rank	motif_DB	motif_ID	motif_alt_ID	consensus	p-value	adj_p-value	E-value	tests	FASTA_max	pos	neg	PWM_min	TP	%TP	FP	%FP
1	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6336_1.02	(Maz)_(Homo_sapiens)_(DBD_0.98)	RGGGDRGGGAGGGRGGG	5.49e-16	3.65e-13	2.62e-10	665	24	24	1008	8.75	21	87.50	125	12.40
2	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6123_1.02	Zfp281	GRGKKGGGGGAGGGG	1.42e-13	7.11e-11	5.10e-8	500	24	24	1008	6.05	19	79.17	117	11.61
3	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6482_1.02	(Sp3)_(Homo_sapiens)_(DBD_0.97)	VGVVGGGGGCGGGGCBRGSS	1.10e-13	7.44e-11	5.34e-8	677	24	24	1008	10.8	14	58.33	37	3.67
4	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6552_1.02	(Zfp148)_(Homo_sapiens)_(DBD_1.00)	KGVGKGGGGGAGGGG	1.42e-12	9.33e-10	6.70e-7	658	24	24	1008	6.04	19	79.17	134	13.29
5	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2314_1.02	(Sp2)_(Homo_sapiens)_(DBD_1.00)	SSSVRGRGGCGGGRC	1.69e-12	1.07e-9	7.71e-7	635	24	24	1008	3.69	20	83.33	161	15.97
6	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2391_1.02	(Klf5)_(Homo_sapiens)_(DBD_0.95)	DGGGHGGGGC	3.98e-11	2.66e-8	1.91e-5	669	24	24	1008	4.16	15	62.50	77	7.64
7	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6239_1.02	(Foxf2)_(Homo_sapiens)_(DBD_1.00)	HWADGTAAACA	1.33e-10	3.72e-8	2.67e-5	280	24	24	1008	1.73	19	79.17	175	17.36
8	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0434_1.02	Zscan4c	KVTGTGCAB	2.34e-10	8.15e-8	5.85e-5	348	24	24	1008	1.15	21	87.50	246	24.40
9	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6456_1.02	(Rreb1)_(Homo_sapiens)_(DBD_0.99)	DKGKKKGKGGKTGKTTKGGGKT	3.75e-10	1.08e-7	7.75e-5	288	24	24	1008	2.17	19	79.17	186	18.45
10	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4640_1.02	(Zbtb7a)_(Homo_sapiens)_(DBD_1.00)	GGGSRRGGGKCBSBG	8.24e-9	5.70e-6	4.10e-3	692	24	24	1008	3.17	16	66.67	139	13.79
11	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6136_1.02	Bcl6	RRRDRRVVRRRRRRRRGGAAGWVWKGRARA	9.60e-9	5.86e-6	4.21e-3	610	24	24	1008	13.7	17	70.83	166	16.47
12	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6234_1.02	(Foxa3)_(Homo_sapiens)_(DBD_1.00)	RVWAARYAAAYAD	2.60e-8	8.20e-6	5.89e-3	315	24	24	1008	3.14	16	66.67	151	14.98
13	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6024_1.02	Hlf	BRTTACGTAAYM	5.27e-7	1.79e-5	1.29e-2	34	24	24	1008	1.75	7	29.17	18	1.79
14	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6321_1.02	(Klf15)_(Homo_sapiens)_(DBD_1.00)	RSMKGGGAGDKGGGGSS	4.51e-8	2.45e-5	1.76e-2	544	24	24	1008	4.38	14	58.33	110	10.91
15	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2271_1.02	E2f3	SDSYGVGGGCGGGAR	6.87e-8	2.55e-5	1.83e-2	371	24	24	1008	15.6	6	25.00	6	0.60
16	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0411_1.02	Zfp300	NNYNRTGTATAMNNN	1.23e-7	2.73e-5	1.96e-2	221	24	24	1008	1.13	16	66.67	169	16.77
17	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6201_1.02	(Egr4)_(Homo_sapiens)_(DBD_1.00)	GGSGGYRGGGM	1.39e-7	5.89e-5	4.23e-2	424	24	24	1008	2.2	18	75.00	230	22.82
18	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6241_1.02	(Foxn3)_(Homo_sapiens)_(DBD_0.45)	WAAAYAAACA	2.17e-7	6.04e-5	4.34e-2	279	24	24	1008	1.7	17	70.83	205	20.34
19	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6545_1.02	(Hivep2)_(Homo_sapiens)_(DBD_1.00)	GGYDGGGWAACYSS	2.26e-7	8.84e-5	6.35e-2	391	24	24	1008	9.8	4	16.67	0	0.00
20	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0734_1.02	Foxc1	WRNRTMAAYA	3.16e-7	1.32e-4	9.47e-2	417	24	24	1008	1.38	16	66.67	181	17.96
21	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0630_1.02	(Dmrt1)_(Homo_sapiens)_(DBD_0.98)	WWTGTWDCNW	5.31e-7	1.58e-4	1.13e-1	297	24	24	1008	1.09	17	70.83	218	21.63
22	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1879_1.02	Foxa2	VCWRWGTAAACA	7.58e-7	1.97e-4	1.41e-1	260	24	24	1008	8.14	8	33.33	30	2.98
23	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0732_1.02	Foxc2	WRNRTMAAYA	4.94e-7	1.98e-4	1.43e-1	402	24	24	1008	1.42	16	66.67	187	18.55
24	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1268_1.02	Irf2	RWANYGAAAS	3.59e-7	2.23e-4	1.60e-1	621	24	24	1008	1.24	22	91.67	410	40.67
25	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0737_1.02	Foxb1	WRWGTAAAYA	1.12e-6	3.25e-4	2.33e-1	291	24	24	1008	1.02	18	75.00	263	26.09
26	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0746_1.02	Gm5294	NNTRTAAACAHN	1.48e-6	4.52e-4	3.25e-1	305	24	24	1008	2.16	15	62.50	174	17.26
27	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4599_1.02	(E2f6)_(Homo_sapiens)_(DBD_0.98)	NRGGCGGGARR	9.51e-7	4.56e-4	3.28e-1	480	24	24	1008	2.47	15	62.50	168	16.67
28	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0307_1.02	Crebzf	WWACGTWD	7.55e-6	5.51e-4	3.96e-1	73	24	24	1008	5.29	4	16.67	3	0.30
29	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0726_1.02	Foxj3	NRTAAACAWW	1.81e-6	6.03e-4	4.33e-1	333	24	24	1008	12.8	6	25.00	13	1.29
30	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0641_1.02	(Dmrta1)_(Drosophila_melanogaster)_(DBD_0.96)	WGTWDCNWWW	1.96e-6	6.56e-4	4.71e-1	335	24	24	1008	1.15	16	66.67	207	20.54
31	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0632_1.02	(Dmrta2)_(Homo_sapiens)_(DBD_1.00)	HHWGTWDYNN	1.67e-6	6.74e-4	4.84e-1	404	24	24	1008	1.23	14	58.33	149	14.78
32	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4453_1.02	(Bcl11a)_(Homo_sapiens)_(DBD_1.00)	ADGRGGAASTGARAV	1.62e-6	7.62e-4	5.47e-1	469	24	24	1008	1.06	22	91.67	442	43.85
33	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0397_1.02	Zfp263	GGGAGSAC	3.13e-6	1.61e-3	1.15e0	515	24	24	1008	3.14	5	20.83	7	0.69
34	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6325_1.02	(Klf6)_(Homo_sapiens)_(DBD_1.00)	GGGGGCKG	2.94e-6	2.09e-3	1.50e0	711	24	24	1008	1.66	20	83.33	359	35.62
35	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6124_1.02	Sox17	BBCCATTGTYY	4.44e-6	2.21e-3	1.59e0	498	24	24	1008	2.49	16	66.67	220	21.83
36	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6212_1.02	(Hif3a)_(Homo_sapiens)_(DBD_0.74)	CMCACGYAYDCAC	1.11e-5	2.28e-3	1.64e0	206	24	24	1008	8.34	8	33.33	45	4.46
37	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1965_1.02	(Foxa1)_(Homo_sapiens)_(DBD_1.00)	HWRWGTAAACANVNN	9.44e-6	2.38e-3	1.71e0	252	24	24	1008	12.6	7	29.17	30	2.98
38	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M4767_1.02	(Prdm1)_(Drosophila_melanogaster)_(DBD_0.73)	RAAAGTGAAAGT	1.11e-5	2.58e-3	1.85e0	233	24	24	1008	2.27e+03	3	12.50	0	0.00
39	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0391_1.02	Bcl6b	NBCTAGAAARAN	4.56e-6	3.72e-3	2.67e0	817	24	24	1008	4.4	12	50.00	113	11.21
40	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0426_1.02	Zfp3	DGTGTGCGYNN	2.66e-5	4.06e-3	2.92e0	153	24	24	1008	1.31	10	41.67	89	8.83
41	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0724_1.02	Foxp2	RTAAACAA	1.38e-5	4.44e-3	3.19e0	322	24	24	1008	6.98	6	25.00	20	1.98
42	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0390_1.02	Zscan4	ATGTGCAC	2.63e-5	4.63e-3	3.32e0	176	24	24	1008	1.5	9	37.50	69	6.85
43	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0747_1.02	Foxl1	NNNRTAAAYA	1.73e-5	5.90e-3	4.23e0	342	24	24	1008	1.14	17	70.83	278	27.58
44	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1604_1.02	Sox4	YWTTGTYNN	1.07e-5	6.00e-3	4.30e0	563	24	24	1008	1.67	16	66.67	235	23.31
45	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M2283_1.02	(Foxp4)_(Homo_sapiens)_(DBD_0.87)	MWWADGTAAACAAAR	2.19e-5	7.71e-3	5.53e0	353	24	24	1008	2.71	15	62.50	216	21.43
46	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6122_1.02	Sfpi1	ARAAAGAGGAAGTGR	1.38e-5	8.22e-3	5.90e0	599	24	24	1008	4.69	15	62.50	208	20.63
47	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M5889_1.02	(Tbx21)_(Homo_sapiens)_(DBD_0.98)	GGTGTGAHWTCACACC	1.18e-4	8.80e-3	6.32e0	75	24	24	1008	2.67	6	25.00	31	3.08
48	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0728_1.02	Foxj1	NRTAAACAAANN	2.41e-5	9.26e-3	6.65e0	386	24	24	1008	1.87	16	66.67	250	24.80
49	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M6237_1.02	(Foxd3)_(Homo_sapiens)_(DBD_1.00)	AAACAAACA	2.57e-5	9.73e-3	6.99e0	380	24	24	1008	1.51	17	70.83	286	28.37
50	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M0723_1.02	Foxg1	NNRWMAAYAN	3.12e-5	1.25e-2	8.96e0	402	24	24	1008	1.13	16	66.67	255	25.30
51	/home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme	M1863_1.02	(Foxd2)_(Homo_sapiens)_(DBD_1.00)	GTAAACAW	5.40e-5	1.31e-2	9.40e0	244	24	24	1008	11.9	5	20.83	15	1.49

# AME (Analysis of Motif Enrichment): Version 5.0.1 compiled on Aug 20 2018 at 02:27:28
# The format of this file is described at http://meme-suite.org/doc/ame-output-format.html.
# ame --control --shuffle-- -o AME-CISBP_Mus_musculus-gencode.vM4.annotation.TSS-500bp.ChondroOsteoFinalGenes ../gencode.vM4.annotation.TSS-500bp.ChondroOsteoFinalGenes.fa /home/users/marinovg/programs/meme_4.11.2/motif_databases/CIS-BP/Mus_musculus.meme