cd /N/dc2/projects/marinovg/2014-06-19-MMETSP/2015-07-10-final-analysis/RAxML; module load raxml/8.0.26; raxml -f a -s /N/dc2/projects/marinovg/2014-06-19-MMETSP/2015-07-10-final-analysis/H2A-variants/H2A-with-other-lineages-more-H2A.Z.muscle.fa -n RAxML-H2A-with-other-lineages-more-H2A.Z.muscle -m PROTGAMMALG -T 16 -p 12345 -N 100 -x 12345
cd /N/dc2/projects/marinovg/2014-06-19-MMETSP/2015-07-10-final-analysis/RAxML; module load raxml/8.0.26; raxml -f a -s /N/dc2/projects/marinovg/2014-06-19-MMETSP/2015-07-10-final-analysis/H2A-variants/H2A-with-other-lineages-more-H2A.Z.muscle.minCov50.fa -n RAxML-H2A-with-other-lineages-more-H2A.Z.muscle.minCov50 -m PROTGAMMALG -T 16 -p 12345 -N 100 -x 12345