Index of /kundaje/marinovg/oak/various/papers/2019_NComm_CTCF-screen/2017-08-14-CRISPR-RNA-seq

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[DIR]DESeq2-subset_of_reads/2017-08-16 16:30 -  
[DIR]DESeq2/2017-08-16 19:10 -  
[ ]N4293_1_CTCFvalidationRNAseq_170812_S13.fastq.lines2017-08-15 20:27 10  
[ ]N4293_2_CTCFvalidationRNAseq_170812_S14.fastq.lines2017-08-15 20:26 10  
[ ]N4871_1_CTCFvalidationRNAseq_170812_S15.fastq.lines2017-08-15 20:28 10  
[ ]N4871_2_CTCFvalidationRNAseq_170812_S16.fastq.lines2017-08-15 20:25 9  
[ ]RSEM.genes.TPM.files2017-08-15 14:08 2.4K 
[ ]RSEM.genes.TPM.sumDups.protein_coding.log2FPKM+1.min10TPM.table2017-08-16 18:03 1.8M 
[ ]RSEM.genes.TPM.sumDups.protein_coding.normalizedToMean.min10TPM.table2017-08-16 18:03 2.1M 
[ ]RSEM.genes.TPM.table2017-08-16 18:03 6.1M 
[ ]RSEM.genes.TPM.table.sumDups2017-08-16 18:03 4.3M 
[ ]RSEM.genes.TPM.table.sumDups.protein_coding2017-08-16 18:03 1.7M 
[ ]RSEM.genes.expected_counts.files2017-08-15 14:07 2.4K 
[ ]RSEM.genes.expected_counts.int.table.sumDups2017-08-16 18:03 2.6M 
[ ]RSEM.genes.expected_counts.table2017-08-16 18:03 6.3M 
[ ]RSEM.genes.expected_counts.table.sumDups2017-08-16 18:03 4.4M 
[TXT]RSEM.sh2017-08-14 22:54 6.4K 
[DIR]SAMstats-subset_of_reads/2017-08-16 16:30 -  
[ ]SAMstats.files2017-08-14 23:23 1.5K 
[TXT]SAMstats.sh2017-08-14 22:55 6.0K 
[ ]SAMstats.table2017-08-16 19:20 1.5K 
[DIR]SAMstats/2017-08-16 20:23 -  
[TXT]STAR.sh2017-08-14 22:54 15K 
[DIR]clustering-subset_of_reads/2017-08-15 19:10 -  
[DIR]clustering/2017-08-16 18:13 -  
[TXT]countreads.sh2017-08-14 22:43 2.0K 
[DIR]coverage-subset_of_reads/2017-08-16 16:30 -  
[ ]coverage.files2017-08-15 13:52 1.5K 
[TXT]coverage.sh2017-08-15 02:02 6.0K 
[ ]coverage.table2017-08-16 20:29 24K 
[DIR]coverage/2017-08-16 20:29 -  
[DIR]fastq-lines/2017-08-16 20:23 -  
[ ]guides-12040-12042.1MB.bed2017-08-15 19:27 24  
[ ]guides-13004-13006.1MB.bed2017-08-15 19:26 24  
[ ]guides-14376-14377.1MB.bed2017-08-15 19:26 22  
[TXT]gzip.sh2017-08-14 22:49 2.0K 
[TXT]makewigglefromBAM.sh2017-08-14 22:55 13K 
[DIR]sam_reads_in_genes-subset_of_reads/2017-08-16 16:30 -  
[ ]sam_reads_in_genes.files2017-08-15 13:52 1.7K 
[TXT]sam_reads_in_genes.sh2017-08-15 02:02 7.0K 
[ ]sam_reads_in_genes.table2017-08-16 19:23 1.4K 
[DIR]sam_reads_in_genes/2017-08-16 20:23 -  
[TXT]samtools-index.sh2017-08-14 22:54 3.1K 
[TXT]trim-paired.sh2017-08-14 22:46 7.5K 
[ ]z2017-08-16 19:18 4.1K 
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