-7 4.48e-5 3.21e-2 115 29 29 87 1 27 93.10 36 41.38 61 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0903_1.02 Hoxb6 TWWTNNN 4.00e-7 4.60e-5 3.30e-2 115 29 29 87 1 26 89.66 32 36.78 62 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0964_1.02 Hoxd8 NTWATNDN 4.00e-7 4.60e-5 3.30e-2 115 29 29 87 1 26 89.66 32 36.78 63 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1014_1.02 Hoxb7 NTWATKDN 4.00e-7 4.60e-5 3.30e-2 115 29 29 87 1 26 89.66 32 36.78 64 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0993_1.02 Barhl2 NTAAWYGNB 4.22e-7 4.85e-5 3.48e-2 115 30 30 86 1 25 83.33 26 30.23 65 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1063_1.02 Hmx1 HTAAKYGNNN 5.57e-7 6.40e-5 4.60e-2 115 29 29 87 1 25 86.21 29 33.33 66 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1045_1.02 Hoxd10 WTWAYNNN 6.49e-7 7.47e-5 5.36e-2 115 29 29 87 1 27 93.10 37 42.53 67 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0910_1.02 Dlx3 NTAATTRNN 6.50e-7 7.47e-5 5.37e-2 115 29 29 87 1 24 82.76 26 29.89 68 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0972_1.02 Uncx NTAATTDN 6.50e-7 7.47e-5 5.37e-2 115 29 29 87 1 24 82.76 26 29.89 69 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1024_1.02 Dlx1 NTAATTRNN 6.50e-7 7.47e-5 5.37e-2 115 29 29 87 1 24 82.76 26 29.89 70 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1040_1.02 Hoxb3 NTAATKRNN 6.50e-7 7.47e-5 5.37e-2 115 29 29 87 1 24 82.76 26 29.89 71 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1238_1.02 Pou3f1 NDMATWANN 6.81e-7 7.83e-5 5.62e-2 115 29 29 87 1 26 89.66 33 37.93 72 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0274_1.02 Cebpd RTTRCRHMA 7.34e-7 8.44e-5 6.06e-2 115 34 34 82 1 27 79.41 24 29.27 73 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0918_1.02 Evx1 NTAATBRNN 8.44e-7 9.70e-5 6.97e-2 115 14 14 102 1 14 100.00 33 32.35 74 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0992_1.02 Vsx1 NNTAATTRN 9.59e-7 1.10e-4 7.92e-2 115 29 29 87 1 25 86.21 30 34.48 75 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0961_1.02 Barhl1 NTAAWYGNN 1.04e-6 1.19e-4 8.57e-2 115 29 29 87 1 22 75.86 21 24.14 76 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1015_1.02 Lmx1b BYAATWH 1.07e-6 1.23e-4 8.84e-2 115 29 29 87 1 27 93.10 38 43.68 77 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0950_1.02 Dlx2 NTAATTRNN 1.14e-6 1.31e-4 9.41e-2 115 29 29 87 1 24 82.76 27 31.03 78 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0957_1.02 Msx3 TAATTRNN 1.14e-6 1.31e-4 9.41e-2 115 29 29 87 1 24 82.76 27 31.03 79 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0963_1.02 Lhx3 NNYTAATTA 1.14e-6 1.31e-4 9.41e-2 115 29 29 87 1 24 82.76 27 31.03 80 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0931_1.02 Lhx1 TAATTRNNN 1.14e-6 1.31e-4 9.43e-2 115 29 29 87 1 26 89.66 34 39.08 81 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0978_1.02 Cux1 NYDATCHN 1.14e-6 1.31e-4 9.43e-2 115 29 29 87 1 26 89.66 34 39.08 82 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1065_1.02 Noto NNTAATTANN 1.14e-6 1.31e-4 9.43e-2 115 29 29 87 1 26 89.66 34 39.08 83 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0998_1.02 Lbx2 NTAAYNRR 1.63e-6 1.87e-4 1.34e-1 115 29 29 87 1 25 86.21 31 35.63 84 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1020_1.02 Alx4 NTAATTRN 1.67e-6 1.92e-4 1.38e-1 115 14 14 102 1 14 100.00 35 34.31 85 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0132_1.02 Hmga2 NNNNRWWWWN 1.89e-6 2.17e-4 1.56e-1 115 29 29 87 1 26 89.66 35 40.23 86 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0904_1.02 Hoxa10 TTWAYKDBN 1.89e-6 2.17e-4 1.56e-1 115 29 29 87 1 26 89.66 35 40.23 87 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1007_1.02 Hoxa11 TTWAYKDBN 1.89e-6 2.17e-4 1.56e-1 115 29 29 87 1 26 89.66 35 40.23 88 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0932_1.02 Lhx9 HTAATKRN 2.06e-6 2.37e-4 1.70e-1 115 29 29 87 1 23 79.31 25 28.74 89 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1072_1.02 Hoxa3 NTAATKRNNN 2.06e-6 2.37e-4 1.70e-1 115 29 29 87 1 23 79.31 25 28.74 90 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1110_1.02 (Hhex)_(Caenorhabditis_elegans)_(DBD_0.77) NNNYMATNNN 2.06e-6 2.37e-4 1.70e-1 115 29 29 87 1 23 79.31 25 28.74 91 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1235_1.02 Pou2f2 HTVATTAN 2.71e-6 3.12e-4 2.24e-1 115 29 29 87 1 25 86.21 32 36.78 92 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0294_1.02 Atf1 NNKDRYRNND 3.09e-6 3.55e-4 2.55e-1 115 29 29 87 1 26 89.66 36 41.38 93 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1018_1.02 Hlx YHATNNN 3.09e-6 3.55e-4 2.55e-1 115 29 29 87 1 26 89.66 36 41.38 94 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1026_1.02 Hoxd11 TTWAYKRB 3.09e-6 3.55e-4 2.55e-1 115 29 29 87 1 26 89.66 36 41.38 95 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1056_1.02 Pou3f4 HTAATKMRNN 3.25e-6 3.73e-4 2.68e-1 115 30 30 86 1 26 86.67 33 38.37 96 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0939_1.02 Barx1 NNTAATBRNN 3.36e-6 3.86e-4 2.77e-1 115 29 29 87 1 22 75.86 23 26.44 97 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0954_1.02 Rax NNTAATTRV 3.36e-6 3.86e-4 2.77e-1 115 29 29 87 1 22 75.86 23 26.44 98 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0293_1.02 Tef NRTTAYRYVA 3.77e-6 4.33e-4 3.11e-1 115 29 29 87 1 20 68.97 18 20.69 99 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0988_1.02 Irx6 DTGTHNN 4.49e-6 5.16e-4 3.71e-1 115 29 29 87 1 27 93.10 41 47.13 100 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1054_1.02 Bsx NTAATBRNN 5.01e-6 5.76e-4 4.14e-1 115 29 29 87 1 21 72.41 21 24.14 101 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0975_1.02 Lhx5 TAATTRVNN 5.54e-6 6.37e-4 4.57e-1 115 29 29 87 1 24 82.76 30 34.48 102 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0314_1.02 Cebpb VTKDYGYAAB 5.84e-6 6.72e-4 4.82e-1 115 29 29 87 1 22 75.86 24 27.59 103 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0929_1.02 Hoxa2 NTAATKRNN 6.04e-6 6.95e-4 4.99e-1 115 29 29 87 1 23 79.31 27 31.03 104 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0408_1.02 Zkscan1 DNNYRYRNNH 6.28e-6 7.22e-4 5.18e-1 115 28 28 88 1 24 85.71 33 37.50 105 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0953_1.02 Pou4f3 NYTAATDW 7.95e-6 9.14e-4 6.56e-1 115 29 29 87 1 26 89.66 38 43.68 106 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0317_1.02 Dbp NVTTAYRYAA 8.92e-6 1.03e-3 7.36e-1 115 34 34 82 1 22 64.71 17 20.73 107 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0907_1.02 Meox1 NTAATKRNN 9.96e-6 1.14e-3 8.22e-1 115 29 29 87 1 22 75.86 25 28.74 108 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5502_1.02 (Gsx1)_(Homo_sapiens)_(DBD_1.00) NBTAATKRSN 9.96e-6 1.14e-3 8.22e-1 115 29 29 87 1.01 22 75.86 25 28.74 109 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0987_1.02 Irx5 NDTGTHNNN 1.04e-5 1.20e-3 8.59e-1 115 28 28 88 1 25 89.29 38 43.18 110 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0942_1.02 Irx4 DTGTHNNN 1.11e-5 1.27e-3 9.14e-1 115 29 29 87 1 27 93.10 43 49.43 111 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1588_1.02 Sox10 ATTGWTNNN 1.11e-5 1.27e-3 9.14e-1 115 29 29 87 1 27 93.10 43 49.43 112 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1593_1.02 Sox18 ATTGTNNN 1.11e-5 1.27e-3 9.14e-1 115 29 29 87 1 27 93.10 43 49.43 113 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1160_1.02 (NP_001076596.1)_(PBM_CONSTRUCTS)_(DBD_1.00) NYAATYANN 1.20e-5 1.38e-3 9.90e-1 115 25 25 91 1 20 80.00 28 30.77 114 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0632_1.02 (Dmrta2)_(Homo_sapiens)_(DBD_1.00) HHWGTWDYNN 1.21e-5 1.39e-3 1.00e0 115 35 35 81 1 32 91.43 41 50.62 115 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1298_1.02 Srf HHWWWWWWDD 1.27e-5 1.46e-3 1.05e0 115 35 35 81 1 29 82.86 32 39.51 116 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1057_1.02 Homez NNHWCGWDNN 1.35e-5 1.55e-3 1.11e0 115 35 35 81 1 27 77.14 27 33.33 117 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0312_1.02 Junb TGACKYMN 1.36e-5 1.56e-3 1.12e0 115 28 28 88 1 26 92.86 43 48.86 118 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1000_1.02 Arx NTAATTRV 1.51e-5 1.74e-3 1.25e0 115 29 29 87 1 21 72.41 23 26.44 119 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1004_1.02 Alx1 HTAATTRV 1.51e-5 1.74e-3 1.25e0 115 29 29 87 1 21 72.41 23 26.44 120 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1301_1.02 Mecp2 NNNNHCAYNN 1.72e-5 1.97e-3 1.42e0 115 29 29 87 1 27 93.10 44 50.57 121 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1600_1.02 Sox7 ATTGTNNN 1.72e-5 1.97e-3 1.42e0 115 29 29 87 1 27 93.10 44 50.57 122 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1580_1.02 Hbp1 HHATWBNN 1.75e-5 2.01e-3 1.44e0 115 29 29 87 1 28 96.55 49 56.32 123 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0290_1.02 Mafk NWWNTGCNNN 1.98e-5 2.27e-3 1.63e0 115 31 31 85 1 29 93.55 45 52.94 124 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0641_1.02 (Dmrta1)_(Drosophila_melanogaster)_(DBD_0.96) WGTWWCNWWW 1.98e-5 2.27e-3 1.63e0 115 31 31 85 1 29 93.55 45 52.94 125 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0920_1.02 Rhox6 NTAATDAV 2.34e-5 2.69e-3 1.93e0 115 26 26 90 1 20 76.92 27 30.00 126 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0435_1.02 Zkscan5 HRKARDTRAN 2.63e-5 3.02e-3 2.17e0 115 29 29 87 1 27 93.10 45 51.72 127 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0969_1.02 Lhx8 NYAATYANN 2.66e-5 3.05e-3 2.19e0 115 29 29 87 1 23 79.31 30 34.48 128 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1043_1.02 Hmx2 WTAAKYGNNN 2.66e-5 3.05e-3 2.19e0 115 29 29 87 1 23 79.31 30 34.48 129 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0977_1.02 Cdx2 NVYMATWAA 2.73e-5 3.13e-3 2.25e0 115 29 29 87 1 22 75.86 27 31.03 130 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1050_1.02 Pbx1 NNHRTCANN 3.02e-5 3.46e-3 2.49e0 115 29 29 87 1 26 89.66 41 47.13 131 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1067_1.02 Cphx NWNBYHATCA 4.00e-5 4.59e-3 3.30e0 115 29 29 87 1 27 93.10 46 52.87 132 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1584_1.02 Sox8 ATTSWYNN 4.00e-5 4.59e-3 3.30e0 115 29 29 87 1 27 93.10 46 52.87 133 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1599_1.02 Sox21 ATTRTNNNN 4.00e-5 4.59e-3 3.30e0 115 29 29 87 1 27 93.10 46 52.87 134 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0945_1.02 Hmbox1 NHWACYHN 5.70e-5 6.53e-3 4.69e0 115 29 29 87 1 24 82.76 35 40.23 135 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6239_1.02 (Foxf2)_(Homo_sapiens)_(DBD_1.00) HWADGTAAACA 5.85e-5 6.70e-3 4.81e0 115 9 9 107 1.01 9 100.00 33 30.84 136 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0213_1.02 Olig3 NWAYCATADKN 5.98e-5 6.85e-3 4.92e0 115 28 28 88 1.01 19 67.86 22 25.00 137 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5344_1.02 (Dlx6)_(Homo_sapiens)_(DBD_1.00) NTAATTRB 6.10e-5 6.99e-3 5.02e0 115 29 29 87 1 18 62.07 18 20.69 138 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0944_1.02 Otx2 NTAATCYN 8.11e-5 9.29e-3 6.67e0 115 29 29 87 1 19 65.52 21 24.14 139 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1158_1.02 (Hoxd12)_(PBM_CONSTRUCTS)_(DBD_1.00) NVYMRTWAAN 8.73e-5 9.98e-3 7.17e0 115 29 29 87 1 24 82.76 36 41.38 140 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1030_1.02 Nkx2-3 NVYACTTVD 8.82e-5 1.01e-2 7.25e0 115 30 30 86 1 27 90.00 44 51.16 141 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6279_1.02 (Hmga1)_(Homo_sapiens)_(DBD_1.00) AAAATWN 9.38e-5 1.07e-2 7.71e0 115 35 35 81 1 29 82.86 36 44.44 142 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0951_1.02 Esx1 NYTAATTA 9.74e-5 1.11e-2 8.00e0 115 29 29 87 1 20 68.97 24 27.59 143 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0999_1.02 Nkx6-1 NWTAATKRN 1.02e-4 1.16e-2 8.36e0 115 29 29 87 1 23 79.31 33 37.93 144 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1641_1.02 Tbp WTAWAWN 1.02e-4 1.17e-2 8.39e0 115 30 30 86 1 25 83.33 37 43.02 145 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1507_1.02 (Lcor)_(Meleagris_gallopavo)_(DBD_1.00) NDWTTNGGNN 1.07e-4 1.22e-2 8.75e0 115 35 35 81 1 27 77.14 31 38.27 146 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0973_1.02 Hnf1a HTAACYNN 1.08e-4 1.23e-2 8.83e0 115 31 31 85 1 20 64.52 21 24.71 147 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0955_1.02 Cdx1 NVYMATWAA 1.09e-4 1.24e-2 8.93e0 115 29 29 87 1 22 75.86 30 34.48 148 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0966_1.02 Nkx2-2 VYACTYNWN 1.20e-4 1.37e-2 9.84e0 115 30 30 86 1 28 93.33 49 56.98 # AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28 # The format of this file is described at http://meme-suite.org/doc/ame-output-format.html. # ame -o AME-CISBP_Mus_musculus-limbDnaseHotspotAllBulkAndSCTSSGoodRed ../limbDnaseHotspotAllBulkAndSCTSSGoodRed.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme