# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SNF2_N PF00176.18 CAMPEP_0186410308 - 1.1e-66 224.7 0.1 1.7e-66 224.0 0.1 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186410308 - 2.5e-15 56.0 0.0 6.9e-15 54.6 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HDA2-3 PF11496.3 CAMPEP_0186410308 - 1.2e-06 27.6 0.0 2.5e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 cNMP_binding PF00027.24 CAMPEP_0186410308 - 1.9e-06 27.5 0.0 1.1e-05 25.1 0.0 2.4 3 0 0 3 3 3 1 Cyclic nucleotide-binding domain ResIII PF04851.10 CAMPEP_0186410308 - 2e-05 24.5 0.0 0.00023 21.0 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit TIR_2 PF13676.1 CAMPEP_0186410308 - 5.6e-05 23.2 0.2 0.00048 20.2 0.0 2.8 2 0 0 2 2 2 1 TIR domain DEAD PF00270.24 CAMPEP_0186410308 - 6.8e-05 22.4 0.1 0.00023 20.6 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase AAA_22 PF13401.1 CAMPEP_0186410308 - 0.0019 18.3 0.2 0.013 15.6 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.1 CAMPEP_0186410308 - 1.7 8.1 5.6 3.1 7.3 0.4 3.3 2 2 0 2 2 2 0 AAA domain SNF2_N PF00176.18 CAMPEP_0186481046 - 3.7e-47 160.5 0.0 5.3e-47 160.0 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186481046 - 3.6e-13 49.1 0.0 3.2e-12 46.1 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0186481046 - 0.0019 18.0 0.0 0.019 14.8 0.0 2.1 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 CAMPEP_0186478318 - 2.4e-58 197.2 0.0 4.1e-30 104.6 0.0 2.6 2 1 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186478318 - 6.3e-13 48.4 0.0 2.2e-12 46.6 0.0 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain zf-PARP PF00645.13 CAMPEP_0186478318 - 2.6e-12 46.8 0.6 9.3e-12 45.0 0.0 2.3 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region zf-RING_2 PF13639.1 CAMPEP_0186478318 - 5e-09 35.8 1.8 5e-09 35.8 1.2 2.0 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.1 CAMPEP_0186478318 - 3.7e-06 26.8 0.9 3.7e-06 26.8 0.6 3.0 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.20 CAMPEP_0186478318 - 1e-05 25.0 0.4 1e-05 25.0 0.3 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.2 CAMPEP_0186478318 - 0.00036 20.5 0.9 0.0012 18.9 0.6 1.9 1 0 0 1 1 1 1 RING-H2 zinc finger ResIII PF04851.10 CAMPEP_0186478318 - 0.00046 20.0 0.0 0.057 13.2 0.0 2.5 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit zf-Apc11 PF12861.2 CAMPEP_0186478318 - 0.0087 15.8 1.5 0.024 14.4 1.0 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_1 PF14446.1 CAMPEP_0186478318 - 0.014 15.1 1.1 0.014 15.1 0.7 4.8 5 0 0 5 5 5 0 Prokaryotic RING finger family 1 SNF2_N PF00176.18 CAMPEP_0186423588 - 5.2e-68 229.0 0.0 1e-67 228.0 0.0 1.5 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186423588 - 7e-15 54.6 0.0 1.3e-14 53.8 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HDA2-3 PF11496.3 CAMPEP_0186423588 - 1.9e-06 26.9 0.0 5.5e-06 25.4 0.0 1.7 1 1 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 ResIII PF04851.10 CAMPEP_0186423588 - 0.0022 17.8 0.0 0.013 15.2 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit CCDC92 PF14916.1 CAMPEP_0186423588 - 0.016 14.7 0.0 0.048 13.2 0.0 1.7 1 0 0 1 1 1 0 Coiled-coil domain of unknown function SNF2_N PF00176.18 CAMPEP_0186428782 - 3.5e-32 111.3 0.1 6.4e-32 110.5 0.1 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186428782 - 3.5e-11 42.7 0.1 8.2e-11 41.6 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0186428782 - 0.00022 21.1 0.8 0.081 12.7 0.0 3.9 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit DEAD_2 PF06733.10 CAMPEP_0186428782 - 0.004 16.5 0.0 0.0081 15.5 0.0 1.4 1 0 0 1 1 1 1 DEAD_2 MRI PF15325.1 CAMPEP_0186428782 - 10 7.1 9.6 1.1 10.2 1.9 2.7 1 1 1 2 2 2 0 Modulator of retrovirus infection SNF2_N PF00176.18 CAMPEP_0186432166 - 4.4e-53 180.0 0.0 3.7e-52 176.9 0.0 2.5 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186432166 - 6.6e-13 48.3 0.0 3.9e-12 45.8 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0186432166 - 0.0037 17.1 7.1 0.0041 16.9 0.0 3.6 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit DUF3254 PF11630.3 CAMPEP_0186432166 - 0.12 12.3 1.3 0.23 11.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3254) SNF2_N PF00176.18 CAMPEP_0186440382 - 6.1e-31 107.3 0.0 1e-30 106.5 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186440382 - 7.4e-12 44.9 0.2 2.1e-11 43.5 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.24 CAMPEP_0186440382 - 1.1e-07 31.5 0.1 1e-06 28.3 0.0 2.5 2 1 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.10 CAMPEP_0186440382 - 0.00046 20.0 0.0 0.042 13.6 0.0 3.3 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C_4 PF13871.1 CAMPEP_0186440382 - 0.0037 16.7 0.2 0.0088 15.4 0.1 1.6 1 0 0 1 1 1 1 Helicase_C-like Flavi_DEAD PF07652.9 CAMPEP_0186440382 - 0.0083 15.8 0.0 0.028 14.1 0.0 1.9 1 0 0 1 1 1 1 Flavivirus DEAD domain DEAD_2 PF06733.10 CAMPEP_0186440382 - 0.02 14.2 0.2 0.055 12.8 0.0 1.7 1 1 1 2 2 2 0 DEAD_2 Mif2_N PF15624.1 CAMPEP_0186440382 - 2.2 8.8 5.4 2.6 8.6 0.4 2.3 2 0 0 2 2 2 0 Kinetochore CENP-C fungal homologue, Mif2, N-terminal SNF2_N PF00176.18 CAMPEP_0186416340 - 6e-32 110.6 0.0 9.6e-32 109.9 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186416340 - 1.2e-11 44.3 0.0 3.1e-11 42.9 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.24 CAMPEP_0186416340 - 7.6e-07 28.7 0.1 5.3e-06 26.0 0.0 2.4 2 1 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.10 CAMPEP_0186416340 - 6.1e-06 26.1 0.1 0.013 15.3 0.0 3.5 3 1 0 3 3 3 2 Type III restriction enzyme, res subunit Flavi_DEAD PF07652.9 CAMPEP_0186416340 - 0.0038 17.0 0.0 0.011 15.4 0.0 1.7 2 0 0 2 2 2 1 Flavivirus DEAD domain DEAD_2 PF06733.10 CAMPEP_0186416340 - 0.0065 15.8 0.0 0.016 14.6 0.0 1.6 1 0 0 1 1 1 1 DEAD_2 Terminase_1 PF03354.10 CAMPEP_0186416340 - 0.043 12.2 0.0 0.064 11.6 0.0 1.2 1 0 0 1 1 1 0 Phage Terminase AAA_22 PF13401.1 CAMPEP_0186416340 - 0.047 13.8 0.0 0.24 11.5 0.0 2.2 1 1 0 1 1 1 0 AAA domain SNF2_N PF00176.18 CAMPEP_0186441480 - 1.6e-54 184.7 0.0 2.1e-54 184.3 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186441480 - 3e-11 43.0 0.0 8.3e-11 41.6 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HDA2-3 PF11496.3 CAMPEP_0186441480 - 3.1e-06 26.2 0.0 6.7e-06 25.1 0.0 1.6 1 1 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 ResIII PF04851.10 CAMPEP_0186441480 - 7.2e-06 25.9 0.0 2.6e-05 24.1 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Maelstrom PF13017.1 CAMPEP_0186441480 - 0.14 11.6 1.0 3.1 7.2 0.2 2.4 2 0 0 2 2 2 0 piRNA pathway germ-plasm component SRP-alpha_N PF04086.8 CAMPEP_0186441480 - 2.6 7.3 6.2 4.4 6.6 4.3 1.3 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal SNF2_N PF00176.18 CAMPEP_0186467794 - 8.6e-61 205.3 0.0 1.5e-60 204.5 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186467794 - 1.8e-11 43.7 0.0 5.1e-11 42.2 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.24 CAMPEP_0186467794 - 0.00032 20.2 0.0 0.00074 19.0 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase SNF2_N PF00176.18 CAMPEP_0186456280 - 1.7e-30 105.8 0.0 2.8e-30 105.1 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186456280 - 1.4e-11 44.1 0.1 3.2e-11 42.9 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0186456280 - 0.00028 20.7 0.6 0.032 14.0 0.0 3.6 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0186456280 - 0.00062 19.3 0.1 0.004 16.6 0.0 2.4 2 1 0 2 2 2 1 DEAD/DEAH box helicase Flavi_DEAD PF07652.9 CAMPEP_0186456280 - 0.033 13.9 0.1 0.21 11.3 0.0 2.1 2 0 0 2 2 2 0 Flavivirus DEAD domain MCRS_N PF13325.1 CAMPEP_0186456280 - 0.091 12.2 2.5 0.19 11.2 1.7 1.4 1 0 0 1 1 1 0 N-terminal region of micro-spherule protein SNF2_N PF00176.18 CAMPEP_0186466102 - 1.9e-55 187.7 0.0 3.3e-55 186.9 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186466102 - 6.6e-15 54.7 0.0 7.7e-14 51.3 0.0 2.5 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0186466102 - 1.1e-09 38.4 0.0 2.8e-09 37.0 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HDA2-3 PF11496.3 CAMPEP_0186466102 - 0.00034 19.5 0.0 0.00082 18.2 0.0 1.6 2 0 0 2 2 2 1 Class II histone deacetylase complex subunits 2 and 3 DUF2075 PF09848.4 CAMPEP_0186466102 - 0.1 11.5 0.0 0.21 10.4 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) SNF2_N PF00176.18 CAMPEP_0186420014 - 3.2e-51 173.8 0.0 9.5e-51 172.3 0.0 1.8 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186420014 - 3.7e-12 45.9 0.0 1.5e-11 43.9 0.1 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain zf-RanBP PF00641.13 CAMPEP_0186420014 - 0.0011 18.0 15.8 0.11 11.6 2.3 2.5 2 0 0 2 2 2 2 Zn-finger in Ran binding protein and others SNF2_N PF00176.18 CAMPEP_0186471416 - 1.9e-62 210.8 0.2 1.6e-31 109.2 0.0 2.5 2 0 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186471416 - 6.6e-14 51.5 0.0 2e-13 49.9 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain zf-PARP PF00645.13 CAMPEP_0186471416 - 7.4e-14 51.7 1.2 3.3e-13 49.6 0.3 2.6 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region SAP PF02037.22 CAMPEP_0186471416 - 5.1e-09 35.4 0.0 1.3e-08 34.1 0.0 1.8 1 0 0 1 1 1 1 SAP domain zf-RING_2 PF13639.1 CAMPEP_0186471416 - 8.9e-09 35.0 3.5 8.9e-09 35.0 2.4 3.0 4 0 0 4 4 2 1 Ring finger domain zf-rbx1 PF12678.2 CAMPEP_0186471416 - 0.0032 17.5 0.7 0.0032 17.5 0.5 2.3 2 0 0 2 2 1 1 RING-H2 zinc finger zf-C3HC4 PF00097.20 CAMPEP_0186471416 - 0.0033 17.0 4.1 0.0033 17.0 2.8 2.8 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-Nse PF11789.3 CAMPEP_0186471416 - 0.036 13.5 1.7 0.096 12.2 1.2 1.7 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-ribbon_3 PF13248.1 CAMPEP_0186471416 - 0.8 8.9 14.0 4.5 6.6 3.4 4.2 4 0 0 4 4 4 0 zinc-ribbon domain zf-C3HC4_2 PF13923.1 CAMPEP_0186471416 - 2.6 8.1 18.7 0.027 14.5 3.0 3.3 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) zf-Apc11 PF12861.2 CAMPEP_0186471416 - 2.9 7.7 9.9 0.073 12.9 0.3 2.6 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger SNF2_N PF00176.18 CAMPEP_0186458468 - 4.2e-57 193.2 1.0 7.1e-57 192.4 0.7 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186458468 - 2.4e-14 52.9 0.0 6.7e-14 51.5 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0186458468 - 4.3e-06 26.6 0.0 1e-05 25.4 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.24 CAMPEP_0186458468 - 1.4e-05 24.6 0.0 2.7e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase UBA PF00627.26 CAMPEP_0186458468 - 0.00031 20.4 0.0 0.0014 18.3 0.0 2.3 2 0 0 2 2 2 1 UBA/TS-N domain 60KD_IMP PF02096.15 CAMPEP_0186458468 - 0.093 12.3 0.0 0.23 11.1 0.0 1.5 1 0 0 1 1 1 0 60Kd inner membrane protein SNF2_N PF00176.18 CAMPEP_0186459224 - 1.8e-52 178.0 0.0 2.2e-51 174.4 0.0 2.4 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.26 CAMPEP_0186459224 - 1.1e-12 47.5 0.0 3.3e-12 46.0 0.0 1.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 CAMPEP_0186459224 - 0.0024 17.7 3.8 0.014 15.2 0.0 3.4 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit