rank motif_DB motif_ID motif_alt_ID consensus p-value adj_p-value E-value tests FASTA_max pos neg PWM_min TP %TP FP %FP 1 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M1582_1.02 Hmg20b NWAWATAATWN 1.36e-7 2.62e-5 1.88e-2 192 19 19 1007 2.55 9 47.37 47 4.67 2 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6482_1.02 (Sp3)_(Homo_sapiens)_(DBD_0.97) VGVVGGGGGCGGGGCBRGSS 6.48e-8 3.86e-5 2.77e-2 595 19 19 1007 6.63 12 63.16 104 10.33 3 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2314_1.02 (Sp2)_(Homo_sapiens)_(DBD_1.00) SSSVRGRGGCGGGRC 7.54e-8 4.50e-5 3.23e-2 597 19 19 1007 6.76 10 52.63 61 6.06 4 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2391_1.02 (Klf5)_(Homo_sapiens)_(DBD_0.95) DGGGHGGGGC 5.09e-7 3.11e-4 2.24e-1 612 19 19 1007 4.65 10 52.63 76 7.55 5 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0104_1.02 Arid3b AWATTAATWAN 1.87e-6 5.09e-4 3.66e-1 273 19 19 1007 2.17 11 57.89 114 11.32 6 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6336_1.02 (Maz)_(Homo_sapiens)_(DBD_0.98) RGGGDRGGGAGGGRGGG 1.18e-6 7.12e-4 5.11e-1 603 19 19 1007 9.29 12 63.16 137 13.60 7 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0732_1.02 Foxc2 WRNRTMAAYA 2.24e-6 1.04e-3 7.50e-1 467 19 19 1007 3.23 5 26.32 9 0.89 8 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0734_1.02 Foxc1 WRNRTMAAYA 2.24e-6 1.05e-3 7.54e-1 470 19 19 1007 2.91 5 26.32 9 0.89 9 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6241_1.02 (Foxn3)_(Homo_sapiens)_(DBD_0.45) WAAAYAAACA 3.32e-6 1.08e-3 7.76e-1 326 19 19 1007 11.3 5 26.32 10 0.99 10 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6123_1.02 Zfp281 GRGKTGGGGGAGGGG 3.85e-6 1.81e-3 1.30e0 471 19 19 1007 7.29 10 52.63 96 9.53 11 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6456_1.02 (Rreb1)_(Homo_sapiens)_(DBD_0.99) DKGKKKGKGGKTGKTTKGGGKT 1.04e-5 2.09e-3 1.50e0 201 19 19 1007 3.99 8 42.11 60 5.96 12 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6535_1.02 (Wt1)_(Homo_sapiens)_(DBD_0.99) GMGGGGGCGKGGG 5.75e-6 2.70e-3 1.94e0 470 19 19 1007 1.03 18 94.74 446 44.29 13 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2318_1.02 Tcf3 SMCAGCTGCHB 9.29e-6 4.05e-3 2.91e0 437 19 19 1007 4.98 8 42.11 59 5.86 14 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6552_1.02 (Zfp148)_(Homo_sapiens)_(DBD_1.00) KGVGKGGGGGAGGGG 7.42e-6 4.43e-3 3.18e0 599 19 19 1007 3.59 14 73.68 238 23.63 15 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6321_1.02 (Klf15)_(Homo_sapiens)_(DBD_1.00) RSMKGGGAGDKGGGGSS 1.00e-5 5.11e-3 3.67e0 510 19 19 1007 2.13 14 73.68 244 24.23 16 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6136_1.02 Bcl6 RRRDRRVVRRRRRRRRGGAAGWVWKGRARA 1.21e-5 6.85e-3 4.92e0 570 19 19 1007 1.77 18 94.74 466 46.28 17 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6212_1.02 (Hif3a)_(Homo_sapiens)_(DBD_0.74) CMCACGYAYDCAC 5.23e-5 6.93e-3 4.97e0 133 19 19 1007 1.31 8 42.11 76 7.55 18 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0133_1.02 Phf21a NNWATATWAATT 2.31e-5 8.14e-3 5.84e0 354 19 19 1007 1.65 13 68.42 220 21.85 19 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0721_1.02 Foxj2 RTMAACANN 2.37e-5 9.99e-3 7.17e0 423 19 19 1007 2.2 6 31.58 30 2.98 20 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0405_1.02 Klf7 DGGGCGKGGY 2.13e-5 1.08e-2 7.73e0 507 19 19 1007 3.38 3 15.79 1 0.10 21 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M2271_1.02 E2f3 SDSYGVGGGCGGGAR 3.19e-5 1.26e-2 9.04e0 397 19 19 1007 1.17 15 78.95 315 31.28 22 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M0421_1.02 Klf8 NGGGYGKGKN 2.13e-5 1.29e-2 9.26e0 608 19 19 1007 2.13 3 15.79 1 0.10 23 /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme M6166_1.02 (Cdc5l)_(Homo_sapiens)_(DBD_1.00) RWTAYRTTAAMWCVC 8.74e-5 1.36e-2 9.78e0 157 19 19 1007 1.62 8 42.11 82 8.14 # AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28 # The format of this file is described at http://meme-suite.org/doc/ame-output-format.html. # ame --control --shuffle-- -o AME-CISBP_Mus_musculus-mm10-refFlat-2014-10-26.TSS-500bp.Greengenes_Loose ../mm10-refFlat-2014-10-26.TSS-500bp.Greengenes_Loose.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme