python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13004-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13004-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13006-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13006-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13189-JT-vs-N-JT.fixed.padj-0.05-down ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13189-JT-vs-N-JT.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13190-JT-vs-N-JT.fixed.padj-0.05-down ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13190-JT-vs-N-JT.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.15171-JT-vs-N-JT.fixed.padj-0.05-down ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.15171-JT-vs-N-JT.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.15173-JT-vs-N-JT.fixed.padj-0.05-down ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.15173-JT-vs-N-JT.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13004-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13004-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13006-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13006-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13189-JT-vs-N-JT.fixed.padj-0.05-down ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13189-JT-vs-N-JT.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13190-JT-vs-N-JT.fixed.padj-0.05-down ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13190-JT-vs-N-JT.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.15171-JT-vs-N-JT.fixed.padj-0.05-down ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.15171-JT-vs-N-JT.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.15173-JT-vs-N-JT.fixed.padj-0.05-down ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.15173-JT-vs-N-JT.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.12040-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.12040-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.12042-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.12042-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.13004-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.13004-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.13006-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.13006-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.14376-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.14376-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.14377-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.14377-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.12040-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.12040-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.12042-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.12042-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.13004-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.13004-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.13006-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.13006-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.14376-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.14376-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.14377-vs-N.fixed.padj-0.05-down ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.14377-vs-N.fixed.padj-0.05-down.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13004-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13004-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13006-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13006-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13189-JT-vs-N-JT.fixed.padj-0.05-up ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13189-JT-vs-N-JT.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13190-JT-vs-N-JT.fixed.padj-0.05-up ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13190-JT-vs-N-JT.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.15171-JT-vs-N-JT.fixed.padj-0.05-up ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.15171-JT-vs-N-JT.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.15173-JT-vs-N-JT.fixed.padj-0.05-up ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.15173-JT-vs-N-JT.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13004-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13004-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13006-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13006-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13189-JT-vs-N-JT.fixed.padj-0.05-up ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13189-JT-vs-N-JT.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13190-JT-vs-N-JT.fixed.padj-0.05-up ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13190-JT-vs-N-JT.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.15171-JT-vs-N-JT.fixed.padj-0.05-up ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.15171-JT-vs-N-JT.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.15173-JT-vs-N-JT.fixed.padj-0.05-up ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.15173-JT-vs-N-JT.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.12040-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.12040-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.12042-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.12042-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.13004-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.13004-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.13006-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.13006-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.14376-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.14376-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.14377-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.14377-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.12040-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.12040-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.12042-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.12042-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.13004-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.13004-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.13006-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.13006-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.14376-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.14376-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.14377-vs-N.fixed.padj-0.05-up ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.14377-vs-N.fixed.padj-0.05-up.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13004-vs-N.fixed.txt ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13004-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13006-vs-N.fixed.txt ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13006-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13189-JT-vs-N-JT.fixed.txt ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13189-JT-vs-N-JT.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13190-JT-vs-N-JT.fixed.txt ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.13190-JT-vs-N-JT.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.15171-JT-vs-N-JT.fixed.txt ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.15171-JT-vs-N-JT.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.15173-JT-vs-N-JT.fixed.txt ../repeatMasker.rawCounts.class.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.classes.15173-JT-vs-N-JT.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13004-vs-N.fixed.txt ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13004-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13006-vs-N.fixed.txt ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13006-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13189-JT-vs-N-JT.fixed.txt ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13189-JT-vs-N-JT.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13190-JT-vs-N-JT.fixed.txt ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.13190-JT-vs-N-JT.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.15171-JT-vs-N-JT.fixed.txt ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.15171-JT-vs-N-JT.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.15173-JT-vs-N-JT.fixed.txt ../repeatMasker.rawCounts.repeat.table 0 2017-07-14-RSEM.genes.expected_counts.int.sumDups.repeats.15173-JT-vs-N-JT.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.12040-vs-N.fixed.txt ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.12040-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.12042-vs-N.fixed.txt ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.12042-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.13004-vs-N.fixed.txt ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.13004-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.13006-vs-N.fixed.txt ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.13006-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.14376-vs-N.fixed.txt ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.14376-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.14377-vs-N.fixed.txt ../repeatMasker.rawCounts.class.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.classes.14377-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.12040-vs-N.fixed.txt ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.12040-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.12042-vs-N.fixed.txt ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.12042-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.13004-vs-N.fixed.txt ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.13004-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.13006-vs-N.fixed.txt ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.13006-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.14376-vs-N.fixed.txt ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.14376-vs-N.fixed.txt.rep-only -header
python /oak/stanford/groups/akundaje/marinovg/code/extractDataFromAListOfGenes.py 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.14377-vs-N.fixed.txt ../repeatMasker.rawCounts.repeat.table 0 2017-08-14-RSEM.genes.expected_counts.int.sumDups.repeats.14377-vs-N.fixed.txt.rep-only -header