rank	motif_DB	motif_ID	motif_alt_ID	consensus	p-value	adj_p-value	E-value	tests	FASTA_max	pos	neg	PWM_min	TP	%TP	FP	%FP
1	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2317_1.02	Tcf12	RACAGCTGSNV	9.56e-12	1.13e-7	8.08e-5	11773	114	114	27089	2.16	64	56.14	7028	25.94
2	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2300_1.02	Myog	RRCAGCTGSNV	2.87e-11	3.52e-7	2.53e-4	12279	114	114	27089	2.24	65	57.02	7395	27.30
3	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2299_1.02	Myod1	NRNRRCAGCTGSN	8.11e-11	1.06e-6	7.60e-4	13060	114	114	27089	1.02	88	77.19	12838	47.39
4	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0178_1.02	Ascl2	NVCAGCTGBN	7.96e-11	1.33e-6	9.55e-4	16721	114	114	27089	1.88	52	45.61	5113	18.87
5	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0176_1.02	Tcfap4	MCAKMTGDY	2.49e-10	3.41e-6	2.45e-3	13703	114	114	27089	1.01	89	78.07	13327	49.20
6	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0203_1.02	Figla	VCASSTGNN	3.31e-9	4.73e-5	3.40e-2	14315	114	114	27089	2.53	20	17.54	944	3.48
7	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4971_1.02	(Ferd3l)_(Drosophila_melanogaster)_(DBD_0.89)	GTVACAGVTG	1.94e-8	2.09e-4	1.50e-1	10777	114	114	27089	1.66	52	45.61	5946	21.95
8	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0219_1.02	Tcf4	VCAGGTGBN	1.52e-8	2.55e-4	1.83e-1	16755	114	114	27089	1.49	56	49.12	6669	24.62
9	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0216_1.02	Nhlh2	NGCAGCTGYN	1.94e-8	2.71e-4	1.94e-1	13945	114	114	27089	1.83	52	45.61	5946	21.95
10	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2318_1.02	Tcf3	SMCAGCTGCHB	2.14e-8	2.97e-4	2.13e-1	13848	114	114	27089	1.06	85	74.56	13243	48.89
11	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6358_1.02	(Neurod1)_(Homo_sapiens)_(DBD_1.00)	SGGCAGRTGKSC	1.21e-7	1.36e-3	9.79e-1	11229	114	114	27089	1.11	70	61.40	10032	37.03
12	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5571_1.02	(Id4)_(Homo_sapiens)_(DBD_1.00)	DVCAGGTGYN	4.68e-7	4.79e-3	3.44e0	10271	114	114	27089	1.04	68	59.65	9891	36.51
13	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0209_1.02	Myf6	NCANCTGWY	3.35e-7	5.27e-3	3.78e0	15753	114	114	27089	1.49	32	28.07	2935	10.83
14	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6432_1.02	(Ppard)_(Homo_sapiens)_(DBD_0.97)	TGACCTTTVNCCTR	8.01e-7	8.46e-3	6.07e0	10611	114	114	27089	4.31	23	20.18	1722	6.36
15	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5627_1.02	(Mesp2)_(Homo_sapiens)_(DBD_0.98)	NVCAGGTGYD	8.57e-7	1.09e-2	7.85e0	12843	114	114	27089	3.29	18	15.79	1093	4.03

# AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28
# The format of this file is described at http://meme-suite.org/doc/ame-output-format.html.
# ame --control ../mm10-refFlat-2014-10-26.TSS-500bp.fa -o AME-CISBP_Mus_musculus-mm10-refFlat-2014-10-26.TSS-500bp.DarkRedGenes ../mm10-refFlat-2014-10-26.TSS-500bp.DarkRedGenes.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme