rank	motif_DB	motif_ID	motif_alt_ID	consensus	p-value	adj_p-value	E-value	tests	FASTA_max	pos	neg	PWM_min	TP	%TP	FP	%FP
1	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1552_1.02	Sp110	NNNAGGGVN	4.86e-20	3.09e-15	2.22e-12	63506	499	499	96928	1.22	335	67.13	45342	46.78
2	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2391_1.02	(Klf5)_(Homo_sapiens)_(DBD_0.95)	DGGGHGGGGC	1.50e-18	9.70e-14	6.97e-11	64625	499	499	96928	2.14	351	70.34	49431	51.00
3	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2274_1.02	Egr2	GKGYGTGGGYGKRDS	3.06e-17	1.62e-12	1.16e-9	52908	499	499	96928	1.28	337	67.54	47339	48.84
4	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6552_1.02	(Zfp148)_(Homo_sapiens)_(DBD_1.00)	KGVGKGGGGGAGGGG	8.54e-17	5.39e-12	3.87e-9	63122	499	499	96928	3.1	328	65.73	45800	47.25
5	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1871_1.02	Klf4	DGGGYGKGGC	2.94e-16	1.62e-11	1.16e-8	55101	499	499	96928	1.18	351	70.34	50800	52.41
6	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0417_1.02	Egr1	NGMGKGGGYG	8.90e-16	4.72e-11	3.39e-8	52999	499	499	96928	1.01	356	71.34	52140	53.79
7	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0404_1.02	Zfp202	NNNKGGGGSV	9.35e-16	5.10e-11	3.66e-8	54509	499	499	96928	1.12	323	64.73	45441	46.88
8	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6535_1.02	(Wt1)_(Homo_sapiens)_(DBD_0.99)	GMGGGGGCGKGGG	8.80e-16	5.11e-11	3.67e-8	58105	499	499	96928	3.17	281	56.31	37351	38.53
9	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4599_1.02	(E2f6)_(Homo_sapiens)_(DBD_0.98)	NRGGCGGGARR	5.38e-15	2.87e-10	2.06e-7	53446	499	499	96928	2.2	231	46.29	28791	29.70
10	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6482_1.02	(Sp3)_(Homo_sapiens)_(DBD_0.97)	VGVVGGGGGCGGGGCBRGSS	8.58e-15	5.41e-10	3.88e-7	63035	499	499	96928	5.37	292	58.52	40025	41.29
11	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6325_1.02	(Klf6)_(Homo_sapiens)_(DBD_1.00)	GGGGGCKG	1.08e-14	5.99e-10	4.30e-7	55339	499	499	96928	1.03	362	72.55	54097	55.81
12	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6127_1.02	Klf2	DGGGYGKGGYB	2.17e-14	1.23e-9	8.85e-7	56725	499	499	96928	1.35	335	67.13	48719	50.26
13	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4640_1.02	(Zbtb7a)_(Homo_sapiens)_(DBD_1.00)	GGGSRRGGGKCBSBG	3.61e-14	1.81e-9	1.30e-6	50112	499	499	96928	1.84	269	53.91	36105	37.25
14	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6146_1.02	(Tcfap2d)_(Homo_sapiens)_(DBD_1.00)	ACGSGCCBCRGGCS	3.06e-13	8.10e-9	5.82e-6	26435	499	499	96928	266	8	1.60	16	0.02
15	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0414_1.02	Egr3	RCGTGGGYGD	2.66e-13	1.28e-8	9.22e-6	48249	499	499	96928	1.04	318	63.73	46047	47.51
16	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6201_1.02	(Egr4)_(Homo_sapiens)_(DBD_1.00)	GGSGGYRGGGM	3.20e-13	1.55e-8	1.11e-5	48517	499	499	96928	4.49	199	39.88	24303	25.07
17	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6123_1.02	Zfp281	GRGKTGGGGGAGGGG	2.91e-13	1.74e-8	1.25e-5	59711	499	499	96928	2.19	329	65.93	48267	49.80
18	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0421_1.02	Klf8	NGGGYGKGKN	4.20e-13	2.49e-8	1.79e-5	59269	499	499	96928	1.1	352	70.54	53077	54.76
19	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2271_1.02	E2f3	SDSYGVGGGCGGGAR	9.78e-13	4.25e-8	3.05e-5	43493	499	499	96928	1.02	300	60.12	42912	44.27
