## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[tibial_nerve-ENCSR831KAH-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.bam] OUTPUT=tibial_nerve-ENCSR831KAH-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.dedup.bam METRICS_FILE=tibial_nerve-ENCSR831KAH-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Sep 04 10:20:24 PDT 2019

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	40734002	0	0	3448718	2269251	0.084664	614317589

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.057062
2.0	2.046307
3.0	2.972084
4.0	3.838466
5.0	4.649263
6.0	5.408042
7.0	6.11814
8.0	6.78268
9.0	7.404585
10.0	7.98659
11.0	8.531256
12.0	9.040977
13.0	9.517996
14.0	9.964411
15.0	10.382185
16.0	10.773156
17.0	11.139043
18.0	11.481456
19.0	11.801901
20.0	12.101787
21.0	12.382433
22.0	12.645074
23.0	12.890864
24.0	13.120885
25.0	13.336149
26.0	13.537602
27.0	13.72613
28.0	13.902563
29.0	14.067677
30.0	14.222197
31.0	14.366803
32.0	14.502133
33.0	14.628779
34.0	14.747301
35.0	14.858218
36.0	14.96202
37.0	15.059161
38.0	15.150071
39.0	15.235148
40.0	15.314766
41.0	15.389277
42.0	15.459007
43.0	15.524263
44.0	15.585333
45.0	15.642485
46.0	15.69597
47.0	15.746023
48.0	15.792866
49.0	15.836703
50.0	15.877727
51.0	15.91612
52.0	15.952049
53.0	15.985673
54.0	16.01714
55.0	16.046588
56.0	16.074147
57.0	16.099938
58.0	16.124074
59.0	16.146662
60.0	16.1678
61.0	16.187582
62.0	16.206096
63.0	16.223421
64.0	16.239635
65.0	16.254808
66.0	16.269008
67.0	16.282297
68.0	16.294734
69.0	16.306372
70.0	16.317264
71.0	16.327457
72.0	16.336996
73.0	16.345923
74.0	16.354278
75.0	16.362096
76.0	16.369413
77.0	16.37626
78.0	16.382668
79.0	16.388665
80.0	16.394278
81.0	16.39953
82.0	16.404445
83.0	16.409045
84.0	16.413349
85.0	16.417378
86.0	16.421148
87.0	16.424676
88.0	16.427978
89.0	16.431068
90.0	16.43396
91.0	16.436666
92.0	16.439198
93.0	16.441569
94.0	16.443787
95.0	16.445862
96.0	16.447805
97.0	16.449623
98.0	16.451324
99.0	16.452916
100.0	16.454406