python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 13004_1_CTCFvalidationRNAseq_170812_S9-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 13004_1_CTCFvalidationRNAseq_170812_S9-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 13004_2_CTCFvalidationRNAseq_170812_S10-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 13004_2_CTCFvalidationRNAseq_170812_S10-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 13006_1_CTCFvalidationRNAseq_170812_S11-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 13006_1_CTCFvalidationRNAseq_170812_S11-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 13006_2_CTCFvalidationRNAseq_170812_S12-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 13006_2_CTCFvalidationRNAseq_170812_S12-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 12040-GH549_1_CTCFvalidationRNAseq_170812_S1-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 12040-GH549_1_CTCFvalidationRNAseq_170812_S1-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 12040-GH549_2_CTCFvalidationRNAseq_170812_S2-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 12040-GH549_2_CTCFvalidationRNAseq_170812_S2-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 12042-GH550_1_CTCFvalidationRNAseq_170812_S3-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 12042-GH550_1_CTCFvalidationRNAseq_170812_S3-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 12042-GH550_2_CTCFvalidationRNAseq_170812_S4-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 12042-GH550_2_CTCFvalidationRNAseq_170812_S4-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 14376-GH551_1_CTCFvalidationRNAseq_170812_S5-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 14376-GH551_1_CTCFvalidationRNAseq_170812_S5-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 14376-GH551_2_CTCFvalidationRNAseq_170812_S6-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 14376-GH551_2_CTCFvalidationRNAseq_170812_S6-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 14377-GH552_1_CTCFvalidationRNAseq_170812_S7-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 14377-GH552_1_CTCFvalidationRNAseq_170812_S7-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 14377-GH552_2_CTCFvalidationRNAseq_170812_S8-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 14377-GH552_2_CTCFvalidationRNAseq_170812_S8-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== N4293_1_CTCFvalidationRNAseq_170812_S13-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes N4293_1_CTCFvalidationRNAseq_170812_S13-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== N4293_2_CTCFvalidationRNAseq_170812_S14-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes N4293_2_CTCFvalidationRNAseq_170812_S14-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== N4871_1_CTCFvalidationRNAseq_170812_S15-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes N4871_1_CTCFvalidationRNAseq_170812_S15-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== N4871_2_CTCFvalidationRNAseq_170812_S16-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes N4871_2_CTCFvalidationRNAseq_170812_S16-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.RPM.wig -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 13004_1_CTCFvalidationRNAseq_170812_S9-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 13004_1_CTCFvalidationRNAseq_170812_S9-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 13004_2_CTCFvalidationRNAseq_170812_S10-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 13004_2_CTCFvalidationRNAseq_170812_S10-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 13006_1_CTCFvalidationRNAseq_170812_S11-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 13006_1_CTCFvalidationRNAseq_170812_S11-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 13006_2_CTCFvalidationRNAseq_170812_S12-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 13006_2_CTCFvalidationRNAseq_170812_S12-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 12040-GH549_1_CTCFvalidationRNAseq_170812_S1-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 12040-GH549_1_CTCFvalidationRNAseq_170812_S1-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 12040-GH549_2_CTCFvalidationRNAseq_170812_S2-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 12040-GH549_2_CTCFvalidationRNAseq_170812_S2-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 12042-GH550_1_CTCFvalidationRNAseq_170812_S3-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 12042-GH550_1_CTCFvalidationRNAseq_170812_S3-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 12042-GH550_2_CTCFvalidationRNAseq_170812_S4-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 12042-GH550_2_CTCFvalidationRNAseq_170812_S4-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 14376-GH551_1_CTCFvalidationRNAseq_170812_S5-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 14376-GH551_1_CTCFvalidationRNAseq_170812_S5-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 14376-GH551_2_CTCFvalidationRNAseq_170812_S6-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 14376-GH551_2_CTCFvalidationRNAseq_170812_S6-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 14377-GH552_1_CTCFvalidationRNAseq_170812_S7-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 14377-GH552_1_CTCFvalidationRNAseq_170812_S7-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== 14377-GH552_2_CTCFvalidationRNAseq_170812_S8-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes 14377-GH552_2_CTCFvalidationRNAseq_170812_S8-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== N4293_1_CTCFvalidationRNAseq_170812_S13-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes N4293_1_CTCFvalidationRNAseq_170812_S13-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== N4293_2_CTCFvalidationRNAseq_170812_S14-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes N4293_2_CTCFvalidationRNAseq_170812_S14-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== N4871_1_CTCFvalidationRNAseq_170812_S15-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes N4871_1_CTCFvalidationRNAseq_170812_S15-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== N4871_2_CTCFvalidationRNAseq_170812_S16-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-Aligned.sortedByCoord.out.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes N4871_2_CTCFvalidationRNAseq_170812_S16-2x50mers-STAR2.5.3a-GENCODEV19/STAR-2.5.3a-aAligned.sortedByCoord.out.unique.RPM.wig -nomulti -RPM -notitle &