rank motif_DB motif_ID motif_alt_ID consensus p-value adj_p-value E-value tests FASTA_max pos neg PWM_min TP %TP FP %FP 1 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M4453_1.02 (Bcl11a)_(Homo_sapiens)_(DBD_1.00) ADGRGGAASTGAAAV 7.38e-15 1.29e-10 9.25e-8 17474 323 323 27089 4.93 118 36.53 4918 18.15 2 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6122_1.02 Sfpi1 ARAAAGAGGAAGTGR 1.22e-14 2.61e-10 1.87e-7 21335 323 323 27089 9.83 112 34.67 4567 16.86 3 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6485_1.02 (Spib)_(Homo_sapiens)_(DBD_0.99) ARAAASMGGAAS 6.96e-13 1.12e-8 8.02e-6 16062 323 323 27089 22.9 36 11.15 702 2.59 4 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2276_1.02 Erg RCAGGAAGTRR 9.48e-12 1.83e-7 1.31e-4 19308 323 323 27089 7.25 76 23.53 2797 10.33 5 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1922_1.02 Ets1 VRVRCAGGAAGTGGN 1.86e-10 3.30e-6 2.37e-3 17716 323 323 27089 5.34 91 28.17 3911 14.44 6 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0708_1.02 Elf2 DNSCGGAARY 7.66e-9 1.21e-4 8.69e-2 15799 323 323 27089 1.18 178 55.11 10636 39.26 7 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0704_1.02 Elf5 WNVMGGAARY 1.15e-8 2.33e-4 1.67e-1 20337 323 323 27089 2.6 34 10.53 920 3.40 8 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0705_1.02 Etv6 NNVMGGAARY 1.51e-8 2.82e-4 2.02e-1 18717 323 323 27089 1.46 152 47.06 8666 31.99 9 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1443_1.02 Hnf4a NNTGRMCYYN 7.65e-8 1.00e-3 7.21e-1 13143 323 323 27089 1.02 186 57.59 11592 42.79 10 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0190_1.02 Srebf2 TCRCGTGA 3.74e-7 1.09e-3 7.86e-1 2930 323 323 27089 7.33 18 5.57 345 1.27 11 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0696_1.02 Ehf WNVMGGAART 9.58e-8 1.64e-3 1.18e0 17166 323 323 27089 1.93 108 33.44 5622 20.75 12 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0220_1.02 Arntl NGTCACGTGH 5.48e-7 1.85e-3 1.33e0 3376 323 323 27089 7.22 20 6.19 434 1.60 13 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0193_1.02 Tcfeb GTCACGTG 6.08e-7 2.64e-3 1.90e0 4355 323 323 27089 4.77 20 6.19 437 1.61 14 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0201_1.02 Tcfec NNCACGTGNN 6.81e-7 2.70e-3 1.94e0 3979 323 323 27089 1.85 24 7.43 613 2.26 15 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M4680_1.02 (Bach2)_(Homo_sapiens)_(DBD_0.72) GTCACGTG 1.76e-6 9.45e-3 6.79e0 5389 323 323 27089 1.11 94 29.10 4956 18.30 16 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0197_1.02 Usf1 NRTCACGTGVN 2.71e-6 1.14e-2 8.16e0 4221 323 323 27089 7.75 15 4.64 281 1.04 17 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0174_1.02 Tcfe3 NRTCACGHGN 2.68e-6 1.26e-2 9.06e0 4745 323 323 27089 3.76 9 2.79 90 0.33 18 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6221_1.02 (Ets2)_(Homo_sapiens)_(DBD_1.00) VMVGGAAGTKS 6.10e-7 1.34e-2 9.66e0 22201 323 323 27089 2.08 136 42.11 7906 29.19 19 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6137_1.02 Rela DGGAATTTCCM 1.49e-6 1.39e-2 9.99e0 9421 323 323 27089 1.82 95 29.41 5007 18.48 # AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28 # The format of this file is described at http://meme-suite.org/doc/ame-output-format.html. # ame --control ../mm10-refFlat-2014-10-26.TSS-500bp.fa -o AME-CISBP_Mus_musculus-mm10-refFlat-2014-10-26.TSS-500bp.Yellowgenes_Loose ../mm10-refFlat-2014-10-26.TSS-500bp.Yellowgenes_Loose.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme