#!/bin/bash

#PBS -l walltime=200:00:00
#PBS -l nodes=1:ppn=1
#PBS -l mem=200gb
#PBS -j oe
#PBS -k oe
##PBS -m n
#PBS -m abe
#PBS -V
#PBS -N iguide-hg38
#PBS -o output-hg38

cd $PBS_O_WORKDIR

command="python /cbio/cllab/projects/pritykin/CRISPR/iguide-crispr/iguide/processer.py -f hg38-fasta -n hg38_all --minchr 0 -d -1  >.hg38_all"

echo $command

eval $command