rank motif_DB motif_ID motif_alt_ID consensus p-value adj_p-value E-value tests FASTA_max pos neg PWM_min TP %TP FP %FP 1 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2283_1.02 (Foxp4)_(Homo_sapiens)_(DBD_0.87) MWWADGTAAACAAAR 7.61e-11 2.87e-8 2.06e-5 377 29 29 1015 13 14 48.28 49 4.83 2 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6535_1.02 (Wt1)_(Homo_sapiens)_(DBD_0.99) GMGGGGGCGKGGG 2.72e-10 1.71e-7 1.23e-4 627 29 29 1015 8.77 12 41.38 33 3.25 3 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0436_1.02 Zfp105 TTRTTKDHYN 1.74e-8 1.06e-5 7.64e-3 612 29 29 1015 2.76 19 65.52 173 17.04 4 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2391_1.02 (Klf5)_(Homo_sapiens)_(DBD_0.95) DGGGHGGGGC 2.80e-8 1.81e-5 1.30e-2 647 29 29 1015 5.46 11 37.93 41 4.04 5 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0133_1.02 Phf21a NNWATATWAATT 1.50e-7 5.19e-5 3.73e-2 346 29 29 1015 1.93 19 65.52 198 19.51 6 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2314_1.02 (Sp2)_(Homo_sapiens)_(DBD_1.00) SSSVRGRGGCGGGRC 9.63e-8 6.02e-5 4.32e-2 625 29 29 1015 6.74 15 51.72 108 10.64 7 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6482_1.02 (Sp3)_(Homo_sapiens)_(DBD_0.97) VGVVGGGGGCGGGGCBRGSS 1.31e-7 8.39e-5 6.02e-2 641 29 29 1015 15.3 12 41.38 62 6.11 8 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6552_1.02 (Zfp148)_(Homo_sapiens)_(DBD_1.00) KGVGKGGGGGAGGGG 3.80e-7 2.33e-4 1.67e-1 612 29 29 1015 6.43 19 65.52 210 20.69 9 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1882_1.02 (Irf1)_(Homo_sapiens)_(DBD_1.00) RAAVNGAAAGTGAAASYRRRN 7.48e-7 2.50e-4 1.79e-1 334 29 29 1015 2.97 18 62.07 194 19.11 10 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6237_1.02 (Foxd3)_(Homo_sapiens)_(DBD_1.00) AAACAAACA 7.34e-7 3.11e-4 2.23e-1 424 29 29 1015 5.2 14 48.28 108 10.64 11 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0421_1.02 Klf8 NGGGYGKGKN 4.93e-7 3.11e-4 2.24e-1 632 29 29 1015 1.55 8 27.59 22 2.17 12 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6123_1.02 Zfp281 GRGKKGGGGGAGGGG 7.34e-7 3.53e-4 2.53e-1 481 29 29 1015 10.4 14 48.28 108 10.64 13 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6456_1.02 (Rreb1)_(Homo_sapiens)_(DBD_0.99) DKGKKKGKGGKTGKTTKGGGKT 1.38e-6 3.66e-4 2.63e-1 266 29 29 1015 1.31 19 65.52 228 22.46 14 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6241_1.02 (Foxn3)_(Homo_sapiens)_(DBD_0.45) WAAAYAAACA 1.23e-6 3.99e-4 2.87e-1 324 29 29 1015 3.31 14 48.28 113 11.13 15 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M4635_1.02 (Stat2)_(Homo_sapiens)_(DBD_0.81) GAAANYGAAACTDAA 1.17e-6 4.15e-4 2.98e-1 354 29 29 1015 1.38 21 72.41 282 27.78 16 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5593_1.02 (Klf16)_(Homo_sapiens)_(DBD_0.92) GGGGGCGTGKC 1.01e-6 4.48e-4 3.22e-1 445 29 29 1015 2.18 17 58.62 174 17.14 17 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6279_1.02 (Hmga1)_(Homo_sapiens)_(DBD_1.00) AAAATWN 9.08e-7 4.70e-4 3.37e-1 517 29 29 1015 2.17 19 65.52 222 21.87 18 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1265_1.02 Irf7 DAARCGAAAR 7.99e-7 5.51e-4 3.96e-1 690 29 29 1015 4.93 10 34.48 46 4.53 19 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0104_1.02 Arid3b AWATTAATWAN 2.51e-6 7.17e-4 5.15e-1 286 29 29 1015 1.19 19 65.52 237 23.35 20 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0728_1.02 Foxj1 NRTAAACAAANN 1.94e-6 8.34e-4 5.99e-1 430 29 29 1015 2.55 18 62.07 207 20.39 21 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0131_1.02 Ahctf1 AAATAAAT 2.02e-6 1.08e-3 7.72e-1 533 29 29 1015 4.87 14 48.28 118 11.63 22 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M4453_1.02 (Bcl11a)_(Homo_sapiens)_(DBD_1.00) ADGRGGAASTGARAV 2.41e-6 1.20e-3 8.65e-1 500 29 29 1015 2.09 21 72.41 294 28.97 23 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6127_1.02 Klf2 DGGGYGKGGCB 2.75e-6 1.23e-3 8.84e-1 448 29 29 1015 1.81 18 62.07 212 20.89 24 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6121_1.02 Pou5f1 TTTRCATDWVAAARR 3.62e-6 1.24e-3 8.90e-1 343 29 29 1015 1.5 20 68.97 271 26.70 25 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0732_1.02 Foxc2 WRNRTMAAYA 2.57e-6 1.26e-3 9.06e-1 491 29 29 1015 2.27 15 51.72 141 13.89 26 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2274_1.02 Egr2 GKGYGTGGGYGKRDS 5.03e-6 1.81e-3 1.30e0 361 29 29 1015 1.87 18 62.07 221 21.77 27 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0734_1.02 Foxc1 WRNRTMAAYA 4.71e-6 2.37e-3 1.70e0 503 29 29 1015 1.62 18 62.07 220 21.67 28 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5856_1.02 (Sp8)_(Homo_sapiens)_(DBD_1.00) RGKGGGCGTGGY 6.00e-6 2.48e-3 1.78e0 414 29 29 1015 2.24 13 44.83 110 10.84 29 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1268_1.02 Irf2 RWANYGAAAS 3.86e-6 2.54e-3 1.82e0 658 29 29 1015 2.15 18 62.07 217 21.38 30 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1066_1.02 Tlx2 TAWTTAAT 8.67e-6 2.54e-3 1.82e0 293 29 29 1015 1.09 19 65.52 257 25.32 31 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0913_1.02 Hoxc11 DTTWAYKRBN 6.14e-6 2.67e-3 1.92e0 436 29 29 1015 1.3 20 68.97 280 27.59 32 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M4466_1.02 (Mef2a)_(Homo_sapiens)_(DBD_1.00) NDKCYAAAAATAGMH 1.20e-5 3.79e-3 2.72e0 315 29 29 1015 1.04 20 68.97 292 28.77 33 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0747_1.02 Foxl1 NNNRTAAAYA 1.01e-5 4.34e-3 3.12e0 430 29 29 1015 1.81 18 62.07 232 22.86 34 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1157_1.02 (Hoxb9)_(PBM_CONSTRUCTS)_(DBD_1.00) WTTWATKRBN 1.08e-5 5.14e-3 3.69e0 479 29 29 1015 1.53 18 62.07 233 22.96 35 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0635_1.02 Dmrtc2 NAMATGTATHMWN 2.63e-5 6.19e-3 4.44e0 236 29 29 1015 3.24 9 31.03 55 5.42 36 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0746_1.02 Gm5294 NNTRTAAACAHN 1.83e-5 6.48e-3 4.65e0 356 29 29 1015 1.3 19 65.52 270 26.60 37 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M4473_1.02 (Pbx3)_(Homo_sapiens)_(DBD_1.00) NBCRGCCAATSRGVR 2.89e-5 1.01e-2 7.25e0 351 29 29 1015 2.02 13 44.83 128 12.61 38 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1594_1.02 Sox12 HWTTGTYNNN 1.88e-5 1.06e-2 7.63e0 568 29 29 1015 1.44 22 75.86 365 35.96 39 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M5697_1.02 (Onecut3)_(Homo_sapiens)_(DBD_0.98) DTTATYGATTTTTY 5.62e-5 1.08e-2 7.79e0 194 29 29 1015 1.22 14 48.28 159 15.67 # AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28 # The format of this file is described at http://meme-suite.org/doc/ame-output-format.html. # ame --control --shuffle-- -o AME-CISBP_Mus_musculus-mm10-refFlat-2014-10-26.TSS-500bp.Greygenes_Loose ../mm10-refFlat-2014-10-26.TSS-500bp.Greygenes_Loose.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme