<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<!-- Document definition -->
<!DOCTYPE MEME[
<!ELEMENT MEME (
  training_set,
  model, 
  motifs, 
  scanned_sites_summary?
)>
<!ATTLIST MEME 
  version CDATA #REQUIRED
  release CDATA #REQUIRED
>
<!-- Training-set elements -->
<!ELEMENT training_set (alphabet, ambigs, sequence+, letter_frequencies)>
<!ATTLIST training_set datafile CDATA #REQUIRED length CDATA #REQUIRED>
<!ELEMENT alphabet (letter+)>
<!ATTLIST alphabet id (amino-acid|nucleotide) #REQUIRED
                   length CDATA #REQUIRED>
<!ELEMENT ambigs (letter+)>
<!ELEMENT letter EMPTY>
<!ATTLIST letter id ID #REQUIRED>
<!ATTLIST letter symbol CDATA #REQUIRED>
<!ELEMENT sequence EMPTY>
<!ATTLIST sequence id ID #REQUIRED
                   name CDATA #REQUIRED
                   length CDATA #REQUIRED
                   weight CDATA #REQUIRED
>
<!ELEMENT letter_frequencies (alphabet_array)>

<!-- Model elements -->
<!ELEMENT model (
  command_line,
  host,
  type,
  nmotifs,
  evalue_threshold,
  object_function,
  min_width,
  max_width,
  minic,
  wg,
  ws,
  endgaps,
  minsites,
  maxsites,
  wnsites,
  prob,
  spmap,
  spfuzz,
  prior,
  beta,
  maxiter,
  distance,
  num_sequences,
  num_positions,
  seed,
  seqfrac,
  strands,
  priors_file,
  reason_for_stopping,
  background_frequencies
)>
<!ELEMENT command_line (#PCDATA)*>
<!ELEMENT host (#PCDATA)*>
<!ELEMENT type (#PCDATA)*>
<!ELEMENT nmotifs (#PCDATA)*>
<!ELEMENT evalue_threshold (#PCDATA)*>
<!ELEMENT object_function (#PCDATA)*>
<!ELEMENT min_width (#PCDATA)*>
<!ELEMENT max_width (#PCDATA)*>
<!ELEMENT minic (#PCDATA)*>
<!ELEMENT wg (#PCDATA)*>
<!ELEMENT ws (#PCDATA)*>
<!ELEMENT endgaps (#PCDATA)*>
<!ELEMENT minsites (#PCDATA)*>
<!ELEMENT maxsites (#PCDATA)*>
<!ELEMENT wnsites (#PCDATA)*>
<!ELEMENT prob (#PCDATA)*>
<!ELEMENT spmap (#PCDATA)*>
<!ELEMENT spfuzz (#PCDATA)*>
<!ELEMENT prior (#PCDATA)*>
<!ELEMENT beta (#PCDATA)*>
<!ELEMENT maxiter (#PCDATA)*>
<!ELEMENT distance (#PCDATA)*>
<!ELEMENT num_sequences (#PCDATA)*>
<!ELEMENT num_positions (#PCDATA)*>
<!ELEMENT seed (#PCDATA)*>
<!ELEMENT seqfrac (#PCDATA)*>
<!ELEMENT strands (#PCDATA)*>
<!ELEMENT priors_file (#PCDATA)*>
<!ELEMENT reason_for_stopping (#PCDATA)*>
<!ELEMENT background_frequencies (alphabet_array)>
<!ATTLIST background_frequencies source CDATA #REQUIRED>

<!-- Motif elements -->
<!ELEMENT motifs (motif+)>
<!ELEMENT motif (scores, probabilities, regular_expression?, contributing_sites)>
<!ATTLIST motif id ID #REQUIRED
                name CDATA #REQUIRED
                width CDATA #REQUIRED
                sites CDATA #REQUIRED
                llr CDATA #REQUIRED
                ic CDATA #REQUIRED
                re CDATA #REQUIRED
                bayes_threshold CDATA #REQUIRED
                e_value CDATA #REQUIRED
                elapsed_time CDATA #REQUIRED
                url CDATA ""
>
<!ELEMENT scores (alphabet_matrix)>
<!ELEMENT probabilities (alphabet_matrix)>
<!ELEMENT regular_expression (#PCDATA)*>

<!-- Contributing site elements -->
<!-- Contributing sites are motif occurences found during the motif discovery phase -->
<!ELEMENT contributing_sites (contributing_site+)>
<!ELEMENT contributing_site (left_flank, site, right_flank)>
<!ATTLIST contributing_site sequence_id IDREF #REQUIRED
                          position CDATA #REQUIRED
                          strand (plus|minus|none) 'none'
                          pvalue CDATA #REQUIRED
>
<!-- The left_flank contains the sequence for 10 bases to the left of the motif start -->
<!ELEMENT left_flank (#PCDATA)>
<!-- The site contains the sequence for the motif instance -->
<!ELEMENT site (letter_ref+)>
<!-- The right_flank contains the sequence for 10 bases to the right of the motif end -->
<!ELEMENT right_flank (#PCDATA)>

<!-- Scanned site elements -->
<!-- Scanned sites are motif occurences found during the sequence scan phase -->
<!ELEMENT scanned_sites_summary (scanned_sites+)>
<!ATTLIST scanned_sites_summary p_thresh CDATA #REQUIRED>
<!ELEMENT scanned_sites (scanned_site*)>
<!ATTLIST scanned_sites sequence_id IDREF #REQUIRED
                        pvalue CDATA #REQUIRED
                        num_sites CDATA #REQUIRED>
<!ELEMENT scanned_site EMPTY>
<!ATTLIST scanned_site  motif_id IDREF #REQUIRED
                        strand (plus|minus|none) 'none'
                        position CDATA #REQUIRED
                        pvalue CDATA #REQUIRED>

<!-- Utility elements -->
<!-- A reference to a letter in the alphabet -->
<!ELEMENT letter_ref EMPTY>
<!ATTLIST letter_ref letter_id IDREF #REQUIRED>
<!-- A alphabet-array contains one floating point value for each letter in an alphabet -->
<!ELEMENT alphabet_array (value+)>
<!ELEMENT value (#PCDATA)>
<!ATTLIST value letter_id IDREF #REQUIRED>

<!-- A alphabet_matrix contains one alphabet_array for each position in a motif -->
<!ELEMENT alphabet_matrix (alphabet_array+)>

]>
<!-- Begin document body -->
<MEME version="4.6.1" release="Mon Mar 21 15:08:38 EST 2011">
<training_set datafile="GATAWeakEnh.radius75bp.fa" length="34">
<alphabet id="nucleotide" length="4">
<letter id="letter_A" symbol="A"/>
<letter id="letter_C" symbol="C"/>
<letter id="letter_G" symbol="G"/>
<letter id="letter_T" symbol="T"/>
</alphabet>
<ambigs>
<letter id="letter_B" symbol="B"/>
<letter id="letter_D" symbol="D"/>
<letter id="letter_H" symbol="H"/>
<letter id="letter_K" symbol="K"/>
<letter id="letter_M" symbol="M"/>
<letter id="letter_N" symbol="N"/>
<letter id="letter_R" symbol="R"/>
<letter id="letter_S" symbol="S"/>
<letter id="letter_U" symbol="U"/>
<letter id="letter_V" symbol="V"/>
<letter id="letter_W" symbol="W"/>
<letter id="letter_Y" symbol="Y"/>
<letter id="letter_star" symbol="*"/>
<letter id="letter_-" symbol="-"/>
<letter id="letter_X" symbol="X"/>
</ambigs>
<sequence id="sequence_0" name="chr10:117106347-117106497" length="150" weight="1.000000" />
<sequence id="sequence_1" name="chr11:78069720-78069870" length="150" weight="1.000000" />
<sequence id="sequence_2" name="chr11:78069792-78069942" length="150" weight="1.000000" />
<sequence id="sequence_3" name="chr12:86800987-86801137" length="150" weight="1.000000" />
<sequence id="sequence_4" name="chr1:86479304-86479454" length="150" weight="1.000000" />
<sequence id="sequence_5" name="chr1:151953775-151953925" length="150" weight="1.000000" />
<sequence id="sequence_6" name="chr2:168050409-168050559" length="150" weight="1.000000" />
<sequence id="sequence_7" name="chr2:27344010-27344160" length="150" weight="1.000000" />
<sequence id="sequence_8" name="chr2:27389674-27389824" length="150" weight="1.000000" />
<sequence id="sequence_9" name="chr4:107008317-107008467" length="150" weight="1.000000" />
<sequence id="sequence_10" name="chr4:155788382-155788532" length="150" weight="1.000000" />
<sequence id="sequence_11" name="chr5:84811644-84811794" length="150" weight="1.000000" />
<sequence id="sequence_12" name="chr6:72279647-72279797" length="150" weight="1.000000" />
<sequence id="sequence_13" name="chr6:88189747-88189897" length="150" weight="1.000000" />
<sequence id="sequence_14" name="chr7:128301163-128301313" length="150" weight="1.000000" />
<sequence id="sequence_15" name="chr7:111179533-111179683" length="150" weight="1.000000" />
<sequence id="sequence_16" name="chr7:127770637-127770787" length="150" weight="1.000000" />
<sequence id="sequence_17" name="chr7:79358627-79358777" length="150" weight="1.000000" />
<sequence id="sequence_18" name="chr7:120980099-120980249" length="150" weight="1.000000" />
<sequence id="sequence_19" name="chr7:126042281-126042431" length="150" weight="1.000000" />
<sequence id="sequence_20" name="chr7:103865818-103865968" length="150" weight="1.000000" />
<sequence id="sequence_21" name="chr7:127091403-127091553" length="150" weight="1.000000" />
<sequence id="sequence_22" name="chr7:125472297-125472447" length="150" weight="1.000000" />
<sequence id="sequence_23" name="chr7:109115127-109115277" length="150" weight="1.000000" />
<sequence id="sequence_24" name="chr7:123366187-123366337" length="150" weight="1.000000" />
<sequence id="sequence_25" name="chr7:125428722-125428872" length="150" weight="1.000000" />
<sequence id="sequence_26" name="chr7:66196788-66196938" length="150" weight="1.000000" />
<sequence id="sequence_27" name="chr7:79742512-79742662" length="150" weight="1.000000" />
<sequence id="sequence_28" name="chr8:80493895-80494045" length="150" weight="1.000000" />
<sequence id="sequence_29" name="chr8:122314990-122315140" length="150" weight="1.000000" />
<sequence id="sequence_30" name="chr8:36283726-36283876" length="150" weight="1.000000" />
<sequence id="sequence_31" name="chr9:45803540-45803690" length="150" weight="1.000000" />
<sequence id="sequence_32" name="chrX:150549776-150549926" length="150" weight="1.000000" />
<sequence id="sequence_33" name="chrX:150564760-150564910" length="150" weight="1.000000" />
<letter_frequencies>
<alphabet_array>
<value letter_id="letter_A">0.256</value>
<value letter_id="letter_C">0.256</value>
<value letter_id="letter_G">0.261</value>
<value letter_id="letter_T">0.227</value>
</alphabet_array>
</letter_frequencies>
</training_set>
<model>
<command_line>meme GATAWeakEnh.radius75bp.fa -maxw 25 -dna -nmotifs 10 -maxsize 200000 -o GATAWeakEnh.radius75bp.meme.maxw25 </command_line>
<host>pongo</host>
<type>zoops</type>
<nmotifs>10</nmotifs>
<evalue_threshold>inf</evalue_threshold>
<object_function>E-value of product of p-values</object_function>
<min_width>8</min_width>
<max_width>25</max_width>
<minic>    0.00</minic>
<wg>11</wg>
<ws>1</ws>
<endgaps>yes</endgaps>
<minsites>2</minsites>
<maxsites>34</maxsites>
<wnsites>0.8</wnsites>
<prob>1</prob>
<spmap>uni</spmap>
<spfuzz>0.5</spfuzz>
<prior>dirichlet</prior>
<beta>0.01</beta>
<maxiter>50</maxiter>
<distance>1e-05</distance>
<num_sequences>34</num_sequences>
<num_positions>5100</num_positions>
<seed>0</seed>
<seqfrac>       1</seqfrac>
<strands>forward</strands>
<priors_file></priors_file>
<reason_for_stopping>Stopped because nmotifs = 10 reached.</reason_for_stopping>
<background_frequencies source="dataset with add-one prior applied">
<alphabet_array>
<value letter_id="letter_A">0.256</value>
<value letter_id="letter_C">0.256</value>
<value letter_id="letter_G">0.261</value>
<value letter_id="letter_T">0.227</value>
</alphabet_array>
</background_frequencies>
</model>
<motifs>
<motif id="motif_1" name="1" width="21" sites="11" ic="20.7" re="20.9" llr="159" e_value="3.9e-003" bayes_threshold="8.19804" elapsed_time="3.244000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">-152</value>
<value letter_id="letter_T">200</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-149</value>
<value letter_id="letter_C">109</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">68</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">50</value>
<value letter_id="letter_C">9</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">68</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">151</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">27</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-50</value>
<value letter_id="letter_C">-49</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">149</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">83</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">126</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-149</value>
<value letter_id="letter_C">-149</value>
<value letter_id="letter_G">80</value>
<value letter_id="letter_T">68</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">9</value>
<value letter_id="letter_C">51</value>
<value letter_id="letter_G">-152</value>
<value letter_id="letter_T">27</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">83</value>
<value letter_id="letter_C">109</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-149</value>
<value letter_id="letter_C">151</value>
<value letter_id="letter_G">-52</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">196</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">-149</value>
<value letter_id="letter_G">106</value>
<value letter_id="letter_T">68</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">50</value>
<value letter_id="letter_C">-149</value>
<value letter_id="letter_G">80</value>
<value letter_id="letter_T">-132</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-50</value>
<value letter_id="letter_C">168</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">109</value>
<value letter_id="letter_C">83</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-149</value>
<value letter_id="letter_C">183</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">131</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">68</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">83</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">106</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">150</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">6</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-149</value>
<value letter_id="letter_C">131</value>
<value letter_id="letter_G">6</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.090909</value>
<value letter_id="letter_T">0.909091</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.090909</value>
<value letter_id="letter_C">0.545455</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.363636</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.363636</value>
<value letter_id="letter_C">0.272727</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.363636</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.727273</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.272727</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.181818</value>
<value letter_id="letter_C">0.181818</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.636364</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.454545</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.545455</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.090909</value>
<value letter_id="letter_C">0.090909</value>
<value letter_id="letter_G">0.454545</value>
<value letter_id="letter_T">0.363636</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.272727</value>
<value letter_id="letter_C">0.363636</value>
<value letter_id="letter_G">0.090909</value>
<value letter_id="letter_T">0.272727</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.454545</value>
<value letter_id="letter_C">0.545455</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.090909</value>
<value letter_id="letter_C">0.727273</value>
<value letter_id="letter_G">0.181818</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.090909</value>
<value letter_id="letter_G">0.545455</value>
<value letter_id="letter_T">0.363636</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.363636</value>
<value letter_id="letter_C">0.090909</value>
<value letter_id="letter_G">0.454545</value>
<value letter_id="letter_T">0.090909</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.181818</value>
<value letter_id="letter_C">0.818182</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.545455</value>
<value letter_id="letter_C">0.454545</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.090909</value>
<value letter_id="letter_C">0.909091</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.636364</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.363636</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.454545</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.545455</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.727273</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.272727</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.090909</value>
<value letter_id="letter_C">0.636364</value>
<value letter_id="letter_G">0.272727</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
T[CT][ATC]T[CT]T[TC][GT][CAT][CA]CA[GT][GA]C[AC]C[AT][GA][AG][CG]
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_2" position="37" strand="plus" pvalue="2.79e-11" >
<left_flank>GGATCCCAGG</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TCTGTTCCTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_1" position="109" strand="plus" pvalue="2.79e-11" >
<left_flank>GGATCCCAGG</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TCTGTTCCTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_17" position="14" strand="plus" pvalue="5.39e-08" >
<left_flank>TGATTACATT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CTAAAGGAAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_20" position="21" strand="plus" pvalue="5.94e-08" >
<left_flank>TTTGTGTCTA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TCCACCCTGA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_32" position="7" strand="plus" pvalue="8.63e-08" >
<left_flank>GGGTTCT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CTCATCCTAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_33" position="5" strand="plus" pvalue="9.45e-08" >
<left_flank>AGTTA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CAAGTAACAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_3" position="21" strand="plus" pvalue="1.03e-07" >
<left_flank>GGGGTAAAAA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>AGATCACACA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_28" position="16" strand="plus" pvalue="2.15e-07" >
<left_flank>CCTCTAGTTA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>TAATGTTGCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_0" position="25" strand="plus" pvalue="5.30e-07" >
<left_flank>ACTGCATTTT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>GCCCTCTGGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_26" position="92" strand="plus" pvalue="1.05e-06" >
<left_flank>CAGAGGCCCC</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TCCCCGCTGT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_8" position="108" strand="plus" pvalue="1.28e-06" >
<left_flank>GCAGAGGCTG</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GTCCTAGAGG</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_2" name="2" width="25" sites="11" ic="22.7" re="22.3" llr="170" e_value="3.6e-001" bayes_threshold="8.95751" elapsed_time="6.220000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">167</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">-152</value>
<value letter_id="letter_T">-132</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">-49</value>
<value letter_id="letter_G">-52</value>
<value letter_id="letter_T">149</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">50</value>
<value letter_id="letter_C">9</value>
<value letter_id="letter_G">6</value>
<value letter_id="letter_T">-132</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-149</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">106</value>
<value letter_id="letter_T">68</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">9</value>
<value letter_id="letter_C">-149</value>
<value letter_id="letter_G">48</value>
<value letter_id="letter_T">27</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">83</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">80</value>
<value letter_id="letter_T">-132</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-149</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">180</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">83</value>
<value letter_id="letter_G">-152</value>
<value letter_id="letter_T">100</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-50</value>
<value letter_id="letter_C">131</value>
<value letter_id="letter_G">-52</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">182</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">-152</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-50</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">165</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-149</value>
<value letter_id="letter_C">109</value>
<value letter_id="letter_G">48</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-50</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">129</value>
<value letter_id="letter_T">-32</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">148</value>
<value letter_id="letter_T">27</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">131</value>
<value letter_id="letter_C">-49</value>
<value letter_id="letter_G">-152</value>
<value letter_id="letter_T">-132</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">83</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">126</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">109</value>
<value letter_id="letter_C">83</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">50</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">129</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-50</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">165</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-50</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">129</value>
<value letter_id="letter_T">-32</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">-149</value>
<value letter_id="letter_G">180</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">131</value>
<value letter_id="letter_C">-149</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">27</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">9</value>
<value letter_id="letter_G">80</value>
<value letter_id="letter_T">27</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">183</value>
<value letter_id="letter_G">-152</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">131</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">68</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.818182</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.090909</value>
<value letter_id="letter_T">0.090909</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.181818</value>
<value letter_id="letter_G">0.181818</value>
<value letter_id="letter_T">0.636364</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.363636</value>
<value letter_id="letter_C">0.272727</value>
<value letter_id="letter_G">0.272727</value>
<value letter_id="letter_T">0.090909</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.090909</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.545455</value>
<value letter_id="letter_T">0.363636</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.272727</value>
<value letter_id="letter_C">0.090909</value>
<value letter_id="letter_G">0.363636</value>
<value letter_id="letter_T">0.272727</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.454545</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.454545</value>
<value letter_id="letter_T">0.090909</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.090909</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.909091</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.454545</value>
<value letter_id="letter_G">0.090909</value>
<value letter_id="letter_T">0.454545</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.181818</value>
<value letter_id="letter_C">0.636364</value>
<value letter_id="letter_G">0.181818</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.909091</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.090909</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.181818</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.818182</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.090909</value>
<value letter_id="letter_C">0.545455</value>
<value letter_id="letter_G">0.363636</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.181818</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.636364</value>
<value letter_id="letter_T">0.181818</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.727273</value>
<value letter_id="letter_T">0.272727</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.636364</value>
<value letter_id="letter_C">0.181818</value>
<value letter_id="letter_G">0.090909</value>
<value letter_id="letter_T">0.090909</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.454545</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.545455</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.545455</value>
<value letter_id="letter_C">0.454545</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.363636</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.636364</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.181818</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.818182</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.181818</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.636364</value>
<value letter_id="letter_T">0.181818</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.090909</value>
<value letter_id="letter_G">0.909091</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.636364</value>
<value letter_id="letter_C">0.090909</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.272727</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.272727</value>
<value letter_id="letter_G">0.454545</value>
<value letter_id="letter_T">0.272727</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.909091</value>
<value letter_id="letter_G">0.090909</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.636364</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.363636</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
AT[ACG][GT][GAT][AG]G[CT]CAG[CG]G[GT]A[TC][AC][GA]GGG[AT][GCT]C[CT]
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_2" position="8" strand="plus" pvalue="4.22e-12" >
<left_flank>CTACCCTG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CAGGTTATCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_1" position="80" strand="plus" pvalue="4.22e-12" >
<left_flank>TGCTACCCTG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CAGGTTATCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_0" position="113" strand="plus" pvalue="1.42e-09" >
<left_flank>GTTTTAACAG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CCCCCAAGTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="95" strand="plus" pvalue="1.44e-08" >
<left_flank>TAGCGTCAAG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>TGGGGACATG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_20" position="76" strand="plus" pvalue="2.27e-08" >
<left_flank>ATGGTCATCT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TTCTTGATAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_28" position="65" strand="plus" pvalue="4.86e-08" >
<left_flank>ATGCTAGCCA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>GGGAAGGTGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_21" position="51" strand="plus" pvalue="1.21e-07" >
<left_flank>GAAATCCAAG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GAGGGGTGCG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_16" position="13" strand="plus" pvalue="2.71e-07" >
<left_flank>GGAAGCTGCT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>AGCAGATAAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_23" position="7" strand="plus" pvalue="3.26e-07" >
<left_flank>GGAGGCA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GCCCCAGCTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_18" position="68" strand="plus" pvalue="4.94e-07" >
<left_flank>TGACACCTTC</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>ACACATAGCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_6" position="90" strand="plus" pvalue="5.85e-07" >
<left_flank>GTGTCAGGGT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CGGAAGCCTC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_3" name="3" width="11" sites="10" ic="15.0" re="15.1" llr="105" e_value="1.8e+001" bayes_threshold="9.14381" elapsed_time="8.920000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">-35</value>
<value letter_id="letter_G">-997</value>
<value letter_id="letter_T">182</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">197</value>
<value letter_id="letter_G">-997</value>
<value letter_id="letter_T">-997</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">197</value>
<value letter_id="letter_G">-997</value>
<value letter_id="letter_T">-997</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">-997</value>
<value letter_id="letter_G">-997</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">-997</value>
<value letter_id="letter_G">120</value>
<value letter_id="letter_T">82</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">23</value>
<value letter_id="letter_C">145</value>
<value letter_id="letter_G">-997</value>
<value letter_id="letter_T">-997</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">-997</value>
<value letter_id="letter_G">20</value>
<value letter_id="letter_T">162</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">197</value>
<value letter_id="letter_G">-997</value>
<value letter_id="letter_T">-997</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-36</value>
<value letter_id="letter_C">164</value>
<value letter_id="letter_G">-997</value>
<value letter_id="letter_T">-997</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-36</value>
<value letter_id="letter_C">-35</value>
<value letter_id="letter_G">20</value>
<value letter_id="letter_T">40</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">145</value>
<value letter_id="letter_G">20</value>
<value letter_id="letter_T">-997</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.800000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.600000</value>
<value letter_id="letter_T">0.400000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.300000</value>
<value letter_id="letter_C">0.700000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.300000</value>
<value letter_id="letter_T">0.700000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.800000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.200000</value>
<value letter_id="letter_G">0.300000</value>
<value letter_id="letter_T">0.300000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.700000</value>
<value letter_id="letter_G">0.300000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[TC]CCT[GT][CA][TG]C[CA][GTACA][CG]
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_29" position="131" strand="plus" pvalue="7.84e-07" >
<left_flank>TCAAGTCACT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CCTCCCAC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_2" position="63" strand="plus" pvalue="1.22e-06" >
<left_flank>CAGACTCTGT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>ACCCTGATTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_1" position="135" strand="plus" pvalue="1.22e-06" >
<left_flank>CAGACTCTGT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>ACCC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_24" position="134" strand="plus" pvalue="3.02e-06" >
<left_flank>AACTTCACAC</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CTGTC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_12" position="10" strand="plus" pvalue="3.87e-06" >
<left_flank>TTCTGATACT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CTGAGTGCTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_33" position="42" strand="plus" pvalue="1.40e-05" >
<left_flank>ACAGTCCCCA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CCTATCTAGT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_17" position="118" strand="plus" pvalue="1.57e-05" >
<left_flank>AGTGCTTCTG</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>AGAAAGGCCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_7" position="45" strand="plus" pvalue="1.99e-05" >
<left_flank>CAGCAAACTC</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CACCACCATT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_6" position="134" strand="plus" pvalue="2.61e-05" >
<left_flank>CCAGCCCCGG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CGGAT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_9" position="27" strand="plus" pvalue="2.90e-05" >
<left_flank>CACAACTCAC</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CTCATTCCCC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_4" name="4" width="10" sites="34" ic="9.3" re="9.1" llr="214" e_value="2.6e+001" bayes_threshold="7.19931" elapsed_time="11.688000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">133</value>
<value letter_id="letter_C">5</value>
<value letter_id="letter_G">-1173</value>
<value letter_id="letter_T">-136</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">120</value>
<value letter_id="letter_C">-1173</value>
<value letter_id="letter_G">66</value>
<value letter_id="letter_T">-1173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">20</value>
<value letter_id="letter_C">-1173</value>
<value letter_id="letter_G">144</value>
<value letter_id="letter_T">-1173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-312</value>
<value letter_id="letter_C">179</value>
<value letter_id="letter_G">-156</value>
<value letter_id="letter_T">-1173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-212</value>
<value letter_id="letter_C">-1173</value>
<value letter_id="letter_G">-1173</value>
<value letter_id="letter_T">205</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1173</value>
<value letter_id="letter_C">-12</value>
<value letter_id="letter_G">155</value>
<value letter_id="letter_T">-1173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-212</value>
<value letter_id="letter_C">20</value>
<value letter_id="letter_G">44</value>
<value letter_id="letter_T">37</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">68</value>
<value letter_id="letter_C">-53</value>
<value letter_id="letter_G">-15</value>
<value letter_id="letter_T">-36</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">112</value>
<value letter_id="letter_C">-1173</value>
<value letter_id="letter_G">76</value>
<value letter_id="letter_T">-1173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-212</value>
<value letter_id="letter_C">58</value>
<value letter_id="letter_G">110</value>
<value letter_id="letter_T">-1173</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.647059</value>
<value letter_id="letter_C">0.264706</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.088235</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.588235</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.411765</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.294118</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.705882</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.029412</value>
<value letter_id="letter_C">0.882353</value>
<value letter_id="letter_G">0.088235</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.058824</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.941176</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.235294</value>
<value letter_id="letter_G">0.764706</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.058824</value>
<value letter_id="letter_C">0.294118</value>
<value letter_id="letter_G">0.352941</value>
<value letter_id="letter_T">0.294118</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.411765</value>
<value letter_id="letter_C">0.176471</value>
<value letter_id="letter_G">0.235294</value>
<value letter_id="letter_T">0.176471</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.558824</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.441176</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.058824</value>
<value letter_id="letter_C">0.382353</value>
<value letter_id="letter_G">0.558824</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[AC][AG][GA]CT[GC][GCT][AG][AG][GC]
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_19" position="58" strand="plus" pvalue="5.51e-06" >
<left_flank>TATCAGCAGT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CTTGTCTCCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_0" position="93" strand="plus" pvalue="6.67e-06" >
<left_flank>CACACGTGGC</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GTTTTAACAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_30" position="91" strand="plus" pvalue="1.10e-05" >
<left_flank>CATGAGATGC</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>GTGAGATAAC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_25" position="47" strand="plus" pvalue="1.99e-05" >
<left_flank>TAGAATCACA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>AGAAGCCACT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_3" position="80" strand="plus" pvalue="5.13e-05" >
<left_flank>AATCCCGGGG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CACGGTAAAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_17" position="61" strand="plus" pvalue="6.42e-05" >
<left_flank>TTCCTCGCCC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>AGCAGATAAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_16" position="54" strand="plus" pvalue="7.73e-05" >
<left_flank>TAAGTCTGAT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TGTGGGAGGA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_27" position="95" strand="plus" pvalue="9.44e-05" >
<left_flank>GCTACAAAAG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TTTCTCTGGA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_5" position="68" strand="plus" pvalue="9.44e-05" >
<left_flank>GGAGAAGCCG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GGGAATGGTT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_32" position="63" strand="plus" pvalue="1.10e-04" >
<left_flank>TAATGGTGAT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GGCTTTATCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_1" position="66" strand="plus" pvalue="1.49e-04" >
<left_flank>AGCACGTGCT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CCTGATAGTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_23" position="66" strand="plus" pvalue="2.13e-04" >
<left_flank>TGTTTGGGGA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TCCGATAAGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_33" position="112" strand="plus" pvalue="2.42e-04" >
<left_flank>CACAGAAGCA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>ATGGACAGGA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_31" position="39" strand="plus" pvalue="2.71e-04" >
<left_flank>GCAGATGCTG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CCACATGAAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_26" position="123" strand="plus" pvalue="3.06e-04" >
<left_flank>TCCCCGCTGT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GTATAGATAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_14" position="126" strand="plus" pvalue="3.06e-04" >
<left_flank>AGGATGAAAT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TTTTAATGAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_22" position="97" strand="plus" pvalue="5.45e-04" >
<left_flank>GCTCAAAGAT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>AGATGGTGTA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_12" position="85" strand="plus" pvalue="5.45e-04" >
<left_flank>ATTACACCTA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GCAAGCACTT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_9" position="85" strand="plus" pvalue="5.45e-04" >
<left_flank>GACTGGGGTG</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TGGGGAAGCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_20" position="108" strand="plus" pvalue="5.92e-04" >
<left_flank>CCCTTCTTGA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CTAGCATCAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_28" position="137" strand="plus" pvalue="6.96e-04" >
<left_flank>GGCCTTCCTA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>ACA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_2" position="128" strand="plus" pvalue="6.96e-04" >
<left_flank>ACAGGCTCTC</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>AGATATCTCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_24" position="68" strand="plus" pvalue="8.89e-04" >
<left_flank>ACAACTCCTG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GGCAGACTCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_13" position="43" strand="plus" pvalue="8.89e-04" >
<left_flank>GCTGTATAAT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GAGATAGGAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_7" position="6" strand="plus" pvalue="8.89e-04" >
<left_flank>ATCAAT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TGCTCAGACC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_11" position="114" strand="plus" pvalue="9.60e-04" >
<left_flank>ATGGCATATT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TGAATTAATC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_10" position="8" strand="plus" pvalue="9.60e-04" >
<left_flank>ACACATTC</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>ATTGTTCCAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_6" position="45" strand="plus" pvalue="1.18e-03" >
<left_flank>CGGCTGTTCC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CGCTGCGATA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_29" position="2" strand="plus" pvalue="1.35e-03" >
<left_flank>TG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CCGAGAGGGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_21" position="90" strand="plus" pvalue="1.63e-03" >
<left_flank>GGTGCGGAAG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>TGGGGGACTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_18" position="52" strand="plus" pvalue="1.98e-03" >
<left_flank>GTTAGACTTG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>ACCTTCATCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="13" strand="plus" pvalue="2.22e-03" >
<left_flank>TGATAAGGTA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GCCTCTTCTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_8" position="84" strand="plus" pvalue="2.89e-03" >
<left_flank>CACCCCTGGA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>ACAGGCAGAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_4" position="69" strand="plus" pvalue="3.21e-03" >
<left_flank>TGTCCTTGGG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TTGCAGGTTA</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_5" name="5" width="17" sites="5" ic="23.6" re="24.4" llr="84" e_value="3.1e+001" bayes_threshold="10.7742" elapsed_time="14.060000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-36</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">182</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-36</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">161</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">64</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">140</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-36</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">182</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-36</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-38</value>
<value letter_id="letter_T">140</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">122</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">62</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">64</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">120</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-36</value>
<value letter_id="letter_C">64</value>
<value letter_id="letter_G">62</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">64</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">140</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">164</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">-18</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-36</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">182</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">-897</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">194</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-897</value>
<value letter_id="letter_C">-897</value>
<value letter_id="letter_G">194</value>
<value letter_id="letter_T">-897</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.800000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.800000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.600000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.800000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.200000</value>
<value letter_id="letter_T">0.600000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.600000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.400000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.400000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.600000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.400000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.600000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.800000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.200000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.200000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.800000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[TA][GA][TC]T[TA][TAG][AG][GA][CGA][TC]TT[CT][TA]TGG
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_22" position="33" strand="plus" pvalue="1.71e-10" >
<left_flank>CCAACAGAAA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GCCAATGCCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_10" position="32" strand="plus" pvalue="2.50e-09" >
<left_flank>TTCCAGGAAT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TTTCAAAGGA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_32" position="107" strand="plus" pvalue="7.69e-09" >
<left_flank>CAGCCTTGAG</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CCAGGCAGTC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_23" position="130" strand="plus" pvalue="4.07e-08" >
<left_flank>GCCTCTCGGC</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GTC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_31" position="96" strand="plus" pvalue="6.68e-08" >
<left_flank>AAACCCCAGC</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TGCTTAAAAC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_6" name="6" width="8" sites="9" ic="14.0" re="13.9" llr="87" e_value="7.4e+001" bayes_threshold="9.92392" elapsed_time="16.244000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-982</value>
<value letter_id="letter_C">197</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">111</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">97</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-982</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">194</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">196</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-982</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">179</value>
<value letter_id="letter_C">-120</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">196</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-120</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">177</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.555556</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.444444</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.888889</value>
<value letter_id="letter_C">0.111111</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.111111</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.888889</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
C[AT]GATAAG
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_17" position="73" strand="plus" pvalue="1.70e-05" >
<left_flank>GCTGCAAGAG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>ATTGCAGAGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_16" position="40" strand="plus" pvalue="1.70e-05" >
<left_flank>AGGGAGCTAG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TCTGATAAAC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_11" position="78" strand="plus" pvalue="1.70e-05" >
<left_flank>TTTGTCGGCA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CCTATTGCAT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_31" position="122" strand="plus" pvalue="3.21e-05" >
<left_flank>GTGCTTAAAA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TCAAGAAAAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_23" position="39" strand="plus" pvalue="3.21e-05" >
<left_flank>GCTGCCCCAG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GACGGGTATT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="2" strand="plus" pvalue="3.21e-05" >
<left_flank>CT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GTACGGGTGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_1" position="50" strand="plus" pvalue="3.21e-05" >
<left_flank>CCCTGCAGGC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CACGTGCTAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_9" position="62" strand="plus" pvalue="6.58e-05" >
<left_flank>GATCCTCTCC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>GGCAGGACTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_3" position="56" strand="plus" pvalue="6.58e-05" >
<left_flank>CACACACTCA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CAACCAAATC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_7" name="7" width="25" sites="3" ic="37.0" re="37.6" llr="78" e_value="1.5e+003" bayes_threshold="10.9265" elapsed_time="18.396000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">196</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">-823</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">38</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">155</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">138</value>
<value letter_id="letter_G">35</value>
<value letter_id="letter_T">-823</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">38</value>
<value letter_id="letter_C">38</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">55</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">-823</value>
<value letter_id="letter_G">193</value>
<value letter_id="letter_T">-823</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">-823</value>
<value letter_id="letter_G">35</value>
<value letter_id="letter_T">155</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">-823</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">138</value>
<value letter_id="letter_G">35</value>
<value letter_id="letter_T">-823</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">-823</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">-823</value>
<value letter_id="letter_G">193</value>
<value letter_id="letter_T">-823</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">-823</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">38</value>
<value letter_id="letter_C">-823</value>
<value letter_id="letter_G">35</value>
<value letter_id="letter_T">55</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">138</value>
<value letter_id="letter_C">38</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">-823</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">196</value>
<value letter_id="letter_C">-823</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">-823</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">138</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">55</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">-823</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">138</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">55</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">196</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">-823</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">38</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">155</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">-823</value>
<value letter_id="letter_G">193</value>
<value letter_id="letter_T">-823</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">196</value>
<value letter_id="letter_C">-823</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">-823</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">-823</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">38</value>
<value letter_id="letter_C">-823</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">155</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">38</value>
<value letter_id="letter_C">38</value>
<value letter_id="letter_G">35</value>
<value letter_id="letter_T">-823</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-823</value>
<value letter_id="letter_C">196</value>
<value letter_id="letter_G">-823</value>
<value letter_id="letter_T">-823</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.666667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.666667</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.333333</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.333333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.666667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.666667</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.333333</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.333333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.666667</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.666667</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.333333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.666667</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.333333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.666667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.333333</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.666667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.333333</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
C[TC][CG][ACT]G[TG]T[CG]TGT[AGT][AC]A[CT]T[CT]C[TC]GAT[TA][ACG]C
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_14" position="3" strand="plus" pvalue="6.98e-14" >
<left_flank>CAG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TGAGGACTGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_12" position="55" strand="plus" pvalue="2.11e-12" >
<left_flank>TGCTGCCACG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>ACCTACGGCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="64" strand="plus" pvalue="4.35e-12" >
<left_flank>AGAGAGCATC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>GTCAAGATGG</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_8" name="8" width="20" sites="6" ic="24.2" re="24.2" llr="100" e_value="2.9e+003" bayes_threshold="9.98196" elapsed_time="20.476000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-62</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">188</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-62</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">35</value>
<value letter_id="letter_T">114</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">38</value>
<value letter_id="letter_G">35</value>
<value letter_id="letter_T">55</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">170</value>
<value letter_id="letter_G">-65</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">170</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">-44</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">38</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">135</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">196</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">94</value>
<value letter_id="letter_T">114</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">135</value>
<value letter_id="letter_T">55</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">138</value>
<value letter_id="letter_C">-62</value>
<value letter_id="letter_G">-65</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">170</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">-44</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-62</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">135</value>
<value letter_id="letter_T">-44</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">194</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">138</value>
<value letter_id="letter_G">35</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-62</value>
<value letter_id="letter_C">170</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-62</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">188</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">94</value>
<value letter_id="letter_T">114</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-923</value>
<value letter_id="letter_C">197</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">170</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">-923</value>
<value letter_id="letter_T">-44</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">38</value>
<value letter_id="letter_C">-923</value>
<value letter_id="letter_G">135</value>
<value letter_id="letter_T">-923</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.166667</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.833333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.166667</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.333333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.833333</value>
<value letter_id="letter_G">0.166667</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.833333</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.166667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.333333</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.666667</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.666667</value>
<value letter_id="letter_T">0.333333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.666667</value>
<value letter_id="letter_C">0.166667</value>
<value letter_id="letter_G">0.166667</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.833333</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.166667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.166667</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.666667</value>
<value letter_id="letter_T">0.166667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.666667</value>
<value letter_id="letter_G">0.333333</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.166667</value>
<value letter_id="letter_C">0.833333</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.166667</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.833333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.833333</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.166667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.333333</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.666667</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
T[TG][CGT]CA[GA]A[GT][GT]AAGG[CG]CT[GT]CA[GA]
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_10" position="49" strand="plus" pvalue="7.32e-10" >
<left_flank>GGCTTTTTGG</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>TATGCTTGTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_17" position="82" strand="plus" pvalue="1.05e-09" >
<left_flank>GCAGATAAGA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CCGTACAGTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_16" position="124" strand="plus" pvalue="6.98e-09" >
<left_flank>GAACTGAAGA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>ATGTGT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_9" position="100" strand="plus" pvalue="1.49e-08" >
<left_flank>GTAACTGGGG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TATTTGTGAT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_24" position="37" strand="plus" pvalue="4.75e-08" >
<left_flank>GACCTTGACT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>AACAACTCCT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_11" position="10" strand="plus" pvalue="5.68e-08" >
<left_flank>GTTGAAAATA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>CTATTATCTC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_9" name="9" width="8" sites="10" ic="12.5" re="12.7" llr="88" e_value="4.3e+003" bayes_threshold="9.86728" elapsed_time="22.580000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">97</value>
<value letter_id="letter_G">94</value>
<value letter_id="letter_T">-997</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">23</value>
<value letter_id="letter_C">65</value>
<value letter_id="letter_G">-997</value>
<value letter_id="letter_T">40</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">-997</value>
<value letter_id="letter_G">-997</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">196</value>
<value letter_id="letter_C">-997</value>
<value letter_id="letter_G">-997</value>
<value letter_id="letter_T">-997</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">-997</value>
<value letter_id="letter_G">-997</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">197</value>
<value letter_id="letter_G">-997</value>
<value letter_id="letter_T">-997</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">-997</value>
<value letter_id="letter_G">-997</value>
<value letter_id="letter_T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-997</value>
<value letter_id="letter_C">65</value>
<value letter_id="letter_G">120</value>
<value letter_id="letter_T">-997</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.300000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.300000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.400000</value>
<value letter_id="letter_G">0.600000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[CG][CAT]TATCT[GC]
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_13" position="74" strand="plus" pvalue="2.65e-05" >
<left_flank>ATGGCCGCGC</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CGTCGCCATG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_7" position="142" strand="plus" pvalue="2.65e-05" >
<left_flank>CGGAAACTCA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank></right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_6" position="68" strand="plus" pvalue="5.00e-05" >
<left_flank>TGCGATAGAG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GCGGGTGTCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_4" position="53" strand="plus" pvalue="5.00e-05" >
<left_flank>ATTTCAGGAA</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TCCTTGGGCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_33" position="89" strand="plus" pvalue="1.02e-04" >
<left_flank>ATGTGACAGT</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>AGAACCACAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_29" position="99" strand="plus" pvalue="1.02e-04" >
<left_flank>GCCAGGGCAG</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>GGTGGCGGCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_14" position="87" strand="plus" pvalue="1.02e-04" >
<left_flank>CCCAAGCCAC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>ACCCCACACA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_5" position="98" strand="plus" pvalue="1.02e-04" >
<left_flank>ACAGCCTCAG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CCTGCAGGCC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_22" position="142" strand="plus" pvalue="1.25e-04" >
<left_flank>GGACAAGATT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank></right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_2" position="139" strand="plus" pvalue="1.51e-04" >
<left_flank>GGCTGGTAGA</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TGC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_10" name="10" width="13" sites="2" ic="24.0" re="24.7" llr="34" e_value="4.8e+003" bayes_threshold="11.1954" elapsed_time="24.604000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">213</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">213</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">213</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">213</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">193</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">213</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">96</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">114</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">213</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">196</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">96</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">114</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">196</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">196</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">196</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
TTTTGT[AT]TA[CT]CAC
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_18" position="112" strand="plus" pvalue="2.57e-08" >
<left_flank>ACCAAACGTA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TCAGTAGACC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_0" position="73" strand="plus" pvalue="2.57e-08" >
<left_flank>CCACTTTGCC</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>ACGTGGCAAG</right_flank>
</contributing_site>
</contributing_sites>
</motif>
</motifs>
<scanned_sites_summary p_thresh="0.0001">
<scanned_sites sequence_id="sequence_0" pvalue="2.50e-12" num_sites="4"><scanned_site motif_id="motif_1" strand="plus" position="25" pvalue="5.30e-07"/>
<scanned_site motif_id="motif_10" strand="plus" position="73" pvalue="2.57e-08"/>
<scanned_site motif_id="motif_4" strand="plus" position="93" pvalue="6.67e-06"/>
<scanned_site motif_id="motif_2" strand="plus" position="113" pvalue="1.42e-09"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_1" pvalue="1.61e-20" num_sites="4"><scanned_site motif_id="motif_6" strand="plus" position="50" pvalue="3.21e-05"/>
<scanned_site motif_id="motif_2" strand="plus" position="80" pvalue="4.22e-12"/>
<scanned_site motif_id="motif_1" strand="plus" position="109" pvalue="2.79e-11"/>
<scanned_site motif_id="motif_3" strand="plus" position="135" pvalue="1.22e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_2" pvalue="4.17e-16" num_sites="3"><scanned_site motif_id="motif_2" strand="plus" position="8" pvalue="4.22e-12"/>
<scanned_site motif_id="motif_1" strand="plus" position="37" pvalue="2.79e-11"/>
<scanned_site motif_id="motif_3" strand="plus" position="63" pvalue="1.22e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_3" pvalue="2.82e-05" num_sites="3"><scanned_site motif_id="motif_1" strand="plus" position="21" pvalue="1.03e-07"/>
<scanned_site motif_id="motif_6" strand="plus" position="56" pvalue="6.58e-05"/>
<scanned_site motif_id="motif_4" strand="plus" position="80" pvalue="5.13e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_4" pvalue="1.68e-01" num_sites="1"><scanned_site motif_id="motif_9" strand="plus" position="53" pvalue="5.00e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_5" pvalue="1.25e-01" num_sites="1"><scanned_site motif_id="motif_4" strand="plus" position="68" pvalue="9.44e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_6" pvalue="8.24e-05" num_sites="3"><scanned_site motif_id="motif_9" strand="plus" position="68" pvalue="5.00e-05"/>
<scanned_site motif_id="motif_2" strand="plus" position="90" pvalue="5.85e-07"/>
<scanned_site motif_id="motif_3" strand="plus" position="134" pvalue="2.61e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_7" pvalue="4.26e-03" num_sites="2"><scanned_site motif_id="motif_3" strand="plus" position="45" pvalue="1.99e-05"/>
<scanned_site motif_id="motif_9" strand="plus" position="142" pvalue="2.65e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_8" pvalue="3.40e-02" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="108" pvalue="1.28e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_9" pvalue="3.03e-06" num_sites="3"><scanned_site motif_id="motif_3" strand="plus" position="27" pvalue="2.90e-05"/>
<scanned_site motif_id="motif_6" strand="plus" position="62" pvalue="6.58e-05"/>
<scanned_site motif_id="motif_8" strand="plus" position="100" pvalue="1.49e-08"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_10" pvalue="2.61e-08" num_sites="2"><scanned_site motif_id="motif_5" strand="plus" position="32" pvalue="2.50e-09"/>
<scanned_site motif_id="motif_8" strand="plus" position="49" pvalue="7.32e-10"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_11" pvalue="5.87e-05" num_sites="2"><scanned_site motif_id="motif_8" strand="plus" position="10" pvalue="5.68e-08"/>
<scanned_site motif_id="motif_6" strand="plus" position="78" pvalue="1.70e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_12" pvalue="2.60e-08" num_sites="2"><scanned_site motif_id="motif_3" strand="plus" position="10" pvalue="3.87e-06"/>
<scanned_site motif_id="motif_7" strand="plus" position="55" pvalue="2.11e-12"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_13" pvalue="9.61e-02" num_sites="1"><scanned_site motif_id="motif_9" strand="plus" position="74" pvalue="2.65e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_14" pvalue="1.04e-08" num_sites="1"><scanned_site motif_id="motif_7" strand="plus" position="3" pvalue="6.98e-14"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_15" pvalue="2.48e-12" num_sites="3"><scanned_site motif_id="motif_6" strand="plus" position="2" pvalue="3.21e-05"/>
<scanned_site motif_id="motif_7" strand="plus" position="64" pvalue="4.35e-12"/>
<scanned_site motif_id="motif_2" strand="plus" position="95" pvalue="1.44e-08"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_16" pvalue="1.25e-08" num_sites="4"><scanned_site motif_id="motif_2" strand="plus" position="13" pvalue="2.71e-07"/>
<scanned_site motif_id="motif_6" strand="plus" position="40" pvalue="1.70e-05"/>
<scanned_site motif_id="motif_4" strand="plus" position="54" pvalue="7.73e-05"/>
<scanned_site motif_id="motif_8" strand="plus" position="124" pvalue="6.98e-09"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_17" pvalue="1.69e-11" num_sites="5"><scanned_site motif_id="motif_1" strand="plus" position="14" pvalue="5.39e-08"/>
<scanned_site motif_id="motif_4" strand="plus" position="61" pvalue="6.42e-05"/>
<scanned_site motif_id="motif_6" strand="plus" position="73" pvalue="1.70e-05"/>
<scanned_site motif_id="motif_8" strand="plus" position="82" pvalue="1.05e-09"/>
<scanned_site motif_id="motif_3" strand="plus" position="118" pvalue="1.57e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_18" pvalue="6.46e-07" num_sites="2"><scanned_site motif_id="motif_2" strand="plus" position="68" pvalue="4.94e-07"/>
<scanned_site motif_id="motif_10" strand="plus" position="112" pvalue="2.57e-08"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_19" pvalue="3.57e-02" num_sites="1"><scanned_site motif_id="motif_4" strand="plus" position="58" pvalue="5.51e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_20" pvalue="5.55e-09" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="21" pvalue="5.94e-08"/>
<scanned_site motif_id="motif_2" strand="plus" position="76" pvalue="2.27e-08"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_21" pvalue="4.35e-02" num_sites="1"><scanned_site motif_id="motif_2" strand="plus" position="51" pvalue="1.21e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_22" pvalue="9.16e-07" num_sites="1"><scanned_site motif_id="motif_5" strand="plus" position="33" pvalue="1.71e-10"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_23" pvalue="1.86e-08" num_sites="3"><scanned_site motif_id="motif_2" strand="plus" position="7" pvalue="3.26e-07"/>
<scanned_site motif_id="motif_6" strand="plus" position="39" pvalue="3.21e-05"/>
<scanned_site motif_id="motif_5" strand="plus" position="130" pvalue="4.07e-08"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_24" pvalue="9.52e-06" num_sites="2"><scanned_site motif_id="motif_8" strand="plus" position="37" pvalue="4.75e-08"/>
<scanned_site motif_id="motif_3" strand="plus" position="134" pvalue="3.02e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_25" pvalue="2.60e-01" num_sites="1"><scanned_site motif_id="motif_4" strand="plus" position="47" pvalue="1.99e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_26" pvalue="3.36e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="92" pvalue="1.05e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_27" pvalue="1.91e-02" num_sites="1"><scanned_site motif_id="motif_4" strand="plus" position="95" pvalue="9.44e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_28" pvalue="1.43e-06" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="16" pvalue="2.15e-07"/>
<scanned_site motif_id="motif_2" strand="plus" position="65" pvalue="4.86e-08"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_29" pvalue="6.35e-03" num_sites="1"><scanned_site motif_id="motif_3" strand="plus" position="131" pvalue="7.84e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_30" pvalue="2.46e-01" num_sites="1"><scanned_site motif_id="motif_4" strand="plus" position="91" pvalue="1.10e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_31" pvalue="5.00e-06" num_sites="2"><scanned_site motif_id="motif_5" strand="plus" position="96" pvalue="6.68e-08"/>
<scanned_site motif_id="motif_6" strand="plus" position="122" pvalue="3.21e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_32" pvalue="2.24e-09" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="7" pvalue="8.63e-08"/>
<scanned_site motif_id="motif_5" strand="plus" position="107" pvalue="7.69e-09"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_33" pvalue="7.44e-05" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="5" pvalue="9.45e-08"/>
<scanned_site motif_id="motif_3" strand="plus" position="42" pvalue="1.40e-05"/>
</scanned_sites>
</scanned_sites_summary>
</MEME>
