<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<!-- Document definition -->
<!DOCTYPE MEME[
<!ELEMENT MEME (
  training_set,
  model, 
  motifs, 
  scanned_sites_summary?
)>
<!ATTLIST MEME 
  version CDATA #REQUIRED
  release CDATA #REQUIRED
>
<!-- Training-set elements -->
<!ELEMENT training_set (alphabet, ambigs, sequence+, letter_frequencies)>
<!ATTLIST training_set datafile CDATA #REQUIRED length CDATA #REQUIRED>
<!ELEMENT alphabet (letter+)>
<!ATTLIST alphabet id (amino-acid|nucleotide) #REQUIRED
                   length CDATA #REQUIRED>
<!ELEMENT ambigs (letter+)>
<!ELEMENT letter EMPTY>
<!ATTLIST letter id ID #REQUIRED>
<!ATTLIST letter symbol CDATA #REQUIRED>
<!ELEMENT sequence EMPTY>
<!ATTLIST sequence id ID #REQUIRED
                   name CDATA #REQUIRED
                   length CDATA #REQUIRED
                   weight CDATA #REQUIRED
>
<!ELEMENT letter_frequencies (alphabet_array)>

<!-- Model elements -->
<!ELEMENT model (
  command_line,
  host,
  type,
  nmotifs,
  evalue_threshold,
  object_function,
  min_width,
  max_width,
  minic,
  wg,
  ws,
  endgaps,
  minsites,
  maxsites,
  wnsites,
  prob,
  spmap,
  spfuzz,
  prior,
  beta,
  maxiter,
  distance,
  num_sequences,
  num_positions,
  seed,
  seqfrac,
  strands,
  priors_file,
  reason_for_stopping,
  background_frequencies
)>
<!ELEMENT command_line (#PCDATA)*>
<!ELEMENT host (#PCDATA)*>
<!ELEMENT type (#PCDATA)*>
<!ELEMENT nmotifs (#PCDATA)*>
<!ELEMENT evalue_threshold (#PCDATA)*>
<!ELEMENT object_function (#PCDATA)*>
<!ELEMENT min_width (#PCDATA)*>
<!ELEMENT max_width (#PCDATA)*>
<!ELEMENT minic (#PCDATA)*>
<!ELEMENT wg (#PCDATA)*>
<!ELEMENT ws (#PCDATA)*>
<!ELEMENT endgaps (#PCDATA)*>
<!ELEMENT minsites (#PCDATA)*>
<!ELEMENT maxsites (#PCDATA)*>
<!ELEMENT wnsites (#PCDATA)*>
<!ELEMENT prob (#PCDATA)*>
<!ELEMENT spmap (#PCDATA)*>
<!ELEMENT spfuzz (#PCDATA)*>
<!ELEMENT prior (#PCDATA)*>
<!ELEMENT beta (#PCDATA)*>
<!ELEMENT maxiter (#PCDATA)*>
<!ELEMENT distance (#PCDATA)*>
<!ELEMENT num_sequences (#PCDATA)*>
<!ELEMENT num_positions (#PCDATA)*>
<!ELEMENT seed (#PCDATA)*>
<!ELEMENT seqfrac (#PCDATA)*>
<!ELEMENT strands (#PCDATA)*>
<!ELEMENT priors_file (#PCDATA)*>
<!ELEMENT reason_for_stopping (#PCDATA)*>
<!ELEMENT background_frequencies (alphabet_array)>
<!ATTLIST background_frequencies source CDATA #REQUIRED>

<!-- Motif elements -->
<!ELEMENT motifs (motif+)>
<!ELEMENT motif (scores, probabilities, regular_expression?, contributing_sites)>
<!ATTLIST motif id ID #REQUIRED
                name CDATA #REQUIRED
                width CDATA #REQUIRED
                sites CDATA #REQUIRED
                llr CDATA #REQUIRED
                ic CDATA #REQUIRED
                re CDATA #REQUIRED
                bayes_threshold CDATA #REQUIRED
                e_value CDATA #REQUIRED
                elapsed_time CDATA #REQUIRED
                url CDATA ""
>
<!ELEMENT scores (alphabet_matrix)>
<!ELEMENT probabilities (alphabet_matrix)>
<!ELEMENT regular_expression (#PCDATA)*>

<!-- Contributing site elements -->
<!-- Contributing sites are motif occurences found during the motif discovery phase -->
<!ELEMENT contributing_sites (contributing_site+)>
<!ELEMENT contributing_site (left_flank, site, right_flank)>
<!ATTLIST contributing_site sequence_id IDREF #REQUIRED
                          position CDATA #REQUIRED
                          strand (plus|minus|none) 'none'
                          pvalue CDATA #REQUIRED
>
<!-- The left_flank contains the sequence for 10 bases to the left of the motif start -->
<!ELEMENT left_flank (#PCDATA)>
<!-- The site contains the sequence for the motif instance -->
<!ELEMENT site (letter_ref+)>
<!-- The right_flank contains the sequence for 10 bases to the right of the motif end -->
<!ELEMENT right_flank (#PCDATA)>

<!-- Scanned site elements -->
<!-- Scanned sites are motif occurences found during the sequence scan phase -->
<!ELEMENT scanned_sites_summary (scanned_sites+)>
<!ATTLIST scanned_sites_summary p_thresh CDATA #REQUIRED>
<!ELEMENT scanned_sites (scanned_site*)>
<!ATTLIST scanned_sites sequence_id IDREF #REQUIRED
                        pvalue CDATA #REQUIRED
                        num_sites CDATA #REQUIRED>
<!ELEMENT scanned_site EMPTY>
<!ATTLIST scanned_site  motif_id IDREF #REQUIRED
                        strand (plus|minus|none) 'none'
                        position CDATA #REQUIRED
                        pvalue CDATA #REQUIRED>

<!-- Utility elements -->
<!-- A reference to a letter in the alphabet -->
<!ELEMENT letter_ref EMPTY>
<!ATTLIST letter_ref letter_id IDREF #REQUIRED>
<!-- A alphabet-array contains one floating point value for each letter in an alphabet -->
<!ELEMENT alphabet_array (value+)>
<!ELEMENT value (#PCDATA)>
<!ATTLIST value letter_id IDREF #REQUIRED>

<!-- A alphabet_matrix contains one alphabet_array for each position in a motif -->
<!ELEMENT alphabet_matrix (alphabet_array+)>

]>
<!-- Begin document body -->
<MEME version="4.6.1" release="Mon Mar 21 15:08:38 EST 2011">
<training_set datafile="GATATopEnh.radius25bp.fa" length="20">
<alphabet id="nucleotide" length="4">
<letter id="letter_A" symbol="A"/>
<letter id="letter_C" symbol="C"/>
<letter id="letter_G" symbol="G"/>
<letter id="letter_T" symbol="T"/>
</alphabet>
<ambigs>
<letter id="letter_B" symbol="B"/>
<letter id="letter_D" symbol="D"/>
<letter id="letter_H" symbol="H"/>
<letter id="letter_K" symbol="K"/>
<letter id="letter_M" symbol="M"/>
<letter id="letter_N" symbol="N"/>
<letter id="letter_R" symbol="R"/>
<letter id="letter_S" symbol="S"/>
<letter id="letter_U" symbol="U"/>
<letter id="letter_V" symbol="V"/>
<letter id="letter_W" symbol="W"/>
<letter id="letter_Y" symbol="Y"/>
<letter id="letter_star" symbol="*"/>
<letter id="letter_-" symbol="-"/>
<letter id="letter_X" symbol="X"/>
</ambigs>
<sequence id="sequence_0" name="chr12:32050294-32050344" length="50" weight="1.000000" />
<sequence id="sequence_1" name="chr13:14543015-14543065" length="50" weight="1.000000" />
<sequence id="sequence_2" name="chr14:118194779-118194829" length="50" weight="1.000000" />
<sequence id="sequence_3" name="chr15:66826304-66826354" length="50" weight="1.000000" />
<sequence id="sequence_4" name="chr18:38495027-38495077" length="50" weight="1.000000" />
<sequence id="sequence_5" name="chr18:32542596-32542646" length="50" weight="1.000000" />
<sequence id="sequence_6" name="chr1:130300261-130300311" length="50" weight="1.000000" />
<sequence id="sequence_7" name="chr1:134093055-134093105" length="50" weight="1.000000" />
<sequence id="sequence_8" name="chr3:146405913-146405963" length="50" weight="1.000000" />
<sequence id="sequence_9" name="chr6:88203156-88203206" length="50" weight="1.000000" />
<sequence id="sequence_10" name="chr6:88117084-88117134" length="50" weight="1.000000" />
<sequence id="sequence_11" name="chr7:103861092-103861142" length="50" weight="1.000000" />
<sequence id="sequence_12" name="chr7:103861104-103861154" length="50" weight="1.000000" />
<sequence id="sequence_13" name="chr7:97210195-97210245" length="50" weight="1.000000" />
<sequence id="sequence_14" name="chr7:16295063-16295113" length="50" weight="1.000000" />
<sequence id="sequence_15" name="chr7:111004333-111004383" length="50" weight="1.000000" />
<sequence id="sequence_16" name="chr8:122313437-122313487" length="50" weight="1.000000" />
<sequence id="sequence_17" name="chr9:123958119-123958169" length="50" weight="1.000000" />
<sequence id="sequence_18" name="chrX:7971530-7971580" length="50" weight="1.000000" />
<sequence id="sequence_19" name="chrX:7841203-7841253" length="50" weight="1.000000" />
<letter_frequencies>
<alphabet_array>
<value letter_id="letter_A">0.227</value>
<value letter_id="letter_C">0.253</value>
<value letter_id="letter_G">0.281</value>
<value letter_id="letter_T">0.239</value>
</alphabet_array>
</letter_frequencies>
</training_set>
<model>
<command_line>meme GATATopEnh.radius25bp.fa -maxw 25 -dna -nmotifs 10 -maxsize 200000 -o GATATopEnh.radius25bp.meme.maxw25 </command_line>
<host>pongo</host>
<type>zoops</type>
<nmotifs>10</nmotifs>
<evalue_threshold>inf</evalue_threshold>
<object_function>E-value of product of p-values</object_function>
<min_width>8</min_width>
<max_width>25</max_width>
<minic>    0.00</minic>
<wg>11</wg>
<ws>1</ws>
<endgaps>yes</endgaps>
<minsites>2</minsites>
<maxsites>20</maxsites>
<wnsites>0.8</wnsites>
<prob>1</prob>
<spmap>uni</spmap>
<spfuzz>0.5</spfuzz>
<prior>dirichlet</prior>
<beta>0.01</beta>
<maxiter>50</maxiter>
<distance>1e-05</distance>
<num_sequences>20</num_sequences>
<num_positions>1000</num_positions>
<seed>0</seed>
<seqfrac>       1</seqfrac>
<strands>forward</strands>
<priors_file></priors_file>
<reason_for_stopping>Stopped because nmotifs = 10 reached.</reason_for_stopping>
<background_frequencies source="dataset with add-one prior applied">
<alphabet_array>
<value letter_id="letter_A">0.227</value>
<value letter_id="letter_C">0.253</value>
<value letter_id="letter_G">0.281</value>
<value letter_id="letter_T">0.239</value>
</alphabet_array>
</background_frequencies>
</model>
<motifs>
<motif id="motif_1" name="1" width="20" sites="11" ic="16.8" re="16.8" llr="128" e_value="1.2e-003" bayes_threshold="6.15164" elapsed_time="0.332000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">26</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">-162</value>
<value letter_id="letter_T">141</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">26</value>
<value letter_id="letter_C">111</value>
<value letter_id="letter_G">-63</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">183</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">52</value>
<value letter_id="letter_G">-63</value>
<value letter_id="letter_T">93</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">26</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">37</value>
<value letter_id="letter_T">60</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">84</value>
<value letter_id="letter_G">-63</value>
<value letter_id="letter_T">60</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">100</value>
<value letter_id="letter_C">11</value>
<value letter_id="letter_G">-162</value>
<value letter_id="letter_T">-39</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">68</value>
<value letter_id="letter_C">52</value>
<value letter_id="letter_G">-63</value>
<value letter_id="letter_T">-139</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-32</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">137</value>
<value letter_id="letter_T">-139</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">52</value>
<value letter_id="letter_G">118</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-32</value>
<value letter_id="letter_C">84</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">60</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">126</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">-162</value>
<value letter_id="letter_T">60</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">169</value>
<value letter_id="letter_T">-139</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">200</value>
<value letter_id="letter_C">-147</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-1010</value>
<value letter_id="letter_C">-147</value>
<value letter_id="letter_G">-1010</value>
<value letter_id="letter_T">193</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">100</value>
<value letter_id="letter_C">-147</value>
<value letter_id="letter_G">-4</value>
<value letter_id="letter_T">-39</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">126</value>
<value letter_id="letter_C">11</value>
<value letter_id="letter_G">-63</value>
<value letter_id="letter_T">-1010</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-32</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">96</value>
<value letter_id="letter_T">19</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">68</value>
<value letter_id="letter_C">-1010</value>
<value letter_id="letter_G">69</value>
<value letter_id="letter_T">-39</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.272727</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.090909</value>
<value letter_id="letter_T">0.636364</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.272727</value>
<value letter_id="letter_C">0.545455</value>
<value letter_id="letter_G">0.181818</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.363636</value>
<value letter_id="letter_G">0.181818</value>
<value letter_id="letter_T">0.454545</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.272727</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.363636</value>
<value letter_id="letter_T">0.363636</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.454545</value>
<value letter_id="letter_G">0.181818</value>
<value letter_id="letter_T">0.363636</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.454545</value>
<value letter_id="letter_C">0.272727</value>
<value letter_id="letter_G">0.090909</value>
<value letter_id="letter_T">0.181818</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.363636</value>
<value letter_id="letter_C">0.363636</value>
<value letter_id="letter_G">0.181818</value>
<value letter_id="letter_T">0.090909</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.181818</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.727273</value>
<value letter_id="letter_T">0.090909</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.363636</value>
<value letter_id="letter_G">0.636364</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.181818</value>
<value letter_id="letter_C">0.454545</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.363636</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.545455</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.090909</value>
<value letter_id="letter_T">0.363636</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.909091</value>
<value letter_id="letter_T">0.090909</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.909091</value>
<value letter_id="letter_C">0.090909</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.090909</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.909091</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.454545</value>
<value letter_id="letter_C">0.090909</value>
<value letter_id="letter_G">0.272727</value>
<value letter_id="letter_T">0.181818</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.545455</value>
<value letter_id="letter_C">0.272727</value>
<value letter_id="letter_G">0.181818</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.181818</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.545455</value>
<value letter_id="letter_T">0.272727</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.363636</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.454545</value>
<value letter_id="letter_T">0.181818</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[TA][CA]TG[TC][GTA][CT][AC][AC]G[GC][CT][AT]GAT[AG][AC][GT][GA]
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_9" position="30" strand="plus" pvalue="1.93e-08" >
<left_flank>TATCCGGACA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank></right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_8" position="3" strand="plus" pvalue="1.93e-08" >
<left_flank>CCA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>GGTCCAGGGA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_12" position="3" strand="plus" pvalue="3.04e-07" >
<left_flank>TGC</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GCTCACAAGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_11" position="15" strand="plus" pvalue="3.04e-07" >
<left_flank>TCAGCACTGC</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>GCTCACAAGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_2" position="7" strand="plus" pvalue="4.31e-07" >
<left_flank>TCCAACA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>AAACAGTGTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_5" position="22" strand="plus" pvalue="2.28e-06" >
<left_flank>AGGCTCAGCT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>GGCAGACC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="14" strand="plus" pvalue="5.37e-06" >
<left_flank>GATATGGGCT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CCAGGCCAGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_6" position="13" strand="plus" pvalue="6.19e-06" >
<left_flank>GCAGTTGGTT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>GCAGTTTAAC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_13" position="28" strand="plus" pvalue="6.63e-06" >
<left_flank>AGCCACAGAA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>GG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_16" position="9" strand="plus" pvalue="8.63e-06" >
<left_flank>GTTATCTAG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>CTTGCAGGCC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_7" position="22" strand="plus" pvalue="2.13e-05" >
<left_flank>GGGCGGGGCT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CCACGCAA</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_2" name="2" width="12" sites="9" ic="14.2" re="14.2" llr="89" e_value="1.2e+000" bayes_threshold="6.55646" elapsed_time="0.524000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-982</value>
<value letter_id="letter_C">40</value>
<value letter_id="letter_G">125</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-982</value>
<value letter_id="letter_C">198</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">129</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">89</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-103</value>
<value letter_id="letter_C">140</value>
<value letter_id="letter_G">-34</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">129</value>
<value letter_id="letter_C">-19</value>
<value letter_id="letter_G">-34</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-103</value>
<value letter_id="letter_C">113</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">48</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">97</value>
<value letter_id="letter_C">113</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">129</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">89</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-982</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">183</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-982</value>
<value letter_id="letter_C">-119</value>
<value letter_id="letter_G">98</value>
<value letter_id="letter_T">48</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-103</value>
<value letter_id="letter_C">181</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">-982</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-982</value>
<value letter_id="letter_C">-982</value>
<value letter_id="letter_G">-982</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.333333</value>
<value letter_id="letter_G">0.666667</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.555556</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.444444</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.111111</value>
<value letter_id="letter_C">0.666667</value>
<value letter_id="letter_G">0.222222</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.555556</value>
<value letter_id="letter_C">0.222222</value>
<value letter_id="letter_G">0.222222</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.111111</value>
<value letter_id="letter_C">0.555556</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.333333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.444444</value>
<value letter_id="letter_C">0.555556</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.555556</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.444444</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.111111</value>
<value letter_id="letter_G">0.555556</value>
<value letter_id="letter_T">0.333333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.111111</value>
<value letter_id="letter_C">0.888889</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[GC]C[AT][CG][ACG][CT][CA][AT]G[GT]CT
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_12" position="23" strand="plus" pvalue="5.43e-07" >
<left_flank>CTAGATGCTG</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GAACACACCC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_11" position="35" strand="plus" pvalue="5.43e-07" >
<left_flank>CTAGATGCTG</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_4" position="16" strand="plus" pvalue="1.22e-05" >
<left_flank>GAGCTTGGCA</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GGTGTGGGGA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_19" position="18" strand="plus" pvalue="1.34e-05" >
<left_flank>TCAGTACGGT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>ATCGGTTGGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_3" position="27" strand="plus" pvalue="1.34e-05" >
<left_flank>TCTTGTGTCT</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>CTCTGGCCTT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_1" position="5" strand="plus" pvalue="1.34e-05" >
<left_flank>CTCCA</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>CCTGGGAGTC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_10" position="24" strand="plus" pvalue="2.78e-05" >
<left_flank>ACCTTCTTTA</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>ACAGAGCATT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_17" position="2" strand="plus" pvalue="3.66e-05" >
<left_flank>GG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GTTTGTTTTT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="34" strand="plus" pvalue="7.09e-05" >
<left_flank>CTAGATGGGG</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GCAG</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_3" name="3" width="11" sites="4" ic="16.6" re="16.7" llr="46" e_value="1.8e+002" bayes_threshold="7.63662" elapsed_time="0.680000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">214</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">198</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">172</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">6</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">98</value>
<value letter_id="letter_G">-17</value>
<value letter_id="letter_T">6</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">172</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">6</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">183</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">198</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">214</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">98</value>
<value letter_id="letter_G">-17</value>
<value letter_id="letter_T">6</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">14</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">-865</value>
<value letter_id="letter_T">165</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-865</value>
<value letter_id="letter_C">-865</value>
<value letter_id="letter_G">183</value>
<value letter_id="letter_T">-865</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.750000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.750000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.250000</value>
<value letter_id="letter_T">0.250000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.250000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.750000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
AC[AT][CGT][AT]GCA[CGT][TA]G
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_1" position="27" strand="plus" pvalue="5.93e-07" >
<left_flank>CCTGGGAGTC</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>TTCCTAGAAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_11" position="3" strand="plus" pvalue="1.68e-06" >
<left_flank>ATG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CTGTGCTCAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_10" position="36" strand="plus" pvalue="2.29e-06" >
<left_flank>ACATCAGGAT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CAT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_4" position="37" strand="plus" pvalue="1.05e-05" >
<left_flank>TGGTGTGGGG</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
</site>
<right_flank>CC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_4" name="4" width="8" sites="2" ic="16.0" re="16.5" llr="23" e_value="7.3e+002" bayes_threshold="8.74483" elapsed_time="0.824000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">198</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">198</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">198</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
ACACTATC
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_19" position="2" strand="plus" pvalue="1.08e-05" >
<left_flank>AA</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>AGTACGGTGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_3" position="11" strand="plus" pvalue="1.08e-05" >
<left_flank>CTGCTACCTC</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>TTGTGTCTGC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_5" name="5" width="8" sites="2" ic="15.0" re="15.5" llr="21" e_value="1.4e+003" bayes_threshold="8.74483" elapsed_time="0.960000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">113</value>
<value letter_id="letter_C">98</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">183</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
T[AC]AGATAT
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_0" position="19" strand="plus" pvalue="1.02e-05" >
<left_flank>TATACCATAT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>CAGCGATTCC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="1" strand="plus" pvalue="2.15e-05" >
<left_flank>C</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
</site>
<right_flank>GGGCTTATGG</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_6" name="6" width="11" sites="2" ic="19.0" re="19.5" llr="27" e_value="2.7e+003" bayes_threshold="8.64024" elapsed_time="1.096000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">113</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">83</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">198</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">113</value>
<value letter_id="letter_C">98</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">98</value>
<value letter_id="letter_G">83</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">183</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
TTA[AG]C[AC]A[CG]AGA
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_6" position="38" strand="plus" pvalue="2.97e-07" >
<left_flank>TAAAAGCAGT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>C</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_13" position="16" strand="plus" pvalue="1.19e-06" >
<left_flank>TTCTACAGCT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>ATCTGGAGAA</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_7" name="7" width="11" sites="2" ic="19.0" re="19.6" llr="27" e_value="3.5e+003" bayes_threshold="8.64024" elapsed_time="1.208000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">198</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">98</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">106</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">198</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">98</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">106</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">198</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">113</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">106</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
CA[CT]CT[CT]CT[AT]TA
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_0" position="2" strand="plus" pvalue="6.16e-07" >
<left_flank>TC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>CCATATTAAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_10" position="13" strand="plus" pvalue="1.11e-06" >
<left_flank>CCCCGTGGGC</left_flank>
<site>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>CCACATCAGG</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_8" name="8" width="8" sites="2" ic="14.0" re="14.4" llr="20" e_value="3.9e+003" bayes_threshold="8.74483" elapsed_time="1.324000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">83</value>
<value letter_id="letter_T">106</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">183</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">113</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">83</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.500000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[GT]AAATG[AG]A
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_2" position="42" strand="plus" pvalue="2.10e-05" >
<left_flank>GTGTGTGTCG</left_flank>
<site>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank></right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_17" position="23" strand="plus" pvalue="3.30e-05" >
<left_flank>TGTTTGTTTT</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>GTGCATTAGG</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_9" name="9" width="8" sites="2" ic="13.0" re="13.6" llr="19" e_value="4.3e+003" bayes_threshold="8.74483" elapsed_time="1.432000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">113</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">106</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">183</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">113</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">106</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">98</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">106</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.500000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.500000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.500000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[AT]AG[AT]AA[CT]A
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_1" position="42" strand="plus" pvalue="3.83e-05" >
<left_flank>GCACTGTTCC</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank></right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_8" position="35" strand="plus" pvalue="6.89e-05" >
<left_flank>TCCAGGGATT</left_flank>
<site>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
</site>
<right_flank>GGGCCAC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_10" name="10" width="8" sites="2" ic="16.0" re="15.7" llr="22" e_value="6.1e+003" bayes_threshold="8.74483" elapsed_time="1.532000">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">183</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">198</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">213</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">183</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">-765</value>
<value letter_id="letter_G">183</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">-765</value>
<value letter_id="letter_C">198</value>
<value letter_id="letter_G">-765</value>
<value letter_id="letter_T">-765</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">1.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">0.000000</value>
<value letter_id="letter_G">1.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="letter_A">0.000000</value>
<value letter_id="letter_C">1.000000</value>
<value letter_id="letter_G">0.000000</value>
<value letter_id="letter_T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
TTGCAGGC
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_18" position="16" strand="plus" pvalue="1.84e-05" >
<left_flank>GGGGAGCCCA</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>GGGGGTGGGG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_16" position="30" strand="plus" pvalue="1.84e-05" >
<left_flank>CTGACTAATC</left_flank>
<site>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_T"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
<letter_ref letter_id="letter_A"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_G"/>
<letter_ref letter_id="letter_C"/>
</site>
<right_flank>CCGGGGTTTC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
</motifs>
<scanned_sites_summary p_thresh="0.0001">
<scanned_sites sequence_id="sequence_0" pvalue="7.71e-05" num_sites="2"><scanned_site motif_id="motif_7" strand="plus" position="2" pvalue="6.16e-07"/>
<scanned_site motif_id="motif_5" strand="plus" position="19" pvalue="1.02e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_1" pvalue="1.32e-06" num_sites="3"><scanned_site motif_id="motif_2" strand="plus" position="5" pvalue="1.34e-05"/>
<scanned_site motif_id="motif_3" strand="plus" position="27" pvalue="5.93e-07"/>
<scanned_site motif_id="motif_9" strand="plus" position="42" pvalue="3.83e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_2" pvalue="3.65e-07" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="7" pvalue="4.31e-07"/>
<scanned_site motif_id="motif_8" strand="plus" position="42" pvalue="2.10e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_3" pvalue="6.68e-04" num_sites="2"><scanned_site motif_id="motif_4" strand="plus" position="11" pvalue="1.08e-05"/>
<scanned_site motif_id="motif_2" strand="plus" position="27" pvalue="1.34e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_4" pvalue="1.06e-03" num_sites="2"><scanned_site motif_id="motif_2" strand="plus" position="16" pvalue="1.22e-05"/>
<scanned_site motif_id="motif_3" strand="plus" position="37" pvalue="1.05e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_5" pvalue="9.90e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="22" pvalue="2.28e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_6" pvalue="8.08e-05" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="13" pvalue="6.19e-06"/>
<scanned_site motif_id="motif_6" strand="plus" position="38" pvalue="2.97e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_7" pvalue="5.20e-01" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="22" pvalue="2.13e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_8" pvalue="2.52e-05" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="3" pvalue="1.93e-08"/>
<scanned_site motif_id="motif_9" strand="plus" position="35" pvalue="6.89e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_9" pvalue="1.39e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="30" pvalue="1.93e-08"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_10" pvalue="1.62e-06" num_sites="3"><scanned_site motif_id="motif_7" strand="plus" position="13" pvalue="1.11e-06"/>
<scanned_site motif_id="motif_2" strand="plus" position="24" pvalue="2.78e-05"/>
<scanned_site motif_id="motif_3" strand="plus" position="36" pvalue="2.29e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_11" pvalue="9.91e-08" num_sites="3"><scanned_site motif_id="motif_3" strand="plus" position="3" pvalue="1.68e-06"/>
<scanned_site motif_id="motif_1" strand="plus" position="15" pvalue="3.04e-07"/>
<scanned_site motif_id="motif_2" strand="plus" position="35" pvalue="5.43e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_12" pvalue="2.65e-05" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="3" pvalue="3.04e-07"/>
<scanned_site motif_id="motif_2" strand="plus" position="23" pvalue="5.43e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_13" pvalue="2.29e-06" num_sites="2"><scanned_site motif_id="motif_6" strand="plus" position="16" pvalue="1.19e-06"/>
<scanned_site motif_id="motif_1" strand="plus" position="28" pvalue="6.63e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_14" pvalue="9.44e-01" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_15" pvalue="3.04e-04" num_sites="3"><scanned_site motif_id="motif_5" strand="plus" position="1" pvalue="2.15e-05"/>
<scanned_site motif_id="motif_1" strand="plus" position="14" pvalue="5.37e-06"/>
<scanned_site motif_id="motif_2" strand="plus" position="34" pvalue="7.09e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_16" pvalue="1.72e-03" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="9" pvalue="8.63e-06"/>
<scanned_site motif_id="motif_10" strand="plus" position="30" pvalue="1.84e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_17" pvalue="6.09e-03" num_sites="2"><scanned_site motif_id="motif_2" strand="plus" position="2" pvalue="3.66e-05"/>
<scanned_site motif_id="motif_8" strand="plus" position="23" pvalue="3.30e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_18" pvalue="3.22e-01" num_sites="1"><scanned_site motif_id="motif_10" strand="plus" position="16" pvalue="1.84e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_19" pvalue="6.26e-03" num_sites="2"><scanned_site motif_id="motif_4" strand="plus" position="2" pvalue="1.08e-05"/>
<scanned_site motif_id="motif_2" strand="plus" position="18" pvalue="1.34e-05"/>
</scanned_sites>
</scanned_sites_summary>
</MEME>