20	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0405_1.02	Klf7	DGGGCGKGGY	1.15e-12	6.09e-8	4.37e-5	52860	499	499	96928	1.01	346	69.34	52144	53.80
21	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6336_1.02	(Maz)_(Homo_sapiens)_(DBD_0.98)	RGGGDRGGGAGGGRGGG	1.87e-12	1.30e-7	9.32e-5	69504	499	499	96928	5.3	290	58.12	41182	42.49
22	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0422_1.02	Zic5	SYRGGGGGTM	3.64e-12	1.69e-7	1.21e-4	46368	499	499	96928	1.26	236	47.29	31381	32.38
23	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6323_1.02	(Klf3)_(Homo_sapiens)_(DBD_1.00)	HRCYWGGGTGKGGCT	1.06e-11	3.55e-7	2.55e-4	33516	499	499	96928	1.04	241	48.30	32588	33.62
24	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2314_1.02	(Sp2)_(Homo_sapiens)_(DBD_1.00)	SSSVRGRGGCGGGRC	7.78e-12	4.72e-7	3.39e-4	60633	499	499	96928	1.11	375	75.15	58846	60.71
25	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6267_1.02	(Glis3)_(Homo_sapiens)_(DBD_0.98)	GYGGGGGGTM	1.75e-11	5.99e-7	4.30e-4	34242	499	499	96928	1.01	246	49.30	33643	34.71
26	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0394_1.02	Plagl1	NDGGGGCCMN	1.65e-11	8.39e-7	6.02e-4	50982	499	499	96928	1.11	301	60.32	43979	45.37
27	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0082_1.02	Tcfap2a	HGCCBBVGGS	3.79e-11	1.88e-6	1.35e-3	49667	499	499	96928	1.19	285	57.11	41161	42.47
28	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0439_1.02	Zic2	CNCNGBRGGN	9.18e-11	4.31e-6	3.10e-3	47016	499	499	96928	1.02	300	60.12	44343	45.75
29	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0083_1.02	Tcfap2b	TNSCCYSAGG	1.14e-10	5.11e-6	3.67e-3	44969	499	499	96928	2.49	100	20.04	10016	10.33
30	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6212_1.02	(Hif3a)_(Homo_sapiens)_(DBD_0.74)	CMCACGYAYDCAC	2.33e-10	8.19e-6	5.88e-3	35160	499	499	96928	1.02	247	49.50	34626	35.72
31	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1922_1.02	Ets1	VRVRCAGGAAGTGGN	2.48e-10	1.54e-5	1.11e-2	62263	499	499	96928	2.8	209	41.88	27819	28.70
32	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6553_1.02	(Zfp219)_(Homo_sapiens)_(DBD_1.00)	GDGGGGGGYGGA	3.29e-10	1.63e-5	1.17e-2	49370	499	499	96928	1.86	247	49.50	34737	35.84
33	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0085_1.02	Tcfap2e	THGCCYSVGG	3.64e-10	1.70e-5	1.22e-2	46767	499	499	96928	2.19	95	19.04	9510	9.81
34	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5593_1.02	(Klf16)_(Homo_sapiens)_(DBD_0.92)	GGGGGCGTGKC	3.15e-10	1.72e-5	1.24e-2	54586	499	499	96928	1.28	323	64.73	49304	50.87
35	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6321_1.02	(Klf15)_(Homo_sapiens)_(DBD_1.00)	RSMKGGGAGDKGGGGSS	3.49e-10	1.93e-5	1.38e-2	55175	499	499	96928	3.42	227	45.49	31121	32.11
36	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0084_1.02	Tcfap2c	HSCCBSAGGS	5.31e-10	2.56e-5	1.84e-2	48252	499	499	96928	1.15	286	57.31	42227	43.57
37	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2276_1.02	Erg	RCAGGAAGTRR	4.76e-10	3.28e-5	2.36e-2	68898	499	499	96928	2.12	291	58.32	43153	44.52
38	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0448_1.02	(Ovol2)_(Caenorhabditis_elegans)_(DBD_0.70)	VTAACGGD	7.97e-9	4.21e-5	3.02e-2	5283	499	499	96928	1.98	39	7.82	2633	2.72
39	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0812_1.02	Gcm1	NATRCGGGY	1.31e-9	4.33e-5	3.11e-2	32965	499	499	96928	1.06	195	39.08	25874	26.69
40	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0429_1.02	Zfp740	NDKGGGGGGG	1.19e-9	5.55e-5	3.98e-2	46563	499	499	96928	1.45	238	47.70	33508	34.57
41	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0699_1.02	Fli1	NRCCGGAARY	1.30e-9	5.74e-5	4.12e-2	44231	499	499	96928	1.18	209	41.88	28324	29.22
42	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5856_1.02	(Sp8)_(Homo_sapiens)_(DBD_1.00)	RGKGGGCGTGGY	1.76e-9	9.51e-5	6.83e-2	53899	499	499	96928	1.02	340	68.14	53354	55.04
43	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0406_1.02	Zbtb7b	NNRGGGGKCN	3.44e-9	1.63e-4	1.17e-1	47439	499	499	96928	1.49	162	32.46	20529	21.18
44	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0412_1.02	Zic1	CNCMRCRGGN	4.56e-9	2.15e-4	1.54e-1	47077	499	499	96928	1	304	60.92	46489	47.96
45	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6270_1.02	(Nhlh1)_(Homo_sapiens)_(DBD_1.00)	RRGGMCGCAGCTGMKMCCCV	1.16e-8	2.20e-4	1.58e-1	19009	499	499	96928	720	6	1.20	25	0.03
46	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6456_1.02	(Rreb1)_(Homo_sapiens)_(DBD_0.99)	DKGKKKGKGGKTGKTTKGGGKT	4.58e-9	2.20e-4	1.58e-1	48074	499	499	96928	3.33	225	45.09	31594	32.60
47	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0443_1.02	Klf12	DGGGYGKGKY	9.08e-9	4.68e-4	3.36e-1	51551	499	499	96928	1.53	235	47.09	33649	34.72
48	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2294_1.02	Klf1	WGGGTGTGGYH	1.06e-8	5.01e-4	3.60e-1	47319	499	499	96928	1.01	305	61.12	47000	48.49
49	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0441_1.02	Zic3	CNCHGSRGGN	1.49e-8	7.01e-4	5.04e-1	46960	499	499	96928	1	302	60.52	46541	48.02
50	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6337_1.02	(Mbd2)_(Homo_sapiens)_(DBD_0.99)	SSGKCCGGMGR	3.03e-8	8.59e-4	6.16e-1	28358	499	499	96928	1.76	152	30.46	19487	20.10
51	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6221_1.02	(Ets2)_(Homo_sapiens)_(DBD_1.00)	VMVGGAAGTKS	1.22e-8	9.17e-4	6.58e-1	75017	499	499	96928	1.25	369	73.95	60104	62.01
52	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0696_1.02	Ehf	WNVMGGAART	2.03e-8	1.25e-3	8.99e-1	61731	499	499	96928	3.11	56	11.22	4817	4.97
53	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1963_1.02	Zfx	SSSGSCBVGGCCTS	3.39e-8	1.41e-3	1.01e0	41485	499	499	96928	34.6	8	1.60	86	0.09
54	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0392_1.02	Sp1	GGGGGCGKG	4.17e-8	1.80e-3	1.29e0	43164	499	499	96928	2.46	203	40.68	28401	29.30
55	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6540_1.02	(Zbtb4)_(Homo_sapiens)_(DBD_0.96)	CAATRGYGDTKGYGR	4.09e-7	6.71e-3	4.82e0	16469	499	499	96928	1.28	103	20.64	12258	12.65
56	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5209_1.02	(Sp5)_(Drosophila_melanogaster)_(DBD_0.93)	GKGGGCGKRKC	1.92e-7	8.24e-3	5.92e0	43094	499	499	96928	1.03	274	54.91	42118	43.45
57	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5970_1.02	(Zfp282)_(Homo_sapiens)_(DBD_0.98)	VTCGTGTTRKGGGAAAG	1.28e-6	1.10e-2	7.90e0	8668	499	499	96928	34.2	12	2.40	384	0.40

# AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28
# The format of this file is described at http://meme-suite.org/doc/ame-output-format.html.
# ame --control ../gencode.vM4.annotation.TSS-500bp.fa -o AME-CISBP_Mus_musculus-gencode.vM4.annotation.TSS-500bp.Purplegenes_Loose ../gencode.vM4.annotation.TSS-500bp.Purplegenes_Loose.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme