cd /N/dc2/projects/marinovg/papers/2017-ENCODE-enhancers/2016-09-30-mm10-hg20-migration-G1E; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=G1E-GATA1-ENCFF001MOE-vs-ENCFF001MOM-ss.ChIP.pooled.sorted.pseudoRep1.bam -i=G1E-GATA1-ENCFF001MOE-vs-ENCFF001MOM-ss.Control.pooled.sorted.pseudoRep1.bam -p=16 -npeak=300000 -savr -savp -rf -odir=SPP-300K-G1E-GATA1-ENCFF001MOE-vs-ENCFF001MOM-ss-PooledPseudoRep1
cd /N/dc2/projects/marinovg/papers/2017-ENCODE-enhancers/2016-09-30-mm10-hg20-migration-G1E; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=G1E-GATA1-ENCFF001MOE-vs-ENCFF001MOM-ss.ChIP.pooled.sorted.pseudoRep2.bam -i=G1E-GATA1-ENCFF001MOE-vs-ENCFF001MOM-ss.Control.pooled.sorted.pseudoRep2.bam -p=16 -npeak=300000 -savr -savp -rf -odir=SPP-300K-G1E-GATA1-ENCFF001MOE-vs-ENCFF001MOM-ss-PooledPseudoRep2
cd /N/dc2/projects/marinovg/papers/2017-ENCODE-enhancers/2016-09-30-mm10-hg20-migration-G1E; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=G1E-ER4-24h-GATA1-Control-ENCFF001MRX-vs-ENCFF001MSL-ss.ChIP.pooled.sorted.pseudoRep1.bam -i=G1E-ER4-24h-GATA1-Control-ENCFF001MRX-vs-ENCFF001MSL-ss.Control.pooled.sorted.pseudoRep1.bam -p=16 -npeak=300000 -savr -savp -rf -odir=SPP-300K-G1E-ER4-24h-GATA1-Control-ENCFF001MRX-vs-ENCFF001MSL-ss-PooledPseudoRep1
cd /N/dc2/projects/marinovg/papers/2017-ENCODE-enhancers/2016-09-30-mm10-hg20-migration-G1E; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=G1E-ER4-24h-GATA1-Control-ENCFF001MRX-vs-ENCFF001MSL-ss.ChIP.pooled.sorted.pseudoRep2.bam -i=G1E-ER4-24h-GATA1-Control-ENCFF001MRX-vs-ENCFF001MSL-ss.Control.pooled.sorted.pseudoRep2.bam -p=16 -npeak=300000 -savr -savp -rf -odir=SPP-300K-G1E-ER4-24h-GATA1-Control-ENCFF001MRX-vs-ENCFF001MSL-ss-PooledPseudoRep2