python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Homo_sapiens-human_ChIP_1-ERR022295.36mers.unique.bam SAMstats-Homo_sapiens-human_ChIP_1-ERR022295 -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Homo_sapiens-human_ChIP_2-ERR022303.36mers.unique.bam SAMstats-Homo_sapiens-human_ChIP_2-ERR022303 -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Homo_sapiens-human_input_1-ERR022276.36mers.unique.bam SAMstats-Homo_sapiens-human_input_1-ERR022276 -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Homo_sapiens-human_input_2-ERR022300.36mers.unique.bam SAMstats-Homo_sapiens-human_input_2-ERR022300 -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Macaca_mulatta-macaque_ChIP_1-ERR022289.36mers.unique.bam SAMstats-Macaca_mulatta-macaque_ChIP_1-ERR022289 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Macaca_mulatta.MMUL_1/Macaca_mulatta.MMUL_1.dna.toplevel.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Macaca_mulatta-macaque_ChIP_2-ERR022274.36mers.unique.bam SAMstats-Macaca_mulatta-macaque_ChIP_2-ERR022274 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Macaca_mulatta.MMUL_1/Macaca_mulatta.MMUL_1.dna.toplevel.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Macaca_mulatta-macaque_ChIP_3-ERR022275.36mers.unique.bam SAMstats-Macaca_mulatta-macaque_ChIP_3-ERR022275 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Macaca_mulatta.MMUL_1/Macaca_mulatta.MMUL_1.dna.toplevel.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Macaca_mulatta-macaque_input_1-ERR022292.36mers.unique.bam SAMstats-Macaca_mulatta-macaque_input_1-ERR022292 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Macaca_mulatta.MMUL_1/Macaca_mulatta.MMUL_1.dna.toplevel.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Macaca_mulatta-macaque_input_2-ERR022287.36mers.unique.bam SAMstats-Macaca_mulatta-macaque_input_2-ERR022287 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Macaca_mulatta.MMUL_1/Macaca_mulatta.MMUL_1.dna.toplevel.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Mus_musculus-mouse_ChIP_1-ERR022291.36mers.unique.bam SAMstats-Mus_musculus-mouse_ChIP_1-ERR022291 -bam /oak/stanford/groups/akundaje/marinovg/genomes/mm9/mm9.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Mus_musculus-mouse_ChIP_2-ERR022305.36mers.unique.bam SAMstats-Mus_musculus-mouse_ChIP_2-ERR022305 -bam /oak/stanford/groups/akundaje/marinovg/genomes/mm9/mm9.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Mus_musculus-mouse_input_1-ERR022272.36mers.unique.bam SAMstats-Mus_musculus-mouse_input_1-ERR022272 -bam /oak/stanford/groups/akundaje/marinovg/genomes/mm9/mm9.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Mus_musculus-mouse_input_2-ERR022296.36mers.unique.bam SAMstats-Mus_musculus-mouse_input_2-ERR022296 -bam /oak/stanford/groups/akundaje/marinovg/genomes/mm9/mm9.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Rattus_norvegicus-rat_ChIP_1-ERR022308.36mers.unique.bam SAMstats-Rattus_norvegicus-rat_ChIP_1-ERR022308 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/rn5/rn5.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Rattus_norvegicus-rat_ChIP_2-ERR022309.36mers.unique.bam SAMstats-Rattus_norvegicus-rat_ChIP_2-ERR022309 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/rn5/rn5.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Rattus_norvegicus-rat_input_1-ERR022310.36mers.unique.bam SAMstats-Rattus_norvegicus-rat_input_1-ERR022310 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/rn5/rn5.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Rattus_norvegicus-rat_input_2-ERR022311.36mers.unique.bam SAMstats-Rattus_norvegicus-rat_input_2-ERR022311 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/rn5/rn5.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Canis_familiaris-dog_ChIP_1-ERR022286.36mers.unique.bam SAMstats-Canis_familiaris-dog_ChIP_1-ERR022286 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/canFam3/canFam3.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Canis_familiaris-dog_ChIP_2-ERR022304.36mers.unique.bam SAMstats-Canis_familiaris-dog_ChIP_2-ERR022304 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/canFam3/canFam3.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Canis_familiaris-dog_input_1-ERR022270.36mers.unique.bam SAMstats-Canis_familiaris-dog_input_1-ERR022270 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/canFam3/canFam3.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Canis_familiaris-dog_input_2-ERR022271.36mers.unique.bam SAMstats-Canis_familiaris-dog_input_2-ERR022271 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/canFam3/canFam3.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Canis_familiaris-dog_input_3-ERR022285.36mers.unique.bam SAMstats-Canis_familiaris-dog_input_3-ERR022285 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/canFam3/canFam3.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Monodelphis_domesticus-opossum_ChIP_1-ERR022306.36mers.unique.bam SAMstats-Monodelphis_domesticus-opossum_ChIP_1-ERR022306 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Monodelphis_domestica/Monodelphis_domestica.BROADO5.73.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Monodelphis_domesticus-opossum_ChIP_2-ERR022301.36mers.unique.bam SAMstats-Monodelphis_domesticus-opossum_ChIP_2-ERR022301 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Monodelphis_domestica/Monodelphis_domestica.BROADO5.73.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Monodelphis_domesticus-opossum_input_1-ERR022302.36mers.unique.bam SAMstats-Monodelphis_domesticus-opossum_input_1-ERR022302 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Monodelphis_domestica/Monodelphis_domestica.BROADO5.73.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Monodelphis_domesticus-opossum_input_2-ERR022307.36mers.unique.bam SAMstats-Monodelphis_domesticus-opossum_input_2-ERR022307 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Monodelphis_domestica/Monodelphis_domestica.BROADO5.73.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools