# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SNF2_N PF00176.18 CAMPEP_0200759464 - 5.2e-61 206.0 0.0 4.2e-30 104.5 0.0 2.3 2 0 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200759464 - 2.5e-14 52.8 0.0 1.3e-13 50.5 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain zf-PARP PF00645.13 CAMPEP_0200759464 - 3.3e-12 46.4 0.0 1.9e-11 44.0 0.0 2.3 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region SAP PF02037.22 CAMPEP_0200759464 - 1.2e-09 37.4 0.1 3.4e-09 36.0 0.0 1.8 1 0 0 1 1 1 1 SAP domain zf-RING_2 PF13639.1 CAMPEP_0200759464 - 7.5e-09 35.2 3.6 7.5e-09 35.2 2.5 2.6 2 0 0 2 2 1 1 Ring finger domain ResIII PF04851.10 CAMPEP_0200759464 - 1e-05 25.4 0.0 0.006 16.4 0.0 2.7 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit zf-C3HC4 PF00097.20 CAMPEP_0200759464 - 0.00018 21.0 2.8 0.00018 21.0 2.0 2.6 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.2 CAMPEP_0200759464 - 0.0012 18.9 0.8 0.0043 17.1 0.5 2.0 1 0 0 1 1 1 1 RING-H2 zinc finger zf-C3HC4_2 PF13923.1 CAMPEP_0200759464 - 0.0012 18.8 3.9 0.0012 18.8 2.7 3.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.1 CAMPEP_0200759464 - 0.0046 16.6 2.6 0.0046 16.6 1.8 3.2 2 1 0 2 2 2 1 zinc-RING finger domain zf-Nse PF11789.3 CAMPEP_0200759464 - 0.031 13.7 1.0 0.078 12.5 0.7 1.6 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit SNF2_N PF00176.18 CAMPEP_0200764774 - 4.2e-54 183.3 0.0 1.7e-52 178.0 0.0 2.8 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200764774 - 6.5e-12 45.1 0.0 3.1e-11 42.9 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0200764774 - 1.9e-06 27.8 0.0 0.00034 20.5 0.0 3.4 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 CAMPEP_0200762918 - 1.7e-56 191.2 0.0 2.4e-56 190.7 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200762918 - 5.5e-12 45.3 0.0 1.8e-11 43.7 0.0 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0200762918 - 9.3e-09 35.3 0.0 2.8e-08 33.8 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0200762918 - 1.4e-08 34.4 0.0 3.7e-08 33.0 0.0 1.7 1 0 0 1 1 1 1 DEAD/DEAH box helicase UBA PF00627.26 CAMPEP_0200762918 - 0.00023 20.8 0.0 0.00063 19.5 0.0 1.8 1 0 0 1 1 1 1 UBA/TS-N domain HDA2-3 PF11496.3 CAMPEP_0200762918 - 0.0023 16.7 0.3 0.041 12.6 0.1 2.5 2 0 0 2 2 2 1 Class II histone deacetylase complex subunits 2 and 3 SNF2_N PF00176.18 CAMPEP_0200772944 - 6.3e-64 215.6 0.1 8.3e-64 215.2 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200772944 - 3e-14 52.6 0.0 1.4e-13 50.4 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain HDA2-3 PF11496.3 CAMPEP_0200772944 - 7.3e-06 25.0 0.0 0.00013 20.8 0.0 2.1 2 0 0 2 2 2 1 Class II histone deacetylase complex subunits 2 and 3 ResIII PF04851.10 CAMPEP_0200772944 - 1.5e-05 24.8 0.0 0.0013 18.6 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0200772944 - 7.6e-05 22.2 0.0 0.00016 21.2 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase SNF2_N PF00176.18 CAMPEP_0200778832 - 2.1e-59 200.7 0.0 3.4e-59 200.0 0.0 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain zf-C3HC4_3 PF13920.1 CAMPEP_0200778832 - 2.9e-12 46.0 12.8 7.5e-12 44.7 8.8 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Helicase_C PF00271.26 CAMPEP_0200778832 - 1.1e-11 44.4 0.0 3e-11 43.0 0.0 1.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain zf-C3HC4_2 PF13923.1 CAMPEP_0200778832 - 0.023 14.7 17.7 0.07 13.1 12.3 1.9 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.1 CAMPEP_0200778832 - 0.19 11.4 15.7 0.59 9.9 10.8 1.9 1 0 0 1 1 1 0 zinc-RING finger domain Spc7 PF08317.6 CAMPEP_0200778832 - 0.29 9.7 7.5 3.6 6.1 2.4 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF1515 PF07439.6 CAMPEP_0200778832 - 0.78 9.5 4.2 0.2 11.4 0.2 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1515) YlbD_coat PF14071.1 CAMPEP_0200778832 - 1.7 8.6 5.6 1.6 8.8 0.9 2.5 2 0 0 2 2 2 0 Putative coat protein IncA PF04156.9 CAMPEP_0200778832 - 3.7 7.1 18.1 10 5.6 7.4 2.7 2 0 0 2 2 2 0 IncA protein SNF2_N PF00176.18 CAMPEP_0200804768 - 2.6e-60 203.7 0.0 4.3e-60 203.0 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200804768 - 3.9e-12 45.8 0.0 1.3e-11 44.1 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0200804768 - 7.5e-08 32.4 0.0 7.2e-07 29.2 0.0 2.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 CAMPEP_0200806060 - 2.2e-52 177.7 0.0 7.1e-52 176.0 0.0 1.9 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200806060 - 4.9e-13 48.7 0.0 2.1e-12 46.7 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0200806060 - 5e-06 26.4 0.2 8.8e-05 22.4 0.0 2.8 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 CAMPEP_0200810104 - 2.9e-63 213.4 0.0 7.1e-63 212.1 0.0 1.7 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200810104 - 2.5e-13 49.7 0.0 9e-13 47.8 0.0 2.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0200810104 - 1.8e-06 27.9 10.0 1.6e-05 24.7 0.0 5.0 5 1 0 5 5 5 1 Type III restriction enzyme, res subunit Agenet PF05641.7 CAMPEP_0200810104 - 0.00022 21.3 0.1 0.28 11.3 0.0 2.7 2 0 0 2 2 2 2 Agenet domain zf-RanBP PF00641.13 CAMPEP_0200810104 - 0.00027 19.9 8.8 0.073 12.1 0.5 2.6 2 0 0 2 2 2 2 Zn-finger in Ran binding protein and others NCD3G PF07562.9 CAMPEP_0200810104 - 3.4 7.4 9.8 1.6 8.5 1.7 2.9 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR SNF2_N PF00176.18 CAMPEP_0200799838 - 7.7e-55 185.7 0.1 1.1e-53 181.9 0.0 2.4 2 0 0 2 2 2 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200799838 - 4e-11 42.6 0.2 4.3e-10 39.3 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain zf-C3HC4_3 PF13920.1 CAMPEP_0200799838 - 1.6e-09 37.2 12.1 3.9e-09 36.0 8.4 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) WEMBL PF05701.6 CAMPEP_0200799838 - 6.5e-05 21.5 5.5 6.5e-05 21.5 3.8 2.2 2 0 0 2 2 2 1 Weak chloroplast movement under blue light zf-C3HC4_2 PF13923.1 CAMPEP_0200799838 - 0.0015 18.5 10.3 0.0044 17.0 7.1 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Dala_Dala_lig_N PF01820.16 CAMPEP_0200799838 - 3.8 7.8 9.9 0.075 13.3 0.3 2.9 3 0 0 3 3 3 0 D-ala D-ala ligase N-terminus SNF2_N PF00176.18 CAMPEP_0200796714 - 2.7e-71 239.7 0.1 4.5e-71 239.0 0.1 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200796714 - 7.2e-12 44.9 0.1 6.4e-11 41.9 0.0 2.6 3 0 0 3 3 3 1 Helicase conserved C-terminal domain zf-RING_2 PF13639.1 CAMPEP_0200796714 - 4.6e-09 35.9 17.0 1.3e-08 34.5 11.8 1.9 1 0 0 1 1 1 1 Ring finger domain DEAD PF00270.24 CAMPEP_0200796714 - 2.1e-07 30.6 0.0 6.6e-07 28.9 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase zf-C3HC4_2 PF13923.1 CAMPEP_0200796714 - 6.9e-06 25.9 16.6 1.9e-05 24.6 11.5 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.20 CAMPEP_0200796714 - 1e-05 25.0 15.3 2.6e-05 23.7 10.6 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) ResIII PF04851.10 CAMPEP_0200796714 - 0.0003 20.6 0.0 0.0011 18.8 0.0 1.9 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit zf-rbx1 PF12678.2 CAMPEP_0200796714 - 0.00034 20.6 8.3 0.00098 19.1 5.7 1.8 1 0 0 1 1 1 1 RING-H2 zinc finger zf-Apc11 PF12861.2 CAMPEP_0200796714 - 0.00041 20.1 6.8 0.00093 18.9 4.7 1.6 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.1 CAMPEP_0200796714 - 0.0016 18.1 14.7 0.0035 17.0 10.2 1.7 1 0 0 1 1 1 1 zinc-RING finger domain SNF2_N PF00176.18 CAMPEP_0200823884 - 1.3e-52 178.4 0.1 8.9e-51 172.4 0.0 3.5 3 1 0 3 3 3 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200823884 - 5.2e-14 51.8 0.0 1.2e-13 50.6 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0200823884 - 9e-06 25.6 0.5 0.002 18.0 0.0 3.7 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit Reo_sigmaC PF04582.7 CAMPEP_0200823884 - 6.1 5.9 6.8 2.2 7.3 1.5 2.2 2 0 0 2 2 2 0 Reovirus sigma C capsid protein SNF2_N PF00176.18 CAMPEP_0200848262 - 2.2e-64 217.1 0.6 4e-64 216.2 0.4 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200848262 - 9.6e-18 63.8 0.1 6.6e-17 61.1 0.0 2.5 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0200848262 - 2e-08 34.2 0.1 5.6e-08 32.8 0.0 1.8 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DUF3890 PF13029.1 CAMPEP_0200848262 - 0.01 15.8 0.1 0.037 14.0 0.0 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3890) AAA_11 PF13086.1 CAMPEP_0200848262 - 0.53 9.8 14.2 0.28 10.7 4.3 3.4 2 2 0 2 2 2 0 AAA domain SNF2_N PF00176.18 CAMPEP_0200847172 - 1.5e-57 194.6 0.0 2.2e-57 194.1 0.0 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200847172 - 8.7e-14 51.1 0.0 6.7e-12 45.1 0.0 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0200847172 - 1.4e-08 34.8 0.3 2.1e-05 24.4 0.0 3.4 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 CAMPEP_0200848914 - 1.1e-45 155.7 0.0 1.6e-45 155.1 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200848914 - 1e-12 47.6 0.0 3.8e-12 45.9 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0200848914 - 0.0046 16.8 0.0 0.32 10.7 0.0 2.2 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit SNF2_N PF00176.18 CAMPEP_0200867366 - 2.8e-54 183.9 0.0 7.6e-54 182.5 0.0 1.8 2 0 0 2 2 2 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200867366 - 3.1e-12 46.1 0.0 7.6e-12 44.9 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.24 CAMPEP_0200867366 - 1.9e-06 27.4 0.0 7e-06 25.6 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase PHD PF00628.24 CAMPEP_0200867366 - 3e-06 26.8 7.1 3e-06 26.8 4.9 3.8 4 0 0 4 4 4 1 PHD-finger AAA_22 PF13401.1 CAMPEP_0200867366 - 0.017 15.2 0.1 0.19 11.8 0.0 2.8 3 0 0 3 3 3 0 AAA domain zf-CCHC_4 PF14392.1 CAMPEP_0200867366 - 7.3 6.3 14.4 4.1 7.1 0.3 3.7 3 0 0 3 3 3 0 Zinc knuckle SNF2_N PF00176.18 CAMPEP_0200866862 - 6.6e-33 113.7 2.5 8.8e-23 80.5 0.0 2.5 2 1 1 3 3 3 2 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200866862 - 3.4e-11 42.8 0.1 9e-11 41.4 0.1 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain RQC PF09382.5 CAMPEP_0200866862 - 3.5e-09 36.3 0.0 8.8e-09 35.0 0.0 1.6 1 0 0 1 1 1 1 RQC domain PDZ PF00595.19 CAMPEP_0200866862 - 0.057 13.6 0.0 0.16 12.1 0.0 1.7 1 0 0 1 1 1 0 PDZ domain (Also known as DHR or GLGF) SNF2_N PF00176.18 CAMPEP_0200860782 - 1.6e-60 204.4 0.0 6.7e-30 103.9 0.0 2.5 2 1 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200860782 - 2e-15 56.3 0.0 6.9e-15 54.6 0.0 2.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain zf-RING_2 PF13639.1 CAMPEP_0200860782 - 3.1e-10 39.7 5.7 3.1e-10 39.7 3.9 2.5 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.1 CAMPEP_0200860782 - 3.6e-07 30.1 4.0 3.6e-07 30.1 2.8 2.7 2 1 1 3 3 2 1 Zinc finger, C3HC4 type (RING finger) ResIII PF04851.10 CAMPEP_0200860782 - 9.5e-06 25.5 0.0 0.00082 19.2 0.0 2.5 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit zf-rbx1 PF12678.2 CAMPEP_0200860782 - 1.1e-05 25.4 1.1 1.1e-05 25.4 0.8 2.2 2 0 0 2 2 1 1 RING-H2 zinc finger zf-C3HC4 PF00097.20 CAMPEP_0200860782 - 1.7e-05 24.3 3.4 1.7e-05 24.3 2.4 3.0 3 0 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-Apc11 PF12861.2 CAMPEP_0200860782 - 0.0051 16.6 1.6 0.015 15.1 1.1 1.8 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.1 CAMPEP_0200860782 - 0.0087 15.7 4.3 0.0087 15.7 3.0 3.0 3 0 0 3 3 3 1 zinc-RING finger domain zf-Nse PF11789.3 CAMPEP_0200860782 - 0.02 14.4 0.5 0.053 13.0 0.3 1.7 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit FANCL_C PF11793.3 CAMPEP_0200860782 - 0.022 14.7 2.4 0.1 12.5 1.7 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING_UBOX PF13445.1 CAMPEP_0200860782 - 0.15 11.8 3.9 0.089 12.5 0.5 2.3 2 0 0 2 2 2 0 RING-type zinc-finger DUF3890 PF13029.1 CAMPEP_0200860782 - 0.16 12.0 0.1 0.41 10.7 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3890) zf-RING_6 PF14835.1 CAMPEP_0200860782 - 0.3 10.8 3.4 1.1 9.0 2.4 1.9 1 0 0 1 1 1 0 zf-RING of BARD1-type protein SNF2_N PF00176.18 CAMPEP_0200860406 - 5.2e-53 179.7 0.0 7.7e-52 175.9 0.0 2.3 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0200860406 - 3.6e-12 45.9 0.0 7.9e-12 44.8 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0200860406 - 1.7e-05 24.7 0.0 7.4e-05 22.6 0.0 2.1 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DUF2075 PF09848.4 CAMPEP_0200860406 - 0.03 13.3 0.0 0.071 12.0 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075)