## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[foreskin_keratinocyte-ENCSR356KRQ-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.bam] OUTPUT=foreskin_keratinocyte-ENCSR356KRQ-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.dedup.bam METRICS_FILE=foreskin_keratinocyte-ENCSR356KRQ-rep1-1.2x36mers.hg38-no-haps.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Wed Sep 04 10:20:21 PDT 2019

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	57938287	0	0	13904083	7053602	0.239981	171610970

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.116668
2.0	1.913378
3.0	2.481807
4.0	2.887365
5.0	3.176718
6.0	3.383163
7.0	3.530455
8.0	3.635544
9.0	3.710522
10.0	3.764016
11.0	3.802183
12.0	3.829414
13.0	3.848842
14.0	3.862704
15.0	3.872594
16.0	3.87965
17.0	3.884684
18.0	3.888276
19.0	3.890839
20.0	3.892667
21.0	3.893971
22.0	3.894902
23.0	3.895566
24.0	3.89604
25.0	3.896378
26.0	3.896619
27.0	3.896791
28.0	3.896914
29.0	3.897002
30.0	3.897064
31.0	3.897109
32.0	3.897141
33.0	3.897163
34.0	3.897179
35.0	3.897191
36.0	3.897199
37.0	3.897205
38.0	3.897209
39.0	3.897212
40.0	3.897214
41.0	3.897216
42.0	3.897217
43.0	3.897218
44.0	3.897218
45.0	3.897219
46.0	3.897219
47.0	3.897219
48.0	3.897219
49.0	3.89722
50.0	3.89722
51.0	3.89722
52.0	3.89722
53.0	3.89722
54.0	3.89722
55.0	3.89722
56.0	3.89722
57.0	3.89722
58.0	3.89722
59.0	3.89722
60.0	3.89722
61.0	3.89722
62.0	3.89722
63.0	3.89722
64.0	3.89722
65.0	3.89722
66.0	3.89722
67.0	3.89722
68.0	3.89722
69.0	3.89722
70.0	3.89722
71.0	3.89722
72.0	3.89722
73.0	3.89722
74.0	3.89722
75.0	3.89722
76.0	3.89722
77.0	3.89722
78.0	3.89722
79.0	3.89722
80.0	3.89722
81.0	3.89722
82.0	3.89722
83.0	3.89722
84.0	3.89722
85.0	3.89722
86.0	3.89722
87.0	3.89722
88.0	3.89722
89.0	3.89722
90.0	3.89722
91.0	3.89722
92.0	3.89722
93.0	3.89722
94.0	3.89722
95.0	3.89722
96.0	3.89722
97.0	3.89722
98.0	3.89722
99.0	3.89722
100.0	3.89722