cd /N/dc2/projects/marinovg/papers/2017-ENCODE-enhancers/2016-09-30-mm10-hg20-migration-G1E; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=G1E-GATA1-ENCFF001MOE-vs-ENCFF001MOM.ChIP.pooled.sorted.bam -i=G1E-GATA1-ENCFF001MOE-vs-ENCFF001MOM.Control.pooled.sorted.bam -p=16 -npeak=300000 -savr -savp -rf -odir=SPP-300K-G1E-GATA1-ENCFF001MOE-vs-ENCFF001MOM-Pooled
cd /N/dc2/projects/marinovg/papers/2017-ENCODE-enhancers/2016-09-30-mm10-hg20-migration-G1E; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=G1E-GATA2-ENCFF001MOI-vs-ENCFF001MOM.ChIP.pooled.sorted.bam -i=G1E-GATA2-ENCFF001MOI-vs-ENCFF001MOM.Control.pooled.sorted.bam -p=16 -npeak=300000 -savr -savp -rf -odir=SPP-300K-G1E-GATA2-ENCFF001MOI-vs-ENCFF001MOM-Pooled
cd /N/dc2/projects/marinovg/papers/2017-ENCODE-enhancers/2016-09-30-mm10-hg20-migration-G1E; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=G1E-TAL1-ENCFF001MPN-vs-ENCFF001MPP.ChIP.pooled.sorted.bam -i=G1E-TAL1-ENCFF001MPN-vs-ENCFF001MPP.Control.pooled.sorted.bam -p=16 -npeak=300000 -savr -savp -rf -odir=SPP-300K-G1E-TAL1-ENCFF001MPN-vs-ENCFF001MPP-Pooled
cd /N/dc2/projects/marinovg/papers/2017-ENCODE-enhancers/2016-09-30-mm10-hg20-migration-G1E; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=G1E-ER4-24h-TAL1-ENCFF001MTO-vs-ENCFF001MTM.ChIP.pooled.sorted.bam -i=G1E-ER4-24h-TAL1-ENCFF001MTO-vs-ENCFF001MTM.Control.pooled.sorted.bam -p=16 -npeak=300000 -savr -savp -rf -odir=SPP-300K-G1E-ER4-24h-TAL1-ENCFF001MTO-vs-ENCFF001MTM-Pooled
cd /N/dc2/projects/marinovg/papers/2017-ENCODE-enhancers/2016-09-30-mm10-hg20-migration-G1E; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=G1E-ER4-24h-GATA2-ENCFF001MSD-vs-ENCFF001MSI.ChIP.pooled.sorted.bam -i=G1E-ER4-24h-GATA2-ENCFF001MSD-vs-ENCFF001MSI.Control.pooled.sorted.bam -p=16 -npeak=300000 -savr -savp -rf -odir=SPP-300K-G1E-ER4-24h-GATA2-ENCFF001MSD-vs-ENCFF001MSI-Pooled
cd /N/dc2/projects/marinovg/papers/2017-ENCODE-enhancers/2016-09-30-mm10-hg20-migration-G1E; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=G1E-ER4-24h-GATA1-Control-ENCFF001MRX-vs-ENCFF001MSL.ChIP.pooled.sorted.bam -i=G1E-ER4-24h-GATA1-Control-ENCFF001MRX-vs-ENCFF001MSL.Control.pooled.sorted.bam -p=16 -npeak=300000 -savr -savp -rf -odir=SPP-300K-G1E-ER4-24h-GATA1-Control-ENCFF001MRX-vs-ENCFF001MSL-Pooled