rank motif_DB motif_ID motif_alt_ID consensus p-value adj_p-value E-value tests FASTA_max pos neg PWM_min TP %TP FP %FP 1 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0404_1.02 Zfp202 NNNKGGGGSV 5.68e-13 8.13e-9 5.84e-6 14306 113 113 27089 1.1 84 74.34 11059 40.82 2 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6552_1.02 (Zfp148)_(Homo_sapiens)_(DBD_1.00) KGVGKGGGGGAGGGG 6.58e-13 1.21e-8 8.68e-6 18366 113 113 27089 1.25 105 92.92 17298 63.86 3 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0406_1.02 Zbtb7b NNRGGGGKCN 2.25e-12 2.59e-8 1.86e-5 11523 113 113 27089 1.01 84 74.34 11300 41.71 4 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0394_1.02 Plagl1 NDGGGGCCMN 6.01e-12 7.85e-8 5.63e-5 13052 113 113 27089 1.16 73 64.60 8908 32.88 5 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0429_1.02 Zfp740 NDKGGGGGGG 6.87e-11 8.25e-7 5.92e-4 12012 113 113 27089 1.56 64 56.64 7417 27.38 6 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M4640_1.02 (Zbtb7a)_(Homo_sapiens)_(DBD_1.00) GGGSRRGGGKCBSBG 1.46e-10 2.07e-6 1.49e-3 14188 113 113 27089 1.94 70 61.95 8802 32.49 7 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0417_1.02 Egr1 NGMGKGGGYG 2.63e-10 3.95e-6 2.84e-3 15003 113 113 27089 1.16 82 72.57 11698 43.18 8 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1552_1.02 Sp110 NNNAGGGVN 2.19e-10 4.11e-6 2.95e-3 18807 113 113 27089 1.23 78 69.03 10691 39.47 9 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6482_1.02 (Sp3)_(Homo_sapiens)_(DBD_0.97) VGVVGGGGGCGGGGCBRGSS 5.12e-10 9.71e-6 6.97e-3 18960 113 113 27089 1.3 103 91.15 17914 66.13 10 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6336_1.02 (Maz)_(Homo_sapiens)_(DBD_0.98) RGGGDRGGGAGGGRGGG 1.18e-9 2.36e-5 1.70e-2 20094 113 113 27089 1.49 103 91.15 18093 66.79 11 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6123_1.02 Zfp281 GRGKTGGGGGAGGGG 4.45e-9 7.64e-5 5.49e-2 17176 113 113 27089 1.34 95 84.07 15825 58.42 12 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2391_1.02 (Klf5)_(Homo_sapiens)_(DBD_0.95) DGGGHGGGGC 4.91e-9 9.47e-5 6.80e-2 19275 113 113 27089 1.22 102 90.27 18064 66.68 13 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2314_1.02 (Sp2)_(Homo_sapiens)_(DBD_1.00) SSSVRGRGGCGGGRC 1.20e-8 2.23e-4 1.60e-1 18518 113 113 27089 1.65 95 84.07 16052 59.26 14 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0421_1.02 Klf8 NGGGYGKGKN 1.62e-8 2.83e-4 2.03e-1 17509 113 113 27089 1.23 79 69.91 11821 43.64 15 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0422_1.02 Zic5 SYRGGGGGTM 3.35e-8 3.67e-4 2.63e-1 10960 113 113 27089 1.02 72 63.72 10317 38.09 16 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6325_1.02 (Klf6)_(Homo_sapiens)_(DBD_1.00) GGGGGCKG 3.45e-8 5.57e-4 4.00e-1 16171 113 113 27089 1.56 76 67.26 11263 41.58 17 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6535_1.02 (Wt1)_(Homo_sapiens)_(DBD_0.99) GMGGGGGCGKGGG 3.28e-8 5.63e-4 4.04e-1 17163 113 113 27089 1.29 93 82.30 15701 57.96 18 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0393_1.02 Glis2 NHGRGGGGTCN 1.16e-7 8.22e-4 5.90e-1 7117 113 113 27089 1.04 54 47.79 6721 24.81 19 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6420_1.02 (Plag1)_(Homo_sapiens)_(DBD_0.96) GGRGGSMHNWVKAGGGG 6.15e-8 8.45e-4 6.07e-1 13737 113 113 27089 1.04 84 74.34 13391 49.43 20 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M4599_1.02 (E2f6)_(Homo_sapiens)_(DBD_0.98) NRGGCGGGARR 1.16e-7 1.83e-3 1.32e0 15823 113 113 27089 1.65 73 64.60 10828 39.97 21 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6321_1.02 (Klf15)_(Homo_sapiens)_(DBD_1.00) RSMKGGGAGDKGGGGSS 2.68e-7 4.19e-3 3.01e0 15645 113 113 27089 1.17 87 76.99 14545 53.69 22 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0414_1.02 Egr3 RCGTGGGCGD 3.94e-7 5.16e-3 3.70e0 13114 113 113 27089 1.61 39 34.51 4147 15.31 23 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0439_1.02 Zic2 CNCNGBRGGN 5.66e-7 6.35e-3 4.56e0 11254 113 113 27089 1.01 72 63.72 10969 40.49 24 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2271_1.02 E2f3 SDSYGVGGGCGGGAR 6.40e-7 8.21e-3 5.89e0 12881 113 113 27089 1.83 63 55.75 8959 33.07 # AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28 # The format of this file is described at http://meme-suite.org/doc/ame-output-format.html. # ame --control ../mm10-refFlat-2014-10-26.TSS-500bp.fa -o AME-CISBP_Mus_musculus-mm10-refFlat-2014-10-26.TSS-500bp.Cyangenes_Loose ../mm10-refFlat-2014-10-26.TSS-500bp.Cyangenes_Loose.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme