rank	motif_DB	motif_ID	motif_alt_ID	consensus	p-value	adj_p-value	E-value	tests	FASTA_max	pos	neg	PWM_min	TP	%TP	FP	%FP
1	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0942_1.02	Irx4	DTGTHNNN	5.18e-11	4.28e-8	3.07e-5	827	646	646	182	1	371	57.43	55	30.22
2	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0735_1.02	Foxo6	NNVWMAAYAN	7.07e-10	5.85e-7	4.20e-4	827	647	647	181	1	384	59.35	61	33.70
3	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0988_1.02	Irx6	DTGTHNN	1.16e-9	9.56e-7	6.86e-4	827	646	646	182	1	354	54.80	54	29.67
4	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0987_1.02	Irx5	NDTGTHNNN	1.59e-9	1.32e-6	9.47e-4	827	646	646	182	1	345	53.41	52	28.57
5	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1050_1.02	Pbx1	NNHRTCANN	1.64e-9	1.35e-6	9.72e-4	827	644	644	184	1	374	58.07	61	33.15
6	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0304_1.02	Cebpa	RTTDCGHAAY	2.09e-9	1.73e-6	1.24e-3	827	655	655	173	1.01	253	38.63	27	15.61
7	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0130_1.02	Setbp1	NDNWWWWNHN	2.43e-9	2.01e-6	1.44e-3	827	657	657	171	1	341	51.90	46	26.90
8	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0632_1.02	(Dmrta2)_(Homo_sapiens)_(DBD_1.00)	HHWGTWDYNN	3.30e-9	2.73e-6	1.96e-3	827	646	646	182	1	353	54.64	55	30.22
9	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1067_1.02	Cphx	NWNBYHATCA	4.58e-9	3.79e-6	2.72e-3	827	655	655	173	1	378	57.71	57	32.95
10	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1301_1.02	Mecp2	NNNNHCAYNN	4.82e-9	3.98e-6	2.86e-3	827	646	646	182	1	355	54.95	56	30.77
11	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0909_1.02	Irx2	NNDACAHNN	5.88e-9	4.86e-6	3.49e-3	827	646	646	182	1	339	52.48	52	28.57
12	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0734_1.02	Foxc1	WRNRTMAAYA	6.89e-9	5.70e-6	4.09e-3	827	648	648	180	1.01	415	64.04	72	40.00
13	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0274_1.02	Cebpd	RTTRCRHMA	8.82e-9	7.29e-6	5.24e-3	827	655	655	173	1	265	40.46	31	17.92
14	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0723_1.02	Foxg1	NNRWMAAYAN	1.01e-8	8.39e-6	6.02e-3	827	647	647	181	1	390	60.28	66	36.46
15	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0945_1.02	Hmbox1	NHWACYHN	1.04e-8	8.60e-6	6.18e-3	827	646	646	182	1	309	47.83	45	24.73
16	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0313_1.02	Cebpg	NRTTRCRHMA	1.12e-8	9.29e-6	6.67e-3	827	646	646	182	1	250	38.70	31	17.03
17	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1033_1.02	Pou3f3	DWATKMRN	2.25e-8	1.86e-5	1.34e-2	827	646	646	182	1	321	49.69	49	26.92
18	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1046_1.02	Rhox11	NDWWACABSN	2.73e-8	2.26e-5	1.62e-2	827	647	647	181	1	345	53.32	55	30.39
19	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1588_1.02	Sox10	ATTGWTNNN	2.85e-8	2.36e-5	1.69e-2	827	646	646	182	1	365	56.50	61	33.52
20	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0903_1.02	Hoxb6	TWWTNNN	3.55e-8	2.93e-5	2.11e-2	827	646	646	182	1	303	46.90	45	24.73
21	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1062_1.02	Obox3	NTAATCY	3.67e-8	3.03e-5	2.18e-2	827	655	655	173	1	285	43.51	37	21.39
22	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0747_1.02	Foxl1	WNNRTAAAYA	4.45e-8	3.68e-5	2.64e-2	827	644	644	184	1.01	373	57.92	65	35.33
23	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0756_1.02	(ENSMUSG00000090020)_(Strongylocentrotus_purpuratus)_(DBD_0.44)	NNHMACANN	4.70e-8	3.89e-5	2.79e-2	827	646	646	182	1	377	58.36	65	35.71
24	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0721_1.02	Foxj2	RTMAACANN	5.26e-8	4.35e-5	3.12e-2	827	652	652	176	1	386	59.20	64	36.36
25	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0314_1.02	Cebpb	VTKDYGYAAB	5.34e-8	4.42e-5	3.17e-2	827	646	646	182	1.01	229	35.45	28	15.38
26	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0746_1.02	Gm5294	NNTRTAAACAHN	5.55e-8	4.59e-5	3.30e-2	827	644	644	184	1.01	309	47.98	48	26.09
27	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0131_1.02	Ahctf1	AAATAAAT	5.65e-8	4.67e-5	3.35e-2	827	646	646	182	1.01	358	55.42	60	32.97
28	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1045_1.02	Hoxd10	WTWAYNNN	6.14e-8	5.08e-5	3.64e-2	827	646	646	182	1	339	52.48	55	30.22
29	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0978_1.02	Cux1	NYDATCHN	6.23e-8	5.15e-5	3.70e-2	827	655	655	173	1	325	49.62	47	27.17
30	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0904_1.02	Hoxa10	TTWAYKDBN	6.41e-8	5.30e-5	3.81e-2	827	646	646	182	1	304	47.06	46	25.27
31	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1051_1.02	Pou3f2	NTWATBHN	7.81e-8	6.46e-5	4.64e-2	827	646	646	182	1	303	46.90	46	25.27
32	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0917_1.02	Hoxd13	VYHRTAAAH	8.13e-8	6.73e-5	4.83e-2	827	646	646	182	1	330	51.08	53	29.12
33	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0725_1.02	Foxp1	NGTAAACAN	9.41e-8	7.78e-5	5.59e-2	827	652	652	176	1.01	345	52.91	54	30.68
34	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1007_1.02	Hoxa11	TTWAYKDBN	1.08e-7	8.97e-5	6.44e-2	827	646	646	182	1	317	49.07	50	27.47
35	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1018_1.02	Hlx	YHATNNN	1.13e-7	9.32e-5	6.69e-2	827	655	655	173	1	326	49.77	48	27.75
36	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0408_1.02	Zkscan1	DNNYRYRNNH	1.14e-7	9.45e-5	6.78e-2	827	643	643	185	1	284	44.17	43	23.24
37	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0964_1.02	Hoxd8	NTWATNDN	1.16e-7	9.57e-5	6.87e-2	827	646	646	182	1	297	45.98	45	24.73
38	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0348_1.02	Nfil3	NRTTAYVN	1.17e-7	9.64e-5	6.92e-2	827	646	646	182	1	260	40.25	36	19.78
39	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0979_1.02	Pax4	NTAATNNN	1.29e-7	1.06e-4	7.63e-2	827	655	655	173	1	265	40.46	34	19.65
40	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1236_1.02	Pou2f1	HKMATWWNN	1.30e-7	1.07e-4	7.69e-2	827	644	644	184	1	289	44.88	44	23.91
41	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0924_1.02	Pou6f1	NTAATKAGNN	1.33e-7	1.10e-4	7.90e-2	827	655	655	173	1.01	287	43.82	39	22.54
42	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0928_1.02	Alx3	TAATTDN	1.41e-7	1.16e-4	8.36e-2	827	649	649	179	1	289	44.53	42	23.46
43	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0737_1.02	Foxb1	WRWGTAAAYA	1.60e-7	1.33e-4	9.52e-2	827	652	652	176	1.01	350	53.68	56	31.82
44	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1006_1.02	Hoxa13	SYHRTAAAH	1.63e-7	1.34e-4	9.66e-2	827	643	643	185	1	294	45.72	46	24.86
45	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0934_1.02	Hnf1b	NTWACNNN	1.69e-7	1.40e-4	1.00e-1	827	646	646	182	1	287	44.43	43	23.63
46	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1037_1.02	Duxbl	NNNYAATCAN	1.81e-7	1.50e-4	1.08e-1	827	649	649	179	1	304	46.84	46	25.70
47	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0975_1.02	Lhx5	TAATTRVNN	2.32e-7	1.92e-4	1.38e-1	827	655	655	173	1.01	284	43.36	39	22.54
48	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1580_1.02	Hbp1	HHATWBNN	2.62e-7	2.17e-4	1.56e-1	827	657	657	171	1	393	59.82	65	38.01
49	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0732_1.02	Foxc2	WRNRTMAAYA	2.78e-7	2.30e-4	1.65e-1	827	644	644	184	1.01	402	62.42	76	41.30
50	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1041_1.02	Hoxb13	NVYHRTWAAN	2.89e-7	2.39e-4	1.72e-1	827	643	643	185	1	291	45.26	46	24.86
51	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1243_1.02	Pit1	NNTKMATWWD	2.89e-7	2.39e-4	1.72e-1	827	643	643	185	1.01	291	45.26	46	24.86
52	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1014_1.02	Hoxb7	NTWATKDN	3.62e-7	2.99e-4	2.15e-1	827	646	646	182	1	291	45.05	45	24.73
53	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0957_1.02	Msx3	TAATTRNN	3.88e-7	3.21e-4	2.30e-1	827	655	655	173	1	259	39.54	34	19.65
54	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1026_1.02	Hoxd11	TTWAYKRB	4.00e-7	3.31e-4	2.38e-1	827	646	646	182	1	314	48.61	51	28.02
55	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1034_1.02	Dbx2	NHVATNA	4.00e-7	3.31e-4	2.38e-1	827	646	646	182	1	314	48.61	51	28.02
56	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0997_1.02	Vax2	NTAATDRNN	4.07e-7	3.36e-4	2.41e-1	827	644	644	184	1	283	43.94	44	23.91
57	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0784_1.02	Gata5	NNHGATAAN	4.18e-7	3.46e-4	2.48e-1	827	646	646	182	1	306	47.37	49	26.92
58	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0290_1.02	Mafk	NWWDTGCNNN	5.26e-7	4.35e-4	3.12e-1	827	646	646	182	1	379	58.67	69	37.91
59	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1057_1.02	Homez	NNHWCGWDNN	5.71e-7	4.72e-4	3.39e-1	827	655	655	173	1	279	42.60	39	22.54
60	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0914_1.02	Hoxc8	DTWATBDNN	5.79e-7	4.79e-4	3.44e-1	827	646	646	182	1	312	48.30	51	28.02
61	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6121_1.02	Pou5f1	TTTRCATDWNAAARR	5.91e-7	4.89e-4	3.51e-1	827	644	644	184	1.03	273	42.39	42	22.83
62	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0633_1.02	(Dmrt2)_(Homo_sapiens)_(DBD_1.00)	KAATKTATWN	6.26e-7	5.18e-4	3.72e-1	827	647	647	181	1.01	204	31.53	25	13.81
63	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1238_1.02	Pou3f1	NDMATWANN	6.29e-7	5.20e-4	3.73e-1	827	646	646	182	1	288	44.58	45	24.73
64	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1019_1.02	Prrx2	TAATTDN	6.34e-7	5.25e-4	3.77e-1	827	649	649	179	1	285	43.91	43	24.02
65	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0294_1.02	Atf1	NNKDRYRNND	6.86e-7	5.67e-4	4.07e-1	827	644	644	184	1	330	51.24	57	30.98
66	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0921_1.02	Vax1	NTAATDRNN	7.03e-7	5.81e-4	4.17e-1	827	644	644	184	1	284	44.10	45	24.46
67	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0730_1.02	Foxo4	NNRWMAACAN	7.19e-7	5.94e-4	4.27e-1	827	644	644	184	1.01	373	57.92	69	37.50
68	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0436_1.02	Zfp105	TTRTTKDHYN	7.37e-7	6.10e-4	4.38e-1	827	647	647	181	1	397	61.36	74	40.88
69	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1235_1.02	Pou2f2	HTVATTAN	8.03e-7	6.64e-4	4.77e-1	827	655	655	173	1	290	44.27	42	24.28
70	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0953_1.02	Pou4f3	NYTAATDW	8.39e-7	6.94e-4	4.98e-1	827	657	657	171	1	323	49.16	49	28.65
71	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0998_1.02	Lbx2	NTAAYNRR	8.62e-7	7.12e-4	5.12e-1	827	655	655	173	1	281	42.90	40	23.12
72	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0435_1.02	Zkscan5	HRKARDTRAN	8.64e-7	7.15e-4	5.13e-1	827	658	658	170	1	385	58.51	64	37.65
73	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0912_1.02	Hoxc13	NSYHRTAAAH	1.04e-6	8.58e-4	6.16e-1	827	643	643	185	1.01	288	44.79	47	25.41
74	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1015_1.02	Lmx1b	BYAATWH	1.05e-6	8.70e-4	6.25e-1	827	655	655	173	1	338	51.60	54	31.21
75	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1056_1.02	Pou3f4	HTAATKMRNN	1.08e-6	8.91e-4	6.39e-1	827	646	646	182	1	289	44.74	46	25.27
76	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1158_1.02	(Hoxd12)_(PBM_CONSTRUCTS)_(DBD_1.00)	NVYMRTWAAN	1.08e-6	8.91e-4	6.39e-1	827	646	646	182	1	289	44.74	46	25.27
77	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0971_1.02	Pax7	NTAATYNN	1.08e-6	8.93e-4	6.41e-1	827	655	655	173	1	271	41.37	38	21.97
78	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0927_1.02	Phox2b	NNTAATNN	1.22e-6	1.01e-3	7.24e-1	827	655	655	173	1	279	42.60	40	23.12
79	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1009_1.02	Hoxa7	NTWATKRNN	1.22e-6	1.01e-3	7.24e-1	827	655	655	173	1	279	42.60	40	23.12
80	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0985_1.02	Irx3	NNBDTGTHNN	1.26e-6	1.04e-3	7.47e-1	827	646	646	182	1	323	50.00	55	30.22
81	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0963_1.02	Lhx3	NNYTAATTA	1.28e-6	1.06e-3	7.62e-1	827	655	655	173	1.01	270	41.22	38	21.97
82	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1066_1.02	Tlx2	TAWTTAAT	1.31e-6	1.08e-3	7.78e-1	827	654	654	174	1.01	237	36.24	31	17.82
83	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1579_1.02	Tcf7	TTTVHHNNN	1.36e-6	1.12e-3	8.05e-1	827	647	647	181	1	411	63.52	79	43.65
84	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0949_1.02	Hoxc5	NTAATDR	1.49e-6	1.23e-3	8.81e-1	827	646	646	182	1	299	46.28	49	26.92
85	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0999_1.02	Nkx6-1	NWTAATKRN	1.58e-6	1.30e-3	9.37e-1	827	643	643	185	1	266	41.37	42	22.70
86	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1298_1.02	Srf	HHWWWWWWDD	1.70e-6	1.41e-3	1.01e0	827	646	646	182	1	306	47.37	51	28.02
87	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0972_1.02	Uncx	NTAATTDN	1.73e-6	1.43e-3	1.03e0	827	655	655	173	1	255	38.93	35	20.23
88	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1601_1.02	Sox11	WTTGTBNNN	1.76e-6	1.45e-3	1.04e0	827	644	644	184	1	389	60.40	75	40.76
89	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0907_1.02	Meox1	NTAATKRNN	1.77e-6	1.46e-3	1.05e0	827	643	643	185	1	241	37.48	36	19.46
90	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0923_1.02	Phox2a	NNTAATNN	1.81e-6	1.50e-3	1.08e0	827	655	655	173	1	281	42.90	41	23.70
91	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1232_1.02	Pou1f1	NHKMATTAN	1.81e-6	1.50e-3	1.08e0	827	643	643	185	1	281	43.70	46	24.86
92	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1025_1.02	Hoxd1	NNYVATYA	1.84e-6	1.52e-3	1.09e0	827	646	646	182	1	282	43.65	45	24.73
93	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1590_1.02	Sox15	ATTSWNNNN	1.91e-6	1.58e-3	1.14e0	827	646	646	182	1	372	57.59	69	37.91
94	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1039_1.02	Nkx1-2	NNTAATDRN	1.99e-6	1.64e-3	1.18e0	827	655	655	173	1	289	44.12	43	24.86
95	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0105_1.02	Arid3a	NTTTDATHN	2.09e-6	1.73e-3	1.24e0	827	655	655	173	1	338	51.60	55	31.79
96	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1641_1.02	Tbp	WTAWAWN	2.21e-6	1.83e-3	1.31e0	827	646	646	182	1	316	48.92	54	29.67
97	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0958_1.02	Lhx4	BYAATYW	2.22e-6	1.83e-3	1.31e0	827	655	655	173	1	258	39.39	36	20.81
98	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0967_1.02	Shox2	NTAATTRN	2.24e-6	1.85e-3	1.33e0	827	655	655	173	1	249	38.02	34	19.65
99	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0984_1.02	Isx	NNTAATTR	2.28e-6	1.88e-3	1.35e0	827	655	655	173	1	271	41.37	39	22.54
100	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0995_1.02	Gbx2	NTAATYR	2.55e-6	2.11e-3	1.51e0	827	646	646	182	1	292	45.20	48	26.37
101	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1110_1.02	(Hhex)_(Caenorhabditis_elegans)_(DBD_0.77)	NNNYMATNNN	2.64e-6	2.18e-3	1.57e0	827	655	655	173	1	239	36.49	32	18.50
102	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1605_1.02	ENSMUSG00000079994	ATTSWHNNNN	2.64e-6	2.18e-3	1.57e0	827	644	644	184	1	397	61.65	78	42.39
103	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0118_1.02	(Zfp957)_(Arabidopsis_thaliana)_(DBD_0.40)	NNNNDAAWT	2.74e-6	2.26e-3	1.63e0	827	646	646	182	1	341	52.79	61	33.52
104	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0916_1.02	Evx2	NNTAATBR	2.81e-6	2.32e-3	1.66e0	827	644	644	184	1	244	37.89	37	20.11
105	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0943_1.02	Otp	NYTAATTR	2.85e-6	2.36e-3	1.69e0	827	655	655	173	1	274	41.83	40	23.12
106	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0989_1.02	Pou2f3	NNTWATKMR	3.06e-6	2.53e-3	1.82e0	827	646	646	182	1	287	44.43	47	25.82
107	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1054_1.02	Bsx	NTAATBRNN	3.13e-6	2.58e-3	1.85e0	827	655	655	173	1	238	36.34	32	18.50
108	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1020_1.02	Alx4	NTAATTRN	3.15e-6	2.60e-3	1.87e0	827	655	655	173	1	247	37.71	34	19.65
109	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0132_1.02	Hmga2	NNNNRWWWWN	3.23e-6	2.67e-3	1.91e0	827	646	646	182	1	310	47.99	53	29.12
110	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1521_1.02	(Nfatc1)_(Monodelphis_domestica)_(DBD_0.98)	NNTTTCCRNN	3.24e-6	2.68e-3	1.92e0	827	644	644	184	1	416	64.60	84	45.65
111	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0926_1.02	Nanog	NTAATNRNN	3.33e-6	2.75e-3	1.97e0	827	655	655	173	1	260	39.69	37	21.39
112	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0940_1.02	Msx2	NNYAATTA	3.33e-6	2.75e-3	1.97e0	827	655	655	173	1	260	39.69	37	21.39
113	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0993_1.02	Barhl2	NTAAWYGNB	3.37e-6	2.78e-3	2.00e0	827	655	655	173	1	273	41.68	40	23.12
114	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1064_1.02	Gbx1	NNTAATTR	3.42e-6	2.83e-3	2.03e0	827	655	655	173	1	242	36.95	33	19.08
115	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1011_1.02	Hoxa5	NTAATKRNN	3.54e-6	2.93e-3	2.10e0	827	655	655	173	1	277	42.29	41	23.70
116	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0935_1.02	Dlx4	NTAATTRN	4.09e-6	3.37e-3	2.42e0	827	644	644	184	1	278	43.17	46	25.00
117	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0911_1.02	Mnx1	NTAATBRNNN	4.20e-6	3.47e-3	2.49e0	827	644	644	184	1	262	40.68	42	22.83
118	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1058_1.02	En1	NYAATYA	4.25e-6	3.51e-3	2.52e0	827	646	646	182	1	316	48.92	55	30.22
119	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1068_1.02	Obox5	HTAATCYN	4.29e-6	3.54e-3	2.54e0	827	655	655	173	1	297	45.34	46	26.59
120	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1017_1.02	En2	NNYAATYA	4.92e-6	4.06e-3	2.92e0	827	655	655	173	1	275	41.98	41	23.70
121	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1070_1.02	Hoxc4	NTAATKRNN	4.92e-6	4.06e-3	2.92e0	827	655	655	173	1	275	41.98	41	23.70
122	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1531_1.02	Rfx3	CNTRGYDACV	4.98e-6	4.11e-3	2.95e0	827	554	554	274	1.01	147	26.53	36	13.14
123	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1599_1.02	Sox21	ATTRTNNNN	5.15e-6	4.25e-3	3.05e0	827	646	646	182	1	377	58.36	72	39.56
124	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0594_1.02	(Lin54)_(Gallus_gallus)_(DBD_0.98)	DTTTRAATH	5.16e-6	4.26e-3	3.06e0	827	654	654	174	1.01	229	35.02	31	17.82
125	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0920_1.02	Rhox6	NTAATDAV	5.46e-6	4.51e-3	3.24e0	827	655	655	173	1	257	39.24	37	21.39
126	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0976_1.02	Pdx1	NTAATBDN	5.96e-6	4.92e-3	3.53e0	827	646	646	182	1	287	44.43	48	26.37
127	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1044_1.02	Hoxc12	NVYMRTWAAN	5.98e-6	4.93e-3	3.54e0	827	643	643	185	1	278	43.23	47	25.41
128	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1163_1.02	(Nkx6-3)_(PBM_CONSTRUCTS)_(DBD_1.00)	NWTAATKRN	5.98e-6	4.93e-3	3.54e0	827	643	643	185	1	278	43.23	47	25.41
129	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0981_1.02	Dlx5	TAATTRN	6.03e-6	4.97e-3	3.57e0	827	646	646	182	1	283	43.81	47	25.82
130	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0959_1.02	Prrx1	TAATTRRN	6.10e-6	5.03e-3	3.61e0	827	655	655	173	1	234	35.73	32	18.50
131	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1598_1.02	Tcf7l1	NTTTSWWN	6.52e-6	5.38e-3	3.86e0	827	647	647	181	1	416	64.30	83	45.86
132	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0905_1.02	Hoxa4	NTAATKRNN	6.81e-6	5.62e-3	4.03e0	827	655	655	173	1	273	41.68	41	23.70
133	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0961_1.02	Barhl1	NTAAWYGNN	6.94e-6	5.72e-3	4.11e0	827	644	644	184	1	251	38.98	40	21.74
134	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0913_1.02	Hoxc11	DTTWAYKRBN	7.22e-6	5.96e-3	4.28e0	827	646	646	182	1	270	41.80	44	24.18
135	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0937_1.02	Six6	HKATMYN	7.36e-6	6.07e-3	4.36e0	827	649	649	179	1	202	31.12	27	15.08
136	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0293_1.02	Tef	NRTTAYRYVA	7.65e-6	6.31e-3	4.53e0	827	627	627	201	1	177	28.23	27	13.43
137	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1065_1.02	Noto	NNTAATTANN	7.69e-6	6.34e-3	4.55e0	827	655	655	173	1	285	43.51	44	25.43
138	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1032_1.02	Prop1	NYAATTA	7.80e-6	6.43e-3	4.61e0	827	655	655	173	1	322	49.16	53	30.64
139	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0213_1.02	Olig3	NWAYCATADKN	7.93e-6	6.54e-3	4.70e0	827	657	657	171	1.01	249	37.90	35	20.47
140	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1055_1.02	Hoxb8	NTWATKRNN	8.40e-6	6.92e-3	4.97e0	827	646	646	182	1	281	43.50	47	25.82
141	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1593_1.02	Sox18	ATTGTNNN	8.46e-6	6.97e-3	5.00e0	827	646	646	182	1	367	56.81	70	38.46
142	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0133_1.02	Phf21a	NNWATATWAATT	8.94e-6	7.37e-3	5.29e0	827	655	655	173	1.01	267	40.76	40	23.12
143	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0107_1.02	Arid5b	NNRTATTN	9.12e-6	7.51e-3	5.39e0	827	655	655	173	1	245	37.40	35	20.23
144	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1027_1.02	Hoxa6	WTAATKRBN	9.80e-6	8.07e-3	5.79e0	827	655	655	173	1	275	41.98	42	24.28
145	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1013_1.02	Hoxb5	NTAATBDNN	1.09e-5	9.00e-3	6.46e0	827	646	646	182	1	295	45.67	51	28.02
146	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0990_1.02	Barx2	NTAATBRNN	1.10e-5	9.05e-3	6.50e0	827	655	655	173	1	270	41.22	41	23.70
147	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0437_1.02	Zfp637	TATRTATRT	1.17e-5	9.61e-3	6.90e0	827	655	655	173	1.01	261	39.85	39	22.54
148	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1262_1.02	Irf9	WNYGAAACH	1.18e-5	9.70e-3	6.96e0	827	646	646	182	1	347	53.72	65	35.71
149	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1584_1.02	Sox8	ATTSWYNN	1.20e-5	9.87e-3	7.09e0	827	646	646	182	1	372	57.59	72	39.56
150	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0931_1.02	Lhx1	TAATTRNNN	1.40e-5	1.15e-2	8.26e0	827	649	649	179	1	287	44.22	48	26.82
151	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0992_1.02	Vsx1	NNTAATTRN	1.50e-5	1.24e-2	8.87e0	827	655	655	173	1	268	40.92	41	23.70
152	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0918_1.02	Evx1	NTAATBRNN	1.54e-5	1.26e-2	9.07e0	827	644	644	184	1	234	36.34	37	20.11
153	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0960_1.02	Lmx1a	NYAATHWN	1.54e-5	1.26e-2	9.08e0	827	646	646	182	1	289	44.74	50	27.47
154	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0317_1.02	Dbp	NVTTAYRYAA	1.56e-5	1.28e-2	9.18e0	827	643	643	185	1.01	216	33.59	33	17.84
155	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0641_1.02	(Dmrta1)_(Drosophila_melanogaster)_(DBD_0.96)	WGTWWCNWWW	1.56e-5	1.28e-2	9.21e0	827	647	647	181	1	351	54.25	66	36.46
156	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0630_1.02	(Dmrt1)_(Homo_sapiens)_(DBD_0.98)	WWTGTWDCNW	1.64e-5	1.35e-2	9.69e0	827	643	643	185	1.01	306	47.59	56	30.27
157	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0973_1.02	Hnf1a	HTAACYNN	1.65e-5	1.36e-2	9.74e0	827	625	625	203	1	227	36.32	42	20.69

# AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28
# The format of this file is described at http://meme-suite.org/doc/ame-output-format.html.
# ame -o AME-CISBP_Mus_musculus-limbDnaseHotspotAllBulkAndSCTSSGoodDarkRed ../limbDnaseHotspotAllBulkAndSCTSSGoodDarkRed.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme