585 1373 97 29 0 chr3R 1972 2178 -27902875 - DNAREP1_DM LINE Penelope -370 224 13 4 585 237 153 110 14 chr3R 2174 2247 -27902806 + DNAREP1_DM LINE Penelope 196 275 -319 4 585 22 56 0 0 chr3R 3535 3571 -27901482 + AT_rich Low_complexity Low_complexity 1 36 0 4 585 1322 128 102 38 chr3R 3646 4070 -27900983 - DNAREP1_DM LINE Penelope -1 593 119 4 585 815 132 77 18 chr3R 4068 4238 -27900815 - DNAREP1_DM LINE Penelope -291 303 124 4 585 22 0 0 0 chr3R 5071 5093 -27899960 + AT_rich Low_complexity Low_complexity 1 22 0 4 585 1441 134 220 156 chr3R 6604 7162 -27897891 - DNAREP1_DM LINE Penelope 0 594 1 4 585 2002 123 72 3 chr3R 8723 9058 -27895995 + DNAREP1_DM LINE Penelope 24 381 -213 4 585 1218 144 165 64 chr3R 9077 9374 -27895679 - DNAREP1_DM LINE Penelope -25 569 243 4 585 21 36 0 0 chr3R 9406 9434 -27895619 + AT_rich Low_complexity Low_complexity 1 28 0 4 585 675 234 5 24 chr3R 10720 10930 -27894123 + DNAREP1_DM LINE Penelope 71 276 -318 4 585 326 172 11 33 chr3R 10917 11007 -27894046 + DNAREP1_DM LINE Penelope 203 290 -304 4 585 465 185 270 32 chr3R 11009 11221 -27893832 + DNAREP1_DM LINE Penelope 183 445 -149 4 585 741 122 137 0 chr3R 11258 11389 -27893664 - DNAREP1_DM LINE Penelope 0 594 446 4 585 299 134 449 173 chr3R 11413 11612 -27893441 - DNAREP1_DM LINE Penelope -137 457 256 4 585 786 196 92 36 chr3R 11883 12132 -27892921 - DNAREP1_DM LINE Penelope -221 373 111 4 585 1141 168 138 14 chr3R 12142 12431 -27892622 - DNAREP1_DM LINE Penelope -264 330 6 4 585 13006 63 4 2 chr3R 13432 15097 -27889956 + FB4_DM DNA Tc1 1094 2761 -1328 4 585 22 35 0 0 chr3R 15213 15242 -27889811 + AT_rich Low_complexity Low_complexity 1 29 0 4 585 510 115 177 0 chr3R 16787 16883 -27888170 - DNAREP1_DM LINE Penelope -46 548 436 4 585 7111 30 34 10 chr3R 17533 18421 -27886632 - TC1-2_DM DNA Tc1 0 1644 736 4 585 848 0 0 0 chr3R 18404 18495 -27886558 - TC1-2_DM DNA Tc1 -1553 91 1 4 585 1877 188 20 23 chr3R 18499 18890 -27886163 + Gypsy_LTR LTR Gypsy 1 390 -92 4 585 345 196 23 171 chr3R 18901 19030 -27886023 - DNAREP1_DM LINE Penelope -140 454 345 4 585 2089 134 14 29 chr3R 19154 19500 -27885553 - DNAREP1_DM LINE Penelope -63 531 191 4 585 598 140 142 29 chr3R 19531 19719 -27885334 - DNAREP1_DM LINE Penelope -262 332 117 4 585 366 86 17 17 chr3R 19751 19810 -27885243 - DNAREP1_DM LINE Penelope -535 59 1 4 585 21 71 0 0 chr3R 21977 22019 -27883034 + AT_rich Low_complexity Low_complexity 1 42 0 4 585 32 67 0 0 chr3R 22139 22199 -27882854 + AT_rich Low_complexity Low_complexity 1 60 0 4 585 962 150 60 37 chr3R 22233 22448 -27882605 + DNAREP1_DM LINE Penelope 86 305 -289 4 585 226 68 44 22 chr3R 22477 22522 -27882531 + (CATA)n Simple_repeat Simple_repeat 2 47 0 4 585 305 89 0 35 chr3R 22528 22580 -27882473 - DNAREP1_DM LINE Penelope -57 537 488 4 585 1108 79 140 43 chr3R 22580 22766 -27882287 - DNAREP1_DM LINE Penelope 0 594 391 4 585 21 0 0 0 chr3R 25547 25568 -27879485 + AT_rich Low_complexity Low_complexity 1 21 0 4 585 841 130 124 41 chr3R 25624 25793 -27879260 + DNAREP1_DM LINE Penelope 1 183 -411 4 585 323 208 28 0 chr3R 26188 26260 -27878793 + DNAREP1_DM LINE Penelope 19 92 -502 4 585 4224 38 0 16 chr3R 26312 26824 -27878229 - G5A_DM LINE Jockey 0 2841 2338 4 585 317 139 54 27 chr3R 26817 26891 -27878162 + DNAREP1_DM LINE Penelope 38 113 -481 4 585 1373 72 5 0 chr3R 26917 27116 -27877937 + Rehavkus-1_DY DNA Tc1 5647 5828 0 4 585 387 178 537 0 chr3R 27135 27292 -27877761 + DNAREP1_DM LINE Penelope 179 419 -175 4 585 332 224 60 0 chr3R 27469 27536 -27877517 - DNAREP1_DM LINE Penelope -518 76 6 4 585 334 154 169 60 chr3R 28750 28833 -27876220 - DNAREP1_DM LINE Penelope -2 592 501 4 585 2410 4 4 0 chr3R 31847 32113 -27872940 + MDG3_LTR LTR Gypsy 1 267 0 4 585 45658 1 0 0 chr3R 32112 37099 -27867954 + MDG3_I LTR Gypsy 1 4986 0 4 585 2410 4 4 0 chr3R 37099 37365 -27867688 + MDG3_LTR LTR Gypsy 1 267 0 4 585 185 0 40 0 chr3R 37551 37576 -27867477 + (TAA)n Simple_repeat Simple_repeat 3 28 0 4 585 30 0 0 0 chr3R 37578 37608 -27867445 + AT_rich Low_complexity Low_complexity 1 30 0 4 585 245 105 26 0 chr3R 41609 41647 -27863406 + PROTOP_B DNA P 507 545 -608 4 585 566 60 12 0 chr3R 43444 43527 -27861526 + (TA)n Simple_repeat Simple_repeat 2 85 0 4 585 25 31 0 0 chr3R 44191 44223 -27860830 + AT_rich Low_complexity Low_complexity 1 32 0 4 585 2832 96 40 5 chr3R 48966 49396 -27855657 - FB4_DM DNA Tc1 -1330 2759 2315 4 585 3827 94 69 0 chr3R 49423 49990 -27855063 - FB4_DM DNA Tc1 -2136 1953 1348 4 585 770 103 0 0 chr3R 49991 50107 -27854946 - FB4_DM DNA Tc1 -2864 1225 1110 4 585 28 48 0 0 chr3R 55569 55611 -27849442 + AT_rich Low_complexity Low_complexity 1 42 0 4 585 21 82 0 0 chr3R 55688 55737 -27849316 + AT_rich Low_complexity Low_complexity 1 49 0 4 585 187 103 51 0 chr3R 69324 69363 -27835690 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 585 719 104 151 8 chr3R 71352 71478 -27833575 + DNAREP1_DM LINE Penelope 1 144 -450 4 585 417 228 0 0 chr3R 71497 71576 -27833477 + DNAREP1_DM LINE Penelope 373 451 -143 4 585 286 100 25 0 chr3R 71555 71595 -27833458 - DNAREP1_DM LINE Penelope -128 466 426 4 585 230 167 0 45 chr3R 71706 71750 -27833303 - DNAREP1_DM LINE Penelope -258 336 295 4 585 244 185 19 0 chr3R 71743 71797 -27833256 - DNAREP1_DM LINE Penelope -497 97 43 4 585 303 233 132 0 chr3R 71915 72044 -27833009 + P_DG DNA P 2743 2888 0 4 585 898 53 183 0 chr3R 71932 72063 -27832990 - DNAREP1_DM LINE Penelope -9 585 431 4 585 232 206 150 41 chr3R 72109 72256 -27832797 + TRANSPAC_I LTR Gypsy 1360 1522 -3068 4 585 209 161 0 0 chr3R 73073 73104 -27831949 + C-rich Low_complexity Low_complexity 3 33 0 4 585 22 0 0 0 chr3R 73964 73986 -27831067 + AT_rich Low_complexity Low_complexity 1 22 0 4 585 37 23 0 0 chr3R 79022 79066 -27825987 + AT_rich Low_complexity Low_complexity 1 44 0 4 585 217 178 22 0 chr3R 81658 81703 -27823350 + (CATA)n Simple_repeat Simple_repeat 3 48 0 4 585 2068 108 114 7 chr3R 81740 82144 -27822909 - DNAREP1_DM LINE Penelope 0 594 8 4 585 180 111 0 0 chr3R 83285 83312 -27821741 + (TTCTCC)n Simple_repeat Simple_repeat 1 27 0 4 585 322 57 38 0 chr3R 84297 84350 -27820703 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 585 5958 0 6 1 chr3R 84350 85004 -27820049 + QUASIMODO_LTR LTR Gypsy 2 658 0 4 585 53870 3 0 0 chr3R 85004 91064 -27813989 + QUASIMODO_I LTR Gypsy 1 6060 0 4 585 5818 0 6 2 chr3R 91064 91704 -27813349 + QUASIMODO_LTR LTR Gypsy 1 643 -15 4 585 200 114 0 28 chr3R 91714 91750 -27813303 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 4 585 258 153 31 92 chr3R 92380 92445 -27812608 + G6_DM LINE Jockey 1961 2021 -21 4 585 461 174 104 65 chr3R 94052 94206 -27810847 + DNAREP1_DM LINE Penelope 20 179 -415 4 585 2254 106 135 26 chr3R 94227 94874 -27810179 + DNAREP1_DM LINE Penelope 1 594 0 4 585 406 255 67 7 chr3R 94742 94892 -27810161 - P_DG DNA P 0 2888 2730 4 585 271 152 0 0 chr3R 94960 95006 -27810047 + DNAREP1_DM LINE Penelope 547 592 -2 4 585 1012 215 65 36 chr3R 96134 96511 -27808542 + DNAREP1_DM LINE Penelope 10 492 -102 4 585 2505 0 0 4 chr3R 96511 96787 -27808266 - BURDOCK_LTR LTR Gypsy 0 275 1 4 585 54206 2 0 0 chr3R 96788 102648 -27802405 - BURDOCK_I LTR Gypsy 0 5860 1 4 585 2505 0 0 4 chr3R 102648 102924 -27802129 - BURDOCK_LTR LTR Gypsy 0 275 1 4 585 273 172 0 49 chr3R 102925 102986 -27802067 + DNAREP1_DM LINE Penelope 500 557 -37 4 585 742 199 123 35 chr3R 103665 103925 -27801128 - DNAREP1_DM LINE Penelope -241 353 71 4 585 973 208 80 34 chr3R 104615 104946 -27800107 + DNAREP1_DM LINE Penelope 92 415 -179 4 585 318 145 194 0 chr3R 104974 105036 -27800017 + DNAREP1_DM LINE Penelope 521 594 0 4 585 23 0 0 0 chr3R 105438 105461 -27799592 + AT_rich Low_complexity Low_complexity 1 23 0 4 585 269 254 0 0 chr3R 107081 107152 -27797901 + GA-rich Low_complexity Low_complexity 1 71 0 4 585 238 159 23 0 chr3R 108998 109042 -27796011 - QUASIMODO_I LTR Gypsy -2991 3069 3025 4 585 25 65 0 0 chr3R 112463 112509 -27792544 + AT_rich Low_complexity Low_complexity 1 46 0 4 585 270 229 27 40 chr3R 114520 114670 -27790383 + (CTA)n Simple_repeat Simple_repeat 3 150 0 4 585 200 189 0 0 chr3R 121873 121910 -27783143 + (CCCTAA)n Simple_repeat Simple_repeat 5 41 0 4 585 191 146 0 24 chr3R 125387 125429 -27779624 + CT-rich Low_complexity Low_complexity 2 42 0 4 585 195 146 0 0 chr3R 125533 125574 -27779479 + (CAA)n Simple_repeat Simple_repeat 2 42 0 4 585 270 210 25 0 chr3R 125645 125726 -27779327 + (CAA)n Simple_repeat Simple_repeat 1 83 0 4 585 918 122 0 0 chr3R 126849 126997 -27778056 + (TA)n Simple_repeat Simple_repeat 2 149 0 4 585 255 265 12 0 chr3R 127430 127513 -27777540 + (TCTCTG)n Simple_repeat Simple_repeat 5 88 0 4 585 210 118 0 0 chr3R 130248 130282 -27774771 + (TATTG)n Simple_repeat Simple_repeat 2 35 0 4 586 1962 86 202 80 chr3R 132422 132950 -27772103 - DNAREP1_DM LINE Penelope 0 594 2 4 586 24 0 0 0 chr3R 136778 136802 -27768251 + AT_rich Low_complexity Low_complexity 1 24 0 4 586 22 35 0 0 chr3R 136961 136990 -27768063 + AT_rich Low_complexity Low_complexity 1 29 0 4 586 31 58 0 0 chr3R 137080 137132 -27767921 + AT_rich Low_complexity Low_complexity 1 52 0 4 586 21 36 0 0 chr3R 140017 140045 -27765008 + AT_rich Low_complexity Low_complexity 1 28 0 4 586 238 91 0 0 chr3R 140224 140257 -27764796 - PROTOP_B DNA P -617 536 504 4 586 253 243 14 14 chr3R 143375 143446 -27761607 + (TTG)n Simple_repeat Simple_repeat 3 73 0 4 586 238 247 170 30 chr3R 146334 146434 -27758619 - DNAREP1_DM LINE Penelope -28 566 453 4 586 466 154 82 11 chr3R 148456 148554 -27756499 + DNAREP1_DM LINE Penelope 402 491 -103 4 586 225 241 0 0 chr3R 149221 149275 -27755778 + (CAG)n Simple_repeat Simple_repeat 1 54 0 4 586 22 70 0 0 chr3R 152030 152073 -27752980 + AT_rich Low_complexity Low_complexity 1 43 0 4 586 25 0 0 0 chr3R 152590 152615 -27752438 + AT_rich Low_complexity Low_complexity 1 25 0 4 586 23 33 0 0 chr3R 153384 153414 -27751639 + AT_rich Low_complexity Low_complexity 1 30 0 4 586 22 35 0 0 chr3R 153800 153829 -27751224 + AT_rich Low_complexity Low_complexity 1 29 0 4 586 387 229 63 18 chr3R 156109 156220 -27748833 + DNAREP1_DM LINE Penelope 24 139 -455 4 586 972 104 117 71 chr3R 156218 156414 -27748639 + DNAREP1_DM LINE Penelope 390 594 0 4 586 404 200 112 144 chr3R 156416 156603 -27748450 + DNAREP1_DM LINE Penelope 267 447 -147 4 586 39 0 0 0 chr3R 157145 157184 -27747869 + AT_rich Low_complexity Low_complexity 1 39 0 4 586 1772 54 116 0 chr3R 160100 160342 -27744711 - DNAREP1_DM LINE Penelope 0 594 325 4 586 391 111 0 0 chr3R 160341 160395 -27744658 - DNAREP1_DM LINE Penelope -540 54 1 4 586 25 83 0 0 chr3R 160559 160619 -27744434 + AT_rich Low_complexity Low_complexity 1 60 0 4 586 23 0 0 0 chr3R 164700 164723 -27740330 + AT_rich Low_complexity Low_complexity 1 23 0 4 586 26 50 0 0 chr3R 168428 168468 -27736585 + AT_rich Low_complexity Low_complexity 1 40 0 4 586 2372 152 60 22 chr3R 168723 169226 -27735827 + DNAREP1_DM LINE Penelope 117 594 0 4 586 305 330 0 0 chr3R 169596 169696 -27735357 + DNAREP1_DM LINE Penelope 390 489 -105 4 586 218 245 0 0 chr3R 171760 171809 -27733244 + (CGG)n Simple_repeat Simple_repeat 2 50 0 4 586 267 157 0 0 chr3R 172453 172504 -27732549 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 586 24 32 0 0 chr3R 175524 175555 -27729498 + AT_rich Low_complexity Low_complexity 1 31 0 4 586 1916 119 136 46 chr3R 176794 177244 -27727809 + DNAREP1_DM LINE Penelope 1 594 0 4 586 34 24 0 0 chr3R 177260 177301 -27727752 + AT_rich Low_complexity Low_complexity 1 41 0 4 586 515 171 0 0 chr3R 177646 177728 -27727325 + DNAREP1_DM LINE Penelope 1 82 -512 4 586 2290 42 7 37 chr3R 180867 181163 -27723890 - Gypsy4_LTR LTR Gypsy 0 287 1 4 586 275 200 14 0 chr3R 181427 181497 -27723556 + DNAREP1_DM LINE Penelope 185 255 -339 4 586 707 211 69 40 chr3R 181640 181842 -27723211 + DNAREP1_DM LINE Penelope 264 471 -123 4 586 431 121 15 0 chr3R 182154 182220 -27722833 + DNAREP1_DM LINE Penelope 1 67 -527 4 586 638 193 124 11 chr3R 182232 182410 -27722643 + DNAREP1_DM LINE Penelope 242 439 -155 4 586 450 254 84 34 chr3R 182469 182648 -27722405 + DMCR1A LINE CR1 3408 3595 -875 4 586 973 168 133 47 chr3R 182647 182903 -27722150 - DNAREP1_DM LINE Penelope -11 583 306 4 586 39 38 0 0 chr3R 182908 182961 -27722092 + AT_rich Low_complexity Low_complexity 1 53 0 4 586 374 209 50 50 chr3R 183010 183151 -27721902 - DNAREP1_DM LINE Penelope -453 141 1 4 586 228 222 0 36 chr3R 183739 183795 -27721258 + BARI_DM DNA Tc1 1176 1229 -499 4 586 24 32 0 0 chr3R 184107 184138 -27720915 + AT_rich Low_complexity Low_complexity 1 31 0 4 586 322 182 11 15 chr3R 187222 187296 -27717757 - DNAREP1_DM LINE Penelope -99 495 433 4 586 267 203 130 0 chr3R 187497 187566 -27717487 - DNAREP1_DM LINE Penelope -132 462 385 4 586 227 267 0 16 chr3R 187633 187694 -27717359 - DNAREP1_DM LINE Penelope -508 86 27 4 586 1722 75 183 52 chr3R 187743 188119 -27716934 - DNAREP1_DM LINE Penelope -42 552 1 4 586 4022 0 0 0 chr3R 192534 192962 -27712091 - ROO_LTR LTR Pao 0 428 1 4 586 13812 0 1 0 chr3R 192962 194479 -27710574 - ROO_I LTR Pao 0 8256 6738 4 586 53922 2 0 3 chr3R 194479 200431 -27704622 - ROO_I LTR Pao -2320 5936 1 4 586 4022 0 0 0 chr3R 200431 200859 -27704194 - ROO_LTR LTR Pao 0 428 1 4 586 216 216 0 75 chr3R 201999 202079 -27702974 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 4 586 27 29 0 0 chr3R 202474 202508 -27702545 + AT_rich Low_complexity Low_complexity 1 34 0 4 586 305 147 169 42 chr3R 203461 203532 -27701521 - DNAREP1_DM LINE Penelope -384 210 131 4 586 2791 132 103 10 chr3R 203796 204279 -27700774 + DNAREP1_DM LINE Penelope 67 594 0 4 586 373 243 41 41 chr3R 204148 204294 -27700759 - P_DG DNA P 0 2888 2743 4 586 23 33 0 0 chr3R 206116 206146 -27698907 + AT_rich Low_complexity Low_complexity 1 30 0 4 586 23 33 0 0 chr3R 207088 207118 -27697935 + AT_rich Low_complexity Low_complexity 1 30 0 4 586 38 39 0 0 chr3R 210379 210431 -27694622 + AT_rich Low_complexity Low_complexity 1 52 0 4 586 432 149 0 0 chr3R 212854 212921 -27692132 - DNAREP1_DM LINE Penelope 0 594 528 4 586 386 49 262 0 chr3R 212924 212985 -27692068 - DNAREP1_DM LINE Penelope -113 481 405 4 586 304 211 0 40 chr3R 213096 213170 -27691883 + DNAREP1_DM LINE Penelope 435 505 -89 4 586 21 0 0 0 chr3R 218051 218072 -27686981 + AT_rich Low_complexity Low_complexity 1 21 0 4 586 372 206 295 26 chr3R 218343 218499 -27686554 + DNAREP1_DM LINE Penelope 387 584 -10 4 586 25 65 0 0 chr3R 224034 224080 -27680973 + AT_rich Low_complexity Low_complexity 1 46 0 4 586 24 0 0 0 chr3R 226097 226121 -27678932 + AT_rich Low_complexity Low_complexity 1 24 0 4 586 2826 128 105 34 chr3R 227759 228311 -27676742 - DNAREP1_DM LINE Penelope -3 591 1 4 586 27 62 0 0 chr3R 228480 228528 -27676525 + AT_rich Low_complexity Low_complexity 1 48 0 4 586 23 0 0 0 chr3R 232699 232722 -27672331 + AT_rich Low_complexity Low_complexity 1 23 0 4 586 212 224 15 15 chr3R 232828 232896 -27672157 + A-rich Low_complexity Low_complexity 3 70 0 4 586 25 0 0 0 chr3R 234179 234204 -27670849 + AT_rich Low_complexity Low_complexity 1 25 0 4 586 38525 1 0 0 chr3R 234204 238426 -27666627 - DOC6_DM LINE Jockey 0 4222 1 4 586 636 103 41 0 chr3R 239717 239814 -27665239 + DNAREP1_DM LINE Penelope 1 101 -493 4 586 1446 132 77 28 chr3R 239837 240155 -27664898 + DNAREP1_DM LINE Penelope 214 586 -8 4 586 24 0 0 0 chr3R 241296 241320 -27663733 + AT_rich Low_complexity Low_complexity 1 24 0 4 586 21 0 0 0 chr3R 241956 241977 -27663076 + AT_rich Low_complexity Low_complexity 1 21 0 4 586 645 193 376 51 chr3R 243435 243781 -27661272 - DNAREP1_DM LINE Penelope -134 460 2 4 586 23 54 0 0 chr3R 243791 243828 -27661225 + AT_rich Low_complexity Low_complexity 1 37 0 4 586 24 0 0 0 chr3R 245834 245858 -27659195 + AT_rich Low_complexity Low_complexity 1 24 0 4 586 225 208 170 0 chr3R 246063 246116 -27658937 + DNAREP1_DM LINE Penelope 1 62 -532 4 586 277 244 0 25 chr3R 246888 246965 -27658088 + DNAREP1_DM LINE Penelope 435 509 -85 4 586 2978 29 0 14 chr3R 246965 247321 -27657732 + ROOA_LTR LTR Pao 1 351 -35 4 586 25 0 0 0 chr3R 247899 247924 -27657129 + AT_rich Low_complexity Low_complexity 1 25 0 4 586 30 0 0 0 chr3R 248366 248396 -27656657 + AT_rich Low_complexity Low_complexity 1 30 0 4 586 23 0 0 0 chr3R 249135 249158 -27655895 + AT_rich Low_complexity Low_complexity 1 23 0 4 586 22 0 0 0 chr3R 252864 252886 -27652167 + AT_rich Low_complexity Low_complexity 1 22 0 4 586 26 64 0 0 chr3R 260010 260057 -27644996 + AT_rich Low_complexity Low_complexity 1 47 0 4 586 274 167 37 0 chr3R 260145 260199 -27644854 - DNAREP1_DM LINE Penelope -163 431 376 4 586 23 33 0 0 chr3R 260335 260365 -27644688 + AT_rich Low_complexity Low_complexity 1 30 0 4 587 198 103 0 0 chr3R 263451 263480 -27641573 + (CAG)n Simple_repeat Simple_repeat 1 29 0 4 587 267 175 0 0 chr3R 266282 266362 -27638691 + ROO_I LTR Pao 641 720 -7536 4 587 22 0 0 0 chr3R 270544 270566 -27634487 + AT_rich Low_complexity Low_complexity 1 22 0 4 587 23 33 0 0 chr3R 279930 279960 -27625093 + AT_rich Low_complexity Low_complexity 1 30 0 4 587 195 186 0 0 chr3R 281214 281257 -27623796 + (ATG)n Simple_repeat Simple_repeat 1 43 0 4 587 281 207 17 0 chr3R 285354 285412 -27619641 + DNAREP1_DM LINE Penelope 1 59 -535 4 587 270 136 0 0 chr3R 286777 286821 -27618232 + (TA)n Simple_repeat Simple_repeat 1 44 0 4 587 235 118 0 0 chr3R 289989 290023 -27615030 + DNAREP1_DM LINE Penelope 559 592 -2 4 587 210 118 0 0 chr3R 295431 295465 -27609588 + (ATGGTG)n Simple_repeat Simple_repeat 3 36 0 4 587 24 0 0 0 chr3R 297793 297817 -27607236 + AT_rich Low_complexity Low_complexity 1 24 0 4 587 189 74 0 0 chr3R 298520 298547 -27606506 + (GA)n Simple_repeat Simple_repeat 2 28 0 4 587 240 177 16 16 chr3R 298948 299011 -27606042 + (TATAA)n Simple_repeat Simple_repeat 2 64 0 4 587 41 21 0 0 chr3R 300309 300357 -27604696 + AT_rich Low_complexity Low_complexity 1 48 0 4 587 29 0 0 0 chr3R 301067 301096 -27603957 + AT_rich Low_complexity Low_complexity 1 29 0 4 587 240 170 64 0 chr3R 302117 302164 -27602889 - DNAREP1_DM LINE Penelope -6 588 539 4 587 234 231 149 32 chr3R 302173 302267 -27602786 - DNAREP1_DM LINE Penelope -486 108 4 4 587 362 39 0 38 chr3R 303371 303424 -27601629 + (CATA)n Simple_repeat Simple_repeat 2 52 0 4 587 504 256 52 29 chr3R 305589 305762 -27599291 + DNAREP1_DM LINE Penelope 22 198 -396 4 587 271 161 318 11 chr3R 305963 306051 -27599002 + DNAREP1_DM LINE Penelope 460 574 -20 4 587 325 277 91 16 chr3R 306209 306330 -27598723 + DNAREP1_DM LINE Penelope 443 572 -22 4 587 30 45 0 0 chr3R 306332 306376 -27598677 + AT_rich Low_complexity Low_complexity 1 44 0 4 587 409 179 198 35 chr3R 309882 309998 -27595055 - DNAREP1_DM LINE Penelope 0 594 460 4 587 535 137 118 0 chr3R 310014 310116 -27594937 - DMCR1A LINE CR1 -256 4214 4101 4 587 21 0 0 0 chr3R 310595 310616 -27594437 + AT_rich Low_complexity Low_complexity 1 21 0 4 587 33 66 0 0 chr3R 310628 310689 -27594364 + AT_rich Low_complexity Low_complexity 1 61 0 4 587 354 211 0 0 chr3R 312900 313009 -27592044 + GA-rich Low_complexity Low_complexity 5 113 0 4 587 6207 73 194 4 chr3R 313716 314890 -27590163 + TC1-2_DM DNA Tc1 63 1458 -186 4 587 226 67 0 0 chr3R 314888 314918 -27590135 + TC1-2_DM DNA Tc1 1615 1644 0 4 587 859 117 24 131 chr3R 315353 315559 -27589494 + BS3_DM LINE Jockey 1607 1790 0 4 587 584 219 95 20 chr3R 315964 316198 -27588855 + DNAREP1_DM LINE Penelope 1 380 -214 4 587 5837 94 47 0 chr3R 316331 317159 -27587894 + S_DM DNA Tc1 581 1447 -289 4 587 1054 60 0 7 chr3R 317156 317308 -27587745 + S_DM DNA Tc1 1586 1736 0 4 587 21 0 0 0 chr3R 318282 318303 -27586750 + AT_rich Low_complexity Low_complexity 1 21 0 4 587 235 236 0 0 chr3R 321972 322044 -27583009 + DNAREP1_DM LINE Penelope 501 572 -22 4 587 25 0 0 0 chr3R 323197 323222 -27581831 + AT_rich Low_complexity Low_complexity 1 25 0 4 587 14960 31 19 4 chr3R 323625 325400 -27579653 - FW2_DM LINE Jockey 0 3961 2161 4 587 1844 5 14 23 chr3R 325400 325617 -27579436 - FW2_DM LINE Jockey -1937 2024 1810 4 587 13905 33 19 4 chr3R 325614 327294 -27577759 - FW2_DM LINE Jockey -2256 1705 1 4 587 27 0 0 0 chr3R 327402 327429 -27577624 + AT_rich Low_complexity Low_complexity 1 27 0 4 587 483 206 92 58 chr3R 327498 327653 -27577400 + DNAREP1_DM LINE Penelope 368 495 -99 4 587 1170 132 364 35 chr3R 329856 330291 -27574762 + DNAREP1_DM LINE Penelope 1 578 -16 4 587 26 50 0 0 chr3R 332107 332147 -27572906 + AT_rich Low_complexity Low_complexity 1 40 0 4 587 1261 108 115 14 chr3R 332207 332424 -27572629 - DNAREP1_DM LINE Penelope -97 497 259 4 587 7915 55 71 8 chr3R 332410 333503 -27571550 - Jockey2 LINE Jockey -5 3423 2262 4 587 261 100 180 0 chr3R 333570 333620 -27571433 - DNAREP1_DM LINE Penelope -534 60 2 4 587 286 224 0 0 chr3R 333687 333745 -27571308 - DNAREP1_DM LINE Penelope -517 77 20 4 587 237 0 0 0 chr3R 334817 334843 -27570210 - DNAREP1_DM LINE Penelope -1 593 568 4 587 1301 140 63 17 chr3R 334898 335137 -27569916 - DNAREP1_DM LINE Penelope -20 574 325 4 587 1555 117 11 43 chr3R 337553 337831 -27567222 + TC1-2_DM DNA Tc1 11 279 -1365 4 587 29 94 0 0 chr3R 339899 339984 -27565069 + AT_rich Low_complexity Low_complexity 1 85 0 4 587 1136 61 183 12 chr3R 340954 341200 -27563853 - FB4_DM DNA Tc1 -1329 2760 2473 4 587 8332 94 18 21 chr3R 341204 342461 -27562592 - FB4_DM DNA Tc1 -1729 2360 1107 4 587 25 31 0 0 chr3R 342768 342800 -27562253 + AT_rich Low_complexity Low_complexity 1 32 0 4 587 197 86 57 0 chr3R 342983 343018 -27562035 + (CTTAA)n Simple_repeat Simple_repeat 3 39 0 4 587 3365 102 111 12 chr3R 343119 343977 -27561076 + PROTOP DNA P 1051 1993 -2487 4 587 227 128 0 0 chr3R 343975 344010 -27561043 + PROTOP DNA P 2167 2201 -2279 4 587 1910 42 0 28 chr3R 344010 344257 -27560796 + LOOPER1_DM DNA PiggyBac 1 240 -1641 4 587 261 33 0 0 chr3R 344259 344289 -27560764 - S_DM DNA Tc1 0 1736 1707 4 587 1753 81 4 4 chr3R 344297 344570 -27560483 - S_DM DNA Tc1 -1463 273 1 4 587 5174 37 0 40 chr3R 344571 345251 -27559802 + LOOPER1_DM DNA PiggyBac 242 894 -987 4 587 1428 72 68 0 chr3R 345246 345468 -27559585 + LOOPER1_DM DNA PiggyBac 1141 1377 -504 4 587 1407 85 0 0 chr3R 345490 345713 -27559340 + S_DM DNA Tc1 1514 1736 0 4 587 21 71 0 0 chr3R 345793 345835 -27559218 + AT_rich Low_complexity Low_complexity 1 42 0 4 587 29 0 0 0 chr3R 346355 346384 -27558669 + AT_rich Low_complexity Low_complexity 1 29 0 4 587 24 32 0 0 chr3R 346843 346874 -27558179 + AT_rich Low_complexity Low_complexity 1 31 0 4 587 236 132 26 0 chr3R 346993 347031 -27558022 - DNAREP1_DM LINE Penelope -544 50 12 4 587 24 77 0 0 chr3R 347572 347624 -27557429 + AT_rich Low_complexity Low_complexity 1 52 0 4 587 759 203 192 7 chr3R 349258 349555 -27555498 + DMCR1A LINE CR1 7 358 -4112 4 587 719 222 171 23 chr3R 349582 349840 -27555213 + DMCR1A LINE CR1 493 788 -3682 4 587 28 0 0 0 chr3R 350506 350534 -27554519 + AT_rich Low_complexity Low_complexity 1 28 0 4 587 327 250 33 0 chr3R 350812 350904 -27554149 - BARI1 DNA Tc1 -691 1059 965 4 587 743 234 66 99 chr3R 350918 351250 -27553803 - DNAREP1_DM LINE Penelope -20 574 254 4 587 257 192 0 0 chr3R 351256 351308 -27553745 - DNAREP1_DM LINE Penelope -542 52 1 4 587 346 201 250 0 chr3R 351305 351449 -27553604 - BARI1 DNA Tc1 -1223 527 348 4 587 626 102 102 0 chr3R 351758 351856 -27553197 - DNAREP1_DM LINE Penelope -482 112 5 4 587 22 0 0 0 chr3R 354355 354377 -27550676 + AT_rich Low_complexity Low_complexity 1 22 0 4 587 344 214 48 0 chr3R 354616 354700 -27550353 - DNAREP1_DM LINE Penelope -486 108 21 4 587 23 0 0 0 chr3R 355457 355480 -27549573 + AT_rich Low_complexity Low_complexity 1 23 0 4 587 437 233 53 23 chr3R 355626 355758 -27549295 + DNAREP1_DM LINE Penelope 457 592 -2 4 587 216 67 0 0 chr3R 356549 356579 -27548474 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 587 188 137 0 19 chr3R 356927 356979 -27548074 + (ACTG)n Simple_repeat Simple_repeat 4 54 0 4 587 456 235 250 21 chr3R 357232 357464 -27547589 + DNAREP1_DM LINE Penelope 131 415 -179 4 587 291 231 0 71 chr3R 358349 358431 -27546622 + DNAREP1_DM LINE Penelope 415 490 -104 4 587 349 74 275 14 chr3R 358431 358500 -27546553 + S_DM DNA Tc1 1 87 -1649 4 587 275 164 162 14 chr3R 361751 361825 -27543228 + DNAREP1_DM LINE Penelope 414 498 -96 4 587 265 132 0 0 chr3R 361837 361875 -27543178 + DNAREP1_DM LINE Penelope 556 593 -1 4 587 272 182 42 74 chr3R 363662 363757 -27541296 - ROO_I LTR Pao -7514 742 651 4 587 228 220 0 0 chr3R 363989 364048 -27541005 + GA-rich Low_complexity Low_complexity 1 59 0 4 587 7021 75 38 77 chr3R 364655 365855 -27539198 - PROTOP_B DNA P 0 1153 1 4 587 311 50 0 0 chr3R 365931 365971 -27539082 - DNAREP1_DM LINE Penelope -554 40 1 4 587 29 28 0 0 chr3R 367043 367079 -27537974 + AT_rich Low_complexity Low_complexity 1 36 0 4 587 678 162 0 0 chr3R 367832 368011 -27537042 + (CAA)n Simple_repeat Simple_repeat 2 180 0 4 587 432 143 0 0 chr3R 368034 368132 -27536921 + (CAA)n Simple_repeat Simple_repeat 3 100 0 4 587 386 78 0 0 chr3R 370769 370820 -27534233 - DNAREP1_DM LINE Penelope 0 594 544 4 587 467 195 0 0 chr3R 370832 370919 -27534134 - DNAREP1_DM LINE Penelope -156 438 352 4 587 688 158 150 7 chr3R 370915 371068 -27533985 - DNAREP1_DM LINE Penelope -418 176 2 4 587 257 299 0 0 chr3R 371501 371578 -27533475 - DNAREP1_DM LINE Penelope -517 77 1 4 587 637 179 186 0 chr3R 372677 372817 -27532236 + DMRT1B LINE R1 4899 5064 -119 4 587 242 184 0 20 chr3R 372861 372911 -27532142 + DMRT1C LINE R1 166 214 -5229 4 587 318 106 0 0 chr3R 373276 373323 -27531730 - DNAREP1_DM LINE Penelope -365 229 183 4 587 388 150 0 0 chr3R 373324 373384 -27531669 - DNAREP1_DM LINE Penelope -533 61 2 4 587 345 132 0 0 chr3R 373519 373572 -27531481 + DNAREP1_DM LINE Penelope 37 89 -505 4 587 236 20 75 38 chr3R 373576 373629 -27531424 + (TATAA)n Simple_repeat Simple_repeat 5 59 0 4 587 1552 150 166 73 chr3R 373653 374099 -27530954 + DNAREP1_DM LINE Penelope 108 594 0 4 587 302 261 72 0 chr3R 374578 374689 -27530364 - DNAREP1_DM LINE Penelope -20 574 456 4 587 44 0 0 0 chr3R 374972 375016 -27530037 + AT_rich Low_complexity Low_complexity 1 44 0 4 587 287 326 75 0 chr3R 375174 375321 -27529732 + DMCR1A LINE CR1 1851 2008 -2462 4 587 807 114 158 7 chr3R 378808 378990 -27526063 + DNAREP1_DM LINE Penelope 117 332 -262 4 587 26 0 0 0 chr3R 379142 379168 -27525885 + AT_rich Low_complexity Low_complexity 1 26 0 4 587 24 32 0 0 chr3R 381328 381359 -27523694 + AT_rich Low_complexity Low_complexity 1 31 0 4 587 1099 199 244 63 chr3R 381419 381862 -27523191 + DNAREP1_DM LINE Penelope 5 527 -67 4 587 1440 100 18 18 chr3R 385595 385820 -27519233 - FB4_DM DNA Tc1 -1475 2614 2390 4 587 600 175 0 9 chr3R 385821 385936 -27519117 - FB4_DM DNA Tc1 -1813 2276 2163 4 587 1912 134 131 2 chr3R 385972 386581 -27518472 - FB4_DM DNA Tc1 -2179 1910 1223 4 587 484 105 2 283 chr3R 387906 388079 -27516974 + DNAREP1_DM LINE Penelope 123 377 -217 4 587 3803 44 27 4 chr3R 388617 389100 -27515953 + S2_DM DNA Tc1 634 1127 -608 4 587 3080 49 30 28 chr3R 389099 389560 -27515493 + S2_DM DNA Tc1 1274 1735 0 4 587 2280 19 0 0 chr3R 391096 391354 -27513699 + PROTOP_A DNA P 848 1105 0 4 587 273 120 20 0 chr3R 391354 391404 -27513649 + TC1-2_DM DNA Tc1 409 459 -1185 4 587 683 110 83 17 chr3R 391399 391519 -27513534 + TC1-2_DM DNA Tc1 1036 1163 -481 4 587 6900 45 69 19 chr3R 391521 392483 -27512570 + TRANSIB3 DNA Transib 1 1010 -1873 4 587 3239 47 72 9 chr3R 392480 392936 -27512117 + TRANSIB3 DNA Transib 2399 2883 0 4 588 2683 53 64 5 chr3R 396467 396843 -27508210 + BARI1 DNA Tc1 1286 1683 -67 4 588 1416 127 18 90 chr3R 396901 397178 -27507875 + HOBO DNA hAT 1 257 -2759 4 588 245 125 0 0 chr3R 397206 397246 -27507807 + PROTOP_B DNA P 47 86 -1067 4 588 243 95 81 0 chr3R 397281 397355 -27507698 + (TA)n Simple_repeat Simple_repeat 1 80 0 4 588 897 60 13 57 chr3R 397357 397515 -27507538 + PROTOP_B DNA P 313 463 -690 4 588 1685 155 142 3 chr3R 397516 397853 -27507200 + HOBO DNA hAT 2632 3015 -1 4 588 611 271 40 40 chr3R 400047 400473 -27504580 + Transib5 DNA Transib 1 426 -2575 4 588 877 179 13 29 chr3R 401148 401432 -27503621 - HELENA_RT LINE Jockey -2 1315 1210 4 588 2448 126 3 0 chr3R 401640 402020 -27503033 - MINOS DNA Tc1 -351 1424 1044 4 588 622 156 98 0 chr3R 402056 402178 -27502875 + PROTOP_B DNA P 79 212 -941 4 588 23 0 0 0 chr3R 402873 402896 -27502157 + AT_rich Low_complexity Low_complexity 1 23 0 4 588 21 57 0 0 chr3R 403093 403128 -27501925 + AT_rich Low_complexity Low_complexity 1 35 0 4 588 401 118 44 0 chr3R 403356 403424 -27501629 - DNAREP1_DM LINE Penelope -279 315 245 4 588 21 0 0 0 chr3R 405184 405205 -27499848 + AT_rich Low_complexity Low_complexity 1 21 0 4 588 258 226 0 0 chr3R 405260 405313 -27499740 - Transib5 DNA Transib -612 2389 2337 4 588 5658 26 94 43 chr3R 405386 406627 -27498426 - DMCR1A LINE CR1 0 4470 3167 4 588 640 298 43 38 chr3R 406752 407254 -27497799 - Transib5 DNA Transib -1048 1953 1422 4 588 6784 4 7 0 chr3R 408018 408767 -27496286 + BS4_DM LINE Jockey 1 754 0 4 588 24 67 0 0 chr3R 408777 408822 -27496231 + AT_rich Low_complexity Low_complexity 1 45 0 4 588 1254 161 40 67 chr3R 408893 409193 -27495860 + DNAREP1_DM LINE Penelope 107 398 -196 4 588 62 36 0 0 chr3R 409276 409359 -27495694 + AT_rich Low_complexity Low_complexity 1 83 0 4 588 191 32 0 61 chr3R 409604 409637 -27495416 + (TATAA)n Simple_repeat Simple_repeat 4 34 0 4 588 278 271 0 0 chr3R 411337 411407 -27493646 + DNAREP1_DM LINE Penelope 515 584 -10 4 588 700 213 198 16 chr3R 411718 411966 -27493087 + DNAREP1_DM LINE Penelope 3 295 -299 4 588 405 138 11 44 chr3R 411975 412066 -27492987 + DNAREP1_DM LINE Penelope 482 569 -25 4 588 352 164 0 0 chr3R 412204 412265 -27492788 - DNAREP1_DM LINE Penelope -532 62 2 4 588 365 125 0 0 chr3R 412263 412319 -27492734 - DNAREP1_DM LINE Penelope 0 594 539 4 588 455 55 0 0 chr3R 412347 412402 -27492651 - DNAREP1_DM LINE Penelope -151 443 389 4 588 457 215 37 9 chr3R 412399 412507 -27492546 - DNAREP1_DM LINE Penelope -390 204 94 4 588 446 193 156 0 chr3R 412791 412900 -27492153 - DNAREP1_DM LINE Penelope -98 496 371 4 588 318 71 0 0 chr3R 413600 413642 -27491411 - DNAREP1_DM LINE Penelope 0 594 553 4 588 216 86 0 0 chr3R 413697 413732 -27491321 + (TTA)n Simple_repeat Simple_repeat 1 35 0 4 588 478 101 174 33 chr3R 413746 413838 -27491215 - DMRP1 Unknown Unknown -216 130 26 4 588 294 175 0 34 chr3R 414158 414217 -27490836 - DNAREP1_DM LINE Penelope -120 474 418 4 588 2096 113 99 127 chr3R 415182 415678 -27489375 - DNAREP1_DM LINE Penelope -112 482 1 4 588 815 58 10 0 chr3R 416944 417048 -27488005 + DNAREP1_DM LINE Penelope 2 106 -488 4 588 338 0 0 0 chr3R 417071 417111 -27487942 + DNAREP1_DM LINE Penelope 534 573 -21 4 588 253 157 20 0 chr3R 417110 417161 -27487892 + PROTOP_B DNA P 506 557 -596 4 588 849 316 151 20 chr3R 417815 418271 -27486782 + Gypsy12_I LTR Gypsy 3980 4498 -1048 4 588 207 0 0 0 chr3R 418271 418294 -27486759 + (CTATA)n Simple_repeat Simple_repeat 3 25 0 4 588 849 316 151 20 chr3R 418294 418374 -27486679 + Gypsy12_I LTR Gypsy 4499 4586 -960 4 588 599 291 138 24 chr3R 418408 418704 -27486349 + Gypsy12_I LTR Gypsy 4723 5052 -494 4 588 546 244 11 44 chr3R 419335 419515 -27485538 + M4DM DNA Transib 216 389 -1046 4 588 432 239 35 42 chr3R 419807 419951 -27485102 + M4DM DNA Transib 791 933 -502 4 588 24 77 0 0 chr3R 420231 420283 -27484770 + AT_rich Low_complexity Low_complexity 1 52 0 4 588 225 159 23 0 chr3R 421195 421239 -27483814 + DNAREP1_DM LINE Penelope 550 594 0 4 588 291 187 253 0 chr3R 421632 421723 -27483330 - PROTOP_B DNA P -1010 143 30 4 588 1088 164 42 35 chr3R 422293 422552 -27482501 - DNAREP1_DM LINE Penelope -333 261 1 4 588 39 0 0 0 chr3R 422897 422936 -27482117 + AT_rich Low_complexity Low_complexity 1 39 0 4 588 434 259 129 6 chr3R 424664 424835 -27480218 + DNAREP1_DM LINE Penelope 302 493 -101 4 588 211 222 19 48 chr3R 425841 425945 -27479108 + T-rich Low_complexity Low_complexity 2 102 0 4 588 25 31 0 0 chr3R 426084 426116 -27478937 + AT_rich Low_complexity Low_complexity 1 32 0 4 588 22 0 0 0 chr3R 426432 426454 -27478599 + AT_rich Low_complexity Low_complexity 1 22 0 4 588 281 203 34 0 chr3R 427787 427846 -27477207 - DNAREP1_DM LINE Penelope -140 454 394 4 588 840 161 155 38 chr3R 428684 428897 -27476156 - DNAREP1_DM LINE Penelope 0 594 357 4 588 225 232 0 18 chr3R 429930 429987 -27475066 - DNAREP1_DM LINE Penelope -538 56 1 4 588 28 48 0 0 chr3R 430290 430332 -27474721 + AT_rich Low_complexity Low_complexity 1 42 0 4 588 679 198 24 41 chr3R 430353 430522 -27474531 + DNAREP1_DM LINE Penelope 328 493 -101 4 588 657 105 69 46 chr3R 431212 431342 -27473711 + DNAREP1_DM LINE Penelope 1 133 -461 4 588 29 84 0 0 chr3R 432023 432094 -27472959 + AT_rich Low_complexity Low_complexity 1 71 0 4 588 582 134 41 82 chr3R 432095 432217 -27472836 + DNAREP1_DM LINE Penelope 343 459 -135 4 588 274 0 0 0 chr3R 433458 433488 -27471565 + Invader3_LTR LTR Gypsy 1 30 -268 4 588 254 102 98 33 chr3R 433498 433559 -27471494 - PROTOP_A DNA P -558 547 483 4 588 1669 98 0 39 chr3R 433574 433829 -27471224 + Invader3_LTR LTR Gypsy 54 298 0 4 588 760 244 113 8 chr3R 433872 434120 -27470933 - DNAREP1_DM LINE Penelope -49 545 272 4 588 9288 21 4 3 chr3R 435326 436430 -27468623 + PROTOP_A DNA P 1 1105 0 4 588 506 233 85 23 chr3R 438001 438177 -27466876 - DNAREP1_DM LINE Penelope -406 188 2 4 588 26 0 0 0 chr3R 441028 441054 -27463999 + AT_rich Low_complexity Low_complexity 1 26 0 4 588 1277 180 221 9 chr3R 441156 441481 -27463572 + DNAREP1_DM LINE Penelope 160 553 -41 4 588 22 56 0 0 chr3R 441769 441805 -27463248 + AT_rich Low_complexity Low_complexity 1 36 0 4 588 1044 139 124 0 chr3R 442437 442638 -27462415 - DNAREP1_DM LINE Penelope -14 580 355 4 588 421 213 0 50 chr3R 442643 442742 -27462311 - DNAREP1_DM LINE Penelope -500 94 1 4 588 31 76 0 0 chr3R 444030 444096 -27460957 + AT_rich Low_complexity Low_complexity 1 66 0 4 588 22 35 0 0 chr3R 444248 444277 -27460776 + AT_rich Low_complexity Low_complexity 1 29 0 4 588 296 232 24 0 chr3R 444621 444703 -27460350 - DNAREP1_DM LINE Penelope -298 296 213 4 588 466 202 139 23 chr3R 446143 446315 -27458738 - DNAREP1_DM LINE Penelope -208 386 195 4 588 557 154 38 19 chr3R 446664 446770 -27458283 + DNAREP1_DM LINE Penelope 1 108 -486 4 588 1031 135 216 52 chr3R 446771 447021 -27458032 + DNAREP1_DM LINE Penelope 304 594 0 4 588 227 243 0 39 chr3R 448332 448409 -27456644 + ROO_I LTR Pao 656 729 -7527 4 588 23 68 0 0 chr3R 449695 449739 -27455314 + AT_rich Low_complexity Low_complexity 1 44 0 4 588 236 234 0 45 chr3R 450256 450323 -27454730 - DNAREP1_DM LINE Penelope -53 541 478 4 588 1156 153 326 20 chr3R 451954 452248 -27452805 - DNAREP1_DM LINE Penelope 0 594 211 4 588 335 238 10 13 chr3R 452293 452397 -27452656 - DNAREP1_DM LINE Penelope -21 573 503 4 588 571 15 0 0 chr3R 455596 455661 -27449392 + DNAREP1_DM LINE Penelope 510 574 -20 4 588 290 27 27 0 chr3R 455658 455695 -27449358 - PROTOP_B DNA P -611 542 505 4 588 263 75 25 0 chr3R 455661 455701 -27449352 + PROTOP_A DNA P 509 549 -556 4 588 253 0 0 0 chr3R 455691 455718 -27449335 + DNAREP1_DM LINE Penelope 568 594 0 4 588 21 36 0 0 chr3R 457088 457116 -27447937 + AT_rich Low_complexity Low_complexity 1 28 0 4 588 811 149 173 52 chr3R 457129 457320 -27447733 - DNAREP1_DM LINE Penelope -29 565 352 4 588 517 79 0 0 chr3R 457336 457399 -27447654 - DNAREP1_DM LINE Penelope -531 63 1 4 588 658 159 282 0 chr3R 459777 459940 -27445113 - DNAREP1_DM LINE Penelope -11 583 375 4 588 34 0 0 0 chr3R 460926 460960 -27444093 + AT_rich Low_complexity Low_complexity 1 34 0 4 588 225 59 88 0 chr3R 461069 461103 -27443950 - PROTOP_B DNA P -608 545 509 4 588 347 224 212 17 chr3R 461327 461445 -27443608 + DNAREP1_DM LINE Penelope 1 141 -453 4 588 203 136 22 22 chr3R 462404 462449 -27442604 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 4 588 272 62 208 0 chr3R 462536 462584 -27442469 - DNAREP1_DM LINE Penelope 0 594 537 4 588 1098 125 73 6 chr3R 462558 462735 -27442318 + DNAREP1_DM LINE Penelope 263 451 -143 4 588 238 211 208 14 chr3R 466509 466581 -27438472 + DNAREP1_DM LINE Penelope 444 529 -65 4 588 192 231 0 0 chr3R 466828 466880 -27438173 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 4 588 33 43 0 0 chr3R 467411 467458 -27437595 + AT_rich Low_complexity Low_complexity 1 47 0 4 588 201 154 0 0 chr3R 468732 468771 -27436282 + (CAG)n Simple_repeat Simple_repeat 1 39 0 4 588 24 53 0 0 chr3R 469110 469148 -27435905 + AT_rich Low_complexity Low_complexity 1 38 0 4 588 24 0 0 0 chr3R 471288 471312 -27433741 + AT_rich Low_complexity Low_complexity 1 24 0 4 588 33 0 0 0 chr3R 476234 476267 -27428786 + AT_rich Low_complexity Low_complexity 1 33 0 4 588 22 56 0 0 chr3R 483256 483292 -27421761 + AT_rich Low_complexity Low_complexity 1 36 0 4 588 630 0 0 0 chr3R 483562 483632 -27421421 + (TTA)n Simple_repeat Simple_repeat 3 72 0 4 588 25 31 0 0 chr3R 483663 483695 -27421358 + AT_rich Low_complexity Low_complexity 1 32 0 4 588 26 0 0 0 chr3R 484627 484653 -27420400 + AT_rich Low_complexity Low_complexity 1 26 0 4 588 924 80 0 0 chr3R 484812 484937 -27420116 + BS LINE Jockey 5001 5125 -1 4 588 24 0 0 0 chr3R 485014 485038 -27420015 + AT_rich Low_complexity Low_complexity 1 24 0 4 588 186 222 0 0 chr3R 485851 485905 -27419148 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 588 22 56 0 0 chr3R 487291 487327 -27417726 + AT_rich Low_complexity Low_complexity 1 36 0 4 588 180 158 0 0 chr3R 492906 492944 -27412109 + (CAG)n Simple_repeat Simple_repeat 1 38 0 4 588 241 26 53 0 chr3R 493845 493883 -27411170 + (GGA)n Simple_repeat Simple_repeat 1 40 0 4 588 38 39 0 0 chr3R 500440 500492 -27404561 + AT_rich Low_complexity Low_complexity 1 52 0 4 588 235 237 0 17 chr3R 503046 503106 -27401947 + (CAA)n Simple_repeat Simple_repeat 2 60 0 4 588 276 30 0 0 chr3R 503793 503826 -27401227 + (TAAAA)n Simple_repeat Simple_repeat 1 33 0 4 588 210 71 0 0 chr3R 505248 505276 -27399777 + (TATATG)n Simple_repeat Simple_repeat 5 32 0 4 588 37 23 0 0 chr3R 506119 506163 -27398890 + AT_rich Low_complexity Low_complexity 1 44 0 4 588 665 155 7 44 chr3R 506198 506333 -27398720 + DNAREP1_DM LINE Penelope 3 132 -462 4 588 14556 26 19 1 chr3R 508953 510657 -27394396 - S_DM DNA Tc1 0 1736 1 4 588 540 191 0 0 chr3R 516383 516477 -27388576 - DNAREP1_DM LINE Penelope -1 593 500 4 588 561 221 146 50 chr3R 516489 516708 -27388345 - DNAREP1_DM LINE Penelope -155 439 200 4 588 403 197 0 0 chr3R 516773 516844 -27388209 - DNAREP1_DM LINE Penelope -523 71 1 4 588 22 0 0 0 chr3R 517124 517146 -27387907 + AT_rich Low_complexity Low_complexity 1 22 0 4 588 351 148 0 0 chr3R 518200 518254 -27386799 + DNAREP1_DM LINE Penelope 1 54 -540 4 588 21 0 0 0 chr3R 518348 518369 -27386684 + AT_rich Low_complexity Low_complexity 1 21 0 4 588 26 0 0 0 chr3R 518424 518450 -27386603 + AT_rich Low_complexity Low_complexity 1 26 0 4 588 21 0 0 0 chr3R 519397 519418 -27385635 + AT_rich Low_complexity Low_complexity 1 21 0 4 588 272 139 0 0 chr3R 521068 521111 -27383942 + DNAREP1_DM LINE Penelope 552 594 0 4 588 27 62 0 0 chr3R 521233 521281 -27383772 + AT_rich Low_complexity Low_complexity 1 48 0 4 588 200 294 0 0 chr3R 523900 523968 -27381085 + GA-rich Low_complexity Low_complexity 3 70 0 4 589 33 43 0 0 chr3R 532557 532604 -27372449 + AT_rich Low_complexity Low_complexity 1 47 0 4 589 221 254 0 40 chr3R 535933 536007 -27369046 + (CAG)n Simple_repeat Simple_repeat 3 73 0 4 589 22 0 0 0 chr3R 538077 538099 -27366954 + AT_rich Low_complexity Low_complexity 1 22 0 4 589 394 43 0 0 chr3R 538099 538145 -27366908 - BS2 LINE Jockey -2 4719 4674 4 589 652 150 71 57 chr3R 538188 538329 -27366724 - DNAREP1_DM LINE Penelope -110 484 342 4 589 9676 107 7 1 chr3R 540356 541738 -27363315 + S_DM DNA Tc1 346 1736 0 4 589 371 263 60 0 chr3R 541739 541894 -27363159 + Gypsy_I LTR Gypsy 1797 1968 -4453 4 589 495 326 78 39 chr3R 541895 542217 -27362836 + GTWIN_I LTR Gypsy 2112 2599 -4923 4 589 513 299 101 5 chr3R 542246 542434 -27362619 + GTWIN_I LTR Gypsy 2486 2691 -3730 4 589 766 268 72 15 chr3R 542435 542700 -27362353 + Gypsy_I LTR Gypsy 2901 3180 -3327 4 589 1206 279 79 27 chr3R 542728 543173 -27361880 + Gypsy_I LTR Gypsy 3378 3845 -2662 4 589 243 215 13 0 chr3R 543263 543342 -27361711 + Gypsy6_I LTR Gypsy 4353 4478 -3044 4 589 451 281 75 0 chr3R 543346 543492 -27361561 + GTWIN_I LTR Gypsy 4103 4259 -2162 4 589 1852 135 103 30 chr3R 543502 543869 -27361184 + Gypsy12A_LTR LTR Gypsy 2 395 -1885 4 589 1032 169 97 30 chr3R 543917 544215 -27360838 + Gypsy12A_LTR LTR Gypsy 728 1045 -1235 4 589 3142 114 14 18 chr3R 544253 544743 -27360310 + Gypsy12A_LTR LTR Gypsy 1793 2280 0 4 589 345 204 11 21 chr3R 544793 544888 -27360165 + Gypsy_DS LTR Gypsy 6824 6917 -605 4 589 23 92 0 0 chr3R 545219 545284 -27359769 + AT_rich Low_complexity Low_complexity 1 65 0 4 589 21 0 0 0 chr3R 547575 547596 -27357457 + AT_rich Low_complexity Low_complexity 1 21 0 4 589 510 240 38 15 chr3R 547703 547914 -27357139 + DNAREP1_DM LINE Penelope 86 315 -279 4 589 24 32 0 0 chr3R 558736 558767 -27346286 + AT_rich Low_complexity Low_complexity 1 31 0 4 589 33 56 0 0 chr3R 558840 558894 -27346159 + AT_rich Low_complexity Low_complexity 1 54 0 4 589 213 154 0 0 chr3R 559092 559131 -27345922 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 589 2919 89 165 16 chr3R 561822 562339 -27342714 - DNAREP1_DM LINE Penelope 0 594 1 4 589 31 58 0 0 chr3R 562519 562571 -27342482 + AT_rich Low_complexity Low_complexity 1 52 0 4 589 21 82 0 0 chr3R 563640 563689 -27341364 + AT_rich Low_complexity Low_complexity 1 49 0 4 589 243 164 137 0 chr3R 565711 565784 -27339269 + DNAREP1_DM LINE Penelope 221 303 -291 4 589 226 162 45 227 chr3R 566900 566988 -27338065 - DNAREP1_DM LINE Penelope -180 414 343 4 589 35 41 0 0 chr3R 569941 569990 -27335063 + AT_rich Low_complexity Low_complexity 1 49 0 4 589 198 0 0 0 chr3R 571992 572014 -27333039 + (T)n Simple_repeat Simple_repeat 1 22 0 4 589 821 208 176 92 chr3R 575708 576078 -27328975 - DNAREP1_DM LINE Penelope -102 492 92 4 589 10175 3 0 0 chr3R 579025 580128 -27324925 + FW_DM LINE Jockey 1 1103 -3589 4 589 28664 2 0 1 chr3R 580129 583255 -27321798 + FW_DM LINE Jockey 1570 4692 0 4 589 224 220 0 0 chr3R 583889 583939 -27321114 + (TTG)n Simple_repeat Simple_repeat 1 50 0 4 589 12532 16 2 0 chr3R 585499 586929 -27318124 + M4DM DNA Transib 2 1434 -1 4 589 198 174 0 0 chr3R 587242 587288 -27317765 + T-rich Low_complexity Low_complexity 1 46 0 4 589 34 24 0 0 chr3R 588124 588165 -27316888 + AT_rich Low_complexity Low_complexity 1 41 0 4 589 237 185 0 0 chr3R 593707 593772 -27311281 + (CAT)n Simple_repeat Simple_repeat 3 67 0 4 589 38 0 0 0 chr3R 594301 594339 -27310714 + AT_rich Low_complexity Low_complexity 1 38 0 4 589 192 40 0 0 chr3R 597178 597203 -27307850 + (CATTT)n Simple_repeat Simple_repeat 3 27 0 4 589 25 31 0 0 chr3R 606524 606556 -27298497 + AT_rich Low_complexity Low_complexity 1 32 0 4 589 22 0 0 0 chr3R 606965 606987 -27298066 + AT_rich Low_complexity Low_complexity 1 22 0 4 589 435 198 77 9 chr3R 607790 607910 -27297143 + DNAREP1_DM LINE Penelope 399 489 -105 4 589 21 0 0 0 chr3R 611110 611131 -27293922 + AT_rich Low_complexity Low_complexity 1 21 0 4 589 686 74 123 62 chr3R 611223 611353 -27293700 - G5_DM LINE Jockey -52 4804 4667 4 589 325 230 0 0 chr3R 611799 611873 -27293180 + DNAREP1_DM LINE Penelope 411 484 -110 4 589 221 193 18 0 chr3R 612227 612284 -27292769 + (TA)n Simple_repeat Simple_repeat 1 58 0 4 589 495 0 0 0 chr3R 612457 612512 -27292541 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 589 29 47 0 0 chr3R 613272 613315 -27291738 + AT_rich Low_complexity Low_complexity 1 43 0 4 589 180 111 0 0 chr3R 619014 619041 -27286012 + (TTA)n Simple_repeat Simple_repeat 2 28 0 4 589 221 152 0 61 chr3R 620579 620628 -27284425 + (CTG)n Simple_repeat Simple_repeat 2 47 0 4 589 317 175 36 48 chr3R 620999 621083 -27283970 + DNAREP1_DM LINE Penelope 431 513 -81 4 589 27 0 0 0 chr3R 621164 621191 -27283862 + AT_rich Low_complexity Low_complexity 1 27 0 4 589 354 194 0 80 chr3R 622324 622436 -27282617 - ROO_I LTR Pao -7513 743 641 4 589 248 91 23 0 chr3R 622551 622595 -27282458 + (CTG)n Simple_repeat Simple_repeat 3 47 0 4 589 232 270 0 0 chr3R 622851 622925 -27282128 + (CTG)n Simple_repeat Simple_repeat 1 74 0 4 589 216 97 0 0 chr3R 622965 622996 -27282057 + (CTG)n Simple_repeat Simple_repeat 1 31 0 4 589 269 266 0 0 chr3R 623050 623129 -27281924 + (TTG)n Simple_repeat Simple_repeat 1 79 0 4 589 330 87 0 0 chr3R 623476 623522 -27281531 + (GA)n Simple_repeat Simple_repeat 2 47 0 4 589 243 175 0 0 chr3R 625593 625650 -27279403 + CT-rich Low_complexity Low_complexity 3 59 0 4 589 900 59 0 0 chr3R 627851 627970 -27277083 + (CA)n Simple_repeat Simple_repeat 1 119 0 4 589 330 80 0 0 chr3R 629676 629726 -27275327 + (A)n Simple_repeat Simple_repeat 1 50 0 4 589 39 22 0 0 chr3R 631223 631269 -27273784 + AT_rich Low_complexity Low_complexity 1 46 0 4 589 231 182 18 35 chr3R 632868 632925 -27272128 + (TATG)n Simple_repeat Simple_repeat 2 57 0 4 589 21 0 0 0 chr3R 633005 633026 -27272027 + AT_rich Low_complexity Low_complexity 1 21 0 4 589 21 82 0 0 chr3R 637949 637998 -27267055 + AT_rich Low_complexity Low_complexity 1 49 0 4 589 25 0 0 0 chr3R 638955 638980 -27266073 + AT_rich Low_complexity Low_complexity 1 25 0 4 589 216 0 0 0 chr3R 640814 640838 -27264215 + (CTTA)n Simple_repeat Simple_repeat 1 24 0 4 589 22 35 0 0 chr3R 648745 648774 -27256279 + AT_rich Low_complexity Low_complexity 1 29 0 4 589 194 62 31 0 chr3R 649932 649964 -27255089 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 589 342 130 0 0 chr3R 651668 651722 -27253331 - DNAREP1_DM LINE Penelope -104 490 437 4 589 576 159 35 17 chr3R 654486 654601 -27250452 + DMRP1 Unknown Unknown 14 130 -216 4 590 1058 114 114 41 chr3R 657163 657383 -27247670 - DNAREP1_DM LINE Penelope -357 237 2 4 590 8359 43 11 3 chr3R 657599 658606 -27246447 - TC1_DM DNA Tc1 0 1666 652 4 590 798 38 9 0 chr3R 658627 658733 -27246320 - TC1_DM DNA Tc1 -1559 107 1 4 590 348 208 0 0 chr3R 664028 664100 -27240953 - DNAREP1_DM LINE Penelope -160 434 363 4 590 208 283 0 0 chr3R 664606 664659 -27240394 + (TTGGGG)n Simple_repeat Simple_repeat 6 58 0 4 590 293 270 0 0 chr3R 665014 665103 -27239950 - DNAREP1_DM LINE Penelope -1 593 505 4 590 200 206 0 0 chr3R 667073 667107 -27237946 + (CAGA)n Simple_repeat Simple_repeat 1 34 0 4 590 35 0 0 0 chr3R 668219 668254 -27236799 + AT_rich Low_complexity Low_complexity 1 35 0 4 590 460 246 69 0 chr3R 669929 670059 -27234994 + DNAREP1_DM LINE Penelope 390 528 -66 4 590 938 143 107 6 chr3R 670028 670197 -27234856 - DNAREP1_DM LINE Penelope -48 546 361 4 590 24 32 0 0 chr3R 670208 670239 -27234814 + AT_rich Low_complexity Low_complexity 1 31 0 4 590 288 228 0 0 chr3R 670245 670302 -27234751 - DNAREP1_DM LINE Penelope -537 57 1 4 590 258 309 0 0 chr3R 673522 673603 -27231450 + (CCCCAG)n Simple_repeat Simple_repeat 2 82 0 4 590 332 183 0 63 chr3R 678899 679010 -27226043 + ROO_I LTR Pao 639 742 -7514 4 590 213 132 0 0 chr3R 682825 682863 -27222190 + (CACTC)n Simple_repeat Simple_repeat 4 41 0 4 590 198 103 0 0 chr3R 687072 687101 -27217952 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4 590 22 35 0 0 chr3R 689069 689098 -27215955 + AT_rich Low_complexity Low_complexity 1 29 0 4 590 214 293 0 0 chr3R 689551 689626 -27215427 + (CAAA)n Simple_repeat Simple_repeat 1 75 0 4 590 180 111 0 0 chr3R 690969 690996 -27214057 + (CATA)n Simple_repeat Simple_repeat 2 28 0 4 590 417 20 0 0 chr3R 693614 693664 -27211389 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 590 411 130 0 0 chr3R 694461 694538 -27210515 + (CAG)n Simple_repeat Simple_repeat 3 79 0 4 590 180 77 0 0 chr3R 694639 694665 -27210388 + (CCA)n Simple_repeat Simple_repeat 1 26 0 4 590 216 119 0 45 chr3R 700189 700233 -27204820 + (CAGC)n Simple_repeat Simple_repeat 2 43 0 4 590 180 77 0 0 chr3R 705941 705967 -27199086 + (CGAT)n Simple_repeat Simple_repeat 1 26 0 4 590 205 167 0 0 chr3R 707475 707511 -27197542 + (GATTG)n Simple_repeat Simple_repeat 3 38 0 4 590 23 0 0 0 chr3R 708016 708039 -27197014 + AT_rich Low_complexity Low_complexity 1 23 0 4 590 3363 0 0 0 chr3R 713255 713622 -27191431 + ROVER-LTR_DM LTR Gypsy 1 367 0 4 590 58750 0 0 0 chr3R 713622 720208 -27184845 + ROVER-I_DM LTR Gypsy 1 6584 0 4 590 3363 0 0 0 chr3R 720208 720575 -27184478 + ROVER-LTR_DM LTR Gypsy 1 367 0 4 590 21 100 0 0 chr3R 720935 721005 -27184048 + AT_rich Low_complexity Low_complexity 1 70 0 4 590 216 135 0 0 chr3R 727162 727199 -27177854 + (ACTG)n Simple_repeat Simple_repeat 1 37 0 4 590 228 35 0 0 chr3R 729641 729670 -27175383 + (ATTTG)n Simple_repeat Simple_repeat 3 31 0 4 590 21 0 0 0 chr3R 730264 730285 -27174768 + AT_rich Low_complexity Low_complexity 1 21 0 4 590 1020 65 231 17 chr3R 730286 730459 -27174594 + DNAREP1_DM LINE Penelope 340 549 -45 4 590 991 124 153 47 chr3R 731019 731273 -27173780 + DNAREP1_DM LINE Penelope 1 281 -313 4 590 271 163 0 0 chr3R 731294 731337 -27173716 + DNAREP1_DM LINE Penelope 552 594 0 4 590 251 172 16 79 chr3R 731337 731357 -27173696 - P_DG DNA P -90 2798 2740 4 590 27 49 0 0 chr3R 731565 731606 -27173447 + AT_rich Low_complexity Low_complexity 1 41 0 4 590 22 0 0 0 chr3R 732404 732426 -27172627 + AT_rich Low_complexity Low_complexity 1 22 0 4 590 42 57 0 0 chr3R 736097 736167 -27168886 + AT_rich Low_complexity Low_complexity 1 70 0 4 590 211 196 35 18 chr3R 736757 736814 -27168239 + (CGAG)n Simple_repeat Simple_repeat 1 58 0 4 590 26 50 0 0 chr3R 752175 752215 -27152838 + AT_rich Low_complexity Low_complexity 1 40 0 4 590 233 72 0 67 chr3R 752734 752779 -27152274 + (GGA)n Simple_repeat Simple_repeat 1 42 0 4 590 343 244 128 16 chr3R 765386 765511 -27139542 - DNAREP1_DM LINE Penelope -23 571 433 4 590 22 111 0 0 chr3R 765997 766096 -27138957 + AT_rich Low_complexity Low_complexity 1 99 0 4 590 183 139 0 0 chr3R 768117 768153 -27136900 + (CAG)n Simple_repeat Simple_repeat 3 38 0 4 590 319 198 118 21 chr3R 768587 768680 -27136373 - DNAREP1_DM LINE Penelope -50 544 443 4 590 58 15 0 0 chr3R 768951 769016 -27136037 + AT_rich Low_complexity Low_complexity 1 65 0 4 590 22 103 0 0 chr3R 770219 770297 -27134756 + AT_rich Low_complexity Low_complexity 1 78 0 4 590 272 236 11 0 chr3R 770539 770628 -27134425 - DNAREP1_DM LINE Penelope -279 315 226 4 590 21 0 0 0 chr3R 771227 771248 -27133805 + AT_rich Low_complexity Low_complexity 1 21 0 4 590 568 204 301 0 chr3R 771348 771544 -27133509 - MARINA DNA Mariner -276 991 737 4 590 1602 92 92 8 chr3R 773243 773483 -27131570 + DNAREP1_DM LINE Penelope 202 461 -133 4 590 21 36 0 0 chr3R 775507 775535 -27129518 + AT_rich Low_complexity Low_complexity 1 28 0 4 590 243 191 0 0 chr3R 777333 777380 -27127673 - DNAREP1_DM LINE Penelope -511 83 37 4 590 234 121 0 0 chr3R 779135 779168 -27125885 - DNAREP1_DM LINE Penelope -538 56 24 4 590 225 65 0 0 chr3R 781164 781195 -27123858 + (GA)n Simple_repeat Simple_repeat 1 31 0 4 590 226 222 0 0 chr3R 784983 785028 -27120025 + (ACTG)n Simple_repeat Simple_repeat 1 45 0 4 590 21 0 0 0 chr3R 785199 785220 -27119833 + AT_rich Low_complexity Low_complexity 1 21 0 4 591 297 51 0 0 chr3R 787753 787792 -27117261 + (TCCA)n Simple_repeat Simple_repeat 4 42 0 4 591 24 0 0 0 chr3R 788324 788348 -27116705 + AT_rich Low_complexity Low_complexity 1 24 0 4 591 240 122 0 0 chr3R 790983 791024 -27114029 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 591 34 0 0 0 chr3R 794736 794770 -27110283 + AT_rich Low_complexity Low_complexity 1 34 0 4 591 24 32 0 0 chr3R 794788 794819 -27110234 + AT_rich Low_complexity Low_complexity 1 31 0 4 591 39 0 0 0 chr3R 796040 796079 -27108974 + AT_rich Low_complexity Low_complexity 1 39 0 4 591 23 0 0 0 chr3R 796112 796135 -27108918 + AT_rich Low_complexity Low_complexity 1 23 0 4 591 32 101 0 0 chr3R 798267 798376 -27106677 + AT_rich Low_complexity Low_complexity 1 109 0 4 591 228 241 126 92 chr3R 798686 798805 -27106248 - LINEJ1_DM LINE Jockey -4202 818 696 4 591 939 201 87 102 chr3R 800511 800863 -27104190 + DNAREP1_DM LINE Penelope 1 430 -164 4 591 180 77 0 0 chr3R 800863 800889 -27104164 + (CGGA)n Simple_repeat Simple_repeat 4 29 0 4 591 939 205 102 104 chr3R 800889 801023 -27104030 + DNAREP1_DM LINE Penelope 431 594 0 4 591 625 234 115 65 chr3R 804646 804907 -27100146 - DNAREP1_DM LINE Penelope 0 594 321 4 591 23 0 0 0 chr3R 806595 806618 -27098435 + AT_rich Low_complexity Low_complexity 1 23 0 4 591 214 147 0 0 chr3R 810588 810622 -27094431 + (GCCTG)n Simple_repeat Simple_repeat 3 36 0 4 591 221 347 8 8 chr3R 811150 811269 -27093784 + (TCTG)n Simple_repeat Simple_repeat 1 119 0 4 591 293 282 0 12 chr3R 811176 811262 -27093791 + (TCCG)n Simple_repeat Simple_repeat 4 88 0 4 591 23 68 0 0 chr3R 811321 811365 -27093688 + AT_rich Low_complexity Low_complexity 1 44 0 4 591 200 312 0 0 chr3R 811612 811660 -27093393 + (CCCGAA)n Simple_repeat Simple_repeat 1 48 0 4 591 25 0 0 0 chr3R 811918 811943 -27093110 + AT_rich Low_complexity Low_complexity 1 25 0 4 591 186 71 0 0 chr3R 822142 822170 -27082883 + (A)n Simple_repeat Simple_repeat 1 28 0 4 591 21 0 0 0 chr3R 823976 823997 -27081056 + AT_rich Low_complexity Low_complexity 1 21 0 4 591 258 236 0 53 chr3R 824697 824773 -27080280 + (CGGA)n Simple_repeat Simple_repeat 3 74 0 4 591 21 36 0 0 chr3R 827047 827075 -27077978 + AT_rich Low_complexity Low_complexity 1 28 0 4 591 26 0 0 0 chr3R 828083 828109 -27076944 + AT_rich Low_complexity Low_complexity 1 26 0 4 591 4571 10 0 0 chr3R 828109 828616 -27076437 - DM176_LTR LTR Gypsy 0 507 1 4 591 6552 0 0 0 chr3R 828616 829374 -27075679 - DM176_I LTR Gypsy 0 6420 5663 4 591 40943 3 1 10 chr3R 829368 834349 -27070704 - DM176_I LTR Gypsy -1484 4936 1 4 591 4551 10 0 0 chr3R 834349 834856 -27070197 - DM176_LTR LTR Gypsy 0 507 1 4 591 250 96 68 0 chr3R 834857 834930 -27070123 + (TA)n Simple_repeat Simple_repeat 1 78 0 4 591 258 186 14 28 chr3R 837693 837765 -27067288 + ROO_I LTR Pao 668 738 -7518 4 591 30 27 0 0 chr3R 839244 839281 -27065772 + AT_rich Low_complexity Low_complexity 1 37 0 4 591 24 0 0 0 chr3R 841098 841122 -27063931 + AT_rich Low_complexity Low_complexity 1 24 0 4 591 221 167 0 18 chr3R 843177 843232 -27061821 + (TTG)n Simple_repeat Simple_repeat 1 54 0 4 591 234 91 0 0 chr3R 844775 844808 -27060245 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 4 591 182 160 0 20 chr3R 844972 845023 -27060030 + T-rich Low_complexity Low_complexity 4 53 0 4 591 335 23 0 22 chr3R 845318 845363 -27059690 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 591 207 100 0 0 chr3R 847308 847338 -27057715 + (CAA)n Simple_repeat Simple_repeat 1 30 0 4 591 229 179 54 0 chr3R 847544 847600 -27057453 + G-rich Low_complexity Low_complexity 6 64 0 4 591 23 33 0 0 chr3R 848030 848060 -27056993 + AT_rich Low_complexity Low_complexity 1 30 0 4 591 195 42 0 0 chr3R 850846 850870 -27054183 + (CAAAAA)n Simple_repeat Simple_repeat 6 29 0 4 591 206 245 0 0 chr3R 853484 853533 -27051520 + (TGAA)n Simple_repeat Simple_repeat 3 51 0 4 591 183 42 0 0 chr3R 857136 857160 -27047893 + (CCTAT)n Simple_repeat Simple_repeat 3 26 0 4 591 180 0 0 0 chr3R 857298 857318 -27047735 + (AAGTG)n Simple_repeat Simple_repeat 2 21 0 4 591 261 226 16 0 chr3R 861568 861630 -27043423 + (TTCGGG)n Simple_repeat Simple_repeat 4 66 0 4 591 240 35 0 0 chr3R 864919 864948 -27040105 + (CGGA)n Simple_repeat Simple_repeat 3 31 0 4 591 2474 8 0 0 chr3R 871621 871887 -27033166 + DMLTR5 LTR Gypsy 1 266 0 4 591 7084 1 0 2 chr3R 871886 872682 -27032371 + HMSBEAGLE_I LTR Gypsy 1 796 -5733 4 591 953 35 52 12 chr3R 872682 872854 -27032199 + (TTA)n Simple_repeat Simple_repeat 1 179 0 4 591 51505 0 3 0 chr3R 872854 878400 -27026653 + HMSBEAGLE_I LTR Gypsy 969 6529 0 4 591 2474 8 0 0 chr3R 878400 878666 -27026387 + DMLTR5 LTR Gypsy 1 266 0 4 591 21 36 0 0 chr3R 878822 878850 -27026203 + AT_rich Low_complexity Low_complexity 1 28 0 4 591 211 158 26 0 chr3R 880887 880925 -27024128 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 591 23 0 0 0 chr3R 881006 881029 -27024024 + AT_rich Low_complexity Low_complexity 1 23 0 4 591 249 210 0 0 chr3R 883031 883093 -27021960 + (CGGA)n Simple_repeat Simple_repeat 3 64 0 4 591 36 0 0 0 chr3R 889652 889688 -27015365 + AT_rich Low_complexity Low_complexity 1 36 0 4 591 2448 4 0 0 chr3R 893757 894024 -27011029 - MDG3_LTR LTR Gypsy 0 267 1 4 591 44830 1 12 0 chr3R 894024 898951 -27006102 - MDG3_I LTR Gypsy 0 4986 1 4 591 2448 4 0 0 chr3R 898950 899217 -27005836 - MDG3_LTR LTR Gypsy 0 267 1 4 591 264 77 0 0 chr3R 901727 901766 -27003287 + (TAA)n Simple_repeat Simple_repeat 3 41 0 4 591 36 0 0 0 chr3R 905737 905773 -26999280 + AT_rich Low_complexity Low_complexity 1 36 0 4 591 249 57 0 0 chr3R 906309 906344 -26998709 + (GAGTG)n Simple_repeat Simple_repeat 2 36 0 4 591 216 0 0 0 chr3R 907270 907294 -26997759 + (A)n Simple_repeat Simple_repeat 1 24 0 4 591 276 188 0 0 chr3R 909570 909634 -26995419 + (TTG)n Simple_repeat Simple_repeat 2 65 0 4 591 33 25 0 0 chr3R 909682 909722 -26995331 + AT_rich Low_complexity Low_complexity 1 40 0 4 591 247 245 0 0 chr3R 910040 910093 -26994960 + (CTG)n Simple_repeat Simple_repeat 3 55 0 4 591 201 121 0 0 chr3R 910515 910548 -26994505 + (CTG)n Simple_repeat Simple_repeat 3 35 0 4 591 288 53 0 0 chr3R 910857 910895 -26994158 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 591 230 206 0 0 chr3R 910953 911021 -26994032 - ROO_I LTR Pao -7542 714 647 4 591 292 128 22 44 chr3R 911343 911433 -26993620 - ROO_I LTR Pao -7531 725 638 4 591 213 132 0 0 chr3R 911529 911567 -26993486 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 591 276 147 13 13 chr3R 911595 911671 -26993382 - ROO_I LTR Pao -7530 726 651 4 591 244 260 14 0 chr3R 917039 917112 -26987941 + (CAG)n Simple_repeat Simple_repeat 1 74 0 4 592 25 31 0 0 chr3R 919770 919802 -26985251 + AT_rich Low_complexity Low_complexity 1 32 0 4 592 218 148 0 18 chr3R 921089 921144 -26983909 + (CGAAT)n Simple_repeat Simple_repeat 2 55 0 4 592 29 0 0 0 chr3R 922706 922735 -26982318 + AT_rich Low_complexity Low_complexity 1 29 0 4 592 189 224 0 0 chr3R 927551 927609 -26977444 + (ACTG)n Simple_repeat Simple_repeat 1 58 0 4 592 30 45 0 0 chr3R 930975 931019 -26974034 + AT_rich Low_complexity Low_complexity 1 44 0 4 592 494 253 91 29 chr3R 931772 931947 -26973106 - DNAREP1_DM LINE Penelope -46 548 363 4 592 352 157 0 0 chr3R 931960 932011 -26973042 - DNAREP1_DM LINE Penelope -532 62 12 4 592 184 54 53 26 chr3R 933350 933388 -26971665 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 592 222 164 0 0 chr3R 935582 935637 -26969416 + (GGTTG)n Simple_repeat Simple_repeat 4 58 0 4 592 36 0 0 0 chr3R 936154 936190 -26968863 + AT_rich Low_complexity Low_complexity 1 36 0 4 592 198 136 0 0 chr3R 938595 938639 -26966414 + (CCCA)n Simple_repeat Simple_repeat 1 44 0 4 592 23 33 0 0 chr3R 940947 940977 -26964076 + AT_rich Low_complexity Low_complexity 1 30 0 4 592 29 0 0 0 chr3R 950445 950474 -26954579 + AT_rich Low_complexity Low_complexity 1 29 0 4 592 22 35 0 0 chr3R 951313 951342 -26953711 + AT_rich Low_complexity Low_complexity 1 29 0 4 592 379 181 117 0 chr3R 952444 952538 -26952515 + DNAREP1_DM LINE Penelope 488 592 -2 4 592 70 48 0 0 chr3R 952578 952683 -26952370 + AT_rich Low_complexity Low_complexity 1 105 0 4 592 238 222 74 0 chr3R 957452 957506 -26947547 + DNAREP1_DM LINE Penelope 1 58 -536 4 592 288 77 0 0 chr3R 959155 959194 -26945859 + (CACTT)n Simple_repeat Simple_repeat 1 39 0 4 592 205 250 0 0 chr3R 959294 959346 -26945707 + (GTGTG)n Simple_repeat Simple_repeat 3 54 0 4 592 207 114 0 0 chr3R 959906 959941 -26945112 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 592 220 204 0 0 chr3R 961597 961646 -26943407 + (CAGAA)n Simple_repeat Simple_repeat 2 50 0 4 592 296 224 73 27 chr3R 962518 962628 -26942425 + DNAREP1_DM LINE Penelope 426 540 -54 4 592 21 0 0 0 chr3R 964721 964742 -26940311 + AT_rich Low_complexity Low_complexity 1 21 0 4 592 710 11 0 0 chr3R 964745 964834 -26940219 + G4_DM LINE Jockey 3768 3856 0 4 592 22 0 0 0 chr3R 964837 964859 -26940194 + AT_rich Low_complexity Low_complexity 1 22 0 4 592 231 157 0 0 chr3R 966154 966205 -26938848 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 592 212 175 0 0 chr3R 968277 968317 -26936736 + (CAAA)n Simple_repeat Simple_repeat 3 42 0 4 592 27 29 0 0 chr3R 969857 969891 -26935162 + AT_rich Low_complexity Low_complexity 1 34 0 4 592 24 0 0 0 chr3R 970249 970273 -26934780 + AT_rich Low_complexity Low_complexity 1 24 0 4 592 270 192 0 0 chr3R 974920 974972 -26930081 + DNAREP1_DM LINE Penelope 543 594 0 4 592 1620 18 0 16 chr3R 975240 975817 -26929236 + (TTTA)n Simple_repeat Simple_repeat 1 567 0 4 592 346 96 101 6 chr3R 975814 975972 -26929081 + (TTA)n Simple_repeat Simple_repeat 2 174 0 4 592 892 86 13 35 chr3R 975972 976199 -26928854 + (TTTA)n Simple_repeat Simple_repeat 1 222 0 4 592 22 0 0 0 chr3R 979975 979997 -26925056 + AT_rich Low_complexity Low_complexity 1 22 0 4 592 210 91 0 0 chr3R 981502 981535 -26923518 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 592 30 0 0 0 chr3R 984854 984884 -26920169 + AT_rich Low_complexity Low_complexity 1 30 0 4 592 21 36 0 0 chr3R 987612 987640 -26917413 + AT_rich Low_complexity Low_complexity 1 28 0 4 592 237 146 0 0 chr3R 988427 988475 -26916578 + (GGTTG)n Simple_repeat Simple_repeat 3 50 0 4 592 13769 34 20 0 chr3R 993299 994932 -26910121 + TC1_DM DNA Tc1 1 1666 0 4 592 273 217 542 0 chr3R 994971 995078 -26909975 + DNAREP1_DM LINE Penelope 429 593 -1 4 592 203 0 37 0 chr3R 998001 998028 -26907025 + (TAGA)n Simple_repeat Simple_repeat 2 29 0 4 592 32 43 0 0 chr3R 998063 998109 -26906944 + AT_rich Low_complexity Low_complexity 1 46 0 4 592 27 35 0 50 chr3R 998369 998429 -26906624 + AT_rich Low_complexity Low_complexity 1 57 0 4 592 288 167 0 0 chr3R 1001348 1001408 -26903645 - ROO_I LTR Pao -7532 724 665 4 592 273 141 14 72 chr3R 1001540 1001609 -26903444 - TART_B1 LINE telomeric -10458 196 132 4 592 198 150 0 0 chr3R 1001692 1001732 -26903321 + (CTG)n Simple_repeat Simple_repeat 1 40 0 4 592 261 119 0 0 chr3R 1001781 1001823 -26903230 + (CTG)n Simple_repeat Simple_repeat 3 44 0 4 592 240 200 0 0 chr3R 1001892 1001952 -26903101 + (CTG)n Simple_repeat Simple_repeat 3 62 0 4 592 40 0 0 0 chr3R 1002905 1002945 -26902108 + AT_rich Low_complexity Low_complexity 1 40 0 4 592 21 0 0 0 chr3R 1008018 1008039 -26897014 + AT_rich Low_complexity Low_complexity 1 21 0 4 592 251 140 0 20 chr3R 1014093 1014144 -26890909 + (ACTG)n Simple_repeat Simple_repeat 4 53 0 4 592 495 0 0 0 chr3R 1014427 1014482 -26890571 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 592 211 200 25 0 chr3R 1015906 1015946 -26889107 + (CCCA)n Simple_repeat Simple_repeat 2 42 0 4 592 210 128 0 0 chr3R 1018304 1018343 -26886710 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 592 188 111 28 0 chr3R 1019917 1019953 -26885100 + (TAAAA)n Simple_repeat Simple_repeat 3 39 0 4 592 23 33 0 0 chr3R 1021847 1021877 -26883176 + AT_rich Low_complexity Low_complexity 1 30 0 4 592 27 29 0 0 chr3R 1028318 1028352 -26876701 + AT_rich Low_complexity Low_complexity 1 34 0 4 592 370 198 164 43 chr3R 1031972 1032088 -26872965 - DNAREP1_DM LINE Penelope -19 575 446 4 592 306 244 37 82 chr3R 1032103 1032237 -26872816 - DNAREP1_DM LINE Penelope -461 133 6 4 592 224 222 0 0 chr3R 1037293 1037338 -26867715 + (CAGA)n Simple_repeat Simple_repeat 1 45 0 4 592 29 28 0 0 chr3R 1043354 1043390 -26861663 + AT_rich Low_complexity Low_complexity 1 36 0 4 592 220 224 0 0 chr3R 1043474 1043523 -26861530 + (TTTAA)n Simple_repeat Simple_repeat 5 53 0 4 593 28 29 0 0 chr3R 1051537 1051572 -26853481 + AT_rich Low_complexity Low_complexity 1 35 0 4 593 308 151 0 36 chr3R 1051594 1051649 -26853404 + DNAREP1_DM LINE Penelope 391 443 -151 4 593 471 194 0 21 chr3R 1051664 1051759 -26853294 + DNAREP1_DM LINE Penelope 500 592 -2 4 593 26 50 0 0 chr3R 1055065 1055105 -26849948 + AT_rich Low_complexity Low_complexity 1 40 0 4 593 183 42 0 0 chr3R 1057405 1057429 -26847624 + (A)n Simple_repeat Simple_repeat 1 24 0 4 593 243 270 0 0 chr3R 1064987 1065050 -26840003 + DNAREP1_DM LINE Penelope 117 179 -415 4 593 248 170 0 0 chr3R 1065062 1065109 -26839944 + DNAREP1_DM LINE Penelope 364 410 -184 4 593 228 111 0 0 chr3R 1067670 1067706 -26837347 + (CATCC)n Simple_repeat Simple_repeat 4 39 0 4 593 210 37 0 0 chr3R 1068983 1069010 -26836043 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 593 21 0 0 0 chr3R 1075599 1075620 -26829433 + AT_rich Low_complexity Low_complexity 1 21 0 4 593 1176 184 171 55 chr3R 1077955 1078370 -26826683 + DNAREP1_DM LINE Penelope 26 488 -106 4 593 22 70 0 0 chr3R 1081661 1081704 -26823349 + AT_rich Low_complexity Low_complexity 1 43 0 4 593 22 0 0 0 chr3R 1082433 1082455 -26822598 + AT_rich Low_complexity Low_complexity 1 22 0 4 593 185 154 0 25 chr3R 1083510 1083550 -26821503 + (CAG)n Simple_repeat Simple_repeat 1 39 0 4 593 12154 101 3 1 chr3R 1085095 1086824 -26818229 - S_DM DNA Tc1 0 1736 5 4 593 47 0 0 0 chr3R 1089454 1089501 -26815552 + AT_rich Low_complexity Low_complexity 1 47 0 4 593 23 0 0 0 chr3R 1094625 1094648 -26810405 + AT_rich Low_complexity Low_complexity 1 23 0 4 593 28 0 0 0 chr3R 1094737 1094765 -26810288 + AT_rich Low_complexity Low_complexity 1 28 0 4 593 948 142 164 40 chr3R 1095386 1095635 -26809418 + DMRP1 Unknown Unknown 2 281 -65 4 593 210 229 0 32 chr3R 1096200 1096263 -26808790 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 593 230 250 0 0 chr3R 1098277 1098329 -26806724 + (TATATG)n Simple_repeat Simple_repeat 5 56 0 4 593 207 139 0 0 chr3R 1098461 1098497 -26806556 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 593 23 54 0 0 chr3R 1099328 1099365 -26805688 + AT_rich Low_complexity Low_complexity 1 37 0 4 593 180 77 0 0 chr3R 1101353 1101379 -26803674 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 593 22 0 0 0 chr3R 1107313 1107335 -26797718 + AT_rich Low_complexity Low_complexity 1 22 0 4 593 441 36 0 0 chr3R 1108737 1108792 -26796261 + (TC)n Simple_repeat Simple_repeat 1 55 0 4 593 249 33 0 0 chr3R 1113093 1113123 -26791930 + (CAG)n Simple_repeat Simple_repeat 3 32 0 4 593 21 0 0 0 chr3R 1117598 1117619 -26787434 + AT_rich Low_complexity Low_complexity 1 21 0 4 593 200 86 29 0 chr3R 1117980 1118015 -26787038 + (GAA)n Simple_repeat Simple_repeat 1 36 0 4 593 203 204 20 0 chr3R 1119248 1119297 -26785756 + (CAA)n Simple_repeat Simple_repeat 1 50 0 4 593 215 163 23 0 chr3R 1119539 1119582 -26785471 + (TTGTG)n Simple_repeat Simple_repeat 1 44 0 4 593 216 239 0 0 chr3R 1120410 1120456 -26784597 + (CGG)n Simple_repeat Simple_repeat 1 46 0 4 593 21 36 0 0 chr3R 1124680 1124708 -26780345 + AT_rich Low_complexity Low_complexity 1 28 0 4 593 243 224 0 17 chr3R 1127092 1127151 -26777902 - DNAREP1_DM LINE Penelope -11 583 526 4 593 214 179 0 0 chr3R 1128714 1128753 -26776300 + (CATA)n Simple_repeat Simple_repeat 1 39 0 4 593 207 176 0 0 chr3R 1133032 1133066 -26771987 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 4 593 23 33 0 0 chr3R 1133625 1133655 -26771398 + AT_rich Low_complexity Low_complexity 1 30 0 4 593 215 103 0 25 chr3R 1133946 1133986 -26771067 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 593 517 144 186 0 chr3R 1135639 1135736 -26769317 + DMRP1 Unknown Unknown 2 116 -230 4 593 798 133 0 133 chr3R 1135753 1135926 -26769127 + DMRP1 Unknown Unknown 197 346 0 4 593 180 77 0 0 chr3R 1137477 1137503 -26767550 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 4 593 240 59 0 0 chr3R 1137811 1137845 -26767208 + (TAA)n Simple_repeat Simple_repeat 2 35 0 4 593 180 152 0 0 chr3R 1140127 1140160 -26764893 + CT-rich Low_complexity Low_complexity 2 34 0 4 593 195 42 0 0 chr3R 1140905 1140929 -26764124 + (ATG)n Simple_repeat Simple_repeat 3 26 0 4 593 23 33 0 0 chr3R 1147701 1147731 -26757322 + AT_rich Low_complexity Low_complexity 1 30 0 4 593 24 32 0 0 chr3R 1149364 1149395 -26755658 + AT_rich Low_complexity Low_complexity 1 31 0 4 593 327 65 0 0 chr3R 1160303 1160349 -26744704 + (TGG)n Simple_repeat Simple_repeat 1 46 0 4 593 35383 3 0 0 chr3R 1164176 1169203 -26735850 - DMRT1B LINE R1 0 5183 156 4 593 254 272 12 12 chr3R 1174224 1174306 -26730747 - DNAREP1_DM LINE Penelope -512 82 1 4 593 204 229 0 0 chr3R 1175420 1175468 -26729585 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 593 22 0 0 0 chr3R 1175876 1175898 -26729155 + AT_rich Low_complexity Low_complexity 1 22 0 4 594 24 32 0 0 chr3R 1184563 1184594 -26720459 + AT_rich Low_complexity Low_complexity 1 31 0 4 594 12625 58 21 4 chr3R 1191089 1192717 -26712336 - FB4_DM DNA Tc1 -1329 2760 1105 4 594 273 25 23 70 chr3R 1192684 1192727 -26712326 + FB4_DM DNA Tc1 2728 2768 -1321 4 594 27 62 0 0 chr3R 1194556 1194604 -26710449 + AT_rich Low_complexity Low_complexity 1 48 0 4 594 180 0 0 0 chr3R 1194999 1195019 -26710034 + (T)n Simple_repeat Simple_repeat 1 20 0 4 594 27 29 0 0 chr3R 1197239 1197273 -26707780 + AT_rich Low_complexity Low_complexity 1 34 0 4 594 421 194 82 0 chr3R 1200442 1200540 -26704513 - I_DM LINE I -760 5471 5366 4 594 207 218 18 0 chr3R 1201310 1201365 -26703688 + (CAG)n Simple_repeat Simple_repeat 2 57 0 4 594 23 68 0 0 chr3R 1202127 1202171 -26702882 + AT_rich Low_complexity Low_complexity 1 44 0 4 594 299 200 118 32 chr3R 1212379 1212472 -26692581 + DNAREP1_DM LINE Penelope 1 101 -493 4 594 24 0 0 0 chr3R 1215242 1215266 -26689787 + AT_rich Low_complexity Low_complexity 1 24 0 4 594 22 56 0 0 chr3R 1216739 1216775 -26688278 + AT_rich Low_complexity Low_complexity 1 36 0 4 594 215 295 0 0 chr3R 1218447 1218508 -26686545 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 594 208 274 0 0 chr3R 1219963 1220025 -26685028 + (CGGAG)n Simple_repeat Simple_repeat 1 62 0 4 594 230 161 0 18 chr3R 1221928 1221985 -26683068 + ROO_I LTR Pao 641 696 -7560 4 594 21 0 0 0 chr3R 1222876 1222897 -26682156 + AT_rich Low_complexity Low_complexity 1 21 0 4 594 30 27 0 0 chr3R 1223051 1223088 -26681965 + AT_rich Low_complexity Low_complexity 1 37 0 4 594 23 54 0 0 chr3R 1229195 1229232 -26675821 + AT_rich Low_complexity Low_complexity 1 37 0 4 594 189 0 0 0 chr3R 1230383 1230404 -26674649 + (C)n Simple_repeat Simple_repeat 1 21 0 4 594 216 0 0 0 chr3R 1231827 1231851 -26673202 + (TTG)n Simple_repeat Simple_repeat 1 24 0 4 594 29 0 0 0 chr3R 1237841 1237870 -26667183 + AT_rich Low_complexity Low_complexity 1 29 0 4 594 222 37 0 0 chr3R 1238092 1238119 -26666934 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 594 215 150 25 0 chr3R 1238471 1238511 -26666542 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 594 27 29 0 0 chr3R 1239864 1239898 -26665155 + AT_rich Low_complexity Low_complexity 1 34 0 4 594 183 100 0 0 chr3R 1240105 1240135 -26664918 + (CAGAG)n Simple_repeat Simple_repeat 4 33 0 4 594 180 0 0 0 chr3R 1240749 1240769 -26664284 + (TG)n Simple_repeat Simple_repeat 2 21 0 4 594 352 102 0 55 chr3R 1242534 1242607 -26662446 + (CAG)n Simple_repeat Simple_repeat 3 71 0 4 594 21 0 0 0 chr3R 1243389 1243410 -26661643 + AT_rich Low_complexity Low_complexity 1 21 0 4 594 187 93 23 23 chr3R 1244952 1244996 -26660057 + (TATAA)n Simple_repeat Simple_repeat 1 44 0 4 594 469 214 147 65 chr3R 1246717 1246887 -26658166 - DNAREP1_DM LINE Penelope -136 458 275 4 594 24 0 0 0 chr3R 1247012 1247036 -26658017 + AT_rich Low_complexity Low_complexity 1 24 0 4 594 258 140 0 20 chr3R 1250004 1250055 -26654998 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 594 214 205 0 0 chr3R 1259289 1259328 -26645725 + (TATG)n Simple_repeat Simple_repeat 1 39 0 4 594 23 0 0 0 chr3R 1265245 1265268 -26639785 + AT_rich Low_complexity Low_complexity 1 23 0 4 594 25 0 0 0 chr3R 1267785 1267810 -26637243 + AT_rich Low_complexity Low_complexity 1 25 0 4 594 22 0 0 0 chr3R 1268920 1268942 -26636111 + AT_rich Low_complexity Low_complexity 1 22 0 4 594 4504 31 0 2 chr3R 1268950 1269491 -26635562 - G4_DM LINE Jockey 0 3856 3317 4 594 2477 7 0 4 chr3R 1271737 1272013 -26633040 + BURDOCK_LTR LTR Gypsy 1 275 0 4 594 54023 2 2 0 chr3R 1272013 1277863 -26627190 + BURDOCK_I LTR Gypsy 1 5860 0 4 594 2461 7 0 4 chr3R 1277864 1278140 -26626913 + BURDOCK_LTR LTR Gypsy 1 275 0 4 594 252 143 0 0 chr3R 1280223 1280265 -26624788 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 4 594 24 32 0 0 chr3R 1280794 1280825 -26624228 + AT_rich Low_complexity Low_complexity 1 31 0 4 594 255 31 0 0 chr3R 1282082 1282114 -26622939 + (CAAGT)n Simple_repeat Simple_repeat 4 35 0 4 594 23 78 0 0 chr3R 1296395 1296446 -26608607 + AT_rich Low_complexity Low_complexity 1 51 0 4 594 31 76 0 0 chr3R 1296479 1296545 -26608508 + AT_rich Low_complexity Low_complexity 1 66 0 4 594 222 200 46 0 chr3R 1304527 1304592 -26600461 + A-rich Low_complexity Low_complexity 1 68 0 4 594 462 36 0 0 chr3R 1305979 1306035 -26599018 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 594 30 0 0 0 chr3R 1309863 1309893 -26595160 + AT_rich Low_complexity Low_complexity 1 30 0 4 594 43 35 0 0 chr3R 1309912 1309969 -26595084 + AT_rich Low_complexity Low_complexity 1 57 0 4 595 33 73 0 0 chr3R 1311087 1311155 -26593898 + AT_rich Low_complexity Low_complexity 1 68 0 4 595 22 0 0 0 chr3R 1311177 1311199 -26593854 + AT_rich Low_complexity Low_complexity 1 22 0 4 595 286 208 101 44 chr3R 1314042 1314179 -26590874 - PENELOPE LINE Penelope -145 4016 3898 4 595 225 0 0 0 chr3R 1321014 1321039 -26584014 + (CATTT)n Simple_repeat Simple_repeat 1 25 0 4 595 23 0 0 0 chr3R 1321896 1321919 -26583134 + AT_rich Low_complexity Low_complexity 1 23 0 4 595 22 0 0 0 chr3R 1327602 1327624 -26577429 + AT_rich Low_complexity Low_complexity 1 22 0 4 595 189 147 0 0 chr3R 1328290 1328324 -26576729 + (TTCGGG)n Simple_repeat Simple_repeat 3 36 0 4 595 29 47 0 0 chr3R 1329019 1329062 -26575991 + AT_rich Low_complexity Low_complexity 1 43 0 4 595 225 211 0 0 chr3R 1329816 1329873 -26575180 + (TTGG)n Simple_repeat Simple_repeat 3 59 0 4 595 29 78 0 0 chr3R 1330116 1330180 -26574873 + AT_rich Low_complexity Low_complexity 1 64 0 4 595 26 30 0 0 chr3R 1331040 1331073 -26573980 + AT_rich Low_complexity Low_complexity 1 33 0 4 595 1390 122 115 85 chr3R 1334072 1334402 -26570651 - DMRP1 Unknown Unknown -6 340 1 4 595 25 0 0 0 chr3R 1334449 1334474 -26570579 + AT_rich Low_complexity Low_complexity 1 25 0 4 595 187 56 83 0 chr3R 1334710 1334746 -26570307 + (TATATG)n Simple_repeat Simple_repeat 3 41 0 4 595 201 39 0 0 chr3R 1336854 1336880 -26568173 + (CATAT)n Simple_repeat Simple_repeat 1 26 0 4 595 192 135 0 0 chr3R 1336896 1336933 -26568120 + (GA)n Simple_repeat Simple_repeat 2 38 0 4 595 25 0 0 0 chr3R 1338251 1338276 -26566777 + AT_rich Low_complexity Low_complexity 1 25 0 4 595 28 48 0 0 chr3R 1339653 1339695 -26565358 + AT_rich Low_complexity Low_complexity 1 42 0 4 595 22 0 0 0 chr3R 1341250 1341272 -26563781 + AT_rich Low_complexity Low_complexity 1 22 0 4 595 454 210 48 14 chr3R 1344295 1344440 -26560613 - DNAREP1_DM LINE Penelope -241 353 204 4 595 237 108 0 0 chr3R 1344551 1344588 -26560465 + (GA)n Simple_repeat Simple_repeat 2 38 0 4 595 21 36 0 0 chr3R 1345125 1345153 -26559900 + AT_rich Low_complexity Low_complexity 1 28 0 4 595 209 204 0 0 chr3R 1348653 1348697 -26556356 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 595 235 109 0 68 chr3R 1351838 1351897 -26553156 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 4 595 23 0 0 0 chr3R 1353135 1353158 -26551895 + AT_rich Low_complexity Low_complexity 1 23 0 4 595 21 0 0 0 chr3R 1359409 1359430 -26545623 + AT_rich Low_complexity Low_complexity 1 21 0 4 595 26 0 0 0 chr3R 1364864 1364890 -26540163 + AT_rich Low_complexity Low_complexity 1 26 0 4 595 25 0 0 0 chr3R 1372516 1372541 -26532512 + AT_rich Low_complexity Low_complexity 1 25 0 4 595 40 0 0 0 chr3R 1373764 1373804 -26531249 + AT_rich Low_complexity Low_complexity 1 40 0 4 595 27 73 0 0 chr3R 1373821 1373876 -26531177 + AT_rich Low_complexity Low_complexity 1 55 0 4 595 24 0 0 0 chr3R 1374062 1374086 -26530967 + AT_rich Low_complexity Low_complexity 1 24 0 4 595 22 35 0 0 chr3R 1375203 1375232 -26529821 + AT_rich Low_complexity Low_complexity 1 29 0 4 595 21 71 0 0 chr3R 1376591 1376633 -26528420 + AT_rich Low_complexity Low_complexity 1 42 0 4 595 214 29 0 54 chr3R 1377026 1377063 -26527990 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 595 542 195 243 17 chr3R 1377163 1377454 -26527599 + DNAREP1_DM LINE Penelope 3 342 -252 4 595 2427 104 123 162 chr3R 1377474 1378092 -26526961 + DNAREP1_DM LINE Penelope 1 594 0 4 595 379 0 37 110 chr3R 1378782 1378946 -26526107 + (TTA)n Simple_repeat Simple_repeat 1 152 0 4 595 43 20 0 0 chr3R 1380293 1380343 -26524710 + AT_rich Low_complexity Low_complexity 1 50 0 4 595 1861 54 91 14 chr3R 1380349 1380628 -26524425 - G5A_DM LINE Jockey 0 2841 2562 4 595 24 0 0 0 chr3R 1390465 1390489 -26514564 + AT_rich Low_complexity Low_complexity 1 24 0 4 595 26 0 0 0 chr3R 1402276 1402302 -26502751 + AT_rich Low_complexity Low_complexity 1 26 0 4 595 35 54 0 0 chr3R 1402415 1402471 -26502582 + AT_rich Low_complexity Low_complexity 1 56 0 4 595 23 68 0 0 chr3R 1404816 1404860 -26500193 + AT_rich Low_complexity Low_complexity 1 44 0 4 595 21 36 0 0 chr3R 1406031 1406059 -26498994 + AT_rich Low_complexity Low_complexity 1 28 0 4 595 205 261 0 0 chr3R 1408482 1408528 -26496525 + CT-rich Low_complexity Low_complexity 2 47 0 4 595 26 0 0 0 chr3R 1414443 1414469 -26490584 + AT_rich Low_complexity Low_complexity 1 26 0 4 595 200 86 0 28 chr3R 1425835 1425871 -26479182 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 595 23 0 0 0 chr3R 1432407 1432430 -26472623 + AT_rich Low_complexity Low_complexity 1 23 0 4 595 180 176 0 0 chr3R 1432913 1432947 -26472106 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 595 23 33 0 0 chr3R 1432984 1433014 -26472039 + AT_rich Low_complexity Low_complexity 1 30 0 4 595 21 36 0 0 chr3R 1433071 1433099 -26471954 + AT_rich Low_complexity Low_complexity 1 28 0 4 595 23 0 0 0 chr3R 1433916 1433939 -26471114 + AT_rich Low_complexity Low_complexity 1 23 0 4 595 242 351 0 19 chr3R 1434371 1434528 -26470525 + (CCG)n Simple_repeat Simple_repeat 3 156 0 4 595 219 69 0 0 chr3R 1436076 1436105 -26468948 + (CTG)n Simple_repeat Simple_repeat 3 31 0 4 595 181 75 50 0 chr3R 1438260 1438300 -26466753 + (GA)n Simple_repeat Simple_repeat 2 43 0 4 595 255 415 0 0 chr3R 1441418 1441570 -26463483 + (CGG)n Simple_repeat Simple_repeat 2 153 0 4 596 21 0 0 0 chr3R 1442376 1442397 -26462656 + AT_rich Low_complexity Low_complexity 1 21 0 4 596 21 36 0 0 chr3R 1448756 1448784 -26456269 + AT_rich Low_complexity Low_complexity 1 28 0 4 596 189 0 0 0 chr3R 1452998 1453019 -26452034 + (TTA)n Simple_repeat Simple_repeat 1 21 0 4 596 195 129 0 0 chr3R 1459187 1459218 -26445835 + (CATA)n Simple_repeat Simple_repeat 2 32 0 4 596 23 0 0 0 chr3R 1460220 1460243 -26444810 + AT_rich Low_complexity Low_complexity 1 23 0 4 596 212 192 12 60 chr3R 1462840 1462923 -26442130 + (TTATA)n Simple_repeat Simple_repeat 4 82 0 4 596 188 149 21 0 chr3R 1464528 1464575 -26440478 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 596 44 0 0 0 chr3R 1465719 1465763 -26439290 + AT_rich Low_complexity Low_complexity 1 44 0 4 596 219 227 0 0 chr3R 1469385 1469429 -26435624 + (CTG)n Simple_repeat Simple_repeat 1 44 0 4 596 249 175 16 16 chr3R 1469586 1469650 -26435403 + A-rich Low_complexity Low_complexity 1 64 0 4 596 28 29 0 0 chr3R 1470406 1470441 -26434612 + AT_rich Low_complexity Low_complexity 1 35 0 4 596 203 132 53 0 chr3R 1471794 1471832 -26433221 + (CACTC)n Simple_repeat Simple_repeat 3 42 0 4 596 252 212 14 43 chr3R 1474085 1474154 -26430899 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 596 26 0 0 0 chr3R 1474610 1474636 -26430417 + AT_rich Low_complexity Low_complexity 1 26 0 4 596 22 35 0 0 chr3R 1478574 1478603 -26426450 + AT_rich Low_complexity Low_complexity 1 29 0 4 596 194 100 0 70 chr3R 1483154 1483197 -26421856 + CT-rich Low_complexity Low_complexity 3 42 0 4 596 30 45 0 0 chr3R 1486041 1486085 -26418968 + AT_rich Low_complexity Low_complexity 1 44 0 4 596 24 32 0 0 chr3R 1486196 1486227 -26418826 + AT_rich Low_complexity Low_complexity 1 31 0 4 596 23 0 0 0 chr3R 1488318 1488341 -26416712 + AT_rich Low_complexity Low_complexity 1 23 0 4 596 207 340 11 11 chr3R 1490629 1490724 -26414329 + (CGG)n Simple_repeat Simple_repeat 3 97 0 4 596 24 0 0 0 chr3R 1495233 1495257 -26409796 + AT_rich Low_complexity Low_complexity 1 24 0 4 596 278 206 20 30 chr3R 1495601 1495701 -26409352 + ROO_I LTR Pao 637 735 -7521 4 596 25 0 0 0 chr3R 1498645 1498670 -26406383 + AT_rich Low_complexity Low_complexity 1 25 0 4 596 3404 100 100 18 chr3R 1502378 1502927 -26402126 - DNAREP1_DM LINE Penelope 0 594 1 4 596 201 373 0 0 chr3R 1503951 1504069 -26400984 + (CAG)n Simple_repeat Simple_repeat 1 118 0 4 596 22 56 0 0 chr3R 1505489 1505525 -26399528 + AT_rich Low_complexity Low_complexity 1 36 0 4 596 228 312 0 0 chr3R 1512105 1512185 -26392868 + CT-rich Low_complexity Low_complexity 3 82 0 4 596 214 297 16 0 chr3R 1517005 1517069 -26387984 + (CTG)n Simple_repeat Simple_repeat 2 66 0 4 596 454 250 0 31 chr3R 1519319 1519447 -26385606 + DNAREP1_DM LINE Penelope 1 124 -470 4 596 798 144 44 38 chr3R 1519448 1519607 -26385446 + DNAREP1_DM LINE Penelope 358 517 -77 4 596 213 121 0 0 chr3R 1519944 1519977 -26385076 + (CAA)n Simple_repeat Simple_repeat 3 35 0 4 596 217 174 0 21 chr3R 1520016 1520063 -26384990 + (CAA)n Simple_repeat Simple_repeat 1 46 0 4 596 253 224 0 0 chr3R 1521385 1521434 -26383619 - DNAREP1_DM LINE Penelope -523 71 23 4 596 35 0 0 0 chr3R 1521816 1521851 -26383202 + AT_rich Low_complexity Low_complexity 1 35 0 4 596 209 189 0 36 chr3R 1522052 1522107 -26382946 + (CAA)n Simple_repeat Simple_repeat 1 53 0 4 596 21 57 0 0 chr3R 1525039 1525074 -26379979 + AT_rich Low_complexity Low_complexity 1 35 0 4 596 546 75 0 0 chr3R 1526916 1526996 -26378057 + (TC)n Simple_repeat Simple_repeat 2 81 0 4 596 240 35 0 0 chr3R 1527436 1527465 -26377588 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 596 24 0 0 0 chr3R 1529461 1529485 -26375568 + AT_rich Low_complexity Low_complexity 1 24 0 4 596 28 0 0 0 chr3R 1532304 1532332 -26372721 + AT_rich Low_complexity Low_complexity 1 28 0 4 596 189 107 0 0 chr3R 1539336 1539364 -26365689 + (CCG)n Simple_repeat Simple_repeat 1 28 0 4 596 279 0 0 0 chr3R 1539873 1539904 -26365149 + (CTG)n Simple_repeat Simple_repeat 1 31 0 4 596 261 98 0 0 chr3R 1542135 1542176 -26362877 + (CTG)n Simple_repeat Simple_repeat 3 43 0 4 596 213 167 0 0 chr3R 1542228 1542282 -26362771 + (CTG)n Simple_repeat Simple_repeat 2 55 0 4 596 21 36 0 0 chr3R 1543056 1543084 -26361969 + AT_rich Low_complexity Low_complexity 1 28 0 4 596 204 111 0 0 chr3R 1549152 1549188 -26355865 + (CAT)n Simple_repeat Simple_repeat 3 38 0 4 596 21 0 0 0 chr3R 1549243 1549264 -26355789 + AT_rich Low_complexity Low_complexity 1 21 0 4 596 180 0 0 0 chr3R 1551966 1551986 -26353067 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 596 1017 169 5 29 chr3R 1554253 1554460 -26350593 + DNAREP1_DM LINE Penelope 1 202 -392 4 596 326 89 0 0 chr3R 1554443 1554488 -26350565 + DNAREP1_DM LINE Penelope 433 477 -117 4 596 22 0 0 0 chr3R 1557286 1557308 -26347745 + AT_rich Low_complexity Low_complexity 1 22 0 4 596 457 79 0 45 chr3R 1558028 1558094 -26346959 + DNAREP1_DM LINE Penelope 3 65 -529 4 596 536 120 62 107 chr3R 1558100 1558212 -26346841 + DNAREP1_DM LINE Penelope 353 459 -135 4 596 561 324 50 15 chr3R 1558614 1558874 -26346179 - Jockey2 LINE Jockey -316 3112 2844 4 596 33 73 0 0 chr3R 1562255 1562323 -26342730 + AT_rich Low_complexity Low_complexity 1 68 0 4 596 25 31 0 0 chr3R 1569972 1570004 -26335049 + AT_rich Low_complexity Low_complexity 1 32 0 4 596 212 136 45 0 chr3R 1570109 1570153 -26334900 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 596 211 191 14 14 chr3R 1571572 1571641 -26333412 + (TA)n Simple_repeat Simple_repeat 2 70 0 4 596 1699 0 0 0 chr3R 1571789 1571975 -26333078 + POGON1 DNA Pogo 1 186 0 4 74 2040 5 0 0 chr3R 1572792 1573016 -26332037 + DIVER_LTR LTR Pao 1 224 0 4 597 52804 2 0 0 chr3R 1573037 1578680 -26326373 + DIVER_I LTR Pao 1 5643 0 4 597 2040 5 0 0 chr3R 1578680 1578904 -26326149 + DIVER_LTR LTR Pao 1 224 0 4 597 22 0 0 0 chr3R 1582447 1582469 -26322584 + AT_rich Low_complexity Low_complexity 1 22 0 4 597 22 0 0 0 chr3R 1582807 1582829 -26322224 + AT_rich Low_complexity Low_complexity 1 22 0 4 597 422 185 134 36 chr3R 1589252 1589364 -26315689 + DNAREP1_DM LINE Penelope 414 536 -58 4 597 3153 40 5 3 chr3R 1589569 1589947 -26315106 - STALKER4_LTR LTR Gypsy -23 379 1 4 597 293 178 259 45 chr3R 1592266 1592378 -26312675 - DNAREP1_DM LINE Penelope -154 440 305 4 597 23 33 0 0 chr3R 1596101 1596131 -26308922 + AT_rich Low_complexity Low_complexity 1 30 0 4 597 246 321 0 0 chr3R 1599755 1599839 -26305214 + (GCTG)n Simple_repeat Simple_repeat 3 86 0 4 597 28 0 0 0 chr3R 1603129 1603157 -26301896 + AT_rich Low_complexity Low_complexity 1 28 0 4 597 482 217 19 0 chr3R 1603912 1604018 -26301035 + DNAREP1_DM LINE Penelope 1 108 -486 4 597 652 160 158 49 chr3R 1604024 1604208 -26300845 + DNAREP1_DM LINE Penelope 382 585 -9 4 597 21 0 0 0 chr3R 1604830 1604851 -26300202 + AT_rich Low_complexity Low_complexity 1 21 0 4 597 250 240 0 0 chr3R 1606355 1606405 -26298648 + (CATA)n Simple_repeat Simple_repeat 4 53 0 4 597 29 60 0 0 chr3R 1608347 1608397 -26296656 + AT_rich Low_complexity Low_complexity 1 50 0 4 597 34 42 0 0 chr3R 1613033 1613081 -26291972 + AT_rich Low_complexity Low_complexity 1 48 0 4 597 200 312 0 0 chr3R 1616300 1616364 -26288689 + GA-rich Low_complexity Low_complexity 1 64 0 4 597 33 25 0 0 chr3R 1621806 1621846 -26283207 + AT_rich Low_complexity Low_complexity 1 40 0 4 597 22 0 0 0 chr3R 1626731 1626753 -26278300 + AT_rich Low_complexity Low_complexity 1 22 0 4 597 306 87 0 0 chr3R 1627934 1627980 -26277073 + (CCGAA)n Simple_repeat Simple_repeat 1 46 0 4 597 24 53 0 0 chr3R 1631021 1631059 -26273994 + AT_rich Low_complexity Low_complexity 1 38 0 4 597 213 121 0 0 chr3R 1633259 1633292 -26271761 + (TAA)n Simple_repeat Simple_repeat 3 35 0 4 597 1699 0 0 0 chr3R 1634888 1635074 -26269979 - POGON1 DNA Pogo 0 186 1 4 597 262 67 22 22 chr3R 1637212 1637258 -26267795 + (TA)n Simple_repeat Simple_repeat 1 46 0 4 597 22 70 0 0 chr3R 1638725 1638768 -26266285 + AT_rich Low_complexity Low_complexity 1 43 0 4 597 204 67 0 0 chr3R 1641378 1641408 -26263645 + (TA)n Simple_repeat Simple_repeat 2 31 0 4 597 22 70 0 0 chr3R 1641782 1641825 -26263228 + AT_rich Low_complexity Low_complexity 1 43 0 4 597 219 69 0 0 chr3R 1642191 1642220 -26262833 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 597 23 33 0 0 chr3R 1647449 1647479 -26257574 + AT_rich Low_complexity Low_complexity 1 30 0 4 597 9420 20 2 4 chr3R 1648156 1649263 -26255790 - PROTOP_A DNA P 0 1105 1 4 597 27 29 0 0 chr3R 1650392 1650426 -26254627 + AT_rich Low_complexity Low_complexity 1 34 0 4 597 21 36 0 0 chr3R 1651428 1651456 -26253597 + AT_rich Low_complexity Low_complexity 1 28 0 4 597 21 0 0 0 chr3R 1652266 1652287 -26252766 + AT_rich Low_complexity Low_complexity 1 21 0 4 597 26699 31 28 3 chr3R 1652490 1655641 -26249412 - G5_DM LINE Jockey 0 4856 1628 4 597 21 0 0 0 chr3R 1659093 1659114 -26245939 + AT_rich Low_complexity Low_complexity 1 21 0 4 597 404 55 0 127 chr3R 1662184 1662247 -26242806 - DNAREP1_DM LINE Penelope -115 479 425 4 597 485 121 141 0 chr3R 1662279 1662378 -26242675 - DNAREP1_DM LINE Penelope -481 113 1 4 597 28 0 0 0 chr3R 1665298 1665326 -26239727 + AT_rich Low_complexity Low_complexity 1 28 0 4 597 299 194 29 15 chr3R 1665595 1665663 -26239390 - DNAREP1_DM LINE Penelope -504 90 22 4 597 25 31 0 0 chr3R 1667473 1667505 -26237548 + AT_rich Low_complexity Low_complexity 1 32 0 4 597 236 218 0 18 chr3R 1669374 1669430 -26235623 + (TATAG)n Simple_repeat Simple_repeat 1 55 0 4 597 36 0 0 0 chr3R 1672817 1672853 -26232200 + AT_rich Low_complexity Low_complexity 1 36 0 4 597 202 61 61 0 chr3R 1674031 1674064 -26230989 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 4 597 201 195 0 0 chr3R 1674486 1674527 -26230526 + (CATA)n Simple_repeat Simple_repeat 3 43 0 4 597 279 197 0 16 chr3R 1677673 1677735 -26227318 - FB4_DM DNA Tc1 -4028 61 1 4 597 21 0 0 0 chr3R 1678417 1678438 -26226615 + AT_rich Low_complexity Low_complexity 1 21 0 4 597 25 51 0 0 chr3R 1679073 1679112 -26225941 + AT_rich Low_complexity Low_complexity 1 39 0 4 597 180 152 0 0 chr3R 1680867 1680900 -26224153 + T-rich Low_complexity Low_complexity 1 33 0 4 597 38 68 0 0 chr3R 1681275 1681348 -26223705 + AT_rich Low_complexity Low_complexity 1 73 0 4 597 21 36 0 0 chr3R 1681382 1681410 -26223643 + AT_rich Low_complexity Low_complexity 1 28 0 4 597 28 29 0 0 chr3R 1682359 1682394 -26222659 + AT_rich Low_complexity Low_complexity 1 35 0 4 597 21 0 0 0 chr3R 1685302 1685323 -26219730 + AT_rich Low_complexity Low_complexity 1 21 0 4 597 202 216 0 0 chr3R 1686015 1686052 -26219001 + (CTG)n Simple_repeat Simple_repeat 1 37 0 4 597 203 156 0 0 chr3R 1686258 1686290 -26218763 + (CATA)n Simple_repeat Simple_repeat 3 34 0 4 597 192 77 0 0 chr3R 1689305 1689331 -26215722 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 597 30 45 0 0 chr3R 1693085 1693129 -26211924 + AT_rich Low_complexity Low_complexity 1 44 0 4 597 34 24 0 0 chr3R 1693226 1693267 -26211786 + AT_rich Low_complexity Low_complexity 1 41 0 4 597 23 0 0 0 chr3R 1695210 1695233 -26209820 + AT_rich Low_complexity Low_complexity 1 23 0 4 597 242 125 0 20 chr3R 1698878 1698927 -26206126 + (CAA)n Simple_repeat Simple_repeat 1 48 0 4 597 22 0 0 0 chr3R 1701331 1701353 -26203700 + AT_rich Low_complexity Low_complexity 1 22 0 4 597 213 226 0 0 chr3R 1702550 1702603 -26202450 + (TCG)n Simple_repeat Simple_repeat 2 54 0 4 597 291 130 0 0 chr3R 1703163 1703217 -26201836 + (CTG)n Simple_repeat Simple_repeat 3 56 0 4 597 242 174 29 14 chr3R 1703264 1703334 -26201719 - ROO_I LTR Pao -7511 745 675 4 597 198 150 0 0 chr3R 1703441 1703481 -26201572 + (CTG)n Simple_repeat Simple_repeat 2 41 0 4 598 1213 144 126 19 chr3R 1704930 1705192 -26199861 + DMRP1 Unknown Unknown 2 291 -55 4 598 21 0 0 0 chr3R 1705954 1705975 -26199078 + AT_rich Low_complexity Low_complexity 1 21 0 4 598 189 147 0 0 chr3R 1707273 1707307 -26197746 + (CATAC)n Simple_repeat Simple_repeat 2 35 0 4 598 246 32 0 0 chr3R 1708245 1708276 -26196777 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 598 27 0 0 0 chr3R 1709606 1709633 -26195420 + AT_rich Low_complexity Low_complexity 1 27 0 4 598 21 71 0 0 chr3R 1713496 1713538 -26191515 + AT_rich Low_complexity Low_complexity 1 42 0 4 598 294 143 0 0 chr3R 1713796 1713845 -26191208 + (TGGA)n Simple_repeat Simple_repeat 4 52 0 4 598 21 0 0 0 chr3R 1714491 1714512 -26190541 + AT_rich Low_complexity Low_complexity 1 21 0 4 598 294 29 0 0 chr3R 1715085 1715120 -26189933 + (GGATG)n Simple_repeat Simple_repeat 3 37 0 4 598 271 0 0 49 chr3R 1718252 1718293 -26186760 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 4 598 22 0 0 0 chr3R 1719077 1719099 -26185954 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 232 234 0 0 chr3R 1721273 1721320 -26183733 + (GAGTG)n Simple_repeat Simple_repeat 2 48 0 4 598 230 116 23 0 chr3R 1723725 1723768 -26181285 + (TTTTTG)n Simple_repeat Simple_repeat 3 46 0 4 598 22 35 0 0 chr3R 1726579 1726608 -26178445 + AT_rich Low_complexity Low_complexity 1 29 0 4 598 21 0 0 0 chr3R 1727123 1727144 -26177909 + AT_rich Low_complexity Low_complexity 1 21 0 4 598 29 0 0 0 chr3R 1727592 1727621 -26177432 + AT_rich Low_complexity Low_complexity 1 29 0 4 598 24 32 0 0 chr3R 1729140 1729171 -26175882 + AT_rich Low_complexity Low_complexity 1 31 0 4 598 21 0 0 0 chr3R 1729780 1729801 -26175252 + AT_rich Low_complexity Low_complexity 1 21 0 4 598 202 236 0 18 chr3R 1734866 1734922 -26170131 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 598 204 282 14 0 chr3R 1735094 1735165 -26169888 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 598 22 0 0 0 chr3R 1739238 1739260 -26165793 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 30 0 0 0 chr3R 1739424 1739454 -26165599 + AT_rich Low_complexity Low_complexity 1 30 0 4 598 21 71 0 0 chr3R 1739476 1739518 -26165535 + AT_rich Low_complexity Low_complexity 1 42 0 4 598 301 195 13 0 chr3R 1743058 1743135 -26161918 - ROO_I LTR Pao -7527 729 652 4 598 323 180 44 12 chr3R 1744618 1744703 -26160350 + DNAREP1_DM LINE Penelope 429 484 -110 4 598 32 43 0 0 chr3R 1746905 1746951 -26158102 + AT_rich Low_complexity Low_complexity 1 46 0 4 598 212 227 0 0 chr3R 1751614 1751658 -26153395 + (CCCCAG)n Simple_repeat Simple_repeat 2 45 0 4 598 1673 0 5 0 chr3R 1753335 1753520 -26151533 + POGON1 DNA Pogo 1 186 0 4 598 182 220 17 0 chr3R 1758789 1758848 -26146205 + (GCTG)n Simple_repeat Simple_repeat 3 62 0 4 598 667 93 21 0 chr3R 1759274 1759371 -26145682 - DNAREP1_DM LINE Penelope 0 594 496 4 598 220 195 0 0 chr3R 1765560 1765601 -26139452 + (CTG)n Simple_repeat Simple_repeat 3 43 0 4 598 21 0 0 0 chr3R 1771790 1771811 -26133242 + AT_rich Low_complexity Low_complexity 1 21 0 4 598 21 57 0 0 chr3R 1777029 1777064 -26127989 + AT_rich Low_complexity Low_complexity 1 35 0 4 598 315 154 0 0 chr3R 1777739 1777804 -26127249 + (CAGC)n Simple_repeat Simple_repeat 4 68 0 4 598 22 0 0 0 chr3R 1778894 1778916 -26126137 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 22 0 0 0 chr3R 1780015 1780037 -26125016 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 195 42 0 0 chr3R 1780935 1780959 -26124094 + (TTCGG)n Simple_repeat Simple_repeat 2 25 0 4 598 23 0 0 0 chr3R 1781905 1781928 -26123125 + AT_rich Low_complexity Low_complexity 1 23 0 4 598 223 227 0 98 chr3R 1783377 1783499 -26121554 + T-rich Low_complexity Low_complexity 4 113 0 4 598 25 0 0 0 chr3R 1784952 1784977 -26120076 + AT_rich Low_complexity Low_complexity 1 25 0 4 598 22 0 0 0 chr3R 1787411 1787433 -26117620 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 239 167 16 32 chr3R 1787551 1787613 -26117440 + (TTCA)n Simple_repeat Simple_repeat 2 62 0 4 598 213 279 0 0 chr3R 1788661 1788729 -26116324 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 598 27 0 0 0 chr3R 1793357 1793384 -26111669 + AT_rich Low_complexity Low_complexity 1 27 0 4 598 266 73 0 24 chr3R 1795852 1795894 -26109159 + (CAATC)n Simple_repeat Simple_repeat 5 45 0 4 598 24 53 0 0 chr3R 1799596 1799634 -26105419 + AT_rich Low_complexity Low_complexity 1 38 0 4 598 183 80 0 0 chr3R 1800559 1800584 -26104469 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 598 35 54 0 0 chr3R 1801842 1801898 -26103155 + AT_rich Low_complexity Low_complexity 1 56 0 4 598 23 33 0 0 chr3R 1801907 1801937 -26103116 + AT_rich Low_complexity Low_complexity 1 30 0 4 598 286 211 0 62 chr3R 1803556 1803652 -26101401 + ROO_I LTR Pao 655 744 -7512 4 598 21 0 0 0 chr3R 1806518 1806539 -26098514 + AT_rich Low_complexity Low_complexity 1 21 0 4 598 192 158 0 0 chr3R 1806790 1806828 -26098225 + (GAATG)n Simple_repeat Simple_repeat 3 40 0 4 598 207 88 0 0 chr3R 1812091 1812125 -26092928 + (CATTC)n Simple_repeat Simple_repeat 3 36 0 4 598 322 167 0 0 chr3R 1814116 1814170 -26090883 - DNAREP1_DM LINE Penelope -540 54 1 4 598 22 0 0 0 chr3R 1819666 1819688 -26085365 + AT_rich Low_complexity Low_complexity 1 22 0 4 598 1052 55 10 53 chr3R 1821345 1821511 -26083542 - G5A_DM LINE Jockey 0 2841 2700 4 598 24 0 0 0 chr3R 1822294 1822318 -26082735 + AT_rich Low_complexity Low_complexity 1 24 0 4 598 183 139 0 0 chr3R 1826971 1827007 -26078046 + (CCG)n Simple_repeat Simple_repeat 2 37 0 4 598 29 0 0 0 chr3R 1827659 1827688 -26077365 + AT_rich Low_complexity Low_complexity 1 29 0 4 598 230 160 20 0 chr3R 1828840 1828890 -26076163 + GA-rich Low_complexity Low_complexity 2 52 0 4 598 310 259 11 11 chr3R 1830723 1830813 -26074240 + (CCG)n Simple_repeat Simple_repeat 3 92 0 4 599 28 0 0 0 chr3R 1835709 1835737 -26069316 + AT_rich Low_complexity Low_complexity 1 28 0 4 599 227 288 0 0 chr3R 1838546 1838626 -26066427 + (TCTG)n Simple_repeat Simple_repeat 4 83 0 4 599 21 57 0 0 chr3R 1838979 1839014 -26066039 + AT_rich Low_complexity Low_complexity 1 35 0 4 599 216 158 0 0 chr3R 1839819 1839857 -26065196 + T-rich Low_complexity Low_complexity 3 40 0 4 599 27 62 0 0 chr3R 1840554 1840602 -26064451 + AT_rich Low_complexity Low_complexity 1 48 0 4 599 3799 5 0 0 chr3R 1841738 1842155 -26062898 - TIRANT_LTR LTR Gypsy 0 417 1 4 599 68123 2 0 1 chr3R 1842155 1849745 -26055308 - TIRANT_I LTR Gypsy 0 7692 1 4 599 3799 5 0 0 chr3R 1849745 1850162 -26054891 - TIRANT_LTR LTR Gypsy 0 417 1 4 599 23 0 0 0 chr3R 1850543 1850566 -26054487 + AT_rich Low_complexity Low_complexity 1 23 0 4 599 415 233 78 85 chr3R 1851219 1851360 -26053693 - DNAREP1_DM LINE Penelope -26 568 429 4 599 26 0 0 0 chr3R 1853105 1853131 -26051922 + AT_rich Low_complexity Low_complexity 1 26 0 4 599 21 0 0 0 chr3R 1855711 1855732 -26049321 + AT_rich Low_complexity Low_complexity 1 21 0 4 599 342 182 26 23 chr3R 1857912 1858006 -26047047 - DNAREP1_DM LINE Penelope -150 444 384 4 599 27 29 0 0 chr3R 1858690 1858724 -26046329 + AT_rich Low_complexity Low_complexity 1 34 0 4 599 216 86 0 0 chr3R 1860112 1860147 -26044906 + (CCA)n Simple_repeat Simple_repeat 2 36 0 4 599 218 224 35 0 chr3R 1864323 1864381 -26040672 + (CAG)n Simple_repeat Simple_repeat 2 61 0 4 599 207 125 24 24 chr3R 1864665 1864706 -26040347 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 4 599 207 69 0 0 chr3R 1864923 1864952 -26040101 + (ACTCG)n Simple_repeat Simple_repeat 1 29 0 4 599 194 62 31 0 chr3R 1865593 1865625 -26039428 + (CAG)n Simple_repeat Simple_repeat 3 35 0 4 599 225 242 97 0 chr3R 1866492 1866554 -26038499 + DNAREP1_DM LINE Penelope 379 446 -148 4 599 224 255 0 0 chr3R 1872768 1872815 -26032238 + (ATGGTG)n Simple_repeat Simple_repeat 6 52 0 4 599 22 56 0 0 chr3R 1877050 1877086 -26027967 + AT_rich Low_complexity Low_complexity 1 36 0 4 599 30 27 0 0 chr3R 1878714 1878751 -26026302 + AT_rich Low_complexity Low_complexity 1 37 0 4 599 24 0 0 0 chr3R 1879267 1879291 -26025762 + AT_rich Low_complexity Low_complexity 1 24 0 4 599 35 41 0 0 chr3R 1883959 1884008 -26021045 + AT_rich Low_complexity Low_complexity 1 49 0 4 599 21 0 0 0 chr3R 1890474 1890495 -26014558 + AT_rich Low_complexity Low_complexity 1 21 0 4 599 21 0 0 0 chr3R 1892103 1892124 -26012929 + AT_rich Low_complexity Low_complexity 1 21 0 4 599 32 67 0 0 chr3R 1893655 1893715 -26011338 + AT_rich Low_complexity Low_complexity 1 60 0 4 599 21 36 0 0 chr3R 1895533 1895561 -26009492 + AT_rich Low_complexity Low_complexity 1 28 0 4 599 27 81 0 0 chr3R 1896312 1896374 -26008679 + AT_rich Low_complexity Low_complexity 1 62 0 4 599 21 0 0 0 chr3R 1905099 1905120 -25999933 + AT_rich Low_complexity Low_complexity 1 21 0 4 599 227 204 0 0 chr3R 1906118 1906167 -25998886 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 599 21 0 0 0 chr3R 1909898 1909919 -25995134 + AT_rich Low_complexity Low_complexity 1 21 0 4 599 213 39 0 0 chr3R 1912545 1912571 -25992482 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 599 204 273 0 18 chr3R 1913385 1913441 -25991612 + (CTG)n Simple_repeat Simple_repeat 2 56 0 4 599 27 49 0 0 chr3R 1914498 1914539 -25990514 + AT_rich Low_complexity Low_complexity 1 41 0 4 599 282 29 0 0 chr3R 1916651 1916686 -25988367 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 599 22 0 0 0 chr3R 1917156 1917178 -25987875 + AT_rich Low_complexity Low_complexity 1 22 0 4 599 24 32 0 0 chr3R 1917852 1917883 -25987170 + AT_rich Low_complexity Low_complexity 1 31 0 4 599 21 57 0 0 chr3R 1918760 1918795 -25986258 + AT_rich Low_complexity Low_complexity 1 35 0 4 599 292 185 32 21 chr3R 1919176 1919270 -25985783 + (TTG)n Simple_repeat Simple_repeat 3 97 0 4 599 21 0 0 0 chr3R 1922611 1922632 -25982421 + AT_rich Low_complexity Low_complexity 1 21 0 4 599 198 103 0 0 chr3R 1923156 1923185 -25981868 + (CATA)n Simple_repeat Simple_repeat 3 31 0 4 599 186 43 0 0 chr3R 1926012 1926035 -25979018 + (CGAAT)n Simple_repeat Simple_repeat 3 25 0 4 599 180 77 0 0 chr3R 1932096 1932122 -25972931 + (TGG)n Simple_repeat Simple_repeat 2 27 0 4 599 26 0 0 0 chr3R 1932470 1932496 -25972557 + AT_rich Low_complexity Low_complexity 1 26 0 4 599 226 316 0 0 chr3R 1934709 1934785 -25970268 - DNAREP1_DM LINE Penelope -151 443 368 4 599 27 49 0 0 chr3R 1939030 1939071 -25965982 + AT_rich Low_complexity Low_complexity 1 41 0 4 599 24 85 0 0 chr3R 1939454 1939513 -25965540 + AT_rich Low_complexity Low_complexity 1 59 0 4 599 23 33 0 0 chr3R 1941483 1941513 -25963540 + AT_rich Low_complexity Low_complexity 1 30 0 4 599 198 103 0 0 chr3R 1942741 1942770 -25962283 + (TCCG)n Simple_repeat Simple_repeat 3 31 0 4 599 21 36 0 0 chr3R 1943007 1943035 -25962018 + AT_rich Low_complexity Low_complexity 1 28 0 4 599 28 29 0 0 chr3R 1944755 1944790 -25960263 + AT_rich Low_complexity Low_complexity 1 35 0 4 599 234 0 0 0 chr3R 1944804 1944830 -25960223 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4 599 1118 22 0 0 chr3R 1946936 1947071 -25957982 + BS LINE Jockey 4992 5126 0 4 599 22 0 0 0 chr3R 1947071 1947093 -25957960 + AT_rich Low_complexity Low_complexity 1 22 0 4 599 22 0 0 0 chr3R 1947297 1947319 -25957734 + AT_rich Low_complexity Low_complexity 1 22 0 4 599 34 0 0 0 chr3R 1952037 1952071 -25952982 + AT_rich Low_complexity Low_complexity 1 34 0 4 599 245 212 30 0 chr3R 1954007 1954073 -25950980 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 599 25 0 0 0 chr3R 1956229 1956254 -25948799 + AT_rich Low_complexity Low_complexity 1 25 0 4 599 185 108 0 26 chr3R 1959037 1959075 -25945978 + (CAG)n Simple_repeat Simple_repeat 3 39 0 4 599 431 109 0 0 chr3R 1962043 1962107 -25942946 - DNAREP1_DM LINE Penelope -26 568 505 4 599 210 91 0 0 chr3R 1962107 1962140 -25942913 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 599 299 81 0 0 chr3R 1962145 1962182 -25942871 - DNAREP1_DM LINE Penelope -557 37 1 4 599 297 109 0 0 chr3R 1965332 1965378 -25939675 + (CTG)n Simple_repeat Simple_repeat 2 47 0 4 599 27 29 0 0 chr3R 1965656 1965690 -25939363 + AT_rich Low_complexity Low_complexity 1 34 0 4 74 227 254 0 0 chr3R 1966043 1966098 -25938955 + DNAREP1_DM LINE Penelope 1 55 -539 4 600 28 71 0 0 chr3R 1967244 1967300 -25937753 + AT_rich Low_complexity Low_complexity 1 56 0 4 600 299 96 0 19 chr3R 1969564 1969617 -25935436 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 600 204 273 15 0 chr3R 1978997 1979063 -25925990 + (CAG)n Simple_repeat Simple_repeat 1 67 0 4 600 22 35 0 0 chr3R 1981326 1981355 -25923698 + AT_rich Low_complexity Low_complexity 1 29 0 4 600 249 33 0 0 chr3R 1983009 1983039 -25922014 + (TC)n Simple_repeat Simple_repeat 2 31 0 4 600 27 29 0 0 chr3R 1983812 1983846 -25921207 + AT_rich Low_complexity Low_complexity 1 34 0 4 600 3786 7 0 0 chr3R 1984285 1984702 -25920351 + TIRANT_LTR LTR Gypsy 1 417 0 4 600 71179 0 0 0 chr3R 1984702 1992394 -25912659 + TIRANT_I LTR Gypsy 1 7692 0 4 600 3786 7 0 0 chr3R 1992394 1992811 -25912242 + TIRANT_LTR LTR Gypsy 1 417 0 4 600 208 80 98 20 chr3R 1996204 1996255 -25908798 + (TTTAA)n Simple_repeat Simple_repeat 3 57 0 4 600 21 0 0 0 chr3R 1997504 1997525 -25907528 + AT_rich Low_complexity Low_complexity 1 21 0 4 600 23 68 0 0 chr3R 1997629 1997673 -25907380 + AT_rich Low_complexity Low_complexity 1 44 0 4 600 1059 146 33 102 chr3R 2001037 2001281 -25903772 + DMLTR5 LTR Gypsy 40 266 0 4 600 2232 90 39 34 chr3R 2001280 2001637 -25903416 + HMSBEAGLE_I LTR Gypsy 1 359 -6170 4 600 33 43 0 0 chr3R 2001652 2001699 -25903354 + AT_rich Low_complexity Low_complexity 1 47 0 4 600 30936 139 2 8 chr3R 2001862 2006529 -25898524 + HMSBEAGLE_I LTR Gypsy 1212 5850 -679 4 600 1341 228 53 108 chr3R 2006878 2007351 -25897702 + HMSBEAGLE_I LTR Gypsy 5810 6256 -273 4 600 326 171 27 67 chr3R 2007532 2007607 -25897446 + HMSBEAGLE_I LTR Gypsy 6334 6405 -124 4 600 858 135 0 0 chr3R 2007706 2007832 -25897221 + HMSBEAGLE_I LTR Gypsy 6404 6529 0 4 600 1059 146 33 102 chr3R 2007920 2008164 -25896889 + DMLTR5 LTR Gypsy 40 266 0 4 600 23 33 0 0 chr3R 2011683 2011713 -25893340 + AT_rich Low_complexity Low_complexity 1 30 0 4 600 225 0 0 0 chr3R 2013916 2013941 -25891112 + (T)n Simple_repeat Simple_repeat 1 25 0 4 600 25 0 0 0 chr3R 2020146 2020171 -25884882 + AT_rich Low_complexity Low_complexity 1 25 0 4 600 198 0 0 0 chr3R 2020305 2020327 -25884726 + (TAA)n Simple_repeat Simple_repeat 1 22 0 4 600 224 241 0 0 chr3R 2023544 2023598 -25881455 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 600 22 35 0 0 chr3R 2030895 2030924 -25874129 + AT_rich Low_complexity Low_complexity 1 29 0 4 600 1070 23 0 0 chr3R 2032063 2032193 -25872860 + BS LINE Jockey 4997 5126 0 4 600 216 0 0 0 chr3R 2032193 2032217 -25872836 + (A)n Simple_repeat Simple_repeat 1 24 0 4 600 23 54 0 0 chr3R 2032430 2032467 -25872586 + AT_rich Low_complexity Low_complexity 1 37 0 4 600 27 29 0 0 chr3R 2038348 2038382 -25866671 + AT_rich Low_complexity Low_complexity 1 34 0 4 600 27 0 0 0 chr3R 2043926 2043953 -25861100 + AT_rich Low_complexity Low_complexity 1 27 0 4 600 314 163 10 0 chr3R 2044752 2044850 -25860203 + (TA)n Simple_repeat Simple_repeat 1 99 0 4 600 213 294 12 12 chr3R 2046157 2046243 -25858810 + (CCG)n Simple_repeat Simple_repeat 2 87 0 4 600 218 208 21 0 chr3R 2047566 2047614 -25857439 + (CAG)n Simple_repeat Simple_repeat 2 50 0 4 600 31 68 0 0 chr3R 2047935 2047994 -25857059 + AT_rich Low_complexity Low_complexity 1 59 0 4 600 22 0 0 0 chr3R 2048665 2048687 -25856366 + AT_rich Low_complexity Low_complexity 1 22 0 4 600 42 20 0 0 chr3R 2050088 2050137 -25854916 + AT_rich Low_complexity Low_complexity 1 49 0 4 600 23 54 0 0 chr3R 2051058 2051095 -25853958 + AT_rich Low_complexity Low_complexity 1 37 0 4 600 21 0 0 0 chr3R 2054515 2054536 -25850517 + AT_rich Low_complexity Low_complexity 1 21 0 4 600 21 0 0 0 chr3R 2055006 2055027 -25850026 + AT_rich Low_complexity Low_complexity 1 21 0 4 600 206 158 0 26 chr3R 2059943 2059982 -25845071 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 600 42 0 0 0 chr3R 2062102 2062144 -25842909 + AT_rich Low_complexity Low_complexity 1 42 0 4 600 188 125 0 48 chr3R 2062476 2062518 -25842535 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 4 600 237 33 0 0 chr3R 2063093 2063123 -25841930 + (AACTG)n Simple_repeat Simple_repeat 1 30 0 4 600 2361 59 75 0 chr3R 2064003 2064309 -25840744 + BS2 LINE Jockey 4031 4359 -362 4 600 1865 79 16 0 chr3R 2064316 2064570 -25840483 + BS2 LINE Jockey 4464 4721 0 4 600 21 36 0 0 chr3R 2065175 2065203 -25839850 + AT_rich Low_complexity Low_complexity 1 28 0 4 600 21 0 0 0 chr3R 2065290 2065311 -25839742 + AT_rich Low_complexity Low_complexity 1 21 0 4 600 35 63 0 0 chr3R 2067204 2067267 -25837786 + AT_rich Low_complexity Low_complexity 1 63 0 4 600 1545 19 3 0 chr3R 2067959 2068318 -25836735 + (TTA)n Simple_repeat Simple_repeat 1 360 0 4 600 23 0 0 0 chr3R 2071456 2071479 -25833574 + AT_rich Low_complexity Low_complexity 1 23 0 4 600 21 0 0 0 chr3R 2072121 2072142 -25832911 + AT_rich Low_complexity Low_complexity 1 21 0 4 600 21 89 0 0 chr3R 2072694 2072750 -25832303 + AT_rich Low_complexity Low_complexity 1 56 0 4 600 28 86 0 0 chr3R 2074043 2074113 -25830940 + AT_rich Low_complexity Low_complexity 1 70 0 4 600 39 0 0 0 chr3R 2075918 2075957 -25829096 + AT_rich Low_complexity Low_complexity 1 39 0 4 600 180 111 0 0 chr3R 2076259 2076286 -25828767 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 4 600 219 114 45 0 chr3R 2076517 2076561 -25828492 + (TCTA)n Simple_repeat Simple_repeat 2 47 0 4 600 27 0 0 0 chr3R 2076891 2076918 -25828135 + AT_rich Low_complexity Low_complexity 1 27 0 4 600 207 167 0 0 chr3R 2077677 2077719 -25827334 + A-rich Low_complexity Low_complexity 1 42 0 4 600 1102 29 0 0 chr3R 2079842 2079982 -25825071 + S_DM DNA Tc1 1597 1736 0 4 600 422 168 218 0 chr3R 2079982 2080081 -25824972 - DNAREP1_DM LINE Penelope -108 486 366 4 600 21 36 0 0 chr3R 2081723 2081751 -25823302 + AT_rich Low_complexity Low_complexity 1 28 0 4 600 27 49 0 0 chr3R 2083744 2083785 -25821268 + AT_rich Low_complexity Low_complexity 1 41 0 4 600 25 0 0 0 chr3R 2083892 2083917 -25821136 + AT_rich Low_complexity Low_complexity 1 25 0 4 600 189 74 0 0 chr3R 2087681 2087708 -25817345 + (CTTAA)n Simple_repeat Simple_repeat 4 30 0 4 600 192 40 0 0 chr3R 2088142 2088167 -25816886 + (T)n Simple_repeat Simple_repeat 1 25 0 4 600 21 36 0 0 chr3R 2090212 2090240 -25814813 + AT_rich Low_complexity Low_complexity 1 28 0 4 600 29 47 0 0 chr3R 2090474 2090517 -25814536 + AT_rich Low_complexity Low_complexity 1 43 0 4 600 24 0 0 0 chr3R 2091251 2091275 -25813778 + AT_rich Low_complexity Low_complexity 1 24 0 4 600 387 195 13 0 chr3R 2091405 2091482 -25813571 + DNAREP1_DM LINE Penelope 517 594 0 4 600 213 202 0 80 chr3R 2092480 2092593 -25812460 + GA-rich Low_complexity Low_complexity 2 105 0 4 600 291 107 70 18 chr3R 2093228 2093285 -25811768 + DNAREP1_DM LINE Penelope 248 307 -287 4 600 45 34 0 0 chr3R 2095532 2095591 -25809462 + AT_rich Low_complexity Low_complexity 1 59 0 4 601 21 0 0 0 chr3R 2101388 2101409 -25803644 + AT_rich Low_complexity Low_complexity 1 21 0 4 601 208 146 36 18 chr3R 2103810 2103866 -25801187 + (TTATA)n Simple_repeat Simple_repeat 5 61 0 4 601 23 0 0 0 chr3R 2103897 2103920 -25801133 + AT_rich Low_complexity Low_complexity 1 23 0 4 601 201 39 0 0 chr3R 2104194 2104220 -25800833 + (GAAA)n Simple_repeat Simple_repeat 4 29 0 4 601 22 35 0 0 chr3R 2105954 2105983 -25799070 + AT_rich Low_complexity Low_complexity 1 29 0 4 601 201 254 0 0 chr3R 2107124 2107183 -25797870 + (ATG)n Simple_repeat Simple_repeat 2 60 0 4 601 24 32 0 0 chr3R 2108091 2108122 -25796931 + AT_rich Low_complexity Low_complexity 1 31 0 4 601 1160 125 21 10 chr3R 2109284 2109491 -25795562 - BS2 LINE Jockey 0 4721 4534 4 601 23 0 0 0 chr3R 2109583 2109606 -25795447 + AT_rich Low_complexity Low_complexity 1 23 0 4 601 26 50 0 0 chr3R 2109747 2109787 -25795266 + AT_rich Low_complexity Low_complexity 1 40 0 4 601 26 30 0 0 chr3R 2110176 2110209 -25794844 + AT_rich Low_complexity Low_complexity 1 33 0 4 601 201 354 0 0 chr3R 2110516 2110612 -25794441 + (CCG)n Simple_repeat Simple_repeat 2 97 0 4 601 322 273 0 0 chr3R 2110667 2110744 -25794309 + (CCG)n Simple_repeat Simple_repeat 2 78 0 4 601 21 71 0 0 chr3R 2111270 2111312 -25793741 + AT_rich Low_complexity Low_complexity 1 42 0 4 601 32 75 0 0 chr3R 2115734 2115801 -25789252 + AT_rich Low_complexity Low_complexity 1 67 0 4 601 282 238 0 0 chr3R 2119347 2119410 -25785643 + DNAREP1_DM LINE Penelope 381 443 -151 4 601 201 39 0 0 chr3R 2120855 2120881 -25784172 + (A)n Simple_repeat Simple_repeat 1 26 0 4 601 22 35 0 0 chr3R 2121501 2121530 -25783523 + AT_rich Low_complexity Low_complexity 1 29 0 4 601 23 33 0 0 chr3R 2130130 2130160 -25774893 + AT_rich Low_complexity Low_complexity 1 30 0 4 601 29 47 0 0 chr3R 2132107 2132150 -25772903 + AT_rich Low_complexity Low_complexity 1 43 0 4 601 255 341 0 0 chr3R 2133094 2133258 -25771795 + (CAA)n Simple_repeat Simple_repeat 1 164 0 4 601 372 326 0 0 chr3R 2133357 2133532 -25771521 + (CAA)n Simple_repeat Simple_repeat 3 177 0 4 601 355 316 0 0 chr3R 2133543 2133711 -25771342 + (CAA)n Simple_repeat Simple_repeat 3 170 0 4 601 400 305 0 0 chr3R 2133741 2133915 -25771138 + (CAA)n Simple_repeat Simple_repeat 3 176 0 4 601 267 316 0 0 chr3R 2133951 2134068 -25770985 + (CAA)n Simple_repeat Simple_repeat 3 119 0 4 601 431 307 0 0 chr3R 2134098 2134274 -25770779 + (CAA)n Simple_repeat Simple_repeat 3 178 0 4 601 427 301 0 0 chr3R 2134402 2134578 -25770475 + (CAA)n Simple_repeat Simple_repeat 1 176 0 4 601 27 81 0 0 chr3R 2134873 2134935 -25770118 + AT_rich Low_complexity Low_complexity 1 62 0 4 601 22 0 0 0 chr3R 2136609 2136631 -25768422 + AT_rich Low_complexity Low_complexity 1 22 0 4 601 183 42 0 0 chr3R 2139728 2139752 -25765301 + (TAA)n Simple_repeat Simple_repeat 1 24 0 4 601 21 36 0 0 chr3R 2147154 2147182 -25757871 + AT_rich Low_complexity Low_complexity 1 28 0 4 601 207 167 0 0 chr3R 2147452 2147494 -25757559 + (CCCA)n Simple_repeat Simple_repeat 4 45 0 4 601 23 0 0 0 chr3R 2148010 2148033 -25757020 + AT_rich Low_complexity Low_complexity 1 23 0 4 601 23 0 0 0 chr3R 2149297 2149320 -25755733 + AT_rich Low_complexity Low_complexity 1 23 0 4 601 183 129 0 0 chr3R 2150537 2150568 -25754485 + (GAGTG)n Simple_repeat Simple_repeat 2 32 0 4 601 225 0 0 0 chr3R 2152668 2152693 -25752360 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 4 601 24 32 0 0 chr3R 2153262 2153293 -25751760 + AT_rich Low_complexity Low_complexity 1 31 0 4 601 27 0 0 0 chr3R 2154870 2154897 -25750156 + AT_rich Low_complexity Low_complexity 1 27 0 4 601 194 0 0 37 chr3R 2155305 2155332 -25749721 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 4 601 564 1 133 2 chr3R 2159520 2160496 -25744557 + (TAAA)n Simple_repeat Simple_repeat 1 1103 0 4 601 34 0 0 0 chr3R 2161442 2161476 -25743577 + AT_rich Low_complexity Low_complexity 1 34 0 4 601 23 33 0 0 chr3R 2162814 2162844 -25742209 + AT_rich Low_complexity Low_complexity 1 30 0 4 601 21 0 0 0 chr3R 2163268 2163289 -25741764 + AT_rich Low_complexity Low_complexity 1 21 0 4 601 362 100 17 0 chr3R 2164171 2164231 -25740822 + (CAT)n Simple_repeat Simple_repeat 1 61 0 4 601 34 0 0 0 chr3R 2167094 2167128 -25737925 + AT_rich Low_complexity Low_complexity 1 34 0 4 601 28 48 0 0 chr3R 2167174 2167216 -25737837 + AT_rich Low_complexity Low_complexity 1 42 0 4 601 490 108 314 0 chr3R 2167218 2167320 -25737733 - DMRP1 Unknown Unknown -212 134 1 4 601 33 43 0 0 chr3R 2169483 2169530 -25735523 + AT_rich Low_complexity Low_complexity 1 47 0 4 601 25 65 0 0 chr3R 2169577 2169623 -25735430 + AT_rich Low_complexity Low_complexity 1 46 0 4 601 22 35 0 0 chr3R 2171734 2171763 -25733290 + AT_rich Low_complexity Low_complexity 1 29 0 4 601 212 264 19 0 chr3R 2178430 2178483 -25726570 + (TATG)n Simple_repeat Simple_repeat 3 56 0 4 601 185 65 32 0 chr3R 2179954 2179985 -25725068 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 601 357 117 0 0 chr3R 2185245 2185305 -25719748 + (CAA)n Simple_repeat Simple_repeat 2 61 0 4 601 22 0 0 0 chr3R 2185351 2185373 -25719680 + AT_rich Low_complexity Low_complexity 1 22 0 4 601 34 24 0 0 chr3R 2185936 2185977 -25719076 + AT_rich Low_complexity Low_complexity 1 41 0 4 601 22 35 0 0 chr3R 2186713 2186742 -25718311 + AT_rich Low_complexity Low_complexity 1 29 0 4 601 25 51 0 0 chr3R 2188064 2188103 -25716950 + AT_rich Low_complexity Low_complexity 1 39 0 4 601 306 129 210 0 chr3R 2189389 2189451 -25715602 + DNAREP1_DM LINE Penelope 383 457 -137 4 601 227 98 293 0 chr3R 2191150 2191191 -25713862 - R1_DM LINE R1 -11 5345 5293 4 601 602 185 60 33 chr3R 2191243 2191394 -25713659 - R1_DM LINE R1 -245 5111 4957 4 601 567 101 152 0 chr3R 2191523 2191622 -25713431 + DNAREP1_DM LINE Penelope 458 571 -23 4 601 224 306 0 0 chr3R 2192483 2192545 -25712508 + CT-rich Low_complexity Low_complexity 1 62 0 4 601 239 167 45 0 chr3R 2193435 2193501 -25711552 - ROO_I LTR Pao -7523 733 665 4 601 214 269 13 0 chr3R 2194356 2194434 -25710619 + (TAAA)n Simple_repeat Simple_repeat 3 81 0 4 601 27 0 0 0 chr3R 2197829 2197856 -25707197 + AT_rich Low_complexity Low_complexity 1 27 0 4 601 25 0 0 0 chr3R 2201216 2201241 -25703812 + AT_rich Low_complexity Low_complexity 1 25 0 4 601 23 33 0 0 chr3R 2201348 2201378 -25703675 + AT_rich Low_complexity Low_complexity 1 30 0 4 601 25 51 0 0 chr3R 2201420 2201459 -25703594 + AT_rich Low_complexity Low_complexity 1 39 0 4 601 22 0 0 0 chr3R 2201954 2201976 -25703077 + AT_rich Low_complexity Low_complexity 1 22 0 4 601 257 283 0 0 chr3R 2202462 2202575 -25702478 + (CAG)n Simple_repeat Simple_repeat 3 115 0 4 601 21 0 0 0 chr3R 2203915 2203936 -25701117 + AT_rich Low_complexity Low_complexity 1 21 0 4 601 201 385 0 0 chr3R 2207121 2207290 -25697763 + GA-rich Low_complexity Low_complexity 2 170 0 4 601 183 162 0 0 chr3R 2207731 2207768 -25697285 + GA-rich Low_complexity Low_complexity 5 41 0 4 601 23 0 0 0 chr3R 2208540 2208563 -25696490 + AT_rich Low_complexity Low_complexity 1 23 0 4 601 218 183 0 48 chr3R 2209327 2209390 -25695663 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 601 29 0 0 0 chr3R 2210610 2210639 -25694414 + AT_rich Low_complexity Low_complexity 1 29 0 4 601 21 36 0 0 chr3R 2212426 2212454 -25692599 + AT_rich Low_complexity Low_complexity 1 28 0 4 601 24 0 0 0 chr3R 2213193 2213217 -25691836 + AT_rich Low_complexity Low_complexity 1 24 0 4 601 21 36 0 0 chr3R 2213511 2213539 -25691514 + AT_rich Low_complexity Low_complexity 1 28 0 4 601 301 205 38 25 chr3R 2214181 2214261 -25690792 + DNAREP1_DM LINE Penelope 32 112 -482 4 601 27 62 0 0 chr3R 2214895 2214943 -25690110 + AT_rich Low_complexity Low_complexity 1 48 0 4 601 191 61 0 29 chr3R 2215411 2215445 -25689608 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 4 601 21 0 0 0 chr3R 2216832 2216853 -25688200 + AT_rich Low_complexity Low_complexity 1 21 0 4 601 300 53 0 0 chr3R 2217238 2217276 -25687777 + (CCA)n Simple_repeat Simple_repeat 2 39 0 4 601 367 220 78 20 chr3R 2223494 2223596 -25681457 + DNAREP1_DM LINE Penelope 1 108 -486 4 601 25 31 0 0 chr3R 2225683 2225715 -25679338 + AT_rich Low_complexity Low_complexity 1 32 0 4 601 25 51 0 0 chr3R 2225948 2225987 -25679066 + AT_rich Low_complexity Low_complexity 1 39 0 4 601 21 0 0 0 chr3R 2227524 2227545 -25677508 + AT_rich Low_complexity Low_complexity 1 21 0 4 602 201 159 0 0 chr3R 2228745 2228789 -25676264 + CT-rich Low_complexity Low_complexity 2 45 0 4 602 21 0 0 0 chr3R 2230002 2230023 -25675030 + AT_rich Low_complexity Low_complexity 1 21 0 4 602 25 51 0 0 chr3R 2231739 2231778 -25673275 + AT_rich Low_complexity Low_complexity 1 39 0 4 602 219 286 0 13 chr3R 2236511 2236589 -25668464 + GA-rich Low_complexity Low_complexity 2 78 0 4 602 200 139 28 0 chr3R 2237644 2237680 -25667373 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 602 24 0 0 0 chr3R 2238043 2238067 -25666986 + AT_rich Low_complexity Low_complexity 1 24 0 4 602 25 31 0 0 chr3R 2238439 2238471 -25666582 + AT_rich Low_complexity Low_complexity 1 32 0 4 602 564 42 0 0 chr3R 2239811 2239882 -25665171 + (CA)n Simple_repeat Simple_repeat 2 72 0 4 602 738 34 0 0 chr3R 2242446 2242535 -25662518 + (CA)n Simple_repeat Simple_repeat 1 89 0 4 602 20643 3 0 0 chr3R 2242535 2244781 -25660272 + DMRT1B LINE R1 2938 5183 0 4 602 243 0 0 0 chr3R 2244791 2244818 -25660235 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 602 201 300 0 0 chr3R 2245753 2245813 -25659240 + CT-rich Low_complexity Low_complexity 2 61 0 4 602 22 0 0 0 chr3R 2246883 2246905 -25658148 + GC_rich Low_complexity Low_complexity 1 22 0 4 602 198 118 0 0 chr3R 2247365 2247399 -25657654 + (CAACT)n Simple_repeat Simple_repeat 4 37 0 4 602 21 0 0 0 chr3R 2248830 2248851 -25656202 + AT_rich Low_complexity Low_complexity 1 21 0 4 602 21 71 0 0 chr3R 2250599 2250641 -25654412 + AT_rich Low_complexity Low_complexity 1 42 0 4 602 21 71 0 0 chr3R 2252245 2252287 -25652766 + AT_rich Low_complexity Low_complexity 1 42 0 4 602 186 71 0 0 chr3R 2254430 2254458 -25650595 + (A)n Simple_repeat Simple_repeat 1 28 0 4 602 216 130 0 0 chr3R 2255564 2255610 -25649443 + (T)n Simple_repeat Simple_repeat 1 46 0 4 602 201 163 0 0 chr3R 2256121 2256170 -25648883 + (TGGG)n Simple_repeat Simple_repeat 3 51 0 4 602 29 60 0 0 chr3R 2256928 2256978 -25648075 + AT_rich Low_complexity Low_complexity 1 50 0 4 602 194 106 90 15 chr3R 2257334 2257401 -25647652 + (TATAA)n Simple_repeat Simple_repeat 5 76 0 4 602 225 227 68 68 chr3R 2258805 2258923 -25646130 + Gypsy6_I LTR Gypsy 208 325 -6687 4 602 23 33 0 0 chr3R 2259878 2259908 -25645145 + AT_rich Low_complexity Low_complexity 1 30 0 4 602 203 303 0 62 chr3R 2261170 2261251 -25643802 + (CATA)n Simple_repeat Simple_repeat 2 77 0 4 602 268 279 13 13 chr3R 2267869 2267974 -25637079 + (CAG)n Simple_repeat Simple_repeat 1 105 0 4 602 267 93 0 0 chr3R 2267974 2268017 -25637036 + (CCA)n Simple_repeat Simple_repeat 2 44 0 4 602 268 279 13 13 chr3R 2268017 2268060 -25636993 + (CAG)n Simple_repeat Simple_repeat 1 43 0 4 602 293 274 0 0 chr3R 2269841 2269936 -25635117 + (CAG)n Simple_repeat Simple_repeat 3 97 0 4 602 208 255 0 0 chr3R 2270367 2270418 -25634635 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 4 602 204 195 25 49 chr3R 2270533 2270614 -25634439 + T-rich Low_complexity Low_complexity 3 81 0 4 602 330 80 0 0 chr3R 2271433 2271483 -25633570 + (AATTG)n Simple_repeat Simple_repeat 5 54 0 4 602 33 25 0 0 chr3R 2271718 2271758 -25633295 + AT_rich Low_complexity Low_complexity 1 40 0 4 602 180 182 0 0 chr3R 2272525 2272569 -25632484 + (CAG)n Simple_repeat Simple_repeat 1 44 0 4 602 22 35 0 0 chr3R 2274066 2274095 -25630958 + AT_rich Low_complexity Low_complexity 1 29 0 4 602 26 0 0 0 chr3R 2274338 2274364 -25630689 + AT_rich Low_complexity Low_complexity 1 26 0 4 602 21 57 0 0 chr3R 2274786 2274821 -25630232 + AT_rich Low_complexity Low_complexity 1 35 0 4 602 23 105 0 0 chr3R 2274933 2275019 -25630034 + AT_rich Low_complexity Low_complexity 1 86 0 4 602 21 0 0 0 chr3R 2282518 2282539 -25622514 + AT_rich Low_complexity Low_complexity 1 21 0 4 602 28 79 0 0 chr3R 2282603 2282666 -25622387 + AT_rich Low_complexity Low_complexity 1 63 0 4 602 203 0 37 0 chr3R 2284616 2284643 -25620410 + (CAATA)n Simple_repeat Simple_repeat 2 29 0 4 602 1946 112 26 12 chr3R 2286661 2287004 -25618049 - S_DM DNA Tc1 0 1736 1389 4 602 296 157 229 0 chr3R 2287474 2287544 -25617509 + DNAREP1_DM LINE Penelope 437 522 -72 4 602 32 57 0 0 chr3R 2287725 2287778 -25617275 + AT_rich Low_complexity Low_complexity 1 53 0 4 602 24 32 0 0 chr3R 2290784 2290815 -25614238 + AT_rich Low_complexity Low_complexity 1 31 0 4 602 23 33 0 0 chr3R 2291723 2291753 -25613300 + AT_rich Low_complexity Low_complexity 1 30 0 4 602 282 179 0 0 chr3R 2292559 2292615 -25612438 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 602 21 89 0 0 chr3R 2293149 2293205 -25611848 + AT_rich Low_complexity Low_complexity 1 56 0 4 602 224 131 0 21 chr3R 2293445 2293492 -25611561 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 602 27 0 0 0 chr3R 2296695 2296722 -25608331 + AT_rich Low_complexity Low_complexity 1 27 0 4 602 29 0 0 0 chr3R 2297605 2297634 -25607419 + AT_rich Low_complexity Low_complexity 1 29 0 4 602 198 143 0 0 chr3R 2298409 2298444 -25606609 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 602 25 0 0 0 chr3R 2298454 2298479 -25606574 + AT_rich Low_complexity Low_complexity 1 25 0 4 602 26 30 0 0 chr3R 2307997 2308030 -25597023 + AT_rich Low_complexity Low_complexity 1 33 0 4 602 216 198 0 69 chr3R 2310334 2310421 -25594632 + T-rich Low_complexity Low_complexity 3 83 0 4 602 31 26 0 0 chr3R 2312110 2312148 -25592905 + AT_rich Low_complexity Low_complexity 1 38 0 4 602 21 71 0 0 chr3R 2313596 2313638 -25591415 + AT_rich Low_complexity Low_complexity 1 42 0 4 602 23 68 0 0 chr3R 2313673 2313717 -25591336 + AT_rich Low_complexity Low_complexity 1 44 0 4 602 23 0 0 0 chr3R 2313732 2313755 -25591298 + AT_rich Low_complexity Low_complexity 1 23 0 4 602 25 90 0 0 chr3R 2313953 2314020 -25591033 + AT_rich Low_complexity Low_complexity 1 67 0 4 602 24 0 0 0 chr3R 2314996 2315020 -25590033 + AT_rich Low_complexity Low_complexity 1 24 0 4 602 23 0 0 0 chr3R 2315033 2315056 -25589997 + AT_rich Low_complexity Low_complexity 1 23 0 4 602 24 0 0 0 chr3R 2318182 2318206 -25586847 + AT_rich Low_complexity Low_complexity 1 24 0 4 602 303 246 208 24 chr3R 2321955 2322080 -25582973 - DNAREP1_DM LINE Penelope -127 467 320 4 602 228 111 0 0 chr3R 2332264 2332300 -25572753 + (TTCTG)n Simple_repeat Simple_repeat 2 37 0 4 602 201 39 0 0 chr3R 2332524 2332550 -25572503 + (TCC)n Simple_repeat Simple_repeat 1 26 0 4 602 28 71 0 0 chr3R 2333594 2333650 -25571403 + AT_rich Low_complexity Low_complexity 1 56 0 4 602 46690 5 0 1 chr3R 2335802 2340819 -25564234 + LINEJ1_DM LINE Jockey 6 5020 0 4 602 44 46 0 0 chr3R 2347734 2347799 -25557254 + AT_rich Low_complexity Low_complexity 1 65 0 4 602 189 0 0 0 chr3R 2349775 2349796 -25555257 + (CTG)n Simple_repeat Simple_repeat 3 23 0 4 602 21 0 0 0 chr3R 2350775 2350796 -25554257 + AT_rich Low_complexity Low_complexity 1 21 0 4 602 270 0 0 0 chr3R 2351266 2351296 -25553757 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 602 22 0 0 0 chr3R 2354435 2354457 -25550596 + AT_rich Low_complexity Low_complexity 1 22 0 4 602 186 43 0 0 chr3R 2354786 2354809 -25550244 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 4 602 203 61 0 29 chr3R 2355988 2356022 -25549031 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 4 602 234 62 0 0 chr3R 2356608 2356640 -25548413 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 603 23 54 0 0 chr3R 2359719 2359756 -25545297 + AT_rich Low_complexity Low_complexity 1 37 0 4 603 345 167 57 45 chr3R 2360332 2360420 -25544633 - DNAREP1_DM LINE Penelope -104 490 402 4 603 357 194 0 0 chr3R 2360557 2360619 -25544434 - DNAREP1_DM LINE Penelope -528 66 5 4 603 297 0 0 0 chr3R 2361305 2361338 -25543715 + (CAGAA)n Simple_repeat Simple_repeat 3 35 0 4 603 24 0 0 0 chr3R 2365690 2365714 -25539339 + AT_rich Low_complexity Low_complexity 1 24 0 4 603 28 0 0 0 chr3R 2373022 2373050 -25532003 + AT_rich Low_complexity Low_complexity 1 28 0 4 603 286 335 6 6 chr3R 2374942 2375113 -25529940 + (CTG)n Simple_repeat Simple_repeat 3 173 0 4 603 24 0 0 0 chr3R 2380999 2381023 -25524030 + AT_rich Low_complexity Low_complexity 1 24 0 4 603 192 97 0 0 chr3R 2383134 2383165 -25521888 + (TC)n Simple_repeat Simple_repeat 1 31 0 4 603 21 36 0 0 chr3R 2384351 2384379 -25520674 + AT_rich Low_complexity Low_complexity 1 28 0 4 603 23 0 0 0 chr3R 2386065 2386088 -25518965 + AT_rich Low_complexity Low_complexity 1 23 0 4 603 243 0 0 0 chr3R 2392734 2392761 -25512292 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 603 25 0 0 0 chr3R 2395375 2395400 -25509653 + AT_rich Low_complexity Low_complexity 1 25 0 4 603 26 0 0 0 chr3R 2398007 2398033 -25507020 + AT_rich Low_complexity Low_complexity 1 26 0 4 603 26 30 0 0 chr3R 2399484 2399517 -25505536 + AT_rich Low_complexity Low_complexity 1 33 0 4 603 21 36 0 0 chr3R 2404326 2404354 -25500699 + AT_rich Low_complexity Low_complexity 1 28 0 4 603 30 27 0 0 chr3R 2410909 2410946 -25494107 + AT_rich Low_complexity Low_complexity 1 37 0 4 603 22 0 0 0 chr3R 2411947 2411969 -25493084 + AT_rich Low_complexity Low_complexity 1 22 0 4 603 21 0 0 0 chr3R 2414089 2414110 -25490943 + AT_rich Low_complexity Low_complexity 1 21 0 4 603 26 0 0 0 chr3R 2415277 2415303 -25489750 + AT_rich Low_complexity Low_complexity 1 26 0 4 603 22 35 0 0 chr3R 2418326 2418355 -25486698 + AT_rich Low_complexity Low_complexity 1 29 0 4 603 50 42 0 0 chr3R 2420045 2420116 -25484937 + AT_rich Low_complexity Low_complexity 1 71 0 4 603 198 103 0 0 chr3R 2422407 2422436 -25482617 + (TA)n Simple_repeat Simple_repeat 1 29 0 4 603 21 0 0 0 chr3R 2425628 2425649 -25479404 + AT_rich Low_complexity Low_complexity 1 21 0 4 603 21 36 0 0 chr3R 2427074 2427102 -25477951 + AT_rich Low_complexity Low_complexity 1 28 0 4 603 800 133 8 0 chr3R 2428100 2428228 -25476825 + DNAREP1_DM LINE Penelope 1 129 -465 4 603 1154 142 162 33 chr3R 2428228 2428469 -25476584 + DNAREP1_DM LINE Penelope 323 594 0 4 603 30 59 0 0 chr3R 2428806 2428857 -25476196 + AT_rich Low_complexity Low_complexity 1 51 0 4 603 23 33 0 0 chr3R 2431190 2431220 -25473833 + AT_rich Low_complexity Low_complexity 1 30 0 4 603 219 133 0 0 chr3R 2435258 2435303 -25469750 + (CTG)n Simple_repeat Simple_repeat 3 47 0 4 603 263 167 133 0 chr3R 2438228 2438288 -25466765 + DNAREP1_DM LINE Penelope 370 437 -157 4 603 192 111 0 0 chr3R 2438734 2438770 -25466283 + (TTGG)n Simple_repeat Simple_repeat 1 36 0 4 603 21 0 0 0 chr3R 2439379 2439400 -25465653 + AT_rich Low_complexity Low_complexity 1 21 0 4 603 28 0 0 0 chr3R 2441099 2441127 -25463926 + AT_rich Low_complexity Low_complexity 1 28 0 4 603 246 62 0 0 chr3R 2443067 2443099 -25461954 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 603 34 24 0 0 chr3R 2443661 2443702 -25461351 + AT_rich Low_complexity Low_complexity 1 41 0 4 603 21 0 0 0 chr3R 2443729 2443750 -25461303 + AT_rich Low_complexity Low_complexity 1 21 0 4 603 200 170 43 0 chr3R 2447055 2447102 -25457951 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 603 230 241 0 0 chr3R 2447122 2447201 -25457852 + GA-rich Low_complexity Low_complexity 1 79 0 4 603 402 85 0 0 chr3R 2447632 2447691 -25457362 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 603 192 40 0 0 chr3R 2447982 2448007 -25457046 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 603 198 208 0 0 chr3R 2449176 2449229 -25455824 + T-rich Low_complexity Low_complexity 1 53 0 4 603 21 0 0 0 chr3R 2450176 2450197 -25454856 + AT_rich Low_complexity Low_complexity 1 21 0 4 603 318 277 0 0 chr3R 2453482 2453601 -25451452 + T-rich Low_complexity Low_complexity 1 119 0 4 603 267 148 0 62 chr3R 2462046 2462111 -25442942 + ROO_I LTR Pao 656 716 -7540 4 603 272 266 13 0 chr3R 2462268 2462347 -25442706 + ROO_I LTR Pao 664 743 -7513 4 603 197 137 39 0 chr3R 2465450 2465501 -25439552 + (TGGA)n Simple_repeat Simple_repeat 3 55 0 4 603 1508 96 171 61 chr3R 2466632 2466942 -25438111 - DMRP1 Unknown Unknown -2 344 1 4 603 216 149 43 0 chr3R 2467707 2467754 -25437299 + A-rich Low_complexity Low_complexity 4 52 0 4 603 876 213 128 24 chr3R 2470284 2470534 -25434519 - DNAREP1_DM LINE Penelope -2 592 317 4 603 37 52 0 0 chr3R 2472034 2472092 -25432961 + AT_rich Low_complexity Low_complexity 1 58 0 4 603 23 0 0 0 chr3R 2472417 2472440 -25432613 + AT_rich Low_complexity Low_complexity 1 23 0 4 603 21 71 0 0 chr3R 2481724 2481766 -25423287 + AT_rich Low_complexity Low_complexity 1 42 0 4 603 21 57 0 0 chr3R 2483305 2483340 -25421713 + AT_rich Low_complexity Low_complexity 1 35 0 4 603 31 0 0 0 chr3R 2485982 2486013 -25419040 + AT_rich Low_complexity Low_complexity 1 31 0 4 603 29 28 0 0 chr3R 2486411 2486447 -25418606 + AT_rich Low_complexity Low_complexity 1 36 0 4 603 22 35 0 0 chr3R 2488087 2488116 -25416937 + AT_rich Low_complexity Low_complexity 1 29 0 4 604 36 0 0 0 chr3R 2490744 2490780 -25414273 + AT_rich Low_complexity Low_complexity 1 36 0 4 604 203 171 0 0 chr3R 2492131 2492172 -25412881 + (CAA)n Simple_repeat Simple_repeat 3 43 0 4 604 219 229 0 32 chr3R 2494287 2494350 -25410703 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 604 22 0 0 0 chr3R 2495252 2495274 -25409779 + AT_rich Low_complexity Low_complexity 1 22 0 4 604 279 200 0 0 chr3R 2498304 2498354 -25406699 - DNAREP1_DM LINE Penelope -535 59 10 4 604 222 136 0 0 chr3R 2498502 2498546 -25406507 + (TTCGG)n Simple_repeat Simple_repeat 1 44 0 4 604 23 0 0 0 chr3R 2500407 2500430 -25404623 + AT_rich Low_complexity Low_complexity 1 23 0 4 604 180 158 0 0 chr3R 2503094 2503132 -25401921 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 604 228 122 0 0 chr3R 2503734 2503775 -25401278 + (CTG)n Simple_repeat Simple_repeat 3 43 0 4 604 222 194 0 0 chr3R 2503874 2503946 -25401107 + (CTG)n Simple_repeat Simple_repeat 3 74 0 4 604 449 138 0 36 chr3R 2506511 2506594 -25398459 - DNAREP1_DM LINE Penelope 0 594 515 4 604 189 74 0 0 chr3R 2506939 2506966 -25398087 + (TA)n Simple_repeat Simple_repeat 1 27 0 4 604 22 35 0 0 chr3R 2508220 2508249 -25396804 + AT_rich Low_complexity Low_complexity 1 29 0 4 604 189 94 0 0 chr3R 2508282 2508314 -25396739 + (TTTAA)n Simple_repeat Simple_repeat 1 32 0 4 604 33 56 0 0 chr3R 2509412 2509466 -25395587 + AT_rich Low_complexity Low_complexity 1 54 0 4 604 3414 32 71 3 chr3R 2510923 2511529 -25393524 + G4_DM LINE Jockey 3180 3856 0 4 604 468 318 0 0 chr3R 2513022 2513195 -25391858 + (CCG)n Simple_repeat Simple_repeat 3 175 0 4 604 201 40 120 0 chr3R 2514576 2514626 -25390427 + (TCCG)n Simple_repeat Simple_repeat 4 59 0 4 604 29 0 0 0 chr3R 2518069 2518098 -25386955 + AT_rich Low_complexity Low_complexity 1 29 0 4 604 31 0 0 0 chr3R 2519249 2519280 -25385773 + AT_rich Low_complexity Low_complexity 1 31 0 4 604 21 71 0 0 chr3R 2519452 2519494 -25385559 + AT_rich Low_complexity Low_complexity 1 42 0 4 604 29 0 0 0 chr3R 2519630 2519659 -25385394 + AT_rich Low_complexity Low_complexity 1 29 0 4 604 22 0 0 0 chr3R 2522783 2522805 -25382248 + AT_rich Low_complexity Low_complexity 1 22 0 4 604 27 0 0 0 chr3R 2523510 2523537 -25381516 + AT_rich Low_complexity Low_complexity 1 27 0 4 604 24 0 0 0 chr3R 2523576 2523600 -25381453 + AT_rich Low_complexity Low_complexity 1 24 0 4 604 21 0 0 0 chr3R 2530597 2530618 -25374435 + AT_rich Low_complexity Low_complexity 1 21 0 4 604 207 0 0 0 chr3R 2531365 2531388 -25373665 + (CATTC)n Simple_repeat Simple_repeat 1 23 0 4 604 254 211 0 0 chr3R 2531731 2531783 -25373270 + DNAREP1_DM LINE Penelope 1 52 -542 4 604 329 169 31 0 chr3R 2531855 2531920 -25373133 + DNAREP1_DM LINE Penelope 528 594 0 4 604 22 0 0 0 chr3R 2532576 2532598 -25372455 + AT_rich Low_complexity Low_complexity 1 22 0 4 604 29 0 0 0 chr3R 2534493 2534522 -25370531 + AT_rich Low_complexity Low_complexity 1 29 0 4 604 251 203 0 0 chr3R 2535496 2535560 -25369493 + (TGG)n Simple_repeat Simple_repeat 1 64 0 4 604 303 157 0 0 chr3R 2535757 2535827 -25369226 + (CTG)n Simple_repeat Simple_repeat 2 71 0 4 604 21 82 0 0 chr3R 2536121 2536170 -25368883 + AT_rich Low_complexity Low_complexity 1 49 0 4 604 27 49 0 0 chr3R 2538290 2538331 -25366722 + AT_rich Low_complexity Low_complexity 1 41 0 4 604 186 43 0 0 chr3R 2540537 2540560 -25364493 + (CCCGAA)n Simple_repeat Simple_repeat 1 23 0 4 604 26 0 0 0 chr3R 2546043 2546069 -25358984 + AT_rich Low_complexity Low_complexity 1 26 0 4 604 21 95 0 0 chr3R 2548256 2548319 -25356734 + AT_rich Low_complexity Low_complexity 1 63 0 4 604 222 227 0 0 chr3R 2550048 2550092 -25354961 + (CTG)n Simple_repeat Simple_repeat 1 44 0 4 604 198 0 0 0 chr3R 2553763 2553785 -25351268 + (ATG)n Simple_repeat Simple_repeat 1 22 0 4 604 23 92 0 0 chr3R 2554788 2554853 -25350200 + AT_rich Low_complexity Low_complexity 1 65 0 4 604 21 0 0 0 chr3R 2557881 2557902 -25347151 + AT_rich Low_complexity Low_complexity 1 21 0 4 604 22 0 0 0 chr3R 2559165 2559187 -25345866 + AT_rich Low_complexity Low_complexity 1 22 0 4 604 21 0 0 0 chr3R 2562891 2562912 -25342141 + AT_rich Low_complexity Low_complexity 1 21 0 4 604 15921 2 0 1 chr3R 2563275 2565005 -25340048 - DOC LINE Jockey -1 4724 2997 4 604 53 40 0 0 chr3R 2566092 2566166 -25338887 + AT_rich Low_complexity Low_complexity 1 74 0 4 604 23 0 0 0 chr3R 2567655 2567678 -25337375 + AT_rich Low_complexity Low_complexity 1 23 0 4 604 24 0 0 0 chr3R 2570256 2570280 -25334773 + AT_rich Low_complexity Low_complexity 1 24 0 4 604 23 33 0 0 chr3R 2574434 2574464 -25330589 + AT_rich Low_complexity Low_complexity 1 30 0 4 604 28 29 0 0 chr3R 2574511 2574546 -25330507 + AT_rich Low_complexity Low_complexity 1 35 0 4 604 25 31 0 0 chr3R 2574563 2574595 -25330458 + AT_rich Low_complexity Low_complexity 1 32 0 4 604 21 0 0 0 chr3R 2576539 2576560 -25328493 + AT_rich Low_complexity Low_complexity 1 21 0 4 604 21 0 0 0 chr3R 2577517 2577538 -25327515 + AT_rich Low_complexity Low_complexity 1 21 0 4 604 197 83 0 27 chr3R 2577860 2577897 -25327156 + (CACAC)n Simple_repeat Simple_repeat 1 36 0 4 604 202 273 0 0 chr3R 2578328 2578372 -25326681 + CT-rich Low_complexity Low_complexity 1 44 0 4 604 295 257 9 9 chr3R 2583504 2583614 -25321439 + (CTG)n Simple_repeat Simple_repeat 1 110 0 4 604 227 282 0 0 chr3R 2584877 2584948 -25320105 + G-rich Low_complexity Low_complexity 1 71 0 4 604 24 53 0 0 chr3R 2585671 2585709 -25319344 + AT_rich Low_complexity Low_complexity 1 38 0 4 604 313 22 43 0 chr3R 2592438 2592484 -25312569 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 604 185 97 31 46 chr3R 2592490 2592555 -25312498 + (TAA)n Simple_repeat Simple_repeat 3 66 0 4 604 22 0 0 0 chr3R 2594622 2594644 -25310409 + AT_rich Low_complexity Low_complexity 1 22 0 4 604 180 97 0 0 chr3R 2595546 2595577 -25309476 + (TAA)n Simple_repeat Simple_repeat 3 33 0 4 604 31 44 0 0 chr3R 2605569 2605614 -25299439 + AT_rich Low_complexity Low_complexity 1 45 0 4 604 704 157 165 45 chr3R 2607827 2608027 -25297026 - DNAREP1_DM LINE Penelope -29 565 342 4 604 263 241 0 0 chr3R 2610230 2610288 -25294765 + DNAREP1_DM LINE Penelope 2 59 -535 4 604 31 26 0 0 chr3R 2610296 2610334 -25294719 + AT_rich Low_complexity Low_complexity 1 38 0 4 604 735 148 153 47 chr3R 2610334 2610504 -25294549 + DNAREP1_DM LINE Penelope 407 594 0 4 604 39 84 0 0 chr3R 2610545 2610640 -25294413 + AT_rich Low_complexity Low_complexity 1 95 0 4 604 29 47 0 0 chr3R 2614054 2614097 -25290956 + AT_rich Low_complexity Low_complexity 1 43 0 4 604 22 0 0 0 chr3R 2617101 2617123 -25287930 + AT_rich Low_complexity Low_complexity 1 22 0 4 604 26 20 0 58 chr3R 2617139 2617191 -25287862 + AT_rich Low_complexity Low_complexity 1 49 0 4 604 58 0 0 0 chr3R 2618940 2618998 -25286055 + AT_rich Low_complexity Low_complexity 1 58 0 4 604 22 35 0 0 chr3R 2620865 2620894 -25284159 + AT_rich Low_complexity Low_complexity 1 29 0 4 605 240 111 0 0 chr3R 2622662 2622698 -25282355 + (TC)n Simple_repeat Simple_repeat 2 37 0 4 605 270 132 0 0 chr3R 2627009 2627062 -25277991 + (CAG)n Simple_repeat Simple_repeat 2 54 0 4 605 315 280 34 8 chr3R 2627454 2627573 -25277480 + ROO_I LTR Pao 641 762 -7494 4 605 23 54 0 0 chr3R 2631071 2631108 -25273945 + AT_rich Low_complexity Low_complexity 1 37 0 4 605 22 35 0 0 chr3R 2633098 2633127 -25271926 + AT_rich Low_complexity Low_complexity 1 29 0 4 605 21 71 0 0 chr3R 2633652 2633694 -25271359 + AT_rich Low_complexity Low_complexity 1 42 0 4 605 276 120 0 0 chr3R 2636552 2636602 -25268451 + (GA)n Simple_repeat Simple_repeat 2 51 0 4 605 208 234 0 0 chr3R 2640958 2641005 -25264048 + (CACCAT)n Simple_repeat Simple_repeat 6 52 0 4 605 242 207 0 17 chr3R 2641590 2641649 -25263404 + (CCCA)n Simple_repeat Simple_repeat 2 59 0 4 605 27 0 0 0 chr3R 2642723 2642750 -25262303 + AT_rich Low_complexity Low_complexity 1 27 0 4 605 24 67 0 0 chr3R 2645190 2645235 -25259818 + AT_rich Low_complexity Low_complexity 1 45 0 4 605 26 64 0 0 chr3R 2645454 2645501 -25259552 + AT_rich Low_complexity Low_complexity 1 47 0 4 605 35 41 0 0 chr3R 2645736 2645785 -25259268 + AT_rich Low_complexity Low_complexity 1 49 0 4 605 532 269 93 16 chr3R 2646397 2646629 -25258424 + BS2 LINE Jockey 4388 4589 -132 4 605 25 51 0 0 chr3R 2646744 2646783 -25258270 + AT_rich Low_complexity Low_complexity 1 39 0 4 605 25 51 0 0 chr3R 2647589 2647628 -25257425 + AT_rich Low_complexity Low_complexity 1 39 0 4 605 532 269 93 16 chr3R 2647743 2647975 -25257078 - BS2 LINE Jockey -132 4589 4388 4 605 35 41 0 0 chr3R 2648587 2648636 -25256417 + AT_rich Low_complexity Low_complexity 1 49 0 4 605 23 0 0 0 chr3R 2651470 2651493 -25253560 + AT_rich Low_complexity Low_complexity 1 23 0 4 605 195 69 0 0 chr3R 2654318 2654347 -25250706 + (GGATG)n Simple_repeat Simple_repeat 5 33 0 4 605 198 0 0 0 chr3R 2657178 2657200 -25247853 + (A)n Simple_repeat Simple_repeat 1 22 0 4 605 27 29 0 0 chr3R 2665922 2665956 -25239097 + AT_rich Low_complexity Low_complexity 1 34 0 4 605 24 0 0 0 chr3R 2666271 2666295 -25238758 + AT_rich Low_complexity Low_complexity 1 24 0 4 605 231 146 0 0 chr3R 2667301 2667342 -25237711 + (TTG)n Simple_repeat Simple_repeat 1 41 0 4 605 244 175 0 127 chr3R 2667418 2667536 -25237517 - ROO_I LTR Pao -7513 743 641 4 605 199 29 56 28 chr3R 2670218 2670254 -25234799 + (GAGAA)n Simple_repeat Simple_repeat 4 40 0 4 605 30 59 0 0 chr3R 2673222 2673273 -25231780 + AT_rich Low_complexity Low_complexity 1 51 0 4 605 21 71 0 0 chr3R 2674850 2674892 -25230161 + AT_rich Low_complexity Low_complexity 1 42 0 4 605 48 18 0 0 chr3R 2674967 2675022 -25230031 + AT_rich Low_complexity Low_complexity 1 55 0 4 605 24 0 0 0 chr3R 2676590 2676614 -25228439 + AT_rich Low_complexity Low_complexity 1 24 0 4 605 25 31 0 0 chr3R 2676870 2676902 -25228151 + AT_rich Low_complexity Low_complexity 1 32 0 4 605 561 164 218 52 chr3R 2682472 2682646 -25222407 + DNAREP1_DM LINE Penelope 392 594 0 4 605 22 35 0 0 chr3R 2682709 2682738 -25222315 + AT_rich Low_complexity Low_complexity 1 29 0 4 605 35 78 0 0 chr3R 2684042 2684119 -25220934 + AT_rich Low_complexity Low_complexity 1 77 0 4 605 242 79 0 60 chr3R 2684122 2684189 -25220864 + (TTATA)n Simple_repeat Simple_repeat 2 64 0 4 605 35 0 0 0 chr3R 2684208 2684243 -25220810 + AT_rich Low_complexity Low_complexity 1 35 0 4 605 27 73 0 0 chr3R 2684324 2684379 -25220674 + AT_rich Low_complexity Low_complexity 1 55 0 4 605 25 95 0 0 chr3R 2684448 2684522 -25220531 + AT_rich Low_complexity Low_complexity 1 74 0 4 605 1382 0 0 13 chr3R 2686786 2686941 -25218112 + FUSHI_DM Unknown Unknown 3 155 -2 4 605 689 185 22 22 chr3R 2686965 2687103 -25217950 + FUSHI_DM Unknown Unknown 4 141 -16 4 605 246 236 0 0 chr3R 2688817 2688872 -25216181 - PENELOPE LINE Penelope -116 4045 3991 4 605 23 33 0 0 chr3R 2689220 2689250 -25215803 + AT_rich Low_complexity Low_complexity 1 30 0 4 605 670 0 0 0 chr3R 2689995 2690067 -25214986 + FTZ_DM Unknown Unknown 1 72 0 4 605 26 0 0 0 chr3R 2693005 2693031 -25212022 + AT_rich Low_complexity Low_complexity 1 26 0 4 605 384 164 0 0 chr3R 2693332 2693399 -25211654 - DNAREP1_DM LINE Penelope 0 594 528 4 605 259 206 221 0 chr3R 2693450 2693518 -25211535 - DNAREP1_DM LINE Penelope -510 84 2 4 605 23 54 0 0 chr3R 2696848 2696885 -25208168 + AT_rich Low_complexity Low_complexity 1 37 0 4 605 24 85 0 0 chr3R 2696903 2696962 -25208091 + AT_rich Low_complexity Low_complexity 1 59 0 4 605 27 29 0 0 chr3R 2701771 2701805 -25203248 + AT_rich Low_complexity Low_complexity 1 34 0 4 605 30 0 0 0 chr3R 2702530 2702560 -25202493 + AT_rich Low_complexity Low_complexity 1 30 0 4 605 225 94 0 0 chr3R 2703118 2703150 -25201903 + (A)n Simple_repeat Simple_repeat 1 32 0 4 605 23 33 0 0 chr3R 2704875 2704905 -25200148 + AT_rich Low_complexity Low_complexity 1 30 0 4 605 202 29 0 54 chr3R 2708783 2708820 -25196233 + (CAAAC)n Simple_repeat Simple_repeat 5 39 0 4 605 28 79 0 0 chr3R 2710596 2710659 -25194394 + AT_rich Low_complexity Low_complexity 1 63 0 4 605 44 63 0 0 chr3R 2714062 2714141 -25190912 + AT_rich Low_complexity Low_complexity 1 79 0 4 605 26 93 0 0 chr3R 2715050 2715125 -25189928 + AT_rich Low_complexity Low_complexity 1 75 0 4 605 213 94 0 0 chr3R 2715348 2715380 -25189673 + (CCGAA)n Simple_repeat Simple_repeat 4 35 0 4 605 189 0 0 0 chr3R 2716887 2716908 -25188145 + (G)n Simple_repeat Simple_repeat 1 21 0 4 605 28 48 0 0 chr3R 2717299 2717341 -25187712 + AT_rich Low_complexity Low_complexity 1 42 0 4 605 42 36 0 0 chr3R 2718321 2718377 -25186676 + AT_rich Low_complexity Low_complexity 1 56 0 4 605 38 51 0 0 chr3R 2718443 2718502 -25186551 + AT_rich Low_complexity Low_complexity 1 59 0 4 605 180 0 0 0 chr3R 2719796 2719816 -25185237 + (CATCG)n Simple_repeat Simple_repeat 2 21 0 4 605 24 0 0 0 chr3R 2720328 2720352 -25184701 + AT_rich Low_complexity Low_complexity 1 24 0 4 605 23 33 0 0 chr3R 2720781 2720811 -25184242 + AT_rich Low_complexity Low_complexity 1 30 0 4 605 21 0 0 0 chr3R 2721873 2721894 -25183159 + AT_rich Low_complexity Low_complexity 1 21 0 4 605 36 40 0 0 chr3R 2721970 2722020 -25183033 + AT_rich Low_complexity Low_complexity 1 50 0 4 605 21 71 0 0 chr3R 2722297 2722339 -25182714 + AT_rich Low_complexity Low_complexity 1 42 0 4 605 25 51 0 0 chr3R 2723380 2723419 -25181634 + AT_rich Low_complexity Low_complexity 1 39 0 4 605 22 0 0 0 chr3R 2723553 2723575 -25181478 + AT_rich Low_complexity Low_complexity 1 22 0 4 605 222 222 0 0 chr3R 2724408 2724462 -25180591 + T-rich Low_complexity Low_complexity 1 54 0 4 605 27 62 0 0 chr3R 2724791 2724839 -25180214 + AT_rich Low_complexity Low_complexity 1 48 0 4 605 185 154 26 0 chr3R 2725090 2725129 -25179924 + (TCCG)n Simple_repeat Simple_repeat 2 41 0 4 605 183 139 0 0 chr3R 2725836 2725872 -25179181 + (T)n Simple_repeat Simple_repeat 1 36 0 4 605 278 183 0 31 chr3R 2735209 2735305 -25169748 + (CTG)n Simple_repeat Simple_repeat 1 93 0 4 605 200 141 77 15 chr3R 2738447 2738512 -25166541 + (TTAA)n Simple_repeat Simple_repeat 1 69 0 4 605 288 53 0 0 chr3R 2741394 2741432 -25163621 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 605 189 0 0 0 chr3R 2742183 2742204 -25162849 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 4 605 26 30 0 0 chr3R 2743785 2743818 -25161235 + AT_rich Low_complexity Low_complexity 1 33 0 4 605 208 237 17 17 chr3R 2744839 2744899 -25160154 + (CAG)n Simple_repeat Simple_repeat 3 62 0 4 605 21 36 0 0 chr3R 2747188 2747216 -25157837 + AT_rich Low_complexity Low_complexity 1 28 0 4 605 26 0 0 0 chr3R 2747775 2747801 -25157252 + AT_rich Low_complexity Low_complexity 1 26 0 4 605 29 0 0 0 chr3R 2748561 2748590 -25156463 + AT_rich Low_complexity Low_complexity 1 29 0 4 605 22 56 0 0 chr3R 2748700 2748736 -25156317 + AT_rich Low_complexity Low_complexity 1 36 0 4 605 208 231 0 0 chr3R 2748891 2748943 -25156110 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 605 219 36 0 0 chr3R 2749778 2749806 -25155247 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 605 22 35 0 0 chr3R 2750319 2750348 -25154705 + AT_rich Low_complexity Low_complexity 1 29 0 4 606 238 227 0 43 chr3R 2752813 2752905 -25152148 + ROO_I LTR Pao 658 745 -7511 4 606 235 169 43 71 chr3R 2754510 2754580 -25150473 + DM1731_LTR LTR Copia 76 143 -193 4 606 212 229 12 24 chr3R 2759466 2759551 -25145502 + (TAAA)n Simple_repeat Simple_repeat 4 87 0 4 606 23 0 0 0 chr3R 2759869 2759892 -25145161 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 267 79 0 0 chr3R 2763293 2763331 -25141722 + (CCGAA)n Simple_repeat Simple_repeat 1 38 0 4 606 27 0 0 0 chr3R 2766428 2766455 -25138598 + AT_rich Low_complexity Low_complexity 1 27 0 4 606 237 65 0 0 chr3R 2768320 2768351 -25136702 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 606 32 0 0 0 chr3R 2768811 2768843 -25136210 + AT_rich Low_complexity Low_complexity 1 32 0 4 606 22 0 0 0 chr3R 2770331 2770353 -25134700 + AT_rich Low_complexity Low_complexity 1 22 0 4 606 24 53 0 0 chr3R 2775281 2775319 -25129734 + AT_rich Low_complexity Low_complexity 1 38 0 4 606 213 205 0 0 chr3R 2777781 2777820 -25127233 + (TTCGG)n Simple_repeat Simple_repeat 3 41 0 4 606 25 0 0 0 chr3R 2780564 2780589 -25124464 + AT_rich Low_complexity Low_complexity 1 25 0 4 606 207 0 0 0 chr3R 2782526 2782549 -25122504 + (TCTCCC)n Simple_repeat Simple_repeat 6 28 0 4 606 229 196 22 0 chr3R 2785732 2785778 -25119275 + (ATG)n Simple_repeat Simple_repeat 1 47 0 4 606 210 71 0 0 chr3R 2787382 2787410 -25117643 + (TCCG)n Simple_repeat Simple_repeat 2 29 0 4 606 23 0 0 0 chr3R 2791175 2791198 -25113855 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 21 71 0 0 chr3R 2791940 2791982 -25113071 + AT_rich Low_complexity Low_complexity 1 42 0 4 606 35 24 0 0 chr3R 2793071 2793113 -25111940 + AT_rich Low_complexity Low_complexity 1 42 0 4 606 24 53 0 0 chr3R 2796571 2796609 -25108444 + AT_rich Low_complexity Low_complexity 1 38 0 4 606 24 53 0 0 chr3R 2797540 2797578 -25107475 + AT_rich Low_complexity Low_complexity 1 38 0 4 606 210 212 25 12 chr3R 2801268 2801349 -25103704 + (TG)n Simple_repeat Simple_repeat 1 82 0 4 606 242 191 0 0 chr3R 2801494 2801541 -25103512 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 606 25 31 0 0 chr3R 2803611 2803643 -25101410 + AT_rich Low_complexity Low_complexity 1 32 0 4 606 183 42 0 0 chr3R 2804154 2804178 -25100875 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 606 23 33 0 0 chr3R 2806631 2806661 -25098392 + AT_rich Low_complexity Low_complexity 1 30 0 4 606 27 0 0 0 chr3R 2807450 2807477 -25097576 + AT_rich Low_complexity Low_complexity 1 27 0 4 606 229 169 0 33 chr3R 2807953 2808014 -25097039 + A-rich Low_complexity Low_complexity 3 61 0 4 606 240 122 0 0 chr3R 2808945 2808986 -25096067 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 606 23 0 0 0 chr3R 2809068 2809091 -25095962 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 24 32 0 0 chr3R 2809355 2809386 -25095667 + AT_rich Low_complexity Low_complexity 1 31 0 4 606 25 0 0 0 chr3R 2814707 2814732 -25090321 + AT_rich Low_complexity Low_complexity 1 25 0 4 606 23 0 0 0 chr3R 2815406 2815429 -25089624 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 261 0 0 0 chr3R 2815977 2816006 -25089047 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 606 23 0 0 0 chr3R 2816329 2816352 -25088701 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 216 0 0 0 chr3R 2816696 2816720 -25088333 + (TCTG)n Simple_repeat Simple_repeat 1 24 0 4 606 25 65 0 0 chr3R 2817166 2817212 -25087841 + AT_rich Low_complexity Low_complexity 1 46 0 4 606 228 86 0 0 chr3R 2818479 2818514 -25086539 + (T)n Simple_repeat Simple_repeat 1 35 0 4 606 214 147 0 0 chr3R 2820289 2820323 -25084730 + (CCGAG)n Simple_repeat Simple_repeat 5 38 0 4 606 40 0 0 0 chr3R 2821402 2821442 -25083611 + AT_rich Low_complexity Low_complexity 1 40 0 4 606 255 133 0 0 chr3R 2822892 2822937 -25082116 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 606 24 0 0 0 chr3R 2823542 2823566 -25081487 + AT_rich Low_complexity Low_complexity 1 24 0 4 606 223 314 10 0 chr3R 2824056 2824158 -25080895 + T-rich Low_complexity Low_complexity 1 103 0 4 606 273 57 0 0 chr3R 2824723 2824758 -25080295 + (CAGTT)n Simple_repeat Simple_repeat 2 36 0 4 606 763 215 66 38 chr3R 2827368 2827581 -25077472 - DNAREP1_DM LINE Penelope -6 588 370 4 606 29 0 0 0 chr3R 2829891 2829920 -25075133 + AT_rich Low_complexity Low_complexity 1 29 0 4 606 323 82 27 27 chr3R 2830985 2831060 -25073993 + (TAA)n Simple_repeat Simple_repeat 3 77 0 4 606 206 250 0 0 chr3R 2831912 2831964 -25073089 + T-rich Low_complexity Low_complexity 1 52 0 4 606 195 42 0 0 chr3R 2832884 2832908 -25072145 + (CCA)n Simple_repeat Simple_repeat 1 24 0 4 606 39 22 0 0 chr3R 2835610 2835656 -25069397 + AT_rich Low_complexity Low_complexity 1 46 0 4 606 35 0 0 0 chr3R 2835732 2835767 -25069286 + AT_rich Low_complexity Low_complexity 1 35 0 4 606 186 150 0 0 chr3R 2836973 2837013 -25068040 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 606 31 0 0 0 chr3R 2839817 2839848 -25065205 + AT_rich Low_complexity Low_complexity 1 31 0 4 606 22 0 0 0 chr3R 2839963 2839985 -25065068 + AT_rich Low_complexity Low_complexity 1 22 0 4 606 205 290 0 11 chr3R 2840056 2840150 -25064903 + (CAA)n Simple_repeat Simple_repeat 1 93 0 4 606 21 36 0 0 chr3R 2840414 2840442 -25064611 + AT_rich Low_complexity Low_complexity 1 28 0 4 606 23 0 0 0 chr3R 2841595 2841618 -25063435 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 220 196 0 0 chr3R 2844173 2844219 -25060834 + (CAG)n Simple_repeat Simple_repeat 3 48 0 4 606 326 61 0 20 chr3R 2845365 2845415 -25059638 + (CAAAC)n Simple_repeat Simple_repeat 3 51 0 4 606 228 111 0 0 chr3R 2845689 2845725 -25059328 + (GAGTG)n Simple_repeat Simple_repeat 3 38 0 4 606 25 65 0 0 chr3R 2846648 2846694 -25058359 + AT_rich Low_complexity Low_complexity 1 46 0 4 606 183 100 0 0 chr3R 2846985 2847015 -25058038 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 4 606 21 0 0 0 chr3R 2849287 2849308 -25055745 + AT_rich Low_complexity Low_complexity 1 21 0 4 606 25 31 0 0 chr3R 2854838 2854870 -25050183 + AT_rich Low_complexity Low_complexity 1 32 0 4 606 324 48 0 0 chr3R 2855154 2855196 -25049857 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 606 23 0 0 0 chr3R 2855605 2855628 -25049425 + AT_rich Low_complexity Low_complexity 1 23 0 4 606 205 186 0 0 chr3R 2856979 2857022 -25048031 + T-rich Low_complexity Low_complexity 1 43 0 4 606 237 132 0 0 chr3R 2858204 2858242 -25046811 + (TCCG)n Simple_repeat Simple_repeat 4 41 0 4 606 26 74 0 0 chr3R 2862188 2862242 -25042811 + AT_rich Low_complexity Low_complexity 1 54 0 4 606 295 79 0 0 chr3R 2864299 2864337 -25040716 - DNAREP1_DM LINE Penelope -537 57 20 4 606 1001 112 95 0 chr3R 2865752 2865921 -25039132 - DNAREP1_DM LINE Penelope -1 593 409 4 606 507 115 0 0 chr3R 2865900 2865978 -25039075 - DNAREP1_DM LINE Penelope -484 110 33 4 606 22 35 0 0 chr3R 2866048 2866077 -25038976 + AT_rich Low_complexity Low_complexity 1 29 0 4 606 21 0 0 0 chr3R 2866458 2866479 -25038574 + AT_rich Low_complexity Low_complexity 1 21 0 4 606 739 163 168 6 chr3R 2867157 2867330 -25037723 - DNAREP1_DM LINE Penelope 0 594 394 4 606 22 56 0 0 chr3R 2868882 2868918 -25036135 + AT_rich Low_complexity Low_complexity 1 36 0 4 606 25 90 0 0 chr3R 2871418 2871485 -25033568 + AT_rich Low_complexity Low_complexity 1 67 0 4 606 180 77 0 0 chr3R 2871485 2871511 -25033542 + (T)n Simple_repeat Simple_repeat 1 26 0 4 606 181 77 0 71 chr3R 2872936 2872978 -25032075 + (CATA)n Simple_repeat Simple_repeat 2 40 0 4 606 27 0 0 0 chr3R 2873981 2874008 -25031045 + AT_rich Low_complexity Low_complexity 1 27 0 4 606 34 42 0 0 chr3R 2876442 2876490 -25028563 + AT_rich Low_complexity Low_complexity 1 48 0 4 606 186 43 0 0 chr3R 2876695 2876718 -25028335 + (CAG)n Simple_repeat Simple_repeat 1 23 0 4 606 1525 107 76 22 chr3R 2877709 2877986 -25027067 - DMRP1 Unknown Unknown -6 340 49 4 607 25 31 0 0 chr3R 2886043 2886075 -25018978 + AT_rich Low_complexity Low_complexity 1 32 0 4 607 200 111 0 22 chr3R 2886195 2886241 -25018812 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 607 435 91 0 15 chr3R 2886386 2886453 -25018600 - G5A_DM LINE Jockey 0 2841 2776 4 607 21 0 0 0 chr3R 2887842 2887863 -25017190 + AT_rich Low_complexity Low_complexity 1 21 0 4 607 28 61 0 0 chr3R 2906206 2906255 -24998798 + AT_rich Low_complexity Low_complexity 1 49 0 4 607 3150 32 111 3 chr3R 2906429 2907143 -24997910 - G4_DM LINE Jockey 0 3856 3066 4 607 32 0 0 0 chr3R 2907148 2907180 -24997873 + AT_rich Low_complexity Low_complexity 1 32 0 4 607 2631 115 199 4 chr3R 2907280 2907777 -24997276 - DNAREP1_DM LINE Penelope 0 594 1 4 607 23 0 0 0 chr3R 2907862 2907885 -24997168 + AT_rich Low_complexity Low_complexity 1 23 0 4 607 234 0 0 0 chr3R 2909324 2909350 -24995703 + (T)n Simple_repeat Simple_repeat 1 26 0 4 607 201 133 0 0 chr3R 2914917 2914947 -24990106 + (CATA)n Simple_repeat Simple_repeat 3 32 0 4 607 214 154 51 0 chr3R 2915495 2915534 -24989519 + (CATA)n Simple_repeat Simple_repeat 4 44 0 4 607 192 152 0 0 chr3R 2915781 2915814 -24989239 + (CATA)n Simple_repeat Simple_repeat 3 35 0 4 607 448 202 175 57 chr3R 2916085 2916279 -24988774 + HOBO DNA hAT 5 221 -2795 4 607 3311 158 0 0 chr3R 2916318 2916863 -24988190 + HOBO DNA hAT 432 976 -2040 4 607 2908 131 0 0 chr3R 2916877 2917313 -24987740 + HOBO DNA hAT 463 898 -2118 4 607 22 35 0 0 chr3R 2917505 2917534 -24987519 + AT_rich Low_complexity Low_complexity 1 29 0 4 607 212 233 0 0 chr3R 2921387 2921430 -24983623 + (CTG)n Simple_repeat Simple_repeat 2 44 0 4 607 200 194 0 0 chr3R 2921818 2921854 -24983199 + (ACTG)n Simple_repeat Simple_repeat 4 39 0 4 607 333 200 31 10 chr3R 2922332 2922428 -24982625 - ROO_I LTR Pao -7507 749 652 4 607 260 225 27 40 chr3R 2922701 2922775 -24982278 - ROO_I LTR Pao -7529 727 655 4 607 240 172 0 0 chr3R 2923001 2923059 -24981994 + (TTG)n Simple_repeat Simple_repeat 1 58 0 4 607 23 68 0 0 chr3R 2923413 2923457 -24981596 + AT_rich Low_complexity Low_complexity 1 44 0 4 607 201 167 0 0 chr3R 2924857 2924893 -24980160 + (CTG)n Simple_repeat Simple_repeat 2 37 0 4 607 183 167 0 0 chr3R 2925436 2925478 -24979575 + (CTG)n Simple_repeat Simple_repeat 3 44 0 4 607 209 171 0 0 chr3R 2926132 2926167 -24978886 + (CTG)n Simple_repeat Simple_repeat 1 35 0 4 607 187 114 22 22 chr3R 2926177 2926222 -24978831 + (ATGGTG)n Simple_repeat Simple_repeat 3 47 0 4 607 198 0 0 0 chr3R 2926333 2926355 -24978698 + (GA)n Simple_repeat Simple_repeat 1 22 0 4 607 236 230 0 51 chr3R 2927456 2927534 -24977519 - ROO_I LTR Pao -7513 743 670 4 607 38 68 0 0 chr3R 2928226 2928299 -24976754 + AT_rich Low_complexity Low_complexity 1 73 0 4 607 22 0 0 0 chr3R 2928924 2928946 -24976107 + AT_rich Low_complexity Low_complexity 1 22 0 4 607 200 194 0 75 chr3R 2929248 2929315 -24975738 + CT-rich Low_complexity Low_complexity 5 66 0 4 607 315 0 0 0 chr3R 2929388 2929423 -24975630 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 607 21 36 0 0 chr3R 2929723 2929751 -24975302 + AT_rich Low_complexity Low_complexity 1 28 0 4 607 183 186 0 0 chr3R 2933672 2933715 -24971338 + (TTG)n Simple_repeat Simple_repeat 1 43 0 4 607 21 57 0 0 chr3R 2935377 2935412 -24969641 + AT_rich Low_complexity Low_complexity 1 35 0 4 607 31 26 0 0 chr3R 2938440 2938478 -24966575 + AT_rich Low_complexity Low_complexity 1 38 0 4 607 28 0 0 0 chr3R 2939323 2939351 -24965702 + AT_rich Low_complexity Low_complexity 1 28 0 4 607 24 53 0 0 chr3R 2946948 2946986 -24958067 + AT_rich Low_complexity Low_complexity 1 38 0 4 607 509 0 16 0 chr3R 2947482 2947543 -24957510 + (TA)n Simple_repeat Simple_repeat 1 62 0 4 607 23 0 0 0 chr3R 2948512 2948535 -24956518 + AT_rich Low_complexity Low_complexity 1 23 0 4 607 21 0 0 0 chr3R 2952041 2952062 -24952991 + AT_rich Low_complexity Low_complexity 1 21 0 4 607 23 92 0 0 chr3R 2956597 2956662 -24948391 + AT_rich Low_complexity Low_complexity 1 65 0 4 607 23 0 0 0 chr3R 2957052 2957075 -24947978 + AT_rich Low_complexity Low_complexity 1 23 0 4 607 30 69 0 0 chr3R 2960112 2960170 -24944883 + AT_rich Low_complexity Low_complexity 1 58 0 4 607 275 230 68 0 chr3R 2960915 2960989 -24944064 + PENELOPE LINE Penelope 3917 3995 -166 4 607 26 0 0 0 chr3R 2961006 2961032 -24944021 + AT_rich Low_complexity Low_complexity 1 26 0 4 607 21 57 0 0 chr3R 2962420 2962455 -24942598 + AT_rich Low_complexity Low_complexity 1 35 0 4 607 6499 89 18 17 chr3R 2965836 2966784 -24938269 + FB4_DM DNA Tc1 1809 2757 -1332 4 607 698 87 292 109 chr3R 2966830 2967080 -24937973 - DMRP1 Unknown Unknown -10 336 41 4 607 47 33 0 0 chr3R 2971896 2971957 -24933096 + AT_rich Low_complexity Low_complexity 1 61 0 4 607 29 0 0 0 chr3R 2976957 2976986 -24928067 + AT_rich Low_complexity Low_complexity 1 29 0 4 607 24 0 0 0 chr3R 2983680 2983704 -24921349 + AT_rich Low_complexity Low_complexity 1 24 0 4 607 23 33 0 0 chr3R 2983974 2984004 -24921049 + AT_rich Low_complexity Low_complexity 1 30 0 4 607 28 71 0 0 chr3R 2984752 2984808 -24920245 + AT_rich Low_complexity Low_complexity 1 56 0 4 607 185 94 0 30 chr3R 2985260 2985293 -24919760 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 607 200 125 0 24 chr3R 2987250 2987291 -24917762 + (ATTTG)n Simple_repeat Simple_repeat 2 41 0 4 607 31 58 0 0 chr3R 2991140 2991192 -24913861 + AT_rich Low_complexity Low_complexity 1 52 0 4 607 23 0 0 0 chr3R 2992576 2992599 -24912454 + AT_rich Low_complexity Low_complexity 1 23 0 4 607 21 57 0 0 chr3R 2994388 2994423 -24910630 + AT_rich Low_complexity Low_complexity 1 35 0 4 607 23 33 0 0 chr3R 2999799 2999829 -24905224 + AT_rich Low_complexity Low_complexity 1 30 0 4 607 208 226 0 0 chr3R 3000738 3000791 -24904262 + GA-rich Low_complexity Low_complexity 3 55 0 4 607 23 33 0 0 chr3R 3001173 3001203 -24903850 + AT_rich Low_complexity Low_complexity 1 30 0 4 607 362 246 62 38 chr3R 3003557 3003689 -24901364 - DNAREP1_DM LINE Penelope -37 557 431 4 607 315 121 0 0 chr3R 3005934 3005992 -24899061 + (CAG)n Simple_repeat Simple_repeat 3 60 0 4 607 27 49 0 0 chr3R 3007099 3007140 -24897913 + AT_rich Low_complexity Low_complexity 1 41 0 4 607 270 204 0 0 chr3R 3010421 3010509 -24894544 + (CAT)n Simple_repeat Simple_repeat 3 90 0 4 607 22 35 0 0 chr3R 3012335 3012364 -24892689 + AT_rich Low_complexity Low_complexity 1 29 0 4 607 223 113 30 61 chr3R 3012505 3012571 -24892482 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 4 607 24 0 0 0 chr3R 3013440 3013464 -24891589 + AT_rich Low_complexity Low_complexity 1 24 0 4 607 26 30 0 0 chr3R 3013495 3013528 -24891525 + AT_rich Low_complexity Low_complexity 1 33 0 4 608 24 32 0 0 chr3R 3016314 3016345 -24888708 + AT_rich Low_complexity Low_complexity 1 31 0 4 608 26 50 0 0 chr3R 3019842 3019882 -24885171 + AT_rich Low_complexity Low_complexity 1 40 0 4 608 290 193 125 0 chr3R 3020006 3020094 -24884959 + BS LINE Jockey 2022 2120 -3006 4 608 241 167 0 165 chr3R 3020029 3020144 -24884909 + ROO_I LTR Pao 644 739 -7517 4 608 241 127 0 40 chr3R 3021449 3021523 -24883530 + ROO_I LTR Pao 658 728 -7528 4 608 21 36 0 0 chr3R 3022588 3022616 -24882437 + AT_rich Low_complexity Low_complexity 1 28 0 4 608 26 50 0 0 chr3R 3022920 3022960 -24882093 + AT_rich Low_complexity Low_complexity 1 40 0 4 608 223 151 65 75 chr3R 3023053 3023146 -24881907 + (CGAAT)n Simple_repeat Simple_repeat 3 94 0 4 608 228 264 11 22 chr3R 3023201 3023290 -24881763 + (TATATG)n Simple_repeat Simple_repeat 5 92 0 4 608 21 0 0 0 chr3R 3023453 3023474 -24881579 + AT_rich Low_complexity Low_complexity 1 21 0 4 608 191 36 36 0 chr3R 3024259 3024287 -24880766 + (CTCA)n Simple_repeat Simple_repeat 1 29 0 4 608 327 85 0 0 chr3R 3024554 3024601 -24880452 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 608 54 0 0 0 chr3R 3025403 3025457 -24879596 + AT_rich Low_complexity Low_complexity 1 54 0 4 608 28 0 0 0 chr3R 3032360 3032388 -24872665 + AT_rich Low_complexity Low_complexity 1 28 0 4 608 208 224 0 0 chr3R 3033813 3033862 -24871191 + (TGG)n Simple_repeat Simple_repeat 3 51 0 4 608 201 121 0 0 chr3R 3034150 3034183 -24870870 + (TATATG)n Simple_repeat Simple_repeat 3 35 0 4 608 288 0 0 0 chr3R 3035222 3035254 -24869799 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 608 205 29 0 56 chr3R 3035472 3035508 -24869545 + (TATAA)n Simple_repeat Simple_repeat 5 38 0 4 608 28 29 0 0 chr3R 3035540 3035575 -24869478 + AT_rich Low_complexity Low_complexity 1 35 0 4 608 22 35 0 0 chr3R 3038205 3038234 -24866819 + AT_rich Low_complexity Low_complexity 1 29 0 4 608 180 77 0 0 chr3R 3039238 3039264 -24865789 + (CATCC)n Simple_repeat Simple_repeat 4 29 0 4 608 23 0 0 0 chr3R 3043020 3043043 -24862010 + AT_rich Low_complexity Low_complexity 1 23 0 4 608 25 0 0 0 chr3R 3047085 3047110 -24857943 + AT_rich Low_complexity Low_complexity 1 25 0 4 608 22 56 0 0 chr3R 3048188 3048224 -24856829 + AT_rich Low_complexity Low_complexity 1 36 0 4 608 22 0 0 0 chr3R 3050327 3050349 -24854704 + AT_rich Low_complexity Low_complexity 1 22 0 4 608 278 171 14 0 chr3R 3052549 3052619 -24852434 + (GTCTG)n Simple_repeat Simple_repeat 1 71 0 4 608 22 35 0 0 chr3R 3060109 3060138 -24844915 + AT_rich Low_complexity Low_complexity 1 29 0 4 608 402 101 0 0 chr3R 3060776 3060845 -24844208 + (ACTG)n Simple_repeat Simple_repeat 4 72 0 4 608 22 70 0 0 chr3R 3066827 3066870 -24838183 + AT_rich Low_complexity Low_complexity 1 43 0 4 608 202 135 0 26 chr3R 3071996 3072034 -24833019 + CT-rich Low_complexity Low_complexity 2 38 0 4 608 24 0 0 0 chr3R 3075365 3075389 -24829664 + AT_rich Low_complexity Low_complexity 1 24 0 4 608 188 43 64 21 chr3R 3080193 3080240 -24824813 + (TTATA)n Simple_repeat Simple_repeat 3 51 0 4 608 26 50 0 0 chr3R 3081247 3081287 -24823766 + AT_rich Low_complexity Low_complexity 1 40 0 4 608 240 185 0 0 chr3R 3084323 3084377 -24820676 + A-rich Low_complexity Low_complexity 1 54 0 4 608 24 0 0 0 chr3R 3085096 3085120 -24819933 + AT_rich Low_complexity Low_complexity 1 24 0 4 608 357 93 0 0 chr3R 3085487 3085541 -24819512 + (CAGT)n Simple_repeat Simple_repeat 3 56 0 4 608 21 36 0 0 chr3R 3086932 3086960 -24818093 + AT_rich Low_complexity Low_complexity 1 28 0 4 608 189 0 0 0 chr3R 3092237 3092258 -24812795 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 608 22 35 0 0 chr3R 3095625 3095654 -24809399 + AT_rich Low_complexity Low_complexity 1 29 0 4 608 22 35 0 0 chr3R 3097155 3097184 -24807869 + AT_rich Low_complexity Low_complexity 1 29 0 4 608 37 0 0 0 chr3R 3098759 3098796 -24806257 + AT_rich Low_complexity Low_complexity 1 37 0 4 608 700 191 156 85 chr3R 3100150 3100491 -24804562 + DNAREP1_DM LINE Penelope 27 495 -99 4 608 261 151 0 0 chr3R 3100847 3100900 -24804153 + (CTG)n Simple_repeat Simple_repeat 1 53 0 4 608 343 160 0 0 chr3R 3100931 3101025 -24804028 - ROO_I LTR Pao -7524 732 639 4 608 363 113 0 0 chr3R 3102824 3102886 -24802167 + (CTG)n Simple_repeat Simple_repeat 3 64 0 4 608 24 32 0 0 chr3R 3103288 3103319 -24801734 + AT_rich Low_complexity Low_complexity 1 31 0 4 608 25 75 0 0 chr3R 3106555 3106608 -24798445 + AT_rich Low_complexity Low_complexity 1 53 0 4 608 224 148 16 0 chr3R 3107940 3108001 -24797052 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 608 203 175 25 0 chr3R 3108291 3108331 -24796722 + (CAG)n Simple_repeat Simple_repeat 1 41 0 4 608 201 133 0 0 chr3R 3108646 3108676 -24796377 + (GA)n Simple_repeat Simple_repeat 2 31 0 4 608 240 111 0 0 chr3R 3114323 3114359 -24790694 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 608 216 276 0 0 chr3R 3114564 3114622 -24790431 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 608 27 0 0 0 chr3R 3115503 3115530 -24789523 + AT_rich Low_complexity Low_complexity 1 27 0 4 608 189 0 0 0 chr3R 3115793 3115814 -24789239 + (A)n Simple_repeat Simple_repeat 1 21 0 4 608 263 288 0 0 chr3R 3119015 3119074 -24785979 + (CAG)n Simple_repeat Simple_repeat 3 61 0 4 608 21 36 0 0 chr3R 3119495 3119523 -24785530 + AT_rich Low_complexity Low_complexity 1 28 0 4 608 192 200 0 0 chr3R 3121161 3121216 -24783837 + (TGGG)n Simple_repeat Simple_repeat 2 56 0 4 608 192 200 0 0 chr3R 3122907 3122947 -24782106 + (CAG)n Simple_repeat Simple_repeat 1 40 0 4 608 21 0 0 0 chr3R 3125925 3125946 -24779107 + AT_rich Low_complexity Low_complexity 1 21 0 4 608 261 119 0 0 chr3R 3126508 3126550 -24778503 + (CGG)n Simple_repeat Simple_repeat 2 43 0 4 608 23 0 0 0 chr3R 3128659 3128682 -24776371 + AT_rich Low_complexity Low_complexity 1 23 0 4 608 215 277 0 15 chr3R 3129142 3129208 -24775845 + (TCCG)n Simple_repeat Simple_repeat 3 67 0 4 608 342 45 0 0 chr3R 3129323 3129367 -24775686 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 608 189 74 0 0 chr3R 3130960 3130987 -24774066 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 608 24 0 0 0 chr3R 3131596 3131620 -24773433 + AT_rich Low_complexity Low_complexity 1 24 0 4 608 21 0 0 0 chr3R 3132962 3132983 -24772070 + AT_rich Low_complexity Low_complexity 1 21 0 4 608 198 171 0 0 chr3R 3133715 3133756 -24771297 + (CGG)n Simple_repeat Simple_repeat 1 41 0 4 608 29 0 0 0 chr3R 3134368 3134397 -24770656 + AT_rich Low_complexity Low_complexity 1 29 0 4 608 23 0 0 0 chr3R 3134559 3134582 -24770471 + AT_rich Low_complexity Low_complexity 1 23 0 4 608 207 200 0 0 chr3R 3135576 3135621 -24769432 + CT-rich Low_complexity Low_complexity 2 46 0 4 608 25 65 0 0 chr3R 3136650 3136696 -24768357 + AT_rich Low_complexity Low_complexity 1 46 0 4 608 24 53 0 0 chr3R 3137359 3137397 -24767656 + AT_rich Low_complexity Low_complexity 1 38 0 4 608 235 151 245 0 chr3R 3137694 3137747 -24767306 - DNAREP1_DM LINE Penelope 0 594 529 4 608 493 246 174 51 chr3R 3137770 3138121 -24766932 - DNAREP1_DM LINE Penelope -188 406 13 4 608 22 70 0 0 chr3R 3138161 3138204 -24766849 + AT_rich Low_complexity Low_complexity 1 43 0 4 608 28 0 0 0 chr3R 3139554 3139582 -24765471 + AT_rich Low_complexity Low_complexity 1 28 0 4 608 21 0 0 0 chr3R 3139976 3139997 -24765056 + AT_rich Low_complexity Low_complexity 1 21 0 4 608 31 26 0 0 chr3R 3140934 3140972 -24764081 + AT_rich Low_complexity Low_complexity 1 38 0 4 608 735 138 8 16 chr3R 3143227 3143352 -24761701 + DNAREP1_DM LINE Penelope 1 124 -470 4 608 21 0 0 0 chr3R 3143820 3143841 -24761212 + AT_rich Low_complexity Low_complexity 1 21 0 4 608 23 0 0 0 chr3R 3144015 3144038 -24761015 + AT_rich Low_complexity Low_complexity 1 23 0 4 609 25 0 0 0 chr3R 3145907 3145932 -24759121 + AT_rich Low_complexity Low_complexity 1 25 0 4 609 39 50 0 0 chr3R 3146027 3146087 -24758966 + AT_rich Low_complexity Low_complexity 1 60 0 4 609 198 191 0 0 chr3R 3148499 3148546 -24756507 + A-rich Low_complexity Low_complexity 1 47 0 4 609 41 58 0 0 chr3R 3148731 3148800 -24756253 + AT_rich Low_complexity Low_complexity 1 69 0 4 609 22 0 0 0 chr3R 3150411 3150433 -24754620 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 21 0 0 0 chr3R 3150554 3150575 -24754478 + AT_rich Low_complexity Low_complexity 1 21 0 4 609 596 169 8 61 chr3R 3153158 3153290 -24751763 + DNAREP1_DM LINE Penelope 363 487 -107 4 609 268 233 0 40 chr3R 3156170 3156246 -24748807 - ROO_I LTR Pao -7543 713 641 4 609 25 51 0 0 chr3R 3160467 3160506 -24744547 + AT_rich Low_complexity Low_complexity 1 39 0 4 609 183 220 0 0 chr3R 3162071 3162121 -24742932 + CT-rich Low_complexity Low_complexity 2 51 0 4 609 28 29 0 0 chr3R 3163937 3163972 -24741081 + AT_rich Low_complexity Low_complexity 1 35 0 4 609 35 0 0 0 chr3R 3164011 3164046 -24741007 + AT_rich Low_complexity Low_complexity 1 35 0 4 609 189 0 0 0 chr3R 3164229 3164250 -24740803 + (TTA)n Simple_repeat Simple_repeat 3 23 0 4 609 21 71 0 0 chr3R 3165562 3165604 -24739449 + AT_rich Low_complexity Low_complexity 1 42 0 4 609 30 59 0 0 chr3R 3167140 3167191 -24737862 + AT_rich Low_complexity Low_complexity 1 51 0 4 609 470 200 460 32 chr3R 3167266 3167601 -24737452 - DNAREP1_DM LINE Penelope -109 485 7 4 609 329 329 0 0 chr3R 3171631 3171777 -24733276 + (CTG)n Simple_repeat Simple_repeat 3 148 0 4 609 25 0 0 0 chr3R 3172160 3172185 -24732868 + AT_rich Low_complexity Low_complexity 1 25 0 4 609 22 35 0 0 chr3R 3173519 3173548 -24731505 + AT_rich Low_complexity Low_complexity 1 29 0 4 609 215 93 0 23 chr3R 3175437 3175481 -24729572 + (TATAA)n Simple_repeat Simple_repeat 2 44 0 4 609 4130 13 0 61 chr3R 3175485 3175992 -24729061 - MICROPIA_LTR LTR Gypsy 0 476 1 4 609 40130 7 12 9 chr3R 3175996 3180449 -24724604 - MICROPIA_I LTR Gypsy -12 4464 1 4 609 4130 13 0 61 chr3R 3180449 3180956 -24724097 - MICROPIA_LTR LTR Gypsy 0 476 1 4 609 21 36 0 0 chr3R 3180956 3180984 -24724069 + AT_rich Low_complexity Low_complexity 1 28 0 4 609 1720 0 0 0 chr3R 3180984 3181170 -24723883 - POGON1 DNA Pogo 0 186 1 4 609 22 0 0 0 chr3R 3189564 3189586 -24715467 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 21 36 0 0 chr3R 3191462 3191490 -24713563 + AT_rich Low_complexity Low_complexity 1 28 0 4 609 27 0 0 0 chr3R 3195057 3195084 -24709969 + AT_rich Low_complexity Low_complexity 1 27 0 4 609 21 0 0 0 chr3R 3195290 3195311 -24709742 + AT_rich Low_complexity Low_complexity 1 21 0 4 609 22 35 0 0 chr3R 3196042 3196071 -24708982 + AT_rich Low_complexity Low_complexity 1 29 0 4 609 22 0 0 0 chr3R 3196286 3196308 -24708745 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 22 0 0 0 chr3R 3196824 3196846 -24708207 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 22 0 0 0 chr3R 3198479 3198501 -24706552 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 340 229 0 0 chr3R 3198501 3198571 -24706482 + DNAREP1_DM LINE Penelope 525 594 0 4 609 213 94 0 0 chr3R 3199417 3199449 -24705604 + (A)n Simple_repeat Simple_repeat 1 32 0 4 609 25 0 0 0 chr3R 3200481 3200506 -24704547 + AT_rich Low_complexity Low_complexity 1 25 0 4 609 24 77 0 0 chr3R 3200590 3200642 -24704411 + AT_rich Low_complexity Low_complexity 1 52 0 4 609 183 129 0 0 chr3R 3203955 3203986 -24701067 + (ATG)n Simple_repeat Simple_repeat 1 31 0 4 609 22 0 0 0 chr3R 3206740 3206762 -24698291 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 327 113 0 0 chr3R 3207074 3207127 -24697926 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 609 21 57 0 0 chr3R 3207254 3207289 -24697764 + AT_rich Low_complexity Low_complexity 1 35 0 4 609 256 211 0 17 chr3R 3208057 3208115 -24696938 + (ACTG)n Simple_repeat Simple_repeat 1 57 0 4 609 39 50 0 0 chr3R 3208427 3208487 -24696566 + AT_rich Low_complexity Low_complexity 1 60 0 4 609 230 125 21 0 chr3R 3213089 3213137 -24691916 + (CTTA)n Simple_repeat Simple_repeat 4 52 0 4 609 22 0 0 0 chr3R 3213139 3213161 -24691892 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 206 270 14 0 chr3R 3213619 3213693 -24691360 + (CCCA)n Simple_repeat Simple_repeat 2 76 0 4 609 242 267 17 0 chr3R 3214198 3214258 -24690795 + (TTCGGG)n Simple_repeat Simple_repeat 3 63 0 4 609 26 0 0 0 chr3R 3215134 3215160 -24689893 + AT_rich Low_complexity Low_complexity 1 26 0 4 609 24 0 0 0 chr3R 3218802 3218826 -24686227 + AT_rich Low_complexity Low_complexity 1 24 0 4 609 24 0 0 0 chr3R 3221095 3221119 -24683934 + AT_rich Low_complexity Low_complexity 1 24 0 4 609 225 119 0 0 chr3R 3222154 3222196 -24682857 + (A)n Simple_repeat Simple_repeat 1 42 0 4 609 21 0 0 0 chr3R 3223959 3223980 -24681073 + AT_rich Low_complexity Low_complexity 1 21 0 4 609 27 29 0 0 chr3R 3225190 3225224 -24679829 + AT_rich Low_complexity Low_complexity 1 34 0 4 609 23 33 0 0 chr3R 3225631 3225661 -24679392 + AT_rich Low_complexity Low_complexity 1 30 0 4 609 24 77 0 0 chr3R 3229131 3229183 -24675870 + AT_rich Low_complexity Low_complexity 1 52 0 4 609 216 0 0 0 chr3R 3230245 3230269 -24674784 + (TAA)n Simple_repeat Simple_repeat 1 24 0 4 609 227 200 0 98 chr3R 3232014 3232075 -24672978 + DNAREP1_DM LINE Penelope 431 485 -109 4 609 24 0 0 0 chr3R 3232264 3232288 -24672765 + AT_rich Low_complexity Low_complexity 1 24 0 4 609 22 35 0 0 chr3R 3240121 3240150 -24664903 + AT_rich Low_complexity Low_complexity 1 29 0 4 609 231 36 0 0 chr3R 3241955 3241983 -24663070 + (CAG)n Simple_repeat Simple_repeat 1 28 0 4 609 21 57 0 0 chr3R 3242254 3242289 -24662764 + AT_rich Low_complexity Low_complexity 1 35 0 4 609 33 56 0 0 chr3R 3243190 3243244 -24661809 + AT_rich Low_complexity Low_complexity 1 54 0 4 609 23 33 0 0 chr3R 3244275 3244305 -24660748 + AT_rich Low_complexity Low_complexity 1 30 0 4 609 25 0 0 0 chr3R 3246147 3246172 -24658881 + AT_rich Low_complexity Low_complexity 1 25 0 4 609 189 147 0 0 chr3R 3250012 3250046 -24655007 + (CAAAA)n Simple_repeat Simple_repeat 4 37 0 4 609 272 189 0 39 chr3R 3250098 3250175 -24654878 - ROO_I LTR Pao -7531 725 652 4 609 200 273 0 0 chr3R 3250524 3250579 -24654474 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 609 21 0 0 0 chr3R 3253457 3253478 -24651575 + AT_rich Low_complexity Low_complexity 1 21 0 4 609 226 219 0 0 chr3R 3253653 3253694 -24651359 + (CCA)n Simple_repeat Simple_repeat 2 42 0 4 609 30 45 0 0 chr3R 3255212 3255256 -24649797 + AT_rich Low_complexity Low_complexity 1 44 0 4 609 22 88 0 0 chr3R 3255331 3255388 -24649665 + AT_rich Low_complexity Low_complexity 1 57 0 4 609 313 95 0 31 chr3R 3257127 3257192 -24647861 + (TGG)n Simple_repeat Simple_repeat 2 64 0 4 609 205 175 0 0 chr3R 3258213 3258253 -24646800 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 609 24 0 0 0 chr3R 3260604 3260628 -24644425 + AT_rich Low_complexity Low_complexity 1 24 0 4 609 317 148 0 62 chr3R 3262035 3262100 -24642953 + DNAREP1_DM LINE Penelope 1 61 -533 4 609 245 118 0 0 chr3R 3262259 3262293 -24642760 + DNAREP1_DM LINE Penelope 448 481 -113 4 609 333 0 0 0 chr3R 3262293 3262330 -24642723 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 609 38 22 0 0 chr3R 3262539 3262584 -24642469 + AT_rich Low_complexity Low_complexity 1 45 0 4 609 29 0 0 0 chr3R 3263086 3263115 -24641938 + AT_rich Low_complexity Low_complexity 1 29 0 4 609 36 0 0 0 chr3R 3264215 3264251 -24640802 + AT_rich Low_complexity Low_complexity 1 36 0 4 609 189 121 0 0 chr3R 3264596 3264629 -24640424 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 4 609 21 0 0 0 chr3R 3265335 3265356 -24639697 + AT_rich Low_complexity Low_complexity 1 21 0 4 609 25 51 0 0 chr3R 3266419 3266458 -24638595 + AT_rich Low_complexity Low_complexity 1 39 0 4 609 261 146 0 0 chr3R 3266693 3266741 -24638312 + (CGA)n Simple_repeat Simple_repeat 3 50 0 4 609 23 33 0 0 chr3R 3271664 3271694 -24633359 + AT_rich Low_complexity Low_complexity 1 30 0 4 609 22 0 0 0 chr3R 3272172 3272194 -24632859 + AT_rich Low_complexity Low_complexity 1 22 0 4 609 257 0 0 29 chr3R 3273755 3273789 -24631264 + (TAAAA)n Simple_repeat Simple_repeat 4 36 0 4 609 214 91 28 83 chr3R 3276110 3276182 -24628871 + (TTATA)n Simple_repeat Simple_repeat 5 72 0 4 610 507 195 159 79 chr3R 3277377 3277566 -24627487 + DNAREP1_DM LINE Penelope 1 204 -390 4 610 379 228 0 80 chr3R 3277562 3277662 -24627391 + DNAREP1_DM LINE Penelope 395 486 -108 4 610 21 57 0 0 chr3R 3277868 3277903 -24627150 + AT_rich Low_complexity Low_complexity 1 35 0 4 610 21 82 0 0 chr3R 3280320 3280369 -24624684 + AT_rich Low_complexity Low_complexity 1 49 0 4 610 252 0 0 0 chr3R 3282806 3282834 -24622219 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 4 610 228 227 0 0 chr3R 3284335 3284423 -24620630 + (TG)n Simple_repeat Simple_repeat 1 88 0 4 610 210 37 0 0 chr3R 3286833 3286860 -24618193 + (GA)n Simple_repeat Simple_repeat 1 27 0 4 610 25 0 0 0 chr3R 3288530 3288555 -24616498 + AT_rich Low_complexity Low_complexity 1 25 0 4 610 283 197 0 16 chr3R 3293583 3293645 -24611408 + DNAREP1_DM LINE Penelope 28 88 -506 4 610 275 191 0 31 chr3R 3294892 3294957 -24610096 + (CCCGAA)n Simple_repeat Simple_repeat 6 68 0 4 610 30 0 0 0 chr3R 3296770 3296800 -24608253 + AT_rich Low_complexity Low_complexity 1 30 0 4 610 5086 61 6 0 chr3R 3296800 3297487 -24607566 - BS2 LINE Jockey 0 4721 4031 4 610 28 29 0 0 chr3R 3297741 3297776 -24607277 + AT_rich Low_complexity Low_complexity 1 35 0 4 610 30 0 0 0 chr3R 3298182 3298212 -24606841 + AT_rich Low_complexity Low_complexity 1 30 0 4 610 27 29 0 0 chr3R 3300220 3300254 -24604799 + AT_rich Low_complexity Low_complexity 1 34 0 4 610 41 48 0 0 chr3R 3301160 3301222 -24603831 + AT_rich Low_complexity Low_complexity 1 62 0 4 610 1240 60 118 151 chr3R 3301281 3301559 -24603494 + HELENA_RT LINE Jockey 1086 1317 0 4 610 21 0 0 0 chr3R 3306004 3306025 -24599028 + AT_rich Low_complexity Low_complexity 1 21 0 4 610 22 0 0 0 chr3R 3307348 3307370 -24597683 + AT_rich Low_complexity Low_complexity 1 22 0 4 610 26 88 0 0 chr3R 3307417 3307485 -24597568 + AT_rich Low_complexity Low_complexity 1 68 0 4 610 25 65 0 0 chr3R 3307962 3308008 -24597045 + AT_rich Low_complexity Low_complexity 1 46 0 4 610 21 0 0 0 chr3R 3308808 3308829 -24596224 + AT_rich Low_complexity Low_complexity 1 21 0 4 610 189 0 0 0 chr3R 3311783 3311804 -24593249 + (A)n Simple_repeat Simple_repeat 1 21 0 4 610 23 0 0 0 chr3R 3312244 3312267 -24592786 + AT_rich Low_complexity Low_complexity 1 23 0 4 610 33 25 0 0 chr3R 3314378 3314418 -24590635 + AT_rich Low_complexity Low_complexity 1 40 0 4 610 24 85 0 0 chr3R 3316747 3316806 -24588247 + AT_rich Low_complexity Low_complexity 1 59 0 4 610 21 57 0 0 chr3R 3319613 3319648 -24585405 + AT_rich Low_complexity Low_complexity 1 35 0 4 610 205 179 0 0 chr3R 3323375 3323414 -24581639 + T-rich Low_complexity Low_complexity 3 41 0 4 610 275 200 0 0 chr3R 3326530 3326590 -24578463 - DNAREP1_DM LINE Penelope -22 572 513 4 610 26 0 0 0 chr3R 3330363 3330389 -24574664 + AT_rich Low_complexity Low_complexity 1 26 0 4 610 22 0 0 0 chr3R 3330413 3330435 -24574618 + AT_rich Low_complexity Low_complexity 1 22 0 4 610 23 0 0 0 chr3R 3332888 3332911 -24572142 + AT_rich Low_complexity Low_complexity 1 23 0 4 610 289 157 39 0 chr3R 3343051 3343102 -24561951 - DNAREP1_DM LINE Penelope -136 458 406 4 610 357 165 350 42 chr3R 3343151 3343310 -24561743 + DNAREP1_DM LINE Penelope 387 594 0 4 610 257 116 0 44 chr3R 3343682 3343727 -24561326 + PROTOP_A DNA P 511 553 -552 4 610 291 233 41 0 chr3R 3344216 3344289 -24560764 - DNAREP1_DM LINE Penelope -175 419 344 4 610 229 183 158 88 chr3R 3353448 3353562 -24551491 - GTWIN_I LTR Gypsy -1014 5407 5286 4 610 24 0 0 0 chr3R 3355767 3355791 -24549262 + AT_rich Low_complexity Low_complexity 1 24 0 4 610 252 240 152 48 chr3R 3359516 3359621 -24545432 + DNAREP1_DM LINE Penelope 426 541 -53 4 610 25 51 0 0 chr3R 3359670 3359709 -24545344 + AT_rich Low_complexity Low_complexity 1 39 0 4 610 22 35 0 0 chr3R 3361319 3361348 -24543705 + AT_rich Low_complexity Low_complexity 1 29 0 4 610 22 0 0 0 chr3R 3367261 3367283 -24537770 + AT_rich Low_complexity Low_complexity 1 22 0 4 610 36 53 0 0 chr3R 3368033 3368090 -24536963 + AT_rich Low_complexity Low_complexity 1 57 0 4 610 24 32 0 0 chr3R 3368182 3368213 -24536840 + AT_rich Low_complexity Low_complexity 1 31 0 4 610 274 23 47 0 chr3R 3368217 3368260 -24536793 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 610 30 0 0 0 chr3R 3369563 3369593 -24535460 + AT_rich Low_complexity Low_complexity 1 30 0 4 610 21 0 0 0 chr3R 3371456 3371477 -24533576 + AT_rich Low_complexity Low_complexity 1 21 0 4 610 26 64 0 0 chr3R 3371583 3371630 -24533423 + AT_rich Low_complexity Low_complexity 1 47 0 4 610 348 43 0 0 chr3R 3378351 3378397 -24526656 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 610 32 26 0 0 chr3R 3378900 3378939 -24526114 + AT_rich Low_complexity Low_complexity 1 39 0 4 610 26 30 0 0 chr3R 3379889 3379922 -24525131 + AT_rich Low_complexity Low_complexity 1 33 0 4 610 195 42 0 0 chr3R 3381032 3381056 -24523997 + (TACTG)n Simple_repeat Simple_repeat 5 28 0 4 610 262 122 0 0 chr3R 3384182 3384223 -24520830 - DNAREP1_DM LINE Penelope -540 54 14 4 610 43462 0 0 0 chr3R 3384297 3388996 -24516057 + DOC LINE Jockey 16 4713 -12 4 610 270 0 0 0 chr3R 3391112 3391142 -24513911 + (CAGC)n Simple_repeat Simple_repeat 4 33 0 4 610 30 27 0 0 chr3R 3392768 3392805 -24512248 + AT_rich Low_complexity Low_complexity 1 37 0 4 610 21 36 0 0 chr3R 3393882 3393910 -24511143 + AT_rich Low_complexity Low_complexity 1 28 0 4 610 180 0 0 0 chr3R 3394986 3395006 -24510047 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 610 27 62 0 0 chr3R 3395976 3396024 -24509029 + AT_rich Low_complexity Low_complexity 1 48 0 4 610 28 0 0 0 chr3R 3396265 3396293 -24508760 + AT_rich Low_complexity Low_complexity 1 28 0 4 610 438 120 0 0 chr3R 3397993 3398068 -24506985 + (CTG)n Simple_repeat Simple_repeat 3 77 0 4 610 279 79 0 0 chr3R 3398194 3398232 -24506821 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 610 21 0 0 0 chr3R 3404316 3404337 -24500716 + AT_rich Low_complexity Low_complexity 1 21 0 4 610 29 70 0 0 chr3R 3405174 3405231 -24499822 + AT_rich Low_complexity Low_complexity 1 57 0 4 610 234 174 0 0 chr3R 3405841 3405887 -24499166 + (CAG)n Simple_repeat Simple_repeat 3 48 0 4 611 21 0 0 0 chr3R 3408721 3408742 -24496311 + AT_rich Low_complexity Low_complexity 1 21 0 4 611 30 0 0 0 chr3R 3410236 3410266 -24494787 + AT_rich Low_complexity Low_complexity 1 30 0 4 611 21 36 0 0 chr3R 3417760 3417788 -24487265 + AT_rich Low_complexity Low_complexity 1 28 0 4 611 21 0 0 0 chr3R 3434533 3434554 -24470499 + AT_rich Low_complexity Low_complexity 1 21 0 4 611 23 68 0 0 chr3R 3436793 3436837 -24468216 + AT_rich Low_complexity Low_complexity 1 44 0 4 611 22 56 0 0 chr3R 3437477 3437513 -24467540 + AT_rich Low_complexity Low_complexity 1 36 0 4 611 30 0 0 0 chr3R 3441314 3441344 -24463709 + AT_rich Low_complexity Low_complexity 1 30 0 4 611 211 229 0 0 chr3R 3443246 3443294 -24461759 + T-rich Low_complexity Low_complexity 1 48 0 4 611 22 0 0 0 chr3R 3447933 3447955 -24457098 + AT_rich Low_complexity Low_complexity 1 22 0 4 611 252 0 0 0 chr3R 3448346 3448374 -24456679 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 611 27 73 0 0 chr3R 3448863 3448918 -24456135 + AT_rich Low_complexity Low_complexity 1 55 0 4 611 24 67 0 0 chr3R 3452503 3452548 -24452505 + AT_rich Low_complexity Low_complexity 1 45 0 4 611 23 0 0 0 chr3R 3453536 3453559 -24451494 + AT_rich Low_complexity Low_complexity 1 23 0 4 611 189 74 0 0 chr3R 3461114 3461141 -24443912 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 4 611 21 0 0 0 chr3R 3463131 3463152 -24441901 + AT_rich Low_complexity Low_complexity 1 21 0 4 611 32 86 0 0 chr3R 3463373 3463454 -24441599 + AT_rich Low_complexity Low_complexity 1 81 0 4 611 1802 123 19 45 chr3R 3465885 3466259 -24438794 + FB4_DM DNA Tc1 2398 2761 -1328 4 611 1855 161 160 45 chr3R 3466839 3467371 -24437682 - HOBO DNA hAT 0 3016 2424 4 611 46 19 0 0 chr3R 3467387 3467440 -24437613 + AT_rich Low_complexity Low_complexity 1 53 0 4 611 268 86 86 0 chr3R 3467456 3467514 -24437539 - HOBO DNA hAT -611 2405 2343 4 611 3346 122 130 3 chr3R 3467524 3468131 -24436922 - HOBO DNA hAT -2069 947 264 4 611 415 280 65 23 chr3R 3468842 3469058 -24435995 + MICROPIA_I LTR Gypsy 1849 2073 -2403 4 611 448 312 1 2 chr3R 3469125 3469305 -24435748 + MICROPIA_I LTR Gypsy 2239 2430 -1669 4 611 38 39 0 0 chr3R 3470570 3470622 -24434431 + AT_rich Low_complexity Low_complexity 1 52 0 4 611 32 26 0 0 chr3R 3471576 3471615 -24433438 + AT_rich Low_complexity Low_complexity 1 39 0 4 611 28 29 0 0 chr3R 3476287 3476322 -24428731 + AT_rich Low_complexity Low_complexity 1 35 0 4 611 22 35 0 0 chr3R 3476950 3476979 -24428074 + AT_rich Low_complexity Low_complexity 1 29 0 4 611 203 208 0 20 chr3R 3477656 3477705 -24427348 + (CAA)n Simple_repeat Simple_repeat 1 48 0 4 611 22 35 0 0 chr3R 3478001 3478030 -24427023 + AT_rich Low_complexity Low_complexity 1 29 0 4 611 22 35 0 0 chr3R 3478171 3478200 -24426853 + AT_rich Low_complexity Low_complexity 1 29 0 4 611 761 40 10 0 chr3R 3478220 3478321 -24426732 + (TA)n Simple_repeat Simple_repeat 2 103 0 4 611 240 93 70 0 chr3R 3481791 3481834 -24423219 + DNAREP1_DM LINE Penelope 263 308 -286 4 611 369 174 11 65 chr3R 3481821 3481913 -24423140 + DNAREP1_DM LINE Penelope 506 592 -2 4 611 250 264 0 0 chr3R 3482276 3482348 -24422705 + DNAREP1_DM LINE Penelope 1 72 -522 4 611 23 78 0 0 chr3R 3482501 3482552 -24422501 + AT_rich Low_complexity Low_complexity 1 51 0 4 611 30 0 0 0 chr3R 3483003 3483033 -24422020 + AT_rich Low_complexity Low_complexity 1 30 0 4 611 210 171 0 0 chr3R 3490670 3490711 -24414342 + (CAG)n Simple_repeat Simple_repeat 3 43 0 4 611 202 139 23 0 chr3R 3495284 3495327 -24409726 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 611 265 272 17 17 chr3R 3502492 3502608 -24402445 + (CAA)n Simple_repeat Simple_repeat 3 118 0 4 611 38 51 0 0 chr3R 3503422 3503481 -24401572 + AT_rich Low_complexity Low_complexity 1 59 0 4 611 21 57 0 0 chr3R 3503713 3503748 -24401305 + AT_rich Low_complexity Low_complexity 1 35 0 4 611 27 49 0 0 chr3R 3505903 3505944 -24399109 + AT_rich Low_complexity Low_complexity 1 41 0 4 611 212 147 0 0 chr3R 3507304 3507338 -24397715 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 611 2546 7 42 0 chr3R 3520353 3520639 -24384414 + Invader3_LTR LTR Gypsy 1 298 0 4 611 7295 5 0 0 chr3R 3520639 3521431 -24383622 + Invader3_I LTR Gypsy 1 792 -4096 4 611 1766 169 19 92 chr3R 3521431 3521854 -24383199 + Gypsy3_LTR LTR Gypsy 1 392 -6 4 611 240 111 0 62 chr3R 3521876 3521924 -24383129 + Gypsy3_LTR LTR Gypsy 354 398 0 4 611 23044 229 21 23 chr3R 3521940 3528654 -24376399 + Gypsy6_I LTR Gypsy 27 7012 0 4 611 1766 169 19 92 chr3R 3528656 3529079 -24375974 + Gypsy3_LTR LTR Gypsy 1 392 -6 4 611 240 111 0 62 chr3R 3529101 3529149 -24375904 + Gypsy3_LTR LTR Gypsy 354 398 0 4 611 37322 5 1 3 chr3R 3529149 3533255 -24371798 + Invader3_I LTR Gypsy 789 4888 0 4 611 2546 7 42 0 chr3R 3533255 3533541 -24371512 + Invader3_LTR LTR Gypsy 1 298 0 4 611 6465 6 0 0 chr3R 3533541 3534246 -24370807 + Invader3_I LTR Gypsy 1 705 -4183 4 76 43999 7 1 5 chr3R 3534219 3539071 -24365982 + Invader3_I LTR Gypsy 57 4888 0 4 612 2546 7 42 0 chr3R 3539071 3539357 -24365696 + Invader3_LTR LTR Gypsy 1 298 0 4 612 21 57 0 0 chr3R 3539930 3539965 -24365088 + AT_rich Low_complexity Low_complexity 1 35 0 4 612 31 0 0 0 chr3R 3542849 3542880 -24362173 + AT_rich Low_complexity Low_complexity 1 31 0 4 612 22 0 0 0 chr3R 3543466 3543488 -24361565 + AT_rich Low_complexity Low_complexity 1 22 0 4 612 22 0 0 0 chr3R 3554631 3554653 -24350400 + AT_rich Low_complexity Low_complexity 1 22 0 4 612 3868 2 0 0 chr3R 3555242 3555666 -24349387 + Stalker2_LTR LTR Gypsy 1 424 0 4 612 14023 5 3 1 chr3R 3555666 3557255 -24347798 + Stalker2_I LTR Gypsy 1 1592 -5810 4 612 38394 19 5 2 chr3R 3557454 3562699 -24342354 + Stalker2_I LTR Gypsy 1574 6530 0 4 612 3630 2 0 0 chr3R 3562699 3563123 -24341930 + Stalker2_LTR LTR Gypsy 1 424 0 4 612 23 0 0 0 chr3R 3565708 3565731 -24339322 + AT_rich Low_complexity Low_complexity 1 23 0 4 612 22 0 0 0 chr3R 3569646 3569668 -24335385 + AT_rich Low_complexity Low_complexity 1 22 0 4 612 26 0 0 0 chr3R 3574990 3575016 -24330037 + AT_rich Low_complexity Low_complexity 1 26 0 4 612 27 87 0 0 chr3R 3576023 3576092 -24328961 + AT_rich Low_complexity Low_complexity 1 69 0 4 612 239 211 0 0 chr3R 3576099 3576151 -24328902 - DNAREP1_DM LINE Penelope -541 53 2 4 612 21 0 0 0 chr3R 3577009 3577030 -24328023 + AT_rich Low_complexity Low_complexity 1 21 0 4 612 21 36 0 0 chr3R 3580024 3580052 -24325001 + AT_rich Low_complexity Low_complexity 1 28 0 4 612 23 0 0 0 chr3R 3580849 3580872 -24324181 + AT_rich Low_complexity Low_complexity 1 23 0 4 612 29 60 0 0 chr3R 3581919 3581969 -24323084 + AT_rich Low_complexity Low_complexity 1 50 0 4 612 198 156 0 0 chr3R 3583141 3583186 -24321867 + (GGATG)n Simple_repeat Simple_repeat 1 45 0 4 612 350 141 0 30 chr3R 3584835 3584901 -24320152 - DNAREP1_DM LINE Penelope -529 65 2 4 612 53 0 0 0 chr3R 3585344 3585397 -24319656 + AT_rich Low_complexity Low_complexity 1 53 0 4 612 44 0 0 0 chr3R 3587557 3587601 -24317452 + AT_rich Low_complexity Low_complexity 1 44 0 4 612 24 67 0 0 chr3R 3589835 3589880 -24315173 + AT_rich Low_complexity Low_complexity 1 45 0 4 612 26 74 0 0 chr3R 3590093 3590147 -24314906 + AT_rich Low_complexity Low_complexity 1 54 0 4 612 1246 139 63 25 chr3R 3590204 3590546 -24314507 - DNAREP1_DM LINE Penelope 0 594 202 4 612 21 36 0 0 chr3R 3590679 3590707 -24314346 + AT_rich Low_complexity Low_complexity 1 28 0 4 612 224 233 0 16 chr3R 3591170 3591231 -24313822 + (CAACC)n Simple_repeat Simple_repeat 4 63 0 4 612 22 0 0 0 chr3R 3593486 3593508 -24311545 + AT_rich Low_complexity Low_complexity 1 22 0 4 612 237 83 0 0 chr3R 3593898 3593934 -24311119 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 612 32 26 0 0 chr3R 3594110 3594149 -24310904 + AT_rich Low_complexity Low_complexity 1 39 0 4 612 28 0 0 0 chr3R 3599018 3599046 -24306007 + AT_rich Low_complexity Low_complexity 1 28 0 4 612 25 65 0 0 chr3R 3601505 3601551 -24303502 + AT_rich Low_complexity Low_complexity 1 46 0 4 612 273 151 0 0 chr3R 3602190 3602243 -24302810 + (TTCGGG)n Simple_repeat Simple_repeat 2 54 0 4 612 21 0 0 0 chr3R 3603831 3603852 -24301201 + AT_rich Low_complexity Low_complexity 1 21 0 4 612 22 0 0 0 chr3R 3606454 3606476 -24298577 + AT_rich Low_complexity Low_complexity 1 22 0 4 612 21 0 0 0 chr3R 3611307 3611328 -24293725 + AT_rich Low_complexity Low_complexity 1 21 0 4 612 240 100 44 111 chr3R 3615032 3615122 -24289931 - PROTOP_B DNA P -561 592 509 4 612 23 33 0 0 chr3R 3619055 3619085 -24285968 + AT_rich Low_complexity Low_complexity 1 30 0 4 612 39 0 0 0 chr3R 3621150 3621189 -24283864 + AT_rich Low_complexity Low_complexity 1 39 0 4 612 234 105 0 0 chr3R 3628107 3628145 -24276908 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 612 21 0 0 0 chr3R 3628527 3628548 -24276505 + AT_rich Low_complexity Low_complexity 1 21 0 4 612 21 0 0 0 chr3R 3631630 3631651 -24273402 + AT_rich Low_complexity Low_complexity 1 21 0 4 612 26 64 0 0 chr3R 3631729 3631776 -24273277 + AT_rich Low_complexity Low_complexity 1 47 0 4 612 258 136 0 0 chr3R 3634922 3634966 -24270087 + (TCCG)n Simple_repeat Simple_repeat 4 47 0 4 612 26 0 0 0 chr3R 3635872 3635898 -24269155 + AT_rich Low_complexity Low_complexity 1 26 0 4 612 21 0 0 0 chr3R 3638390 3638411 -24266642 + AT_rich Low_complexity Low_complexity 1 21 0 4 612 216 67 0 0 chr3R 3640498 3640528 -24264525 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 612 2525 44 0 0 chr3R 3644928 3645226 -24259827 - Invader3_LTR LTR Gypsy 0 298 1 4 612 24 0 0 0 chr3R 3647511 3647535 -24257518 + AT_rich Low_complexity Low_complexity 1 24 0 4 612 31 26 0 0 chr3R 3649066 3649104 -24255949 + AT_rich Low_complexity Low_complexity 1 38 0 4 612 201 39 0 0 chr3R 3649390 3649416 -24255637 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 612 21 57 0 0 chr3R 3649840 3649875 -24255178 + AT_rich Low_complexity Low_complexity 1 35 0 4 612 28 0 0 0 chr3R 3651455 3651483 -24253570 + AT_rich Low_complexity Low_complexity 1 28 0 4 612 342 123 0 0 chr3R 3658499 3658556 -24246497 + (GCTG)n Simple_repeat Simple_repeat 3 59 0 4 612 212 0 36 0 chr3R 3659989 3660017 -24245036 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 4 612 24 32 0 0 chr3R 3660694 3660725 -24244328 + AT_rich Low_complexity Low_complexity 1 31 0 4 612 240 35 0 0 chr3R 3662989 3663018 -24242035 + (TA)n Simple_repeat Simple_repeat 1 29 0 4 612 554 164 136 48 chr3R 3664137 3664284 -24240769 - DNAREP1_DM LINE Penelope 0 594 435 4 612 33 43 0 0 chr3R 3669254 3669301 -24235752 + AT_rich Low_complexity Low_complexity 1 47 0 4 612 24 32 0 0 chr3R 3669337 3669368 -24235685 + AT_rich Low_complexity Low_complexity 1 31 0 4 613 23 54 0 0 chr3R 3670405 3670442 -24234611 + AT_rich Low_complexity Low_complexity 1 37 0 4 613 219 275 0 0 chr3R 3671797 3671866 -24233187 + GA-rich Low_complexity Low_complexity 1 69 0 4 613 202 159 22 22 chr3R 3673053 3673098 -24231955 + (CAAAC)n Simple_repeat Simple_repeat 2 46 0 4 613 25 0 0 0 chr3R 3675354 3675379 -24229674 + AT_rich Low_complexity Low_complexity 1 25 0 4 613 9579 21 1 3 chr3R 3675421 3676528 -24228525 - PROTOP_A DNA P 0 1105 1 4 613 26 0 0 0 chr3R 3680348 3680374 -24224679 + AT_rich Low_complexity Low_complexity 1 26 0 4 613 22 0 0 0 chr3R 3681610 3681632 -24223421 + AT_rich Low_complexity Low_complexity 1 22 0 4 613 21 0 0 0 chr3R 3682364 3682385 -24222668 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 210 37 0 0 chr3R 3684480 3684507 -24220546 + (CATATA)n Simple_repeat Simple_repeat 4 30 0 4 613 31 26 0 0 chr3R 3685503 3685541 -24219512 + AT_rich Low_complexity Low_complexity 1 38 0 4 613 255 31 0 0 chr3R 3686656 3686688 -24218365 + (T)n Simple_repeat Simple_repeat 1 32 0 4 613 241 184 0 64 chr3R 3686952 3687062 -24217991 - ROO_I LTR Pao -7513 743 641 4 613 192 152 0 0 chr3R 3687200 3687233 -24217820 + (TTG)n Simple_repeat Simple_repeat 1 33 0 4 613 27 62 0 0 chr3R 3692091 3692139 -24212914 + AT_rich Low_complexity Low_complexity 1 48 0 4 613 206 121 0 0 chr3R 3693372 3693405 -24211648 + (T)n Simple_repeat Simple_repeat 1 33 0 4 613 234 244 0 58 chr3R 3694098 3694185 -24210868 + GA-rich Low_complexity Low_complexity 4 85 0 4 613 21 57 0 0 chr3R 3694602 3694637 -24210416 + AT_rich Low_complexity Low_complexity 1 35 0 4 613 24 0 0 0 chr3R 3698102 3698126 -24206927 + AT_rich Low_complexity Low_complexity 1 24 0 4 613 21 0 0 0 chr3R 3699314 3699335 -24205718 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 21 0 0 0 chr3R 3701048 3701069 -24203984 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 356 195 0 61 chr3R 3702434 3702516 -24202537 + DNAREP1_DM LINE Penelope 420 496 -98 4 613 22 0 0 0 chr3R 3709016 3709038 -24196015 + AT_rich Low_complexity Low_complexity 1 22 0 4 613 210 71 0 0 chr3R 3712343 3712371 -24192682 + (CTG)n Simple_repeat Simple_repeat 3 30 0 4 613 23 33 0 0 chr3R 3718521 3718551 -24186502 + AT_rich Low_complexity Low_complexity 1 30 0 4 613 23 33 0 0 chr3R 3719239 3719269 -24185784 + AT_rich Low_complexity Low_complexity 1 30 0 4 613 23 54 0 0 chr3R 3719293 3719330 -24185723 + AT_rich Low_complexity Low_complexity 1 37 0 4 613 324 171 0 0 chr3R 3721848 3721930 -24183123 + (CATCC)n Simple_repeat Simple_repeat 4 85 0 4 613 31 26 0 0 chr3R 3728462 3728500 -24176553 + AT_rich Low_complexity Low_complexity 1 38 0 4 613 35 63 0 0 chr3R 3728648 3728711 -24176342 + AT_rich Low_complexity Low_complexity 1 63 0 4 613 23 54 0 0 chr3R 3729110 3729147 -24175906 + AT_rich Low_complexity Low_complexity 1 37 0 4 613 216 207 17 33 chr3R 3737281 3737341 -24167712 + (CTG)n Simple_repeat Simple_repeat 1 59 0 4 613 21 0 0 0 chr3R 3737717 3737738 -24167315 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 21 0 0 0 chr3R 3737826 3737847 -24167206 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 255 125 0 0 chr3R 3739407 3739447 -24165606 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 613 22 80 0 0 chr3R 3740451 3740501 -24164552 + AT_rich Low_complexity Low_complexity 1 50 0 4 613 294 233 150 126 chr3R 3741065 3741232 -24163821 - DNAREP1_DM LINE Penelope -40 554 384 4 613 323 212 128 34 chr3R 3741426 3741543 -24163510 - DNAREP1_DM LINE Penelope -109 485 358 4 613 325 211 0 27 chr3R 3741549 3741622 -24163431 - DNAREP1_DM LINE Penelope -523 71 1 4 613 204 267 0 0 chr3R 3752178 3752223 -24152830 + (CTCGG)n Simple_repeat Simple_repeat 4 48 0 4 613 282 73 0 0 chr3R 3752238 3752279 -24152774 + (TCCA)n Simple_repeat Simple_repeat 4 44 0 4 613 201 74 0 0 chr3R 3758643 3758670 -24146383 + (AGCTG)n Simple_repeat Simple_repeat 1 27 0 4 613 201 74 0 0 chr3R 3758670 3758696 -24146357 + (GGCTG)n Simple_repeat Simple_repeat 3 29 0 4 613 21 0 0 0 chr3R 3759689 3759710 -24145343 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 27 29 0 0 chr3R 3762247 3762281 -24142772 + AT_rich Low_complexity Low_complexity 1 34 0 4 613 213 145 48 0 chr3R 3762628 3762690 -24142363 + (CAA)n Simple_repeat Simple_repeat 1 65 0 4 613 256 256 23 11 chr3R 3762782 3762869 -24142184 + (CTG)n Simple_repeat Simple_repeat 3 90 0 4 613 294 180 0 0 chr3R 3764409 3764470 -24140583 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 613 22 0 0 0 chr3R 3768820 3768842 -24136211 + AT_rich Low_complexity Low_complexity 1 22 0 4 613 243 61 0 0 chr3R 3770542 3770575 -24134478 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 613 21 89 0 0 chr3R 3774663 3774719 -24130334 + AT_rich Low_complexity Low_complexity 1 56 0 4 613 21 0 0 0 chr3R 3775179 3775200 -24129853 + AT_rich Low_complexity Low_complexity 1 21 0 4 613 324 70 0 0 chr3R 3775282 3775325 -24129728 + (ATG)n Simple_repeat Simple_repeat 2 44 0 4 613 29 70 0 0 chr3R 3775525 3775582 -24129471 + AT_rich Low_complexity Low_complexity 1 57 0 4 613 244 400 0 0 chr3R 3775925 3776000 -24129053 + C-rich Low_complexity Low_complexity 1 75 0 4 613 32 75 0 0 chr3R 3778965 3779032 -24126021 + AT_rich Low_complexity Low_complexity 1 67 0 4 613 27 0 0 0 chr3R 3780514 3780541 -24124512 + AT_rich Low_complexity Low_complexity 1 27 0 4 613 24 0 0 0 chr3R 3784276 3784300 -24120753 + AT_rich Low_complexity Low_complexity 1 24 0 4 613 500 161 115 0 chr3R 3785121 3785208 -24119845 - DNAREP1_DM LINE Penelope -107 487 391 4 613 195 69 0 0 chr3R 3785865 3785894 -24119159 + (TGG)n Simple_repeat Simple_repeat 1 29 0 4 613 24 32 0 0 chr3R 3787611 3787642 -24117411 + AT_rich Low_complexity Low_complexity 1 31 0 4 613 28 0 0 0 chr3R 3788810 3788838 -24116215 + AT_rich Low_complexity Low_complexity 1 28 0 4 613 216 170 21 21 chr3R 3789866 3789914 -24115139 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 613 25 0 0 0 chr3R 3794303 3794328 -24110725 + AT_rich Low_complexity Low_complexity 1 25 0 4 613 24 32 0 0 chr3R 3797340 3797371 -24107682 + AT_rich Low_complexity Low_complexity 1 31 0 4 613 22 56 0 0 chr3R 3797766 3797802 -24107251 + AT_rich Low_complexity Low_complexity 1 36 0 4 613 255 114 0 0 chr3R 3798248 3798292 -24106761 + (ATG)n Simple_repeat Simple_repeat 3 46 0 4 613 21 82 0 0 chr3R 3799016 3799065 -24105988 + AT_rich Low_complexity Low_complexity 1 49 0 4 613 6275 24 8 3 chr3R 3799092 3800094 -24104959 - PROTOP_A DNA P 0 1105 1 4 613 22 35 0 0 chr3R 3800722 3800751 -24104302 + AT_rich Low_complexity Low_complexity 1 29 0 4 614 26 50 0 0 chr3R 3802148 3802188 -24102865 + AT_rich Low_complexity Low_complexity 1 40 0 4 614 295 293 12 0 chr3R 3802293 3802375 -24102678 + (CATATA)n Simple_repeat Simple_repeat 2 84 0 4 614 304 259 98 49 chr3R 3806854 3806976 -24098077 - DNAREP1_DM LINE Penelope -155 439 312 4 614 22 35 0 0 chr3R 3807174 3807203 -24097850 + AT_rich Low_complexity Low_complexity 1 29 0 4 614 21 0 0 0 chr3R 3807552 3807573 -24097480 + AT_rich Low_complexity Low_complexity 1 21 0 4 614 195 42 0 0 chr3R 3808063 3808087 -24096966 + (GCTG)n Simple_repeat Simple_repeat 3 26 0 4 614 211 220 0 20 chr3R 3810398 3810449 -24094604 + (TTCTG)n Simple_repeat Simple_repeat 3 52 0 4 614 294 29 0 0 chr3R 3814844 3814879 -24090174 + (CAG)n Simple_repeat Simple_repeat 1 35 0 4 614 21 0 0 0 chr3R 3815597 3815618 -24089435 + AT_rich Low_complexity Low_complexity 1 21 0 4 614 200 86 29 0 chr3R 3817643 3817678 -24087375 + (CTG)n Simple_repeat Simple_repeat 3 38 0 4 614 25 65 0 0 chr3R 3818715 3818761 -24086292 + AT_rich Low_complexity Low_complexity 1 46 0 4 614 21 36 0 0 chr3R 3818854 3818882 -24086171 + AT_rich Low_complexity Low_complexity 1 28 0 4 614 297 0 0 0 chr3R 3819470 3819503 -24085550 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 614 231 36 0 0 chr3R 3820008 3820036 -24085017 + (T)n Simple_repeat Simple_repeat 1 28 0 4 614 30 0 0 0 chr3R 3820870 3820900 -24084153 + AT_rich Low_complexity Low_complexity 1 30 0 4 614 24 32 0 0 chr3R 3821214 3821245 -24083808 + AT_rich Low_complexity Low_complexity 1 31 0 4 614 185 149 0 41 chr3R 3821439 3821488 -24083565 + (CTG)n Simple_repeat Simple_repeat 2 48 0 4 614 243 0 0 0 chr3R 3822078 3822105 -24082948 + (CAAAT)n Simple_repeat Simple_repeat 1 27 0 4 614 23 0 0 0 chr3R 3825378 3825401 -24079652 + AT_rich Low_complexity Low_complexity 1 23 0 4 614 21 0 0 0 chr3R 3827189 3827210 -24077843 + AT_rich Low_complexity Low_complexity 1 21 0 4 614 29 0 0 0 chr3R 3831878 3831907 -24073146 + AT_rich Low_complexity Low_complexity 1 29 0 4 614 25 0 0 0 chr3R 3832697 3832722 -24072331 + AT_rich Low_complexity Low_complexity 1 25 0 4 614 229 218 18 0 chr3R 3835962 3836017 -24069036 + (CAG)n Simple_repeat Simple_repeat 3 58 0 4 614 203 158 0 0 chr3R 3838087 3838125 -24066928 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 614 24 32 0 0 chr3R 3840698 3840729 -24064324 + AT_rich Low_complexity Low_complexity 1 31 0 4 614 28 0 0 0 chr3R 3843188 3843216 -24061837 + AT_rich Low_complexity Low_complexity 1 28 0 4 614 228 179 0 0 chr3R 3843598 3843637 -24061416 + DNAREP1_DM LINE Penelope 13 51 -543 4 614 386 232 141 0 chr3R 3843644 3843743 -24061310 + DNAREP1_DM LINE Penelope 439 551 -43 4 614 54 29 0 0 chr3R 3853069 3853137 -24051916 + AT_rich Low_complexity Low_complexity 1 68 0 4 614 204 217 0 0 chr3R 3855298 3855344 -24049709 + (TCTCTG)n Simple_repeat Simple_repeat 1 46 0 4 614 21 57 0 0 chr3R 3857438 3857473 -24047580 + AT_rich Low_complexity Low_complexity 1 35 0 4 614 25 0 0 0 chr3R 3864906 3864931 -24040122 + AT_rich Low_complexity Low_complexity 1 25 0 4 614 25 0 0 0 chr3R 3866456 3866481 -24038572 + AT_rich Low_complexity Low_complexity 1 25 0 4 614 26 0 0 0 chr3R 3868409 3868435 -24036618 + AT_rich Low_complexity Low_complexity 1 26 0 4 614 2131 34 45 11 chr3R 3868435 3868704 -24036349 - DMCR1A LINE CR1 0 4470 4193 4 614 6564 32 70 5 chr3R 3868700 3869511 -24035542 - DMCR1A LINE CR1 -607 3863 3000 4 614 207 0 0 0 chr3R 3869565 3869588 -24035465 + (T)n Simple_repeat Simple_repeat 1 23 0 4 614 47277 5 1 1 chr3R 3869588 3874710 -24030343 - BS LINE Jockey 0 5126 8 4 614 203 224 0 33 chr3R 3879194 3879254 -24025799 + T-rich Low_complexity Low_complexity 1 58 0 4 614 213 231 0 0 chr3R 3887278 3887330 -24017723 + T-rich Low_complexity Low_complexity 1 52 0 4 614 276 30 0 0 chr3R 3890983 3891016 -24014037 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 614 246 229 0 0 chr3R 3895101 3895149 -24009904 + (CAT)n Simple_repeat Simple_repeat 1 48 0 4 614 342 80 0 0 chr3R 3896661 3896711 -24008342 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 614 24 32 0 0 chr3R 3900178 3900209 -24004844 + AT_rich Low_complexity Low_complexity 1 31 0 4 614 407 19 0 19 chr3R 3901856 3901909 -24003144 + (CAG)n Simple_repeat Simple_repeat 3 54 0 4 614 186 133 0 0 chr3R 3903183 3903213 -24001840 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 614 21 0 0 0 chr3R 3903823 3903844 -24001209 + AT_rich Low_complexity Low_complexity 1 21 0 4 614 26 0 0 0 chr3R 3904638 3904664 -24000389 + AT_rich Low_complexity Low_complexity 1 26 0 4 614 237 213 33 0 chr3R 3907332 3907393 -23997660 + XDMR_DM Unknown Unknown 147 209 -151 4 614 255 253 129 24 chr3R 3907394 3907564 -23997489 - SAR_DM Satellite Satellite -1059 413 226 4 614 228 230 26 26 chr3R 3907499 3907575 -23997478 + XDMR Unknown Unknown 66 141 -220 4 614 274 247 84 44 chr3R 3907594 3907729 -23997324 + XDMR Unknown Unknown 1 176 -185 4 614 220 106 57 34 chr3R 3907756 3907844 -23997209 + (TA)n Simple_repeat Simple_repeat 1 90 0 4 614 22 35 0 0 chr3R 3908890 3908919 -23996134 + AT_rich Low_complexity Low_complexity 1 29 0 4 614 214 158 0 0 chr3R 3909912 3909950 -23995103 + (CCA)n Simple_repeat Simple_repeat 1 38 0 4 614 200 200 0 0 chr3R 3909996 3910046 -23995007 + (CCA)n Simple_repeat Simple_repeat 1 50 0 4 614 228 360 0 0 chr3R 3910494 3910594 -23994459 + (CCCGAA)n Simple_repeat Simple_repeat 2 101 0 4 614 3600 7 7 7 chr3R 3916314 3916728 -23988325 - DM297_LTR LTR Gypsy 0 414 1 4 614 8382 8 1 0 chr3R 3916728 3917703 -23987350 - DM297_I LTR Gypsy 0 6167 5192 4 614 14329 6 1 1 chr3R 3917682 3919320 -23985733 - DM297_I LTR Gypsy -4529 1638 1 4 614 3600 7 7 7 chr3R 3919320 3919734 -23985319 - DM297_LTR LTR Gypsy 0 414 1 4 614 180 111 0 0 chr3R 3919736 3919763 -23985290 + (CATA)n Simple_repeat Simple_repeat 2 28 0 4 614 3075 3 0 0 chr3R 3920184 3920514 -23984539 + TRANSPAC_LTR LTR Gypsy 1 330 0 4 614 41466 2 0 0 chr3R 3920514 3925103 -23979950 + TRANSPAC_I LTR Gypsy 1 4590 0 4 614 3075 3 0 0 chr3R 3925102 3925432 -23979621 + TRANSPAC_LTR LTR Gypsy 1 330 0 4 614 27698 3 0 1 chr3R 3927536 3930567 -23974486 - G2_DM LINE Jockey -9 3093 66 4 614 185 0 40 0 chr3R 3930787 3930812 -23974241 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 4 614 211 194 0 43 chr3R 3931608 3931678 -23973375 + (CAA)n Simple_repeat Simple_repeat 1 67 0 4 615 22 0 0 0 chr3R 3932569 3932591 -23972462 + AT_rich Low_complexity Low_complexity 1 22 0 4 615 211 292 0 0 chr3R 3935009 3935057 -23969996 + (TATG)n Simple_repeat Simple_repeat 3 50 0 4 615 219 36 0 0 chr3R 3936657 3936685 -23968368 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 615 196 140 19 39 chr3R 3939293 3939345 -23965708 + (TGGG)n Simple_repeat Simple_repeat 3 53 0 4 615 21 36 0 0 chr3R 3942589 3942617 -23962436 + AT_rich Low_complexity Low_complexity 1 28 0 4 615 195 42 0 0 chr3R 3944040 3944064 -23960989 + (CGGAA)n Simple_repeat Simple_repeat 5 28 0 4 615 31 88 0 0 chr3R 3945310 3945390 -23959663 + AT_rich Low_complexity Low_complexity 1 80 0 4 615 209 209 0 0 chr3R 3945584 3945627 -23959426 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 615 26 30 0 0 chr3R 3951988 3952021 -23953032 + AT_rich Low_complexity Low_complexity 1 33 0 4 615 32 57 0 0 chr3R 3954154 3954207 -23950846 + AT_rich Low_complexity Low_complexity 1 53 0 4 615 223 228 32 25 chr3R 3956194 3956287 -23948766 + A-rich Low_complexity Low_complexity 1 93 0 4 615 192 77 0 0 chr3R 3957911 3957937 -23947116 + (T)n Simple_repeat Simple_repeat 1 26 0 4 615 21 0 0 0 chr3R 3959947 3959968 -23945085 + AT_rich Low_complexity Low_complexity 1 21 0 4 615 39 0 0 0 chr3R 3960579 3960618 -23944435 + AT_rich Low_complexity Low_complexity 1 39 0 4 615 25 51 0 0 chr3R 3962314 3962353 -23942700 + AT_rich Low_complexity Low_complexity 1 39 0 4 615 25 0 0 0 chr3R 3963103 3963128 -23941925 + AT_rich Low_complexity Low_complexity 1 25 0 4 615 225 0 0 0 chr3R 3964124 3964149 -23940904 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 615 26 0 0 0 chr3R 3966039 3966065 -23938988 + AT_rich Low_complexity Low_complexity 1 26 0 4 615 213 186 17 17 chr3R 3966128 3966188 -23938865 + A-rich Low_complexity Low_complexity 5 64 0 4 615 22 0 0 0 chr3R 3966542 3966564 -23938489 + AT_rich Low_complexity Low_complexity 1 22 0 4 615 244 198 34 23 chr3R 3973073 3973161 -23931892 + T-rich Low_complexity Low_complexity 2 90 0 4 615 23 0 0 0 chr3R 3973518 3973541 -23931512 + AT_rich Low_complexity Low_complexity 1 23 0 4 615 186 43 0 0 chr3R 3977582 3977605 -23927448 + (GA)n Simple_repeat Simple_repeat 1 23 0 4 615 201 159 0 0 chr3R 3978082 3978126 -23926927 + A-rich Low_complexity Low_complexity 1 44 0 4 615 192 97 0 0 chr3R 3980146 3980177 -23924876 + (CTCTG)n Simple_repeat Simple_repeat 1 31 0 4 615 300 137 0 0 chr3R 3980235 3980286 -23924767 + (AGCTG)n Simple_repeat Simple_repeat 1 51 0 4 615 21 36 0 0 chr3R 3982323 3982351 -23922702 + AT_rich Low_complexity Low_complexity 1 28 0 4 615 216 0 0 0 chr3R 3983794 3983818 -23921235 + (A)n Simple_repeat Simple_repeat 1 24 0 4 615 234 62 0 0 chr3R 3989038 3989070 -23915983 + (CAG)n Simple_repeat Simple_repeat 3 34 0 4 615 26 30 0 0 chr3R 3989289 3989322 -23915731 + AT_rich Low_complexity Low_complexity 1 33 0 4 615 274 234 16 0 chr3R 3989559 3989623 -23915430 + (CCCGAA)n Simple_repeat Simple_repeat 6 70 0 4 615 180 0 0 0 chr3R 3990871 3990891 -23914162 + (T)n Simple_repeat Simple_repeat 1 20 0 4 615 244 197 0 26 chr3R 3991641 3991719 -23913334 + ROO_I LTR Pao 657 732 -7524 4 615 201 277 0 0 chr3R 3991761 3991808 -23913245 + (TTG)n Simple_repeat Simple_repeat 3 49 0 4 615 219 139 0 0 chr3R 3992814 3992850 -23912203 + (CCG)n Simple_repeat Simple_repeat 2 37 0 4 615 362 154 11 11 chr3R 3992969 3993061 -23911992 - ROO_I LTR Pao -7530 726 635 4 615 242 204 0 0 chr3R 3994758 3994807 -23910246 + (CAG)n Simple_repeat Simple_repeat 3 51 0 4 615 237 108 0 0 chr3R 3996331 3996368 -23908685 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 615 369 161 0 0 chr3R 3997656 3997743 -23907310 + (ACTG)n Simple_repeat Simple_repeat 3 89 0 4 615 25 31 0 0 chr3R 3998362 3998394 -23906659 + AT_rich Low_complexity Low_complexity 1 32 0 4 615 24 0 0 0 chr3R 3999144 3999168 -23905885 + AT_rich Low_complexity Low_complexity 1 24 0 4 615 225 151 57 0 chr3R 3999823 3999876 -23905177 - ROO_I LTR Pao -7539 717 662 4 615 338 115 16 0 chr3R 4000876 4000937 -23904116 + (CAG)n Simple_repeat Simple_repeat 1 62 0 4 615 22 0 0 0 chr3R 4002362 4002384 -23902669 + AT_rich Low_complexity Low_complexity 1 22 0 4 615 24 32 0 0 chr3R 4003803 4003834 -23901219 + AT_rich Low_complexity Low_complexity 1 31 0 4 615 195 42 0 0 chr3R 4005838 4005862 -23899191 + (TATAG)n Simple_repeat Simple_repeat 3 26 0 4 615 186 103 0 0 chr3R 4007269 4007298 -23897755 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 615 205 89 0 43 chr3R 4008849 4008896 -23896157 + (CAAAAA)n Simple_repeat Simple_repeat 2 46 0 4 615 207 0 0 0 chr3R 4013609 4013632 -23891421 + (TC)n Simple_repeat Simple_repeat 2 24 0 4 615 22 88 0 0 chr3R 4014488 4014545 -23890508 + AT_rich Low_complexity Low_complexity 1 57 0 4 615 237 33 0 0 chr3R 4015152 4015182 -23889871 + (CAGC)n Simple_repeat Simple_repeat 1 30 0 4 615 222 222 0 0 chr3R 4016483 4016528 -23888525 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 615 221 163 20 0 chr3R 4016876 4016925 -23888128 + (CTG)n Simple_repeat Simple_repeat 1 50 0 4 615 27 0 0 0 chr3R 4017705 4017732 -23887321 + AT_rich Low_complexity Low_complexity 1 27 0 4 615 21 57 0 0 chr3R 4017958 4017993 -23887060 + AT_rich Low_complexity Low_complexity 1 35 0 4 615 195 139 0 0 chr3R 4020844 4020880 -23884173 + (TTG)n Simple_repeat Simple_repeat 1 36 0 4 615 180 182 0 0 chr3R 4021864 4021908 -23883145 + CT-rich Low_complexity Low_complexity 2 45 0 4 615 255 152 0 0 chr3R 4025125 4025171 -23879882 + (ACCG)n Simple_repeat Simple_repeat 3 48 0 4 615 23 0 0 0 chr3R 4026298 4026321 -23878732 + AT_rich Low_complexity Low_complexity 1 23 0 4 615 24 32 0 0 chr3R 4027700 4027731 -23877322 + AT_rich Low_complexity Low_complexity 1 31 0 4 615 21 0 0 0 chr3R 4028292 4028313 -23876740 + AT_rich Low_complexity Low_complexity 1 21 0 4 615 203 184 0 0 chr3R 4028798 4028836 -23876217 + T-rich Low_complexity Low_complexity 1 38 0 4 615 7172 0 0 2 chr3R 4033333 4034119 -23870934 + FW_DM LINE Jockey 3905 4688 -4 4 615 228 235 0 0 chr3R 4034771 4034822 -23870231 + CT-rich Low_complexity Low_complexity 1 51 0 4 615 198 103 0 0 chr3R 4035676 4035705 -23869348 + (CAAAG)n Simple_repeat Simple_repeat 1 29 0 4 615 204 143 0 0 chr3R 4040074 4040116 -23864937 + (TTGG)n Simple_repeat Simple_repeat 3 44 0 4 615 205 152 0 0 chr3R 4040134 4040167 -23864886 + (TCG)n Simple_repeat Simple_repeat 3 35 0 4 615 21 71 0 0 chr3R 4042420 4042462 -23862591 + AT_rich Low_complexity Low_complexity 1 42 0 4 615 246 116 0 0 chr3R 4048795 4048838 -23856215 + (TTG)n Simple_repeat Simple_repeat 1 43 0 4 615 231 305 0 0 chr3R 4048981 4049063 -23855990 + GA-rich Low_complexity Low_complexity 2 83 0 4 615 26 0 0 0 chr3R 4050003 4050029 -23855024 + AT_rich Low_complexity Low_complexity 1 26 0 4 615 186 43 0 0 chr3R 4050246 4050269 -23854784 + (GATTG)n Simple_repeat Simple_repeat 5 27 0 4 615 423 221 0 0 chr3R 4050560 4050687 -23854366 + (CAGT)n Simple_repeat Simple_repeat 1 127 0 4 615 204 135 0 0 chr3R 4051592 4051629 -23853424 + (TGG)n Simple_repeat Simple_repeat 2 38 0 4 615 25 51 0 0 chr3R 4051854 4051893 -23853160 + AT_rich Low_complexity Low_complexity 1 39 0 4 615 22 0 0 0 chr3R 4057174 4057196 -23847857 + AT_rich Low_complexity Low_complexity 1 22 0 4 615 499 128 224 30 chr3R 4058567 4058710 -23846343 + DNAREP1_DM LINE Penelope 245 415 -179 4 615 468 160 0 0 chr3R 4058726 4058801 -23846252 + DNAREP1_DM LINE Penelope 500 574 -20 4 616 25 0 0 0 chr3R 4064334 4064359 -23840694 + AT_rich Low_complexity Low_complexity 1 25 0 4 616 387 160 92 24 chr3R 4065644 4065822 -23839231 + TC1-2_DM DNA Tc1 1397 1627 -17 4 616 21 36 0 0 chr3R 4066488 4066516 -23838537 + AT_rich Low_complexity Low_complexity 1 28 0 4 616 37 52 0 0 chr3R 4066529 4066587 -23838466 + AT_rich Low_complexity Low_complexity 1 58 0 4 616 21 0 0 0 chr3R 4068889 4068910 -23836143 + AT_rich Low_complexity Low_complexity 1 21 0 4 616 21 0 0 0 chr3R 4073537 4073558 -23831495 + AT_rich Low_complexity Low_complexity 1 21 0 4 616 230 81 27 0 chr3R 4073985 4074022 -23831031 + (TCTA)n Simple_repeat Simple_repeat 3 40 0 4 616 229 292 15 0 chr3R 4077358 4077423 -23827630 + (CCG)n Simple_repeat Simple_repeat 2 67 0 4 616 22 70 0 0 chr3R 4077636 4077679 -23827374 + AT_rich Low_complexity Low_complexity 1 43 0 4 616 202 214 0 0 chr3R 4081668 4081710 -23823343 + (ATG)n Simple_repeat Simple_repeat 3 44 0 4 616 23 54 0 0 chr3R 4083782 4083819 -23821234 + AT_rich Low_complexity Low_complexity 1 37 0 4 616 232 171 22 109 chr3R 4084364 4084456 -23820597 + ROO_I LTR Pao 649 732 -7524 4 616 192 77 0 0 chr3R 4084484 4084510 -23820543 + (CAA)n Simple_repeat Simple_repeat 1 26 0 4 616 22 0 0 0 chr3R 4084729 4084751 -23820302 + AT_rich Low_complexity Low_complexity 1 22 0 4 616 22 0 0 0 chr3R 4086513 4086535 -23818518 + AT_rich Low_complexity Low_complexity 1 22 0 4 616 706 117 0 19 chr3R 4087368 4087473 -23817580 - PROTOP_B DNA P -1022 131 29 4 616 21 0 0 0 chr3R 4087938 4087959 -23817094 + AT_rich Low_complexity Low_complexity 1 21 0 4 616 24 0 0 0 chr3R 4090533 4090557 -23814496 + AT_rich Low_complexity Low_complexity 1 24 0 4 616 186 174 0 0 chr3R 4098106 4098152 -23806901 + A-rich Low_complexity Low_complexity 1 46 0 4 616 223 194 16 31 chr3R 4105633 4105697 -23799356 + (TATAA)n Simple_repeat Simple_repeat 2 64 0 4 616 28 0 0 0 chr3R 4105744 4105772 -23799281 + AT_rich Low_complexity Low_complexity 1 28 0 4 616 252 59 0 0 chr3R 4105882 4105916 -23799137 + (CAGT)n Simple_repeat Simple_repeat 1 34 0 4 616 242 272 12 12 chr3R 4106745 4106827 -23798226 + (CAG)n Simple_repeat Simple_repeat 1 82 0 4 616 29 47 0 0 chr3R 4111430 4111473 -23793580 + AT_rich Low_complexity Low_complexity 1 43 0 4 616 27 0 0 0 chr3R 4112473 4112500 -23792553 + AT_rich Low_complexity Low_complexity 1 27 0 4 616 24 53 0 0 chr3R 4119560 4119598 -23785455 + AT_rich Low_complexity Low_complexity 1 38 0 4 616 252 59 0 0 chr3R 4125766 4125800 -23779253 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 616 239 194 0 29 chr3R 4126275 4126344 -23778709 + (TGGA)n Simple_repeat Simple_repeat 1 67 0 4 616 25 31 0 0 chr3R 4131831 4131863 -23773190 + AT_rich Low_complexity Low_complexity 1 32 0 4 616 306 0 0 0 chr3R 4134565 4134599 -23770454 + (GA)n Simple_repeat Simple_repeat 2 35 0 4 616 24 32 0 0 chr3R 4138780 4138811 -23766242 + AT_rich Low_complexity Low_complexity 1 31 0 4 616 189 0 0 0 chr3R 4149045 4149066 -23755987 + (TCC)n Simple_repeat Simple_repeat 2 22 0 4 616 23 0 0 0 chr3R 4153510 4153533 -23751520 + AT_rich Low_complexity Low_complexity 1 23 0 4 616 28 0 0 0 chr3R 4154669 4154697 -23750356 + AT_rich Low_complexity Low_complexity 1 28 0 4 616 25 0 0 0 chr3R 4155361 4155386 -23749667 + AT_rich Low_complexity Low_complexity 1 25 0 4 616 213 39 0 0 chr3R 4158400 4158426 -23746627 + (A)n Simple_repeat Simple_repeat 1 26 0 4 616 24 0 0 0 chr3R 4159943 4159967 -23745086 + AT_rich Low_complexity Low_complexity 1 24 0 4 616 215 238 0 60 chr3R 4160390 4160457 -23744596 + GA-rich Low_complexity Low_complexity 6 68 0 4 616 41 21 0 0 chr3R 4161115 4161163 -23743890 + AT_rich Low_complexity Low_complexity 1 48 0 4 616 21 57 0 0 chr3R 4161192 4161227 -23743826 + AT_rich Low_complexity Low_complexity 1 35 0 4 616 26 0 0 0 chr3R 4173138 4173164 -23731889 + AT_rich Low_complexity Low_complexity 1 26 0 4 616 23 0 0 0 chr3R 4174997 4175020 -23730033 + AT_rich Low_complexity Low_complexity 1 23 0 4 616 207 0 0 0 chr3R 4177887 4177910 -23727143 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 616 183 42 0 0 chr3R 4178105 4178129 -23726924 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 4 616 336 77 0 44 chr3R 4179528 4179596 -23725457 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 616 214 175 0 0 chr3R 4183484 4183524 -23721529 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 616 31 26 0 0 chr3R 4185691 4185729 -23719324 + AT_rich Low_complexity Low_complexity 1 38 0 4 616 21 0 0 0 chr3R 4186465 4186486 -23718567 + AT_rich Low_complexity Low_complexity 1 21 0 4 616 29 47 0 0 chr3R 4188395 4188438 -23716615 + AT_rich Low_complexity Low_complexity 1 43 0 4 616 254 303 0 0 chr3R 4191692 4191791 -23713262 + (CTG)n Simple_repeat Simple_repeat 3 101 0 4 616 221 140 0 17 chr3R 4192189 4192247 -23712806 + (TTG)n Simple_repeat Simple_repeat 3 59 0 4 616 285 118 0 0 chr3R 4193592 4193643 -23711410 + (CTG)n Simple_repeat Simple_repeat 3 53 0 4 616 292 271 23 15 chr3R 4193722 4193853 -23711200 + (CTG)n Simple_repeat Simple_repeat 3 134 0 4 616 249 180 0 0 chr3R 4194131 4194181 -23710872 + (CTG)n Simple_repeat Simple_repeat 3 52 0 4 617 189 147 0 0 chr3R 4195368 4195402 -23709651 + (CACG)n Simple_repeat Simple_repeat 2 35 0 4 617 192 77 0 0 chr3R 4199424 4199450 -23705603 + (CTG)n Simple_repeat Simple_repeat 3 28 0 4 617 26 30 0 0 chr3R 4200458 4200491 -23704562 + AT_rich Low_complexity Low_complexity 1 33 0 4 617 24 0 0 0 chr3R 4202315 4202339 -23702714 + AT_rich Low_complexity Low_complexity 1 24 0 4 617 209 108 27 0 chr3R 4202559 4202596 -23702457 + (CGAA)n Simple_repeat Simple_repeat 1 38 0 4 617 266 0 29 0 chr3R 4202900 4202934 -23702119 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 617 233 75 0 24 chr3R 4202936 4202977 -23702076 + (GA)n Simple_repeat Simple_repeat 2 41 0 4 617 186 191 0 0 chr3R 4206137 4206179 -23698874 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 617 373 265 17 8 chr3R 4207606 4207724 -23697329 + A-rich Low_complexity Low_complexity 6 124 0 4 617 183 114 0 0 chr3R 4207956 4207991 -23697062 + (T)n Simple_repeat Simple_repeat 1 35 0 4 617 189 0 0 0 chr3R 4208233 4208254 -23696799 + (TA)n Simple_repeat Simple_repeat 2 22 0 4 617 195 42 0 0 chr3R 4211026 4211050 -23694003 + (CTG)n Simple_repeat Simple_repeat 1 24 0 4 617 180 0 0 0 chr3R 4211246 4211266 -23693787 + (CTG)n Simple_repeat Simple_repeat 1 20 0 4 617 315 234 64 0 chr3R 4211418 4211512 -23693541 - ROO_I LTR Pao -7517 739 640 4 617 249 119 0 0 chr3R 4214155 4214197 -23690856 + (TTTTTG)n Simple_repeat Simple_repeat 5 46 0 4 617 386 38 0 19 chr3R 4214378 4214431 -23690622 + (CTG)n Simple_repeat Simple_repeat 1 52 0 4 617 180 97 0 0 chr3R 4215646 4215677 -23689376 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 617 221 238 0 60 chr3R 4223840 4223907 -23681146 + (CAGAGA)n Simple_repeat Simple_repeat 5 67 0 4 617 25 31 0 0 chr3R 4227940 4227972 -23677081 + AT_rich Low_complexity Low_complexity 1 32 0 4 617 240 35 0 0 chr3R 4228294 4228323 -23676730 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 617 4017 0 0 0 chr3R 4228784 4229212 -23675841 + ROO_LTR LTR Pao 1 428 0 4 617 74822 1 1 0 chr3R 4229212 4237464 -23667589 + ROO_I LTR Pao 1 8256 0 4 617 4017 0 0 0 chr3R 4237464 4237892 -23667161 + ROO_LTR LTR Pao 1 428 0 4 617 25 0 0 0 chr3R 4239388 4239413 -23665640 + AT_rich Low_complexity Low_complexity 1 25 0 4 617 378 115 0 0 chr3R 4239766 4239827 -23665226 + (TC)n Simple_repeat Simple_repeat 2 62 0 4 617 217 242 15 29 chr3R 4240346 4240414 -23664639 + C-rich Low_complexity Low_complexity 3 69 0 4 617 260 152 15 0 chr3R 4240940 4241006 -23664047 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 617 183 139 0 0 chr3R 4242248 4242284 -23662769 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 617 200 149 21 0 chr3R 4243247 4243294 -23661759 + (ACTG)n Simple_repeat Simple_repeat 4 51 0 4 617 21 0 0 0 chr3R 4246406 4246427 -23658626 + AT_rich Low_complexity Low_complexity 1 21 0 4 617 209 128 0 25 chr3R 4251311 4251351 -23653702 + (TTAAA)n Simple_repeat Simple_repeat 1 39 0 4 617 225 65 0 0 chr3R 4253485 4253516 -23651537 + (TCG)n Simple_repeat Simple_repeat 3 33 0 4 617 30 69 0 0 chr3R 4253729 4253787 -23651266 + AT_rich Low_complexity Low_complexity 1 58 0 4 617 189 147 0 0 chr3R 4254654 4254688 -23650365 + (CAGTT)n Simple_repeat Simple_repeat 3 36 0 4 617 207 0 0 0 chr3R 4256199 4256222 -23648831 + (CAG)n Simple_repeat Simple_repeat 1 23 0 4 617 189 0 0 0 chr3R 4256807 4256828 -23648225 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 617 273 264 11 22 chr3R 4260365 4260454 -23644599 + (TTG)n Simple_repeat Simple_repeat 3 90 0 4 617 201 74 0 0 chr3R 4262013 4262040 -23643013 + (TGG)n Simple_repeat Simple_repeat 3 29 0 4 617 321 26 0 0 chr3R 4262528 4262566 -23642487 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 617 28 48 0 0 chr3R 4265785 4265827 -23639226 + AT_rich Low_complexity Low_complexity 1 42 0 4 617 205 171 0 0 chr3R 4266070 4266105 -23638948 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 617 288 0 0 0 chr3R 4266452 4266484 -23638569 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 617 227 241 0 0 chr3R 4269167 4269250 -23635803 - ROO_I LTR Pao -7523 733 651 4 617 208 259 25 0 chr3R 4269791 4269872 -23635181 + T-rich Low_complexity Low_complexity 2 84 0 4 617 270 95 0 0 chr3R 4270931 4270973 -23634080 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 617 22 0 0 0 chr3R 4271422 4271444 -23633609 + AT_rich Low_complexity Low_complexity 1 22 0 4 617 23 33 0 0 chr3R 4271592 4271622 -23633431 + AT_rich Low_complexity Low_complexity 1 30 0 4 617 195 162 0 0 chr3R 4272399 4272436 -23632617 + (AGGTG)n Simple_repeat Simple_repeat 1 37 0 4 617 195 42 0 0 chr3R 4273309 4273333 -23631720 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 617 507 60 0 0 chr3R 4274839 4274906 -23630147 + (TGGA)n Simple_repeat Simple_repeat 3 69 0 4 617 195 42 0 0 chr3R 4275756 4275780 -23629273 + (T)n Simple_repeat Simple_repeat 1 24 0 4 617 201 154 0 0 chr3R 4276101 4276140 -23628913 + (GTATG)n Simple_repeat Simple_repeat 5 43 0 4 617 231 61 0 0 chr3R 4278248 4278281 -23626772 + (A)n Simple_repeat Simple_repeat 1 33 0 4 617 288 53 0 0 chr3R 4278834 4278872 -23626181 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 617 213 39 0 0 chr3R 4283106 4283132 -23621921 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 617 186 103 0 0 chr3R 4283436 4283465 -23621588 + (ATGGTG)n Simple_repeat Simple_repeat 4 32 0 4 617 191 0 103 0 chr3R 4286013 4286052 -23619001 + (TGG)n Simple_repeat Simple_repeat 2 44 0 4 617 243 0 0 0 chr3R 4287759 4287786 -23617267 + (CAG)n Simple_repeat Simple_repeat 3 29 0 4 617 31 26 0 0 chr3R 4287954 4287992 -23617061 + AT_rich Low_complexity Low_complexity 1 38 0 4 617 24 0 0 0 chr3R 4288969 4288993 -23616060 + AT_rich Low_complexity Low_complexity 1 24 0 4 617 24 0 0 0 chr3R 4289175 4289199 -23615854 + AT_rich Low_complexity Low_complexity 1 24 0 4 617 248 158 18 0 chr3R 4290711 4290768 -23614285 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 617 203 0 37 0 chr3R 4291004 4291031 -23614022 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 617 342 67 0 0 chr3R 4295327 4295372 -23609681 + (CAG)n Simple_repeat Simple_repeat 3 47 0 4 617 283 146 0 0 chr3R 4295883 4295938 -23609115 - ROO_I LTR Pao -7543 713 659 4 617 246 81 0 0 chr3R 4300026 4300063 -23604990 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 4 617 225 0 0 0 chr3R 4301161 4301186 -23603867 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 617 186 143 0 0 chr3R 4302959 4302994 -23602059 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 617 189 0 0 0 chr3R 4304368 4304389 -23600664 + (CAG)n Simple_repeat Simple_repeat 1 21 0 4 617 21 36 0 0 chr3R 4304568 4304596 -23600457 + AT_rich Low_complexity Low_complexity 1 28 0 4 617 183 80 0 0 chr3R 4304946 4304971 -23600082 + (CAA)n Simple_repeat Simple_repeat 2 26 0 4 617 180 0 0 0 chr3R 4307964 4307984 -23597069 + (TG)n Simple_repeat Simple_repeat 2 21 0 4 617 34 42 0 0 chr3R 4308139 4308187 -23596866 + AT_rich Low_complexity Low_complexity 1 48 0 4 617 235 219 0 0 chr3R 4310239 4310303 -23594750 + ROO_I LTR Pao 677 740 -7516 4 617 252 0 0 0 chr3R 4311288 4311316 -23593737 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 617 211 226 0 19 chr3R 4313649 4313703 -23591350 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 617 219 114 0 0 chr3R 4314136 4314171 -23590882 + (TTCGG)n Simple_repeat Simple_repeat 5 39 0 4 617 246 62 0 0 chr3R 4314832 4314864 -23590189 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 617 231 36 0 0 chr3R 4315369 4315397 -23589656 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 617 216 143 0 0 chr3R 4315644 4315686 -23589367 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 617 189 0 0 0 chr3R 4315939 4315960 -23589093 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 617 222 160 0 0 chr3R 4317007 4317057 -23587996 + (CAGAG)n Simple_repeat Simple_repeat 3 52 0 4 617 198 0 0 0 chr3R 4320021 4320043 -23585010 + (TCTCG)n Simple_repeat Simple_repeat 3 24 0 4 617 201 234 0 0 chr3R 4321589 4321636 -23583417 + (CAG)n Simple_repeat Simple_repeat 3 49 0 4 617 231 254 14 0 chr3R 4321906 4321977 -23583076 + (CCCA)n Simple_repeat Simple_repeat 1 72 0 4 617 216 0 0 0 chr3R 4323406 4323430 -23581623 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 617 209 204 0 0 chr3R 4324863 4324907 -23580146 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 618 21 0 0 0 chr3R 4326167 4326188 -23578865 + AT_rich Low_complexity Low_complexity 1 21 0 4 618 24 32 0 0 chr3R 4327100 4327131 -23577922 + AT_rich Low_complexity Low_complexity 1 31 0 4 618 21 0 0 0 chr3R 4327705 4327726 -23577327 + AT_rich Low_complexity Low_complexity 1 21 0 4 618 258 300 12 0 chr3R 4328291 4328371 -23576682 + (TG)n Simple_repeat Simple_repeat 2 82 0 4 618 25 0 0 0 chr3R 4329596 4329621 -23575432 + AT_rich Low_complexity Low_complexity 1 25 0 4 618 21 0 0 0 chr3R 4332139 4332160 -23572893 + AT_rich Low_complexity Low_complexity 1 21 0 4 618 22 0 0 0 chr3R 4339364 4339386 -23565667 + AT_rich Low_complexity Low_complexity 1 22 0 4 618 26 0 0 0 chr3R 4340290 4340316 -23564737 + AT_rich Low_complexity Low_complexity 1 26 0 4 618 450 248 98 32 chr3R 4340344 4340612 -23564441 + SAR_DM Satellite Satellite 1 285 -754 4 618 420 216 76 40 chr3R 4340492 4340690 -23564363 - XDMR Unknown Unknown -43 318 114 4 618 25 51 0 0 chr3R 4342712 4342751 -23562302 + AT_rich Low_complexity Low_complexity 1 39 0 4 618 25 0 0 0 chr3R 4347088 4347113 -23557940 + AT_rich Low_complexity Low_complexity 1 25 0 4 618 29 47 0 0 chr3R 4349248 4349291 -23555762 + AT_rich Low_complexity Low_complexity 1 43 0 4 618 22 0 0 0 chr3R 4352198 4352220 -23552833 + AT_rich Low_complexity Low_complexity 1 22 0 4 618 23 54 0 0 chr3R 4353816 4353853 -23551200 + AT_rich Low_complexity Low_complexity 1 37 0 4 618 23 33 0 0 chr3R 4356139 4356169 -23548884 + AT_rich Low_complexity Low_complexity 1 30 0 4 618 183 80 0 0 chr3R 4357120 4357145 -23547908 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 618 21 36 0 0 chr3R 4359447 4359475 -23545578 + AT_rich Low_complexity Low_complexity 1 28 0 4 618 32 0 0 0 chr3R 4359548 4359580 -23545473 + AT_rich Low_complexity Low_complexity 1 32 0 4 618 180 0 0 0 chr3R 4360239 4360259 -23544794 + (ATTTG)n Simple_repeat Simple_repeat 1 20 0 4 618 180 0 0 0 chr3R 4363491 4363511 -23541542 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 618 22 0 0 0 chr3R 4365016 4365038 -23540015 + AT_rich Low_complexity Low_complexity 1 22 0 4 618 239 228 0 17 chr3R 4368004 4368062 -23536991 + (CTG)n Simple_repeat Simple_repeat 3 59 0 4 618 216 0 0 0 chr3R 4368771 4368795 -23536258 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 618 198 118 0 0 chr3R 4370085 4370119 -23534934 + (T)n Simple_repeat Simple_repeat 1 34 0 4 618 233 169 0 33 chr3R 4371579 4371640 -23533413 + (CCCA)n Simple_repeat Simple_repeat 3 61 0 4 618 203 229 21 0 chr3R 4374452 4374500 -23530553 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 618 22 35 0 0 chr3R 4376898 4376927 -23528126 + AT_rich Low_complexity Low_complexity 1 29 0 4 618 249 108 0 0 chr3R 4377213 4377250 -23527803 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 618 32 26 0 0 chr3R 4379374 4379413 -23525640 + AT_rich Low_complexity Low_complexity 1 39 0 4 618 195 167 0 0 chr3R 4380546 4380588 -23524465 + A-rich Low_complexity Low_complexity 1 42 0 4 618 209 128 21 0 chr3R 4384092 4384139 -23520914 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 618 23 33 0 0 chr3R 4384426 4384456 -23520597 + AT_rich Low_complexity Low_complexity 1 30 0 4 618 24 0 0 0 chr3R 4394563 4394587 -23510466 + AT_rich Low_complexity Low_complexity 1 24 0 4 618 2316 8 0 0 chr3R 4396254 4396520 -23508533 - DMLTR5 LTR Gypsy 0 266 1 4 618 16623 1 0 0 chr3R 4396520 4398441 -23506612 - HMSBEAGLE_I LTR Gypsy 0 6529 4609 4 618 7819 0 0 0 chr3R 4398431 4399325 -23505728 - HMSBEAGLE_I LTR Gypsy -4064 2465 1572 4 618 2315 4 0 0 chr3R 4399321 4399598 -23505455 - HMSBEAGLE_I LTR Gypsy -5284 1245 969 4 618 974 29 52 12 chr3R 4399598 4399770 -23505283 + (TAA)n Simple_repeat Simple_repeat 1 179 0 4 618 6565 1 0 2 chr3R 4399770 4400568 -23504485 - HMSBEAGLE_I LTR Gypsy -5733 796 1 4 618 2316 8 0 0 chr3R 4400567 4400833 -23504220 - DMLTR5 LTR Gypsy 0 266 1 4 618 194 57 0 54 chr3R 4400971 4401008 -23504045 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 4 618 48 43 0 0 chr3R 4403492 4403561 -23501492 + AT_rich Low_complexity Low_complexity 1 69 0 4 618 27 0 0 0 chr3R 4404238 4404265 -23500788 + AT_rich Low_complexity Low_complexity 1 27 0 4 618 21 0 0 0 chr3R 4406412 4406433 -23498620 + AT_rich Low_complexity Low_complexity 1 21 0 4 618 38 0 0 0 chr3R 4407411 4407449 -23497604 + AT_rich Low_complexity Low_complexity 1 38 0 4 618 22 56 0 0 chr3R 4407737 4407773 -23497280 + AT_rich Low_complexity Low_complexity 1 36 0 4 618 189 175 0 0 chr3R 4408738 4408778 -23496275 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 618 192 77 0 0 chr3R 4409398 4409424 -23495629 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 618 205 211 0 0 chr3R 4413712 4413750 -23491303 + T-rich Low_complexity Low_complexity 1 38 0 4 618 21 0 0 0 chr3R 4415015 4415036 -23490017 + AT_rich Low_complexity Low_complexity 1 21 0 4 618 219 154 0 0 chr3R 4415171 4415210 -23489843 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 618 318 138 0 0 chr3R 4415437 4415495 -23489558 + (CAGT)n Simple_repeat Simple_repeat 4 61 0 4 618 25 31 0 0 chr3R 4419785 4419817 -23485236 + AT_rich Low_complexity Low_complexity 1 32 0 4 618 233 209 0 0 chr3R 4420643 4420686 -23484367 + (TTG)n Simple_repeat Simple_repeat 3 45 0 4 618 24 32 0 0 chr3R 4420814 4420845 -23484208 + AT_rich Low_complexity Low_complexity 1 31 0 4 618 208 195 48 12 chr3R 4420963 4421046 -23484007 + (TATAA)n Simple_repeat Simple_repeat 2 87 0 4 618 198 0 0 0 chr3R 4423178 4423200 -23481853 + (CAGAA)n Simple_repeat Simple_repeat 4 25 0 4 618 3766 0 0 0 chr3R 4427543 4427971 -23477082 - ROO_LTR LTR Pao 0 428 1 4 618 70207 1 2 0 chr3R 4427971 4436210 -23468843 - ROO_I LTR Pao 0 8256 1 4 618 3766 0 0 0 chr3R 4436210 4436638 -23468415 - ROO_LTR LTR Pao 0 428 1 4 618 183 80 0 0 chr3R 4438082 4438107 -23466946 + (CAGC)n Simple_repeat Simple_repeat 3 27 0 4 618 35 24 0 0 chr3R 4438788 4438830 -23466223 + AT_rich Low_complexity Low_complexity 1 42 0 4 618 214 200 0 0 chr3R 4440394 4440434 -23464619 + (ATG)n Simple_repeat Simple_repeat 1 40 0 4 618 213 132 0 0 chr3R 4441634 4441672 -23463381 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 618 180 0 0 0 chr3R 4442045 4442065 -23462988 + (ATAAG)n Simple_repeat Simple_repeat 3 22 0 4 618 243 175 53 0 chr3R 4443860 4443917 -23461136 + A-rich Low_complexity Low_complexity 2 61 0 4 618 22 0 0 0 chr3R 4446633 4446655 -23458398 + GC_rich Low_complexity Low_complexity 1 22 0 4 618 32 0 0 0 chr3R 4450808 4450840 -23454213 + AT_rich Low_complexity Low_complexity 1 32 0 4 618 21 36 0 0 chr3R 4455552 4455580 -23449473 + AT_rich Low_complexity Low_complexity 1 28 0 4 619 215 79 26 0 chr3R 4457560 4457598 -23447455 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 619 22 0 0 0 chr3R 4461840 4461862 -23443191 + AT_rich Low_complexity Low_complexity 1 22 0 4 619 24 32 0 0 chr3R 4463472 4463503 -23441550 + AT_rich Low_complexity Low_complexity 1 31 0 4 619 216 0 0 0 chr3R 4466595 4466619 -23438434 + (CAATT)n Simple_repeat Simple_repeat 2 25 0 4 619 30 59 0 0 chr3R 4468372 4468423 -23436630 + AT_rich Low_complexity Low_complexity 1 51 0 4 619 25 0 0 0 chr3R 4471637 4471662 -23433391 + AT_rich Low_complexity Low_complexity 1 25 0 4 619 21 0 0 0 chr3R 4473657 4473678 -23431375 + AT_rich Low_complexity Low_complexity 1 21 0 4 619 22 0 0 0 chr3R 4480772 4480794 -23424259 + AT_rich Low_complexity Low_complexity 1 22 0 4 619 381 129 0 0 chr3R 4480882 4480952 -23424101 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 619 183 42 0 0 chr3R 4481449 4481473 -23423580 + (CTG)n Simple_repeat Simple_repeat 1 24 0 4 619 226 300 0 0 chr3R 4481547 4481617 -23423436 + (CCG)n Simple_repeat Simple_repeat 2 71 0 4 619 265 316 9 9 chr3R 4483759 4483874 -23421179 + (CCG)n Simple_repeat Simple_repeat 3 117 0 4 619 21 71 0 0 chr3R 4491576 4491618 -23413435 + AT_rich Low_complexity Low_complexity 1 42 0 4 619 194 0 0 37 chr3R 4493475 4493502 -23411551 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 4 619 222 232 12 47 chr3R 4496182 4496268 -23408785 + (CATA)n Simple_repeat Simple_repeat 4 86 0 4 619 223 167 0 77 chr3R 4499531 4499622 -23405431 + (CTTTG)n Simple_repeat Simple_repeat 5 88 0 4 619 28 0 0 0 chr3R 4499674 4499702 -23405351 + AT_rich Low_complexity Low_complexity 1 28 0 4 619 27 49 0 0 chr3R 4499715 4499756 -23405297 + AT_rich Low_complexity Low_complexity 1 41 0 4 619 31 44 0 0 chr3R 4507330 4507375 -23397678 + AT_rich Low_complexity Low_complexity 1 45 0 4 619 38 68 0 0 chr3R 4509836 4509909 -23395144 + AT_rich Low_complexity Low_complexity 1 73 0 4 619 183 42 0 0 chr3R 4513321 4513345 -23391708 + (TTTTTG)n Simple_repeat Simple_repeat 5 28 0 4 619 26 30 0 0 chr3R 4513909 4513942 -23391111 + AT_rich Low_complexity Low_complexity 1 33 0 4 619 183 156 0 0 chr3R 4517838 4517870 -23387183 + (CTG)n Simple_repeat Simple_repeat 1 32 0 4 619 239 234 13 13 chr3R 4519511 4519589 -23385464 + (CTG)n Simple_repeat Simple_repeat 3 80 0 4 619 186 71 0 0 chr3R 4519670 4519698 -23385355 + (CTG)n Simple_repeat Simple_repeat 2 29 0 4 619 290 264 0 0 chr3R 4519974 4520046 -23385007 + T-rich Low_complexity Low_complexity 1 72 0 4 619 21 0 0 0 chr3R 4522087 4522108 -23382945 + AT_rich Low_complexity Low_complexity 1 21 0 4 619 218 178 0 43 chr3R 4523857 4523904 -23381149 + (CTCA)n Simple_repeat Simple_repeat 3 47 0 4 619 34 24 0 0 chr3R 4527577 4527618 -23377435 + AT_rich Low_complexity Low_complexity 1 41 0 4 619 210 122 0 47 chr3R 4528172 4528215 -23376838 + A-rich Low_complexity Low_complexity 1 41 0 4 619 24 32 0 0 chr3R 4529383 4529414 -23375639 + AT_rich Low_complexity Low_complexity 1 31 0 4 619 207 200 0 0 chr3R 4529772 4529817 -23375236 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 619 34 24 0 0 chr3R 4530097 4530138 -23374915 + AT_rich Low_complexity Low_complexity 1 41 0 4 619 21 0 0 0 chr3R 4530896 4530917 -23374136 + AT_rich Low_complexity Low_complexity 1 21 0 4 619 270 271 0 0 chr3R 4531453 4531538 -23373515 + (TG)n Simple_repeat Simple_repeat 2 86 0 4 619 27 0 0 0 chr3R 4531655 4531682 -23373371 + AT_rich Low_complexity Low_complexity 1 27 0 4 619 240 35 0 0 chr3R 4533132 4533161 -23371892 + (T)n Simple_repeat Simple_repeat 1 29 0 4 619 1396 0 0 6 chr3R 4533182 4533346 -23371707 - LINEJ1_DM LINE Jockey -13 5007 4845 4 619 19984 8 1 0 chr3R 4533346 4535508 -23369545 - LINEJ1_DM LINE Jockey -2848 2172 10 4 619 192 111 0 0 chr3R 4535648 4535684 -23369369 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 619 43 20 0 0 chr3R 4535988 4536038 -23369015 + AT_rich Low_complexity Low_complexity 1 50 0 4 619 218 200 0 0 chr3R 4536770 4536815 -23368238 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 619 206 137 19 38 chr3R 4537799 4537852 -23367201 + (TAA)n Simple_repeat Simple_repeat 3 54 0 4 619 21 36 0 0 chr3R 4538451 4538479 -23366574 + AT_rich Low_complexity Low_complexity 1 28 0 4 619 202 219 0 63 chr3R 4538484 4538611 -23366442 + (TTTA)n Simple_repeat Simple_repeat 1 119 0 4 619 23 0 0 0 chr3R 4539515 4539538 -23365515 + AT_rich Low_complexity Low_complexity 1 23 0 4 619 209 232 0 18 chr3R 4542234 4542291 -23362762 + GA-rich Low_complexity Low_complexity 3 58 0 4 619 21 0 0 0 chr3R 4544550 4544571 -23360482 + AT_rich Low_complexity Low_complexity 1 21 0 4 619 68 48 0 0 chr3R 4557586 4557689 -23347364 + AT_rich Low_complexity Low_complexity 1 103 0 4 619 21 71 0 0 chr3R 4560478 4560520 -23344533 + AT_rich Low_complexity Low_complexity 1 42 0 4 619 21 36 0 0 chr3R 4562173 4562201 -23342852 + AT_rich Low_complexity Low_complexity 1 28 0 4 619 22 0 0 0 chr3R 4571513 4571535 -23333518 + AT_rich Low_complexity Low_complexity 1 22 0 4 619 411 162 8 25 chr3R 4581679 4581799 -23323254 + (TTG)n Simple_repeat Simple_repeat 1 118 0 4 619 22 0 0 0 chr3R 4582255 4582277 -23322776 + AT_rich Low_complexity Low_complexity 1 22 0 4 619 31 26 0 0 chr3R 4584864 4584902 -23320151 + AT_rich Low_complexity Low_complexity 1 38 0 4 620 25 0 0 0 chr3R 4589140 4589165 -23315888 + AT_rich Low_complexity Low_complexity 1 25 0 4 620 232 250 0 14 chr3R 4589411 4589484 -23315569 + (TG)n Simple_repeat Simple_repeat 2 73 0 4 620 29 28 0 0 chr3R 4589618 4589654 -23315399 + AT_rich Low_complexity Low_complexity 1 36 0 4 620 22 35 0 0 chr3R 4596913 4596942 -23308111 + AT_rich Low_complexity Low_complexity 1 29 0 4 620 267 79 0 0 chr3R 4599750 4599788 -23305265 + (CCA)n Simple_repeat Simple_repeat 2 39 0 4 620 24 53 0 0 chr3R 4611936 4611974 -23293079 + AT_rich Low_complexity Low_complexity 1 38 0 4 620 22 0 0 0 chr3R 4615696 4615718 -23289335 + AT_rich Low_complexity Low_complexity 1 22 0 4 620 207 125 0 0 chr3R 4616602 4616642 -23288411 + (CATCC)n Simple_repeat Simple_repeat 5 44 0 4 620 21 57 0 0 chr3R 4617174 4617209 -23287844 + AT_rich Low_complexity Low_complexity 1 35 0 4 620 180 0 0 0 chr3R 4618333 4618353 -23286700 + (TGAG)n Simple_repeat Simple_repeat 3 22 0 4 620 21 0 0 0 chr3R 4620043 4620064 -23284989 + AT_rich Low_complexity Low_complexity 1 21 0 4 620 189 0 0 0 chr3R 4625253 4625274 -23279779 + (CTCA)n Simple_repeat Simple_repeat 3 23 0 4 620 26 0 0 0 chr3R 4631471 4631497 -23273556 + AT_rich Low_complexity Low_complexity 1 26 0 4 620 33 0 0 0 chr3R 4636942 4636975 -23268078 + AT_rich Low_complexity Low_complexity 1 33 0 4 620 193 53 0 73 chr3R 4639936 4639977 -23265076 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 4 620 26 50 0 0 chr3R 4640820 4640860 -23264193 + AT_rich Low_complexity Low_complexity 1 40 0 4 620 36 23 0 0 chr3R 4642755 4642798 -23262255 + AT_rich Low_complexity Low_complexity 1 43 0 4 620 225 227 0 26 chr3R 4643364 4643441 -23261612 + T-rich Low_complexity Low_complexity 4 78 0 4 620 183 167 0 0 chr3R 4644046 4644088 -23260965 + (CTG)n Simple_repeat Simple_repeat 1 42 0 4 620 186 71 0 0 chr3R 4645970 4645998 -23259055 + (TA)n Simple_repeat Simple_repeat 1 28 0 4 620 21 36 0 0 chr3R 4649791 4649819 -23255234 + AT_rich Low_complexity Low_complexity 1 28 0 4 620 21 57 0 0 chr3R 4649951 4649986 -23255067 + AT_rich Low_complexity Low_complexity 1 35 0 4 620 24 0 0 0 chr3R 4653643 4653667 -23251386 + AT_rich Low_complexity Low_complexity 1 24 0 4 620 216 167 0 0 chr3R 4657593 4657641 -23247412 + (ATTG)n Simple_repeat Simple_repeat 3 50 0 4 620 201 373 0 0 chr3R 4659356 4659415 -23245638 + G-rich Low_complexity Low_complexity 3 61 0 4 620 189 0 0 0 chr3R 4660278 4660299 -23244754 + (CTG)n Simple_repeat Simple_repeat 1 21 0 4 620 189 94 0 0 chr3R 4660949 4660981 -23244072 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 4 620 229 316 0 0 chr3R 4662362 4662438 -23242615 - ROO_I LTR Pao -7505 751 676 4 620 231 133 0 0 chr3R 4662701 4662746 -23242307 + (CTG)n Simple_repeat Simple_repeat 3 47 0 4 620 23 54 0 0 chr3R 4664718 4664755 -23240298 + AT_rich Low_complexity Low_complexity 1 37 0 4 620 26 30 0 0 chr3R 4666681 4666714 -23238339 + AT_rich Low_complexity Low_complexity 1 33 0 4 620 243 61 0 0 chr3R 4672703 4672736 -23232317 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 620 246 32 0 0 chr3R 4672898 4672929 -23232124 + (AACTG)n Simple_repeat Simple_repeat 4 34 0 4 620 33 43 0 0 chr3R 4674621 4674668 -23230385 + AT_rich Low_complexity Low_complexity 1 47 0 4 620 189 0 0 0 chr3R 4677260 4677281 -23227772 + (A)n Simple_repeat Simple_repeat 1 21 0 4 620 23 78 0 0 chr3R 4678589 4678640 -23226413 + AT_rich Low_complexity Low_complexity 1 51 0 4 620 183 42 0 0 chr3R 4679815 4679839 -23225214 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 620 261 83 0 0 chr3R 4682018 4682054 -23222999 + (T)n Simple_repeat Simple_repeat 1 36 0 4 620 222 37 0 0 chr3R 4683650 4683677 -23221376 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 620 31 68 0 0 chr3R 4683883 4683942 -23221111 + AT_rich Low_complexity Low_complexity 1 59 0 4 620 24 32 0 0 chr3R 4686445 4686476 -23218577 + AT_rich Low_complexity Low_complexity 1 31 0 4 620 21 0 0 0 chr3R 4687703 4687724 -23217329 + AT_rich Low_complexity Low_complexity 1 21 0 4 620 240 169 0 0 chr3R 4688100 4688159 -23216894 - ROO_I LTR Pao -7557 699 641 4 620 27 0 0 0 chr3R 4688953 4688980 -23216073 + AT_rich Low_complexity Low_complexity 1 27 0 4 620 21 0 0 0 chr3R 4691029 4691050 -23214003 + AT_rich Low_complexity Low_complexity 1 21 0 4 620 192 77 0 0 chr3R 4691426 4691452 -23213601 + (CAT)n Simple_repeat Simple_repeat 3 28 0 4 620 214 165 81 12 chr3R 4692777 4692863 -23212190 + (TTTA)n Simple_repeat Simple_repeat 4 95 0 4 620 28 61 0 0 chr3R 4693506 4693555 -23211498 + AT_rich Low_complexity Low_complexity 1 49 0 4 620 266 73 0 24 chr3R 4694530 4694572 -23210481 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 620 3515 5 7 7 chr3R 4694572 4694985 -23210068 + DM297_LTR LTR Gypsy 2 414 0 4 620 18757 5 0 2 chr3R 4694985 4697176 -23207877 + DM297_I LTR Gypsy 1 2187 -3980 4 620 6374 9 0 0 chr3R 4697170 4697944 -23207109 + DM297_I LTR Gypsy 5394 6167 0 4 620 3523 5 7 7 chr3R 4697944 4698358 -23206695 + DM297_LTR LTR Gypsy 1 414 0 4 620 23 33 0 0 chr3R 4698569 4698599 -23206454 + AT_rich Low_complexity Low_complexity 1 30 0 4 620 21 0 0 0 chr3R 4699218 4699239 -23205814 + AT_rich Low_complexity Low_complexity 1 21 0 4 620 21 0 0 0 chr3R 4700717 4700738 -23204315 + AT_rich Low_complexity Low_complexity 1 21 0 4 620 182 59 0 81 chr3R 4703152 4703189 -23201864 + (TAAAAA)n Simple_repeat Simple_repeat 5 38 0 4 620 26 0 0 0 chr3R 4703775 4703801 -23201252 + AT_rich Low_complexity Low_complexity 1 26 0 4 620 309 26 0 0 chr3R 4707383 4707421 -23197632 + (TA)n Simple_repeat Simple_repeat 1 38 0 4 620 195 42 0 0 chr3R 4708209 4708233 -23196820 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 620 189 107 0 0 chr3R 4708386 4708414 -23196639 + (TATG)n Simple_repeat Simple_repeat 4 31 0 4 620 285 51 0 0 chr3R 4710073 4710112 -23194941 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 620 24 0 0 0 chr3R 4716692 4716716 -23188337 + AT_rich Low_complexity Low_complexity 1 24 0 4 620 33 0 0 0 chr3R 4716779 4716812 -23188241 + AT_rich Low_complexity Low_complexity 1 33 0 4 620 206 121 0 0 chr3R 4717010 4717043 -23188010 + (A)n Simple_repeat Simple_repeat 1 33 0 4 620 23 33 0 0 chr3R 4718376 4718406 -23186647 + AT_rich Low_complexity Low_complexity 1 30 0 4 621 208 122 102 0 chr3R 4719339 4719388 -23185665 + (GCTTG)n Simple_repeat Simple_repeat 3 56 0 4 621 9467 13 8 0 chr3R 4720649 4721745 -23183308 - PROTOP_A DNA P 0 1105 1 4 621 23 0 0 0 chr3R 4723637 4723660 -23181393 + AT_rich Low_complexity Low_complexity 1 23 0 4 621 3368 5 7 7 chr3R 4723997 4724411 -23180642 + DM297_LTR LTR Gypsy 1 414 0 4 621 671 23 11 0 chr3R 4724411 4724498 -23180555 + DM297_I LTR Gypsy 1 88 -6079 4 621 2667 39 0 0 chr3R 4724498 4724834 -23180219 + DM1731_LTR LTR Copia 1 336 0 4 621 34119 6 1 1 chr3R 4724834 4728810 -23176243 + DM1731_I LTR Copia 1 3976 0 4 621 2667 39 0 0 chr3R 4728810 4729146 -23175907 + DM1731_LTR LTR Copia 1 336 0 4 621 8302 4 0 4 chr3R 4729146 4730157 -23174896 + DM297_I LTR Gypsy 84 1090 -5077 4 621 3245 10 0 0 chr3R 4730148 4730537 -23174516 + DM297_I LTR Gypsy 3942 4330 -1837 4 621 9371 9 0 0 chr3R 4730535 4731690 -23173363 + DM297_I LTR Gypsy 5013 6167 0 4 621 3368 5 7 7 chr3R 4731690 4732104 -23172949 + DM297_LTR LTR Gypsy 1 414 0 4 621 3054 3 0 24 chr3R 4732110 4732486 -23172567 + ROVER-LTR_DM LTR Gypsy 1 367 0 4 621 54520 1 0 11 chr3R 4732486 4739146 -23165907 + ROVER-I_DM LTR Gypsy 1 6584 0 4 621 3054 3 0 24 chr3R 4739146 4739522 -23165531 + ROVER-LTR_DM LTR Gypsy 1 367 0 4 621 180 0 0 0 chr3R 4739806 4739826 -23165227 + (GAATG)n Simple_repeat Simple_repeat 5 24 0 4 621 29 60 0 0 chr3R 4741004 4741054 -23163999 + AT_rich Low_complexity Low_complexity 1 50 0 4 621 25 51 0 0 chr3R 4744129 4744168 -23160885 + AT_rich Low_complexity Low_complexity 1 39 0 4 621 299 227 0 60 chr3R 4745049 4745166 -23159887 - ROO_I LTR Pao -7514 742 633 4 621 238 224 0 0 chr3R 4748419 4748468 -23156585 + A-rich Low_complexity Low_complexity 1 49 0 4 621 186 103 0 0 chr3R 4753054 4753083 -23151970 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 4 621 189 0 0 0 chr3R 4755542 4755563 -23149490 + (T)n Simple_repeat Simple_repeat 1 21 0 4 621 21 36 0 0 chr3R 4759352 4759380 -23145673 + AT_rich Low_complexity Low_complexity 1 28 0 4 621 27 49 0 0 chr3R 4760573 4760614 -23144439 + AT_rich Low_complexity Low_complexity 1 41 0 4 621 32 75 0 0 chr3R 4761526 4761593 -23143460 + AT_rich Low_complexity Low_complexity 1 67 0 4 621 21 36 0 0 chr3R 4764087 4764115 -23140938 + AT_rich Low_complexity Low_complexity 1 28 0 4 621 26 0 0 0 chr3R 4765299 4765325 -23139728 + AT_rich Low_complexity Low_complexity 1 26 0 4 621 211 217 0 77 chr3R 4768493 4768558 -23136495 + A-rich Low_complexity Low_complexity 2 61 0 4 621 23 54 0 0 chr3R 4770947 4770984 -23134069 + AT_rich Low_complexity Low_complexity 1 37 0 4 621 30 45 0 0 chr3R 4771033 4771077 -23133976 + AT_rich Low_complexity Low_complexity 1 44 0 4 621 22 56 0 0 chr3R 4771176 4771212 -23133841 + AT_rich Low_complexity Low_complexity 1 36 0 4 621 219 241 0 0 chr3R 4771386 4771440 -23133613 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 621 23 54 0 0 chr3R 4772223 4772260 -23132793 + AT_rich Low_complexity Low_complexity 1 37 0 4 621 231 114 0 0 chr3R 4773693 4773728 -23131325 + (CAA)n Simple_repeat Simple_repeat 1 35 0 4 621 27 96 0 0 chr3R 4773937 4774020 -23131033 + AT_rich Low_complexity Low_complexity 1 83 0 4 621 207 0 0 0 chr3R 4774091 4774114 -23130939 + (GGA)n Simple_repeat Simple_repeat 3 25 0 4 621 29 0 0 0 chr3R 4774737 4774766 -23130287 + AT_rich Low_complexity Low_complexity 1 29 0 4 621 393 58 0 0 chr3R 4775161 4775213 -23129840 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 621 237 65 0 0 chr3R 4775590 4775621 -23129432 + (GTTTG)n Simple_repeat Simple_repeat 2 32 0 4 621 31 0 0 0 chr3R 4775957 4775988 -23129065 + AT_rich Low_complexity Low_complexity 1 31 0 4 621 267 103 0 0 chr3R 4778072 4778111 -23126942 + (CTG)n Simple_repeat Simple_repeat 1 39 0 4 621 25 95 0 0 chr3R 4780760 4780834 -23124219 + AT_rich Low_complexity Low_complexity 1 74 0 4 621 209 189 0 0 chr3R 4780981 4781018 -23124035 + CT-rich Low_complexity Low_complexity 1 37 0 4 621 25 0 0 0 chr3R 4781768 4781793 -23123260 + AT_rich Low_complexity Low_complexity 1 25 0 4 621 303 28 0 0 chr3R 4785106 4785142 -23119911 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 621 198 0 0 0 chr3R 4785150 4785172 -23119881 + (TTA)n Simple_repeat Simple_repeat 2 23 0 4 621 28 61 0 0 chr3R 4785613 4785662 -23119391 + AT_rich Low_complexity Low_complexity 1 49 0 4 621 25 51 0 0 chr3R 4786258 4786297 -23118756 + AT_rich Low_complexity Low_complexity 1 39 0 4 621 23 0 0 0 chr3R 4787987 4788010 -23117043 + AT_rich Low_complexity Low_complexity 1 23 0 4 621 29 28 0 0 chr3R 4789476 4789512 -23115541 + AT_rich Low_complexity Low_complexity 1 36 0 4 621 28 0 0 0 chr3R 4790539 4790567 -23114486 + AT_rich Low_complexity Low_complexity 1 28 0 4 621 23 33 0 0 chr3R 4796071 4796101 -23108952 + AT_rich Low_complexity Low_complexity 1 30 0 4 621 23 68 0 0 chr3R 4796120 4796164 -23108889 + AT_rich Low_complexity Low_complexity 1 44 0 4 621 212 191 24 0 chr3R 4796521 4796563 -23108490 + (TTG)n Simple_repeat Simple_repeat 3 45 0 4 621 210 91 0 0 chr3R 4801979 4802012 -23103041 + (CTG)n Simple_repeat Simple_repeat 3 35 0 4 621 186 71 0 0 chr3R 4802354 4802382 -23102671 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 4 621 35 0 0 0 chr3R 4802703 4802738 -23102315 + AT_rich Low_complexity Low_complexity 1 35 0 4 621 230 245 0 0 chr3R 4803141 4803190 -23101863 + (CATA)n Simple_repeat Simple_repeat 4 52 0 4 621 28 0 0 0 chr3R 4803324 4803352 -23101701 + AT_rich Low_complexity Low_complexity 1 28 0 4 621 22 0 0 0 chr3R 4803783 4803805 -23101248 + AT_rich Low_complexity Low_complexity 1 22 0 4 621 207 0 0 0 chr3R 4804053 4804076 -23100977 + (CA)n Simple_repeat Simple_repeat 1 23 0 4 621 22 35 0 0 chr3R 4804618 4804647 -23100406 + AT_rich Low_complexity Low_complexity 1 29 0 4 621 27 0 0 0 chr3R 4804689 4804716 -23100337 + AT_rich Low_complexity Low_complexity 1 27 0 4 621 24 53 0 0 chr3R 4810093 4810131 -23094922 + AT_rich Low_complexity Low_complexity 1 38 0 4 621 32 0 0 0 chr3R 4816310 4816342 -23088711 + AT_rich Low_complexity Low_complexity 1 32 0 4 621 23 33 0 0 chr3R 4816505 4816535 -23088518 + AT_rich Low_complexity Low_complexity 1 30 0 4 621 189 0 0 0 chr3R 4817860 4817881 -23087172 + (TCC)n Simple_repeat Simple_repeat 2 22 0 4 621 216 67 0 0 chr3R 4824865 4824895 -23080158 + (GATTG)n Simple_repeat Simple_repeat 5 34 0 4 621 37 0 0 0 chr3R 4836071 4836108 -23068945 + AT_rich Low_complexity Low_complexity 1 37 0 4 621 195 42 0 0 chr3R 4836771 4836795 -23068258 + (CTG)n Simple_repeat Simple_repeat 2 25 0 4 621 229 288 0 0 chr3R 4837519 4837585 -23067468 + (CCG)n Simple_repeat Simple_repeat 1 66 0 4 621 22 0 0 0 chr3R 4842986 4843008 -23062045 + AT_rich Low_complexity Low_complexity 1 22 0 4 621 183 80 0 0 chr3R 4843837 4843862 -23061191 + (CTG)n Simple_repeat Simple_repeat 1 25 0 4 621 23 33 0 0 chr3R 4845887 4845917 -23059136 + AT_rich Low_complexity Low_complexity 1 30 0 4 621 21 57 0 0 chr3R 4849602 4849637 -23055416 + AT_rich Low_complexity Low_complexity 1 35 0 4 622 264 206 0 0 chr3R 4859043 4859106 -23045947 + (CTG)n Simple_repeat Simple_repeat 3 65 0 4 622 183 42 0 0 chr3R 4859373 4859397 -23045656 + (CGAAA)n Simple_repeat Simple_repeat 3 26 0 4 622 21 36 0 0 chr3R 4861601 4861629 -23043424 + AT_rich Low_complexity Low_complexity 1 28 0 4 622 25 0 0 0 chr3R 4873848 4873873 -23031180 + AT_rich Low_complexity Low_complexity 1 25 0 4 622 27 96 0 0 chr3R 4873899 4873982 -23031071 + AT_rich Low_complexity Low_complexity 1 83 0 4 622 21 0 0 0 chr3R 4874011 4874032 -23031021 + AT_rich Low_complexity Low_complexity 1 21 0 4 622 23 33 0 0 chr3R 4874047 4874077 -23030976 + AT_rich Low_complexity Low_complexity 1 30 0 4 622 23 33 0 0 chr3R 4878053 4878083 -23026970 + AT_rich Low_complexity Low_complexity 1 30 0 4 622 238 298 0 0 chr3R 4879384 4879441 -23025612 + (CAA)n Simple_repeat Simple_repeat 1 57 0 4 622 200 280 13 0 chr3R 4880255 4880330 -23024723 + (TG)n Simple_repeat Simple_repeat 2 77 0 4 622 213 224 0 0 chr3R 4881942 4881991 -23023062 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 622 24 67 0 0 chr3R 4883203 4883248 -23021805 + AT_rich Low_complexity Low_complexity 1 45 0 4 622 250 197 16 0 chr3R 4893563 4893624 -23011429 + (TA)n Simple_repeat Simple_repeat 1 62 0 4 622 219 228 0 0 chr3R 4894399 4894456 -23010597 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 622 278 148 19 0 chr3R 4894884 4894938 -23010115 + (CGA)n Simple_repeat Simple_repeat 3 57 0 4 622 183 156 0 0 chr3R 4898171 4898203 -23006850 + (CTG)n Simple_repeat Simple_repeat 3 34 0 4 622 205 184 0 0 chr3R 4898228 4898266 -23006787 + (CTG)n Simple_repeat Simple_repeat 3 40 0 4 622 269 118 20 0 chr3R 4902242 4902293 -23002760 + (CTG)n Simple_repeat Simple_repeat 3 54 0 4 622 195 100 0 0 chr3R 4902669 4902699 -23002354 + (CAGA)n Simple_repeat Simple_repeat 2 31 0 4 622 203 175 0 0 chr3R 4903361 4903401 -23001652 + A-rich Low_complexity Low_complexity 1 40 0 4 622 252 85 85 0 chr3R 4904113 4904172 -23000881 + (TAAAG)n Simple_repeat Simple_repeat 2 65 0 4 622 336 127 0 0 chr3R 4906549 4906604 -22998449 + (CTG)n Simple_repeat Simple_repeat 3 57 0 4 622 270 275 0 0 chr3R 4906635 4906715 -22998338 + (CTG)n Simple_repeat Simple_repeat 2 81 0 4 622 180 77 0 0 chr3R 4907180 4907206 -22997847 + (CAAAT)n Simple_repeat Simple_repeat 2 27 0 4 622 197 65 32 0 chr3R 4909600 4909631 -22995422 + (CAG)n Simple_repeat Simple_repeat 2 33 0 4 622 192 40 0 0 chr3R 4914897 4914922 -22990131 + (TAA)n Simple_repeat Simple_repeat 3 27 0 4 622 215 157 20 0 chr3R 4916249 4916300 -22988753 + (CAA)n Simple_repeat Simple_repeat 2 53 0 4 622 203 184 0 0 chr3R 4916518 4916556 -22988497 + T-rich Low_complexity Low_complexity 5 42 0 4 622 246 116 0 0 chr3R 4918507 4918550 -22986503 + (CAGAC)n Simple_repeat Simple_repeat 5 47 0 4 622 189 0 0 0 chr3R 4920585 4920606 -22984447 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 622 221 171 0 0 chr3R 4922166 4922207 -22982846 + (TTG)n Simple_repeat Simple_repeat 2 42 0 4 622 189 154 0 0 chr3R 4923814 4923853 -22981200 + (TTCGGG)n Simple_repeat Simple_repeat 1 39 0 4 622 180 0 0 0 chr3R 4924362 4924382 -22980671 + (CCA)n Simple_repeat Simple_repeat 2 21 0 4 622 252 0 0 0 chr3R 4926792 4926820 -22978233 + (A)n Simple_repeat Simple_repeat 1 28 0 4 622 21 0 0 0 chr3R 4927522 4927543 -22977510 + AT_rich Low_complexity Low_complexity 1 21 0 4 622 25 65 0 0 chr3R 4927916 4927962 -22977091 + AT_rich Low_complexity Low_complexity 1 46 0 4 622 253 254 0 0 chr3R 4930695 4930758 -22974295 + (CTG)n Simple_repeat Simple_repeat 3 65 0 4 622 231 170 0 0 chr3R 4933667 4933714 -22971339 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 622 180 0 0 0 chr3R 4935289 4935309 -22969744 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 622 215 234 0 0 chr3R 4938406 4938453 -22966600 + (ATG)n Simple_repeat Simple_repeat 1 47 0 4 622 203 184 0 0 chr3R 4939368 4939406 -22965647 + T-rich Low_complexity Low_complexity 1 38 0 4 622 198 0 0 0 chr3R 4940105 4940127 -22964926 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 622 215 190 0 23 chr3R 4940329 4940372 -22964681 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 622 318 98 0 0 chr3R 4942284 4942335 -22962718 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 622 200 220 20 0 chr3R 4943189 4943239 -22961814 + GA-rich Low_complexity Low_complexity 5 55 0 4 622 189 0 0 0 chr3R 4944157 4944178 -22960875 + (T)n Simple_repeat Simple_repeat 1 21 0 4 622 26 30 0 0 chr3R 4945441 4945474 -22959579 + AT_rich Low_complexity Low_complexity 1 33 0 4 622 270 0 0 0 chr3R 4945950 4945980 -22959073 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 622 264 59 0 0 chr3R 4947403 4947437 -22957616 + (T)n Simple_repeat Simple_repeat 1 34 0 4 622 180 0 0 0 chr3R 4949929 4949949 -22955104 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 622 225 200 0 0 chr3R 4951842 4951887 -22953166 + T-rich Low_complexity Low_complexity 1 45 0 4 622 24 32 0 0 chr3R 4957157 4957188 -22947865 + AT_rich Low_complexity Low_complexity 1 31 0 4 622 213 227 0 0 chr3R 4958323 4958367 -22946686 + (CAA)n Simple_repeat Simple_repeat 2 45 0 4 622 24 0 0 0 chr3R 4958848 4958872 -22946181 + AT_rich Low_complexity Low_complexity 1 24 0 4 622 24 0 0 0 chr3R 4959878 4959902 -22945151 + AT_rich Low_complexity Low_complexity 1 24 0 4 622 221 135 19 0 chr3R 4962669 4962721 -22942332 + (CAT)n Simple_repeat Simple_repeat 2 54 0 4 622 216 0 0 0 chr3R 4963845 4963869 -22941184 + (A)n Simple_repeat Simple_repeat 1 24 0 4 622 21 0 0 0 chr3R 4965081 4965102 -22939951 + AT_rich Low_complexity Low_complexity 1 21 0 4 622 207 0 0 0 chr3R 4967268 4967291 -22937762 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 622 25 0 0 0 chr3R 4969515 4969540 -22935513 + AT_rich Low_complexity Low_complexity 1 25 0 4 622 429 20 0 0 chr3R 4969891 4969941 -22935112 + (CAA)n Simple_repeat Simple_repeat 1 50 0 4 622 212 184 0 0 chr3R 4970215 4970253 -22934800 + A-rich Low_complexity Low_complexity 1 38 0 4 622 21 0 0 0 chr3R 4971269 4971290 -22933763 + AT_rich Low_complexity Low_complexity 1 21 0 4 622 26 0 0 0 chr3R 4971302 4971328 -22933725 + AT_rich Low_complexity Low_complexity 1 26 0 4 622 183 100 0 0 chr3R 4973851 4973881 -22931172 + (T)n Simple_repeat Simple_repeat 1 30 0 4 622 186 71 0 0 chr3R 4974660 4974688 -22930365 + (A)n Simple_repeat Simple_repeat 1 28 0 4 622 201 108 0 0 chr3R 4975306 4975343 -22929710 + (A)n Simple_repeat Simple_repeat 1 37 0 4 622 228 67 0 0 chr3R 4975729 4975759 -22929294 + (T)n Simple_repeat Simple_repeat 1 30 0 4 622 24 0 0 0 chr3R 4979611 4979635 -22925418 + AT_rich Low_complexity Low_complexity 1 24 0 4 622 219 36 0 0 chr3R 4980378 4980406 -22924647 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 4 623 198 143 0 0 chr3R 4980821 4980856 -22924197 + (GTGTG)n Simple_repeat Simple_repeat 3 37 0 4 623 189 0 0 0 chr3R 4980860 4980881 -22924172 + (GAATG)n Simple_repeat Simple_repeat 2 22 0 4 623 24 0 0 0 chr3R 4982060 4982084 -22922969 + AT_rich Low_complexity Low_complexity 1 24 0 4 623 180 97 0 0 chr3R 4983130 4983161 -22921892 + (T)n Simple_repeat Simple_repeat 1 31 0 4 623 33 0 0 0 chr3R 4984493 4984526 -22920527 + AT_rich Low_complexity Low_complexity 1 33 0 4 623 214 195 0 0 chr3R 4984718 4984759 -22920294 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 623 25 31 0 0 chr3R 4985125 4985157 -22919896 + AT_rich Low_complexity Low_complexity 1 32 0 4 623 25 0 0 0 chr3R 4985791 4985816 -22919237 + AT_rich Low_complexity Low_complexity 1 25 0 4 623 25 51 0 0 chr3R 4987473 4987512 -22917541 + AT_rich Low_complexity Low_complexity 1 39 0 4 623 270 0 0 0 chr3R 4989589 4989619 -22915434 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 623 201 154 51 0 chr3R 4990607 4990646 -22914407 + A-rich Low_complexity Low_complexity 6 46 0 4 623 27 29 0 0 chr3R 4992501 4992535 -22912518 + AT_rich Low_complexity Low_complexity 1 34 0 4 623 384 22 0 0 chr3R 4994319 4994364 -22910689 + (ATG)n Simple_repeat Simple_repeat 3 47 0 4 623 185 108 27 0 chr3R 4995360 4995397 -22909656 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 623 180 0 0 0 chr3R 4995553 4995573 -22909480 + (TACTG)n Simple_repeat Simple_repeat 4 23 0 4 623 26 0 0 0 chr3R 4997616 4997642 -22907411 + AT_rich Low_complexity Low_complexity 1 26 0 4 623 23 33 0 0 chr3R 5004632 5004662 -22900391 + AT_rich Low_complexity Low_complexity 1 30 0 4 623 22 0 0 0 chr3R 5005520 5005542 -22899511 + AT_rich Low_complexity Low_complexity 1 22 0 4 623 195 96 19 37 chr3R 5006308 5006362 -22898691 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 4 623 207 162 0 0 chr3R 5008357 5008394 -22896659 + (ATG)n Simple_repeat Simple_repeat 3 39 0 4 623 26 30 0 0 chr3R 5009574 5009607 -22895446 + AT_rich Low_complexity Low_complexity 1 33 0 4 623 236 254 0 0 chr3R 5010310 5010365 -22894688 + (CATG)n Simple_repeat Simple_repeat 2 56 0 4 623 274 287 0 22 chr3R 5010988 5011077 -22893976 + (TTCCG)n Simple_repeat Simple_repeat 4 90 0 4 623 189 74 0 0 chr3R 5013222 5013249 -22891804 + (T)n Simple_repeat Simple_repeat 1 27 0 4 623 237 65 0 0 chr3R 5013300 5013331 -22891722 + (TTG)n Simple_repeat Simple_repeat 2 32 0 4 623 21 0 0 0 chr3R 5016685 5016706 -22888347 + AT_rich Low_complexity Low_complexity 1 21 0 4 623 23 33 0 0 chr3R 5018252 5018282 -22886771 + AT_rich Low_complexity Low_complexity 1 30 0 4 623 23 0 0 0 chr3R 5018918 5018941 -22886112 + AT_rich Low_complexity Low_complexity 1 23 0 4 623 28 29 0 0 chr3R 5020183 5020218 -22884835 + AT_rich Low_complexity Low_complexity 1 35 0 4 623 28 29 0 0 chr3R 5025010 5025045 -22880008 + AT_rich Low_complexity Low_complexity 1 35 0 4 623 234 160 0 0 chr3R 5027839 5027889 -22877164 + (CTA)n Simple_repeat Simple_repeat 2 51 0 4 623 26 50 0 0 chr3R 5028362 5028402 -22876651 + AT_rich Low_complexity Low_complexity 1 40 0 4 623 225 128 0 0 chr3R 5030448 5030495 -22874558 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 623 261 83 0 0 chr3R 5031948 5031984 -22873069 + (T)n Simple_repeat Simple_repeat 1 36 0 4 623 234 0 0 0 chr3R 5032770 5032796 -22872257 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 623 21 36 0 0 chr3R 5036371 5036399 -22868654 + AT_rich Low_complexity Low_complexity 1 28 0 4 623 21 0 0 0 chr3R 5039631 5039652 -22865401 + AT_rich Low_complexity Low_complexity 1 21 0 4 623 208 217 0 0 chr3R 5039793 5039839 -22865214 + (CCG)n Simple_repeat Simple_repeat 2 47 0 4 623 31 26 0 0 chr3R 5040004 5040042 -22865011 + AT_rich Low_complexity Low_complexity 1 38 0 4 623 225 0 0 0 chr3R 5041641 5041666 -22863387 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 623 24 32 0 0 chr3R 5044536 5044567 -22860486 + AT_rich Low_complexity Low_complexity 1 31 0 4 623 21 57 0 0 chr3R 5047289 5047324 -22857729 + AT_rich Low_complexity Low_complexity 1 35 0 4 623 324 0 0 0 chr3R 5050579 5050615 -22854438 + (A)n Simple_repeat Simple_repeat 1 36 0 4 623 279 0 0 0 chr3R 5055914 5055945 -22849108 + (GA)n Simple_repeat Simple_repeat 2 32 0 4 623 285 98 0 0 chr3R 5058087 5058128 -22846925 + (CTG)n Simple_repeat Simple_repeat 1 41 0 4 623 254 177 0 25 chr3R 5058215 5058296 -22846757 + (CTG)n Simple_repeat Simple_repeat 3 81 0 4 623 204 200 0 0 chr3R 5059444 5059484 -22845569 + (CGG)n Simple_repeat Simple_repeat 1 40 0 4 623 285 151 0 0 chr3R 5059584 5059637 -22845416 + (CTG)n Simple_repeat Simple_repeat 1 53 0 4 623 341 179 0 0 chr3R 5059674 5059752 -22845301 - ROO_I LTR Pao -7527 729 652 4 623 21 0 0 0 chr3R 5059936 5059957 -22845096 + AT_rich Low_complexity Low_complexity 1 21 0 4 623 24 0 0 0 chr3R 5060023 5060047 -22845006 + AT_rich Low_complexity Low_complexity 1 24 0 4 623 24 77 0 0 chr3R 5060131 5060183 -22844870 + AT_rich Low_complexity Low_complexity 1 52 0 4 623 24 0 0 0 chr3R 5061699 5061723 -22843330 + AT_rich Low_complexity Low_complexity 1 24 0 4 623 251 269 0 0 chr3R 5063086 5063153 -22841900 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 623 216 303 0 0 chr3R 5064113 5064202 -22840851 + T-rich Low_complexity Low_complexity 1 89 0 4 623 22 35 0 0 chr3R 5066824 5066853 -22838200 + AT_rich Low_complexity Low_complexity 1 29 0 4 623 23 33 0 0 chr3R 5072290 5072320 -22832733 + AT_rich Low_complexity Low_complexity 1 30 0 4 623 21 0 0 0 chr3R 5077135 5077156 -22827897 + AT_rich Low_complexity Low_complexity 1 21 0 4 623 21 57 0 0 chr3R 5078701 5078736 -22826317 + AT_rich Low_complexity Low_complexity 1 35 0 4 623 33 73 0 0 chr3R 5080475 5080543 -22824510 + AT_rich Low_complexity Low_complexity 1 68 0 4 623 24 53 0 0 chr3R 5086229 5086267 -22818786 + AT_rich Low_complexity Low_complexity 1 38 0 4 623 231 180 0 39 chr3R 5087893 5087945 -22817108 + GA-rich Low_complexity Low_complexity 3 52 0 4 623 25 51 0 0 chr3R 5095920 5095959 -22809094 + AT_rich Low_complexity Low_complexity 1 39 0 4 623 21 57 0 0 chr3R 5098487 5098522 -22806531 + AT_rich Low_complexity Low_complexity 1 35 0 4 623 228 67 0 0 chr3R 5100672 5100702 -22804351 + (CATAC)n Simple_repeat Simple_repeat 4 33 0 4 623 21 36 0 0 chr3R 5104036 5104064 -22800989 + AT_rich Low_complexity Low_complexity 1 28 0 4 623 26 30 0 0 chr3R 5104116 5104149 -22800904 + AT_rich Low_complexity Low_complexity 1 33 0 4 623 48019 2 0 0 chr3R 5104561 5109744 -22795309 - DMRT1A LINE R1 0 5183 1 4 624 21 0 0 0 chr3R 5111878 5111899 -22793154 + AT_rich Low_complexity Low_complexity 1 21 0 4 624 216 97 0 0 chr3R 5111966 5111997 -22793056 + (T)n Simple_repeat Simple_repeat 1 31 0 4 624 243 0 0 0 chr3R 5112281 5112308 -22792745 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 624 293 68 0 22 chr3R 5115612 5115657 -22789396 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 624 201 156 0 0 chr3R 5115899 5115931 -22789122 + (CAT)n Simple_repeat Simple_repeat 3 34 0 4 624 234 0 0 0 chr3R 5118959 5118985 -22786068 + (TA)n Simple_repeat Simple_repeat 1 26 0 4 624 24 32 0 0 chr3R 5119861 5119892 -22785161 + AT_rich Low_complexity Low_complexity 1 31 0 4 624 21 36 0 0 chr3R 5120637 5120665 -22784388 + AT_rich Low_complexity Low_complexity 1 28 0 4 624 21 0 0 0 chr3R 5120678 5120699 -22784354 + AT_rich Low_complexity Low_complexity 1 21 0 4 624 201 132 0 0 chr3R 5124929 5124967 -22780086 + (GA)n Simple_repeat Simple_repeat 2 39 0 4 624 369 109 0 0 chr3R 5126009 5126064 -22778989 + (TA)n Simple_repeat Simple_repeat 2 56 0 4 624 198 103 0 0 chr3R 5126518 5126547 -22778506 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 624 3442 2 0 2 chr3R 5130305 5130708 -22774345 + STALKER4_LTR LTR Gypsy 1 402 0 4 624 289 96 0 37 chr3R 5130712 5130766 -22774287 + STALKER4_I LTR Gypsy 1 52 -7350 4 624 47745 19 10 5 chr3R 5130940 5137128 -22767925 + STALKER4_I LTR Gypsy 242 6530 0 4 624 3442 2 0 2 chr3R 5137128 5137531 -22767522 + STALKER4_LTR LTR Gypsy 1 402 0 4 624 270 229 16 0 chr3R 5137569 5137630 -22767423 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 624 27 0 0 0 chr3R 5138036 5138063 -22766990 + AT_rich Low_complexity Low_complexity 1 27 0 4 624 234 0 0 0 chr3R 5142522 5142548 -22762505 + (CCA)n Simple_repeat Simple_repeat 1 26 0 4 624 226 237 0 0 chr3R 5143761 5143820 -22761233 + T-rich Low_complexity Low_complexity 1 59 0 4 624 255 31 0 0 chr3R 5143942 5143974 -22761079 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 624 2825 6 0 33 chr3R 5145352 5145716 -22759337 + LINEJ1_DM LINE Jockey 4669 5020 0 4 624 21 0 0 0 chr3R 5148046 5148067 -22756986 + AT_rich Low_complexity Low_complexity 1 21 0 4 624 183 80 0 0 chr3R 5149597 5149622 -22755431 + (CAT)n Simple_repeat Simple_repeat 1 25 0 4 624 21 0 0 0 chr3R 5150711 5150732 -22754321 + AT_rich Low_complexity Low_complexity 1 21 0 4 624 333 82 0 0 chr3R 5151136 5151185 -22753868 + (TGGA)n Simple_repeat Simple_repeat 2 50 0 4 624 23 0 0 0 chr3R 5154575 5154598 -22750455 + AT_rich Low_complexity Low_complexity 1 23 0 4 624 30 0 0 0 chr3R 5155759 5155789 -22749264 + AT_rich Low_complexity Low_complexity 1 30 0 4 624 25 0 0 0 chr3R 5166688 5166713 -22738340 + AT_rich Low_complexity Low_complexity 1 25 0 4 624 40 37 0 0 chr3R 5168508 5168562 -22736491 + AT_rich Low_complexity Low_complexity 1 54 0 4 624 264 59 0 0 chr3R 5171923 5171957 -22733096 + (ATG)n Simple_repeat Simple_repeat 1 34 0 4 624 203 175 0 24 chr3R 5173641 5173682 -22731371 + CT-rich Low_complexity Low_complexity 4 43 0 4 624 24 32 0 0 chr3R 5177401 5177432 -22727621 + AT_rich Low_complexity Low_complexity 1 31 0 4 624 267 250 16 0 chr3R 5178923 5178987 -22726066 + CT-rich Low_complexity Low_complexity 2 66 0 4 624 21 57 0 0 chr3R 5179176 5179211 -22725842 + AT_rich Low_complexity Low_complexity 1 35 0 4 624 24 67 0 0 chr3R 5185037 5185082 -22719971 + AT_rich Low_complexity Low_complexity 1 45 0 4 624 212 292 0 45 chr3R 5185093 5185204 -22719849 + A-rich Low_complexity Low_complexity 1 106 0 4 624 22 0 0 0 chr3R 5185366 5185388 -22719665 + AT_rich Low_complexity Low_complexity 1 22 0 4 624 225 157 39 0 chr3R 5185505 5185556 -22719497 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 624 205 182 0 0 chr3R 5185955 5185999 -22719054 + A-rich Low_complexity Low_complexity 1 44 0 4 624 23 0 0 0 chr3R 5186949 5186972 -22718081 + AT_rich Low_complexity Low_complexity 1 23 0 4 624 1720 0 0 0 chr3R 5187590 5187776 -22717277 + POGON1 DNA Pogo 1 186 0 4 624 264 30 0 0 chr3R 5188459 5188492 -22716561 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 624 222 231 0 0 chr3R 5193636 5193688 -22711365 + T-rich Low_complexity Low_complexity 1 52 0 4 624 22 80 0 0 chr3R 5194718 5194768 -22710285 + AT_rich Low_complexity Low_complexity 1 50 0 4 624 201 39 0 0 chr3R 5197266 5197292 -22707761 + (TTA)n Simple_repeat Simple_repeat 1 26 0 4 624 25 0 0 0 chr3R 5200717 5200742 -22704311 + AT_rich Low_complexity Low_complexity 1 25 0 4 624 183 100 0 0 chr3R 5201474 5201504 -22703549 + (T)n Simple_repeat Simple_repeat 1 30 0 4 624 30 59 0 0 chr3R 5203860 5203911 -22701142 + AT_rich Low_complexity Low_complexity 1 51 0 4 624 228 67 0 0 chr3R 5207076 5207106 -22697947 + (AACTG)n Simple_repeat Simple_repeat 1 30 0 4 624 184 73 0 89 chr3R 5215950 5215995 -22689058 + T-rich Low_complexity Low_complexity 2 42 0 4 624 207 0 0 0 chr3R 5218755 5218778 -22686275 + (CAGAA)n Simple_repeat Simple_repeat 1 23 0 4 624 186 227 0 0 chr3R 5219825 5219869 -22685184 + (CAA)n Simple_repeat Simple_repeat 2 45 0 4 624 22 35 0 0 chr3R 5221584 5221613 -22683440 + AT_rich Low_complexity Low_complexity 1 29 0 4 624 38 0 0 0 chr3R 5225925 5225963 -22679090 + AT_rich Low_complexity Low_complexity 1 38 0 4 624 24 67 0 0 chr3R 5239396 5239441 -22665612 + AT_rich Low_complexity Low_complexity 1 45 0 4 625 38 51 0 0 chr3R 5243122 5243181 -22661872 + AT_rich Low_complexity Low_complexity 1 59 0 4 625 207 69 0 0 chr3R 5243956 5243985 -22661068 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 625 23 0 0 0 chr3R 5244623 5244646 -22660407 + AT_rich Low_complexity Low_complexity 1 23 0 4 625 21 36 0 0 chr3R 5245352 5245380 -22659673 + AT_rich Low_complexity Low_complexity 1 28 0 4 625 209 227 0 0 chr3R 5249697 5249741 -22655312 + (TTG)n Simple_repeat Simple_repeat 2 45 0 4 625 225 245 0 0 chr3R 5249847 5249900 -22655153 + (CTG)n Simple_repeat Simple_repeat 3 55 0 4 625 213 94 0 0 chr3R 5250059 5250091 -22654962 + (CTG)n Simple_repeat Simple_repeat 1 32 0 4 625 555 53 0 0 chr3R 5253687 5253762 -22651291 + (TA)n Simple_repeat Simple_repeat 1 75 0 4 625 186 43 0 0 chr3R 5253948 5253971 -22651082 + (GA)n Simple_repeat Simple_repeat 2 24 0 4 625 261 169 0 0 chr3R 5258033 5258092 -22646961 + (CTCG)n Simple_repeat Simple_repeat 4 62 0 4 625 180 0 0 0 chr3R 5258208 5258228 -22646825 + (A)n Simple_repeat Simple_repeat 1 20 0 4 625 261 128 0 0 chr3R 5258246 5258293 -22646760 + (CAATC)n Simple_repeat Simple_repeat 2 48 0 4 625 203 42 0 145 chr3R 5258573 5258656 -22646397 + (CAAAT)n Simple_repeat Simple_repeat 2 72 0 4 625 198 0 0 0 chr3R 5258947 5258969 -22646084 + (TTG)n Simple_repeat Simple_repeat 2 23 0 4 625 207 69 0 0 chr3R 5259178 5259207 -22645846 + (CGAA)n Simple_repeat Simple_repeat 1 29 0 4 625 210 154 0 0 chr3R 5259674 5259713 -22645340 + (TCTG)n Simple_repeat Simple_repeat 1 39 0 4 625 210 226 0 0 chr3R 5261279 5261332 -22643721 + (CAG)n Simple_repeat Simple_repeat 3 55 0 4 625 221 224 0 0 chr3R 5261361 5261410 -22643643 + (GCTG)n Simple_repeat Simple_repeat 1 49 0 4 625 208 108 54 0 chr3R 5262435 5262472 -22642581 + (CTCG)n Simple_repeat Simple_repeat 1 39 0 4 625 246 32 0 0 chr3R 5262745 5262776 -22642277 + (CAG)n Simple_repeat Simple_repeat 3 33 0 4 625 180 111 0 0 chr3R 5263655 5263682 -22641371 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 625 220 220 0 0 chr3R 5264739 5264789 -22640264 + T-rich Low_complexity Low_complexity 1 50 0 4 625 414 0 0 0 chr3R 5265755 5265801 -22639252 + (TA)n Simple_repeat Simple_repeat 1 46 0 4 625 262 214 14 14 chr3R 5266719 5266790 -22638263 + (CAG)n Simple_repeat Simple_repeat 3 73 0 4 625 355 204 0 55 chr3R 5266929 5267038 -22638015 + ROO_I LTR Pao 641 743 -7513 4 625 383 194 19 10 chr3R 5267238 5267342 -22637711 + ROO_I LTR Pao 639 743 -7513 4 625 189 0 0 0 chr3R 5267918 5267939 -22637114 + (TA)n Simple_repeat Simple_repeat 1 21 0 4 625 329 62 21 0 chr3R 5268406 5268454 -22636599 + (GAGTG)n Simple_repeat Simple_repeat 4 52 0 4 625 443 74 0 14 chr3R 5273198 5273267 -22631786 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 625 278 286 11 0 chr3R 5274239 5274330 -22630723 + (TA)n Simple_repeat Simple_repeat 2 93 0 4 625 24 0 0 0 chr3R 5275188 5275212 -22629841 + AT_rich Low_complexity Low_complexity 1 24 0 4 625 195 42 0 0 chr3R 5275748 5275772 -22629281 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 4 625 183 129 0 0 chr3R 5275855 5275886 -22629167 + (CAGT)n Simple_repeat Simple_repeat 4 34 0 4 625 336 188 0 0 chr3R 5276551 5276620 -22628433 + (CAAT)n Simple_repeat Simple_repeat 1 69 0 4 625 255 140 0 0 chr3R 5276745 5276795 -22628258 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 625 24 32 0 0 chr3R 5277086 5277117 -22627936 + AT_rich Low_complexity Low_complexity 1 31 0 4 625 219 219 23 58 chr3R 5278429 5278516 -22626537 + (CATATA)n Simple_repeat Simple_repeat 4 87 0 4 625 26 0 0 0 chr3R 5278778 5278804 -22626249 + AT_rich Low_complexity Low_complexity 1 26 0 4 625 22 0 0 0 chr3R 5280136 5280158 -22624895 + AT_rich Low_complexity Low_complexity 1 22 0 4 625 22 0 0 0 chr3R 5281191 5281213 -22623840 + AT_rich Low_complexity Low_complexity 1 22 0 4 625 198 0 0 0 chr3R 5283144 5283166 -22621887 + (CATA)n Simple_repeat Simple_repeat 2 23 0 4 625 204 40 0 0 chr3R 5286914 5286939 -22618114 + (TATG)n Simple_repeat Simple_repeat 1 25 0 4 625 336 64 0 0 chr3R 5288412 5288459 -22616594 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 625 429 70 0 0 chr3R 5289054 5289111 -22615942 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 625 24 0 0 0 chr3R 5289810 5289834 -22615219 + AT_rich Low_complexity Low_complexity 1 24 0 4 625 285 118 0 0 chr3R 5293208 5293259 -22611794 + (ATTTG)n Simple_repeat Simple_repeat 4 54 0 4 625 226 198 0 102 chr3R 5293949 5294067 -22610986 - ROO_I LTR Pao -7513 743 638 4 625 324 0 0 0 chr3R 5294293 5294329 -22610724 + (CTG)n Simple_repeat Simple_repeat 3 38 0 4 625 354 222 0 0 chr3R 5295606 5295705 -22609348 - ROO_I LTR Pao -7522 734 636 4 625 322 176 0 34 chr3R 5300630 5300718 -22604335 - ROO_I LTR Pao -7531 725 641 4 625 314 233 0 40 chr3R 5300890 5300966 -22604087 - ROO_I LTR Pao -7515 741 669 4 625 345 125 0 0 chr3R 5301380 5301436 -22603617 + (CTG)n Simple_repeat Simple_repeat 3 58 0 4 625 255 164 0 0 chr3R 5304173 5304234 -22600819 + T-rich Low_complexity Low_complexity 1 61 0 4 625 314 108 0 15 chr3R 5304309 5304375 -22600678 + (TTG)n Simple_repeat Simple_repeat 3 67 0 4 625 189 107 0 0 chr3R 5304373 5304401 -22600652 + (TGG)n Simple_repeat Simple_repeat 3 30 0 4 625 348 64 0 0 chr3R 5304831 5304878 -22600175 + (ACTG)n Simple_repeat Simple_repeat 4 50 0 4 625 22 70 0 0 chr3R 5305463 5305506 -22599547 + AT_rich Low_complexity Low_complexity 1 43 0 4 625 29 0 0 0 chr3R 5306353 5306382 -22598671 + AT_rich Low_complexity Low_complexity 1 29 0 4 625 180 0 0 0 chr3R 5310640 5310660 -22594393 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 4 625 180 0 0 0 chr3R 5310788 5310808 -22594245 + (T)n Simple_repeat Simple_repeat 1 20 0 4 625 27 81 0 0 chr3R 5311065 5311127 -22593926 + AT_rich Low_complexity Low_complexity 1 62 0 4 625 233 128 0 21 chr3R 5311542 5311590 -22593463 + (TTA)n Simple_repeat Simple_repeat 2 48 0 4 625 213 108 0 0 chr3R 5311686 5311723 -22593330 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 625 22 0 0 0 chr3R 5311905 5311927 -22593126 + AT_rich Low_complexity Low_complexity 1 22 0 4 625 23 0 0 0 chr3R 5312098 5312121 -22592932 + AT_rich Low_complexity Low_complexity 1 23 0 4 625 234 265 0 0 chr3R 5312606 5312674 -22592379 + T-rich Low_complexity Low_complexity 1 68 0 4 625 241 244 0 65 chr3R 5314186 5314278 -22590775 + (CAA)n Simple_repeat Simple_repeat 3 88 0 4 625 234 0 0 0 chr3R 5314438 5314464 -22590589 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 625 309 51 0 0 chr3R 5315368 5315407 -22589646 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 625 27 0 0 0 chr3R 5317647 5317674 -22587379 + AT_rich Low_complexity Low_complexity 1 27 0 4 625 198 0 0 0 chr3R 5317820 5317842 -22587211 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 625 209 314 0 0 chr3R 5318062 5318132 -22586921 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 625 222 150 0 0 chr3R 5318357 5318397 -22586656 + (TTG)n Simple_repeat Simple_repeat 2 41 0 4 625 213 39 0 0 chr3R 5318700 5318726 -22586327 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 625 21 0 0 0 chr3R 5322875 5322896 -22582157 + AT_rich Low_complexity Low_complexity 1 21 0 4 625 21 0 0 0 chr3R 5325200 5325221 -22579832 + AT_rich Low_complexity Low_complexity 1 21 0 4 625 22 0 0 0 chr3R 5330235 5330257 -22574796 + AT_rich Low_complexity Low_complexity 1 22 0 4 625 180 0 0 0 chr3R 5334344 5334364 -22570689 + (T)n Simple_repeat Simple_repeat 1 20 0 4 625 203 0 37 0 chr3R 5334629 5334656 -22570397 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 625 24 0 0 0 chr3R 5334736 5334760 -22570293 + AT_rich Low_complexity Low_complexity 1 24 0 4 625 268 318 0 0 chr3R 5335209 5335294 -22569759 + (CCA)n Simple_repeat Simple_repeat 2 86 0 4 625 24 32 0 0 chr3R 5336326 5336357 -22568696 + AT_rich Low_complexity Low_complexity 1 31 0 4 625 22 56 0 0 chr3R 5338186 5338222 -22566831 + AT_rich Low_complexity Low_complexity 1 36 0 4 625 282 104 14 56 chr3R 5348474 5348545 -22556508 + (CAA)n Simple_repeat Simple_repeat 3 70 0 4 625 33 43 0 0 chr3R 5348905 5348952 -22556101 + AT_rich Low_complexity Low_complexity 1 47 0 4 625 215 307 0 13 chr3R 5349392 5349468 -22555585 + (CAG)n Simple_repeat Simple_repeat 2 76 0 4 625 201 238 0 0 chr3R 5355769 5355811 -22549242 + (TATG)n Simple_repeat Simple_repeat 4 45 0 4 625 21 82 0 0 chr3R 5361730 5361779 -22543274 + AT_rich Low_complexity Low_complexity 1 49 0 4 625 195 152 0 0 chr3R 5361804 5361850 -22543203 + T-rich Low_complexity Low_complexity 1 46 0 4 625 210 71 0 0 chr3R 5363563 5363591 -22541462 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 625 21 0 0 0 chr3R 5365317 5365338 -22539715 + AT_rich Low_complexity Low_complexity 1 21 0 4 625 227 246 0 0 chr3R 5366764 5366829 -22538224 + (CTG)n Simple_repeat Simple_repeat 3 67 0 4 625 230 227 15 15 chr3R 5369032 5369099 -22535954 + (TA)n Simple_repeat Simple_repeat 1 67 0 4 625 203 167 0 0 chr3R 5371444 5371480 -22533573 + GA-rich Low_complexity Low_complexity 2 37 0 4 625 333 237 0 31 chr3R 5372538 5372634 -22532419 - ROO_I LTR Pao -7518 738 646 4 625 248 192 0 27 chr3R 5372680 5372755 -22532298 - ROO_I LTR Pao -7537 719 647 4 625 273 148 18 73 chr3R 5372908 5373017 -22532036 - ROO_I LTR Pao -7513 743 641 4 625 241 309 0 0 chr3R 5373707 5373791 -22531262 + (TA)n Simple_repeat Simple_repeat 2 85 0 4 626 200 289 22 11 chr3R 5373974 5374065 -22530988 + (CATATA)n Simple_repeat Simple_repeat 4 95 0 4 626 512 232 23 23 chr3R 5374277 5374405 -22530648 - MARINA DNA Mariner -101 1166 1039 4 626 25 0 0 0 chr3R 5374982 5375007 -22530046 + AT_rich Low_complexity Low_complexity 1 25 0 4 626 191 160 0 39 chr3R 5375050 5375102 -22529951 + (TTGG)n Simple_repeat Simple_repeat 3 52 0 4 626 220 27 54 0 chr3R 5375949 5375986 -22529067 + (TTATA)n Simple_repeat Simple_repeat 5 43 0 4 626 24 32 0 0 chr3R 5376438 5376469 -22528584 + AT_rich Low_complexity Low_complexity 1 31 0 4 626 24 53 0 0 chr3R 5377610 5377648 -22527405 + AT_rich Low_complexity Low_complexity 1 38 0 4 626 24 0 0 0 chr3R 5381409 5381433 -22523620 + AT_rich Low_complexity Low_complexity 1 24 0 4 626 196 191 0 45 chr3R 5385666 5385732 -22519321 + (CAA)n Simple_repeat Simple_repeat 1 63 0 4 626 205 197 33 0 chr3R 5385880 5385941 -22519112 + (CA)n Simple_repeat Simple_repeat 1 63 0 4 626 243 292 0 19 chr3R 5386216 5386324 -22518729 + (CAG)n Simple_repeat Simple_repeat 3 108 0 4 626 23 33 0 0 chr3R 5395860 5395890 -22509163 + AT_rich Low_complexity Low_complexity 1 30 0 4 626 29 90 0 0 chr3R 5396033 5396111 -22508942 + AT_rich Low_complexity Low_complexity 1 78 0 4 626 22 56 0 0 chr3R 5399796 5399832 -22505221 + AT_rich Low_complexity Low_complexity 1 36 0 4 626 222 207 0 0 chr3R 5404282 5404340 -22500713 + GA-rich Low_complexity Low_complexity 2 59 0 4 626 24 32 0 0 chr3R 5406903 5406934 -22498119 + AT_rich Low_complexity Low_complexity 1 31 0 4 626 25 31 0 0 chr3R 5408398 5408430 -22496623 + AT_rich Low_complexity Low_complexity 1 32 0 4 626 261 145 0 0 chr3R 5409475 5409537 -22495516 + (GGA)n Simple_repeat Simple_repeat 2 63 0 4 626 24 32 0 0 chr3R 5413479 5413510 -22491543 + AT_rich Low_complexity Low_complexity 1 31 0 4 626 192 125 0 0 chr3R 5417444 5417476 -22487577 + (CAG)n Simple_repeat Simple_repeat 1 32 0 4 626 198 118 0 0 chr3R 5418884 5418918 -22486135 + (CGAAT)n Simple_repeat Simple_repeat 5 38 0 4 626 188 34 0 33 chr3R 5419176 5419206 -22485847 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 4 626 210 245 0 0 chr3R 5419575 5419628 -22485425 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 4 626 209 259 0 0 chr3R 5420542 5420600 -22484453 + (TTCGG)n Simple_repeat Simple_repeat 4 61 0 4 626 23 0 0 0 chr3R 5423325 5423348 -22481705 + AT_rich Low_complexity Low_complexity 1 23 0 4 626 21 0 0 0 chr3R 5426064 5426085 -22478968 + AT_rich Low_complexity Low_complexity 1 21 0 4 626 228 180 0 20 chr3R 5427600 5427651 -22477402 + T-rich Low_complexity Low_complexity 4 53 0 4 626 180 182 0 0 chr3R 5428021 5428065 -22476988 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 626 22 35 0 0 chr3R 5432038 5432067 -22472986 + AT_rich Low_complexity Low_complexity 1 29 0 4 626 209 206 21 35 chr3R 5432790 5432883 -22472170 + A-rich Low_complexity Low_complexity 1 91 0 4 626 204 40 0 0 chr3R 5435883 5435908 -22469145 + (A)n Simple_repeat Simple_repeat 1 25 0 4 626 238 161 141 31 chr3R 5438091 5438155 -22466898 + DNAREP1_DM LINE Penelope 1 71 -523 4 626 411 170 102 41 chr3R 5438200 5438298 -22466755 + DNAREP1_DM LINE Penelope 490 593 -1 4 626 201 39 0 0 chr3R 5438796 5438822 -22466231 + (TAAAAA)n Simple_repeat Simple_repeat 4 29 0 4 626 197 83 0 27 chr3R 5440741 5440778 -22464275 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 626 246 62 0 0 chr3R 5441921 5441953 -22463100 + (TTG)n Simple_repeat Simple_repeat 1 32 0 4 626 210 71 0 0 chr3R 5442786 5442814 -22462239 + (A)n Simple_repeat Simple_repeat 1 28 0 4 626 232 174 0 0 chr3R 5443808 5443854 -22461199 + A-rich Low_complexity Low_complexity 1 46 0 4 626 25 0 0 0 chr3R 5444842 5444867 -22460186 + AT_rich Low_complexity Low_complexity 1 25 0 4 626 24 0 0 0 chr3R 5445420 5445444 -22459609 + AT_rich Low_complexity Low_complexity 1 24 0 4 626 204 135 0 0 chr3R 5447447 5447484 -22457569 + (CAG)n Simple_repeat Simple_repeat 2 38 0 4 626 270 323 0 0 chr3R 5454825 5454955 -22450098 + CT-rich Low_complexity Low_complexity 3 132 0 4 626 201 74 0 0 chr3R 5456011 5456038 -22449015 + (TTC)n Simple_repeat Simple_repeat 1 27 0 4 626 40 0 0 0 chr3R 5456803 5456843 -22448210 + AT_rich Low_complexity Low_complexity 1 40 0 4 626 21 36 0 0 chr3R 5465020 5465048 -22440005 + AT_rich Low_complexity Low_complexity 1 28 0 4 626 189 132 0 0 chr3R 5474756 5474794 -22430259 + (GGA)n Simple_repeat Simple_repeat 2 39 0 4 626 222 128 0 0 chr3R 5474850 5474889 -22430164 + (GGGAGA)n Simple_repeat Simple_repeat 2 40 0 4 626 244 239 43 0 chr3R 5475473 5475565 -22429488 + (CATATA)n Simple_repeat Simple_repeat 2 97 0 4 626 23 78 0 0 chr3R 5476599 5476650 -22428403 + AT_rich Low_complexity Low_complexity 1 51 0 4 626 22 35 0 0 chr3R 5481255 5481284 -22423769 + AT_rich Low_complexity Low_complexity 1 29 0 4 626 228 241 83 12 chr3R 5487311 5487395 -22417658 + R1_DM LINE R1 1145 1234 -4122 4 626 192 97 0 0 chr3R 5488833 5488864 -22416189 + (GGA)n Simple_repeat Simple_repeat 3 33 0 4 627 36 23 0 0 chr3R 5512827 5512870 -22392183 + AT_rich Low_complexity Low_complexity 1 43 0 4 627 198 128 0 0 chr3R 5514188 5514227 -22390826 + (ATCTG)n Simple_repeat Simple_repeat 2 40 0 4 627 36 23 0 0 chr3R 5520147 5520190 -22384863 + AT_rich Low_complexity Low_complexity 1 43 0 4 627 198 128 0 0 chr3R 5522074 5522113 -22382940 + (ATCTG)n Simple_repeat Simple_repeat 2 40 0 4 627 262 29 57 0 chr3R 5525747 5525782 -22379271 + PROTOP_B DNA P 506 542 -611 4 627 237 273 0 0 chr3R 5526274 5526329 -22378724 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 627 198 0 0 0 chr3R 5530593 5530615 -22374438 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 627 192 163 0 0 chr3R 5531622 5531665 -22373388 + (TAA)n Simple_repeat Simple_repeat 1 43 0 4 627 22 56 0 0 chr3R 5531752 5531788 -22373265 + AT_rich Low_complexity Low_complexity 1 36 0 4 627 205 196 0 51 chr3R 5536040 5536099 -22368954 + (TATG)n Simple_repeat Simple_repeat 1 56 0 4 627 23 33 0 0 chr3R 5540356 5540386 -22364667 + AT_rich Low_complexity Low_complexity 1 30 0 4 627 22 0 0 0 chr3R 5549001 5549023 -22356030 + AT_rich Low_complexity Low_complexity 1 22 0 4 627 21 0 0 0 chr3R 5551491 5551512 -22353541 + AT_rich Low_complexity Low_complexity 1 21 0 4 627 183 184 0 0 chr3R 5552914 5552952 -22352101 + (CAGA)n Simple_repeat Simple_repeat 1 38 0 4 627 37 23 0 0 chr3R 5553814 5553858 -22351195 + AT_rich Low_complexity Low_complexity 1 44 0 4 627 605 222 0 6 chr3R 5555726 5555898 -22349155 + (CGGA)n Simple_repeat Simple_repeat 4 174 0 4 627 27 62 0 0 chr3R 5559716 5559764 -22345289 + AT_rich Low_complexity Low_complexity 1 48 0 4 627 22 0 0 0 chr3R 5561996 5562018 -22343035 + AT_rich Low_complexity Low_complexity 1 22 0 4 627 210 150 0 0 chr3R 5564753 5564793 -22340260 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 627 21 0 0 0 chr3R 5565590 5565611 -22339442 + AT_rich Low_complexity Low_complexity 1 21 0 4 627 21 36 0 0 chr3R 5579503 5579531 -22325522 + AT_rich Low_complexity Low_complexity 1 28 0 4 627 25 0 0 0 chr3R 5585245 5585270 -22319783 + AT_rich Low_complexity Low_complexity 1 25 0 4 627 636 14 0 0 chr3R 5587602 5587675 -22317378 + (TA)n Simple_repeat Simple_repeat 1 73 0 4 627 22 0 0 0 chr3R 5597566 5597588 -22307465 + AT_rich Low_complexity Low_complexity 1 22 0 4 627 243 157 0 0 chr3R 5606188 5606239 -22298814 + (CAA)n Simple_repeat Simple_repeat 1 51 0 4 627 182 37 37 0 chr3R 5610831 5610858 -22294195 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 627 210 91 0 0 chr3R 5612456 5612489 -22292564 + (GAA)n Simple_repeat Simple_repeat 2 34 0 4 627 237 94 36 36 chr3R 5612744 5612799 -22292254 + (CACAC)n Simple_repeat Simple_repeat 5 59 0 4 627 202 135 0 26 chr3R 5613802 5613840 -22291213 + (TATG)n Simple_repeat Simple_repeat 2 38 0 4 627 242 194 16 16 chr3R 5614644 5614707 -22290346 + (TA)n Simple_repeat Simple_repeat 2 64 0 4 627 22 0 0 0 chr3R 5614796 5614818 -22290235 + AT_rich Low_complexity Low_complexity 1 22 0 4 627 24 0 0 0 chr3R 5615009 5615033 -22290020 + AT_rich Low_complexity Low_complexity 1 24 0 4 627 23 97 0 0 chr3R 5620593 5620665 -22284388 + AT_rich Low_complexity Low_complexity 1 72 0 4 627 22 0 0 0 chr3R 5623261 5623283 -22281770 + AT_rich Low_complexity Low_complexity 1 22 0 4 627 29 28 0 0 chr3R 5626877 5626913 -22278140 + AT_rich Low_complexity Low_complexity 1 36 0 4 627 279 0 0 0 chr3R 5629878 5629909 -22275144 + (TA)n Simple_repeat Simple_repeat 1 31 0 4 627 44 0 0 0 chr3R 5630747 5630791 -22274262 + AT_rich Low_complexity Low_complexity 1 44 0 4 627 249 247 0 0 chr3R 5633606 5633683 -22271370 + GA-rich Low_complexity Low_complexity 1 77 0 4 627 210 310 10 0 chr3R 5634099 5634199 -22270854 + (CTG)n Simple_repeat Simple_repeat 3 103 0 4 628 192 135 0 0 chr3R 5637042 5637079 -22267974 + (CCA)n Simple_repeat Simple_repeat 2 38 0 4 628 22 56 0 0 chr3R 5643811 5643847 -22261206 + AT_rich Low_complexity Low_complexity 1 36 0 4 628 317 62 21 0 chr3R 5647264 5647312 -22257741 + (TTGG)n Simple_repeat Simple_repeat 2 50 0 4 628 23 54 0 0 chr3R 5648030 5648067 -22256986 + AT_rich Low_complexity Low_complexity 1 37 0 4 628 198 71 0 0 chr3R 5651521 5651549 -22253504 + (CATTT)n Simple_repeat Simple_repeat 3 30 0 4 628 228 135 0 0 chr3R 5652084 5652121 -22252932 + (TAA)n Simple_repeat Simple_repeat 3 39 0 4 628 198 91 0 0 chr3R 5652874 5652907 -22252146 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 628 183 42 0 0 chr3R 5653577 5653601 -22251452 + (T)n Simple_repeat Simple_repeat 1 24 0 4 628 221 270 16 0 chr3R 5653920 5653983 -22251070 + (CATATA)n Simple_repeat Simple_repeat 6 69 0 4 628 180 0 0 0 chr3R 5658822 5658842 -22246211 + (A)n Simple_repeat Simple_repeat 1 20 0 4 628 22 56 0 0 chr3R 5660166 5660202 -22244851 + AT_rich Low_complexity Low_complexity 1 36 0 4 628 183 80 0 0 chr3R 5661250 5661275 -22243778 + (CTG)n Simple_repeat Simple_repeat 1 25 0 4 628 22 0 0 0 chr3R 5661295 5661317 -22243736 + AT_rich Low_complexity Low_complexity 1 22 0 4 628 249 33 0 0 chr3R 5661686 5661716 -22243337 + (CCA)n Simple_repeat Simple_repeat 3 32 0 4 628 213 195 0 0 chr3R 5663222 5663263 -22241790 + (CATCC)n Simple_repeat Simple_repeat 3 43 0 4 628 423 100 0 0 chr3R 5663900 5663970 -22241083 + (TAA)n Simple_repeat Simple_repeat 3 72 0 4 628 3149 20 0 0 chr3R 5663970 5664326 -22240727 + MDG1_LTR LTR Gypsy 87 442 0 4 628 42494 5 14 5 chr3R 5664326 5670807 -22234246 + MDG1_I LTR Gypsy 1 6596 0 4 628 423 100 0 0 chr3R 5670823 5670893 -22234160 + (TAA)n Simple_repeat Simple_repeat 3 72 0 4 628 3161 20 0 0 chr3R 5670893 5671249 -22233804 + MDG1_LTR LTR Gypsy 87 442 0 4 628 188 67 33 0 chr3R 5671265 5671295 -22233758 + (TA)n Simple_repeat Simple_repeat 1 31 0 4 628 2239 19 7 11 chr3R 5671295 5671567 -22233486 - BLASTOPIA_LTR LTR Gypsy -4 271 1 4 628 41589 1 1 0 chr3R 5671567 5676044 -22229009 - BLASTOPIA_I LTR Gypsy 0 4481 1 4 628 2238 19 7 11 chr3R 5676044 5676316 -22228737 - BLASTOPIA_LTR LTR Gypsy 0 275 5 4 628 236 77 26 0 chr3R 5676316 5676355 -22228698 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 628 228 86 0 0 chr3R 5676819 5676854 -22228199 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 628 294 73 0 0 chr3R 5677251 5677292 -22227761 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 628 335 153 42 0 chr3R 5677759 5677831 -22227222 + (CATATA)n Simple_repeat Simple_repeat 4 78 0 4 628 23 0 0 0 chr3R 5678550 5678573 -22226480 + AT_rich Low_complexity Low_complexity 1 23 0 4 628 268 83 42 0 chr3R 5678755 5678803 -22226250 + (GATTG)n Simple_repeat Simple_repeat 2 51 0 4 628 224 314 0 0 chr3R 5679519 5679589 -22225464 + (CAGT)n Simple_repeat Simple_repeat 2 71 0 4 628 189 0 0 0 chr3R 5683024 5683045 -22222008 + (TCC)n Simple_repeat Simple_repeat 3 23 0 4 628 25 0 0 0 chr3R 5683139 5683164 -22221889 + AT_rich Low_complexity Low_complexity 1 25 0 4 628 24 67 0 0 chr3R 5683654 5683699 -22221354 + AT_rich Low_complexity Low_complexity 1 45 0 4 628 216 0 0 0 chr3R 5687351 5687375 -22217678 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 628 30 0 0 0 chr3R 5689341 5689371 -22215682 + AT_rich Low_complexity Low_complexity 1 30 0 4 628 201 143 0 0 chr3R 5689739 5689774 -22215279 + (GGAGAA)n Simple_repeat Simple_repeat 6 40 0 4 628 198 0 0 0 chr3R 5690303 5690325 -22214728 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 628 22 0 0 0 chr3R 5690528 5690550 -22214503 + AT_rich Low_complexity Low_complexity 1 22 0 4 628 410 120 0 13 chr3R 5691483 5691559 -22213494 + (CTG)n Simple_repeat Simple_repeat 2 76 0 4 628 207 211 0 17 chr3R 5691806 5691864 -22213189 + GA-rich Low_complexity Low_complexity 2 58 0 4 628 219 189 0 0 chr3R 5691901 5691954 -22213099 + GA-rich Low_complexity Low_complexity 2 54 0 4 628 29 0 0 0 chr3R 5692609 5692638 -22212415 + AT_rich Low_complexity Low_complexity 1 29 0 4 628 198 171 0 0 chr3R 5693323 5693364 -22211689 + A-rich Low_complexity Low_complexity 1 41 0 4 628 236 192 0 19 chr3R 5694044 5694097 -22210956 + GA-rich Low_complexity Low_complexity 2 53 0 4 628 32 43 0 0 chr3R 5694189 5694235 -22210818 + AT_rich Low_complexity Low_complexity 1 46 0 4 628 239 122 122 0 chr3R 5695041 5695082 -22209971 - DNAREP1_DM LINE Penelope -108 486 441 4 628 325 276 0 116 chr3R 5695073 5695237 -22209816 - DNAREP1_DM LINE Penelope -392 202 58 4 628 200 43 64 21 chr3R 5695304 5695351 -22209702 + (TTA)n Simple_repeat Simple_repeat 2 50 0 4 628 210 162 0 0 chr3R 5696749 5696786 -22208267 + A-rich Low_complexity Low_complexity 1 37 0 4 628 189 0 0 0 chr3R 5700333 5700354 -22204699 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 628 236 140 40 0 chr3R 5700682 5700732 -22204321 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 628 258 167 0 0 chr3R 5702147 5702207 -22202846 + (CAT)n Simple_repeat Simple_repeat 3 62 0 4 628 264 120 0 0 chr3R 5709192 5709242 -22195811 + (TTCA)n Simple_repeat Simple_repeat 2 51 0 4 628 186 103 0 0 chr3R 5709279 5709308 -22195745 + (A)n Simple_repeat Simple_repeat 1 29 0 4 628 192 125 0 0 chr3R 5711684 5711716 -22193337 + (T)n Simple_repeat Simple_repeat 1 32 0 4 628 326 129 0 16 chr3R 5715046 5715109 -22189944 + (CAG)n Simple_repeat Simple_repeat 1 62 0 4 628 197 159 23 0 chr3R 5716813 5716857 -22188196 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 628 21 0 0 0 chr3R 5717568 5717589 -22187464 + AT_rich Low_complexity Low_complexity 1 21 0 4 628 25 0 0 0 chr3R 5719116 5719141 -22185912 + AT_rich Low_complexity Low_complexity 1 25 0 4 628 25 31 0 0 chr3R 5719225 5719257 -22185796 + AT_rich Low_complexity Low_complexity 1 32 0 4 628 238 178 0 0 chr3R 5719497 5719542 -22185511 + (CCCA)n Simple_repeat Simple_repeat 2 46 0 4 628 189 0 0 0 chr3R 5719912 5719933 -22185120 + (TTG)n Simple_repeat Simple_repeat 1 21 0 4 628 201 154 0 0 chr3R 5721737 5721776 -22183277 + A-rich Low_complexity Low_complexity 1 39 0 4 628 26 30 0 0 chr3R 5723597 5723630 -22181423 + AT_rich Low_complexity Low_complexity 1 33 0 4 628 213 108 0 0 chr3R 5724206 5724243 -22180810 + (T)n Simple_repeat Simple_repeat 1 37 0 4 628 189 0 0 0 chr3R 5726863 5726884 -22178169 + (A)n Simple_repeat Simple_repeat 1 21 0 4 628 242 260 0 0 chr3R 5727422 5727472 -22177581 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 628 243 103 0 0 chr3R 5728325 5728364 -22176689 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 628 249 163 0 0 chr3R 5731264 5731313 -22173740 + A-rich Low_complexity Low_complexity 1 49 0 4 628 186 150 0 0 chr3R 5731720 5731760 -22173293 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 628 270 0 0 0 chr3R 5732020 5732050 -22173003 + (CGGT)n Simple_repeat Simple_repeat 1 30 0 4 628 202 279 0 14 chr3R 5732995 5733064 -22171989 + (CAA)n Simple_repeat Simple_repeat 1 68 0 4 628 23 0 0 0 chr3R 5735587 5735610 -22169443 + AT_rich Low_complexity Low_complexity 1 23 0 4 628 274 298 0 0 chr3R 5736979 5737073 -22167980 + (TTG)n Simple_repeat Simple_repeat 1 94 0 4 628 183 156 0 0 chr3R 5742023 5742055 -22162998 + T-rich Low_complexity Low_complexity 1 32 0 4 628 237 33 0 0 chr3R 5743311 5743341 -22161712 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 4 628 345 82 0 0 chr3R 5747339 5747388 -22157665 + (CACTC)n Simple_repeat Simple_repeat 4 52 0 4 628 228 67 0 0 chr3R 5747395 5747425 -22157628 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 4 628 189 0 0 0 chr3R 5749468 5749489 -22155564 + (T)n Simple_repeat Simple_repeat 1 21 0 4 628 26 30 0 0 chr3R 5751798 5751831 -22153222 + AT_rich Low_complexity Low_complexity 1 33 0 4 628 225 0 0 0 chr3R 5752615 5752640 -22152413 + (A)n Simple_repeat Simple_repeat 1 25 0 4 628 186 118 0 0 chr3R 5757400 5757434 -22147619 + (TAA)n Simple_repeat Simple_repeat 3 36 0 4 628 252 170 0 0 chr3R 5758181 5758234 -22146819 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 628 21 0 0 0 chr3R 5758540 5758561 -22146492 + AT_rich Low_complexity Low_complexity 1 21 0 4 628 215 232 0 0 chr3R 5758788 5758844 -22146209 + A-rich Low_complexity Low_complexity 1 56 0 4 628 263 209 15 15 chr3R 5759108 5759176 -22145877 + (TTG)n Simple_repeat Simple_repeat 1 68 0 4 628 22 0 0 0 chr3R 5759381 5759403 -22145650 + AT_rich Low_complexity Low_complexity 1 22 0 4 628 207 114 0 0 chr3R 5759885 5759920 -22145133 + (T)n Simple_repeat Simple_repeat 1 35 0 4 628 189 0 0 0 chr3R 5759975 5759996 -22145057 + (CTG)n Simple_repeat Simple_repeat 1 21 0 4 628 216 97 0 0 chr3R 5760426 5760457 -22144596 + (CATAC)n Simple_repeat Simple_repeat 3 33 0 4 628 212 100 25 0 chr3R 5761427 5761467 -22143586 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 628 237 234 0 0 chr3R 5764120 5764184 -22140869 + (CAACT)n Simple_repeat Simple_repeat 4 67 0 4 628 26 0 0 0 chr3R 5765802 5765828 -22139225 + AT_rich Low_complexity Low_complexity 1 26 0 4 628 267 54 0 0 chr3R 5766958 5766995 -22138058 + (T)n Simple_repeat Simple_repeat 1 37 0 4 629 23 0 0 0 chr3R 5769140 5769163 -22135890 + AT_rich Low_complexity Low_complexity 1 23 0 4 629 206 81 27 0 chr3R 5769983 5770020 -22135033 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 629 305 94 0 36 chr3R 5770889 5770944 -22134109 + (TAAAAA)n Simple_repeat Simple_repeat 2 54 0 4 629 324 127 0 0 chr3R 5771174 5771229 -22133824 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 4 629 213 170 0 54 chr3R 5772550 5772606 -22132447 + G-rich Low_complexity Low_complexity 2 54 0 4 629 28 0 0 0 chr3R 5772806 5772834 -22132219 + AT_rich Low_complexity Low_complexity 1 28 0 4 629 207 0 0 0 chr3R 5772846 5772869 -22132184 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 629 189 107 0 0 chr3R 5774509 5774537 -22130516 + (CGAAA)n Simple_repeat Simple_repeat 5 32 0 4 629 213 39 0 0 chr3R 5775599 5775625 -22129428 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 629 189 107 0 0 chr3R 5775767 5775795 -22129258 + (TC)n Simple_repeat Simple_repeat 2 29 0 4 629 201 152 0 0 chr3R 5778528 5778561 -22126492 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 629 387 56 0 0 chr3R 5778618 5778672 -22126381 + (TTTCC)n Simple_repeat Simple_repeat 4 57 0 4 629 270 0 0 0 chr3R 5778774 5778804 -22126249 + (TC)n Simple_repeat Simple_repeat 2 31 0 4 629 22 35 0 0 chr3R 5780383 5780412 -22124641 + AT_rich Low_complexity Low_complexity 1 29 0 4 629 237 33 0 0 chr3R 5782226 5782256 -22122797 + (A)n Simple_repeat Simple_repeat 1 30 0 4 629 26 30 0 0 chr3R 5782415 5782448 -22122605 + AT_rich Low_complexity Low_complexity 1 33 0 4 629 183 80 0 0 chr3R 5783573 5783598 -22121455 + (CTG)n Simple_repeat Simple_repeat 2 26 0 4 629 270 56 0 0 chr3R 5784377 5784413 -22120640 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 629 333 125 0 0 chr3R 5785969 5786025 -22119028 + (TC)n Simple_repeat Simple_repeat 2 57 0 4 629 252 167 0 0 chr3R 5786861 5786909 -22118144 + (CTG)n Simple_repeat Simple_repeat 3 50 0 4 629 192 250 0 0 chr3R 5787244 5787308 -22117745 + (CGGA)n Simple_repeat Simple_repeat 1 64 0 4 629 28 29 0 0 chr3R 5789075 5789110 -22115943 + AT_rich Low_complexity Low_complexity 1 35 0 4 629 231 235 0 0 chr3R 5789257 5789308 -22115745 + T-rich Low_complexity Low_complexity 1 51 0 4 629 219 88 0 0 chr3R 5789474 5789508 -22115545 + (GGA)n Simple_repeat Simple_repeat 1 34 0 4 629 205 156 0 0 chr3R 5789656 5789688 -22115365 + (TCG)n Simple_repeat Simple_repeat 2 33 0 4 629 180 182 0 0 chr3R 5790437 5790481 -22114572 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 4 629 219 139 0 0 chr3R 5792582 5792618 -22112435 + (CCGAA)n Simple_repeat Simple_repeat 4 39 0 4 629 219 36 0 0 chr3R 5793542 5793570 -22111483 + (T)n Simple_repeat Simple_repeat 1 28 0 4 629 23 33 0 0 chr3R 5794799 5794829 -22110224 + AT_rich Low_complexity Low_complexity 1 30 0 4 629 191 136 0 43 chr3R 5795330 5795376 -22109677 + (TATAG)n Simple_repeat Simple_repeat 2 45 0 4 629 200 270 13 26 chr3R 5795376 5795452 -22109601 + A-rich Low_complexity Low_complexity 5 79 0 4 629 21 36 0 0 chr3R 5797929 5797957 -22107096 + AT_rich Low_complexity Low_complexity 1 28 0 4 629 201 74 0 0 chr3R 5802894 5802921 -22102132 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 629 288 0 0 0 chr3R 5805278 5805310 -22099743 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 629 189 74 0 0 chr3R 5807579 5807606 -22097447 + (CAGC)n Simple_repeat Simple_repeat 1 27 0 4 629 24 0 0 0 chr3R 5807908 5807932 -22097121 + AT_rich Low_complexity Low_complexity 1 24 0 4 629 198 0 0 0 chr3R 5808593 5808615 -22096438 + (TA)n Simple_repeat Simple_repeat 1 22 0 4 629 222 176 0 0 chr3R 5811497 5811548 -22093505 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 629 292 196 19 76 chr3R 5812971 5813076 -22091977 + ROO_I LTR Pao 640 738 -7518 4 629 254 163 11 11 chr3R 5813086 5813173 -22091880 + ROO_I LTR Pao 643 729 -7527 4 629 221 256 7 74 chr3R 5813215 5813350 -22091703 + (CAG)n Simple_repeat Simple_repeat 3 128 0 4 629 239 238 0 36 chr3R 5813567 5813650 -22091403 + ROO_I LTR Pao 646 725 -7531 4 629 219 289 0 0 chr3R 5813944 5814048 -22091005 + GA-rich Low_complexity Low_complexity 1 104 0 4 629 270 56 0 0 chr3R 5814395 5814431 -22090622 + (TTA)n Simple_repeat Simple_repeat 2 37 0 4 629 198 0 0 0 chr3R 5814442 5814464 -22090589 + (CATATA)n Simple_repeat Simple_repeat 2 23 0 4 629 216 257 14 28 chr3R 5814735 5814792 -22090261 + A-rich Low_complexity Low_complexity 3 60 0 4 629 180 0 0 0 chr3R 5814792 5814812 -22090241 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 4 629 216 257 14 28 chr3R 5814812 5814826 -22090227 + A-rich Low_complexity Low_complexity 61 73 0 4 629 323 154 0 15 chr3R 5815343 5815409 -22089644 + (CAAA)n Simple_repeat Simple_repeat 2 66 0 4 629 215 31 31 0 chr3R 5816239 5816271 -22088782 + (CAA)n Simple_repeat Simple_repeat 2 34 0 4 629 25 51 0 0 chr3R 5816921 5816960 -22088093 + AT_rich Low_complexity Low_complexity 1 39 0 4 629 206 182 15 0 chr3R 5817982 5818048 -22087005 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 629 183 129 0 0 chr3R 5818502 5818533 -22086520 + (A)n Simple_repeat Simple_repeat 1 31 0 4 629 21 36 0 0 chr3R 5818680 5818708 -22086345 + AT_rich Low_complexity Low_complexity 1 28 0 4 629 264 100 0 0 chr3R 5819179 5819219 -22085834 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 629 215 103 0 25 chr3R 5819868 5819908 -22085145 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 629 222 37 0 0 chr3R 5835190 5835217 -22069836 + (TTGG)n Simple_repeat Simple_repeat 4 30 0 4 629 186 43 0 0 chr3R 5845193 5845216 -22059837 + (TATG)n Simple_repeat Simple_repeat 2 24 0 4 629 283 194 9 9 chr3R 5846980 5847089 -22057964 + (CTG)n Simple_repeat Simple_repeat 1 109 0 4 629 24 0 0 0 chr3R 5847196 5847220 -22057833 + AT_rich Low_complexity Low_complexity 1 24 0 4 629 22 70 0 0 chr3R 5848362 5848405 -22056648 + AT_rich Low_complexity Low_complexity 1 43 0 4 629 22 0 0 0 chr3R 5850807 5850829 -22054224 + AT_rich Low_complexity Low_complexity 1 22 0 4 629 26 0 0 0 chr3R 5851659 5851685 -22053368 + AT_rich Low_complexity Low_complexity 1 26 0 4 629 22 0 0 0 chr3R 5852784 5852806 -22052247 + AT_rich Low_complexity Low_complexity 1 22 0 4 629 21 36 0 0 chr3R 5854215 5854243 -22050810 + AT_rich Low_complexity Low_complexity 1 28 0 4 629 183 139 0 0 chr3R 5854724 5854760 -22050293 + (CAA)n Simple_repeat Simple_repeat 1 36 0 4 629 288 0 0 0 chr3R 5861068 5861100 -22043953 + (GA)n Simple_repeat Simple_repeat 2 33 0 4 629 23 0 0 0 chr3R 5867226 5867249 -22037804 + AT_rich Low_complexity Low_complexity 1 23 0 4 629 231 218 0 0 chr3R 5868165 5868220 -22036833 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 629 31 68 0 0 chr3R 5868773 5868832 -22036221 + AT_rich Low_complexity Low_complexity 1 59 0 4 629 24 67 0 0 chr3R 5873827 5873872 -22031181 + AT_rich Low_complexity Low_complexity 1 45 0 4 629 188 88 0 56 chr3R 5885172 5885208 -22019845 + (CATATA)n Simple_repeat Simple_repeat 3 36 0 4 629 1112 170 0 0 chr3R 5889153 5889353 -22015700 - XDMR Unknown Unknown -161 200 1 4 629 810 161 76 27 chr3R 5889376 5889561 -22015492 - XDMR Unknown Unknown -19 342 149 4 629 38 0 0 0 chr3R 5891290 5891328 -22013725 + AT_rich Low_complexity Low_complexity 1 38 0 4 629 23 0 0 0 chr3R 5892754 5892777 -22012276 + AT_rich Low_complexity Low_complexity 1 23 0 4 629 25 51 0 0 chr3R 5892846 5892885 -22012168 + AT_rich Low_complexity Low_complexity 1 39 0 4 629 27 29 0 0 chr3R 5893285 5893319 -22011734 + AT_rich Low_complexity Low_complexity 1 34 0 4 629 25 51 0 0 chr3R 5893464 5893503 -22011550 + AT_rich Low_complexity Low_complexity 1 39 0 4 629 25 51 0 0 chr3R 5895439 5895478 -22009575 + AT_rich Low_complexity Low_complexity 1 39 0 4 629 32 0 0 0 chr3R 5896668 5896700 -22008353 + AT_rich Low_complexity Low_complexity 1 32 0 4 629 192 40 0 0 chr3R 5896707 5896732 -22008321 + (TA)n Simple_repeat Simple_repeat 2 26 0 4 629 235 258 0 0 chr3R 5896920 5896982 -22008071 + C-rich Low_complexity Low_complexity 61 122 0 4 630 29 0 0 0 chr3R 5899686 5899715 -22005338 + AT_rich Low_complexity Low_complexity 1 29 0 4 630 29 60 0 0 chr3R 5902367 5902417 -22002636 + AT_rich Low_complexity Low_complexity 1 50 0 4 630 216 149 0 0 chr3R 5903384 5903431 -22001622 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 630 231 125 0 0 chr3R 5904774 5904814 -22000239 + (GAAAA)n Simple_repeat Simple_repeat 3 42 0 4 630 220 224 0 0 chr3R 5904909 5904958 -22000095 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 630 282 87 0 0 chr3R 5905226 5905272 -21999781 + (TC)n Simple_repeat Simple_repeat 2 47 0 4 630 21 0 0 0 chr3R 5907126 5907147 -21997906 + AT_rich Low_complexity Low_complexity 1 21 0 4 630 222 37 0 0 chr3R 5910968 5910995 -21994058 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 630 225 0 0 0 chr3R 5913011 5913036 -21992017 + (TC)n Simple_repeat Simple_repeat 1 25 0 4 630 219 69 0 0 chr3R 5915867 5915896 -21989157 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 630 210 191 0 0 chr3R 5916063 5916105 -21988948 + (TATG)n Simple_repeat Simple_repeat 2 43 0 4 630 213 39 0 0 chr3R 5922761 5922787 -21982266 + (CCTG)n Simple_repeat Simple_repeat 4 29 0 4 630 35 0 0 0 chr3R 5927162 5927197 -21977856 + AT_rich Low_complexity Low_complexity 1 35 0 4 630 24 0 0 0 chr3R 5927229 5927253 -21977800 + AT_rich Low_complexity Low_complexity 1 24 0 4 630 22 56 0 0 chr3R 5927712 5927748 -21977305 + AT_rich Low_complexity Low_complexity 1 36 0 4 630 219 157 0 0 chr3R 5928542 5928593 -21976460 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 630 185 43 41 61 chr3R 5928754 5928803 -21976250 + (TTGTG)n Simple_repeat Simple_repeat 5 52 0 4 630 257 270 22 11 chr3R 5929031 5929121 -21975932 + (CTG)n Simple_repeat Simple_repeat 1 91 0 4 630 27 49 0 0 chr3R 5929587 5929628 -21975425 + AT_rich Low_complexity Low_complexity 1 41 0 4 630 208 207 17 17 chr3R 5933202 5933261 -21971792 + (TTG)n Simple_repeat Simple_repeat 1 59 0 4 630 239 203 16 0 chr3R 5934183 5934247 -21970806 + (TGG)n Simple_repeat Simple_repeat 1 65 0 4 630 29 28 0 0 chr3R 5937784 5937820 -21967233 + AT_rich Low_complexity Low_complexity 1 36 0 4 630 222 208 0 40 chr3R 5938165 5938240 -21966813 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 630 24 0 0 0 chr3R 5940132 5940156 -21964897 + AT_rich Low_complexity Low_complexity 1 24 0 4 630 26 30 0 0 chr3R 5947264 5947297 -21957756 + AT_rich Low_complexity Low_complexity 1 33 0 4 630 22 35 0 0 chr3R 5948110 5948139 -21956914 + AT_rich Low_complexity Low_complexity 1 29 0 4 630 24 0 0 0 chr3R 5951001 5951025 -21954028 + AT_rich Low_complexity Low_complexity 1 24 0 4 630 24 53 0 0 chr3R 5955939 5955977 -21949076 + AT_rich Low_complexity Low_complexity 1 38 0 4 630 218 203 0 48 chr3R 5958987 5959049 -21946004 + (CAA)n Simple_repeat Simple_repeat 2 60 0 4 630 21 36 0 0 chr3R 5961683 5961711 -21943342 + AT_rich Low_complexity Low_complexity 1 28 0 4 630 49 43 0 0 chr3R 5961950 5962020 -21943033 + AT_rich Low_complexity Low_complexity 1 70 0 4 630 203 171 0 0 chr3R 5964782 5964817 -21940236 + GA-rich Low_complexity Low_complexity 1 35 0 4 630 35 0 0 0 chr3R 5970023 5970058 -21934995 + AT_rich Low_complexity Low_complexity 1 35 0 4 630 240 220 17 0 chr3R 5970815 5970874 -21934179 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 630 207 170 0 0 chr3R 5971287 5971334 -21933719 + (GATTG)n Simple_repeat Simple_repeat 5 51 0 4 630 846 130 60 33 chr3R 5977815 5977966 -21927087 - DNAREP1_DM LINE Penelope -439 155 1 4 630 23 54 0 0 chr3R 5978640 5978677 -21926376 + AT_rich Low_complexity Low_complexity 1 37 0 4 630 24 67 0 0 chr3R 5988298 5988343 -21916710 + AT_rich Low_complexity Low_complexity 1 45 0 4 630 24 96 0 0 chr3R 5988499 5988572 -21916481 + AT_rich Low_complexity Low_complexity 1 73 0 4 630 24 0 0 0 chr3R 5994318 5994342 -21910711 + AT_rich Low_complexity Low_complexity 1 24 0 4 630 203 118 0 73 chr3R 5996401 5996456 -21908597 + (TAA)n Simple_repeat Simple_repeat 2 52 0 4 630 24 0 0 0 chr3R 5996474 5996498 -21908555 + AT_rich Low_complexity Low_complexity 1 24 0 4 630 23 54 0 0 chr3R 5996886 5996923 -21908130 + AT_rich Low_complexity Low_complexity 1 37 0 4 630 21 0 0 0 chr3R 5996988 5997009 -21908044 + AT_rich Low_complexity Low_complexity 1 21 0 4 630 279 0 0 0 chr3R 5997775 5997806 -21907247 + (TA)n Simple_repeat Simple_repeat 1 31 0 4 630 21 0 0 0 chr3R 6005502 6005523 -21899530 + AT_rich Low_complexity Low_complexity 1 21 0 4 630 21 71 0 0 chr3R 6009998 6010040 -21895013 + AT_rich Low_complexity Low_complexity 1 42 0 4 630 21 0 0 0 chr3R 6011677 6011698 -21893355 + AT_rich Low_complexity Low_complexity 1 21 0 4 630 21 36 0 0 chr3R 6015829 6015857 -21889196 + AT_rich Low_complexity Low_complexity 1 28 0 4 630 236 161 16 0 chr3R 6016730 6016792 -21888261 + (TG)n Simple_repeat Simple_repeat 1 63 0 4 630 226 222 0 0 chr3R 6019055 6019100 -21885953 + (TCCA)n Simple_repeat Simple_repeat 2 46 0 4 630 26 82 0 0 chr3R 6019479 6019540 -21885513 + AT_rich Low_complexity Low_complexity 1 61 0 4 630 22 0 0 0 chr3R 6022142 6022164 -21882889 + AT_rich Low_complexity Low_complexity 1 22 0 4 630 3368 5 7 7 chr3R 6022728 6023142 -21881911 + DM297_LTR LTR Gypsy 1 414 0 4 630 37582 7 2 0 chr3R 6023142 6027676 -21877377 + DM297_I LTR Gypsy 1 4540 -1627 4 630 4599 12 0 0 chr3R 6027658 6028244 -21876809 + DM297_I LTR Gypsy 5582 6167 0 4 630 3368 5 7 7 chr3R 6028244 6028658 -21876395 + DM297_LTR LTR Gypsy 1 414 0 4 630 186 209 0 0 chr3R 6028902 6028945 -21876108 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 4 631 22 35 0 0 chr3R 6030711 6030740 -21874313 + AT_rich Low_complexity Low_complexity 1 29 0 4 631 23 33 0 0 chr3R 6033708 6033738 -21871315 + AT_rich Low_complexity Low_complexity 1 30 0 4 631 21 0 0 0 chr3R 6038214 6038235 -21866818 + AT_rich Low_complexity Low_complexity 1 21 0 4 631 29 47 0 0 chr3R 6039338 6039381 -21865672 + AT_rich Low_complexity Low_complexity 1 43 0 4 631 22 35 0 0 chr3R 6040391 6040420 -21864633 + AT_rich Low_complexity Low_complexity 1 29 0 4 631 21 57 0 0 chr3R 6042362 6042397 -21862656 + AT_rich Low_complexity Low_complexity 1 35 0 4 631 27 29 0 0 chr3R 6042466 6042500 -21862553 + AT_rich Low_complexity Low_complexity 1 34 0 4 631 28 0 0 0 chr3R 6045312 6045340 -21859713 + AT_rich Low_complexity Low_complexity 1 28 0 4 631 25 65 0 0 chr3R 6046317 6046363 -21858690 + AT_rich Low_complexity Low_complexity 1 46 0 4 631 213 39 0 0 chr3R 6048038 6048064 -21856989 + (TA)n Simple_repeat Simple_repeat 1 26 0 4 631 21 0 0 0 chr3R 6052859 6052880 -21852173 + AT_rich Low_complexity Low_complexity 1 21 0 4 631 227 274 0 36 chr3R 6054430 6054570 -21850483 + (CAA)n Simple_repeat Simple_repeat 1 135 0 4 631 291 71 0 0 chr3R 6054862 6054904 -21850149 + (TC)n Simple_repeat Simple_repeat 2 43 0 4 631 213 216 20 0 chr3R 6055318 6055369 -21849684 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 631 2426 8 0 0 chr3R 6057558 6057825 -21847228 - MDG3_LTR LTR Gypsy 0 267 1 4 631 45693 1 0 0 chr3R 6057825 6062812 -21842241 - MDG3_I LTR Gypsy 0 4986 1 4 631 2426 8 0 0 chr3R 6062811 6063078 -21841975 - MDG3_LTR LTR Gypsy 0 267 1 4 631 23 33 0 0 chr3R 6065062 6065092 -21839961 + AT_rich Low_complexity Low_complexity 1 30 0 4 631 21 0 0 0 chr3R 6076893 6076914 -21828139 + AT_rich Low_complexity Low_complexity 1 21 0 4 631 23 54 0 0 chr3R 6080976 6081013 -21824040 + AT_rich Low_complexity Low_complexity 1 37 0 4 631 16974 6 2 1 chr3R 6081130 6083117 -21821936 - I_DM LINE I -4136 2095 106 4 631 30046 2 1 0 chr3R 6083117 6086524 -21818529 + I_DM LINE I 2066 5473 -758 4 631 36 40 0 0 chr3R 6087743 6087793 -21817260 + AT_rich Low_complexity Low_complexity 1 50 0 4 631 228 159 23 0 chr3R 6090484 6090528 -21814525 + (CAG)n Simple_repeat Simple_repeat 2 46 0 4 631 240 185 0 0 chr3R 6093034 6093088 -21811965 + CT-rich Low_complexity Low_complexity 1 54 0 4 631 23 0 0 0 chr3R 6094970 6094993 -21810060 + AT_rich Low_complexity Low_complexity 1 23 0 4 631 23 33 0 0 chr3R 6095341 6095371 -21809682 + AT_rich Low_complexity Low_complexity 1 30 0 4 631 341 156 13 0 chr3R 6097374 6097451 -21807602 + (TA)n Simple_repeat Simple_repeat 2 79 0 4 631 23 33 0 0 chr3R 6097480 6097510 -21807543 + AT_rich Low_complexity Low_complexity 1 30 0 4 631 36 0 0 0 chr3R 6100660 6100696 -21804357 + AT_rich Low_complexity Low_complexity 1 36 0 4 631 210 233 0 0 chr3R 6101643 6101703 -21803350 + (TCTCTG)n Simple_repeat Simple_repeat 1 60 0 4 631 180 77 0 0 chr3R 6104179 6104205 -21800848 + (T)n Simple_repeat Simple_repeat 1 26 0 4 631 207 208 0 19 chr3R 6106726 6106780 -21798273 + (TTG)n Simple_repeat Simple_repeat 2 54 0 4 631 207 0 0 0 chr3R 6108009 6108032 -21797021 + (T)n Simple_repeat Simple_repeat 1 23 0 4 631 210 191 0 0 chr3R 6108811 6108853 -21796200 + (CAT)n Simple_repeat Simple_repeat 2 43 0 4 631 21 36 0 0 chr3R 6112362 6112390 -21792663 + AT_rich Low_complexity Low_complexity 1 28 0 4 631 195 69 0 0 chr3R 6112899 6112928 -21792125 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 631 210 186 23 0 chr3R 6113510 6113553 -21791500 + (TATATG)n Simple_repeat Simple_repeat 2 45 0 4 631 21 57 0 0 chr3R 6113860 6113895 -21791158 + AT_rich Low_complexity Low_complexity 1 35 0 4 631 23 0 0 0 chr3R 6114041 6114064 -21790989 + AT_rich Low_complexity Low_complexity 1 23 0 4 631 218 250 0 0 chr3R 6116846 6116894 -21788159 + (CCCCAG)n Simple_repeat Simple_repeat 4 51 0 4 631 21 0 0 0 chr3R 6117262 6117283 -21787770 + AT_rich Low_complexity Low_complexity 1 21 0 4 631 30 27 0 0 chr3R 6117787 6117824 -21787229 + AT_rich Low_complexity Low_complexity 1 37 0 4 631 207 171 0 0 chr3R 6118870 6118905 -21786148 + CT-rich Low_complexity Low_complexity 1 35 0 4 631 38 51 0 0 chr3R 6120743 6120802 -21784251 + AT_rich Low_complexity Low_complexity 1 59 0 4 631 271 205 39 0 chr3R 6121567 6121645 -21783408 + ROO_I LTR Pao 643 723 -7533 4 631 180 0 0 0 chr3R 6121896 6121916 -21783137 + (A)n Simple_repeat Simple_repeat 1 20 0 4 631 206 215 0 12 chr3R 6122153 6122233 -21782820 + (TTG)n Simple_repeat Simple_repeat 2 80 0 4 631 237 83 0 0 chr3R 6125044 6125080 -21779973 + (TCCA)n Simple_repeat Simple_repeat 4 39 0 4 631 24 0 0 0 chr3R 6126204 6126228 -21778825 + AT_rich Low_complexity Low_complexity 1 24 0 4 631 204 149 0 0 chr3R 6126800 6126847 -21778206 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 631 223 116 47 0 chr3R 6127185 6127228 -21777825 + (CCAA)n Simple_repeat Simple_repeat 4 48 0 4 631 227 310 6 25 chr3R 6127838 6128000 -21777053 + (CCA)n Simple_repeat Simple_repeat 2 160 0 4 631 21 71 0 0 chr3R 6133902 6133944 -21771109 + AT_rich Low_complexity Low_complexity 1 42 0 4 631 22 56 0 0 chr3R 6136304 6136340 -21768713 + AT_rich Low_complexity Low_complexity 1 36 0 4 631 234 238 9 45 chr3R 6141806 6141916 -21763137 + A-rich Low_complexity Low_complexity 3 108 0 4 631 21 0 0 0 chr3R 6147882 6147903 -21757150 + AT_rich Low_complexity Low_complexity 1 21 0 4 631 180 77 0 0 chr3R 6153478 6153504 -21751549 + (TCC)n Simple_repeat Simple_repeat 3 28 0 4 631 202 188 0 0 chr3R 6153824 6153856 -21751197 + (TTG)n Simple_repeat Simple_repeat 2 33 0 4 631 31 68 0 0 chr3R 6156377 6156436 -21748617 + AT_rich Low_complexity Low_complexity 1 59 0 4 631 212 122 0 47 chr3R 6157022 6157065 -21747988 + CT-rich Low_complexity Low_complexity 3 43 0 4 631 21 0 0 0 chr3R 6157186 6157207 -21747846 + AT_rich Low_complexity Low_complexity 1 21 0 4 632 3575 5 10 7 chr3R 6167387 6167800 -21737253 - DM297_LTR LTR Gypsy 0 414 1 4 632 46433 38 6 3 chr3R 6167798 6173891 -21731162 - DM297_I LTR Gypsy 0 6420 1 4 632 3575 5 10 7 chr3R 6173891 6174304 -21730749 - DM297_LTR LTR Gypsy 0 414 1 4 632 58 0 0 0 chr3R 6174304 6174362 -21730691 + AT_rich Low_complexity Low_complexity 1 58 0 4 632 36 0 0 0 chr3R 6175352 6175388 -21729665 + AT_rich Low_complexity Low_complexity 1 36 0 4 632 24 0 0 0 chr3R 6175700 6175724 -21729329 + AT_rich Low_complexity Low_complexity 1 24 0 4 632 263 304 0 0 chr3R 6183347 6183416 -21721637 + (TATG)n Simple_repeat Simple_repeat 3 71 0 4 632 28 48 0 0 chr3R 6183610 6183652 -21721401 + AT_rich Low_complexity Low_complexity 1 42 0 4 632 27 0 0 0 chr3R 6187334 6187361 -21717692 + AT_rich Low_complexity Low_complexity 1 27 0 4 632 24 0 0 0 chr3R 6192113 6192137 -21712916 + AT_rich Low_complexity Low_complexity 1 24 0 4 632 198 103 0 0 chr3R 6192637 6192666 -21712387 + (ATGGTG)n Simple_repeat Simple_repeat 4 32 0 4 632 219 36 0 0 chr3R 6192836 6192864 -21712189 + (TGG)n Simple_repeat Simple_repeat 2 29 0 4 632 210 37 0 0 chr3R 6194514 6194541 -21710512 + (T)n Simple_repeat Simple_repeat 1 27 0 4 632 24 32 0 0 chr3R 6196359 6196390 -21708663 + AT_rich Low_complexity Low_complexity 1 31 0 4 632 189 94 0 0 chr3R 6197064 6197096 -21707957 + (CCAA)n Simple_repeat Simple_repeat 2 33 0 4 632 24 0 0 0 chr3R 6197728 6197752 -21707301 + AT_rich Low_complexity Low_complexity 1 24 0 4 632 22 0 0 0 chr3R 6198276 6198298 -21706755 + AT_rich Low_complexity Low_complexity 1 22 0 4 632 31 44 0 0 chr3R 6200023 6200068 -21704985 + AT_rich Low_complexity Low_complexity 1 45 0 4 632 23 33 0 0 chr3R 6201347 6201377 -21703676 + AT_rich Low_complexity Low_complexity 1 30 0 4 632 23 33 0 0 chr3R 6202084 6202114 -21702939 + AT_rich Low_complexity Low_complexity 1 30 0 4 632 25 31 0 0 chr3R 6204607 6204639 -21700414 + AT_rich Low_complexity Low_complexity 1 32 0 4 632 26 0 0 0 chr3R 6204947 6204973 -21700080 + AT_rich Low_complexity Low_complexity 1 26 0 4 632 23 54 0 0 chr3R 6207567 6207604 -21697449 + AT_rich Low_complexity Low_complexity 1 37 0 4 632 218 195 0 0 chr3R 6208970 6209011 -21696042 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 632 23 54 0 0 chr3R 6211178 6211215 -21693838 + AT_rich Low_complexity Low_complexity 1 37 0 4 632 218 195 0 0 chr3R 6212581 6212622 -21692431 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 632 218 228 0 17 chr3R 6217652 6217710 -21687343 + (ATTCG)n Simple_repeat Simple_repeat 1 57 0 4 632 23 33 0 0 chr3R 6221590 6221620 -21683433 + AT_rich Low_complexity Low_complexity 1 30 0 4 632 209 258 22 33 chr3R 6222857 6222949 -21682104 + A-rich Low_complexity Low_complexity 1 91 0 4 632 211 194 0 0 chr3R 6223867 6223903 -21681150 + (CAG)n Simple_repeat Simple_repeat 3 38 0 4 632 255 61 0 0 chr3R 6226143 6226176 -21678877 + (TTA)n Simple_repeat Simple_repeat 1 33 0 4 632 21 82 0 0 chr3R 6226424 6226473 -21678580 + AT_rich Low_complexity Low_complexity 1 49 0 4 632 22 0 0 0 chr3R 6237300 6237322 -21667731 + AT_rich Low_complexity Low_complexity 1 22 0 4 632 490 147 38 29 chr3R 6243410 6243515 -21661538 - DNAREP1_DM LINE Penelope -488 106 1 4 632 21 57 0 0 chr3R 6244975 6245010 -21660043 + AT_rich Low_complexity Low_complexity 1 35 0 4 632 330 182 0 0 chr3R 6246279 6246334 -21658719 + DNAREP1_DM LINE Penelope 28 82 -512 4 632 180 125 0 0 chr3R 6246941 6246973 -21658080 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 632 186 103 0 0 chr3R 6247115 6247144 -21657909 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 632 24 32 0 0 chr3R 6248008 6248039 -21657014 + AT_rich Low_complexity Low_complexity 1 31 0 4 632 35 24 0 0 chr3R 6248101 6248143 -21656910 + AT_rich Low_complexity Low_complexity 1 42 0 4 632 180 0 0 0 chr3R 6248840 6248860 -21656193 + (A)n Simple_repeat Simple_repeat 1 20 0 4 632 180 0 0 0 chr3R 6250826 6250846 -21654207 + (TA)n Simple_repeat Simple_repeat 1 20 0 4 632 300 70 0 0 chr3R 6252741 6252784 -21652269 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 632 24 32 0 0 chr3R 6252828 6252859 -21652194 + AT_rich Low_complexity Low_complexity 1 31 0 4 632 192 167 0 0 chr3R 6253880 6253928 -21651125 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 632 180 152 0 0 chr3R 6256955 6256988 -21648065 + (ATG)n Simple_repeat Simple_repeat 1 33 0 4 632 180 0 0 0 chr3R 6259407 6259427 -21645626 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 632 270 274 0 0 chr3R 6259752 6259847 -21645206 + (TG)n Simple_repeat Simple_repeat 2 96 0 4 632 28 0 0 0 chr3R 6260605 6260633 -21644420 + AT_rich Low_complexity Low_complexity 1 28 0 4 632 183 42 0 0 chr3R 6265843 6265867 -21639186 + (A)n Simple_repeat Simple_repeat 1 24 0 4 632 195 189 0 0 chr3R 6267793 6267846 -21637207 + (CTG)n Simple_repeat Simple_repeat 2 54 0 4 632 201 191 21 0 chr3R 6268283 6268330 -21636723 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 632 23 68 0 0 chr3R 6269239 6269283 -21635770 + AT_rich Low_complexity Low_complexity 1 44 0 4 632 228 86 0 0 chr3R 6271330 6271365 -21633688 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 632 21 36 0 0 chr3R 6276599 6276627 -21628426 + AT_rich Low_complexity Low_complexity 1 28 0 4 632 198 0 0 0 chr3R 6277259 6277281 -21627772 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 632 219 36 0 0 chr3R 6277598 6277626 -21627427 + (GGAGAA)n Simple_repeat Simple_repeat 3 30 0 4 632 23 0 0 0 chr3R 6279158 6279181 -21625872 + AT_rich Low_complexity Low_complexity 1 23 0 4 632 195 139 0 0 chr3R 6280308 6280344 -21624709 + (TTCTCC)n Simple_repeat Simple_repeat 5 40 0 4 632 23 33 0 0 chr3R 6280859 6280889 -21624164 + AT_rich Low_complexity Low_complexity 1 30 0 4 632 183 80 0 0 chr3R 6282309 6282334 -21622719 + (CATCG)n Simple_repeat Simple_repeat 4 28 0 4 633 222 118 0 0 chr3R 6292812 6292846 -21612207 + (ATTCG)n Simple_repeat Simple_repeat 1 34 0 4 633 260 182 55 0 chr3R 6295261 6295316 -21609737 + ROO_I LTR Pao 675 732 -7524 4 633 225 191 15 45 chr3R 6298720 6298786 -21606267 + (CTG)n Simple_repeat Simple_repeat 3 66 0 4 633 267 190 0 37 chr3R 6299391 6299473 -21605580 + ROO_I LTR Pao 651 729 -7527 4 633 186 167 0 0 chr3R 6299790 6299826 -21605227 + A-rich Low_complexity Low_complexity 1 36 0 4 633 246 105 0 0 chr3R 6300306 6300344 -21604709 + (TTG)n Simple_repeat Simple_repeat 1 38 0 4 633 22 0 0 0 chr3R 6305973 6305995 -21599058 + AT_rich Low_complexity Low_complexity 1 22 0 4 633 180 0 0 0 chr3R 6309188 6309208 -21595845 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 633 202 135 0 55 chr3R 6311355 6311410 -21593643 + (CATCC)n Simple_repeat Simple_repeat 3 54 0 4 633 27 29 0 0 chr3R 6311783 6311817 -21593236 + AT_rich Low_complexity Low_complexity 1 34 0 4 633 208 196 0 42 chr3R 6312519 6312567 -21592486 + (CTG)n Simple_repeat Simple_repeat 2 47 0 4 633 249 119 0 0 chr3R 6316930 6316972 -21588081 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 633 245 128 0 21 chr3R 6317919 6317967 -21587086 + (CAA)n Simple_repeat Simple_repeat 3 49 0 4 633 203 182 0 0 chr3R 6318203 6318236 -21586817 + (CAA)n Simple_repeat Simple_repeat 1 33 0 4 633 213 94 0 0 chr3R 6319375 6319407 -21585646 + (CCCTG)n Simple_repeat Simple_repeat 4 35 0 4 633 21 36 0 0 chr3R 6320757 6320785 -21584268 + AT_rich Low_complexity Low_complexity 1 28 0 4 633 252 0 0 0 chr3R 6321119 6321147 -21583906 + (GA)n Simple_repeat Simple_repeat 2 29 0 4 633 32 0 0 0 chr3R 6321257 6321289 -21583764 + AT_rich Low_complexity Low_complexity 1 32 0 4 633 31 0 0 0 chr3R 6323792 6323823 -21581230 + AT_rich Low_complexity Low_complexity 1 31 0 4 633 245 262 0 0 chr3R 6328000 6328061 -21576992 - ROO_I LTR Pao -7552 704 644 4 633 278 50 0 24 chr3R 6328370 6328411 -21576642 + (CAG)n Simple_repeat Simple_repeat 1 40 0 4 633 22 0 0 0 chr3R 6328798 6328820 -21576233 + AT_rich Low_complexity Low_complexity 1 22 0 4 633 249 83 0 0 chr3R 6330779 6330815 -21574238 + (TGAA)n Simple_repeat Simple_repeat 4 39 0 4 633 25 51 0 0 chr3R 6331145 6331184 -21573869 + AT_rich Low_complexity Low_complexity 1 39 0 4 633 23 0 0 0 chr3R 6332633 6332656 -21572397 + AT_rich Low_complexity Low_complexity 1 23 0 4 633 270 56 0 0 chr3R 6333215 6333251 -21571802 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 633 180 0 0 0 chr3R 6333698 6333718 -21571335 + (CTCG)n Simple_repeat Simple_repeat 4 23 0 4 633 25 65 0 0 chr3R 6335643 6335689 -21569364 + AT_rich Low_complexity Low_complexity 1 46 0 4 633 226 270 27 0 chr3R 6336601 6336675 -21568378 + T-rich Low_complexity Low_complexity 2 77 0 4 633 191 213 0 13 chr3R 6336736 6336812 -21568241 + (TTG)n Simple_repeat Simple_repeat 1 75 0 4 633 29 0 0 0 chr3R 6337940 6337969 -21567084 + AT_rich Low_complexity Low_complexity 1 29 0 4 633 204 40 0 0 chr3R 6343073 6343098 -21561955 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 633 213 256 0 0 chr3R 6343317 6343399 -21561654 + (CAA)n Simple_repeat Simple_repeat 1 82 0 4 633 21 0 0 0 chr3R 6343721 6343742 -21561311 + AT_rich Low_complexity Low_complexity 1 21 0 4 633 229 278 0 0 chr3R 6344282 6344354 -21560699 + (TTG)n Simple_repeat Simple_repeat 1 72 0 4 633 222 37 0 0 chr3R 6345340 6345367 -21559686 + (T)n Simple_repeat Simple_repeat 1 27 0 4 633 369 136 0 0 chr3R 6347659 6347725 -21557328 + (ATG)n Simple_repeat Simple_repeat 2 67 0 4 633 22 56 0 0 chr3R 6348284 6348320 -21556733 + AT_rich Low_complexity Low_complexity 1 36 0 4 633 202 154 0 25 chr3R 6349615 6349655 -21555398 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 633 207 0 0 0 chr3R 6350903 6350926 -21554127 + (A)n Simple_repeat Simple_repeat 1 23 0 4 633 222 156 0 0 chr3R 6351869 6351914 -21553139 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 633 210 37 0 0 chr3R 6352061 6352088 -21552965 + (TAA)n Simple_repeat Simple_repeat 2 28 0 4 633 206 281 0 0 chr3R 6353517 6353574 -21551479 + GA-rich Low_complexity Low_complexity 2 58 0 4 633 201 241 11 67 chr3R 6354157 6354246 -21550807 + A-rich Low_complexity Low_complexity 2 85 0 4 633 300 127 0 0 chr3R 6354556 6354611 -21550442 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 633 26 30 0 0 chr3R 6358133 6358166 -21546887 + AT_rich Low_complexity Low_complexity 1 33 0 4 633 211 150 49 16 chr3R 6361084 6361145 -21543908 + (TAA)n Simple_repeat Simple_repeat 1 63 0 4 633 220 216 13 39 chr3R 6361484 6361561 -21543492 + A-rich Low_complexity Low_complexity 3 77 0 4 633 24 0 0 0 chr3R 6362387 6362411 -21542642 + AT_rich Low_complexity Low_complexity 1 24 0 4 633 30 89 0 0 chr3R 6362901 6362980 -21542073 + AT_rich Low_complexity Low_complexity 1 79 0 4 633 25 51 0 0 chr3R 6363839 6363878 -21541175 + AT_rich Low_complexity Low_complexity 1 39 0 4 633 189 0 0 0 chr3R 6365592 6365613 -21539440 + (A)n Simple_repeat Simple_repeat 1 21 0 4 633 201 200 22 0 chr3R 6367005 6367050 -21538003 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 633 208 311 0 0 chr3R 6367619 6367693 -21537360 + T-rich Low_complexity Low_complexity 1 74 0 4 633 216 0 0 0 chr3R 6371875 6371899 -21533154 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 633 208 161 17 35 chr3R 6371972 6372030 -21533023 + (CTG)n Simple_repeat Simple_repeat 3 59 0 4 633 228 67 0 0 chr3R 6372314 6372344 -21532709 + (CAG)n Simple_repeat Simple_repeat 1 30 0 4 633 27 49 0 0 chr3R 6373159 6373200 -21531853 + AT_rich Low_complexity Low_complexity 1 41 0 4 633 23 54 0 0 chr3R 6373894 6373931 -21531122 + AT_rich Low_complexity Low_complexity 1 37 0 4 633 23 54 0 0 chr3R 6375261 6375298 -21529755 + AT_rich Low_complexity Low_complexity 1 37 0 4 633 189 175 0 0 chr3R 6375839 6375879 -21529174 + (TCTCTG)n Simple_repeat Simple_repeat 2 41 0 4 633 183 162 0 0 chr3R 6376212 6376249 -21528804 + (GAGTG)n Simple_repeat Simple_repeat 2 38 0 4 633 189 0 0 0 chr3R 6376420 6376441 -21528612 + (CTG)n Simple_repeat Simple_repeat 2 22 0 4 633 214 192 0 19 chr3R 6376525 6376578 -21528475 + (TTTCG)n Simple_repeat Simple_repeat 3 54 0 4 633 206 250 0 0 chr3R 6376687 6376739 -21528314 + T-rich Low_complexity Low_complexity 1 52 0 4 633 29 0 0 0 chr3R 6378212 6378241 -21526812 + AT_rich Low_complexity Low_complexity 1 29 0 4 633 23 0 0 0 chr3R 6381151 6381174 -21523879 + AT_rich Low_complexity Low_complexity 1 23 0 4 633 21 0 0 0 chr3R 6382553 6382574 -21522479 + AT_rich Low_complexity Low_complexity 1 21 0 4 633 285 109 0 0 chr3R 6383247 6383293 -21521760 + (TCTG)n Simple_repeat Simple_repeat 2 47 0 4 633 21 57 0 0 chr3R 6384419 6384454 -21520599 + AT_rich Low_complexity Low_complexity 1 35 0 4 633 25 0 0 0 chr3R 6386225 6386250 -21518803 + AT_rich Low_complexity Low_complexity 1 25 0 4 633 305 93 0 18 chr3R 6388128 6388183 -21516870 + (CGAAA)n Simple_repeat Simple_repeat 5 58 0 4 633 200 200 0 0 chr3R 6388321 6388361 -21516692 + (CACCAT)n Simple_repeat Simple_repeat 4 43 0 4 633 270 95 0 0 chr3R 6389045 6389087 -21515966 + (CAATC)n Simple_repeat Simple_repeat 5 46 0 4 633 207 0 0 0 chr3R 6393573 6393596 -21511457 + (T)n Simple_repeat Simple_repeat 1 23 0 4 633 238 123 17 17 chr3R 6395426 6395484 -21509569 + (CAGT)n Simple_repeat Simple_repeat 2 59 0 4 633 186 71 0 0 chr3R 6396123 6396151 -21508902 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 633 216 229 21 0 chr3R 6396376 6396424 -21508629 + (TATATG)n Simple_repeat Simple_repeat 1 49 0 4 633 222 160 0 0 chr3R 6396543 6396593 -21508460 + (CGGA)n Simple_repeat Simple_repeat 2 51 0 4 633 213 200 18 35 chr3R 6397916 6397973 -21507080 + (CAGA)n Simple_repeat Simple_repeat 4 59 0 4 633 207 0 0 0 chr3R 6398514 6398537 -21506516 + (CAT)n Simple_repeat Simple_repeat 1 23 0 4 633 22 0 0 0 chr3R 6399095 6399117 -21505936 + AT_rich Low_complexity Low_complexity 1 22 0 4 633 234 0 0 0 chr3R 6399489 6399515 -21505538 + (CAT)n Simple_repeat Simple_repeat 3 28 0 4 633 21 0 0 0 chr3R 6400307 6400328 -21504725 + AT_rich Low_complexity Low_complexity 1 21 0 4 633 184 175 17 34 chr3R 6400944 6401003 -21504050 + (CAA)n Simple_repeat Simple_repeat 1 58 0 4 633 207 139 0 0 chr3R 6403496 6403532 -21501521 + (CAGA)n Simple_repeat Simple_repeat 2 37 0 4 633 210 71 0 0 chr3R 6404622 6404650 -21500403 + (CCA)n Simple_repeat Simple_repeat 2 29 0 4 633 33 56 0 0 chr3R 6407429 6407483 -21497570 + AT_rich Low_complexity Low_complexity 1 54 0 4 633 32 98 0 0 chr3R 6407626 6407728 -21497325 + AT_rich Low_complexity Low_complexity 1 102 0 4 633 204 146 20 40 chr3R 6407792 6407842 -21497211 + T-rich Low_complexity Low_complexity 6 54 0 4 633 209 263 10 29 chr3R 6409928 6410030 -21495023 + (TA)n Simple_repeat Simple_repeat 1 100 0 4 633 23 0 0 0 chr3R 6410214 6410237 -21494816 + AT_rich Low_complexity Low_complexity 1 23 0 4 633 180 189 0 42 chr3R 6410830 6410902 -21494151 + (CTG)n Simple_repeat Simple_repeat 2 70 0 4 633 237 220 7 27 chr3R 6410966 6411052 -21494001 + T-rich Low_complexity Low_complexity 1 84 0 4 633 183 129 0 0 chr3R 6412375 6412406 -21492647 + (CAGC)n Simple_repeat Simple_repeat 3 33 0 4 633 223 191 0 0 chr3R 6412795 6412837 -21492216 + (CAA)n Simple_repeat Simple_repeat 3 44 0 4 633 234 81 0 0 chr3R 6412912 6412949 -21492104 + (CTG)n Simple_repeat Simple_repeat 1 37 0 4 633 224 122 24 0 chr3R 6413387 6413428 -21491625 + (CTG)n Simple_repeat Simple_repeat 3 44 0 4 633 300 111 0 0 chr3R 6413574 6413619 -21491434 + (CTG)n Simple_repeat Simple_repeat 3 47 0 4 633 287 339 0 0 chr3R 6414470 6414588 -21490465 + (TCTG)n Simple_repeat Simple_repeat 1 118 0 4 633 192 212 0 0 chr3R 6414589 6414655 -21490398 + T-rich Low_complexity Low_complexity 1 66 0 4 633 201 94 0 0 chr3R 6414906 6414938 -21490115 + (T)n Simple_repeat Simple_repeat 1 32 0 4 633 186 118 0 0 chr3R 6419112 6419146 -21485907 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 633 261 0 0 0 chr3R 6420890 6420919 -21484134 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 633 24 53 0 0 chr3R 6421786 6421824 -21483229 + AT_rich Low_complexity Low_complexity 1 38 0 4 633 183 184 0 0 chr3R 6422235 6422273 -21482780 + (CATA)n Simple_repeat Simple_repeat 3 40 0 4 634 26 0 0 0 chr3R 6423422 6423448 -21481605 + AT_rich Low_complexity Low_complexity 1 26 0 4 634 222 91 0 0 chr3R 6423752 6423785 -21481268 + (TTG)n Simple_repeat Simple_repeat 2 34 0 4 634 208 122 49 0 chr3R 6425568 6425609 -21479444 + T-rich Low_complexity Low_complexity 2 44 0 4 634 246 32 0 0 chr3R 6426383 6426414 -21478639 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 634 261 0 0 0 chr3R 6426809 6426838 -21478215 + (CAT)n Simple_repeat Simple_repeat 1 29 0 4 634 198 0 0 0 chr3R 6427746 6427768 -21477285 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 634 246 156 0 0 chr3R 6427884 6427929 -21477124 + (CAG)n Simple_repeat Simple_repeat 2 46 0 4 634 22 0 0 0 chr3R 6429735 6429757 -21475296 + AT_rich Low_complexity Low_complexity 1 22 0 4 634 180 0 0 0 chr3R 6430007 6430027 -21475026 + (TTGG)n Simple_repeat Simple_repeat 3 22 0 4 634 180 77 0 0 chr3R 6433218 6433244 -21471809 + (TTTTTA)n Simple_repeat Simple_repeat 4 29 0 4 634 25 31 0 0 chr3R 6437063 6437095 -21467958 + AT_rich Low_complexity Low_complexity 1 32 0 4 634 180 0 0 0 chr3R 6437640 6437660 -21467393 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 634 203 152 0 0 chr3R 6438251 6438284 -21466769 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 634 243 217 0 28 chr3R 6439225 6439296 -21465757 + (TTG)n Simple_repeat Simple_repeat 1 69 0 4 634 201 39 0 0 chr3R 6439843 6439869 -21465184 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4 634 21 57 0 0 chr3R 6441180 6441215 -21463838 + AT_rich Low_complexity Low_complexity 1 35 0 4 634 28 0 0 0 chr3R 6444237 6444265 -21460788 + AT_rich Low_complexity Low_complexity 1 28 0 4 634 23 0 0 0 chr3R 6444289 6444312 -21460741 + AT_rich Low_complexity Low_complexity 1 23 0 4 634 180 125 0 0 chr3R 6447994 6448026 -21457027 + (GA)n Simple_repeat Simple_repeat 2 33 0 4 634 240 216 0 0 chr3R 6449104 6449155 -21455898 + (ATG)n Simple_repeat Simple_repeat 2 52 0 4 634 23 0 0 0 chr3R 6451939 6451962 -21453091 + AT_rich Low_complexity Low_complexity 1 23 0 4 634 24 0 0 0 chr3R 6452868 6452892 -21452161 + AT_rich Low_complexity Low_complexity 1 24 0 4 634 249 33 0 0 chr3R 6458924 6458954 -21446099 + (CTG)n Simple_repeat Simple_repeat 1 30 0 4 634 226 268 0 0 chr3R 6459933 6459989 -21445064 + (CAG)n Simple_repeat Simple_repeat 1 56 0 4 634 258 56 0 0 chr3R 6464709 6464745 -21440308 + (CGAG)n Simple_repeat Simple_repeat 2 37 0 4 634 207 150 31 62 chr3R 6465155 6465219 -21439834 + T-rich Low_complexity Low_complexity 5 66 0 4 634 192 77 0 0 chr3R 6465250 6465276 -21439777 + (CGTCG)n Simple_repeat Simple_repeat 3 28 0 4 634 183 80 0 0 chr3R 6465528 6465553 -21439500 + (CTGTG)n Simple_repeat Simple_repeat 5 29 0 4 634 33 56 0 0 chr3R 6465909 6465963 -21439090 + AT_rich Low_complexity Low_complexity 1 54 0 4 634 198 91 0 0 chr3R 6469859 6469892 -21435161 + (A)n Simple_repeat Simple_repeat 1 33 0 4 634 26 93 0 0 chr3R 6470354 6470429 -21434624 + AT_rich Low_complexity Low_complexity 1 75 0 4 634 32 26 0 0 chr3R 6473583 6473622 -21431431 + AT_rich Low_complexity Low_complexity 1 39 0 4 634 28 0 0 0 chr3R 6473813 6473841 -21431212 + AT_rich Low_complexity Low_complexity 1 28 0 4 634 21 0 0 0 chr3R 6476074 6476095 -21428958 + AT_rich Low_complexity Low_complexity 1 21 0 4 634 21 36 0 0 chr3R 6478421 6478449 -21426604 + AT_rich Low_complexity Low_complexity 1 28 0 4 634 223 111 111 0 chr3R 6479411 6479465 -21425588 + (TCCA)n Simple_repeat Simple_repeat 3 62 0 4 634 275 275 0 0 chr3R 6482492 6482583 -21422470 + A-rich Low_complexity Low_complexity 1 91 0 4 634 186 103 0 0 chr3R 6485660 6485689 -21419364 + (T)n Simple_repeat Simple_repeat 1 29 0 4 634 291 161 0 0 chr3R 6486579 6486635 -21418418 + (CGGA)n Simple_repeat Simple_repeat 2 57 0 4 634 21 57 0 0 chr3R 6487066 6487101 -21417952 + AT_rich Low_complexity Low_complexity 1 35 0 4 634 180 176 0 0 chr3R 6487530 6487564 -21417489 + A-rich Low_complexity Low_complexity 2 35 0 4 634 24 0 0 0 chr3R 6489894 6489918 -21415135 + AT_rich Low_complexity Low_complexity 1 24 0 4 634 183 80 0 0 chr3R 6491084 6491109 -21413944 + (CAAAT)n Simple_repeat Simple_repeat 1 25 0 4 634 30 0 0 0 chr3R 6491990 6492020 -21413033 + AT_rich Low_complexity Low_complexity 1 30 0 4 634 186 103 0 0 chr3R 6494181 6494210 -21410843 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 634 234 91 0 0 chr3R 6495702 6495735 -21409318 + (CAACC)n Simple_repeat Simple_repeat 4 36 0 4 634 26 30 0 0 chr3R 6499175 6499208 -21405845 + AT_rich Low_complexity Low_complexity 1 33 0 4 634 258 32 0 0 chr3R 6500261 6500292 -21404761 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 634 267 0 53 0 chr3R 6500801 6500839 -21404214 - I_DM LINE I -761 5470 5431 4 634 27 0 0 0 chr3R 6502135 6502162 -21402891 + AT_rich Low_complexity Low_complexity 1 27 0 4 634 22 0 0 0 chr3R 6505494 6505516 -21399537 + AT_rich Low_complexity Low_complexity 1 22 0 4 634 207 191 0 0 chr3R 6508549 6508591 -21396462 + GA-rich Low_complexity Low_complexity 2 43 0 4 634 261 140 0 0 chr3R 6508933 6508990 -21396063 + (T)n Simple_repeat Simple_repeat 1 57 0 4 634 234 244 0 68 chr3R 6512241 6512329 -21392724 + ROO_I LTR Pao 645 726 -7530 4 634 21 57 0 0 chr3R 6514764 6514799 -21390254 + AT_rich Low_complexity Low_complexity 1 35 0 4 634 205 217 58 0 chr3R 6516473 6516542 -21388511 + (TA)n Simple_repeat Simple_repeat 1 73 0 4 634 241 150 62 12 chr3R 6516664 6516745 -21388308 + (CA)n Simple_repeat Simple_repeat 2 86 0 4 634 315 208 39 0 chr3R 6519742 6519819 -21385234 + (CCCGAA)n Simple_repeat Simple_repeat 4 83 0 4 634 29 70 0 0 chr3R 6529083 6529140 -21375913 + AT_rich Low_complexity Low_complexity 1 57 0 4 634 22 35 0 0 chr3R 6543133 6543162 -21361891 + AT_rich Low_complexity Low_complexity 1 29 0 4 634 27 0 0 0 chr3R 6545388 6545415 -21359638 + AT_rich Low_complexity Low_complexity 1 27 0 4 634 218 146 0 47 chr3R 6547892 6547935 -21357118 + (GGATG)n Simple_repeat Simple_repeat 1 41 0 4 635 25 0 0 0 chr3R 6553989 6554014 -21351039 + AT_rich Low_complexity Low_complexity 1 25 0 4 635 22 0 0 0 chr3R 6559416 6559438 -21345615 + AT_rich Low_complexity Low_complexity 1 22 0 4 635 27 73 0 0 chr3R 6560004 6560059 -21344994 + AT_rich Low_complexity Low_complexity 1 55 0 4 635 201 82 82 0 chr3R 6574339 6574388 -21330665 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 635 30 27 0 0 chr3R 6580344 6580381 -21324672 + AT_rich Low_complexity Low_complexity 1 37 0 4 635 22 56 0 0 chr3R 6584046 6584082 -21320971 + AT_rich Low_complexity Low_complexity 1 36 0 4 635 22 0 0 0 chr3R 6590931 6590953 -21314100 + AT_rich Low_complexity Low_complexity 1 22 0 4 635 243 61 0 0 chr3R 6593942 6593975 -21311078 + (TCC)n Simple_repeat Simple_repeat 1 33 0 4 635 185 94 31 0 chr3R 6597198 6597230 -21307823 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 635 26 0 0 0 chr3R 6599312 6599338 -21305715 + AT_rich Low_complexity Low_complexity 1 26 0 4 635 21 82 0 0 chr3R 6603879 6603928 -21301125 + AT_rich Low_complexity Low_complexity 1 49 0 4 635 24 0 0 0 chr3R 6610017 6610041 -21295012 + AT_rich Low_complexity Low_complexity 1 24 0 4 635 195 42 0 0 chr3R 6617467 6617491 -21287562 + (TATATG)n Simple_repeat Simple_repeat 5 28 0 4 635 21 36 0 0 chr3R 6624185 6624213 -21280840 + AT_rich Low_complexity Low_complexity 1 28 0 4 635 21 0 0 0 chr3R 6624518 6624539 -21280514 + AT_rich Low_complexity Low_complexity 1 21 0 4 635 21 36 0 0 chr3R 6626623 6626651 -21278402 + AT_rich Low_complexity Low_complexity 1 28 0 4 635 21 36 0 0 chr3R 6627424 6627452 -21277601 + AT_rich Low_complexity Low_complexity 1 28 0 4 635 207 0 0 0 chr3R 6629834 6629857 -21275196 + (TA)n Simple_repeat Simple_repeat 2 24 0 4 635 4552 12 0 0 chr3R 6629951 6630458 -21274595 + DM176_LTR LTR Gypsy 1 507 0 4 635 57164 2 4 4 chr3R 6630458 6630999 -21274054 + DM176_I LTR Gypsy 1 527 -5893 4 635 208 28 26 53 chr3R 6630999 6631037 -21274016 + (TAA)n Simple_repeat Simple_repeat 3 39 0 4 635 57164 2 4 4 chr3R 6631037 6636914 -21268139 + DM176_I LTR Gypsy 528 6420 0 4 635 4552 12 0 0 chr3R 6636914 6637421 -21267632 + DM176_LTR LTR Gypsy 1 507 0 4 635 21 0 0 0 chr3R 6640727 6640748 -21264305 + AT_rich Low_complexity Low_complexity 1 21 0 4 635 198 71 0 0 chr3R 6644122 6644150 -21260903 + (A)n Simple_repeat Simple_repeat 1 28 0 4 635 312 111 0 0 chr3R 6645666 6645720 -21259333 + (ATAGG)n Simple_repeat Simple_repeat 4 57 0 4 635 186 43 0 0 chr3R 6645952 6645975 -21259078 + (CGATG)n Simple_repeat Simple_repeat 5 27 0 4 635 189 107 0 0 chr3R 6646236 6646264 -21258789 + (CATA)n Simple_repeat Simple_repeat 3 30 0 4 635 270 0 0 0 chr3R 6646457 6646487 -21258566 + (A)n Simple_repeat Simple_repeat 1 30 0 4 635 306 148 0 0 chr3R 6647344 6647398 -21257655 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 635 243 0 0 0 chr3R 6650676 6650703 -21254350 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 635 21 0 0 0 chr3R 6652075 6652096 -21252957 + AT_rich Low_complexity Low_complexity 1 21 0 4 635 39 0 0 0 chr3R 6652157 6652196 -21252857 + AT_rich Low_complexity Low_complexity 1 39 0 4 635 209 98 48 24 chr3R 6652514 6652556 -21252497 + (GAGTG)n Simple_repeat Simple_repeat 5 47 0 4 635 287 65 22 0 chr3R 6652643 6652689 -21252364 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 635 252 86 0 0 chr3R 6652877 6652912 -21252141 + (CTATA)n Simple_repeat Simple_repeat 5 39 0 4 635 29 0 0 0 chr3R 6653905 6653934 -21251119 + AT_rich Low_complexity Low_complexity 1 29 0 4 635 186 143 0 0 chr3R 6654372 6654407 -21250646 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 635 21 36 0 0 chr3R 6656484 6656512 -21248541 + AT_rich Low_complexity Low_complexity 1 28 0 4 635 35 0 0 0 chr3R 6657331 6657366 -21247687 + AT_rich Low_complexity Low_complexity 1 35 0 4 635 205 233 55 0 chr3R 6658676 6658749 -21246304 + A-rich Low_complexity Low_complexity 1 77 0 4 635 204 125 0 0 chr3R 6662932 6662964 -21242089 + (CGGT)n Simple_repeat Simple_repeat 2 33 0 4 635 365 202 0 25 chr3R 6663736 6663858 -21241195 + (CAT)n Simple_repeat Simple_repeat 1 119 0 4 635 192 40 0 0 chr3R 6667756 6667781 -21237272 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 4 635 235 231 15 0 chr3R 6668011 6668076 -21236977 + (CGA)n Simple_repeat Simple_repeat 2 67 0 4 635 30 27 0 0 chr3R 6674815 6674852 -21230201 + AT_rich Low_complexity Low_complexity 1 37 0 4 635 41 0 0 0 chr3R 6675397 6675438 -21229615 + AT_rich Low_complexity Low_complexity 1 41 0 4 635 21 0 0 0 chr3R 6677480 6677501 -21227552 + AT_rich Low_complexity Low_complexity 1 21 0 4 635 204 111 0 0 chr3R 6677820 6677856 -21227197 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 4 635 21 0 0 0 chr3R 6681983 6682004 -21223049 + AT_rich Low_complexity Low_complexity 1 21 0 4 635 21 82 0 0 chr3R 6683856 6683905 -21221148 + AT_rich Low_complexity Low_complexity 1 49 0 4 636 180 0 0 0 chr3R 6689874 6689894 -21215159 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 636 22 0 0 0 chr3R 6690364 6690386 -21214667 + AT_rich Low_complexity Low_complexity 1 22 0 4 636 40 49 0 0 chr3R 6701476 6701537 -21203516 + AT_rich Low_complexity Low_complexity 1 61 0 4 636 29 70 0 0 chr3R 6701569 6701626 -21203427 + AT_rich Low_complexity Low_complexity 1 57 0 4 636 26 82 0 0 chr3R 6702380 6702441 -21202612 + AT_rich Low_complexity Low_complexity 1 61 0 4 636 192 40 0 0 chr3R 6713050 6713075 -21191978 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 636 222 222 0 0 chr3R 6716895 6716940 -21188113 + CT-rich Low_complexity Low_complexity 2 46 0 4 636 433 206 45 80 chr3R 6724319 6724519 -21180534 - PROTOP DNA P -429 4051 3859 4 636 23 54 0 0 chr3R 6724678 6724715 -21180338 + AT_rich Low_complexity Low_complexity 1 37 0 4 636 276 30 0 0 chr3R 6728858 6728891 -21176162 + (CATGC)n Simple_repeat Simple_repeat 1 33 0 4 636 201 171 0 0 chr3R 6729221 6729256 -21175797 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 636 225 146 0 0 chr3R 6730249 6730297 -21174756 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 636 202 56 27 27 chr3R 6730426 6730463 -21174590 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 636 303 136 0 0 chr3R 6730998 6731057 -21173996 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 636 23 33 0 0 chr3R 6732372 6732402 -21172651 + AT_rich Low_complexity Low_complexity 1 30 0 4 636 298 294 17 8 chr3R 6733358 6733478 -21171575 + (TCTCTG)n Simple_repeat Simple_repeat 4 124 0 4 636 186 43 0 0 chr3R 6739103 6739126 -21165927 + (TA)n Simple_repeat Simple_repeat 2 24 0 4 636 261 151 0 0 chr3R 6740422 6740475 -21164578 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 636 23 33 0 0 chr3R 6742308 6742338 -21162715 + AT_rich Low_complexity Low_complexity 1 30 0 4 636 222 91 0 0 chr3R 6742819 6742852 -21162201 + (TTG)n Simple_repeat Simple_repeat 1 33 0 4 636 250 255 19 19 chr3R 6744174 6744278 -21160775 + (CA)n Simple_repeat Simple_repeat 2 105 0 4 636 23 54 0 0 chr3R 6744619 6744656 -21160397 + AT_rich Low_complexity Low_complexity 1 37 0 4 636 436 185 89 148 chr3R 6746026 6746301 -21158752 + HOBO DNA hAT 85 293 -2723 4 636 246 204 0 0 chr3R 6748681 6748730 -21156323 + GA-rich Low_complexity Low_complexity 3 51 0 4 636 180 0 0 0 chr3R 6749191 6749211 -21155842 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 636 216 143 0 0 chr3R 6752042 6752084 -21152969 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 636 21 57 0 0 chr3R 6757888 6757923 -21147130 + AT_rich Low_complexity Low_complexity 1 35 0 4 636 208 147 0 0 chr3R 6758074 6758108 -21146945 + (CAGTT)n Simple_repeat Simple_repeat 1 34 0 4 636 239 275 33 0 chr3R 6758628 6758719 -21146334 + (CTG)n Simple_repeat Simple_repeat 3 96 0 4 636 25 65 0 0 chr3R 6759482 6759528 -21145525 + AT_rich Low_complexity Low_complexity 1 46 0 4 636 265 316 0 13 chr3R 6761075 6761152 -21143901 + (ACTG)n Simple_repeat Simple_repeat 1 76 0 4 636 28 0 0 0 chr3R 6762147 6762175 -21142878 + AT_rich Low_complexity Low_complexity 1 28 0 4 636 28 0 0 0 chr3R 6766926 6766954 -21138099 + AT_rich Low_complexity Low_complexity 1 28 0 4 636 244 250 20 59 chr3R 6767510 6767612 -21137441 + (CCCCAG)n Simple_repeat Simple_repeat 4 101 0 4 636 180 0 0 0 chr3R 6770479 6770499 -21134554 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 636 21 36 0 0 chr3R 6771240 6771268 -21133785 + AT_rich Low_complexity Low_complexity 1 28 0 4 636 180 0 0 0 chr3R 6772667 6772687 -21132366 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 636 192 40 0 0 chr3R 6773855 6773880 -21131173 + (CAGG)n Simple_repeat Simple_repeat 3 27 0 4 636 279 130 0 0 chr3R 6780517 6780571 -21124482 + (T)n Simple_repeat Simple_repeat 1 54 0 4 636 218 233 0 0 chr3R 6782215 6782258 -21122795 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 636 231 36 0 0 chr3R 6783628 6783656 -21121397 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 636 47773 5 0 0 chr3R 6783750 6788972 -21116081 + DMRT1B LINE R1 1 5183 0 4 636 259 119 0 23 chr3R 6790499 6790542 -21114511 + TRANSIB2 DNA Transib 2532 2573 -271 4 636 26 30 0 0 chr3R 6793702 6793735 -21111318 + AT_rich Low_complexity Low_complexity 1 33 0 4 636 189 0 0 0 chr3R 6795106 6795127 -21109926 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 636 207 157 19 19 chr3R 6795666 6795718 -21109335 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 636 226 240 27 0 chr3R 6795766 6795841 -21109212 + (CAG)n Simple_repeat Simple_repeat 3 79 0 4 636 207 0 0 0 chr3R 6796476 6796499 -21108554 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 636 230 216 20 0 chr3R 6798154 6798205 -21106848 + (TTG)n Simple_repeat Simple_repeat 3 54 0 4 636 234 62 0 0 chr3R 6798212 6798244 -21106809 + (CATCG)n Simple_repeat Simple_repeat 5 36 0 4 636 22 0 0 0 chr3R 6800762 6800784 -21104269 + AT_rich Low_complexity Low_complexity 1 22 0 4 636 22 35 0 0 chr3R 6803215 6803244 -21101809 + AT_rich Low_complexity Low_complexity 1 29 0 4 636 21 82 0 0 chr3R 6803723 6803772 -21101281 + AT_rich Low_complexity Low_complexity 1 49 0 4 636 234 0 0 0 chr3R 6807054 6807080 -21097973 + (GA)n Simple_repeat Simple_repeat 2 27 0 4 636 246 62 0 0 chr3R 6810951 6810983 -21094070 + (AACTG)n Simple_repeat Simple_repeat 2 33 0 4 636 186 43 0 0 chr3R 6811442 6811465 -21093588 + (GA)n Simple_repeat Simple_repeat 2 24 0 4 636 22 0 0 0 chr3R 6811999 6812021 -21093032 + AT_rich Low_complexity Low_complexity 1 22 0 4 636 198 71 0 0 chr3R 6812524 6812552 -21092501 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 636 264 59 0 0 chr3R 6814926 6814960 -21090093 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 636 21 0 0 0 chr3R 6815165 6815186 -21089867 + AT_rich Low_complexity Low_complexity 1 21 0 4 637 21 0 0 0 chr3R 6818748 6818769 -21086284 + AT_rich Low_complexity Low_complexity 1 21 0 4 637 216 0 0 0 chr3R 6818806 6818830 -21086223 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 637 211 182 18 18 chr3R 6820396 6820452 -21084601 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 637 230 80 0 91 chr3R 6830411 6830466 -21074587 + A-rich Low_complexity Low_complexity 1 50 0 4 637 231 125 0 0 chr3R 6831027 6831067 -21073986 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 637 211 235 0 29 chr3R 6833455 6833525 -21071528 + (TTG)n Simple_repeat Simple_repeat 1 68 0 4 637 30 27 0 0 chr3R 6835145 6835182 -21069871 + AT_rich Low_complexity Low_complexity 1 37 0 4 637 220 209 0 0 chr3R 6837158 6837201 -21067852 + (CACCAT)n Simple_repeat Simple_repeat 4 46 0 4 637 297 75 0 0 chr3R 6838746 6838786 -21066267 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 637 23 0 0 0 chr3R 6839670 6839693 -21065360 + AT_rich Low_complexity Low_complexity 1 23 0 4 637 264 30 0 0 chr3R 6840153 6840186 -21064867 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 637 228 86 0 0 chr3R 6842119 6842154 -21062899 + (TTG)n Simple_repeat Simple_repeat 2 36 0 4 637 183 80 0 0 chr3R 6842374 6842399 -21062654 + (G)n Simple_repeat Simple_repeat 1 25 0 4 637 23 0 0 0 chr3R 6847835 6847858 -21057195 + AT_rich Low_complexity Low_complexity 1 23 0 4 637 25 31 0 0 chr3R 6848740 6848772 -21056281 + AT_rich Low_complexity Low_complexity 1 32 0 4 637 234 0 0 0 chr3R 6850328 6850354 -21054699 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 637 23 33 0 0 chr3R 6851995 6852025 -21053028 + AT_rich Low_complexity Low_complexity 1 30 0 4 637 206 265 0 0 chr3R 6862829 6862878 -21042175 + T-rich Low_complexity Low_complexity 1 49 0 4 637 219 231 0 0 chr3R 6863286 6863338 -21041715 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 637 246 105 0 0 chr3R 6863647 6863685 -21041368 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 637 220 186 0 0 chr3R 6871607 6871650 -21033403 + (CAG)n Simple_repeat Simple_repeat 2 44 0 4 637 22 56 0 0 chr3R 6872750 6872786 -21032267 + AT_rich Low_complexity Low_complexity 1 36 0 4 637 225 0 0 0 chr3R 6873147 6873172 -21031881 + (CAG)n Simple_repeat Simple_repeat 3 27 0 4 637 222 37 0 0 chr3R 6873642 6873669 -21031384 + (CAG)n Simple_repeat Simple_repeat 3 29 0 4 637 213 94 0 0 chr3R 6873709 6873741 -21031312 + (CAG)n Simple_repeat Simple_repeat 1 32 0 4 637 22 0 0 0 chr3R 6874279 6874301 -21030752 + AT_rich Low_complexity Low_complexity 1 22 0 4 637 21 0 0 0 chr3R 6874470 6874491 -21030562 + AT_rich Low_complexity Low_complexity 1 21 0 4 637 216 122 0 0 chr3R 6874901 6874942 -21030111 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 637 207 200 0 0 chr3R 6875494 6875539 -21029514 + A-rich Low_complexity Low_complexity 1 45 0 4 637 204 40 0 0 chr3R 6879858 6879883 -21025170 + (TGG)n Simple_repeat Simple_repeat 2 26 0 4 637 27 0 0 0 chr3R 6880406 6880433 -21024620 + AT_rich Low_complexity Low_complexity 1 27 0 4 637 399 113 0 0 chr3R 6881243 6881314 -21023739 + (GATTG)n Simple_repeat Simple_repeat 5 75 0 4 637 38 68 0 0 chr3R 6885985 6886058 -21018995 + AT_rich Low_complexity Low_complexity 1 73 0 4 637 183 162 0 0 chr3R 6887192 6887229 -21017824 + (TATATG)n Simple_repeat Simple_repeat 6 42 0 4 637 198 0 0 0 chr3R 6889120 6889142 -21015911 + (CGAAA)n Simple_repeat Simple_repeat 4 25 0 4 637 22 0 0 0 chr3R 6891339 6891361 -21013692 + AT_rich Low_complexity Low_complexity 1 22 0 4 637 3368 5 7 7 chr3R 6891361 6891775 -21013278 - DM297_LTR LTR Gypsy 0 414 1 4 637 6267 9 0 1 chr3R 6891775 6892571 -21012482 - DM297_I LTR Gypsy 0 6167 5373 4 637 33278 7 0 1 chr3R 6892542 6896548 -21008505 - DM297_I LTR Gypsy -2165 4002 1 4 637 3368 5 7 7 chr3R 6896548 6896962 -21008091 - DM297_LTR LTR Gypsy 0 414 1 4 637 279 0 0 0 chr3R 6897160 6897191 -21007862 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 637 210 128 0 0 chr3R 6901401 6901440 -21003613 + (A)n Simple_repeat Simple_repeat 1 39 0 4 637 22 35 0 0 chr3R 6907636 6907665 -20997388 + AT_rich Low_complexity Low_complexity 1 29 0 4 637 189 121 0 0 chr3R 6909778 6909811 -20995242 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 637 21 0 0 0 chr3R 6914413 6914434 -20990619 + AT_rich Low_complexity Low_complexity 1 21 0 4 637 21 36 0 0 chr3R 6915510 6915538 -20989515 + AT_rich Low_complexity Low_complexity 1 28 0 4 637 180 97 0 0 chr3R 6919187 6919218 -20985835 + (A)n Simple_repeat Simple_repeat 1 31 0 4 637 25 31 0 0 chr3R 6923648 6923680 -20981373 + AT_rich Low_complexity Low_complexity 1 32 0 4 637 35 0 0 0 chr3R 6924239 6924274 -20980779 + AT_rich Low_complexity Low_complexity 1 35 0 4 637 25 31 0 0 chr3R 6925411 6925443 -20979610 + AT_rich Low_complexity Low_complexity 1 32 0 4 637 34 72 0 0 chr3R 6926211 6926280 -20978773 + AT_rich Low_complexity Low_complexity 1 69 0 4 637 321 366 6 0 chr3R 6926889 6927064 -20977989 + (CAA)n Simple_repeat Simple_repeat 2 177 0 4 637 336 305 0 0 chr3R 6926965 6927060 -20977993 + (CAG)n Simple_repeat Simple_repeat 1 95 0 4 637 195 189 0 0 chr3R 6928205 6928258 -20976795 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 637 22 0 0 0 chr3R 6930534 6930556 -20974497 + AT_rich Low_complexity Low_complexity 1 22 0 4 637 209 179 0 0 chr3R 6931968 6932007 -20973046 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 637 249 33 0 0 chr3R 6932706 6932736 -20972317 + (CAG)n Simple_repeat Simple_repeat 3 32 0 4 637 35 95 0 0 chr3R 6933205 6933310 -20971743 + AT_rich Low_complexity Low_complexity 1 105 0 4 637 204 190 17 17 chr3R 6933571 6933630 -20971423 + (TTA)n Simple_repeat Simple_repeat 2 60 0 4 637 26 50 0 0 chr3R 6935656 6935696 -20969357 + AT_rich Low_complexity Low_complexity 1 40 0 4 637 21 0 0 0 chr3R 6935862 6935883 -20969170 + AT_rich Low_complexity Low_complexity 1 21 0 4 637 217 231 0 0 chr3R 6936035 6936087 -20968966 + GA-rich Low_complexity Low_complexity 2 53 0 4 637 219 245 0 0 chr3R 6936216 6936269 -20968784 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 637 231 61 0 0 chr3R 6936335 6936368 -20968685 + (GCTG)n Simple_repeat Simple_repeat 2 34 0 4 637 195 42 0 0 chr3R 6936620 6936644 -20968409 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 637 21 82 0 0 chr3R 6937473 6937522 -20967531 + AT_rich Low_complexity Low_complexity 1 49 0 4 637 212 147 0 0 chr3R 6941570 6941604 -20963449 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 4 637 195 42 0 0 chr3R 6942227 6942251 -20962802 + (CAAT)n Simple_repeat Simple_repeat 3 26 0 4 637 201 39 0 0 chr3R 6944031 6944057 -20960996 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 637 207 0 0 0 chr3R 6944165 6944188 -20960865 + (CA)n Simple_repeat Simple_repeat 1 23 0 4 637 21 57 0 0 chr3R 6944655 6944690 -20960363 + AT_rich Low_complexity Low_complexity 1 35 0 4 637 26 82 0 0 chr3R 6945509 6945570 -20959483 + AT_rich Low_complexity Low_complexity 1 61 0 4 638 231 173 0 0 chr3R 6947608 6947660 -20957393 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 638 35 0 0 0 chr3R 6948551 6948586 -20956467 + AT_rich Low_complexity Low_complexity 1 35 0 4 638 225 119 0 0 chr3R 6955005 6955047 -20950006 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 638 22 35 0 0 chr3R 6955976 6956005 -20949048 + AT_rich Low_complexity Low_complexity 1 29 0 4 638 24 53 0 0 chr3R 6961138 6961176 -20943877 + AT_rich Low_complexity Low_complexity 1 38 0 4 638 261 0 0 0 chr3R 6962131 6962160 -20942893 + (CAG)n Simple_repeat Simple_repeat 2 30 0 4 638 222 37 0 0 chr3R 6965915 6965942 -20939111 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 638 23 0 0 0 chr3R 6967505 6967528 -20937525 + AT_rich Low_complexity Low_complexity 1 23 0 4 638 21 36 0 0 chr3R 6972187 6972215 -20932838 + AT_rich Low_complexity Low_complexity 1 28 0 4 638 23 0 0 0 chr3R 6972324 6972347 -20932706 + AT_rich Low_complexity Low_complexity 1 23 0 4 638 27 0 0 0 chr3R 6974132 6974159 -20930894 + AT_rich Low_complexity Low_complexity 1 27 0 4 638 240 35 0 0 chr3R 6974353 6974382 -20930671 + (TA)n Simple_repeat Simple_repeat 1 29 0 4 638 23 0 0 0 chr3R 6974538 6974561 -20930492 + AT_rich Low_complexity Low_complexity 1 23 0 4 638 219 204 0 0 chr3R 6975387 6975436 -20929617 + (TATATG)n Simple_repeat Simple_repeat 6 54 0 4 638 22 56 0 0 chr3R 6976717 6976753 -20928300 + AT_rich Low_complexity Low_complexity 1 36 0 4 638 21 57 0 0 chr3R 6979792 6979827 -20925226 + AT_rich Low_complexity Low_complexity 1 35 0 4 638 29 47 0 0 chr3R 6980142 6980185 -20924868 + AT_rich Low_complexity Low_complexity 1 43 0 4 638 22 0 0 0 chr3R 6982235 6982257 -20922796 + AT_rich Low_complexity Low_complexity 1 22 0 4 638 201 206 14 42 chr3R 6990048 6990119 -20914934 + (TTTA)n Simple_repeat Simple_repeat 3 71 0 4 638 36 23 0 0 chr3R 6996519 6996562 -20908491 + AT_rich Low_complexity Low_complexity 1 43 0 4 638 456 51 0 0 chr3R 6998564 6998623 -20906430 + (TA)n Simple_repeat Simple_repeat 2 60 0 4 638 24 0 0 0 chr3R 7001834 7001858 -20903195 + AT_rich Low_complexity Low_complexity 1 24 0 4 638 213 280 0 26 chr3R 7003902 7003979 -20901074 + A-rich Low_complexity Low_complexity 4 78 0 4 638 234 81 0 0 chr3R 7005073 7005110 -20899943 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 638 35 0 0 0 chr3R 7005652 7005687 -20899366 + AT_rich Low_complexity Low_complexity 1 35 0 4 638 207 139 0 0 chr3R 7009414 7009450 -20895603 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 638 28 29 0 0 chr3R 7009692 7009727 -20895326 + AT_rich Low_complexity Low_complexity 1 35 0 4 638 231 36 0 0 chr3R 7009966 7009994 -20895059 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 4 638 204 97 0 0 chr3R 7012086 7012117 -20892936 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 638 219 69 0 0 chr3R 7012997 7013026 -20892027 + (ATG)n Simple_repeat Simple_repeat 3 31 0 4 638 216 191 0 0 chr3R 7015121 7015168 -20889885 + T-rich Low_complexity Low_complexity 1 47 0 4 638 300 102 0 0 chr3R 7018372 7018421 -20886632 + (A)n Simple_repeat Simple_repeat 1 49 0 4 638 21 57 0 0 chr3R 7019336 7019371 -20885682 + AT_rich Low_complexity Low_complexity 1 35 0 4 638 23 54 0 0 chr3R 7022964 7023001 -20882052 + AT_rich Low_complexity Low_complexity 1 37 0 4 638 21 0 0 0 chr3R 7026634 7026655 -20878398 + AT_rich Low_complexity Low_complexity 1 21 0 4 638 28 0 0 0 chr3R 7027367 7027395 -20877658 + AT_rich Low_complexity Low_complexity 1 28 0 4 638 27 49 0 0 chr3R 7027598 7027639 -20877414 + AT_rich Low_complexity Low_complexity 1 41 0 4 638 24 32 0 0 chr3R 7027662 7027693 -20877360 + AT_rich Low_complexity Low_complexity 1 31 0 4 638 309 118 0 0 chr3R 7029665 7029716 -20875337 + (CAA)n Simple_repeat Simple_repeat 1 51 0 4 638 213 200 0 0 chr3R 7030886 7030926 -20874127 + (CAGC)n Simple_repeat Simple_repeat 2 41 0 4 638 25 31 0 0 chr3R 7038199 7038231 -20866822 + AT_rich Low_complexity Low_complexity 1 32 0 4 638 27 29 0 0 chr3R 7040669 7040703 -20864350 + AT_rich Low_complexity Low_complexity 1 34 0 4 638 238 238 0 0 chr3R 7050521 7050563 -20854490 + (CCG)n Simple_repeat Simple_repeat 2 43 0 4 638 24 91 0 0 chr3R 7056373 7056439 -20848614 + AT_rich Low_complexity Low_complexity 1 66 0 4 638 34 24 0 0 chr3R 7058154 7058195 -20846858 + AT_rich Low_complexity Low_complexity 1 41 0 4 638 214 354 0 0 chr3R 7060272 7060371 -20844682 + (CCG)n Simple_repeat Simple_repeat 2 100 0 4 638 296 114 0 0 chr3R 7060948 7060992 -20844061 - DNAREP1_DM LINE Penelope -105 489 446 4 638 27 29 0 0 chr3R 7061865 7061899 -20843154 + AT_rich Low_complexity Low_complexity 1 34 0 4 638 22 0 0 0 chr3R 7064509 7064531 -20840522 + AT_rich Low_complexity Low_complexity 1 22 0 4 638 206 236 0 0 chr3R 7071132 7071187 -20833866 + (CCA)n Simple_repeat Simple_repeat 2 56 0 4 638 302 163 11 0 chr3R 7072951 7073018 -20832035 + DNAREP1_DM LINE Penelope 443 489 -105 4 638 203 158 0 0 chr3R 7074400 7074438 -20830615 + CT-rich Low_complexity Low_complexity 2 39 0 4 638 423 155 0 0 chr3R 7074926 7075010 -20830043 + (TTGG)n Simple_repeat Simple_repeat 3 86 0 4 638 333 0 0 0 chr3R 7075686 7075723 -20829330 + (GACTG)n Simple_repeat Simple_repeat 1 37 0 4 638 205 195 0 0 chr3R 7075799 7075840 -20829213 + T-rich Low_complexity Low_complexity 4 44 0 4 638 21 89 0 0 chr3R 7076711 7076767 -20828286 + AT_rich Low_complexity Low_complexity 1 56 0 4 638 41 21 0 0 chr3R 7077710 7077758 -20827295 + AT_rich Low_complexity Low_complexity 1 48 0 4 639 21 36 0 0 chr3R 7078536 7078564 -20826489 + AT_rich Low_complexity Low_complexity 1 28 0 4 639 24 0 0 0 chr3R 7078705 7078729 -20826324 + AT_rich Low_complexity Low_complexity 1 24 0 4 639 23 33 0 0 chr3R 7078805 7078835 -20826218 + AT_rich Low_complexity Low_complexity 1 30 0 4 639 252 77 0 0 chr3R 7079710 7079749 -20825304 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 639 186 71 0 0 chr3R 7080344 7080372 -20824681 + (TC)n Simple_repeat Simple_repeat 2 29 0 4 639 230 152 17 0 chr3R 7081757 7081816 -20823237 + (CTG)n Simple_repeat Simple_repeat 1 60 0 4 639 228 154 0 0 chr3R 7083383 7083435 -20821618 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 639 243 140 0 0 chr3R 7083730 7083780 -20821273 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 639 192 40 0 0 chr3R 7084290 7084315 -20820738 + (TTTTTA)n Simple_repeat Simple_repeat 6 30 0 4 639 33 43 0 0 chr3R 7084396 7084443 -20820610 + AT_rich Low_complexity Low_complexity 1 47 0 4 639 22 56 0 0 chr3R 7085366 7085402 -20819651 + AT_rich Low_complexity Low_complexity 1 36 0 4 639 22 0 0 0 chr3R 7085985 7086007 -20819046 + AT_rich Low_complexity Low_complexity 1 22 0 4 639 203 0 37 0 chr3R 7086811 7086838 -20818215 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 639 218 116 23 0 chr3R 7086904 7086947 -20818106 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 639 33 56 0 0 chr3R 7089114 7089168 -20815885 + AT_rich Low_complexity Low_complexity 1 54 0 4 639 231 88 0 0 chr3R 7089937 7089971 -20815082 + (CAA)n Simple_repeat Simple_repeat 3 36 0 4 639 24 32 0 0 chr3R 7090714 7090745 -20814308 + AT_rich Low_complexity Low_complexity 1 31 0 4 639 22 35 0 0 chr3R 7092284 7092313 -20812740 + AT_rich Low_complexity Low_complexity 1 29 0 4 639 22 0 0 0 chr3R 7093002 7093024 -20812029 + AT_rich Low_complexity Low_complexity 1 22 0 4 639 28 61 0 0 chr3R 7094715 7094764 -20810289 + AT_rich Low_complexity Low_complexity 1 49 0 4 639 35 54 0 0 chr3R 7095107 7095163 -20809890 + AT_rich Low_complexity Low_complexity 1 56 0 4 639 183 42 0 0 chr3R 7095715 7095739 -20809314 + (CAAAG)n Simple_repeat Simple_repeat 1 24 0 4 639 216 0 0 0 chr3R 7096454 7096478 -20808575 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 639 24 0 0 0 chr3R 7097375 7097399 -20807654 + AT_rich Low_complexity Low_complexity 1 24 0 4 639 228 135 0 0 chr3R 7097605 7097642 -20807411 + (ATG)n Simple_repeat Simple_repeat 1 37 0 4 639 215 236 0 0 chr3R 7100508 7100563 -20804490 + T-rich Low_complexity Low_complexity 1 55 0 4 639 210 191 0 0 chr3R 7100616 7100658 -20804395 + (TTG)n Simple_repeat Simple_repeat 1 42 0 4 639 189 0 0 0 chr3R 7101634 7101655 -20803398 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 639 210 300 0 0 chr3R 7101852 7101902 -20803151 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 639 25 0 0 0 chr3R 7102212 7102237 -20802816 + AT_rich Low_complexity Low_complexity 1 25 0 4 639 192 152 0 0 chr3R 7102345 7102378 -20802675 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 639 23 33 0 0 chr3R 7106998 7107028 -20798025 + AT_rich Low_complexity Low_complexity 1 30 0 4 639 29 0 0 0 chr3R 7107198 7107227 -20797826 + AT_rich Low_complexity Low_complexity 1 29 0 4 639 246 220 0 0 chr3R 7107652 7107711 -20797342 + (CA)n Simple_repeat Simple_repeat 1 59 0 4 639 212 218 0 35 chr3R 7107865 7107922 -20797131 + (CAG)n Simple_repeat Simple_repeat 2 56 0 4 639 204 40 0 0 chr3R 7107987 7108012 -20797041 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 639 21 0 0 0 chr3R 7109290 7109311 -20795742 + AT_rich Low_complexity Low_complexity 1 21 0 4 639 27 29 0 0 chr3R 7109492 7109526 -20795527 + AT_rich Low_complexity Low_complexity 1 34 0 4 639 36 70 0 0 chr3R 7112571 7112642 -20792411 + AT_rich Low_complexity Low_complexity 1 71 0 4 639 195 42 0 0 chr3R 7118975 7118999 -20786054 + (GAGTG)n Simple_repeat Simple_repeat 3 26 0 4 639 21 0 0 0 chr3R 7120416 7120437 -20784616 + AT_rich Low_complexity Low_complexity 1 21 0 4 639 21 0 0 0 chr3R 7121889 7121910 -20783143 + AT_rich Low_complexity Low_complexity 1 21 0 4 639 300 53 0 0 chr3R 7124421 7124459 -20780594 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 639 232 314 0 0 chr3R 7124539 7124609 -20780444 + C-rich Low_complexity Low_complexity 5 74 0 4 639 219 69 0 0 chr3R 7124813 7124842 -20780211 + (TCG)n Simple_repeat Simple_repeat 1 29 0 4 639 231 161 0 0 chr3R 7126602 7126658 -20778395 + (TTGG)n Simple_repeat Simple_repeat 3 58 0 4 639 201 138 0 0 chr3R 7126883 7126912 -20778141 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 639 22 0 0 0 chr3R 7128084 7128106 -20776947 + AT_rich Low_complexity Low_complexity 1 22 0 4 639 225 143 212 45 chr3R 7128979 7129045 -20776008 + TABOR_LTR LTR Gypsy 273 349 -157 4 639 228 100 0 0 chr3R 7131023 7131063 -20773990 + (GTCTG)n Simple_repeat Simple_repeat 5 44 0 4 639 26 50 0 0 chr3R 7132479 7132519 -20772534 + AT_rich Low_complexity Low_complexity 1 40 0 4 639 25 65 0 0 chr3R 7136942 7136988 -20768065 + AT_rich Low_complexity Low_complexity 1 46 0 4 639 935 188 0 5 chr3R 7138489 7138687 -20766366 + XDMR Unknown Unknown 146 342 -19 4 639 201 154 0 0 chr3R 7139437 7139476 -20765577 + A-rich Low_complexity Low_complexity 1 39 0 4 639 22 0 0 0 chr3R 7142245 7142267 -20762786 + AT_rich Low_complexity Low_complexity 1 22 0 4 639 360 88 0 0 chr3R 7142555 7142612 -20762441 + (TCCA)n Simple_repeat Simple_repeat 3 59 0 4 639 198 0 0 0 chr3R 7143949 7143971 -20761082 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 639 23 0 0 0 chr3R 7145359 7145382 -20759671 + AT_rich Low_complexity Low_complexity 1 23 0 4 639 192 77 0 0 chr3R 7145995 7146021 -20759032 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 4 639 31 0 0 0 chr3R 7147775 7147806 -20757247 + AT_rich Low_complexity Low_complexity 1 31 0 4 639 23 0 0 0 chr3R 7147932 7147955 -20757098 + AT_rich Low_complexity Low_complexity 1 23 0 4 639 29 0 0 0 chr3R 7149261 7149290 -20755763 + AT_rich Low_complexity Low_complexity 1 29 0 4 639 189 74 0 0 chr3R 7151131 7151158 -20753895 + (CTG)n Simple_repeat Simple_repeat 3 29 0 4 639 183 42 0 0 chr3R 7151333 7151357 -20753696 + (CAG)n Simple_repeat Simple_repeat 3 26 0 4 639 213 108 0 0 chr3R 7152294 7152331 -20752722 + (CAAAC)n Simple_repeat Simple_repeat 3 39 0 4 639 329 131 16 0 chr3R 7152598 7152659 -20752394 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 639 200 216 20 0 chr3R 7153749 7153800 -20751253 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 639 197 33 33 0 chr3R 7154324 7154354 -20750699 + (CAGG)n Simple_repeat Simple_repeat 2 32 0 4 639 210 256 0 49 chr3R 7154461 7154543 -20750510 + A-rich Low_complexity Low_complexity 2 79 0 4 639 240 207 0 0 chr3R 7155512 7155570 -20749483 + A-rich Low_complexity Low_complexity 1 58 0 4 639 243 177 0 0 chr3R 7156860 7156922 -20748131 + GA-rich Low_complexity Low_complexity 2 63 0 4 639 192 158 0 0 chr3R 7157330 7157368 -20747685 + (ATG)n Simple_repeat Simple_repeat 3 40 0 4 639 213 65 0 0 chr3R 7157963 7157994 -20747059 + (CAACG)n Simple_repeat Simple_repeat 2 32 0 4 639 206 115 48 16 chr3R 7158293 7158355 -20746698 + (TA)n Simple_repeat Simple_repeat 1 64 0 4 639 258 148 0 0 chr3R 7158488 7158542 -20746511 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 639 213 180 0 0 chr3R 7158562 7158612 -20746441 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 639 246 81 0 0 chr3R 7160465 7160502 -20744551 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 639 223 233 27 0 chr3R 7160706 7160779 -20744274 + A-rich Low_complexity Low_complexity 2 76 0 4 639 186 103 0 0 chr3R 7161416 7161445 -20743608 + (GA)n Simple_repeat Simple_repeat 2 30 0 4 639 26 0 0 0 chr3R 7162036 7162062 -20742991 + AT_rich Low_complexity Low_complexity 1 26 0 4 639 198 167 0 0 chr3R 7162218 7162254 -20742799 + (CAG)n Simple_repeat Simple_repeat 2 37 0 4 639 36 0 0 0 chr3R 7162468 7162504 -20742549 + AT_rich Low_complexity Low_complexity 1 36 0 4 639 180 97 0 0 chr3R 7162505 7162536 -20742517 + (A)n Simple_repeat Simple_repeat 1 31 0 4 639 185 0 23 91 chr3R 7162624 7162668 -20742385 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 4 639 26 64 0 0 chr3R 7163695 7163742 -20741311 + AT_rich Low_complexity Low_complexity 1 47 0 4 639 27 0 0 0 chr3R 7163919 7163946 -20741107 + AT_rich Low_complexity Low_complexity 1 27 0 4 639 220 204 0 0 chr3R 7164741 7164795 -20740258 + A-rich Low_complexity Low_complexity 1 54 0 4 639 26 30 0 0 chr3R 7164927 7164960 -20740093 + AT_rich Low_complexity Low_complexity 1 33 0 4 639 22 35 0 0 chr3R 7165056 7165085 -20739968 + AT_rich Low_complexity Low_complexity 1 29 0 4 639 25 31 0 0 chr3R 7165156 7165188 -20739865 + AT_rich Low_complexity Low_complexity 1 32 0 4 639 198 0 0 0 chr3R 7165533 7165555 -20739498 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 639 279 0 0 0 chr3R 7165997 7166028 -20739025 + (TC)n Simple_repeat Simple_repeat 1 31 0 4 639 201 244 0 0 chr3R 7166374 7166415 -20738638 + (CCTG)n Simple_repeat Simple_repeat 4 44 0 4 639 24 0 0 0 chr3R 7171950 7171974 -20733079 + AT_rich Low_complexity Low_complexity 1 24 0 4 639 222 37 0 0 chr3R 7177692 7177719 -20727334 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 639 183 184 0 0 chr3R 7181101 7181139 -20723914 + (TTCA)n Simple_repeat Simple_repeat 2 39 0 4 639 180 97 0 0 chr3R 7183635 7183666 -20721387 + (T)n Simple_repeat Simple_repeat 1 31 0 4 639 27 0 0 0 chr3R 7184009 7184036 -20721017 + AT_rich Low_complexity Low_complexity 1 27 0 4 639 273 128 0 0 chr3R 7184539 7184586 -20720467 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 639 210 71 0 0 chr3R 7185327 7185355 -20719698 + (G)n Simple_repeat Simple_repeat 1 28 0 4 639 207 0 0 0 chr3R 7191329 7191352 -20713701 + (A)n Simple_repeat Simple_repeat 1 23 0 4 639 198 136 0 0 chr3R 7194352 7194396 -20710657 + (TCC)n Simple_repeat Simple_repeat 1 44 0 4 639 198 136 0 0 chr3R 7196687 7196731 -20708322 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 639 283 224 0 0 chr3R 7198013 7198098 -20706955 + ROO_I LTR Pao 650 734 -7522 4 639 207 255 0 0 chr3R 7198244 7198295 -20706758 + GA-rich Low_complexity Low_complexity 2 52 0 4 639 312 120 0 0 chr3R 7198351 7198401 -20706652 + (CAG)n Simple_repeat Simple_repeat 1 50 0 4 639 210 71 0 0 chr3R 7198418 7198446 -20706607 + (CGA)n Simple_repeat Simple_repeat 3 30 0 4 639 357 200 52 10 chr3R 7198706 7198802 -20706251 + ROO_I LTR Pao 645 744 -7512 4 639 225 167 0 0 chr3R 7199566 7199608 -20705445 + (CAG)n Simple_repeat Simple_repeat 3 44 0 4 639 221 319 11 0 chr3R 7199749 7199840 -20705213 + (CAG)n Simple_repeat Simple_repeat 3 94 0 4 639 234 198 0 62 chr3R 7200962 7201059 -20703994 + ROO_I LTR Pao 641 731 -7525 4 639 232 215 38 0 chr3R 7201062 7201141 -20703912 + ROO_I LTR Pao 648 729 -7527 4 639 311 148 15 62 chr3R 7201630 7201760 -20703293 + (CAG)n Simple_repeat Simple_repeat 3 126 0 4 639 292 149 33 33 chr3R 7202147 7202237 -20702816 + (CAG)n Simple_repeat Simple_repeat 1 90 0 4 639 414 100 0 0 chr3R 7202378 7202438 -20702615 + (CAG)n Simple_repeat Simple_repeat 1 60 0 4 639 219 36 0 0 chr3R 7203035 7203063 -20701990 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 639 189 0 0 0 chr3R 7204846 7204867 -20700186 + (T)n Simple_repeat Simple_repeat 1 21 0 4 639 3968 5 0 0 chr3R 7205012 7205440 -20699613 - ROO_LTR LTR Pao 0 428 1 4 79 73712 2 3 2 chr3R 7205440 7213680 -20691373 - ROO_I LTR Pao 0 8256 1 4 640 3938 5 0 2 chr3R 7213680 7214109 -20690944 - ROO_LTR LTR Pao 0 428 1 4 640 303 104 0 0 chr3R 7215056 7215104 -20689949 + (CAA)n Simple_repeat Simple_repeat 3 50 0 4 640 266 197 28 0 chr3R 7215418 7215489 -20689564 + (CA)n Simple_repeat Simple_repeat 2 74 0 4 640 183 42 0 0 chr3R 7215620 7215644 -20689409 + (TC)n Simple_repeat Simple_repeat 2 25 0 4 640 207 0 0 0 chr3R 7216444 7216467 -20688586 + (CAG)n Simple_repeat Simple_repeat 2 24 0 4 640 195 139 0 0 chr3R 7216610 7216646 -20688407 + (CAG)n Simple_repeat Simple_repeat 3 38 0 4 640 186 103 0 0 chr3R 7216993 7217022 -20688031 + (GA)n Simple_repeat Simple_repeat 1 29 0 4 640 200 200 0 0 chr3R 7217889 7217934 -20687119 + (CCA)n Simple_repeat Simple_repeat 1 45 0 4 640 216 0 0 0 chr3R 7218644 7218668 -20686385 + (GA)n Simple_repeat Simple_repeat 1 24 0 4 640 180 228 0 0 chr3R 7219715 7219772 -20685281 + (CAGT)n Simple_repeat Simple_repeat 4 60 0 4 640 252 59 0 0 chr3R 7221211 7221245 -20683808 + (CCAA)n Simple_repeat Simple_repeat 4 37 0 4 640 230 81 0 26 chr3R 7223923 7223961 -20681092 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 4 640 216 97 0 0 chr3R 7224600 7224631 -20680422 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 640 221 191 29 29 chr3R 7226716 7226786 -20678267 + A-rich Low_complexity Low_complexity 5 74 0 4 640 219 225 11 53 chr3R 7227384 7227478 -20677575 + (CAA)n Simple_repeat Simple_repeat 1 90 0 4 640 236 264 0 0 chr3R 7228617 7228689 -20676364 + A-rich Low_complexity Low_complexity 1 72 0 4 640 22 0 0 0 chr3R 7229043 7229065 -20675988 + AT_rich Low_complexity Low_complexity 1 22 0 4 640 208 238 0 31 chr3R 7232510 7232575 -20672478 + (CAAAG)n Simple_repeat Simple_repeat 2 64 0 4 640 188 34 0 33 chr3R 7233013 7233043 -20672010 + (CACAC)n Simple_repeat Simple_repeat 2 30 0 4 640 28 70 0 34 chr3R 7235650 7235739 -20669314 + AT_rich Low_complexity Low_complexity 1 86 0 4 640 22 56 0 0 chr3R 7238135 7238171 -20666882 + AT_rich Low_complexity Low_complexity 1 36 0 4 640 22 70 0 0 chr3R 7247583 7247626 -20657427 + AT_rich Low_complexity Low_complexity 1 43 0 4 640 229 145 69 42 chr3R 7255614 7255686 -20649367 + (TTATA)n Simple_repeat Simple_repeat 3 76 0 4 640 30 45 0 0 chr3R 7259196 7259240 -20645813 + AT_rich Low_complexity Low_complexity 1 44 0 4 640 26 64 0 0 chr3R 7263310 7263357 -20641696 + AT_rich Low_complexity Low_complexity 1 47 0 4 640 256 277 0 0 chr3R 7263937 7264020 -20641033 + CT-rich Low_complexity Low_complexity 2 84 0 4 640 217 224 17 0 chr3R 7266907 7266965 -20638088 + (CGG)n Simple_repeat Simple_repeat 2 60 0 4 640 25 0 0 0 chr3R 7267120 7267145 -20637908 + AT_rich Low_complexity Low_complexity 1 25 0 4 640 261 57 0 0 chr3R 7268007 7268042 -20637011 + (CACCAT)n Simple_repeat Simple_repeat 1 35 0 4 640 31 58 0 0 chr3R 7269838 7269890 -20635163 + AT_rich Low_complexity Low_complexity 1 52 0 4 640 27 29 0 0 chr3R 7271726 7271760 -20633293 + AT_rich Low_complexity Low_complexity 1 34 0 4 640 46 19 0 0 chr3R 7272317 7272370 -20632683 + AT_rich Low_complexity Low_complexity 1 53 0 4 640 338 318 0 0 chr3R 7273295 7273405 -20631648 + CT-rich Low_complexity Low_complexity 2 111 0 4 640 180 77 0 0 chr3R 7276680 7276706 -20628347 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 640 21 0 0 0 chr3R 7278123 7278144 -20626909 + AT_rich Low_complexity Low_complexity 1 21 0 4 640 22 0 0 0 chr3R 7280381 7280403 -20624650 + AT_rich Low_complexity Low_complexity 1 22 0 4 640 201 300 0 0 chr3R 7282429 7282509 -20622544 + A-rich Low_complexity Low_complexity 1 80 0 4 640 183 80 0 0 chr3R 7283072 7283097 -20621956 + (CATATA)n Simple_repeat Simple_repeat 6 30 0 4 640 226 136 46 119 chr3R 7283335 7283444 -20621609 - ROO_I LTR Pao -7515 741 641 4 640 384 94 11 56 chr3R 7283506 7283596 -20621457 + (TTTG)n Simple_repeat Simple_repeat 1 86 0 4 640 227 232 0 12 chr3R 7283797 7283880 -20621173 + (CTG)n Simple_repeat Simple_repeat 3 84 0 4 640 192 231 0 0 chr3R 7284014 7284066 -20620987 + (CTG)n Simple_repeat Simple_repeat 1 52 0 4 640 201 121 0 0 chr3R 7288168 7288201 -20616852 + (AACTG)n Simple_repeat Simple_repeat 3 35 0 4 640 240 154 0 0 chr3R 7293702 7293754 -20611299 + (CAGT)n Simple_repeat Simple_repeat 4 55 0 4 640 243 210 0 100 chr3R 7295217 7295307 -20609746 + ROO_I LTR Pao 654 734 -7522 4 640 22 0 0 0 chr3R 7296412 7296434 -20608619 + AT_rich Low_complexity Low_complexity 1 22 0 4 640 218 211 17 17 chr3R 7297006 7297064 -20607989 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 640 228 163 0 0 chr3R 7297224 7297267 -20607786 + (CACCAT)n Simple_repeat Simple_repeat 6 48 0 4 640 232 228 0 0 chr3R 7297742 7297799 -20607254 + GA-rich Low_complexity Low_complexity 3 59 0 4 640 249 98 0 0 chr3R 7300205 7300246 -20604807 + (CAG)n Simple_repeat Simple_repeat 3 43 0 4 640 225 65 0 0 chr3R 7301597 7301628 -20603425 + (GCTG)n Simple_repeat Simple_repeat 4 34 0 4 640 213 163 0 0 chr3R 7302350 7302399 -20602654 + (CTGTG)n Simple_repeat Simple_repeat 2 50 0 4 640 235 0 57 0 chr3R 7302738 7302773 -20602280 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 640 248 203 26 26 chr3R 7306496 7306572 -20598481 + (CACCAT)n Simple_repeat Simple_repeat 4 79 0 4 640 186 43 0 0 chr3R 7308862 7308885 -20596168 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 640 229 273 0 0 chr3R 7309409 7309464 -20595589 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 640 24 0 0 0 chr3R 7311748 7311772 -20593281 + AT_rich Low_complexity Low_complexity 1 24 0 4 640 186 191 0 0 chr3R 7312220 7312267 -20592786 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 640 288 127 0 0 chr3R 7315541 7315596 -20589457 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 640 26 0 0 0 chr3R 7316230 7316256 -20588797 + AT_rich Low_complexity Low_complexity 1 26 0 4 640 311 78 20 0 chr3R 7318892 7318943 -20586110 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 640 24 0 0 0 chr3R 7319994 7320018 -20585035 + AT_rich Low_complexity Low_complexity 1 24 0 4 640 31 0 0 0 chr3R 7320435 7320466 -20584587 + AT_rich Low_complexity Low_complexity 1 31 0 4 640 22 0 0 0 chr3R 7321918 7321940 -20583113 + AT_rich Low_complexity Low_complexity 1 22 0 4 640 209 160 40 0 chr3R 7321965 7322015 -20583038 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 640 215 121 0 83 chr3R 7322932 7323004 -20582049 + (CATCC)n Simple_repeat Simple_repeat 3 68 0 4 640 218 255 21 0 chr3R 7323113 7323160 -20581893 + (CTG)n Simple_repeat Simple_repeat 1 48 0 4 640 183 80 0 0 chr3R 7325122 7325147 -20579906 + (CAG)n Simple_repeat Simple_repeat 2 26 0 4 640 180 214 0 0 chr3R 7326684 7326740 -20578313 + (CGAGT)n Simple_repeat Simple_repeat 5 60 0 4 640 297 244 0 0 chr3R 7328752 7328838 -20576215 + (TCTG)n Simple_repeat Simple_repeat 3 88 0 4 640 225 83 0 0 chr3R 7332803 7332839 -20572214 + (CTG)n Simple_repeat Simple_repeat 3 38 0 4 640 243 61 0 0 chr3R 7333752 7333785 -20571268 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 640 22 0 0 0 chr3R 7335569 7335591 -20569462 + AT_rich Low_complexity Low_complexity 1 22 0 4 640 234 0 0 0 chr3R 7337043 7337069 -20567984 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 640 231 173 0 0 chr3R 7337864 7337916 -20567137 + (CTG)n Simple_repeat Simple_repeat 2 53 0 4 640 335 105 0 17 chr3R 7338186 7338244 -20566809 + (CTG)n Simple_repeat Simple_repeat 3 59 0 4 641 253 125 0 20 chr3R 7341508 7341557 -20563496 + ROO_I LTR Pao 704 751 -7505 4 641 222 116 0 0 chr3R 7343754 7343797 -20561256 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 641 200 195 0 0 chr3R 7344001 7344042 -20561011 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 641 226 274 0 0 chr3R 7345085 7345136 -20559917 + (CTG)n Simple_repeat Simple_repeat 3 53 0 4 641 198 71 0 0 chr3R 7350280 7350308 -20554745 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 641 186 171 0 0 chr3R 7350391 7350432 -20554621 + CT-rich Low_complexity Low_complexity 4 44 0 4 641 216 167 0 0 chr3R 7351921 7351969 -20553084 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 641 23 0 0 0 chr3R 7352634 7352657 -20552396 + AT_rich Low_complexity Low_complexity 1 23 0 4 641 26 0 0 0 chr3R 7354791 7354817 -20550236 + AT_rich Low_complexity Low_complexity 1 26 0 4 641 208 196 0 38 chr3R 7355553 7355606 -20549447 + (CCCA)n Simple_repeat Simple_repeat 3 53 0 4 641 186 71 0 0 chr3R 7356083 7356111 -20548942 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 641 315 71 0 0 chr3R 7356796 7356838 -20548215 + (TTG)n Simple_repeat Simple_repeat 1 42 0 4 641 219 88 0 0 chr3R 7357940 7357974 -20547079 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 641 195 69 0 0 chr3R 7358118 7358147 -20546906 + (TTC)n Simple_repeat Simple_repeat 1 29 0 4 641 219 219 0 0 chr3R 7358207 7358248 -20546805 + (GCTG)n Simple_repeat Simple_repeat 3 43 0 4 641 237 169 41 27 chr3R 7358734 7358807 -20546246 + (CA)n Simple_repeat Simple_repeat 1 74 0 4 641 270 56 0 0 chr3R 7359566 7359602 -20545451 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 641 195 100 0 0 chr3R 7360019 7360049 -20545004 + (CCTG)n Simple_repeat Simple_repeat 2 31 0 4 641 27 0 0 0 chr3R 7363239 7363266 -20541787 + AT_rich Low_complexity Low_complexity 1 27 0 4 641 26 0 0 0 chr3R 7366493 7366519 -20538534 + AT_rich Low_complexity Low_complexity 1 26 0 4 641 276 77 0 0 chr3R 7369009 7369048 -20536005 + (TC)n Simple_repeat Simple_repeat 2 40 0 4 641 225 65 0 0 chr3R 7370113 7370144 -20534909 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 641 195 69 0 0 chr3R 7373943 7373972 -20531081 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 641 22 0 0 0 chr3R 7374383 7374405 -20530648 + AT_rich Low_complexity Low_complexity 1 22 0 4 641 227 143 41 0 chr3R 7375386 7375435 -20529618 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 641 341 43 21 0 chr3R 7375564 7375611 -20529442 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 641 296 269 0 0 chr3R 7376058 7376151 -20528902 + (CTG)n Simple_repeat Simple_repeat 1 93 0 4 641 315 71 0 0 chr3R 7377116 7377158 -20527895 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 641 241 250 0 0 chr3R 7378212 7378280 -20526773 + T-rich Low_complexity Low_complexity 1 68 0 4 641 207 170 0 0 chr3R 7380737 7380784 -20524269 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 641 252 122 0 0 chr3R 7381029 7381070 -20523983 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 641 280 191 11 43 chr3R 7381732 7381825 -20523228 - ROO_I LTR Pao -7526 730 641 4 641 22 56 0 0 chr3R 7389681 7389717 -20515336 + AT_rich Low_complexity Low_complexity 1 36 0 4 641 22 0 0 0 chr3R 7390594 7390616 -20514437 + AT_rich Low_complexity Low_complexity 1 22 0 4 641 26 50 0 0 chr3R 7393434 7393474 -20511579 + AT_rich Low_complexity Low_complexity 1 40 0 4 641 2422 18 33 0 chr3R 7394076 7394350 -20510703 - G5_DM LINE Jockey -524 4332 4050 4 641 249 132 0 0 chr3R 7398146 7398184 -20506869 - ARS406_DM Unknown Unknown -1 352 315 4 641 204 214 24 0 chr3R 7407500 7407542 -20497511 + (CAG)n Simple_repeat Simple_repeat 1 43 0 4 641 25 0 0 0 chr3R 7411595 7411620 -20493433 + AT_rich Low_complexity Low_complexity 1 25 0 4 641 213 121 0 0 chr3R 7413356 7413389 -20491664 + (TGG)n Simple_repeat Simple_repeat 3 35 0 4 641 213 39 0 0 chr3R 7417780 7417806 -20487247 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 4 641 27 29 0 0 chr3R 7417851 7417885 -20487168 + AT_rich Low_complexity Low_complexity 1 34 0 4 641 22 0 0 0 chr3R 7418605 7418627 -20486426 + AT_rich Low_complexity Low_complexity 1 22 0 4 641 216 149 0 0 chr3R 7421871 7421918 -20483135 + (T)n Simple_repeat Simple_repeat 1 47 0 4 641 214 244 0 0 chr3R 7422892 7422937 -20482116 + (CAGC)n Simple_repeat Simple_repeat 3 47 0 4 641 204 111 0 0 chr3R 7424563 7424599 -20480454 + (GAAAA)n Simple_repeat Simple_repeat 1 36 0 4 641 231 146 0 0 chr3R 7426140 7426181 -20478872 + (T)n Simple_repeat Simple_repeat 1 41 0 4 641 235 179 30 0 chr3R 7427783 7427850 -20477203 + (CGGA)n Simple_repeat Simple_repeat 4 72 0 4 641 183 42 0 0 chr3R 7428889 7428913 -20476140 + (GCTTG)n Simple_repeat Simple_repeat 3 26 0 4 641 216 0 0 0 chr3R 7430383 7430407 -20474646 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 641 27 49 0 0 chr3R 7432641 7432682 -20472371 + AT_rich Low_complexity Low_complexity 1 41 0 4 641 207 0 0 0 chr3R 7433002 7433025 -20472028 + (CATCG)n Simple_repeat Simple_repeat 5 27 0 4 641 219 36 0 0 chr3R 7433316 7433344 -20471709 + (T)n Simple_repeat Simple_repeat 1 28 0 4 641 238 211 0 17 chr3R 7441525 7441583 -20463470 + (CAGG)n Simple_repeat Simple_repeat 1 57 0 4 641 26 50 0 0 chr3R 7448962 7449002 -20456051 + AT_rich Low_complexity Low_complexity 1 40 0 4 641 27 29 0 0 chr3R 7450604 7450638 -20454415 + AT_rich Low_complexity Low_complexity 1 34 0 4 641 22 0 0 0 chr3R 7458755 7458777 -20446276 + AT_rich Low_complexity Low_complexity 1 22 0 4 641 26 30 0 0 chr3R 7458832 7458865 -20446188 + AT_rich Low_complexity Low_complexity 1 33 0 4 641 30 27 0 0 chr3R 7459160 7459197 -20445856 + AT_rich Low_complexity Low_complexity 1 37 0 4 641 21 36 0 0 chr3R 7459529 7459557 -20445496 + AT_rich Low_complexity Low_complexity 1 28 0 4 641 206 286 0 38 chr3R 7462451 7462531 -20442522 + (CGG)n Simple_repeat Simple_repeat 2 78 0 4 641 208 122 0 58 chr3R 7462562 7462614 -20442439 + (CTG)n Simple_repeat Simple_repeat 3 51 0 4 641 21 0 0 0 chr3R 7462755 7462776 -20442277 + AT_rich Low_complexity Low_complexity 1 21 0 4 641 180 0 0 0 chr3R 7467205 7467225 -20437828 + (TTGTG)n Simple_repeat Simple_repeat 1 20 0 4 642 225 196 0 0 chr3R 7471209 7471255 -20433798 + T-rich Low_complexity Low_complexity 1 46 0 4 642 255 31 0 0 chr3R 7471662 7471694 -20433359 + (A)n Simple_repeat Simple_repeat 1 32 0 4 642 25 0 0 0 chr3R 7471928 7471953 -20433100 + AT_rich Low_complexity Low_complexity 1 25 0 4 642 23 0 0 0 chr3R 7472375 7472398 -20432655 + AT_rich Low_complexity Low_complexity 1 23 0 4 642 203 184 0 0 chr3R 7472617 7472655 -20432398 + T-rich Low_complexity Low_complexity 4 41 0 4 642 205 208 19 0 chr3R 7472754 7472807 -20432246 + A-rich Low_complexity Low_complexity 4 57 0 4 642 27 0 0 0 chr3R 7473221 7473248 -20431805 + AT_rich Low_complexity Low_complexity 1 27 0 4 642 285 29 0 0 chr3R 7474694 7474728 -20430325 + (GA)n Simple_repeat Simple_repeat 1 34 0 4 642 278 273 0 26 chr3R 7475823 7475936 -20429117 + (TTG)n Simple_repeat Simple_repeat 2 111 0 4 642 22 0 0 0 chr3R 7481657 7481679 -20423374 + AT_rich Low_complexity Low_complexity 1 22 0 4 642 21 0 0 0 chr3R 7491862 7491883 -20413170 + AT_rich Low_complexity Low_complexity 1 21 0 4 642 31 0 0 0 chr3R 7491951 7491982 -20413071 + AT_rich Low_complexity Low_complexity 1 31 0 4 642 301 360 0 0 chr3R 7495081 7495234 -20409819 + (CAG)n Simple_repeat Simple_repeat 3 155 0 4 642 228 281 0 0 chr3R 7495990 7496072 -20408981 + (CAA)n Simple_repeat Simple_repeat 3 84 0 4 642 24 85 0 0 chr3R 7515355 7515414 -20389639 + AT_rich Low_complexity Low_complexity 1 59 0 4 642 22 0 0 0 chr3R 7519132 7519154 -20385899 + AT_rich Low_complexity Low_complexity 1 22 0 4 642 24 0 0 0 chr3R 7520243 7520267 -20384786 + AT_rich Low_complexity Low_complexity 1 24 0 4 642 21 0 0 0 chr3R 7520394 7520415 -20384638 + AT_rich Low_complexity Low_complexity 1 21 0 4 642 228 35 0 0 chr3R 7524680 7524709 -20380344 + (AGCTG)n Simple_repeat Simple_repeat 1 29 0 4 642 26 0 0 0 chr3R 7531954 7531980 -20373073 + AT_rich Low_complexity Low_complexity 1 26 0 4 642 189 0 0 0 chr3R 7532739 7532760 -20372293 + (T)n Simple_repeat Simple_repeat 1 21 0 4 642 204 264 0 0 chr3R 7533354 7533407 -20371646 + C-rich Low_complexity Low_complexity 6 58 0 4 642 21 36 0 0 chr3R 7541615 7541643 -20363410 + AT_rich Low_complexity Low_complexity 1 28 0 4 642 21 0 0 0 chr3R 7541918 7541939 -20363114 + AT_rich Low_complexity Low_complexity 1 21 0 4 642 207 114 0 0 chr3R 7542176 7542211 -20362842 + (GGAGA)n Simple_repeat Simple_repeat 1 35 0 4 642 26 0 0 0 chr3R 7547998 7548024 -20357029 + AT_rich Low_complexity Low_complexity 1 26 0 4 642 225 94 0 0 chr3R 7548561 7548593 -20356460 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 642 180 0 0 0 chr3R 7555132 7555152 -20349901 + (CGA)n Simple_repeat Simple_repeat 2 21 0 4 642 228 67 0 0 chr3R 7557367 7557397 -20347656 + (TA)n Simple_repeat Simple_repeat 2 31 0 4 642 228 67 0 0 chr3R 7559249 7559279 -20345774 + (CAGAA)n Simple_repeat Simple_repeat 4 33 0 4 642 23 97 0 0 chr3R 7578251 7578323 -20326730 + AT_rich Low_complexity Low_complexity 1 72 0 4 642 231 61 0 0 chr3R 7578478 7578511 -20326542 + (T)n Simple_repeat Simple_repeat 1 33 0 4 642 235 204 0 0 chr3R 7579393 7579442 -20325611 + (TCG)n Simple_repeat Simple_repeat 3 51 0 4 642 206 227 0 0 chr3R 7579635 7579679 -20325374 + (CTG)n Simple_repeat Simple_repeat 1 44 0 4 642 21 0 0 0 chr3R 7585007 7585028 -20320025 + AT_rich Low_complexity Low_complexity 1 21 0 4 642 238 184 0 62 chr3R 7585245 7585326 -20319727 - ROO_I LTR Pao -7539 717 642 4 642 180 97 0 0 chr3R 7589621 7589652 -20315401 + (TC)n Simple_repeat Simple_repeat 1 31 0 4 642 224 222 0 0 chr3R 7589889 7589943 -20315110 + (TTG)n Simple_repeat Simple_repeat 3 56 0 4 642 25 0 0 0 chr3R 7590470 7590495 -20314558 + AT_rich Low_complexity Low_complexity 1 25 0 4 642 22 0 0 0 chr3R 7590665 7590687 -20314366 + AT_rich Low_complexity Low_complexity 1 22 0 4 642 23 0 0 0 chr3R 7591174 7591197 -20313856 + AT_rich Low_complexity Low_complexity 1 23 0 4 642 189 0 0 0 chr3R 7591331 7591352 -20313701 + (CAATT)n Simple_repeat Simple_repeat 5 25 0 4 642 293 82 0 20 chr3R 7592093 7592143 -20312910 + (TTTTC)n Simple_repeat Simple_repeat 2 50 0 4 642 180 97 0 0 chr3R 7592303 7592334 -20312719 + (GA)n Simple_repeat Simple_repeat 2 32 0 4 642 31 58 0 0 chr3R 7594941 7594993 -20310060 + AT_rich Low_complexity Low_complexity 1 52 0 4 642 24 32 0 0 chr3R 7597704 7597735 -20307318 + AT_rich Low_complexity Low_complexity 1 31 0 4 642 39 22 0 0 chr3R 7598925 7598971 -20306082 + AT_rich Low_complexity Low_complexity 1 46 0 4 642 223 250 16 0 chr3R 7601770 7601834 -20303219 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 643 22 0 0 0 chr3R 7603052 7603074 -20301979 + AT_rich Low_complexity Low_complexity 1 22 0 4 643 180 176 0 0 chr3R 7603600 7603634 -20301419 + (TGG)n Simple_repeat Simple_repeat 2 35 0 4 643 24 0 0 0 chr3R 7604460 7604484 -20300569 + AT_rich Low_complexity Low_complexity 1 24 0 4 643 195 129 0 0 chr3R 7605914 7605945 -20299108 + (CATA)n Simple_repeat Simple_repeat 3 33 0 4 643 208 235 0 38 chr3R 7606566 7606619 -20298434 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 4 643 21 36 0 0 chr3R 7612614 7612642 -20292411 + AT_rich Low_complexity Low_complexity 1 28 0 4 643 25 31 0 0 chr3R 7614325 7614357 -20290696 + AT_rich Low_complexity Low_complexity 1 32 0 4 643 24 32 0 0 chr3R 7615235 7615266 -20289787 + AT_rich Low_complexity Low_complexity 1 31 0 4 643 22 56 0 0 chr3R 7619379 7619415 -20285638 + AT_rich Low_complexity Low_complexity 1 36 0 4 643 26 0 0 0 chr3R 7628763 7628789 -20276264 + AT_rich Low_complexity Low_complexity 1 26 0 4 643 22 35 0 0 chr3R 7629199 7629228 -20275825 + AT_rich Low_complexity Low_complexity 1 29 0 4 643 24 0 0 0 chr3R 7630759 7630783 -20274270 + AT_rich Low_complexity Low_complexity 1 24 0 4 643 248 53 132 0 chr3R 7633105 7633143 -20271910 + DNAREP1_DM LINE Penelope 1 43 -551 4 643 24 0 0 0 chr3R 7633241 7633265 -20271788 + AT_rich Low_complexity Low_complexity 1 24 0 4 643 1101 152 180 38 chr3R 7633267 7633506 -20271547 + DNAREP1_DM LINE Penelope 322 594 0 4 643 26 64 0 0 chr3R 7635101 7635148 -20269905 + AT_rich Low_complexity Low_complexity 1 47 0 4 643 233 194 13 141 chr3R 7636516 7636594 -20268459 - ROO_I LTR Pao -7551 705 638 4 643 23 92 0 0 chr3R 7640928 7640993 -20264060 + AT_rich Low_complexity Low_complexity 1 65 0 4 643 246 250 0 0 chr3R 7648696 7648756 -20256297 + (TA)n Simple_repeat Simple_repeat 2 61 0 4 643 207 204 0 0 chr3R 7653448 7653497 -20251556 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 643 198 103 0 0 chr3R 7655083 7655112 -20249941 + (CACTC)n Simple_repeat Simple_repeat 4 32 0 4 643 200 212 0 15 chr3R 7656418 7656485 -20248568 + (CAA)n Simple_repeat Simple_repeat 1 66 0 4 643 455 21 106 11 chr3R 7656745 7656839 -20248214 + (TATAG)n Simple_repeat Simple_repeat 2 104 0 4 643 26 93 0 0 chr3R 7656841 7656916 -20248137 + AT_rich Low_complexity Low_complexity 1 75 0 4 643 21 0 0 0 chr3R 7664835 7664856 -20240197 + AT_rich Low_complexity Low_complexity 1 21 0 4 643 200 232 0 18 chr3R 7666642 7666699 -20238354 + (CAA)n Simple_repeat Simple_repeat 3 58 0 4 643 47263 6 0 1 chr3R 7666844 7671970 -20233083 - BS LINE Jockey 0 5126 5 4 643 29 0 0 0 chr3R 7673315 7673344 -20231709 + AT_rich Low_complexity Low_complexity 1 29 0 4 643 25 0 0 0 chr3R 7674642 7674667 -20230386 + AT_rich Low_complexity Low_complexity 1 25 0 4 643 22 0 0 0 chr3R 7674862 7674884 -20230169 + AT_rich Low_complexity Low_complexity 1 22 0 4 643 25 31 0 0 chr3R 7677892 7677924 -20227129 + AT_rich Low_complexity Low_complexity 1 32 0 4 643 23 54 0 0 chr3R 7681849 7681886 -20223167 + AT_rich Low_complexity Low_complexity 1 37 0 4 643 34 65 0 0 chr3R 7682901 7682963 -20222090 + AT_rich Low_complexity Low_complexity 1 62 0 4 643 26 0 0 0 chr3R 7683839 7683865 -20221188 + AT_rich Low_complexity Low_complexity 1 26 0 4 643 22 35 0 0 chr3R 7684107 7684136 -20220917 + AT_rich Low_complexity Low_complexity 1 29 0 4 643 31 0 0 0 chr3R 7687346 7687377 -20217676 + AT_rich Low_complexity Low_complexity 1 31 0 4 643 23 54 0 0 chr3R 7690438 7690475 -20214578 + AT_rich Low_complexity Low_complexity 1 37 0 4 643 30 45 0 0 chr3R 7693929 7693973 -20211080 + AT_rich Low_complexity Low_complexity 1 44 0 4 643 192 40 0 0 chr3R 7694773 7694798 -20210255 + (TTG)n Simple_repeat Simple_repeat 1 25 0 4 643 22 56 0 0 chr3R 7695561 7695597 -20209456 + AT_rich Low_complexity Low_complexity 1 36 0 4 643 207 100 0 0 chr3R 7695978 7696008 -20209045 + (TATATG)n Simple_repeat Simple_repeat 4 33 0 4 643 263 329 0 0 chr3R 7696016 7696092 -20208961 + (CTG)n Simple_repeat Simple_repeat 2 77 0 4 643 186 43 0 0 chr3R 7697878 7697901 -20207152 + (AACTG)n Simple_repeat Simple_repeat 4 26 0 4 643 22 35 0 0 chr3R 7698542 7698571 -20206482 + AT_rich Low_complexity Low_complexity 1 29 0 4 643 26 0 0 0 chr3R 7699001 7699027 -20206026 + AT_rich Low_complexity Low_complexity 1 26 0 4 643 189 0 0 0 chr3R 7700201 7700222 -20204831 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 643 28 0 0 0 chr3R 7701455 7701483 -20203570 + AT_rich Low_complexity Low_complexity 1 28 0 4 643 22 0 0 0 chr3R 7701633 7701655 -20203398 + AT_rich Low_complexity Low_complexity 1 22 0 4 643 219 69 0 0 chr3R 7702732 7702761 -20202292 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 643 21 36 0 0 chr3R 7708314 7708342 -20196711 + AT_rich Low_complexity Low_complexity 1 28 0 4 643 22 0 0 0 chr3R 7708376 7708398 -20196655 + AT_rich Low_complexity Low_complexity 1 22 0 4 643 30 0 0 0 chr3R 7718960 7718990 -20186063 + AT_rich Low_complexity Low_complexity 1 30 0 4 643 189 0 0 0 chr3R 7724076 7724097 -20180956 + (TA)n Simple_repeat Simple_repeat 2 22 0 4 643 25 83 0 0 chr3R 7729431 7729491 -20175562 + AT_rich Low_complexity Low_complexity 1 60 0 4 643 312 94 0 0 chr3R 7732223 7732276 -20172777 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 643 23 78 0 0 chr3R 7732626 7732677 -20172376 + AT_rich Low_complexity Low_complexity 1 51 0 4 643 183 100 0 0 chr3R 7732925 7732955 -20172098 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 644 202 135 27 0 chr3R 7735255 7735292 -20169761 + (GGTTG)n Simple_repeat Simple_repeat 5 42 0 4 644 21 0 0 0 chr3R 7741235 7741256 -20163797 + AT_rich Low_complexity Low_complexity 1 21 0 4 644 24 32 0 0 chr3R 7742524 7742555 -20162498 + AT_rich Low_complexity Low_complexity 1 31 0 4 644 195 42 0 0 chr3R 7746305 7746329 -20158724 + (AGGGGG)n Simple_repeat Simple_repeat 6 29 0 4 644 21 71 0 0 chr3R 7748118 7748160 -20156893 + AT_rich Low_complexity Low_complexity 1 42 0 4 644 222 91 0 0 chr3R 7748263 7748296 -20156757 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 644 23 33 0 0 chr3R 7748621 7748651 -20156402 + AT_rich Low_complexity Low_complexity 1 30 0 4 644 24 0 0 0 chr3R 7750046 7750070 -20154983 + AT_rich Low_complexity Low_complexity 1 24 0 4 644 341 190 0 0 chr3R 7751517 7751575 -20153478 + (TCTCTG)n Simple_repeat Simple_repeat 5 62 0 4 644 30 59 0 0 chr3R 7753531 7753582 -20151471 + AT_rich Low_complexity Low_complexity 1 51 0 4 644 34 24 0 0 chr3R 7759571 7759612 -20145441 + AT_rich Low_complexity Low_complexity 1 41 0 4 644 209 217 32 32 chr3R 7761343 7761405 -20143648 + (CAGAGA)n Simple_repeat Simple_repeat 1 62 0 4 644 21 82 0 0 chr3R 7762935 7762984 -20142069 + AT_rich Low_complexity Low_complexity 1 49 0 4 644 192 135 0 0 chr3R 7764968 7765005 -20140048 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 644 234 0 0 0 chr3R 7767115 7767141 -20137912 + (T)n Simple_repeat Simple_repeat 1 26 0 4 644 27 0 0 0 chr3R 7769133 7769160 -20135893 + AT_rich Low_complexity Low_complexity 1 27 0 4 644 23 54 0 0 chr3R 7770465 7770502 -20134551 + AT_rich Low_complexity Low_complexity 1 37 0 4 644 24 32 0 0 chr3R 7771417 7771448 -20133605 + AT_rich Low_complexity Low_complexity 1 31 0 4 644 236 192 95 14 chr3R 7772224 7772298 -20132755 + DNAREP1_DM LINE Penelope 22 101 -493 4 644 23 0 0 0 chr3R 7773812 7773835 -20131218 + AT_rich Low_complexity Low_complexity 1 23 0 4 644 180 77 0 0 chr3R 7774031 7774057 -20130996 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 4 644 21 0 0 0 chr3R 7775080 7775101 -20129952 + AT_rich Low_complexity Low_complexity 1 21 0 4 644 183 42 0 0 chr3R 7776296 7776320 -20128733 + (CAG)n Simple_repeat Simple_repeat 3 26 0 4 644 206 136 23 0 chr3R 7777850 7777894 -20127159 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 644 204 286 0 0 chr3R 7779133 7779182 -20125871 + (CAG)n Simple_repeat Simple_repeat 2 50 0 4 644 24 32 0 0 chr3R 7779878 7779909 -20125144 + AT_rich Low_complexity Low_complexity 1 31 0 4 644 1088 97 56 0 chr3R 7782763 7782959 -20122094 - S_DM DNA Tc1 -4 1732 1526 4 644 206 244 0 0 chr3R 7783134 7783175 -20121878 + (CATATA)n Simple_repeat Simple_repeat 5 45 0 4 644 284 188 14 0 chr3R 7783333 7783402 -20121651 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 644 183 80 0 0 chr3R 7783472 7783497 -20121556 + (CATA)n Simple_repeat Simple_repeat 4 28 0 4 644 1685 52 0 0 chr3R 7783627 7783857 -20121196 + S_DM DNA Tc1 1507 1736 0 4 644 23 33 0 0 chr3R 7786612 7786642 -20118411 + AT_rich Low_complexity Low_complexity 1 30 0 4 644 21 0 0 0 chr3R 7793318 7793339 -20111714 + AT_rich Low_complexity Low_complexity 1 21 0 4 644 21 89 0 0 chr3R 7794804 7794860 -20110193 + AT_rich Low_complexity Low_complexity 1 56 0 4 644 32 0 0 0 chr3R 7803247 7803279 -20101774 + AT_rich Low_complexity Low_complexity 1 32 0 4 644 24 0 0 0 chr3R 7803959 7803983 -20101070 + AT_rich Low_complexity Low_complexity 1 24 0 4 644 186 43 0 0 chr3R 7804706 7804729 -20100324 + (CA)n Simple_repeat Simple_repeat 1 23 0 4 644 26 0 0 0 chr3R 7808189 7808215 -20096838 + AT_rich Low_complexity Low_complexity 1 26 0 4 644 180 0 0 0 chr3R 7813744 7813764 -20091289 + (CATA)n Simple_repeat Simple_repeat 1 20 0 4 644 246 32 0 0 chr3R 7815337 7815368 -20089685 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 644 22 0 0 0 chr3R 7818151 7818173 -20086880 + AT_rich Low_complexity Low_complexity 1 22 0 4 644 198 143 0 0 chr3R 7819186 7819221 -20085832 + (TATG)n Simple_repeat Simple_repeat 2 36 0 4 644 22 56 0 0 chr3R 7819903 7819939 -20085114 + AT_rich Low_complexity Low_complexity 1 36 0 4 644 25 31 0 0 chr3R 7820016 7820048 -20085005 + AT_rich Low_complexity Low_complexity 1 32 0 4 644 21 36 0 0 chr3R 7820556 7820584 -20084469 + AT_rich Low_complexity Low_complexity 1 28 0 4 644 25 31 0 0 chr3R 7822870 7822902 -20082151 + AT_rich Low_complexity Low_complexity 1 32 0 4 644 201 162 0 0 chr3R 7823991 7824028 -20081025 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 644 22 35 0 0 chr3R 7824510 7824539 -20080514 + AT_rich Low_complexity Low_complexity 1 29 0 4 644 29 28 0 0 chr3R 7827954 7827990 -20077063 + AT_rich Low_complexity Low_complexity 1 36 0 4 644 279 104 0 0 chr3R 7831302 7831350 -20073703 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 644 22 35 0 0 chr3R 7833319 7833348 -20071705 + AT_rich Low_complexity Low_complexity 1 29 0 4 644 29 28 0 0 chr3R 7833708 7833744 -20071309 + AT_rich Low_complexity Low_complexity 1 36 0 4 644 218 42 61 20 chr3R 7842765 7842814 -20062239 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 644 21 36 0 0 chr3R 7844228 7844256 -20060797 + AT_rich Low_complexity Low_complexity 1 28 0 4 644 28 79 0 0 chr3R 7846583 7846646 -20058407 + AT_rich Low_complexity Low_complexity 1 63 0 4 644 19492 1 1 1 chr3R 7848659 7850781 -20054272 - POGO DNA Pogo 0 2121 1 4 644 183 42 0 0 chr3R 7852138 7852162 -20052891 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 644 183 80 0 0 chr3R 7852667 7852692 -20052361 + (CGAAT)n Simple_repeat Simple_repeat 3 27 0 4 644 22 0 0 0 chr3R 7852863 7852885 -20052168 + AT_rich Low_complexity Low_complexity 1 22 0 4 644 206 98 0 47 chr3R 7852931 7852974 -20052079 + (CAAA)n Simple_repeat Simple_repeat 3 43 0 4 644 26 30 0 0 chr3R 7853122 7853155 -20051898 + AT_rich Low_complexity Low_complexity 1 33 0 4 644 25 75 0 0 chr3R 7853798 7853851 -20051202 + AT_rich Low_complexity Low_complexity 1 53 0 4 644 21 36 0 0 chr3R 7854888 7854916 -20050137 + AT_rich Low_complexity Low_complexity 1 28 0 4 644 24 67 0 0 chr3R 7858910 7858955 -20046098 + AT_rich Low_complexity Low_complexity 1 45 0 4 644 22 35 0 0 chr3R 7863072 7863101 -20041952 + AT_rich Low_complexity Low_complexity 1 29 0 4 645 264 30 0 0 chr3R 7869788 7869821 -20035232 + (CTG)n Simple_repeat Simple_repeat 2 34 0 4 645 25 75 0 0 chr3R 7871045 7871098 -20033955 + AT_rich Low_complexity Low_complexity 1 53 0 4 645 24 32 0 0 chr3R 7872646 7872677 -20032376 + AT_rich Low_complexity Low_complexity 1 31 0 4 645 278 129 16 0 chr3R 7878147 7878209 -20026844 + (CCCA)n Simple_repeat Simple_repeat 4 66 0 4 645 311 0 0 25 chr3R 7883919 7883959 -20021094 + (CATA)n Simple_repeat Simple_repeat 4 42 0 4 645 21 0 0 0 chr3R 7885400 7885421 -20019632 + AT_rich Low_complexity Low_complexity 1 21 0 4 645 21 0 0 0 chr3R 7886790 7886811 -20018242 + AT_rich Low_complexity Low_complexity 1 21 0 4 645 220 250 0 0 chr3R 7891069 7891133 -20013920 + (TG)n Simple_repeat Simple_repeat 2 65 0 4 645 29 28 0 0 chr3R 7898994 7899030 -20006023 + AT_rich Low_complexity Low_complexity 1 36 0 4 645 30 0 0 0 chr3R 7899666 7899696 -20005357 + AT_rich Low_complexity Low_complexity 1 30 0 4 645 210 71 0 0 chr3R 7900640 7900668 -20004385 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 4 645 28 0 0 0 chr3R 7904913 7904941 -20000112 + AT_rich Low_complexity Low_complexity 1 28 0 4 645 204 40 0 0 chr3R 7905359 7905384 -19999669 + (TCC)n Simple_repeat Simple_repeat 1 25 0 4 645 44 91 0 0 chr3R 7906183 7906304 -19998749 + AT_rich Low_complexity Low_complexity 1 121 0 4 645 223 288 0 0 chr3R 7907471 7907537 -19997516 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 645 31 68 0 0 chr3R 7910323 7910382 -19994671 + AT_rich Low_complexity Low_complexity 1 59 0 4 645 23 0 0 0 chr3R 7913936 7913959 -19991094 + AT_rich Low_complexity Low_complexity 1 23 0 4 645 23 54 0 0 chr3R 7918716 7918753 -19986300 + AT_rich Low_complexity Low_complexity 1 37 0 4 645 22 0 0 0 chr3R 7920053 7920075 -19984978 + AT_rich Low_complexity Low_complexity 1 22 0 4 645 267 79 0 0 chr3R 7922123 7922161 -19982892 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 4 645 21 0 0 0 chr3R 7923448 7923469 -19981584 + AT_rich Low_complexity Low_complexity 1 21 0 4 645 22 0 0 0 chr3R 7927362 7927384 -19977669 + AT_rich Low_complexity Low_complexity 1 22 0 4 645 27 0 0 0 chr3R 7928256 7928283 -19976770 + AT_rich Low_complexity Low_complexity 1 27 0 4 645 21 36 0 0 chr3R 7929493 7929521 -19975532 + AT_rich Low_complexity Low_complexity 1 28 0 4 645 201 196 0 0 chr3R 7930864 7930915 -19974138 + T-rich Low_complexity Low_complexity 1 51 0 4 645 22 35 0 0 chr3R 7932673 7932702 -19972351 + AT_rich Low_complexity Low_complexity 1 29 0 4 645 333 246 0 32 chr3R 7933241 7933367 -19971686 + ROO_I LTR Pao 641 762 -7494 4 645 195 114 0 0 chr3R 7934676 7934711 -19970342 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 4 645 198 71 0 0 chr3R 7934835 7934863 -19970190 + (TA)n Simple_repeat Simple_repeat 1 28 0 4 645 201 121 0 0 chr3R 7936441 7936474 -19968579 + (CCTAT)n Simple_repeat Simple_repeat 1 33 0 4 645 21 0 0 0 chr3R 7937730 7937751 -19967302 + AT_rich Low_complexity Low_complexity 1 21 0 4 645 261 0 0 0 chr3R 7942548 7942577 -19962476 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 645 24 32 0 0 chr3R 7943074 7943105 -19961948 + AT_rich Low_complexity Low_complexity 1 31 0 4 645 249 33 0 0 chr3R 7944591 7944621 -19960432 + (TA)n Simple_repeat Simple_repeat 2 31 0 4 645 22 0 0 0 chr3R 7946518 7946540 -19958513 + AT_rich Low_complexity Low_complexity 1 22 0 4 645 22 35 0 0 chr3R 7947236 7947265 -19957788 + AT_rich Low_complexity Low_complexity 1 29 0 4 645 25 0 0 0 chr3R 7947384 7947409 -19957644 + AT_rich Low_complexity Low_complexity 1 25 0 4 645 23 0 0 0 chr3R 7947428 7947451 -19957602 + AT_rich Low_complexity Low_complexity 1 23 0 4 645 25 31 0 0 chr3R 7947702 7947734 -19957319 + AT_rich Low_complexity Low_complexity 1 32 0 4 645 189 0 0 0 chr3R 7948185 7948206 -19956847 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 645 204 40 0 0 chr3R 7948886 7948911 -19956142 + (CGAAA)n Simple_repeat Simple_repeat 3 27 0 4 645 213 39 0 0 chr3R 7951334 7951360 -19953693 + (ATG)n Simple_repeat Simple_repeat 3 28 0 4 645 234 62 0 0 chr3R 7952307 7952339 -19952714 + (A)n Simple_repeat Simple_repeat 1 32 0 4 645 25 51 0 0 chr3R 7953238 7953277 -19951776 + AT_rich Low_complexity Low_complexity 1 39 0 4 645 31 26 0 0 chr3R 7954153 7954191 -19950862 + AT_rich Low_complexity Low_complexity 1 38 0 4 645 23 0 0 0 chr3R 7956578 7956601 -19948452 + AT_rich Low_complexity Low_complexity 1 23 0 4 645 26 0 0 0 chr3R 7958856 7958882 -19946171 + AT_rich Low_complexity Low_complexity 1 26 0 4 645 26 0 0 0 chr3R 7959904 7959930 -19945123 + AT_rich Low_complexity Low_complexity 1 26 0 4 645 22 56 0 0 chr3R 7960129 7960165 -19944888 + AT_rich Low_complexity Low_complexity 1 36 0 4 645 214 120 0 74 chr3R 7964627 7964681 -19940372 + (CATTT)n Simple_repeat Simple_repeat 1 50 0 4 645 21 57 0 0 chr3R 7966778 7966813 -19938240 + AT_rich Low_complexity Low_complexity 1 35 0 4 645 210 174 0 0 chr3R 7967228 7967274 -19937779 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 645 21 0 0 0 chr3R 7968098 7968119 -19936934 + AT_rich Low_complexity Low_complexity 1 21 0 4 645 21 0 0 0 chr3R 7969716 7969737 -19935316 + AT_rich Low_complexity Low_complexity 1 21 0 4 645 234 169 0 0 chr3R 7970294 7970359 -19934694 + (TGG)n Simple_repeat Simple_repeat 3 67 0 4 645 211 174 0 42 chr3R 7976765 7976813 -19928240 + (TCTCTG)n Simple_repeat Simple_repeat 2 47 0 4 645 192 186 0 0 chr3R 7978080 7978139 -19926914 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 645 204 139 28 0 chr3R 7979585 7979621 -19925432 + (CAA)n Simple_repeat Simple_repeat 1 37 0 4 645 255 61 0 0 chr3R 7983244 7983277 -19921776 + (GCTG)n Simple_repeat Simple_repeat 1 33 0 4 645 249 265 29 0 chr3R 7985274 7985342 -19919711 + (CCCCAG)n Simple_repeat Simple_repeat 1 70 0 4 645 202 329 0 0 chr3R 7990673 7990758 -19914295 + (CAG)n Simple_repeat Simple_repeat 3 87 0 4 645 24 32 0 0 chr3R 7994216 7994247 -19910806 + AT_rich Low_complexity Low_complexity 1 31 0 4 646 243 0 0 0 chr3R 8000560 8000587 -19904466 + (A)n Simple_repeat Simple_repeat 1 27 0 4 646 29 28 0 0 chr3R 8001248 8001284 -19903769 + AT_rich Low_complexity Low_complexity 1 36 0 4 646 21 0 0 0 chr3R 8006934 8006955 -19898098 + AT_rich Low_complexity Low_complexity 1 21 0 4 646 192 40 0 0 chr3R 8007151 8007176 -19897877 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 646 25 31 0 0 chr3R 8007959 8007991 -19897062 + AT_rich Low_complexity Low_complexity 1 32 0 4 646 216 0 0 0 chr3R 8010356 8010380 -19894673 + (CGAGG)n Simple_repeat Simple_repeat 5 28 0 4 646 21 36 0 0 chr3R 8010601 8010629 -19894424 + AT_rich Low_complexity Low_complexity 1 28 0 4 646 27 62 0 0 chr3R 8014003 8014051 -19891002 + AT_rich Low_complexity Low_complexity 1 48 0 4 646 219 125 0 0 chr3R 8022482 8022522 -19882531 + (CAA)n Simple_repeat Simple_repeat 2 41 0 4 646 27 29 0 0 chr3R 8030403 8030437 -19874616 + AT_rich Low_complexity Low_complexity 1 34 0 4 646 23 0 0 0 chr3R 8030570 8030593 -19874460 + AT_rich Low_complexity Low_complexity 1 23 0 4 646 279 54 0 0 chr3R 8030983 8031020 -19874033 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 646 25 31 0 0 chr3R 8037229 8037261 -19867792 + AT_rich Low_complexity Low_complexity 1 32 0 4 646 641 107 181 90 chr3R 8038021 8038165 -19866888 - DNAREP1_DM LINE Penelope 0 594 438 4 646 1252 111 48 0 chr3R 8038164 8038353 -19866700 - DNAREP1_DM LINE Penelope -396 198 1 4 646 23 33 0 0 chr3R 8039410 8039440 -19865613 + AT_rich Low_complexity Low_complexity 1 30 0 4 646 186 171 0 0 chr3R 8040547 8040588 -19864465 + (TGG)n Simple_repeat Simple_repeat 2 42 0 4 646 195 139 0 0 chr3R 8041154 8041190 -19863863 + (CGG)n Simple_repeat Simple_repeat 2 37 0 4 646 25 51 0 0 chr3R 8049089 8049128 -19855925 + AT_rich Low_complexity Low_complexity 1 39 0 4 646 23 0 0 0 chr3R 8062868 8062891 -19842162 + AT_rich Low_complexity Low_complexity 1 23 0 4 646 195 192 0 40 chr3R 8067508 8067584 -19837469 + (CCCGAA)n Simple_repeat Simple_repeat 2 74 0 4 646 33 0 0 0 chr3R 8069986 8070019 -19835034 + AT_rich Low_complexity Low_complexity 1 33 0 4 646 201 94 0 0 chr3R 8085599 8085631 -19819422 + (TGGA)n Simple_repeat Simple_repeat 4 35 0 4 646 222 204 0 0 chr3R 8089318 8089362 -19815691 + (CAT)n Simple_repeat Simple_repeat 1 44 0 4 646 212 200 0 62 chr3R 8090147 8090211 -19814842 + GA-rich Low_complexity Low_complexity 2 61 0 4 646 225 213 0 21 chr3R 8091038 8091086 -19813967 + A-rich Low_complexity Low_complexity 4 50 0 4 646 27 49 0 0 chr3R 8100784 8100825 -19804228 + AT_rich Low_complexity Low_complexity 1 41 0 4 646 21 36 0 0 chr3R 8101339 8101367 -19803686 + AT_rich Low_complexity Low_complexity 1 28 0 4 646 36 0 0 0 chr3R 8105984 8106020 -19799033 + AT_rich Low_complexity Low_complexity 1 36 0 4 646 228 200 0 35 chr3R 8106575 8106632 -19798421 + (TGG)n Simple_repeat Simple_repeat 3 57 0 4 646 183 80 0 0 chr3R 8106812 8106837 -19798216 + (TCGGG)n Simple_repeat Simple_repeat 3 27 0 4 646 21 0 0 0 chr3R 8107091 8107112 -19797941 + AT_rich Low_complexity Low_complexity 1 21 0 4 646 195 42 0 0 chr3R 8108781 8108805 -19796248 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 646 215 289 0 13 chr3R 8109789 8109866 -19795187 + (TCTG)n Simple_repeat Simple_repeat 3 78 0 4 646 216 67 0 0 chr3R 8112823 8112853 -19792200 + (GCTG)n Simple_repeat Simple_repeat 3 32 0 4 646 255 61 0 0 chr3R 8114102 8114135 -19790918 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 646 291 130 0 0 chr3R 8116743 8116797 -19788256 + (ACTG)n Simple_repeat Simple_repeat 1 54 0 4 646 21 0 0 0 chr3R 8122477 8122498 -19782555 + AT_rich Low_complexity Low_complexity 1 21 0 4 646 233 232 36 0 chr3R 8123630 8123686 -19781367 + (CCCCAG)n Simple_repeat Simple_repeat 1 58 0 4 647 252 222 0 0 chr3R 8126800 8126872 -19778181 + (CGG)n Simple_repeat Simple_repeat 1 72 0 4 647 229 248 26 34 chr3R 8126953 8127070 -19777983 + ROO_I LTR Pao 641 756 -7500 4 647 338 107 18 0 chr3R 8127327 8127383 -19777670 + (CAG)n Simple_repeat Simple_repeat 3 59 0 4 647 291 215 17 78 chr3R 8127431 8127547 -19777506 + ROO_I LTR Pao 640 748 -7508 4 647 203 185 18 36 chr3R 8128058 8128114 -19776939 + (TA)n Simple_repeat Simple_repeat 1 55 0 4 647 26 50 0 0 chr3R 8128207 8128247 -19776806 + AT_rich Low_complexity Low_complexity 1 40 0 4 647 25 65 0 0 chr3R 8128979 8129025 -19776028 + AT_rich Low_complexity Low_complexity 1 46 0 4 647 26 0 0 0 chr3R 8130728 8130754 -19774299 + AT_rich Low_complexity Low_complexity 1 26 0 4 647 24 0 0 0 chr3R 8136075 8136099 -19768954 + AT_rich Low_complexity Low_complexity 1 24 0 4 647 24 0 0 0 chr3R 8136432 8136456 -19768597 + AT_rich Low_complexity Low_complexity 1 24 0 4 647 180 77 0 0 chr3R 8138885 8138911 -19766142 + (TTTTA)n Simple_repeat Simple_repeat 4 29 0 4 647 217 259 0 0 chr3R 8139640 8139694 -19765359 + T-rich Low_complexity Low_complexity 1 54 0 4 647 23 0 0 0 chr3R 8140201 8140224 -19764829 + AT_rich Low_complexity Low_complexity 1 23 0 4 647 216 182 0 0 chr3R 8146225 8146269 -19758784 + (TGAA)n Simple_repeat Simple_repeat 4 47 0 4 647 21 82 0 0 chr3R 8147291 8147340 -19757713 + AT_rich Low_complexity Low_complexity 1 49 0 4 647 225 0 0 0 chr3R 8152062 8152087 -19752966 + (TAAG)n Simple_repeat Simple_repeat 2 26 0 4 647 23 0 0 0 chr3R 8154319 8154342 -19750711 + AT_rich Low_complexity Low_complexity 1 23 0 4 647 226 219 0 0 chr3R 8155785 8155826 -19749227 + (CCCGAA)n Simple_repeat Simple_repeat 5 45 0 4 647 288 0 0 0 chr3R 8160681 8160713 -19744340 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 647 23 33 0 0 chr3R 8165008 8165038 -19740015 + AT_rich Low_complexity Low_complexity 1 30 0 4 647 498 91 0 54 chr3R 8167145 8167238 -19737815 - DNAREP1_DM LINE Penelope -443 151 64 4 647 22 56 0 0 chr3R 8167922 8167958 -19737095 + AT_rich Low_complexity Low_complexity 1 36 0 4 647 24 77 0 0 chr3R 8168501 8168553 -19736500 + AT_rich Low_complexity Low_complexity 1 52 0 4 647 37 23 0 0 chr3R 8176484 8176528 -19728525 + AT_rich Low_complexity Low_complexity 1 44 0 4 647 22 0 0 0 chr3R 8179863 8179885 -19725168 + AT_rich Low_complexity Low_complexity 1 22 0 4 647 29 28 0 0 chr3R 8182087 8182123 -19722930 + AT_rich Low_complexity Low_complexity 1 36 0 4 647 21 0 0 0 chr3R 8183924 8183945 -19721108 + AT_rich Low_complexity Low_complexity 1 21 0 4 647 201 39 0 0 chr3R 8187795 8187821 -19717232 + (T)n Simple_repeat Simple_repeat 1 26 0 4 647 23 78 0 0 chr3R 8188907 8188958 -19716095 + AT_rich Low_complexity Low_complexity 1 51 0 4 647 533 106 255 0 chr3R 8189295 8189389 -19715664 + DNAREP1_DM LINE Penelope 3 120 -474 4 647 209 182 0 0 chr3R 8195716 8195749 -19709304 + (TATG)n Simple_repeat Simple_repeat 3 35 0 4 647 32 26 0 0 chr3R 8196849 8196888 -19708165 + AT_rich Low_complexity Low_complexity 1 39 0 4 647 25 31 0 0 chr3R 8197138 8197170 -19707883 + AT_rich Low_complexity Low_complexity 1 32 0 4 647 430 85 34 0 chr3R 8197170 8197229 -19707824 + DNAREP1_DM LINE Penelope 33 93 -501 4 647 29 28 0 0 chr3R 8199464 8199500 -19705553 + AT_rich Low_complexity Low_complexity 1 36 0 4 647 23 54 0 0 chr3R 8201101 8201138 -19703915 + AT_rich Low_complexity Low_complexity 1 37 0 4 647 23 54 0 0 chr3R 8201211 8201248 -19703805 + AT_rich Low_complexity Low_complexity 1 37 0 4 647 21 0 0 0 chr3R 8202181 8202202 -19702851 + AT_rich Low_complexity Low_complexity 1 21 0 4 647 30 27 0 0 chr3R 8203615 8203652 -19701401 + AT_rich Low_complexity Low_complexity 1 37 0 4 647 31 44 0 0 chr3R 8206685 8206730 -19698323 + AT_rich Low_complexity Low_complexity 1 45 0 4 647 22 0 0 0 chr3R 8209627 8209649 -19695404 + AT_rich Low_complexity Low_complexity 1 22 0 4 647 21 0 0 0 chr3R 8209749 8209770 -19695283 + AT_rich Low_complexity Low_complexity 1 21 0 4 647 21 0 0 0 chr3R 8210896 8210917 -19694136 + AT_rich Low_complexity Low_complexity 1 21 0 4 647 23 0 0 0 chr3R 8211285 8211308 -19693745 + AT_rich Low_complexity Low_complexity 1 23 0 4 647 26 74 0 0 chr3R 8213206 8213260 -19691793 + AT_rich Low_complexity Low_complexity 1 54 0 4 647 26 0 0 0 chr3R 8215015 8215041 -19690012 + AT_rich Low_complexity Low_complexity 1 26 0 4 647 21 0 0 0 chr3R 8221944 8221965 -19683088 + AT_rich Low_complexity Low_complexity 1 21 0 4 647 28 29 0 0 chr3R 8228643 8228678 -19676375 + AT_rich Low_complexity Low_complexity 1 35 0 4 647 21 0 0 0 chr3R 8228887 8228908 -19676145 + AT_rich Low_complexity Low_complexity 1 21 0 4 647 22 35 0 0 chr3R 8237454 8237483 -19667570 + AT_rich Low_complexity Low_complexity 1 29 0 4 647 34 24 0 0 chr3R 8239319 8239360 -19665693 + AT_rich Low_complexity Low_complexity 1 41 0 4 647 201 39 0 0 chr3R 8242906 8242932 -19662121 + (T)n Simple_repeat Simple_repeat 1 26 0 4 647 203 176 0 0 chr3R 8246585 8246619 -19658434 + (CCA)n Simple_repeat Simple_repeat 2 35 0 4 647 234 0 0 0 chr3R 8248991 8249017 -19656036 + (CAG)n Simple_repeat Simple_repeat 2 27 0 4 647 21 36 0 0 chr3R 8249434 8249462 -19655591 + AT_rich Low_complexity Low_complexity 1 28 0 4 647 180 0 0 0 chr3R 8249567 8249587 -19655466 + (GCTG)n Simple_repeat Simple_repeat 4 23 0 4 647 186 43 0 0 chr3R 8250002 8250025 -19655028 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 648 25 0 0 0 chr3R 8259644 8259669 -19645384 + AT_rich Low_complexity Low_complexity 1 25 0 4 648 209 54 81 0 chr3R 8259669 8259706 -19645347 + (CTATA)n Simple_repeat Simple_repeat 1 40 0 4 648 21 36 0 0 chr3R 8262881 8262909 -19642144 + AT_rich Low_complexity Low_complexity 1 28 0 4 648 21 0 0 0 chr3R 8274898 8274919 -19630134 + AT_rich Low_complexity Low_complexity 1 21 0 4 648 23 0 0 0 chr3R 8277132 8277155 -19627898 + AT_rich Low_complexity Low_complexity 1 23 0 4 648 26 30 0 0 chr3R 8293933 8293966 -19611087 + AT_rich Low_complexity Low_complexity 1 33 0 4 648 228 158 34 34 chr3R 8294008 8294067 -19610986 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 4 648 1809 0 0 0 chr3R 8294199 8294397 -19610656 - Copia2_LTR_DM LTR Copia 0 198 1 4 648 5769 13 0 0 chr3R 8294397 8295034 -19610019 - Copia2_I LTR Copia 0 4162 3526 4 648 1565 0 0 0 chr3R 8295388 8295558 -19609495 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3858 2 7 0 chr3R 8295558 8295978 -19609075 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8295978 8296010 -19609043 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5722 11 5 0 chr3R 8296010 8296644 -19608409 - Copia2_I LTR Copia 0 4162 3526 4 648 9452 22 2 4 chr3R 8296794 8297901 -19607152 - PROTOP_A DNA P 0 1105 1 4 648 589 0 0 0 chr3R 8298111 8298174 -19606879 - Copia2_LTR_DM LTR Copia 0 198 136 4 648 1741 10 10 0 chr3R 8298172 8298365 -19606688 - Invader1_LTR LTR Gypsy -228 195 1 4 648 5636 8 18 0 chr3R 8298385 8299011 -19606042 - Copia2_I LTR Copia 0 4162 3526 4 648 1565 0 0 0 chr3R 8299365 8299535 -19605518 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3374 20 60 0 chr3R 8299535 8299934 -19605119 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8299934 8299966 -19605087 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5650 22 0 0 chr3R 8299966 8300603 -19604450 - Copia2_I LTR Copia 0 4162 3526 4 648 1565 0 0 0 chr3R 8300957 8301127 -19603926 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3374 20 60 0 chr3R 8301127 8301526 -19603527 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8301526 8301558 -19603495 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5650 22 0 0 chr3R 8301558 8302195 -19602858 - Copia2_I LTR Copia 0 4162 3526 4 648 1565 0 0 0 chr3R 8302549 8302719 -19602334 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3291 10 90 0 chr3R 8302719 8303107 -19601946 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 155 51 17 chr3R 8303692 8303751 -19601302 + (TA)n Simple_repeat Simple_repeat 2 62 0 4 648 1549 6 0 0 chr3R 8303883 8304053 -19601000 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3772 12 7 0 chr3R 8304053 8304473 -19600580 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8304473 8304505 -19600548 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5781 11 0 0 chr3R 8304505 8305142 -19599911 - Copia2_I LTR Copia 0 4162 3526 4 648 1565 0 0 0 chr3R 8305496 8305666 -19599387 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3120 6 6 0 chr3R 8305666 8306008 -19599045 - Invader1_LTR LTR Gypsy 0 423 80 4 648 5773 13 0 0 chr3R 8306027 8306664 -19598389 - Copia2_I LTR Copia 0 4162 3526 4 648 684 0 0 0 chr3R 8306817 8306892 -19598161 - Copia2_LTR_DM LTR Copia -95 103 29 4 648 3860 7 5 0 chr3R 8306892 8307313 -19597740 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8307313 8307345 -19597708 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5584 13 18 0 chr3R 8307345 8307971 -19597082 - Copia2_I LTR Copia 0 4162 3526 4 648 1536 6 0 0 chr3R 8308325 8308495 -19596558 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3857 9 5 0 chr3R 8308495 8308916 -19596137 - Invader1_LTR LTR Gypsy 0 423 1 4 648 4156 11 0 61 chr3R 8308924 8309431 -19595622 - MICROPIA_LTR LTR Gypsy 0 476 1 4 648 13829 11 0 5 chr3R 8309431 8310975 -19594078 - MICROPIA_I LTR Gypsy 0 4476 2941 4 648 4731 8 21 0 chr3R 8310976 8311499 -19593554 - Copia2_I LTR Copia -103 4059 3526 4 648 1463 24 0 0 chr3R 8311849 8312019 -19593034 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3734 12 9 0 chr3R 8312019 8312438 -19592615 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8312438 8312470 -19592583 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5781 11 0 0 chr3R 8312470 8313107 -19591946 - Copia2_I LTR Copia 0 4162 3526 4 648 1565 0 0 0 chr3R 8313461 8313631 -19591422 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3120 6 6 0 chr3R 8313631 8313973 -19591080 - Invader1_LTR LTR Gypsy 0 423 80 4 648 5773 13 0 0 chr3R 8313992 8314629 -19590424 - Copia2_I LTR Copia 0 4162 3526 4 648 684 0 0 0 chr3R 8314782 8314857 -19590196 - Copia2_LTR_DM LTR Copia -95 103 29 4 648 3860 7 5 0 chr3R 8314857 8315278 -19589775 - Invader1_LTR LTR Gypsy 0 423 1 4 648 229 29 0 0 chr3R 8315278 8315310 -19589743 - Copia2_LTR_DM LTR Copia -166 32 1 4 648 5584 13 18 0 chr3R 8315310 8315936 -19589117 - Copia2_I LTR Copia 0 4162 3526 4 648 1536 6 0 0 chr3R 8316290 8316460 -19588593 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3857 9 5 0 chr3R 8316460 8316881 -19588172 - Invader1_LTR LTR Gypsy 0 423 1 4 648 4156 11 0 61 chr3R 8316889 8317396 -19587657 - MICROPIA_LTR LTR Gypsy 0 476 1 4 648 33589 10 6 11 chr3R 8317396 8321151 -19583902 - MICROPIA_I LTR Gypsy 0 4476 742 4 648 5689 14 5 2 chr3R 8321140 8321773 -19583280 - MICROPIA_I LTR Gypsy -3841 635 1 4 648 3837 15 37 63 chr3R 8321773 8322262 -19582791 - MICROPIA_LTR LTR Gypsy 0 476 1 4 648 5672 19 0 0 chr3R 8322290 8322927 -19582126 - Copia2_I LTR Copia 0 4162 3526 4 648 1521 12 0 0 chr3R 8323248 8323418 -19581635 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3899 2 5 0 chr3R 8323418 8323839 -19581214 - Invader1_LTR LTR Gypsy 0 423 1 4 648 3837 15 37 63 chr3R 8323847 8324336 -19580717 - MICROPIA_LTR LTR Gypsy 0 476 1 4 648 5688 17 0 0 chr3R 8324364 8325001 -19580052 - Copia2_I LTR Copia 0 4162 3526 4 648 1548 6 0 0 chr3R 8325322 8325492 -19579561 - Copia2_LTR_DM LTR Copia 0 198 29 4 648 3899 2 5 0 chr3R 8325492 8325913 -19579140 - Invader1_LTR LTR Gypsy 0 423 1 4 648 5704 17 0 0 chr3R 8325945 8326582 -19578471 - Copia2_I LTR Copia 0 4162 3526 4 648 272 51 0 0 chr3R 8326663 8326702 -19578351 - Copia2_LTR_DM LTR Copia -159 39 1 4 648 3828 111 21 7 chr3R 8326917 8327523 -19577530 + S_DM DNA Tc1 1122 1736 0 4 648 786 104 49 0 chr3R 8327523 8327684 -19577369 + S_DM DNA Tc1 1568 1736 0 4 648 21 0 0 0 chr3R 8339405 8339426 -19565627 + AT_rich Low_complexity Low_complexity 1 21 0 4 648 238 274 24 0 chr3R 8340766 8340850 -19564203 + GA-rich Low_complexity Low_complexity 1 86 0 4 648 240 188 0 0 chr3R 8347930 8347978 -19557075 + (CTG)n Simple_repeat Simple_repeat 2 49 0 4 648 229 262 0 0 chr3R 8353192 8353253 -19551800 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 648 28 0 0 0 chr3R 8354759 8354787 -19550266 + AT_rich Low_complexity Low_complexity 1 28 0 4 648 231 36 0 0 chr3R 8359162 8359190 -19545863 + (CTG)n Simple_repeat Simple_repeat 3 30 0 4 648 25 31 0 0 chr3R 8359740 8359772 -19545281 + AT_rich Low_complexity Low_complexity 1 32 0 4 648 21 0 0 0 chr3R 8363033 8363054 -19541999 + AT_rich Low_complexity Low_complexity 1 21 0 4 648 25 0 0 0 chr3R 8363091 8363116 -19541937 + AT_rich Low_complexity Low_complexity 1 25 0 4 648 21 82 0 0 chr3R 8363833 8363882 -19541171 + AT_rich Low_complexity Low_complexity 1 49 0 4 648 183 80 0 0 chr3R 8364336 8364361 -19540692 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 648 210 128 0 0 chr3R 8367622 8367661 -19537392 + (CATAC)n Simple_repeat Simple_repeat 5 43 0 4 648 24 85 0 0 chr3R 8368923 8368982 -19536071 + AT_rich Low_complexity Low_complexity 1 59 0 4 648 23 0 0 0 chr3R 8370267 8370290 -19534763 + AT_rich Low_complexity Low_complexity 1 23 0 4 648 202 315 0 0 chr3R 8370892 8370946 -19534107 + (CCCGAA)n Simple_repeat Simple_repeat 4 57 0 4 648 212 256 0 25 chr3R 8373180 8373260 -19531793 + (TTG)n Simple_repeat Simple_repeat 1 78 0 4 648 183 42 0 0 chr3R 8376594 8376618 -19528435 + (TAA)n Simple_repeat Simple_repeat 1 24 0 4 648 213 197 66 0 chr3R 8376626 8376687 -19528366 + (CATATA)n Simple_repeat Simple_repeat 1 65 0 4 648 24 0 0 0 chr3R 8387262 8387286 -19517767 + AT_rich Low_complexity Low_complexity 1 24 0 4 648 24 53 0 0 chr3R 8387977 8388015 -19517038 + AT_rich Low_complexity Low_complexity 1 38 0 4 649 29 0 0 0 chr3R 8388953 8388982 -19516071 + AT_rich Low_complexity Low_complexity 1 29 0 4 649 34 0 0 0 chr3R 8389064 8389098 -19515955 + AT_rich Low_complexity Low_complexity 1 34 0 4 649 214 203 36 48 chr3R 8389454 8389537 -19515516 + (TCTCTG)n Simple_repeat Simple_repeat 6 87 0 4 649 216 0 0 0 chr3R 8391461 8391485 -19513568 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 649 25 90 0 0 chr3R 8392214 8392281 -19512772 + AT_rich Low_complexity Low_complexity 1 67 0 4 649 198 0 0 0 chr3R 8393793 8393815 -19511238 + (CATCC)n Simple_repeat Simple_repeat 1 22 0 4 649 21 0 0 0 chr3R 8394546 8394567 -19510486 + AT_rich Low_complexity Low_complexity 1 21 0 4 649 22 0 0 0 chr3R 8397322 8397344 -19507709 + AT_rich Low_complexity Low_complexity 1 22 0 4 649 25 0 0 0 chr3R 8398863 8398888 -19506165 + AT_rich Low_complexity Low_complexity 1 25 0 4 649 21 0 0 0 chr3R 8399934 8399955 -19505098 + AT_rich Low_complexity Low_complexity 1 21 0 4 649 232 240 227 32 chr3R 8400900 8401085 -19503968 + DNAREP1_DM LINE Penelope 1 221 -373 4 649 189 0 0 0 chr3R 8401120 8401141 -19503912 + (TAA)n Simple_repeat Simple_repeat 2 22 0 4 649 206 140 19 39 chr3R 8401374 8401426 -19503627 + A-rich Low_complexity Low_complexity 3 53 0 4 649 183 80 0 0 chr3R 8402924 8402949 -19502104 + (TGGG)n Simple_repeat Simple_repeat 2 26 0 4 649 207 146 0 0 chr3R 8403529 8403570 -19501483 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 649 24 0 0 0 chr3R 8404421 8404445 -19500608 + AT_rich Low_complexity Low_complexity 1 24 0 4 649 21 0 0 0 chr3R 8404866 8404887 -19500166 + AT_rich Low_complexity Low_complexity 1 21 0 4 649 230 242 0 0 chr3R 8406406 8406468 -19498585 + (CAACT)n Simple_repeat Simple_repeat 3 64 0 4 649 282 106 0 0 chr3R 8408347 8408394 -19496659 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 649 36 40 0 0 chr3R 8411262 8411312 -19493741 + AT_rich Low_complexity Low_complexity 1 50 0 4 649 22 35 0 0 chr3R 8412705 8412734 -19492319 + AT_rich Low_complexity Low_complexity 1 29 0 4 649 225 0 0 0 chr3R 8413398 8413423 -19491630 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 4 649 273 188 15 15 chr3R 8414112 8414177 -19490876 - ROO_I LTR Pao -7515 741 677 4 649 180 111 0 0 chr3R 8414522 8414549 -19490504 + (TTTTTA)n Simple_repeat Simple_repeat 5 31 0 4 649 327 136 61 0 chr3R 8414635 8414701 -19490352 + HOBO DNA hAT 193 262 -2754 4 649 41 21 0 0 chr3R 8414702 8414750 -19490303 + AT_rich Low_complexity Low_complexity 1 48 0 4 649 38 61 0 0 chr3R 8414810 8414876 -19490177 + AT_rich Low_complexity Low_complexity 1 66 0 4 649 23 54 0 0 chr3R 8414928 8414965 -19490088 + AT_rich Low_complexity Low_complexity 1 37 0 4 649 282 200 14 0 chr3R 8414998 8415068 -19489985 + HOBO DNA hAT 2942 3012 -4 4 649 226 196 0 35 chr3R 8416204 8416262 -19488791 + T-rich Low_complexity Low_complexity 4 59 0 4 649 189 0 0 0 chr3R 8416947 8416968 -19488085 + (CGA)n Simple_repeat Simple_repeat 2 22 0 4 649 21 71 0 0 chr3R 8418641 8418683 -19486370 + AT_rich Low_complexity Low_complexity 1 42 0 4 649 192 200 0 0 chr3R 8419485 8419525 -19485528 + (CAT)n Simple_repeat Simple_repeat 1 40 0 4 649 21 36 0 0 chr3R 8420918 8420946 -19484107 + AT_rich Low_complexity Low_complexity 1 28 0 4 649 21 0 0 0 chr3R 8425094 8425115 -19479938 + AT_rich Low_complexity Low_complexity 1 21 0 4 649 211 196 0 0 chr3R 8425567 8425613 -19479440 + (CTG)n Simple_repeat Simple_repeat 2 47 0 4 649 259 218 0 0 chr3R 8427853 8427908 -19477145 + (CTG)n Simple_repeat Simple_repeat 3 57 0 4 649 249 83 0 0 chr3R 8434454 8434490 -19470563 + (TTG)n Simple_repeat Simple_repeat 1 36 0 4 649 21 36 0 0 chr3R 8434762 8434790 -19470263 + AT_rich Low_complexity Low_complexity 1 28 0 4 649 183 170 0 0 chr3R 8436556 8436603 -19468450 + (ATGGTG)n Simple_repeat Simple_repeat 3 49 0 4 649 204 97 0 0 chr3R 8438437 8438468 -19466585 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 649 192 111 0 0 chr3R 8438516 8438552 -19466501 + (GGA)n Simple_repeat Simple_repeat 1 36 0 4 649 24 0 0 0 chr3R 8440887 8440911 -19464142 + AT_rich Low_complexity Low_complexity 1 24 0 4 649 35 24 0 0 chr3R 8446738 8446780 -19458273 + AT_rich Low_complexity Low_complexity 1 42 0 4 649 185 0 0 39 chr3R 8447149 8447175 -19457878 + (CGG)n Simple_repeat Simple_repeat 2 26 0 4 649 218 130 18 53 chr3R 8448446 8448503 -19456550 + CT-rich Low_complexity Low_complexity 2 56 0 4 649 333 100 0 0 chr3R 8454373 8454423 -19450630 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 649 185 100 39 39 chr3R 8455477 8455529 -19449524 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 4 649 21 36 0 0 chr3R 8456060 8456088 -19448965 + AT_rich Low_complexity Low_complexity 1 28 0 4 649 41 58 0 0 chr3R 8456204 8456273 -19448780 + AT_rich Low_complexity Low_complexity 1 69 0 4 649 22 56 0 0 chr3R 8461468 8461504 -19443549 + AT_rich Low_complexity Low_complexity 1 36 0 4 649 22 35 0 0 chr3R 8463678 8463707 -19441346 + AT_rich Low_complexity Low_complexity 1 29 0 4 649 28 0 0 0 chr3R 8464135 8464163 -19440890 + AT_rich Low_complexity Low_complexity 1 28 0 4 649 22 0 0 0 chr3R 8465897 8465919 -19439134 + AT_rich Low_complexity Low_complexity 1 22 0 4 649 27 0 0 0 chr3R 8469865 8469892 -19435161 + AT_rich Low_complexity Low_complexity 1 27 0 4 649 247 222 0 0 chr3R 8473686 8473749 -19431304 + ROO_I LTR Pao 667 729 -7527 4 649 27 49 0 0 chr3R 8476316 8476357 -19428696 + AT_rich Low_complexity Low_complexity 1 41 0 4 649 249 254 0 0 chr3R 8480155 8480222 -19424831 + CT-rich Low_complexity Low_complexity 2 68 0 4 649 21 36 0 0 chr3R 8486623 8486651 -19418402 + AT_rich Low_complexity Low_complexity 1 28 0 4 649 25 31 0 0 chr3R 8486658 8486690 -19418363 + AT_rich Low_complexity Low_complexity 1 32 0 4 649 206 240 0 0 chr3R 8488460 8488510 -19416543 + (TCTCTG)n Simple_repeat Simple_repeat 2 51 0 4 649 266 0 29 0 chr3R 8493813 8493847 -19411206 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 649 22 56 0 0 chr3R 8496631 8496667 -19408386 + AT_rich Low_complexity Low_complexity 1 36 0 4 649 24 53 0 0 chr3R 8499634 8499672 -19405381 + AT_rich Low_complexity Low_complexity 1 38 0 4 649 255 60 39 20 chr3R 8502262 8502313 -19402740 + (TTA)n Simple_repeat Simple_repeat 2 53 0 4 649 271 133 364 26 chr3R 8507781 8507858 -19397195 + DNAREP1_DM LINE Penelope 430 532 -62 4 649 27 0 0 0 chr3R 8507918 8507945 -19397108 + AT_rich Low_complexity Low_complexity 1 27 0 4 649 22 56 0 0 chr3R 8510495 8510531 -19394522 + AT_rich Low_complexity Low_complexity 1 36 0 4 649 24 32 0 0 chr3R 8512889 8512920 -19392133 + AT_rich Low_complexity Low_complexity 1 31 0 4 649 24 53 0 0 chr3R 8517295 8517333 -19387720 + AT_rich Low_complexity Low_complexity 1 38 0 4 650 203 156 0 0 chr3R 8527995 8528027 -19377026 + (TGAG)n Simple_repeat Simple_repeat 3 34 0 4 650 232 160 51 39 chr3R 8545920 8545998 -19359055 + (TTATA)n Simple_repeat Simple_repeat 5 83 0 4 650 23 54 0 0 chr3R 8547644 8547681 -19357372 + AT_rich Low_complexity Low_complexity 1 37 0 4 650 30 0 0 0 chr3R 8549548 8549578 -19355475 + AT_rich Low_complexity Low_complexity 1 30 0 4 650 24 0 0 0 chr3R 8551306 8551330 -19353723 + AT_rich Low_complexity Low_complexity 1 24 0 4 650 30 0 0 0 chr3R 8551394 8551424 -19353629 + AT_rich Low_complexity Low_complexity 1 30 0 4 650 21 0 0 0 chr3R 8552285 8552306 -19352747 + AT_rich Low_complexity Low_complexity 1 21 0 4 650 240 35 0 0 chr3R 8556446 8556475 -19348578 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 650 222 128 0 0 chr3R 8557131 8557170 -19347883 + (CAAA)n Simple_repeat Simple_repeat 3 41 0 4 650 28 0 0 0 chr3R 8558023 8558051 -19347002 + AT_rich Low_complexity Low_complexity 1 28 0 4 650 29 0 0 0 chr3R 8561058 8561087 -19343966 + AT_rich Low_complexity Low_complexity 1 29 0 4 650 23 0 0 0 chr3R 8561722 8561745 -19343308 + AT_rich Low_complexity Low_complexity 1 23 0 4 650 687 164 132 0 chr3R 8562949 8563108 -19341945 - XDMR Unknown Unknown -135 226 47 4 650 594 183 172 0 chr3R 8563101 8563270 -19341783 - XDMR Unknown Unknown -163 198 1 4 650 899 183 23 19 chr3R 8563240 8563537 -19341516 - XDMR Unknown Unknown 0 360 55 4 650 25 0 0 0 chr3R 8567675 8567700 -19337353 + AT_rich Low_complexity Low_complexity 1 25 0 4 650 22 70 0 0 chr3R 8567711 8567754 -19337299 + AT_rich Low_complexity Low_complexity 1 43 0 4 650 22 0 0 0 chr3R 8569667 8569689 -19335364 + AT_rich Low_complexity Low_complexity 1 22 0 4 650 21 0 0 0 chr3R 8571580 8571601 -19333452 + AT_rich Low_complexity Low_complexity 1 21 0 4 650 29 28 0 0 chr3R 8573102 8573138 -19331915 + AT_rich Low_complexity Low_complexity 1 36 0 4 650 22 56 0 0 chr3R 8575678 8575714 -19329339 + AT_rich Low_complexity Low_complexity 1 36 0 4 650 198 0 0 0 chr3R 8576052 8576074 -19328979 + (CTG)n Simple_repeat Simple_repeat 3 24 0 4 650 22 0 0 0 chr3R 8578052 8578074 -19326979 + AT_rich Low_complexity Low_complexity 1 22 0 4 650 21 0 0 0 chr3R 8578464 8578485 -19326568 + AT_rich Low_complexity Low_complexity 1 21 0 4 650 23 97 0 0 chr3R 8579422 8579494 -19325559 + AT_rich Low_complexity Low_complexity 1 72 0 4 650 24 32 0 0 chr3R 8581204 8581235 -19323818 + AT_rich Low_complexity Low_complexity 1 31 0 4 650 309 140 0 0 chr3R 8583114 8583171 -19321882 + (CAGA)n Simple_repeat Simple_repeat 3 59 0 4 650 23 0 0 0 chr3R 8585787 8585810 -19319243 + AT_rich Low_complexity Low_complexity 1 23 0 4 650 28 61 0 0 chr3R 8590368 8590417 -19314636 + AT_rich Low_complexity Low_complexity 1 49 0 4 650 195 42 0 0 chr3R 8591668 8591692 -19313361 + (AGATG)n Simple_repeat Simple_repeat 1 24 0 4 650 36 0 0 0 chr3R 8592051 8592087 -19312966 + AT_rich Low_complexity Low_complexity 1 36 0 4 650 234 0 0 0 chr3R 8593277 8593303 -19311750 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 650 273 248 17 50 chr3R 8593455 8593574 -19311479 + (CAA)n Simple_repeat Simple_repeat 3 117 0 4 650 37 52 0 0 chr3R 8593774 8593832 -19311221 + AT_rich Low_complexity Low_complexity 1 58 0 4 650 27 0 0 0 chr3R 8594348 8594375 -19310678 + AT_rich Low_complexity Low_complexity 1 27 0 4 650 26 0 0 0 chr3R 8594558 8594584 -19310469 + AT_rich Low_complexity Low_complexity 1 26 0 4 650 21 82 0 0 chr3R 8595359 8595408 -19309645 + AT_rich Low_complexity Low_complexity 1 49 0 4 650 246 62 0 0 chr3R 8597341 8597373 -19307680 + (TCCTG)n Simple_repeat Simple_repeat 5 36 0 4 650 42 20 0 0 chr3R 8605378 8605427 -19299626 + AT_rich Low_complexity Low_complexity 1 49 0 4 650 464 31 0 0 chr3R 8606046 8606110 -19298943 + BS LINE Jockey 5060 5123 -3 4 650 24 0 0 0 chr3R 8606644 8606668 -19298385 + AT_rich Low_complexity Low_complexity 1 24 0 4 650 210 174 0 0 chr3R 8607113 8607159 -19297894 + (CAT)n Simple_repeat Simple_repeat 1 46 0 4 650 23 54 0 0 chr3R 8607620 8607657 -19297396 + AT_rich Low_complexity Low_complexity 1 37 0 4 650 222 37 0 0 chr3R 8607775 8607802 -19297251 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 4 650 48 32 0 0 chr3R 8608465 8608527 -19296526 + AT_rich Low_complexity Low_complexity 1 62 0 4 650 22 0 0 0 chr3R 8611714 8611736 -19293317 + AT_rich Low_complexity Low_complexity 1 22 0 4 650 186 143 0 0 chr3R 8613970 8614005 -19291048 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 650 25 31 0 0 chr3R 8617046 8617078 -19287975 + AT_rich Low_complexity Low_complexity 1 32 0 4 650 23 0 0 0 chr3R 8617325 8617348 -19287705 + AT_rich Low_complexity Low_complexity 1 23 0 4 650 21 0 0 0 chr3R 8617503 8617524 -19287529 + AT_rich Low_complexity Low_complexity 1 21 0 4 650 28 79 0 0 chr3R 8620335 8620398 -19284655 + AT_rich Low_complexity Low_complexity 1 63 0 4 650 21 82 0 0 chr3R 8624075 8624124 -19280929 + AT_rich Low_complexity Low_complexity 1 49 0 4 650 34 42 0 0 chr3R 8628238 8628286 -19276767 + AT_rich Low_complexity Low_complexity 1 48 0 4 650 24 0 0 0 chr3R 8630087 8630111 -19274942 + AT_rich Low_complexity Low_complexity 1 24 0 4 650 24 0 0 0 chr3R 8630186 8630210 -19274843 + AT_rich Low_complexity Low_complexity 1 24 0 4 650 24 77 0 0 chr3R 8634152 8634204 -19270849 + AT_rich Low_complexity Low_complexity 1 52 0 4 650 21 0 0 0 chr3R 8634981 8635002 -19270051 + AT_rich Low_complexity Low_complexity 1 21 0 4 650 226 330 0 0 chr3R 8635752 8635855 -19269198 + (CA)n Simple_repeat Simple_repeat 1 103 0 4 650 22 0 0 0 chr3R 8636664 8636686 -19268367 + AT_rich Low_complexity Low_complexity 1 22 0 4 650 30 59 0 0 chr3R 8637504 8637555 -19267498 + AT_rich Low_complexity Low_complexity 1 51 0 4 650 22 0 0 0 chr3R 8640587 8640609 -19264444 + AT_rich Low_complexity Low_complexity 1 22 0 4 650 22 0 0 0 chr3R 8644979 8645001 -19260052 + AT_rich Low_complexity Low_complexity 1 22 0 4 650 202 211 0 0 chr3R 8645440 8645478 -19259575 + (ATGGTG)n Simple_repeat Simple_repeat 1 38 0 4 650 770 181 80 23 chr3R 8647060 8647235 -19257818 - DNAREP1_DM LINE Penelope -1 593 409 4 650 424 100 0 0 chr3R 8647239 8647299 -19257754 - DNAREP1_DM LINE Penelope -534 60 1 4 651 220 260 13 0 chr3R 8652290 8652367 -19252686 + (TGAG)n Simple_repeat Simple_repeat 2 79 0 4 651 205 175 50 0 chr3R 8652481 8652521 -19252532 + (TCTCTG)n Simple_repeat Simple_repeat 3 44 0 4 651 22 0 0 0 chr3R 8653795 8653817 -19251236 + AT_rich Low_complexity Low_complexity 1 22 0 4 651 24 32 0 0 chr3R 8655022 8655053 -19250000 + AT_rich Low_complexity Low_complexity 1 31 0 4 651 204 235 0 0 chr3R 8656676 8656744 -19248309 + CT-rich Low_complexity Low_complexity 3 70 0 4 651 22 0 0 0 chr3R 8658836 8658858 -19246195 + AT_rich Low_complexity Low_complexity 1 22 0 4 651 23 0 0 0 chr3R 8660410 8660433 -19244620 + AT_rich Low_complexity Low_complexity 1 23 0 4 651 23 33 0 0 chr3R 8664174 8664204 -19240849 + AT_rich Low_complexity Low_complexity 1 30 0 4 651 21 89 0 0 chr3R 8667473 8667529 -19237524 + AT_rich Low_complexity Low_complexity 1 56 0 4 651 28 71 0 0 chr3R 8667626 8667682 -19237371 + AT_rich Low_complexity Low_complexity 1 56 0 4 651 252 122 0 0 chr3R 8667795 8667836 -19237217 + (CTAA)n Simple_repeat Simple_repeat 1 41 0 4 651 27 0 0 0 chr3R 8668835 8668862 -19236191 + AT_rich Low_complexity Low_complexity 1 27 0 4 651 28 0 0 0 chr3R 8671743 8671771 -19233282 + AT_rich Low_complexity Low_complexity 1 28 0 4 651 201 74 0 0 chr3R 8672263 8672290 -19232763 + (CTG)n Simple_repeat Simple_repeat 3 29 0 4 651 21 0 0 0 chr3R 8672642 8672663 -19232390 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 291 93 0 0 chr3R 8675097 8675140 -19229913 + (CTG)n Simple_repeat Simple_repeat 2 44 0 4 651 21 36 0 0 chr3R 8676059 8676087 -19228966 + AT_rich Low_complexity Low_complexity 1 28 0 4 651 43 71 0 0 chr3R 8678334 8678419 -19226634 + AT_rich Low_complexity Low_complexity 1 85 0 4 651 21 0 0 0 chr3R 8679442 8679463 -19225590 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 23 86 0 0 chr3R 8679669 8679727 -19225326 + AT_rich Low_complexity Low_complexity 1 58 0 4 651 27 0 0 0 chr3R 8680194 8680221 -19224832 + AT_rich Low_complexity Low_complexity 1 27 0 4 651 229 208 0 0 chr3R 8684348 8684401 -19220652 + T-rich Low_complexity Low_complexity 1 53 0 4 651 42 20 0 0 chr3R 8689210 8689259 -19215794 + AT_rich Low_complexity Low_complexity 1 49 0 4 651 54 16 0 0 chr3R 8690264 8690325 -19214728 + AT_rich Low_complexity Low_complexity 1 61 0 4 651 3742 2 0 0 chr3R 8690338 8690766 -19214287 + ROO_LTR LTR Pao 1 428 0 4 651 22 0 0 0 chr3R 8690778 8690800 -19214253 + AT_rich Low_complexity Low_complexity 1 22 0 4 651 21 71 0 0 chr3R 8690841 8690883 -19214170 + AT_rich Low_complexity Low_complexity 1 42 0 4 651 31 0 0 0 chr3R 8691521 8691552 -19213501 + AT_rich Low_complexity Low_complexity 1 31 0 4 651 25 0 0 0 chr3R 8698232 8698257 -19206796 + AT_rich Low_complexity Low_complexity 1 25 0 4 651 201 262 16 16 chr3R 8700762 8700824 -19204229 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 651 22 56 0 0 chr3R 8702659 8702695 -19202358 + AT_rich Low_complexity Low_complexity 1 36 0 4 651 23 0 0 0 chr3R 8705469 8705492 -19199561 + AT_rich Low_complexity Low_complexity 1 23 0 4 651 219 143 30 45 chr3R 8707576 8707642 -19197411 + (TAAA)n Simple_repeat Simple_repeat 1 65 0 4 651 189 74 0 0 chr3R 8709114 8709141 -19195912 + (TA)n Simple_repeat Simple_repeat 2 28 0 4 651 23 0 0 0 chr3R 8714635 8714658 -19190395 + AT_rich Low_complexity Low_complexity 1 23 0 4 651 21 0 0 0 chr3R 8716420 8716441 -19188612 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 23 33 0 0 chr3R 8716500 8716530 -19188523 + AT_rich Low_complexity Low_complexity 1 30 0 4 651 21 0 0 0 chr3R 8718160 8718181 -19186872 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 23 0 0 0 chr3R 8718944 8718967 -19186086 + AT_rich Low_complexity Low_complexity 1 23 0 4 651 21 57 0 0 chr3R 8719045 8719080 -19185973 + AT_rich Low_complexity Low_complexity 1 35 0 4 651 250 235 61 75 chr3R 8721525 8721672 -19183381 + DNAREP1_DM LINE Penelope 9 153 -441 4 651 370 237 69 86 chr3R 8721682 8721857 -19183196 + DNAREP1_DM LINE Penelope 341 512 -82 4 651 25 0 0 0 chr3R 8721857 8721882 -19183171 + AT_rich Low_complexity Low_complexity 1 25 0 4 651 198 143 0 0 chr3R 8723606 8723641 -19181412 + (CAG)n Simple_repeat Simple_repeat 1 35 0 4 651 198 0 0 0 chr3R 8725163 8725185 -19179868 + (A)n Simple_repeat Simple_repeat 1 22 0 4 651 21 0 0 0 chr3R 8725194 8725215 -19179838 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 21 0 0 0 chr3R 8727828 8727849 -19177204 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 24 0 0 0 chr3R 8729788 8729812 -19175241 + AT_rich Low_complexity Low_complexity 1 24 0 4 651 198 91 0 0 chr3R 8731521 8731554 -19173499 + (CTG)n Simple_repeat Simple_repeat 1 33 0 4 651 35 78 0 0 chr3R 8731808 8731885 -19173168 + AT_rich Low_complexity Low_complexity 1 77 0 4 651 262 194 0 27 chr3R 8734855 8734929 -19170124 + (TA)n Simple_repeat Simple_repeat 2 73 0 4 651 23 54 0 0 chr3R 8737081 8737118 -19167935 + AT_rich Low_complexity Low_complexity 1 37 0 4 651 273 167 0 0 chr3R 8737467 8737527 -19167526 + ROO_I LTR Pao 682 741 -7515 4 651 2260 0 4 0 chr3R 8745929 8746204 -19158849 - Copia_LTR LTR Copia 0 276 1 4 651 39239 1 0 0 chr3R 8746204 8750799 -19154254 - Copia_I LTR Copia 0 4593 1 4 651 2260 0 4 0 chr3R 8750799 8751074 -19153979 - Copia_LTR LTR Copia 0 276 1 4 651 273 118 0 0 chr3R 8751520 8751571 -19153482 + (T)n Simple_repeat Simple_repeat 1 51 0 4 651 273 259 0 0 chr3R 8753339 8753420 -19151633 - ROO_I LTR Pao -7524 732 652 4 651 35 24 0 0 chr3R 8754960 8755002 -19150051 + AT_rich Low_complexity Low_complexity 1 42 0 4 651 25 0 0 0 chr3R 8755204 8755229 -19149824 + AT_rich Low_complexity Low_complexity 1 25 0 4 651 204 40 0 0 chr3R 8756506 8756531 -19148522 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 651 183 100 0 0 chr3R 8758330 8758360 -19146693 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 651 22 0 0 0 chr3R 8758641 8758663 -19146390 + AT_rich Low_complexity Low_complexity 1 22 0 4 651 22 0 0 0 chr3R 8759037 8759059 -19145994 + AT_rich Low_complexity Low_complexity 1 22 0 4 651 27 29 0 0 chr3R 8759763 8759797 -19145256 + AT_rich Low_complexity Low_complexity 1 34 0 4 651 21 0 0 0 chr3R 8761201 8761222 -19143831 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 21 57 0 0 chr3R 8761286 8761321 -19143732 + AT_rich Low_complexity Low_complexity 1 35 0 4 651 251 214 0 0 chr3R 8762413 8762469 -19142584 + GA-rich Low_complexity Low_complexity 1 56 0 4 651 180 77 0 0 chr3R 8763286 8763312 -19141741 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 651 26 30 0 0 chr3R 8763661 8763694 -19141359 + AT_rich Low_complexity Low_complexity 1 33 0 4 651 25 0 0 0 chr3R 8764655 8764680 -19140373 + AT_rich Low_complexity Low_complexity 1 25 0 4 651 27 29 0 0 chr3R 8768562 8768596 -19136457 + AT_rich Low_complexity Low_complexity 1 34 0 4 651 21 0 0 0 chr3R 8768755 8768776 -19136277 + AT_rich Low_complexity Low_complexity 1 21 0 4 651 29 60 0 0 chr3R 8770431 8770481 -19134572 + AT_rich Low_complexity Low_complexity 1 50 0 4 651 24 53 0 0 chr3R 8772271 8772309 -19132744 + AT_rich Low_complexity Low_complexity 1 38 0 4 651 27 49 0 0 chr3R 8772331 8772372 -19132681 + AT_rich Low_complexity Low_complexity 1 41 0 4 651 239 182 18 18 chr3R 8775457 8775513 -19129540 + (CAG)n Simple_repeat Simple_repeat 3 58 0 4 651 216 0 0 0 chr3R 8777018 8777042 -19128011 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 651 231 114 0 0 chr3R 8779696 8779731 -19125322 + (TGGA)n Simple_repeat Simple_repeat 1 35 0 4 651 216 163 0 0 chr3R 8781428 8781471 -19123582 + (CAGC)n Simple_repeat Simple_repeat 1 43 0 4 651 189 107 0 0 chr3R 8781664 8781692 -19123361 + (CCGAA)n Simple_repeat Simple_repeat 3 30 0 4 652 342 0 0 0 chr3R 8781942 8781980 -19123073 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 652 212 254 17 0 chr3R 8783220 8783279 -19121774 + (CAG)n Simple_repeat Simple_repeat 3 62 0 4 652 28 29 0 0 chr3R 8786683 8786718 -19118335 + AT_rich Low_complexity Low_complexity 1 35 0 4 652 31 26 0 0 chr3R 8792829 8792867 -19112186 + AT_rich Low_complexity Low_complexity 1 38 0 4 652 207 200 0 0 chr3R 8795502 8795547 -19109506 + (TGG)n Simple_repeat Simple_repeat 1 45 0 4 652 21 57 0 0 chr3R 8800356 8800391 -19104662 + AT_rich Low_complexity Low_complexity 1 35 0 4 652 24 0 0 0 chr3R 8800444 8800468 -19104585 + AT_rich Low_complexity Low_complexity 1 24 0 4 652 21 0 0 0 chr3R 8805224 8805245 -19099808 + AT_rich Low_complexity Low_complexity 1 21 0 4 652 24 32 0 0 chr3R 8808331 8808362 -19096691 + AT_rich Low_complexity Low_complexity 1 31 0 4 652 24 32 0 0 chr3R 8809335 8809366 -19095687 + AT_rich Low_complexity Low_complexity 1 31 0 4 652 24 0 0 0 chr3R 8811295 8811319 -19093734 + AT_rich Low_complexity Low_complexity 1 24 0 4 652 23 54 0 0 chr3R 8813083 8813120 -19091933 + AT_rich Low_complexity Low_complexity 1 37 0 4 652 250 159 14 14 chr3R 8816789 8816859 -19088194 + (TA)n Simple_repeat Simple_repeat 1 70 0 4 652 221 299 0 0 chr3R 8824068 8824135 -19080918 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 652 46 19 0 0 chr3R 8826729 8826782 -19078271 + AT_rich Low_complexity Low_complexity 1 53 0 4 652 24 0 0 0 chr3R 8827908 8827932 -19077121 + AT_rich Low_complexity Low_complexity 1 24 0 4 652 244 145 182 13 chr3R 8827975 8828052 -19077001 - G6_DM LINE Jockey -19 2023 1934 4 652 255 177 0 0 chr3R 8830121 8830183 -19074870 + (CAG)n Simple_repeat Simple_repeat 3 64 0 4 652 270 0 0 0 chr3R 8832600 8832630 -19072423 + (CAG)n Simple_repeat Simple_repeat 1 30 0 4 652 261 57 0 0 chr3R 8833080 8833115 -19071938 + (A)n Simple_repeat Simple_repeat 1 35 0 4 652 23 0 0 0 chr3R 8835825 8835848 -19069205 + AT_rich Low_complexity Low_complexity 1 23 0 4 652 216 209 0 0 chr3R 8837862 8837905 -19067148 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 652 189 139 0 0 chr3R 8838053 8838096 -19066957 + (TGAG)n Simple_repeat Simple_repeat 2 44 0 4 652 194 174 0 21 chr3R 8838837 8838884 -19066169 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 652 204 40 0 0 chr3R 8840330 8840355 -19064698 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 652 180 0 0 0 chr3R 8840481 8840501 -19064552 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 652 206 62 31 0 chr3R 8841643 8841675 -19063378 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 652 214 195 0 0 chr3R 8843308 8843349 -19061704 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 652 270 125 0 0 chr3R 8843533 8843581 -19061472 + (T)n Simple_repeat Simple_repeat 1 48 0 4 652 207 146 0 0 chr3R 8844954 8844995 -19060058 + (T)n Simple_repeat Simple_repeat 1 41 0 4 652 219 88 0 0 chr3R 8847441 8847475 -19057578 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 652 278 132 39 13 chr3R 8847551 8847628 -19057425 + (CA)n Simple_repeat Simple_repeat 2 80 0 4 652 447 134 0 0 chr3R 8847795 8847877 -19057176 + (TA)n Simple_repeat Simple_repeat 1 82 0 4 652 198 71 0 0 chr3R 8848800 8848828 -19056225 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 652 333 259 9 18 chr3R 8849459 8849573 -19055480 + (CA)n Simple_repeat Simple_repeat 1 113 0 4 652 249 214 0 0 chr3R 8849830 8849886 -19055167 + A-rich Low_complexity Low_complexity 1 56 0 4 652 261 0 0 0 chr3R 8850398 8850427 -19054626 + (CCAA)n Simple_repeat Simple_repeat 3 31 0 4 652 226 266 16 0 chr3R 8850649 8850713 -19054340 + (CCG)n Simple_repeat Simple_repeat 3 67 0 4 652 192 40 0 0 chr3R 8851305 8851330 -19053723 + (GGA)n Simple_repeat Simple_repeat 2 26 0 4 652 213 65 0 115 chr3R 8851884 8851936 -19053117 + A-rich Low_complexity Low_complexity 5 50 0 4 652 202 29 57 0 chr3R 8852255 8852290 -19052763 + (TATAG)n Simple_repeat Simple_repeat 4 40 0 4 652 22 0 0 0 chr3R 8854761 8854783 -19050270 + AT_rich Low_complexity Low_complexity 1 22 0 4 652 22 80 0 0 chr3R 8862160 8862210 -19042843 + AT_rich Low_complexity Low_complexity 1 50 0 4 652 25 0 0 0 chr3R 8863574 8863599 -19041454 + AT_rich Low_complexity Low_complexity 1 25 0 4 652 36 82 0 0 chr3R 8865831 8865916 -19039137 + AT_rich Low_complexity Low_complexity 1 85 0 4 652 24 32 0 0 chr3R 8869411 8869442 -19035611 + AT_rich Low_complexity Low_complexity 1 31 0 4 652 35 24 0 0 chr3R 8869574 8869616 -19035437 + AT_rich Low_complexity Low_complexity 1 42 0 4 652 24 32 0 0 chr3R 8869763 8869794 -19035259 + AT_rich Low_complexity Low_complexity 1 31 0 4 652 28 29 0 0 chr3R 8870146 8870181 -19034872 + AT_rich Low_complexity Low_complexity 1 35 0 4 652 25 31 0 0 chr3R 8870279 8870311 -19034742 + AT_rich Low_complexity Low_complexity 1 32 0 4 652 30 0 0 0 chr3R 8874768 8874798 -19030255 + AT_rich Low_complexity Low_complexity 1 30 0 4 652 29 0 0 0 chr3R 8875379 8875408 -19029645 + AT_rich Low_complexity Low_complexity 1 29 0 4 652 30 27 0 0 chr3R 8877478 8877515 -19027538 + AT_rich Low_complexity Low_complexity 1 37 0 4 652 23 0 0 0 chr3R 8882422 8882445 -19022608 + AT_rich Low_complexity Low_complexity 1 23 0 4 652 350 108 15 0 chr3R 8883375 8883440 -19021613 + (CTG)n Simple_repeat Simple_repeat 3 68 0 4 652 218 176 39 0 chr3R 8883538 8883589 -19021464 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 652 31 0 0 0 chr3R 8883626 8883657 -19021396 + AT_rich Low_complexity Low_complexity 1 31 0 4 652 21 0 0 0 chr3R 8885733 8885754 -19019299 + AT_rich Low_complexity Low_complexity 1 21 0 4 652 29 0 0 0 chr3R 8888603 8888632 -19016421 + AT_rich Low_complexity Low_complexity 1 29 0 4 652 22 35 0 0 chr3R 8889162 8889191 -19015862 + AT_rich Low_complexity Low_complexity 1 29 0 4 652 218 56 28 0 chr3R 8889755 8889791 -19015262 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 652 192 40 0 0 chr3R 8890183 8890208 -19014845 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 652 189 0 0 0 chr3R 8890910 8890931 -19014122 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 4 652 22 99 0 0 chr3R 8891725 8891796 -19013257 + AT_rich Low_complexity Low_complexity 1 71 0 4 652 273 247 24 0 chr3R 8892532 8892617 -19012436 + (TTG)n Simple_repeat Simple_repeat 1 87 0 4 652 27 62 0 0 chr3R 8892773 8892821 -19012232 + AT_rich Low_complexity Low_complexity 1 48 0 4 652 186 133 0 0 chr3R 8893767 8893797 -19011256 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 652 27 29 0 0 chr3R 8894575 8894609 -19010444 + AT_rich Low_complexity Low_complexity 1 34 0 4 652 27 92 0 0 chr3R 8896628 8896704 -19008349 + AT_rich Low_complexity Low_complexity 1 76 0 4 652 23 33 0 0 chr3R 8897313 8897343 -19007710 + AT_rich Low_complexity Low_complexity 1 30 0 4 652 216 0 0 0 chr3R 8899072 8899096 -19005957 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 652 208 143 0 0 chr3R 8899179 8899214 -19005839 + (TTGG)n Simple_repeat Simple_repeat 4 38 0 4 652 29 0 0 0 chr3R 8900235 8900264 -19004789 + AT_rich Low_complexity Low_complexity 1 29 0 4 652 255 103 0 0 chr3R 8900451 8900490 -19004563 + (TC)n Simple_repeat Simple_repeat 1 39 0 4 652 209 288 0 40 chr3R 8902615 8902691 -19002362 + (CAG)n Simple_repeat Simple_repeat 2 74 0 4 652 210 91 0 0 chr3R 8903109 8903142 -19001911 + (CAG)n Simple_repeat Simple_repeat 3 35 0 4 652 24 53 0 0 chr3R 8904404 8904442 -19000611 + AT_rich Low_complexity Low_complexity 1 38 0 4 652 21 100 0 0 chr3R 8905848 8905918 -18999135 + AT_rich Low_complexity Low_complexity 1 70 0 4 652 210 37 0 0 chr3R 8906699 8906726 -18998327 + (A)n Simple_repeat Simple_repeat 1 27 0 4 652 201 179 0 51 chr3R 8909428 8909487 -18995566 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 4 652 27 49 0 0 chr3R 8911143 8911184 -18993869 + AT_rich Low_complexity Low_complexity 1 41 0 4 653 279 146 0 0 chr3R 8912904 8912959 -18992094 + (CAGT)n Simple_repeat Simple_repeat 4 58 0 4 653 26 30 0 0 chr3R 8916752 8916785 -18988268 + AT_rich Low_complexity Low_complexity 1 33 0 4 653 207 170 0 0 chr3R 8918141 8918188 -18986865 + (TCCA)n Simple_repeat Simple_repeat 1 47 0 4 653 207 69 0 0 chr3R 8918323 8918352 -18986701 + (TTTAA)n Simple_repeat Simple_repeat 4 32 0 4 653 288 137 0 0 chr3R 8920645 8920696 -18984357 + (TTGG)n Simple_repeat Simple_repeat 4 54 0 4 653 24 0 0 0 chr3R 8921271 8921295 -18983758 + AT_rich Low_complexity Low_complexity 1 24 0 4 653 22 35 0 0 chr3R 8923879 8923908 -18981145 + AT_rich Low_complexity Low_complexity 1 29 0 4 653 23 33 0 0 chr3R 8924471 8924501 -18980552 + AT_rich Low_complexity Low_complexity 1 30 0 4 653 25 65 0 0 chr3R 8927505 8927551 -18977502 + AT_rich Low_complexity Low_complexity 1 46 0 4 653 25 31 0 0 chr3R 8927739 8927771 -18977282 + AT_rich Low_complexity Low_complexity 1 32 0 4 653 25 0 0 0 chr3R 8929115 8929140 -18975913 + AT_rich Low_complexity Low_complexity 1 25 0 4 653 189 107 0 0 chr3R 8929627 8929655 -18975398 + (CCA)n Simple_repeat Simple_repeat 1 28 0 4 653 22 0 0 0 chr3R 8929757 8929779 -18975274 + AT_rich Low_complexity Low_complexity 1 22 0 4 653 292 98 0 0 chr3R 8931273 8931314 -18973739 + DNAREP1_DM LINE Penelope 1 41 -553 4 653 23 0 0 0 chr3R 8932108 8932131 -18972922 + AT_rich Low_complexity Low_complexity 1 23 0 4 653 24 0 0 0 chr3R 8932265 8932289 -18972764 + AT_rich Low_complexity Low_complexity 1 24 0 4 653 32 0 0 0 chr3R 8934325 8934357 -18970696 + AT_rich Low_complexity Low_complexity 1 32 0 4 653 180 77 0 0 chr3R 8935135 8935161 -18969892 + (TTCC)n Simple_repeat Simple_repeat 3 28 0 4 653 186 43 0 0 chr3R 8936231 8936254 -18968799 + (CCTG)n Simple_repeat Simple_repeat 1 23 0 4 653 22 35 0 0 chr3R 8937808 8937837 -18967216 + AT_rich Low_complexity Low_complexity 1 29 0 4 653 22 56 0 0 chr3R 8939016 8939052 -18966001 + AT_rich Low_complexity Low_complexity 1 36 0 4 653 223 237 25 0 chr3R 8943005 8943080 -18961973 + A-rich Low_complexity Low_complexity 1 76 0 4 653 207 69 0 0 chr3R 8943415 8943444 -18961609 + (TAAAA)n Simple_repeat Simple_repeat 4 32 0 4 653 22 56 0 0 chr3R 8946104 8946140 -18958913 + AT_rich Low_complexity Low_complexity 1 36 0 4 653 21 57 0 0 chr3R 8947925 8947960 -18957093 + AT_rich Low_complexity Low_complexity 1 35 0 4 653 304 259 11 11 chr3R 8953419 8953509 -18951544 + (CTG)n Simple_repeat Simple_repeat 3 92 0 4 653 284 196 42 67 chr3R 8953518 8953638 -18951415 - ROO_I LTR Pao -7530 726 610 4 653 233 218 0 0 chr3R 8955365 8955420 -18949633 + (CTG)n Simple_repeat Simple_repeat 1 55 0 4 653 28 0 0 0 chr3R 8956162 8956190 -18948863 + AT_rich Low_complexity Low_complexity 1 28 0 4 653 22 0 0 0 chr3R 8958128 8958150 -18946903 + AT_rich Low_complexity Low_complexity 1 22 0 4 653 19528 1 1 1 chr3R 8961602 8963722 -18941331 + POGO DNA Pogo 1 2121 0 4 653 21 0 0 0 chr3R 8963740 8963761 -18941292 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 230 207 0 33 chr3R 8964868 8964928 -18940125 + T-rich Low_complexity Low_complexity 4 61 0 4 653 23 0 0 0 chr3R 8966354 8966377 -18938676 + AT_rich Low_complexity Low_complexity 1 23 0 4 653 21 0 0 0 chr3R 8967232 8967253 -18937800 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 228 111 0 0 chr3R 8967343 8967379 -18937674 + (CCGAA)n Simple_repeat Simple_repeat 1 36 0 4 653 23 54 0 0 chr3R 8967747 8967784 -18937269 + AT_rich Low_complexity Low_complexity 1 37 0 4 653 2452 4 0 0 chr3R 8968809 8969076 -18935977 - MDG3_LTR LTR Gypsy 0 267 1 4 653 45910 0 0 0 chr3R 8969076 8974063 -18930990 - MDG3_I LTR Gypsy 0 4986 1 4 653 2452 4 0 0 chr3R 8974062 8974329 -18930724 - MDG3_LTR LTR Gypsy 0 267 1 4 653 22 0 0 0 chr3R 8974706 8974728 -18930325 + AT_rich Low_complexity Low_complexity 1 22 0 4 653 21 0 0 0 chr3R 8978258 8978279 -18926774 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 21 0 0 0 chr3R 8979582 8979603 -18925450 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 227 175 0 17 chr3R 8980552 8980610 -18924443 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 653 24 0 0 0 chr3R 8984848 8984872 -18920181 + AT_rich Low_complexity Low_complexity 1 24 0 4 653 23 0 0 0 chr3R 8990362 8990385 -18914668 + AT_rich Low_complexity Low_complexity 1 23 0 4 653 186 43 0 0 chr3R 8990872 8990895 -18914158 + (CAATT)n Simple_repeat Simple_repeat 2 24 0 4 653 25 0 0 0 chr3R 8996981 8997006 -18908047 + AT_rich Low_complexity Low_complexity 1 25 0 4 653 330 26 0 0 chr3R 8999060 8999099 -18905954 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 653 21 71 0 0 chr3R 8999470 8999512 -18905541 + AT_rich Low_complexity Low_complexity 1 42 0 4 653 246 164 0 0 chr3R 8999660 8999715 -18905338 + (TTG)n Simple_repeat Simple_repeat 3 57 0 4 653 21 36 0 0 chr3R 9001118 9001146 -18903907 + AT_rich Low_complexity Low_complexity 1 28 0 4 653 22 35 0 0 chr3R 9002697 9002726 -18902327 + AT_rich Low_complexity Low_complexity 1 29 0 4 653 21 0 0 0 chr3R 9002786 9002807 -18902246 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 249 197 0 0 chr3R 9003195 9003256 -18901797 + (CAGC)n Simple_repeat Simple_repeat 2 62 0 4 653 21 0 0 0 chr3R 9009581 9009602 -18895451 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 21 36 0 0 chr3R 9011256 9011284 -18893769 + AT_rich Low_complexity Low_complexity 1 28 0 4 653 228 167 0 0 chr3R 9018967 9019015 -18886038 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 653 25 0 0 0 chr3R 9019919 9019944 -18885109 + AT_rich Low_complexity Low_complexity 1 25 0 4 653 24 0 0 0 chr3R 9020426 9020450 -18884603 + AT_rich Low_complexity Low_complexity 1 24 0 4 653 423 0 0 0 chr3R 9027543 9027590 -18877463 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 653 246 143 0 0 chr3R 9034940 9034989 -18870064 + (CTG)n Simple_repeat Simple_repeat 1 49 0 4 653 21 95 0 0 chr3R 9035644 9035707 -18869346 + AT_rich Low_complexity Low_complexity 1 63 0 4 653 21 0 0 0 chr3R 9036241 9036262 -18868791 + AT_rich Low_complexity Low_complexity 1 21 0 4 653 27 0 0 0 chr3R 9037643 9037670 -18867383 + AT_rich Low_complexity Low_complexity 1 27 0 4 653 23 0 0 0 chr3R 9039328 9039351 -18865702 + AT_rich Low_complexity Low_complexity 1 23 0 4 653 27 87 0 0 chr3R 9041033 9041102 -18863951 + AT_rich Low_complexity Low_complexity 1 69 0 4 653 22 0 0 0 chr3R 9043267 9043289 -18861764 + AT_rich Low_complexity Low_complexity 1 22 0 4 654 22 70 0 0 chr3R 9044736 9044779 -18860274 + AT_rich Low_complexity Low_complexity 1 43 0 4 654 25 65 0 0 chr3R 9049472 9049518 -18855535 + AT_rich Low_complexity Low_complexity 1 46 0 4 654 23 0 0 0 chr3R 9049561 9049584 -18855469 + AT_rich Low_complexity Low_complexity 1 23 0 4 654 25 31 0 0 chr3R 9050661 9050693 -18854360 + AT_rich Low_complexity Low_complexity 1 32 0 4 654 34 0 0 0 chr3R 9052358 9052392 -18852661 + AT_rich Low_complexity Low_complexity 1 34 0 4 654 214 242 32 0 chr3R 9053309 9053371 -18851682 + (TTTG)n Simple_repeat Simple_repeat 4 67 0 4 654 204 279 0 0 chr3R 9056418 9056486 -18848567 + (CGAAA)n Simple_repeat Simple_repeat 3 70 0 4 654 21 36 0 0 chr3R 9057526 9057554 -18847499 + AT_rich Low_complexity Low_complexity 1 28 0 4 654 33 25 0 0 chr3R 9063615 9063655 -18841398 + AT_rich Low_complexity Low_complexity 1 40 0 4 654 231 203 0 0 chr3R 9064124 9064198 -18840855 + ROO_I LTR Pao 644 717 -7539 4 654 206 219 16 0 chr3R 9064688 9064752 -18840301 + (CAG)n Simple_repeat Simple_repeat 2 66 0 4 654 200 180 20 20 chr3R 9065991 9066042 -18839011 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 654 22 0 0 0 chr3R 9067692 9067714 -18837339 + AT_rich Low_complexity Low_complexity 1 22 0 4 654 195 42 0 0 chr3R 9067748 9067772 -18837281 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 654 183 139 0 0 chr3R 9068584 9068620 -18836433 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 654 225 65 0 0 chr3R 9072730 9072761 -18832292 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 654 27 0 0 0 chr3R 9073305 9073332 -18831721 + AT_rich Low_complexity Low_complexity 1 27 0 4 654 382 38 24 60 chr3R 9075362 9075446 -18829607 + (TTTA)n Simple_repeat Simple_repeat 2 82 0 4 654 23 68 0 0 chr3R 9075541 9075585 -18829468 + AT_rich Low_complexity Low_complexity 1 44 0 4 654 33 43 0 0 chr3R 9077098 9077145 -18827908 + AT_rich Low_complexity Low_complexity 1 47 0 4 654 24 32 0 0 chr3R 9079039 9079070 -18825983 + AT_rich Low_complexity Low_complexity 1 31 0 4 654 264 111 0 0 chr3R 9079680 9079725 -18825328 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 654 23 54 0 0 chr3R 9083396 9083433 -18821620 + AT_rich Low_complexity Low_complexity 1 37 0 4 654 33 43 0 0 chr3R 9085126 9085173 -18819880 + AT_rich Low_complexity Low_complexity 1 47 0 4 654 23 54 0 0 chr3R 9085724 9085761 -18819292 + AT_rich Low_complexity Low_complexity 1 37 0 4 654 22 80 0 0 chr3R 9087904 9087954 -18817099 + AT_rich Low_complexity Low_complexity 1 50 0 4 654 32 26 0 0 chr3R 9092463 9092502 -18812551 + AT_rich Low_complexity Low_complexity 1 39 0 4 654 216 269 0 0 chr3R 9092760 9092827 -18812226 + GA-rich Low_complexity Low_complexity 2 68 0 4 654 25 0 0 0 chr3R 9095716 9095741 -18809312 + AT_rich Low_complexity Low_complexity 1 25 0 4 654 286 244 11 22 chr3R 9098879 9098971 -18806082 + (TGGG)n Simple_repeat Simple_repeat 4 94 0 4 654 195 69 0 0 chr3R 9105020 9105049 -18800004 + (A)n Simple_repeat Simple_repeat 1 29 0 4 654 202 87 21 21 chr3R 9105313 9105360 -18799693 + (CGATA)n Simple_repeat Simple_repeat 3 49 0 4 654 22 0 0 0 chr3R 9110066 9110088 -18794965 + AT_rich Low_complexity Low_complexity 1 22 0 4 654 27 0 0 0 chr3R 9110664 9110691 -18794362 + AT_rich Low_complexity Low_complexity 1 27 0 4 654 32 57 0 0 chr3R 9113553 9113606 -18791447 + AT_rich Low_complexity Low_complexity 1 53 0 4 654 22 70 0 0 chr3R 9125419 9125462 -18779591 + AT_rich Low_complexity Low_complexity 1 43 0 4 654 206 216 0 0 chr3R 9128664 9128715 -18776338 + (CCA)n Simple_repeat Simple_repeat 3 53 0 4 654 28 61 0 0 chr3R 9131397 9131446 -18773607 + AT_rich Low_complexity Low_complexity 1 49 0 4 654 30 0 0 0 chr3R 9132034 9132064 -18772989 + AT_rich Low_complexity Low_complexity 1 30 0 4 654 21 36 0 0 chr3R 9138607 9138635 -18766418 + AT_rich Low_complexity Low_complexity 1 28 0 4 654 209 340 0 0 chr3R 9138644 9138738 -18766315 + (CCA)n Simple_repeat Simple_repeat 3 96 0 4 654 43159 3 1 2 chr3R 9139879 9144600 -18760453 - DOC LINE Jockey -6 4719 5 4 654 401 173 161 0 chr3R 9145431 9145512 -18759541 + DNAREP1_DM LINE Penelope 501 594 0 4 654 22 0 0 0 chr3R 9146701 9146723 -18758330 + AT_rich Low_complexity Low_complexity 1 22 0 4 654 22 94 0 0 chr3R 9146988 9147052 -18758001 + AT_rich Low_complexity Low_complexity 1 64 0 4 654 37 23 0 0 chr3R 9150084 9150128 -18754925 + AT_rich Low_complexity Low_complexity 1 44 0 4 654 21 0 0 0 chr3R 9151317 9151338 -18753715 + AT_rich Low_complexity Low_complexity 1 21 0 4 654 26 74 0 0 chr3R 9158216 9158270 -18746783 + AT_rich Low_complexity Low_complexity 1 54 0 4 654 23 0 0 0 chr3R 9161596 9161619 -18743434 + AT_rich Low_complexity Low_complexity 1 23 0 4 654 31 0 0 0 chr3R 9163880 9163911 -18741142 + AT_rich Low_complexity Low_complexity 1 31 0 4 654 50 0 0 0 chr3R 9165343 9165393 -18739660 + AT_rich Low_complexity Low_complexity 1 50 0 4 654 206 146 24 0 chr3R 9165825 9165866 -18739187 + (GAGTG)n Simple_repeat Simple_repeat 2 43 0 4 654 29 28 0 0 chr3R 9166617 9166653 -18738400 + AT_rich Low_complexity Low_complexity 1 36 0 4 654 195 100 0 0 chr3R 9170009 9170039 -18735014 + (TGG)n Simple_repeat Simple_repeat 1 30 0 4 654 21 0 0 0 chr3R 9172982 9173003 -18732050 + AT_rich Low_complexity Low_complexity 1 21 0 4 654 276 30 0 0 chr3R 9173299 9173332 -18731721 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 655 24 32 0 0 chr3R 9178433 9178464 -18726589 + AT_rich Low_complexity Low_complexity 1 31 0 4 655 21 95 0 0 chr3R 9182332 9182395 -18722658 + AT_rich Low_complexity Low_complexity 1 63 0 4 655 249 33 0 0 chr3R 9182845 9182875 -18722178 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 655 45 0 0 0 chr3R 9186409 9186454 -18718599 + AT_rich Low_complexity Low_complexity 1 45 0 4 655 193 89 0 43 chr3R 9187547 9187594 -18717459 + (TTTAA)n Simple_repeat Simple_repeat 3 47 0 4 655 29 47 0 0 chr3R 9189119 9189162 -18715891 + AT_rich Low_complexity Low_complexity 1 43 0 4 655 26 50 0 0 chr3R 9190301 9190341 -18714712 + AT_rich Low_complexity Low_complexity 1 40 0 4 655 236 238 0 0 chr3R 9190784 9190847 -18714206 + CT-rich Low_complexity Low_complexity 2 64 0 4 655 24 53 0 0 chr3R 9191985 9192023 -18713030 + AT_rich Low_complexity Low_complexity 1 38 0 4 655 21 0 0 0 chr3R 9195036 9195057 -18709996 + AT_rich Low_complexity Low_complexity 1 21 0 4 655 27 29 0 0 chr3R 9197253 9197287 -18707766 + AT_rich Low_complexity Low_complexity 1 34 0 4 655 26 50 0 0 chr3R 9197830 9197870 -18707183 + AT_rich Low_complexity Low_complexity 1 40 0 4 655 21 0 0 0 chr3R 9197947 9197968 -18707085 + AT_rich Low_complexity Low_complexity 1 21 0 4 655 207 69 0 0 chr3R 9198824 9198853 -18706200 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 655 26 0 0 0 chr3R 9200617 9200643 -18704410 + AT_rich Low_complexity Low_complexity 1 26 0 4 655 448 54 0 0 chr3R 9201190 9201246 -18703807 + BARI1 DNA Tc1 40 95 -1655 4 655 1577 121 12 80 chr3R 9201254 9201578 -18703475 + I_DM LINE I 952 1253 -4978 4 655 28 61 0 0 chr3R 9203194 9203243 -18701810 + AT_rich Low_complexity Low_complexity 1 49 0 4 655 22 56 0 0 chr3R 9204565 9204601 -18700452 + AT_rich Low_complexity Low_complexity 1 36 0 4 655 24 32 0 0 chr3R 9208995 9209026 -18696027 + AT_rich Low_complexity Low_complexity 1 31 0 4 655 39 0 0 0 chr3R 9210331 9210370 -18694683 + AT_rich Low_complexity Low_complexity 1 39 0 4 655 230 203 43 0 chr3R 9215259 9215328 -18689725 - ROO_I LTR Pao -7495 761 690 4 655 21 0 0 0 chr3R 9216076 9216097 -18688956 + AT_rich Low_complexity Low_complexity 1 21 0 4 655 22 0 0 0 chr3R 9216788 9216810 -18688243 + AT_rich Low_complexity Low_complexity 1 22 0 4 655 22 35 0 0 chr3R 9220557 9220586 -18684467 + AT_rich Low_complexity Low_complexity 1 29 0 4 655 267 192 0 0 chr3R 9220968 9221046 -18684007 + (TG)n Simple_repeat Simple_repeat 1 78 0 4 655 200 231 0 0 chr3R 9227035 9227074 -18677979 + (CATATA)n Simple_repeat Simple_repeat 1 39 0 4 655 22 56 0 0 chr3R 9230727 9230763 -18674290 + AT_rich Low_complexity Low_complexity 1 36 0 4 655 21 57 0 0 chr3R 9232976 9233011 -18672042 + AT_rich Low_complexity Low_complexity 1 35 0 4 655 22 56 0 0 chr3R 9235267 9235303 -18669750 + AT_rich Low_complexity Low_complexity 1 36 0 4 655 27 0 0 0 chr3R 9241778 9241805 -18663248 + AT_rich Low_complexity Low_complexity 1 27 0 4 655 32 0 0 0 chr3R 9244744 9244776 -18660277 + AT_rich Low_complexity Low_complexity 1 32 0 4 655 201 349 0 39 chr3R 9246705 9246860 -18658193 + GA-rich Low_complexity Low_complexity 2 150 0 4 655 21 0 0 0 chr3R 9247670 9247691 -18657362 + AT_rich Low_complexity Low_complexity 1 21 0 4 655 29 47 0 0 chr3R 9247710 9247753 -18657300 + AT_rich Low_complexity Low_complexity 1 43 0 4 655 21 36 0 0 chr3R 9251299 9251327 -18653726 + AT_rich Low_complexity Low_complexity 1 28 0 4 655 25 31 0 0 chr3R 9252033 9252065 -18652988 + AT_rich Low_complexity Low_complexity 1 32 0 4 655 195 114 0 0 chr3R 9253530 9253565 -18651488 + (CAA)n Simple_repeat Simple_repeat 3 37 0 4 655 225 65 0 0 chr3R 9261605 9261636 -18643417 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 655 210 71 0 0 chr3R 9262026 9262054 -18642999 + (TCCA)n Simple_repeat Simple_repeat 4 31 0 4 655 202 261 0 0 chr3R 9263149 9263195 -18641858 + (CCCCAA)n Simple_repeat Simple_repeat 5 50 0 4 655 24 32 0 0 chr3R 9264051 9264082 -18640971 + AT_rich Low_complexity Low_complexity 1 31 0 4 655 21 0 0 0 chr3R 9264105 9264126 -18640927 + AT_rich Low_complexity Low_complexity 1 21 0 4 655 27 0 0 0 chr3R 9264141 9264168 -18640885 + AT_rich Low_complexity Low_complexity 1 27 0 4 655 24 32 0 0 chr3R 9264319 9264350 -18640703 + AT_rich Low_complexity Low_complexity 1 31 0 4 655 21 0 0 0 chr3R 9268538 9268559 -18636494 + AT_rich Low_complexity Low_complexity 1 21 0 4 655 258 56 0 0 chr3R 9269157 9269193 -18635860 + (TCCA)n Simple_repeat Simple_repeat 4 39 0 4 655 22 35 0 0 chr3R 9270273 9270302 -18634751 + AT_rich Low_complexity Low_complexity 1 29 0 4 655 21 36 0 0 chr3R 9270979 9271007 -18634046 + AT_rich Low_complexity Low_complexity 1 28 0 4 655 298 265 20 0 chr3R 9276306 9276404 -18628649 + (CA)n Simple_repeat Simple_repeat 1 100 0 4 655 198 143 0 0 chr3R 9277742 9277777 -18627276 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 655 21 57 0 0 chr3R 9278574 9278609 -18626444 + AT_rich Low_complexity Low_complexity 1 35 0 4 655 25 95 0 0 chr3R 9281280 9281354 -18623699 + AT_rich Low_complexity Low_complexity 1 74 0 4 655 184 137 19 19 chr3R 9283779 9283831 -18621222 + (TTCCG)n Simple_repeat Simple_repeat 4 55 0 4 655 180 125 0 0 chr3R 9291932 9291964 -18613089 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 655 32 0 0 0 chr3R 9292762 9292794 -18612259 + AT_rich Low_complexity Low_complexity 1 32 0 4 655 22 0 0 0 chr3R 9292988 9293010 -18612043 + AT_rich Low_complexity Low_complexity 1 22 0 4 655 200 211 0 0 chr3R 9293434 9293472 -18611581 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 4 655 30 45 0 0 chr3R 9294637 9294681 -18610372 + AT_rich Low_complexity Low_complexity 1 44 0 4 655 180 0 0 0 chr3R 9295774 9295794 -18609259 + (T)n Simple_repeat Simple_repeat 1 20 0 4 655 24 0 0 0 chr3R 9297182 9297206 -18607847 + AT_rich Low_complexity Low_complexity 1 24 0 4 655 40 21 0 0 chr3R 9297344 9297391 -18607662 + AT_rich Low_complexity Low_complexity 1 47 0 4 655 189 107 0 0 chr3R 9298026 9298054 -18606999 + (CAGT)n Simple_repeat Simple_repeat 1 28 0 4 655 205 186 0 0 chr3R 9299466 9299509 -18605544 + A-rich Low_complexity Low_complexity 1 43 0 4 655 207 100 0 0 chr3R 9300009 9300039 -18605014 + (CAG)n Simple_repeat Simple_repeat 3 32 0 4 655 201 139 0 0 chr3R 9305071 9305114 -18599939 + (CTG)n Simple_repeat Simple_repeat 1 43 0 4 656 22 0 0 0 chr3R 9306702 9306724 -18598329 + AT_rich Low_complexity Low_complexity 1 22 0 4 656 237 163 0 0 chr3R 9307799 9307848 -18597205 + (CCAA)n Simple_repeat Simple_repeat 2 50 0 4 656 227 262 0 0 chr3R 9308103 9308164 -18596889 + (CAACT)n Simple_repeat Simple_repeat 1 61 0 4 656 24 32 0 0 chr3R 9308598 9308629 -18596424 + AT_rich Low_complexity Low_complexity 1 31 0 4 656 215 220 0 17 chr3R 9309858 9309918 -18595135 + (CCA)n Simple_repeat Simple_repeat 1 59 0 4 656 200 184 0 0 chr3R 9312749 9312787 -18592266 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 656 23 0 0 0 chr3R 9313370 9313393 -18591660 + AT_rich Low_complexity Low_complexity 1 23 0 4 656 219 69 0 0 chr3R 9315307 9315336 -18589717 + (CTG)n Simple_repeat Simple_repeat 1 29 0 4 656 232 200 0 0 chr3R 9316419 9316474 -18588579 + ROO_I LTR Pao 680 734 -7522 4 656 510 103 0 0 chr3R 9316744 9316822 -18588231 + (CAG)n Simple_repeat Simple_repeat 2 79 0 4 656 210 250 0 0 chr3R 9317617 9317677 -18587376 + (CAT)n Simple_repeat Simple_repeat 3 62 0 4 656 180 152 0 0 chr3R 9318970 9319003 -18586050 + (CAG)n Simple_repeat Simple_repeat 3 35 0 4 656 234 62 0 0 chr3R 9319081 9319113 -18585940 + (A)n Simple_repeat Simple_repeat 1 32 0 4 656 183 156 0 0 chr3R 9319241 9319273 -18585780 + (CAA)n Simple_repeat Simple_repeat 3 34 0 4 656 223 259 0 0 chr3R 9321351 9321405 -18583648 + (CAA)n Simple_repeat Simple_repeat 1 54 0 4 656 270 81 0 0 chr3R 9323523 9323560 -18581493 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 656 206 137 0 56 chr3R 9324299 9324353 -18580700 + (CTG)n Simple_repeat Simple_repeat 3 53 0 4 656 210 91 0 0 chr3R 9324653 9324686 -18580367 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 656 195 42 0 0 chr3R 9327696 9327720 -18577333 + (A)n Simple_repeat Simple_repeat 1 24 0 4 656 204 184 0 0 chr3R 9328467 9328516 -18576537 + (CAG)n Simple_repeat Simple_repeat 1 49 0 4 656 23 0 0 0 chr3R 9330352 9330375 -18574678 + AT_rich Low_complexity Low_complexity 1 23 0 4 656 21 0 0 0 chr3R 9330701 9330722 -18574331 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 234 81 0 0 chr3R 9332163 9332200 -18572853 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 656 25 0 0 0 chr3R 9332699 9332724 -18572329 + AT_rich Low_complexity Low_complexity 1 25 0 4 656 22 0 0 0 chr3R 9334554 9334576 -18570477 + AT_rich Low_complexity Low_complexity 1 22 0 4 656 26 64 0 0 chr3R 9334873 9334920 -18570133 + AT_rich Low_complexity Low_complexity 1 47 0 4 656 180 77 0 0 chr3R 9335915 9335941 -18569112 + (CAGGA)n Simple_repeat Simple_repeat 3 28 0 4 656 27 29 0 0 chr3R 9336136 9336170 -18568883 + AT_rich Low_complexity Low_complexity 1 34 0 4 656 234 116 0 0 chr3R 9336892 9336935 -18568118 + (A)n Simple_repeat Simple_repeat 1 43 0 4 656 246 81 0 0 chr3R 9337225 9337262 -18567791 + (TAAAA)n Simple_repeat Simple_repeat 3 39 0 4 656 205 171 0 0 chr3R 9339317 9339352 -18565701 + (CACAA)n Simple_repeat Simple_repeat 3 37 0 4 656 273 29 0 0 chr3R 9342130 9342164 -18562889 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 656 270 0 0 0 chr3R 9342719 9342749 -18562304 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 656 21 0 0 0 chr3R 9343000 9343021 -18562032 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 25453 4 0 0 chr3R 9343024 9345756 -18559297 - LINEJ1_DM LINE Jockey 0 5020 2290 4 656 204 167 0 23 chr3R 9346396 9346439 -18558614 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 656 250 253 0 0 chr3R 9346608 9346691 -18558362 + ROO_I LTR Pao 647 729 -7527 4 656 201 94 0 0 chr3R 9347107 9347139 -18557914 + (CTG)n Simple_repeat Simple_repeat 2 33 0 4 656 226 207 0 33 chr3R 9347296 9347356 -18557697 + (CATATA)n Simple_repeat Simple_repeat 4 61 0 4 656 292 244 26 9 chr3R 9347594 9347710 -18557343 + ROO_I LTR Pao 641 758 -7498 4 656 21 0 0 0 chr3R 9347784 9347805 -18557248 + AT_rich Low_complexity Low_complexity 1 21 0 4 656 198 0 0 0 chr3R 9348939 9348961 -18556092 + (CCG)n Simple_repeat Simple_repeat 1 22 0 4 656 21 57 0 0 chr3R 9349688 9349723 -18555330 + AT_rich Low_complexity Low_complexity 1 35 0 4 656 276 170 0 0 chr3R 9350174 9350227 -18554826 + (CAT)n Simple_repeat Simple_repeat 1 53 0 4 656 259 254 0 0 chr3R 9350545 9350612 -18554441 + A-rich Low_complexity Low_complexity 1 67 0 4 656 237 119 0 0 chr3R 9351093 9351135 -18553918 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 656 270 81 0 0 chr3R 9353381 9353418 -18551635 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 656 231 226 0 0 chr3R 9353881 9353934 -18551119 + T-rich Low_complexity Low_complexity 1 53 0 4 656 216 67 0 0 chr3R 9356296 9356326 -18548727 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 656 198 191 0 0 chr3R 9358125 9358172 -18546881 + T-rich Low_complexity Low_complexity 4 50 0 4 656 186 43 0 0 chr3R 9360859 9360882 -18544171 + (T)n Simple_repeat Simple_repeat 1 23 0 4 656 219 36 0 0 chr3R 9362482 9362510 -18542543 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 656 180 77 0 0 chr3R 9362972 9362998 -18542055 + (CAG)n Simple_repeat Simple_repeat 2 27 0 4 656 225 108 0 0 chr3R 9364755 9364792 -18540261 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 656 225 65 0 0 chr3R 9365342 9365373 -18539680 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 656 332 184 0 22 chr3R 9367717 9367806 -18537247 + (CGATG)n Simple_repeat Simple_repeat 4 90 0 4 656 276 100 0 0 chr3R 9368327 9368367 -18536686 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 656 229 61 18 109 chr3R 9369029 9369084 -18535969 + ROO_I LTR Pao 697 746 -7510 4 656 189 107 0 0 chr3R 9371332 9371360 -18533693 + (A)n Simple_repeat Simple_repeat 1 28 0 4 656 201 94 0 0 chr3R 9372335 9372367 -18532686 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 656 209 196 22 0 chr3R 9372560 9372606 -18532447 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 656 28 29 0 0 chr3R 9373980 9374015 -18531038 + AT_rich Low_complexity Low_complexity 1 35 0 4 656 41 48 0 0 chr3R 9374120 9374182 -18530871 + AT_rich Low_complexity Low_complexity 1 62 0 4 656 180 77 0 0 chr3R 9375168 9375194 -18529859 + (CTG)n Simple_repeat Simple_repeat 2 27 0 4 656 260 53 0 26 chr3R 9376014 9376053 -18529000 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 656 28 29 0 0 chr3R 9376203 9376238 -18528815 + AT_rich Low_complexity Low_complexity 1 35 0 4 656 201 39 0 0 chr3R 9380501 9380527 -18524526 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 656 255 177 0 0 chr3R 9380933 9380995 -18524058 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 656 210 162 0 0 chr3R 9382261 9382298 -18522755 + T-rich Low_complexity Low_complexity 1 37 0 4 656 231 88 0 0 chr3R 9382491 9382525 -18522528 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 656 187 156 0 45 chr3R 9383423 9383490 -18521563 + (CCCA)n Simple_repeat Simple_repeat 2 65 0 4 656 257 109 0 21 chr3R 9383795 9383842 -18521211 + (TTG)n Simple_repeat Simple_repeat 1 46 0 4 656 211 234 0 0 chr3R 9384201 9384248 -18520805 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 4 656 24 32 0 0 chr3R 9386393 9386424 -18518629 + AT_rich Low_complexity Low_complexity 1 31 0 4 656 226 250 0 0 chr3R 9387680 9387736 -18517317 + T-rich Low_complexity Low_complexity 1 56 0 4 656 246 284 0 33 chr3R 9387818 9387909 -18517144 + (CAA)n Simple_repeat Simple_repeat 2 89 0 4 656 204 40 0 0 chr3R 9389768 9389793 -18515260 + (CCCCG)n Simple_repeat Simple_repeat 3 27 0 4 656 189 147 0 0 chr3R 9389903 9389937 -18515116 + (GCTG)n Simple_repeat Simple_repeat 3 36 0 4 656 264 226 16 0 chr3R 9389942 9390004 -18515049 + (CTG)n Simple_repeat Simple_repeat 1 63 0 4 656 24 32 0 0 chr3R 9390286 9390317 -18514736 + AT_rich Low_complexity Low_complexity 1 31 0 4 656 21 36 0 0 chr3R 9393029 9393057 -18511996 + AT_rich Low_complexity Low_complexity 1 28 0 4 656 39 84 0 0 chr3R 9393747 9393842 -18511211 + AT_rich Low_complexity Low_complexity 1 95 0 4 656 219 157 0 0 chr3R 9394231 9394282 -18510771 + (ACTG)n Simple_repeat Simple_repeat 4 54 0 4 656 207 0 0 0 chr3R 9395020 9395043 -18510010 + (A)n Simple_repeat Simple_repeat 1 23 0 4 656 237 108 0 0 chr3R 9396451 9396488 -18508565 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 4 656 201 74 0 0 chr3R 9397921 9397948 -18507105 + (TCCA)n Simple_repeat Simple_repeat 4 30 0 4 656 236 209 44 15 chr3R 9397985 9398053 -18507000 + (TCCA)n Simple_repeat Simple_repeat 2 71 0 4 656 23 0 0 0 chr3R 9399639 9399662 -18505391 + AT_rich Low_complexity Low_complexity 1 23 0 4 656 180 217 0 0 chr3R 9400339 9400385 -18504668 + (TTCG)n Simple_repeat Simple_repeat 4 49 0 4 656 288 303 22 15 chr3R 9400591 9400725 -18504328 + (CAA)n Simple_repeat Simple_repeat 2 136 0 4 656 207 88 0 0 chr3R 9402663 9402697 -18502356 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 656 192 77 0 0 chr3R 9402977 9403003 -18502050 + (TCCTG)n Simple_repeat Simple_repeat 2 27 0 4 656 251 238 12 12 chr3R 9404892 9404973 -18500080 + (GTTTG)n Simple_repeat Simple_repeat 4 84 0 4 656 192 125 0 0 chr3R 9405179 9405211 -18499842 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 656 197 180 20 0 chr3R 9406760 9406810 -18498243 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 656 180 125 0 0 chr3R 9407232 9407264 -18497789 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 656 210 118 0 0 chr3R 9408722 9408756 -18496297 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 656 303 49 0 0 chr3R 9410471 9410512 -18494541 + (GTTTG)n Simple_repeat Simple_repeat 4 44 0 4 656 255 300 0 0 chr3R 9411601 9411671 -18493382 + (CCCGAA)n Simple_repeat Simple_repeat 5 74 0 4 656 27 49 0 0 chr3R 9411983 9412024 -18493029 + AT_rich Low_complexity Low_complexity 1 41 0 4 656 33 0 0 0 chr3R 9413683 9413716 -18491337 + AT_rich Low_complexity Low_complexity 1 33 0 4 656 249 119 0 0 chr3R 9416069 9416111 -18488942 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 656 24 53 0 0 chr3R 9416774 9416812 -18488241 + AT_rich Low_complexity Low_complexity 1 38 0 4 656 22 80 0 0 chr3R 9418379 9418429 -18486624 + AT_rich Low_complexity Low_complexity 1 50 0 4 656 23 0 0 0 chr3R 9418761 9418784 -18486269 + AT_rich Low_complexity Low_complexity 1 23 0 4 656 186 133 0 0 chr3R 9419588 9419618 -18485435 + (T)n Simple_repeat Simple_repeat 1 30 0 4 656 59 38 0 0 chr3R 9420133 9420213 -18484840 + AT_rich Low_complexity Low_complexity 1 80 0 4 656 261 57 0 0 chr3R 9420591 9420626 -18484427 + (TC)n Simple_repeat Simple_repeat 1 35 0 4 656 253 237 20 88 chr3R 9422523 9422625 -18482428 - ROO_I LTR Pao -7487 769 675 4 656 24 32 0 0 chr3R 9423474 9423505 -18481548 + AT_rich Low_complexity Low_complexity 1 31 0 4 656 24 0 0 0 chr3R 9426363 9426387 -18478666 + AT_rich Low_complexity Low_complexity 1 24 0 4 656 22 0 0 0 chr3R 9429931 9429953 -18475100 + AT_rich Low_complexity Low_complexity 1 22 0 4 656 24 0 0 0 chr3R 9430528 9430552 -18474501 + AT_rich Low_complexity Low_complexity 1 24 0 4 656 219 36 0 0 chr3R 9430948 9430976 -18474077 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 656 25 31 0 0 chr3R 9431769 9431801 -18473252 + AT_rich Low_complexity Low_complexity 1 32 0 4 656 249 182 0 0 chr3R 9431980 9432035 -18473018 + (CGGA)n Simple_repeat Simple_repeat 3 57 0 4 656 23 68 0 0 chr3R 9432578 9432622 -18472431 + AT_rich Low_complexity Low_complexity 1 44 0 4 656 203 184 0 0 chr3R 9433067 9433105 -18471948 + T-rich Low_complexity Low_complexity 1 38 0 4 656 21 36 0 0 chr3R 9434121 9434149 -18470904 + AT_rich Low_complexity Low_complexity 1 28 0 4 656 23 0 0 0 chr3R 9436616 9436639 -18468414 + AT_rich Low_complexity Low_complexity 1 23 0 4 657 23 33 0 0 chr3R 9439168 9439198 -18465855 + AT_rich Low_complexity Low_complexity 1 30 0 4 657 201 278 0 40 chr3R 9440573 9440648 -18464405 + (CAAG)n Simple_repeat Simple_repeat 2 73 0 4 657 23 0 0 0 chr3R 9441228 9441251 -18463802 + AT_rich Low_complexity Low_complexity 1 23 0 4 657 285 29 0 0 chr3R 9441528 9441562 -18463491 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 4 657 183 42 0 0 chr3R 9443025 9443049 -18462004 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 657 26 0 0 0 chr3R 9443677 9443703 -18461350 + AT_rich Low_complexity Low_complexity 1 26 0 4 657 231 152 0 0 chr3R 9444490 9444536 -18460517 + (TA)n Simple_repeat Simple_repeat 1 46 0 4 657 200 111 28 0 chr3R 9445343 9445379 -18459674 + (CTG)n Simple_repeat Simple_repeat 3 39 0 4 657 21 36 0 0 chr3R 9445843 9445871 -18459182 + AT_rich Low_complexity Low_complexity 1 28 0 4 657 182 62 31 0 chr3R 9448458 9448490 -18456563 + (CATTC)n Simple_repeat Simple_repeat 1 33 0 4 657 219 69 0 0 chr3R 9450506 9450535 -18454518 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 657 320 282 0 0 chr3R 9451037 9451168 -18453885 + CT-rich Low_complexity Low_complexity 2 132 0 4 657 186 43 0 0 chr3R 9452135 9452158 -18452895 + (CAGC)n Simple_repeat Simple_repeat 3 25 0 4 657 22 0 0 0 chr3R 9452227 9452249 -18452804 + AT_rich Low_complexity Low_complexity 1 22 0 4 657 201 147 0 0 chr3R 9452895 9452929 -18452124 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 657 216 97 0 0 chr3R 9453145 9453176 -18451877 + (TTCCC)n Simple_repeat Simple_repeat 3 33 0 4 657 225 0 0 0 chr3R 9454359 9454384 -18450669 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 657 189 0 0 0 chr3R 9455180 9455201 -18449852 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 657 183 42 0 0 chr3R 9455337 9455361 -18449692 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 657 24 67 0 0 chr3R 9455580 9455625 -18449428 + AT_rich Low_complexity Low_complexity 1 45 0 4 657 222 152 43 0 chr3R 9460967 9461013 -18444040 + (TATG)n Simple_repeat Simple_repeat 3 50 0 4 657 201 184 0 20 chr3R 9461361 9461411 -18443642 + T-rich Low_complexity Low_complexity 2 50 0 4 657 227 93 23 0 chr3R 9461611 9461654 -18443399 + (TTGG)n Simple_repeat Simple_repeat 2 45 0 4 657 222 140 0 57 chr3R 9461740 9461793 -18443260 + T-rich Low_complexity Low_complexity 5 54 0 4 657 316 314 0 0 chr3R 9462699 9462801 -18442252 + (CCG)n Simple_repeat Simple_repeat 2 103 0 4 657 229 216 0 0 chr3R 9463421 9463472 -18441581 + T-rich Low_complexity Low_complexity 1 51 0 4 657 23 0 0 0 chr3R 9463683 9463706 -18441347 + AT_rich Low_complexity Low_complexity 1 23 0 4 657 28 48 0 0 chr3R 9465375 9465417 -18439636 + AT_rich Low_complexity Low_complexity 1 42 0 4 657 234 91 0 0 chr3R 9465852 9465885 -18439168 + (T)n Simple_repeat Simple_repeat 1 33 0 4 657 22 70 0 0 chr3R 9466376 9466419 -18438634 + AT_rich Low_complexity Low_complexity 1 43 0 4 657 215 197 16 16 chr3R 9466500 9466562 -18438491 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 657 225 83 0 0 chr3R 9467015 9467051 -18438002 + (TTG)n Simple_repeat Simple_repeat 2 37 0 4 657 219 103 0 0 chr3R 9467552 9467591 -18437462 + (TTG)n Simple_repeat Simple_repeat 2 40 0 4 657 243 103 0 0 chr3R 9467651 9467690 -18437363 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 657 36 0 0 0 chr3R 9469517 9469553 -18435500 + AT_rich Low_complexity Low_complexity 1 36 0 4 657 44 46 0 0 chr3R 9472154 9472219 -18432834 + AT_rich Low_complexity Low_complexity 1 65 0 4 657 27 62 0 0 chr3R 9472326 9472374 -18432679 + AT_rich Low_complexity Low_complexity 1 48 0 4 657 223 196 18 0 chr3R 9472973 9473029 -18432024 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 657 249 194 0 88 chr3R 9475697 9475799 -18429254 + ROO_I LTR Pao 636 728 -7528 4 657 296 105 0 34 chr3R 9476001 9476060 -18428993 + (CAG)n Simple_repeat Simple_repeat 3 59 0 4 657 236 230 9 65 chr3R 9477297 9477404 -18427649 + ROO_I LTR Pao 640 740 -7516 4 657 183 162 0 0 chr3R 9478135 9478172 -18426881 + A-rich Low_complexity Low_complexity 1 37 0 4 657 25 31 0 0 chr3R 9478213 9478245 -18426808 + AT_rich Low_complexity Low_complexity 1 32 0 4 657 229 182 0 0 chr3R 9478534 9478578 -18426475 + (TTCGG)n Simple_repeat Simple_repeat 1 44 0 4 657 228 86 0 0 chr3R 9479058 9479093 -18425960 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 657 22 0 0 0 chr3R 9479684 9479706 -18425347 + AT_rich Low_complexity Low_complexity 1 22 0 4 657 33 0 0 0 chr3R 9480463 9480496 -18424557 + AT_rich Low_complexity Low_complexity 1 33 0 4 657 21 36 0 0 chr3R 9483520 9483548 -18421505 + AT_rich Low_complexity Low_complexity 1 28 0 4 657 216 296 0 0 chr3R 9484473 9484581 -18420472 + (CCG)n Simple_repeat Simple_repeat 2 109 0 4 657 268 373 0 0 chr3R 9484627 9484788 -18420265 + (CCG)n Simple_repeat Simple_repeat 2 162 0 4 657 21 57 0 0 chr3R 9485408 9485443 -18419610 + AT_rich Low_complexity Low_complexity 1 35 0 4 657 21 0 0 0 chr3R 9485466 9485487 -18419566 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 31 88 0 0 chr3R 9485517 9485597 -18419456 + AT_rich Low_complexity Low_complexity 1 80 0 4 657 22 0 0 0 chr3R 9485749 9485771 -18419282 + AT_rich Low_complexity Low_complexity 1 22 0 4 657 270 0 0 0 chr3R 9496556 9496586 -18408467 + (A)n Simple_repeat Simple_repeat 1 30 0 4 657 225 0 0 0 chr3R 9497523 9497548 -18407505 + (TAA)n Simple_repeat Simple_repeat 3 27 0 4 657 207 69 0 0 chr3R 9498450 9498479 -18406574 + (TGG)n Simple_repeat Simple_repeat 1 29 0 4 657 246 62 0 0 chr3R 9499052 9499084 -18405969 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 657 339 105 0 0 chr3R 9499381 9499438 -18405615 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 657 248 53 26 0 chr3R 9499580 9499618 -18405435 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 657 24 0 0 0 chr3R 9500814 9500838 -18404215 + AT_rich Low_complexity Low_complexity 1 24 0 4 657 195 167 0 0 chr3R 9504901 9504943 -18400110 + (CAG)n Simple_repeat Simple_repeat 2 43 0 4 657 232 240 0 0 chr3R 9509906 9509956 -18395097 + CT-rich Low_complexity Low_complexity 2 51 0 4 657 24 0 0 0 chr3R 9511771 9511795 -18393258 + AT_rich Low_complexity Low_complexity 1 24 0 4 657 22 0 0 0 chr3R 9513006 9513028 -18392025 + AT_rich Low_complexity Low_complexity 1 22 0 4 657 216 111 0 0 chr3R 9516483 9516519 -18388534 + (CAG)n Simple_repeat Simple_repeat 1 36 0 4 657 265 277 0 0 chr3R 9516645 9516728 -18388325 + (TCG)n Simple_repeat Simple_repeat 2 84 0 4 657 21 57 0 0 chr3R 9517664 9517699 -18387354 + AT_rich Low_complexity Low_complexity 1 35 0 4 657 204 163 0 0 chr3R 9517763 9517806 -18387247 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 657 21 0 0 0 chr3R 9518347 9518368 -18386685 + AT_rich Low_complexity Low_complexity 1 21 0 4 657 186 43 0 0 chr3R 9518973 9518996 -18386057 + (CAATC)n Simple_repeat Simple_repeat 5 27 0 4 657 193 146 20 20 chr3R 9519303 9519352 -18385701 + A-rich Low_complexity Low_complexity 5 53 0 4 657 22 80 0 0 chr3R 9519554 9519604 -18385449 + AT_rich Low_complexity Low_complexity 1 50 0 4 657 32 26 0 0 chr3R 9530608 9530647 -18374406 + AT_rich Low_complexity Low_complexity 1 39 0 4 657 36 40 0 0 chr3R 9531713 9531763 -18373290 + AT_rich Low_complexity Low_complexity 1 50 0 4 657 192 111 0 0 chr3R 9532234 9532270 -18372783 + (A)n Simple_repeat Simple_repeat 1 36 0 4 657 26 50 0 0 chr3R 9536754 9536794 -18368259 + AT_rich Low_complexity Low_complexity 1 40 0 4 657 1760 66 76 10 chr3R 9537852 9538142 -18366911 + S_DM DNA Tc1 1 309 -1427 4 657 186 118 0 0 chr3R 9538142 9538176 -18366877 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 657 195 42 0 0 chr3R 9538819 9538843 -18366210 + (CAA)n Simple_repeat Simple_repeat 1 24 0 4 657 32 0 0 0 chr3R 9539504 9539536 -18365517 + AT_rich Low_complexity Low_complexity 1 32 0 4 657 192 97 0 0 chr3R 9541020 9541051 -18364002 + (CAA)n Simple_repeat Simple_repeat 3 33 0 4 657 200 241 0 18 chr3R 9541968 9542023 -18363030 + T-rich Low_complexity Low_complexity 3 56 0 4 657 226 152 0 33 chr3R 9542606 9542667 -18362386 + (CAA)n Simple_repeat Simple_repeat 1 59 0 4 657 27 49 0 0 chr3R 9546380 9546421 -18358632 + AT_rich Low_complexity Low_complexity 1 41 0 4 657 188 203 31 0 chr3R 9546799 9546863 -18358190 + A-rich Low_complexity Low_complexity 4 69 0 4 657 25 0 0 0 chr3R 9547152 9547177 -18357876 + AT_rich Low_complexity Low_complexity 1 25 0 4 657 201 215 15 15 chr3R 9548141 9548207 -18356846 + T-rich Low_complexity Low_complexity 4 69 0 4 657 267 93 0 0 chr3R 9551775 9551818 -18353235 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 4 657 25 0 0 0 chr3R 9553475 9553500 -18351553 + AT_rich Low_complexity Low_complexity 1 25 0 4 657 210 224 0 0 chr3R 9554654 9554703 -18350350 + (CAGAGA)n Simple_repeat Simple_repeat 2 50 0 4 657 205 191 0 0 chr3R 9555915 9555957 -18349096 + A-rich Low_complexity Low_complexity 2 43 0 4 657 186 43 0 0 chr3R 9556896 9556919 -18348134 + (CTG)n Simple_repeat Simple_repeat 3 25 0 4 657 228 35 0 0 chr3R 9557856 9557885 -18347168 + (GCTG)n Simple_repeat Simple_repeat 4 32 0 4 657 439 190 473 0 chr3R 9559615 9559758 -18345295 + DNAREP1_DM LINE Penelope 383 593 -1 4 657 234 135 0 0 chr3R 9560318 9560355 -18344698 - TIRANT_I LTR Gypsy -5288 2404 2368 4 657 26 0 0 0 chr3R 9560948 9560974 -18344079 + AT_rich Low_complexity Low_complexity 1 26 0 4 657 25 51 0 0 chr3R 9561906 9561945 -18343108 + AT_rich Low_complexity Low_complexity 1 39 0 4 657 180 0 0 0 chr3R 9562300 9562320 -18342733 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 657 231 36 0 0 chr3R 9565271 9565299 -18339754 + (GA)n Simple_repeat Simple_repeat 2 29 0 4 657 186 167 0 0 chr3R 9565967 9566003 -18339050 + (ATG)n Simple_repeat Simple_repeat 1 36 0 4 657 189 74 0 0 chr3R 9568159 9568186 -18336867 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 658 249 33 0 0 chr3R 9569040 9569070 -18335983 + (CAGC)n Simple_repeat Simple_repeat 4 33 0 4 658 321 135 0 0 chr3R 9571978 9572030 -18333023 + (CAG)n Simple_repeat Simple_repeat 1 52 0 4 658 252 122 0 0 chr3R 9572094 9572135 -18332918 + (CAG)n Simple_repeat Simple_repeat 3 43 0 4 658 362 191 43 0 chr3R 9572172 9572266 -18332787 + ROO_I LTR Pao 640 737 -7519 4 658 274 236 0 0 chr3R 9573102 9573174 -18331879 + ROO_I LTR Pao 670 741 -7515 4 658 233 163 0 20 chr3R 9576711 9576761 -18328292 + T-rich Low_complexity Low_complexity 4 52 0 4 658 216 319 0 0 chr3R 9578022 9578094 -18326959 + (CAA)n Simple_repeat Simple_repeat 1 72 0 4 658 200 184 0 0 chr3R 9578312 9578350 -18326703 + GA-rich Low_complexity Low_complexity 2 39 0 4 658 228 127 55 0 chr3R 9581567 9581622 -18323431 + (TTG)n Simple_repeat Simple_repeat 2 59 0 4 658 24 32 0 0 chr3R 9583242 9583273 -18321780 + AT_rich Low_complexity Low_complexity 1 31 0 4 658 25 0 0 0 chr3R 9583808 9583833 -18321220 + AT_rich Low_complexity Low_complexity 1 25 0 4 658 27 49 0 0 chr3R 9585766 9585807 -18319246 + AT_rich Low_complexity Low_complexity 1 41 0 4 658 209 217 0 0 chr3R 9587360 9587406 -18317647 + A-rich Low_complexity Low_complexity 1 46 0 4 658 285 145 0 0 chr3R 9587414 9587476 -18317577 + (CAA)n Simple_repeat Simple_repeat 1 62 0 4 658 21 36 0 0 chr3R 9587951 9587979 -18317074 + AT_rich Low_complexity Low_complexity 1 28 0 4 658 213 94 0 0 chr3R 9590102 9590134 -18314919 + (TA)n Simple_repeat Simple_repeat 1 32 0 4 658 255 157 0 0 chr3R 9590251 9590302 -18314751 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 658 31 0 0 0 chr3R 9590971 9591002 -18314051 + AT_rich Low_complexity Low_complexity 1 31 0 4 658 210 105 0 0 chr3R 9592646 9592684 -18312369 + (CCA)n Simple_repeat Simple_repeat 1 38 0 4 658 33 56 0 0 chr3R 9595546 9595600 -18309453 + AT_rich Low_complexity Low_complexity 1 54 0 4 658 25 51 0 0 chr3R 9598600 9598639 -18306414 + AT_rich Low_complexity Low_complexity 1 39 0 4 658 21 0 0 0 chr3R 9599986 9600007 -18305046 + AT_rich Low_complexity Low_complexity 1 21 0 4 658 215 373 7 7 chr3R 9600217 9600352 -18304701 + (CGA)n Simple_repeat Simple_repeat 1 135 0 4 658 24 0 0 0 chr3R 9600919 9600943 -18304110 + AT_rich Low_complexity Low_complexity 1 24 0 4 658 213 94 0 0 chr3R 9601397 9601429 -18303624 + (ATG)n Simple_repeat Simple_repeat 3 34 0 4 658 31 0 0 0 chr3R 9601924 9601955 -18303098 + AT_rich Low_complexity Low_complexity 1 31 0 4 658 23 54 0 0 chr3R 9602298 9602335 -18302718 + AT_rich Low_complexity Low_complexity 1 37 0 4 658 231 36 0 0 chr3R 9612894 9612922 -18292131 + (CTG)n Simple_repeat Simple_repeat 2 29 0 4 658 205 171 0 0 chr3R 9612942 9612977 -18292076 + (CAG)n Simple_repeat Simple_repeat 3 37 0 4 658 240 149 0 0 chr3R 9613051 9613098 -18291955 + (CAG)n Simple_repeat Simple_repeat 1 47 0 4 658 276 137 0 0 chr3R 9613463 9613514 -18291539 + (CAG)n Simple_repeat Simple_repeat 2 52 0 4 658 47 53 0 0 chr3R 9614001 9614076 -18290977 + AT_rich Low_complexity Low_complexity 1 75 0 4 658 221 154 0 0 chr3R 9616008 9616047 -18289006 + (CTG)n Simple_repeat Simple_repeat 1 39 0 4 658 266 106 0 21 chr3R 9616205 9616253 -18288800 + (GCTTG)n Simple_repeat Simple_repeat 2 48 0 4 658 34 24 0 0 chr3R 9617723 9617764 -18287289 + AT_rich Low_complexity Low_complexity 1 41 0 4 658 254 349 8 15 chr3R 9618163 9618297 -18286756 + (CAGAGA)n Simple_repeat Simple_repeat 3 135 0 4 658 36 77 0 0 chr3R 9618565 9618643 -18286410 + AT_rich Low_complexity Low_complexity 1 78 0 4 658 228 122 0 0 chr3R 9618988 9619029 -18286024 + (CAGT)n Simple_repeat Simple_repeat 3 43 0 4 658 210 71 0 0 chr3R 9619409 9619437 -18285616 + (ATG)n Simple_repeat Simple_repeat 3 30 0 4 658 180 0 0 0 chr3R 9619646 9619666 -18285387 + (CATCC)n Simple_repeat Simple_repeat 5 24 0 4 658 288 0 0 0 chr3R 9620534 9620566 -18284487 + (GA)n Simple_repeat Simple_repeat 2 33 0 4 658 230 95 24 0 chr3R 9620714 9620756 -18284297 + (TC)n Simple_repeat Simple_repeat 1 43 0 4 658 213 185 18 18 chr3R 9622559 9622614 -18282439 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 658 234 129 32 16 chr3R 9622726 9622789 -18282264 + (CAA)n Simple_repeat Simple_repeat 3 66 0 4 658 201 94 0 0 chr3R 9622924 9622956 -18282097 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 658 213 203 0 63 chr3R 9623541 9623604 -18281449 + (CAG)n Simple_repeat Simple_repeat 1 59 0 4 658 25 31 0 0 chr3R 9623836 9623868 -18281185 + AT_rich Low_complexity Low_complexity 1 32 0 4 658 33 43 0 0 chr3R 9625507 9625554 -18279499 + AT_rich Low_complexity Low_complexity 1 47 0 4 658 26 0 0 0 chr3R 9626339 9626365 -18278688 + AT_rich Low_complexity Low_complexity 1 26 0 4 658 186 71 0 0 chr3R 9626750 9626778 -18278275 + (A)n Simple_repeat Simple_repeat 1 28 0 4 658 32 0 0 0 chr3R 9629746 9629778 -18275275 + AT_rich Low_complexity Low_complexity 1 32 0 4 658 25 0 0 0 chr3R 9629893 9629918 -18275135 + AT_rich Low_complexity Low_complexity 1 25 0 4 658 221 0 0 33 chr3R 9629918 9629948 -18275105 + (TTA)n Simple_repeat Simple_repeat 3 31 0 4 658 206 143 0 20 chr3R 9638560 9638610 -18266443 + GA-rich Low_complexity Low_complexity 2 50 0 4 658 31 44 0 0 chr3R 9639913 9639958 -18265095 + AT_rich Low_complexity Low_complexity 1 45 0 4 658 222 37 0 0 chr3R 9640491 9640518 -18264535 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 658 21 0 0 0 chr3R 9641531 9641552 -18263501 + AT_rich Low_complexity Low_complexity 1 21 0 4 658 204 184 0 0 chr3R 9642034 9642083 -18262970 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 658 212 175 0 0 chr3R 9645822 9645862 -18259191 + T-rich Low_complexity Low_complexity 1 40 0 4 658 186 143 0 0 chr3R 9646463 9646498 -18258555 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 658 222 136 0 0 chr3R 9646597 9646641 -18258412 + (T)n Simple_repeat Simple_repeat 1 44 0 4 658 35 54 0 0 chr3R 9647615 9647671 -18257382 + AT_rich Low_complexity Low_complexity 1 56 0 4 658 192 179 0 0 chr3R 9648292 9648331 -18256722 + (CAA)n Simple_repeat Simple_repeat 2 40 0 4 658 204 125 0 0 chr3R 9650250 9650282 -18254771 + (CAATC)n Simple_repeat Simple_repeat 3 34 0 4 658 201 234 0 0 chr3R 9650629 9650676 -18254377 + (GCTTG)n Simple_repeat Simple_repeat 3 49 0 4 658 30 45 0 0 chr3R 9650967 9651011 -18254042 + AT_rich Low_complexity Low_complexity 1 44 0 4 658 32 26 0 0 chr3R 9651574 9651613 -18253440 + AT_rich Low_complexity Low_complexity 1 39 0 4 658 24 0 0 0 chr3R 9652441 9652465 -18252588 + AT_rich Low_complexity Low_complexity 1 24 0 4 658 231 36 0 0 chr3R 9652585 9652613 -18252440 + (TAAAAA)n Simple_repeat Simple_repeat 3 30 0 4 658 288 91 0 0 chr3R 9655863 9655907 -18249146 + (AAATG)n Simple_repeat Simple_repeat 1 44 0 4 658 23 33 0 0 chr3R 9657609 9657639 -18247414 + AT_rich Low_complexity Low_complexity 1 30 0 4 658 21 36 0 0 chr3R 9657809 9657837 -18247216 + AT_rich Low_complexity Low_complexity 1 28 0 4 658 23 0 0 0 chr3R 9659894 9659917 -18245136 + AT_rich Low_complexity Low_complexity 1 23 0 4 658 22 0 0 0 chr3R 9660208 9660230 -18244823 + AT_rich Low_complexity Low_complexity 1 22 0 4 658 22 35 0 0 chr3R 9660281 9660310 -18244743 + AT_rich Low_complexity Low_complexity 1 29 0 4 658 21 36 0 0 chr3R 9663975 9664003 -18241050 + AT_rich Low_complexity Low_complexity 1 28 0 4 658 329 47 62 0 chr3R 9664046 9664110 -18240943 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 658 29 0 0 0 chr3R 9664238 9664267 -18240786 + AT_rich Low_complexity Low_complexity 1 29 0 4 658 27 0 0 0 chr3R 9665749 9665776 -18239277 + AT_rich Low_complexity Low_complexity 1 27 0 4 658 210 71 0 0 chr3R 9667839 9667867 -18237186 + (CAT)n Simple_repeat Simple_repeat 1 28 0 4 658 25 0 0 0 chr3R 9668586 9668611 -18236442 + AT_rich Low_complexity Low_complexity 1 25 0 4 658 205 152 0 0 chr3R 9669056 9669089 -18235964 + (CATCC)n Simple_repeat Simple_repeat 2 34 0 4 658 33 90 0 0 chr3R 9669546 9669635 -18235418 + AT_rich Low_complexity Low_complexity 1 89 0 4 658 225 119 0 0 chr3R 9670077 9670119 -18234934 + (AGTTG)n Simple_repeat Simple_repeat 2 43 0 4 658 25 51 0 0 chr3R 9670999 9671038 -18234015 + AT_rich Low_complexity Low_complexity 1 39 0 4 658 22 56 0 0 chr3R 9671775 9671811 -18233242 + AT_rich Low_complexity Low_complexity 1 36 0 4 658 260 296 11 0 chr3R 9672112 9672200 -18232853 + (TTG)n Simple_repeat Simple_repeat 1 89 0 4 658 23 0 0 0 chr3R 9673228 9673251 -18231802 + AT_rich Low_complexity Low_complexity 1 23 0 4 658 228 210 0 0 chr3R 9673323 9673404 -18231649 + (ACTG)n Simple_repeat Simple_repeat 3 83 0 4 658 24 53 0 0 chr3R 9674066 9674104 -18230949 + AT_rich Low_complexity Low_complexity 1 38 0 4 658 48 60 0 0 chr3R 9674115 9674198 -18230855 + AT_rich Low_complexity Low_complexity 1 83 0 4 658 198 0 0 0 chr3R 9674938 9674960 -18230093 + (A)n Simple_repeat Simple_repeat 1 22 0 4 658 28 29 0 0 chr3R 9678649 9678684 -18226369 + AT_rich Low_complexity Low_complexity 1 35 0 4 658 203 133 0 0 chr3R 9683819 9683849 -18221204 + (CAT)n Simple_repeat Simple_repeat 3 32 0 4 658 31 0 0 0 chr3R 9688242 9688273 -18216780 + AT_rich Low_complexity Low_complexity 1 31 0 4 658 245 180 20 0 chr3R 9691360 9691410 -18213643 + (CTG)n Simple_repeat Simple_repeat 3 53 0 4 658 21 71 0 0 chr3R 9692479 9692521 -18212532 + AT_rich Low_complexity Low_complexity 1 42 0 4 658 318 87 0 0 chr3R 9693247 9693293 -18211760 + (TCTCCC)n Simple_repeat Simple_repeat 1 46 0 4 658 382 120 0 32 chr3R 9693302 9693397 -18211656 + (CTG)n Simple_repeat Simple_repeat 3 94 0 4 658 202 338 0 0 chr3R 9693634 9693702 -18211351 + (CCG)n Simple_repeat Simple_repeat 2 69 0 4 658 25 51 0 0 chr3R 9698863 9698902 -18206151 + AT_rich Low_complexity Low_complexity 1 39 0 4 658 198 103 0 0 chr3R 9699242 9699271 -18205782 + (CTG)n Simple_repeat Simple_repeat 1 29 0 4 659 207 114 0 0 chr3R 9701049 9701084 -18203969 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 659 30 27 0 0 chr3R 9701259 9701296 -18203757 + AT_rich Low_complexity Low_complexity 1 37 0 4 659 35 0 0 0 chr3R 9704943 9704978 -18200075 + AT_rich Low_complexity Low_complexity 1 35 0 4 659 46 19 0 0 chr3R 9705907 9705960 -18199093 + AT_rich Low_complexity Low_complexity 1 53 0 4 659 217 267 0 0 chr3R 9712814 9712874 -18192179 + G-rich Low_complexity Low_complexity 2 61 0 4 659 32 26 0 0 chr3R 9714823 9714862 -18190191 + AT_rich Low_complexity Low_complexity 1 39 0 4 659 26 0 0 0 chr3R 9715273 9715299 -18189754 + AT_rich Low_complexity Low_complexity 1 26 0 4 659 204 40 0 0 chr3R 9718535 9718560 -18186493 + (TCTCG)n Simple_repeat Simple_repeat 5 29 0 4 659 29 28 0 0 chr3R 9721154 9721190 -18183863 + AT_rich Low_complexity Low_complexity 1 36 0 4 659 21 0 0 0 chr3R 9722411 9722432 -18182621 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 42 20 0 0 chr3R 9725993 9726042 -18179011 + AT_rich Low_complexity Low_complexity 1 49 0 4 659 36 40 0 0 chr3R 9726847 9726897 -18178156 + AT_rich Low_complexity Low_complexity 1 50 0 4 659 21 0 0 0 chr3R 9730414 9730435 -18174618 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 28 79 0 0 chr3R 9733556 9733619 -18171434 + AT_rich Low_complexity Low_complexity 1 63 0 4 659 231 36 0 0 chr3R 9737221 9737249 -18167804 + (CGAGT)n Simple_repeat Simple_repeat 2 29 0 4 659 21 0 0 0 chr3R 9741516 9741537 -18163516 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 21 71 0 0 chr3R 9743923 9743965 -18161088 + AT_rich Low_complexity Low_complexity 1 42 0 4 659 243 0 0 0 chr3R 9744803 9744830 -18160223 + (TAG)n Simple_repeat Simple_repeat 3 29 0 4 659 21 0 0 0 chr3R 9746066 9746087 -18158966 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 180 0 0 0 chr3R 9747867 9747887 -18157166 + (TTG)n Simple_repeat Simple_repeat 1 20 0 4 659 21 71 0 0 chr3R 9748582 9748624 -18156429 + AT_rich Low_complexity Low_complexity 1 42 0 4 659 189 0 0 0 chr3R 9749220 9749241 -18155812 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 659 24 53 0 0 chr3R 9749799 9749837 -18155216 + AT_rich Low_complexity Low_complexity 1 38 0 4 659 24 0 0 0 chr3R 9749870 9749894 -18155159 + AT_rich Low_complexity Low_complexity 1 24 0 4 659 23 68 0 0 chr3R 9750637 9750681 -18154372 + AT_rich Low_complexity Low_complexity 1 44 0 4 659 35 0 0 0 chr3R 9753056 9753091 -18151962 + AT_rich Low_complexity Low_complexity 1 35 0 4 659 24 0 0 0 chr3R 9754224 9754248 -18150805 + AT_rich Low_complexity Low_complexity 1 24 0 4 659 188 86 29 0 chr3R 9754518 9754553 -18150500 + (CACCAT)n Simple_repeat Simple_repeat 2 37 0 4 659 21 0 0 0 chr3R 9755265 9755286 -18149767 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 234 156 0 0 chr3R 9755959 9756004 -18149049 + (TTCGGG)n Simple_repeat Simple_repeat 4 48 0 4 659 22 0 0 0 chr3R 9759503 9759525 -18145528 + AT_rich Low_complexity Low_complexity 1 22 0 4 659 21 0 0 0 chr3R 9761368 9761389 -18143664 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 204 40 0 0 chr3R 9764298 9764323 -18140730 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 659 249 139 0 0 chr3R 9764386 9764429 -18140624 + (CAACT)n Simple_repeat Simple_repeat 4 46 0 4 659 22 35 0 0 chr3R 9765086 9765115 -18139938 + AT_rich Low_complexity Low_complexity 1 29 0 4 659 28 61 0 0 chr3R 9765235 9765284 -18139769 + AT_rich Low_complexity Low_complexity 1 49 0 4 659 21 0 0 0 chr3R 9767274 9767295 -18137758 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 230 106 21 0 chr3R 9769227 9769274 -18135779 + (TTTA)n Simple_repeat Simple_repeat 4 51 0 4 659 26 30 0 0 chr3R 9769289 9769322 -18135731 + AT_rich Low_complexity Low_complexity 1 33 0 4 659 192 40 0 0 chr3R 9773767 9773792 -18131261 + (CAGAC)n Simple_repeat Simple_repeat 3 27 0 4 659 21 36 0 0 chr3R 9775023 9775051 -18130002 + AT_rich Low_complexity Low_complexity 1 28 0 4 659 28 48 0 0 chr3R 9776978 9777020 -18128033 + AT_rich Low_complexity Low_complexity 1 42 0 4 659 24 67 0 0 chr3R 9777201 9777246 -18127807 + AT_rich Low_complexity Low_complexity 1 45 0 4 659 21 0 0 0 chr3R 9777639 9777660 -18127393 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 25 51 0 0 chr3R 9779165 9779204 -18125849 + AT_rich Low_complexity Low_complexity 1 39 0 4 659 30 45 0 0 chr3R 9783091 9783135 -18121918 + AT_rich Low_complexity Low_complexity 1 44 0 4 659 22 0 0 0 chr3R 9783591 9783613 -18121440 + AT_rich Low_complexity Low_complexity 1 22 0 4 659 26 30 0 0 chr3R 9790490 9790523 -18114530 + AT_rich Low_complexity Low_complexity 1 33 0 4 659 315 85 0 0 chr3R 9794145 9794192 -18110861 + (TAA)n Simple_repeat Simple_repeat 1 47 0 4 659 362 288 6 34 chr3R 9794213 9794389 -18110664 + T-rich Low_complexity Low_complexity 4 174 0 4 659 523 144 0 46 chr3R 9794754 9794907 -18110146 + (TTG)n Simple_repeat Simple_repeat 2 147 0 4 659 26 0 0 0 chr3R 9796375 9796401 -18108652 + AT_rich Low_complexity Low_complexity 1 26 0 4 659 215 180 0 39 chr3R 9797729 9797781 -18107272 + GA-rich Low_complexity Low_complexity 3 52 0 4 659 180 0 0 0 chr3R 9797827 9797847 -18107206 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 659 210 118 0 0 chr3R 9798511 9798545 -18106508 + (TC)n Simple_repeat Simple_repeat 2 35 0 4 659 206 227 26 13 chr3R 9800549 9800625 -18104428 + T-rich Low_complexity Low_complexity 6 82 0 4 659 189 0 0 0 chr3R 9801993 9802014 -18103039 + (TC)n Simple_repeat Simple_repeat 2 22 0 4 659 228 182 0 35 chr3R 9802392 9802449 -18102604 + CT-rich Low_complexity Low_complexity 2 56 0 4 659 200 227 0 0 chr3R 9803909 9803953 -18101100 + A-rich Low_complexity Low_complexity 1 44 0 4 659 202 186 47 0 chr3R 9804470 9804513 -18100540 + (CATA)n Simple_repeat Simple_repeat 3 47 0 4 659 19529 2 0 0 chr3R 9804514 9806619 -18098434 + DMRT1B LINE R1 3079 5183 0 4 659 189 0 0 0 chr3R 9807292 9807313 -18097740 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 659 525 102 18 9 chr3R 9807458 9807567 -18097486 + (CTG)n Simple_repeat Simple_repeat 1 110 0 4 659 222 62 0 0 chr3R 9807831 9807863 -18097190 + (GGA)n Simple_repeat Simple_repeat 1 32 0 4 659 251 246 0 0 chr3R 9807887 9807944 -18097109 - ROO_I LTR Pao -7515 741 685 4 659 297 135 0 0 chr3R 9808131 9808183 -18096870 + (CTG)n Simple_repeat Simple_repeat 2 53 0 4 659 232 202 0 35 chr3R 9808237 9808324 -18096729 + (CTG)n Simple_repeat Simple_repeat 3 86 0 4 659 197 253 0 11 chr3R 9808385 9808473 -18096580 + (CTG)n Simple_repeat Simple_repeat 3 89 0 4 659 209 179 0 0 chr3R 9808538 9808577 -18096476 + (CTG)n Simple_repeat Simple_repeat 2 40 0 4 659 228 111 0 0 chr3R 9809543 9809579 -18095474 + (GA)n Simple_repeat Simple_repeat 2 37 0 4 659 234 0 0 0 chr3R 9811154 9811180 -18093873 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 659 216 0 0 0 chr3R 9811958 9811982 -18093071 + (CAGC)n Simple_repeat Simple_repeat 3 26 0 4 659 27 29 0 0 chr3R 9815848 9815882 -18089171 + AT_rich Low_complexity Low_complexity 1 34 0 4 659 22 35 0 0 chr3R 9817342 9817371 -18087682 + AT_rich Low_complexity Low_complexity 1 29 0 4 659 29 0 0 0 chr3R 9817756 9817785 -18087268 + AT_rich Low_complexity Low_complexity 1 29 0 4 659 212 164 16 32 chr3R 9818410 9818473 -18086580 + (TATAA)n Simple_repeat Simple_repeat 4 65 0 4 659 21 0 0 0 chr3R 9818591 9818612 -18086441 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 208 250 0 0 chr3R 9818896 9818944 -18086109 + T-rich Low_complexity Low_complexity 1 48 0 4 659 22 0 0 0 chr3R 9819543 9819565 -18085488 + AT_rich Low_complexity Low_complexity 1 22 0 4 659 204 40 0 0 chr3R 9820741 9820766 -18084287 + (A)n Simple_repeat Simple_repeat 1 25 0 4 659 320 278 9 18 chr3R 9821785 9821895 -18083158 + (CAA)n Simple_repeat Simple_repeat 3 111 0 4 659 186 143 0 0 chr3R 9822640 9822675 -18082378 + (CGAAT)n Simple_repeat Simple_repeat 4 38 0 4 659 213 128 26 0 chr3R 9823226 9823265 -18081788 + (CGAAA)n Simple_repeat Simple_repeat 3 42 0 4 659 21 0 0 0 chr3R 9823960 9823981 -18081072 + AT_rich Low_complexity Low_complexity 1 21 0 4 659 226 344 0 11 chr3R 9824413 9824507 -18080546 + (ACTG)n Simple_repeat Simple_repeat 3 95 0 4 659 30 45 0 0 chr3R 9826140 9826184 -18078869 + AT_rich Low_complexity Low_complexity 1 44 0 4 659 279 0 0 0 chr3R 9828354 9828385 -18076668 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 659 189 121 0 0 chr3R 9829605 9829638 -18075415 + (GGTTG)n Simple_repeat Simple_repeat 4 36 0 4 659 249 239 15 15 chr3R 9829710 9829778 -18075275 + (CATATA)n Simple_repeat Simple_repeat 4 71 0 4 659 222 118 0 0 chr3R 9829998 9830032 -18075021 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 660 201 207 17 17 chr3R 9831907 9831966 -18073087 + T-rich Low_complexity Low_complexity 5 63 0 4 660 24 67 0 0 chr3R 9833437 9833482 -18071571 + AT_rich Low_complexity Low_complexity 1 45 0 4 660 222 220 0 20 chr3R 9835315 9835366 -18069687 + (CTG)n Simple_repeat Simple_repeat 3 52 0 4 660 224 93 47 0 chr3R 9835749 9835792 -18069261 + (CATTT)n Simple_repeat Simple_repeat 2 46 0 4 660 201 196 0 0 chr3R 9836010 9836056 -18068997 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 660 180 0 0 0 chr3R 9838831 9838851 -18066202 + (GCTTG)n Simple_repeat Simple_repeat 4 23 0 4 660 209 83 0 27 chr3R 9839785 9839822 -18065231 + (CAGTT)n Simple_repeat Simple_repeat 5 40 0 4 660 24 53 0 0 chr3R 9841967 9842005 -18063048 + AT_rich Low_complexity Low_complexity 1 38 0 4 660 32 0 0 0 chr3R 9842502 9842534 -18062519 + AT_rich Low_complexity Low_complexity 1 32 0 4 660 24 32 0 0 chr3R 9843052 9843083 -18061970 + AT_rich Low_complexity Low_complexity 1 31 0 4 660 408 55 0 0 chr3R 9843519 9843574 -18061479 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 660 41 0 0 0 chr3R 9843988 9844029 -18061024 + AT_rich Low_complexity Low_complexity 1 41 0 4 660 21 0 0 0 chr3R 9844611 9844632 -18060421 + AT_rich Low_complexity Low_complexity 1 21 0 4 660 255 170 0 0 chr3R 9845321 9845368 -18059685 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 660 29 28 0 0 chr3R 9845920 9845956 -18059097 + AT_rich Low_complexity Low_complexity 1 36 0 4 660 11330 93 3 18 chr3R 9847423 9849185 -18055868 - S_DM DNA Tc1 0 1736 1 4 660 207 219 0 59 chr3R 9849980 9850048 -18055005 + A-rich Low_complexity Low_complexity 4 67 0 4 660 249 83 0 0 chr3R 9852439 9852475 -18052578 + (GA)n Simple_repeat Simple_repeat 2 37 0 4 660 201 74 0 0 chr3R 9857516 9857543 -18047510 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 660 39 60 0 0 chr3R 9857916 9857983 -18047070 + AT_rich Low_complexity Low_complexity 1 67 0 4 660 24 32 0 0 chr3R 9862952 9862983 -18042070 + AT_rich Low_complexity Low_complexity 1 31 0 4 660 303 113 0 0 chr3R 9863332 9863385 -18041668 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 660 21 71 0 0 chr3R 9864151 9864193 -18040860 + AT_rich Low_complexity Low_complexity 1 42 0 4 660 183 49 48 24 chr3R 9866134 9866176 -18038877 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 660 193 146 20 20 chr3R 9866173 9866222 -18038831 + (TTA)n Simple_repeat Simple_repeat 2 50 0 4 660 186 43 0 0 chr3R 9868755 9868778 -18036275 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 660 27 29 0 0 chr3R 9869134 9869168 -18035885 + AT_rich Low_complexity Low_complexity 1 34 0 4 660 321 135 0 0 chr3R 9872430 9872482 -18032571 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 660 30 105 0 0 chr3R 9872606 9872720 -18032333 + AT_rich Low_complexity Low_complexity 1 114 0 4 660 216 111 0 0 chr3R 9874022 9874058 -18030995 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 660 216 0 0 0 chr3R 9874898 9874922 -18030131 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 660 23 0 0 0 chr3R 9876845 9876868 -18028185 + AT_rich Low_complexity Low_complexity 1 23 0 4 660 212 284 0 0 chr3R 9877414 9877481 -18027572 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 660 21 0 0 0 chr3R 9881589 9881610 -18023443 + AT_rich Low_complexity Low_complexity 1 21 0 4 660 27 49 0 0 chr3R 9882228 9882269 -18022784 + AT_rich Low_complexity Low_complexity 1 41 0 4 660 23 33 0 0 chr3R 9883550 9883580 -18021473 + AT_rich Low_complexity Low_complexity 1 30 0 4 660 294 183 0 0 chr3R 9885678 9885749 -18019304 + (TA)n Simple_repeat Simple_repeat 1 71 0 4 660 22 0 0 0 chr3R 9885866 9885888 -18019165 + AT_rich Low_complexity Low_complexity 1 22 0 4 660 249 108 0 0 chr3R 9887113 9887150 -18017903 + (TCG)n Simple_repeat Simple_repeat 2 38 0 4 660 216 212 0 0 chr3R 9887271 9887337 -18017716 + T-rich Low_complexity Low_complexity 1 66 0 4 660 201 271 0 14 chr3R 9889208 9889279 -18015774 + T-rich Low_complexity Low_complexity 3 72 0 4 660 23 68 0 0 chr3R 9890640 9890684 -18014369 + AT_rich Low_complexity Low_complexity 1 44 0 4 660 31 26 0 0 chr3R 9892211 9892249 -18012804 + AT_rich Low_complexity Low_complexity 1 38 0 4 660 42 20 0 0 chr3R 9892598 9892647 -18012406 + AT_rich Low_complexity Low_complexity 1 49 0 4 660 206 118 0 0 chr3R 9893260 9893294 -18011759 + (T)n Simple_repeat Simple_repeat 1 34 0 4 660 26 0 0 0 chr3R 9894713 9894739 -18010314 + AT_rich Low_complexity Low_complexity 1 26 0 4 660 23 0 0 0 chr3R 9896789 9896812 -18008241 + AT_rich Low_complexity Low_complexity 1 23 0 4 660 22 0 0 0 chr3R 9898481 9898503 -18006550 + AT_rich Low_complexity Low_complexity 1 22 0 4 660 24 53 0 0 chr3R 9901373 9901411 -18003642 + AT_rich Low_complexity Low_complexity 1 38 0 4 660 180 77 0 0 chr3R 9901461 9901487 -18003566 + (T)n Simple_repeat Simple_repeat 1 26 0 4 660 207 0 0 0 chr3R 9901672 9901695 -18003358 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 660 198 156 0 0 chr3R 9906481 9906526 -17998527 + (CAG)n Simple_repeat Simple_repeat 1 45 0 4 660 273 57 0 0 chr3R 9906856 9906891 -17998162 + (CAG)n Simple_repeat Simple_repeat 3 37 0 4 660 362 157 0 0 chr3R 9907395 9907484 -17997569 + ROO_I LTR Pao 644 732 -7524 4 660 23 68 0 0 chr3R 9910005 9910049 -17995004 + AT_rich Low_complexity Low_complexity 1 44 0 4 660 43 64 0 0 chr3R 9910365 9910443 -17994610 + AT_rich Low_complexity Low_complexity 1 78 0 4 660 201 147 0 0 chr3R 9911987 9912021 -17993032 + (CAGT)n Simple_repeat Simple_repeat 1 34 0 4 660 223 200 30 30 chr3R 9912722 9912789 -17992264 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 4 660 267 191 0 0 chr3R 9918647 9918710 -17986343 + (TTG)n Simple_repeat Simple_repeat 3 65 0 4 660 23 0 0 0 chr3R 9920762 9920785 -17984268 + AT_rich Low_complexity Low_complexity 1 23 0 4 660 22 35 0 0 chr3R 9922287 9922316 -17982737 + AT_rich Low_complexity Low_complexity 1 29 0 4 660 35 0 0 0 chr3R 9923738 9923773 -17981280 + AT_rich Low_complexity Low_complexity 1 35 0 4 660 35 63 0 0 chr3R 9923976 9924039 -17981014 + AT_rich Low_complexity Low_complexity 1 63 0 4 660 41 21 0 0 chr3R 9924799 9924847 -17980206 + AT_rich Low_complexity Low_complexity 1 48 0 4 660 234 0 0 0 chr3R 9926449 9926475 -17978578 + (GA)n Simple_repeat Simple_repeat 2 27 0 4 660 46 0 0 0 chr3R 9926729 9926775 -17978278 + AT_rich Low_complexity Low_complexity 1 46 0 4 660 24 0 0 0 chr3R 9933180 9933204 -17971849 + AT_rich Low_complexity Low_complexity 1 24 0 4 660 26 0 0 0 chr3R 9934878 9934904 -17970149 + AT_rich Low_complexity Low_complexity 1 26 0 4 660 24 53 0 0 chr3R 9936816 9936854 -17968199 + AT_rich Low_complexity Low_complexity 1 38 0 4 660 22 0 0 0 chr3R 9938142 9938164 -17966889 + AT_rich Low_complexity Low_complexity 1 22 0 4 660 183 100 0 0 chr3R 9939510 9939540 -17965513 + (CTG)n Simple_repeat Simple_repeat 2 31 0 4 660 22 0 0 0 chr3R 9942136 9942158 -17962895 + AT_rich Low_complexity Low_complexity 1 22 0 4 660 21 36 0 0 chr3R 9948262 9948290 -17956763 + AT_rich Low_complexity Low_complexity 1 28 0 4 660 21 0 0 0 chr3R 9950163 9950184 -17954869 + AT_rich Low_complexity Low_complexity 1 21 0 4 660 34 0 0 0 chr3R 9951336 9951370 -17953683 + AT_rich Low_complexity Low_complexity 1 34 0 4 660 21 71 0 0 chr3R 9956960 9957002 -17948051 + AT_rich Low_complexity Low_complexity 1 42 0 4 660 26 30 0 0 chr3R 9957860 9957893 -17947160 + AT_rich Low_complexity Low_complexity 1 33 0 4 660 30 100 0 0 chr3R 9958175 9958275 -17946778 + AT_rich Low_complexity Low_complexity 1 100 0 4 660 22 0 0 0 chr3R 9959856 9959878 -17945175 + AT_rich Low_complexity Low_complexity 1 22 0 4 661 24 32 0 0 chr3R 9963321 9963352 -17941701 + AT_rich Low_complexity Low_complexity 1 31 0 4 661 21 0 0 0 chr3R 9963426 9963447 -17941606 + AT_rich Low_complexity Low_complexity 1 21 0 4 661 33 25 0 0 chr3R 9964677 9964717 -17940336 + AT_rich Low_complexity Low_complexity 1 40 0 4 661 182 193 18 0 chr3R 9966145 9966202 -17938851 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 661 28 86 0 0 chr3R 9971283 9971353 -17933700 + AT_rich Low_complexity Low_complexity 1 70 0 4 661 26 30 0 0 chr3R 9976627 9976660 -17928393 + AT_rich Low_complexity Low_complexity 1 33 0 4 661 28 0 0 0 chr3R 9979678 9979706 -17925347 + AT_rich Low_complexity Low_complexity 1 28 0 4 661 28 29 0 0 chr3R 9980353 9980388 -17924665 + AT_rich Low_complexity Low_complexity 1 35 0 4 661 357 82 0 0 chr3R 9989838 9989887 -17915166 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 661 33 25 0 0 chr3R 9991654 9991694 -17913359 + AT_rich Low_complexity Low_complexity 1 40 0 4 661 43 56 0 0 chr3R 9992686 9992757 -17912296 + AT_rich Low_complexity Low_complexity 1 71 0 4 661 31 58 0 0 chr3R 9995413 9995465 -17909588 + AT_rich Low_complexity Low_complexity 1 52 0 4 661 216 235 0 29 chr3R 9997220 9997290 -17907763 + (GTTTG)n Simple_repeat Simple_repeat 2 69 0 4 661 38 51 0 0 chr3R 9997893 9997952 -17907101 + AT_rich Low_complexity Low_complexity 1 59 0 4 661 330 123 0 0 chr3R 9999942 9999999 -17905054 + (TCCA)n Simple_repeat Simple_repeat 3 59 0 4 661 21 71 0 0 chr3R 10002282 10002324 -17902729 + AT_rich Low_complexity Low_complexity 1 42 0 4 661 200 276 0 13 chr3R 10002988 10003065 -17901988 + (TTTG)n Simple_repeat Simple_repeat 1 76 0 4 661 222 211 0 0 chr3R 10003029 10003081 -17901972 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 661 43297 1 0 0 chr3R 10006588 10011276 -17893777 + FW_DM LINE Jockey 5 4692 0 4 661 180 0 0 0 chr3R 10011276 10011296 -17893757 + (A)n Simple_repeat Simple_repeat 1 20 0 4 661 216 0 0 0 chr3R 10012095 10012119 -17892934 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 661 200 194 0 0 chr3R 10017890 10017926 -17887127 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 661 3994 2 0 0 chr3R 10020204 10020632 -17884421 + ROO_LTR LTR Pao 1 428 0 4 661 74667 1 2 0 chr3R 10020632 10028868 -17876185 + ROO_I LTR Pao 1 8256 0 4 661 3994 2 0 0 chr3R 10028868 10029296 -17875757 + ROO_LTR LTR Pao 1 428 0 4 661 22 0 0 0 chr3R 10031267 10031289 -17873764 + AT_rich Low_complexity Low_complexity 1 22 0 4 661 25 31 0 0 chr3R 10032517 10032549 -17872504 + AT_rich Low_complexity Low_complexity 1 32 0 4 661 23 0 0 0 chr3R 10037348 10037371 -17867682 + AT_rich Low_complexity Low_complexity 1 23 0 4 661 26 0 0 0 chr3R 10037396 10037422 -17867631 + AT_rich Low_complexity Low_complexity 1 26 0 4 661 21 36 0 0 chr3R 10037763 10037791 -17867262 + AT_rich Low_complexity Low_complexity 1 28 0 4 661 183 100 0 0 chr3R 10038687 10038717 -17866336 + (A)n Simple_repeat Simple_repeat 1 30 0 4 661 269 288 0 0 chr3R 10039864 10039944 -17865109 + (TGG)n Simple_repeat Simple_repeat 2 81 0 4 661 33 0 0 0 chr3R 10044484 10044517 -17860536 + AT_rich Low_complexity Low_complexity 1 33 0 4 661 24 32 0 0 chr3R 10048437 10048468 -17856585 + AT_rich Low_complexity Low_complexity 1 31 0 4 661 219 133 0 0 chr3R 10048895 10048940 -17856113 + (TGG)n Simple_repeat Simple_repeat 1 45 0 4 661 22 56 0 0 chr3R 10055032 10055068 -17849985 + AT_rich Low_complexity Low_complexity 1 36 0 4 661 26 0 0 0 chr3R 10056374 10056400 -17848653 + AT_rich Low_complexity Low_complexity 1 26 0 4 661 22 35 0 0 chr3R 10056873 10056902 -17848151 + AT_rich Low_complexity Low_complexity 1 29 0 4 661 31 26 0 0 chr3R 10060513 10060551 -17844502 + AT_rich Low_complexity Low_complexity 1 38 0 4 661 36 0 0 0 chr3R 10062675 10062711 -17842342 + AT_rich Low_complexity Low_complexity 1 36 0 4 661 4969 7 35 0 chr3R 10062711 10063285 -17841768 - IDEFIX_LTR LTR Gypsy 0 594 1 4 661 49463 9 0 1 chr3R 10063285 10068920 -17836133 - IDEFIX_I LTR Gypsy 0 5628 1 4 661 25 0 0 0 chr3R 10069362 10069387 -17835666 + AT_rich Low_complexity Low_complexity 1 25 0 4 661 4969 7 35 0 chr3R 10069577 10070151 -17834902 - IDEFIX_LTR LTR Gypsy 0 594 1 4 661 248 108 0 0 chr3R 10070119 10070156 -17834897 + BARI1 DNA Tc1 3 39 -1711 4 661 229 204 0 0 chr3R 10071955 10072004 -17833049 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 661 13115 3 0 10 chr3R 10072161 10073597 -17831456 + LINEJ1_DM LINE Jockey 3600 5020 0 4 661 28 61 0 0 chr3R 10074620 10074669 -17830384 + AT_rich Low_complexity Low_complexity 1 49 0 4 661 241 197 64 26 chr3R 10076177 10076255 -17828798 + DNAREP1_DM LINE Penelope 432 512 -82 4 661 21 57 0 0 chr3R 10077816 10077851 -17827202 + AT_rich Low_complexity Low_complexity 1 35 0 4 661 183 80 0 0 chr3R 10078304 10078329 -17826724 + (CACTG)n Simple_repeat Simple_repeat 5 29 0 4 661 26 0 0 0 chr3R 10081715 10081741 -17823312 + AT_rich Low_complexity Low_complexity 1 26 0 4 661 280 217 43 0 chr3R 10082510 10082579 -17822474 + (CTA)n Simple_repeat Simple_repeat 2 73 0 4 661 192 40 0 0 chr3R 10083457 10083482 -17821571 + (T)n Simple_repeat Simple_repeat 1 25 0 4 661 33 25 0 0 chr3R 10084620 10084660 -17820393 + AT_rich Low_complexity Low_complexity 1 40 0 4 661 26 30 0 0 chr3R 10085119 10085152 -17819901 + AT_rich Low_complexity Low_complexity 1 33 0 4 661 21 71 0 0 chr3R 10085815 10085857 -17819196 + AT_rich Low_complexity Low_complexity 1 42 0 4 661 26 30 0 0 chr3R 10085863 10085896 -17819157 + AT_rich Low_complexity Low_complexity 1 33 0 4 661 42 77 0 0 chr3R 10087124 10087215 -17817838 + AT_rich Low_complexity Low_complexity 1 91 0 4 661 204 40 0 0 chr3R 10089568 10089593 -17815460 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 662 210 150 0 0 chr3R 10093213 10093253 -17811800 + (CTG)n Simple_repeat Simple_repeat 3 42 0 4 662 264 273 0 0 chr3R 10100422 10100499 -17804554 + (CAT)n Simple_repeat Simple_repeat 3 79 0 4 662 30 59 0 0 chr3R 10101324 10101375 -17803678 + AT_rich Low_complexity Low_complexity 1 51 0 4 662 25 31 0 0 chr3R 10104078 10104110 -17800943 + AT_rich Low_complexity Low_complexity 1 32 0 4 662 180 0 0 0 chr3R 10104591 10104611 -17800442 + (TC)n Simple_repeat Simple_repeat 2 21 0 4 662 198 191 0 0 chr3R 10104815 10104862 -17800191 + (TTG)n Simple_repeat Simple_repeat 3 49 0 4 662 211 176 0 0 chr3R 10105125 10105159 -17799894 + (CACCAT)n Simple_repeat Simple_repeat 4 37 0 4 662 207 111 0 27 chr3R 10105532 10105569 -17799484 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 4 662 21 0 0 0 chr3R 10105662 10105683 -17799370 + AT_rich Low_complexity Low_complexity 1 21 0 4 662 21 0 0 0 chr3R 10106088 10106109 -17798944 + AT_rich Low_complexity Low_complexity 1 21 0 4 662 207 0 0 0 chr3R 10108608 10108631 -17796422 + (GA)n Simple_repeat Simple_repeat 1 23 0 4 662 255 114 0 0 chr3R 10111030 10111074 -17793979 + (GA)n Simple_repeat Simple_repeat 2 45 0 4 662 213 214 0 0 chr3R 10112329 10112371 -17792682 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 662 258 169 35 24 chr3R 10113584 10113669 -17791384 + (TAA)n Simple_repeat Simple_repeat 2 87 0 4 662 201 138 0 0 chr3R 10115125 10115154 -17789899 + (TCG)n Simple_repeat Simple_repeat 1 29 0 4 662 21 0 0 0 chr3R 10117053 10117074 -17787979 + AT_rich Low_complexity Low_complexity 1 21 0 4 662 217 51 51 0 chr3R 10117703 10117742 -17787311 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 4 662 24 0 0 0 chr3R 10118415 10118439 -17786614 + AT_rich Low_complexity Low_complexity 1 24 0 4 662 23 0 0 0 chr3R 10120426 10120449 -17784604 + AT_rich Low_complexity Low_complexity 1 23 0 4 662 280 138 0 49 chr3R 10126378 10126439 -17778614 + ROO_I LTR Pao 651 708 -7548 4 662 23 54 0 0 chr3R 10130266 10130303 -17774750 + AT_rich Low_complexity Low_complexity 1 37 0 4 662 28 29 0 0 chr3R 10138110 10138145 -17766908 + AT_rich Low_complexity Low_complexity 1 35 0 4 662 34 24 0 0 chr3R 10139496 10139537 -17765516 + AT_rich Low_complexity Low_complexity 1 41 0 4 662 23 33 0 0 chr3R 10139729 10139759 -17765294 + AT_rich Low_complexity Low_complexity 1 30 0 4 662 201 158 53 0 chr3R 10139918 10139975 -17765078 + (TA)n Simple_repeat Simple_repeat 1 60 0 4 662 200 189 0 0 chr3R 10143736 10143773 -17761280 + (CGA)n Simple_repeat Simple_repeat 2 38 0 4 662 204 40 0 0 chr3R 10145345 10145370 -17759683 + (TAA)n Simple_repeat Simple_repeat 3 27 0 4 662 207 204 0 0 chr3R 10147234 10147288 -17757765 + (CAA)n Simple_repeat Simple_repeat 3 56 0 4 662 239 200 23 70 chr3R 10147746 10147832 -17757221 - ROO_I LTR Pao -7511 745 664 4 662 186 150 0 0 chr3R 10148792 10148832 -17756221 + (CTG)n Simple_repeat Simple_repeat 1 40 0 4 662 271 272 0 24 chr3R 10149635 10149718 -17755335 + (TTG)n Simple_repeat Simple_repeat 1 81 0 4 662 213 197 32 16 chr3R 10152121 10152183 -17752870 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 662 204 40 0 0 chr3R 10156022 10156047 -17749006 + (TCC)n Simple_repeat Simple_repeat 2 26 0 4 662 23 0 0 0 chr3R 10161975 10161998 -17743055 + AT_rich Low_complexity Low_complexity 1 23 0 4 662 26 30 0 0 chr3R 10162007 10162040 -17743013 + AT_rich Low_complexity Low_complexity 1 33 0 4 662 22 35 0 0 chr3R 10163132 10163161 -17741892 + AT_rich Low_complexity Low_complexity 1 29 0 4 662 199 54 0 51 chr3R 10163680 10163719 -17741334 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 662 234 143 15 31 chr3R 10164484 10164549 -17740504 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 662 180 77 0 0 chr3R 10164709 10164735 -17740318 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 662 236 53 26 0 chr3R 10165836 10165874 -17739179 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 662 204 150 25 0 chr3R 10168405 10168460 -17736593 + (CAA)n Simple_repeat Simple_repeat 1 56 0 4 662 180 111 0 0 chr3R 10170088 10170115 -17734938 + (CTG)n Simple_repeat Simple_repeat 3 29 0 4 662 204 130 0 61 chr3R 10170411 10170460 -17734593 + (CTG)n Simple_repeat Simple_repeat 1 46 0 4 662 480 140 0 0 chr3R 10170709 10170802 -17734251 + (CTG)n Simple_repeat Simple_repeat 1 93 0 4 662 261 254 0 27 chr3R 10172919 10172992 -17732061 + GA-rich Low_complexity Low_complexity 1 71 0 4 662 22 0 0 0 chr3R 10173234 10173256 -17731797 + AT_rich Low_complexity Low_complexity 1 22 0 4 662 22 35 0 0 chr3R 10174406 10174435 -17730618 + AT_rich Low_complexity Low_complexity 1 29 0 4 662 198 0 0 0 chr3R 10174563 10174585 -17730468 + (TTTTC)n Simple_repeat Simple_repeat 1 22 0 4 662 231 88 0 0 chr3R 10174827 10174861 -17730192 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 662 21 0 0 0 chr3R 10176962 10176983 -17728070 + AT_rich Low_complexity Low_complexity 1 21 0 4 662 22 0 0 0 chr3R 10176989 10177011 -17728042 + AT_rich Low_complexity Low_complexity 1 22 0 4 662 201 162 0 0 chr3R 10178124 10178161 -17726892 + T-rich Low_complexity Low_complexity 4 40 0 4 662 31 58 0 0 chr3R 10179578 10179630 -17725423 + AT_rich Low_complexity Low_complexity 1 52 0 4 662 195 100 0 0 chr3R 10183028 10183058 -17721995 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 662 24 67 0 0 chr3R 10186932 10186977 -17718076 + AT_rich Low_complexity Low_complexity 1 45 0 4 662 273 155 0 0 chr3R 10187889 10187947 -17717106 + (ACTG)n Simple_repeat Simple_repeat 2 59 0 4 662 24 53 0 0 chr3R 10188324 10188362 -17716691 + AT_rich Low_complexity Low_complexity 1 38 0 4 662 324 0 0 0 chr3R 10189160 10189196 -17715857 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 662 189 107 0 0 chr3R 10189363 10189391 -17715662 + (TATG)n Simple_repeat Simple_repeat 1 28 0 4 662 211 227 0 0 chr3R 10189650 10189694 -17715359 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 4 662 226 295 0 0 chr3R 10193091 10193169 -17711884 + T-rich Low_complexity Low_complexity 1 78 0 4 662 23 54 0 0 chr3R 10193360 10193397 -17711656 + AT_rich Low_complexity Low_complexity 1 37 0 4 662 24 0 0 0 chr3R 10193619 10193643 -17711410 + AT_rich Low_complexity Low_complexity 1 24 0 4 662 216 95 71 0 chr3R 10194296 10194338 -17710715 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 4 662 221 281 0 0 chr3R 10194568 10194625 -17710428 + (TA)n Simple_repeat Simple_repeat 1 57 0 4 662 263 177 0 16 chr3R 10195060 10195123 -17709930 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 662 232 250 14 27 chr3R 10195341 10195415 -17709638 + (TTG)n Simple_repeat Simple_repeat 3 75 0 4 662 325 141 28 0 chr3R 10195776 10195847 -17709206 + (CTG)n Simple_repeat Simple_repeat 2 74 0 4 662 261 234 0 0 chr3R 10195999 10196063 -17708990 + GA-rich Low_complexity Low_complexity 2 65 0 4 662 201 159 0 0 chr3R 10196860 10196904 -17708149 + (TTTCG)n Simple_repeat Simple_repeat 5 48 0 4 662 183 167 0 0 chr3R 10197096 10197138 -17707915 + T-rich Low_complexity Low_complexity 1 42 0 4 662 22 0 0 0 chr3R 10197146 10197168 -17707885 + AT_rich Low_complexity Low_complexity 1 22 0 4 662 192 125 0 0 chr3R 10198502 10198534 -17706519 + (ATG)n Simple_repeat Simple_repeat 1 32 0 4 662 232 288 0 15 chr3R 10198745 10198812 -17706241 + (CTG)n Simple_repeat Simple_repeat 3 68 0 4 662 215 236 18 0 chr3R 10199270 10199325 -17705728 + CT-rich Low_complexity Low_complexity 1 56 0 4 662 202 205 0 0 chr3R 10199459 10199498 -17705555 + CT-rich Low_complexity Low_complexity 2 40 0 4 662 24 32 0 0 chr3R 10199672 10199703 -17705350 + AT_rich Low_complexity Low_complexity 1 31 0 4 662 276 111 0 0 chr3R 10201568 10201613 -17703440 + (CAG)n Simple_repeat Simple_repeat 3 47 0 4 662 226 270 16 0 chr3R 10201821 10201884 -17703169 + (CAG)n Simple_repeat Simple_repeat 1 64 0 4 662 201 39 0 0 chr3R 10204765 10204791 -17700262 + (CAATT)n Simple_repeat Simple_repeat 5 30 0 4 662 342 45 0 0 chr3R 10204825 10204869 -17700184 + (CAA)n Simple_repeat Simple_repeat 1 44 0 4 662 36 0 0 0 chr3R 10205350 10205386 -17699667 + AT_rich Low_complexity Low_complexity 1 36 0 4 662 201 263 0 0 chr3R 10205542 10205599 -17699454 + (TTG)n Simple_repeat Simple_repeat 1 57 0 4 662 240 180 20 0 chr3R 10205643 10205693 -17699360 + DOC3_DM LINE Jockey 512 562 -4178 4 662 180 111 0 0 chr3R 10208118 10208145 -17696908 + (GAGTG)n Simple_repeat Simple_repeat 3 29 0 4 662 288 53 0 0 chr3R 10208255 10208293 -17696760 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 662 230 222 48 0 chr3R 10208900 10208963 -17696090 + (GGTTG)n Simple_repeat Simple_repeat 3 68 0 4 662 195 100 0 0 chr3R 10209886 10209916 -17695137 + (TTTTTA)n Simple_repeat Simple_repeat 2 31 0 4 662 29 0 0 0 chr3R 10210185 10210214 -17694839 + AT_rich Low_complexity Low_complexity 1 29 0 4 662 29 0 0 0 chr3R 10211903 10211932 -17693121 + AT_rich Low_complexity Low_complexity 1 29 0 4 662 180 77 0 0 chr3R 10212326 10212352 -17692701 + (CACTC)n Simple_repeat Simple_repeat 5 30 0 4 662 21 36 0 0 chr3R 10214415 10214443 -17690610 + AT_rich Low_complexity Low_complexity 1 28 0 4 662 183 129 0 0 chr3R 10215825 10215856 -17689197 + (TTG)n Simple_repeat Simple_repeat 1 31 0 4 662 22 0 0 0 chr3R 10215915 10215937 -17689116 + AT_rich Low_complexity Low_complexity 1 22 0 4 662 258 32 0 0 chr3R 10217640 10217671 -17687382 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 662 33 25 0 0 chr3R 10218868 10218908 -17686145 + AT_rich Low_complexity Low_complexity 1 40 0 4 663 22 0 0 0 chr3R 10223743 10223765 -17681288 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 209 208 0 0 chr3R 10224414 10224462 -17680591 + A-rich Low_complexity Low_complexity 1 48 0 4 663 209 204 0 0 chr3R 10224708 10224752 -17680301 + (GATTG)n Simple_repeat Simple_repeat 5 48 0 4 663 183 114 0 0 chr3R 10224943 10224978 -17680075 + (T)n Simple_repeat Simple_repeat 1 35 0 4 663 219 69 0 0 chr3R 10225517 10225546 -17679507 + (GA)n Simple_repeat Simple_repeat 2 30 0 4 663 182 37 37 0 chr3R 10227135 10227162 -17677891 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 663 192 40 0 0 chr3R 10228197 10228222 -17676831 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 663 180 77 0 0 chr3R 10229931 10229957 -17675096 + (ATG)n Simple_repeat Simple_repeat 3 28 0 4 663 240 35 0 0 chr3R 10231317 10231346 -17673707 + (TTCTG)n Simple_repeat Simple_repeat 4 32 0 4 663 183 80 0 0 chr3R 10231533 10231558 -17673495 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 4 663 218 32 32 0 chr3R 10232949 10232980 -17672073 + (CAT)n Simple_repeat Simple_repeat 1 32 0 4 663 28 29 0 0 chr3R 10236242 10236277 -17668776 + AT_rich Low_complexity Low_complexity 1 35 0 4 663 282 169 36 12 chr3R 10237134 10237218 -17667835 - ROO_I LTR Pao -7534 722 637 4 663 22 35 0 0 chr3R 10238625 10238654 -17666399 + AT_rich Low_complexity Low_complexity 1 29 0 4 663 204 40 0 0 chr3R 10241556 10241581 -17663472 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 4 663 278 200 15 0 chr3R 10242544 10242609 -17662444 + (CTG)n Simple_repeat Simple_repeat 1 66 0 4 663 189 121 0 0 chr3R 10244645 10244678 -17660375 + (CAG)n Simple_repeat Simple_repeat 1 33 0 4 663 237 33 0 0 chr3R 10247269 10247299 -17657754 + (CAG)n Simple_repeat Simple_repeat 1 30 0 4 663 49 0 0 0 chr3R 10247734 10247783 -17657270 + AT_rich Low_complexity Low_complexity 1 49 0 4 663 231 263 0 0 chr3R 10253244 10253301 -17651752 + (CTG)n Simple_repeat Simple_repeat 3 59 0 4 663 236 131 0 21 chr3R 10253323 10253370 -17651683 + (CTG)n Simple_repeat Simple_repeat 2 47 0 4 663 21 36 0 0 chr3R 10254873 10254901 -17650152 + AT_rich Low_complexity Low_complexity 1 28 0 4 663 201 39 0 0 chr3R 10256620 10256646 -17648407 + (T)n Simple_repeat Simple_repeat 1 26 0 4 663 225 132 0 0 chr3R 10257761 10257799 -17647254 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 663 205 309 0 0 chr3R 10257927 10257982 -17647071 + (CTG)n Simple_repeat Simple_repeat 2 56 0 4 663 211 300 0 0 chr3R 10258057 10258117 -17646936 + (TTG)n Simple_repeat Simple_repeat 2 61 0 4 663 320 210 0 46 chr3R 10258258 10258388 -17646665 + (CTG)n Simple_repeat Simple_repeat 2 125 0 4 663 27 29 0 0 chr3R 10260300 10260334 -17644719 + AT_rich Low_complexity Low_complexity 1 34 0 4 663 23 0 0 0 chr3R 10260518 10260541 -17644512 + AT_rich Low_complexity Low_complexity 1 23 0 4 663 189 147 0 0 chr3R 10261949 10261983 -17643070 + (CAAT)n Simple_repeat Simple_repeat 1 34 0 4 663 205 222 0 36 chr3R 10266121 10266177 -17638876 + (TCTG)n Simple_repeat Simple_repeat 1 54 0 4 663 204 167 0 0 chr3R 10266739 10266787 -17638266 + A-rich Low_complexity Low_complexity 1 48 0 4 663 234 267 0 0 chr3R 10267520 10267580 -17637473 + (TTG)n Simple_repeat Simple_repeat 1 60 0 4 663 21 36 0 0 chr3R 10268960 10268988 -17636065 + AT_rich Low_complexity Low_complexity 1 28 0 4 663 22 0 0 0 chr3R 10269143 10269165 -17635888 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 290 283 20 0 chr3R 10271835 10271934 -17633119 + ROO_I LTR Pao 644 744 -7512 4 663 201 184 0 20 chr3R 10273141 10273191 -17631862 + CT-rich Low_complexity Low_complexity 2 50 0 4 663 207 152 0 0 chr3R 10275490 10275536 -17629517 + (ACTG)n Simple_repeat Simple_repeat 4 49 0 4 663 456 51 0 0 chr3R 10277132 10277191 -17627862 + (CAG)n Simple_repeat Simple_repeat 1 59 0 4 663 234 0 0 0 chr3R 10279337 10279363 -17625690 + (TA)n Simple_repeat Simple_repeat 1 26 0 4 663 22 0 0 0 chr3R 10281328 10281350 -17623703 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 294 215 0 0 chr3R 10282825 10282904 -17622149 + (TCTG)n Simple_repeat Simple_repeat 3 81 0 4 663 213 139 0 0 chr3R 10282946 10282989 -17622064 + (TCTG)n Simple_repeat Simple_repeat 4 46 0 4 663 182 62 0 30 chr3R 10287878 10287911 -17617142 + (CAGG)n Simple_repeat Simple_repeat 1 32 0 4 663 30 27 0 0 chr3R 10288822 10288859 -17616194 + AT_rich Low_complexity Low_complexity 1 37 0 4 663 25 0 0 0 chr3R 10289911 10289936 -17615117 + AT_rich Low_complexity Low_complexity 1 25 0 4 663 201 94 0 0 chr3R 10291519 10291551 -17613502 + (T)n Simple_repeat Simple_repeat 1 32 0 4 663 230 229 16 0 chr3R 10292492 10292553 -17612500 + (CAG)n Simple_repeat Simple_repeat 1 62 0 4 663 279 179 39 69 chr3R 10293788 10293890 -17611163 - ROO_I LTR Pao -7522 734 636 4 663 231 170 0 0 chr3R 10293894 10293941 -17611112 + (TTTG)n Simple_repeat Simple_repeat 1 47 0 4 663 335 73 18 0 chr3R 10294129 10294184 -17610869 + (GA)n Simple_repeat Simple_repeat 2 57 0 4 663 251 194 36 27 chr3R 10294533 10294644 -17610409 + ROO_I LTR Pao 646 757 -7499 4 663 252 59 0 0 chr3R 10298906 10298940 -17606113 + (GA)n Simple_repeat Simple_repeat 2 35 0 4 663 252 292 0 0 chr3R 10306697 10306769 -17598284 + GA-rich Low_complexity Low_complexity 1 72 0 4 663 21 0 0 0 chr3R 10306833 10306854 -17598199 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 23 33 0 0 chr3R 10312323 10312353 -17592700 + AT_rich Low_complexity Low_complexity 1 30 0 4 663 189 107 0 0 chr3R 10312711 10312739 -17592314 + (TTTTTA)n Simple_repeat Simple_repeat 3 30 0 4 663 246 105 0 0 chr3R 10315953 10315991 -17589062 + (AGTTG)n Simple_repeat Simple_repeat 5 42 0 4 663 21 82 0 0 chr3R 10316786 10316835 -17588218 + AT_rich Low_complexity Low_complexity 1 49 0 4 663 232 97 0 0 chr3R 10317217 10317248 -17587805 + TART_B1 LINE telomeric 56 86 -10568 4 663 198 103 0 0 chr3R 10317499 10317528 -17587525 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 4 663 30 27 0 0 chr3R 10320834 10320871 -17584182 + AT_rich Low_complexity Low_complexity 1 37 0 4 663 216 179 0 0 chr3R 10325760 10325799 -17579254 + (TTG)n Simple_repeat Simple_repeat 1 39 0 4 663 21 0 0 0 chr3R 10326554 10326575 -17578478 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 210 37 0 0 chr3R 10328728 10328755 -17576298 + (CTG)n Simple_repeat Simple_repeat 1 27 0 4 663 246 105 0 0 chr3R 10328796 10328834 -17576219 + (CGGA)n Simple_repeat Simple_repeat 4 41 0 4 663 26 30 0 0 chr3R 10328883 10328916 -17576137 + AT_rich Low_complexity Low_complexity 1 33 0 4 663 232 218 13 13 chr3R 10330736 10330815 -17574238 + ROO_I LTR Pao 655 733 -7523 4 663 22 0 0 0 chr3R 10331071 10331093 -17573960 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 245 300 10 0 chr3R 10331206 10331306 -17573747 + (TTG)n Simple_repeat Simple_repeat 3 103 0 4 663 21 0 0 0 chr3R 10333847 10333868 -17571185 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 237 132 0 0 chr3R 10334624 10334662 -17570391 + (CAG)n Simple_repeat Simple_repeat 1 38 0 4 663 25 0 0 0 chr3R 10334995 10335020 -17570033 + AT_rich Low_complexity Low_complexity 1 25 0 4 663 276 130 0 0 chr3R 10335324 10335370 -17569683 + (CGGA)n Simple_repeat Simple_repeat 2 47 0 4 663 21 36 0 0 chr3R 10339286 10339314 -17565739 + AT_rich Low_complexity Low_complexity 1 28 0 4 663 384 88 0 0 chr3R 10340617 10340674 -17564379 + (TAGA)n Simple_repeat Simple_repeat 3 59 0 4 663 23 54 0 0 chr3R 10341010 10341047 -17564006 + AT_rich Low_complexity Low_complexity 1 37 0 4 663 22 0 0 0 chr3R 10343170 10343192 -17561861 + AT_rich Low_complexity Low_complexity 1 22 0 4 663 21 0 0 0 chr3R 10349904 10349925 -17555128 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 21 0 0 0 chr3R 10351331 10351352 -17553701 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 31 0 0 0 chr3R 10352744 10352775 -17552278 + AT_rich Low_complexity Low_complexity 1 31 0 4 663 288 137 0 0 chr3R 10353154 10353205 -17551848 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 664 192 40 0 0 chr3R 10359999 10360024 -17545029 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 664 39 60 0 0 chr3R 10361944 10362011 -17543042 + AT_rich Low_complexity Low_complexity 1 67 0 4 664 210 71 0 0 chr3R 10363808 10363836 -17541217 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 664 21 0 0 0 chr3R 10364585 10364606 -17540447 + AT_rich Low_complexity Low_complexity 1 21 0 4 664 202 150 25 0 chr3R 10365624 10365664 -17539389 + (CATATA)n Simple_repeat Simple_repeat 5 45 0 4 664 31 68 0 0 chr3R 10370399 10370458 -17534595 + AT_rich Low_complexity Low_complexity 1 59 0 4 664 200 232 0 28 chr3R 10374886 10374957 -17530096 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 664 37 39 0 0 chr3R 10376037 10376088 -17528965 + AT_rich Low_complexity Low_complexity 1 51 0 4 664 192 40 0 0 chr3R 10378206 10378231 -17526822 + (T)n Simple_repeat Simple_repeat 1 25 0 4 664 186 71 0 0 chr3R 10383314 10383342 -17521711 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 4 664 28 29 0 0 chr3R 10387192 10387227 -17517826 + AT_rich Low_complexity Low_complexity 1 35 0 4 664 23 33 0 0 chr3R 10387319 10387349 -17517704 + AT_rich Low_complexity Low_complexity 1 30 0 4 664 28 0 0 0 chr3R 10388738 10388766 -17516287 + AT_rich Low_complexity Low_complexity 1 28 0 4 664 250 26 25 25 chr3R 10389390 10389430 -17515623 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 664 27 62 0 0 chr3R 10389712 10389760 -17515293 + AT_rich Low_complexity Low_complexity 1 48 0 4 664 241 182 0 0 chr3R 10390906 10390950 -17514103 + DNAREP1_DM LINE Penelope 16 59 -535 4 664 27 49 0 0 chr3R 10391020 10391061 -17513992 + AT_rich Low_complexity Low_complexity 1 41 0 4 664 21 0 0 0 chr3R 10394841 10394862 -17510191 + AT_rich Low_complexity Low_complexity 1 21 0 4 664 198 0 0 0 chr3R 10402826 10402848 -17502205 + (TTG)n Simple_repeat Simple_repeat 2 23 0 4 664 239 114 23 0 chr3R 10403997 10404041 -17501012 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 664 21 36 0 0 chr3R 10404385 10404413 -17500640 + AT_rich Low_complexity Low_complexity 1 28 0 4 664 28 71 0 0 chr3R 10405497 10405553 -17499500 + AT_rich Low_complexity Low_complexity 1 56 0 4 664 21 0 0 0 chr3R 10406187 10406208 -17498845 + AT_rich Low_complexity Low_complexity 1 21 0 4 664 205 186 0 0 chr3R 10406960 10407003 -17498050 + T-rich Low_complexity Low_complexity 1 43 0 4 664 28 29 0 0 chr3R 10408700 10408735 -17496318 + AT_rich Low_complexity Low_complexity 1 35 0 4 664 23 54 0 0 chr3R 10409054 10409091 -17495962 + AT_rich Low_complexity Low_complexity 1 37 0 4 664 26 0 0 0 chr3R 10410463 10410489 -17494564 + AT_rich Low_complexity Low_complexity 1 26 0 4 664 29 0 0 0 chr3R 10416988 10417017 -17488036 + AT_rich Low_complexity Low_complexity 1 29 0 4 664 26 0 0 0 chr3R 10422044 10422070 -17482983 + AT_rich Low_complexity Low_complexity 1 26 0 4 664 180 111 0 0 chr3R 10422296 10422323 -17482730 + (CGA)n Simple_repeat Simple_repeat 3 29 0 4 664 180 0 0 0 chr3R 10423265 10423285 -17481768 + (A)n Simple_repeat Simple_repeat 1 20 0 4 664 23 33 0 0 chr3R 10423830 10423860 -17481193 + AT_rich Low_complexity Low_complexity 1 30 0 4 664 291 150 0 0 chr3R 10424086 10424146 -17480907 + (TC)n Simple_repeat Simple_repeat 2 61 0 4 664 25 51 0 0 chr3R 10428653 10428692 -17476361 + AT_rich Low_complexity Low_complexity 1 39 0 4 664 25 31 0 0 chr3R 10430343 10430375 -17474678 + AT_rich Low_complexity Low_complexity 1 32 0 4 664 21 0 0 0 chr3R 10433778 10433799 -17471254 + AT_rich Low_complexity Low_complexity 1 21 0 4 664 24 85 0 0 chr3R 10434984 10435043 -17470010 + AT_rich Low_complexity Low_complexity 1 59 0 4 664 186 43 0 0 chr3R 10437028 10437051 -17468002 + (TGAA)n Simple_repeat Simple_repeat 4 26 0 4 664 27 49 0 0 chr3R 10440386 10440427 -17464626 + AT_rich Low_complexity Low_complexity 1 41 0 4 664 224 217 0 0 chr3R 10440567 10440613 -17464440 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 664 29 28 0 0 chr3R 10442847 10442883 -17462170 + AT_rich Low_complexity Low_complexity 1 36 0 4 664 22 35 0 0 chr3R 10444564 10444593 -17460460 + AT_rich Low_complexity Low_complexity 1 29 0 4 664 202 189 0 36 chr3R 10445985 10446040 -17459013 + A-rich Low_complexity Low_complexity 2 54 0 4 664 207 157 0 0 chr3R 10448804 10448855 -17456198 + A-rich Low_complexity Low_complexity 1 51 0 4 664 201 175 0 0 chr3R 10450201 10450241 -17454812 + (CAA)n Simple_repeat Simple_repeat 2 41 0 4 664 264 111 0 0 chr3R 10453677 10453722 -17451331 + (TCC)n Simple_repeat Simple_repeat 1 45 0 4 664 22 0 0 0 chr3R 10458007 10458029 -17447024 + AT_rich Low_complexity Low_complexity 1 22 0 4 664 291 264 0 0 chr3R 10468472 10468563 -17436490 + T-rich Low_complexity Low_complexity 1 91 0 4 664 185 167 19 0 chr3R 10469732 10469786 -17435267 + (TA)n Simple_repeat Simple_repeat 2 56 0 4 664 250 216 0 0 chr3R 10469828 10469879 -17435174 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 664 213 216 0 0 chr3R 10470689 10470726 -17434327 + (CTG)n Simple_repeat Simple_repeat 1 37 0 4 664 225 180 0 0 chr3R 10471463 10471513 -17433540 + (TTG)n Simple_repeat Simple_repeat 1 50 0 4 664 223 231 0 0 chr3R 10473839 10473891 -17431162 + (CTG)n Simple_repeat Simple_repeat 3 54 0 4 664 271 156 0 0 chr3R 10474840 10474904 -17430149 - ROO_I LTR Pao -7528 728 665 4 664 203 254 0 0 chr3R 10475222 10475277 -17429776 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 664 21 0 0 0 chr3R 10479680 10479701 -17425352 + AT_rich Low_complexity Low_complexity 1 21 0 4 664 256 83 0 0 chr3R 10481747 10481783 -17423270 - DNAREP1_DM LINE Penelope 0 594 559 4 664 494 174 91 115 chr3R 10481846 10482054 -17422999 - DNAREP1_DM LINE Penelope -391 203 1 4 665 31 58 0 0 chr3R 10489000 10489052 -17416001 + AT_rich Low_complexity Low_complexity 1 52 0 4 665 237 119 0 0 chr3R 10489428 10489470 -17415583 + (GGA)n Simple_repeat Simple_repeat 1 42 0 4 665 235 303 0 52 chr3R 10489845 10489960 -17415093 + GA-rich Low_complexity Low_complexity 1 109 0 4 665 21 0 0 0 chr3R 10501347 10501368 -17403685 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 26 50 0 0 chr3R 10503279 10503319 -17401734 + AT_rich Low_complexity Low_complexity 1 40 0 4 665 183 80 0 0 chr3R 10507457 10507482 -17397571 + (TTTCC)n Simple_repeat Simple_repeat 1 25 0 4 665 188 163 0 23 chr3R 10508553 10508597 -17396456 + (TATG)n Simple_repeat Simple_repeat 1 43 0 4 665 28 71 0 0 chr3R 10510457 10510513 -17394540 + AT_rich Low_complexity Low_complexity 1 56 0 4 665 21 0 0 0 chr3R 10512571 10512592 -17392461 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 24 32 0 0 chr3R 10513839 10513870 -17391183 + AT_rich Low_complexity Low_complexity 1 31 0 4 665 264 30 0 0 chr3R 10516566 10516599 -17388454 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 665 21 71 0 0 chr3R 10517386 10517428 -17387625 + AT_rich Low_complexity Low_complexity 1 42 0 4 665 192 40 0 0 chr3R 10517650 10517675 -17387378 + (CAA)n Simple_repeat Simple_repeat 3 27 0 4 665 26 82 0 0 chr3R 10521896 10521957 -17383096 + AT_rich Low_complexity Low_complexity 1 61 0 4 665 28 48 0 0 chr3R 10521982 10522024 -17383029 + AT_rich Low_complexity Low_complexity 1 42 0 4 665 30 69 0 0 chr3R 10523225 10523283 -17381770 + AT_rich Low_complexity Low_complexity 1 58 0 4 665 198 0 0 0 chr3R 10523672 10523694 -17381359 + (CATTT)n Simple_repeat Simple_repeat 2 23 0 4 665 21 0 0 0 chr3R 10523917 10523938 -17381115 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 242 227 0 0 chr3R 10524749 10524815 -17380238 + ROO_I LTR Pao 642 707 -7549 4 665 46 0 0 0 chr3R 10525906 10525952 -17379101 + AT_rich Low_complexity Low_complexity 1 46 0 4 665 270 95 0 0 chr3R 10529457 10529499 -17375554 + (TCTG)n Simple_repeat Simple_repeat 3 44 0 4 665 186 103 0 0 chr3R 10530915 10530944 -17374109 + (TA)n Simple_repeat Simple_repeat 1 29 0 4 665 326 140 0 0 chr3R 10532703 10532753 -17372300 + DNAREP1_DM LINE Penelope 20 69 -525 4 665 275 302 17 8 chr3R 10532789 10532804 -17372249 - P_DG DNA P -19 2869 2755 4 665 607 111 40 0 chr3R 10532804 10532903 -17372150 + DNAREP1_DM LINE Penelope 492 594 0 4 665 23 0 0 0 chr3R 10536453 10536476 -17368577 + AT_rich Low_complexity Low_complexity 1 23 0 4 665 216 67 0 0 chr3R 10537090 10537120 -17367933 + (TAG)n Simple_repeat Simple_repeat 2 31 0 4 665 210 156 0 0 chr3R 10537693 10537738 -17367315 + (CATTC)n Simple_repeat Simple_repeat 5 49 0 4 665 189 107 0 0 chr3R 10539918 10539946 -17365107 + (CTG)n Simple_repeat Simple_repeat 2 29 0 4 665 189 107 0 0 chr3R 10540107 10540135 -17364918 + (CAA)n Simple_repeat Simple_repeat 2 29 0 4 665 338 42 21 0 chr3R 10540397 10540445 -17364608 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 665 232 120 40 0 chr3R 10541267 10541317 -17363736 + (CTG)n Simple_repeat Simple_repeat 3 54 0 4 665 243 88 0 0 chr3R 10543578 10543612 -17361441 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 665 205 211 0 19 chr3R 10543931 10543984 -17361069 + A-rich Low_complexity Low_complexity 3 54 0 4 665 211 246 16 0 chr3R 10544302 10544363 -17360690 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 665 211 264 0 0 chr3R 10544838 10544891 -17360162 + (CTG)n Simple_repeat Simple_repeat 1 53 0 4 665 216 163 0 0 chr3R 10545038 10545081 -17359972 + (CAG)n Simple_repeat Simple_repeat 2 44 0 4 665 204 224 0 0 chr3R 10545553 10545620 -17359433 + (TA)n Simple_repeat Simple_repeat 1 67 0 4 665 180 158 0 0 chr3R 10548493 10548531 -17356522 + T-rich Low_complexity Low_complexity 1 38 0 4 665 259 183 12 12 chr3R 10549146 10549229 -17355824 + (TTG)n Simple_repeat Simple_repeat 1 83 0 4 665 189 0 0 0 chr3R 10553323 10553344 -17351709 + (TTG)n Simple_repeat Simple_repeat 2 22 0 4 665 228 67 0 0 chr3R 10553376 10553406 -17351647 + (CCAA)n Simple_repeat Simple_repeat 1 30 0 4 665 194 0 0 37 chr3R 10553524 10553551 -17351502 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 665 22 56 0 0 chr3R 10554142 10554178 -17350875 + AT_rich Low_complexity Low_complexity 1 36 0 4 665 24 67 0 0 chr3R 10554219 10554264 -17350789 + AT_rich Low_complexity Low_complexity 1 45 0 4 665 34 0 0 0 chr3R 10555150 10555184 -17349869 + AT_rich Low_complexity Low_complexity 1 34 0 4 665 218 224 20 0 chr3R 10555608 10555657 -17349396 + (CATA)n Simple_repeat Simple_repeat 3 52 0 4 665 21 0 0 0 chr3R 10558243 10558264 -17346789 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 185 0 40 0 chr3R 10558463 10558488 -17346565 + (TAA)n Simple_repeat Simple_repeat 3 28 0 4 665 231 273 0 0 chr3R 10558695 10558772 -17346281 - ROO_I LTR Pao -7528 728 652 4 665 234 136 0 0 chr3R 10558906 10558950 -17346103 + (CTG)n Simple_repeat Simple_repeat 1 44 0 4 665 244 315 0 0 chr3R 10559105 10559194 -17345859 + (TTG)n Simple_repeat Simple_repeat 1 89 0 4 665 285 29 0 0 chr3R 10561613 10561647 -17343406 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 665 21 0 0 0 chr3R 10562002 10562023 -17343030 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 23 0 0 0 chr3R 10562187 10562210 -17342843 + AT_rich Low_complexity Low_complexity 1 23 0 4 665 223 211 0 37 chr3R 10563996 10564050 -17341003 + GA-rich Low_complexity Low_complexity 1 52 0 4 665 202 211 0 0 chr3R 10566152 10566204 -17338849 + (TTTG)n Simple_repeat Simple_repeat 4 55 0 4 665 228 170 0 0 chr3R 10568008 10568061 -17336992 + (CAA)n Simple_repeat Simple_repeat 1 53 0 4 665 25 0 0 0 chr3R 10569089 10569114 -17335939 + AT_rich Low_complexity Low_complexity 1 25 0 4 665 270 56 0 0 chr3R 10573776 10573812 -17331241 + (GAGTG)n Simple_repeat Simple_repeat 2 37 0 4 665 26 0 0 0 chr3R 10574121 10574147 -17330906 + AT_rich Low_complexity Low_complexity 1 26 0 4 665 209 33 0 32 chr3R 10575756 10575787 -17329266 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 4 665 23 0 0 0 chr3R 10576227 10576250 -17328803 + AT_rich Low_complexity Low_complexity 1 23 0 4 665 21 36 0 0 chr3R 10580189 10580217 -17324836 + AT_rich Low_complexity Low_complexity 1 28 0 4 665 32 26 0 0 chr3R 10583488 10583527 -17321526 + AT_rich Low_complexity Low_complexity 1 39 0 4 665 214 162 0 0 chr3R 10584078 10584115 -17320938 + (ATTCG)n Simple_repeat Simple_repeat 4 40 0 4 665 22 0 0 0 chr3R 10584247 10584269 -17320784 + AT_rich Low_complexity Low_complexity 1 22 0 4 665 23 33 0 0 chr3R 10585039 10585069 -17319984 + AT_rich Low_complexity Low_complexity 1 30 0 4 665 21 0 0 0 chr3R 10585672 10585693 -17319360 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 269 279 0 0 chr3R 10585965 10586033 -17319020 + (CAA)n Simple_repeat Simple_repeat 3 70 0 4 665 207 190 0 23 chr3R 10586417 10586460 -17318593 + (CAGA)n Simple_repeat Simple_repeat 3 44 0 4 665 202 224 0 0 chr3R 10586763 10586812 -17318241 + A-rich Low_complexity Low_complexity 1 49 0 4 665 435 19 0 0 chr3R 10590336 10590388 -17314665 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 665 243 175 0 0 chr3R 10590880 10590920 -17314133 + (ATGGTG)n Simple_repeat Simple_repeat 4 43 0 4 665 26 30 0 0 chr3R 10595411 10595444 -17309609 + AT_rich Low_complexity Low_complexity 1 33 0 4 665 201 147 0 0 chr3R 10597308 10597342 -17307711 + (CTCA)n Simple_repeat Simple_repeat 2 35 0 4 665 21 0 0 0 chr3R 10597606 10597627 -17307426 + AT_rich Low_complexity Low_complexity 1 21 0 4 665 22 0 0 0 chr3R 10597864 10597886 -17307167 + AT_rich Low_complexity Low_complexity 1 22 0 4 665 228 86 0 0 chr3R 10598585 10598620 -17306433 + (A)n Simple_repeat Simple_repeat 1 35 0 4 665 204 40 0 0 chr3R 10599632 10599657 -17305396 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 665 210 71 0 0 chr3R 10600916 10600944 -17304109 + (CAG)n Simple_repeat Simple_repeat 3 30 0 4 665 26 0 0 0 chr3R 10601912 10601938 -17303115 + AT_rich Low_complexity Low_complexity 1 26 0 4 665 186 43 0 0 chr3R 10602358 10602381 -17302672 + (A)n Simple_repeat Simple_repeat 1 23 0 4 665 216 0 0 0 chr3R 10603867 10603891 -17301162 + (A)n Simple_repeat Simple_repeat 1 24 0 4 665 21 36 0 0 chr3R 10604005 10604033 -17301020 + AT_rich Low_complexity Low_complexity 1 28 0 4 665 22 56 0 0 chr3R 10606918 10606954 -17298099 + AT_rich Low_complexity Low_complexity 1 36 0 4 665 185 0 0 39 chr3R 10607065 10607091 -17297962 + (TA)n Simple_repeat Simple_repeat 2 26 0 4 665 213 39 0 0 chr3R 10607953 10607979 -17297074 + (CAT)n Simple_repeat Simple_repeat 2 27 0 4 665 23 68 0 0 chr3R 10609243 10609287 -17295766 + AT_rich Low_complexity Low_complexity 1 44 0 4 665 21 36 0 0 chr3R 10613691 10613719 -17291334 + AT_rich Low_complexity Low_complexity 1 28 0 4 666 180 152 0 0 chr3R 10618061 10618094 -17286959 + (CAA)n Simple_repeat Simple_repeat 1 33 0 4 666 22 0 0 0 chr3R 10618306 10618328 -17286725 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 265 75 19 19 chr3R 10619053 10619107 -17285946 + (CCAA)n Simple_repeat Simple_repeat 4 57 0 4 666 195 42 0 0 chr3R 10619935 10619959 -17285094 + (ATTG)n Simple_repeat Simple_repeat 3 26 0 4 666 23 0 0 0 chr3R 10621568 10621591 -17283462 + AT_rich Low_complexity Low_complexity 1 23 0 4 666 26 30 0 0 chr3R 10623437 10623470 -17281583 + AT_rich Low_complexity Low_complexity 1 33 0 4 666 29 60 0 0 chr3R 10625940 10625990 -17279063 + AT_rich Low_complexity Low_complexity 1 50 0 4 666 222 128 0 0 chr3R 10643331 10643370 -17261683 + (CTG)n Simple_repeat Simple_repeat 3 41 0 4 666 260 266 0 0 chr3R 10643550 10643614 -17261439 + (TTG)n Simple_repeat Simple_repeat 1 64 0 4 666 226 270 16 0 chr3R 10645627 10645690 -17259363 + (TTG)n Simple_repeat Simple_repeat 1 64 0 4 666 225 132 0 0 chr3R 10646758 10646796 -17258257 + (TCC)n Simple_repeat Simple_repeat 2 39 0 4 666 195 69 0 0 chr3R 10650123 10650152 -17254901 + (TTAA)n Simple_repeat Simple_repeat 2 30 0 4 666 198 71 0 0 chr3R 10652508 10652536 -17252517 + (CTG)n Simple_repeat Simple_repeat 1 28 0 4 666 22 0 0 0 chr3R 10653050 10653072 -17251981 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 208 286 0 0 chr3R 10656006 10656076 -17248977 + (CAGAGA)n Simple_repeat Simple_repeat 5 74 0 4 666 187 51 24 71 chr3R 10656253 10656295 -17248758 + (TTG)n Simple_repeat Simple_repeat 1 40 0 4 666 304 284 12 12 chr3R 10656417 10656581 -17248472 + (TTG)n Simple_repeat Simple_repeat 1 164 0 4 666 189 178 0 0 chr3R 10656799 10656844 -17248209 + GA-rich Low_complexity Low_complexity 1 45 0 4 666 26 50 0 0 chr3R 10661013 10661053 -17244000 + AT_rich Low_complexity Low_complexity 1 40 0 4 666 21 0 0 0 chr3R 10664613 10664634 -17240419 + AT_rich Low_complexity Low_complexity 1 21 0 4 666 26 30 0 0 chr3R 10673689 10673722 -17231331 + AT_rich Low_complexity Low_complexity 1 33 0 4 666 32 26 0 0 chr3R 10675592 10675631 -17229422 + AT_rich Low_complexity Low_complexity 1 39 0 4 666 24 0 0 0 chr3R 10677670 10677694 -17227359 + AT_rich Low_complexity Low_complexity 1 24 0 4 666 207 100 0 0 chr3R 10679720 10679750 -17225303 + (TC)n Simple_repeat Simple_repeat 2 31 0 4 666 306 50 0 0 chr3R 10685454 10685494 -17219559 + (CTG)n Simple_repeat Simple_repeat 3 42 0 4 666 22 0 0 0 chr3R 10685792 10685814 -17219239 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 31 26 0 0 chr3R 10687296 10687334 -17217719 + AT_rich Low_complexity Low_complexity 1 38 0 4 666 192 135 0 0 chr3R 10687709 10687746 -17217307 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 666 24 0 0 0 chr3R 10689401 10689425 -17215628 + AT_rich Low_complexity Low_complexity 1 24 0 4 666 246 32 0 0 chr3R 10691227 10691258 -17213795 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 666 212 271 0 0 chr3R 10694089 10694148 -17210905 + T-rich Low_complexity Low_complexity 1 59 0 4 666 26 0 0 0 chr3R 10696563 10696589 -17208464 + AT_rich Low_complexity Low_complexity 1 26 0 4 666 186 103 0 0 chr3R 10703841 10703870 -17201183 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 4 666 204 125 0 0 chr3R 10706086 10706118 -17198935 + (CAG)n Simple_repeat Simple_repeat 1 32 0 4 666 22 35 0 0 chr3R 10714742 10714771 -17190282 + AT_rich Low_complexity Low_complexity 1 29 0 4 666 25 31 0 0 chr3R 10719778 10719810 -17185243 + AT_rich Low_complexity Low_complexity 1 32 0 4 666 22 70 0 0 chr3R 10719878 10719921 -17185132 + AT_rich Low_complexity Low_complexity 1 43 0 4 666 22 0 0 0 chr3R 10719931 10719953 -17185100 + AT_rich Low_complexity Low_complexity 1 22 0 4 666 21 57 0 0 chr3R 10724156 10724191 -17180862 + AT_rich Low_complexity Low_complexity 1 35 0 4 666 564 15 0 0 chr3R 10724249 10724314 -17180739 + (TA)n Simple_repeat Simple_repeat 1 65 0 4 666 204 312 0 0 chr3R 10725230 10725294 -17179759 + (CGA)n Simple_repeat Simple_repeat 2 65 0 4 666 267 222 28 0 chr3R 10735201 10735273 -17169780 + (TG)n Simple_repeat Simple_repeat 1 74 0 4 666 194 0 39 0 chr3R 10737590 10737616 -17167437 + (TATG)n Simple_repeat Simple_repeat 2 28 0 4 666 21 0 0 0 chr3R 10742731 10742752 -17162301 + AT_rich Low_complexity Low_complexity 1 21 0 4 666 21 36 0 0 chr3R 10742825 10742853 -17162200 + AT_rich Low_complexity Low_complexity 1 28 0 4 666 210 37 0 0 chr3R 10744307 10744334 -17160719 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 4 666 24 0 0 0 chr3R 10744451 10744475 -17160578 + AT_rich Low_complexity Low_complexity 1 24 0 4 666 26 0 0 0 chr3R 10747808 10747834 -17157219 + AT_rich Low_complexity Low_complexity 1 26 0 4 667 213 132 0 0 chr3R 10749307 10749345 -17155708 + (TCCG)n Simple_repeat Simple_repeat 3 40 0 4 667 37 52 0 0 chr3R 10749920 10749978 -17155075 + AT_rich Low_complexity Low_complexity 1 58 0 4 667 21 0 0 0 chr3R 10750650 10750671 -17154382 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 227 103 0 0 chr3R 10752826 10752855 -17152198 - DNAREP1_DM LINE Penelope -534 60 32 4 667 25 51 0 0 chr3R 10753596 10753635 -17151418 + AT_rich Low_complexity Low_complexity 1 39 0 4 667 26 74 0 0 chr3R 10754048 10754102 -17150951 + AT_rich Low_complexity Low_complexity 1 54 0 4 667 26 0 0 0 chr3R 10754410 10754436 -17150617 + AT_rich Low_complexity Low_complexity 1 26 0 4 667 26 50 0 0 chr3R 10754776 10754816 -17150237 + AT_rich Low_complexity Low_complexity 1 40 0 4 667 228 163 23 0 chr3R 10756756 10756799 -17148254 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 667 21 57 0 0 chr3R 10758393 10758428 -17146625 + AT_rich Low_complexity Low_complexity 1 35 0 4 667 186 43 0 0 chr3R 10759116 10759139 -17145914 + (TGAG)n Simple_repeat Simple_repeat 1 23 0 4 667 348 156 26 0 chr3R 10759524 10759601 -17145452 - DNAREP1_DM LINE Penelope -339 255 177 4 667 23 0 0 0 chr3R 10762443 10762466 -17142587 + AT_rich Low_complexity Low_complexity 1 23 0 4 667 208 222 0 0 chr3R 10763152 10763197 -17141856 + (TTCGG)n Simple_repeat Simple_repeat 5 49 0 4 667 27 49 0 0 chr3R 10764307 10764348 -17140705 + AT_rich Low_complexity Low_complexity 1 41 0 4 667 26 64 0 0 chr3R 10765274 10765321 -17139732 + AT_rich Low_complexity Low_complexity 1 47 0 4 667 27 29 0 0 chr3R 10765370 10765404 -17139649 + AT_rich Low_complexity Low_complexity 1 34 0 4 667 21 57 0 0 chr3R 10766848 10766883 -17138170 + AT_rich Low_complexity Low_complexity 1 35 0 4 667 25 51 0 0 chr3R 10767372 10767411 -17137642 + AT_rich Low_complexity Low_complexity 1 39 0 4 667 229 170 0 36 chr3R 10767681 10767736 -17137317 + T-rich Low_complexity Low_complexity 3 55 0 4 667 24 0 0 0 chr3R 10769326 10769350 -17135703 + AT_rich Low_complexity Low_complexity 1 24 0 4 667 27 62 0 0 chr3R 10770382 10770430 -17134623 + AT_rich Low_complexity Low_complexity 1 48 0 4 667 321 145 0 0 chr3R 10770639 10770701 -17134352 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 667 218 95 0 23 chr3R 10772113 10772156 -17132897 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 667 208 193 0 34 chr3R 10772307 10772366 -17132687 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 667 37 39 0 0 chr3R 10774256 10774307 -17130746 + AT_rich Low_complexity Low_complexity 1 51 0 4 667 252 59 0 0 chr3R 10775046 10775080 -17129973 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 667 31 58 0 0 chr3R 10776039 10776091 -17128962 + AT_rich Low_complexity Low_complexity 1 52 0 4 667 203 296 0 0 chr3R 10776478 10776549 -17128504 + (CACCAT)n Simple_repeat Simple_repeat 5 75 0 4 667 21 0 0 0 chr3R 10780735 10780756 -17124297 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 35 0 0 0 chr3R 10782013 10782048 -17123005 + AT_rich Low_complexity Low_complexity 1 35 0 4 667 183 42 0 0 chr3R 10782418 10782442 -17122611 + (CAGA)n Simple_repeat Simple_repeat 4 27 0 4 667 180 0 0 0 chr3R 10782670 10782690 -17122363 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 667 27 29 0 0 chr3R 10784356 10784390 -17120663 + AT_rich Low_complexity Low_complexity 1 34 0 4 667 252 312 0 0 chr3R 10784535 10784615 -17120438 + (TG)n Simple_repeat Simple_repeat 1 80 0 4 667 25 95 0 0 chr3R 10785022 10785096 -17119957 + AT_rich Low_complexity Low_complexity 1 74 0 4 667 28 29 0 0 chr3R 10786890 10786925 -17118128 + AT_rich Low_complexity Low_complexity 1 35 0 4 667 49 43 0 0 chr3R 10787599 10787669 -17117384 + AT_rich Low_complexity Low_complexity 1 70 0 4 667 40 59 0 0 chr3R 10787995 10788063 -17116990 + AT_rich Low_complexity Low_complexity 1 68 0 4 667 21 0 0 0 chr3R 10793673 10793694 -17111359 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 26 0 0 0 chr3R 10793819 10793845 -17111208 + AT_rich Low_complexity Low_complexity 1 26 0 4 667 202 231 15 15 chr3R 10795804 10795870 -17109183 + (CA)n Simple_repeat Simple_repeat 2 67 0 4 667 183 80 0 0 chr3R 10797246 10797271 -17107782 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 667 44 56 0 0 chr3R 10801783 10801855 -17103198 + AT_rich Low_complexity Low_complexity 1 72 0 4 667 22 0 0 0 chr3R 10806310 10806332 -17098721 + AT_rich Low_complexity Low_complexity 1 22 0 4 667 29 28 0 0 chr3R 10808029 10808065 -17096988 + AT_rich Low_complexity Low_complexity 1 36 0 4 667 24 0 0 0 chr3R 10809497 10809521 -17095532 + AT_rich Low_complexity Low_complexity 1 24 0 4 667 285 109 0 0 chr3R 10812025 10812071 -17092982 + (GA)n Simple_repeat Simple_repeat 2 47 0 4 667 21 0 0 0 chr3R 10812509 10812530 -17092523 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 25 51 0 0 chr3R 10818766 10818805 -17086248 + AT_rich Low_complexity Low_complexity 1 39 0 4 667 240 59 0 0 chr3R 10818941 10818975 -17086078 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 667 261 270 0 0 chr3R 10819066 10819129 -17085924 + (CTG)n Simple_repeat Simple_repeat 3 65 0 4 667 22 35 0 0 chr3R 10819260 10819289 -17085764 + AT_rich Low_complexity Low_complexity 1 29 0 4 667 33 80 0 0 chr3R 10822350 10822425 -17082628 + AT_rich Low_complexity Low_complexity 1 75 0 4 667 189 107 0 0 chr3R 10825705 10825733 -17079320 + (CAAAAA)n Simple_repeat Simple_repeat 5 32 0 4 667 21 57 0 0 chr3R 10826907 10826942 -17078111 + AT_rich Low_complexity Low_complexity 1 35 0 4 667 22 80 0 0 chr3R 10828138 10828188 -17076865 + AT_rich Low_complexity Low_complexity 1 50 0 4 667 48 57 0 28 chr3R 10833620 10833729 -17071324 + AT_rich Low_complexity Low_complexity 1 106 0 4 667 21 71 0 0 chr3R 10834390 10834432 -17070621 + AT_rich Low_complexity Low_complexity 1 42 0 4 667 34 0 0 0 chr3R 10834775 10834809 -17070244 + AT_rich Low_complexity Low_complexity 1 34 0 4 667 195 100 0 0 chr3R 10835309 10835339 -17069714 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 667 38 0 0 0 chr3R 10835959 10835997 -17069056 + AT_rich Low_complexity Low_complexity 1 38 0 4 667 23 78 0 0 chr3R 10836766 10836817 -17068236 + AT_rich Low_complexity Low_complexity 1 51 0 4 667 26 30 0 0 chr3R 10837193 10837226 -17067827 + AT_rich Low_complexity Low_complexity 1 33 0 4 667 23 68 0 0 chr3R 10839281 10839325 -17065728 + AT_rich Low_complexity Low_complexity 1 44 0 4 667 21 36 0 0 chr3R 10846854 10846882 -17058171 + AT_rich Low_complexity Low_complexity 1 28 0 4 667 216 0 0 0 chr3R 10847234 10847258 -17057795 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 667 23 33 0 0 chr3R 10848754 10848784 -17056269 + AT_rich Low_complexity Low_complexity 1 30 0 4 667 24 32 0 0 chr3R 10852138 10852169 -17052884 + AT_rich Low_complexity Low_complexity 1 31 0 4 667 207 0 0 0 chr3R 10852730 10852753 -17052300 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 667 225 65 0 0 chr3R 10856299 10856330 -17048723 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 667 26 0 0 0 chr3R 10856482 10856508 -17048545 + AT_rich Low_complexity Low_complexity 1 26 0 4 667 45 45 0 0 chr3R 10858135 10858201 -17046852 + AT_rich Low_complexity Low_complexity 1 66 0 4 667 22 56 0 0 chr3R 10863864 10863900 -17041153 + AT_rich Low_complexity Low_complexity 1 36 0 4 667 24 32 0 0 chr3R 10865577 10865608 -17039445 + AT_rich Low_complexity Low_complexity 1 31 0 4 667 21 0 0 0 chr3R 10866284 10866305 -17038748 + AT_rich Low_complexity Low_complexity 1 21 0 4 667 33 43 0 0 chr3R 10867120 10867167 -17037886 + AT_rich Low_complexity Low_complexity 1 47 0 4 667 32026 0 0 1 chr3R 10867204 10870905 -17034148 - DOC LINE Jockey -9 4716 1018 4 667 37 52 0 0 chr3R 10873684 10873742 -17031311 + AT_rich Low_complexity Low_complexity 1 58 0 4 667 34 72 0 0 chr3R 10877944 10878013 -17027040 + AT_rich Low_complexity Low_complexity 1 69 0 4 668 27 0 0 0 chr3R 10879992 10880019 -17025034 + AT_rich Low_complexity Low_complexity 1 27 0 4 668 25 31 0 0 chr3R 10880958 10880990 -17024063 + AT_rich Low_complexity Low_complexity 1 32 0 4 668 29 0 0 0 chr3R 10883517 10883546 -17021507 + AT_rich Low_complexity Low_complexity 1 29 0 4 668 23 68 0 0 chr3R 10883994 10884038 -17021015 + AT_rich Low_complexity Low_complexity 1 44 0 4 668 23 0 0 0 chr3R 10884088 10884111 -17020942 + AT_rich Low_complexity Low_complexity 1 23 0 4 668 795 19 0 0 chr3R 10885058 10885156 -17019897 + BS LINE Jockey 5001 5098 -28 4 668 186 71 0 0 chr3R 10885156 10885184 -17019869 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 4 668 25 0 0 0 chr3R 10889521 10889546 -17015507 + AT_rich Low_complexity Low_complexity 1 25 0 4 668 189 121 0 0 chr3R 10889929 10889962 -17015091 + (GGGA)n Simple_repeat Simple_repeat 2 34 0 4 668 180 111 0 0 chr3R 10893417 10893444 -17011609 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 668 24 32 0 0 chr3R 10893947 10893978 -17011075 + AT_rich Low_complexity Low_complexity 1 31 0 4 668 21 36 0 0 chr3R 10894736 10894764 -17010289 + AT_rich Low_complexity Low_complexity 1 28 0 4 668 22 35 0 0 chr3R 10894812 10894841 -17010212 + AT_rich Low_complexity Low_complexity 1 29 0 4 668 227 234 0 38 chr3R 10897246 10897326 -17007727 - ROO_I LTR Pao -7528 728 652 4 668 21 0 0 0 chr3R 10898475 10898496 -17006557 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 24 0 0 0 chr3R 10899711 10899735 -17005318 + AT_rich Low_complexity Low_complexity 1 24 0 4 668 1720 0 0 0 chr3R 10905582 10905768 -16999285 + POGON1 DNA Pogo 1 186 0 4 668 209 224 0 17 chr3R 10906830 10906889 -16998164 + (ATTG)n Simple_repeat Simple_repeat 2 59 0 4 668 21 57 0 0 chr3R 10909931 10909966 -16995087 + AT_rich Low_complexity Low_complexity 1 35 0 4 668 23 0 0 0 chr3R 10914377 10914400 -16990653 + AT_rich Low_complexity Low_complexity 1 23 0 4 668 205 224 20 20 chr3R 10915327 10915377 -16989676 + (CATA)n Simple_repeat Simple_repeat 1 50 0 4 668 27 29 0 0 chr3R 10917552 10917586 -16987467 + AT_rich Low_complexity Low_complexity 1 34 0 4 668 206 145 30 61 chr3R 10922296 10922362 -16982691 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 4 668 21 0 0 0 chr3R 10927932 10927953 -16977100 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 4458 4 0 0 chr3R 10928274 10928755 -16976298 - T412LTR LTR LTR 0 481 1 4 668 56111 1 1 3 chr3R 10928645 10934868 -16970185 - DM412 LTR Gypsy 0 6897 687 4 668 3909 11 0 11 chr3R 10934858 10935305 -16969748 - DM412 LTR Gypsy -6455 442 1 4 668 4458 4 0 0 chr3R 10934991 10935472 -16969581 - T412LTR LTR LTR 0 481 1 4 668 345 62 0 0 chr3R 10936629 10936677 -16968376 + (CAGT)n Simple_repeat Simple_repeat 3 50 0 4 668 183 80 0 0 chr3R 10937998 10938023 -16967030 + (CATTC)n Simple_repeat Simple_repeat 1 25 0 4 668 249 57 0 0 chr3R 10938138 10938173 -16966880 + (A)n Simple_repeat Simple_repeat 1 35 0 4 668 239 299 0 0 chr3R 10938197 10938264 -16966789 + (CAT)n Simple_repeat Simple_repeat 1 67 0 4 668 21 57 0 0 chr3R 10939554 10939589 -16965464 + AT_rich Low_complexity Low_complexity 1 35 0 4 668 201 254 0 0 chr3R 10941090 10941149 -16963904 + A-rich Low_complexity Low_complexity 1 59 0 4 668 204 40 0 0 chr3R 10942929 10942954 -16962099 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 4 668 216 0 0 0 chr3R 10945305 10945329 -16959724 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 668 189 154 0 0 chr3R 10948989 10949028 -16956025 + (TGAG)n Simple_repeat Simple_repeat 1 39 0 4 668 195 100 0 0 chr3R 10951171 10951201 -16953852 + (A)n Simple_repeat Simple_repeat 1 30 0 4 668 22 56 0 0 chr3R 10953544 10953580 -16951473 + AT_rich Low_complexity Low_complexity 1 36 0 4 668 24 32 0 0 chr3R 10953768 10953799 -16951254 + AT_rich Low_complexity Low_complexity 1 31 0 4 668 27 81 0 0 chr3R 10954663 10954725 -16950328 + AT_rich Low_complexity Low_complexity 1 62 0 4 668 213 298 0 34 chr3R 10955065 10955183 -16949870 + (TTG)n Simple_repeat Simple_repeat 2 115 0 4 668 258 216 26 39 chr3R 10956310 10956387 -16948666 + (TTTA)n Simple_repeat Simple_repeat 1 76 0 4 668 205 218 0 18 chr3R 10957125 10957181 -16947872 + T-rich Low_complexity Low_complexity 5 59 0 4 668 5486 0 0 4 chr3R 10957849 10958528 -16946525 - DOC6_DM LINE Jockey 0 4222 3547 4 668 19875 3 3 0 chr3R 10958508 10960827 -16944226 - DOC6_DM LINE Jockey -1898 2324 1 4 668 378 232 0 0 chr3R 10961870 10962034 -16943019 + (TTG)n Simple_repeat Simple_repeat 3 166 0 4 668 21 0 0 0 chr3R 10962271 10962292 -16942761 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 25 83 0 0 chr3R 10964691 10964751 -16940302 + AT_rich Low_complexity Low_complexity 1 60 0 4 668 474 186 122 0 chr3R 10965132 10965280 -16939773 - BURDOCK_I LTR Gypsy -1485 4375 4114 4 668 1480 64 0 5 chr3R 10965287 10965490 -16939563 + TC1-2_DM DNA Tc1 790 991 -653 4 668 448 79 40 0 chr3R 10965489 10965565 -16939488 + TC1-2_DM DNA Tc1 1566 1644 0 4 668 27 29 0 0 chr3R 10971295 10971329 -16933724 + AT_rich Low_complexity Low_complexity 1 34 0 4 668 204 97 0 0 chr3R 10972552 10972583 -16932470 + (CAA)n Simple_repeat Simple_repeat 2 32 0 4 668 23 33 0 0 chr3R 10973682 10973712 -16931341 + AT_rich Low_complexity Low_complexity 1 30 0 4 668 23 0 0 0 chr3R 10973968 10973991 -16931062 + AT_rich Low_complexity Low_complexity 1 23 0 4 668 27 29 0 0 chr3R 10974433 10974467 -16930586 + AT_rich Low_complexity Low_complexity 1 34 0 4 668 25 31 0 0 chr3R 10975635 10975667 -16929386 + AT_rich Low_complexity Low_complexity 1 32 0 4 668 24 0 0 0 chr3R 10976561 10976585 -16928468 + AT_rich Low_complexity Low_complexity 1 24 0 4 668 21 0 0 0 chr3R 10979638 10979659 -16925394 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 218 81 27 0 chr3R 10979924 10979961 -16925092 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 668 21 0 0 0 chr3R 10984878 10984899 -16920154 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 40582 1 0 0 chr3R 10988332 10993024 -16912029 - FW_DM LINE Jockey 0 4692 1 4 668 24 0 0 0 chr3R 10995591 10995615 -16909438 + AT_rich Low_complexity Low_complexity 1 24 0 4 668 202 182 0 35 chr3R 10996358 10996415 -16908638 + T-rich Low_complexity Low_complexity 5 59 0 4 668 23 54 0 0 chr3R 10997283 10997320 -16907733 + AT_rich Low_complexity Low_complexity 1 37 0 4 668 27 29 0 0 chr3R 10997849 10997883 -16907170 + AT_rich Low_complexity Low_complexity 1 34 0 4 668 204 40 0 0 chr3R 10998570 10998595 -16906458 + (TAG)n Simple_repeat Simple_repeat 2 26 0 4 668 26 64 0 0 chr3R 10998771 10998818 -16906235 + AT_rich Low_complexity Low_complexity 1 47 0 4 668 22 35 0 0 chr3R 11001201 11001230 -16903823 + AT_rich Low_complexity Low_complexity 1 29 0 4 668 189 154 0 0 chr3R 11001270 11001309 -16903744 + (TTG)n Simple_repeat Simple_repeat 1 39 0 4 668 23 0 0 0 chr3R 11001345 11001368 -16903685 + AT_rich Low_complexity Low_complexity 1 23 0 4 668 26 0 0 0 chr3R 11001781 11001807 -16903246 + AT_rich Low_complexity Low_complexity 1 26 0 4 668 22 0 0 0 chr3R 11002728 11002750 -16902303 + AT_rich Low_complexity Low_complexity 1 22 0 4 668 195 100 0 0 chr3R 11003262 11003292 -16901761 + (CGAAA)n Simple_repeat Simple_repeat 1 30 0 4 668 320 64 0 21 chr3R 11003488 11003536 -16901517 + (ACTG)n Simple_repeat Simple_repeat 4 50 0 4 668 34 0 0 0 chr3R 11003637 11003671 -16901382 + AT_rich Low_complexity Low_complexity 1 34 0 4 668 24 0 0 0 chr3R 11004969 11004993 -16900060 + AT_rich Low_complexity Low_complexity 1 24 0 4 668 211 260 0 25 chr3R 11005831 11005910 -16899143 + T-rich Low_complexity Low_complexity 5 81 0 4 668 230 193 0 17 chr3R 11007399 11007457 -16897596 + T-rich Low_complexity Low_complexity 4 60 0 4 668 28 29 0 0 chr3R 11007550 11007585 -16897468 + AT_rich Low_complexity Low_complexity 1 35 0 4 668 21 0 0 0 chr3R 11008008 11008029 -16897024 + AT_rich Low_complexity Low_complexity 1 21 0 4 668 223 233 0 0 chr3R 11008496 11008539 -16896514 + (TTGGGG)n Simple_repeat Simple_repeat 3 45 0 4 668 26 0 0 0 chr3R 11008857 11008883 -16896170 + AT_rich Low_complexity Low_complexity 1 26 0 4 668 22 0 0 0 chr3R 11009534 11009556 -16895497 + AT_rich Low_complexity Low_complexity 1 22 0 4 668 25 83 0 0 chr3R 11009974 11010034 -16895019 + AT_rich Low_complexity Low_complexity 1 60 0 4 669 22 56 0 0 chr3R 11011116 11011152 -16893901 + AT_rich Low_complexity Low_complexity 1 36 0 4 669 32 0 0 0 chr3R 11013497 11013529 -16891524 + AT_rich Low_complexity Low_complexity 1 32 0 4 669 204 40 0 0 chr3R 11015574 11015599 -16889454 + (CAG)n Simple_repeat Simple_repeat 3 27 0 4 669 231 304 0 0 chr3R 11031854 11031923 -16873130 + (TA)n Simple_repeat Simple_repeat 1 69 0 4 669 232 48 23 23 chr3R 11034238 11034281 -16870772 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 669 25 65 0 0 chr3R 11034679 11034725 -16870328 + AT_rich Low_complexity Low_complexity 1 46 0 4 669 21 0 0 0 chr3R 11044624 11044645 -16860408 + AT_rich Low_complexity Low_complexity 1 21 0 4 669 25 0 0 0 chr3R 11048077 11048102 -16856951 + AT_rich Low_complexity Low_complexity 1 25 0 4 669 28 0 0 0 chr3R 11048957 11048985 -16856068 + AT_rich Low_complexity Low_complexity 1 28 0 4 669 227 56 56 0 chr3R 11050174 11050210 -16854843 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 4 669 35 41 0 0 chr3R 11053175 11053224 -16851829 + AT_rich Low_complexity Low_complexity 1 49 0 4 669 39 0 0 0 chr3R 11066523 11066562 -16838491 + AT_rich Low_complexity Low_complexity 1 39 0 4 669 225 113 46 46 chr3R 11075460 11075525 -16829528 + (TTA)n Simple_repeat Simple_repeat 1 65 0 4 669 27 49 0 0 chr3R 11076373 11076414 -16828639 + AT_rich Low_complexity Low_complexity 1 41 0 4 669 24 53 0 0 chr3R 11077473 11077511 -16827542 + AT_rich Low_complexity Low_complexity 1 38 0 4 669 246 62 0 0 chr3R 11078718 11078750 -16826303 + (CAG)n Simple_repeat Simple_repeat 1 32 0 4 669 246 128 0 0 chr3R 11078958 11078997 -16826056 + (CAG)n Simple_repeat Simple_repeat 1 39 0 4 669 222 128 0 0 chr3R 11079110 11079149 -16825904 + (CAG)n Simple_repeat Simple_repeat 3 41 0 4 669 22 0 0 0 chr3R 11082789 11082811 -16822242 + AT_rich Low_complexity Low_complexity 1 22 0 4 669 21 36 0 0 chr3R 11085593 11085621 -16819432 + AT_rich Low_complexity Low_complexity 1 28 0 4 669 269 302 0 0 chr3R 11090571 11090677 -16814376 + GA-rich Low_complexity Low_complexity 2 107 0 4 669 230 100 40 0 chr3R 11091042 11091092 -16813961 + (TTAA)n Simple_repeat Simple_repeat 4 55 0 4 669 29 28 0 0 chr3R 11094244 11094280 -16810773 + AT_rich Low_complexity Low_complexity 1 36 0 4 669 234 250 0 0 chr3R 11096324 11096380 -16808673 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 4 669 22 0 0 0 chr3R 11105281 11105303 -16799750 + AT_rich Low_complexity Low_complexity 1 22 0 4 669 21 36 0 0 chr3R 11106790 11106818 -16798235 + AT_rich Low_complexity Low_complexity 1 28 0 4 669 186 43 0 0 chr3R 11108829 11108852 -16796201 + (TA)n Simple_repeat Simple_repeat 2 24 0 4 669 23 0 0 0 chr3R 11111238 11111261 -16793792 + AT_rich Low_complexity Low_complexity 1 23 0 4 669 206 227 0 0 chr3R 11112486 11112530 -16792523 + CT-rich Low_complexity Low_complexity 1 44 0 4 669 337 261 7 22 chr3R 11113246 11113383 -16791670 + (CAA)n Simple_repeat Simple_repeat 3 137 0 4 669 205 255 20 0 chr3R 11117382 11117433 -16787620 + CT-rich Low_complexity Low_complexity 1 52 0 4 669 288 77 0 0 chr3R 11118076 11118115 -16786938 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 669 201 147 0 0 chr3R 11122093 11122127 -16782926 + (CAA)n Simple_repeat Simple_repeat 2 35 0 4 669 202 206 0 0 chr3R 11122466 11122500 -16782553 + (CAA)n Simple_repeat Simple_repeat 2 35 0 4 669 237 108 0 0 chr3R 11122897 11122934 -16782119 + (ATG)n Simple_repeat Simple_repeat 1 37 0 4 669 23 92 0 0 chr3R 11123329 11123394 -16781659 + AT_rich Low_complexity Low_complexity 1 65 0 4 669 219 150 0 0 chr3R 11126918 11126958 -16778095 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 4 669 21 36 0 0 chr3R 11127105 11127133 -16777920 + AT_rich Low_complexity Low_complexity 1 28 0 4 669 270 56 0 0 chr3R 11128074 11128110 -16776943 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 669 200 59 0 29 chr3R 11130423 11130458 -16774595 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 4 669 204 106 64 0 chr3R 11130602 11130649 -16774404 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 4 669 236 298 0 0 chr3R 11131347 11131471 -16773582 + (CAG)n Simple_repeat Simple_repeat 2 125 0 4 669 217 233 0 0 chr3R 11132237 11132297 -16772756 + (CAG)n Simple_repeat Simple_repeat 2 61 0 4 669 362 287 0 0 chr3R 11132586 11132743 -16772310 + (CTG)n Simple_repeat Simple_repeat 1 157 0 4 669 253 186 353 0 chr3R 11134800 11134902 -16770151 + FB4_DM DNA Tc1 1 138 -3951 4 669 201 192 19 0 chr3R 11135224 11135276 -16769777 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 669 24 32 0 0 chr3R 11135331 11135362 -16769691 + AT_rich Low_complexity Low_complexity 1 31 0 4 669 228 150 50 0 chr3R 11137981 11138041 -16767012 + (TTATA)n Simple_repeat Simple_repeat 2 64 0 4 669 33 25 0 0 chr3R 11139510 11139550 -16765503 + AT_rich Low_complexity Low_complexity 1 40 0 4 669 213 65 0 0 chr3R 11139850 11139881 -16765172 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 669 21 57 0 0 chr3R 11140503 11140538 -16764515 + AT_rich Low_complexity Low_complexity 1 35 0 4 669 21 0 0 0 chr3R 11140605 11140626 -16764427 + AT_rich Low_complexity Low_complexity 1 21 0 4 669 22 80 0 0 chr3R 11140873 11140923 -16764130 + AT_rich Low_complexity Low_complexity 1 50 0 4 670 180 238 0 0 chr3R 11142858 11142921 -16762132 + (CAG)n Simple_repeat Simple_repeat 3 65 0 4 670 186 133 0 0 chr3R 11142952 11142982 -16762071 + (TGG)n Simple_repeat Simple_repeat 2 31 0 4 670 28 29 0 0 chr3R 11143955 11143990 -16761063 + AT_rich Low_complexity Low_complexity 1 35 0 4 670 334 264 0 26 chr3R 11148722 11148835 -16756218 + GA-rich Low_complexity Low_complexity 5 114 0 4 670 219 69 0 0 chr3R 11149709 11149738 -16755315 + (TAA)n Simple_repeat Simple_repeat 2 30 0 4 670 22 35 0 0 chr3R 11150352 11150381 -16754672 + AT_rich Low_complexity Low_complexity 1 29 0 4 670 22 35 0 0 chr3R 11150489 11150518 -16754535 + AT_rich Low_complexity Low_complexity 1 29 0 4 670 200 195 0 0 chr3R 11157830 11157871 -16747182 + CT-rich Low_complexity Low_complexity 3 43 0 4 670 224 316 6 62 chr3R 11157984 11158146 -16746907 + (CAT)n Simple_repeat Simple_repeat 3 155 0 4 670 21 36 0 0 chr3R 11182787 11182815 -16722238 + AT_rich Low_complexity Low_complexity 1 28 0 4 670 21 57 0 0 chr3R 11187478 11187513 -16717540 + AT_rich Low_complexity Low_complexity 1 35 0 4 670 21 0 0 0 chr3R 11188526 11188547 -16716506 + AT_rich Low_complexity Low_complexity 1 21 0 4 670 23 68 0 0 chr3R 11192721 11192765 -16712288 + AT_rich Low_complexity Low_complexity 1 44 0 4 670 23 0 0 0 chr3R 11194576 11194599 -16710454 + AT_rich Low_complexity Low_complexity 1 23 0 4 670 183 100 0 0 chr3R 11197959 11197989 -16707064 + (CTCTG)n Simple_repeat Simple_repeat 3 32 0 4 670 25 0 0 0 chr3R 11199832 11199857 -16705196 + AT_rich Low_complexity Low_complexity 1 25 0 4 670 246 278 0 27 chr3R 11201117 11201191 -16703862 + (CATA)n Simple_repeat Simple_repeat 1 72 0 4 670 203 200 22 0 chr3R 11201328 11201373 -16703680 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 670 210 37 0 0 chr3R 11201513 11201540 -16703513 + (CAG)n Simple_repeat Simple_repeat 1 27 0 4 670 250 299 11 22 chr3R 11201646 11201735 -16703318 + (CATATA)n Simple_repeat Simple_repeat 4 91 0 4 670 22 0 0 0 chr3R 11203779 11203801 -16701252 + AT_rich Low_complexity Low_complexity 1 22 0 4 670 238 196 0 0 chr3R 11204716 11204762 -16700291 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 670 243 103 0 0 chr3R 11205888 11205927 -16699126 + (CAT)n Simple_repeat Simple_repeat 1 39 0 4 670 21 36 0 0 chr3R 11206424 11206452 -16698601 + AT_rich Low_complexity Low_complexity 1 28 0 4 670 183 156 0 0 chr3R 11206630 11206662 -16698391 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 670 180 77 0 0 chr3R 11209040 11209066 -16695987 + (CGG)n Simple_repeat Simple_repeat 2 27 0 4 670 237 151 0 70 chr3R 11210736 11210793 -16694260 + (CGAAT)n Simple_repeat Simple_repeat 1 53 0 4 670 24 32 0 0 chr3R 11211708 11211739 -16693314 + AT_rich Low_complexity Low_complexity 1 31 0 4 670 202 192 39 0 chr3R 11212382 11212434 -16692619 + (TCTCTG)n Simple_repeat Simple_repeat 1 54 0 4 670 207 0 0 0 chr3R 11215111 11215134 -16689919 + (CTA)n Simple_repeat Simple_repeat 2 24 0 4 670 210 91 0 0 chr3R 11217234 11217267 -16687786 + (CAG)n Simple_repeat Simple_repeat 1 33 0 4 670 43 20 0 0 chr3R 11218851 11218901 -16686152 + AT_rich Low_complexity Low_complexity 1 50 0 4 670 26 0 0 0 chr3R 11219918 11219944 -16685109 + AT_rich Low_complexity Low_complexity 1 26 0 4 670 23 54 0 0 chr3R 11220960 11220997 -16684056 + AT_rich Low_complexity Low_complexity 1 37 0 4 670 21 57 0 0 chr3R 11221110 11221145 -16683908 + AT_rich Low_complexity Low_complexity 1 35 0 4 670 180 0 0 0 chr3R 11222631 11222651 -16682402 + (TC)n Simple_repeat Simple_repeat 2 21 0 4 670 200 135 0 26 chr3R 11222776 11222814 -16682239 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 670 213 65 0 0 chr3R 11223561 11223592 -16681461 + (TA)n Simple_repeat Simple_repeat 2 32 0 4 670 180 0 0 0 chr3R 11224710 11224730 -16680323 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 670 255 155 0 110 chr3R 11224863 11224972 -16680081 + ROO_I LTR Pao 640 736 -7520 4 670 180 0 0 0 chr3R 11225439 11225459 -16679594 + (CAG)n Simple_repeat Simple_repeat 3 22 0 4 670 188 167 0 20 chr3R 11225663 11225712 -16679341 + (TTA)n Simple_repeat Simple_repeat 1 48 0 4 670 219 36 0 0 chr3R 11225827 11225855 -16679198 + (ATATG)n Simple_repeat Simple_repeat 5 32 0 4 670 30 27 0 0 chr3R 11225877 11225914 -16679139 + AT_rich Low_complexity Low_complexity 1 37 0 4 670 231 227 12 62 chr3R 11226111 11226191 -16678862 + (CA)n Simple_repeat Simple_repeat 1 76 0 4 670 24 32 0 0 chr3R 11226396 11226427 -16678626 + AT_rich Low_complexity Low_complexity 1 31 0 4 670 214 242 0 16 chr3R 11227573 11227636 -16677417 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 670 202 306 0 0 chr3R 11227940 11228012 -16677041 + (CA)n Simple_repeat Simple_repeat 2 73 0 4 670 23 68 0 0 chr3R 11228276 11228320 -16676733 + AT_rich Low_complexity Low_complexity 1 44 0 4 670 189 196 0 0 chr3R 11235422 11235473 -16669580 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 670 456 128 0 0 chr3R 11239531 11239609 -16665444 + (CAG)n Simple_repeat Simple_repeat 1 78 0 4 670 265 144 0 168 chr3R 11239734 11239859 -16665194 + ROO_I LTR Pao 640 743 -7513 4 670 275 319 0 0 chr3R 11239930 11240090 -16664963 + (CAG)n Simple_repeat Simple_repeat 1 160 0 4 670 204 143 0 0 chr3R 11242232 11242274 -16662779 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 670 24 53 0 0 chr3R 11242942 11242980 -16662073 + AT_rich Low_complexity Low_complexity 1 38 0 4 670 205 80 38 57 chr3R 11242980 11243033 -16662020 + A-rich Low_complexity Low_complexity 4 55 0 4 670 234 45 22 43 chr3R 11243577 11243623 -16661430 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 670 242 271 0 0 chr3R 11243750 11243820 -16661233 + (TG)n Simple_repeat Simple_repeat 2 71 0 4 670 213 220 0 0 chr3R 11243944 11243994 -16661059 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 670 293 82 20 0 chr3R 11246470 11246519 -16658534 + (GA)n Simple_repeat Simple_repeat 2 51 0 4 670 249 33 0 0 chr3R 11247593 11247623 -16657430 + (CGATA)n Simple_repeat Simple_repeat 2 31 0 4 670 198 143 0 0 chr3R 11248051 11248086 -16656967 + (TTG)n Simple_repeat Simple_repeat 2 36 0 4 670 225 196 0 0 chr3R 11248520 11248576 -16656477 + (TTG)n Simple_repeat Simple_repeat 1 56 0 4 670 258 116 0 0 chr3R 11248938 11248981 -16656072 + (TTG)n Simple_repeat Simple_repeat 1 43 0 4 670 198 160 0 0 chr3R 11249839 11249889 -16655164 + (CTG)n Simple_repeat Simple_repeat 1 50 0 4 670 342 231 0 28 chr3R 11249983 11250090 -16654963 - ROO_I LTR Pao -7512 744 641 4 670 398 86 0 41 chr3R 11250185 11250258 -16654795 + (CTG)n Simple_repeat Simple_repeat 1 70 0 4 670 180 111 0 0 chr3R 11251723 11251750 -16653303 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 670 31 0 0 0 chr3R 11252412 11252443 -16652610 + AT_rich Low_complexity Low_complexity 1 31 0 4 670 22 35 0 0 chr3R 11252502 11252531 -16652522 + AT_rich Low_complexity Low_complexity 1 29 0 4 670 235 204 0 36 chr3R 11253004 11253060 -16651993 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 4 670 260 225 14 0 chr3R 11253151 11253222 -16651831 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 670 219 36 0 0 chr3R 11255373 11255401 -16649652 + (TGGA)n Simple_repeat Simple_repeat 1 28 0 4 670 309 256 0 0 chr3R 11255583 11255665 -16649388 + (CAT)n Simple_repeat Simple_repeat 2 83 0 4 670 204 40 0 0 chr3R 11258945 11258970 -16646083 + (TA)n Simple_repeat Simple_repeat 1 25 0 4 670 228 224 0 0 chr3R 11259295 11259344 -16645709 + (CAGAGA)n Simple_repeat Simple_repeat 2 50 0 4 670 26 0 0 0 chr3R 11260998 11261024 -16644029 + AT_rich Low_complexity Low_complexity 1 26 0 4 670 21 36 0 0 chr3R 11262301 11262329 -16642724 + AT_rich Low_complexity Low_complexity 1 28 0 4 670 190 136 22 22 chr3R 11262784 11262829 -16642224 + (CAG)n Simple_repeat Simple_repeat 3 47 0 4 670 181 111 21 43 chr3R 11263127 11263174 -16641879 + (CATA)n Simple_repeat Simple_repeat 1 46 0 4 670 288 253 0 25 chr3R 11263370 11263451 -16641602 + (TGG)n Simple_repeat Simple_repeat 3 81 0 4 670 21 36 0 0 chr3R 11264123 11264151 -16640902 + AT_rich Low_complexity Low_complexity 1 28 0 4 670 23 33 0 0 chr3R 11267874 11267904 -16637149 + AT_rich Low_complexity Low_complexity 1 30 0 4 670 25 0 0 0 chr3R 11268436 11268461 -16636592 + AT_rich Low_complexity Low_complexity 1 25 0 4 670 21 0 0 0 chr3R 11268692 11268713 -16636340 + AT_rich Low_complexity Low_complexity 1 21 0 4 670 24 32 0 0 chr3R 11271786 11271817 -16633236 + AT_rich Low_complexity Low_complexity 1 31 0 4 671 207 184 26 0 chr3R 11276030 11276068 -16628985 + (CAGC)n Simple_repeat Simple_repeat 3 41 0 4 671 207 139 0 0 chr3R 11279430 11279466 -16625587 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 671 339 78 0 0 chr3R 11283275 11283326 -16621727 + (CAGT)n Simple_repeat Simple_repeat 4 54 0 4 671 256 232 0 24 chr3R 11285244 11285328 -16619725 + T-rich Low_complexity Low_complexity 3 84 0 4 671 186 43 0 0 chr3R 11285757 11285780 -16619273 + (A)n Simple_repeat Simple_repeat 1 23 0 4 671 23 33 0 0 chr3R 11287337 11287367 -16617686 + AT_rich Low_complexity Low_complexity 1 30 0 4 671 288 70 0 0 chr3R 11289333 11289376 -16615677 + (CAG)n Simple_repeat Simple_repeat 2 44 0 4 671 192 40 0 0 chr3R 11289982 11290007 -16615046 + (T)n Simple_repeat Simple_repeat 1 25 0 4 671 21 57 0 0 chr3R 11290484 11290519 -16614534 + AT_rich Low_complexity Low_complexity 1 35 0 4 671 21 36 0 0 chr3R 11291860 11291888 -16613165 + AT_rich Low_complexity Low_complexity 1 28 0 4 671 228 86 0 0 chr3R 11292239 11292274 -16612779 + (CGAT)n Simple_repeat Simple_repeat 2 36 0 4 671 228 35 0 0 chr3R 11292445 11292474 -16612579 + (T)n Simple_repeat Simple_repeat 1 29 0 4 671 235 246 0 0 chr3R 11294155 11294212 -16610841 + T-rich Low_complexity Low_complexity 1 57 0 4 671 270 243 0 0 chr3R 11298838 11298912 -16606141 + A-rich Low_complexity Low_complexity 1 74 0 4 671 213 196 0 0 chr3R 11299371 11299417 -16605636 + (CAGC)n Simple_repeat Simple_repeat 2 47 0 4 671 255 61 0 0 chr3R 11300258 11300291 -16604762 + (AAATG)n Simple_repeat Simple_repeat 3 35 0 4 671 216 158 0 0 chr3R 11302051 11302089 -16602964 + (CATA)n Simple_repeat Simple_repeat 4 41 0 4 671 32 0 0 0 chr3R 11302418 11302450 -16602603 + AT_rich Low_complexity Low_complexity 1 32 0 4 671 204 150 0 24 chr3R 11303798 11303839 -16601214 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 4 671 216 0 0 0 chr3R 11304995 11305019 -16600034 + (TA)n Simple_repeat Simple_repeat 1 24 0 4 671 23 78 0 0 chr3R 11306309 11306360 -16598693 + AT_rich Low_complexity Low_complexity 1 51 0 4 671 387 157 0 0 chr3R 11306690 11306760 -16598293 + (ACTG)n Simple_repeat Simple_repeat 1 70 0 4 671 24 53 0 0 chr3R 11310364 11310402 -16594651 + AT_rich Low_complexity Low_complexity 1 38 0 4 671 21 71 0 0 chr3R 11319215 11319257 -16585796 + AT_rich Low_complexity Low_complexity 1 42 0 4 671 213 39 0 0 chr3R 11324138 11324164 -16580889 + (T)n Simple_repeat Simple_repeat 1 26 0 4 671 33 25 0 0 chr3R 11333091 11333131 -16571922 + AT_rich Low_complexity Low_complexity 1 40 0 4 671 258 143 0 0 chr3R 11337368 11337417 -16567636 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 671 204 111 0 0 chr3R 11341481 11341517 -16563536 + (ATG)n Simple_repeat Simple_repeat 1 36 0 4 671 240 149 0 0 chr3R 11343182 11343229 -16561824 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 671 291 54 0 0 chr3R 11351240 11351277 -16553776 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 671 23 0 0 0 chr3R 11352799 11352822 -16552231 + AT_rich Low_complexity Low_complexity 1 23 0 4 671 21 36 0 0 chr3R 11355802 11355830 -16549223 + AT_rich Low_complexity Low_complexity 1 28 0 4 671 203 158 0 0 chr3R 11356036 11356074 -16548979 + (CTG)n Simple_repeat Simple_repeat 2 39 0 4 671 21 36 0 0 chr3R 11360796 11360824 -16544229 + AT_rich Low_complexity Low_complexity 1 28 0 4 671 32 81 0 0 chr3R 11366610 11366684 -16538369 + AT_rich Low_complexity Low_complexity 1 74 0 4 671 282 106 0 0 chr3R 11381664 11381711 -16523342 + (ATTCG)n Simple_repeat Simple_repeat 3 49 0 4 671 195 42 0 0 chr3R 11386604 11386628 -16518425 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 671 249 128 0 0 chr3R 11388494 11388541 -16516512 + (CTG)n Simple_repeat Simple_repeat 3 49 0 4 671 250 224 0 0 chr3R 11391596 11391645 -16513408 + (CAG)n Simple_repeat Simple_repeat 2 50 0 4 671 225 281 0 50 chr3R 11392649 11392750 -16512303 + (CAA)n Simple_repeat Simple_repeat 2 97 0 4 671 21 0 0 0 chr3R 11392898 11392919 -16512134 + AT_rich Low_complexity Low_complexity 1 21 0 4 671 188 182 23 0 chr3R 11393950 11393994 -16511059 + (CGGAA)n Simple_repeat Simple_repeat 2 46 0 4 671 183 80 0 0 chr3R 11394853 11394878 -16510175 + (ATG)n Simple_repeat Simple_repeat 1 25 0 4 671 273 57 0 0 chr3R 11395539 11395574 -16509479 + (TGAG)n Simple_repeat Simple_repeat 3 37 0 4 671 180 0 0 0 chr3R 11395663 11395683 -16509370 + (TATG)n Simple_repeat Simple_repeat 1 20 0 4 671 189 107 0 0 chr3R 11396436 11396464 -16508589 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 672 22 0 0 0 chr3R 11404715 11404737 -16500316 + AT_rich Low_complexity Low_complexity 1 22 0 4 672 24 0 0 0 chr3R 11409691 11409715 -16495338 + AT_rich Low_complexity Low_complexity 1 24 0 4 672 191 105 0 50 chr3R 11414728 11414768 -16490285 + (TTTCG)n Simple_repeat Simple_repeat 3 40 0 4 672 23 33 0 0 chr3R 11421053 11421083 -16483970 + AT_rich Low_complexity Low_complexity 1 30 0 4 672 24 32 0 0 chr3R 11422369 11422400 -16482653 + AT_rich Low_complexity Low_complexity 1 31 0 4 672 24 53 0 0 chr3R 11424266 11424304 -16480749 + AT_rich Low_complexity Low_complexity 1 38 0 4 672 207 0 0 0 chr3R 11426712 11426735 -16478318 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 672 4378 8 0 2 chr3R 11426940 11427422 -16477631 - T412LTR LTR LTR 0 481 1 4 672 62131 1 0 4 chr3R 11427312 11434238 -16470815 - DM412 LTR Gypsy 0 6897 1 4 672 4378 8 0 2 chr3R 11433923 11434405 -16470648 - T412LTR LTR LTR 0 481 1 4 672 22 0 0 0 chr3R 11436373 11436395 -16468658 + AT_rich Low_complexity Low_complexity 1 22 0 4 672 24 32 0 0 chr3R 11439129 11439160 -16465893 + AT_rich Low_complexity Low_complexity 1 31 0 4 672 26 30 0 0 chr3R 11442339 11442372 -16462681 + AT_rich Low_complexity Low_complexity 1 33 0 4 672 31 0 0 0 chr3R 11443030 11443061 -16461992 + AT_rich Low_complexity Low_complexity 1 31 0 4 672 3427 5 45 0 chr3R 11444507 11444675 -16460378 + BLOOD_LTR LTR Gypsy 1 168 -231 4 672 180 0 0 0 chr3R 11444675 11444695 -16460358 + (TC)n Simple_repeat Simple_repeat 2 21 0 4 672 3427 5 45 0 chr3R 11444695 11444908 -16460145 + BLOOD_LTR LTR Gypsy 169 397 -2 4 672 60230 1 0 0 chr3R 11444908 11451523 -16453530 + BLOOD_I LTR Gypsy 1 6613 0 4 672 3427 5 45 0 chr3R 11451523 11451691 -16453362 + BLOOD_LTR LTR Gypsy 1 168 -231 4 672 180 0 0 0 chr3R 11451691 11451711 -16453342 + (TC)n Simple_repeat Simple_repeat 2 21 0 4 672 3427 5 45 0 chr3R 11451711 11451924 -16453129 + BLOOD_LTR LTR Gypsy 169 397 -2 4 672 191 36 36 0 chr3R 11457115 11457143 -16447910 + (CAGAC)n Simple_repeat Simple_repeat 5 33 0 4 672 237 83 0 0 chr3R 11460367 11460403 -16444650 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 4 672 25 31 0 0 chr3R 11462246 11462278 -16442775 + AT_rich Low_complexity Low_complexity 1 32 0 4 672 22 0 0 0 chr3R 11463960 11463982 -16441071 + AT_rich Low_complexity Low_complexity 1 22 0 4 672 249 119 0 0 chr3R 11472062 11472104 -16432949 + (CAT)n Simple_repeat Simple_repeat 1 42 0 4 672 22 56 0 0 chr3R 11474336 11474372 -16430681 + AT_rich Low_complexity Low_complexity 1 36 0 4 672 27 29 0 0 chr3R 11475077 11475111 -16429942 + AT_rich Low_complexity Low_complexity 1 34 0 4 672 183 80 0 0 chr3R 11476029 11476054 -16428999 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 4 672 21 0 0 0 chr3R 11476143 11476164 -16428889 + AT_rich Low_complexity Low_complexity 1 21 0 4 672 40 0 0 0 chr3R 11478563 11478603 -16426450 + AT_rich Low_complexity Low_complexity 1 40 0 4 672 204 97 0 0 chr3R 11483525 11483556 -16421497 + (CAACT)n Simple_repeat Simple_repeat 1 31 0 4 672 33 73 0 0 chr3R 11490149 11490217 -16414836 + AT_rich Low_complexity Low_complexity 1 68 0 4 672 206 118 0 0 chr3R 11490624 11490658 -16414395 + (GA)n Simple_repeat Simple_repeat 1 34 0 4 672 201 83 0 53 chr3R 11495831 11495869 -16409184 + (GGATG)n Simple_repeat Simple_repeat 2 37 0 4 672 198 0 0 0 chr3R 11496226 11496248 -16408805 + (CAATT)n Simple_repeat Simple_repeat 4 25 0 4 672 228 135 0 0 chr3R 11500561 11500598 -16404455 + (CTG)n Simple_repeat Simple_repeat 1 37 0 4 672 225 0 0 0 chr3R 11501744 11501769 -16403284 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 672 21 0 0 0 chr3R 11501852 11501873 -16403180 + AT_rich Low_complexity Low_complexity 1 21 0 4 672 24 32 0 0 chr3R 11507290 11507321 -16397732 + AT_rich Low_complexity Low_complexity 1 31 0 4 672 223 205 0 0 chr3R 11516786 11516825 -16388228 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 672 22 35 0 0 chr3R 11525266 11525295 -16379758 + AT_rich Low_complexity Low_complexity 1 29 0 4 672 23 0 0 0 chr3R 11531121 11531144 -16373909 + AT_rich Low_complexity Low_complexity 1 23 0 4 672 25 0 0 0 chr3R 11531864 11531889 -16373164 + AT_rich Low_complexity Low_complexity 1 25 0 4 672 28 0 0 0 chr3R 11532258 11532286 -16372767 + AT_rich Low_complexity Low_complexity 1 28 0 4 672 198 128 0 0 chr3R 11533642 11533681 -16371372 + (CAG)n Simple_repeat Simple_repeat 2 40 0 4 673 22 70 0 0 chr3R 11535271 11535314 -16369739 + AT_rich Low_complexity Low_complexity 1 43 0 4 673 21 71 0 0 chr3R 11535444 11535486 -16369567 + AT_rich Low_complexity Low_complexity 1 42 0 4 673 21 0 0 0 chr3R 11536475 11536496 -16368557 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 216 111 0 0 chr3R 11537040 11537076 -16367977 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 673 22 35 0 0 chr3R 11541589 11541618 -16363435 + AT_rich Low_complexity Low_complexity 1 29 0 4 673 40 21 0 0 chr3R 11541778 11541825 -16363228 + AT_rich Low_complexity Low_complexity 1 47 0 4 673 22 0 0 0 chr3R 11543058 11543080 -16361973 + AT_rich Low_complexity Low_complexity 1 22 0 4 673 21 0 0 0 chr3R 11544077 11544098 -16360955 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 21 36 0 0 chr3R 11544872 11544900 -16360153 + AT_rich Low_complexity Low_complexity 1 28 0 4 673 23 0 0 0 chr3R 11544991 11545014 -16360039 + AT_rich Low_complexity Low_complexity 1 23 0 4 673 183 42 0 0 chr3R 11545472 11545496 -16359557 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 673 192 77 0 0 chr3R 11545545 11545571 -16359482 + (ATG)n Simple_repeat Simple_repeat 1 26 0 4 673 25 0 0 0 chr3R 11545637 11545662 -16359391 + AT_rich Low_complexity Low_complexity 1 25 0 4 673 246 62 0 0 chr3R 11546230 11546262 -16358791 + (ATG)n Simple_repeat Simple_repeat 3 34 0 4 673 21 0 0 0 chr3R 11548541 11548562 -16356491 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 21 0 0 0 chr3R 11550331 11550352 -16354701 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 31 0 0 0 chr3R 11552362 11552393 -16352660 + AT_rich Low_complexity Low_complexity 1 31 0 4 673 23 0 0 0 chr3R 11552489 11552512 -16352541 + AT_rich Low_complexity Low_complexity 1 23 0 4 673 25 31 0 0 chr3R 11554144 11554176 -16350877 + AT_rich Low_complexity Low_complexity 1 32 0 4 673 27 0 0 0 chr3R 11554624 11554651 -16350402 + AT_rich Low_complexity Low_complexity 1 27 0 4 673 25 31 0 0 chr3R 11555045 11555077 -16349976 + AT_rich Low_complexity Low_complexity 1 32 0 4 673 252 59 0 0 chr3R 11556352 11556386 -16348667 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 673 22 0 0 0 chr3R 11557480 11557502 -16347551 + AT_rich Low_complexity Low_complexity 1 22 0 4 673 22 0 0 0 chr3R 11559081 11559103 -16345950 + AT_rich Low_complexity Low_complexity 1 22 0 4 673 43267 1 0 0 chr3R 11560980 11565672 -16339381 - FW_DM LINE Jockey 0 4692 1 4 673 23 0 0 0 chr3R 11568139 11568162 -16336891 + AT_rich Low_complexity Low_complexity 1 23 0 4 673 21 71 0 0 chr3R 11568859 11568901 -16336152 + AT_rich Low_complexity Low_complexity 1 42 0 4 673 189 0 0 0 chr3R 11569899 11569920 -16335133 + (CATA)n Simple_repeat Simple_repeat 3 23 0 4 673 37 23 0 0 chr3R 11570804 11570848 -16334205 + AT_rich Low_complexity Low_complexity 1 44 0 4 673 229 221 88 0 chr3R 11571518 11571586 -16333467 + R2B_DM LINE R2 1911 1984 -1544 4 673 28 48 0 0 chr3R 11572974 11573016 -16332037 + AT_rich Low_complexity Low_complexity 1 42 0 4 673 216 0 0 0 chr3R 11575587 11575611 -16329442 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 4 673 23 0 0 0 chr3R 11580091 11580114 -16324939 + AT_rich Low_complexity Low_complexity 1 23 0 4 673 210 150 0 0 chr3R 11581352 11581392 -16323661 + (TTGG)n Simple_repeat Simple_repeat 3 42 0 4 673 223 250 0 29 chr3R 11583583 11583653 -16321400 + A-rich Low_complexity Low_complexity 5 72 0 4 673 198 0 0 0 chr3R 11586028 11586050 -16319003 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 673 207 0 0 0 chr3R 11586248 11586271 -16318782 + (GAATG)n Simple_repeat Simple_repeat 3 25 0 4 673 30 0 0 0 chr3R 11587835 11587865 -16317188 + AT_rich Low_complexity Low_complexity 1 30 0 4 673 244 167 0 18 chr3R 11588011 11588066 -16316987 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 4 673 21 0 0 0 chr3R 11589211 11589232 -16315821 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 192 40 0 0 chr3R 11594035 11594060 -16310993 + (TTTAA)n Simple_repeat Simple_repeat 3 27 0 4 673 39 68 0 0 chr3R 11594461 11594535 -16310518 + AT_rich Low_complexity Low_complexity 1 74 0 4 673 195 42 0 0 chr3R 11594866 11594890 -16310163 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 673 30 27 0 0 chr3R 11596224 11596261 -16308792 + AT_rich Low_complexity Low_complexity 1 37 0 4 673 627 192 97 46 chr3R 11596811 11596986 -16308067 + DNAREP1_DM LINE Penelope 390 573 -21 4 673 237 108 0 0 chr3R 11598954 11598991 -16306062 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 673 21 36 0 0 chr3R 11599803 11599831 -16305222 + AT_rich Low_complexity Low_complexity 1 28 0 4 673 24 0 0 0 chr3R 11603439 11603463 -16301590 + AT_rich Low_complexity Low_complexity 1 24 0 4 673 28 0 0 0 chr3R 11604228 11604256 -16300797 + AT_rich Low_complexity Low_complexity 1 28 0 4 673 21 57 0 0 chr3R 11605208 11605243 -16299810 + AT_rich Low_complexity Low_complexity 1 35 0 4 673 203 171 0 0 chr3R 11609861 11609902 -16295151 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 673 207 338 0 0 chr3R 11610490 11610570 -16294483 + (TA)n Simple_repeat Simple_repeat 2 81 0 4 673 21 57 0 0 chr3R 11612327 11612362 -16292691 + AT_rich Low_complexity Low_complexity 1 35 0 4 673 30 27 0 0 chr3R 11617330 11617367 -16287686 + AT_rich Low_complexity Low_complexity 1 37 0 4 673 21 36 0 0 chr3R 11618195 11618223 -16286830 + AT_rich Low_complexity Low_complexity 1 28 0 4 673 27 0 0 0 chr3R 11619230 11619257 -16285796 + AT_rich Low_complexity Low_complexity 1 27 0 4 673 210 128 0 0 chr3R 11625305 11625344 -16279709 + (TAA)n Simple_repeat Simple_repeat 2 40 0 4 673 195 69 0 0 chr3R 11627641 11627670 -16277383 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 4 673 180 0 0 0 chr3R 11631891 11631911 -16273142 + (ATG)n Simple_repeat Simple_repeat 3 22 0 4 673 21 0 0 0 chr3R 11632373 11632394 -16272659 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 1400 46 22 15 chr3R 11635852 11636125 -16268928 + (TTATA)n Simple_repeat Simple_repeat 1 275 0 4 673 21 0 0 0 chr3R 11640859 11640880 -16264173 + AT_rich Low_complexity Low_complexity 1 21 0 4 673 24 32 0 0 chr3R 11642834 11642865 -16262188 + AT_rich Low_complexity Low_complexity 1 31 0 4 673 23 33 0 0 chr3R 11651142 11651172 -16253881 + AT_rich Low_complexity Low_complexity 1 30 0 4 673 22 0 0 0 chr3R 11659089 11659111 -16245942 + AT_rich Low_complexity Low_complexity 1 22 0 4 673 23 0 0 0 chr3R 11660248 11660271 -16244782 + AT_rich Low_complexity Low_complexity 1 23 0 4 673 26 0 0 0 chr3R 11660452 11660478 -16244575 + AT_rich Low_complexity Low_complexity 1 26 0 4 673 24 0 0 0 chr3R 11661707 11661731 -16243322 + AT_rich Low_complexity Low_complexity 1 24 0 4 673 25 102 0 0 chr3R 11662906 11662994 -16242059 + AT_rich Low_complexity Low_complexity 1 88 0 4 673 28 0 0 0 chr3R 11663830 11663858 -16241195 + AT_rich Low_complexity Low_complexity 1 28 0 4 674 24 32 0 0 chr3R 11674403 11674434 -16230619 + AT_rich Low_complexity Low_complexity 1 31 0 4 674 21 57 0 0 chr3R 11674796 11674831 -16230222 + AT_rich Low_complexity Low_complexity 1 35 0 4 674 271 141 15 15 chr3R 11678794 11678859 -16226194 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 674 205 29 59 0 chr3R 11679142 11679176 -16225877 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 674 21 0 0 0 chr3R 11687678 11687699 -16217354 + AT_rich Low_complexity Low_complexity 1 21 0 4 674 26 0 0 0 chr3R 11687709 11687735 -16217318 + AT_rich Low_complexity Low_complexity 1 26 0 4 674 27 0 0 0 chr3R 11688661 11688688 -16216365 + AT_rich Low_complexity Low_complexity 1 27 0 4 674 23 0 0 0 chr3R 11696864 11696887 -16208166 + AT_rich Low_complexity Low_complexity 1 23 0 4 674 480 183 38 19 chr3R 11697480 11697586 -16207467 + DNAREP1_DM LINE Penelope 3 110 -484 4 674 522 84 0 0 chr3R 11697760 11697831 -16207222 + DNAREP1_DM LINE Penelope 524 594 0 4 674 21 36 0 0 chr3R 11698205 11698233 -16206820 + AT_rich Low_complexity Low_complexity 1 28 0 4 674 240 226 0 31 chr3R 11701563 11701627 -16203426 + (CGG)n Simple_repeat Simple_repeat 1 62 0 4 674 24 32 0 0 chr3R 11701654 11701685 -16203368 + AT_rich Low_complexity Low_complexity 1 31 0 4 674 35 0 0 0 chr3R 11706811 11706846 -16198207 + AT_rich Low_complexity Low_complexity 1 35 0 4 674 27 29 0 0 chr3R 11711195 11711229 -16193824 + AT_rich Low_complexity Low_complexity 1 34 0 4 674 23 0 0 0 chr3R 11714684 11714707 -16190346 + AT_rich Low_complexity Low_complexity 1 23 0 4 674 24 0 0 0 chr3R 11715391 11715415 -16189638 + AT_rich Low_complexity Low_complexity 1 24 0 4 674 204 67 0 0 chr3R 11725821 11725851 -16179202 + (CAGG)n Simple_repeat Simple_repeat 3 32 0 4 674 22 56 0 0 chr3R 11726245 11726281 -16178772 + AT_rich Low_complexity Low_complexity 1 36 0 4 674 21 36 0 0 chr3R 11731566 11731594 -16173459 + AT_rich Low_complexity Low_complexity 1 28 0 4 674 27 29 0 0 chr3R 11732532 11732566 -16172487 + AT_rich Low_complexity Low_complexity 1 34 0 4 674 21 36 0 0 chr3R 11733758 11733786 -16171267 + AT_rich Low_complexity Low_complexity 1 28 0 4 674 27 29 0 0 chr3R 11734724 11734758 -16170295 + AT_rich Low_complexity Low_complexity 1 34 0 4 674 250 268 0 0 chr3R 11736617 11736688 -16168365 + (CTG)n Simple_repeat Simple_repeat 1 71 0 4 674 203 290 0 0 chr3R 11737051 11737120 -16167933 + (CTG)n Simple_repeat Simple_repeat 2 70 0 4 674 220 141 0 45 chr3R 11737336 11737403 -16167650 + (CTG)n Simple_repeat Simple_repeat 3 66 0 4 674 206 218 0 0 chr3R 11738440 11738495 -16166558 + CT-rich Low_complexity Low_complexity 2 56 0 4 674 205 204 19 0 chr3R 11738993 11739047 -16166006 + (TGG)n Simple_repeat Simple_repeat 2 56 0 4 674 272 165 9 134 chr3R 11739123 11739235 -16165818 - ROO_I LTR Pao -7516 740 643 4 674 218 259 0 0 chr3R 11739315 11739369 -16165684 + (CTG)n Simple_repeat Simple_repeat 2 55 0 4 674 24 53 0 0 chr3R 11743034 11743072 -16161981 + AT_rich Low_complexity Low_complexity 1 38 0 4 674 191 218 18 0 chr3R 11744893 11744948 -16160105 + (CAA)n Simple_repeat Simple_repeat 2 57 0 4 674 189 0 0 0 chr3R 11746733 11746754 -16158299 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 674 21 36 0 0 chr3R 11748551 11748579 -16156474 + AT_rich Low_complexity Low_complexity 1 28 0 4 674 21 0 0 0 chr3R 11748813 11748834 -16156219 + AT_rich Low_complexity Low_complexity 1 21 0 4 674 183 129 0 0 chr3R 11749448 11749479 -16155574 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 674 207 0 0 0 chr3R 11750355 11750378 -16154675 + (TA)n Simple_repeat Simple_repeat 2 24 0 4 674 244 237 26 26 chr3R 11752611 11752689 -16152364 + ROO_I LTR Pao 676 753 -7503 4 674 21 36 0 0 chr3R 11755532 11755560 -16149493 + AT_rich Low_complexity Low_complexity 1 28 0 4 674 21 57 0 0 chr3R 11759481 11759516 -16145537 + AT_rich Low_complexity Low_complexity 1 35 0 4 674 195 100 0 0 chr3R 11763191 11763221 -16141832 + (TCG)n Simple_repeat Simple_repeat 2 31 0 4 674 22 0 0 0 chr3R 11764575 11764597 -16140456 + AT_rich Low_complexity Low_complexity 1 22 0 4 674 183 80 0 0 chr3R 11764779 11764804 -16140249 + (AACTG)n Simple_repeat Simple_repeat 4 28 0 4 674 22 0 0 0 chr3R 11765915 11765937 -16139116 + AT_rich Low_complexity Low_complexity 1 22 0 4 674 214 191 0 0 chr3R 11768638 11768680 -16136373 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 4 674 213 94 0 0 chr3R 11769500 11769532 -16135521 + (CTG)n Simple_repeat Simple_repeat 1 32 0 4 674 28 48 0 0 chr3R 11776276 11776318 -16128735 + AT_rich Low_complexity Low_complexity 1 42 0 4 674 204 40 0 0 chr3R 11780197 11780222 -16124831 + (TTTAG)n Simple_repeat Simple_repeat 4 28 0 4 674 240 35 0 0 chr3R 11781056 11781085 -16123968 + (TCTA)n Simple_repeat Simple_repeat 4 32 0 4 674 21 57 0 0 chr3R 11782698 11782733 -16122320 + AT_rich Low_complexity Low_complexity 1 35 0 4 674 22 35 0 0 chr3R 11782786 11782815 -16122238 + AT_rich Low_complexity Low_complexity 1 29 0 4 674 204 236 26 79 chr3R 11783327 11783479 -16121574 + A-rich Low_complexity Low_complexity 2 145 0 4 674 25 0 0 0 chr3R 11784318 11784343 -16120710 + AT_rich Low_complexity Low_complexity 1 25 0 4 674 227 146 18 0 chr3R 11786065 11786120 -16118933 + (TA)n Simple_repeat Simple_repeat 1 56 0 4 674 23 54 0 0 chr3R 11786151 11786188 -16118865 + AT_rich Low_complexity Low_complexity 1 37 0 4 674 21 0 0 0 chr3R 11787085 11787106 -16117947 + AT_rich Low_complexity Low_complexity 1 21 0 4 674 30 27 0 0 chr3R 11787168 11787205 -16117848 + AT_rich Low_complexity Low_complexity 1 37 0 4 674 23 54 0 0 chr3R 11793757 11793794 -16111259 + AT_rich Low_complexity Low_complexity 1 37 0 4 674 279 298 0 0 chr3R 11794507 11794631 -16110422 + (CTG)n Simple_repeat Simple_repeat 3 126 0 4 675 206 81 27 0 chr3R 11799725 11799762 -16105291 + (GA)n Simple_repeat Simple_repeat 2 39 0 4 675 24 32 0 0 chr3R 11800926 11800957 -16104096 + AT_rich Low_complexity Low_complexity 1 31 0 4 675 25 51 0 0 chr3R 11802855 11802894 -16102159 + AT_rich Low_complexity Low_complexity 1 39 0 4 675 24 32 0 0 chr3R 11808255 11808286 -16096767 + AT_rich Low_complexity Low_complexity 1 31 0 4 675 22 0 0 0 chr3R 11811271 11811293 -16093760 + AT_rich Low_complexity Low_complexity 1 22 0 4 675 203 162 0 0 chr3R 11811941 11811978 -16093075 + (CATCC)n Simple_repeat Simple_repeat 3 39 0 4 675 236 111 22 0 chr3R 11813023 11813068 -16091985 + (TA)n Simple_repeat Simple_repeat 1 46 0 4 675 180 0 0 0 chr3R 11813410 11813430 -16091623 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 675 27 62 0 0 chr3R 11814648 11814696 -16090357 + AT_rich Low_complexity Low_complexity 1 48 0 4 675 23 54 0 0 chr3R 11817451 11817488 -16087565 + AT_rich Low_complexity Low_complexity 1 37 0 4 675 208 282 0 27 chr3R 11818886 11818959 -16086094 + (CAA)n Simple_repeat Simple_repeat 1 71 0 4 675 43 35 0 0 chr3R 11819403 11819460 -16085593 + AT_rich Low_complexity Low_complexity 1 57 0 4 675 241 260 0 48 chr3R 11820093 11820198 -16084855 + ROO_I LTR Pao 653 752 -7504 4 675 289 281 10 10 chr3R 11820365 11820462 -16084591 + (CAG)n Simple_repeat Simple_repeat 1 97 0 4 675 186 103 0 0 chr3R 11820487 11820516 -16084537 + (TAA)n Simple_repeat Simple_repeat 2 30 0 4 675 198 156 0 0 chr3R 11820661 11820706 -16084347 + (CAG)n Simple_repeat Simple_repeat 1 45 0 4 675 231 114 0 0 chr3R 11820761 11820796 -16084257 + (CAG)n Simple_repeat Simple_repeat 1 35 0 4 675 213 182 0 0 chr3R 11820972 11821005 -16084048 + (CGG)n Simple_repeat Simple_repeat 2 34 0 4 675 356 225 0 18 chr3R 11821156 11821269 -16083784 + ROO_I LTR Pao 631 741 -7515 4 675 216 0 0 0 chr3R 11823901 11823925 -16081128 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 675 228 35 0 0 chr3R 11823985 11824014 -16081039 + (CAG)n Simple_repeat Simple_repeat 3 31 0 4 675 200 204 41 0 chr3R 11824173 11824222 -16080831 + A-rich Low_complexity Low_complexity 4 54 0 4 675 450 125 0 0 chr3R 11825135 11825215 -16079838 + (CAG)n Simple_repeat Simple_repeat 1 80 0 4 675 207 167 0 0 chr3R 11825292 11825334 -16079719 + (CGG)n Simple_repeat Simple_repeat 1 42 0 4 675 212 178 0 22 chr3R 11826249 11826295 -16078758 + (CAAAC)n Simple_repeat Simple_repeat 2 46 0 4 675 22 35 0 0 chr3R 11826755 11826784 -16078269 + AT_rich Low_complexity Low_complexity 1 29 0 4 675 212 283 0 0 chr3R 11827036 11827089 -16077964 + (CGG)n Simple_repeat Simple_repeat 1 53 0 4 675 257 51 26 0 chr3R 11827169 11827208 -16077845 + (CAAAC)n Simple_repeat Simple_repeat 2 41 0 4 675 231 191 0 0 chr3R 11828174 11828221 -16076832 + (CAG)n Simple_repeat Simple_repeat 3 49 0 4 675 284 195 0 35 chr3R 11828497 11828582 -16076471 + (CAA)n Simple_repeat Simple_repeat 3 84 0 4 675 243 146 0 0 chr3R 11828686 11828727 -16076326 + (CGG)n Simple_repeat Simple_repeat 1 41 0 4 675 261 119 0 0 chr3R 11828987 11829029 -16076024 + (CAG)n Simple_repeat Simple_repeat 3 44 0 4 675 216 67 0 0 chr3R 11829099 11829129 -16075924 + (CAG)n Simple_repeat Simple_repeat 1 30 0 4 675 28 48 0 0 chr3R 11829669 11829711 -16075342 + AT_rich Low_complexity Low_complexity 1 42 0 4 675 635 40 182 0 chr3R 11830036 11830135 -16074918 - G5_DM LINE Jockey 0 4856 4740 4 675 216 297 0 15 chr3R 11830698 11830763 -16074290 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 4 675 203 125 0 24 chr3R 11834054 11834095 -16070958 + (CAA)n Simple_repeat Simple_repeat 1 40 0 4 675 24 0 0 0 chr3R 11838867 11838891 -16066162 + AT_rich Low_complexity Low_complexity 1 24 0 4 675 180 158 0 0 chr3R 11840179 11840217 -16064836 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 675 180 0 0 0 chr3R 11841512 11841532 -16063521 + (A)n Simple_repeat Simple_repeat 1 20 0 4 675 354 163 11 11 chr3R 11841945 11842032 -16063021 + ROO_I LTR Pao 643 729 -7527 4 675 221 163 0 23 chr3R 11842133 11842177 -16062876 + (CAG)n Simple_repeat Simple_repeat 2 44 0 4 675 261 135 0 0 chr3R 11842718 11842770 -16062283 + ROO_I LTR Pao 676 727 -7529 4 675 238 218 0 11 chr3R 11842837 11842925 -16062128 + ROO_I LTR Pao 651 737 -7519 4 675 211 114 29 0 chr3R 11845195 11845230 -16059823 + (GCATG)n Simple_repeat Simple_repeat 3 38 0 4 675 221 255 0 0 chr3R 11847898 11847945 -16057108 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 4 675 204 97 0 0 chr3R 11847964 11847995 -16057058 + (ATG)n Simple_repeat Simple_repeat 1 31 0 4 675 21 0 0 0 chr3R 11850923 11850944 -16054109 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 182 136 0 22 chr3R 11851546 11851591 -16053462 + CT-rich Low_complexity Low_complexity 1 44 0 4 675 22 70 0 0 chr3R 11852600 11852643 -16052410 + AT_rich Low_complexity Low_complexity 1 43 0 4 675 25 65 0 0 chr3R 11854091 11854137 -16050916 + AT_rich Low_complexity Low_complexity 1 46 0 4 675 25 31 0 0 chr3R 11854208 11854240 -16050813 + AT_rich Low_complexity Low_complexity 1 32 0 4 675 23 54 0 0 chr3R 11857605 11857642 -16047411 + AT_rich Low_complexity Low_complexity 1 37 0 4 675 31 44 0 0 chr3R 11859693 11859738 -16045315 + AT_rich Low_complexity Low_complexity 1 45 0 4 675 207 0 0 0 chr3R 11861606 11861629 -16043424 + (TCC)n Simple_repeat Simple_repeat 1 23 0 4 675 25 0 0 0 chr3R 11861842 11861867 -16043186 + AT_rich Low_complexity Low_complexity 1 25 0 4 675 243 61 0 0 chr3R 11862465 11862498 -16042555 + (TCTCCC)n Simple_repeat Simple_repeat 1 33 0 4 675 21 0 0 0 chr3R 11862677 11862698 -16042355 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 54 40 0 0 chr3R 11864196 11864271 -16040782 + AT_rich Low_complexity Low_complexity 1 75 0 4 675 435 83 0 0 chr3R 11865442 11865502 -16039551 + (CAG)n Simple_repeat Simple_repeat 3 62 0 4 675 633 78 39 0 chr3R 11866955 11867057 -16037996 - BS LINE Jockey -5 5121 5016 4 675 21 0 0 0 chr3R 11867883 11867904 -16037149 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 255 173 0 0 chr3R 11869499 11869551 -16035502 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 675 21 0 0 0 chr3R 11870469 11870490 -16034563 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 219 69 0 0 chr3R 11871871 11871900 -16033153 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 675 21 0 0 0 chr3R 11882989 11883010 -16022043 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 23 0 0 0 chr3R 11884666 11884689 -16020364 + AT_rich Low_complexity Low_complexity 1 23 0 4 675 184 73 0 89 chr3R 11895144 11895189 -16009864 + (CGGAG)n Simple_repeat Simple_repeat 5 45 0 4 675 225 0 0 0 chr3R 11898240 11898265 -16006788 + (T)n Simple_repeat Simple_repeat 1 25 0 4 675 27 0 0 0 chr3R 11899405 11899432 -16005621 + AT_rich Low_complexity Low_complexity 1 27 0 4 675 21 36 0 0 chr3R 11903318 11903346 -16001707 + AT_rich Low_complexity Low_complexity 1 28 0 4 675 309 151 0 0 chr3R 11907983 11908036 -15997017 + (CATA)n Simple_repeat Simple_repeat 3 55 0 4 675 205 184 0 0 chr3R 11911246 11911284 -15993769 + (CAGCT)n Simple_repeat Simple_repeat 1 38 0 4 675 21 0 0 0 chr3R 11912799 11912820 -15992233 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 21 57 0 0 chr3R 11913319 11913354 -15991699 + AT_rich Low_complexity Low_complexity 1 35 0 4 675 186 191 0 0 chr3R 11919876 11919923 -15985130 + A-rich Low_complexity Low_complexity 4 50 0 4 675 26 0 0 0 chr3R 11920235 11920261 -15984792 + AT_rich Low_complexity Low_complexity 1 26 0 4 675 200 174 0 42 chr3R 11921889 11921937 -15983116 + (CTTAT)n Simple_repeat Simple_repeat 5 50 0 4 675 21 57 0 0 chr3R 11924670 11924705 -15980348 + AT_rich Low_complexity Low_complexity 1 35 0 4 675 235 140 35 0 chr3R 11925190 11925247 -15979806 + ROO_I LTR Pao 653 711 -7545 4 675 286 288 0 0 chr3R 11925470 11925581 -15979472 + (CA)n Simple_repeat Simple_repeat 1 111 0 4 675 242 236 18 0 chr3R 11925899 11925954 -15979099 + (TATATG)n Simple_repeat Simple_repeat 1 56 0 4 675 225 177 12 60 chr3R 11926134 11926218 -15978835 + (CAATC)n Simple_repeat Simple_repeat 2 81 0 4 676 22 0 0 0 chr3R 11928942 11928964 -15976089 + AT_rich Low_complexity Low_complexity 1 22 0 4 676 309 100 0 0 chr3R 11929124 11929174 -15975879 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 676 37 52 0 0 chr3R 11929728 11929786 -15975267 + AT_rich Low_complexity Low_complexity 1 58 0 4 676 30 27 0 0 chr3R 11930157 11930194 -15974859 + AT_rich Low_complexity Low_complexity 1 37 0 4 676 29 28 0 0 chr3R 11931233 11931269 -15973784 + AT_rich Low_complexity Low_complexity 1 36 0 4 676 201 74 0 0 chr3R 11932971 11932998 -15972055 + (CAG)n Simple_repeat Simple_repeat 3 29 0 4 676 273 75 0 0 chr3R 11934876 11934916 -15970137 + (GTATG)n Simple_repeat Simple_repeat 4 43 0 4 676 23 0 0 0 chr3R 11935137 11935160 -15969893 + AT_rich Low_complexity Low_complexity 1 23 0 4 676 231 88 0 0 chr3R 11936838 11936872 -15968181 + (T)n Simple_repeat Simple_repeat 1 34 0 4 676 41 21 0 0 chr3R 11938107 11938155 -15966898 + AT_rich Low_complexity Low_complexity 1 48 0 4 676 321 93 0 0 chr3R 11938473 11938527 -15966526 + (CATCC)n Simple_repeat Simple_repeat 5 58 0 4 676 267 229 0 14 chr3R 11940062 11940133 -15964920 - ROO_I LTR Pao -7542 714 645 4 676 220 206 13 40 chr3R 11941671 11941747 -15963306 + T-rich Low_complexity Low_complexity 3 76 0 4 676 192 125 0 0 chr3R 11942718 11942750 -15962303 + (CCTAT)n Simple_repeat Simple_repeat 4 35 0 4 676 24 0 0 0 chr3R 11944154 11944178 -15960875 + AT_rich Low_complexity Low_complexity 1 24 0 4 676 202 214 0 0 chr3R 11947909 11947951 -15957102 + (CAT)n Simple_repeat Simple_repeat 1 42 0 4 676 183 277 0 0 chr3R 11951225 11951290 -15953763 + (CCCCAG)n Simple_repeat Simple_repeat 5 69 0 4 676 204 111 0 0 chr3R 11955389 11955425 -15949628 + (A)n Simple_repeat Simple_repeat 1 36 0 4 676 21 57 0 0 chr3R 11957008 11957043 -15948010 + AT_rich Low_complexity Low_complexity 1 35 0 4 676 21 36 0 0 chr3R 11958400 11958428 -15946625 + AT_rich Low_complexity Low_complexity 1 28 0 4 676 21 36 0 0 chr3R 11959934 11959962 -15945091 + AT_rich Low_complexity Low_complexity 1 28 0 4 676 195 42 0 0 chr3R 11960440 11960464 -15944589 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 4 676 255 103 0 0 chr3R 11966068 11966107 -15938946 + (CAG)n Simple_repeat Simple_repeat 3 41 0 4 676 24 32 0 0 chr3R 11967028 11967059 -15937994 + AT_rich Low_complexity Low_complexity 1 31 0 4 676 205 302 0 19 chr3R 11967241 11967295 -15937758 + (CCCCAG)n Simple_repeat Simple_repeat 2 54 0 4 676 252 77 0 0 chr3R 11967409 11967448 -15937605 + (CAG)n Simple_repeat Simple_repeat 1 39 0 4 676 252 257 10 10 chr3R 11968459 11968561 -15936492 + (CAA)n Simple_repeat Simple_repeat 1 102 0 4 676 26 30 0 0 chr3R 11976692 11976725 -15928328 + AT_rich Low_complexity Low_complexity 1 33 0 4 676 36 23 0 0 chr3R 11976843 11976886 -15928167 + AT_rich Low_complexity Low_complexity 1 43 0 4 676 182 37 0 36 chr3R 11978533 11978561 -15926492 + (CCCTAA)n Simple_repeat Simple_repeat 1 27 0 4 676 34 42 0 0 chr3R 11980327 11980375 -15924678 + AT_rich Low_complexity Low_complexity 1 48 0 4 676 180 0 0 0 chr3R 11981415 11981435 -15923618 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 676 24 32 0 0 chr3R 11982190 11982221 -15922832 + AT_rich Low_complexity Low_complexity 1 31 0 4 676 21 0 0 0 chr3R 11984113 11984134 -15920919 + AT_rich Low_complexity Low_complexity 1 21 0 4 676 192 97 0 0 chr3R 11984677 11984708 -15920345 + (A)n Simple_repeat Simple_repeat 1 31 0 4 676 224 204 0 0 chr3R 11984862 11984906 -15920147 + (CAG)n Simple_repeat Simple_repeat 3 46 0 4 676 272 181 0 27 chr3R 11985173 11985247 -15919806 + (CAA)n Simple_repeat Simple_repeat 1 72 0 4 676 25 51 0 0 chr3R 11985481 11985520 -15919533 + AT_rich Low_complexity Low_complexity 1 39 0 4 676 254 179 0 18 chr3R 11986647 11986704 -15918349 + (CCGAA)n Simple_repeat Simple_repeat 4 59 0 4 676 222 105 0 0 chr3R 11988499 11988537 -15916516 + (CATCC)n Simple_repeat Simple_repeat 4 41 0 4 676 186 150 0 0 chr3R 11990637 11990677 -15914376 + (CTG)n Simple_repeat Simple_repeat 3 42 0 4 676 191 103 26 0 chr3R 11994956 11994995 -15910058 + (TTTG)n Simple_repeat Simple_repeat 3 42 0 4 676 32 0 0 0 chr3R 11996437 11996469 -15908584 + AT_rich Low_complexity Low_complexity 1 32 0 4 676 180 0 0 0 chr3R 11996689 11996709 -15908344 + (TCG)n Simple_repeat Simple_repeat 2 21 0 4 676 209 176 38 38 chr3R 11997036 11997089 -15907964 + (TATATG)n Simple_repeat Simple_repeat 5 57 0 4 676 242 29 29 0 chr3R 11997447 11997482 -15907571 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 4 676 29 0 0 0 chr3R 12000705 12000734 -15904319 + AT_rich Low_complexity Low_complexity 1 29 0 4 676 21 36 0 0 chr3R 12001251 12001279 -15903774 + AT_rich Low_complexity Low_complexity 1 28 0 4 676 22 70 0 0 chr3R 12007717 12007760 -15897293 + AT_rich Low_complexity Low_complexity 1 43 0 4 676 259 230 13 51 chr3R 12009998 12010076 -15894977 - ROO_I LTR Pao -7525 731 657 4 676 203 88 29 0 chr3R 12010236 12010270 -15894783 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 4 676 186 43 0 0 chr3R 12013098 12013121 -15891932 + (CAG)n Simple_repeat Simple_repeat 3 25 0 4 676 3235 3 0 0 chr3R 12015186 12015532 -15889521 - Invader4_LTR LTR Gypsy 0 346 1 4 676 22 35 0 0 chr3R 12015672 12015701 -15889352 + AT_rich Low_complexity Low_complexity 1 29 0 4 676 25 31 0 0 chr3R 12017665 12017697 -15887356 + AT_rich Low_complexity Low_complexity 1 32 0 4 676 235 204 0 0 chr3R 12018856 12018900 -15886153 + (CAG)n Simple_repeat Simple_repeat 3 46 0 4 676 207 284 30 0 chr3R 12019293 12019360 -15885693 + (TGGA)n Simple_repeat Simple_repeat 4 72 0 4 676 21 71 0 0 chr3R 12029116 12029158 -15875895 + AT_rich Low_complexity Low_complexity 1 42 0 4 676 34 24 0 0 chr3R 12031098 12031139 -15873914 + AT_rich Low_complexity Low_complexity 1 41 0 4 676 302 221 0 0 chr3R 12032035 12032112 -15872941 + ROO_I LTR Pao 643 719 -7537 4 676 218 167 0 16 chr3R 12033013 12033074 -15871979 + (CGAA)n Simple_repeat Simple_repeat 3 62 0 4 676 311 191 0 0 chr3R 12033150 12033218 -15871835 - ROO_I LTR Pao -7514 742 675 4 676 271 241 0 0 chr3R 12034068 12034122 -15870931 + G-rich Low_complexity Low_complexity 6 59 0 4 676 183 191 44 0 chr3R 12034357 12034425 -15870628 + (GCTTG)n Simple_repeat Simple_repeat 3 73 0 4 676 22 0 0 0 chr3R 12034898 12034920 -15870133 + AT_rich Low_complexity Low_complexity 1 22 0 4 676 270 116 0 0 chr3R 12035315 12035358 -15869695 + (ACCG)n Simple_repeat Simple_repeat 2 44 0 4 676 23 54 0 0 chr3R 12035719 12035756 -15869297 + AT_rich Low_complexity Low_complexity 1 37 0 4 676 24 91 0 0 chr3R 12037495 12037561 -15867492 + AT_rich Low_complexity Low_complexity 1 66 0 4 676 210 118 0 0 chr3R 12038412 12038446 -15866607 + (CCA)n Simple_repeat Simple_repeat 2 35 0 4 676 206 252 19 28 chr3R 12039373 12039479 -15865574 + (CCCA)n Simple_repeat Simple_repeat 2 106 0 4 676 24 32 0 0 chr3R 12039613 12039644 -15865409 + AT_rich Low_complexity Low_complexity 1 31 0 4 676 210 179 0 0 chr3R 12040035 12040091 -15864962 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 676 279 71 0 0 chr3R 12040267 12040309 -15864744 + (CAAGG)n Simple_repeat Simple_repeat 1 42 0 4 676 203 162 0 0 chr3R 12040499 12040536 -15864517 + (CCTTG)n Simple_repeat Simple_repeat 1 37 0 4 676 216 163 0 0 chr3R 12042489 12042532 -15862521 + (CTG)n Simple_repeat Simple_repeat 3 45 0 4 676 25 0 0 0 chr3R 12043529 12043554 -15861499 + AT_rich Low_complexity Low_complexity 1 25 0 4 676 189 0 0 0 chr3R 12044278 12044299 -15860754 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 4 676 183 80 0 0 chr3R 12044302 12044327 -15860726 + (CTG)n Simple_repeat Simple_repeat 2 26 0 4 676 249 208 19 0 chr3R 12044483 12044536 -15860517 + (CTG)n Simple_repeat Simple_repeat 3 56 0 4 676 204 226 0 0 chr3R 12047155 12047217 -15857836 + (CCCA)n Simple_repeat Simple_repeat 4 65 0 4 676 213 39 0 0 chr3R 12047258 12047284 -15857769 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 676 238 214 18 0 chr3R 12047335 12047391 -15857662 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 676 198 174 0 0 chr3R 12047424 12047470 -15857583 + (TTG)n Simple_repeat Simple_repeat 1 46 0 4 676 183 80 0 0 chr3R 12047479 12047504 -15857549 + (CAA)n Simple_repeat Simple_repeat 3 27 0 4 676 212 300 0 39 chr3R 12047986 12048090 -15856963 + (TATATG)n Simple_repeat Simple_repeat 2 101 0 4 676 304 289 10 0 chr3R 12049286 12049383 -15855670 + (CTG)n Simple_repeat Simple_repeat 3 100 0 4 676 21 82 0 0 chr3R 12049572 12049621 -15855432 + AT_rich Low_complexity Low_complexity 1 49 0 4 676 228 283 0 0 chr3R 12050080 12050140 -15854913 + (CAGAGA)n Simple_repeat Simple_repeat 1 60 0 4 677 246 62 0 0 chr3R 12061103 12061135 -15843918 + (CAACT)n Simple_repeat Simple_repeat 3 34 0 4 677 200 259 17 0 chr3R 12061478 12061536 -15843517 + (CGGT)n Simple_repeat Simple_repeat 1 59 0 4 677 23 54 0 0 chr3R 12061772 12061809 -15843244 + AT_rich Low_complexity Low_complexity 1 37 0 4 677 38 22 0 0 chr3R 12061837 12061882 -15843171 + AT_rich Low_complexity Low_complexity 1 45 0 4 677 202 200 0 0 chr3R 12062118 12062158 -15842895 + (CTG)n Simple_repeat Simple_repeat 2 41 0 4 677 201 121 0 0 chr3R 12063101 12063134 -15841919 + (TTG)n Simple_repeat Simple_repeat 3 35 0 4 677 210 278 0 0 chr3R 12065386 12065440 -15839613 + (CCG)n Simple_repeat Simple_repeat 3 56 0 4 677 25 0 0 0 chr3R 12066138 12066163 -15838890 + AT_rich Low_complexity Low_complexity 1 25 0 4 677 187 114 22 22 chr3R 12066989 12067034 -15838019 + GA-rich Low_complexity Low_complexity 3 47 0 4 677 29 0 0 0 chr3R 12068739 12068768 -15836285 + AT_rich Low_complexity Low_complexity 1 29 0 4 677 26 50 0 0 chr3R 12070033 12070073 -15834980 + AT_rich Low_complexity Low_complexity 1 40 0 4 677 231 290 0 0 chr3R 12071404 12071473 -15833580 + (CGG)n Simple_repeat Simple_repeat 2 70 0 4 677 202 224 20 0 chr3R 12071636 12071685 -15833368 + (CAG)n Simple_repeat Simple_repeat 3 52 0 4 677 216 204 19 0 chr3R 12073877 12073931 -15831122 + (CCA)n Simple_repeat Simple_repeat 1 55 0 4 677 216 67 0 0 chr3R 12075663 12075693 -15829360 + (CGAA)n Simple_repeat Simple_repeat 1 30 0 4 677 201 250 0 20 chr3R 12075837 12075886 -15829167 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 677 226 172 17 0 chr3R 12079935 12079993 -15825060 - ROO_I LTR Pao -7533 723 665 4 677 213 139 0 0 chr3R 12080160 12080203 -15824850 + (CAGC)n Simple_repeat Simple_repeat 1 43 0 4 677 22 0 0 0 chr3R 12080313 12080335 -15824718 + AT_rich Low_complexity Low_complexity 1 22 0 4 677 309 266 0 0 chr3R 12083225 12083319 -15821734 + (CAG)n Simple_repeat Simple_repeat 1 94 0 4 677 317 147 0 56 chr3R 12083944 12084052 -15821001 + (CAG)n Simple_repeat Simple_repeat 3 104 0 4 677 216 266 15 15 chr3R 12084308 12084373 -15820680 + (CAG)n Simple_repeat Simple_repeat 2 66 0 4 677 228 207 35 47 chr3R 12084450 12084536 -15820517 + ROO_I LTR Pao 641 725 -7531 4 677 274 240 18 55 chr3R 12085934 12086044 -15819009 + A-rich Low_complexity Low_complexity 3 108 0 4 677 201 39 0 0 chr3R 12086456 12086482 -15818571 + (TATATG)n Simple_repeat Simple_repeat 4 29 0 4 677 24 53 0 0 chr3R 12086574 12086612 -15818441 + AT_rich Low_complexity Low_complexity 1 38 0 4 677 32 0 0 0 chr3R 12086946 12086978 -15818075 + AT_rich Low_complexity Low_complexity 1 32 0 4 677 27 0 0 0 chr3R 12089926 12089953 -15815100 + AT_rich Low_complexity Low_complexity 1 27 0 4 677 27 29 0 0 chr3R 12091665 12091699 -15813354 + AT_rich Low_complexity Low_complexity 1 34 0 4 677 22 56 0 0 chr3R 12092613 12092649 -15812404 + AT_rich Low_complexity Low_complexity 1 36 0 4 677 21 0 0 0 chr3R 12098054 12098075 -15806978 + AT_rich Low_complexity Low_complexity 1 21 0 4 677 28 48 0 0 chr3R 12098377 12098419 -15806634 + AT_rich Low_complexity Low_complexity 1 42 0 4 677 220 250 0 0 chr3R 12098957 12099009 -15806044 + (CGTG)n Simple_repeat Simple_repeat 1 52 0 4 677 267 93 0 0 chr3R 12103480 12103523 -15801530 + (TC)n Simple_repeat Simple_repeat 2 44 0 4 677 22 0 0 0 chr3R 12104257 12104279 -15800774 + AT_rich Low_complexity Low_complexity 1 22 0 4 677 22 0 0 0 chr3R 12104770 12104792 -15800261 + AT_rich Low_complexity Low_complexity 1 22 0 4 677 192 125 0 0 chr3R 12107341 12107373 -15797680 + (TC)n Simple_repeat Simple_repeat 1 32 0 4 677 23 0 0 0 chr3R 12108140 12108163 -15796890 + AT_rich Low_complexity Low_complexity 1 23 0 4 677 204 111 0 0 chr3R 12108961 12108997 -15796056 + (A)n Simple_repeat Simple_repeat 1 36 0 4 677 21 36 0 0 chr3R 12109396 12109424 -15795629 + AT_rich Low_complexity Low_complexity 1 28 0 4 677 29 47 0 0 chr3R 12111981 12112024 -15793029 + AT_rich Low_complexity Low_complexity 1 43 0 4 677 23 0 0 0 chr3R 12118996 12119019 -15786034 + AT_rich Low_complexity Low_complexity 1 23 0 4 677 237 33 0 0 chr3R 12119166 12119196 -15785857 + (TA)n Simple_repeat Simple_repeat 1 30 0 4 677 24 0 0 0 chr3R 12120080 12120104 -15784949 + AT_rich Low_complexity Low_complexity 1 24 0 4 677 21 0 0 0 chr3R 12120414 12120435 -15784618 + AT_rich Low_complexity Low_complexity 1 21 0 4 677 225 154 0 0 chr3R 12121349 12121388 -15783665 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 4 677 36 0 0 0 chr3R 12122000 12122036 -15783017 + AT_rich Low_complexity Low_complexity 1 36 0 4 677 28 48 0 0 chr3R 12122309 12122351 -15782702 + AT_rich Low_complexity Low_complexity 1 42 0 4 677 21 0 0 0 chr3R 12124915 12124936 -15780117 + AT_rich Low_complexity Low_complexity 1 21 0 4 677 230 231 19 28 chr3R 12127842 12127949 -15777104 + A-rich Low_complexity Low_complexity 4 109 0 4 677 278 240 0 28 chr3R 12127958 12128065 -15776988 + (TTA)n Simple_repeat Simple_repeat 3 106 0 4 677 21 36 0 0 chr3R 12128286 12128314 -15776739 + AT_rich Low_complexity Low_complexity 1 28 0 4 677 23 68 0 0 chr3R 12129646 12129690 -15775363 + AT_rich Low_complexity Low_complexity 1 44 0 4 677 22 35 0 0 chr3R 12129982 12130011 -15775042 + AT_rich Low_complexity Low_complexity 1 29 0 4 677 235 274 0 0 chr3R 12130487 12130571 -15774482 + A-rich Low_complexity Low_complexity 1 84 0 4 677 235 191 0 31 chr3R 12131837 12131902 -15773151 + A-rich Low_complexity Low_complexity 2 64 0 4 677 186 43 0 0 chr3R 12132015 12132038 -15773015 + (CGA)n Simple_repeat Simple_repeat 2 24 0 4 677 25 0 0 0 chr3R 12136300 12136325 -15768728 + AT_rich Low_complexity Low_complexity 1 25 0 4 677 205 176 0 0 chr3R 12144585 12144619 -15760434 + (CATATA)n Simple_repeat Simple_repeat 4 37 0 4 677 21 0 0 0 chr3R 12145957 12145978 -15759075 + AT_rich Low_complexity Low_complexity 1 21 0 4 677 22 0 0 0 chr3R 12147231 12147253 -15757800 + AT_rich Low_complexity Low_complexity 1 22 0 4 677 340 87 0 0 chr3R 12155409 12155455 -15749598 - DNAREP1_DM LINE Penelope -548 46 1 4 677 21 0 0 0 chr3R 12162167 12162188 -15742865 + AT_rich Low_complexity Low_complexity 1 21 0 4 677 222 191 0 0 chr3R 12166570 12166617 -15738436 + (CCG)n Simple_repeat Simple_repeat 2 48 0 4 677 180 0 0 0 chr3R 12168648 12168668 -15736385 + (CAG)n Simple_repeat Simple_repeat 1 20 0 4 677 24 91 0 0 chr3R 12180079 12180145 -15724908 + AT_rich Low_complexity Low_complexity 1 66 0 4 677 29 0 0 0 chr3R 12185272 12185301 -15719752 + AT_rich Low_complexity Low_complexity 1 29 0 4 677 260 256 11 11 chr3R 12187382 12187473 -15717580 + (TGG)n Simple_repeat Simple_repeat 3 93 0 4 677 33 56 0 0 chr3R 12188175 12188229 -15716824 + AT_rich Low_complexity Low_complexity 1 54 0 4 678 28 0 0 0 chr3R 12197061 12197089 -15707964 + AT_rich Low_complexity Low_complexity 1 28 0 4 678 246 81 0 0 chr3R 12197654 12197691 -15707362 + (TC)n Simple_repeat Simple_repeat 2 38 0 4 678 23 54 0 0 chr3R 12200228 12200265 -15704788 + AT_rich Low_complexity Low_complexity 1 37 0 4 678 301 270 0 26 chr3R 12201382 12201496 -15703557 + (CTG)n Simple_repeat Simple_repeat 2 112 0 4 678 207 100 0 0 chr3R 12202115 12202145 -15702908 + (ATGGTG)n Simple_repeat Simple_repeat 1 30 0 4 678 211 184 0 0 chr3R 12202167 12202205 -15702848 + (CTG)n Simple_repeat Simple_repeat 1 38 0 4 678 216 0 0 0 chr3R 12207683 12207707 -15697346 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 678 207 0 0 0 chr3R 12208057 12208080 -15696973 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 678 22 35 0 0 chr3R 12209244 12209273 -15695780 + AT_rich Low_complexity Low_complexity 1 29 0 4 678 183 80 0 0 chr3R 12212925 12212950 -15692103 + (CACCAT)n Simple_repeat Simple_repeat 4 28 0 4 678 23 0 0 0 chr3R 12213583 12213606 -15691447 + AT_rich Low_complexity Low_complexity 1 23 0 4 678 21 36 0 0 chr3R 12213682 12213710 -15691343 + AT_rich Low_complexity Low_complexity 1 28 0 4 678 189 175 0 0 chr3R 12214669 12214709 -15690344 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 4 678 240 154 0 0 chr3R 12217152 12217204 -15687849 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 678 221 254 0 0 chr3R 12222081 12222136 -15682917 + (CAA)n Simple_repeat Simple_repeat 2 56 0 4 678 220 262 0 15 chr3R 12222284 12222350 -15682703 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 678 235 241 0 0 chr3R 12222477 12222531 -15682522 + GA-rich Low_complexity Low_complexity 2 55 0 4 678 21 0 0 0 chr3R 12222682 12222703 -15682350 + AT_rich Low_complexity Low_complexity 1 21 0 4 678 27 49 0 0 chr3R 12222828 12222869 -15682184 + AT_rich Low_complexity Low_complexity 1 41 0 4 678 22 56 0 0 chr3R 12225604 12225640 -15679413 + AT_rich Low_complexity Low_complexity 1 36 0 4 678 182 156 0 22 chr3R 12227070 12227116 -15677937 + (CAT)n Simple_repeat Simple_repeat 3 47 0 4 678 28 86 0 0 chr3R 12228348 12228418 -15676635 + AT_rich Low_complexity Low_complexity 1 70 0 4 678 183 162 0 0 chr3R 12230849 12230886 -15674167 + (GAGTG)n Simple_repeat Simple_repeat 4 40 0 4 678 314 102 0 33 chr3R 12232512 12232573 -15672480 + (CCA)n Simple_repeat Simple_repeat 2 60 0 4 678 221 224 0 0 chr3R 12235445 12235494 -15669559 + (CATCC)n Simple_repeat Simple_repeat 1 49 0 4 678 201 39 0 0 chr3R 12236372 12236398 -15668655 + (TATCG)n Simple_repeat Simple_repeat 3 28 0 4 678 189 211 0 0 chr3R 12236404 12236456 -15668597 + (GTTTG)n Simple_repeat Simple_repeat 5 56 0 4 678 22 0 0 0 chr3R 12236990 12237012 -15668041 + AT_rich Low_complexity Low_complexity 1 22 0 4 678 203 250 0 0 chr3R 12238300 12238344 -15666709 + CT-rich Low_complexity Low_complexity 2 45 0 4 678 21 36 0 0 chr3R 12238785 12238813 -15666240 + AT_rich Low_complexity Low_complexity 1 28 0 4 678 189 107 0 0 chr3R 12239696 12239724 -15665329 + (CTCA)n Simple_repeat Simple_repeat 4 31 0 4 678 180 176 0 0 chr3R 12241478 12241512 -15663541 + (TTTCG)n Simple_repeat Simple_repeat 2 35 0 4 678 23 33 0 0 chr3R 12241587 12241617 -15663436 + AT_rich Low_complexity Low_complexity 1 30 0 4 678 23 0 0 0 chr3R 12245956 12245979 -15659074 + AT_rich Low_complexity Low_complexity 1 23 0 4 678 24 32 0 0 chr3R 12246677 12246708 -15658345 + AT_rich Low_complexity Low_complexity 1 31 0 4 678 25 0 0 0 chr3R 12248876 12248901 -15656152 + AT_rich Low_complexity Low_complexity 1 25 0 4 678 210 71 0 0 chr3R 12250068 12250096 -15654957 + (CACTC)n Simple_repeat Simple_repeat 5 32 0 4 678 192 97 0 0 chr3R 12250131 12250162 -15654891 + (CGAT)n Simple_repeat Simple_repeat 3 33 0 4 678 22 0 0 0 chr3R 12250643 12250665 -15654388 + AT_rich Low_complexity Low_complexity 1 22 0 4 678 21 0 0 0 chr3R 12253228 12253249 -15651804 + AT_rich Low_complexity Low_complexity 1 21 0 4 678 37 93 0 0 chr3R 12254939 12255046 -15650007 + AT_rich Low_complexity Low_complexity 1 107 0 4 678 23 54 0 0 chr3R 12258597 12258634 -15646419 + AT_rich Low_complexity Low_complexity 1 37 0 4 678 22 0 0 0 chr3R 12262049 12262071 -15642982 + AT_rich Low_complexity Low_complexity 1 22 0 4 678 24 0 0 0 chr3R 12273855 12273879 -15631174 + AT_rich Low_complexity Low_complexity 1 24 0 4 678 21 0 0 0 chr3R 12274039 12274060 -15630993 + AT_rich Low_complexity Low_complexity 1 21 0 4 678 41 21 0 0 chr3R 12279665 12279713 -15625340 + AT_rich Low_complexity Low_complexity 1 48 0 4 678 27 0 0 0 chr3R 12284067 12284094 -15620959 + AT_rich Low_complexity Low_complexity 1 27 0 4 678 51 79 0 0 chr3R 12295666 12295780 -15609273 + AT_rich Low_complexity Low_complexity 1 114 0 4 678 22 94 0 0 chr3R 12298828 12298892 -15606161 + AT_rich Low_complexity Low_complexity 1 64 0 4 678 23 33 0 0 chr3R 12298934 12298964 -15606089 + AT_rich Low_complexity Low_complexity 1 30 0 4 678 30 83 0 0 chr3R 12301654 12301726 -15603327 + AT_rich Low_complexity Low_complexity 1 72 0 4 678 209 222 16 16 chr3R 12311357 12311421 -15593632 + (CTG)n Simple_repeat Simple_repeat 2 65 0 4 678 300 178 0 0 chr3R 12312084 12312157 -15592896 + ROO_I LTR Pao 663 735 -7521 4 678 22 56 0 0 chr3R 12318338 12318374 -15586679 + AT_rich Low_complexity Low_complexity 1 36 0 4 679 186 128 0 0 chr3R 12321578 12321617 -15583436 + (ATGGTG)n Simple_repeat Simple_repeat 6 44 0 4 679 31 0 0 0 chr3R 12323330 12323361 -15581692 + AT_rich Low_complexity Low_complexity 1 31 0 4 679 21 0 0 0 chr3R 12325852 12325873 -15579180 + AT_rich Low_complexity Low_complexity 1 21 0 4 679 228 246 0 40 chr3R 12330423 12330499 -15574554 + (TGAA)n Simple_repeat Simple_repeat 3 75 0 4 679 183 167 0 0 chr3R 12336215 12336257 -15568796 + (ATGGTG)n Simple_repeat Simple_repeat 6 47 0 4 679 251 220 0 17 chr3R 12336547 12336607 -15568446 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 679 201 197 0 0 chr3R 12337241 12337302 -15567751 + (CAT)n Simple_repeat Simple_repeat 3 63 0 4 679 201 263 0 0 chr3R 12338984 12339041 -15566012 + A-rich Low_complexity Low_complexity 1 57 0 4 679 289 107 0 0 chr3R 12339402 12339458 -15565595 + ROO_I LTR Pao 675 730 -7526 4 679 219 152 0 0 chr3R 12340664 12340710 -15564343 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 679 23 0 0 0 chr3R 12342132 12342155 -15562898 + AT_rich Low_complexity Low_complexity 1 23 0 4 679 189 107 0 0 chr3R 12342525 12342553 -15562500 + (TTCGG)n Simple_repeat Simple_repeat 5 32 0 4 679 237 65 0 0 chr3R 12344377 12344408 -15560645 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 679 197 119 0 23 chr3R 12346252 12346295 -15558758 + (TCC)n Simple_repeat Simple_repeat 3 44 0 4 679 183 80 0 0 chr3R 12348158 12348183 -15556870 + (T)n Simple_repeat Simple_repeat 1 25 0 4 679 192 77 0 0 chr3R 12349014 12349040 -15556013 + (TA)n Simple_repeat Simple_repeat 1 26 0 4 679 21 0 0 0 chr3R 12349972 12349993 -15555060 + AT_rich Low_complexity Low_complexity 1 21 0 4 679 26 0 0 0 chr3R 12353664 12353690 -15551363 + AT_rich Low_complexity Low_complexity 1 26 0 4 679 260 259 22 11 chr3R 12355844 12355934 -15549119 + (TTG)n Simple_repeat Simple_repeat 3 93 0 4 679 203 268 14 14 chr3R 12356287 12356359 -15548694 + (CA)n Simple_repeat Simple_repeat 1 72 0 4 679 23 33 0 0 chr3R 12359370 12359400 -15545653 + AT_rich Low_complexity Low_complexity 1 30 0 4 679 321 176 0 0 chr3R 12359631 12359705 -15545348 + (TCCA)n Simple_repeat Simple_repeat 3 76 0 4 679 43 20 0 0 chr3R 12360202 12360252 -15544801 + AT_rich Low_complexity Low_complexity 1 50 0 4 679 21 82 0 0 chr3R 12360316 12360365 -15544688 + AT_rich Low_complexity Low_complexity 1 49 0 4 679 506 162 19 19 chr3R 12361042 12361149 -15543904 - Transib-N1_DM DNA Transib -407 107 1 4 679 189 74 0 0 chr3R 12361173 12361200 -15543853 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 679 28 0 0 0 chr3R 12362893 12362921 -15542132 + AT_rich Low_complexity Low_complexity 1 28 0 4 679 243 0 0 0 chr3R 12365029 12365056 -15539997 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 679 203 152 0 0 chr3R 12365386 12365419 -15539634 + (CTG)n Simple_repeat Simple_repeat 2 34 0 4 679 201 167 0 0 chr3R 12367330 12367366 -15537687 + (CATAC)n Simple_repeat Simple_repeat 1 36 0 4 679 21 36 0 0 chr3R 12368184 12368212 -15536841 + AT_rich Low_complexity Low_complexity 1 28 0 4 679 195 42 0 0 chr3R 12368530 12368554 -15536499 + (TTA)n Simple_repeat Simple_repeat 3 26 0 4 679 27 29 0 0 chr3R 12374668 12374702 -15530351 + AT_rich Low_complexity Low_complexity 1 34 0 4 679 25 31 0 0 chr3R 12377268 12377300 -15527753 + AT_rich Low_complexity Low_complexity 1 32 0 4 679 27 29 0 0 chr3R 12379419 12379453 -15525600 + AT_rich Low_complexity Low_complexity 1 34 0 4 679 24 0 0 0 chr3R 12379545 12379569 -15525484 + AT_rich Low_complexity Low_complexity 1 24 0 4 679 279 200 0 51 chr3R 12381784 12381863 -15523190 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 4 679 230 196 22 0 chr3R 12382960 12383006 -15522047 + (TTCTG)n Simple_repeat Simple_repeat 5 51 0 4 679 26 0 0 0 chr3R 12384829 12384855 -15520198 + AT_rich Low_complexity Low_complexity 1 26 0 4 679 241 231 0 0 chr3R 12392516 12392581 -15512472 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 679 200 278 0 0 chr3R 12394317 12394371 -15510682 + (CATATA)n Simple_repeat Simple_repeat 2 55 0 4 679 208 279 0 0 chr3R 12395871 12395950 -15509103 + (CA)n Simple_repeat Simple_repeat 1 79 0 4 679 203 158 0 0 chr3R 12396043 12396081 -15508972 + GA-rich Low_complexity Low_complexity 2 39 0 4 679 29 0 0 0 chr3R 12400705 12400734 -15504319 + AT_rich Low_complexity Low_complexity 1 29 0 4 679 324 70 0 0 chr3R 12402429 12402472 -15502581 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 679 21 0 0 0 chr3R 12406211 12406232 -15498821 + AT_rich Low_complexity Low_complexity 1 21 0 4 679 204 40 0 0 chr3R 12408806 12408831 -15496222 + (ACTG)n Simple_repeat Simple_repeat 3 27 0 4 679 183 42 0 0 chr3R 12409241 12409265 -15495788 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 679 285 29 0 0 chr3R 12409584 12409618 -15495435 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 679 22 56 0 0 chr3R 12416314 12416350 -15488703 + AT_rich Low_complexity Low_complexity 1 36 0 4 679 262 219 0 0 chr3R 12417208 12417272 -15487781 + ROO_I LTR Pao 668 731 -7525 4 679 180 0 0 0 chr3R 12417378 12417398 -15487655 + (CTG)n Simple_repeat Simple_repeat 1 20 0 4 679 222 271 0 17 chr3R 12418157 12418217 -15486836 + (CTG)n Simple_repeat Simple_repeat 3 61 0 4 679 405 163 0 32 chr3R 12418336 12418431 -15486622 - ROO_I LTR Pao -7522 734 643 4 679 213 94 0 0 chr3R 12419992 12420024 -15485029 + (TTG)n Simple_repeat Simple_repeat 1 32 0 4 679 27 0 0 0 chr3R 12420379 12420406 -15484647 + AT_rich Low_complexity Low_complexity 1 27 0 4 679 28 0 0 0 chr3R 12421145 12421173 -15483880 + AT_rich Low_complexity Low_complexity 1 28 0 4 679 243 61 0 0 chr3R 12426669 12426702 -15478351 + (TAGA)n Simple_repeat Simple_repeat 3 35 0 4 679 21 36 0 0 chr3R 12426994 12427022 -15478031 + AT_rich Low_complexity Low_complexity 1 28 0 4 679 297 109 0 0 chr3R 12427530 12427576 -15477477 + (GCTG)n Simple_repeat Simple_repeat 3 48 0 4 679 240 163 0 0 chr3R 12428020 12428063 -15476990 + (CATA)n Simple_repeat Simple_repeat 2 44 0 4 679 200 77 115 0 chr3R 12430680 12430732 -15474321 + (CTAG)n Simple_repeat Simple_repeat 4 61 0 4 679 32 26 0 0 chr3R 12434008 12434047 -15471006 + AT_rich Low_complexity Low_complexity 1 39 0 4 679 32 26 0 0 chr3R 12440217 12440256 -15464797 + AT_rich Low_complexity Low_complexity 1 39 0 4 679 23 78 0 0 chr3R 12440478 12440529 -15464524 + AT_rich Low_complexity Low_complexity 1 51 0 4 679 25 31 0 0 chr3R 12445480 12445512 -15459541 + AT_rich Low_complexity Low_complexity 1 32 0 4 679 23 0 0 0 chr3R 12446038 12446061 -15458992 + AT_rich Low_complexity Low_complexity 1 23 0 4 680 210 326 0 10 chr3R 12451946 12452042 -15453011 + GA-rich Low_complexity Low_complexity 2 96 0 4 680 25 0 0 0 chr3R 12453267 12453292 -15451761 + AT_rich Low_complexity Low_complexity 1 25 0 4 680 22 0 0 0 chr3R 12454381 12454403 -15450650 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 258 136 0 0 chr3R 12455235 12455279 -15449774 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 680 55 0 0 0 chr3R 12459101 12459156 -15445897 + AT_rich Low_complexity Low_complexity 1 55 0 4 680 26 30 0 0 chr3R 12461445 12461478 -15443575 + AT_rich Low_complexity Low_complexity 1 33 0 4 680 231 146 0 0 chr3R 12466237 12466278 -15438775 + (TGG)n Simple_repeat Simple_repeat 1 41 0 4 680 24 32 0 0 chr3R 12468082 12468113 -15436940 + AT_rich Low_complexity Low_complexity 1 31 0 4 680 21 57 0 0 chr3R 12469154 12469189 -15435864 + AT_rich Low_complexity Low_complexity 1 35 0 4 680 25 31 0 0 chr3R 12480786 12480818 -15424235 + AT_rich Low_complexity Low_complexity 1 32 0 4 680 842 111 0 31 chr3R 12481511 12481641 -15423412 - DNAREP1_DM LINE Penelope -466 128 3 4 680 21 57 0 0 chr3R 12483048 12483083 -15421970 + AT_rich Low_complexity Low_complexity 1 35 0 4 680 234 62 0 0 chr3R 12484519 12484551 -15420502 + (CCG)n Simple_repeat Simple_repeat 2 33 0 4 680 200 220 17 0 chr3R 12490333 12490392 -15414661 + (CAGAGA)n Simple_repeat Simple_repeat 4 63 0 4 680 225 119 0 0 chr3R 12492081 12492123 -15412930 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 680 180 77 0 0 chr3R 12493564 12493590 -15411463 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 680 189 0 0 0 chr3R 12495190 12495211 -15409842 + (CAGAC)n Simple_repeat Simple_repeat 3 23 0 4 680 226 203 0 63 chr3R 12495396 12495459 -15409594 + (CCCCAG)n Simple_repeat Simple_repeat 1 59 0 4 680 180 0 0 0 chr3R 12496489 12496509 -15408544 + (A)n Simple_repeat Simple_repeat 1 20 0 4 680 230 81 0 26 chr3R 12497005 12497043 -15408010 + (TTCGGG)n Simple_repeat Simple_repeat 3 39 0 4 680 192 216 0 0 chr3R 12499470 12499521 -15405532 + G-rich Low_complexity Low_complexity 5 55 0 4 680 33 0 0 0 chr3R 12499863 12499896 -15405157 + AT_rich Low_complexity Low_complexity 1 33 0 4 680 22 0 0 0 chr3R 12503194 12503216 -15401837 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 22 0 0 0 chr3R 12503440 12503462 -15401591 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 27 0 0 0 chr3R 12506518 12506545 -15398508 + AT_rich Low_complexity Low_complexity 1 27 0 4 680 207 0 0 0 chr3R 12506907 12506930 -15398123 + (CA)n Simple_repeat Simple_repeat 1 23 0 4 680 22 0 0 0 chr3R 12508224 12508246 -15396807 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 216 0 0 0 chr3R 12509829 12509853 -15395200 + (A)n Simple_repeat Simple_repeat 1 24 0 4 680 201 162 0 26 chr3R 12511635 12511673 -15393380 + (CAG)n Simple_repeat Simple_repeat 2 38 0 4 680 227 133 0 22 chr3R 12511935 12511981 -15393072 + (CAG)n Simple_repeat Simple_repeat 3 47 0 4 680 200 204 18 36 chr3R 12512346 12512402 -15392651 + A-rich Low_complexity Low_complexity 2 56 0 4 680 22 35 0 0 chr3R 12512554 12512583 -15392470 + AT_rich Low_complexity Low_complexity 1 29 0 4 680 210 167 0 0 chr3R 12513546 12513582 -15391471 + T-rich Low_complexity Low_complexity 1 36 0 4 680 24 0 0 0 chr3R 12514596 12514620 -15390433 + AT_rich Low_complexity Low_complexity 1 24 0 4 680 216 158 0 0 chr3R 12521312 12521350 -15383703 + (CCA)n Simple_repeat Simple_repeat 1 38 0 4 680 182 91 30 0 chr3R 12522120 12522153 -15382900 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 680 26 50 0 0 chr3R 12523124 12523164 -15381889 + AT_rich Low_complexity Low_complexity 1 40 0 4 680 25 0 0 0 chr3R 12524850 12524875 -15380178 + AT_rich Low_complexity Low_complexity 1 25 0 4 680 29 0 0 0 chr3R 12529250 12529279 -15375774 + AT_rich Low_complexity Low_complexity 1 29 0 4 680 42 20 0 0 chr3R 12530618 12530667 -15374386 + AT_rich Low_complexity Low_complexity 1 49 0 4 680 21 36 0 0 chr3R 12531765 12531793 -15373260 + AT_rich Low_complexity Low_complexity 1 28 0 4 680 24 0 0 0 chr3R 12534324 12534348 -15370705 + AT_rich Low_complexity Low_complexity 1 24 0 4 680 204 156 0 22 chr3R 12536423 12536469 -15368584 + (TAA)n Simple_repeat Simple_repeat 1 45 0 4 680 25 51 0 0 chr3R 12536478 12536517 -15368536 + AT_rich Low_complexity Low_complexity 1 39 0 4 680 180 0 0 0 chr3R 12536522 12536542 -15368511 + (TTAAA)n Simple_repeat Simple_repeat 2 21 0 4 680 23 33 0 0 chr3R 12537397 12537427 -15367626 + AT_rich Low_complexity Low_complexity 1 30 0 4 680 21 36 0 0 chr3R 12538772 12538800 -15366253 + AT_rich Low_complexity Low_complexity 1 28 0 4 680 209 149 43 0 chr3R 12539458 12539505 -15365548 + (TATG)n Simple_repeat Simple_repeat 2 50 0 4 680 234 0 0 0 chr3R 12539968 12539994 -15365059 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 680 22 0 0 0 chr3R 12540421 12540443 -15364610 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 243 61 0 0 chr3R 12541631 12541664 -15363389 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 680 21 36 0 0 chr3R 12542824 12542852 -15362201 + AT_rich Low_complexity Low_complexity 1 28 0 4 680 227 196 0 0 chr3R 12544411 12544457 -15360596 + CT-rich Low_complexity Low_complexity 1 46 0 4 680 189 182 0 0 chr3R 12544813 12544868 -15360185 + (CAATC)n Simple_repeat Simple_repeat 2 56 0 4 680 24 0 0 0 chr3R 12545332 12545356 -15359697 + AT_rich Low_complexity Low_complexity 1 24 0 4 680 21 57 0 0 chr3R 12547138 12547173 -15357880 + AT_rich Low_complexity Low_complexity 1 35 0 4 680 215 140 51 34 chr3R 12548684 12548743 -15356310 + A-rich Low_complexity Low_complexity 2 61 0 4 680 33 25 0 0 chr3R 12550316 12550356 -15354697 + AT_rich Low_complexity Low_complexity 1 40 0 4 680 25 65 0 0 chr3R 12551392 12551438 -15353615 + AT_rich Low_complexity Low_complexity 1 46 0 4 680 22 0 0 0 chr3R 12551976 12551998 -15353055 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 225 0 0 0 chr3R 12552396 12552421 -15352632 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 680 29 47 0 0 chr3R 12553659 12553702 -15351351 + AT_rich Low_complexity Low_complexity 1 43 0 4 680 38 51 0 0 chr3R 12554525 12554584 -15350469 + AT_rich Low_complexity Low_complexity 1 59 0 4 680 222 118 0 0 chr3R 12554771 12554805 -15350248 + (TTG)n Simple_repeat Simple_repeat 1 34 0 4 680 24 0 0 0 chr3R 12555801 12555825 -15349228 + AT_rich Low_complexity Low_complexity 1 24 0 4 680 23 86 0 0 chr3R 12557012 12557070 -15347983 + AT_rich Low_complexity Low_complexity 1 58 0 4 680 22 0 0 0 chr3R 12557650 12557672 -15347381 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 36 23 0 0 chr3R 12557906 12557949 -15347104 + AT_rich Low_complexity Low_complexity 1 43 0 4 680 208 317 0 0 chr3R 12558590 12558650 -15346403 + (CCG)n Simple_repeat Simple_repeat 3 62 0 4 680 213 132 0 0 chr3R 12558817 12558855 -15346198 + (CCG)n Simple_repeat Simple_repeat 2 39 0 4 680 24 0 0 0 chr3R 12559376 12559400 -15345653 + AT_rich Low_complexity Low_complexity 1 24 0 4 680 27 0 0 0 chr3R 12559544 12559571 -15345482 + AT_rich Low_complexity Low_complexity 1 27 0 4 680 207 170 0 0 chr3R 12559851 12559898 -15345155 + (TTA)n Simple_repeat Simple_repeat 3 49 0 4 680 21 0 0 0 chr3R 12560660 12560681 -15344372 + AT_rich Low_complexity Low_complexity 1 21 0 4 680 23 68 0 0 chr3R 12560875 12560919 -15344134 + AT_rich Low_complexity Low_complexity 1 44 0 4 680 204 40 0 0 chr3R 12561458 12561483 -15343570 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 680 243 88 0 0 chr3R 12564496 12564530 -15340523 + (TCCA)n Simple_repeat Simple_repeat 3 36 0 4 680 237 239 14 14 chr3R 12564717 12564789 -15340264 + ROO_I LTR Pao 664 735 -7521 4 680 30 45 0 0 chr3R 12565335 12565379 -15339674 + AT_rich Low_complexity Low_complexity 1 44 0 4 680 49 0 0 0 chr3R 12567807 12567856 -15337197 + AT_rich Low_complexity Low_complexity 1 49 0 4 680 21 0 0 0 chr3R 12568590 12568611 -15336442 + AT_rich Low_complexity Low_complexity 1 21 0 4 680 38 0 0 0 chr3R 12572460 12572498 -15332555 + AT_rich Low_complexity Low_complexity 1 38 0 4 680 200 276 0 0 chr3R 12572789 12572847 -15332206 + (CAGAGA)n Simple_repeat Simple_repeat 6 63 0 4 680 39 0 0 0 chr3R 12573912 12573951 -15331102 + AT_rich Low_complexity Low_complexity 1 39 0 4 680 29 70 0 0 chr3R 12574208 12574265 -15330788 + AT_rich Low_complexity Low_complexity 1 57 0 4 680 23 33 0 0 chr3R 12576429 12576459 -15328594 + AT_rich Low_complexity Low_complexity 1 30 0 4 680 22 35 0 0 chr3R 12579698 12579727 -15325326 + AT_rich Low_complexity Low_complexity 1 29 0 4 680 23 33 0 0 chr3R 12580261 12580291 -15324762 + AT_rich Low_complexity Low_complexity 1 30 0 4 680 22 0 0 0 chr3R 12580726 12580748 -15324305 + AT_rich Low_complexity Low_complexity 1 22 0 4 680 22 35 0 0 chr3R 12581573 12581602 -15323451 + AT_rich Low_complexity Low_complexity 1 29 0 4 680 2053 5 0 0 chr3R 12582117 12582341 -15322712 - DIVER_LTR LTR Pao 0 224 1 4 10 52742 2 0 0 chr3R 12582341 12587984 -15317069 - DIVER_I LTR Pao 0 5643 1 4 681 2053 5 0 0 chr3R 12588005 12588229 -15316824 - DIVER_LTR LTR Pao 0 224 1 4 681 22 56 0 0 chr3R 12588492 12588528 -15316525 + AT_rich Low_complexity Low_complexity 1 36 0 4 681 45 75 0 0 chr3R 12588720 12588814 -15316239 + AT_rich Low_complexity Low_complexity 1 94 0 4 681 44 35 0 0 chr3R 12590521 12590579 -15314474 + AT_rich Low_complexity Low_complexity 1 58 0 4 681 26 0 0 0 chr3R 12590623 12590649 -15314404 + AT_rich Low_complexity Low_complexity 1 26 0 4 681 30 0 0 0 chr3R 12590664 12590694 -15314359 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 21 36 0 0 chr3R 12592435 12592463 -15312590 + AT_rich Low_complexity Low_complexity 1 28 0 4 681 32 0 0 0 chr3R 12597445 12597477 -15307576 + AT_rich Low_complexity Low_complexity 1 32 0 4 681 30 0 0 0 chr3R 12597532 12597562 -15307491 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 23 0 0 0 chr3R 12601563 12601586 -15303467 + AT_rich Low_complexity Low_complexity 1 23 0 4 681 30 45 0 0 chr3R 12602706 12602750 -15302303 + AT_rich Low_complexity Low_complexity 1 44 0 4 681 201 39 0 0 chr3R 12605631 12605657 -15299396 + (TTATA)n Simple_repeat Simple_repeat 2 27 0 4 681 196 91 0 43 chr3R 12609870 12609916 -15295137 + (CCCA)n Simple_repeat Simple_repeat 1 44 0 4 681 28 61 0 0 chr3R 12610405 12610454 -15294599 + AT_rich Low_complexity Low_complexity 1 49 0 4 681 22 0 0 0 chr3R 12614049 12614071 -15290982 + AT_rich Low_complexity Low_complexity 1 22 0 4 681 29 70 0 0 chr3R 12619142 12619199 -15285854 + AT_rich Low_complexity Low_complexity 1 57 0 4 681 22 56 0 0 chr3R 12622045 12622081 -15282972 + AT_rich Low_complexity Low_complexity 1 36 0 4 681 246 62 0 0 chr3R 12626535 12626567 -15278486 + (TA)n Simple_repeat Simple_repeat 1 32 0 4 681 23 33 0 0 chr3R 12629697 12629727 -15275326 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 25 0 0 0 chr3R 12631711 12631736 -15273317 + AT_rich Low_complexity Low_complexity 1 25 0 4 681 218 290 19 9 chr3R 12633797 12633905 -15271148 + (TA)n Simple_repeat Simple_repeat 2 110 0 4 681 477 127 0 0 chr3R 12635627 12635706 -15269347 + (CTG)n Simple_repeat Simple_repeat 3 81 0 4 681 21 57 0 0 chr3R 12637267 12637302 -15267751 + AT_rich Low_complexity Low_complexity 1 35 0 4 681 30 27 0 0 chr3R 12640654 12640691 -15264362 + AT_rich Low_complexity Low_complexity 1 37 0 4 681 208 286 0 0 chr3R 12641529 12641592 -15263461 + GA-rich Low_complexity Low_complexity 2 64 0 4 681 26 30 0 0 chr3R 12645131 12645164 -15259889 + AT_rich Low_complexity Low_complexity 1 33 0 4 681 32 0 0 0 chr3R 12645745 12645777 -15259276 + AT_rich Low_complexity Low_complexity 1 32 0 4 681 21 36 0 0 chr3R 12646942 12646970 -15258083 + AT_rich Low_complexity Low_complexity 1 28 0 4 681 259 260 0 0 chr3R 12652976 12653049 -15252004 + (CGG)n Simple_repeat Simple_repeat 3 75 0 4 681 180 200 0 0 chr3R 12653282 12653342 -15251711 + (CTG)n Simple_repeat Simple_repeat 3 62 0 4 681 276 135 29 86 chr3R 12653460 12653565 -15251488 - ROO_I LTR Pao -7518 738 640 4 681 205 240 0 0 chr3R 12653575 12653625 -15251428 + (CGG)n Simple_repeat Simple_repeat 2 51 0 4 681 21 0 0 0 chr3R 12655457 12655478 -15249575 + AT_rich Low_complexity Low_complexity 1 21 0 4 681 203 179 0 0 chr3R 12655631 12655670 -15249383 + T-rich Low_complexity Low_complexity 1 39 0 4 681 23 33 0 0 chr3R 12656845 12656875 -15248178 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 23 33 0 0 chr3R 12659513 12659543 -15245510 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 21 36 0 0 chr3R 12659705 12659733 -15245320 + AT_rich Low_complexity Low_complexity 1 28 0 4 681 21 0 0 0 chr3R 12659757 12659778 -15245275 + AT_rich Low_complexity Low_complexity 1 21 0 4 681 30 27 0 0 chr3R 12660827 12660864 -15244189 + AT_rich Low_complexity Low_complexity 1 37 0 4 681 27 29 0 0 chr3R 12661236 12661270 -15243783 + AT_rich Low_complexity Low_complexity 1 34 0 4 681 27 73 0 0 chr3R 12663701 12663756 -15241297 + AT_rich Low_complexity Low_complexity 1 55 0 4 681 23 68 0 0 chr3R 12664367 12664411 -15240642 + AT_rich Low_complexity Low_complexity 1 44 0 4 681 25 65 0 0 chr3R 12664433 12664479 -15240574 + AT_rich Low_complexity Low_complexity 1 46 0 4 681 27 0 0 0 chr3R 12670791 12670818 -15234235 + AT_rich Low_complexity Low_complexity 1 27 0 4 681 24 67 0 0 chr3R 12672363 12672408 -15232645 + AT_rich Low_complexity Low_complexity 1 45 0 4 681 260 231 20 90 chr3R 12673337 12673437 -15231616 - ROO_I LTR Pao -7512 744 652 4 681 32 26 0 0 chr3R 12682162 12682201 -15222852 + AT_rich Low_complexity Low_complexity 1 39 0 4 681 34 42 0 0 chr3R 12682650 12682698 -15222355 + AT_rich Low_complexity Low_complexity 1 48 0 4 681 23 33 0 0 chr3R 12682814 12682844 -15222209 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 207 267 17 0 chr3R 12683489 12683549 -15221504 + CT-rich Low_complexity Low_complexity 1 61 0 4 681 180 0 0 0 chr3R 12685402 12685422 -15219631 + (CATTC)n Simple_repeat Simple_repeat 2 21 0 4 681 21 0 0 0 chr3R 12688453 12688474 -15216579 + AT_rich Low_complexity Low_complexity 1 21 0 4 681 24 32 0 0 chr3R 12688824 12688855 -15216198 + AT_rich Low_complexity Low_complexity 1 31 0 4 681 26 30 0 0 chr3R 12689018 12689051 -15216002 + AT_rich Low_complexity Low_complexity 1 33 0 4 681 26 30 0 0 chr3R 12694928 12694961 -15210092 + AT_rich Low_complexity Low_complexity 1 33 0 4 681 25 0 0 0 chr3R 12695004 12695029 -15210024 + AT_rich Low_complexity Low_complexity 1 25 0 4 681 24 0 0 0 chr3R 12696217 12696241 -15208812 + AT_rich Low_complexity Low_complexity 1 24 0 4 681 23 33 0 0 chr3R 12696299 12696329 -15208724 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 29 47 0 0 chr3R 12701803 12701846 -15203207 + AT_rich Low_complexity Low_complexity 1 43 0 4 681 23 0 0 0 chr3R 12702814 12702837 -15202216 + AT_rich Low_complexity Low_complexity 1 23 0 4 681 21 0 0 0 chr3R 12703944 12703965 -15201088 + AT_rich Low_complexity Low_complexity 1 21 0 4 681 37 0 0 0 chr3R 12705996 12706033 -15199020 + AT_rich Low_complexity Low_complexity 1 37 0 4 681 37 39 0 0 chr3R 12707927 12707978 -15197075 + AT_rich Low_complexity Low_complexity 1 51 0 4 681 22 0 0 0 chr3R 12710266 12710288 -15194765 + AT_rich Low_complexity Low_complexity 1 22 0 4 681 22 35 0 0 chr3R 12711789 12711818 -15193235 + AT_rich Low_complexity Low_complexity 1 29 0 4 681 33 43 0 0 chr3R 12712594 12712641 -15192412 + AT_rich Low_complexity Low_complexity 1 47 0 4 681 26 0 0 0 chr3R 12713910 12713936 -15191117 + AT_rich Low_complexity Low_complexity 1 26 0 4 682 28 0 0 0 chr3R 12717541 12717569 -15187484 + AT_rich Low_complexity Low_complexity 1 28 0 4 682 189 0 0 0 chr3R 12718029 12718050 -15187003 + (TATG)n Simple_repeat Simple_repeat 4 24 0 4 682 24 111 0 0 chr3R 12718882 12718990 -15186063 + AT_rich Low_complexity Low_complexity 1 108 0 4 682 28 29 0 0 chr3R 12722317 12722352 -15182701 + AT_rich Low_complexity Low_complexity 1 35 0 4 682 22 0 0 0 chr3R 12723631 12723653 -15181400 + AT_rich Low_complexity Low_complexity 1 22 0 4 682 201 171 0 0 chr3R 12724509 12724544 -15180509 + A-rich Low_complexity Low_complexity 1 35 0 4 682 25 31 0 0 chr3R 12725061 12725093 -15179960 + AT_rich Low_complexity Low_complexity 1 32 0 4 682 28 61 0 0 chr3R 12725143 12725192 -15179861 + AT_rich Low_complexity Low_complexity 1 49 0 4 682 23 0 0 0 chr3R 12730355 12730378 -15174675 + AT_rich Low_complexity Low_complexity 1 23 0 4 682 192 111 0 0 chr3R 12731788 12731824 -15173229 + (CAG)n Simple_repeat Simple_repeat 3 38 0 4 682 246 62 0 0 chr3R 12732301 12732333 -15172720 + (CATA)n Simple_repeat Simple_repeat 4 35 0 4 682 192 97 0 0 chr3R 12734085 12734116 -15170937 + (T)n Simple_repeat Simple_repeat 1 31 0 4 682 180 179 0 0 chr3R 12735411 12735450 -15169603 + (TCCG)n Simple_repeat Simple_repeat 1 39 0 4 682 23 0 0 0 chr3R 12737852 12737875 -15167178 + AT_rich Low_complexity Low_complexity 1 23 0 4 682 28 71 0 0 chr3R 12739127 12739183 -15165870 + AT_rich Low_complexity Low_complexity 1 56 0 4 682 218 180 0 39 chr3R 12741574 12741626 -15163427 + T-rich Low_complexity Low_complexity 5 54 0 4 682 23 33 0 0 chr3R 12743269 12743299 -15161754 + AT_rich Low_complexity Low_complexity 1 30 0 4 682 343 233 163 0 chr3R 12750401 12750487 -15154566 - DNAREP1_DM LINE Penelope -64 530 431 4 682 27 49 0 0 chr3R 12751089 12751130 -15153923 + AT_rich Low_complexity Low_complexity 1 41 0 4 682 35 54 0 0 chr3R 12751205 12751261 -15153792 + AT_rich Low_complexity Low_complexity 1 56 0 4 682 33 43 0 0 chr3R 12752502 12752549 -15152504 + AT_rich Low_complexity Low_complexity 1 47 0 4 682 31 76 0 0 chr3R 12756673 12756739 -15148314 + AT_rich Low_complexity Low_complexity 1 66 0 4 682 24 0 0 0 chr3R 12757690 12757714 -15147339 + AT_rich Low_complexity Low_complexity 1 24 0 4 682 279 140 0 0 chr3R 12758356 12758406 -15146647 + (CTG)n Simple_repeat Simple_repeat 3 52 0 4 682 201 74 0 0 chr3R 12758559 12758586 -15146467 + (CTG)n Simple_repeat Simple_repeat 3 29 0 4 682 465 115 0 0 chr3R 12758664 12758751 -15146302 + (CTG)n Simple_repeat Simple_repeat 3 89 0 4 682 24 0 0 0 chr3R 12759110 12759134 -15145919 + AT_rich Low_complexity Low_complexity 1 24 0 4 682 351 0 0 0 chr3R 12760096 12760135 -15144918 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 682 186 43 0 0 chr3R 12763553 12763576 -15141477 + (CAGC)n Simple_repeat Simple_repeat 2 24 0 4 682 180 0 0 0 chr3R 12765064 12765084 -15139969 + (T)n Simple_repeat Simple_repeat 1 20 0 4 682 206 238 16 16 chr3R 12767426 12767490 -15137563 + (TCCG)n Simple_repeat Simple_repeat 2 65 0 4 682 27 0 0 0 chr3R 12769430 12769457 -15135596 + AT_rich Low_complexity Low_complexity 1 27 0 4 682 21 0 0 0 chr3R 12770834 12770855 -15134198 + AT_rich Low_complexity Low_complexity 1 21 0 4 682 24 0 0 0 chr3R 12773248 12773272 -15131781 + AT_rich Low_complexity Low_complexity 1 24 0 4 682 243 103 0 0 chr3R 12775755 12775794 -15129259 + (CAA)n Simple_repeat Simple_repeat 3 41 0 4 682 26 50 0 0 chr3R 12776075 12776115 -15128938 + AT_rich Low_complexity Low_complexity 1 40 0 4 682 21 0 0 0 chr3R 12777870 12777891 -15127162 + AT_rich Low_complexity Low_complexity 1 21 0 4 682 22 0 0 0 chr3R 12779617 12779639 -15125414 + AT_rich Low_complexity Low_complexity 1 22 0 4 682 23 0 0 0 chr3R 12779818 12779841 -15125212 + AT_rich Low_complexity Low_complexity 1 23 0 4 682 27 0 0 0 chr3R 12779873 12779900 -15125153 + AT_rich Low_complexity Low_complexity 1 27 0 4 682 180 97 0 0 chr3R 12780119 12780150 -15124903 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 4 682 26 30 0 0 chr3R 12783846 12783879 -15121174 + AT_rich Low_complexity Low_complexity 1 33 0 4 682 33 0 0 0 chr3R 12784087 12784120 -15120933 + AT_rich Low_complexity Low_complexity 1 33 0 5 682 25 0 0 0 chr3R 12786811 12786836 -15118217 + AT_rich Low_complexity Low_complexity 1 25 0 5 682 22 0 0 0 chr3R 12790108 12790130 -15114923 + AT_rich Low_complexity Low_complexity 1 22 0 5 682 209 89 0 62 chr3R 12793161 12793209 -15111844 + (GATTG)n Simple_repeat Simple_repeat 1 45 0 5 682 227 178 0 0 chr3R 12793360 12793405 -15111648 + (TTTCG)n Simple_repeat Simple_repeat 1 45 0 5 682 244 118 0 0 chr3R 12794401 12794435 -15110618 + Gypsy4_I LTR Gypsy 3569 3602 -2686 5 682 29 0 0 0 chr3R 12794751 12794780 -15110273 + AT_rich Low_complexity Low_complexity 1 29 0 5 682 22 0 0 0 chr3R 12796461 12796483 -15108570 + AT_rich Low_complexity Low_complexity 1 22 0 5 682 26 30 0 0 chr3R 12796560 12796593 -15108460 + AT_rich Low_complexity Low_complexity 1 33 0 5 682 30 45 0 0 chr3R 12796962 12797006 -15108047 + AT_rich Low_complexity Low_complexity 1 44 0 5 682 22 70 0 0 chr3R 12797324 12797367 -15107686 + AT_rich Low_complexity Low_complexity 1 43 0 5 682 25 0 0 0 chr3R 12799737 12799762 -15105291 + AT_rich Low_complexity Low_complexity 1 25 0 5 682 24 77 0 0 chr3R 12803669 12803721 -15101332 + AT_rich Low_complexity Low_complexity 1 52 0 5 682 40 21 0 0 chr3R 12803929 12803976 -15101077 + AT_rich Low_complexity Low_complexity 1 47 0 5 682 25 51 0 0 chr3R 12803990 12804029 -15101024 + AT_rich Low_complexity Low_complexity 1 39 0 5 682 25 65 0 0 chr3R 12806091 12806137 -15098916 + AT_rich Low_complexity Low_complexity 1 46 0 5 682 198 0 0 0 chr3R 12807333 12807355 -15097698 + (TATG)n Simple_repeat Simple_repeat 3 24 0 5 682 34 0 0 0 chr3R 12810014 12810048 -15095005 + AT_rich Low_complexity Low_complexity 1 34 0 5 682 21 0 0 0 chr3R 12811104 12811125 -15093928 + AT_rich Low_complexity Low_complexity 1 21 0 5 682 228 67 0 0 chr3R 12812599 12812629 -15092424 + (TATG)n Simple_repeat Simple_repeat 1 30 0 5 682 198 143 0 0 chr3R 12813350 12813385 -15091668 + (ATTCG)n Simple_repeat Simple_repeat 4 38 0 5 682 239 235 99 0 chr3R 12817667 12817748 -15087305 - DNAREP1_DM LINE Penelope -10 584 496 5 682 867 263 29 25 chr3R 12817757 12818038 -15087015 - DMCR1A LINE CR1 -996 3474 3193 5 682 56 0 0 0 chr3R 12832230 12832286 -15072767 + AT_rich Low_complexity Low_complexity 1 56 0 5 682 25 65 0 0 chr3R 12837567 12837613 -15067440 + AT_rich Low_complexity Low_complexity 1 46 0 5 683 23 0 0 0 chr3R 12852673 12852696 -15052357 + AT_rich Low_complexity Low_complexity 1 23 0 5 683 24 0 0 0 chr3R 12853315 12853339 -15051714 + AT_rich Low_complexity Low_complexity 1 24 0 5 683 180 125 0 0 chr3R 12854654 12854686 -15050367 + (CCG)n Simple_repeat Simple_repeat 2 33 0 5 683 323 160 0 13 chr3R 12854927 12855003 -15050050 + (CCA)n Simple_repeat Simple_repeat 3 77 0 5 683 285 89 0 0 chr3R 12855309 12855354 -15049699 + (CCA)n Simple_repeat Simple_repeat 1 45 0 5 683 22 35 0 0 chr3R 12856501 12856530 -15048523 + AT_rich Low_complexity Low_complexity 1 29 0 5 683 26 0 0 0 chr3R 12859643 12859669 -15045384 + AT_rich Low_complexity Low_complexity 1 26 0 5 683 21 0 0 0 chr3R 12860458 12860479 -15044574 + AT_rich Low_complexity Low_complexity 1 21 0 5 683 30 0 0 0 chr3R 12864920 12864950 -15040103 + AT_rich Low_complexity Low_complexity 1 30 0 5 683 41 21 0 0 chr3R 12865976 12866024 -15039029 + AT_rich Low_complexity Low_complexity 1 48 0 5 683 34 24 0 0 chr3R 12866161 12866202 -15038851 + AT_rich Low_complexity Low_complexity 1 41 0 5 683 31 68 0 0 chr3R 12867578 12867637 -15037416 + AT_rich Low_complexity Low_complexity 1 59 0 5 683 23 0 0 0 chr3R 12869153 12869176 -15035877 + AT_rich Low_complexity Low_complexity 1 23 0 5 683 256 194 45 0 chr3R 12870314 12870381 -15034672 + ROO_I LTR Pao 664 733 -7523 5 683 27 29 0 0 chr3R 12874780 12874814 -15030239 + AT_rich Low_complexity Low_complexity 1 34 0 5 683 28 0 0 0 chr3R 12874873 12874901 -15030152 + AT_rich Low_complexity Low_complexity 1 28 0 5 683 23 0 0 0 chr3R 12881054 12881077 -15023976 + AT_rich Low_complexity Low_complexity 1 23 0 5 683 26 50 0 0 chr3R 12886015 12886055 -15018998 + AT_rich Low_complexity Low_complexity 1 40 0 5 683 26 0 0 0 chr3R 12893374 12893400 -15011653 + AT_rich Low_complexity Low_complexity 1 26 0 5 683 278 50 0 24 chr3R 12895234 12895275 -15009778 + (GA)n Simple_repeat Simple_repeat 2 41 0 5 683 191 80 77 39 chr3R 12902673 12902751 -15002302 + (TTAA)n Simple_repeat Simple_repeat 2 82 0 5 683 25 31 0 0 chr3R 12904608 12904640 -15000413 + AT_rich Low_complexity Low_complexity 1 32 0 5 683 24 0 0 0 chr3R 12905831 12905855 -14999198 + AT_rich Low_complexity Low_complexity 1 24 0 5 683 45 19 0 0 chr3R 12911140 12911192 -14993861 + AT_rich Low_complexity Low_complexity 1 52 0 5 683 183 139 0 0 chr3R 12912732 12912768 -14992285 + (CAA)n Simple_repeat Simple_repeat 3 38 0 5 683 202 192 19 19 chr3R 12913807 12913860 -14991193 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 5 683 49 0 0 0 chr3R 12920512 12920561 -14984492 + AT_rich Low_complexity Low_complexity 1 49 0 5 683 200 158 52 17 chr3R 12923034 12923092 -14981961 + (TTATA)n Simple_repeat Simple_repeat 3 62 0 5 683 195 139 0 0 chr3R 12925821 12925857 -14979196 + (CCTAG)n Simple_repeat Simple_repeat 5 40 0 5 683 25 0 0 0 chr3R 12926651 12926676 -14978377 + AT_rich Low_complexity Low_complexity 1 25 0 5 683 22 0 0 0 chr3R 12935466 12935488 -14969565 + AT_rich Low_complexity Low_complexity 1 22 0 5 683 231 280 0 0 chr3R 12940503 12940578 -14964475 + T-rich Low_complexity Low_complexity 1 75 0 5 683 189 0 0 0 chr3R 12944437 12944458 -14960595 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 683 241 250 0 0 chr3R 12944619 12944675 -14960378 + (TTG)n Simple_repeat Simple_repeat 1 56 0 5 683 210 219 30 30 chr3R 12945194 12945260 -14959793 + T-rich Low_complexity Low_complexity 3 68 0 5 683 268 118 137 0 chr3R 12946635 12946686 -14958367 + DNAREP1_DM LINE Penelope 1 58 -536 5 683 313 272 11 0 chr3R 12946681 12946773 -14958280 + DNAREP1_DM LINE Penelope 292 384 -210 5 683 206 105 0 26 chr3R 12946774 12946813 -14958240 + (TAA)n Simple_repeat Simple_repeat 1 38 0 5 683 384 207 0 0 chr3R 12946862 12946949 -14958104 + DNAREP1_DM LINE Penelope 508 594 0 5 683 23 33 0 0 chr3R 12947022 12947052 -14958001 + AT_rich Low_complexity Low_complexity 1 30 0 5 683 23 0 0 0 chr3R 12951771 12951794 -14953259 + AT_rich Low_complexity Low_complexity 1 23 0 5 683 21 36 0 0 chr3R 12966919 12966947 -14938106 + AT_rich Low_complexity Low_complexity 1 28 0 5 683 244 261 11 11 chr3R 12967778 12967867 -14937186 + (CTG)n Simple_repeat Simple_repeat 1 89 0 5 683 22 0 0 0 chr3R 12968442 12968464 -14936589 + AT_rich Low_complexity Low_complexity 1 22 0 5 683 23 0 0 0 chr3R 12969921 12969944 -14935109 + AT_rich Low_complexity Low_complexity 1 23 0 5 683 22 35 0 0 chr3R 12971036 12971065 -14933988 + AT_rich Low_complexity Low_complexity 1 29 0 5 683 243 0 0 0 chr3R 12973717 12973744 -14931309 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 684 186 43 0 0 chr3R 12986340 12986363 -14918690 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 684 195 167 0 0 chr3R 12987505 12987547 -14917506 + (TA)n Simple_repeat Simple_repeat 1 42 0 5 684 22 35 0 0 chr3R 12989200 12989229 -14915824 + AT_rich Low_complexity Low_complexity 1 29 0 5 684 234 0 0 0 chr3R 12991956 12991982 -14913071 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 684 21 36 0 0 chr3R 12993172 12993200 -14911853 + AT_rich Low_complexity Low_complexity 1 28 0 5 684 23 54 0 0 chr3R 12994657 12994694 -14910359 + AT_rich Low_complexity Low_complexity 1 37 0 5 684 206 245 0 20 chr3R 12994836 12994886 -14910167 + (TATG)n Simple_repeat Simple_repeat 4 52 0 5 684 24 0 0 0 chr3R 12998785 12998809 -14906244 + AT_rich Low_complexity Low_complexity 1 24 0 5 684 32 57 0 0 chr3R 13002033 13002086 -14902967 + AT_rich Low_complexity Low_complexity 1 53 0 5 684 24 0 0 0 chr3R 13004921 13004945 -14900108 + AT_rich Low_complexity Low_complexity 1 24 0 5 684 26 82 0 0 chr3R 13010376 13010437 -14894616 + AT_rich Low_complexity Low_complexity 1 61 0 5 684 22 0 0 0 chr3R 13011955 13011977 -14893076 + AT_rich Low_complexity Low_complexity 1 22 0 5 684 23 0 0 0 chr3R 13012971 13012994 -14892059 + AT_rich Low_complexity Low_complexity 1 23 0 5 684 22 35 0 0 chr3R 13018596 13018625 -14886428 + AT_rich Low_complexity Low_complexity 1 29 0 5 684 180 97 0 0 chr3R 13019978 13020009 -14885044 + (TTCGG)n Simple_repeat Simple_repeat 4 34 0 5 684 227 179 15 0 chr3R 13024926 13024993 -14880060 + (TTTG)n Simple_repeat Simple_repeat 1 68 0 5 684 28 29 0 0 chr3R 13027460 13027495 -14877558 + AT_rich Low_complexity Low_complexity 1 35 0 5 684 25 51 0 0 chr3R 13028288 13028327 -14876726 + AT_rich Low_complexity Low_complexity 1 39 0 5 684 22 35 0 0 chr3R 13030375 13030404 -14874649 + AT_rich Low_complexity Low_complexity 1 29 0 5 684 23 0 0 0 chr3R 13032669 13032692 -14872361 + AT_rich Low_complexity Low_complexity 1 23 0 5 684 23 0 0 0 chr3R 13034446 13034469 -14870584 + AT_rich Low_complexity Low_complexity 1 23 0 5 684 28 29 0 0 chr3R 13034558 13034593 -14870460 + AT_rich Low_complexity Low_complexity 1 35 0 5 684 21 0 0 0 chr3R 13035338 13035359 -14869694 + AT_rich Low_complexity Low_complexity 1 21 0 5 684 24 0 0 0 chr3R 13036595 13036619 -14868434 + AT_rich Low_complexity Low_complexity 1 24 0 5 684 27 62 0 0 chr3R 13036711 13036759 -14868294 + AT_rich Low_complexity Low_complexity 1 48 0 5 684 28 0 0 0 chr3R 13037369 13037397 -14867656 + AT_rich Low_complexity Low_complexity 1 28 0 5 684 22 0 0 0 chr3R 13038681 13038703 -14866350 + AT_rich Low_complexity Low_complexity 1 22 0 5 684 198 156 0 0 chr3R 13039612 13039657 -14865396 + A-rich Low_complexity Low_complexity 4 48 0 5 684 23 0 0 0 chr3R 13040300 13040323 -14864730 + AT_rich Low_complexity Low_complexity 1 23 0 5 684 207 164 0 68 chr3R 13041705 13041764 -14863289 + T-rich Low_complexity Low_complexity 4 58 0 5 684 24 32 0 0 chr3R 13045185 13045216 -14859837 + AT_rich Low_complexity Low_complexity 1 31 0 5 684 23 54 0 0 chr3R 13045572 13045609 -14859444 + AT_rich Low_complexity Low_complexity 1 37 0 5 684 207 186 13 67 chr3R 13047738 13047813 -14857240 + A-rich Low_complexity Low_complexity 2 72 0 5 684 246 62 0 0 chr3R 13053044 13053076 -14851977 + (CTG)n Simple_repeat Simple_repeat 1 32 0 5 684 23 0 0 0 chr3R 13053265 13053288 -14851765 + AT_rich Low_complexity Low_complexity 1 23 0 5 684 208 232 11 58 chr3R 13057927 13058014 -14847039 + T-rich Low_complexity Low_complexity 5 87 0 5 684 26 0 0 0 chr3R 13058690 13058716 -14846337 + AT_rich Low_complexity Low_complexity 1 26 0 5 684 28 29 0 0 chr3R 13061458 13061493 -14843560 + AT_rich Low_complexity Low_complexity 1 35 0 5 684 216 196 0 0 chr3R 13064779 13064825 -14840228 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 5 684 216 111 0 0 chr3R 13069091 13069127 -14835926 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 684 21 36 0 0 chr3R 13069713 13069741 -14835312 + AT_rich Low_complexity Low_complexity 1 28 0 5 684 35 0 0 0 chr3R 13071502 13071537 -14833516 + AT_rich Low_complexity Low_complexity 1 35 0 5 684 192 135 0 0 chr3R 13073185 13073222 -14831831 + (CTG)n Simple_repeat Simple_repeat 2 38 0 5 684 227 271 0 28 chr3R 13073609 13073681 -14831372 + (CTG)n Simple_repeat Simple_repeat 2 71 0 5 684 23 0 0 0 chr3R 13075825 13075848 -14829205 + AT_rich Low_complexity Low_complexity 1 23 0 5 684 24 32 0 0 chr3R 13078167 13078198 -14826855 + AT_rich Low_complexity Low_complexity 1 31 0 5 684 21 0 0 0 chr3R 13079297 13079318 -14825735 + AT_rich Low_complexity Low_complexity 1 21 0 5 684 243 103 0 0 chr3R 13082988 13083027 -14822026 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 684 210 91 0 0 chr3R 13085179 13085212 -14819841 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 684 26 74 0 0 chr3R 13087844 13087898 -14817155 + AT_rich Low_complexity Low_complexity 1 54 0 5 684 180 0 0 0 chr3R 13090330 13090350 -14814703 + (T)n Simple_repeat Simple_repeat 1 20 0 5 684 189 0 0 0 chr3R 13090882 13090903 -14814150 + (GA)n Simple_repeat Simple_repeat 2 22 0 5 684 28 48 0 0 chr3R 13093580 13093622 -14811431 + AT_rich Low_complexity Low_complexity 1 42 0 5 684 234 172 0 45 chr3R 13095057 13095124 -14809929 + T-rich Low_complexity Low_complexity 5 68 0 5 684 36 0 0 0 chr3R 13097498 13097534 -14807519 + AT_rich Low_complexity Low_complexity 1 36 0 5 684 31 0 0 0 chr3R 13102751 13102782 -14802271 + AT_rich Low_complexity Low_complexity 1 31 0 5 685 198 143 0 0 chr3R 13107660 13107695 -14797358 + (A)n Simple_repeat Simple_repeat 1 35 0 5 685 213 253 42 0 chr3R 13108091 13108186 -14796867 + (CA)n Simple_repeat Simple_repeat 2 100 0 5 685 186 43 0 0 chr3R 13109402 13109425 -14795628 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 685 22 0 0 0 chr3R 13111374 13111396 -14793657 + AT_rich Low_complexity Low_complexity 1 22 0 5 685 180 77 0 0 chr3R 13111739 13111765 -14793288 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 685 25 0 0 0 chr3R 13112020 13112045 -14793008 + AT_rich Low_complexity Low_complexity 1 25 0 5 685 22 0 0 0 chr3R 13116141 13116163 -14788890 + AT_rich Low_complexity Low_complexity 1 22 0 5 685 27 62 0 0 chr3R 13119092 13119140 -14785913 + AT_rich Low_complexity Low_complexity 1 48 0 5 685 26 50 0 0 chr3R 13119593 13119633 -14785420 + AT_rich Low_complexity Low_complexity 1 40 0 5 685 249 163 0 0 chr3R 13119643 13119692 -14785361 + (ATG)n Simple_repeat Simple_repeat 1 49 0 5 685 3246 11 0 0 chr3R 13120448 13120806 -14784247 + BS LINE Jockey 4769 5126 0 5 685 206 75 50 0 chr3R 13122046 13122086 -14782967 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 5 685 342 129 0 0 chr3R 13122486 13122548 -14782505 + (CTG)n Simple_repeat Simple_repeat 1 62 0 5 685 24 32 0 0 chr3R 13122868 13122899 -14782154 + AT_rich Low_complexity Low_complexity 1 31 0 5 685 35 24 0 0 chr3R 13125091 13125133 -14779920 + AT_rich Low_complexity Low_complexity 1 42 0 5 685 180 77 0 0 chr3R 13126707 13126733 -14778320 + (CAG)n Simple_repeat Simple_repeat 1 26 0 5 685 282 252 142 32 chr3R 13127695 13127948 -14777105 + PENELOPE LINE Penelope 3893 4008 -153 5 685 25 31 0 0 chr3R 13131903 13131935 -14773118 + AT_rich Low_complexity Low_complexity 1 32 0 5 685 22 0 0 0 chr3R 13138836 13138858 -14766195 + AT_rich Low_complexity Low_complexity 1 22 0 5 685 25 75 0 0 chr3R 13145787 13145840 -14759213 + AT_rich Low_complexity Low_complexity 1 53 0 5 685 21 36 0 0 chr3R 13149828 13149856 -14755197 + AT_rich Low_complexity Low_complexity 1 28 0 5 685 23 54 0 0 chr3R 13152344 13152381 -14752672 + AT_rich Low_complexity Low_complexity 1 37 0 5 685 24 32 0 0 chr3R 13155969 13156000 -14749053 + AT_rich Low_complexity Low_complexity 1 31 0 5 685 22 35 0 0 chr3R 13158523 13158552 -14746501 + AT_rich Low_complexity Low_complexity 1 29 0 5 685 189 74 0 0 chr3R 13160436 13160463 -14744590 + (CAG)n Simple_repeat Simple_repeat 2 28 0 5 685 41 21 0 0 chr3R 13163332 13163380 -14741673 + AT_rich Low_complexity Low_complexity 1 48 0 5 685 189 196 0 0 chr3R 13163828 13163874 -14741179 + (ATG)n Simple_repeat Simple_repeat 1 46 0 5 685 212 175 0 0 chr3R 13167289 13167329 -14737724 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 685 216 135 0 0 chr3R 13169849 13169886 -14735167 + (ATTCG)n Simple_repeat Simple_repeat 2 38 0 5 685 26 64 0 0 chr3R 13172269 13172316 -14732737 + AT_rich Low_complexity Low_complexity 1 47 0 5 685 11530 0 53 0 chr3R 13172465 13173957 -14731096 - FW_DM LINE Jockey -2 4690 3120 5 685 26 50 0 0 chr3R 13176094 13176134 -14728919 + AT_rich Low_complexity Low_complexity 1 40 0 5 685 39 0 0 0 chr3R 13179368 13179407 -14725646 + AT_rich Low_complexity Low_complexity 1 39 0 5 685 234 0 0 0 chr3R 13179810 13179836 -14725217 + (ATG)n Simple_repeat Simple_repeat 3 28 0 5 685 212 266 16 0 chr3R 13181802 13181866 -14723187 + A-rich Low_complexity Low_complexity 2 66 0 5 685 25 0 0 0 chr3R 13182840 13182865 -14722188 + AT_rich Low_complexity Low_complexity 1 25 0 5 685 327 49 0 0 chr3R 13185257 13185298 -14719755 + (TCCA)n Simple_repeat Simple_repeat 3 43 0 5 685 203 274 16 0 chr3R 13188438 13188500 -14716553 + (CAA)n Simple_repeat Simple_repeat 1 63 0 5 685 237 197 0 0 chr3R 13188604 13188670 -14716383 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 685 225 222 0 36 chr3R 13190168 13190224 -14714829 + (CCCGAA)n Simple_repeat Simple_repeat 3 56 0 5 685 201 178 0 0 chr3R 13191206 13191251 -14713802 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 685 201 152 43 21 chr3R 13191686 13191733 -14713320 + T-rich Low_complexity Low_complexity 3 50 0 5 685 192 135 0 0 chr3R 13193403 13193440 -14711613 + (ACTG)n Simple_repeat Simple_repeat 4 40 0 5 685 226 220 0 0 chr3R 13194845 13194895 -14710158 + GA-rich Low_complexity Low_complexity 2 51 0 5 685 219 250 0 16 chr3R 13197430 13197491 -14707562 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 685 38 0 0 0 chr3R 13200547 13200585 -14704468 + AT_rich Low_complexity Low_complexity 1 38 0 5 685 195 100 0 0 chr3R 13200957 13200987 -14704066 + (AACTG)n Simple_repeat Simple_repeat 1 30 0 5 685 25 65 0 0 chr3R 13205016 13205062 -14699991 + AT_rich Low_complexity Low_complexity 1 46 0 5 685 21 36 0 0 chr3R 13205198 13205226 -14699827 + AT_rich Low_complexity Low_complexity 1 28 0 5 685 24 32 0 0 chr3R 13205774 13205805 -14699248 + AT_rich Low_complexity Low_complexity 1 31 0 5 685 22 0 0 0 chr3R 13211688 13211710 -14693343 + AT_rich Low_complexity Low_complexity 1 22 0 5 685 183 80 0 0 chr3R 13212676 13212701 -14692352 + (CAG)n Simple_repeat Simple_repeat 1 25 0 5 685 261 0 0 0 chr3R 13214880 13214909 -14690144 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 685 206 208 0 40 chr3R 13214946 13214996 -14690057 + (CATATA)n Simple_repeat Simple_repeat 3 50 0 5 685 21 36 0 0 chr3R 13216114 13216142 -14688911 + AT_rich Low_complexity Low_complexity 1 28 0 5 685 40 49 0 0 chr3R 13217416 13217477 -14687576 + AT_rich Low_complexity Low_complexity 1 61 0 5 685 22 0 0 0 chr3R 13222744 13222766 -14682287 + AT_rich Low_complexity Low_complexity 1 22 0 5 685 186 167 0 0 chr3R 13225086 13225122 -14679931 + (CCG)n Simple_repeat Simple_repeat 2 37 0 5 685 206 116 23 0 chr3R 13228477 13228520 -14676533 + (TTAAA)n Simple_repeat Simple_repeat 3 46 0 5 685 24 32 0 0 chr3R 13229613 13229644 -14675409 + AT_rich Low_complexity Low_complexity 1 31 0 5 685 23 0 0 0 chr3R 13230089 13230112 -14674941 + AT_rich Low_complexity Low_complexity 1 23 0 5 685 29 60 0 0 chr3R 13233228 13233278 -14671775 + AT_rich Low_complexity Low_complexity 1 50 0 5 686 26 50 0 0 chr3R 13238451 13238491 -14666562 + AT_rich Low_complexity Low_complexity 1 40 0 5 686 25 0 0 0 chr3R 13240353 13240378 -14664675 + AT_rich Low_complexity Low_complexity 1 25 0 5 686 31 26 0 0 chr3R 13240518 13240556 -14664497 + AT_rich Low_complexity Low_complexity 1 38 0 5 686 225 146 36 0 chr3R 13242214 13242269 -14662784 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 686 230 186 0 0 chr3R 13242608 13242651 -14662402 + DNAREP1_DM LINE Penelope 12 54 -540 5 686 33 43 0 0 chr3R 13242928 13242975 -14662078 + AT_rich Low_complexity Low_complexity 1 47 0 5 686 24 32 0 0 chr3R 13243726 13243757 -14661296 + AT_rich Low_complexity Low_complexity 1 31 0 5 686 21 36 0 0 chr3R 13244366 13244394 -14660659 + AT_rich Low_complexity Low_complexity 1 28 0 5 686 21 36 0 0 chr3R 13245146 13245174 -14659879 + AT_rich Low_complexity Low_complexity 1 28 0 5 686 23 54 0 0 chr3R 13245853 13245890 -14659163 + AT_rich Low_complexity Low_complexity 1 37 0 5 686 40 0 0 0 chr3R 13246733 13246773 -14658280 + AT_rich Low_complexity Low_complexity 1 40 0 5 686 30 0 0 0 chr3R 13246939 13246969 -14658084 + AT_rich Low_complexity Low_complexity 1 30 0 5 686 21 57 0 0 chr3R 13252825 13252860 -14652193 + AT_rich Low_complexity Low_complexity 1 35 0 5 686 28 48 0 0 chr3R 13252982 13253024 -14652029 + AT_rich Low_complexity Low_complexity 1 42 0 5 686 31 0 0 0 chr3R 13255384 13255415 -14649638 + AT_rich Low_complexity Low_complexity 1 31 0 5 686 22 0 0 0 chr3R 13259869 13259891 -14645162 + AT_rich Low_complexity Low_complexity 1 22 0 5 686 21 0 0 0 chr3R 13261406 13261427 -14643626 + AT_rich Low_complexity Low_complexity 1 21 0 5 686 22 56 0 0 chr3R 13262921 13262957 -14642096 + AT_rich Low_complexity Low_complexity 1 36 0 5 686 24 32 0 0 chr3R 13264155 13264186 -14640867 + AT_rich Low_complexity Low_complexity 1 31 0 5 686 207 167 0 0 chr3R 13264501 13264537 -14640516 + (CTG)n Simple_repeat Simple_repeat 1 36 0 5 686 21 95 0 0 chr3R 13266786 13266849 -14638204 + AT_rich Low_complexity Low_complexity 1 63 0 5 686 24 32 0 0 chr3R 13269177 13269208 -14635845 + AT_rich Low_complexity Low_complexity 1 31 0 5 686 24 32 0 0 chr3R 13270211 13270242 -14634811 + AT_rich Low_complexity Low_complexity 1 31 0 5 686 22 0 0 0 chr3R 13272147 13272169 -14632884 + AT_rich Low_complexity Low_complexity 1 22 0 5 686 29 47 0 0 chr3R 13272196 13272239 -14632814 + AT_rich Low_complexity Low_complexity 1 43 0 5 686 23 68 0 0 chr3R 13272770 13272814 -14632239 + AT_rich Low_complexity Low_complexity 1 44 0 5 686 24 0 0 0 chr3R 13272917 13272941 -14632112 + AT_rich Low_complexity Low_complexity 1 24 0 5 686 21 0 0 0 chr3R 13273668 13273689 -14631364 + AT_rich Low_complexity Low_complexity 1 21 0 5 686 207 0 0 0 chr3R 13274714 13274737 -14630316 + (GCTG)n Simple_repeat Simple_repeat 2 24 0 5 686 33 0 0 0 chr3R 13275164 13275197 -14629856 + AT_rich Low_complexity Low_complexity 1 33 0 5 686 25 31 0 0 chr3R 13275464 13275496 -14629557 + AT_rich Low_complexity Low_complexity 1 32 0 5 686 200 111 0 27 chr3R 13279319 13279356 -14625697 + (TCCCC)n Simple_repeat Simple_repeat 1 36 0 5 686 22 35 0 0 chr3R 13279775 13279804 -14625249 + AT_rich Low_complexity Low_complexity 1 29 0 5 686 21 0 0 0 chr3R 13282112 13282133 -14622920 + AT_rich Low_complexity Low_complexity 1 21 0 5 686 1620 0 0 0 chr3R 13282598 13282851 -14622202 + (TTA)n Simple_repeat Simple_repeat 1 253 0 5 686 21 0 0 0 chr3R 13288990 13289011 -14616042 + AT_rich Low_complexity Low_complexity 1 21 0 5 686 234 239 0 0 chr3R 13291625 13291692 -14613361 + (CTG)n Simple_repeat Simple_repeat 2 68 0 5 686 28 0 0 0 chr3R 13291869 13291897 -14613156 + AT_rich Low_complexity Low_complexity 1 28 0 5 686 208 222 0 0 chr3R 13293698 13293743 -14611310 + (TCCG)n Simple_repeat Simple_repeat 1 45 0 5 686 21 36 0 0 chr3R 13295392 13295420 -14609633 + AT_rich Low_complexity Low_complexity 1 28 0 5 686 186 118 0 0 chr3R 13299359 13299393 -14605660 + (GAATG)n Simple_repeat Simple_repeat 5 38 0 5 686 25 31 0 0 chr3R 13301651 13301683 -14603370 + AT_rich Low_complexity Low_complexity 1 32 0 5 686 34 0 0 0 chr3R 13302512 13302546 -14602507 + AT_rich Low_complexity Low_complexity 1 34 0 5 686 23 33 0 0 chr3R 13303961 13303991 -14601062 + AT_rich Low_complexity Low_complexity 1 30 0 5 686 23 0 0 0 chr3R 13307066 13307089 -14597964 + AT_rich Low_complexity Low_complexity 1 23 0 5 686 21 36 0 0 chr3R 13309268 13309296 -14595757 + AT_rich Low_complexity Low_complexity 1 28 0 5 686 180 125 0 0 chr3R 13313303 13313335 -14591718 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 5 686 21 57 0 0 chr3R 13313335 13313370 -14591683 + AT_rich Low_complexity Low_complexity 1 35 0 5 686 223 292 11 33 chr3R 13314351 13314443 -14590610 + (TA)n Simple_repeat Simple_repeat 2 91 0 5 686 294 106 0 0 chr3R 13314950 13314997 -14590056 + (AACTG)n Simple_repeat Simple_repeat 4 50 0 5 686 309 100 0 0 chr3R 13315270 13315320 -14589733 + (TCTG)n Simple_repeat Simple_repeat 1 50 0 5 686 28 29 0 0 chr3R 13318464 13318499 -14586554 + AT_rich Low_complexity Low_complexity 1 35 0 5 686 22 0 0 0 chr3R 13320950 13320972 -14584081 + AT_rich Low_complexity Low_complexity 1 22 0 5 686 234 0 0 0 chr3R 13321514 13321540 -14583513 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 686 25 65 0 0 chr3R 13322296 13322342 -14582711 + AT_rich Low_complexity Low_complexity 1 46 0 5 686 186 71 0 0 chr3R 13324070 13324098 -14580955 + (TTTAG)n Simple_repeat Simple_repeat 3 30 0 5 686 26 0 0 0 chr3R 13328795 13328821 -14576232 + AT_rich Low_complexity Low_complexity 1 26 0 5 686 61590 2 2 10 chr3R 13334997 13342488 -14562565 + DM412 LTR Gypsy 1 6897 0 5 686 22 0 0 0 chr3R 13345033 13345055 -14559998 + AT_rich Low_complexity Low_complexity 1 22 0 5 686 201 289 13 13 chr3R 13346020 13346097 -14558956 + (CCGGA)n Simple_repeat Simple_repeat 4 80 0 5 686 183 80 0 0 chr3R 13347265 13347290 -14557763 + (CAG)n Simple_repeat Simple_repeat 3 27 0 5 686 180 0 0 0 chr3R 13348066 13348086 -14556967 + (T)n Simple_repeat Simple_repeat 1 20 0 5 686 22 35 0 0 chr3R 13349110 13349139 -14555914 + AT_rich Low_complexity Low_complexity 1 29 0 5 686 25 31 0 0 chr3R 13351159 13351191 -14553862 + AT_rich Low_complexity Low_complexity 1 32 0 5 686 191 173 0 19 chr3R 13351715 13351768 -14553285 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 686 216 0 0 0 chr3R 13355938 13355962 -14549091 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 686 21 0 0 0 chr3R 13356346 13356367 -14548686 + AT_rich Low_complexity Low_complexity 1 21 0 5 686 216 211 0 19 chr3R 13360056 13360109 -14544944 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 686 263 274 0 0 chr3R 13364408 13364481 -14540572 + CT-rich Low_complexity Low_complexity 1 73 0 5 686 22 0 0 0 chr3R 13368714 13368736 -14536317 + AT_rich Low_complexity Low_complexity 1 22 0 5 687 226 267 13 13 chr3R 13370568 13370644 -14534409 + (CCG)n Simple_repeat Simple_repeat 2 77 0 5 687 180 0 0 0 chr3R 13373702 13373722 -14531331 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 687 32 26 0 0 chr3R 13374591 13374630 -14530423 + AT_rich Low_complexity Low_complexity 1 39 0 5 687 26 0 0 0 chr3R 13375115 13375141 -14529912 + AT_rich Low_complexity Low_complexity 1 26 0 5 687 242 211 0 26 chr3R 13375161 13375239 -14529814 + DNAREP1_DM LINE Penelope 212 287 -307 5 687 312 102 0 0 chr3R 13375872 13375921 -14529132 + (TCCA)n Simple_repeat Simple_repeat 2 50 0 5 687 201 139 0 0 chr3R 13381988 13382031 -14523022 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 687 249 108 0 0 chr3R 13382168 13382205 -14522848 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 687 25 0 0 0 chr3R 13382559 13382584 -14522469 + AT_rich Low_complexity Low_complexity 1 25 0 5 687 183 80 0 0 chr3R 13383012 13383037 -14522016 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 687 256 241 0 0 chr3R 13383492 13383550 -14521503 + CT-rich Low_complexity Low_complexity 2 59 0 5 687 26 0 0 0 chr3R 13383754 13383780 -14521273 + AT_rich Low_complexity Low_complexity 1 26 0 5 687 249 183 0 0 chr3R 13384716 13384776 -14520277 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 687 21 36 0 0 chr3R 13384977 13385005 -14520048 + AT_rich Low_complexity Low_complexity 1 28 0 5 687 210 156 0 0 chr3R 13385487 13385532 -14519521 + (CAG)n Simple_repeat Simple_repeat 1 45 0 5 687 201 175 0 0 chr3R 13385656 13385696 -14519357 + (CGG)n Simple_repeat Simple_repeat 1 40 0 5 687 230 302 0 0 chr3R 13385703 13385766 -14519287 + (CAG)n Simple_repeat Simple_repeat 2 64 0 5 687 202 105 25 50 chr3R 13391587 13391627 -14513426 + (CATAT)n Simple_repeat Simple_repeat 2 40 0 5 687 205 207 0 79 chr3R 13392397 13392460 -14512593 + (CATATA)n Simple_repeat Simple_repeat 4 61 0 5 687 204 40 0 0 chr3R 13392774 13392799 -14512254 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 687 341 189 0 0 chr3R 13392957 13393047 -14512006 + ROO_I LTR Pao 634 723 -7533 5 687 276 137 0 0 chr3R 13394401 13394452 -14510601 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 687 25 31 0 0 chr3R 13394642 13394674 -14510379 + AT_rich Low_complexity Low_complexity 1 32 0 5 687 25 75 0 0 chr3R 13394769 13394822 -14510231 + AT_rich Low_complexity Low_complexity 1 53 0 5 687 209 196 0 0 chr3R 13397131 13397177 -14507876 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 687 54 84 0 0 chr3R 13399469 13399600 -14505453 + AT_rich Low_complexity Low_complexity 1 131 0 5 687 260 265 0 35 chr3R 13400802 13400888 -14504165 + (CCCGAA)n Simple_repeat Simple_repeat 4 86 0 5 687 3761 0 0 0 chr3R 13401107 13401506 -14503547 + BLOOD_LTR LTR Gypsy 1 399 0 5 687 60533 0 0 0 chr3R 13401506 13408117 -14496936 + BLOOD_I LTR Gypsy 1 6613 0 5 687 3761 0 0 0 chr3R 13408117 13408516 -14496537 + BLOOD_LTR LTR Gypsy 1 399 0 5 687 192 40 0 0 chr3R 13409442 13409467 -14495586 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 687 21 57 0 0 chr3R 13411433 13411468 -14493585 + AT_rich Low_complexity Low_complexity 1 35 0 5 687 22 70 0 0 chr3R 13411507 13411550 -14493503 + AT_rich Low_complexity Low_complexity 1 43 0 5 687 22 80 0 0 chr3R 13415881 13415931 -14489122 + AT_rich Low_complexity Low_complexity 1 50 0 5 687 216 0 0 0 chr3R 13416470 13416494 -14488559 + (GTATG)n Simple_repeat Simple_repeat 2 25 0 5 687 3284 0 0 0 chr3R 13417077 13417438 -14487615 + FW_DM LINE Jockey 4332 4692 0 5 687 32 26 0 0 chr3R 13418978 13419017 -14486036 + AT_rich Low_complexity Low_complexity 1 39 0 5 687 24 0 0 0 chr3R 13419127 13419151 -14485902 + AT_rich Low_complexity Low_complexity 1 24 0 5 687 22 35 0 0 chr3R 13419580 13419609 -14485444 + AT_rich Low_complexity Low_complexity 1 29 0 5 687 243 61 0 0 chr3R 13423501 13423534 -14481519 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 687 21 0 0 0 chr3R 13426124 13426145 -14478908 + AT_rich Low_complexity Low_complexity 1 21 0 5 687 25 51 0 0 chr3R 13426175 13426214 -14478839 + AT_rich Low_complexity Low_complexity 1 39 0 5 687 252 235 0 29 chr3R 13427826 13427896 -14477157 + (GCTG)n Simple_repeat Simple_repeat 3 70 0 5 687 30 69 0 0 chr3R 13429247 13429305 -14475748 + AT_rich Low_complexity Low_complexity 1 58 0 5 687 204 193 35 0 chr3R 13429376 13429433 -14475620 + T-rich Low_complexity Low_complexity 2 60 0 5 687 216 97 0 0 chr3R 13429852 13429883 -14475170 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 687 25 51 0 0 chr3R 13430004 13430043 -14475010 + AT_rich Low_complexity Low_complexity 1 39 0 5 687 186 43 0 0 chr3R 13430654 13430677 -14474376 + (CTG)n Simple_repeat Simple_repeat 1 23 0 5 687 21 0 0 0 chr3R 13431502 13431523 -14473530 + AT_rich Low_complexity Low_complexity 1 21 0 5 687 26 0 0 0 chr3R 13434489 13434515 -14470538 + AT_rich Low_complexity Low_complexity 1 26 0 5 687 22 35 0 0 chr3R 13435937 13435966 -14469087 + AT_rich Low_complexity Low_complexity 1 29 0 5 687 24 0 0 0 chr3R 13437646 13437670 -14467383 + AT_rich Low_complexity Low_complexity 1 24 0 5 687 35 41 0 0 chr3R 13437794 13437843 -14467210 + AT_rich Low_complexity Low_complexity 1 49 0 5 687 28 29 0 0 chr3R 13438337 13438372 -14466681 + AT_rich Low_complexity Low_complexity 1 35 0 5 687 203 301 0 0 chr3R 13440343 13440436 -14464617 + GA-rich Low_complexity Low_complexity 1 93 0 5 687 21 36 0 0 chr3R 13443352 13443380 -14461673 + AT_rich Low_complexity Low_complexity 1 28 0 5 687 43 47 0 0 chr3R 13445776 13445840 -14459213 + AT_rich Low_complexity Low_complexity 1 64 0 5 687 25 0 0 0 chr3R 13449696 13449721 -14455332 + AT_rich Low_complexity Low_complexity 1 25 0 5 687 21 0 0 0 chr3R 13451235 13451256 -14453797 + AT_rich Low_complexity Low_complexity 1 21 0 5 687 22 35 0 0 chr3R 13458500 13458529 -14446524 + AT_rich Low_complexity Low_complexity 1 29 0 5 687 180 0 0 0 chr3R 13458662 13458682 -14446371 + (G)n Simple_repeat Simple_repeat 1 20 0 5 687 186 43 0 0 chr3R 13459331 13459354 -14445699 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 687 208 245 0 0 chr3R 13460537 13460590 -14444463 + T-rich Low_complexity Low_complexity 2 54 0 5 687 3985 5 0 0 chr3R 13464094 13464522 -14440531 + ROO_LTR LTR Pao 1 428 0 5 687 234 0 0 0 chr3R 13467217 13467243 -14437810 + (CAT)n Simple_repeat Simple_repeat 1 26 0 5 687 198 0 0 0 chr3R 13468828 13468850 -14436203 + (CATA)n Simple_repeat Simple_repeat 3 24 0 5 687 207 0 0 0 chr3R 13469481 13469504 -14435549 + (A)n Simple_repeat Simple_repeat 1 23 0 5 687 21 36 0 0 chr3R 13469632 13469660 -14435393 + AT_rich Low_complexity Low_complexity 1 28 0 5 687 33 25 0 0 chr3R 13470633 13470673 -14434380 + AT_rich Low_complexity Low_complexity 1 40 0 5 687 654 155 114 36 chr3R 13471602 13471769 -14433284 + DNAREP1_DM LINE Penelope 415 594 0 5 687 25 0 0 0 chr3R 13472188 13472213 -14432840 + AT_rich Low_complexity Low_complexity 1 25 0 5 687 25 51 0 0 chr3R 13472258 13472297 -14432756 + AT_rich Low_complexity Low_complexity 1 39 0 5 687 22 35 0 0 chr3R 13473126 13473155 -14431898 + AT_rich Low_complexity Low_complexity 1 29 0 5 687 266 0 29 0 chr3R 13474029 13474063 -14430990 + (TTA)n Simple_repeat Simple_repeat 3 37 0 5 687 29 47 0 0 chr3R 13477647 13477690 -14427363 + AT_rich Low_complexity Low_complexity 1 43 0 5 687 21 0 0 0 chr3R 13481291 13481312 -14423741 + AT_rich Low_complexity Low_complexity 1 21 0 5 687 22 56 0 0 chr3R 13482333 13482369 -14422684 + AT_rich Low_complexity Low_complexity 1 36 0 5 687 339 250 0 0 chr3R 13483415 13483495 -14421558 + DNAREP1_DM LINE Penelope 515 594 0 5 687 201 74 0 0 chr3R 13489976 13490003 -14415050 + (CCA)n Simple_repeat Simple_repeat 2 28 0 5 687 30 27 0 0 chr3R 13491193 13491230 -14413823 + AT_rich Low_complexity Low_complexity 1 37 0 5 687 23 33 0 0 chr3R 13494076 13494106 -14410947 + AT_rich Low_complexity Low_complexity 1 30 0 5 687 22 0 0 0 chr3R 13495700 13495722 -14409331 + AT_rich Low_complexity Low_complexity 1 22 0 5 687 25 51 0 0 chr3R 13496851 13496890 -14408163 + AT_rich Low_complexity Low_complexity 1 39 0 5 688 235 306 0 0 chr3R 13500902 13500964 -14404089 - ROO_I LTR Pao -7532 724 663 5 688 214 133 22 22 chr3R 13507449 13507495 -14397558 + (CTCTG)n Simple_repeat Simple_repeat 3 48 0 5 688 24 0 0 0 chr3R 13509510 13509534 -14395519 + AT_rich Low_complexity Low_complexity 1 24 0 5 688 24 32 0 0 chr3R 13511414 13511445 -14393608 + AT_rich Low_complexity Low_complexity 1 31 0 5 688 25 0 0 0 chr3R 13511503 13511528 -14393525 + AT_rich Low_complexity Low_complexity 1 25 0 5 688 21 36 0 0 chr3R 13513355 13513383 -14391670 + AT_rich Low_complexity Low_complexity 1 28 0 5 688 25 0 0 0 chr3R 13513544 13513569 -14391484 + AT_rich Low_complexity Low_complexity 1 25 0 5 688 199 114 45 0 chr3R 13514021 13514065 -14390988 + T-rich Low_complexity Low_complexity 1 46 0 5 688 202 209 0 0 chr3R 13514766 13514809 -14390244 + (TATG)n Simple_repeat Simple_repeat 2 44 0 5 688 26 0 0 0 chr3R 13514863 13514889 -14390164 + AT_rich Low_complexity Low_complexity 1 26 0 5 688 214 239 20 61 chr3R 13515645 13515743 -14389310 + (CTG)n Simple_repeat Simple_repeat 1 94 0 5 688 487 296 0 12 chr3R 13515756 13515927 -14389126 + (CTG)n Simple_repeat Simple_repeat 1 169 0 5 688 189 196 0 0 chr3R 13518926 13518977 -14386076 + (CTG)n Simple_repeat Simple_repeat 1 51 0 5 688 235 297 0 0 chr3R 13520711 13520802 -14384251 + (CTG)n Simple_repeat Simple_repeat 1 91 0 5 688 209 33 33 0 chr3R 13523295 13523325 -14381728 + (GTTTG)n Simple_repeat Simple_repeat 4 34 0 5 688 24 67 0 0 chr3R 13526241 13526286 -14378767 + AT_rich Low_complexity Low_complexity 1 45 0 5 688 210 71 0 0 chr3R 13526438 13526466 -14378587 + (CGAA)n Simple_repeat Simple_repeat 3 30 0 5 688 206 176 0 38 chr3R 13526542 13526595 -14378458 + (GGATG)n Simple_repeat Simple_repeat 1 51 0 5 688 203 179 0 0 chr3R 13526632 13526689 -14378364 + (CCAA)n Simple_repeat Simple_repeat 1 57 0 5 688 207 0 0 0 chr3R 13527135 13527158 -14377895 + (CAAG)n Simple_repeat Simple_repeat 3 25 0 5 688 234 0 0 0 chr3R 13527308 13527334 -14377719 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 688 195 42 0 0 chr3R 13528719 13528743 -14376310 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 688 192 125 0 0 chr3R 13529436 13529468 -14375585 + (TTTCG)n Simple_repeat Simple_repeat 3 34 0 5 688 201 172 29 88 chr3R 13529792 13529894 -14375159 + (CAAGC)n Simple_repeat Simple_repeat 3 98 0 5 688 220 213 21 0 chr3R 13529881 13529928 -14375125 + (ACTCG)n Simple_repeat Simple_repeat 5 52 0 5 688 180 111 0 0 chr3R 13530314 13530341 -14374712 + (CCG)n Simple_repeat Simple_repeat 2 28 0 5 688 276 100 0 0 chr3R 13533955 13533995 -14371058 + (CTG)n Simple_repeat Simple_repeat 3 42 0 5 688 198 71 0 0 chr3R 13535504 13535532 -14369521 + (CAGGC)n Simple_repeat Simple_repeat 5 32 0 5 688 191 133 22 0 chr3R 13536466 13536511 -14368542 + (CAAGG)n Simple_repeat Simple_repeat 2 47 0 5 688 203 297 0 15 chr3R 13536595 13536660 -14368393 + (CGA)n Simple_repeat Simple_repeat 2 65 0 5 688 227 182 0 0 chr3R 13536919 13536963 -14368090 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 688 273 57 0 0 chr3R 13539148 13539183 -14365870 + (CATCG)n Simple_repeat Simple_repeat 3 37 0 5 688 183 80 0 0 chr3R 13540656 13540681 -14364372 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 688 198 118 0 0 chr3R 13543063 13543097 -14361956 + (CTCG)n Simple_repeat Simple_repeat 3 36 0 5 688 217 227 0 0 chr3R 13543459 13543503 -14361550 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 688 25 0 0 0 chr3R 13544543 13544568 -14360485 + AT_rich Low_complexity Low_complexity 1 25 0 5 688 23 0 0 0 chr3R 13544886 13544909 -14360144 + AT_rich Low_complexity Low_complexity 1 23 0 5 688 31 76 0 0 chr3R 13544992 13545058 -14359995 + AT_rich Low_complexity Low_complexity 1 66 0 5 688 34 93 0 0 chr3R 13545608 13545705 -14359348 + AT_rich Low_complexity Low_complexity 1 97 0 5 688 22 0 0 0 chr3R 13547582 13547604 -14357449 + AT_rich Low_complexity Low_complexity 1 22 0 5 688 26 50 0 0 chr3R 13551164 13551204 -14353849 + AT_rich Low_complexity Low_complexity 1 40 0 5 688 25 31 0 0 chr3R 13560539 13560571 -14344482 + AT_rich Low_complexity Low_complexity 1 32 0 5 688 400 59 0 29 chr3R 13560607 13560677 -14344376 + (TTA)n Simple_repeat Simple_repeat 2 69 0 5 688 200 114 29 0 chr3R 13561235 13561270 -14343783 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 688 270 56 0 0 chr3R 13562312 13562348 -14342705 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 688 225 242 0 0 chr3R 13562926 13562992 -14342061 + (CCAA)n Simple_repeat Simple_repeat 3 68 0 5 688 233 227 15 15 chr3R 13564049 13564116 -14340937 + (CCCA)n Simple_repeat Simple_repeat 2 68 0 5 688 25 31 0 0 chr3R 13564444 13564476 -14340577 + AT_rich Low_complexity Low_complexity 1 32 0 5 688 29 70 0 0 chr3R 13566442 13566499 -14338554 + AT_rich Low_complexity Low_complexity 1 57 0 5 688 212 113 36 36 chr3R 13567724 13567779 -14337274 + (TATAA)n Simple_repeat Simple_repeat 4 58 0 5 688 330 235 70 77 chr3R 13569070 13569213 -14335840 + DNAREP1_DM LINE Penelope 191 332 -262 5 688 192 40 0 0 chr3R 13571158 13571183 -14333870 + (CCA)n Simple_repeat Simple_repeat 2 26 0 5 688 26 30 0 0 chr3R 13574477 13574510 -14330543 + AT_rich Low_complexity Low_complexity 1 33 0 5 688 195 42 0 0 chr3R 13576710 13576734 -14328319 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 688 222 136 0 0 chr3R 13582692 13582736 -14322317 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 688 206 118 0 0 chr3R 13583082 13583116 -14321937 + (TCC)n Simple_repeat Simple_repeat 3 36 0 5 688 29 0 0 0 chr3R 13584271 13584300 -14320753 + AT_rich Low_complexity Low_complexity 1 29 0 5 688 291 136 0 0 chr3R 13587146 13587205 -14317848 + (A)n Simple_repeat Simple_repeat 1 59 0 5 688 35 0 0 0 chr3R 13587977 13588012 -14317041 + AT_rich Low_complexity Low_complexity 1 35 0 5 688 4017 0 0 0 chr3R 13588939 13589367 -14315686 - ROO_LTR LTR Pao 0 428 1 5 688 189 0 0 0 chr3R 13589990 13590011 -14315042 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 5 688 204 97 0 0 chr3R 13594269 13594300 -14310753 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 688 280 157 10 73 chr3R 13599787 13599883 -14305170 - ROO_I LTR Pao -7522 734 645 5 688 242 145 113 0 chr3R 13601884 13601946 -14303107 - ROO_I LTR Pao -7529 727 659 5 688 205 179 0 0 chr3R 13602157 13602196 -14302857 + GA-rich Low_complexity Low_complexity 1 39 0 5 688 250 258 16 0 chr3R 13602869 13602931 -14302122 + (CGAAA)n Simple_repeat Simple_repeat 2 64 0 5 688 216 86 0 0 chr3R 13606079 13606114 -14298939 + (CCA)n Simple_repeat Simple_repeat 3 37 0 5 688 279 114 0 0 chr3R 13608671 13608715 -14296338 + (CTG)n Simple_repeat Simple_repeat 1 44 0 5 688 237 108 0 0 chr3R 13608810 13608847 -14296206 + (CTG)n Simple_repeat Simple_repeat 3 39 0 5 688 368 211 0 0 chr3R 13609058 13609162 -14295891 - ROO_I LTR Pao -7512 744 641 5 688 297 151 0 0 chr3R 13609318 13609371 -14295682 + (TTG)n Simple_repeat Simple_repeat 3 55 0 5 688 276 100 0 0 chr3R 13613947 13613987 -14291066 + (CAGT)n Simple_repeat Simple_repeat 3 42 0 5 688 241 309 24 12 chr3R 13616235 13616317 -14288736 + G-rich Low_complexity Low_complexity 2 84 0 5 688 198 128 0 0 chr3R 13618521 13618560 -14286493 + (TCC)n Simple_repeat Simple_repeat 2 40 0 5 688 225 154 0 37 chr3R 13619316 13619370 -14285683 + T-rich Low_complexity Low_complexity 3 54 0 5 688 219 69 0 0 chr3R 13619976 13620005 -14285048 + (ATTCG)n Simple_repeat Simple_repeat 1 29 0 5 688 33 94 0 0 chr3R 13620412 13620508 -14284545 + AT_rich Low_complexity Low_complexity 1 96 0 5 688 30 27 0 0 chr3R 13620635 13620672 -14284381 + AT_rich Low_complexity Low_complexity 1 37 0 5 688 24 0 0 0 chr3R 13621933 13621957 -14283096 + AT_rich Low_complexity Low_complexity 1 24 0 5 688 47 19 0 0 chr3R 13624446 13624500 -14280553 + AT_rich Low_complexity Low_complexity 1 54 0 5 688 22 0 0 0 chr3R 13624606 13624628 -14280425 + AT_rich Low_complexity Low_complexity 1 22 0 5 688 31 0 0 0 chr3R 13624701 13624732 -14280321 + AT_rich Low_complexity Low_complexity 1 31 0 5 688 347 119 102 0 chr3R 13627344 13627403 -14277650 + DNAREP1_DM LINE Penelope 1 65 -529 5 688 21 36 0 0 chr3R 13631118 13631146 -14273907 + AT_rich Low_complexity Low_complexity 1 28 0 5 689 31 0 0 0 chr3R 13633020 13633051 -14272002 + AT_rich Low_complexity Low_complexity 1 31 0 5 689 21 0 0 0 chr3R 13633134 13633155 -14271898 + AT_rich Low_complexity Low_complexity 1 21 0 5 689 23 68 0 0 chr3R 13634850 13634894 -14270159 + AT_rich Low_complexity Low_complexity 1 44 0 5 689 35 88 0 0 chr3R 13638770 13638861 -14266192 + AT_rich Low_complexity Low_complexity 1 91 0 5 689 192 97 0 0 chr3R 13639397 13639428 -14265625 + (TGGA)n Simple_repeat Simple_repeat 1 31 0 5 689 22 0 0 0 chr3R 13640177 13640199 -14264854 + AT_rich Low_complexity Low_complexity 1 22 0 5 689 375 185 0 0 chr3R 13641115 13641207 -14263846 + (ACTG)n Simple_repeat Simple_repeat 3 94 0 5 689 24 32 0 0 chr3R 13641578 13641609 -14263444 + AT_rich Low_complexity Low_complexity 1 31 0 5 689 24 32 0 0 chr3R 13643025 13643056 -14261997 + AT_rich Low_complexity Low_complexity 1 31 0 5 689 23 33 0 0 chr3R 13646738 13646768 -14258285 + AT_rich Low_complexity Low_complexity 1 30 0 5 689 276 30 0 0 chr3R 13647309 13647342 -14257711 + (TTG)n Simple_repeat Simple_repeat 3 35 0 5 689 25 31 0 0 chr3R 13647681 13647713 -14257340 + AT_rich Low_complexity Low_complexity 1 32 0 5 689 231 88 0 0 chr3R 13649991 13650025 -14255028 + (CAT)n Simple_repeat Simple_repeat 3 36 0 5 689 261 109 0 0 chr3R 13650372 13650418 -14254635 + (CAATC)n Simple_repeat Simple_repeat 5 50 0 5 689 25 90 0 0 chr3R 13650951 13651018 -14254035 + AT_rich Low_complexity Low_complexity 1 67 0 5 689 22 0 0 0 chr3R 13656266 13656288 -14248765 + AT_rich Low_complexity Low_complexity 1 22 0 5 689 22 56 0 0 chr3R 13656368 13656404 -14248649 + AT_rich Low_complexity Low_complexity 1 36 0 5 689 25 0 0 0 chr3R 13659345 13659370 -14245683 + AT_rich Low_complexity Low_complexity 1 25 0 5 689 21 36 0 0 chr3R 13661659 13661687 -14243366 + AT_rich Low_complexity Low_complexity 1 28 0 5 689 228 149 0 0 chr3R 13662757 13662804 -14242249 + (CAA)n Simple_repeat Simple_repeat 1 47 0 5 689 195 100 0 0 chr3R 13663353 13663383 -14241670 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 689 615 111 0 66 chr3R 13663535 13663641 -14241412 - DNAREP1_DM LINE Penelope 0 594 496 5 689 578 70 0 0 chr3R 13663640 13663711 -14241342 - DNAREP1_DM LINE Penelope -522 72 2 5 689 21 57 0 0 chr3R 13666395 13666430 -14238623 + AT_rich Low_complexity Low_complexity 1 35 0 5 689 22 0 0 0 chr3R 13667980 13668002 -14237051 + AT_rich Low_complexity Low_complexity 1 22 0 5 689 186 118 0 0 chr3R 13669261 13669295 -14235758 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 689 23 54 0 0 chr3R 13670517 13670554 -14234499 + AT_rich Low_complexity Low_complexity 1 37 0 5 689 27 0 0 0 chr3R 13674283 13674310 -14230743 + AT_rich Low_complexity Low_complexity 1 27 0 5 689 26 30 0 0 chr3R 13675858 13675891 -14229162 + AT_rich Low_complexity Low_complexity 1 33 0 5 689 24 67 0 0 chr3R 13676451 13676496 -14228557 + AT_rich Low_complexity Low_complexity 1 45 0 5 689 213 39 0 0 chr3R 13677886 13677912 -14227141 + (CAG)n Simple_repeat Simple_repeat 1 26 0 5 689 22 0 0 0 chr3R 13680354 13680376 -14224677 + AT_rich Low_complexity Low_complexity 1 22 0 5 689 204 40 0 0 chr3R 13681793 13681818 -14223235 + (CAAAC)n Simple_repeat Simple_repeat 1 25 0 5 689 240 284 11 0 chr3R 13684839 13684927 -14220126 + (CAAA)n Simple_repeat Simple_repeat 1 89 0 5 689 288 0 0 0 chr3R 13685868 13685900 -14219153 + (CAGG)n Simple_repeat Simple_repeat 1 32 0 5 689 23 0 0 0 chr3R 13687195 13687218 -14217835 + AT_rich Low_complexity Low_complexity 1 23 0 5 689 183 203 0 0 chr3R 13690729 13690788 -14214265 + (CAA)n Simple_repeat Simple_repeat 3 61 0 5 689 185 132 26 0 chr3R 13693833 13693871 -14211182 + (TTG)n Simple_repeat Simple_repeat 3 41 0 5 689 282 56 0 0 chr3R 13694427 13694463 -14210590 + (CAG)n Simple_repeat Simple_repeat 1 36 0 5 689 183 42 0 0 chr3R 13694823 13694847 -14210206 + (CAG)n Simple_repeat Simple_repeat 1 24 0 5 689 21 0 0 0 chr3R 13696966 13696987 -14208066 + AT_rich Low_complexity Low_complexity 1 21 0 5 689 30 27 0 0 chr3R 13698126 13698163 -14206890 + AT_rich Low_complexity Low_complexity 1 37 0 5 689 209 204 0 0 chr3R 13698492 13698541 -14206512 + T-rich Low_complexity Low_complexity 1 49 0 5 689 192 163 0 0 chr3R 13700531 13700574 -14204479 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 689 215 236 0 0 chr3R 13700723 13700778 -14204275 + T-rich Low_complexity Low_complexity 1 55 0 5 689 22 0 0 0 chr3R 13700847 13700869 -14204184 + AT_rich Low_complexity Low_complexity 1 22 0 5 689 201 288 0 0 chr3R 13703671 13703730 -14201323 + (TGG)n Simple_repeat Simple_repeat 2 60 0 5 689 235 125 0 67 chr3R 13704343 13704403 -14200650 + (CAGAGA)n Simple_repeat Simple_repeat 2 57 0 5 689 189 74 0 0 chr3R 13705190 13705217 -14199836 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 689 272 27 0 26 chr3R 13705502 13705540 -14199513 + (TTG)n Simple_repeat Simple_repeat 1 37 0 5 689 188 81 0 75 chr3R 13706827 13706867 -14198186 + (AGTAG)n Simple_repeat Simple_repeat 4 40 0 5 689 231 114 0 0 chr3R 13707394 13707429 -14197624 + (ATTG)n Simple_repeat Simple_repeat 4 38 0 5 689 262 242 0 18 chr3R 13708004 13708170 -14196883 + (TTG)n Simple_repeat Simple_repeat 1 162 0 5 689 228 86 0 0 chr3R 13708203 13708238 -14196815 + (TTG)n Simple_repeat Simple_repeat 3 37 0 5 689 230 248 24 40 chr3R 13708255 13708381 -14196672 + (TTG)n Simple_repeat Simple_repeat 1 124 0 5 689 204 111 0 0 chr3R 13708561 13708597 -14196456 + (TTG)n Simple_repeat Simple_repeat 1 36 0 5 689 21 36 0 0 chr3R 13714659 13714687 -14190366 + AT_rich Low_complexity Low_complexity 1 28 0 5 689 321 47 0 0 chr3R 13715248 13715291 -14189762 + (TTG)n Simple_repeat Simple_repeat 2 44 0 5 689 214 158 0 0 chr3R 13715581 13715619 -14189434 + (TTG)n Simple_repeat Simple_repeat 1 38 0 5 689 206 213 0 0 chr3R 13716857 13716904 -14188149 + (TGG)n Simple_repeat Simple_repeat 2 48 0 5 689 263 269 0 0 chr3R 13716932 13716999 -14188054 + G-rich Low_complexity Low_complexity 1 67 0 5 689 234 156 0 0 chr3R 13716999 13717044 -14188009 + (CTG)n Simple_repeat Simple_repeat 2 46 0 5 689 205 237 0 0 chr3R 13717969 13718007 -14187046 + (CCG)n Simple_repeat Simple_repeat 1 38 0 5 689 216 0 0 0 chr3R 13719430 13719454 -14185599 + (T)n Simple_repeat Simple_repeat 1 24 0 5 689 228 143 0 0 chr3R 13719504 13719546 -14185507 + (GA)n Simple_repeat Simple_repeat 2 43 0 5 689 201 94 0 0 chr3R 13720199 13720231 -14184822 + (CTG)n Simple_repeat Simple_repeat 3 34 0 5 689 204 97 0 0 chr3R 13720513 13720544 -14184509 + (CCA)n Simple_repeat Simple_repeat 2 32 0 5 689 180 77 0 0 chr3R 13722732 13722758 -14182295 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 689 217 279 14 54 chr3R 13722954 13723136 -14181917 + A-rich Low_complexity Low_complexity 1 174 0 5 689 329 164 0 14 chr3R 13723312 13723386 -14181667 + (TTG)n Simple_repeat Simple_repeat 3 75 0 5 689 213 39 0 0 chr3R 13723610 13723636 -14181417 + (CAT)n Simple_repeat Simple_repeat 2 27 0 5 689 279 212 0 0 chr3R 13723779 13723864 -14181189 + (CA)n Simple_repeat Simple_repeat 1 85 0 5 689 225 132 0 0 chr3R 13723953 13723991 -14181062 + (CAA)n Simple_repeat Simple_repeat 2 39 0 5 689 200 143 0 23 chr3R 13724117 13724160 -14180893 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 689 288 0 0 0 chr3R 13727065 13727097 -14177956 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 689 212 100 0 24 chr3R 13729925 13729966 -14175087 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 689 274 230 0 0 chr3R 13730925 13730999 -14174054 + (CTG)n Simple_repeat Simple_repeat 1 74 0 5 689 277 171 0 64 chr3R 13731017 13731111 -14173942 - ROO_I LTR Pao -7529 727 640 5 689 238 235 20 20 chr3R 13731414 13731514 -14173539 + (CTG)n Simple_repeat Simple_repeat 1 100 0 5 689 211 135 0 26 chr3R 13735203 13735241 -14169812 + (TTG)n Simple_repeat Simple_repeat 1 37 0 5 689 222 37 0 0 chr3R 13736182 13736209 -14168844 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 689 21 0 0 0 chr3R 13736994 13737015 -14168038 + AT_rich Low_complexity Low_complexity 1 21 0 5 689 222 91 0 0 chr3R 13738007 13738040 -14167013 + (CAA)n Simple_repeat Simple_repeat 1 33 0 5 689 255 79 0 0 chr3R 13740107 13740145 -14164908 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 689 210 163 0 23 chr3R 13740179 13740223 -14164830 + (CATCC)n Simple_repeat Simple_repeat 4 46 0 5 689 236 244 10 115 chr3R 13741988 13742196 -14162857 - ROO_I LTR Pao -7427 829 644 5 689 208 203 14 28 chr3R 13742232 13742303 -14162750 + (CGA)n Simple_repeat Simple_repeat 1 70 0 5 689 189 0 0 0 chr3R 13742453 13742474 -14162579 + (TC)n Simple_repeat Simple_repeat 1 21 0 5 689 27 73 0 0 chr3R 13743589 13743644 -14161409 + AT_rich Low_complexity Low_complexity 1 55 0 5 689 195 100 0 0 chr3R 13743974 13744004 -14161049 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 689 31 58 0 0 chr3R 13744569 13744621 -14160432 + AT_rich Low_complexity Low_complexity 1 52 0 5 689 38 98 0 0 chr3R 13744719 13744841 -14160212 + AT_rich Low_complexity Low_complexity 1 122 0 5 689 180 111 0 0 chr3R 13747718 13747745 -14157308 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 689 192 158 0 0 chr3R 13750705 13750743 -14154310 + (CAGC)n Simple_repeat Simple_repeat 2 39 0 5 689 4650 2 2 10 chr3R 13751632 13752142 -14152911 - HOBO DNA hAT 0 3016 2511 5 689 8493 1 0 0 chr3R 13752134 13753038 -14152015 - HOBO DNA hAT -2112 904 1 5 689 234 136 0 0 chr3R 13754689 13754733 -14150320 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 689 22 35 0 0 chr3R 13755493 13755522 -14149531 + AT_rich Low_complexity Low_complexity 1 29 0 5 689 230 173 19 0 chr3R 13756815 13756867 -14148186 + (CCCA)n Simple_repeat Simple_repeat 2 54 0 5 689 21 0 0 0 chr3R 13758134 13758155 -14146898 + AT_rich Low_complexity Low_complexity 1 21 0 5 689 267 31 0 0 chr3R 13758197 13758229 -14146824 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 690 192 40 0 0 chr3R 13764589 13764614 -14140439 + (CAA)n Simple_repeat Simple_repeat 3 27 0 5 690 201 196 0 0 chr3R 13765824 13765870 -14139183 + (CAGTT)n Simple_repeat Simple_repeat 4 49 0 5 690 23 68 0 0 chr3R 13766902 13766946 -14138107 + AT_rich Low_complexity Low_complexity 1 44 0 5 690 200 194 0 0 chr3R 13768799 13768835 -14136218 + GA-rich Low_complexity Low_complexity 2 37 0 5 690 22 56 0 0 chr3R 13770544 13770580 -14134473 + AT_rich Low_complexity Low_complexity 1 36 0 5 690 240 35 0 0 chr3R 13772697 13772726 -14132327 + (CTG)n Simple_repeat Simple_repeat 3 31 0 5 690 183 80 0 0 chr3R 13774288 13774313 -14130740 + (T)n Simple_repeat Simple_repeat 1 25 0 5 690 270 125 0 0 chr3R 13774926 13774974 -14130079 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 690 24 0 0 0 chr3R 13775183 13775207 -14129846 + AT_rich Low_complexity Low_complexity 1 24 0 5 690 228 86 0 0 chr3R 13776086 13776121 -14128932 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 690 207 0 0 0 chr3R 13778363 13778386 -14126667 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 690 213 154 0 0 chr3R 13779923 13779962 -14125091 + (CAT)n Simple_repeat Simple_repeat 3 41 0 5 690 271 241 0 0 chr3R 13780092 13780146 -14124907 + (CCCCAG)n Simple_repeat Simple_repeat 1 54 0 5 690 198 0 0 0 chr3R 13780292 13780314 -14124739 + (CAG)n Simple_repeat Simple_repeat 3 24 0 5 690 264 143 0 0 chr3R 13782321 13782377 -14122676 + (TTGG)n Simple_repeat Simple_repeat 3 58 0 5 690 180 77 0 0 chr3R 13785619 13785645 -14119408 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 690 216 143 0 0 chr3R 13787967 13788009 -14117044 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 690 22 35 0 0 chr3R 13788741 13788770 -14116283 + AT_rich Low_complexity Low_complexity 1 29 0 5 690 180 0 0 0 chr3R 13789382 13789402 -14115651 + (CAT)n Simple_repeat Simple_repeat 2 21 0 5 690 25 31 0 0 chr3R 13789806 13789838 -14115215 + AT_rich Low_complexity Low_complexity 1 32 0 5 690 192 135 0 0 chr3R 13792260 13792297 -14112756 + (CCG)n Simple_repeat Simple_repeat 1 37 0 5 690 231 161 45 11 chr3R 13792775 13792863 -14112190 + ROO_I LTR Pao 640 730 -7526 5 690 201 74 0 0 chr3R 13792895 13792922 -14112131 + (CAG)n Simple_repeat Simple_repeat 3 29 0 5 690 238 250 12 0 chr3R 13792944 13793024 -14112029 + (CAG)n Simple_repeat Simple_repeat 3 83 0 5 690 241 200 10 87 chr3R 13793045 13793149 -14111904 + ROO_I LTR Pao 637 732 -7524 5 690 249 221 89 25 chr3R 13793122 13793201 -14111852 + TART LINE telomeric 12145 12228 -2249 5 690 268 143 0 140 chr3R 13793347 13793461 -14111592 + ROO_I LTR Pao 641 738 -7518 5 690 232 238 0 0 chr3R 13794546 13794609 -14110444 + (CCAA)n Simple_repeat Simple_repeat 4 66 0 5 690 23 33 0 0 chr3R 13798716 13798746 -14106307 + AT_rich Low_complexity Low_complexity 1 30 0 5 690 230 200 18 0 chr3R 13801187 13801242 -14103811 + (CAA)n Simple_repeat Simple_repeat 2 57 0 5 690 213 39 0 0 chr3R 13801998 13802024 -14103029 + (CAA)n Simple_repeat Simple_repeat 1 26 0 5 690 207 70 91 23 chr3R 13802276 13802320 -14102733 + (CTATA)n Simple_repeat Simple_repeat 3 49 0 5 690 218 32 32 0 chr3R 13804309 13804340 -14100713 + (CAG)n Simple_repeat Simple_repeat 1 32 0 5 690 21 36 0 0 chr3R 13804656 13804684 -14100369 + AT_rich Low_complexity Low_complexity 1 28 0 5 690 183 100 0 0 chr3R 13806975 13807005 -14098048 + (TCC)n Simple_repeat Simple_repeat 3 32 0 5 690 225 0 0 0 chr3R 13808430 13808455 -14096598 + (CATA)n Simple_repeat Simple_repeat 4 28 0 5 690 209 184 0 0 chr3R 13811462 13811500 -14093553 + (CAG)n Simple_repeat Simple_repeat 3 40 0 5 690 309 145 15 120 chr3R 13811551 13811684 -14093369 - ROO_I LTR Pao -7497 759 641 5 690 27 62 0 0 chr3R 13813136 13813184 -14091869 + AT_rich Low_complexity Low_complexity 1 48 0 5 690 33 56 0 0 chr3R 13814287 13814341 -14090712 + AT_rich Low_complexity Low_complexity 1 54 0 5 690 189 0 0 0 chr3R 13819117 13819138 -14085915 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 5 690 206 238 16 0 chr3R 13819177 13819240 -14085813 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 690 180 135 0 0 chr3R 13823071 13823108 -14081945 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 690 225 65 0 0 chr3R 13823715 13823746 -14081307 + (TC)n Simple_repeat Simple_repeat 2 32 0 5 690 237 33 0 0 chr3R 13824680 13824710 -14080343 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 690 212 184 0 0 chr3R 13825040 13825078 -14079975 + T-rich Low_complexity Low_complexity 1 38 0 5 690 180 0 0 0 chr3R 13825885 13825905 -14079148 + (TCTCCC)n Simple_repeat Simple_repeat 6 25 0 5 690 333 100 0 0 chr3R 13827787 13827837 -14077216 + (GAAAA)n Simple_repeat Simple_repeat 1 50 0 5 690 242 160 20 0 chr3R 13828782 13828832 -14076221 + (CAA)n Simple_repeat Simple_repeat 1 51 0 5 690 21 36 0 0 chr3R 13829098 13829126 -14075927 + AT_rich Low_complexity Low_complexity 1 28 0 5 690 21 57 0 0 chr3R 13829426 13829461 -14075592 + AT_rich Low_complexity Low_complexity 1 35 0 5 690 219 69 0 0 chr3R 13832140 13832169 -14072884 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 690 22 0 0 0 chr3R 13832387 13832409 -14072644 + GC_rich Low_complexity Low_complexity 1 22 0 5 690 182 91 30 0 chr3R 13833390 13833423 -14071630 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 690 296 274 0 0 chr3R 13833491 13833586 -14071467 + CT-rich Low_complexity Low_complexity 2 96 0 5 690 226 229 0 16 chr3R 13833675 13833737 -14071316 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 690 200 213 0 0 chr3R 13834737 13834784 -14070269 + A-rich Low_complexity Low_complexity 1 47 0 5 690 27 0 0 0 chr3R 13835088 13835115 -14069938 + AT_rich Low_complexity Low_complexity 1 27 0 5 690 26 50 0 0 chr3R 13835497 13835537 -14069516 + AT_rich Low_complexity Low_complexity 1 40 0 5 690 237 260 10 39 chr3R 13836018 13836122 -14068931 + (CTG)n Simple_repeat Simple_repeat 3 103 0 5 690 249 293 20 10 chr3R 13836812 13836912 -14068141 + (CAG)n Simple_repeat Simple_repeat 1 101 0 5 690 204 279 0 47 chr3R 13837070 13837134 -14067919 + (CCA)n Simple_repeat Simple_repeat 2 62 0 5 690 320 171 0 64 chr3R 13837201 13837295 -14067758 + ROO_I LTR Pao 641 728 -7528 5 690 365 92 0 50 chr3R 13837792 13837872 -14067181 + (CAA)n Simple_repeat Simple_repeat 3 78 0 5 690 21 0 0 0 chr3R 13838492 13838513 -14066540 + AT_rich Low_complexity Low_complexity 1 21 0 5 690 22 70 0 0 chr3R 13838621 13838664 -14066389 + AT_rich Low_complexity Low_complexity 1 43 0 5 690 235 85 21 21 chr3R 13838959 13839007 -14066046 + (CAG)n Simple_repeat Simple_repeat 3 50 0 5 690 259 194 10 10 chr3R 13839020 13839124 -14065929 + ROO_I LTR Pao 644 747 -7509 5 690 207 100 0 0 chr3R 13839124 13839154 -14065899 + (CCA)n Simple_repeat Simple_repeat 1 30 0 5 690 180 77 0 0 chr3R 13839195 13839221 -14065832 + (CGA)n Simple_repeat Simple_repeat 1 26 0 5 690 218 246 0 0 chr3R 13839223 13839292 -14065761 + (CAG)n Simple_repeat Simple_repeat 3 71 0 5 690 252 247 0 0 chr3R 13839432 13839505 -14065548 + A-rich Low_complexity Low_complexity 1 73 0 5 690 204 216 0 0 chr3R 13839727 13839778 -14065275 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 690 21 0 0 0 chr3R 13840964 13840985 -14064068 + AT_rich Low_complexity Low_complexity 1 21 0 5 690 225 94 0 0 chr3R 13841605 13841637 -14063416 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 690 201 74 0 0 chr3R 13841955 13841982 -14063071 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 690 26 30 0 0 chr3R 13842838 13842871 -14062182 + AT_rich Low_complexity Low_complexity 1 33 0 5 690 374 57 0 19 chr3R 13843477 13843531 -14061522 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 690 23 78 0 0 chr3R 13843686 13843737 -14061316 + AT_rich Low_complexity Low_complexity 1 51 0 5 690 27 0 0 0 chr3R 13843937 13843964 -14061089 + AT_rich Low_complexity Low_complexity 1 27 0 5 690 29 84 0 0 chr3R 13844018 13844089 -14060964 + AT_rich Low_complexity Low_complexity 1 71 0 5 690 214 171 0 0 chr3R 13844237 13844278 -14060775 + (CAGAT)n Simple_repeat Simple_repeat 4 44 0 5 690 24 32 0 0 chr3R 13845672 13845703 -14059350 + AT_rich Low_complexity Low_complexity 1 31 0 5 690 28 29 0 0 chr3R 13845747 13845782 -14059271 + AT_rich Low_complexity Low_complexity 1 35 0 5 690 32 0 0 0 chr3R 13846939 13846971 -14058082 + AT_rich Low_complexity Low_complexity 1 32 0 5 690 228 100 0 0 chr3R 13852916 13852956 -14052097 + (TCC)n Simple_repeat Simple_repeat 3 42 0 5 690 21 0 0 0 chr3R 13853315 13853336 -14051717 + AT_rich Low_complexity Low_complexity 1 21 0 5 690 28 0 0 0 chr3R 13855552 13855580 -14049473 + AT_rich Low_complexity Low_complexity 1 28 0 5 690 25 31 0 0 chr3R 13856304 13856336 -14048717 + AT_rich Low_complexity Low_complexity 1 32 0 5 690 180 0 0 0 chr3R 13856897 13856917 -14048136 + (TATG)n Simple_repeat Simple_repeat 1 20 0 5 690 4790 4 0 0 chr3R 13858554 13859072 -14045981 + NOMAD_LTR LTR Gypsy 1 518 0 5 690 61411 1 1 2 chr3R 13859072 13865652 -14039401 + NOMAD_I LTR Gypsy 1 6572 0 5 690 4790 4 0 0 chr3R 13865652 13866170 -14038883 + NOMAD_LTR LTR Gypsy 1 518 0 5 690 195 186 0 0 chr3R 13868617 13868660 -14036393 + (ACTG)n Simple_repeat Simple_repeat 3 45 0 5 690 288 0 0 0 chr3R 13868727 13868759 -14036294 + (CAGC)n Simple_repeat Simple_repeat 1 32 0 5 690 183 42 0 0 chr3R 13869454 13869478 -14035575 + (A)n Simple_repeat Simple_repeat 1 24 0 5 690 30 0 0 0 chr3R 13870069 13870099 -14034954 + AT_rich Low_complexity Low_complexity 1 30 0 5 690 213 247 10 61 chr3R 13875144 13875243 -14029810 + CT-rich Low_complexity Low_complexity 1 94 0 5 690 237 33 0 0 chr3R 13876654 13876684 -14028369 + (TCCA)n Simple_repeat Simple_repeat 2 31 0 5 690 189 74 0 0 chr3R 13877516 13877543 -14027510 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 690 22 0 0 0 chr3R 13877902 13877924 -14027129 + AT_rich Low_complexity Low_complexity 1 22 0 5 690 22 35 0 0 chr3R 13878533 13878562 -14026491 + AT_rich Low_complexity Low_complexity 1 29 0 5 690 27 0 0 0 chr3R 13879369 13879396 -14025657 + AT_rich Low_complexity Low_complexity 1 27 0 5 690 25 0 0 0 chr3R 13883120 13883145 -14021908 + AT_rich Low_complexity Low_complexity 1 25 0 5 690 216 67 0 0 chr3R 13883980 13884010 -14021043 + (CAT)n Simple_repeat Simple_repeat 2 31 0 5 690 222 37 0 0 chr3R 13885622 13885649 -14019404 + (T)n Simple_repeat Simple_repeat 1 27 0 5 690 204 122 19 75 chr3R 13885802 13885855 -14019198 + T-rich Low_complexity Low_complexity 1 50 0 5 690 13775 1 3 0 chr3R 13887370 13888867 -14016186 - FW_DM LINE Jockey 0 4692 3192 5 690 265 24 23 23 chr3R 13890362 13890405 -14014648 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 690 198 0 0 0 chr3R 13891877 13891899 -14013154 + (ATG)n Simple_repeat Simple_repeat 1 22 0 5 690 207 0 0 0 chr3R 13892463 13892486 -14012567 + (TCC)n Simple_repeat Simple_repeat 3 25 0 5 691 22 0 0 0 chr3R 13894375 13894397 -14010656 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 23 0 0 0 chr3R 13894701 13894724 -14010329 + AT_rich Low_complexity Low_complexity 1 23 0 5 691 43 0 0 0 chr3R 13895378 13895421 -14009632 + AT_rich Low_complexity Low_complexity 1 43 0 5 691 201 185 56 0 chr3R 13898511 13898565 -14006488 + A-rich Low_complexity Low_complexity 4 60 0 5 691 32 75 0 0 chr3R 13899740 13899807 -14005246 + AT_rich Low_complexity Low_complexity 1 67 0 5 691 26 50 0 0 chr3R 13899851 13899891 -14005162 + AT_rich Low_complexity Low_complexity 1 40 0 5 691 185 159 23 0 chr3R 13904418 13904462 -14000591 + (CTG)n Simple_repeat Simple_repeat 3 47 0 5 691 30 0 0 0 chr3R 13904575 13904605 -14000448 + AT_rich Low_complexity Low_complexity 1 30 0 5 691 183 80 0 0 chr3R 13905203 13905228 -13999825 + (CATATA)n Simple_repeat Simple_repeat 4 28 0 5 691 26 93 0 0 chr3R 13905877 13905952 -13999101 + AT_rich Low_complexity Low_complexity 1 75 0 5 691 192 77 0 0 chr3R 13906245 13906271 -13998782 + (CATTC)n Simple_repeat Simple_repeat 4 29 0 5 691 22 88 0 0 chr3R 13908231 13908288 -13996765 + AT_rich Low_complexity Low_complexity 1 57 0 5 691 764 106 310 0 chr3R 13910141 13910317 -13994736 - DNAREP1_DM LINE Penelope -29 565 335 5 691 24 67 0 0 chr3R 13910459 13910504 -13994549 + AT_rich Low_complexity Low_complexity 1 45 0 5 691 25 31 0 0 chr3R 13912243 13912275 -13992778 + AT_rich Low_complexity Low_complexity 1 32 0 5 691 204 163 0 0 chr3R 13914147 13914190 -13990863 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 5 691 183 42 0 0 chr3R 13914998 13915022 -13990031 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 691 186 43 0 0 chr3R 13915371 13915394 -13989659 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 691 25 0 0 0 chr3R 13917592 13917617 -13987436 + AT_rich Low_complexity Low_complexity 1 25 0 5 691 21 57 0 0 chr3R 13917900 13917935 -13987118 + AT_rich Low_complexity Low_complexity 1 35 0 5 691 249 57 0 0 chr3R 13919515 13919550 -13985503 + (TTA)n Simple_repeat Simple_repeat 2 36 0 5 691 234 0 0 0 chr3R 13920592 13920618 -13984435 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 691 22 0 0 0 chr3R 13921088 13921110 -13983943 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 23 33 0 0 chr3R 13921402 13921432 -13983621 + AT_rich Low_complexity Low_complexity 1 30 0 5 691 366 129 0 0 chr3R 13922267 13922329 -13982724 + (CAG)n Simple_repeat Simple_repeat 1 62 0 5 691 252 122 0 0 chr3R 13925567 13925608 -13979445 + (CTG)n Simple_repeat Simple_repeat 1 41 0 5 691 180 152 0 0 chr3R 13926292 13926325 -13978728 + T-rich Low_complexity Low_complexity 1 33 0 5 691 233 29 0 29 chr3R 13927135 13927170 -13977883 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 691 28 29 0 0 chr3R 13927539 13927574 -13977479 + AT_rich Low_complexity Low_complexity 1 35 0 5 691 200 31 0 59 chr3R 13927910 13927944 -13977109 + (TTTTA)n Simple_repeat Simple_repeat 4 35 0 5 691 40 0 0 0 chr3R 13929658 13929698 -13975355 + AT_rich Low_complexity Low_complexity 1 40 0 5 691 189 94 0 0 chr3R 13930115 13930147 -13974906 + (T)n Simple_repeat Simple_repeat 1 32 0 5 691 21 0 0 0 chr3R 13930644 13930665 -13974388 + AT_rich Low_complexity Low_complexity 1 21 0 5 691 36 53 0 0 chr3R 13930754 13930811 -13974242 + AT_rich Low_complexity Low_complexity 1 57 0 5 691 36 23 0 0 chr3R 13930860 13930903 -13974150 + AT_rich Low_complexity Low_complexity 1 43 0 5 691 27 0 0 0 chr3R 13930966 13930993 -13974060 + AT_rich Low_complexity Low_complexity 1 27 0 5 691 24 0 0 0 chr3R 13931055 13931079 -13973974 + AT_rich Low_complexity Low_complexity 1 24 0 5 691 27 0 0 0 chr3R 13932811 13932838 -13972215 + AT_rich Low_complexity Low_complexity 1 27 0 5 691 234 91 0 0 chr3R 13933170 13933203 -13971850 + (CTG)n Simple_repeat Simple_repeat 3 35 0 5 691 198 71 0 0 chr3R 13933281 13933309 -13971744 + (CAA)n Simple_repeat Simple_repeat 2 29 0 5 691 198 0 0 0 chr3R 13933801 13933823 -13971230 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 5 691 30 0 0 0 chr3R 13934451 13934481 -13970572 + AT_rich Low_complexity Low_complexity 1 30 0 5 691 201 39 0 0 chr3R 13935339 13935365 -13969688 + (T)n Simple_repeat Simple_repeat 1 26 0 5 691 195 100 0 0 chr3R 13936329 13936359 -13968694 + (T)n Simple_repeat Simple_repeat 1 30 0 5 691 22 0 0 0 chr3R 13937300 13937322 -13967731 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 255 190 0 0 chr3R 13937507 13937565 -13967488 + CT-rich Low_complexity Low_complexity 2 59 0 5 691 28 0 0 0 chr3R 13938781 13938809 -13966244 + AT_rich Low_complexity Low_complexity 1 28 0 5 691 23 0 0 0 chr3R 13942520 13942543 -13962510 + AT_rich Low_complexity Low_complexity 1 23 0 5 691 204 40 0 0 chr3R 13943971 13943996 -13961057 + (CAG)n Simple_repeat Simple_repeat 3 27 0 5 691 285 200 13 0 chr3R 13944412 13944533 -13960520 + (TCTCTG)n Simple_repeat Simple_repeat 1 122 0 5 691 234 0 0 0 chr3R 13945062 13945088 -13959965 + (A)n Simple_repeat Simple_repeat 1 26 0 5 691 201 74 0 0 chr3R 13945346 13945373 -13959680 + (CAGT)n Simple_repeat Simple_repeat 1 27 0 5 691 28 61 0 0 chr3R 13946511 13946560 -13958493 + AT_rich Low_complexity Low_complexity 1 49 0 5 691 22 70 0 0 chr3R 13948595 13948638 -13956415 + AT_rich Low_complexity Low_complexity 1 43 0 5 691 27 81 0 0 chr3R 13948653 13948715 -13956338 + AT_rich Low_complexity Low_complexity 1 62 0 5 691 23 68 0 0 chr3R 13950110 13950154 -13954899 + AT_rich Low_complexity Low_complexity 1 44 0 5 691 207 0 0 0 chr3R 13950472 13950495 -13954558 + (TAA)n Simple_repeat Simple_repeat 2 24 0 5 691 23 0 0 0 chr3R 13951308 13951331 -13953722 + AT_rich Low_complexity Low_complexity 1 23 0 5 691 189 197 0 0 chr3R 13951793 13951854 -13953199 + A-rich Low_complexity Low_complexity 1 61 0 5 691 22 0 0 0 chr3R 13954286 13954308 -13950745 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 26 0 0 0 chr3R 13954466 13954492 -13950561 + AT_rich Low_complexity Low_complexity 1 26 0 5 691 182 37 37 0 chr3R 13954492 13954519 -13950534 + (CAA)n Simple_repeat Simple_repeat 2 29 0 5 691 333 125 0 0 chr3R 13955256 13955312 -13949741 + (T)n Simple_repeat Simple_repeat 1 56 0 5 691 379 48 32 0 chr3R 13956276 13956338 -13948715 + (CAA)n Simple_repeat Simple_repeat 3 66 0 5 691 309 196 19 10 chr3R 13956412 13956515 -13948538 + ROO_I LTR Pao 641 744 -7512 5 691 227 178 0 0 chr3R 13956520 13956565 -13948488 + (CAA)n Simple_repeat Simple_repeat 1 45 0 5 691 240 111 0 0 chr3R 13956574 13956610 -13948443 + (CCA)n Simple_repeat Simple_repeat 3 38 0 5 691 576 163 0 0 chr3R 13956618 13956747 -13948306 + (CAA)n Simple_repeat Simple_repeat 3 131 0 5 691 311 132 15 0 chr3R 13956832 13956900 -13948153 + (CAG)n Simple_repeat Simple_repeat 3 71 0 5 691 449 62 0 15 chr3R 13957044 13957110 -13947943 + (CAG)n Simple_repeat Simple_repeat 3 67 0 5 691 264 137 0 0 chr3R 13957360 13957411 -13947642 + (CAG)n Simple_repeat Simple_repeat 1 51 0 5 691 355 175 0 104 chr3R 13958029 13958144 -13946909 + ROO_I LTR Pao 641 743 -7513 5 691 22 0 0 0 chr3R 13958834 13958856 -13946197 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 22 0 0 0 chr3R 13958880 13958902 -13946151 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 31 26 0 0 chr3R 13959454 13959492 -13945561 + AT_rich Low_complexity Low_complexity 1 38 0 5 691 27 0 0 0 chr3R 13960379 13960406 -13944647 + AT_rich Low_complexity Low_complexity 1 27 0 5 691 353 75 19 0 chr3R 13960638 13960691 -13944362 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 691 189 0 0 0 chr3R 13961605 13961626 -13943427 + (CGAAA)n Simple_repeat Simple_repeat 2 22 0 5 691 195 100 0 0 chr3R 13962575 13962605 -13942448 + (CAG)n Simple_repeat Simple_repeat 2 31 0 5 691 228 100 0 0 chr3R 13964635 13964665 -13940388 - DNAREP1_DM LINE Penelope -536 58 29 5 691 35 41 0 0 chr3R 13964713 13964762 -13940291 + AT_rich Low_complexity Low_complexity 1 49 0 5 691 204 213 0 0 chr3R 13966641 13966702 -13938351 + (CAG)n Simple_repeat Simple_repeat 2 62 0 5 691 358 134 29 29 chr3R 13966883 13966952 -13938101 + DNAREP1_DM LINE Penelope 378 446 -148 5 691 450 234 0 0 chr3R 13966952 13967127 -13937926 + (CAGA)n Simple_repeat Simple_repeat 4 178 0 5 691 390 244 0 0 chr3R 13967128 13967214 -13937839 + (CGGA)n Simple_repeat Simple_repeat 4 89 0 5 691 348 83 0 0 chr3R 13968714 13968762 -13936291 + (TTGG)n Simple_repeat Simple_repeat 3 50 0 5 691 261 191 0 8 chr3R 13969662 13969736 -13935317 - ROO_I LTR Pao -7542 714 644 5 691 303 242 21 21 chr3R 13971452 13971549 -13933504 + (CAA)n Simple_repeat Simple_repeat 1 97 0 5 691 189 0 0 0 chr3R 13972817 13972838 -13932215 + (TA)n Simple_repeat Simple_repeat 2 22 0 5 691 216 97 0 0 chr3R 13974715 13974746 -13930307 + (TTA)n Simple_repeat Simple_repeat 2 32 0 5 691 631 145 410 5 chr3R 13975278 13975451 -13929602 + DMRP1 Unknown Unknown 98 340 -6 5 691 29 0 0 0 chr3R 13976168 13976197 -13928856 + AT_rich Low_complexity Low_complexity 1 29 0 5 691 24 53 0 0 chr3R 13980609 13980647 -13924406 + AT_rich Low_complexity Low_complexity 1 38 0 5 691 26 30 0 0 chr3R 13982331 13982364 -13922689 + AT_rich Low_complexity Low_complexity 1 33 0 5 691 198 103 0 0 chr3R 13982730 13982759 -13922294 + (CATA)n Simple_repeat Simple_repeat 3 31 0 5 691 25 0 0 0 chr3R 13984371 13984396 -13920657 + AT_rich Low_complexity Low_complexity 1 25 0 5 691 211 182 0 0 chr3R 13988012 13988045 -13917008 + (TTG)n Simple_repeat Simple_repeat 3 35 0 5 691 22 0 0 0 chr3R 13990297 13990319 -13914734 + AT_rich Low_complexity Low_complexity 1 22 0 5 691 23 0 0 0 chr3R 13992911 13992934 -13912119 + AT_rich Low_complexity Low_complexity 1 23 0 5 691 21 71 0 0 chr3R 13993054 13993096 -13911957 + AT_rich Low_complexity Low_complexity 1 42 0 5 691 26 0 0 0 chr3R 13993130 13993156 -13911897 + AT_rich Low_complexity Low_complexity 1 26 0 5 691 212 133 0 43 chr3R 13993758 13993805 -13911248 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 691 234 128 0 0 chr3R 13994030 13994069 -13910984 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 691 192 135 0 0 chr3R 13995073 13995110 -13909943 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 691 21 36 0 0 chr3R 13995322 13995350 -13909703 + AT_rich Low_complexity Low_complexity 1 28 0 5 691 449 341 0 6 chr3R 13995470 13995650 -13909403 + (CAG)n Simple_repeat Simple_repeat 1 179 0 5 691 226 324 9 29 chr3R 13995670 13995775 -13909278 + ROO_I LTR Pao 633 735 -7521 5 691 39 50 0 0 chr3R 13996299 13996359 -13908694 + AT_rich Low_complexity Low_complexity 1 60 0 5 691 348 138 0 0 chr3R 13999057 13999122 -13905931 + (CAG)n Simple_repeat Simple_repeat 1 65 0 5 691 206 214 0 23 chr3R 14000392 14000435 -13904618 + (CCG)n Simple_repeat Simple_repeat 2 43 0 5 691 25 0 0 0 chr3R 14000933 14000958 -13904095 + AT_rich Low_complexity Low_complexity 1 25 0 5 691 27 0 0 0 chr3R 14001002 14001029 -13904024 + AT_rich Low_complexity Low_complexity 1 27 0 5 691 23 92 0 0 chr3R 14002927 14002992 -13902061 + AT_rich Low_complexity Low_complexity 1 65 0 5 691 25 31 0 0 chr3R 14004669 14004701 -13900352 + AT_rich Low_complexity Low_complexity 1 32 0 5 691 212 0 36 0 chr3R 14005140 14005168 -13899885 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 691 21 0 0 0 chr3R 14005728 14005749 -13899304 + AT_rich Low_complexity Low_complexity 1 21 0 5 691 25 0 0 0 chr3R 14006838 14006863 -13898190 + AT_rich Low_complexity Low_complexity 1 25 0 5 691 207 69 0 0 chr3R 14009076 14009105 -13895948 + (CTG)n Simple_repeat Simple_repeat 3 31 0 5 691 1168 0 0 0 chr3R 14009218 14009348 -13895705 - ARS406_DM Unknown Unknown -38 315 186 5 691 24 53 0 0 chr3R 14011308 14011346 -13893707 + AT_rich Low_complexity Low_complexity 1 38 0 5 691 30 45 0 0 chr3R 14014671 14014715 -13890338 + AT_rich Low_complexity Low_complexity 1 44 0 5 691 271 60 20 20 chr3R 14018753 14018804 -13886249 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 691 180 0 0 0 chr3R 14018919 14018939 -13886114 + (TTGG)n Simple_repeat Simple_repeat 2 21 0 5 691 207 167 42 0 chr3R 14018991 14019039 -13886014 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 691 207 69 0 0 chr3R 14020859 14020888 -13884165 + (CTG)n Simple_repeat Simple_repeat 1 29 0 5 691 222 176 0 0 chr3R 14022274 14022325 -13882728 + (TTG)n Simple_repeat Simple_repeat 1 51 0 5 691 815 175 123 5 chr3R 14022421 14022633 -13882420 - HMSBEAGLE_I LTR Gypsy -5802 727 491 5 691 21 0 0 0 chr3R 14022633 14022654 -13882399 + AT_rich Low_complexity Low_complexity 1 21 0 5 691 226 231 15 15 chr3R 14022844 14022910 -13882143 + GA-rich Low_complexity Low_complexity 2 67 0 5 691 238 266 13 0 chr3R 14024589 14024668 -13880385 + GA-rich Low_complexity Low_complexity 1 80 0 5 692 21 0 0 0 chr3R 14024755 14024776 -13880277 + AT_rich Low_complexity Low_complexity 1 21 0 5 692 207 297 14 0 chr3R 14024830 14024904 -13880149 + (TG)n Simple_repeat Simple_repeat 2 76 0 5 692 192 40 0 0 chr3R 14026648 14026673 -13878380 + (T)n Simple_repeat Simple_repeat 1 25 0 5 692 294 222 258 25 chr3R 14031269 14031389 -13873664 + DNAREP1_DM LINE Penelope 447 594 0 5 692 210 212 0 57 chr3R 14033425 14033495 -13871558 + T-rich Low_complexity Low_complexity 2 67 0 5 692 231 208 0 20 chr3R 14035142 14035191 -13869862 + CT-rich Low_complexity Low_complexity 3 50 0 5 692 35 41 0 0 chr3R 14038002 14038051 -13867002 + AT_rich Low_complexity Low_complexity 1 49 0 5 692 847 119 356 0 chr3R 14040783 14040960 -13864093 + DNAREP1_DM LINE Penelope 355 594 0 5 692 52 30 0 0 chr3R 14049262 14049328 -13855725 + AT_rich Low_complexity Low_complexity 1 66 0 5 692 25 31 0 0 chr3R 14055257 14055289 -13849764 + AT_rich Low_complexity Low_complexity 1 32 0 5 692 258 81 0 0 chr3R 14058764 14058801 -13846252 + (ATGGTG)n Simple_repeat Simple_repeat 1 37 0 5 692 228 246 0 42 chr3R 14058815 14058887 -13846166 + (TCTG)n Simple_repeat Simple_repeat 2 70 0 5 692 26 82 0 0 chr3R 14059177 14059238 -13845815 + AT_rich Low_complexity Low_complexity 1 61 0 5 692 231 36 0 0 chr3R 14061960 14061988 -13843065 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 692 213 39 0 0 chr3R 14062359 14062385 -13842668 + (CAG)n Simple_repeat Simple_repeat 1 26 0 5 692 201 139 0 0 chr3R 14062558 14062601 -13842452 + (CAG)n Simple_repeat Simple_repeat 2 44 0 5 692 210 71 0 0 chr3R 14062659 14062687 -13842366 + (CAG)n Simple_repeat Simple_repeat 1 28 0 5 692 213 39 0 0 chr3R 14064157 14064183 -13840870 + (CAG)n Simple_repeat Simple_repeat 1 26 0 5 692 25 65 0 0 chr3R 14064730 14064776 -13840277 + AT_rich Low_complexity Low_complexity 1 46 0 5 692 22 0 0 0 chr3R 14068030 14068052 -13837001 + AT_rich Low_complexity Low_complexity 1 22 0 5 692 231 278 0 0 chr3R 14069707 14069761 -13835292 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 692 231 36 0 0 chr3R 14070909 14070937 -13834116 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 692 186 43 0 0 chr3R 14071638 14071661 -13833392 + (CCCCCT)n Simple_repeat Simple_repeat 4 26 0 5 692 201 241 0 0 chr3R 14071901 14071955 -13833098 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 692 278 107 18 0 chr3R 14074092 14074148 -13830905 + (CAA)n Simple_repeat Simple_repeat 3 59 0 5 692 30 27 0 0 chr3R 14074521 14074558 -13830495 + AT_rich Low_complexity Low_complexity 1 37 0 5 692 206 169 15 0 chr3R 14075069 14075134 -13829919 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 692 284 143 18 0 chr3R 14075436 14075492 -13829561 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 692 31 0 0 0 chr3R 14075813 14075844 -13829209 + AT_rich Low_complexity Low_complexity 1 31 0 5 692 28 0 0 0 chr3R 14083364 14083392 -13821661 + AT_rich Low_complexity Low_complexity 1 28 0 5 692 1088 144 65 56 chr3R 14084907 14085121 -13819932 - DNAREP1_DM LINE Penelope 0 594 379 5 692 475 122 256 0 chr3R 14086249 14086339 -13818714 - DMRP1 Unknown Unknown -222 124 12 5 692 201 152 0 0 chr3R 14086914 14086947 -13818106 + (TATATG)n Simple_repeat Simple_repeat 1 33 0 5 692 40 0 0 0 chr3R 14087101 14087141 -13817912 + AT_rich Low_complexity Low_complexity 1 40 0 5 692 189 0 0 0 chr3R 14087797 14087818 -13817235 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 692 24 53 0 0 chr3R 14088618 14088656 -13816397 + AT_rich Low_complexity Low_complexity 1 38 0 5 692 246 62 0 0 chr3R 14089959 14089991 -13815062 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 692 26 0 0 0 chr3R 14090751 14090777 -13814276 + AT_rich Low_complexity Low_complexity 1 26 0 5 692 209 163 0 20 chr3R 14092707 14092757 -13812296 + (ATG)n Simple_repeat Simple_repeat 3 51 0 5 692 21 0 0 0 chr3R 14093108 14093129 -13811924 + AT_rich Low_complexity Low_complexity 1 21 0 5 692 312 225 0 0 chr3R 14095497 14095577 -13809476 + ROO_I LTR Pao 647 726 -7530 5 692 236 197 0 0 chr3R 14095618 14095689 -13809364 + ROO_I LTR Pao 640 710 -7546 5 692 330 246 0 0 chr3R 14095861 14095975 -13809078 + (CAA)n Simple_repeat Simple_repeat 3 116 0 5 692 21 0 0 0 chr3R 14115177 14115198 -13789855 + AT_rich Low_complexity Low_complexity 1 21 0 5 692 209 83 28 0 chr3R 14120505 14120541 -13784512 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 692 1308 96 45 0 chr3R 14121392 14121591 -13783462 + DNAREP1_DM LINE Penelope 1 208 -386 5 692 228 67 0 0 chr3R 14123016 14123046 -13782007 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 692 203 171 0 0 chr3R 14123857 14123892 -13781161 + (ATTCG)n Simple_repeat Simple_repeat 5 39 0 5 692 24 67 0 0 chr3R 14127858 14127903 -13777150 + AT_rich Low_complexity Low_complexity 1 45 0 5 692 40 0 0 0 chr3R 14128865 14128905 -13776148 + AT_rich Low_complexity Low_complexity 1 40 0 5 692 219 152 0 0 chr3R 14132205 14132251 -13772802 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 692 204 40 0 0 chr3R 14135796 14135821 -13769232 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 692 21 0 0 0 chr3R 14135825 14135846 -13769207 + AT_rich Low_complexity Low_complexity 1 21 0 5 692 220 324 7 35 chr3R 14136677 14136818 -13768235 + (CCCCAG)n Simple_repeat Simple_repeat 2 138 0 5 692 236 300 0 0 chr3R 14136756 14136816 -13768237 + (CCCGAA)n Simple_repeat Simple_repeat 4 63 0 5 692 23 78 0 0 chr3R 14136982 14137033 -13768020 + AT_rich Low_complexity Low_complexity 1 51 0 5 692 21 0 0 0 chr3R 14137060 14137081 -13767972 + AT_rich Low_complexity Low_complexity 1 21 0 5 692 21 71 0 0 chr3R 14137109 14137151 -13767902 + AT_rich Low_complexity Low_complexity 1 42 0 5 692 204 160 60 0 chr3R 14140829 14140879 -13764174 + (TTAAA)n Simple_repeat Simple_repeat 4 56 0 5 692 29 60 0 0 chr3R 14140894 14140944 -13764109 + AT_rich Low_complexity Low_complexity 1 50 0 5 692 27 29 0 0 chr3R 14141766 14141800 -13763253 + AT_rich Low_complexity Low_complexity 1 34 0 5 692 34 0 0 0 chr3R 14142444 14142478 -13762575 + AT_rich Low_complexity Low_complexity 1 34 0 5 692 21 0 0 0 chr3R 14145582 14145603 -13759450 + AT_rich Low_complexity Low_complexity 1 21 0 5 692 299 203 0 0 chr3R 14147032 14147091 -13757962 + DNAREP1_DM LINE Penelope 1 59 -535 5 692 28 29 0 0 chr3R 14150039 14150074 -13754979 + AT_rich Low_complexity Low_complexity 1 35 0 5 692 207 259 0 0 chr3R 14150953 14151007 -13754046 + GA-rich Low_complexity Low_complexity 1 54 0 5 692 28 29 0 0 chr3R 14153948 14153983 -13751070 + AT_rich Low_complexity Low_complexity 1 35 0 5 692 197 140 0 23 chr3R 14154341 14154385 -13750668 + (TAGGG)n Simple_repeat Simple_repeat 3 45 0 5 693 240 267 13 0 chr3R 14156817 14156892 -13748161 + (TG)n Simple_repeat Simple_repeat 1 76 0 5 693 13045 2 0 1 chr3R 14157560 14158996 -13746057 - M4DM DNA Transib 0 1435 1 5 693 225 146 0 0 chr3R 14161233 14161281 -13743772 + (TTG)n Simple_repeat Simple_repeat 1 48 0 5 693 47 44 0 0 chr3R 14161597 14161665 -13743388 + AT_rich Low_complexity Low_complexity 1 68 0 5 693 207 100 0 0 chr3R 14162046 14162076 -13742977 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 693 23 0 0 0 chr3R 14164149 14164172 -13740881 + AT_rich Low_complexity Low_complexity 1 23 0 5 693 207 167 0 0 chr3R 14166349 14166391 -13738662 + (TTG)n Simple_repeat Simple_repeat 1 42 0 5 693 369 100 0 0 chr3R 14172413 14172463 -13732590 + DNAREP1_DM LINE Penelope 55 104 -490 5 693 434 98 343 0 chr3R 14172451 14172553 -13732500 + DNAREP1_DM LINE Penelope 458 594 0 5 693 216 222 0 18 chr3R 14173939 14173994 -13731059 + (TTG)n Simple_repeat Simple_repeat 1 54 0 5 693 204 182 0 0 chr3R 14174140 14174184 -13730869 + (CATGC)n Simple_repeat Simple_repeat 5 48 0 5 693 33 43 0 0 chr3R 14174319 14174366 -13730687 + AT_rich Low_complexity Low_complexity 1 47 0 5 693 240 122 0 0 chr3R 14174745 14174786 -13730267 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 693 21 0 0 0 chr3R 14175176 14175197 -13729856 + AT_rich Low_complexity Low_complexity 1 21 0 5 693 207 156 0 0 chr3R 14180777 14180809 -13724244 + (CCG)n Simple_repeat Simple_repeat 1 32 0 5 693 216 67 0 0 chr3R 14180815 14180845 -13724208 + (CTG)n Simple_repeat Simple_repeat 2 31 0 5 693 207 114 0 0 chr3R 14181324 14181359 -13723694 + (TTG)n Simple_repeat Simple_repeat 3 37 0 5 693 21 0 0 0 chr3R 14182123 14182144 -13722909 + AT_rich Low_complexity Low_complexity 1 21 0 5 693 23 33 0 0 chr3R 14182166 14182196 -13722857 + AT_rich Low_complexity Low_complexity 1 30 0 5 693 192 40 0 0 chr3R 14184428 14184453 -13720600 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 693 22 35 0 0 chr3R 14185156 14185185 -13719868 + AT_rich Low_complexity Low_complexity 1 29 0 5 693 192 261 0 0 chr3R 14188318 14188410 -13716643 + (ATG)n Simple_repeat Simple_repeat 3 94 0 5 693 23 33 0 0 chr3R 14191591 14191621 -13713432 + AT_rich Low_complexity Low_complexity 1 30 0 5 693 22 0 0 0 chr3R 14191986 14192008 -13713045 + AT_rich Low_complexity Low_complexity 1 22 0 5 693 251 247 0 0 chr3R 14194424 14194497 -13710556 + (TGG)n Simple_repeat Simple_repeat 3 75 0 5 693 213 180 0 39 chr3R 14198727 14198779 -13706274 + (CATAC)n Simple_repeat Simple_repeat 2 51 0 5 693 285 89 0 0 chr3R 14200781 14200826 -13704227 + (CATTT)n Simple_repeat Simple_repeat 1 45 0 5 693 423 59 0 0 chr3R 14203514 14203565 -13701488 + DNAREP1_DM LINE Penelope 20 70 -524 5 693 1032 95 310 0 chr3R 14203561 14203749 -13701304 + DNAREP1_DM LINE Penelope 349 594 0 5 693 384 149 151 95 chr3R 14211174 14211300 -13693753 - DNAREP1_DM LINE Penelope -10 584 452 5 693 243 202 55 77 chr3R 14212345 14212436 -13692617 + DOC3_DM LINE Jockey 1852 1940 -2800 5 693 21 0 0 0 chr3R 14215942 14215963 -13689090 + AT_rich Low_complexity Low_complexity 1 21 0 5 693 279 0 0 0 chr3R 14216647 14216678 -13688375 + (AATAG)n Simple_repeat Simple_repeat 2 32 0 5 693 21 95 0 0 chr3R 14219387 14219450 -13685603 + AT_rich Low_complexity Low_complexity 1 63 0 5 693 23 68 0 0 chr3R 14225258 14225302 -13679751 + AT_rich Low_complexity Low_complexity 1 44 0 5 693 21 0 0 0 chr3R 14228535 14228556 -13676497 + AT_rich Low_complexity Low_complexity 1 21 0 5 693 252 130 0 0 chr3R 14232869 14232915 -13672138 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 693 217 155 17 17 chr3R 14233238 14233297 -13671756 + (ATGGTG)n Simple_repeat Simple_repeat 4 62 0 5 693 202 208 0 0 chr3R 14234874 14234922 -13670131 + (CAG)n Simple_repeat Simple_repeat 2 49 0 5 693 32 0 0 0 chr3R 14235175 14235207 -13669846 + AT_rich Low_complexity Low_complexity 1 32 0 5 693 202 219 0 0 chr3R 14238177 14238218 -13666835 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 693 22 35 0 0 chr3R 14238735 14238764 -13666289 + AT_rich Low_complexity Low_complexity 1 29 0 5 693 26 64 0 0 chr3R 14239897 14239944 -13665109 + AT_rich Low_complexity Low_complexity 1 47 0 5 693 261 0 0 0 chr3R 14240628 14240657 -13664396 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 693 22 0 0 0 chr3R 14240917 14240939 -13664114 + AT_rich Low_complexity Low_complexity 1 22 0 5 693 22 0 0 0 chr3R 14241139 14241161 -13663892 + AT_rich Low_complexity Low_complexity 1 22 0 5 693 207 0 0 0 chr3R 14241789 14241812 -13663241 + (CTG)n Simple_repeat Simple_repeat 1 23 0 5 693 489 133 0 0 chr3R 14242355 14242453 -13662600 + (CTG)n Simple_repeat Simple_repeat 1 98 0 5 693 186 103 0 0 chr3R 14243182 14243211 -13661842 + (GA)n Simple_repeat Simple_repeat 2 30 0 5 693 227 191 0 0 chr3R 14243249 14243296 -13661757 + GA-rich Low_complexity Low_complexity 1 47 0 5 693 204 40 0 0 chr3R 14243966 14243991 -13661062 + (T)n Simple_repeat Simple_repeat 1 25 0 5 693 22 35 0 0 chr3R 14244133 14244162 -13660891 + AT_rich Low_complexity Low_complexity 1 29 0 5 693 234 176 0 0 chr3R 14244200 14244251 -13660802 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 693 234 236 14 27 chr3R 14244428 14244502 -13660551 + T-rich Low_complexity Low_complexity 3 75 0 5 693 252 137 0 0 chr3R 14244506 14244557 -13660496 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 693 25 65 0 0 chr3R 14244689 14244735 -13660318 + AT_rich Low_complexity Low_complexity 1 46 0 5 693 345 47 0 0 chr3R 14245279 14245322 -13659731 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 693 203 175 0 0 chr3R 14245488 14245528 -13659525 + T-rich Low_complexity Low_complexity 1 40 0 5 693 217 170 0 21 chr3R 14245820 14245868 -13659185 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 693 195 69 0 0 chr3R 14246136 14246165 -13658888 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 693 213 214 35 18 chr3R 14246468 14246525 -13658528 + (CAGAT)n Simple_repeat Simple_repeat 4 61 0 5 693 184 104 0 59 chr3R 14246618 14246669 -13658384 + (TTTAG)n Simple_repeat Simple_repeat 2 49 0 5 693 237 83 0 0 chr3R 14247039 14247075 -13657978 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 693 180 0 0 0 chr3R 14247119 14247139 -13657914 + (GA)n Simple_repeat Simple_repeat 2 21 0 5 693 207 139 0 0 chr3R 14247775 14247811 -13657242 + (CTG)n Simple_repeat Simple_repeat 3 38 0 5 693 192 77 0 0 chr3R 14247848 14247874 -13657179 + (TTA)n Simple_repeat Simple_repeat 1 26 0 5 693 192 241 0 0 chr3R 14247927 14247985 -13657068 + (TTG)n Simple_repeat Simple_repeat 1 58 0 5 693 338 215 0 27 chr3R 14248127 14248237 -13656816 - ROO_I LTR Pao -7513 743 637 5 693 217 216 0 0 chr3R 14248378 14248429 -13656624 + (CTG)n Simple_repeat Simple_repeat 3 53 0 5 693 410 186 0 0 chr3R 14248442 14248539 -13656514 - ROO_I LTR Pao -7519 737 641 5 693 25 0 0 0 chr3R 14248911 14248936 -13656117 + AT_rich Low_complexity Low_complexity 1 25 0 5 693 299 141 16 0 chr3R 14249179 14249243 -13655810 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 693 23 0 0 0 chr3R 14250638 14250661 -13654392 + AT_rich Low_complexity Low_complexity 1 23 0 5 693 26 50 0 0 chr3R 14250682 14250722 -13654331 + AT_rich Low_complexity Low_complexity 1 40 0 5 693 223 186 0 0 chr3R 14251644 14251687 -13653366 + T-rich Low_complexity Low_complexity 1 43 0 5 693 28 29 0 0 chr3R 14254193 14254228 -13650825 + AT_rich Low_complexity Low_complexity 1 35 0 5 693 210 143 0 0 chr3R 14254545 14254580 -13650473 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 693 210 136 0 0 chr3R 14254589 14254633 -13650420 + (GA)n Simple_repeat Simple_repeat 2 45 0 5 693 328 128 0 25 chr3R 14254826 14254906 -13650147 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 693 23 0 0 0 chr3R 14255269 14255292 -13649761 + AT_rich Low_complexity Low_complexity 1 23 0 5 693 25 31 0 0 chr3R 14255455 14255487 -13649566 + AT_rich Low_complexity Low_complexity 1 32 0 5 693 210 174 0 0 chr3R 14257560 14257606 -13647447 + (CTG)n Simple_repeat Simple_repeat 1 46 0 5 693 210 26 0 71 chr3R 14257823 14257865 -13647188 + (CTTTA)n Simple_repeat Simple_repeat 1 39 0 5 693 216 250 0 0 chr3R 14258891 14258931 -13646122 + (CCTG)n Simple_repeat Simple_repeat 3 42 0 5 693 23 0 0 0 chr3R 14259320 14259343 -13645710 + AT_rich Low_complexity Low_complexity 1 23 0 5 693 344 275 0 29 chr3R 14260157 14260262 -13644791 - ROO_I LTR Pao -7513 743 642 5 693 183 204 0 0 chr3R 14260365 14260409 -13644644 + (CCG)n Simple_repeat Simple_repeat 3 46 0 5 693 248 154 0 19 chr3R 14260490 14260543 -13644510 + (CCG)n Simple_repeat Simple_repeat 1 52 0 5 693 189 74 0 0 chr3R 14261926 14261953 -13643100 + (TTG)n Simple_repeat Simple_repeat 3 29 0 5 693 219 69 0 0 chr3R 14262803 14262832 -13642221 + (GA)n Simple_repeat Simple_repeat 1 29 0 5 693 29 28 0 0 chr3R 14265721 14265757 -13639296 + AT_rich Low_complexity Low_complexity 1 36 0 5 693 197 33 33 0 chr3R 14267044 14267074 -13637979 + (CAGTG)n Simple_repeat Simple_repeat 2 32 0 5 693 28 0 0 0 chr3R 14267492 14267520 -13637533 + AT_rich Low_complexity Low_complexity 1 28 0 5 693 28 0 0 0 chr3R 14268128 14268156 -13636897 + AT_rich Low_complexity Low_complexity 1 28 0 5 693 387 41 0 0 chr3R 14268551 14268600 -13636453 + (CTG)n Simple_repeat Simple_repeat 2 50 0 5 693 213 132 0 0 chr3R 14268943 14268981 -13636072 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 693 22 0 0 0 chr3R 14269498 14269520 -13635533 + AT_rich Low_complexity Low_complexity 1 22 0 5 693 185 108 0 26 chr3R 14270208 14270246 -13634807 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 5 693 24 53 0 0 chr3R 14270422 14270460 -13634593 + AT_rich Low_complexity Low_complexity 1 38 0 5 693 185 209 0 15 chr3R 14270823 14270891 -13634162 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 693 237 146 0 0 chr3R 14271066 14271114 -13633939 + (T)n Simple_repeat Simple_repeat 1 48 0 5 693 246 116 0 0 chr3R 14271210 14271253 -13633800 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 693 37 23 0 0 chr3R 14272710 14272754 -13632299 + AT_rich Low_complexity Low_complexity 1 44 0 5 693 237 152 22 0 chr3R 14272818 14272864 -13632189 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 693 186 208 0 0 chr3R 14273170 14273223 -13631830 + (CAGAGA)n Simple_repeat Simple_repeat 5 57 0 5 693 30 69 0 0 chr3R 14273567 14273625 -13631428 + AT_rich Low_complexity Low_complexity 1 58 0 5 693 180 200 0 0 chr3R 14275884 14275924 -13629129 + (TATG)n Simple_repeat Simple_repeat 1 40 0 5 693 228 35 0 0 chr3R 14277820 14277849 -13627204 + (CAAAT)n Simple_repeat Simple_repeat 2 30 0 5 693 22 56 0 0 chr3R 14279697 14279733 -13625320 + AT_rich Low_complexity Low_complexity 1 36 0 5 693 267 79 0 0 chr3R 14280328 14280366 -13624687 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 693 252 175 0 0 chr3R 14282279 14282342 -13622711 + (ACTG)n Simple_repeat Simple_repeat 4 66 0 5 693 262 203 14 0 chr3R 14283248 14283322 -13621731 + ROO_I LTR Pao 653 727 -7529 5 693 27 0 0 0 chr3R 14283696 14283723 -13621330 + AT_rich Low_complexity Low_complexity 1 27 0 5 693 261 57 0 0 chr3R 14285203 14285238 -13619815 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 693 261 265 0 0 chr3R 14285483 14285551 -13619502 - ROO_I LTR Pao -7518 738 671 5 693 186 43 0 0 chr3R 14286201 14286224 -13618829 + (GCTG)n Simple_repeat Simple_repeat 1 23 0 5 694 194 116 0 23 chr3R 14287900 14287944 -13617109 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 5 694 211 220 0 0 chr3R 14288462 14288512 -13616541 + T-rich Low_complexity Low_complexity 1 50 0 5 694 23 0 0 0 chr3R 14291254 14291277 -13613776 + AT_rich Low_complexity Low_complexity 1 23 0 5 694 276 193 0 0 chr3R 14291290 14291347 -13613706 - DOC3_DM LINE Jockey -4170 570 514 5 694 234 91 0 0 chr3R 14291508 14291541 -13613512 + (CAG)n Simple_repeat Simple_repeat 3 35 0 5 694 21 36 0 0 chr3R 14292846 14292874 -13612179 + AT_rich Low_complexity Low_complexity 1 28 0 5 694 208 167 21 0 chr3R 14293362 14293410 -13611643 + A-rich Low_complexity Low_complexity 2 50 0 5 694 26 30 0 0 chr3R 14293672 14293705 -13611348 + AT_rich Low_complexity Low_complexity 1 33 0 5 694 22 56 0 0 chr3R 14294090 14294126 -13610927 + AT_rich Low_complexity Low_complexity 1 36 0 5 694 26 82 0 0 chr3R 14294874 14294935 -13610118 + AT_rich Low_complexity Low_complexity 1 61 0 5 694 249 33 0 0 chr3R 14295555 14295585 -13609468 + (ATG)n Simple_repeat Simple_repeat 3 32 0 5 694 22 56 0 0 chr3R 14296096 14296132 -13608921 + AT_rich Low_complexity Low_complexity 1 36 0 5 694 22 0 0 0 chr3R 14296323 14296345 -13608708 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 204 214 0 35 chr3R 14297585 14297643 -13607410 + A-rich Low_complexity Low_complexity 3 58 0 5 694 25 0 0 0 chr3R 14298069 14298094 -13606959 + AT_rich Low_complexity Low_complexity 1 25 0 5 694 22 0 0 0 chr3R 14298433 14298455 -13606598 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 201 200 0 20 chr3R 14298610 14298661 -13606392 + A-rich Low_complexity Low_complexity 5 54 0 5 694 29 0 0 0 chr3R 14298957 14298986 -13606067 + AT_rich Low_complexity Low_complexity 1 29 0 5 694 237 277 30 0 chr3R 14299813 14299914 -13605139 + (CAG)n Simple_repeat Simple_repeat 3 106 0 5 694 233 213 0 0 chr3R 14300133 14300180 -13604873 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 694 21 0 0 0 chr3R 14301825 14301846 -13603207 + AT_rich Low_complexity Low_complexity 1 21 0 5 694 233 167 21 0 chr3R 14301867 14301915 -13603138 + (TTATA)n Simple_repeat Simple_repeat 4 52 0 5 694 210 37 0 0 chr3R 14302391 14302418 -13602635 + (CAG)n Simple_repeat Simple_repeat 2 28 0 5 694 276 30 0 0 chr3R 14304791 14304824 -13600229 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 694 214 200 12 70 chr3R 14306202 14306288 -13598765 + T-rich Low_complexity Low_complexity 4 84 0 5 694 244 232 0 42 chr3R 14306507 14306579 -13598474 + CT-rich Low_complexity Low_complexity 1 69 0 5 694 28 48 0 0 chr3R 14309580 14309622 -13595431 + AT_rich Low_complexity Low_complexity 1 42 0 5 694 22 0 0 0 chr3R 14311143 14311165 -13593888 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 240 255 0 18 chr3R 14311416 14311472 -13593581 + (CTGGGG)n Simple_repeat Simple_repeat 3 57 0 5 694 204 125 0 0 chr3R 14311740 14311772 -13593281 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 694 32 43 0 0 chr3R 14314644 14314690 -13590363 + AT_rich Low_complexity Low_complexity 1 46 0 5 694 28 86 0 0 chr3R 14314729 14314799 -13590254 + AT_rich Low_complexity Low_complexity 1 70 0 5 694 26 74 0 0 chr3R 14315485 14315539 -13589514 + AT_rich Low_complexity Low_complexity 1 54 0 5 694 21 36 0 0 chr3R 14315553 14315581 -13589472 + AT_rich Low_complexity Low_complexity 1 28 0 5 694 29 0 0 0 chr3R 14315604 14315633 -13589420 + AT_rich Low_complexity Low_complexity 1 29 0 5 694 201 129 0 0 chr3R 14316021 14316052 -13589001 + (CATCC)n Simple_repeat Simple_repeat 5 35 0 5 694 27 47 0 45 chr3R 14316396 14316463 -13588590 + AT_rich Low_complexity Low_complexity 1 64 0 5 694 201 167 24 0 chr3R 14316642 14316684 -13588369 + (CAG)n Simple_repeat Simple_repeat 1 43 0 5 694 200 213 0 0 chr3R 14316707 14316754 -13588299 + (TTGG)n Simple_repeat Simple_repeat 3 49 0 5 694 27 29 0 0 chr3R 14320675 14320709 -13584344 + AT_rich Low_complexity Low_complexity 1 34 0 5 694 316 153 28 0 chr3R 14322873 14322945 -13582108 - ROO_I LTR Pao -7537 719 646 5 694 249 119 0 0 chr3R 14323713 14323755 -13581298 + (ACTG)n Simple_repeat Simple_repeat 2 43 0 5 694 210 274 0 52 chr3R 14323756 14323833 -13581220 + (CTGGGG)n Simple_repeat Simple_repeat 2 74 0 5 694 260 186 0 54 chr3R 14325615 14325689 -13579364 + (CTG)n Simple_repeat Simple_repeat 3 72 0 5 694 216 200 0 48 chr3R 14325891 14325954 -13579099 + (CAA)n Simple_repeat Simple_repeat 2 61 0 5 694 275 0 49 74 chr3R 14326482 14326563 -13578490 + (TA)n Simple_repeat Simple_repeat 2 80 0 5 694 34 0 0 0 chr3R 14327996 14328030 -13577023 + AT_rich Low_complexity Low_complexity 1 34 0 5 694 24 0 0 0 chr3R 14328116 14328140 -13576913 + AT_rich Low_complexity Low_complexity 1 24 0 5 694 246 143 0 0 chr3R 14328328 14328377 -13576676 + (CAA)n Simple_repeat Simple_repeat 3 51 0 5 694 220 200 0 0 chr3R 14329881 14329931 -13575122 + (CTG)n Simple_repeat Simple_repeat 3 52 0 5 694 219 103 0 0 chr3R 14330443 14330482 -13574571 + (CACTC)n Simple_repeat Simple_repeat 4 42 0 5 694 24 0 0 0 chr3R 14333202 14333226 -13571827 + AT_rich Low_complexity Low_complexity 1 24 0 5 694 24 0 0 0 chr3R 14336581 14336605 -13568448 + AT_rich Low_complexity Low_complexity 1 24 0 5 694 245 272 0 36 chr3R 14340742 14340826 -13564227 + G-rich Low_complexity Low_complexity 1 81 0 5 694 23 0 0 0 chr3R 14342891 14342914 -13562139 + AT_rich Low_complexity Low_complexity 1 23 0 5 694 208 214 0 0 chr3R 14342946 14342988 -13562065 + (GCTG)n Simple_repeat Simple_repeat 3 44 0 5 694 30 93 0 0 chr3R 14343944 14344030 -13561023 + AT_rich Low_complexity Low_complexity 1 86 0 5 694 228 67 0 0 chr3R 14344327 14344357 -13560696 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 694 195 42 0 0 chr3R 14345872 14345896 -13559157 + (GA)n Simple_repeat Simple_repeat 2 25 0 5 694 207 0 0 0 chr3R 14346190 14346213 -13558840 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 694 24 67 0 0 chr3R 14346794 14346839 -13558214 + AT_rich Low_complexity Low_complexity 1 45 0 5 694 231 36 0 0 chr3R 14348363 14348391 -13556662 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 694 34 0 0 0 chr3R 14350096 14350130 -13554923 + AT_rich Low_complexity Low_complexity 1 34 0 5 694 228 130 0 0 chr3R 14350396 14350442 -13554611 + (CAACT)n Simple_repeat Simple_repeat 1 46 0 5 694 22 94 0 0 chr3R 14351109 14351173 -13553880 + AT_rich Low_complexity Low_complexity 1 64 0 5 694 263 136 0 17 chr3R 14351684 14351744 -13553309 + (CAA)n Simple_repeat Simple_repeat 1 59 0 5 694 210 139 0 0 chr3R 14355896 14355932 -13549121 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 694 22 0 0 0 chr3R 14356574 14356596 -13548457 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 330 155 185 44 chr3R 14356983 14357118 -13547935 + DNAREP1_DM LINE Penelope 415 568 -26 5 694 183 80 0 0 chr3R 14357623 14357648 -13547405 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 694 180 77 0 0 chr3R 14365315 14365341 -13539712 + (GACTG)n Simple_repeat Simple_repeat 5 30 0 5 694 192 77 0 0 chr3R 14368158 14368184 -13536869 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 694 23 22 0 61 chr3R 14368876 14368925 -13536128 + AT_rich Low_complexity Low_complexity 1 46 0 5 694 32 0 0 0 chr3R 14370444 14370476 -13534577 + AT_rich Low_complexity Low_complexity 1 32 0 5 694 185 210 16 0 chr3R 14371394 14371456 -13533597 + (CAG)n Simple_repeat Simple_repeat 3 65 0 5 694 273 57 0 0 chr3R 14371574 14371609 -13533444 + (CAG)n Simple_repeat Simple_repeat 1 35 0 5 694 188 170 19 0 chr3R 14371842 14371895 -13533158 + CT-rich Low_complexity Low_complexity 2 55 0 5 694 22 0 0 0 chr3R 14371976 14371998 -13533055 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 252 0 0 0 chr3R 14372694 14372722 -13532331 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 694 30 77 0 0 chr3R 14373489 14373554 -13531499 + AT_rich Low_complexity Low_complexity 1 65 0 5 694 23 33 0 0 chr3R 14373932 14373962 -13531091 + AT_rich Low_complexity Low_complexity 1 30 0 5 694 330 98 0 0 chr3R 14374555 14374606 -13530447 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 694 27 49 0 0 chr3R 14375136 14375177 -13529876 + AT_rich Low_complexity Low_complexity 1 41 0 5 694 22 0 0 0 chr3R 14382079 14382101 -13522952 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 195 42 0 0 chr3R 14382541 14382565 -13522488 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 694 213 39 0 0 chr3R 14383819 14383845 -13521208 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 694 207 0 0 0 chr3R 14384755 14384778 -13520275 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 694 25 0 0 0 chr3R 14385112 14385137 -13519916 + AT_rich Low_complexity Low_complexity 1 25 0 5 694 21 57 0 0 chr3R 14385409 14385444 -13519609 + AT_rich Low_complexity Low_complexity 1 35 0 5 694 22 0 0 0 chr3R 14385590 14385612 -13519441 + AT_rich Low_complexity Low_complexity 1 22 0 5 694 21 0 0 0 chr3R 14389088 14389109 -13515944 + AT_rich Low_complexity Low_complexity 1 21 0 5 694 28 0 0 0 chr3R 14389165 14389193 -13515860 + AT_rich Low_complexity Low_complexity 1 28 0 5 694 27 0 0 0 chr3R 14389344 14389371 -13515682 + AT_rich Low_complexity Low_complexity 1 27 0 5 694 26 0 0 0 chr3R 14390017 14390043 -13515010 + AT_rich Low_complexity Low_complexity 1 26 0 5 694 189 0 0 0 chr3R 14392146 14392167 -13512886 + (A)n Simple_repeat Simple_repeat 1 21 0 5 694 200 176 0 0 chr3R 14392288 14392322 -13512731 + (TTCGG)n Simple_repeat Simple_repeat 4 37 0 5 694 201 39 0 0 chr3R 14394672 14394698 -13510355 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 694 183 42 0 0 chr3R 14396079 14396103 -13508950 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 694 22 80 0 0 chr3R 14396173 14396223 -13508830 + AT_rich Low_complexity Low_complexity 1 50 0 5 694 27 0 0 0 chr3R 14396797 14396824 -13508229 + AT_rich Low_complexity Low_complexity 1 27 0 5 694 26 30 0 0 chr3R 14398463 14398496 -13506557 + AT_rich Low_complexity Low_complexity 1 33 0 5 694 25 51 0 0 chr3R 14398551 14398590 -13506463 + AT_rich Low_complexity Low_complexity 1 39 0 5 694 205 157 37 56 chr3R 14398592 14398646 -13506407 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 5 694 28 0 0 0 chr3R 14407552 14407580 -13497473 + AT_rich Low_complexity Low_complexity 1 28 0 5 694 24 0 0 0 chr3R 14408607 14408631 -13496422 + AT_rich Low_complexity Low_complexity 1 24 0 5 694 195 42 0 0 chr3R 14410402 14410426 -13494627 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 694 204 40 0 0 chr3R 14411326 14411351 -13493702 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 694 254 73 24 0 chr3R 14414710 14414751 -13490302 + (TA)n Simple_repeat Simple_repeat 1 42 0 5 694 21 71 0 0 chr3R 14415265 14415307 -13489746 + AT_rich Low_complexity Low_complexity 1 42 0 5 694 183 156 0 0 chr3R 14417346 14417378 -13487675 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 5 695 207 146 0 0 chr3R 14421217 14421258 -13483795 + (CTG)n Simple_repeat Simple_repeat 1 41 0 5 695 203 147 0 0 chr3R 14422842 14422876 -13482177 + (CTG)n Simple_repeat Simple_repeat 2 35 0 5 695 303 173 0 0 chr3R 14423265 14423346 -13481707 + (CTG)n Simple_repeat Simple_repeat 3 83 0 5 695 22 0 0 0 chr3R 14424321 14424343 -13480710 + AT_rich Low_complexity Low_complexity 1 22 0 5 695 35 0 0 0 chr3R 14425867 14425902 -13479151 + AT_rich Low_complexity Low_complexity 1 35 0 5 695 186 71 0 0 chr3R 14426527 14426555 -13478498 + (GATTG)n Simple_repeat Simple_repeat 5 32 0 5 695 24 0 0 0 chr3R 14427016 14427040 -13478013 + AT_rich Low_complexity Low_complexity 1 24 0 5 695 236 211 19 0 chr3R 14431307 14431359 -13473694 + DNAREP1_DM LINE Penelope 35 87 -507 5 695 297 0 0 0 chr3R 14432277 14432310 -13472743 + (T)n Simple_repeat Simple_repeat 1 33 0 5 695 35765 1 0 0 chr3R 14432310 14436454 -13468599 - FW_DM LINE Jockey 0 4692 550 5 695 21 36 0 0 chr3R 14437398 14437426 -13467627 + AT_rich Low_complexity Low_complexity 1 28 0 5 695 24 0 0 0 chr3R 14439976 14440000 -13465053 + AT_rich Low_complexity Low_complexity 1 24 0 5 695 234 128 0 0 chr3R 14442472 14442511 -13462542 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 5 695 37 23 0 0 chr3R 14447725 14447769 -13457284 + AT_rich Low_complexity Low_complexity 1 44 0 5 695 21 0 0 0 chr3R 14453050 14453071 -13451982 + AT_rich Low_complexity Low_complexity 1 21 0 5 695 31 26 0 0 chr3R 14455641 14455679 -13449374 + AT_rich Low_complexity Low_complexity 1 38 0 5 695 308 263 30 10 chr3R 14457539 14457639 -13447414 + DNAREP1_DM LINE Penelope 339 440 -154 5 695 25 31 0 0 chr3R 14457954 14457986 -13447067 + AT_rich Low_complexity Low_complexity 1 32 0 5 695 25 0 0 0 chr3R 14458548 14458573 -13446480 + AT_rich Low_complexity Low_complexity 1 25 0 5 695 215 103 0 25 chr3R 14459438 14459478 -13445575 + (TTCGG)n Simple_repeat Simple_repeat 4 42 0 5 695 211 209 0 0 chr3R 14460970 14461013 -13444040 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 5 695 24 32 0 0 chr3R 14464496 14464527 -13440526 + AT_rich Low_complexity Low_complexity 1 31 0 5 695 210 37 0 0 chr3R 14465340 14465367 -13439686 + (ACCG)n Simple_repeat Simple_repeat 3 29 0 5 695 216 111 0 0 chr3R 14466578 14466614 -13438439 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 5 695 222 37 0 0 chr3R 14467078 14467105 -13437948 + (TAA)n Simple_repeat Simple_repeat 3 29 0 5 695 192 77 0 0 chr3R 14468811 14468837 -13436216 + (TATG)n Simple_repeat Simple_repeat 3 28 0 5 695 22 0 0 0 chr3R 14469921 14469943 -13435110 + AT_rich Low_complexity Low_complexity 1 22 0 5 695 24 0 0 0 chr3R 14470688 14470712 -13434341 + AT_rich Low_complexity Low_complexity 1 24 0 5 695 31 68 0 0 chr3R 14474640 14474699 -13430354 + AT_rich Low_complexity Low_complexity 1 59 0 5 695 215 294 0 0 chr3R 14480828 14480920 -13424133 + CT-rich Low_complexity Low_complexity 2 93 0 5 695 183 80 0 0 chr3R 14481637 14481662 -13423391 + (CTG)n Simple_repeat Simple_repeat 3 27 0 5 695 210 224 0 0 chr3R 14481939 14481988 -13423065 + (CTG)n Simple_repeat Simple_repeat 1 49 0 5 695 205 128 43 0 chr3R 14484108 14484155 -13420898 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 695 221 167 0 0 chr3R 14484764 14484806 -13420247 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 695 235 169 68 0 chr3R 14495239 14495298 -13409755 + ROO_I LTR Pao 663 725 -7531 5 695 23 54 0 0 chr3R 14497745 14497782 -13407271 + AT_rich Low_complexity Low_complexity 1 37 0 5 695 27 0 0 0 chr3R 14498392 14498419 -13406634 + AT_rich Low_complexity Low_complexity 1 27 0 5 695 210 150 0 0 chr3R 14500617 14500657 -13404396 + (TTTTG)n Simple_repeat Simple_repeat 4 43 0 5 695 21 36 0 0 chr3R 14503466 14503494 -13401559 + AT_rich Low_complexity Low_complexity 1 28 0 5 695 247 333 0 0 chr3R 14505377 14505467 -13399586 + GA-rich Low_complexity Low_complexity 2 91 0 5 695 22 0 0 0 chr3R 14506604 14506626 -13398427 + AT_rich Low_complexity Low_complexity 1 22 0 5 695 264 178 27 27 chr3R 14510958 14511033 -13394020 + A-rich Low_complexity Low_complexity 4 78 0 5 695 213 94 0 0 chr3R 14511239 14511271 -13393782 + (TA)n Simple_repeat Simple_repeat 1 32 0 5 695 184 122 61 0 chr3R 14511296 14511345 -13393708 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 5 695 42 20 0 0 chr3R 14517619 14517668 -13387385 + AT_rich Low_complexity Low_complexity 1 49 0 5 695 203 61 0 29 chr3R 14524947 14524981 -13380072 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 695 183 100 0 0 chr3R 14525209 14525239 -13379814 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 695 207 125 0 0 chr3R 14525688 14525728 -13379325 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 695 22 0 0 0 chr3R 14526986 14527008 -13378045 + AT_rich Low_complexity Low_complexity 1 22 0 5 695 212 153 0 92 chr3R 14528080 14528145 -13376908 + (GGGTG)n Simple_repeat Simple_repeat 3 61 0 5 695 23 0 0 0 chr3R 14531350 14531373 -13373680 + AT_rich Low_complexity Low_complexity 1 23 0 5 695 203 133 0 0 chr3R 14532236 14532266 -13372787 + (CGGAA)n Simple_repeat Simple_repeat 4 33 0 5 695 183 42 0 0 chr3R 14534907 14534931 -13370122 + (CTA)n Simple_repeat Simple_repeat 2 25 0 5 695 23 33 0 0 chr3R 14535121 14535151 -13369902 + AT_rich Low_complexity Low_complexity 1 30 0 5 695 189 0 0 0 chr3R 14535317 14535338 -13369715 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 695 221 143 0 45 chr3R 14536886 14536930 -13368123 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 5 695 249 83 0 0 chr3R 14538426 14538462 -13366591 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 695 222 313 0 0 chr3R 14540001 14540100 -13364953 + (CAG)n Simple_repeat Simple_repeat 1 99 0 5 695 267 103 0 0 chr3R 14540175 14540214 -13364839 + (CAG)n Simple_repeat Simple_repeat 1 39 0 5 695 191 146 24 0 chr3R 14541088 14541129 -13363924 + (TA)n Simple_repeat Simple_repeat 1 42 0 5 695 21 0 0 0 chr3R 14542553 14542574 -13362479 + AT_rich Low_complexity Low_complexity 1 21 0 5 695 25 31 0 0 chr3R 14542992 14543024 -13362029 + AT_rich Low_complexity Low_complexity 1 32 0 5 695 33 0 0 0 chr3R 14543183 14543216 -13361837 + AT_rich Low_complexity Low_complexity 1 33 0 5 695 182 143 20 0 chr3R 14544512 14544561 -13360492 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 695 32 75 0 0 chr3R 14546727 14546794 -13358259 + AT_rich Low_complexity Low_complexity 1 67 0 5 695 307 213 0 0 chr3R 14548410 14548471 -13356582 + PROTOP_B DNA P 137 197 -956 5 696 305 93 0 0 chr3R 14548997 14549040 -13356013 + PROTOP_B DNA P 1111 1153 0 5 696 235 341 0 0 chr3R 14551572 14551660 -13353393 + (TGG)n Simple_repeat Simple_repeat 3 90 0 5 696 21 36 0 0 chr3R 14555286 14555314 -13349739 + AT_rich Low_complexity Low_complexity 1 28 0 5 696 208 143 0 0 chr3R 14556900 14556935 -13348118 + (A)n Simple_repeat Simple_repeat 1 35 0 5 696 247 49 49 0 chr3R 14557421 14557462 -13347591 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 696 26 0 0 0 chr3R 14558316 14558342 -13346711 + AT_rich Low_complexity Low_complexity 1 26 0 5 696 21 0 0 0 chr3R 14563684 14563705 -13341348 + AT_rich Low_complexity Low_complexity 1 21 0 5 696 29 28 0 0 chr3R 14571811 14571847 -13333206 + AT_rich Low_complexity Low_complexity 1 36 0 5 696 240 35 0 0 chr3R 14587225 14587254 -13317799 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 696 28 29 0 0 chr3R 14587861 14587896 -13317157 + AT_rich Low_complexity Low_complexity 1 35 0 5 696 183 100 0 0 chr3R 14589792 14589822 -13315231 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 696 189 0 0 0 chr3R 14590090 14590111 -13314942 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 696 231 36 0 0 chr3R 14592007 14592035 -13313018 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 696 235 195 0 0 chr3R 14594263 14594304 -13310749 + (CTTCG)n Simple_repeat Simple_repeat 2 42 0 5 696 189 74 0 0 chr3R 14598912 14598939 -13306114 + (T)n Simple_repeat Simple_repeat 1 27 0 5 696 28 0 0 0 chr3R 14600685 14600713 -13304340 + AT_rich Low_complexity Low_complexity 1 28 0 5 696 225 213 37 74 chr3R 14604167 14604248 -13300805 + BS LINE Jockey 2044 2121 -3005 5 696 207 0 0 0 chr3R 14604558 14604581 -13300472 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 696 23 0 0 0 chr3R 14605039 14605062 -13299991 + AT_rich Low_complexity Low_complexity 1 23 0 5 696 264 59 0 0 chr3R 14605525 14605559 -13299494 + (ATG)n Simple_repeat Simple_repeat 2 35 0 5 696 23 33 0 0 chr3R 14609285 14609315 -13295738 + AT_rich Low_complexity Low_complexity 1 30 0 5 696 22 0 0 0 chr3R 14611176 14611198 -13293855 + AT_rich Low_complexity Low_complexity 1 22 0 5 696 183 129 0 0 chr3R 14611415 14611446 -13293607 + (GCTG)n Simple_repeat Simple_repeat 3 33 0 5 696 222 37 0 0 chr3R 14612428 14612455 -13292598 + (CTG)n Simple_repeat Simple_repeat 2 28 0 5 696 198 174 0 0 chr3R 14613896 14613942 -13291111 + (CACCAT)n Simple_repeat Simple_repeat 3 48 0 5 696 24 32 0 0 chr3R 14618347 14618378 -13286675 + AT_rich Low_complexity Low_complexity 1 31 0 5 696 191 88 0 29 chr3R 14619460 14619495 -13285558 + (AAATG)n Simple_repeat Simple_repeat 3 36 0 5 696 231 61 0 0 chr3R 14620647 14620680 -13284373 + (TAA)n Simple_repeat Simple_repeat 2 34 0 5 696 230 206 15 45 chr3R 14624555 14624621 -13280432 + PROTOP_A DNA P 145 208 -897 5 696 201 94 0 0 chr3R 14626448 14626480 -13278573 + (TTTTTA)n Simple_repeat Simple_repeat 4 35 0 5 696 22 0 0 0 chr3R 14626651 14626673 -13278380 + AT_rich Low_complexity Low_complexity 1 22 0 5 696 269 131 16 0 chr3R 14627026 14627087 -13277966 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 696 189 0 0 0 chr3R 14627480 14627501 -13277552 + (TCG)n Simple_repeat Simple_repeat 2 22 0 5 696 243 61 0 0 chr3R 14629260 14629293 -13275760 + (TTG)n Simple_repeat Simple_repeat 1 33 0 5 696 324 138 0 0 chr3R 14630173 14630238 -13274815 + (ACTG)n Simple_repeat Simple_repeat 1 65 0 5 696 29 0 0 0 chr3R 14630872 14630901 -13274152 + AT_rich Low_complexity Low_complexity 1 29 0 5 696 203 147 0 0 chr3R 14631301 14631335 -13273718 + (CGAAA)n Simple_repeat Simple_repeat 2 35 0 5 696 276 30 0 0 chr3R 14632199 14632232 -13272821 + (CTG)n Simple_repeat Simple_repeat 1 33 0 5 696 21 57 0 0 chr3R 14633212 14633247 -13271806 + AT_rich Low_complexity Low_complexity 1 35 0 5 696 23 0 0 0 chr3R 14635458 14635481 -13269572 + AT_rich Low_complexity Low_complexity 1 23 0 5 696 198 0 0 0 chr3R 14638947 14638969 -13266084 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 696 28 71 0 0 chr3R 14639109 14639165 -13265888 + AT_rich Low_complexity Low_complexity 1 56 0 5 696 312 27 0 0 chr3R 14641859 14641896 -13263157 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 696 33 43 0 0 chr3R 14642277 14642324 -13262729 + AT_rich Low_complexity Low_complexity 1 47 0 5 696 202 200 0 0 chr3R 14642766 14642811 -13262242 + (TGGG)n Simple_repeat Simple_repeat 2 46 0 5 696 35 0 0 0 chr3R 14643996 14644031 -13261022 + AT_rich Low_complexity Low_complexity 1 35 0 5 696 234 81 0 0 chr3R 14645309 14645346 -13259707 + (TCC)n Simple_repeat Simple_repeat 3 39 0 5 696 180 111 0 0 chr3R 14648582 14648609 -13256444 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 696 22 0 0 0 chr3R 14648923 14648945 -13256108 + AT_rich Low_complexity Low_complexity 1 22 0 5 696 183 80 0 0 chr3R 14651211 14651236 -13253817 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 696 186 43 0 0 chr3R 14651821 14651844 -13253209 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 696 276 225 38 0 chr3R 14652690 14652770 -13252283 + ROO_I LTR Pao 644 726 -7530 5 696 26 50 0 0 chr3R 14654337 14654377 -13250676 + AT_rich Low_complexity Low_complexity 1 40 0 5 696 27 0 0 0 chr3R 14658777 14658804 -13246249 + AT_rich Low_complexity Low_complexity 1 27 0 5 696 210 250 0 59 chr3R 14660852 14660954 -13244099 + A-rich Low_complexity Low_complexity 6 101 0 5 696 212 167 0 0 chr3R 14662945 14662987 -13242066 + T-rich Low_complexity Low_complexity 1 42 0 5 696 26 0 0 0 chr3R 14663758 14663784 -13241269 + AT_rich Low_complexity Low_complexity 1 26 0 5 696 29 47 0 0 chr3R 14667527 14667570 -13237483 + AT_rich Low_complexity Low_complexity 1 43 0 5 696 192 152 0 0 chr3R 14670528 14670561 -13234492 + (CGA)n Simple_repeat Simple_repeat 1 33 0 5 696 210 37 0 0 chr3R 14671986 14672013 -13233040 + (CAGT)n Simple_repeat Simple_repeat 3 29 0 5 696 281 68 0 22 chr3R 14675113 14675158 -13229895 + (TC)n Simple_repeat Simple_repeat 1 44 0 5 696 25 0 0 0 chr3R 14675709 14675734 -13229319 + AT_rich Low_complexity Low_complexity 1 25 0 5 696 21 0 0 0 chr3R 14677806 14677827 -13227226 + AT_rich Low_complexity Low_complexity 1 21 0 5 697 22 0 0 0 chr3R 14681141 14681163 -13223890 + AT_rich Low_complexity Low_complexity 1 22 0 5 697 25 31 0 0 chr3R 14681654 14681686 -13223367 + AT_rich Low_complexity Low_complexity 1 32 0 5 697 27 29 0 0 chr3R 14685763 14685797 -13219256 + AT_rich Low_complexity Low_complexity 1 34 0 5 697 22 56 0 0 chr3R 14688282 14688318 -13216735 + AT_rich Low_complexity Low_complexity 1 36 0 5 697 211 216 0 0 chr3R 14689872 14689923 -13215130 + A-rich Low_complexity Low_complexity 1 51 0 5 697 224 130 22 0 chr3R 14693852 14693898 -13211155 + (GCTTG)n Simple_repeat Simple_repeat 3 49 0 5 697 204 40 0 0 chr3R 14696799 14696824 -13208229 + (T)n Simple_repeat Simple_repeat 1 25 0 5 697 34 42 0 0 chr3R 14697752 14697800 -13207253 + AT_rich Low_complexity Low_complexity 1 48 0 5 697 23 68 0 0 chr3R 14697909 14697953 -13207100 + AT_rich Low_complexity Low_complexity 1 44 0 5 697 267 122 0 0 chr3R 14698340 14698389 -13206664 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 697 27 62 0 0 chr3R 14698931 14698979 -13206074 + AT_rich Low_complexity Low_complexity 1 48 0 5 697 21 0 0 0 chr3R 14699390 14699411 -13205642 + AT_rich Low_complexity Low_complexity 1 21 0 5 697 219 170 0 60 chr3R 14699830 14699880 -13205173 + T-rich Low_complexity Low_complexity 2 48 0 5 697 24 0 0 0 chr3R 14702891 14702915 -13202138 + AT_rich Low_complexity Low_complexity 1 24 0 5 697 209 108 0 26 chr3R 14703131 14703169 -13201884 + (TAAAA)n Simple_repeat Simple_repeat 3 39 0 5 697 226 191 21 0 chr3R 14705958 14706005 -13199048 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 697 25 0 0 0 chr3R 14706501 14706526 -13198527 + AT_rich Low_complexity Low_complexity 1 25 0 5 697 189 74 0 0 chr3R 14706792 14706819 -13198234 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 697 215 135 0 26 chr3R 14706999 14707037 -13198016 + CT-rich Low_complexity Low_complexity 2 38 0 5 697 30 0 0 0 chr3R 14707355 14707385 -13197668 + AT_rich Low_complexity Low_complexity 1 30 0 5 697 22 35 0 0 chr3R 14708804 14708833 -13196220 + AT_rich Low_complexity Low_complexity 1 29 0 5 697 300 143 0 0 chr3R 14709029 14709085 -13195968 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 697 23 33 0 0 chr3R 14710676 14710706 -13194347 + AT_rich Low_complexity Low_complexity 1 30 0 5 697 237 163 0 0 chr3R 14712785 14712834 -13192219 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 697 297 131 0 0 chr3R 14713342 14713403 -13191650 + (CAGT)n Simple_repeat Simple_repeat 3 63 0 5 697 21 0 0 0 chr3R 14713679 14713700 -13191353 + AT_rich Low_complexity Low_complexity 1 21 0 5 697 21 0 0 0 chr3R 14718662 14718683 -13186370 + AT_rich Low_complexity Low_complexity 1 21 0 5 697 210 37 0 0 chr3R 14719393 14719420 -13185633 + (TCC)n Simple_repeat Simple_repeat 2 28 0 5 697 23 68 0 0 chr3R 14719862 14719906 -13185147 + AT_rich Low_complexity Low_complexity 1 44 0 5 697 186 43 0 0 chr3R 14720184 14720207 -13184846 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 697 27 29 0 0 chr3R 14721088 14721122 -13183931 + AT_rich Low_complexity Low_complexity 1 34 0 5 697 186 191 0 0 chr3R 14722786 14722828 -13182225 + (TTG)n Simple_repeat Simple_repeat 1 42 0 5 697 203 175 0 0 chr3R 14729165 14729205 -13175848 + T-rich Low_complexity Low_complexity 1 40 0 5 697 183 139 0 0 chr3R 14729764 14729800 -13175253 + (CGAAT)n Simple_repeat Simple_repeat 4 39 0 5 697 25 31 0 0 chr3R 14730286 14730318 -13174735 + AT_rich Low_complexity Low_complexity 1 32 0 5 697 189 0 0 0 chr3R 14730594 14730615 -13174438 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 697 38 51 0 0 chr3R 14732099 14732158 -13172895 + AT_rich Low_complexity Low_complexity 1 59 0 5 697 246 164 0 0 chr3R 14732783 14732838 -13172215 + (CAGC)n Simple_repeat Simple_repeat 1 55 0 5 697 225 83 0 0 chr3R 14734256 14734292 -13170761 + (CAG)n Simple_repeat Simple_repeat 3 38 0 5 697 256 212 68 0 chr3R 14735138 14735256 -13169797 + (TA)n Simple_repeat Simple_repeat 1 126 0 5 697 214 269 21 31 chr3R 14735584 14735680 -13169373 + (CATATA)n Simple_repeat Simple_repeat 1 95 0 5 697 26 0 0 0 chr3R 14736047 14736073 -13168980 + AT_rich Low_complexity Low_complexity 1 26 0 5 697 32 43 0 0 chr3R 14736792 14736838 -13168215 + AT_rich Low_complexity Low_complexity 1 46 0 5 697 21 36 0 0 chr3R 14740209 14740237 -13164816 + AT_rich Low_complexity Low_complexity 1 28 0 5 697 207 100 0 0 chr3R 14741119 14741149 -13163904 + (A)n Simple_repeat Simple_repeat 1 30 0 5 697 204 40 0 0 chr3R 14743045 14743070 -13161983 + (CATA)n Simple_repeat Simple_repeat 2 26 0 5 697 2769 44 10 10 chr3R 14743160 14743547 -13161506 + S2_DM DNA Tc1 1331 1717 -18 5 697 195 188 0 0 chr3R 14745335 14745383 -13159670 + A-rich Low_complexity Low_complexity 1 48 0 5 697 227 341 0 0 chr3R 14745481 14745616 -13159437 + A-rich Low_complexity Low_complexity 1 135 0 5 697 245 240 0 0 chr3R 14746599 14746649 -13158404 + (CAG)n Simple_repeat Simple_repeat 2 51 0 5 697 203 156 0 0 chr3R 14747601 14747633 -13157420 + (CATA)n Simple_repeat Simple_repeat 4 35 0 5 697 600 93 50 40 chr3R 14747775 14747876 -13157177 + PROTOP_A DNA P 1 102 -1003 5 697 551 192 170 7 chr3R 14747871 14748018 -13157035 + PROTOP_A DNA P 862 1036 -69 5 697 270 81 0 0 chr3R 14750216 14750253 -13154800 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 697 21 0 0 0 chr3R 14750304 14750325 -13154728 + AT_rich Low_complexity Low_complexity 1 21 0 5 697 22 35 0 0 chr3R 14750606 14750635 -13154418 + AT_rich Low_complexity Low_complexity 1 29 0 5 697 214 186 0 0 chr3R 14754123 14754166 -13150887 + (TTG)n Simple_repeat Simple_repeat 2 44 0 5 697 28 29 0 0 chr3R 14754543 14754578 -13150475 + AT_rich Low_complexity Low_complexity 1 35 0 5 697 29 47 0 0 chr3R 14754655 14754698 -13150355 + AT_rich Low_complexity Low_complexity 1 43 0 5 697 186 43 0 0 chr3R 14755344 14755367 -13149686 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 697 302 159 0 14 chr3R 14755459 14755529 -13149524 + (TG)n Simple_repeat Simple_repeat 1 69 0 5 697 204 209 0 0 chr3R 14757584 14757627 -13147426 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 697 22 56 0 0 chr3R 14759214 14759250 -13145803 + AT_rich Low_complexity Low_complexity 1 36 0 5 697 227 203 16 0 chr3R 14759555 14759619 -13145434 + (CAG)n Simple_repeat Simple_repeat 1 65 0 5 697 28 86 0 0 chr3R 14759989 14760059 -13144994 + AT_rich Low_complexity Low_complexity 1 70 0 5 697 249 148 49 0 chr3R 14760181 14760242 -13144811 - ROO_I LTR Pao -7558 698 635 5 697 234 0 0 0 chr3R 14760529 14760555 -13144498 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 697 227 227 30 0 chr3R 14760711 14760777 -13144276 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 697 29 78 0 0 chr3R 14761800 14761864 -13143189 + AT_rich Low_complexity Low_complexity 1 64 0 5 697 225 119 0 0 chr3R 14761940 14761982 -13143071 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 697 206 62 31 0 chr3R 14763679 14763711 -13141342 + (TTCG)n Simple_repeat Simple_repeat 4 36 0 5 697 246 62 0 0 chr3R 14764999 14765031 -13140022 + (CTG)n Simple_repeat Simple_repeat 3 34 0 5 697 21 57 0 0 chr3R 14765447 14765482 -13139571 + AT_rich Low_complexity Low_complexity 1 35 0 5 697 21 36 0 0 chr3R 14766620 14766648 -13138405 + AT_rich Low_complexity Low_complexity 1 28 0 5 697 180 0 0 0 chr3R 14769917 14769937 -13135116 + (CTG)n Simple_repeat Simple_repeat 3 22 0 5 697 21 0 0 0 chr3R 14770342 14770363 -13134690 + AT_rich Low_complexity Low_complexity 1 21 0 5 697 22 56 0 0 chr3R 14771515 14771551 -13133502 + AT_rich Low_complexity Low_complexity 1 36 0 5 697 247 115 0 147 chr3R 14773194 14773296 -13131757 + ROO_I LTR Pao 643 729 -7527 5 697 27 0 0 0 chr3R 14774376 14774403 -13130650 + AT_rich Low_complexity Low_complexity 1 27 0 5 697 237 119 0 0 chr3R 14780209 14780251 -13124802 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 697 25 0 0 0 chr3R 14780771 14780796 -13124257 + AT_rich Low_complexity Low_complexity 1 25 0 5 697 189 0 0 0 chr3R 14781038 14781059 -13123994 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 697 22 0 0 0 chr3R 14781929 14781951 -13123102 + AT_rich Low_complexity Low_complexity 1 22 0 5 697 26 0 0 0 chr3R 14782507 14782533 -13122520 + AT_rich Low_complexity Low_complexity 1 26 0 5 697 200 200 0 0 chr3R 14784425 14784465 -13120588 + GA-rich Low_complexity Low_complexity 3 42 0 5 697 240 59 0 0 chr3R 14784468 14784502 -13120551 + (GAGTG)n Simple_repeat Simple_repeat 3 36 0 5 697 246 81 0 0 chr3R 14784761 14784798 -13120255 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 697 24 0 0 0 chr3R 14785581 14785605 -13119448 + AT_rich Low_complexity Low_complexity 1 24 0 5 697 288 0 0 0 chr3R 14787740 14787772 -13117281 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 697 186 71 0 0 chr3R 14787912 14787940 -13117113 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 697 26 74 0 0 chr3R 14789361 14789415 -13115638 + AT_rich Low_complexity Low_complexity 1 54 0 5 697 276 53 0 0 chr3R 14790052 14790090 -13114963 + (CAT)n Simple_repeat Simple_repeat 3 40 0 5 697 207 0 0 0 chr3R 14793911 14793934 -13111119 + (TAGA)n Simple_repeat Simple_repeat 3 25 0 5 697 201 189 38 0 chr3R 14794329 14794382 -13110671 + (CCCA)n Simple_repeat Simple_repeat 2 56 0 5 697 22 35 0 0 chr3R 14794775 14794804 -13110249 + AT_rich Low_complexity Low_complexity 1 29 0 5 697 25 51 0 0 chr3R 14797465 14797504 -13107549 + AT_rich Low_complexity Low_complexity 1 39 0 5 697 245 229 0 16 chr3R 14799510 14799572 -13105481 + CT-rich Low_complexity Low_complexity 2 62 0 5 697 26 50 0 0 chr3R 14803975 14804015 -13101038 + AT_rich Low_complexity Low_complexity 1 40 0 5 697 207 0 0 0 chr3R 14806992 14807015 -13098038 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 697 22 0 0 0 chr3R 14809475 14809497 -13095556 + AT_rich Low_complexity Low_complexity 1 22 0 5 698 241 273 0 0 chr3R 14815049 14815115 -13089938 + (CAG)n Simple_repeat Simple_repeat 3 68 0 5 698 252 59 0 0 chr3R 14815151 14815185 -13089868 + (TTCG)n Simple_repeat Simple_repeat 1 34 0 5 698 225 167 0 0 chr3R 14816686 14816728 -13088325 + GA-rich Low_complexity Low_complexity 1 42 0 5 698 252 0 0 0 chr3R 14824620 14824648 -13080405 + (ACTCG)n Simple_repeat Simple_repeat 2 29 0 5 698 183 80 0 0 chr3R 14826445 14826470 -13078583 + (TAAAA)n Simple_repeat Simple_repeat 5 29 0 5 698 201 133 0 0 chr3R 14827669 14827699 -13077354 + (ACTCG)n Simple_repeat Simple_repeat 5 34 0 5 698 195 42 0 0 chr3R 14835633 14835657 -13069396 + (TCG)n Simple_repeat Simple_repeat 2 25 0 5 698 183 80 0 0 chr3R 14835800 14835825 -13069228 + (CGA)n Simple_repeat Simple_repeat 1 25 0 5 698 28 0 0 0 chr3R 14840734 14840762 -13064291 + AT_rich Low_complexity Low_complexity 1 28 0 5 698 252 143 0 0 chr3R 14841291 14841347 -13063706 + (TC)n Simple_repeat Simple_repeat 2 57 0 5 698 210 91 0 0 chr3R 14843329 14843362 -13061691 + (CAA)n Simple_repeat Simple_repeat 3 35 0 5 698 21 36 0 0 chr3R 14849676 14849704 -13055349 + AT_rich Low_complexity Low_complexity 1 28 0 5 698 23 33 0 0 chr3R 14852942 14852972 -13052081 + AT_rich Low_complexity Low_complexity 1 30 0 5 698 23 0 0 0 chr3R 14858110 14858133 -13046920 + AT_rich Low_complexity Low_complexity 1 23 0 5 698 242 56 28 0 chr3R 14861177 14861213 -13043840 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 698 189 94 0 0 chr3R 14861409 14861441 -13043612 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 5 698 29 0 0 0 chr3R 14862450 14862479 -13042574 + AT_rich Low_complexity Low_complexity 1 29 0 5 698 335 185 0 89 chr3R 14866392 14866493 -13038560 + ROO_I LTR Pao 648 739 -7517 5 698 302 229 0 48 chr3R 14866541 14866665 -13038388 + ROO_I LTR Pao 626 743 -7513 5 698 24 32 0 0 chr3R 14877809 14877840 -13027213 + AT_rich Low_complexity Low_complexity 1 31 0 5 698 279 114 0 0 chr3R 14879546 14879590 -13025463 + (CAG)n Simple_repeat Simple_repeat 1 44 0 5 698 284 224 66 0 chr3R 14879916 14879992 -13025061 + ROO_I LTR Pao 651 731 -7525 5 698 224 200 0 0 chr3R 14881579 14881624 -13023429 + (CTG)n Simple_repeat Simple_repeat 3 47 0 5 698 237 65 0 0 chr3R 14882140 14882171 -13022882 + (CATAC)n Simple_repeat Simple_repeat 3 33 0 5 698 270 0 0 0 chr3R 14883945 14883975 -13021078 + (CTAA)n Simple_repeat Simple_repeat 1 30 0 5 698 204 40 0 0 chr3R 14885852 14885877 -13019176 + (CATA)n Simple_repeat Simple_repeat 3 27 0 5 698 200 233 0 0 chr3R 14886169 14886212 -13018841 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 698 201 171 0 0 chr3R 14887662 14887697 -13017356 + (TA)n Simple_repeat Simple_repeat 1 35 0 5 698 216 111 0 0 chr3R 14887719 14887755 -13017298 + (TGGA)n Simple_repeat Simple_repeat 2 37 0 5 698 22 35 0 0 chr3R 14888455 14888484 -13016569 + AT_rich Low_complexity Low_complexity 1 29 0 5 698 213 39 0 0 chr3R 14889357 14889383 -13015670 + (TCG)n Simple_repeat Simple_repeat 3 28 0 5 698 223 180 49 0 chr3R 14892100 14892161 -13012892 + T-rich Low_complexity Low_complexity 2 65 0 5 698 236 203 34 0 chr3R 14892312 14892371 -13012682 + ROO_I LTR Pao 667 727 -7529 5 698 198 91 0 0 chr3R 14893844 14893877 -13011176 + (A)n Simple_repeat Simple_repeat 1 33 0 5 698 186 167 0 0 chr3R 14893958 14893994 -13011059 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 698 246 143 0 0 chr3R 14894495 14894544 -13010509 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 698 180 0 0 0 chr3R 14895137 14895157 -13009896 + (CAA)n Simple_repeat Simple_repeat 1 20 0 5 698 240 35 0 0 chr3R 14896004 14896033 -13009020 + (CAGC)n Simple_repeat Simple_repeat 3 31 0 5 698 252 259 25 0 chr3R 14897736 14897817 -13007236 + (TGGA)n Simple_repeat Simple_repeat 2 84 0 5 698 25 0 0 0 chr3R 14898333 14898358 -13006695 + AT_rich Low_complexity Low_complexity 1 25 0 5 698 186 43 0 0 chr3R 14899129 14899152 -13005901 + (TCG)n Simple_repeat Simple_repeat 2 24 0 5 698 243 173 0 0 chr3R 14899465 14899517 -13005536 + (CAATT)n Simple_repeat Simple_repeat 5 56 0 5 698 234 192 58 0 chr3R 14901199 14901251 -13003802 + DOC3_DM LINE Jockey 513 567 -4173 5 698 22 0 0 0 chr3R 14906412 14906434 -12998619 + AT_rich Low_complexity Low_complexity 1 22 0 5 698 27 29 0 0 chr3R 14908208 14908242 -12996811 + AT_rich Low_complexity Low_complexity 1 34 0 5 698 24 0 0 0 chr3R 14908703 14908727 -12996326 + AT_rich Low_complexity Low_complexity 1 24 0 5 698 201 74 0 0 chr3R 14909343 14909370 -12995683 + (CAA)n Simple_repeat Simple_repeat 1 27 0 5 698 339 65 0 0 chr3R 14909543 14909589 -12995464 + (CTG)n Simple_repeat Simple_repeat 3 48 0 5 698 201 167 0 0 chr3R 14910094 14910130 -12994923 + A-rich Low_complexity Low_complexity 1 36 0 5 698 202 217 0 0 chr3R 14911329 14911375 -12993678 + (GAATG)n Simple_repeat Simple_repeat 1 46 0 5 698 203 32 0 61 chr3R 14912225 14912258 -12992795 + (CATCG)n Simple_repeat Simple_repeat 1 31 0 5 698 25 0 0 0 chr3R 14915943 14915968 -12989085 + AT_rich Low_complexity Low_complexity 1 25 0 5 698 23 33 0 0 chr3R 14916438 14916468 -12988585 + AT_rich Low_complexity Low_complexity 1 30 0 5 698 180 97 0 0 chr3R 14916948 14916979 -12988074 + (CAT)n Simple_repeat Simple_repeat 1 31 0 5 698 203 224 20 0 chr3R 14921939 14921988 -12983065 + (TAAA)n Simple_repeat Simple_repeat 4 53 0 5 698 23 0 0 0 chr3R 14924124 14924147 -12980906 + AT_rich Low_complexity Low_complexity 1 23 0 5 698 21 0 0 0 chr3R 14925157 14925178 -12979875 + AT_rich Low_complexity Low_complexity 1 21 0 5 698 348 94 0 0 chr3R 14925243 14925296 -12979757 + (CATAC)n Simple_repeat Simple_repeat 5 57 0 5 698 204 40 0 0 chr3R 14931108 14931133 -12973920 + (T)n Simple_repeat Simple_repeat 1 25 0 5 698 255 56 28 0 chr3R 14932595 14932631 -12972422 - PROTOP_B DNA P -612 541 505 5 698 207 176 0 0 chr3R 14937173 14937207 -12967846 + (CAGTC)n Simple_repeat Simple_repeat 3 36 0 5 698 208 241 0 33 chr3R 14938254 14938314 -12966739 + (CAAGC)n Simple_repeat Simple_repeat 4 61 0 5 698 466 75 45 0 chr3R 14939650 14939717 -12965336 - DNAREP1_DM LINE Penelope 0 594 525 5 698 435 235 0 10 chr3R 14939779 14939878 -12965175 - DNAREP1_DM LINE Penelope -495 99 2 5 698 225 65 0 0 chr3R 14941932 14941963 -12963090 + (CTG)n Simple_repeat Simple_repeat 2 32 0 5 698 226 277 0 15 chr3R 14942057 14942123 -12962930 + (CAG)n Simple_repeat Simple_repeat 3 67 0 5 699 287 185 0 0 chr3R 14944274 14944328 -12960725 + DNAREP1_DM LINE Penelope 1 54 -540 5 699 242 223 131 8 chr3R 14944542 14944664 -12960389 - ROO_I LTR Pao -7518 738 602 5 699 297 148 36 24 chr3R 14945516 14945599 -12959454 - ROO_I LTR Pao -7529 727 644 5 699 214 282 0 13 chr3R 14952069 14952148 -12952905 + (CAG)n Simple_repeat Simple_repeat 2 79 0 5 699 22 0 0 0 chr3R 14953848 14953870 -12951183 + AT_rich Low_complexity Low_complexity 1 22 0 5 699 261 0 0 0 chr3R 14954193 14954222 -12950831 + (CAG)n Simple_repeat Simple_repeat 1 29 0 5 699 319 149 0 0 chr3R 14954386 14954433 -12950620 - HOBO DNA hAT -72 2944 2898 5 699 267 81 0 0 chr3R 14954447 14954484 -12950569 - HOBO DNA hAT -244 2772 2736 5 699 32 67 0 0 chr3R 14954497 14954557 -12950496 + AT_rich Low_complexity Low_complexity 1 60 0 5 699 21 57 0 0 chr3R 14960701 14960736 -12944317 + AT_rich Low_complexity Low_complexity 1 35 0 5 699 15687 2 3 10 chr3R 14962846 14964586 -12940467 + BARI_DM DNA Tc1 1 1728 0 5 699 220 196 0 0 chr3R 14964838 14964884 -12940169 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 5 699 243 88 0 0 chr3R 14965143 14965177 -12939876 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 699 186 246 0 0 chr3R 14968581 14968642 -12936411 + (CGGA)n Simple_repeat Simple_repeat 1 61 0 5 699 329 127 0 18 chr3R 14971834 14971890 -12933163 - DNAREP1_DM LINE Penelope 0 594 540 5 699 304 303 22 0 chr3R 14971892 14971981 -12933072 - DNAREP1_DM LINE Penelope -136 458 368 5 699 245 192 77 0 chr3R 14972022 14972074 -12932979 - DNAREP1_DM LINE Penelope -538 56 1 5 699 180 143 0 0 chr3R 14977081 14977123 -12927930 + (TTTTTG)n Simple_repeat Simple_repeat 6 47 0 5 699 34 24 0 0 chr3R 14977732 14977773 -12927280 + AT_rich Low_complexity Low_complexity 1 41 0 5 699 21 57 0 0 chr3R 14982840 14982875 -12922178 + AT_rich Low_complexity Low_complexity 1 35 0 5 699 422 49 16 0 chr3R 14985709 14985770 -12919283 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 699 31 0 0 0 chr3R 14985821 14985852 -12919201 + AT_rich Low_complexity Low_complexity 1 31 0 5 699 22 0 0 0 chr3R 14988473 14988495 -12916558 + AT_rich Low_complexity Low_complexity 1 22 0 5 699 36 53 0 0 chr3R 14988927 14988984 -12916069 + AT_rich Low_complexity Low_complexity 1 57 0 5 699 29 47 0 0 chr3R 14989180 14989223 -12915830 + AT_rich Low_complexity Low_complexity 1 43 0 5 699 26 74 0 0 chr3R 14989335 14989389 -12915664 + AT_rich Low_complexity Low_complexity 1 54 0 5 699 23 0 0 0 chr3R 14991106 14991129 -12913924 + AT_rich Low_complexity Low_complexity 1 23 0 5 699 203 267 0 0 chr3R 14991677 14991737 -12913316 + T-rich Low_complexity Low_complexity 1 60 0 5 699 25 0 0 0 chr3R 14992593 14992618 -12912435 + AT_rich Low_complexity Low_complexity 1 25 0 5 699 210 136 0 0 chr3R 14993993 14994037 -12911016 + (CAG)n Simple_repeat Simple_repeat 1 44 0 5 699 198 71 0 0 chr3R 14995060 14995088 -12909965 + (CAG)n Simple_repeat Simple_repeat 3 30 0 5 699 254 148 0 47 chr3R 14995202 14995266 -12909787 + (CAG)n Simple_repeat Simple_repeat 1 61 0 5 699 39 22 0 0 chr3R 14996057 14996103 -12908950 + AT_rich Low_complexity Low_complexity 1 46 0 5 699 21 0 0 0 chr3R 14997236 14997257 -12907796 + AT_rich Low_complexity Low_complexity 1 21 0 5 699 23 0 0 0 chr3R 15007874 15007897 -12897156 + AT_rich Low_complexity Low_complexity 1 23 0 5 699 225 0 0 0 chr3R 15010134 15010159 -12894894 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 699 43 35 0 0 chr3R 15010602 15010659 -12894394 + AT_rich Low_complexity Low_complexity 1 57 0 5 699 192 77 0 0 chr3R 15011565 15011591 -12893462 + (TAGA)n Simple_repeat Simple_repeat 2 27 0 5 699 205 176 0 0 chr3R 15015073 15015107 -12889946 + (CACCAT)n Simple_repeat Simple_repeat 2 35 0 5 699 207 317 10 0 chr3R 15015606 15015710 -12889343 + (CACCAT)n Simple_repeat Simple_repeat 3 107 0 5 699 208 361 0 0 chr3R 15015734 15015795 -12889258 + (CGG)n Simple_repeat Simple_repeat 1 61 0 5 699 480 77 0 0 chr3R 15015947 15016012 -12889041 + (CAG)n Simple_repeat Simple_repeat 1 65 0 5 699 39043 2 0 0 chr3R 15018757 15022995 -12882058 + FW_DM LINE Jockey 455 4692 0 5 699 26 0 0 0 chr3R 15023750 15023776 -12881277 + AT_rich Low_complexity Low_complexity 1 26 0 5 699 261 111 0 0 chr3R 15023925 15023961 -12881092 - DNAREP1_DM LINE Penelope -133 461 426 5 699 195 42 0 0 chr3R 15024951 15024975 -12880078 + (CATA)n Simple_repeat Simple_repeat 4 27 0 5 699 21 57 0 0 chr3R 15025280 15025315 -12879738 + AT_rich Low_complexity Low_complexity 1 35 0 5 699 24 0 0 0 chr3R 15026455 15026479 -12878574 + AT_rich Low_complexity Low_complexity 1 24 0 5 699 23 33 0 0 chr3R 15029388 15029418 -12875635 + AT_rich Low_complexity Low_complexity 1 30 0 5 699 186 103 0 0 chr3R 15029710 15029739 -12875314 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 699 180 0 0 0 chr3R 15033652 15033672 -12871381 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 699 21 36 0 0 chr3R 15035229 15035257 -12869796 + AT_rich Low_complexity Low_complexity 1 28 0 5 699 243 0 0 0 chr3R 15036543 15036570 -12868483 + (CTG)n Simple_repeat Simple_repeat 1 27 0 5 699 195 42 0 0 chr3R 15037436 15037460 -12867593 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 699 26 50 0 0 chr3R 15038357 15038397 -12866656 + AT_rich Low_complexity Low_complexity 1 40 0 5 699 26 30 0 0 chr3R 15039148 15039181 -12865872 + AT_rich Low_complexity Low_complexity 1 33 0 5 699 22 0 0 0 chr3R 15040821 15040843 -12864210 + AT_rich Low_complexity Low_complexity 1 22 0 5 699 23 0 0 0 chr3R 15041151 15041174 -12863879 + AT_rich Low_complexity Low_complexity 1 23 0 5 699 23 0 0 0 chr3R 15041314 15041337 -12863716 + AT_rich Low_complexity Low_complexity 1 23 0 5 699 183 129 0 0 chr3R 15043515 15043546 -12861507 + (CTTTG)n Simple_repeat Simple_repeat 2 32 0 5 699 228 43 65 0 chr3R 15048515 15048561 -12856492 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 699 33 0 0 0 chr3R 15050195 15050228 -12854825 + AT_rich Low_complexity Low_complexity 1 33 0 5 699 39 50 0 0 chr3R 15052481 15052541 -12852512 + AT_rich Low_complexity Low_complexity 1 60 0 5 699 21 0 0 0 chr3R 15057647 15057668 -12847385 + AT_rich Low_complexity Low_complexity 1 21 0 5 699 22 0 0 0 chr3R 15058868 15058890 -12846163 + AT_rich Low_complexity Low_complexity 1 22 0 5 699 23 54 0 0 chr3R 15061907 15061944 -12843109 + AT_rich Low_complexity Low_complexity 1 37 0 5 699 21 57 0 0 chr3R 15062380 15062415 -12842638 + AT_rich Low_complexity Low_complexity 1 35 0 5 699 215 309 0 0 chr3R 15063015 15063096 -12841957 + (ATGGTG)n Simple_repeat Simple_repeat 6 86 0 5 699 22 0 0 0 chr3R 15065911 15065933 -12839120 + AT_rich Low_complexity Low_complexity 1 22 0 5 699 22 35 0 0 chr3R 15066234 15066263 -12838790 + AT_rich Low_complexity Low_complexity 1 29 0 5 699 213 196 0 0 chr3R 15066311 15066367 -12838686 + T-rich Low_complexity Low_complexity 1 56 0 5 699 182 105 0 26 chr3R 15067302 15067341 -12837712 + (TTTTTA)n Simple_repeat Simple_repeat 2 39 0 5 699 25 31 0 0 chr3R 15071974 15072006 -12833047 + AT_rich Low_complexity Low_complexity 1 32 0 5 700 213 273 0 0 chr3R 15075322 15075377 -12829676 + (CAG)n Simple_repeat Simple_repeat 3 57 0 5 700 228 111 0 0 chr3R 15076555 15076591 -12828462 + (CTG)n Simple_repeat Simple_repeat 3 38 0 5 700 231 209 45 0 chr3R 15076724 15076741 -12828312 + ROO_I LTR Pao 679 745 -7508 5 700 249 128 0 0 chr3R 15076741 15076788 -12828265 + Gypsy11_I LTR Gypsy 520 566 -2958 5 700 189 94 0 0 chr3R 15077028 15077060 -12827993 + (CAG)n Simple_repeat Simple_repeat 3 34 0 5 700 29 70 0 0 chr3R 15077689 15077746 -12827307 + AT_rich Low_complexity Low_complexity 1 57 0 5 700 23 33 0 0 chr3R 15082434 15082464 -12822589 + AT_rich Low_complexity Low_complexity 1 30 0 5 700 189 0 0 0 chr3R 15082667 15082688 -12822365 + (ATG)n Simple_repeat Simple_repeat 2 22 0 5 700 239 238 0 16 chr3R 15083307 15083371 -12821682 + (CAG)n Simple_repeat Simple_repeat 3 65 0 5 700 21 36 0 0 chr3R 15087114 15087142 -12817911 + AT_rich Low_complexity Low_complexity 1 28 0 5 700 322 294 8 0 chr3R 15087187 15087306 -12817747 + (CGA)n Simple_repeat Simple_repeat 1 120 0 5 700 23 0 0 0 chr3R 15089681 15089704 -12815349 + AT_rich Low_complexity Low_complexity 1 23 0 5 700 22 0 0 0 chr3R 15090214 15090236 -12814817 + AT_rich Low_complexity Low_complexity 1 22 0 5 700 210 118 0 0 chr3R 15090350 15090384 -12814669 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 700 237 211 0 0 chr3R 15092060 15092112 -12812941 + CT-rich Low_complexity Low_complexity 2 53 0 5 700 24 0 0 0 chr3R 15092855 15092879 -12812174 + AT_rich Low_complexity Low_complexity 1 24 0 5 700 273 29 0 0 chr3R 15093257 15093291 -12811762 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 700 24 0 0 0 chr3R 15096765 15096789 -12808264 + AT_rich Low_complexity Low_complexity 1 24 0 5 700 207 0 0 0 chr3R 15099465 15099488 -12805565 + (GCTG)n Simple_repeat Simple_repeat 3 25 0 5 700 22 80 0 0 chr3R 15099935 15099985 -12805068 + AT_rich Low_complexity Low_complexity 1 50 0 5 700 21 0 0 0 chr3R 15103486 15103507 -12801546 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 23 33 0 0 chr3R 15105994 15106024 -12799029 + AT_rich Low_complexity Low_complexity 1 30 0 5 700 23 0 0 0 chr3R 15108684 15108707 -12796346 + AT_rich Low_complexity Low_complexity 1 23 0 5 700 192 40 0 0 chr3R 15114606 15114631 -12790422 + (CAT)n Simple_repeat Simple_repeat 1 25 0 5 700 22 70 0 0 chr3R 15116672 15116715 -12788338 + AT_rich Low_complexity Low_complexity 1 43 0 5 700 189 0 0 0 chr3R 15117570 15117591 -12787462 + (CGAGA)n Simple_repeat Simple_repeat 1 21 0 5 700 186 133 0 0 chr3R 15119562 15119592 -12785461 + (CCGAA)n Simple_repeat Simple_repeat 2 31 0 5 700 205 186 0 0 chr3R 15120529 15120572 -12784481 + T-rich Low_complexity Low_complexity 1 43 0 5 700 246 62 0 0 chr3R 15120977 15121009 -12784044 + (CAATG)n Simple_repeat Simple_repeat 5 36 0 5 700 34 42 0 0 chr3R 15121294 15121342 -12783711 + AT_rich Low_complexity Low_complexity 1 48 0 5 700 23 0 0 0 chr3R 15121410 15121433 -12783620 + AT_rich Low_complexity Low_complexity 1 23 0 5 700 28 29 0 0 chr3R 15122986 15123021 -12782032 + AT_rich Low_complexity Low_complexity 1 35 0 5 700 27 29 0 0 chr3R 15126357 15126391 -12778662 + AT_rich Low_complexity Low_complexity 1 34 0 5 700 225 159 0 0 chr3R 15126727 15126771 -12778282 + A-rich Low_complexity Low_complexity 1 44 0 5 700 337 271 0 0 chr3R 15128361 15128468 -12776585 + T-rich Low_complexity Low_complexity 1 107 0 5 700 26 30 0 0 chr3R 15128711 15128744 -12776309 + AT_rich Low_complexity Low_complexity 1 33 0 5 700 33 25 0 0 chr3R 15129381 15129421 -12775632 + AT_rich Low_complexity Low_complexity 1 40 0 5 700 243 0 0 0 chr3R 15129497 15129524 -12775529 + (TTTG)n Simple_repeat Simple_repeat 4 30 0 5 700 201 147 0 0 chr3R 15130929 15130963 -12774090 + (CCG)n Simple_repeat Simple_repeat 3 36 0 5 700 223 258 16 0 chr3R 15133108 15133170 -12771883 + (CAGA)n Simple_repeat Simple_repeat 1 63 0 5 700 239 235 0 45 chr3R 15133935 15134024 -12771029 + A-rich Low_complexity Low_complexity 5 89 0 5 700 21 0 0 0 chr3R 15134501 15134522 -12770531 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 195 220 0 0 chr3R 15135173 15135223 -12769830 + (CTGGGG)n Simple_repeat Simple_repeat 2 51 0 5 700 225 132 0 0 chr3R 15135267 15135305 -12769748 + (CAG)n Simple_repeat Simple_repeat 2 39 0 5 700 224 310 0 22 chr3R 15136206 15136295 -12768758 + A-rich Low_complexity Low_complexity 2 88 0 5 700 201 74 0 0 chr3R 15136655 15136682 -12768371 + (CAT)n Simple_repeat Simple_repeat 3 29 0 5 700 189 171 0 0 chr3R 15137994 15138029 -12767024 + (CAAGG)n Simple_repeat Simple_repeat 4 38 0 5 700 189 159 0 0 chr3R 15139116 15139160 -12765893 + A-rich Low_complexity Low_complexity 1 44 0 5 700 200 132 0 26 chr3R 15139763 15139802 -12765251 + (CAGA)n Simple_repeat Simple_repeat 3 40 0 5 700 279 0 0 0 chr3R 15141433 15141464 -12763589 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 700 279 133 0 0 chr3R 15149433 15149478 -12755575 + (CTCA)n Simple_repeat Simple_repeat 3 47 0 5 700 22 0 0 0 chr3R 15150112 15150134 -12754919 + AT_rich Low_complexity Low_complexity 1 22 0 5 700 198 0 0 0 chr3R 15151327 15151349 -12753704 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 700 26 30 0 0 chr3R 15152538 15152571 -12752482 + AT_rich Low_complexity Low_complexity 1 33 0 5 700 35 0 0 0 chr3R 15153218 15153253 -12751800 + AT_rich Low_complexity Low_complexity 1 35 0 5 700 37 73 0 27 chr3R 15153985 15154097 -12750956 + AT_rich Low_complexity Low_complexity 1 109 0 5 700 21 0 0 0 chr3R 15156536 15156557 -12748496 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 27 49 0 0 chr3R 15157274 15157315 -12747738 + AT_rich Low_complexity Low_complexity 1 41 0 5 700 250 156 15 15 chr3R 15159345 15159410 -12745643 + (CAA)n Simple_repeat Simple_repeat 1 65 0 5 700 286 194 45 72 chr3R 15159866 15159977 -12745076 + HELENA LINE Jockey 554 661 0 5 700 180 0 0 0 chr3R 15162545 15162565 -12742488 + (CTTTA)n Simple_repeat Simple_repeat 5 24 0 5 700 23 78 0 0 chr3R 15165048 15165099 -12739954 + AT_rich Low_complexity Low_complexity 1 51 0 5 700 25 31 0 0 chr3R 15166281 15166313 -12738740 + AT_rich Low_complexity Low_complexity 1 32 0 5 700 21 0 0 0 chr3R 15166827 15166848 -12738205 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 21 71 0 0 chr3R 15168651 15168693 -12736360 + AT_rich Low_complexity Low_complexity 1 42 0 5 700 28 29 0 0 chr3R 15169483 15169518 -12735535 + AT_rich Low_complexity Low_complexity 1 35 0 5 700 24 53 0 0 chr3R 15171465 15171503 -12733550 + AT_rich Low_complexity Low_complexity 1 38 0 5 700 291 250 42 0 chr3R 15173852 15173924 -12731129 + (ATGGTG)n Simple_repeat Simple_repeat 6 80 0 5 700 21 0 0 0 chr3R 15178549 15178570 -12726483 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 189 94 0 0 chr3R 15179765 15179797 -12725256 + (A)n Simple_repeat Simple_repeat 1 32 0 5 700 21 0 0 0 chr3R 15184520 15184541 -12720512 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 24 53 0 0 chr3R 15186181 15186219 -12718834 + AT_rich Low_complexity Low_complexity 1 38 0 5 700 218 116 23 0 chr3R 15187762 15187805 -12717248 + (TAA)n Simple_repeat Simple_repeat 2 45 0 5 700 22 35 0 0 chr3R 15188111 15188140 -12716913 + AT_rich Low_complexity Low_complexity 1 29 0 5 700 26 64 0 0 chr3R 15189591 15189638 -12715415 + AT_rich Low_complexity Low_complexity 1 47 0 5 700 25 83 0 0 chr3R 15193291 15193351 -12711702 + AT_rich Low_complexity Low_complexity 1 60 0 5 700 36 23 0 0 chr3R 15195158 15195201 -12709852 + AT_rich Low_complexity Low_complexity 1 43 0 5 700 224 299 0 0 chr3R 15196801 15196868 -12708185 + (CCG)n Simple_repeat Simple_repeat 3 69 0 5 700 25 0 0 0 chr3R 15198524 15198549 -12706504 + AT_rich Low_complexity Low_complexity 1 25 0 5 700 180 228 0 0 chr3R 15198914 15198971 -12706082 + A-rich Low_complexity Low_complexity 1 57 0 5 700 25 31 0 0 chr3R 15199521 15199553 -12705500 + AT_rich Low_complexity Low_complexity 1 32 0 5 700 21 0 0 0 chr3R 15200612 15200633 -12704420 + AT_rich Low_complexity Low_complexity 1 21 0 5 700 23 0 0 0 chr3R 15202819 15202842 -12702211 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 204 111 0 0 chr3R 15204881 15204917 -12700136 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 5 701 242 167 0 16 chr3R 15208914 15208975 -12696078 + (CAAAC)n Simple_repeat Simple_repeat 5 64 0 5 701 23 0 0 0 chr3R 15211587 15211610 -12693443 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 23 68 0 0 chr3R 15212039 15212083 -12692970 + AT_rich Low_complexity Low_complexity 1 44 0 5 701 30 0 0 0 chr3R 15220898 15220928 -12684125 + AT_rich Low_complexity Low_complexity 1 30 0 5 701 30 0 0 0 chr3R 15225387 15225417 -12679636 + AT_rich Low_complexity Low_complexity 1 30 0 5 701 222 183 33 0 chr3R 15229236 15229296 -12675757 + (TAAA)n Simple_repeat Simple_repeat 2 63 0 5 701 27 0 0 0 chr3R 15229994 15230021 -12675032 + AT_rich Low_complexity Low_complexity 1 27 0 5 701 219 36 0 0 chr3R 15236984 15237012 -12668041 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 5 701 21 0 0 0 chr3R 15237899 15237920 -12667133 + AT_rich Low_complexity Low_complexity 1 21 0 5 701 22 0 0 0 chr3R 15239462 15239484 -12665569 + AT_rich Low_complexity Low_complexity 1 22 0 5 701 230 183 42 14 chr3R 15241458 15241530 -12663523 + (CAAAC)n Simple_repeat Simple_repeat 2 75 0 5 701 207 211 19 0 chr3R 15241945 15241997 -12663056 + (CACCAT)n Simple_repeat Simple_repeat 2 54 0 5 701 35 0 0 0 chr3R 15244187 15244222 -12660831 + AT_rich Low_complexity Low_complexity 1 35 0 5 701 21 0 0 0 chr3R 15244315 15244336 -12660717 + AT_rich Low_complexity Low_complexity 1 21 0 5 701 182 37 37 0 chr3R 15253216 15253243 -12651810 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 701 28 86 0 0 chr3R 15253309 15253379 -12651674 + AT_rich Low_complexity Low_complexity 1 70 0 5 701 23 0 0 0 chr3R 15255582 15255605 -12649448 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 25 0 0 0 chr3R 15255659 15255684 -12649369 + AT_rich Low_complexity Low_complexity 1 25 0 5 701 32 26 0 0 chr3R 15262417 15262456 -12642597 + AT_rich Low_complexity Low_complexity 1 39 0 5 701 23 0 0 0 chr3R 15263281 15263304 -12641749 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 39 74 0 0 chr3R 15265848 15265929 -12639124 + AT_rich Low_complexity Low_complexity 1 81 0 5 701 298 62 188 0 chr3R 15266066 15266114 -12638939 - DNAREP1_DM LINE Penelope -537 57 1 5 701 3711 7 0 0 chr3R 15267282 15267710 -12637343 + ROO_LTR LTR Pao 1 428 0 5 701 69921 1 3 2 chr3R 15267710 15275952 -12629101 + ROO_I LTR Pao 1 8256 0 5 701 3752 2 0 0 chr3R 15275952 15276380 -12628673 + ROO_LTR LTR Pao 1 428 0 5 701 216 149 0 0 chr3R 15278700 15278747 -12626306 + (ACTG)n Simple_repeat Simple_repeat 3 49 0 5 701 219 246 0 0 chr3R 15283622 15283683 -12621370 + A-rich Low_complexity Low_complexity 1 61 0 5 701 216 0 0 0 chr3R 15284843 15284867 -12620186 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 701 24 0 0 0 chr3R 15285095 15285119 -12619934 + AT_rich Low_complexity Low_complexity 1 24 0 5 701 24 0 0 0 chr3R 15285338 15285362 -12619691 + AT_rich Low_complexity Low_complexity 1 24 0 5 701 22 35 0 0 chr3R 15285574 15285603 -12619450 + AT_rich Low_complexity Low_complexity 1 29 0 5 701 21 0 0 0 chr3R 15285964 15285985 -12619068 + AT_rich Low_complexity Low_complexity 1 21 0 5 701 26 0 0 0 chr3R 15287484 15287510 -12617543 + AT_rich Low_complexity Low_complexity 1 26 0 5 701 21 0 0 0 chr3R 15291788 15291809 -12613244 + AT_rich Low_complexity Low_complexity 1 21 0 5 701 23 0 0 0 chr3R 15293714 15293737 -12611316 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 23 33 0 0 chr3R 15293776 15293806 -12611247 + AT_rich Low_complexity Low_complexity 1 30 0 5 701 279 140 0 0 chr3R 15294329 15294379 -12610674 + (TATG)n Simple_repeat Simple_repeat 2 51 0 5 701 207 0 0 0 chr3R 15294603 15294626 -12610427 + (TAAAG)n Simple_repeat Simple_repeat 4 26 0 5 701 264 59 0 0 chr3R 15295395 15295429 -12609624 + (ATG)n Simple_repeat Simple_repeat 1 34 0 5 701 23 0 0 0 chr3R 15296765 15296788 -12608265 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 22 0 0 0 chr3R 15297762 15297784 -12607269 + AT_rich Low_complexity Low_complexity 1 22 0 5 701 25 0 0 0 chr3R 15299008 15299033 -12606020 + AT_rich Low_complexity Low_complexity 1 25 0 5 701 50 42 0 0 chr3R 15299953 15300024 -12605029 + AT_rich Low_complexity Low_complexity 1 71 0 5 701 23 0 0 0 chr3R 15300044 15300067 -12604986 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 25 75 0 0 chr3R 15302307 15302360 -12602693 + AT_rich Low_complexity Low_complexity 1 53 0 5 701 27 29 0 0 chr3R 15308850 15308884 -12596169 + AT_rich Low_complexity Low_complexity 1 34 0 5 701 22 0 0 0 chr3R 15309404 15309426 -12595627 + AT_rich Low_complexity Low_complexity 1 22 0 5 701 28 29 0 0 chr3R 15314521 15314556 -12590497 + AT_rich Low_complexity Low_complexity 1 35 0 5 701 29 0 0 0 chr3R 15317439 15317468 -12587585 + AT_rich Low_complexity Low_complexity 1 29 0 5 701 216 143 53 18 chr3R 15317948 15318005 -12587048 + T-rich Low_complexity Low_complexity 2 60 0 5 701 26 74 0 0 chr3R 15319213 15319267 -12585786 + AT_rich Low_complexity Low_complexity 1 54 0 5 701 320 0 91 0 chr3R 15320157 15320212 -12584841 + (TTTTA)n Simple_repeat Simple_repeat 5 64 0 5 701 29 90 0 0 chr3R 15321815 15321893 -12583160 + AT_rich Low_complexity Low_complexity 1 78 0 5 701 228 241 0 0 chr3R 15323671 15323729 -12581324 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 701 186 118 0 0 chr3R 15324531 15324565 -12580488 + (TC)n Simple_repeat Simple_repeat 2 35 0 5 701 220 191 0 0 chr3R 15325226 15325268 -12579785 + CT-rich Low_complexity Low_complexity 2 43 0 5 701 207 163 0 44 chr3R 15325653 15325698 -12579355 + (CTCG)n Simple_repeat Simple_repeat 2 44 0 5 701 216 184 0 0 chr3R 15326507 15326556 -12578497 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 701 225 180 0 0 chr3R 15329260 15329310 -12575743 + GA-rich Low_complexity Low_complexity 2 51 0 5 701 276 111 0 0 chr3R 15330961 15331006 -12574047 + (CTG)n Simple_repeat Simple_repeat 2 46 0 5 701 24 67 0 0 chr3R 15334403 15334448 -12570605 + AT_rich Low_complexity Low_complexity 1 45 0 5 701 23 0 0 0 chr3R 15335130 15335153 -12569900 + AT_rich Low_complexity Low_complexity 1 23 0 5 701 214 179 0 0 chr3R 15335241 15335280 -12569773 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 87 240 229 0 16 chr3R 15335390 15335452 -12569601 + (TG)n Simple_repeat Simple_repeat 1 61 0 5 702 23 0 0 0 chr3R 15337764 15337787 -12567266 + AT_rich Low_complexity Low_complexity 1 23 0 5 702 213 163 23 0 chr3R 15342322 15342365 -12562688 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 702 222 105 0 0 chr3R 15350264 15350302 -12554751 + (ATTG)n Simple_repeat Simple_repeat 1 38 0 5 702 325 191 56 0 chr3R 15350375 15350464 -12554589 + ROO_I LTR Pao 643 736 -7520 5 702 227 235 34 45 chr3R 15350392 15350481 -12554572 + TART_B1 LINE telomeric 120 207 -10447 5 702 253 177 38 0 chr3R 15352702 15352781 -12552272 + ROO_I LTR Pao 651 732 -7524 5 702 204 189 19 19 chr3R 15355131 15355185 -12549868 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 702 21 36 0 0 chr3R 15355483 15355511 -12549542 + AT_rich Low_complexity Low_complexity 1 28 0 5 702 200 231 0 55 chr3R 15355953 15356008 -12549045 + GA-rich Low_complexity Low_complexity 2 53 0 5 702 22 35 0 0 chr3R 15358070 15358099 -12546954 + AT_rich Low_complexity Low_complexity 1 29 0 5 702 229 311 0 0 chr3R 15358802 15358863 -12546190 + GA-rich Low_complexity Low_complexity 2 62 0 5 702 23 0 0 0 chr3R 15360036 15360059 -12544994 + AT_rich Low_complexity Low_complexity 1 23 0 5 702 22 0 0 0 chr3R 15363871 15363893 -12541160 + AT_rich Low_complexity Low_complexity 1 22 0 5 702 33 25 0 0 chr3R 15364411 15364451 -12540602 + AT_rich Low_complexity Low_complexity 1 40 0 5 702 219 69 0 0 chr3R 15365274 15365303 -12539750 + (GCTG)n Simple_repeat Simple_repeat 1 29 0 5 702 28 48 0 0 chr3R 15370741 15370783 -12534270 + AT_rich Low_complexity Low_complexity 1 42 0 5 702 189 0 0 0 chr3R 15371126 15371147 -12533906 + (ACCTG)n Simple_repeat Simple_repeat 2 22 0 5 702 240 35 0 0 chr3R 15376339 15376368 -12528685 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 702 255 31 0 0 chr3R 15379632 15379664 -12525389 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 702 191 175 18 0 chr3R 15379780 15379837 -12525216 + (CA)n Simple_repeat Simple_repeat 2 59 0 5 702 189 0 0 0 chr3R 15379978 15379999 -12525054 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 5 702 27 29 0 0 chr3R 15381923 15381957 -12523096 + AT_rich Low_complexity Low_complexity 1 34 0 5 702 25 51 0 0 chr3R 15381967 15382006 -12523047 + AT_rich Low_complexity Low_complexity 1 39 0 5 702 21 0 0 0 chr3R 15383789 15383810 -12521243 + AT_rich Low_complexity Low_complexity 1 21 0 5 702 21 71 0 0 chr3R 15383890 15383932 -12521121 + AT_rich Low_complexity Low_complexity 1 42 0 5 702 213 39 0 0 chr3R 15385784 15385810 -12519243 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 702 27 0 0 0 chr3R 15387277 15387304 -12517749 + AT_rich Low_complexity Low_complexity 1 27 0 5 702 205 178 0 0 chr3R 15387675 15387720 -12517333 + (CAG)n Simple_repeat Simple_repeat 2 46 0 5 702 25 75 0 0 chr3R 15392202 15392255 -12512798 + AT_rich Low_complexity Low_complexity 1 53 0 5 702 28 29 0 0 chr3R 15401351 15401386 -12503667 + AT_rich Low_complexity Low_complexity 1 35 0 5 702 22 35 0 0 chr3R 15402398 15402427 -12502626 + AT_rich Low_complexity Low_complexity 1 29 0 5 702 225 108 0 0 chr3R 15405489 15405526 -12499527 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 702 180 0 0 0 chr3R 15405657 15405677 -12499376 + (CTG)n Simple_repeat Simple_repeat 1 20 0 5 702 189 180 0 0 chr3R 15407710 15407760 -12497293 + T-rich Low_complexity Low_complexity 1 50 0 5 702 22 56 0 0 chr3R 15409242 15409278 -12495775 + AT_rich Low_complexity Low_complexity 1 36 0 5 702 36 53 0 0 chr3R 15410085 15410142 -12494911 + AT_rich Low_complexity Low_complexity 1 57 0 5 702 288 281 0 37 chr3R 15411135 15411242 -12493811 + ROO_I LTR Pao 642 744 -7512 5 702 214 324 0 9 chr3R 15411283 15411389 -12493664 + (CAG)n Simple_repeat Simple_repeat 2 106 0 5 702 220 254 0 0 chr3R 15411869 15411932 -12493121 + GA-rich Low_complexity Low_complexity 1 63 0 5 702 21 57 0 0 chr3R 15414136 15414171 -12490882 + AT_rich Low_complexity Low_complexity 1 35 0 5 702 23 54 0 0 chr3R 15417155 15417192 -12487861 + AT_rich Low_complexity Low_complexity 1 37 0 5 702 22 0 0 0 chr3R 15417254 15417276 -12487777 + AT_rich Low_complexity Low_complexity 1 22 0 5 702 22 0 0 0 chr3R 15417305 15417327 -12487726 + AT_rich Low_complexity Low_complexity 1 22 0 5 702 29 28 0 0 chr3R 15418988 15419024 -12486029 + AT_rich Low_complexity Low_complexity 1 36 0 5 702 186 143 0 0 chr3R 15419629 15419664 -12485389 + (CAG)n Simple_repeat Simple_repeat 3 37 0 5 702 25 31 0 0 chr3R 15421031 15421063 -12483990 + AT_rich Low_complexity Low_complexity 1 32 0 5 702 257 163 33 44 chr3R 15422973 15423063 -12481990 + (CATATA)n Simple_repeat Simple_repeat 2 90 0 5 702 246 366 0 18 chr3R 15423515 15423679 -12481374 + G-rich Low_complexity Low_complexity 3 163 0 5 702 24 0 0 0 chr3R 15429260 15429284 -12475769 + AT_rich Low_complexity Low_complexity 1 24 0 5 702 254 167 130 0 chr3R 15432463 15432517 -12472536 + DNAREP1_DM LINE Penelope 2 62 -532 5 702 378 256 67 74 chr3R 15432556 15432691 -12472362 + DNAREP1_DM LINE Penelope 345 478 -116 5 702 198 0 0 0 chr3R 15432695 15432717 -12472336 + (TA)n Simple_repeat Simple_repeat 1 22 0 5 702 22 0 0 0 chr3R 15441478 15441500 -12463553 + AT_rich Low_complexity Low_complexity 1 22 0 5 702 200 241 0 17 chr3R 15442138 15442197 -12462856 + (TA)n Simple_repeat Simple_repeat 1 58 0 5 702 22 0 0 0 chr3R 15445212 15445234 -12459819 + AT_rich Low_complexity Low_complexity 1 22 0 5 702 204 40 0 0 chr3R 15449537 15449562 -12455491 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 702 204 40 0 0 chr3R 15451660 15451685 -12453368 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 702 21 36 0 0 chr3R 15454271 15454299 -12450754 + AT_rich Low_complexity Low_complexity 1 28 0 5 702 26 50 0 0 chr3R 15458922 15458962 -12446091 + AT_rich Low_complexity Low_complexity 1 40 0 5 702 24 77 0 0 chr3R 15460615 15460667 -12444386 + AT_rich Low_complexity Low_complexity 1 52 0 5 702 28 61 0 0 chr3R 15464483 15464532 -12440521 + AT_rich Low_complexity Low_complexity 1 49 0 5 703 21 0 0 0 chr3R 15467591 15467612 -12437441 + AT_rich Low_complexity Low_complexity 1 21 0 5 703 21 57 0 0 chr3R 15468342 15468377 -12436676 + AT_rich Low_complexity Low_complexity 1 35 0 5 703 354 45 0 0 chr3R 15469709 15469753 -12435300 + (TTTAA)n Simple_repeat Simple_repeat 2 45 0 5 703 22 80 0 0 chr3R 15470332 15470382 -12434671 + AT_rich Low_complexity Low_complexity 1 50 0 5 703 34 79 0 0 chr3R 15470452 15470528 -12434525 + AT_rich Low_complexity Low_complexity 1 76 0 5 703 689 107 29 0 chr3R 15474566 15474669 -12430384 + PROTOP_B DNA P 1047 1152 -1 5 703 34 42 0 0 chr3R 15476893 15476941 -12428112 + AT_rich Low_complexity Low_complexity 1 48 0 5 703 258 152 0 0 chr3R 15482387 15482446 -12422607 + CT-rich Low_complexity Low_complexity 1 59 0 5 703 33 0 0 0 chr3R 15485872 15485905 -12419148 + AT_rich Low_complexity Low_complexity 1 33 0 5 703 24 0 0 0 chr3R 15486108 15486132 -12418921 + AT_rich Low_complexity Low_complexity 1 24 0 5 703 23 0 0 0 chr3R 15486239 15486262 -12418791 + AT_rich Low_complexity Low_complexity 1 23 0 5 703 245 170 0 41 chr3R 15492229 15492278 -12412775 + DNAREP1_DM LINE Penelope 22 68 -526 5 703 249 152 22 0 chr3R 15492269 15492315 -12412738 + DNAREP1_DM LINE Penelope 286 332 -262 5 703 434 164 0 0 chr3R 15492344 15492417 -12412636 + DNAREP1_DM LINE Penelope 521 593 -1 5 703 22 35 0 0 chr3R 15493543 15493572 -12411481 + AT_rich Low_complexity Low_complexity 1 29 0 5 703 26 0 0 0 chr3R 15493652 15493678 -12411375 + AT_rich Low_complexity Low_complexity 1 26 0 5 703 204 111 0 0 chr3R 15494711 15494747 -12410306 + (GAA)n Simple_repeat Simple_repeat 2 37 0 5 703 35 24 0 0 chr3R 15496499 15496541 -12408512 + AT_rich Low_complexity Low_complexity 1 42 0 5 703 186 133 0 0 chr3R 15498985 15499015 -12406038 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 703 33 0 0 0 chr3R 15504832 15504865 -12400188 + AT_rich Low_complexity Low_complexity 1 33 0 5 703 330 138 0 0 chr3R 15505682 15505740 -12399313 + (CA)n Simple_repeat Simple_repeat 2 59 0 5 703 277 221 0 29 chr3R 15506609 15506679 -12398374 + (TTG)n Simple_repeat Simple_repeat 1 68 0 5 703 217 219 0 0 chr3R 15507723 15507764 -12397289 + (TGG)n Simple_repeat Simple_repeat 1 41 0 5 703 180 111 0 0 chr3R 15508188 15508215 -12396838 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 5 703 387 0 0 0 chr3R 15508299 15508342 -12396711 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 703 276 77 0 0 chr3R 15510188 15510227 -12394826 + (GTTTG)n Simple_repeat Simple_repeat 3 41 0 5 703 189 0 0 0 chr3R 15512469 15512490 -12392563 + (GCCTG)n Simple_repeat Simple_repeat 3 23 0 5 703 189 0 0 0 chr3R 15514562 15514583 -12390470 + (CAT)n Simple_repeat Simple_repeat 1 21 0 5 703 282 125 0 0 chr3R 15514659 15514707 -12390346 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 703 26 0 0 0 chr3R 15515337 15515363 -12389690 + AT_rich Low_complexity Low_complexity 1 26 0 5 703 243 79 0 0 chr3R 15517596 15517634 -12387419 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 703 195 204 0 0 chr3R 15518989 15519043 -12386010 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 703 279 114 0 0 chr3R 15519186 15519230 -12385823 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 703 228 238 12 12 chr3R 15520946 15521027 -12384026 + (CAG)n Simple_repeat Simple_repeat 2 82 0 5 703 21 57 0 0 chr3R 15521701 15521736 -12383317 + AT_rich Low_complexity Low_complexity 1 35 0 5 703 211 239 15 15 chr3R 15522648 15522716 -12382337 + GA-rich Low_complexity Low_complexity 2 69 0 5 703 180 0 0 0 chr3R 15524806 15524826 -12380227 + (T)n Simple_repeat Simple_repeat 1 20 0 5 703 211 213 0 0 chr3R 15526037 15526084 -12378969 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 703 36 23 0 0 chr3R 15526796 15526839 -12378214 + AT_rich Low_complexity Low_complexity 1 43 0 5 703 219 333 10 0 chr3R 15527848 15527947 -12377106 + (TTTG)n Simple_repeat Simple_repeat 1 100 0 5 703 245 287 0 54 chr3R 15529190 15529282 -12375771 + (TG)n Simple_repeat Simple_repeat 1 87 0 5 703 248 208 0 0 chr3R 15529619 15529667 -12375386 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 703 24 53 0 0 chr3R 15531218 15531256 -12373797 + AT_rich Low_complexity Low_complexity 1 38 0 5 703 3753 2 0 0 chr3R 15531295 15531694 -12373359 + BLOOD_LTR LTR Gypsy 1 399 0 5 703 60368 0 0 0 chr3R 15531694 15538307 -12366746 + BLOOD_I LTR Gypsy 1 6613 0 5 703 3753 2 0 0 chr3R 15538307 15538706 -12366347 + BLOOD_LTR LTR Gypsy 1 399 0 5 703 24 53 0 0 chr3R 15539684 15539722 -12365331 + AT_rich Low_complexity Low_complexity 1 38 0 5 703 205 243 0 0 chr3R 15540577 15540614 -12364439 + G-rich Low_complexity Low_complexity 3 39 0 5 703 276 30 0 0 chr3R 15542596 15542629 -12362424 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 703 192 40 0 0 chr3R 15543409 15543434 -12361619 + (TTTCG)n Simple_repeat Simple_repeat 5 29 0 5 703 27 0 0 65 chr3R 15543825 15543871 -12361182 + AT_rich Low_complexity Low_complexity 1 43 0 5 703 291 163 0 0 chr3R 15544491 15544540 -12360513 + DNAREP1_DM LINE Penelope 20 68 -526 5 703 207 0 0 0 chr3R 15545207 15545230 -12359823 + (CTG)n Simple_repeat Simple_repeat 2 24 0 5 703 44 70 0 0 chr3R 15546783 15546869 -12358184 + AT_rich Low_complexity Low_complexity 1 86 0 5 703 207 69 0 0 chr3R 15547351 15547380 -12357673 + (TTTCG)n Simple_repeat Simple_repeat 3 31 0 5 703 23 0 0 0 chr3R 15548000 15548023 -12357030 + AT_rich Low_complexity Low_complexity 1 23 0 5 703 21 36 0 0 chr3R 15548137 15548165 -12356888 + AT_rich Low_complexity Low_complexity 1 28 0 5 703 34 0 0 0 chr3R 15551682 15551716 -12353337 + AT_rich Low_complexity Low_complexity 1 34 0 5 703 288 167 0 0 chr3R 15553317 15553389 -12351664 + (TG)n Simple_repeat Simple_repeat 1 72 0 5 703 189 132 0 0 chr3R 15553509 15553547 -12351506 + (GAA)n Simple_repeat Simple_repeat 3 40 0 5 703 28 29 0 0 chr3R 15554184 15554219 -12350834 + AT_rich Low_complexity Low_complexity 1 35 0 5 703 210 192 0 0 chr3R 15554832 15554884 -12350169 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 703 23 54 0 0 chr3R 15555956 15555993 -12349060 + AT_rich Low_complexity Low_complexity 1 37 0 5 703 198 103 0 0 chr3R 15556709 15556738 -12348315 + (CAG)n Simple_repeat Simple_repeat 1 29 0 5 703 286 280 10 0 chr3R 15556744 15556844 -12348209 + (TG)n Simple_repeat Simple_repeat 2 102 0 5 703 231 103 0 0 chr3R 15556866 15556905 -12348148 + (CAG)n Simple_repeat Simple_repeat 1 39 0 5 703 209 205 0 0 chr3R 15557661 15557700 -12347353 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 703 223 67 21 43 chr3R 15561085 15561132 -12343921 + (CACCC)n Simple_repeat Simple_repeat 5 50 0 5 703 23 0 0 0 chr3R 15561453 15561476 -12343577 + AT_rich Low_complexity Low_complexity 1 23 0 5 703 180 77 0 0 chr3R 15563752 15563778 -12341275 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 703 284 64 21 0 chr3R 15566684 15566731 -12338322 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 703 47936 3 0 0 chr3R 15570019 15575198 -12329855 + DMRT1A LINE R1 3 5181 -2 5 703 196 100 50 0 chr3R 15577058 15577098 -12327955 + (CATATA)n Simple_repeat Simple_repeat 6 47 0 5 703 207 191 0 0 chr3R 15581594 15581641 -12323412 + CT-rich Low_complexity Low_complexity 4 50 0 5 703 24 53 0 0 chr3R 15582611 15582649 -12322404 + AT_rich Low_complexity Low_complexity 1 38 0 5 703 21 57 0 0 chr3R 15582724 15582759 -12322294 + AT_rich Low_complexity Low_complexity 1 35 0 5 703 303 104 0 0 chr3R 15584324 15584372 -12320681 + (TTCGG)n Simple_repeat Simple_repeat 3 50 0 5 703 21 0 0 0 chr3R 15585197 15585218 -12319835 + AT_rich Low_complexity Low_complexity 1 21 0 5 703 221 239 15 0 chr3R 15587033 15587100 -12317953 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 703 219 125 0 0 chr3R 15587252 15587292 -12317761 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 703 232 207 0 33 chr3R 15591098 15591158 -12313895 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 5 703 232 291 0 9 chr3R 15592048 15592159 -12312894 + (CCCA)n Simple_repeat Simple_repeat 1 110 0 5 703 212 0 0 35 chr3R 15592544 15592573 -12312480 + (CAACT)n Simple_repeat Simple_repeat 2 29 0 5 703 216 0 0 0 chr3R 15594893 15594917 -12310136 + (TC)n Simple_repeat Simple_repeat 2 25 0 5 703 21 0 0 0 chr3R 15595951 15595972 -12309081 + AT_rich Low_complexity Low_complexity 1 21 0 5 704 22 35 0 0 chr3R 15606387 15606416 -12298637 + AT_rich Low_complexity Low_complexity 1 29 0 5 704 22 0 0 0 chr3R 15608869 15608891 -12296162 + AT_rich Low_complexity Low_complexity 1 22 0 5 704 21 0 0 0 chr3R 15614584 15614605 -12290448 + AT_rich Low_complexity Low_complexity 1 21 0 5 704 24 0 0 0 chr3R 15617770 15617794 -12287259 + AT_rich Low_complexity Low_complexity 1 24 0 5 704 30 27 0 0 chr3R 15618883 15618920 -12286133 + AT_rich Low_complexity Low_complexity 1 37 0 5 704 28 48 0 0 chr3R 15619281 15619323 -12285730 + AT_rich Low_complexity Low_complexity 1 42 0 5 704 35 0 0 0 chr3R 15620475 15620510 -12284543 + AT_rich Low_complexity Low_complexity 1 35 0 5 704 21 104 0 0 chr3R 15621779 15621856 -12283197 + AT_rich Low_complexity Low_complexity 1 77 0 5 704 207 189 0 0 chr3R 15622294 15622347 -12282706 + (CTG)n Simple_repeat Simple_repeat 2 54 0 5 704 310 293 55 10 chr3R 15622680 15622790 -12282263 - ROO_I LTR Pao -7524 732 638 5 704 418 250 9 9 chr3R 15622827 15622936 -12282117 - ROO_I LTR Pao -7530 726 618 5 704 222 37 0 0 chr3R 15624094 15624121 -12280932 + (CAGGC)n Simple_repeat Simple_repeat 3 29 0 5 704 26 0 0 0 chr3R 15625327 15625353 -12279700 + AT_rich Low_complexity Low_complexity 1 26 0 5 704 23 0 0 0 chr3R 15626443 15626466 -12278587 + AT_rich Low_complexity Low_complexity 1 23 0 5 704 25 51 0 0 chr3R 15628217 15628256 -12276797 + AT_rich Low_complexity Low_complexity 1 39 0 5 704 240 59 0 0 chr3R 15629605 15629639 -12275414 + (T)n Simple_repeat Simple_repeat 1 34 0 5 704 25 0 0 0 chr3R 15633909 15633934 -12271119 + AT_rich Low_complexity Low_complexity 1 25 0 5 704 204 97 0 0 chr3R 15634616 15634647 -12270406 + (CATAA)n Simple_repeat Simple_repeat 4 34 0 5 704 180 200 0 0 chr3R 15635197 15635237 -12269816 + (ATTCG)n Simple_repeat Simple_repeat 1 40 0 5 704 207 0 0 0 chr3R 15635489 15635512 -12269541 + (CATGC)n Simple_repeat Simple_repeat 3 25 0 5 704 204 97 0 0 chr3R 15640132 15640163 -12264890 + (CTTTG)n Simple_repeat Simple_repeat 5 35 0 5 704 198 0 0 0 chr3R 15640866 15640888 -12264165 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 704 225 154 0 0 chr3R 15642676 15642715 -12262338 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 704 243 88 0 0 chr3R 15647652 15647686 -12257367 + (CAATC)n Simple_repeat Simple_repeat 3 36 0 5 704 242 271 0 0 chr3R 15649951 15650010 -12255043 + (CCA)n Simple_repeat Simple_repeat 3 61 0 5 704 27 81 0 0 chr3R 15650999 15651061 -12253992 + AT_rich Low_complexity Low_complexity 1 62 0 5 704 200 289 19 0 chr3R 15651421 15651473 -12253580 + (TTCGGG)n Simple_repeat Simple_repeat 2 54 0 5 704 313 217 22 0 chr3R 15653614 15653706 -12251347 - ROO_I LTR Pao -7510 746 653 5 704 25 0 0 0 chr3R 15657548 15657573 -12247480 + AT_rich Low_complexity Low_complexity 1 25 0 5 704 25 0 0 0 chr3R 15657725 15657750 -12247303 + AT_rich Low_complexity Low_complexity 1 25 0 5 704 21 0 0 0 chr3R 15659414 15659435 -12245618 + AT_rich Low_complexity Low_complexity 1 21 0 5 704 31 0 0 0 chr3R 15662160 15662191 -12242862 + AT_rich Low_complexity Low_complexity 1 31 0 5 704 189 0 0 0 chr3R 15663356 15663377 -12241676 + (TA)n Simple_repeat Simple_repeat 1 21 0 5 704 198 71 0 0 chr3R 15664825 15664853 -12240200 + (CAG)n Simple_repeat Simple_repeat 3 30 0 5 704 222 62 0 0 chr3R 15665605 15665637 -12239416 + (CGAAT)n Simple_repeat Simple_repeat 5 36 0 5 704 42 48 0 0 chr3R 15672505 15672568 -12232485 + AT_rich Low_complexity Low_complexity 1 63 0 5 704 25 0 0 0 chr3R 15678699 15678724 -12226329 + AT_rich Low_complexity Low_complexity 1 25 0 5 704 21 71 0 0 chr3R 15679592 15679634 -12225419 + AT_rich Low_complexity Low_complexity 1 42 0 5 704 22 35 0 0 chr3R 15680086 15680115 -12224938 + AT_rich Low_complexity Low_complexity 1 29 0 5 704 22 35 0 0 chr3R 15696807 15696836 -12208217 + AT_rich Low_complexity Low_complexity 1 29 0 5 704 25 0 0 0 chr3R 15696866 15696891 -12208162 + AT_rich Low_complexity Low_complexity 1 25 0 5 704 22 0 0 0 chr3R 15696948 15696970 -12208083 + AT_rich Low_complexity Low_complexity 1 22 0 5 704 23 54 0 0 chr3R 15700585 15700622 -12204431 + AT_rich Low_complexity Low_complexity 1 37 0 5 704 185 0 40 0 chr3R 15701552 15701577 -12203476 + (TTA)n Simple_repeat Simple_repeat 3 28 0 5 704 26 0 0 0 chr3R 15703371 15703397 -12201656 + AT_rich Low_complexity Low_complexity 1 26 0 5 704 379 153 0 20 chr3R 15712155 15712255 -12192798 + (TTG)n Simple_repeat Simple_repeat 1 98 0 5 704 201 266 31 0 chr3R 15714881 15714945 -12190108 + (CAT)n Simple_repeat Simple_repeat 3 68 0 5 704 29 60 0 0 chr3R 15715519 15715569 -12189484 + AT_rich Low_complexity Low_complexity 1 50 0 5 704 40 67 0 0 chr3R 15715997 15716072 -12188981 + AT_rich Low_complexity Low_complexity 1 75 0 5 704 267 114 0 0 chr3R 15716390 15716434 -12188619 + (CAG)n Simple_repeat Simple_repeat 3 46 0 5 704 58 0 0 0 chr3R 15717587 15717645 -12187408 + AT_rich Low_complexity Low_complexity 1 58 0 5 704 204 274 0 0 chr3R 15719193 15719244 -12185809 + (CAG)n Simple_repeat Simple_repeat 2 52 0 5 704 231 204 0 0 chr3R 15719571 15719625 -12185428 + (CAG)n Simple_repeat Simple_repeat 3 56 0 5 704 30 27 0 0 chr3R 15724148 15724185 -12180868 + AT_rich Low_complexity Low_complexity 1 37 0 5 704 25 75 0 0 chr3R 15724547 15724600 -12180453 + AT_rich Low_complexity Low_complexity 1 53 0 5 705 271 175 89 40 chr3R 15731184 15731285 -12173768 + ROO_I LTR Pao 627 732 -7524 5 705 23 33 0 0 chr3R 15732125 15732155 -12172898 + AT_rich Low_complexity Low_complexity 1 30 0 5 705 30 27 0 0 chr3R 15736071 15736108 -12168945 + AT_rich Low_complexity Low_complexity 1 37 0 5 705 34 0 0 0 chr3R 15739411 15739445 -12165608 + AT_rich Low_complexity Low_complexity 1 34 0 5 705 25 0 0 0 chr3R 15746302 15746327 -12158726 + AT_rich Low_complexity Low_complexity 1 25 0 5 705 22 0 0 0 chr3R 15749906 15749928 -12155125 + AT_rich Low_complexity Low_complexity 1 22 0 5 705 22 0 0 0 chr3R 15750953 15750975 -12154078 + AT_rich Low_complexity Low_complexity 1 22 0 5 705 21 0 0 0 chr3R 15751346 15751367 -12153686 + AT_rich Low_complexity Low_complexity 1 21 0 5 705 35 0 0 0 chr3R 15756262 15756297 -12148756 + AT_rich Low_complexity Low_complexity 1 35 0 5 705 26 30 0 0 chr3R 15761162 15761195 -12143858 + AT_rich Low_complexity Low_complexity 1 33 0 5 705 201 152 0 0 chr3R 15765344 15765377 -12139676 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 705 39 38 0 0 chr3R 15767635 15767688 -12137365 + AT_rich Low_complexity Low_complexity 1 53 0 5 705 183 100 0 0 chr3R 15770162 15770192 -12134861 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 705 198 156 0 0 chr3R 15771021 15771066 -12133987 + A-rich Low_complexity Low_complexity 1 45 0 5 705 198 71 0 0 chr3R 15771397 15771425 -12133628 + (A)n Simple_repeat Simple_repeat 1 28 0 5 705 25 31 0 0 chr3R 15771886 15771918 -12133135 + AT_rich Low_complexity Low_complexity 1 32 0 5 705 225 0 0 0 chr3R 15772205 15772230 -12132823 + (A)n Simple_repeat Simple_repeat 1 25 0 5 705 244 265 0 0 chr3R 15774793 15774842 -12130211 + DNAREP1_DM LINE Penelope 23 71 -523 5 705 232 182 0 0 chr3R 15777715 15777759 -12127294 - DNAREP1_DM LINE Penelope 0 594 551 5 705 24 53 0 0 chr3R 15777993 15778031 -12127022 + AT_rich Low_complexity Low_complexity 1 38 0 5 705 207 146 0 0 chr3R 15778368 15778409 -12126644 + (TGG)n Simple_repeat Simple_repeat 1 41 0 5 705 210 143 0 0 chr3R 15784069 15784104 -12120949 + (CATA)n Simple_repeat Simple_repeat 4 38 0 5 705 31 58 0 0 chr3R 15784816 15784868 -12120185 + AT_rich Low_complexity Low_complexity 1 52 0 5 705 23 0 0 0 chr3R 15785105 15785128 -12119925 + AT_rich Low_complexity Low_complexity 1 23 0 5 705 180 111 0 0 chr3R 15788734 15788761 -12116292 + (T)n Simple_repeat Simple_repeat 1 27 0 5 705 36 40 0 0 chr3R 15789370 15789420 -12115633 + AT_rich Low_complexity Low_complexity 1 50 0 5 705 180 97 0 0 chr3R 15794789 15794820 -12110233 + (A)n Simple_repeat Simple_repeat 1 31 0 5 705 32 26 0 0 chr3R 15795575 15795614 -12109439 + AT_rich Low_complexity Low_complexity 1 39 0 5 705 355 194 10 10 chr3R 15796108 15796207 -12108846 + (ACTG)n Simple_repeat Simple_repeat 3 101 0 5 705 29 0 0 0 chr3R 15796781 15796810 -12108243 + AT_rich Low_complexity Low_complexity 1 29 0 5 705 28 0 0 0 chr3R 15796871 15796899 -12108154 + AT_rich Low_complexity Low_complexity 1 28 0 5 705 27 73 0 0 chr3R 15798081 15798136 -12106917 + AT_rich Low_complexity Low_complexity 1 55 0 5 705 24 67 0 0 chr3R 15798561 15798606 -12106447 + AT_rich Low_complexity Low_complexity 1 45 0 5 705 24 0 0 0 chr3R 15805259 15805283 -12099770 + AT_rich Low_complexity Low_complexity 1 24 0 5 705 21 0 0 0 chr3R 15811515 15811536 -12093517 + AT_rich Low_complexity Low_complexity 1 21 0 5 705 188 100 25 0 chr3R 15812775 15812815 -12092238 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 705 22 0 0 0 chr3R 15816571 15816593 -12088460 + AT_rich Low_complexity Low_complexity 1 22 0 5 705 21 0 0 0 chr3R 15816643 15816664 -12088389 + AT_rich Low_complexity Low_complexity 1 21 0 5 705 279 93 0 0 chr3R 15817352 15817395 -12087658 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 705 22 0 0 0 chr3R 15818109 15818131 -12086922 + AT_rich Low_complexity Low_complexity 1 22 0 5 705 217 132 0 0 chr3R 15820022 15820060 -12084993 + (GAGTG)n Simple_repeat Simple_repeat 3 40 0 5 705 40 21 0 0 chr3R 15821955 15822002 -12083051 + AT_rich Low_complexity Low_complexity 1 47 0 5 705 192 77 0 0 chr3R 15822312 15822338 -12082715 + (TATAG)n Simple_repeat Simple_repeat 3 28 0 5 705 231 36 0 0 chr3R 15823249 15823277 -12081776 + (CGAAA)n Simple_repeat Simple_repeat 3 30 0 5 705 195 184 0 0 chr3R 15825712 15825750 -12079303 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 5 705 283 51 0 0 chr3R 15827420 15827459 -12077594 + Rehavkus-1_DY DNA Tc1 1 38 -5577 5 705 704 65 0 0 chr3R 15827467 15827560 -12077493 + Rehavkus-1_DY DNA Tc1 5647 5738 0 5 705 27 0 0 0 chr3R 15831734 15831761 -12073292 + AT_rich Low_complexity Low_complexity 1 27 0 5 705 276 149 0 0 chr3R 15835594 15835641 -12069412 + (CAG)n Simple_repeat Simple_repeat 1 47 0 5 705 195 139 0 0 chr3R 15835729 15835765 -12069288 + (CAG)n Simple_repeat Simple_repeat 1 36 0 5 705 260 123 82 0 chr3R 15835995 15836068 -12068985 + ROO_I LTR Pao 652 730 -7526 5 705 302 165 0 96 chr3R 15836085 15836179 -12068874 + ROO_I LTR Pao 640 724 -7532 5 705 255 239 21 21 chr3R 15836241 15836335 -12068718 + (CAG)n Simple_repeat Simple_repeat 3 96 0 5 705 196 131 21 21 chr3R 15836779 15836826 -12068227 + (CAG)n Simple_repeat Simple_repeat 1 47 0 5 705 210 171 0 0 chr3R 15836858 15836899 -12068154 + (CAG)n Simple_repeat Simple_repeat 2 42 0 5 705 201 94 0 0 chr3R 15837159 15837191 -12067862 + (CAG)n Simple_repeat Simple_repeat 3 34 0 5 705 198 0 0 0 chr3R 15838273 15838295 -12066758 + (TCG)n Simple_repeat Simple_repeat 2 23 0 5 705 1485 137 149 10 chr3R 15838526 15838821 -12066232 + DMRP1 Unknown Unknown 1 336 -10 5 705 34 24 0 0 chr3R 15844132 15844173 -12060880 + AT_rich Low_complexity Low_complexity 1 41 0 5 705 25 83 0 0 chr3R 15848697 15848757 -12056296 + AT_rich Low_complexity Low_complexity 1 60 0 5 705 21 0 0 0 chr3R 15852331 15852352 -12052701 + AT_rich Low_complexity Low_complexity 1 21 0 5 705 21 0 0 0 chr3R 15857444 15857465 -12047588 + AT_rich Low_complexity Low_complexity 1 21 0 5 706 275 257 14 0 chr3R 15861540 15861614 -12043439 + (CTG)n Simple_repeat Simple_repeat 3 77 0 5 706 29 47 0 0 chr3R 15862041 15862084 -12042969 + AT_rich Low_complexity Low_complexity 1 43 0 5 706 23 0 0 0 chr3R 15864173 15864196 -12040857 + AT_rich Low_complexity Low_complexity 1 23 0 5 706 26 0 0 0 chr3R 15871404 15871430 -12033623 + AT_rich Low_complexity Low_complexity 1 26 0 5 706 29 47 0 0 chr3R 15875197 15875240 -12029813 + AT_rich Low_complexity Low_complexity 1 43 0 5 706 21 0 0 0 chr3R 15876961 15876982 -12028071 + AT_rich Low_complexity Low_complexity 1 21 0 5 706 21 36 0 0 chr3R 15880383 15880411 -12024642 + AT_rich Low_complexity Low_complexity 1 28 0 5 706 23 33 0 0 chr3R 15883308 15883338 -12021715 + AT_rich Low_complexity Low_complexity 1 30 0 5 706 21 36 0 0 chr3R 15884769 15884797 -12020256 + AT_rich Low_complexity Low_complexity 1 28 0 5 706 204 293 0 0 chr3R 15888109 15888167 -12016886 + GA-rich Low_complexity Low_complexity 4 61 0 5 706 210 132 0 50 chr3R 15888126 15888166 -12016887 + A-rich Low_complexity Low_complexity 1 38 0 5 706 23 0 0 0 chr3R 15890819 15890842 -12014211 + AT_rich Low_complexity Low_complexity 1 23 0 5 706 23 0 0 0 chr3R 15890973 15890996 -12014057 + AT_rich Low_complexity Low_complexity 1 23 0 5 706 246 61 20 39 chr3R 15892453 15892504 -12012549 + (TATG)n Simple_repeat Simple_repeat 2 51 0 5 706 198 192 0 0 chr3R 15894739 15894791 -12010262 + GA-rich Low_complexity Low_complexity 2 53 0 5 706 183 80 0 0 chr3R 15896242 15896267 -12008786 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 5 706 23 54 0 0 chr3R 15898366 15898403 -12006650 + AT_rich Low_complexity Low_complexity 1 37 0 5 706 279 265 0 0 chr3R 15899440 15899523 -12005530 + (ACTG)n Simple_repeat Simple_repeat 3 85 0 5 706 24 32 0 0 chr3R 15901522 15901553 -12003500 + AT_rich Low_complexity Low_complexity 1 31 0 5 706 205 162 0 0 chr3R 15901906 15901943 -12003110 + (CGGAA)n Simple_repeat Simple_repeat 1 37 0 5 706 24 67 0 0 chr3R 15908518 15908563 -11996490 + AT_rich Low_complexity Low_complexity 1 45 0 5 706 33 25 0 0 chr3R 15909624 15909664 -11995389 + AT_rich Low_complexity Low_complexity 1 40 0 5 706 28 0 0 0 chr3R 15911632 15911660 -11993393 + AT_rich Low_complexity Low_complexity 1 28 0 5 706 22 0 0 0 chr3R 15913878 15913900 -11991153 + AT_rich Low_complexity Low_complexity 1 22 0 5 706 31 26 0 0 chr3R 15915703 15915741 -11989312 + AT_rich Low_complexity Low_complexity 1 38 0 5 706 208 139 0 0 chr3R 15921064 15921100 -11983953 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 706 22 0 0 0 chr3R 15921413 15921435 -11983618 + AT_rich Low_complexity Low_complexity 1 22 0 5 706 228 136 0 0 chr3R 15924084 15924128 -11980925 - HOBO DNA hAT 0 3016 2973 5 706 65 25 0 0 chr3R 15924231 15924310 -11980743 + AT_rich Low_complexity Low_complexity 1 79 0 5 706 317 205 24 0 chr3R 15924315 15924398 -11980655 - HOBO DNA hAT -2739 277 193 5 706 1024 128 26 11 chr3R 15924447 15924636 -11980417 - HOBO DNA hAT -2824 192 1 5 706 198 192 0 0 chr3R 15929598 15929650 -11975403 + (CAA)n Simple_repeat Simple_repeat 1 52 0 5 706 30 45 0 0 chr3R 15929925 15929969 -11975084 + AT_rich Low_complexity Low_complexity 1 44 0 5 706 210 118 0 0 chr3R 15930348 15930382 -11974671 + (CAG)n Simple_repeat Simple_repeat 3 36 0 5 706 209 191 0 0 chr3R 15932287 15932329 -11972724 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 706 183 100 0 0 chr3R 15932342 15932372 -11972681 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 706 307 49 0 0 chr3R 15934705 15934746 -11970307 + Transib-N1_DM DNA Transib 1 41 -473 5 706 1764 98 50 41 chr3R 15934779 15935119 -11969934 + Transib-N1_DM DNA Transib 129 471 -43 5 706 419 169 11 43 chr3R 15935111 15935204 -11969849 + DNAREP1_DM LINE Penelope 400 489 -105 5 706 2297 0 0 0 chr3R 15935314 15935590 -11969463 - Copia_LTR LTR Copia 0 276 1 5 706 39221 1 0 1 chr3R 15935590 15940186 -11964867 - Copia_I LTR Copia 0 4593 1 5 706 2297 0 0 0 chr3R 15940186 15940462 -11964591 - Copia_LTR LTR Copia 0 276 1 5 706 277 175 0 17 chr3R 15943515 15943573 -11961480 - DNAREP1_DM LINE Penelope -110 484 428 5 706 25 65 0 0 chr3R 15945420 15945466 -11959587 + AT_rich Low_complexity Low_complexity 1 46 0 5 706 22 106 0 0 chr3R 15945517 15945602 -11959451 + AT_rich Low_complexity Low_complexity 1 85 0 5 706 22 35 0 0 chr3R 15951594 15951623 -11953430 + AT_rich Low_complexity Low_complexity 1 29 0 5 706 404 130 0 0 chr3R 15951752 15951821 -11953232 + DNAREP1_DM LINE Penelope 515 583 -11 5 706 30 0 0 0 chr3R 15952869 15952899 -11952154 + AT_rich Low_complexity Low_complexity 1 30 0 5 706 23 33 0 0 chr3R 15953427 15953457 -11951596 + AT_rich Low_complexity Low_complexity 1 30 0 5 706 234 105 0 0 chr3R 15954268 15954306 -11950747 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 706 214 147 0 0 chr3R 15955368 15955402 -11949651 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 706 22 0 0 0 chr3R 15956446 15956468 -11948585 + AT_rich Low_complexity Low_complexity 1 22 0 5 706 212 238 0 0 chr3R 15958301 15958343 -11946710 + (CTG)n Simple_repeat Simple_repeat 3 44 0 5 706 24 0 0 0 chr3R 15962209 15962233 -11942820 + AT_rich Low_complexity Low_complexity 1 24 0 5 706 201 234 0 72 chr3R 15964431 15964514 -11940539 + A-rich Low_complexity Low_complexity 4 80 0 5 706 341 58 19 0 chr3R 15966394 15966446 -11938607 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 706 22 0 0 0 chr3R 15971152 15971174 -11933879 + AT_rich Low_complexity Low_complexity 1 22 0 5 706 21 0 0 0 chr3R 15971295 15971316 -11933737 + AT_rich Low_complexity Low_complexity 1 21 0 5 706 21 0 0 0 chr3R 15972591 15972612 -11932441 + AT_rich Low_complexity Low_complexity 1 21 0 5 706 22 0 0 0 chr3R 15975269 15975291 -11929762 + AT_rich Low_complexity Low_complexity 1 22 0 5 706 180 111 0 0 chr3R 15977951 15977978 -11927075 + (TTCTCC)n Simple_repeat Simple_repeat 6 32 0 5 706 50 18 0 0 chr3R 15978377 15978434 -11926619 + AT_rich Low_complexity Low_complexity 1 57 0 5 706 3742 2 0 0 chr3R 15982467 15982895 -11922158 - ROO_LTR LTR Pao 0 428 1 5 88 70168 1 2 2 chr3R 15982895 15991151 -11913902 - ROO_I LTR Pao 0 8256 1 5 707 3742 2 0 0 chr3R 15991151 15991579 -11913474 - ROO_LTR LTR Pao 0 428 1 5 707 238 127 13 66 chr3R 15997724 15997800 -11907253 + (TAA)n Simple_repeat Simple_repeat 2 73 0 5 707 23 33 0 0 chr3R 15998268 15998298 -11906755 + AT_rich Low_complexity Low_complexity 1 30 0 5 707 36 40 0 0 chr3R 16000544 16000594 -11904459 + AT_rich Low_complexity Low_complexity 1 50 0 5 707 221 83 0 27 chr3R 16001559 16001596 -11903457 + (CAAAAA)n Simple_repeat Simple_repeat 5 40 0 5 707 201 39 0 0 chr3R 16001614 16001640 -11903413 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 707 23 0 0 0 chr3R 16002103 16002126 -11902927 + AT_rich Low_complexity Low_complexity 1 23 0 5 707 216 67 0 0 chr3R 16003196 16003226 -11901827 + (CAG)n Simple_repeat Simple_repeat 2 31 0 5 707 239 191 0 0 chr3R 16006653 16006700 -11898353 + DNAREP1_DM LINE Penelope 7 53 -541 5 707 254 229 0 0 chr3R 16006712 16006773 -11898280 + DNAREP1_DM LINE Penelope 270 330 -264 5 707 43 71 0 0 chr3R 16007140 16007225 -11897828 + AT_rich Low_complexity Low_complexity 1 85 0 5 707 239 296 87 34 chr3R 16007322 16007532 -11897521 + DNAREP1_DM LINE Penelope 16 373 -221 5 707 202 228 17 17 chr3R 16008963 16009021 -11896032 + (CAG)n Simple_repeat Simple_repeat 3 60 0 5 707 21 0 0 0 chr3R 16011808 16011829 -11893224 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 188 213 0 16 chr3R 16012459 16012521 -11892532 + (CACTC)n Simple_repeat Simple_repeat 3 63 0 5 707 33 25 0 0 chr3R 16012925 16012965 -11892088 + AT_rich Low_complexity Low_complexity 1 40 0 5 707 27 0 0 0 chr3R 16013073 16013100 -11891953 + AT_rich Low_complexity Low_complexity 1 27 0 5 707 44 0 0 0 chr3R 16013700 16013744 -11891309 + AT_rich Low_complexity Low_complexity 1 44 0 5 707 27 0 0 0 chr3R 16014745 16014772 -11890281 + AT_rich Low_complexity Low_complexity 1 27 0 5 707 273 167 0 0 chr3R 16015994 16016048 -11889005 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 707 28 0 0 0 chr3R 16017315 16017343 -11887710 + AT_rich Low_complexity Low_complexity 1 28 0 5 707 186 43 0 0 chr3R 16017935 16017958 -11887095 + (TTTCG)n Simple_repeat Simple_repeat 5 27 0 5 707 27 0 0 0 chr3R 16018272 16018299 -11886754 + AT_rich Low_complexity Low_complexity 1 27 0 5 707 22 35 0 0 chr3R 16020440 16020469 -11884584 + AT_rich Low_complexity Low_complexity 1 29 0 5 707 206 250 0 0 chr3R 16022167 16022219 -11882834 + (CAGA)n Simple_repeat Simple_repeat 3 54 0 5 707 183 42 0 0 chr3R 16022463 16022487 -11882566 + (CAGTG)n Simple_repeat Simple_repeat 3 26 0 5 707 30 69 0 0 chr3R 16023033 16023091 -11881962 + AT_rich Low_complexity Low_complexity 1 58 0 5 707 212 135 0 51 chr3R 16024885 16024924 -11880129 + (TATG)n Simple_repeat Simple_repeat 3 39 0 5 707 342 0 0 0 chr3R 16030354 16030392 -11874661 + (GA)n Simple_repeat Simple_repeat 2 39 0 5 707 23 54 0 0 chr3R 16031975 16032012 -11873041 + AT_rich Low_complexity Low_complexity 1 37 0 5 707 21 0 0 0 chr3R 16033607 16033628 -11871425 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 183 100 0 0 chr3R 16036990 16037020 -11868033 + (CTG)n Simple_repeat Simple_repeat 2 31 0 5 707 200 255 0 0 chr3R 16039359 16039410 -11865643 + G-rich Low_complexity Low_complexity 1 51 0 5 707 210 71 0 0 chr3R 16040521 16040549 -11864504 + (TTTTTA)n Simple_repeat Simple_repeat 3 30 0 5 707 207 69 0 0 chr3R 16040640 16040669 -11864384 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 707 21 0 0 0 chr3R 16043348 16043369 -11861684 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 189 121 0 0 chr3R 16045445 16045478 -11859575 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 707 21 0 0 0 chr3R 16051578 16051599 -11853454 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 183 100 0 0 chr3R 16052502 16052532 -11852521 + (CAG)n Simple_repeat Simple_repeat 2 31 0 5 707 204 120 60 0 chr3R 16052696 16052746 -11852307 + (TAA)n Simple_repeat Simple_repeat 3 55 0 5 707 43 56 0 0 chr3R 16052820 16052891 -11852162 + AT_rich Low_complexity Low_complexity 1 71 0 5 707 282 95 0 0 chr3R 16053361 16053403 -11851650 + (CAG)n Simple_repeat Simple_repeat 2 43 0 5 707 33 25 0 0 chr3R 16056178 16056218 -11848835 + AT_rich Low_complexity Low_complexity 1 40 0 5 707 195 162 0 0 chr3R 16056710 16056747 -11848306 + (ATG)n Simple_repeat Simple_repeat 2 38 0 5 707 225 94 0 0 chr3R 16058775 16058807 -11846246 + (CATA)n Simple_repeat Simple_repeat 4 35 0 5 707 189 0 0 0 chr3R 16060089 16060110 -11844943 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 707 264 120 0 0 chr3R 16063971 16064021 -11841032 + (CAG)n Simple_repeat Simple_repeat 1 50 0 5 707 325 258 0 0 chr3R 16064511 16064608 -11840445 + CT-rich Low_complexity Low_complexity 3 99 0 5 707 270 125 0 0 chr3R 16066066 16066114 -11838939 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 707 22 35 0 0 chr3R 16068402 16068431 -11836622 + AT_rich Low_complexity Low_complexity 1 29 0 5 707 24 0 0 0 chr3R 16068557 16068581 -11836472 + AT_rich Low_complexity Low_complexity 1 24 0 5 707 210 162 0 0 chr3R 16070442 16070479 -11834574 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 707 30609 1 0 0 chr3R 16071058 16074603 -11830450 - FW_DM LINE Jockey 0 4692 1148 5 707 36 0 0 0 chr3R 16074685 16074721 -11830332 + AT_rich Low_complexity Low_complexity 1 36 0 5 707 258 125 0 0 chr3R 16075595 16075643 -11829410 + (A)n Simple_repeat Simple_repeat 1 48 0 5 707 21 0 0 0 chr3R 16078309 16078330 -11826723 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 223 267 40 0 chr3R 16079632 16079707 -11825346 + CT-rich Low_complexity Low_complexity 1 78 0 5 707 21 0 0 0 chr3R 16080260 16080281 -11824772 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 211 200 0 0 chr3R 16082888 16082923 -11822130 + (CATA)n Simple_repeat Simple_repeat 4 38 0 5 707 195 139 0 0 chr3R 16083478 16083514 -11821539 + (TTG)n Simple_repeat Simple_repeat 1 36 0 5 707 501 120 0 0 chr3R 16087562 16087654 -11817399 + (CAGT)n Simple_repeat Simple_repeat 1 92 0 5 707 180 176 0 0 chr3R 16087789 16087823 -11817230 + (CATA)n Simple_repeat Simple_repeat 3 36 0 5 707 22 56 0 0 chr3R 16088114 16088150 -11816903 + AT_rich Low_complexity Low_complexity 1 36 0 5 707 23 68 0 0 chr3R 16089206 16089250 -11815803 + AT_rich Low_complexity Low_complexity 1 44 0 5 707 217 219 0 0 chr3R 16091906 16091947 -11813106 + (CATA)n Simple_repeat Simple_repeat 2 42 0 5 707 2333 4 0 4 chr3R 16092292 16092568 -11812485 + BURDOCK_LTR LTR Gypsy 1 275 0 5 707 50814 2 0 0 chr3R 16092568 16098429 -11806624 + BURDOCK_I LTR Gypsy 1 5860 0 5 707 2333 4 0 4 chr3R 16098430 16098706 -11806347 + BURDOCK_LTR LTR Gypsy 1 275 0 5 707 209 280 0 0 chr3R 16100600 16100650 -11804403 + (TATG)n Simple_repeat Simple_repeat 2 51 0 5 707 21 0 0 0 chr3R 16106258 16106279 -11798774 + AT_rich Low_complexity Low_complexity 1 21 0 5 707 25 51 0 0 chr3R 16106368 16106407 -11798646 + AT_rich Low_complexity Low_complexity 1 39 0 5 707 207 232 0 0 chr3R 16108699 16108755 -11796298 + (CAA)n Simple_repeat Simple_repeat 1 56 0 5 707 209 255 0 0 chr3R 16109496 16109543 -11795510 + (CTG)n Simple_repeat Simple_repeat 3 49 0 5 707 28 0 0 0 chr3R 16110404 16110432 -11794621 + AT_rich Low_complexity Low_complexity 1 28 0 5 707 189 0 0 0 chr3R 16111669 16111690 -11793363 + (TG)n Simple_repeat Simple_repeat 1 21 0 5 707 234 141 12 37 chr3R 16113987 16114068 -11790985 + ROO_I LTR Pao 651 729 -7527 5 707 180 0 0 0 chr3R 16114216 16114236 -11790817 + (CAG)n Simple_repeat Simple_repeat 1 20 0 5 707 347 182 0 13 chr3R 16114346 16114424 -11790629 + ROO_I LTR Pao 652 728 -7528 5 707 234 150 0 0 chr3R 16114558 16114598 -11790455 + (CAA)n Simple_repeat Simple_repeat 1 40 0 5 707 212 227 0 0 chr3R 16114621 16114665 -11790388 + (CAG)n Simple_repeat Simple_repeat 1 44 0 5 707 23 78 0 0 chr3R 16116561 16116612 -11788441 + AT_rich Low_complexity Low_complexity 1 51 0 5 707 232 202 0 175 chr3R 16119561 16119675 -11785378 + ROO_I LTR Pao 641 734 -7522 5 707 207 276 0 41 chr3R 16119738 16119859 -11785194 + (CAG)n Simple_repeat Simple_repeat 3 118 0 5 707 206 136 0 22 chr3R 16119892 16119937 -11785116 + (CAG)n Simple_repeat Simple_repeat 2 45 0 5 707 321 188 24 36 chr3R 16120370 16120453 -11784600 + ROO_I LTR Pao 651 732 -7524 5 707 219 220 0 33 chr3R 16120562 16120623 -11784430 + (CAG)n Simple_repeat Simple_repeat 3 61 0 5 707 210 71 0 0 chr3R 16120822 16120850 -11784203 + (CAG)n Simple_repeat Simple_repeat 3 30 0 5 708 244 257 0 0 chr3R 16122902 16122976 -11782077 + GA-rich Low_complexity Low_complexity 3 76 0 5 708 214 151 18 36 chr3R 16123433 16123488 -11781565 + (CAA)n Simple_repeat Simple_repeat 1 54 0 5 708 31 0 0 0 chr3R 16127284 16127315 -11777738 + AT_rich Low_complexity Low_complexity 1 31 0 5 708 21 0 0 0 chr3R 16127988 16128009 -11777044 + AT_rich Low_complexity Low_complexity 1 21 0 5 708 198 71 0 0 chr3R 16128125 16128153 -11776900 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 5 708 23 68 0 0 chr3R 16131645 16131689 -11773364 + AT_rich Low_complexity Low_complexity 1 44 0 5 708 236 118 0 0 chr3R 16131713 16131747 -11773306 - LINEJ1_DM LINE Jockey -517 4503 4470 5 708 33 0 0 0 chr3R 16134390 16134423 -11770630 + AT_rich Low_complexity Low_complexity 1 33 0 5 708 218 273 0 0 chr3R 16135741 16135807 -11769246 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 708 23 0 0 0 chr3R 16141743 16141766 -11763287 + AT_rich Low_complexity Low_complexity 1 23 0 5 708 214 261 0 0 chr3R 16143759 16143824 -11761229 + A-rich Low_complexity Low_complexity 1 65 0 5 708 21 57 0 0 chr3R 16144329 16144364 -11760689 + AT_rich Low_complexity Low_complexity 1 35 0 5 708 291 122 0 0 chr3R 16149239 16149288 -11755765 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 708 24 32 0 0 chr3R 16150059 16150090 -11754963 + AT_rich Low_complexity Low_complexity 1 31 0 5 708 195 100 0 0 chr3R 16151281 16151311 -11753742 + (GCTG)n Simple_repeat Simple_repeat 1 30 0 5 708 241 246 0 0 chr3R 16153127 16153184 -11751869 + (CCA)n Simple_repeat Simple_repeat 1 57 0 5 708 246 125 0 0 chr3R 16156112 16156160 -11748893 + (CTG)n Simple_repeat Simple_repeat 3 50 0 5 708 3990 2 0 0 chr3R 16156775 16157203 -11747850 + ROO_LTR LTR Pao 1 428 0 5 708 31 26 0 0 chr3R 16158445 16158483 -11746570 + AT_rich Low_complexity Low_complexity 1 38 0 5 708 203 171 0 0 chr3R 16158717 16158758 -11746295 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 708 21 57 0 0 chr3R 16159937 16159972 -11745081 + AT_rich Low_complexity Low_complexity 1 35 0 5 708 189 0 0 0 chr3R 16162456 16162477 -11742576 + (TTA)n Simple_repeat Simple_repeat 2 22 0 5 708 44 20 0 0 chr3R 16166412 16166463 -11738590 + AT_rich Low_complexity Low_complexity 1 51 0 5 708 279 175 143 0 chr3R 16168876 16168939 -11736114 - DNAREP1_DM LINE Penelope -1 593 522 5 708 391 143 0 41 chr3R 16169080 16169153 -11735900 - DNAREP1_DM LINE Penelope -524 70 1 5 708 30 27 0 0 chr3R 16171183 16171220 -11733833 + AT_rich Low_complexity Low_complexity 1 37 0 5 708 266 275 8 48 chr3R 16171377 16171503 -11733550 + (CTG)n Simple_repeat Simple_repeat 2 122 0 5 708 260 203 0 42 chr3R 16173367 16173439 -11731614 + (CAA)n Simple_repeat Simple_repeat 1 69 0 5 708 289 221 0 25 chr3R 16173464 16173543 -11731510 + (TG)n Simple_repeat Simple_repeat 1 77 0 5 708 30 27 0 0 chr3R 16174585 16174622 -11730431 + AT_rich Low_complexity Low_complexity 1 37 0 5 708 22 70 0 0 chr3R 16175355 16175398 -11729655 + AT_rich Low_complexity Low_complexity 1 43 0 5 708 27 81 0 0 chr3R 16175454 16175516 -11729537 + AT_rich Low_complexity Low_complexity 1 62 0 5 708 25 31 0 0 chr3R 16178311 16178343 -11726710 + AT_rich Low_complexity Low_complexity 1 32 0 5 708 195 100 0 0 chr3R 16178850 16178880 -11726173 + (TTG)n Simple_repeat Simple_repeat 1 30 0 5 708 21 71 0 0 chr3R 16179987 16180029 -11725024 + AT_rich Low_complexity Low_complexity 1 42 0 5 708 395 154 0 0 chr3R 16180687 16180752 -11724301 + DNAREP1_DM LINE Penelope 524 588 -6 5 708 23 54 0 0 chr3R 16181773 16181810 -11723243 + AT_rich Low_complexity Low_complexity 1 37 0 5 708 236 174 43 0 chr3R 16182940 16183009 -11722044 + (GGATG)n Simple_repeat Simple_repeat 4 75 0 5 708 270 0 0 0 chr3R 16184523 16184553 -11720500 + (A)n Simple_repeat Simple_repeat 1 30 0 5 708 202 53 24 73 chr3R 16185638 16185679 -11719374 + (TTAAA)n Simple_repeat Simple_repeat 4 42 0 5 708 34 65 0 0 chr3R 16185707 16185769 -11719284 + AT_rich Low_complexity Low_complexity 1 62 0 5 708 209 108 27 0 chr3R 16187693 16187730 -11717323 + (TTTTG)n Simple_repeat Simple_repeat 1 38 0 5 708 22 35 0 0 chr3R 16188396 16188425 -11716628 + AT_rich Low_complexity Low_complexity 1 29 0 5 708 231 157 0 0 chr3R 16188630 16188681 -11716372 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 708 215 222 0 0 chr3R 16189372 16189417 -11715636 + (CAT)n Simple_repeat Simple_repeat 1 45 0 5 708 21 0 0 0 chr3R 16189716 16189737 -11715316 + AT_rich Low_complexity Low_complexity 1 21 0 5 708 23 0 0 0 chr3R 16191747 16191770 -11713283 + AT_rich Low_complexity Low_complexity 1 23 0 5 708 189 74 0 0 chr3R 16194898 16194925 -11710128 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 5 708 41 36 0 0 chr3R 16195140 16195195 -11709858 + AT_rich Low_complexity Low_complexity 1 55 0 5 708 209 186 0 0 chr3R 16196078 16196121 -11708932 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 708 234 270 0 0 chr3R 16196752 16196815 -11708238 - DNAREP1_DM LINE Penelope 0 594 532 5 708 215 250 28 0 chr3R 16198406 16198478 -11706575 + (TG)n Simple_repeat Simple_repeat 1 74 0 5 708 241 309 0 0 chr3R 16201372 16201440 -11703613 + (CTGGGG)n Simple_repeat Simple_repeat 6 73 0 5 708 276 175 0 0 chr3R 16203487 16203550 -11701503 + (TG)n Simple_repeat Simple_repeat 1 63 0 5 708 36 23 0 0 chr3R 16204085 16204128 -11700925 + AT_rich Low_complexity Low_complexity 1 43 0 5 708 192 167 0 0 chr3R 16205142 16205190 -11699863 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 708 188 167 21 0 chr3R 16205370 16205418 -11699635 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 708 21 36 0 0 chr3R 16209594 16209622 -11695431 + AT_rich Low_complexity Low_complexity 1 28 0 5 708 203 315 21 11 chr3R 16210312 16210405 -11694648 + (CGGA)n Simple_repeat Simple_repeat 4 97 0 5 708 219 231 0 0 chr3R 16210334 16210386 -11694667 + (ACTG)n Simple_repeat Simple_repeat 3 54 0 5 708 21 0 0 0 chr3R 16210767 16210788 -11694265 + AT_rich Low_complexity Low_complexity 1 21 0 5 708 393 22 0 0 chr3R 16211924 16211970 -11693083 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 708 26 74 0 0 chr3R 16212266 16212320 -11692733 + AT_rich Low_complexity Low_complexity 1 54 0 5 708 180 217 0 0 chr3R 16212555 16212601 -11692452 + (CGGA)n Simple_repeat Simple_repeat 4 49 0 5 708 255 157 0 0 chr3R 16212894 16212945 -11692108 + (TCG)n Simple_repeat Simple_repeat 3 53 0 5 708 29 0 0 0 chr3R 16216884 16216913 -11688140 + AT_rich Low_complexity Low_complexity 1 29 0 5 708 188 67 33 0 chr3R 16218978 16219008 -11686045 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 708 21 36 0 0 chr3R 16219269 16219297 -11685756 + AT_rich Low_complexity Low_complexity 1 28 0 5 708 216 122 0 0 chr3R 16219761 16219802 -11685251 + (TTG)n Simple_repeat Simple_repeat 2 42 0 5 708 235 220 0 0 chr3R 16220366 16220416 -11684637 + (TCTG)n Simple_repeat Simple_repeat 4 53 0 5 708 21 0 0 0 chr3R 16220673 16220694 -11684359 + AT_rich Low_complexity Low_complexity 1 21 0 5 708 211 224 0 17 chr3R 16223424 16223483 -11681570 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 708 312 127 0 0 chr3R 16226264 16226319 -11678734 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 708 212 100 0 48 chr3R 16226813 16226855 -11678198 + (TTG)n Simple_repeat Simple_repeat 2 41 0 5 708 29 90 0 0 chr3R 16228505 16228583 -11676470 + AT_rich Low_complexity Low_complexity 1 78 0 5 708 23 0 0 0 chr3R 16228662 16228685 -11676368 + AT_rich Low_complexity Low_complexity 1 23 0 5 708 38 0 0 0 chr3R 16229326 16229364 -11675689 + AT_rich Low_complexity Low_complexity 1 38 0 5 708 256 250 0 0 chr3R 16229392 16229444 -11675609 - DNAREP1_DM LINE Penelope -538 56 5 5 708 21 0 0 0 chr3R 16233774 16233795 -11671258 + AT_rich Low_complexity Low_complexity 1 21 0 5 708 30 77 0 0 chr3R 16233861 16233926 -11671127 + AT_rich Low_complexity Low_complexity 1 65 0 5 708 29 28 0 0 chr3R 16235019 16235055 -11669998 + AT_rich Low_complexity Low_complexity 1 36 0 5 708 22 88 0 0 chr3R 16236147 16236204 -11668849 + AT_rich Low_complexity Low_complexity 1 57 0 5 708 29 90 0 0 chr3R 16239299 16239377 -11665676 + AT_rich Low_complexity Low_complexity 1 78 0 5 708 290 287 0 19 chr3R 16241012 16241115 -11663938 + (TTG)n Simple_repeat Simple_repeat 2 102 0 5 708 21 57 0 0 chr3R 16241652 16241687 -11663366 + AT_rich Low_complexity Low_complexity 1 35 0 5 708 26 50 0 0 chr3R 16242923 16242963 -11662090 + AT_rich Low_complexity Low_complexity 1 40 0 5 708 21 0 0 0 chr3R 16243971 16243992 -11661061 + AT_rich Low_complexity Low_complexity 1 21 0 5 708 25 0 0 0 chr3R 16244556 16244581 -11660472 + AT_rich Low_complexity Low_complexity 1 25 0 5 708 25 31 0 0 chr3R 16246593 16246625 -11658428 + AT_rich Low_complexity Low_complexity 1 32 0 5 708 23 86 0 0 chr3R 16246696 16246754 -11658299 + AT_rich Low_complexity Low_complexity 1 58 0 5 708 23 78 0 0 chr3R 16248037 16248088 -11656965 + AT_rich Low_complexity Low_complexity 1 51 0 5 708 207 0 0 0 chr3R 16251519 16251542 -11653511 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 708 180 0 0 0 chr3R 16252517 16252537 -11652516 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 709 33 80 0 0 chr3R 16254223 16254298 -11650755 + AT_rich Low_complexity Low_complexity 1 75 0 5 709 23 0 0 0 chr3R 16254412 16254435 -11650618 + AT_rich Low_complexity Low_complexity 1 23 0 5 709 23 33 0 0 chr3R 16257047 16257077 -11647976 + AT_rich Low_complexity Low_complexity 1 30 0 5 709 22 70 0 0 chr3R 16257105 16257148 -11647905 + AT_rich Low_complexity Low_complexity 1 43 0 5 709 21 82 0 0 chr3R 16258933 16258982 -11646071 + AT_rich Low_complexity Low_complexity 1 49 0 5 709 219 189 0 0 chr3R 16259441 16259494 -11645559 + (CACCAT)n Simple_repeat Simple_repeat 3 55 0 5 709 22 35 0 0 chr3R 16260629 16260658 -11644395 + AT_rich Low_complexity Low_complexity 1 29 0 5 709 255 191 0 0 chr3R 16261046 16261109 -11643944 + (CAGA)n Simple_repeat Simple_repeat 3 65 0 5 709 200 206 0 0 chr3R 16264381 16264415 -11640638 + (TTG)n Simple_repeat Simple_repeat 2 35 0 5 709 234 0 0 0 chr3R 16267317 16267343 -11637710 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 5 709 252 0 0 0 chr3R 16270689 16270717 -11634336 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 709 212 303 20 10 chr3R 16270811 16270911 -11634142 + GA-rich Low_complexity Low_complexity 5 105 0 5 709 22 80 0 0 chr3R 16273273 16273323 -11631730 + AT_rich Low_complexity Low_complexity 1 50 0 5 709 29 0 0 0 chr3R 16276407 16276436 -11628617 + AT_rich Low_complexity Low_complexity 1 29 0 5 709 23 33 0 0 chr3R 16276479 16276509 -11628544 + AT_rich Low_complexity Low_complexity 1 30 0 5 709 180 0 0 0 chr3R 16278831 16278851 -11626202 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 709 225 0 0 0 chr3R 16279445 16279470 -11625583 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 709 32 0 0 0 chr3R 16280421 16280453 -11624600 + AT_rich Low_complexity Low_complexity 1 32 0 5 709 22 35 0 0 chr3R 16281290 16281319 -11623734 + AT_rich Low_complexity Low_complexity 1 29 0 5 709 233 135 19 0 chr3R 16281725 16281777 -11623276 + (CAGC)n Simple_repeat Simple_repeat 2 54 0 5 709 21 0 0 0 chr3R 16282240 16282261 -11622792 + AT_rich Low_complexity Low_complexity 1 21 0 5 709 286 217 36 12 chr3R 16282646 16282730 -11622323 + (TG)n Simple_repeat Simple_repeat 1 86 0 5 709 21 0 0 0 chr3R 16283691 16283712 -11621341 + AT_rich Low_complexity Low_complexity 1 21 0 5 709 234 62 0 0 chr3R 16285566 16285598 -11619455 + (CAA)n Simple_repeat Simple_repeat 1 32 0 5 709 29 28 0 0 chr3R 16287485 16287521 -11617532 + AT_rich Low_complexity Low_complexity 1 36 0 5 709 189 154 0 0 chr3R 16288154 16288193 -11616860 + A-rich Low_complexity Low_complexity 1 39 0 5 709 21 0 0 0 chr3R 16292504 16292525 -11612528 + AT_rich Low_complexity Low_complexity 1 21 0 5 709 29 28 0 0 chr3R 16292588 16292624 -11612429 + AT_rich Low_complexity Low_complexity 1 36 0 5 709 23 0 0 0 chr3R 16293320 16293343 -11611710 + AT_rich Low_complexity Low_complexity 1 23 0 5 709 42 20 0 0 chr3R 16295214 16295263 -11609790 + AT_rich Low_complexity Low_complexity 1 49 0 5 709 23 33 0 0 chr3R 16295341 16295371 -11609682 + AT_rich Low_complexity Low_complexity 1 30 0 5 709 234 105 0 0 chr3R 16298051 16298089 -11606964 + (A)n Simple_repeat Simple_repeat 1 38 0 5 709 267 164 0 0 chr3R 16301633 16301694 -11603359 + (TG)n Simple_repeat Simple_repeat 1 61 0 5 709 240 122 0 0 chr3R 16301898 16301939 -11603114 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 709 186 43 0 0 chr3R 16303001 16303024 -11602029 + (CTAA)n Simple_repeat Simple_repeat 2 24 0 5 709 27 100 0 0 chr3R 16303024 16303114 -11601939 + AT_rich Low_complexity Low_complexity 1 90 0 5 709 450 182 0 0 chr3R 16303414 16303524 -11601529 + (CAGT)n Simple_repeat Simple_repeat 2 111 0 5 709 231 103 0 0 chr3R 16304408 16304447 -11600606 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 709 23 0 0 0 chr3R 16305925 16305948 -11599105 + AT_rich Low_complexity Low_complexity 1 23 0 5 709 183 162 0 0 chr3R 16310072 16310109 -11594944 + CT-rich Low_complexity Low_complexity 1 37 0 5 709 24 32 0 0 chr3R 16312496 16312527 -11592526 + AT_rich Low_complexity Low_complexity 1 31 0 5 709 225 65 0 0 chr3R 16315066 16315097 -11589956 + (CGTTG)n Simple_repeat Simple_repeat 5 35 0 5 709 22 0 0 0 chr3R 16316580 16316602 -11588451 + AT_rich Low_complexity Low_complexity 1 22 0 5 709 30 0 0 0 chr3R 16317156 16317186 -11587867 + AT_rich Low_complexity Low_complexity 1 30 0 5 709 24 0 0 0 chr3R 16320819 16320843 -11584210 + AT_rich Low_complexity Low_complexity 1 24 0 5 709 245 133 43 43 chr3R 16321405 16321452 -11583601 - DNAREP1_DM LINE Penelope -238 356 310 5 709 22 35 0 0 chr3R 16322654 16322683 -11582370 + AT_rich Low_complexity Low_complexity 1 29 0 5 709 22 0 0 0 chr3R 16324823 16324845 -11580208 + AT_rich Low_complexity Low_complexity 1 22 0 5 709 239 184 0 0 chr3R 16326400 16326438 -11578615 + DNAREP1_DM LINE Penelope 1 38 -556 5 709 25 31 0 0 chr3R 16326465 16326497 -11578556 + AT_rich Low_complexity Low_complexity 1 32 0 5 709 33 43 0 0 chr3R 16327825 16327872 -11577181 + AT_rich Low_complexity Low_complexity 1 47 0 5 709 26 30 0 0 chr3R 16332138 16332171 -11572882 + AT_rich Low_complexity Low_complexity 1 33 0 5 709 6784 9 5 0 chr3R 16332362 16333108 -11571945 + BS LINE Jockey 4375 5124 -2 5 709 21 0 0 0 chr3R 16337429 16337450 -11567603 + AT_rich Low_complexity Low_complexity 1 21 0 5 709 4792 4 0 0 chr3R 16338780 16339298 -11565755 + NOMAD_LTR LTR Gypsy 1 518 0 5 709 7072 0 4 0 chr3R 16339298 16340063 -11564990 + NOMAD_I LTR Gypsy 1 768 -5804 5 709 7944 0 0 1 chr3R 16340056 16340908 -11564145 + NOMAD_I LTR Gypsy 5722 6572 0 5 709 4792 4 0 0 chr3R 16340908 16341426 -11563627 + NOMAD_LTR LTR Gypsy 1 518 0 5 709 27 0 0 0 chr3R 16342441 16342468 -11562585 + AT_rich Low_complexity Low_complexity 1 27 0 5 709 212 159 0 43 chr3R 16344957 16345003 -11560050 + (CAGA)n Simple_repeat Simple_repeat 1 44 0 5 709 211 93 47 0 chr3R 16345450 16345493 -11559560 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 709 288 148 0 0 chr3R 16350795 16350856 -11554197 + (GATTG)n Simple_repeat Simple_repeat 4 64 0 5 709 217 219 0 0 chr3R 16352771 16352812 -11552241 + (CCCA)n Simple_repeat Simple_repeat 2 42 0 5 709 26 30 0 0 chr3R 16355114 16355147 -11549906 + AT_rich Low_complexity Low_complexity 1 33 0 5 709 24 0 0 0 chr3R 16356315 16356339 -11548714 + AT_rich Low_complexity Low_complexity 1 24 0 5 709 24 32 0 0 chr3R 16362025 16362056 -11542997 + AT_rich Low_complexity Low_complexity 1 31 0 5 709 203 189 0 0 chr3R 16362434 16362471 -11542582 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 709 23 0 0 0 chr3R 16370923 16370946 -11534107 + AT_rich Low_complexity Low_complexity 1 23 0 5 709 26 30 0 0 chr3R 16371014 16371047 -11534006 + AT_rich Low_complexity Low_complexity 1 33 0 5 709 347 169 0 30 chr3R 16373228 16373295 -11531758 + DNAREP1_DM LINE Penelope 368 432 -162 5 709 23 54 0 0 chr3R 16374550 16374587 -11530466 + AT_rich Low_complexity Low_complexity 1 37 0 5 709 22 35 0 0 chr3R 16375962 16375991 -11529062 + AT_rich Low_complexity Low_complexity 1 29 0 5 709 254 308 13 0 chr3R 16381673 16381751 -11523302 + (TATG)n Simple_repeat Simple_repeat 1 79 0 5 709 31 58 0 0 chr3R 16383672 16383724 -11521329 + AT_rich Low_complexity Low_complexity 1 52 0 5 710 264 212 15 0 chr3R 16386782 16386848 -11518205 + ROO_I LTR Pao 702 768 -7488 5 710 213 154 0 0 chr3R 16391569 16391608 -11513445 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 5 710 22 0 0 0 chr3R 16394023 16394045 -11511008 + AT_rich Low_complexity Low_complexity 1 22 0 5 710 186 167 0 0 chr3R 16394839 16394875 -11510178 + (CATA)n Simple_repeat Simple_repeat 2 37 0 5 710 26 50 0 0 chr3R 16396718 16396758 -11508295 + AT_rich Low_complexity Low_complexity 1 40 0 5 710 31 58 0 0 chr3R 16401712 16401764 -11503289 + AT_rich Low_complexity Low_complexity 1 52 0 5 710 39 60 0 0 chr3R 16403785 16403852 -11501201 + AT_rich Low_complexity Low_complexity 1 67 0 5 710 287 250 0 0 chr3R 16409379 16409467 -11495586 + (TTG)n Simple_repeat Simple_repeat 1 88 0 5 710 234 136 0 0 chr3R 16409472 16409516 -11495537 + (TGG)n Simple_repeat Simple_repeat 3 46 0 5 710 22 56 0 0 chr3R 16414336 16414372 -11490681 + AT_rich Low_complexity Low_complexity 1 36 0 5 710 21 36 0 0 chr3R 16418598 16418626 -11486427 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 22 35 0 0 chr3R 16420750 16420779 -11484274 + AT_rich Low_complexity Low_complexity 1 29 0 5 710 21 36 0 0 chr3R 16421951 16421979 -11483074 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 860 245 152 26 chr3R 16427701 16427880 -11477173 - DNAREP1_DM LINE Penelope -38 556 357 5 710 243 122 0 0 chr3R 16427880 16427929 -11477124 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 5 710 860 245 152 26 chr3R 16427929 16428130 -11476923 - DNAREP1_DM LINE Penelope -238 356 128 5 710 276 263 0 38 chr3R 16429737 16429816 -11475237 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 5 710 21 36 0 0 chr3R 16433404 16433432 -11471621 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 25 0 0 0 chr3R 16436072 16436097 -11468956 + AT_rich Low_complexity Low_complexity 1 25 0 5 710 23 0 0 0 chr3R 16437293 16437316 -11467737 + AT_rich Low_complexity Low_complexity 1 23 0 5 710 198 118 0 0 chr3R 16437729 16437763 -11467290 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 710 328 174 82 52 chr3R 16438892 16438989 -11466064 + DNAREP1_DM LINE Penelope 367 466 -128 5 710 39 0 0 0 chr3R 16441927 16441966 -11463087 + AT_rich Low_complexity Low_complexity 1 39 0 5 710 200 114 22 43 chr3R 16443108 16443154 -11461899 + A-rich Low_complexity Low_complexity 2 46 0 5 710 263 148 0 36 chr3R 16444871 16444955 -11460098 + ROO_I LTR Pao 653 733 -7523 5 710 24 0 0 0 chr3R 16446962 16446986 -11458067 + AT_rich Low_complexity Low_complexity 1 24 0 5 710 23 0 0 0 chr3R 16447711 16447734 -11457319 + AT_rich Low_complexity Low_complexity 1 23 0 5 710 260 199 17 69 chr3R 16448339 16448500 -11456553 + ROO_I LTR Pao 643 743 -7513 5 710 232 188 21 0 chr3R 16451735 16451783 -11453270 + (CAG)n Simple_repeat Simple_repeat 2 50 0 5 710 21 36 0 0 chr3R 16453861 16453889 -11451164 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 25 31 0 0 chr3R 16454527 16454559 -11450494 + AT_rich Low_complexity Low_complexity 1 32 0 5 710 29 0 0 0 chr3R 16460615 16460644 -11444409 + AT_rich Low_complexity Low_complexity 1 29 0 5 710 28 0 0 0 chr3R 16460961 16460989 -11444064 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 33 0 0 0 chr3R 16470073 16470106 -11434947 + AT_rich Low_complexity Low_complexity 1 33 0 5 710 25 31 0 0 chr3R 16473543 16473575 -11431478 + AT_rich Low_complexity Low_complexity 1 32 0 5 710 201 39 0 0 chr3R 16474344 16474370 -11430683 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 710 24 53 0 0 chr3R 16474709 16474747 -11430306 + AT_rich Low_complexity Low_complexity 1 38 0 5 710 22 35 0 0 chr3R 16476886 16476915 -11428138 + AT_rich Low_complexity Low_complexity 1 29 0 5 710 233 169 12 35 chr3R 16482610 16482696 -11422357 + (CAG)n Simple_repeat Simple_repeat 2 85 0 5 710 23 33 0 0 chr3R 16485631 16485661 -11419392 + AT_rich Low_complexity Low_complexity 1 30 0 5 710 300 181 265 0 chr3R 16485773 16485856 -11419197 + DNAREP1_DM LINE Penelope 468 572 -22 5 710 218 191 0 0 chr3R 16491190 16491237 -11413816 + (CATATA)n Simple_repeat Simple_repeat 1 47 0 5 710 186 43 0 0 chr3R 16491356 16491379 -11413674 + (AATTG)n Simple_repeat Simple_repeat 3 25 0 5 710 30 45 0 0 chr3R 16494034 16494078 -11410975 + AT_rich Low_complexity Low_complexity 1 44 0 5 710 41 0 0 0 chr3R 16496729 16496770 -11408283 + AT_rich Low_complexity Low_complexity 1 41 0 5 710 21 57 0 0 chr3R 16498709 16498744 -11406309 + AT_rich Low_complexity Low_complexity 1 35 0 5 710 21 36 0 0 chr3R 16500978 16501006 -11404047 + AT_rich Low_complexity Low_complexity 1 28 0 5 710 213 196 0 0 chr3R 16502451 16502507 -11402546 + (CCG)n Simple_repeat Simple_repeat 2 57 0 5 710 36 40 0 0 chr3R 16503437 16503487 -11401566 + AT_rich Low_complexity Low_complexity 1 50 0 5 710 22 56 0 0 chr3R 16504808 16504844 -11400209 + AT_rich Low_complexity Low_complexity 1 36 0 5 710 21 57 0 0 chr3R 16509906 16509941 -11395112 + AT_rich Low_complexity Low_complexity 1 35 0 5 711 23 0 0 0 chr3R 16521748 16521771 -11383282 + AT_rich Low_complexity Low_complexity 1 23 0 5 711 240 35 0 0 chr3R 16523884 16523913 -11381140 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 711 351 0 0 0 chr3R 16524588 16524627 -11380426 + (AGTAG)n Simple_repeat Simple_repeat 4 42 0 5 711 210 150 0 0 chr3R 16525046 16525086 -11379967 + (AATTG)n Simple_repeat Simple_repeat 3 42 0 5 711 23 54 0 0 chr3R 16531404 16531441 -11373612 + AT_rich Low_complexity Low_complexity 1 37 0 5 711 24 0 0 0 chr3R 16531496 16531520 -11373533 + AT_rich Low_complexity Low_complexity 1 24 0 5 711 278 182 0 15 chr3R 16532957 16533024 -11372029 + (CCGAA)n Simple_repeat Simple_repeat 5 70 0 5 711 211 200 0 0 chr3R 16537026 16537066 -11367987 + T-rich Low_complexity Low_complexity 3 42 0 5 711 25 65 0 0 chr3R 16537562 16537608 -11367445 + AT_rich Low_complexity Low_complexity 1 46 0 5 711 212 59 29 0 chr3R 16538351 16538385 -11366668 + (TAAAAA)n Simple_repeat Simple_repeat 2 36 0 5 711 216 67 0 0 chr3R 16542054 16542084 -11362969 + (CAGTT)n Simple_repeat Simple_repeat 4 33 0 5 711 23 33 0 0 chr3R 16545121 16545151 -11359902 + AT_rich Low_complexity Low_complexity 1 30 0 5 711 24 0 0 0 chr3R 16554569 16554593 -11350460 + AT_rich Low_complexity Low_complexity 1 24 0 5 711 30 27 0 0 chr3R 16556926 16556963 -11348090 + AT_rich Low_complexity Low_complexity 1 37 0 5 711 24 0 0 0 chr3R 16561169 16561193 -11343860 + AT_rich Low_complexity Low_complexity 1 24 0 5 711 26 0 0 0 chr3R 16565392 16565418 -11339635 + AT_rich Low_complexity Low_complexity 1 26 0 5 711 183 162 0 0 chr3R 16566105 16566142 -11338911 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 711 23 0 0 0 chr3R 16566858 16566881 -11338172 + AT_rich Low_complexity Low_complexity 1 23 0 5 711 26 30 0 0 chr3R 16569672 16569705 -11335348 + AT_rich Low_complexity Low_complexity 1 33 0 5 711 27 0 0 0 chr3R 16571378 16571405 -11333648 + AT_rich Low_complexity Low_complexity 1 27 0 5 711 222 37 0 0 chr3R 16571993 16572020 -11333033 + (TTGG)n Simple_repeat Simple_repeat 1 27 0 5 711 24 0 0 0 chr3R 16576371 16576395 -11328658 + AT_rich Low_complexity Low_complexity 1 24 0 5 711 201 331 0 16 chr3R 16576811 16576937 -11328116 + (TA)n Simple_repeat Simple_repeat 2 125 0 5 711 180 77 0 0 chr3R 16578371 16578397 -11326656 + (GTTTG)n Simple_repeat Simple_repeat 1 26 0 5 711 204 40 0 0 chr3R 16579016 16579041 -11326012 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 711 225 0 0 0 chr3R 16579363 16579388 -11325665 + (A)n Simple_repeat Simple_repeat 1 25 0 5 711 373 264 0 0 chr3R 16580861 16580986 -11324067 + (CAG)n Simple_repeat Simple_repeat 1 125 0 5 711 213 108 0 0 chr3R 16584046 16584083 -11320970 + (CTG)n Simple_repeat Simple_repeat 2 38 0 5 711 27 81 0 0 chr3R 16588860 16588922 -11316131 + AT_rich Low_complexity Low_complexity 1 62 0 5 711 22 56 0 0 chr3R 16589914 16589950 -11315103 + AT_rich Low_complexity Low_complexity 1 36 0 5 711 205 200 50 0 chr3R 16591212 16591272 -11313781 + A-rich Low_complexity Low_complexity 2 64 0 5 711 192 40 0 0 chr3R 16591382 16591407 -11313646 + (TCG)n Simple_repeat Simple_repeat 1 25 0 5 711 218 32 0 31 chr3R 16592579 16592611 -11312442 + (CAGAC)n Simple_repeat Simple_repeat 5 35 0 5 711 21 0 0 0 chr3R 16593565 16593586 -11311467 + AT_rich Low_complexity Low_complexity 1 21 0 5 711 24 0 0 0 chr3R 16595856 16595880 -11309173 + AT_rich Low_complexity Low_complexity 1 24 0 5 711 261 0 0 0 chr3R 16596217 16596246 -11308807 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 711 245 53 0 50 chr3R 16597177 16597217 -11307836 + (TATATG)n Simple_repeat Simple_repeat 4 41 0 5 711 22 70 0 0 chr3R 16597235 16597278 -11307775 + AT_rich Low_complexity Low_complexity 1 43 0 5 711 26 93 0 0 chr3R 16597432 16597507 -11307546 + AT_rich Low_complexity Low_complexity 1 75 0 5 711 24 0 0 0 chr3R 16599554 16599578 -11305475 + AT_rich Low_complexity Low_complexity 1 24 0 5 711 180 125 0 0 chr3R 16601071 16601103 -11303950 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 711 246 105 0 0 chr3R 16601278 16601316 -11303737 + (ATGGTG)n Simple_repeat Simple_repeat 1 38 0 5 711 22 35 0 0 chr3R 16602120 16602149 -11302904 + AT_rich Low_complexity Low_complexity 1 29 0 5 711 223 203 17 17 chr3R 16605310 16605370 -11299683 + A-rich Low_complexity Low_complexity 3 62 0 5 711 192 77 0 0 chr3R 16606442 16606468 -11298585 + (CAT)n Simple_repeat Simple_repeat 1 26 0 5 711 22 0 0 0 chr3R 16606849 16606871 -11298182 + AT_rich Low_complexity Low_complexity 1 22 0 5 711 36 0 0 0 chr3R 16608077 16608113 -11296940 + AT_rich Low_complexity Low_complexity 1 36 0 5 711 180 0 0 0 chr3R 16608365 16608385 -11296668 + (GA)n Simple_repeat Simple_repeat 2 21 0 5 711 22 0 0 0 chr3R 16609541 16609563 -11295490 + AT_rich Low_complexity Low_complexity 1 22 0 5 711 180 125 0 0 chr3R 16609732 16609764 -11295289 + (AAATG)n Simple_repeat Simple_repeat 1 32 0 5 711 183 42 0 0 chr3R 16609997 16610021 -11295032 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 711 211 244 38 25 chr3R 16611515 16611595 -11293458 + (CATGC)n Simple_repeat Simple_repeat 3 83 0 5 711 197 132 0 26 chr3R 16612705 16612744 -11292309 + (TCCG)n Simple_repeat Simple_repeat 4 41 0 5 711 198 71 0 0 chr3R 16614602 16614630 -11290423 + (T)n Simple_repeat Simple_repeat 1 28 0 5 711 195 69 0 0 chr3R 16616306 16616335 -11288718 + (T)n Simple_repeat Simple_repeat 1 29 0 5 711 266 206 47 16 chr3R 16616437 16616501 -11288552 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 5 711 25 75 0 0 chr3R 16617399 16617452 -11287601 + AT_rich Low_complexity Low_complexity 1 53 0 5 711 186 43 0 0 chr3R 16618316 16618339 -11286714 + (CAGCC)n Simple_repeat Simple_repeat 5 27 0 5 711 28 0 0 0 chr3R 16619358 16619386 -11285667 + AT_rich Low_complexity Low_complexity 1 28 0 5 711 198 0 0 0 chr3R 16621072 16621094 -11283959 + (A)n Simple_repeat Simple_repeat 1 22 0 5 711 210 37 0 0 chr3R 16623832 16623859 -11281194 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 5 711 193 135 39 0 chr3R 16624418 16624470 -11280583 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 711 21 0 0 0 chr3R 16626654 16626675 -11278378 + AT_rich Low_complexity Low_complexity 1 21 0 5 711 25 0 0 0 chr3R 16626735 16626760 -11278293 + AT_rich Low_complexity Low_complexity 1 25 0 5 711 248 120 0 20 chr3R 16627845 16627896 -11277157 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 711 251 222 0 12 chr3R 16627924 16628006 -11277047 + (ATG)n Simple_repeat Simple_repeat 1 81 0 5 711 211 93 23 23 chr3R 16628106 16628150 -11276903 + (CGG)n Simple_repeat Simple_repeat 2 45 0 5 711 239 200 0 71 chr3R 16628338 16628451 -11276602 + A-rich Low_complexity Low_complexity 4 108 0 5 711 241 177 12 60 chr3R 16628360 16628444 -11276609 + (CAAAT)n Simple_repeat Simple_repeat 2 81 0 5 711 27 29 0 0 chr3R 16629692 16629726 -11275327 + AT_rich Low_complexity Low_complexity 1 34 0 5 711 207 0 0 0 chr3R 16631048 16631071 -11273982 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 711 225 139 0 0 chr3R 16631884 16631927 -11273126 + (CAA)n Simple_repeat Simple_repeat 2 44 0 5 711 30 59 0 0 chr3R 16633715 16633766 -11271287 + AT_rich Low_complexity Low_complexity 1 51 0 5 711 231 191 31 31 chr3R 16633957 16634022 -11271031 + A-rich Low_complexity Low_complexity 1 65 0 5 711 222 128 0 0 chr3R 16634137 16634176 -11270877 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 711 26 0 0 0 chr3R 16634596 16634622 -11270431 + AT_rich Low_complexity Low_complexity 1 26 0 5 711 200 200 25 0 chr3R 16635223 16635263 -11269790 + (CAA)n Simple_repeat Simple_repeat 2 42 0 5 711 257 206 14 14 chr3R 16635476 16635550 -11269503 + (TA)n Simple_repeat Simple_repeat 1 74 0 5 711 25 0 0 0 chr3R 16635598 16635623 -11269430 + AT_rich Low_complexity Low_complexity 1 25 0 5 711 21 0 0 0 chr3R 16636238 16636259 -11268794 + AT_rich Low_complexity Low_complexity 1 21 0 5 711 26 0 0 0 chr3R 16640136 16640162 -11264891 + AT_rich Low_complexity Low_complexity 1 26 0 5 711 411 106 0 0 chr3R 16645925 16645991 -11259062 + (CTG)n Simple_repeat Simple_repeat 2 67 0 5 712 317 250 0 0 chr3R 16646935 16647023 -11258030 + (CTG)n Simple_repeat Simple_repeat 3 90 0 5 712 215 293 0 0 chr3R 16647185 16647267 -11257786 + (CTG)n Simple_repeat Simple_repeat 3 84 0 5 712 23 0 0 0 chr3R 16655289 16655312 -11249741 + AT_rich Low_complexity Low_complexity 1 23 0 5 712 26 0 0 0 chr3R 16656441 16656467 -11248586 + AT_rich Low_complexity Low_complexity 1 26 0 5 712 22 0 0 0 chr3R 16656622 16656644 -11248409 + AT_rich Low_complexity Low_complexity 1 22 0 5 712 202 234 21 0 chr3R 16659067 16659114 -11245939 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 712 23 86 0 0 chr3R 16660391 16660449 -11244604 + AT_rich Low_complexity Low_complexity 1 58 0 5 712 29 0 0 0 chr3R 16663698 16663727 -11241326 + AT_rich Low_complexity Low_complexity 1 29 0 5 712 232 276 0 0 chr3R 16664527 16664585 -11240468 + (CGG)n Simple_repeat Simple_repeat 1 58 0 5 712 209 184 0 0 chr3R 16665373 16665411 -11239642 + (CCAA)n Simple_repeat Simple_repeat 3 40 0 5 712 601 212 20 14 chr3R 16666106 16666254 -11238799 - DNAREP1_DM LINE Penelope -83 511 363 5 712 22 35 0 0 chr3R 16667348 16667377 -11237676 + AT_rich Low_complexity Low_complexity 1 29 0 5 712 21 0 0 0 chr3R 16667428 16667449 -11237604 + AT_rich Low_complexity Low_complexity 1 21 0 5 712 945 248 155 0 chr3R 16671012 16671334 -11233719 - DMCR1A LINE CR1 -1234 3236 2865 5 712 215 227 0 0 chr3R 16672011 16672055 -11232998 + (GAATG)n Simple_repeat Simple_repeat 5 48 0 5 712 25 0 0 0 chr3R 16674347 16674372 -11230681 + AT_rich Low_complexity Low_complexity 1 25 0 5 712 29 28 0 0 chr3R 16675899 16675935 -11229118 + AT_rich Low_complexity Low_complexity 1 36 0 5 712 189 74 0 0 chr3R 16676948 16676975 -11228078 + (GAA)n Simple_repeat Simple_repeat 3 29 0 5 712 24 67 0 0 chr3R 16680150 16680195 -11224858 + AT_rich Low_complexity Low_complexity 1 45 0 5 712 43654 0 0 0 chr3R 16680267 16684987 -11220066 + DOC LINE Jockey 4 4723 -2 5 712 281 207 11 0 chr3R 16686385 16686472 -11218581 + (TA)n Simple_repeat Simple_repeat 1 88 0 5 712 22 0 0 0 chr3R 16696494 16696516 -11208537 + AT_rich Low_complexity Low_complexity 1 22 0 5 712 21 36 0 0 chr3R 16697383 16697411 -11207642 + AT_rich Low_complexity Low_complexity 1 28 0 5 712 23 33 0 0 chr3R 16697770 16697800 -11207253 + AT_rich Low_complexity Low_complexity 1 30 0 5 712 399 250 61 61 chr3R 16697872 16698004 -11207049 - DNAREP1_DM LINE Penelope -96 498 367 5 712 198 167 0 0 chr3R 16701739 16701775 -11203278 + (CCGAG)n Simple_repeat Simple_repeat 1 36 0 5 712 22 0 0 0 chr3R 16703235 16703257 -11201796 + AT_rich Low_complexity Low_complexity 1 22 0 5 712 213 180 0 0 chr3R 16706137 16706187 -11198866 + (CACCAT)n Simple_repeat Simple_repeat 6 55 0 5 712 243 88 0 0 chr3R 16707264 16707298 -11197755 + (CATA)n Simple_repeat Simple_repeat 2 35 0 5 712 21 0 0 0 chr3R 16709211 16709232 -11195821 + AT_rich Low_complexity Low_complexity 1 21 0 5 712 26 64 0 0 chr3R 16713342 16713389 -11191664 + AT_rich Low_complexity Low_complexity 1 47 0 5 712 203 152 0 0 chr3R 16713842 16713875 -11191178 + (ACTG)n Simple_repeat Simple_repeat 3 35 0 5 712 24 32 0 0 chr3R 16715473 16715504 -11189549 + AT_rich Low_complexity Low_complexity 1 31 0 5 712 21 0 0 0 chr3R 16715546 16715567 -11189486 + AT_rich Low_complexity Low_complexity 1 21 0 5 712 22 0 0 0 chr3R 16716242 16716264 -11188789 + AT_rich Low_complexity Low_complexity 1 22 0 5 712 21 0 0 0 chr3R 16716630 16716651 -11188402 + AT_rich Low_complexity Low_complexity 1 21 0 5 712 21 57 0 0 chr3R 16717455 16717490 -11187563 + AT_rich Low_complexity Low_complexity 1 35 0 5 712 253 208 39 68 chr3R 16719009 16719112 -11185941 - DNAREP1_DM LINE Penelope -18 576 477 5 712 200 208 0 0 chr3R 16720459 16720507 -11184546 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 712 23 0 0 0 chr3R 16724287 16724310 -11180743 + AT_rich Low_complexity Low_complexity 1 23 0 5 712 236 30 30 0 chr3R 16724721 16724754 -11180299 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 712 222 80 0 57 chr3R 16725615 16725668 -11179385 + (TAAAAA)n Simple_repeat Simple_repeat 3 52 0 5 712 22 35 0 0 chr3R 16726423 16726452 -11178601 + AT_rich Low_complexity Low_complexity 1 29 0 5 712 21 82 0 0 chr3R 16729492 16729541 -11175512 + AT_rich Low_complexity Low_complexity 1 49 0 5 712 44 0 0 0 chr3R 16731778 16731822 -11173231 + AT_rich Low_complexity Low_complexity 1 44 0 5 712 1055 205 74 18 chr3R 16733924 16734207 -11170846 + DNAREP1_DM LINE Penelope 1 299 -295 5 712 27 0 0 0 chr3R 16735699 16735726 -11169327 + AT_rich Low_complexity Low_complexity 1 27 0 5 712 216 97 0 0 chr3R 16735825 16735856 -11169197 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 712 202 139 28 0 chr3R 16737180 16737216 -11167837 + (TTAG)n Simple_repeat Simple_repeat 4 40 0 5 712 30 69 0 0 chr3R 16739073 16739131 -11165922 + AT_rich Low_complexity Low_complexity 1 58 0 5 712 258 219 24 30 chr3R 16740072 16740182 -11164871 + A-rich Low_complexity Low_complexity 1 109 0 5 712 21 57 0 0 chr3R 16740660 16740695 -11164358 + AT_rich Low_complexity Low_complexity 1 35 0 5 712 22 0 0 0 chr3R 16742994 16743016 -11162037 + AT_rich Low_complexity Low_complexity 1 22 0 5 712 21 0 0 0 chr3R 16745777 16745798 -11159255 + AT_rich Low_complexity Low_complexity 1 21 0 5 712 200 135 0 26 chr3R 16751158 16751196 -11153857 + A-rich Low_complexity Low_complexity 2 38 0 5 712 262 220 0 0 chr3R 16753516 16753566 -11151487 - DNAREP1_DM LINE Penelope -542 52 3 5 712 300 119 0 0 chr3R 16756130 16756189 -11148864 + (CTG)n Simple_repeat Simple_repeat 3 61 0 5 712 22 56 0 0 chr3R 16756784 16756820 -11148233 + AT_rich Low_complexity Low_complexity 1 36 0 5 712 232 208 38 0 chr3R 16757849 16757902 -11147151 + (CAGC)n Simple_repeat Simple_repeat 3 57 0 5 712 203 173 19 0 chr3R 16758708 16758760 -11146293 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 712 202 135 27 0 chr3R 16759033 16759070 -11145983 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 712 26 50 0 0 chr3R 16759434 16759474 -11145579 + AT_rich Low_complexity Low_complexity 1 40 0 5 712 309 151 0 0 chr3R 16761011 16761064 -11143989 + (ATG)n Simple_repeat Simple_repeat 3 55 0 5 712 27 0 0 0 chr3R 16761731 16761758 -11143295 + AT_rich Low_complexity Low_complexity 1 27 0 5 712 344 156 62 38 chr3R 16763731 16763811 -11141242 - DNAREP1_DM LINE Penelope 0 594 513 5 712 183 186 0 0 chr3R 16765008 16765051 -11140002 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 712 21 0 0 0 chr3R 16765445 16765466 -11139587 + AT_rich Low_complexity Low_complexity 1 21 0 5 712 180 167 0 0 chr3R 16766335 16766383 -11138670 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 712 231 36 0 0 chr3R 16767402 16767430 -11137623 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 712 22 35 0 0 chr3R 16768540 16768569 -11136484 + AT_rich Low_complexity Low_complexity 1 29 0 5 712 271 180 101 0 chr3R 16771105 16771194 -11133859 - ROO_I LTR Pao -7513 743 646 5 712 200 217 0 0 chr3R 16772117 16772163 -11132890 + T-rich Low_complexity Low_complexity 1 46 0 5 712 216 288 0 0 chr3R 16774771 16774830 -11130223 + (CTG)n Simple_repeat Simple_repeat 1 59 0 5 712 330 123 0 0 chr3R 16775058 16775115 -11129938 + (TC)n Simple_repeat Simple_repeat 1 57 0 5 712 40 21 0 0 chr3R 16775882 16775929 -11129124 + AT_rich Low_complexity Low_complexity 1 47 0 5 713 25 0 0 0 chr3R 16778167 16778192 -11126861 + AT_rich Low_complexity Low_complexity 1 25 0 5 713 183 42 0 0 chr3R 16778333 16778357 -11126696 + (A)n Simple_repeat Simple_repeat 1 24 0 5 713 180 0 0 0 chr3R 16780561 16780581 -11124472 + (T)n Simple_repeat Simple_repeat 1 20 0 5 713 209 200 0 0 chr3R 16782713 16782758 -11122295 + CT-rich Low_complexity Low_complexity 2 46 0 5 713 217 254 0 0 chr3R 16783884 16783939 -11121114 + A-rich Low_complexity Low_complexity 1 55 0 5 713 23 0 0 0 chr3R 16785448 16785471 -11119582 + AT_rich Low_complexity Low_complexity 1 23 0 5 713 246 160 20 20 chr3R 16787872 16787923 -11117130 + (CCCGAA)n Simple_repeat Simple_repeat 6 56 0 5 713 191 61 30 0 chr3R 16792958 16792991 -11112062 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 713 194 119 0 45 chr3R 16794259 16794303 -11110750 + (CCAA)n Simple_repeat Simple_repeat 1 42 0 5 713 219 88 0 0 chr3R 16795361 16795395 -11109658 + (TC)n Simple_repeat Simple_repeat 2 35 0 5 713 28 48 0 0 chr3R 16796406 16796448 -11108605 + AT_rich Low_complexity Low_complexity 1 42 0 5 713 224 231 13 0 chr3R 16799799 16799877 -11105176 + (CAA)n Simple_repeat Simple_repeat 3 81 0 5 713 34 0 0 0 chr3R 16799898 16799932 -11105121 + AT_rich Low_complexity Low_complexity 1 34 0 5 713 212 227 30 0 chr3R 16799996 16800062 -11104991 + A-rich Low_complexity Low_complexity 3 70 0 5 713 215 232 40 20 chr3R 16800047 16800148 -11104905 + (CAA)n Simple_repeat Simple_repeat 2 104 0 5 713 294 115 0 0 chr3R 16800229 16800281 -11104772 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 713 240 169 0 63 chr3R 16800957 16801020 -11104033 + A-rich Low_complexity Low_complexity 2 60 0 5 713 248 70 0 23 chr3R 16801151 16801195 -11103858 + (CAAAAA)n Simple_repeat Simple_repeat 3 45 0 5 713 23 78 0 0 chr3R 16802910 16802961 -11102092 + AT_rich Low_complexity Low_complexity 1 51 0 5 713 32 0 0 0 chr3R 16803229 16803261 -11101792 + AT_rich Low_complexity Low_complexity 1 32 0 5 713 204 184 0 0 chr3R 16803976 16804025 -11101028 + (CAA)n Simple_repeat Simple_repeat 3 51 0 5 713 278 234 36 9 chr3R 16810618 16810730 -11094323 + (CA)n Simple_repeat Simple_repeat 2 116 0 5 713 279 283 21 32 chr3R 16815617 16815712 -11089341 - DNAREP1_DM LINE Penelope -495 99 6 5 713 192 158 0 50 chr3R 16818117 16818177 -11086876 + (CAG)n Simple_repeat Simple_repeat 3 59 0 5 713 21 0 0 0 chr3R 16823672 16823693 -11081360 + AT_rich Low_complexity Low_complexity 1 21 0 5 713 389 181 0 0 chr3R 16826356 16826428 -11078625 - DNAREP1_DM LINE Penelope 0 594 523 5 713 28 0 0 0 chr3R 16826462 16826490 -11078563 + AT_rich Low_complexity Low_complexity 1 28 0 5 713 234 136 0 0 chr3R 16835761 16835805 -11069248 + (ATCTG)n Simple_repeat Simple_repeat 3 46 0 5 713 27 49 0 0 chr3R 16840152 16840193 -11064860 + AT_rich Low_complexity Low_complexity 1 41 0 5 713 219 69 0 0 chr3R 16842054 16842083 -11062970 + (CAG)n Simple_repeat Simple_repeat 1 29 0 5 713 186 43 0 0 chr3R 16842804 16842827 -11062226 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 713 42 36 0 0 chr3R 16843110 16843166 -11061887 + AT_rich Low_complexity Low_complexity 1 56 0 5 713 247 127 32 0 chr3R 16843166 16843229 -11061824 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 713 301 161 54 0 chr3R 16843255 16843311 -11061742 - DNAREP1_DM LINE Penelope -535 59 1 5 713 362 273 0 24 chr3R 16843984 16844108 -11060945 + GA-rich Low_complexity Low_complexity 5 125 0 5 713 30 0 0 0 chr3R 16846773 16846803 -11058250 + AT_rich Low_complexity Low_complexity 1 30 0 5 713 207 281 0 0 chr3R 16850028 16850092 -11054961 + A-rich Low_complexity Low_complexity 1 64 0 5 713 21 0 0 0 chr3R 16859241 16859262 -11045791 + AT_rich Low_complexity Low_complexity 1 21 0 5 713 25 31 0 0 chr3R 16868582 16868614 -11036439 + AT_rich Low_complexity Low_complexity 1 32 0 5 713 23 0 0 0 chr3R 16870585 16870608 -11034445 + AT_rich Low_complexity Low_complexity 1 23 0 5 713 189 0 0 0 chr3R 16872608 16872629 -11032424 + (T)n Simple_repeat Simple_repeat 1 21 0 5 713 23 0 0 0 chr3R 16875660 16875683 -11029370 + AT_rich Low_complexity Low_complexity 1 23 0 5 713 23 54 0 0 chr3R 16878751 16878788 -11026265 + AT_rich Low_complexity Low_complexity 1 37 0 5 713 22 56 0 0 chr3R 16880178 16880214 -11024839 + AT_rich Low_complexity Low_complexity 1 36 0 5 713 198 143 0 0 chr3R 16886579 16886614 -11018439 + (GA)n Simple_repeat Simple_repeat 1 35 0 5 713 24 67 0 0 chr3R 16890559 16890604 -11014449 + AT_rich Low_complexity Low_complexity 1 45 0 5 713 21 0 0 0 chr3R 16902564 16902585 -11002468 + AT_rich Low_complexity Low_complexity 1 21 0 5 713 180 0 0 0 chr3R 16906738 16906758 -10998295 + (CACTC)n Simple_repeat Simple_repeat 1 20 0 5 714 318 50 0 0 chr3R 16908686 16908726 -10996327 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 714 228 111 0 0 chr3R 16915894 16915930 -10989123 + (CAG)n Simple_repeat Simple_repeat 2 37 0 5 714 204 67 0 0 chr3R 16916426 16916456 -10988597 + (CAGT)n Simple_repeat Simple_repeat 1 30 0 5 714 195 42 0 0 chr3R 16917188 16917212 -10987841 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 714 24 77 0 0 chr3R 16919906 16919958 -10985095 + AT_rich Low_complexity Low_complexity 1 52 0 5 714 180 0 0 0 chr3R 16922217 16922237 -10982816 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 714 244 231 0 37 chr3R 16923017 16923098 -10981955 + (CTG)n Simple_repeat Simple_repeat 2 79 0 5 714 29 0 0 0 chr3R 16923157 16923186 -10981867 + AT_rich Low_complexity Low_complexity 1 29 0 5 714 228 246 0 0 chr3R 16923288 16923345 -10981708 - ROO_I LTR Pao -7524 732 676 5 714 22 0 0 0 chr3R 16927675 16927697 -10977356 + AT_rich Low_complexity Low_complexity 1 22 0 5 714 232 226 0 0 chr3R 16928060 16928113 -10976940 + ROO_I LTR Pao 651 703 -7553 5 714 30 0 0 0 chr3R 16933956 16933986 -10971067 + AT_rich Low_complexity Low_complexity 1 30 0 5 714 26 30 0 0 chr3R 16936592 16936625 -10968428 + AT_rich Low_complexity Low_complexity 1 33 0 5 714 183 80 0 0 chr3R 16939558 16939583 -10965470 + (CACGC)n Simple_repeat Simple_repeat 4 28 0 5 714 206 355 0 0 chr3R 16941145 16941238 -10963815 + (CAG)n Simple_repeat Simple_repeat 2 94 0 5 714 38 51 0 0 chr3R 16941533 16941592 -10963461 + AT_rich Low_complexity Low_complexity 1 59 0 5 714 26 0 0 0 chr3R 16941846 16941872 -10963181 + AT_rich Low_complexity Low_complexity 1 26 0 5 714 273 207 0 0 chr3R 16944683 16944741 -10960312 + DNAREP1_DM LINE Penelope 24 81 -513 5 714 207 133 0 43 chr3R 16946027 16946074 -10958979 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 714 25 31 0 0 chr3R 16947046 16947078 -10957975 + AT_rich Low_complexity Low_complexity 1 32 0 5 714 203 125 0 24 chr3R 16949046 16949087 -10955966 + (TCCG)n Simple_repeat Simple_repeat 2 41 0 5 714 203 61 30 0 chr3R 16951157 16951190 -10953863 + (TTG)n Simple_repeat Simple_repeat 3 36 0 5 714 27 81 0 0 chr3R 16959680 16959742 -10945311 + AT_rich Low_complexity Low_complexity 1 62 0 5 714 3779 7 0 0 chr3R 16967450 16967867 -10937186 - TIRANT_LTR LTR Gypsy 0 417 1 5 714 68113 2 0 1 chr3R 16967867 16975457 -10929596 - TIRANT_I LTR Gypsy 0 7692 1 5 714 3779 7 0 0 chr3R 16975457 16975874 -10929179 - TIRANT_LTR LTR Gypsy 0 417 1 5 714 24 0 0 0 chr3R 16982214 16982238 -10922815 + AT_rich Low_complexity Low_complexity 1 24 0 5 714 29 47 0 0 chr3R 16983621 16983664 -10921389 + AT_rich Low_complexity Low_complexity 1 43 0 5 714 22 56 0 0 chr3R 16994826 16994862 -10910191 + AT_rich Low_complexity Low_complexity 1 36 0 5 714 241 284 7 29 chr3R 16995307 16995445 -10909608 + A-rich Low_complexity Low_complexity 6 140 0 5 714 243 0 0 0 chr3R 16995514 16995541 -10909512 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 5 714 208 143 0 0 chr3R 16997822 16997857 -10907196 + (TTTTG)n Simple_repeat Simple_repeat 4 38 0 5 714 189 0 0 0 chr3R 17001205 17001226 -10903827 + (CAG)n Simple_repeat Simple_repeat 1 21 0 5 714 31 26 0 0 chr3R 17001392 17001430 -10903623 + AT_rich Low_complexity Low_complexity 1 38 0 5 714 270 56 0 0 chr3R 17002245 17002281 -10902772 + (TATAG)n Simple_repeat Simple_repeat 5 40 0 5 714 195 162 0 0 chr3R 17002400 17002437 -10902616 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 714 27 0 0 0 chr3R 17006829 17006856 -10898197 + AT_rich Low_complexity Low_complexity 1 27 0 5 714 23 33 0 0 chr3R 17006991 17007021 -10898032 + AT_rich Low_complexity Low_complexity 1 30 0 5 714 25 65 0 0 chr3R 17007233 17007279 -10897774 + AT_rich Low_complexity Low_complexity 1 46 0 5 714 35 24 0 0 chr3R 17011090 17011132 -10893921 + AT_rich Low_complexity Low_complexity 1 42 0 5 714 207 0 0 0 chr3R 17016551 17016574 -10888479 + (A)n Simple_repeat Simple_repeat 1 23 0 5 714 186 118 0 0 chr3R 17026622 17026656 -10878397 + (CAAAAA)n Simple_repeat Simple_repeat 6 39 0 5 714 213 283 0 29 chr3R 17028389 17028491 -10876562 + GA-rich Low_complexity Low_complexity 2 100 0 5 714 345 173 0 12 chr3R 17031411 17031493 -10873560 + ROO_I LTR Pao 653 733 -7523 5 714 22 0 0 0 chr3R 17035867 17035889 -10869164 + AT_rich Low_complexity Low_complexity 1 22 0 5 714 180 0 0 0 chr3R 17037336 17037356 -10867697 + (TAGA)n Simple_repeat Simple_repeat 2 21 0 5 715 21 36 0 0 chr3R 17039739 17039767 -10865286 + AT_rich Low_complexity Low_complexity 1 28 0 5 715 30 59 0 0 chr3R 17039931 17039982 -10865071 + AT_rich Low_complexity Low_complexity 1 51 0 5 715 22 0 0 0 chr3R 17040311 17040333 -10864720 + AT_rich Low_complexity Low_complexity 1 22 0 5 715 198 192 0 0 chr3R 17043089 17043141 -10861912 + (TCG)n Simple_repeat Simple_repeat 1 52 0 5 715 206 206 0 14 chr3R 17051198 17051272 -10853781 + (CAG)n Simple_repeat Simple_repeat 2 74 0 5 715 279 0 0 0 chr3R 17051602 17051633 -10853420 + (CAA)n Simple_repeat Simple_repeat 2 32 0 5 715 180 152 0 0 chr3R 17052569 17052602 -10852451 + (CAG)n Simple_repeat Simple_repeat 3 35 0 5 715 299 301 8 8 chr3R 17052621 17052745 -10852308 + (CAG)n Simple_repeat Simple_repeat 1 124 0 5 715 186 103 0 0 chr3R 17054001 17054030 -10851023 + (CAG)n Simple_repeat Simple_repeat 1 29 0 5 715 23 0 0 0 chr3R 17059569 17059592 -10845461 + AT_rich Low_complexity Low_complexity 1 23 0 5 715 204 40 0 0 chr3R 17063161 17063186 -10841867 + (AAATG)n Simple_repeat Simple_repeat 2 26 0 5 715 21 0 0 0 chr3R 17064424 17064445 -10840608 + AT_rich Low_complexity Low_complexity 1 21 0 5 715 22 0 0 0 chr3R 17066634 17066656 -10838397 + AT_rich Low_complexity Low_complexity 1 22 0 5 715 405 200 0 62 chr3R 17067341 17067437 -10837616 - DNAREP1_DM LINE Penelope -2 592 503 5 715 30 89 0 0 chr3R 17071066 17071145 -10833908 + AT_rich Low_complexity Low_complexity 1 79 0 5 715 206 245 0 0 chr3R 17074745 17074798 -10830255 + T-rich Low_complexity Low_complexity 1 53 0 5 715 189 0 0 0 chr3R 17076465 17076486 -10828567 + (GTATG)n Simple_repeat Simple_repeat 5 25 0 5 715 24 32 0 0 chr3R 17077692 17077723 -10827330 + AT_rich Low_complexity Low_complexity 1 31 0 5 715 211 233 0 0 chr3R 17079720 17079763 -10825290 + (ATGGTG)n Simple_repeat Simple_repeat 4 46 0 5 715 189 0 0 0 chr3R 17080321 17080342 -10824711 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 5 715 400 150 0 0 chr3R 17080891 17080951 -10824102 - DNAREP1_DM LINE Penelope -534 60 1 5 715 207 0 0 0 chr3R 17082599 17082622 -10822431 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 715 205 75 24 24 chr3R 17084391 17084432 -10820621 + (CAG)n Simple_repeat Simple_repeat 3 43 0 5 715 240 246 0 0 chr3R 17084547 17084612 -10820441 + (CAG)n Simple_repeat Simple_repeat 3 67 0 5 715 257 208 38 0 chr3R 17085020 17085073 -10819980 - DNAREP1_DM LINE Penelope -136 458 404 5 715 24 53 0 0 chr3R 17086926 17086964 -10818089 + AT_rich Low_complexity Low_complexity 1 38 0 5 715 230 204 0 0 chr3R 17087110 17087154 -10817899 - DNAREP1_DM LINE Penelope -550 44 1 5 715 275 349 14 0 chr3R 17089110 17089256 -10815797 + (CATATA)n Simple_repeat Simple_repeat 2 149 0 5 715 24 77 0 0 chr3R 17091206 17091258 -10813795 + AT_rich Low_complexity Low_complexity 1 52 0 5 715 34 42 0 0 chr3R 17092602 17092650 -10812403 + AT_rich Low_complexity Low_complexity 1 48 0 5 715 27 92 0 0 chr3R 17093480 17093556 -10811497 + AT_rich Low_complexity Low_complexity 1 76 0 5 715 211 192 39 0 chr3R 17102422 17102474 -10802579 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 715 24 53 0 0 chr3R 17102874 17102912 -10802141 + AT_rich Low_complexity Low_complexity 1 38 0 5 715 25 0 0 0 chr3R 17107514 17107539 -10797514 + AT_rich Low_complexity Low_complexity 1 25 0 5 715 216 135 0 0 chr3R 17110438 17110475 -10794578 + (TGG)n Simple_repeat Simple_repeat 1 37 0 5 715 240 59 0 0 chr3R 17113077 17113111 -10791942 + (GAGTG)n Simple_repeat Simple_repeat 5 38 0 5 715 234 203 17 0 chr3R 17113871 17113930 -10791123 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 715 197 39 0 119 chr3R 17115395 17115454 -10789599 + (TTA)n Simple_repeat Simple_repeat 2 53 0 5 715 21 0 0 0 chr3R 17115454 17115475 -10789578 + AT_rich Low_complexity Low_complexity 1 21 0 5 715 228 135 0 0 chr3R 17115972 17116009 -10789044 + (TAGA)n Simple_repeat Simple_repeat 3 39 0 5 715 30 0 0 0 chr3R 17118986 17119016 -10786037 + AT_rich Low_complexity Low_complexity 1 30 0 5 715 189 121 0 0 chr3R 17120339 17120372 -10784681 + (CGAAA)n Simple_repeat Simple_repeat 2 34 0 5 715 758 140 148 66 chr3R 17121261 17121505 -10783548 - DNAREP1_DM LINE Penelope -330 264 1 5 715 31 26 0 0 chr3R 17135653 17135691 -10769362 + AT_rich Low_complexity Low_complexity 1 38 0 5 715 21 0 0 0 chr3R 17136568 17136589 -10768464 + AT_rich Low_complexity Low_complexity 1 21 0 5 715 26 0 0 0 chr3R 17138127 17138153 -10766900 + AT_rich Low_complexity Low_complexity 1 26 0 5 715 37 86 0 0 chr3R 17139032 17139125 -10765928 + AT_rich Low_complexity Low_complexity 1 93 0 5 715 22 0 0 0 chr3R 17140013 17140035 -10765018 + AT_rich Low_complexity Low_complexity 1 22 0 5 715 26 0 0 0 chr3R 17141539 17141565 -10763488 + AT_rich Low_complexity Low_complexity 1 26 0 5 715 21 89 0 0 chr3R 17143971 17144027 -10761026 + AT_rich Low_complexity Low_complexity 1 56 0 5 715 211 184 0 0 chr3R 17148489 17148527 -10756526 + (TTCGGG)n Simple_repeat Simple_repeat 6 43 0 5 715 22 0 0 0 chr3R 17148818 17148840 -10756213 + AT_rich Low_complexity Low_complexity 1 22 0 5 715 194 62 31 0 chr3R 17149497 17149529 -10755524 + (GGAA)n Simple_repeat Simple_repeat 3 35 0 5 715 336 133 0 0 chr3R 17150040 17150100 -10754953 + (TAG)n Simple_repeat Simple_repeat 1 60 0 5 715 23 0 0 0 chr3R 17150232 17150255 -10754798 + AT_rich Low_complexity Low_complexity 1 23 0 5 715 227 250 28 0 chr3R 17150986 17151058 -10753995 + (TTGGGG)n Simple_repeat Simple_repeat 1 74 0 5 715 204 219 13 52 chr3R 17151382 17151459 -10753594 + (CATATA)n Simple_repeat Simple_repeat 1 74 0 5 715 270 250 0 37 chr3R 17151865 17151973 -10753080 + (TG)n Simple_repeat Simple_repeat 2 105 0 5 715 213 151 0 0 chr3R 17152129 17152182 -10752871 + T-rich Low_complexity Low_complexity 1 53 0 5 715 294 87 0 0 chr3R 17152354 17152400 -10752653 + (CGAA)n Simple_repeat Simple_repeat 2 47 0 5 715 186 71 0 0 chr3R 17152526 17152554 -10752499 + (CAGAA)n Simple_repeat Simple_repeat 4 31 0 5 715 205 173 19 37 chr3R 17152705 17152759 -10752294 + (TAG)n Simple_repeat Simple_repeat 2 54 0 5 715 189 0 0 0 chr3R 17153170 17153191 -10751862 + (T)n Simple_repeat Simple_repeat 1 21 0 5 715 195 42 0 0 chr3R 17154724 17154748 -10750305 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 715 245 154 39 0 chr3R 17155026 17155078 -10749975 + (TATG)n Simple_repeat Simple_repeat 3 56 0 5 715 189 0 0 0 chr3R 17155170 17155191 -10749862 + (TAAAA)n Simple_repeat Simple_repeat 5 25 0 5 715 207 125 0 0 chr3R 17155706 17155746 -10749307 + (TCC)n Simple_repeat Simple_repeat 3 42 0 5 715 213 233 0 16 chr3R 17157216 17157277 -10747776 + (CAGA)n Simple_repeat Simple_repeat 2 61 0 5 715 278 197 0 0 chr3R 17158603 17158669 -10746384 + T-rich Low_complexity Low_complexity 2 67 0 5 715 34 42 0 0 chr3R 17158844 17158892 -10746161 + AT_rich Low_complexity Low_complexity 1 48 0 5 715 184 143 36 0 chr3R 17159486 17159542 -10745511 + (ATTG)n Simple_repeat Simple_repeat 2 59 0 5 715 198 0 0 0 chr3R 17159694 17159716 -10745337 + (T)n Simple_repeat Simple_repeat 1 22 0 5 715 235 250 0 32 chr3R 17162427 17162489 -10742564 + (CAG)n Simple_repeat Simple_repeat 2 61 0 5 715 236 409 7 7 chr3R 17164439 17164577 -10740476 + G-rich Low_complexity Low_complexity 6 143 0 5 715 204 40 0 0 chr3R 17165400 17165425 -10739628 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 715 218 230 54 0 chr3R 17167189 17167263 -10737790 + T-rich Low_complexity Low_complexity 1 78 0 5 715 304 294 9 9 chr3R 17168341 17168451 -10736602 + (CTG)n Simple_repeat Simple_repeat 1 110 0 5 715 252 111 0 0 chr3R 17168720 17168765 -10736288 + (CTG)n Simple_repeat Simple_repeat 3 47 0 5 716 207 88 0 0 chr3R 17171276 17171310 -10733743 + (CAG)n Simple_repeat Simple_repeat 2 35 0 5 716 300 261 0 0 chr3R 17174125 17174213 -10730840 + (TTG)n Simple_repeat Simple_repeat 2 89 0 5 716 38 0 0 0 chr3R 17176974 17177012 -10728041 + AT_rich Low_complexity Low_complexity 1 38 0 5 716 24 0 0 0 chr3R 17181369 17181393 -10723660 + AT_rich Low_complexity Low_complexity 1 24 0 5 716 25 0 0 0 chr3R 17185939 17185964 -10719089 + AT_rich Low_complexity Low_complexity 1 25 0 5 716 21 57 0 0 chr3R 17193514 17193549 -10711504 + AT_rich Low_complexity Low_complexity 1 35 0 5 716 22 35 0 0 chr3R 17194753 17194782 -10710271 + AT_rich Low_complexity Low_complexity 1 29 0 5 716 21 36 0 0 chr3R 17198061 17198089 -10706964 + AT_rich Low_complexity Low_complexity 1 28 0 5 716 23 86 0 0 chr3R 17199386 17199444 -10705609 + AT_rich Low_complexity Low_complexity 1 58 0 5 716 230 270 40 0 chr3R 17203796 17203870 -10701183 + (TATG)n Simple_repeat Simple_repeat 4 80 0 5 716 22 0 0 0 chr3R 17205486 17205508 -10699545 + AT_rich Low_complexity Low_complexity 1 22 0 5 716 22 35 0 0 chr3R 17206910 17206939 -10698114 + AT_rich Low_complexity Low_complexity 1 29 0 5 716 226 137 0 56 chr3R 17207488 17207542 -10697511 + ROO_I LTR Pao 676 726 -7530 5 716 49 66 0 0 chr3R 17210056 17210147 -10694906 + AT_rich Low_complexity Low_complexity 1 91 0 5 716 326 212 68 39 chr3R 17211136 17211239 -10693814 - DNAREP1_DM LINE Penelope -16 578 473 5 716 27 73 0 0 chr3R 17212465 17212520 -10692533 + AT_rich Low_complexity Low_complexity 1 55 0 5 716 21 0 0 0 chr3R 17213828 17213849 -10691204 + AT_rich Low_complexity Low_complexity 1 21 0 5 716 198 0 0 0 chr3R 17216951 17216973 -10688080 + (GGA)n Simple_repeat Simple_repeat 1 22 0 5 716 32 26 0 0 chr3R 17217318 17217357 -10687696 + AT_rich Low_complexity Low_complexity 1 39 0 5 716 26 50 0 0 chr3R 17217741 17217781 -10687272 + AT_rich Low_complexity Low_complexity 1 40 0 5 716 24 53 0 0 chr3R 17227337 17227375 -10677678 + AT_rich Low_complexity Low_complexity 1 38 0 5 716 29 28 0 0 chr3R 17228082 17228118 -10676935 + AT_rich Low_complexity Low_complexity 1 36 0 5 716 216 125 15 30 chr3R 17228480 17228546 -10676507 + (TCCA)n Simple_repeat Simple_repeat 3 67 0 5 716 22 80 0 0 chr3R 17229313 17229363 -10675690 + AT_rich Low_complexity Low_complexity 1 50 0 5 716 21 0 0 0 chr3R 17232366 17232387 -10672666 + AT_rich Low_complexity Low_complexity 1 21 0 5 716 21 36 0 0 chr3R 17234022 17234050 -10671003 + AT_rich Low_complexity Low_complexity 1 28 0 5 716 373 230 221 7 chr3R 17234400 17234536 -10670517 - DNAREP1_DM LINE Penelope -1 593 429 5 716 205 262 0 0 chr3R 17236215 17236276 -10668777 + CT-rich Low_complexity Low_complexity 1 61 0 5 716 34 0 0 0 chr3R 17236627 17236661 -10668392 + AT_rich Low_complexity Low_complexity 1 34 0 5 716 215 205 0 0 chr3R 17240221 17240260 -10664793 + (CAGG)n Simple_repeat Simple_repeat 2 40 0 5 716 186 43 0 0 chr3R 17240566 17240589 -10664464 + (CAG)n Simple_repeat Simple_repeat 2 24 0 5 716 236 267 0 0 chr3R 17241070 17241130 -10663923 + (TTG)n Simple_repeat Simple_repeat 1 60 0 5 716 201 121 0 0 chr3R 17242554 17242587 -10662466 + (TCCA)n Simple_repeat Simple_repeat 2 34 0 5 716 43 47 0 0 chr3R 17244681 17244745 -10660308 + AT_rich Low_complexity Low_complexity 1 64 0 5 716 217 231 0 0 chr3R 17245147 17245199 -10659854 + (ATCTG)n Simple_repeat Simple_repeat 4 55 0 5 716 207 114 0 0 chr3R 17245399 17245434 -10659619 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 716 29 0 0 0 chr3R 17245831 17245860 -10659193 + AT_rich Low_complexity Low_complexity 1 29 0 5 716 21 0 0 0 chr3R 17251926 17251947 -10653106 + AT_rich Low_complexity Low_complexity 1 21 0 5 716 210 150 0 0 chr3R 17254890 17254930 -10650123 + (AACTG)n Simple_repeat Simple_repeat 3 42 0 5 716 25 0 0 0 chr3R 17255461 17255486 -10649567 + AT_rich Low_complexity Low_complexity 1 25 0 5 716 217 226 0 16 chr3R 17258399 17258462 -10646591 + (CTGGGG)n Simple_repeat Simple_repeat 2 63 0 5 716 254 106 21 0 chr3R 17260177 17260224 -10644829 + (TC)n Simple_repeat Simple_repeat 2 49 0 5 716 21 36 0 0 chr3R 17260748 17260776 -10644277 + AT_rich Low_complexity Low_complexity 1 28 0 5 716 21 36 0 0 chr3R 17266567 17266595 -10638458 + AT_rich Low_complexity Low_complexity 1 28 0 5 716 21 0 0 0 chr3R 17267081 17267102 -10637951 + AT_rich Low_complexity Low_complexity 1 21 0 5 716 194 152 0 17 chr3R 17271600 17271660 -10633393 + (CTG)n Simple_repeat Simple_repeat 3 61 0 5 716 186 176 0 0 chr3R 17272153 17272204 -10632849 + CT-rich Low_complexity Low_complexity 1 51 0 5 716 29 28 0 0 chr3R 17272900 17272936 -10632117 + AT_rich Low_complexity Low_complexity 1 36 0 5 716 210 71 0 0 chr3R 17273460 17273488 -10631565 + (CAG)n Simple_repeat Simple_repeat 2 29 0 5 716 27 0 0 0 chr3R 17280099 17280126 -10624927 + AT_rich Low_complexity Low_complexity 1 27 0 5 716 26 0 0 0 chr3R 17285187 17285213 -10619840 + AT_rich Low_complexity Low_complexity 1 26 0 5 716 26 0 0 0 chr3R 17285261 17285287 -10619766 + AT_rich Low_complexity Low_complexity 1 26 0 5 716 33 43 0 0 chr3R 17285349 17285396 -10619657 + AT_rich Low_complexity Low_complexity 1 47 0 5 716 36 23 0 0 chr3R 17285436 17285479 -10619574 + AT_rich Low_complexity Low_complexity 1 43 0 5 716 25 48 0 46 chr3R 17285561 17285626 -10619427 + AT_rich Low_complexity Low_complexity 1 62 0 5 716 29 47 0 0 chr3R 17286765 17286808 -10618245 + AT_rich Low_complexity Low_complexity 1 43 0 5 716 210 71 0 0 chr3R 17287557 17287585 -10617468 + (CAGTT)n Simple_repeat Simple_repeat 1 28 0 5 716 243 61 0 0 chr3R 17287802 17287835 -10617218 + (CATCG)n Simple_repeat Simple_repeat 3 35 0 5 716 30 45 0 0 chr3R 17290966 17291010 -10614043 + AT_rich Low_complexity Low_complexity 1 44 0 5 716 40 21 0 0 chr3R 17291118 17291165 -10613888 + AT_rich Low_complexity Low_complexity 1 47 0 5 716 195 42 0 0 chr3R 17291534 17291558 -10613495 + (TCGGG)n Simple_repeat Simple_repeat 2 25 0 5 716 22 70 0 0 chr3R 17300901 17300944 -10604109 + AT_rich Low_complexity Low_complexity 1 43 0 5 717 236 171 0 0 chr3R 17305364 17305405 -10599648 - DNAREP1_DM LINE Penelope -544 50 10 5 717 563 207 210 10 chr3R 17314147 17314342 -10590711 + DNAREP1_DM LINE Penelope 361 594 0 5 717 352 191 0 0 chr3R 17321584 17321652 -10583401 + DNAREP1_DM LINE Penelope 364 431 -163 5 717 21 0 0 0 chr3R 17323002 17323023 -10582030 + AT_rich Low_complexity Low_complexity 1 21 0 5 717 22 35 0 0 chr3R 17333351 17333380 -10571673 + AT_rich Low_complexity Low_complexity 1 29 0 5 717 24 32 0 0 chr3R 17338351 17338382 -10566671 + AT_rich Low_complexity Low_complexity 1 31 0 5 717 28 0 0 0 chr3R 17341446 17341474 -10563579 + AT_rich Low_complexity Low_complexity 1 28 0 5 717 236 77 26 0 chr3R 17343760 17343799 -10561254 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 717 21 36 0 0 chr3R 17345986 17346014 -10559039 + AT_rich Low_complexity Low_complexity 1 28 0 5 717 22 0 0 0 chr3R 17349436 17349458 -10555595 + AT_rich Low_complexity Low_complexity 1 22 0 5 717 44 56 0 0 chr3R 17353672 17353744 -10551309 + AT_rich Low_complexity Low_complexity 1 72 0 5 717 195 167 0 0 chr3R 17355255 17355297 -10549756 + (TGGG)n Simple_repeat Simple_repeat 2 43 0 5 717 183 42 0 0 chr3R 17356603 17356627 -10548426 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 717 25 75 0 0 chr3R 17361233 17361286 -10543767 + AT_rich Low_complexity Low_complexity 1 53 0 5 717 214 215 49 25 chr3R 17361838 17361919 -10543134 + (GGTTG)n Simple_repeat Simple_repeat 5 87 0 5 717 21 0 0 0 chr3R 17362001 17362022 -10543031 + AT_rich Low_complexity Low_complexity 1 21 0 5 717 219 214 0 0 chr3R 17362380 17362422 -10542631 + (CTG)n Simple_repeat Simple_repeat 3 44 0 5 717 204 135 0 0 chr3R 17363647 17363684 -10541369 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 717 37 0 0 0 chr3R 17365818 17365855 -10539198 + AT_rich Low_complexity Low_complexity 1 37 0 5 717 229 204 0 0 chr3R 17366400 17366444 -10538609 + A-rich Low_complexity Low_complexity 2 45 0 5 717 25 31 0 0 chr3R 17367780 17367812 -10537241 + AT_rich Low_complexity Low_complexity 1 32 0 5 717 21 0 0 0 chr3R 17373019 17373040 -10532013 + AT_rich Low_complexity Low_complexity 1 21 0 5 717 238 191 0 0 chr3R 17377313 17377360 -10527693 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 717 194 136 23 0 chr3R 17377398 17377442 -10527611 + GA-rich Low_complexity Low_complexity 1 45 0 5 717 246 32 0 0 chr3R 17378229 17378260 -10526793 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 717 24 53 0 0 chr3R 17380851 17380889 -10524164 + AT_rich Low_complexity Low_complexity 1 38 0 5 717 202 298 0 0 chr3R 17381880 17381974 -10523079 + (ATG)n Simple_repeat Simple_repeat 1 94 0 5 717 216 86 0 0 chr3R 17382911 17382946 -10522107 + (CTG)n Simple_repeat Simple_repeat 1 35 0 5 717 290 159 14 0 chr3R 17382944 17383013 -10522040 + (TGG)n Simple_repeat Simple_repeat 1 70 0 5 717 249 33 0 0 chr3R 17383205 17383235 -10521818 + (GGAGA)n Simple_repeat Simple_repeat 4 33 0 5 717 235 218 0 0 chr3R 17383298 17383353 -10521700 + (CAGC)n Simple_repeat Simple_repeat 3 57 0 5 717 240 172 0 0 chr3R 17384807 17384865 -10520188 + CT-rich Low_complexity Low_complexity 1 58 0 5 717 233 196 39 0 chr3R 17386092 17386143 -10518910 - DNAREP1_DM LINE Penelope -535 59 7 5 717 213 39 0 0 chr3R 17387364 17387390 -10517663 + (TC)n Simple_repeat Simple_repeat 2 27 0 5 717 216 209 0 0 chr3R 17387802 17387845 -10517208 + (TTG)n Simple_repeat Simple_repeat 3 45 0 5 717 48 81 0 0 chr3R 17388121 17388232 -10516821 + AT_rich Low_complexity Low_complexity 1 111 0 5 717 23 78 0 0 chr3R 17390317 17390368 -10514685 + AT_rich Low_complexity Low_complexity 1 51 0 5 717 26 50 0 0 chr3R 17393738 17393778 -10511275 + AT_rich Low_complexity Low_complexity 1 40 0 5 717 49 43 0 0 chr3R 17395738 17395808 -10509245 + AT_rich Low_complexity Low_complexity 1 70 0 5 717 236 200 0 14 chr3R 17396520 17396591 -10508462 + (TG)n Simple_repeat Simple_repeat 2 71 0 5 717 194 61 60 20 chr3R 17396651 17396701 -10508352 + (TTTTG)n Simple_repeat Simple_repeat 2 53 0 5 717 219 36 0 0 chr3R 17396971 17396999 -10508054 + (CTTTG)n Simple_repeat Simple_repeat 2 29 0 5 717 21 0 0 0 chr3R 17397031 17397052 -10508001 + AT_rich Low_complexity Low_complexity 1 21 0 5 717 273 241 0 44 chr3R 17398373 17398464 -10506589 + T-rich Low_complexity Low_complexity 3 89 0 5 717 234 233 0 0 chr3R 17399362 17399422 -10505631 + (TCG)n Simple_repeat Simple_repeat 1 60 0 5 717 23 0 0 0 chr3R 17402737 17402760 -10502293 + AT_rich Low_complexity Low_complexity 1 23 0 5 717 300 138 0 0 chr3R 17405610 17405675 -10499378 + (ATG)n Simple_repeat Simple_repeat 1 65 0 5 717 38 39 0 0 chr3R 17406906 17406958 -10498095 + AT_rich Low_complexity Low_complexity 1 52 0 5 717 255 79 0 0 chr3R 17407690 17407728 -10497325 + (A)n Simple_repeat Simple_repeat 1 38 0 5 717 23 0 0 0 chr3R 17408358 17408381 -10496672 + AT_rich Low_complexity Low_complexity 1 23 0 5 717 192 97 0 0 chr3R 17409553 17409584 -10495469 + (GAA)n Simple_repeat Simple_repeat 2 32 0 5 717 254 50 25 0 chr3R 17411748 17411788 -10493265 + (TTTTTA)n Simple_repeat Simple_repeat 6 46 0 5 717 35 24 0 0 chr3R 17412579 17412621 -10492432 + AT_rich Low_complexity Low_complexity 1 42 0 5 717 21 89 0 0 chr3R 17414751 17414807 -10490246 + AT_rich Low_complexity Low_complexity 1 56 0 5 717 350 57 19 0 chr3R 17415579 17415632 -10489421 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 717 264 111 0 0 chr3R 17415911 17415956 -10489097 + (TGAG)n Simple_repeat Simple_repeat 4 48 0 5 717 23 0 0 0 chr3R 17419332 17419355 -10485698 + AT_rich Low_complexity Low_complexity 1 23 0 5 717 186 167 0 0 chr3R 17419987 17420023 -10485030 + (CGGA)n Simple_repeat Simple_repeat 2 37 0 5 717 28 0 0 0 chr3R 17420195 17420223 -10484830 + AT_rich Low_complexity Low_complexity 1 28 0 5 717 209 83 28 0 chr3R 17422929 17422965 -10482088 + (CAT)n Simple_repeat Simple_repeat 2 38 0 5 717 213 94 0 0 chr3R 17424462 17424494 -10480559 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 717 272 154 31 0 chr3R 17426523 17426588 -10478465 + (GCTG)n Simple_repeat Simple_repeat 1 67 0 5 717 21 0 0 0 chr3R 17427047 17427068 -10477985 + AT_rich Low_complexity Low_complexity 1 21 0 5 717 24 100 0 0 chr3R 17430181 17430261 -10474792 + AT_rich Low_complexity Low_complexity 1 80 0 5 717 28 29 0 0 chr3R 17430699 17430734 -10474319 + AT_rich Low_complexity Low_complexity 1 35 0 5 717 207 152 0 42 chr3R 17431108 17431156 -10473897 + A-rich Low_complexity Low_complexity 2 47 0 5 717 192 77 0 0 chr3R 17431358 17431384 -10473669 + (TC)n Simple_repeat Simple_repeat 2 27 0 5 717 25 31 0 0 chr3R 17431928 17431960 -10473093 + AT_rich Low_complexity Low_complexity 1 32 0 5 718 261 262 0 24 chr3R 17432708 17432790 -10472263 + GA-rich Low_complexity Low_complexity 5 84 0 5 718 7289 82 595 5 chr3R 17434785 17437357 -10467696 - FB4_DM DNA Tc1 0 4089 1 5 718 180 97 0 0 chr3R 17440295 17440326 -10464727 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 718 230 56 28 0 chr3R 17440437 17440473 -10464580 + (CCA)n Simple_repeat Simple_repeat 2 38 0 5 718 201 132 0 0 chr3R 17441186 17441224 -10463829 + (TGGA)n Simple_repeat Simple_repeat 2 39 0 5 718 214 254 17 0 chr3R 17441874 17441933 -10463120 + (CAG)n Simple_repeat Simple_repeat 1 60 0 5 718 21 0 0 0 chr3R 17442409 17442430 -10462623 + AT_rich Low_complexity Low_complexity 1 21 0 5 718 225 180 0 0 chr3R 17442575 17442625 -10462428 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 718 25 31 0 0 chr3R 17443642 17443674 -10461379 + AT_rich Low_complexity Low_complexity 1 32 0 5 718 32 43 0 0 chr3R 17443799 17443845 -10461208 + AT_rich Low_complexity Low_complexity 1 46 0 5 718 186 103 0 0 chr3R 17444158 17444187 -10460866 + (GA)n Simple_repeat Simple_repeat 2 30 0 5 718 21 36 0 0 chr3R 17445322 17445350 -10459703 + AT_rich Low_complexity Low_complexity 1 28 0 5 718 36 0 0 0 chr3R 17445843 17445879 -10459174 + AT_rich Low_complexity Low_complexity 1 36 0 5 718 22 35 0 0 chr3R 17446028 17446057 -10458996 + AT_rich Low_complexity Low_complexity 1 29 0 5 718 24 0 0 0 chr3R 17446461 17446485 -10458568 + AT_rich Low_complexity Low_complexity 1 24 0 5 718 23 0 0 0 chr3R 17446697 17446720 -10458333 + AT_rich Low_complexity Low_complexity 1 23 0 5 718 198 0 0 0 chr3R 17446720 17446742 -10458311 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 718 21 0 0 0 chr3R 17447190 17447211 -10457842 + AT_rich Low_complexity Low_complexity 1 21 0 5 718 198 0 0 0 chr3R 17447239 17447261 -10457792 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 718 26 64 0 0 chr3R 17448117 17448164 -10456889 + AT_rich Low_complexity Low_complexity 1 47 0 5 718 207 162 0 0 chr3R 17448699 17448736 -10456317 + (CCG)n Simple_repeat Simple_repeat 1 37 0 5 718 303 290 0 11 chr3R 17448919 17449013 -10456040 + (TTG)n Simple_repeat Simple_repeat 1 93 0 5 718 244 152 51 0 chr3R 17449211 17449270 -10455783 - ROO_I LTR Pao -7555 701 640 5 718 237 123 29 44 chr3R 17449861 17449929 -10455124 + (TATAA)n Simple_repeat Simple_repeat 1 67 0 5 718 183 42 0 0 chr3R 17450142 17450166 -10454887 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 5 718 193 226 0 23 chr3R 17451791 17451877 -10453176 + (CTG)n Simple_repeat Simple_repeat 3 86 0 5 718 280 247 0 13 chr3R 17452112 17452190 -10452863 + (CTG)n Simple_repeat Simple_repeat 1 77 0 5 718 234 45 44 22 chr3R 17452270 17452315 -10452738 + (TC)n Simple_repeat Simple_repeat 2 47 0 5 718 217 348 0 0 chr3R 17456133 17456222 -10448831 + (CA)n Simple_repeat Simple_repeat 1 89 0 5 718 239 176 0 19 chr3R 17458487 17458539 -10446514 + GA-rich Low_complexity Low_complexity 1 51 0 5 718 201 139 0 0 chr3R 17460477 17460520 -10444533 + (GAA)n Simple_repeat Simple_repeat 2 44 0 5 718 224 229 16 0 chr3R 17460817 17460878 -10444175 + T-rich Low_complexity Low_complexity 2 63 0 5 718 34 24 0 0 chr3R 17464973 17465014 -10440039 + AT_rich Low_complexity Low_complexity 1 41 0 5 718 25 0 0 0 chr3R 17468501 17468526 -10436527 + AT_rich Low_complexity Low_complexity 1 25 0 5 718 21 0 0 0 chr3R 17469595 17469616 -10435437 + AT_rich Low_complexity Low_complexity 1 21 0 5 718 21 0 0 0 chr3R 17473558 17473579 -10431474 + AT_rich Low_complexity Low_complexity 1 21 0 5 718 27 81 0 0 chr3R 17475226 17475288 -10429765 + AT_rich Low_complexity Low_complexity 1 62 0 5 718 30 89 0 0 chr3R 17475365 17475444 -10429609 + AT_rich Low_complexity Low_complexity 1 79 0 5 718 213 209 0 0 chr3R 17477501 17477544 -10427509 + GA-rich Low_complexity Low_complexity 2 44 0 5 718 25 31 0 0 chr3R 17482153 17482185 -10422868 + AT_rich Low_complexity Low_complexity 1 32 0 5 718 29 0 0 0 chr3R 17482775 17482804 -10422249 + AT_rich Low_complexity Low_complexity 1 29 0 5 718 350 85 0 0 chr3R 17484894 17484941 -10420112 - DNAREP1_DM LINE Penelope 0 594 548 5 718 345 159 34 79 chr3R 17484956 17485045 -10420008 - DNAREP1_DM LINE Penelope -509 85 1 5 718 210 147 0 0 chr3R 17485872 17485906 -10419147 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 718 22 35 0 0 chr3R 17488252 17488281 -10416772 + AT_rich Low_complexity Low_complexity 1 29 0 5 718 25 31 0 0 chr3R 17489784 17489816 -10415237 + AT_rich Low_complexity Low_complexity 1 32 0 5 718 221 200 36 0 chr3R 17498183 17498238 -10406815 + (CATA)n Simple_repeat Simple_repeat 3 59 0 5 718 23 0 0 0 chr3R 17501355 17501378 -10403675 + AT_rich Low_complexity Low_complexity 1 23 0 5 718 24 77 0 0 chr3R 17502657 17502709 -10402344 + AT_rich Low_complexity Low_complexity 1 52 0 5 718 214 255 0 18 chr3R 17504242 17504298 -10400755 + (TTCTG)n Simple_repeat Simple_repeat 1 55 0 5 718 290 265 0 12 chr3R 17510654 17510738 -10394315 + CT-rich Low_complexity Low_complexity 1 83 0 5 718 22 0 0 0 chr3R 17511095 17511117 -10393936 + AT_rich Low_complexity Low_complexity 1 22 0 5 718 21 0 0 0 chr3R 17511123 17511144 -10393909 + AT_rich Low_complexity Low_complexity 1 21 0 5 718 249 33 0 0 chr3R 17516519 17516549 -10388504 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 718 209 320 0 26 chr3R 17517270 17517347 -10387706 + (CCCCAA)n Simple_repeat Simple_repeat 2 76 0 5 718 22 56 0 0 chr3R 17519628 17519664 -10385389 + AT_rich Low_complexity Low_complexity 1 36 0 5 718 228 277 15 0 chr3R 17520380 17520445 -10384608 + (CGGAG)n Simple_repeat Simple_repeat 2 67 0 5 718 207 211 19 0 chr3R 17520640 17520692 -10384361 + (TTG)n Simple_repeat Simple_repeat 3 55 0 5 718 35 83 0 0 chr3R 17521156 17521240 -10383813 + AT_rich Low_complexity Low_complexity 1 84 0 5 718 22 35 0 0 chr3R 17521633 17521662 -10383391 + AT_rich Low_complexity Low_complexity 1 29 0 5 718 22 0 0 0 chr3R 17522544 17522566 -10382487 + AT_rich Low_complexity Low_complexity 1 22 0 5 718 29 0 0 0 chr3R 17524835 17524864 -10380189 + AT_rich Low_complexity Low_complexity 1 29 0 5 718 203 152 0 0 chr3R 17527773 17527806 -10377247 + CT-rich Low_complexity Low_complexity 2 34 0 5 718 22 0 0 0 chr3R 17528233 17528255 -10376798 + AT_rich Low_complexity Low_complexity 1 22 0 5 718 29 28 0 0 chr3R 17529228 17529264 -10375789 + AT_rich Low_complexity Low_complexity 1 36 0 5 718 34 0 0 0 chr3R 17531914 17531948 -10373105 + AT_rich Low_complexity Low_complexity 1 34 0 5 718 21 0 0 0 chr3R 17536226 17536247 -10368806 + AT_rich Low_complexity Low_complexity 1 21 0 5 718 21 36 0 0 chr3R 17539368 17539396 -10365657 + AT_rich Low_complexity Low_complexity 1 28 0 5 718 229 208 0 19 chr3R 17543535 17543589 -10361464 + CT-rich Low_complexity Low_complexity 2 54 0 5 718 24 0 0 0 chr3R 17546174 17546198 -10358855 + AT_rich Low_complexity Low_complexity 1 24 0 5 718 200 186 14 54 chr3R 17548947 17549021 -10356032 + (TTA)n Simple_repeat Simple_repeat 3 73 0 5 718 195 42 0 0 chr3R 17549675 17549699 -10355354 + (A)n Simple_repeat Simple_repeat 1 24 0 5 718 626 111 529 0 chr3R 17550290 17550460 -10354593 + DMRP1 Unknown Unknown 39 298 -48 5 718 238 200 0 0 chr3R 17551452 17551507 -10353546 + (TA)n Simple_repeat Simple_repeat 1 55 0 5 718 28 48 0 0 chr3R 17553658 17553700 -10351353 + AT_rich Low_complexity Low_complexity 1 42 0 5 718 21 36 0 0 chr3R 17555460 17555488 -10349565 + AT_rich Low_complexity Low_complexity 1 28 0 5 718 29 28 0 0 chr3R 17562664 17562700 -10342353 + AT_rich Low_complexity Low_complexity 1 36 0 5 719 29 28 0 0 chr3R 17565029 17565065 -10339988 + AT_rich Low_complexity Low_complexity 1 36 0 5 719 23 0 0 0 chr3R 17574344 17574367 -10330686 + AT_rich Low_complexity Low_complexity 1 23 0 5 719 24 0 0 0 chr3R 17585129 17585153 -10319900 + AT_rich Low_complexity Low_complexity 1 24 0 5 719 3105 25 0 0 chr3R 17586898 17587254 -10317799 - MDG1_LTR LTR Gypsy 0 442 87 5 719 423 100 0 0 chr3R 17587254 17587324 -10317729 + (TTA)n Simple_repeat Simple_repeat 3 72 0 5 719 56687 7 24 1 chr3R 17587328 17593791 -10311262 - MDG1_I LTR Gypsy -98 6799 1 5 719 3105 25 0 0 chr3R 17593791 17594147 -10310906 - MDG1_LTR LTR Gypsy 0 442 87 5 719 423 100 0 0 chr3R 17594147 17594217 -10310836 + (TTA)n Simple_repeat Simple_repeat 3 72 0 5 719 337 167 0 81 chr3R 17597218 17597329 -10307724 - ROO_I LTR Pao -7515 741 640 5 719 192 40 0 0 chr3R 17606256 17606281 -10298772 + (T)n Simple_repeat Simple_repeat 1 25 0 5 719 214 279 0 0 chr3R 17608712 17608773 -10296280 + A-rich Low_complexity Low_complexity 2 62 0 5 719 21 0 0 0 chr3R 17609315 17609336 -10295717 + AT_rich Low_complexity Low_complexity 1 21 0 5 719 206 246 29 0 chr3R 17609530 17609599 -10295454 + (CAT)n Simple_repeat Simple_repeat 2 72 0 5 719 222 91 0 0 chr3R 17610060 17610093 -10294960 + (CATCT)n Simple_repeat Simple_repeat 2 34 0 5 719 210 37 0 0 chr3R 17610942 17610969 -10294084 + (CAATT)n Simple_repeat Simple_repeat 2 28 0 5 719 228 344 0 8 chr3R 17619660 17619786 -10285267 + (CA)n Simple_repeat Simple_repeat 1 125 0 5 719 205 167 0 0 chr3R 17619923 17619959 -10285094 + CT-rich Low_complexity Low_complexity 1 36 0 5 719 210 37 0 0 chr3R 17623526 17623553 -10281500 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 719 219 125 0 0 chr3R 17623874 17623914 -10281139 + (CGATG)n Simple_repeat Simple_repeat 3 42 0 5 719 180 273 0 0 chr3R 17624167 17624244 -10280809 + (ATG)n Simple_repeat Simple_repeat 1 77 0 5 719 279 114 0 0 chr3R 17624399 17624443 -10280610 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 719 22 0 0 0 chr3R 17626271 17626293 -10278760 + AT_rich Low_complexity Low_complexity 1 22 0 5 719 214 304 0 0 chr3R 17626452 17626521 -10278532 + (CAGT)n Simple_repeat Simple_repeat 4 72 0 5 719 240 224 0 0 chr3R 17629670 17629719 -10275334 + (CTG)n Simple_repeat Simple_repeat 3 51 0 5 719 22 35 0 0 chr3R 17631097 17631126 -10273927 + AT_rich Low_complexity Low_complexity 1 29 0 5 719 21 36 0 0 chr3R 17631568 17631596 -10273457 + AT_rich Low_complexity Low_complexity 1 28 0 5 719 182 91 30 0 chr3R 17632426 17632459 -10272594 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 719 284 138 0 15 chr3R 17634267 17634333 -10270720 + (CTG)n Simple_repeat Simple_repeat 1 65 0 5 719 259 74 0 53 chr3R 17635192 17635249 -10269804 + (CAT)n Simple_repeat Simple_repeat 3 56 0 5 719 201 39 0 0 chr3R 17635249 17635275 -10269778 + (CAG)n Simple_repeat Simple_repeat 3 28 0 5 719 189 0 0 0 chr3R 17635578 17635599 -10269454 + (T)n Simple_repeat Simple_repeat 1 21 0 5 719 180 0 0 0 chr3R 17637730 17637750 -10267303 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 719 222 156 0 0 chr3R 17638770 17638815 -10266238 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 719 243 0 0 0 chr3R 17639193 17639220 -10265833 + (T)n Simple_repeat Simple_repeat 1 27 0 5 719 246 143 0 0 chr3R 17639592 17639641 -10265412 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 719 234 174 0 0 chr3R 17640845 17640891 -10264162 + (CGGA)n Simple_repeat Simple_repeat 3 48 0 5 719 207 254 15 0 chr3R 17642113 17642180 -10262873 + (CTG)n Simple_repeat Simple_repeat 1 68 0 5 719 21 36 0 0 chr3R 17642426 17642454 -10262599 + AT_rich Low_complexity Low_complexity 1 28 0 5 719 27 0 0 0 chr3R 17644504 17644531 -10260522 + AT_rich Low_complexity Low_complexity 1 27 0 5 719 227 268 0 44 chr3R 17646639 17646729 -10258324 - ROO_I LTR Pao -7514 742 657 5 719 214 241 0 0 chr3R 17647502 17647556 -10257497 + GA-rich Low_complexity Low_complexity 1 54 0 5 719 251 71 24 0 chr3R 17648119 17648161 -10256892 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 719 24 32 0 0 chr3R 17648504 17648535 -10256518 + AT_rich Low_complexity Low_complexity 1 31 0 5 719 32 26 0 0 chr3R 17649904 17649943 -10255110 + AT_rich Low_complexity Low_complexity 1 39 0 5 719 25 65 0 0 chr3R 17650049 17650095 -10254958 + AT_rich Low_complexity Low_complexity 1 46 0 5 719 27 0 0 0 chr3R 17650106 17650133 -10254920 + AT_rich Low_complexity Low_complexity 1 27 0 5 719 209 194 0 0 chr3R 17651644 17651680 -10253373 + (CAG)n Simple_repeat Simple_repeat 3 38 0 5 719 231 88 0 0 chr3R 17651725 17651759 -10253294 + (GAA)n Simple_repeat Simple_repeat 2 35 0 5 719 22 0 0 0 chr3R 17652109 17652131 -10252922 + AT_rich Low_complexity Low_complexity 1 22 0 5 719 225 279 0 16 chr3R 17655499 17655561 -10249492 + (CAA)n Simple_repeat Simple_repeat 3 63 0 5 719 37 0 0 0 chr3R 17656138 17656175 -10248878 + AT_rich Low_complexity Low_complexity 1 37 0 5 719 24 0 0 0 chr3R 17661721 17661745 -10243308 + AT_rich Low_complexity Low_complexity 1 24 0 5 719 270 0 0 0 chr3R 17661870 17661900 -10243153 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 719 372 120 29 20 chr3R 17663200 17663302 -10241751 + ROO_I LTR Pao 641 743 -7513 5 719 274 172 0 0 chr3R 17663482 17663546 -10241507 - ROO_I LTR Pao -7540 716 653 5 719 304 241 0 33 chr3R 17665166 17665256 -10239797 + (CCCCAA)n Simple_repeat Simple_repeat 1 87 0 5 719 38 22 0 0 chr3R 17665549 17665594 -10239459 + AT_rich Low_complexity Low_complexity 1 45 0 5 719 25 51 0 0 chr3R 17665646 17665685 -10239368 + AT_rich Low_complexity Low_complexity 1 39 0 5 719 21 0 0 0 chr3R 17666913 17666934 -10238119 + AT_rich Low_complexity Low_complexity 1 21 0 5 719 222 159 0 22 chr3R 17667673 17667718 -10237335 + T-rich Low_complexity Low_complexity 3 46 0 5 719 54 0 0 0 chr3R 17672679 17672733 -10232320 + AT_rich Low_complexity Low_complexity 1 54 0 5 719 207 69 0 0 chr3R 17673485 17673514 -10231539 + (T)n Simple_repeat Simple_repeat 1 29 0 5 719 228 244 0 0 chr3R 17674255 17674300 -10230753 + (CATA)n Simple_repeat Simple_repeat 1 45 0 5 719 186 43 0 0 chr3R 17675108 17675131 -10229922 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 719 221 164 0 52 chr3R 17676364 17676422 -10228631 + T-rich Low_complexity Low_complexity 2 56 0 5 719 196 200 24 0 chr3R 17676726 17676811 -10228242 + (TG)n Simple_repeat Simple_repeat 1 87 0 5 719 33 73 0 0 chr3R 17676821 17676889 -10228164 + AT_rich Low_complexity Low_complexity 1 68 0 5 719 26 50 0 0 chr3R 17677098 17677138 -10227915 + AT_rich Low_complexity Low_complexity 1 40 0 5 719 25 83 0 0 chr3R 17677320 17677380 -10227673 + AT_rich Low_complexity Low_complexity 1 60 0 5 719 300 111 0 0 chr3R 17677493 17677538 -10227515 + (TTG)n Simple_repeat Simple_repeat 3 47 0 5 719 216 0 0 0 chr3R 17679621 17679645 -10225408 + (GA)n Simple_repeat Simple_repeat 2 25 0 5 719 23 33 0 0 chr3R 17679842 17679872 -10225181 + AT_rich Low_complexity Low_complexity 1 30 0 5 719 240 130 0 0 chr3R 17683681 17683727 -10221326 + (GGATG)n Simple_repeat Simple_repeat 5 50 0 5 719 183 139 0 0 chr3R 17685006 17685042 -10220011 + (T)n Simple_repeat Simple_repeat 1 36 0 5 719 213 132 0 86 chr3R 17685821 17685879 -10219174 + T-rich Low_complexity Low_complexity 2 54 0 5 719 26 50 0 0 chr3R 17686245 17686285 -10218768 + AT_rich Low_complexity Low_complexity 1 40 0 5 719 206 68 43 43 chr3R 17689938 17689984 -10215069 + (TATAA)n Simple_repeat Simple_repeat 1 46 0 5 720 183 80 0 0 chr3R 17698252 17698277 -10206776 + (TTA)n Simple_repeat Simple_repeat 2 26 0 5 720 22 0 0 0 chr3R 17699331 17699353 -10205700 + AT_rich Low_complexity Low_complexity 1 22 0 5 720 30 0 0 0 chr3R 17700622 17700652 -10204401 + AT_rich Low_complexity Low_complexity 1 30 0 5 720 26 30 0 0 chr3R 17702007 17702040 -10203013 + AT_rich Low_complexity Low_complexity 1 33 0 5 720 31 44 0 0 chr3R 17709631 17709676 -10195377 + AT_rich Low_complexity Low_complexity 1 45 0 5 720 25 31 0 0 chr3R 17710443 17710475 -10194578 + AT_rich Low_complexity Low_complexity 1 32 0 5 720 408 111 0 0 chr3R 17715903 17715966 -10189087 + (ACTG)n Simple_repeat Simple_repeat 1 63 0 5 720 183 42 0 0 chr3R 17716681 17716705 -10188348 + (GA)n Simple_repeat Simple_repeat 2 25 0 5 720 26 64 0 0 chr3R 17717354 17717401 -10187652 + AT_rich Low_complexity Low_complexity 1 47 0 5 720 21 36 0 0 chr3R 17719885 17719913 -10185140 + AT_rich Low_complexity Low_complexity 1 28 0 5 720 237 163 0 0 chr3R 17720048 17720097 -10184956 + (TGG)n Simple_repeat Simple_repeat 3 51 0 5 720 22 0 0 0 chr3R 17721301 17721323 -10183730 + AT_rich Low_complexity Low_complexity 1 22 0 5 720 33 56 0 0 chr3R 17721654 17721708 -10183345 + AT_rich Low_complexity Low_complexity 1 54 0 5 720 206 137 19 38 chr3R 17721978 17722031 -10183022 + T-rich Low_complexity Low_complexity 6 57 0 5 720 258 148 0 0 chr3R 17722058 17722112 -10182941 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 720 21 0 0 0 chr3R 17723499 17723520 -10181533 + AT_rich Low_complexity Low_complexity 1 21 0 5 720 357 174 0 0 chr3R 17723767 17723836 -10181217 + (GTATG)n Simple_repeat Simple_repeat 4 72 0 5 720 201 263 0 0 chr3R 17724008 17724065 -10180988 + T-rich Low_complexity Low_complexity 1 57 0 5 720 186 233 0 0 chr3R 17724725 17724785 -10180268 + (TTG)n Simple_repeat Simple_repeat 1 60 0 5 720 186 103 0 0 chr3R 17725280 17725309 -10179744 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 720 22 35 0 0 chr3R 17727444 17727473 -10177580 + AT_rich Low_complexity Low_complexity 1 29 0 5 720 183 114 0 0 chr3R 17729887 17729922 -10175131 + (CAT)n Simple_repeat Simple_repeat 1 35 0 5 720 236 250 0 0 chr3R 17731246 17731298 -10173755 + (CAG)n Simple_repeat Simple_repeat 1 52 0 5 720 23 33 0 0 chr3R 17731601 17731631 -10173422 + AT_rich Low_complexity Low_complexity 1 30 0 5 720 205 191 0 0 chr3R 17732442 17732484 -10172569 + T-rich Low_complexity Low_complexity 5 46 0 5 720 22 35 0 0 chr3R 17732833 17732862 -10172191 + AT_rich Low_complexity Low_complexity 1 29 0 5 720 198 0 0 0 chr3R 17733256 17733278 -10171775 + (CACAA)n Simple_repeat Simple_repeat 1 22 0 5 720 24 0 0 0 chr3R 17733920 17733944 -10171109 + AT_rich Low_complexity Low_complexity 1 24 0 5 720 33 25 0 0 chr3R 17734073 17734113 -10170940 + AT_rich Low_complexity Low_complexity 1 40 0 5 720 23 0 0 0 chr3R 17734606 17734629 -10170424 + AT_rich Low_complexity Low_complexity 1 23 0 5 720 294 164 0 0 chr3R 17734686 17734741 -10170312 + (TTCGG)n Simple_repeat Simple_repeat 1 55 0 5 720 23 68 0 0 chr3R 17735291 17735335 -10169718 + AT_rich Low_complexity Low_complexity 1 44 0 5 720 30 0 0 0 chr3R 17741231 17741261 -10163792 + AT_rich Low_complexity Low_complexity 1 30 0 5 720 25 31 0 0 chr3R 17741977 17742009 -10163044 + AT_rich Low_complexity Low_complexity 1 32 0 5 720 201 39 0 0 chr3R 17742800 17742826 -10162227 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 720 219 152 0 0 chr3R 17743916 17743962 -10161091 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 720 219 260 0 38 chr3R 17744955 17745035 -10160018 + T-rich Low_complexity Low_complexity 5 81 0 5 720 243 0 0 0 chr3R 17749264 17749291 -10155762 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 720 188 35 35 0 chr3R 17751144 17751173 -10153880 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 720 180 0 0 0 chr3R 17752673 17752693 -10152360 + (T)n Simple_repeat Simple_repeat 1 20 0 5 720 195 69 0 0 chr3R 17753638 17753667 -10151386 + (T)n Simple_repeat Simple_repeat 1 29 0 5 720 48 0 0 0 chr3R 17757313 17757361 -10147692 + AT_rich Low_complexity Low_complexity 1 48 0 5 720 25 0 0 0 chr3R 17757793 17757818 -10147235 + AT_rich Low_complexity Low_complexity 1 25 0 5 720 205 186 23 0 chr3R 17758397 17758440 -10146613 + (CTG)n Simple_repeat Simple_repeat 2 45 0 5 720 180 0 0 0 chr3R 17758534 17758554 -10146499 + (CAGAC)n Simple_repeat Simple_repeat 4 23 0 5 720 21 0 0 0 chr3R 17758910 17758931 -10146122 + AT_rich Low_complexity Low_complexity 1 21 0 5 720 242 224 0 0 chr3R 17759756 17759814 -10145239 + T-rich Low_complexity Low_complexity 1 58 0 5 720 240 167 0 0 chr3R 17760007 17760055 -10144998 + (CAG)n Simple_repeat Simple_repeat 3 50 0 5 720 207 69 0 0 chr3R 17761842 17761871 -10143182 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 720 252 0 0 0 chr3R 17762448 17762476 -10142577 + (CTG)n Simple_repeat Simple_repeat 1 28 0 5 720 230 195 0 163 chr3R 17763205 17763303 -10141750 - ROO_I LTR Pao -7523 733 652 5 720 227 238 0 31 chr3R 17763311 17763376 -10141677 + (ATG)n Simple_repeat Simple_repeat 1 63 0 5 720 209 312 14 21 chr3R 17764199 17764343 -10140710 + T-rich Low_complexity Low_complexity 6 148 0 5 720 262 250 0 0 chr3R 17765220 17765280 -10139773 + (CAG)n Simple_repeat Simple_repeat 2 61 0 5 720 213 330 0 0 chr3R 17766747 17766838 -10138215 + (CAGT)n Simple_repeat Simple_repeat 1 91 0 5 720 249 83 0 0 chr3R 17766973 17767009 -10138044 + (TACGG)n Simple_repeat Simple_repeat 4 39 0 5 720 180 77 0 0 chr3R 17767010 17767036 -10138017 + (ACCG)n Simple_repeat Simple_repeat 4 29 0 5 720 205 250 0 0 chr3R 17767068 17767112 -10137941 + (CAG)n Simple_repeat Simple_repeat 3 46 0 5 720 271 65 21 21 chr3R 17767743 17767790 -10137263 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 720 192 77 0 0 chr3R 17768688 17768714 -10136339 + (CAG)n Simple_repeat Simple_repeat 1 26 0 5 720 183 42 0 0 chr3R 17768928 17768952 -10136101 + (CAA)n Simple_repeat Simple_repeat 3 26 0 5 720 321 68 0 0 chr3R 17769911 17769955 -10135098 + (CAG)n Simple_repeat Simple_repeat 1 44 0 5 720 291 104 0 0 chr3R 17770145 17770193 -10134860 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 720 33 25 0 0 chr3R 17770247 17770287 -10134766 + AT_rich Low_complexity Low_complexity 1 40 0 5 720 29 47 0 0 chr3R 17771107 17771150 -10133903 + AT_rich Low_complexity Low_complexity 1 43 0 5 720 201 162 0 0 chr3R 17773195 17773232 -10131821 + A-rich Low_complexity Low_complexity 2 38 0 5 720 218 154 18 55 chr3R 17773921 17773976 -10131077 + A-rich Low_complexity Low_complexity 2 54 0 5 720 279 104 0 0 chr3R 17774364 17774412 -10130641 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 720 207 255 0 0 chr3R 17774633 17774684 -10130369 + CT-rich Low_complexity Low_complexity 3 53 0 5 720 306 132 0 0 chr3R 17775208 17775261 -10129792 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 720 25 51 0 0 chr3R 17776597 17776636 -10128417 + AT_rich Low_complexity Low_complexity 1 39 0 5 720 186 167 0 0 chr3R 17777454 17777490 -10127563 + (CAA)n Simple_repeat Simple_repeat 1 36 0 5 720 21 0 0 0 chr3R 17778831 17778852 -10126201 + AT_rich Low_complexity Low_complexity 1 21 0 5 720 204 40 0 0 chr3R 17780110 17780135 -10124918 + (CTG)n Simple_repeat Simple_repeat 2 26 0 5 720 287 209 0 32 chr3R 17781338 17781432 -10123621 - ROO_I LTR Pao -7523 733 643 5 720 273 29 0 0 chr3R 17781880 17781914 -10123139 + (CAG)n Simple_repeat Simple_repeat 2 35 0 5 720 21 36 0 0 chr3R 17782240 17782268 -10122785 + AT_rich Low_complexity Low_complexity 1 28 0 5 720 207 211 0 19 chr3R 17783619 17783672 -10121381 + (CAATC)n Simple_repeat Simple_repeat 3 54 0 5 720 231 125 0 0 chr3R 17783723 17783763 -10121290 + (CAGAA)n Simple_repeat Simple_repeat 2 41 0 5 720 288 120 0 0 chr3R 17784027 17784077 -10120976 + (TA)n Simple_repeat Simple_repeat 1 50 0 5 720 64 26 0 0 chr3R 17785784 17785862 -10119191 + AT_rich Low_complexity Low_complexity 1 78 0 5 720 192 40 0 0 chr3R 17787499 17787524 -10117529 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 720 195 129 0 0 chr3R 17789485 17789516 -10115537 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 720 189 121 0 0 chr3R 17790278 17790311 -10114742 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 720 189 0 0 0 chr3R 17791385 17791406 -10113647 + (TG)n Simple_repeat Simple_repeat 1 21 0 5 720 267 93 0 0 chr3R 17791799 17791842 -10113211 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 720 192 40 0 0 chr3R 17792377 17792402 -10112651 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 720 37 39 0 0 chr3R 17792892 17792943 -10112110 + AT_rich Low_complexity Low_complexity 1 51 0 5 720 23 86 0 0 chr3R 17792992 17793050 -10112003 + AT_rich Low_complexity Low_complexity 1 58 0 5 720 257 153 58 12 chr3R 17796152 17796238 -10108815 + (TTATA)n Simple_repeat Simple_repeat 1 90 0 5 720 28 71 0 0 chr3R 17796268 17796324 -10108729 + AT_rich Low_complexity Low_complexity 1 56 0 5 720 21 0 0 0 chr3R 17798635 17798656 -10106397 + AT_rich Low_complexity Low_complexity 1 21 0 5 720 286 288 0 0 chr3R 17798947 17799020 -10106033 + (CCG)n Simple_repeat Simple_repeat 2 74 0 5 720 213 159 0 0 chr3R 17799153 17799197 -10105856 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 720 192 40 0 0 chr3R 17800453 17800478 -10104575 + (T)n Simple_repeat Simple_repeat 1 25 0 5 720 23 54 0 0 chr3R 17800502 17800539 -10104514 + AT_rich Low_complexity Low_complexity 1 37 0 5 720 26 0 0 0 chr3R 17801159 17801185 -10103868 + AT_rich Low_complexity Low_complexity 1 26 0 5 720 207 0 0 0 chr3R 17801399 17801422 -10103631 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 720 277 97 16 31 chr3R 17801637 17801701 -10103352 + (CAG)n Simple_repeat Simple_repeat 3 65 0 5 720 22 35 0 0 chr3R 17803275 17803304 -10101749 + AT_rich Low_complexity Low_complexity 1 29 0 5 720 300 102 0 0 chr3R 17804686 17804735 -10100318 + (CTG)n Simple_repeat Simple_repeat 3 51 0 5 720 180 0 0 0 chr3R 17804853 17804873 -10100180 + (TCG)n Simple_repeat Simple_repeat 2 21 0 5 720 221 163 23 0 chr3R 17805087 17805130 -10099923 + (CTG)n Simple_repeat Simple_repeat 2 45 0 5 720 320 147 0 13 chr3R 17805994 17806070 -10098983 + (ACTG)n Simple_repeat Simple_repeat 4 78 0 5 720 192 25 23 70 chr3R 17806601 17806644 -10098409 + (CAAAAA)n Simple_repeat Simple_repeat 4 44 0 5 720 224 241 0 0 chr3R 17808432 17808486 -10096567 + T-rich Low_complexity Low_complexity 1 54 0 5 720 183 42 0 0 chr3R 17808913 17808937 -10096116 + (T)n Simple_repeat Simple_repeat 1 24 0 5 720 225 65 0 0 chr3R 17810795 17810826 -10094227 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 720 207 69 0 0 chr3R 17811719 17811748 -10093305 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 720 23 54 0 0 chr3R 17813418 17813455 -10091598 + AT_rich Low_complexity Low_complexity 1 37 0 5 720 206 280 0 0 chr3R 17813652 17813702 -10091351 + (CTG)n Simple_repeat Simple_repeat 1 50 0 5 720 244 294 19 10 chr3R 17814225 17814328 -10090725 + (CTG)n Simple_repeat Simple_repeat 2 105 0 5 720 26 0 0 0 chr3R 17814954 17814980 -10090073 + AT_rich Low_complexity Low_complexity 1 26 0 5 720 24 32 0 0 chr3R 17815096 17815127 -10089926 + AT_rich Low_complexity Low_complexity 1 31 0 5 720 339 96 0 0 chr3R 17816013 17816065 -10088988 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 720 207 0 0 0 chr3R 17820145 17820168 -10084885 + (CAG)n Simple_repeat Simple_repeat 2 24 0 5 720 24 0 0 0 chr3R 17821925 17821949 -10083104 + AT_rich Low_complexity Low_complexity 1 24 0 5 720 231 167 0 0 chr3R 17822095 17822137 -10082916 + (CAG)n Simple_repeat Simple_repeat 1 42 0 5 720 201 74 0 0 chr3R 17822324 17822351 -10082702 + (CAG)n Simple_repeat Simple_repeat 1 27 0 5 720 216 0 0 0 chr3R 17822789 17822813 -10082240 + (ATATG)n Simple_repeat Simple_repeat 2 25 0 5 720 21 36 0 0 chr3R 17824111 17824139 -10080914 + AT_rich Low_complexity Low_complexity 1 28 0 5 720 206 30 0 83 chr3R 17824590 17824626 -10080427 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 721 198 71 0 0 chr3R 17825984 17826012 -10079041 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 721 25 0 0 0 chr3R 17826527 17826552 -10078501 + AT_rich Low_complexity Low_complexity 1 25 0 5 721 219 310 0 14 chr3R 17827358 17827430 -10077623 + (CGG)n Simple_repeat Simple_repeat 3 73 0 5 721 200 238 0 0 chr3R 17827607 17827649 -10077404 + T-rich Low_complexity Low_complexity 1 42 0 5 721 30 27 0 0 chr3R 17828367 17828404 -10076649 + AT_rich Low_complexity Low_complexity 1 37 0 5 721 50 51 0 0 chr3R 17828439 17828517 -10076536 + AT_rich Low_complexity Low_complexity 1 78 0 5 721 22 0 0 0 chr3R 17828552 17828574 -10076479 + AT_rich Low_complexity Low_complexity 1 22 0 5 721 253 214 9 75 chr3R 17830261 17830367 -10074686 + ROO_I LTR Pao 636 734 -7522 5 721 210 192 0 0 chr3R 17830549 17830601 -10074452 + (CAA)n Simple_repeat Simple_repeat 2 53 0 5 721 234 128 0 0 chr3R 17831310 17831349 -10073704 + (CGG)n Simple_repeat Simple_repeat 2 40 0 5 721 234 0 0 0 chr3R 17831924 17831950 -10073103 + (CGG)n Simple_repeat Simple_repeat 3 28 0 5 721 303 28 0 0 chr3R 17832364 17832400 -10072653 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 721 215 218 12 49 chr3R 17832483 17832565 -10072488 + A-rich Low_complexity Low_complexity 2 80 0 5 721 435 162 8 25 chr3R 17833071 17833191 -10071862 + (CAA)n Simple_repeat Simple_repeat 1 118 0 5 721 30 45 0 0 chr3R 17833656 17833700 -10071353 + AT_rich Low_complexity Low_complexity 1 44 0 5 721 23 33 0 0 chr3R 17834550 17834580 -10070473 + AT_rich Low_complexity Low_complexity 1 30 0 5 721 200 139 28 0 chr3R 17834748 17834784 -10070269 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 721 205 235 14 14 chr3R 17835240 17835309 -10069744 + A-rich Low_complexity Low_complexity 2 70 0 5 721 263 72 0 23 chr3R 17837098 17837141 -10067912 + (CAA)n Simple_repeat Simple_repeat 1 42 0 5 721 240 220 0 17 chr3R 17837520 17837580 -10067473 + (CAA)n Simple_repeat Simple_repeat 3 61 0 5 721 285 149 0 65 chr3R 17838673 17838766 -10066287 + (CAA)n Simple_repeat Simple_repeat 1 87 0 5 721 201 152 0 0 chr3R 17841099 17841132 -10063921 + GA-rich Low_complexity Low_complexity 2 34 0 5 721 21 0 0 0 chr3R 17842132 17842153 -10062900 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 21 0 0 0 chr3R 17844087 17844108 -10060945 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 23 0 0 0 chr3R 17845179 17845202 -10059851 + AT_rich Low_complexity Low_complexity 1 23 0 5 721 27 0 0 0 chr3R 17845768 17845795 -10059258 + AT_rich Low_complexity Low_complexity 1 27 0 5 721 24 67 0 0 chr3R 17851480 17851525 -10053528 + AT_rich Low_complexity Low_complexity 1 45 0 5 721 21 36 0 0 chr3R 17851571 17851599 -10053454 + AT_rich Low_complexity Low_complexity 1 28 0 5 721 252 0 0 0 chr3R 17864653 17864681 -10040372 + (CTTAA)n Simple_repeat Simple_repeat 1 28 0 5 721 21 0 0 0 chr3R 17868283 17868304 -10036749 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 275 222 14 14 chr3R 17868814 17868887 -10036166 + (CAG)n Simple_repeat Simple_repeat 3 75 0 5 721 222 62 0 0 chr3R 17871878 17871910 -10033143 + (T)n Simple_repeat Simple_repeat 1 32 0 5 721 213 132 0 0 chr3R 17873160 17873198 -10031855 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 721 219 186 0 0 chr3R 17874030 17874073 -10030980 + (ATTCG)n Simple_repeat Simple_repeat 5 47 0 5 721 234 214 18 9 chr3R 17876926 17876994 -10028059 + T-rich Low_complexity Low_complexity 1 68 0 5 721 23 33 0 0 chr3R 17877513 17877543 -10027510 + AT_rich Low_complexity Low_complexity 1 30 0 5 721 186 103 0 0 chr3R 17877964 17877993 -10027060 + (GAAAA)n Simple_repeat Simple_repeat 3 31 0 5 721 29 28 0 0 chr3R 17878779 17878815 -10026238 + AT_rich Low_complexity Low_complexity 1 36 0 5 721 21 0 0 0 chr3R 17879976 17879997 -10025056 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 203 179 0 0 chr3R 17880865 17880904 -10024149 + T-rich Low_complexity Low_complexity 1 39 0 5 721 216 0 0 0 chr3R 17881708 17881732 -10023321 + (ATG)n Simple_repeat Simple_repeat 3 26 0 5 721 243 0 0 0 chr3R 17884790 17884817 -10020236 + (A)n Simple_repeat Simple_repeat 1 27 0 5 721 22 35 0 0 chr3R 17885881 17885910 -10019143 + AT_rich Low_complexity Low_complexity 1 29 0 5 721 222 148 0 0 chr3R 17886644 17886698 -10018355 + (ATG)n Simple_repeat Simple_repeat 1 54 0 5 721 192 40 0 0 chr3R 17893695 17893720 -10011333 + (CTG)n Simple_repeat Simple_repeat 1 25 0 5 721 25 0 0 0 chr3R 17894679 17894704 -10010349 + AT_rich Low_complexity Low_complexity 1 25 0 5 721 51 51 0 0 chr3R 17895240 17895319 -10009734 + AT_rich Low_complexity Low_complexity 1 79 0 5 721 21 0 0 0 chr3R 17895772 17895793 -10009260 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 198 71 0 0 chr3R 17897241 17897269 -10007784 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 5 721 34 0 0 0 chr3R 17898168 17898202 -10006851 + AT_rich Low_complexity Low_complexity 1 34 0 5 721 26 0 0 0 chr3R 17898855 17898881 -10006172 + AT_rich Low_complexity Low_complexity 1 26 0 5 721 300 91 0 0 chr3R 17899518 17899562 -10005491 + (TA)n Simple_repeat Simple_repeat 1 44 0 5 721 28 0 0 0 chr3R 17900889 17900917 -10004136 + AT_rich Low_complexity Low_complexity 1 28 0 5 721 212 179 0 0 chr3R 17900969 17901008 -10004045 + A-rich Low_complexity Low_complexity 1 39 0 5 721 213 196 0 67 chr3R 17901232 17901292 -10003761 + A-rich Low_complexity Low_complexity 4 59 0 5 721 443 128 0 11 chr3R 17901627 17901714 -10003339 + (CCAA)n Simple_repeat Simple_repeat 3 88 0 5 721 23 0 0 0 chr3R 17902964 17902987 -10002066 + AT_rich Low_complexity Low_complexity 1 23 0 5 721 307 269 19 0 chr3R 17903292 17903396 -10001657 + (CAG)n Simple_repeat Simple_repeat 2 107 0 5 721 216 111 0 0 chr3R 17903578 17903614 -10001439 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 721 206 236 0 0 chr3R 17908902 17908957 -9996096 + T-rich Low_complexity Low_complexity 1 55 0 5 721 200 200 0 0 chr3R 17910375 17910425 -9994628 + (CTA)n Simple_repeat Simple_repeat 2 51 0 5 721 26 0 0 0 chr3R 17911225 17911251 -9993802 + AT_rich Low_complexity Low_complexity 1 26 0 5 721 229 320 0 0 chr3R 17911349 17911424 -9993629 + (CCG)n Simple_repeat Simple_repeat 1 75 0 5 721 240 35 0 0 chr3R 17914196 17914225 -9990828 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 721 22 0 0 0 chr3R 17915201 17915223 -9989830 + AT_rich Low_complexity Low_complexity 1 22 0 5 721 183 42 0 0 chr3R 17918266 17918290 -9986763 + (AACTG)n Simple_repeat Simple_repeat 5 28 0 5 721 211 216 0 0 chr3R 17920523 17920574 -9984479 + T-rich Low_complexity Low_complexity 1 51 0 5 721 187 54 0 51 chr3R 17920774 17920813 -9984240 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 721 201 74 0 0 chr3R 17923048 17923075 -9981978 + (TTCGG)n Simple_repeat Simple_repeat 5 31 0 5 721 219 69 0 0 chr3R 17924390 17924419 -9980634 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 721 203 147 0 0 chr3R 17924448 17924482 -9980571 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 721 30 0 0 0 chr3R 17924591 17924621 -9980432 + AT_rich Low_complexity Low_complexity 1 30 0 5 721 180 0 0 0 chr3R 17927353 17927373 -9977680 + (A)n Simple_repeat Simple_repeat 1 20 0 5 721 217 209 0 0 chr3R 17928765 17928808 -9976245 + (CCA)n Simple_repeat Simple_repeat 2 44 0 5 721 241 311 0 0 chr3R 17931147 17931237 -9973816 + (ATGGTG)n Simple_repeat Simple_repeat 2 91 0 5 721 258 258 0 0 chr3R 17932293 17932359 -9972694 + ROO_I LTR Pao 659 724 -7532 5 721 21 0 0 0 chr3R 17933403 17933424 -9971629 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 201 94 0 0 chr3R 17935868 17935900 -9969153 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 721 210 150 0 0 chr3R 17936850 17936890 -9968163 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 721 203 61 0 29 chr3R 17937713 17937747 -9967306 + (CATA)n Simple_repeat Simple_repeat 4 36 0 5 721 216 67 0 0 chr3R 17937824 17937854 -9967199 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 721 36 53 0 0 chr3R 17938820 17938877 -9966176 + AT_rich Low_complexity Low_complexity 1 57 0 5 721 21 82 0 0 chr3R 17941002 17941051 -9964002 + AT_rich Low_complexity Low_complexity 1 49 0 5 721 22 0 0 0 chr3R 17946308 17946330 -9958723 + AT_rich Low_complexity Low_complexity 1 22 0 5 721 300 53 0 0 chr3R 17949528 17949566 -9955487 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 721 198 71 0 0 chr3R 17950483 17950511 -9954542 + (CAG)n Simple_repeat Simple_repeat 2 29 0 5 721 292 194 62 31 chr3R 17950923 17951019 -9954034 + ROO_I LTR Pao 650 748 -7508 5 721 309 26 0 0 chr3R 17951881 17951919 -9953134 + (CAG)n Simple_repeat Simple_repeat 1 38 0 5 721 35 0 0 0 chr3R 17954739 17954774 -9950279 + AT_rich Low_complexity Low_complexity 1 35 0 5 722 28 29 0 0 chr3R 17956919 17956954 -9948099 + AT_rich Low_complexity Low_complexity 1 35 0 5 722 26 30 0 0 chr3R 17958137 17958170 -9946883 + AT_rich Low_complexity Low_complexity 1 33 0 5 722 21 95 0 0 chr3R 17959066 17959129 -9945924 + AT_rich Low_complexity Low_complexity 1 63 0 5 722 219 170 0 0 chr3R 17963801 17963848 -9941205 + (ATG)n Simple_repeat Simple_repeat 1 47 0 5 722 188 200 0 18 chr3R 17963963 17964019 -9941034 + CT-rich Low_complexity Low_complexity 1 55 0 5 722 381 156 0 0 chr3R 17965790 17965867 -9939186 + (TTG)n Simple_repeat Simple_repeat 2 78 0 5 722 219 125 0 0 chr3R 17965980 17966020 -9939033 + (TTTTTG)n Simple_repeat Simple_repeat 4 43 0 5 722 207 200 29 44 chr3R 17966847 17966915 -9938138 + A-rich Low_complexity Low_complexity 5 71 0 5 722 23 0 0 0 chr3R 17967221 17967244 -9937809 + AT_rich Low_complexity Low_complexity 1 23 0 5 722 213 108 0 0 chr3R 17968597 17968634 -9936419 + (A)n Simple_repeat Simple_repeat 1 37 0 5 722 28 29 0 0 chr3R 17968893 17968928 -9936125 + AT_rich Low_complexity Low_complexity 1 35 0 5 722 23 0 0 0 chr3R 17970108 17970131 -9934922 + AT_rich Low_complexity Low_complexity 1 23 0 5 722 205 233 22 0 chr3R 17971086 17971176 -9933877 + (CAG)n Simple_repeat Simple_repeat 3 94 0 5 722 21 0 0 0 chr3R 17971967 17971988 -9933065 + AT_rich Low_complexity Low_complexity 1 21 0 5 722 201 121 0 0 chr3R 17976074 17976107 -9928946 + (CAGTT)n Simple_repeat Simple_repeat 4 36 0 5 722 22 0 0 0 chr3R 17976286 17976308 -9928745 + AT_rich Low_complexity Low_complexity 1 22 0 5 722 207 0 0 0 chr3R 17976507 17976530 -9928523 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 722 230 149 12 86 chr3R 17977204 17977285 -9927768 - ROO_I LTR Pao -7527 729 655 5 722 225 0 0 0 chr3R 17979208 17979233 -9925820 + (CAG)n Simple_repeat Simple_repeat 2 26 0 5 722 49 18 0 0 chr3R 17981248 17981304 -9923749 + AT_rich Low_complexity Low_complexity 1 56 0 5 722 21 36 0 0 chr3R 17982047 17982075 -9922978 + AT_rich Low_complexity Low_complexity 1 28 0 5 722 274 164 44 15 chr3R 17983866 17983934 -9921119 + (CAG)n Simple_repeat Simple_repeat 1 70 0 5 722 219 69 0 0 chr3R 17984559 17984588 -9920465 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 722 226 174 32 85 chr3R 17984634 17984728 -9920325 + ROO_I LTR Pao 639 727 -7529 5 722 206 273 0 15 chr3R 17985658 17985725 -9919328 + (CTG)n Simple_repeat Simple_repeat 3 68 0 5 722 207 114 0 0 chr3R 17986308 17986343 -9918710 + (T)n Simple_repeat Simple_repeat 1 35 0 5 722 201 129 0 0 chr3R 17987022 17987053 -9918000 + (CTG)n Simple_repeat Simple_repeat 3 33 0 5 722 26 0 0 0 chr3R 17988418 17988444 -9916609 + AT_rich Low_complexity Low_complexity 1 26 0 5 722 192 77 0 0 chr3R 17990020 17990046 -9915007 + (TATG)n Simple_repeat Simple_repeat 3 28 0 5 722 225 65 0 0 chr3R 17990605 17990636 -9914417 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 722 219 114 0 0 chr3R 17991825 17991860 -9913193 + (TTA)n Simple_repeat Simple_repeat 2 36 0 5 722 288 102 0 0 chr3R 17992098 17992147 -9912906 + (GATTG)n Simple_repeat Simple_repeat 5 53 0 5 722 180 77 0 0 chr3R 17992336 17992362 -9912691 + (ACTG)n Simple_repeat Simple_repeat 1 26 0 5 722 24 53 0 0 chr3R 17992850 17992888 -9912165 + AT_rich Low_complexity Low_complexity 1 38 0 5 722 21 57 0 0 chr3R 17993775 17993810 -9911243 + AT_rich Low_complexity Low_complexity 1 35 0 5 722 216 97 0 0 chr3R 17994217 17994248 -9910805 + (CAG)n Simple_repeat Simple_repeat 1 31 0 5 722 194 91 30 0 chr3R 17996321 17996354 -9908699 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 722 22 35 0 0 chr3R 17996755 17996784 -9908269 + AT_rich Low_complexity Low_complexity 1 29 0 5 722 205 157 78 0 chr3R 17997622 17997673 -9907380 + A-rich Low_complexity Low_complexity 4 58 0 5 722 252 100 0 0 chr3R 17998914 17998954 -9906099 + (CTCA)n Simple_repeat Simple_repeat 3 42 0 5 722 206 105 0 26 chr3R 18002207 18002246 -9902807 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 5 722 212 116 0 44 chr3R 18002897 18002942 -9902111 + (CAT)n Simple_repeat Simple_repeat 1 43 0 5 722 213 205 0 0 chr3R 18005446 18005485 -9899568 + CT-rich Low_complexity Low_complexity 2 40 0 5 722 295 156 143 0 chr3R 18006182 18006259 -9898794 - ROO_I LTR Pao -7517 739 652 5 722 22 0 0 0 chr3R 18008236 18008258 -9896795 + AT_rich Low_complexity Low_complexity 1 22 0 5 722 261 98 0 0 chr3R 18012005 18012046 -9893007 + (CAG)n Simple_repeat Simple_repeat 1 41 0 5 722 247 243 0 0 chr3R 18013167 18013237 -9891816 + (TGG)n Simple_repeat Simple_repeat 3 72 0 5 722 249 196 0 0 chr3R 18014526 18014577 -9890476 + (GCTG)n Simple_repeat Simple_repeat 4 54 0 5 722 24 0 0 0 chr3R 18015120 18015144 -9889909 + AT_rich Low_complexity Low_complexity 1 24 0 5 722 25 0 0 0 chr3R 18017699 18017724 -9887329 + AT_rich Low_complexity Low_complexity 1 25 0 5 722 195 69 0 0 chr3R 18018933 18018962 -9886091 + (A)n Simple_repeat Simple_repeat 1 29 0 5 722 234 91 0 0 chr3R 18020992 18021025 -9884028 + (CACAA)n Simple_repeat Simple_repeat 2 34 0 5 722 231 146 0 0 chr3R 18021062 18021103 -9883950 + (ATTCG)n Simple_repeat Simple_repeat 2 42 0 5 722 254 260 0 0 chr3R 18021208 18021281 -9883772 + A-rich Low_complexity Low_complexity 1 73 0 5 722 31 0 0 0 chr3R 18024255 18024286 -9880767 + AT_rich Low_complexity Low_complexity 1 31 0 5 722 213 241 0 17 chr3R 18025961 18026020 -9879033 + (CAGTT)n Simple_repeat Simple_repeat 2 59 0 5 722 243 88 0 0 chr3R 18026130 18026164 -9878889 + (CTG)n Simple_repeat Simple_repeat 3 36 0 5 722 192 97 0 0 chr3R 18026406 18026437 -9878616 + (CAACT)n Simple_repeat Simple_repeat 1 31 0 5 722 216 200 0 0 chr3R 18030728 18030773 -9874280 + T-rich Low_complexity Low_complexity 1 45 0 5 722 245 180 0 20 chr3R 18031318 18031369 -9873684 + (CCCGAA)n Simple_repeat Simple_repeat 6 55 0 5 722 180 0 0 0 chr3R 18031543 18031563 -9873490 + (T)n Simple_repeat Simple_repeat 1 20 0 5 722 191 125 25 0 chr3R 18033286 18033326 -9871727 + (GAAA)n Simple_repeat Simple_repeat 4 44 0 5 722 25 0 0 0 chr3R 18035437 18035462 -9869591 + AT_rich Low_complexity Low_complexity 1 25 0 5 722 264 100 0 0 chr3R 18036178 18036218 -9868835 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 722 278 197 0 0 chr3R 18039825 18039901 -9865152 + ROO_I LTR Pao 654 729 -7527 5 722 219 114 0 0 chr3R 18042762 18042797 -9862256 + (A)n Simple_repeat Simple_repeat 1 35 0 5 722 23 54 0 0 chr3R 18042828 18042865 -9862188 + AT_rich Low_complexity Low_complexity 1 37 0 5 722 24 0 0 0 chr3R 18043137 18043161 -9861892 + AT_rich Low_complexity Low_complexity 1 24 0 5 722 192 40 0 0 chr3R 18044039 18044064 -9860989 + (CAT)n Simple_repeat Simple_repeat 3 27 0 5 722 249 242 0 52 chr3R 18044998 18045094 -9859959 + (TGAG)n Simple_repeat Simple_repeat 1 91 0 5 722 22 0 0 0 chr3R 18045375 18045397 -9859656 + AT_rich Low_complexity Low_complexity 1 22 0 5 722 228 86 0 0 chr3R 18046318 18046353 -9858700 + (GA)n Simple_repeat Simple_repeat 1 35 0 5 722 35 24 0 0 chr3R 18046692 18046734 -9858319 + AT_rich Low_complexity Low_complexity 1 42 0 5 722 21 36 0 0 chr3R 18052205 18052233 -9852820 + AT_rich Low_complexity Low_complexity 1 28 0 5 722 22 0 0 0 chr3R 18054359 18054381 -9850672 + AT_rich Low_complexity Low_complexity 1 22 0 5 722 202 150 25 0 chr3R 18056744 18056784 -9848269 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 722 213 139 0 0 chr3R 18059841 18059884 -9845169 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 722 4084 0 0 2 chr3R 18060458 18060912 -9844141 - POGO DNA Pogo 0 2121 1669 5 722 7486 1 0 1 chr3R 18060916 18061722 -9843331 - POGO DNA Pogo -1316 805 1 5 722 4022 0 0 0 chr3R 18065268 18065696 -9839357 - ROO_LTR LTR Pao 0 428 1 5 722 73942 0 14 0 chr3R 18065696 18073842 -9831211 - ROO_I LTR Pao 0 8256 1 5 722 4022 0 0 0 chr3R 18073842 18074270 -9830783 - ROO_LTR LTR Pao 0 428 1 5 722 243 0 0 0 chr3R 18074520 18074547 -9830506 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 722 223 186 0 0 chr3R 18075982 18076025 -9829028 + T-rich Low_complexity Low_complexity 1 43 0 5 722 195 69 0 0 chr3R 18079204 18079233 -9825820 + (CTG)n Simple_repeat Simple_repeat 1 29 0 5 722 192 125 0 0 chr3R 18081127 18081159 -9823894 + (A)n Simple_repeat Simple_repeat 1 32 0 5 722 217 236 0 18 chr3R 18081343 18081399 -9823654 + (CAG)n Simple_repeat Simple_repeat 2 56 0 5 722 231 88 0 0 chr3R 18083326 18083360 -9821693 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 722 186 103 0 0 chr3R 18083555 18083584 -9821469 + (A)n Simple_repeat Simple_repeat 1 29 0 5 722 189 74 0 0 chr3R 18085752 18085779 -9819274 + (T)n Simple_repeat Simple_repeat 1 27 0 5 722 33 0 0 0 chr3R 18086898 18086931 -9818122 + AT_rich Low_complexity Low_complexity 1 33 0 5 723 24 0 0 0 chr3R 18090089 18090113 -9814940 + AT_rich Low_complexity Low_complexity 1 24 0 5 723 267 31 0 0 chr3R 18091729 18091761 -9813292 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 723 200 115 47 47 chr3R 18096860 18096924 -9808129 + (CAAAC)n Simple_repeat Simple_repeat 1 64 0 5 723 240 246 0 16 chr3R 18098820 18098882 -9806171 + (ATG)n Simple_repeat Simple_repeat 1 61 0 5 723 22 56 0 0 chr3R 18102900 18102936 -9802117 + AT_rich Low_complexity Low_complexity 1 36 0 5 723 189 94 0 0 chr3R 18103264 18103296 -9801757 + (A)n Simple_repeat Simple_repeat 1 32 0 5 723 211 157 19 19 chr3R 18103538 18103590 -9801463 + (CGG)n Simple_repeat Simple_repeat 2 53 0 5 723 256 191 11 11 chr3R 18104166 18104256 -9800797 + (CAG)n Simple_repeat Simple_repeat 1 90 0 5 723 186 71 0 0 chr3R 18105667 18105695 -9799358 + (CAG)n Simple_repeat Simple_repeat 1 28 0 5 723 269 156 43 43 chr3R 18107292 18107386 -9797667 + ROO_I LTR Pao 639 732 -7524 5 723 180 0 0 0 chr3R 18111920 18111940 -9793113 + (T)n Simple_repeat Simple_repeat 1 20 0 5 723 21 36 0 0 chr3R 18113271 18113299 -9791754 + AT_rich Low_complexity Low_complexity 1 28 0 5 723 207 100 0 0 chr3R 18114208 18114238 -9790815 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 5 723 26 64 0 0 chr3R 18121069 18121116 -9783937 + AT_rich Low_complexity Low_complexity 1 47 0 5 723 29 0 0 0 chr3R 18128085 18128114 -9776939 + AT_rich Low_complexity Low_complexity 1 29 0 5 723 217 226 0 0 chr3R 18132077 18132130 -9772923 + (CCA)n Simple_repeat Simple_repeat 1 53 0 5 723 264 264 0 14 chr3R 18132507 18132580 -9772473 + (TA)n Simple_repeat Simple_repeat 1 72 0 5 723 24 0 0 0 chr3R 18132783 18132807 -9772246 + AT_rich Low_complexity Low_complexity 1 24 0 5 723 25 0 0 0 chr3R 18134667 18134692 -9770361 + AT_rich Low_complexity Low_complexity 1 25 0 5 723 23 0 0 0 chr3R 18134900 18134923 -9770130 + AT_rich Low_complexity Low_complexity 1 23 0 5 723 222 62 0 0 chr3R 18134983 18135015 -9770038 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 723 200 143 24 0 chr3R 18135476 18135518 -9769535 + (TATG)n Simple_repeat Simple_repeat 2 44 0 5 723 24 32 0 0 chr3R 18135721 18135752 -9769301 + AT_rich Low_complexity Low_complexity 1 31 0 5 723 26 0 0 0 chr3R 18135805 18135831 -9769222 + AT_rich Low_complexity Low_complexity 1 26 0 5 723 253 274 0 0 chr3R 18136834 18136907 -9768146 + (TG)n Simple_repeat Simple_repeat 2 74 0 5 723 27 0 0 0 chr3R 18139610 18139637 -9765416 + AT_rich Low_complexity Low_complexity 1 27 0 5 723 255 31 0 0 chr3R 18143106 18143138 -9761915 + (CATTG)n Simple_repeat Simple_repeat 2 33 0 5 723 198 150 0 0 chr3R 18147910 18147950 -9757103 + (CAACT)n Simple_repeat Simple_repeat 1 40 0 5 723 31 76 0 0 chr3R 18149226 18149292 -9755761 + AT_rich Low_complexity Low_complexity 1 66 0 5 723 231 61 0 0 chr3R 18149951 18149984 -9755069 + (CAGAG)n Simple_repeat Simple_repeat 5 37 0 5 723 216 182 0 0 chr3R 18150458 18150502 -9754551 + (CAG)n Simple_repeat Simple_repeat 2 45 0 5 723 23 0 0 0 chr3R 18150722 18150745 -9754308 + AT_rich Low_complexity Low_complexity 1 23 0 5 723 37 23 0 0 chr3R 18150856 18150900 -9754153 + AT_rich Low_complexity Low_complexity 1 44 0 5 723 235 204 0 18 chr3R 18151021 18151076 -9753977 - ROO_I LTR Pao -7528 728 675 5 723 24 0 0 0 chr3R 18151482 18151506 -9753547 + AT_rich Low_complexity Low_complexity 1 24 0 5 723 21 0 0 0 chr3R 18157536 18157557 -9747496 + AT_rich Low_complexity Low_complexity 1 21 0 5 723 21 82 0 0 chr3R 18160965 18161014 -9744039 + AT_rich Low_complexity Low_complexity 1 49 0 5 723 291 85 0 0 chr3R 18162683 18162730 -9742323 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 723 194 105 0 26 chr3R 18165624 18165663 -9739390 + (GAATG)n Simple_repeat Simple_repeat 5 42 0 5 723 338 276 38 19 chr3R 18167459 18167618 -9737435 - ROO_I LTR Pao -7477 779 618 5 723 23 54 0 0 chr3R 18170371 18170408 -9734645 + AT_rich Low_complexity Low_complexity 1 37 0 5 723 23 0 0 0 chr3R 18172906 18172929 -9732124 + AT_rich Low_complexity Low_complexity 1 23 0 5 723 492 143 0 0 chr3R 18174027 18174104 -9730949 + DNAREP1_DM LINE Penelope 1 77 -517 5 723 357 179 0 0 chr3R 18174158 18174214 -9730839 + DNAREP1_DM LINE Penelope 434 489 -105 5 723 23 0 0 0 chr3R 18181945 18181968 -9723085 + AT_rich Low_complexity Low_complexity 1 23 0 5 723 185 125 0 77 chr3R 18182843 18182895 -9722158 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 723 189 0 0 0 chr3R 18185498 18185519 -9719534 + (TCCC)n Simple_repeat Simple_repeat 2 22 0 5 723 23 33 0 0 chr3R 18185885 18185915 -9719138 + AT_rich Low_complexity Low_complexity 1 30 0 5 723 25 0 0 0 chr3R 18188444 18188469 -9716584 + AT_rich Low_complexity Low_complexity 1 25 0 5 723 28 0 0 0 chr3R 18205126 18205154 -9699899 + AT_rich Low_complexity Low_complexity 1 28 0 5 723 25 0 0 0 chr3R 18206897 18206922 -9698131 + AT_rich Low_complexity Low_complexity 1 25 0 5 723 264 100 0 0 chr3R 18213796 18213836 -9691217 + (TTCGG)n Simple_repeat Simple_repeat 3 42 0 5 723 27 49 0 0 chr3R 18214742 18214783 -9690270 + AT_rich Low_complexity Low_complexity 1 41 0 5 723 199 100 0 74 chr3R 18215604 18215658 -9689395 + A-rich Low_complexity Low_complexity 6 55 0 5 724 238 255 0 0 chr3R 18220971 18221018 -9684035 + (CCCGAA)n Simple_repeat Simple_repeat 2 48 0 5 724 23 0 0 0 chr3R 18222382 18222405 -9682648 + AT_rich Low_complexity Low_complexity 1 23 0 5 724 23 0 0 0 chr3R 18224693 18224716 -9680337 + AT_rich Low_complexity Low_complexity 1 23 0 5 724 210 37 0 0 chr3R 18226576 18226603 -9678450 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 724 34 24 0 0 chr3R 18227833 18227874 -9677179 + AT_rich Low_complexity Low_complexity 1 41 0 5 724 33 0 0 0 chr3R 18230102 18230135 -9674918 + AT_rich Low_complexity Low_complexity 1 33 0 5 724 22 0 0 0 chr3R 18231159 18231181 -9673872 + AT_rich Low_complexity Low_complexity 1 22 0 5 724 214 351 0 0 chr3R 18238899 18238973 -9666080 + (CGG)n Simple_repeat Simple_repeat 3 76 0 5 724 724 267 56 99 chr3R 18241937 18242240 -9662813 - P_DG DNA P -160 2728 2439 5 724 357 233 0 0 chr3R 18242274 18242347 -9662706 - P_DG DNA P -410 2478 2406 5 724 189 121 0 0 chr3R 18244977 18245010 -9660043 + (TTC)n Simple_repeat Simple_repeat 2 34 0 5 724 21 36 0 0 chr3R 18246699 18246727 -9658326 + AT_rich Low_complexity Low_complexity 1 28 0 5 724 23 33 0 0 chr3R 18246933 18246963 -9658090 + AT_rich Low_complexity Low_complexity 1 30 0 5 724 267 79 0 0 chr3R 18251452 18251490 -9653563 + (CTG)n Simple_repeat Simple_repeat 3 40 0 5 724 246 105 0 0 chr3R 18251703 18251741 -9653312 + (CTG)n Simple_repeat Simple_repeat 1 38 0 5 724 267 200 0 0 chr3R 18252174 18252249 -9652804 - ROO_I LTR Pao -7539 717 643 5 724 222 286 9 9 chr3R 18252960 18253073 -9651980 + (TGG)n Simple_repeat Simple_repeat 3 115 0 5 724 201 203 26 51 chr3R 18254829 18254907 -9650146 + T-rich Low_complexity Low_complexity 1 76 0 5 724 220 200 0 0 chr3R 18255724 18255769 -9649284 + (CAGT)n Simple_repeat Simple_repeat 1 45 0 5 724 216 67 0 0 chr3R 18256301 18256331 -9648722 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 724 22 0 0 0 chr3R 18260405 18260427 -9644626 + AT_rich Low_complexity Low_complexity 1 22 0 5 724 200 111 0 27 chr3R 18261824 18261861 -9643192 + (CAAAC)n Simple_repeat Simple_repeat 1 36 0 5 724 22 56 0 0 chr3R 18264764 18264800 -9640253 + AT_rich Low_complexity Low_complexity 1 36 0 5 724 23 0 0 0 chr3R 18264820 18264843 -9640210 + AT_rich Low_complexity Low_complexity 1 23 0 5 724 28 0 0 0 chr3R 18272259 18272287 -9632766 + AT_rich Low_complexity Low_complexity 1 28 0 5 724 5243 34 130 1 chr3R 18276322 18277031 -9628022 + FB4_DM DNA Tc1 1 800 -3289 5 724 1838 0 0 0 chr3R 18277291 18277505 -9627548 + FB4_DM DNA Tc1 2977 3190 -899 5 724 3762 17 2 4 chr3R 18277366 18277840 -9627213 - FB4_DM DNA Tc1 -3079 1010 538 5 724 10818 8 1 48 chr3R 18277505 18278900 -9626153 + FB4_DM DNA Tc1 2760 4089 0 5 724 189 107 0 0 chr3R 18284417 18284445 -9620608 + (CCG)n Simple_repeat Simple_repeat 2 29 0 5 724 201 94 0 0 chr3R 18284815 18284847 -9620206 + (CAG)n Simple_repeat Simple_repeat 1 32 0 5 724 30 59 0 0 chr3R 18287871 18287922 -9617131 + AT_rich Low_complexity Low_complexity 1 51 0 5 724 28 48 0 0 chr3R 18290145 18290187 -9614866 + AT_rich Low_complexity Low_complexity 1 42 0 5 724 23 33 0 0 chr3R 18293979 18294009 -9611044 + AT_rich Low_complexity Low_complexity 1 30 0 5 724 220 120 20 20 chr3R 18299538 18299589 -9605464 + (CCAA)n Simple_repeat Simple_repeat 3 53 0 5 724 21 36 0 0 chr3R 18301784 18301812 -9603241 + AT_rich Low_complexity Low_complexity 1 28 0 5 724 243 190 0 0 chr3R 18302523 18302581 -9602472 + CT-rich Low_complexity Low_complexity 2 59 0 5 724 260 102 20 0 chr3R 18302733 18302782 -9602271 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 724 22 0 0 0 chr3R 18306315 18306337 -9598716 + AT_rich Low_complexity Low_complexity 1 22 0 5 724 219 88 0 0 chr3R 18307292 18307326 -9597727 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 724 243 161 0 0 chr3R 18307776 18307832 -9597221 + (CAA)n Simple_repeat Simple_repeat 1 56 0 5 724 209 100 0 48 chr3R 18308625 18308667 -9596386 + (CAG)n Simple_repeat Simple_repeat 2 41 0 5 724 201 74 0 0 chr3R 18310447 18310474 -9594579 + (TAA)n Simple_repeat Simple_repeat 2 28 0 5 724 186 103 0 0 chr3R 18311390 18311419 -9593634 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 724 244 0 56 0 chr3R 18311597 18311633 -9593420 + (CAGTA)n Simple_repeat Simple_repeat 5 42 0 5 724 248 215 12 37 chr3R 18311644 18311726 -9593327 + (CATA)n Simple_repeat Simple_repeat 2 81 0 5 724 192 40 0 0 chr3R 18312487 18312512 -9592541 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 724 42 36 0 0 chr3R 18317399 18317455 -9587598 + AT_rich Low_complexity Low_complexity 1 56 0 5 724 22 56 0 0 chr3R 18318076 18318112 -9586941 + AT_rich Low_complexity Low_complexity 1 36 0 5 724 22 70 0 0 chr3R 18318933 18318976 -9586077 + AT_rich Low_complexity Low_complexity 1 43 0 5 724 22 0 0 0 chr3R 18319445 18319467 -9585586 + AT_rich Low_complexity Low_complexity 1 22 0 5 724 234 0 0 0 chr3R 18320656 18320682 -9584371 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 724 222 62 0 0 chr3R 18323169 18323201 -9581852 + (CACTC)n Simple_repeat Simple_repeat 3 34 0 5 724 201 74 0 0 chr3R 18324961 18324988 -9580065 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 724 23 0 0 0 chr3R 18327388 18327411 -9577642 + AT_rich Low_complexity Low_complexity 1 23 0 5 724 180 200 0 0 chr3R 18331063 18331113 -9573940 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 724 28 29 0 0 chr3R 18331350 18331385 -9573668 + AT_rich Low_complexity Low_complexity 1 35 0 5 724 23 33 0 0 chr3R 18331812 18331842 -9573211 + AT_rich Low_complexity Low_complexity 1 30 0 5 724 207 209 0 0 chr3R 18332515 18332558 -9572495 + (TATATG)n Simple_repeat Simple_repeat 1 43 0 5 724 252 59 0 0 chr3R 18339397 18339431 -9565622 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 724 22 0 0 0 chr3R 18343051 18343073 -9561980 + AT_rich Low_complexity Low_complexity 1 22 0 5 724 24 32 0 0 chr3R 18345762 18345793 -9559260 + AT_rich Low_complexity Low_complexity 1 31 0 5 725 208 278 14 14 chr3R 18353556 18353629 -9551424 + (CATATA)n Simple_repeat Simple_repeat 1 73 0 5 725 381 58 0 0 chr3R 18359719 18359771 -9545282 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 725 32 26 0 0 chr3R 18361330 18361369 -9543684 + AT_rich Low_complexity Low_complexity 1 39 0 5 725 200 209 47 0 chr3R 18362701 18362744 -9542309 + (CATATA)n Simple_repeat Simple_repeat 6 50 0 5 725 180 217 0 0 chr3R 18363718 18363764 -9541289 + (CAT)n Simple_repeat Simple_repeat 1 46 0 5 725 23 0 0 0 chr3R 18364813 18364836 -9540217 + AT_rich Low_complexity Low_complexity 1 23 0 5 725 28 61 0 0 chr3R 18368600 18368649 -9536404 + AT_rich Low_complexity Low_complexity 1 49 0 5 725 33 0 0 0 chr3R 18374132 18374165 -9530888 + AT_rich Low_complexity Low_complexity 1 33 0 5 725 183 100 0 0 chr3R 18376150 18376180 -9528873 + (A)n Simple_repeat Simple_repeat 1 30 0 5 725 210 37 0 0 chr3R 18376685 18376712 -9528341 + (A)n Simple_repeat Simple_repeat 1 27 0 5 725 28 0 0 0 chr3R 18377304 18377332 -9527721 + AT_rich Low_complexity Low_complexity 1 28 0 5 725 21 0 0 0 chr3R 18377582 18377603 -9527450 + AT_rich Low_complexity Low_complexity 1 21 0 5 725 23 0 0 0 chr3R 18378012 18378035 -9527018 + AT_rich Low_complexity Low_complexity 1 23 0 5 725 213 65 0 0 chr3R 18378953 18378984 -9526069 + (ATG)n Simple_repeat Simple_repeat 1 31 0 5 725 23 0 0 0 chr3R 18379552 18379575 -9525478 + AT_rich Low_complexity Low_complexity 1 23 0 5 725 23 0 0 0 chr3R 18381063 18381086 -9523967 + AT_rich Low_complexity Low_complexity 1 23 0 5 725 22 0 0 0 chr3R 18386322 18386344 -9518709 + AT_rich Low_complexity Low_complexity 1 22 0 5 725 219 170 0 0 chr3R 18388189 18388236 -9516817 + (TATAG)n Simple_repeat Simple_repeat 5 51 0 5 725 213 273 0 0 chr3R 18388359 18388414 -9516639 + (TCTCTG)n Simple_repeat Simple_repeat 6 60 0 5 725 255 103 0 0 chr3R 18390091 18390130 -9514923 + (TATG)n Simple_repeat Simple_repeat 2 40 0 5 725 24 32 0 0 chr3R 18390738 18390769 -9514284 + AT_rich Low_complexity Low_complexity 1 31 0 5 725 21 89 0 0 chr3R 18390802 18390858 -9514195 + AT_rich Low_complexity Low_complexity 1 56 0 5 725 26 0 0 0 chr3R 18394711 18394737 -9510316 + AT_rich Low_complexity Low_complexity 1 26 0 5 725 203 147 0 0 chr3R 18395571 18395605 -9509448 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 725 181 95 79 0 chr3R 18397260 18397323 -9507730 + (TA)n Simple_repeat Simple_repeat 2 69 0 5 725 206 152 65 0 chr3R 18399879 18399925 -9505128 + (CGAAA)n Simple_repeat Simple_repeat 2 50 0 5 725 341 131 0 16 chr3R 18402718 18402780 -9502273 + (CCAA)n Simple_repeat Simple_repeat 2 62 0 5 725 276 111 0 0 chr3R 18405317 18405362 -9499691 + (CAG)n Simple_repeat Simple_repeat 3 47 0 5 725 232 192 19 0 chr3R 18413738 18413790 -9491263 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 725 210 250 0 0 chr3R 18414875 18414919 -9490134 + (TATG)n Simple_repeat Simple_repeat 1 44 0 5 725 29 0 0 0 chr3R 18415941 18415970 -9489083 + AT_rich Low_complexity Low_complexity 1 29 0 5 725 222 236 55 0 chr3R 18416245 18416300 -9488753 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 5 725 191 114 29 0 chr3R 18416895 18416930 -9488123 + (TATG)n Simple_repeat Simple_repeat 3 38 0 5 725 248 250 0 0 chr3R 18417758 18417814 -9487239 + (TTG)n Simple_repeat Simple_repeat 3 58 0 5 725 216 97 0 0 chr3R 18418708 18418739 -9486314 + (CAGTT)n Simple_repeat Simple_repeat 5 35 0 5 725 189 195 0 0 chr3R 18419790 18419831 -9485222 + (CATCT)n Simple_repeat Simple_repeat 3 43 0 5 725 207 184 0 0 chr3R 18420413 18420451 -9484602 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 725 300 102 0 0 chr3R 18422298 18422347 -9482706 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 725 213 154 0 0 chr3R 18425182 18425221 -9479832 + (CCGAA)n Simple_repeat Simple_repeat 3 41 0 5 725 232 182 21 74 chr3R 18426406 18426501 -9478552 + ROO_I LTR Pao 649 738 -7518 5 725 212 298 0 0 chr3R 18426594 18426651 -9478402 + (CAG)n Simple_repeat Simple_repeat 2 58 0 5 725 234 180 0 0 chr3R 18426671 18426721 -9478332 + GA-rich Low_complexity Low_complexity 2 51 0 5 725 253 254 0 0 chr3R 18426812 18426875 -9478178 + (CGA)n Simple_repeat Simple_repeat 2 64 0 5 725 201 186 27 54 chr3R 18427786 18427860 -9477193 + CT-rich Low_complexity Low_complexity 2 73 0 5 725 219 204 0 0 chr3R 18427990 18428044 -9477009 + (CAG)n Simple_repeat Simple_repeat 3 56 0 5 725 412 146 0 80 chr3R 18428647 18428759 -9476294 + ROO_I LTR Pao 641 743 -7513 5 725 207 260 0 0 chr3R 18429040 18429090 -9475963 + (TGG)n Simple_repeat Simple_repeat 2 51 0 5 725 237 205 12 37 chr3R 18431245 18431326 -9473727 + (CAG)n Simple_repeat Simple_repeat 1 79 0 5 725 26 30 0 0 chr3R 18433715 18433748 -9471305 + AT_rich Low_complexity Low_complexity 1 33 0 5 725 208 137 0 38 chr3R 18434449 18434502 -9470551 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 725 21 57 0 0 chr3R 18439267 18439302 -9465751 + AT_rich Low_complexity Low_complexity 1 35 0 5 725 233 208 0 0 chr3R 18443175 18443223 -9461830 + (TGG)n Simple_repeat Simple_repeat 3 50 0 5 725 261 0 0 0 chr3R 18449129 18449158 -9455895 + (CTG)n Simple_repeat Simple_repeat 1 29 0 5 725 222 37 0 0 chr3R 18449158 18449185 -9455868 + (ATG)n Simple_repeat Simple_repeat 1 27 0 5 725 225 154 0 0 chr3R 18449818 18449857 -9455196 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 725 180 0 0 0 chr3R 18450422 18450442 -9454611 + (A)n Simple_repeat Simple_repeat 1 20 0 5 725 213 265 0 0 chr3R 18451929 18451978 -9453075 + GA-rich Low_complexity Low_complexity 5 53 0 5 725 189 0 0 0 chr3R 18452587 18452608 -9452445 + (GA)n Simple_repeat Simple_repeat 1 21 0 5 725 183 100 0 0 chr3R 18454952 18454982 -9450071 + (CGAAT)n Simple_repeat Simple_repeat 2 31 0 5 725 29 70 0 0 chr3R 18455068 18455125 -9449928 + AT_rich Low_complexity Low_complexity 1 57 0 5 725 186 43 0 0 chr3R 18458984 18459007 -9446046 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 725 22 35 0 0 chr3R 18461609 18461638 -9443415 + AT_rich Low_complexity Low_complexity 1 29 0 5 725 228 67 0 0 chr3R 18468143 18468173 -9436880 + (TA)n Simple_repeat Simple_repeat 1 30 0 5 725 285 51 0 0 chr3R 18469748 18469787 -9435266 + (TTA)n Simple_repeat Simple_repeat 2 40 0 5 725 41 36 0 0 chr3R 18470518 18470573 -9434480 + AT_rich Low_complexity Low_complexity 1 55 0 5 725 261 0 0 0 chr3R 18472897 18472926 -9432127 + (T)n Simple_repeat Simple_repeat 1 29 0 5 725 265 111 0 45 chr3R 18478069 18478135 -9426918 + (CAG)n Simple_repeat Simple_repeat 3 65 0 5 725 204 135 0 0 chr3R 18479868 18479905 -9425148 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 725 33 90 0 0 chr3R 18480835 18480924 -9424129 + AT_rich Low_complexity Low_complexity 1 89 0 5 726 205 162 0 0 chr3R 18481707 18481744 -9423309 + (TGGG)n Simple_repeat Simple_repeat 2 38 0 5 726 206 271 0 17 chr3R 18482608 18482668 -9422385 + (CGG)n Simple_repeat Simple_repeat 3 61 0 5 726 223 186 0 0 chr3R 18482624 18482667 -9422386 + (TGG)n Simple_repeat Simple_repeat 3 45 0 5 726 22 0 0 0 chr3R 18482954 18482976 -9422077 + AT_rich Low_complexity Low_complexity 1 22 0 5 726 198 103 0 0 chr3R 18483854 18483883 -9421170 + (CAG)n Simple_repeat Simple_repeat 1 29 0 5 726 393 86 0 0 chr3R 18484043 18484101 -9420952 + (CAG)n Simple_repeat Simple_repeat 3 60 0 5 726 399 119 0 0 chr3R 18484997 18485064 -9419989 + (TGGA)n Simple_repeat Simple_repeat 2 68 0 5 726 21 0 0 0 chr3R 18485536 18485557 -9419496 + AT_rich Low_complexity Low_complexity 1 21 0 5 726 26 0 0 0 chr3R 18486693 18486719 -9418334 + AT_rich Low_complexity Low_complexity 1 26 0 5 726 226 50 24 24 chr3R 18487208 18487249 -9417804 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 726 203 171 0 0 chr3R 18487518 18487553 -9417500 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 726 24 0 0 0 chr3R 18496541 18496565 -9408488 + AT_rich Low_complexity Low_complexity 1 24 0 5 726 216 158 0 0 chr3R 18501957 18501995 -9403058 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 726 213 132 0 0 chr3R 18506326 18506364 -9398689 + (CAG)n Simple_repeat Simple_repeat 1 38 0 5 726 24 0 0 0 chr3R 18510703 18510727 -9394326 + AT_rich Low_complexity Low_complexity 1 24 0 5 726 29 28 0 0 chr3R 18516119 18516155 -9388898 + AT_rich Low_complexity Low_complexity 1 36 0 5 726 25 0 0 0 chr3R 18523686 18523711 -9381342 + AT_rich Low_complexity Low_complexity 1 25 0 5 726 23 0 0 0 chr3R 18528597 18528620 -9376433 + AT_rich Low_complexity Low_complexity 1 23 0 5 726 21 0 0 0 chr3R 18529984 18530005 -9375048 + AT_rich Low_complexity Low_complexity 1 21 0 5 726 229 145 57 14 chr3R 18536939 18537009 -9368044 + (TTGTG)n Simple_repeat Simple_repeat 5 77 0 5 726 283 248 27 9 chr3R 18537293 18537403 -9367650 + (TA)n Simple_repeat Simple_repeat 2 113 0 5 726 252 0 0 0 chr3R 18543863 18543891 -9361162 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 726 219 222 0 0 chr3R 18545918 18545972 -9359081 + (CTG)n Simple_repeat Simple_repeat 1 54 0 5 726 289 230 0 13 chr3R 18546360 18546435 -9358618 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 726 42 20 0 0 chr3R 18547001 18547050 -9358003 + AT_rich Low_complexity Low_complexity 1 49 0 5 726 214 231 0 19 chr3R 18550020 18550073 -9354980 + (TAA)n Simple_repeat Simple_repeat 1 52 0 5 726 21 36 0 0 chr3R 18550386 18550414 -9354639 + AT_rich Low_complexity Low_complexity 1 28 0 5 726 24 77 0 0 chr3R 18552232 18552284 -9352769 + AT_rich Low_complexity Low_complexity 1 52 0 5 726 210 150 0 0 chr3R 18553030 18553070 -9351983 + (CAG)n Simple_repeat Simple_repeat 3 42 0 5 726 183 42 0 0 chr3R 18553437 18553461 -9351592 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 726 183 162 0 0 chr3R 18554713 18554750 -9350303 + A-rich Low_complexity Low_complexity 1 37 0 5 726 189 0 0 0 chr3R 18556165 18556186 -9348867 + (CAGT)n Simple_repeat Simple_repeat 2 22 0 5 726 24 32 0 0 chr3R 18556920 18556951 -9348102 + AT_rich Low_complexity Low_complexity 1 31 0 5 726 294 50 0 0 chr3R 18557414 18557454 -9347599 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 726 26 0 0 0 chr3R 18557680 18557706 -9347347 + AT_rich Low_complexity Low_complexity 1 26 0 5 726 189 0 0 0 chr3R 18558333 18558354 -9346699 + (TAA)n Simple_repeat Simple_repeat 3 23 0 5 726 1447 99 201 61 chr3R 18558803 18559082 -9345971 + PROTOP_B DNA P 1 318 -835 5 726 24 67 0 0 chr3R 18573389 18573434 -9331619 + AT_rich Low_complexity Low_complexity 1 45 0 5 726 186 43 0 0 chr3R 18576063 18576086 -9328967 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 5 726 212 260 0 0 chr3R 18577119 18577169 -9327884 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 726 231 229 0 0 chr3R 18582737 18582785 -9322268 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 5 726 195 114 0 0 chr3R 18587269 18587304 -9317749 + (AATAG)n Simple_repeat Simple_repeat 1 35 0 5 726 25 0 0 0 chr3R 18600381 18600406 -9304647 + AT_rich Low_complexity Low_complexity 1 25 0 5 726 220 220 0 0 chr3R 18603631 18603681 -9301372 + (TAGA)n Simple_repeat Simple_repeat 2 51 0 5 726 213 39 0 0 chr3R 18607319 18607345 -9297708 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 726 30 0 0 0 chr3R 18608537 18608567 -9296486 + AT_rich Low_complexity Low_complexity 1 30 0 5 726 225 204 0 0 chr3R 18610658 18610712 -9294341 + ROO_I LTR Pao 678 731 -7525 5 726 277 263 0 0 chr3R 18610843 18610919 -9294134 + (CAG)n Simple_repeat Simple_repeat 3 78 0 5 726 261 119 0 0 chr3R 18611002 18611044 -9294009 + (CAG)n Simple_repeat Simple_repeat 3 44 0 5 726 215 274 0 0 chr3R 18611052 18611114 -9293939 + (CAA)n Simple_repeat Simple_repeat 3 64 0 5 727 237 108 0 0 chr3R 18612894 18612931 -9292122 + (CAG)n Simple_repeat Simple_repeat 1 37 0 5 727 230 305 11 0 chr3R 18613102 18613197 -9291856 + (CAG)n Simple_repeat Simple_repeat 2 97 0 5 727 242 95 0 23 chr3R 18613504 18613547 -9291506 + (CAG)n Simple_repeat Simple_repeat 3 44 0 5 727 219 167 0 0 chr3R 18613947 18613989 -9291064 + (CAG)n Simple_repeat Simple_repeat 1 42 0 5 727 327 25 0 0 chr3R 18618847 18618887 -9286166 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 727 211 232 24 24 chr3R 18619672 18619756 -9285297 + A-rich Low_complexity Low_complexity 6 89 0 5 727 21 36 0 0 chr3R 18620015 18620043 -9285010 + AT_rich Low_complexity Low_complexity 1 28 0 5 727 273 109 0 0 chr3R 18620399 18620445 -9284608 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 727 29 0 0 0 chr3R 18620827 18620856 -9284197 + AT_rich Low_complexity Low_complexity 1 29 0 5 727 234 171 0 0 chr3R 18624687 18624757 -9280296 + (CA)n Simple_repeat Simple_repeat 1 70 0 5 727 36 53 0 0 chr3R 18625076 18625133 -9279920 + AT_rich Low_complexity Low_complexity 1 57 0 5 727 25 0 0 0 chr3R 18625870 18625895 -9279158 + AT_rich Low_complexity Low_complexity 1 25 0 5 727 249 286 0 0 chr3R 18626846 18626930 -9278123 + (CCCA)n Simple_repeat Simple_repeat 2 85 0 5 727 23 33 0 0 chr3R 18627489 18627519 -9277534 + AT_rich Low_complexity Low_complexity 1 30 0 5 727 24 32 0 0 chr3R 18627854 18627885 -9277168 + AT_rich Low_complexity Low_complexity 1 31 0 5 727 189 0 0 0 chr3R 18629069 18629090 -9275963 + (CAG)n Simple_repeat Simple_repeat 3 23 0 5 727 398 235 0 17 chr3R 18631231 18631348 -9273705 + ROO_I LTR Pao 629 743 -7513 5 727 189 121 0 0 chr3R 18634377 18634410 -9270643 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 727 213 121 0 0 chr3R 18636451 18636484 -9268569 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 727 231 204 0 0 chr3R 18641129 18641183 -9263870 + (CTG)n Simple_repeat Simple_repeat 1 54 0 5 727 249 83 0 0 chr3R 18643128 18643164 -9261889 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 727 212 262 0 0 chr3R 18643502 18643563 -9261490 + A-rich Low_complexity Low_complexity 1 61 0 5 727 214 191 0 0 chr3R 18646940 18646982 -9258071 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 727 186 103 0 0 chr3R 18647758 18647787 -9257266 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 727 294 50 0 0 chr3R 18648378 18648418 -9256635 + (GA)n Simple_repeat Simple_repeat 2 41 0 5 727 189 0 0 0 chr3R 18649270 18649291 -9255762 + (A)n Simple_repeat Simple_repeat 1 21 0 5 727 212 158 0 0 chr3R 18650644 18650682 -9254371 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 727 25 31 0 0 chr3R 18653769 18653801 -9251252 + AT_rich Low_complexity Low_complexity 1 32 0 5 727 22 0 0 0 chr3R 18654431 18654453 -9250600 + AT_rich Low_complexity Low_complexity 1 22 0 5 727 24 0 0 0 chr3R 18655476 18655500 -9249553 + AT_rich Low_complexity Low_complexity 1 24 0 5 727 210 71 0 0 chr3R 18657107 18657135 -9247918 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 727 180 0 0 0 chr3R 18659330 18659350 -9245703 + (C)n Simple_repeat Simple_repeat 1 20 0 5 727 22 0 0 0 chr3R 18659871 18659893 -9245160 + AT_rich Low_complexity Low_complexity 1 22 0 5 727 276 53 0 0 chr3R 18660907 18660945 -9244108 + (TTA)n Simple_repeat Simple_repeat 2 39 0 5 727 23 0 0 0 chr3R 18663656 18663679 -9241374 + AT_rich Low_complexity Low_complexity 1 23 0 5 727 21 36 0 0 chr3R 18665352 18665380 -9239673 + AT_rich Low_complexity Low_complexity 1 28 0 5 727 303 28 0 0 chr3R 18668054 18668090 -9236963 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 727 28 0 0 0 chr3R 18669821 18669849 -9235204 + AT_rich Low_complexity Low_complexity 1 28 0 5 727 213 197 0 0 chr3R 18671339 18671400 -9233653 + T-rich Low_complexity Low_complexity 1 61 0 5 727 183 114 0 0 chr3R 18671473 18671508 -9233545 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 727 22 0 0 0 chr3R 18672124 18672146 -9232907 + AT_rich Low_complexity Low_complexity 1 22 0 5 727 243 61 0 0 chr3R 18673829 18673862 -9231191 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 727 21 36 0 0 chr3R 18676746 18676774 -9228279 + AT_rich Low_complexity Low_complexity 1 28 0 5 727 26 0 0 0 chr3R 18678409 18678435 -9226618 + AT_rich Low_complexity Low_complexity 1 26 0 5 727 23 78 0 0 chr3R 18679716 18679767 -9225286 + AT_rich Low_complexity Low_complexity 1 51 0 5 727 228 175 0 0 chr3R 18680747 18680810 -9224243 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 727 219 229 0 0 chr3R 18683942 18683990 -9221063 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 727 208 213 0 47 chr3R 18685553 18685617 -9219436 + (TGGG)n Simple_repeat Simple_repeat 2 62 0 5 727 31 58 0 0 chr3R 18688950 18689002 -9216051 + AT_rich Low_complexity Low_complexity 1 52 0 5 727 198 118 0 0 chr3R 18689684 18689718 -9215335 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 727 201 121 0 0 chr3R 18691213 18691246 -9213807 + (CAT)n Simple_repeat Simple_repeat 1 33 0 5 727 21 0 0 0 chr3R 18691572 18691593 -9213460 + AT_rich Low_complexity Low_complexity 1 21 0 5 727 29 0 0 0 chr3R 18692289 18692318 -9212735 + AT_rich Low_complexity Low_complexity 1 29 0 5 727 21 0 0 0 chr3R 18693002 18693023 -9212030 + AT_rich Low_complexity Low_complexity 1 21 0 5 727 208 222 0 0 chr3R 18694071 18694125 -9210928 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 727 321 82 0 0 chr3R 18694358 18694407 -9210646 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 727 30 45 0 0 chr3R 18695249 18695293 -9209760 + AT_rich Low_complexity Low_complexity 1 44 0 5 727 201 245 0 0 chr3R 18695455 18695508 -9209545 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 727 246 128 0 0 chr3R 18696047 18696086 -9208967 + (CAG)n Simple_repeat Simple_repeat 3 41 0 5 727 213 94 0 0 chr3R 18696240 18696272 -9208781 + (CATTC)n Simple_repeat Simple_repeat 3 34 0 5 727 216 0 0 0 chr3R 18696908 18696932 -9208121 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 727 21 0 0 0 chr3R 18697238 18697259 -9207794 + AT_rich Low_complexity Low_complexity 1 21 0 5 727 22 0 0 0 chr3R 18698797 18698819 -9206234 + AT_rich Low_complexity Low_complexity 1 22 0 5 727 261 0 0 0 chr3R 18699903 18699932 -9205121 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 5 727 288 91 0 0 chr3R 18702856 18702900 -9202153 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 727 222 62 0 0 chr3R 18705040 18705072 -9199981 + (CTG)n Simple_repeat Simple_repeat 2 33 0 5 727 204 40 0 0 chr3R 18705384 18705409 -9199644 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 727 18631 1 0 0 chr3R 18706975 18708994 -9196059 + DOC LINE Jockey 1 2019 -2706 5 727 14768 2 0 0 chr3R 18708988 18710590 -9194463 + DOC LINE Jockey 3124 4725 0 5 727 243 0 0 0 chr3R 18710590 18710617 -9194436 + (A)n Simple_repeat Simple_repeat 1 27 0 5 727 189 178 0 0 chr3R 18710832 18710877 -9194176 + (TGGA)n Simple_repeat Simple_repeat 3 47 0 5 727 243 0 0 0 chr3R 18715019 18715046 -9190007 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 727 192 97 0 0 chr3R 18715205 18715236 -9189817 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 5 727 186 118 0 0 chr3R 18715480 18715514 -9189539 + (TCTA)n Simple_repeat Simple_repeat 3 36 0 5 727 25 31 0 0 chr3R 18716559 18716591 -9188462 + AT_rich Low_complexity Low_complexity 1 32 0 5 727 183 42 0 0 chr3R 18717318 18717342 -9187711 + (TTTTTA)n Simple_repeat Simple_repeat 1 24 0 5 727 195 114 0 0 chr3R 18718087 18718122 -9186931 + (GGA)n Simple_repeat Simple_repeat 3 37 0 5 727 246 62 0 0 chr3R 18718605 18718637 -9186416 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 5 727 214 306 0 0 chr3R 18721535 18721620 -9183433 + A-rich Low_complexity Low_complexity 1 85 0 5 727 255 254 0 0 chr3R 18723627 18723686 -9181367 + A-rich Low_complexity Low_complexity 6 64 0 5 727 201 171 0 0 chr3R 18725758 18725793 -9179260 + T-rich Low_complexity Low_complexity 1 35 0 5 727 207 156 0 0 chr3R 18725937 18725969 -9179084 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 727 25 31 0 0 chr3R 18728752 18728784 -9176269 + AT_rich Low_complexity Low_complexity 1 32 0 5 727 216 0 0 0 chr3R 18731411 18731435 -9173618 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 727 264 227 0 15 chr3R 18733265 18733332 -9171721 + (CA)n Simple_repeat Simple_repeat 1 66 0 5 727 273 57 0 0 chr3R 18735781 18735816 -9169237 + (TTA)n Simple_repeat Simple_repeat 2 36 0 5 727 207 277 11 46 chr3R 18737324 18737411 -9167642 + CT-rich Low_complexity Low_complexity 3 86 0 5 727 21 0 0 0 chr3R 18740629 18740650 -9164403 + AT_rich Low_complexity Low_complexity 1 21 0 5 727 198 71 0 0 chr3R 18740981 18741009 -9164044 + (TAAAAA)n Simple_repeat Simple_repeat 3 30 0 5 727 28 29 0 0 chr3R 18741828 18741863 -9163190 + AT_rich Low_complexity Low_complexity 1 35 0 5 727 192 40 0 0 chr3R 18742636 18742661 -9162392 + (A)n Simple_repeat Simple_repeat 1 25 0 5 727 23 33 0 0 chr3R 18743200 18743230 -9161823 + AT_rich Low_complexity Low_complexity 1 30 0 5 728 226 153 0 40 chr3R 18743727 18743802 -9161251 + (CAG)n Simple_repeat Simple_repeat 3 74 0 5 728 222 105 0 0 chr3R 18746952 18746990 -9158063 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 728 183 42 0 0 chr3R 18747747 18747771 -9157282 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 728 201 121 0 0 chr3R 18755428 18755461 -9149592 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 5 728 21 0 0 0 chr3R 18756003 18756024 -9149029 + AT_rich Low_complexity Low_complexity 1 21 0 5 728 21 36 0 0 chr3R 18762140 18762168 -9142885 + AT_rich Low_complexity Low_complexity 1 28 0 5 728 237 33 0 0 chr3R 18763519 18763549 -9141504 + (CCTTG)n Simple_repeat Simple_repeat 3 32 0 5 728 24 0 0 0 chr3R 18766816 18766840 -9138213 + AT_rich Low_complexity Low_complexity 1 24 0 5 728 216 0 0 0 chr3R 18768848 18768872 -9136181 + (T)n Simple_repeat Simple_repeat 1 24 0 5 728 246 105 0 0 chr3R 18777717 18777755 -9127298 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 728 205 191 0 0 chr3R 18779235 18779277 -9125776 + (TTTAA)n Simple_repeat Simple_repeat 4 45 0 5 728 225 94 0 0 chr3R 18781000 18781032 -9124021 + (CAAGC)n Simple_repeat Simple_repeat 2 33 0 5 728 183 80 0 0 chr3R 18781259 18781284 -9123769 + (TTTCG)n Simple_repeat Simple_repeat 2 26 0 5 728 204 159 0 22 chr3R 18782688 18782733 -9122320 + (TTCTG)n Simple_repeat Simple_repeat 2 45 0 5 728 216 200 0 0 chr3R 18782933 18782978 -9122075 + (CAT)n Simple_repeat Simple_repeat 3 47 0 5 728 180 163 0 0 chr3R 18783550 18783593 -9121460 + (ATGGTG)n Simple_repeat Simple_repeat 4 46 0 5 728 202 55 0 53 chr3R 18788842 18788880 -9116173 + (CAGT)n Simple_repeat Simple_repeat 1 36 0 5 728 183 80 0 0 chr3R 18789598 18789623 -9115430 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 728 180 0 0 0 chr3R 18792032 18792052 -9113001 + (T)n Simple_repeat Simple_repeat 1 20 0 5 728 180 0 0 0 chr3R 18802873 18802893 -9102160 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 728 29 28 0 0 chr3R 18803842 18803878 -9101175 + AT_rich Low_complexity Low_complexity 1 36 0 5 728 189 94 0 0 chr3R 18805208 18805240 -9099813 + (GATTG)n Simple_repeat Simple_repeat 2 33 0 5 728 21 0 0 0 chr3R 18806140 18806161 -9098892 + AT_rich Low_complexity Low_complexity 1 21 0 5 728 248 77 0 25 chr3R 18810736 18810776 -9094277 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 728 240 138 111 12 chr3R 18817195 18817276 -9087777 - ROO_I LTR Pao -7515 741 653 5 728 21 0 0 0 chr3R 18818742 18818763 -9086290 + AT_rich Low_complexity Low_complexity 1 21 0 5 728 23 0 0 0 chr3R 18818880 18818903 -9086150 + AT_rich Low_complexity Low_complexity 1 23 0 5 728 43 47 0 0 chr3R 18823498 18823562 -9081491 + AT_rich Low_complexity Low_complexity 1 64 0 5 728 26 30 0 0 chr3R 18824798 18824831 -9080222 + AT_rich Low_complexity Low_complexity 1 33 0 5 728 21 0 0 0 chr3R 18825132 18825153 -9079900 + AT_rich Low_complexity Low_complexity 1 21 0 5 728 205 200 0 0 chr3R 18825211 18825251 -9079802 + (ATG)n Simple_repeat Simple_repeat 1 40 0 5 728 21 0 0 0 chr3R 18825890 18825911 -9079142 + AT_rich Low_complexity Low_complexity 1 21 0 5 728 207 114 0 0 chr3R 18826835 18826870 -9078183 + (CTG)n Simple_repeat Simple_repeat 3 37 0 5 728 206 156 22 0 chr3R 18829324 18829369 -9075684 + (CATA)n Simple_repeat Simple_repeat 3 48 0 5 728 180 77 0 0 chr3R 18830387 18830413 -9074640 + (GGAAA)n Simple_repeat Simple_repeat 4 29 0 5 728 201 94 0 0 chr3R 18830684 18830716 -9074337 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 728 194 91 0 29 chr3R 18834658 18834692 -9070361 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 5 728 248 91 0 22 chr3R 18838053 18838098 -9066955 + (CAGC)n Simple_repeat Simple_repeat 1 44 0 5 728 25 0 0 0 chr3R 18838819 18838844 -9066209 + AT_rich Low_complexity Low_complexity 1 25 0 5 728 29 0 0 0 chr3R 18843419 18843448 -9061605 + AT_rich Low_complexity Low_complexity 1 29 0 5 728 227 259 0 0 chr3R 18845264 18845322 -9059731 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 728 490 65 16 0 chr3R 18846586 18846648 -9058405 + DNAREP1_DM LINE Penelope 6 68 -526 5 728 489 18 0 0 chr3R 18846652 18846708 -9058345 + DNAREP1_DM LINE Penelope 539 594 0 5 728 28 29 0 0 chr3R 18846881 18846916 -9058137 + AT_rich Low_complexity Low_complexity 1 35 0 5 728 281 347 14 20 chr3R 18847574 18847721 -9057332 + (CTG)n Simple_repeat Simple_repeat 3 148 0 5 728 363 89 0 0 chr3R 18847849 18847905 -9057148 + (CTG)n Simple_repeat Simple_repeat 3 58 0 5 728 243 0 0 0 chr3R 18850275 18850302 -9054751 + (CATAC)n Simple_repeat Simple_repeat 2 28 0 5 728 246 247 0 33 chr3R 18851087 18851179 -9053874 - ROO_I LTR Pao -7523 733 645 5 728 31 0 0 0 chr3R 18853098 18853129 -9051924 + AT_rich Low_complexity Low_complexity 1 31 0 5 728 180 77 0 0 chr3R 18853880 18853906 -9051147 + (T)n Simple_repeat Simple_repeat 1 26 0 5 728 198 0 0 0 chr3R 18858176 18858198 -9046855 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 728 24 32 0 0 chr3R 18859598 18859629 -9045424 + AT_rich Low_complexity Low_complexity 1 31 0 5 728 22 35 0 0 chr3R 18862777 18862806 -9042247 + AT_rich Low_complexity Low_complexity 1 29 0 5 728 28 29 0 0 chr3R 18863377 18863412 -9041641 + AT_rich Low_complexity Low_complexity 1 35 0 5 728 222 37 0 0 chr3R 18868705 18868732 -9036321 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 728 240 250 0 0 chr3R 18869294 18869358 -9035695 + (TCCG)n Simple_repeat Simple_repeat 4 67 0 5 728 189 175 0 0 chr3R 18873008 18873048 -9032005 + A-rich Low_complexity Low_complexity 2 41 0 5 729 203 195 24 0 chr3R 18883325 18883366 -9021687 + (CAG)n Simple_repeat Simple_repeat 3 44 0 5 729 273 146 0 0 chr3R 18885648 18885696 -9019357 + (CTG)n Simple_repeat Simple_repeat 3 50 0 5 729 44 63 0 0 chr3R 18887095 18887174 -9017879 + AT_rich Low_complexity Low_complexity 1 79 0 5 729 21 0 0 0 chr3R 18893369 18893390 -9011663 + AT_rich Low_complexity Low_complexity 1 21 0 5 729 23 0 0 0 chr3R 18898226 18898249 -9006804 + AT_rich Low_complexity Low_complexity 1 23 0 5 729 21 0 0 0 chr3R 18899916 18899937 -9005116 + AT_rich Low_complexity Low_complexity 1 21 0 5 729 216 86 0 0 chr3R 18900174 18900209 -9004844 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 729 221 250 0 0 chr3R 18900393 18900441 -9004612 + (CAGAGA)n Simple_repeat Simple_repeat 4 51 0 5 729 209 114 0 28 chr3R 18901670 18901706 -9003347 + (TATG)n Simple_repeat Simple_repeat 4 38 0 5 729 233 307 0 9 chr3R 18901732 18901811 -9003242 + (TTG)n Simple_repeat Simple_repeat 2 80 0 5 729 375 78 0 0 chr3R 18901811 18901862 -9003191 + (CTG)n Simple_repeat Simple_repeat 1 51 0 5 729 233 307 0 9 chr3R 18901862 18901897 -9003156 + (TTG)n Simple_repeat Simple_repeat 3 37 0 5 729 22 0 0 0 chr3R 18902866 18902888 -9002165 + AT_rich Low_complexity Low_complexity 1 22 0 5 729 25 0 0 0 chr3R 18902976 18903001 -9002052 + AT_rich Low_complexity Low_complexity 1 25 0 5 729 183 162 0 0 chr3R 18904034 18904071 -9000982 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 729 225 192 0 19 chr3R 18904541 18904594 -9000459 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 729 213 94 0 0 chr3R 18907782 18907814 -8997239 + (CTTTG)n Simple_repeat Simple_repeat 4 35 0 5 729 180 163 0 0 chr3R 18908070 18908113 -8996940 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 729 266 222 0 0 chr3R 18909680 18909743 -8995310 + (TGG)n Simple_repeat Simple_repeat 3 65 0 5 729 225 132 0 0 chr3R 18910704 18910742 -8994311 + (TATG)n Simple_repeat Simple_repeat 4 41 0 5 729 186 103 0 0 chr3R 18929586 18929615 -8975438 + (CTATA)n Simple_repeat Simple_repeat 2 30 0 5 729 255 238 0 0 chr3R 18930876 18930939 -8974114 + A-rich Low_complexity Low_complexity 1 63 0 5 729 231 190 0 0 chr3R 18931774 18931832 -8973221 + CT-rich Low_complexity Low_complexity 2 59 0 5 729 189 0 0 0 chr3R 18934314 18934335 -8970718 + (T)n Simple_repeat Simple_repeat 1 21 0 5 729 229 232 24 35 chr3R 18936406 18936491 -8968562 + A-rich Low_complexity Low_complexity 2 85 0 5 729 222 37 0 0 chr3R 18939490 18939517 -8965536 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 729 207 100 0 0 chr3R 18956092 18956122 -8948931 + (CTG)n Simple_repeat Simple_repeat 3 32 0 5 729 231 146 0 0 chr3R 18956668 18956709 -8948344 + (TTG)n Simple_repeat Simple_repeat 1 41 0 5 729 240 35 0 0 chr3R 18956750 18956779 -8948274 + (CAA)n Simple_repeat Simple_repeat 1 29 0 5 729 240 200 0 0 chr3R 18956928 18956988 -8948065 + (CTG)n Simple_repeat Simple_repeat 3 62 0 5 729 233 182 0 18 chr3R 18961417 18961473 -8943580 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 729 21 0 0 0 chr3R 18963120 18963141 -8941912 + AT_rich Low_complexity Low_complexity 1 21 0 5 729 180 97 0 0 chr3R 18963547 18963578 -8941475 + (ATTTG)n Simple_repeat Simple_repeat 4 34 0 5 729 25 0 0 0 chr3R 18967297 18967322 -8937731 + AT_rich Low_complexity Low_complexity 1 25 0 5 729 189 74 0 0 chr3R 18967677 18967704 -8937349 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 729 200 111 28 0 chr3R 18968251 18968287 -8936766 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 729 21 0 0 0 chr3R 18970529 18970550 -8934503 + AT_rich Low_complexity Low_complexity 1 21 0 5 729 195 69 0 0 chr3R 18972779 18972808 -8932245 + (TTCGG)n Simple_repeat Simple_repeat 1 29 0 5 729 320 143 0 14 chr3R 18972932 18973003 -8932050 + (TTG)n Simple_repeat Simple_repeat 3 72 0 5 729 192 40 0 0 chr3R 18973711 18973736 -8931317 + (CAGT)n Simple_repeat Simple_repeat 1 25 0 5 729 37 52 0 0 chr3R 18974894 18974952 -8930101 + AT_rich Low_complexity Low_complexity 1 58 0 5 729 234 81 0 0 chr3R 18975270 18975307 -8929746 + (A)n Simple_repeat Simple_repeat 1 37 0 5 729 22 35 0 0 chr3R 18976509 18976538 -8928515 + AT_rich Low_complexity Low_complexity 1 29 0 5 729 23 0 0 0 chr3R 18977248 18977271 -8927782 + AT_rich Low_complexity Low_complexity 1 23 0 5 729 29 0 0 0 chr3R 18978982 18979011 -8926042 + AT_rich Low_complexity Low_complexity 1 29 0 5 729 252 309 0 0 chr3R 18982725 18982793 -8922260 + (CGTG)n Simple_repeat Simple_repeat 3 70 0 5 729 32 57 0 0 chr3R 18985114 18985167 -8919886 + AT_rich Low_complexity Low_complexity 1 53 0 5 729 21 36 0 0 chr3R 18989733 18989761 -8915292 + AT_rich Low_complexity Low_complexity 1 28 0 5 729 21 36 0 0 chr3R 18991865 18991893 -8913160 + AT_rich Low_complexity Low_complexity 1 28 0 5 729 21 36 0 0 chr3R 18992172 18992200 -8912853 + AT_rich Low_complexity Low_complexity 1 28 0 5 729 297 209 0 0 chr3R 18993891 18993982 -8911071 - ROO_I LTR Pao -7515 741 651 5 729 21 0 0 0 chr3R 18994865 18994886 -8910167 + AT_rich Low_complexity Low_complexity 1 21 0 5 729 30 0 0 0 chr3R 18999187 18999217 -8905836 + AT_rich Low_complexity Low_complexity 1 30 0 5 729 203 179 0 0 chr3R 19001185 19001224 -8903829 + CT-rich Low_complexity Low_complexity 1 39 0 5 729 23 0 0 0 chr3R 19001812 19001835 -8903218 + AT_rich Low_complexity Low_complexity 1 23 0 5 730 22 35 0 0 chr3R 19011992 19012021 -8893032 + AT_rich Low_complexity Low_complexity 1 29 0 5 730 219 254 0 0 chr3R 19012099 19012158 -8892895 + T-rich Low_complexity Low_complexity 1 59 0 5 730 22 35 0 0 chr3R 19012846 19012875 -8892178 + AT_rich Low_complexity Low_complexity 1 29 0 5 730 358 265 0 0 chr3R 19013178 19013280 -8891773 + (CTG)n Simple_repeat Simple_repeat 3 104 0 5 730 201 39 0 0 chr3R 19020439 19020465 -8884588 + (A)n Simple_repeat Simple_repeat 1 26 0 5 730 21 0 0 0 chr3R 19020681 19020702 -8884351 + AT_rich Low_complexity Low_complexity 1 21 0 5 730 21 57 0 0 chr3R 19021021 19021056 -8883997 + AT_rich Low_complexity Low_complexity 1 35 0 5 730 183 162 0 0 chr3R 19022867 19022904 -8882149 + (TATG)n Simple_repeat Simple_repeat 4 40 0 5 730 216 0 0 0 chr3R 19025015 19025039 -8880014 + (T)n Simple_repeat Simple_repeat 1 24 0 5 730 225 65 0 0 chr3R 19027023 19027054 -8877999 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 730 180 0 0 0 chr3R 19027235 19027255 -8877798 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 730 24 0 0 0 chr3R 19030641 19030665 -8874388 + AT_rich Low_complexity Low_complexity 1 24 0 5 730 183 80 0 0 chr3R 19031420 19031445 -8873608 + (CAGAC)n Simple_repeat Simple_repeat 3 27 0 5 730 195 42 0 0 chr3R 19031540 19031564 -8873489 + (T)n Simple_repeat Simple_repeat 1 24 0 5 730 272 83 21 0 chr3R 19033888 19033936 -8871117 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 730 22 0 0 0 chr3R 19035658 19035680 -8869373 + AT_rich Low_complexity Low_complexity 1 22 0 5 730 23 0 0 0 chr3R 19036135 19036158 -8868895 + AT_rich Low_complexity Low_complexity 1 23 0 5 730 186 43 0 0 chr3R 19038086 19038109 -8866944 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 730 259 193 0 43 chr3R 19039934 19040026 -8865027 - TABOR_I LTR Gypsy -15 6321 6234 5 730 234 0 0 0 chr3R 19044712 19044738 -8860315 + (TCC)n Simple_repeat Simple_repeat 1 26 0 5 730 189 0 0 0 chr3R 19044839 19044860 -8860193 + (TCC)n Simple_repeat Simple_repeat 3 23 0 5 730 234 174 0 0 chr3R 19047185 19047231 -8857822 + GA-rich Low_complexity Low_complexity 2 47 0 5 730 201 159 0 0 chr3R 19047415 19047459 -8857594 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 730 32 43 0 42 chr3R 19048137 19048209 -8856844 + AT_rich Low_complexity Low_complexity 1 69 0 5 730 21 0 0 0 chr3R 19051412 19051433 -8853620 + AT_rich Low_complexity Low_complexity 1 21 0 5 730 204 97 0 0 chr3R 19051942 19051973 -8853080 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 730 203 61 30 0 chr3R 19052528 19052561 -8852492 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 730 225 139 0 0 chr3R 19053498 19053541 -8851512 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 730 408 88 0 0 chr3R 19054227 19054284 -8850769 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 730 214 250 0 42 chr3R 19055792 19055863 -8849190 + (CATATA)n Simple_repeat Simple_repeat 4 71 0 5 730 22 0 0 0 chr3R 19064196 19064218 -8840835 + AT_rich Low_complexity Low_complexity 1 22 0 5 730 255 61 0 0 chr3R 19065518 19065551 -8839502 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 730 192 125 0 0 chr3R 19069507 19069539 -8835514 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 730 22 0 0 0 chr3R 19071493 19071515 -8833538 + AT_rich Low_complexity Low_complexity 1 22 0 5 730 23 33 0 0 chr3R 19075254 19075284 -8829769 + AT_rich Low_complexity Low_complexity 1 30 0 5 730 237 250 0 0 chr3R 19077413 19077469 -8827584 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 730 253 220 9 48 chr3R 19083934 19084039 -8821014 + T-rich Low_complexity Low_complexity 1 101 0 5 730 22 0 0 0 chr3R 19084932 19084954 -8820099 + AT_rich Low_complexity Low_complexity 1 22 0 5 730 215 197 16 16 chr3R 19087232 19087294 -8817759 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 730 201 175 0 24 chr3R 19087774 19087815 -8817238 + (TATATG)n Simple_repeat Simple_repeat 6 45 0 5 730 23 0 0 0 chr3R 19088376 19088399 -8816654 + AT_rich Low_complexity Low_complexity 1 23 0 5 730 204 40 0 0 chr3R 19088985 19089010 -8816043 + (TATG)n Simple_repeat Simple_repeat 2 26 0 5 730 232 232 0 0 chr3R 19091713 19091769 -8813284 + (CTG)n Simple_repeat Simple_repeat 1 56 0 5 730 24 32 0 0 chr3R 19091965 19091996 -8813057 + AT_rich Low_complexity Low_complexity 1 31 0 5 730 314 151 34 34 chr3R 19093280 19093369 -8811684 - ROO_I LTR Pao -7524 732 644 5 730 29 28 0 0 chr3R 19093589 19093625 -8811428 + AT_rich Low_complexity Low_complexity 1 36 0 5 730 21 36 0 0 chr3R 19094576 19094604 -8810449 + AT_rich Low_complexity Low_complexity 1 28 0 5 730 207 226 0 19 chr3R 19094942 19094996 -8810057 + (CAG)n Simple_repeat Simple_repeat 2 54 0 5 730 238 200 0 0 chr3R 19096235 19096300 -8808753 - ROO_I LTR Pao -7539 717 653 5 730 222 156 0 0 chr3R 19100208 19100253 -8804800 + (CTGTG)n Simple_repeat Simple_repeat 5 49 0 5 730 208 340 0 0 chr3R 19102044 19102138 -8802915 + T-rich Low_complexity Low_complexity 1 94 0 5 730 227 182 0 0 chr3R 19104661 19104705 -8800348 + CT-rich Low_complexity Low_complexity 2 45 0 5 730 33 85 0 0 chr3R 19106749 19106831 -8798222 + AT_rich Low_complexity Low_complexity 1 82 0 5 730 24 32 0 0 chr3R 19116745 19116776 -8788277 + AT_rich Low_complexity Low_complexity 1 31 0 5 730 208 216 0 0 chr3R 19118128 19118165 -8786888 + (TTG)n Simple_repeat Simple_repeat 1 37 0 5 730 251 151 45 34 chr3R 19118177 19118266 -8786787 - ROO_I LTR Pao -7523 733 644 5 730 263 303 0 27 chr3R 19118287 19118399 -8786654 + (CTG)n Simple_repeat Simple_repeat 1 109 0 5 730 28 48 0 0 chr3R 19118508 19118550 -8786503 + AT_rich Low_complexity Low_complexity 1 42 0 5 730 229 214 10 10 chr3R 19119853 19119952 -8785101 + (CTG)n Simple_repeat Simple_repeat 3 101 0 5 730 216 67 0 0 chr3R 19120009 19120039 -8785014 + (ATG)n Simple_repeat Simple_repeat 3 32 0 5 730 246 62 0 0 chr3R 19120115 19120147 -8784906 + (CTG)n Simple_repeat Simple_repeat 1 32 0 5 730 207 146 0 0 chr3R 19122112 19122153 -8782900 + (A)n Simple_repeat Simple_repeat 1 41 0 5 730 230 221 15 0 chr3R 19122770 19122838 -8782215 - ROO_I LTR Pao -7672 584 516 5 730 27 0 0 0 chr3R 19122844 19122871 -8782182 + AT_rich Low_complexity Low_complexity 1 27 0 5 730 203 245 0 36 chr3R 19124680 19124735 -8780318 + (TATG)n Simple_repeat Simple_repeat 3 55 0 5 730 228 111 0 0 chr3R 19125985 19126021 -8779032 + (CAA)n Simple_repeat Simple_repeat 3 38 0 5 730 26 0 0 0 chr3R 19130385 19130411 -8774642 + AT_rich Low_complexity Low_complexity 1 26 0 5 730 239 204 19 0 chr3R 19130521 19130575 -8774478 + (TTCA)n Simple_repeat Simple_repeat 2 56 0 5 730 22 35 0 0 chr3R 19131601 19131630 -8773423 + AT_rich Low_complexity Low_complexity 1 29 0 5 730 216 241 0 0 chr3R 19131776 19131830 -8773223 + A-rich Low_complexity Low_complexity 5 58 0 5 730 219 69 0 0 chr3R 19132544 19132573 -8772480 + (CCA)n Simple_repeat Simple_repeat 1 29 0 5 730 24 0 0 0 chr3R 19133456 19133480 -8771573 + AT_rich Low_complexity Low_complexity 1 24 0 5 730 273 98 0 0 chr3R 19134058 19134099 -8770954 + (ATG)n Simple_repeat Simple_repeat 3 43 0 5 730 219 250 0 40 chr3R 19134178 19134253 -8770800 + A-rich Low_complexity Low_complexity 2 73 0 5 730 207 0 0 0 chr3R 19134981 19135004 -8770049 + (ATG)n Simple_repeat Simple_repeat 3 25 0 5 731 219 238 0 59 chr3R 19140359 19140444 -8764609 + A-rich Low_complexity Low_complexity 3 82 0 5 731 28 29 0 0 chr3R 19142215 19142250 -8762803 + AT_rich Low_complexity Low_complexity 1 35 0 5 731 32 0 0 0 chr3R 19144085 19144117 -8760936 + AT_rich Low_complexity Low_complexity 1 32 0 5 731 246 85 31 78 chr3R 19144133 19144197 -8760856 + (TTTA)n Simple_repeat Simple_repeat 1 61 0 5 731 200 34 0 33 chr3R 19144571 19144601 -8760452 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 731 198 0 0 0 chr3R 19144948 19144970 -8760083 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 731 189 107 0 0 chr3R 19148883 19148911 -8756142 + (CAA)n Simple_repeat Simple_repeat 2 29 0 5 731 190 125 0 40 chr3R 19149520 19149570 -8755483 + (TTCG)n Simple_repeat Simple_repeat 1 48 0 5 731 297 118 0 0 chr3R 19150377 19150428 -8754625 + (CAG)n Simple_repeat Simple_repeat 3 53 0 5 731 192 77 0 0 chr3R 19152038 19152064 -8752989 + (ATG)n Simple_repeat Simple_repeat 1 26 0 5 731 26 30 0 0 chr3R 19157054 19157087 -8747966 + AT_rich Low_complexity Low_complexity 1 33 0 5 731 22 35 0 0 chr3R 19158811 19158840 -8746213 + AT_rich Low_complexity Low_complexity 1 29 0 5 731 221 234 0 0 chr3R 19158936 19158983 -8746070 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 731 225 214 22 56 chr3R 19159295 19159384 -8745669 + (GAGTG)n Simple_repeat Simple_repeat 3 88 0 5 731 216 273 8 83 chr3R 19159779 19159911 -8745142 + GA-rich Low_complexity Low_complexity 3 124 0 5 731 191 88 29 0 chr3R 19160534 19160568 -8744485 + (TTTCG)n Simple_repeat Simple_repeat 2 36 0 5 731 184 140 0 57 chr3R 19161056 19161109 -8743944 + T-rich Low_complexity Low_complexity 5 54 0 5 731 54 16 0 0 chr3R 19161449 19161510 -8743543 + AT_rich Low_complexity Low_complexity 1 61 0 5 731 210 71 0 0 chr3R 19162431 19162459 -8742594 + (CAG)n Simple_repeat Simple_repeat 1 28 0 5 731 244 259 0 0 chr3R 19162590 19162648 -8742405 + (TGAG)n Simple_repeat Simple_repeat 1 58 0 5 731 192 40 0 0 chr3R 19166502 19166527 -8738526 + (CCAA)n Simple_repeat Simple_repeat 4 28 0 5 731 231 294 0 14 chr3R 19167759 19167828 -8737225 + (TATATG)n Simple_repeat Simple_repeat 6 73 0 5 731 201 39 0 0 chr3R 19169145 19169171 -8735882 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 5 731 200 233 0 0 chr3R 19169435 19169478 -8735575 + (CAA)n Simple_repeat Simple_repeat 3 45 0 5 731 201 133 0 0 chr3R 19171958 19171988 -8733065 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 731 258 81 0 0 chr3R 19172330 19172367 -8732686 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 731 21 0 0 0 chr3R 19172508 19172529 -8732524 + AT_rich Low_complexity Low_complexity 1 21 0 5 731 34 24 0 0 chr3R 19172631 19172672 -8732381 + AT_rich Low_complexity Low_complexity 1 41 0 5 731 31 0 0 0 chr3R 19182929 19182960 -8722093 + AT_rich Low_complexity Low_complexity 1 31 0 5 731 27 87 0 0 chr3R 19184148 19184217 -8720836 + AT_rich Low_complexity Low_complexity 1 69 0 5 731 28 71 0 0 chr3R 19184374 19184430 -8720623 + AT_rich Low_complexity Low_complexity 1 56 0 5 731 228 307 0 0 chr3R 19186946 19187021 -8718032 + (CAG)n Simple_repeat Simple_repeat 3 77 0 5 731 21 0 0 0 chr3R 19187077 19187098 -8717955 + AT_rich Low_complexity Low_complexity 1 21 0 5 731 209 125 25 0 chr3R 19190127 19190167 -8714886 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 731 23 0 0 0 chr3R 19190487 19190510 -8714543 + AT_rich Low_complexity Low_complexity 1 23 0 5 731 307 157 43 33 chr3R 19193692 19193784 -8711269 + ROO_I LTR Pao 640 732 -7524 5 731 26 0 0 0 chr3R 19197311 19197337 -8707716 + AT_rich Low_complexity Low_complexity 1 26 0 5 731 21 36 0 0 chr3R 19198378 19198406 -8706647 + AT_rich Low_complexity Low_complexity 1 28 0 5 731 30 27 0 0 chr3R 19199930 19199967 -8705086 + AT_rich Low_complexity Low_complexity 1 37 0 5 731 207 69 0 0 chr3R 19200699 19200728 -8704325 + (TAA)n Simple_repeat Simple_repeat 3 31 0 5 731 24 67 0 0 chr3R 19200878 19200923 -8704130 + AT_rich Low_complexity Low_complexity 1 45 0 5 731 22 0 0 0 chr3R 19201379 19201401 -8703652 + AT_rich Low_complexity Low_complexity 1 22 0 5 731 21 71 0 0 chr3R 19211374 19211416 -8693637 + AT_rich Low_complexity Low_complexity 1 42 0 5 731 222 37 0 0 chr3R 19213121 19213148 -8691905 + (AACTG)n Simple_repeat Simple_repeat 1 27 0 5 731 21 0 0 0 chr3R 19213168 19213189 -8691864 + AT_rich Low_complexity Low_complexity 1 21 0 5 731 260 192 64 0 chr3R 19213565 19213643 -8691410 + (CAG)n Simple_repeat Simple_repeat 3 85 0 5 731 216 0 0 0 chr3R 19217293 19217317 -8687736 + (TAA)n Simple_repeat Simple_repeat 2 25 0 5 731 594 63 0 0 chr3R 19218385 19218464 -8686589 + (CTG)n Simple_repeat Simple_repeat 2 80 0 5 731 231 263 13 13 chr3R 19218946 19219023 -8686030 + (TTG)n Simple_repeat Simple_repeat 2 78 0 5 731 207 69 0 0 chr3R 19219081 19219110 -8685943 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 5 731 225 250 0 0 chr3R 19219696 19219760 -8685293 + A-rich Low_complexity Low_complexity 5 68 0 5 731 22 0 0 0 chr3R 19220754 19220776 -8684277 + AT_rich Low_complexity Low_complexity 1 22 0 5 731 33 25 0 0 chr3R 19222480 19222520 -8682533 + AT_rich Low_complexity Low_complexity 1 40 0 5 731 186 43 0 0 chr3R 19222619 19222642 -8682411 + (TATG)n Simple_repeat Simple_repeat 2 24 0 5 731 279 54 0 0 chr3R 19225142 19225179 -8679874 + (CAG)n Simple_repeat Simple_repeat 1 37 0 5 731 204 284 0 0 chr3R 19227292 19227366 -8677687 + A-rich Low_complexity Low_complexity 1 74 0 5 731 27 81 0 0 chr3R 19230849 19230911 -8674142 + AT_rich Low_complexity Low_complexity 1 62 0 5 731 306 155 14 27 chr3R 19234082 19234155 -8670898 - ROO_I LTR Pao -7530 726 655 5 731 325 95 32 0 chr3R 19234420 19234483 -8670570 + (TG)n Simple_repeat Simple_repeat 1 65 0 5 731 207 114 0 0 chr3R 19235628 19235663 -8669390 + (TCTG)n Simple_repeat Simple_repeat 4 38 0 5 731 192 97 0 0 chr3R 19235788 19235819 -8669234 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 731 240 111 0 0 chr3R 19236806 19236842 -8668211 + (CTG)n Simple_repeat Simple_repeat 1 36 0 5 731 408 118 0 0 chr3R 19237509 19237577 -8667476 + (CTG)n Simple_repeat Simple_repeat 1 68 0 5 731 22 35 0 0 chr3R 19237795 19237824 -8667229 + AT_rich Low_complexity Low_complexity 1 29 0 5 731 205 317 12 12 chr3R 19237893 19237976 -8667077 + (CCG)n Simple_repeat Simple_repeat 1 83 0 5 731 198 103 0 0 chr3R 19238068 19238097 -8666956 + (TTG)n Simple_repeat Simple_repeat 3 31 0 5 731 195 184 0 0 chr3R 19238787 19238825 -8666228 + (CTAG)n Simple_repeat Simple_repeat 2 39 0 5 731 41 36 0 0 chr3R 19239606 19239661 -8665392 + AT_rich Low_complexity Low_complexity 1 55 0 5 731 24 32 0 0 chr3R 19240202 19240233 -8664820 + AT_rich Low_complexity Low_complexity 1 31 0 5 731 267 237 0 0 chr3R 19243261 19243320 -8661733 + (CTG)n Simple_repeat Simple_repeat 1 59 0 5 731 189 107 0 0 chr3R 19243961 19243989 -8661064 + (CTG)n Simple_repeat Simple_repeat 1 28 0 5 731 192 152 0 0 chr3R 19244359 19244392 -8660661 + (CCG)n Simple_repeat Simple_repeat 1 33 0 5 731 222 211 19 0 chr3R 19245735 19245831 -8659222 + (CAG)n Simple_repeat Simple_repeat 1 97 0 5 731 189 0 0 0 chr3R 19248053 19248074 -8656979 + (CGAAT)n Simple_repeat Simple_repeat 3 23 0 5 731 255 31 0 0 chr3R 19252132 19252164 -8652889 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 731 211 293 12 12 chr3R 19253738 19253821 -8651232 + (CAA)n Simple_repeat Simple_repeat 2 84 0 5 731 22 0 0 0 chr3R 19254215 19254237 -8650816 + AT_rich Low_complexity Low_complexity 1 22 0 5 731 25 31 0 0 chr3R 19255599 19255631 -8649422 + AT_rich Low_complexity Low_complexity 1 32 0 5 731 28 0 0 0 chr3R 19258990 19259018 -8646035 + AT_rich Low_complexity Low_complexity 1 28 0 5 731 228 158 0 66 chr3R 19265523 19265584 -8639469 + ROO_I LTR Pao 664 720 -7536 5 732 228 35 0 0 chr3R 19269152 19269181 -8635872 + (CCTG)n Simple_repeat Simple_repeat 3 31 0 5 732 21 0 0 0 chr3R 19271369 19271390 -8633663 + AT_rich Low_complexity Low_complexity 1 21 0 5 732 183 186 0 0 chr3R 19273889 19273932 -8631121 + (ATTCG)n Simple_repeat Simple_repeat 3 45 0 5 732 180 77 0 0 chr3R 19275267 19275293 -8629760 + (TATG)n Simple_repeat Simple_repeat 3 28 0 5 732 24 53 0 0 chr3R 19275566 19275604 -8629449 + AT_rich Low_complexity Low_complexity 1 38 0 5 732 189 0 0 0 chr3R 19276429 19276450 -8628603 + (TCTG)n Simple_repeat Simple_repeat 4 24 0 5 732 227 238 0 45 chr3R 19277602 19277668 -8627385 + (CTG)n Simple_repeat Simple_repeat 2 64 0 5 732 40 0 0 0 chr3R 19278088 19278128 -8626925 + AT_rich Low_complexity Low_complexity 1 40 0 5 732 21 0 0 0 chr3R 19285503 19285524 -8619529 + AT_rich Low_complexity Low_complexity 1 21 0 5 732 189 94 0 0 chr3R 19285821 19285853 -8619200 + (A)n Simple_repeat Simple_repeat 1 32 0 5 732 209 114 0 28 chr3R 19286970 19287006 -8618047 + (CAG)n Simple_repeat Simple_repeat 3 37 0 5 732 29 28 0 0 chr3R 19287415 19287451 -8617602 + AT_rich Low_complexity Low_complexity 1 36 0 5 732 207 100 0 0 chr3R 19288923 19288953 -8616100 + (TCCA)n Simple_repeat Simple_repeat 3 32 0 5 732 189 0 0 0 chr3R 19292830 19292851 -8612202 + (T)n Simple_repeat Simple_repeat 1 21 0 5 732 23 0 0 0 chr3R 19293065 19293088 -8611965 + AT_rich Low_complexity Low_complexity 1 23 0 5 732 208 233 0 0 chr3R 19297114 19297174 -8607879 + T-rich Low_complexity Low_complexity 1 60 0 5 732 27 0 0 0 chr3R 19297503 19297530 -8607523 + AT_rich Low_complexity Low_complexity 1 27 0 5 732 280 204 9 104 chr3R 19298091 19298206 -8606847 + ROO_I LTR Pao 640 743 -7513 5 732 210 158 0 0 chr3R 19298289 19298327 -8606726 + (CAA)n Simple_repeat Simple_repeat 1 38 0 5 732 201 121 0 0 chr3R 19302400 19302433 -8602620 + (ACTG)n Simple_repeat Simple_repeat 3 35 0 5 732 240 245 0 0 chr3R 19303160 19303213 -8601840 + (CTG)n Simple_repeat Simple_repeat 1 53 0 5 732 21 36 0 0 chr3R 19303554 19303582 -8601471 + AT_rich Low_complexity Low_complexity 1 28 0 5 732 204 158 26 0 chr3R 19305418 19305456 -8599597 + (CAGAT)n Simple_repeat Simple_repeat 1 39 0 5 732 189 147 0 0 chr3R 19312870 19312904 -8592149 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 732 29 90 0 0 chr3R 19315162 19315240 -8589813 + AT_rich Low_complexity Low_complexity 1 78 0 5 732 231 88 0 0 chr3R 19316505 19316539 -8588514 + (CAAGC)n Simple_repeat Simple_repeat 4 37 0 5 732 31 58 0 0 chr3R 19317026 19317078 -8587975 + AT_rich Low_complexity Low_complexity 1 52 0 5 732 234 0 0 0 chr3R 19319324 19319350 -8585703 + (ACTG)n Simple_repeat Simple_repeat 1 26 0 5 732 41 36 0 0 chr3R 19321626 19321681 -8583372 + AT_rich Low_complexity Low_complexity 1 55 0 5 732 220 203 43 0 chr3R 19321986 19322055 -8582998 + A-rich Low_complexity Low_complexity 6 77 0 5 732 33 60 0 35 chr3R 19322319 19322406 -8582647 + AT_rich Low_complexity Low_complexity 1 84 0 5 732 189 0 0 0 chr3R 19325672 19325693 -8579360 + (A)n Simple_repeat Simple_repeat 1 21 0 5 732 207 214 24 0 chr3R 19328675 19328717 -8576336 + (ACTG)n Simple_repeat Simple_repeat 1 43 0 5 732 384 143 0 0 chr3R 19329379 19329463 -8575590 + (ACTG)n Simple_repeat Simple_repeat 3 86 0 5 732 192 158 0 0 chr3R 19330770 19330808 -8574245 + (TTTCG)n Simple_repeat Simple_repeat 5 42 0 5 732 26 30 0 0 chr3R 19334192 19334225 -8570828 + AT_rich Low_complexity Low_complexity 1 33 0 5 732 21 36 0 0 chr3R 19336477 19336505 -8568548 + AT_rich Low_complexity Low_complexity 1 28 0 5 732 22 56 0 0 chr3R 19337009 19337045 -8568008 + AT_rich Low_complexity Low_complexity 1 36 0 5 732 9202 27 10 7 chr3R 19341309 19342411 -8562642 - PROTOP_A DNA P 0 1105 1 5 732 22 35 0 0 chr3R 19342442 19342471 -8562582 + AT_rich Low_complexity Low_complexity 1 29 0 5 732 203 79 26 0 chr3R 19348731 19348769 -8556284 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 732 25 0 0 0 chr3R 19353720 19353745 -8551308 + AT_rich Low_complexity Low_complexity 1 25 0 5 732 28 29 0 0 chr3R 19355078 19355113 -8549940 + AT_rich Low_complexity Low_complexity 1 35 0 5 732 236 216 13 51 chr3R 19355999 19356077 -8548976 + GA-rich Low_complexity Low_complexity 1 75 0 5 732 198 171 0 0 chr3R 19356593 19356634 -8548419 + (ATTCG)n Simple_repeat Simple_repeat 3 43 0 5 732 34 42 0 0 chr3R 19362667 19362715 -8542338 + AT_rich Low_complexity Low_complexity 1 48 0 5 732 24 32 0 0 chr3R 19365209 19365240 -8539813 + AT_rich Low_complexity Low_complexity 1 31 0 5 732 192 77 0 0 chr3R 19376427 19376453 -8528600 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 732 32 26 0 0 chr3R 19377099 19377138 -8527915 + AT_rich Low_complexity Low_complexity 1 39 0 5 732 22 0 0 0 chr3R 19377221 19377243 -8527810 + AT_rich Low_complexity Low_complexity 1 22 0 5 732 27 87 0 0 chr3R 19381737 19381806 -8523247 + AT_rich Low_complexity Low_complexity 1 69 0 5 732 15973 1 0 0 chr3R 19384172 19385900 -8519153 - BARI_DM DNA Tc1 0 1728 1 5 732 207 69 0 0 chr3R 19395027 19395056 -8509997 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 732 21 0 0 0 chr3R 19395524 19395545 -8509508 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 204 67 0 0 chr3R 19399671 19399701 -8505352 + (GGA)n Simple_repeat Simple_repeat 2 31 0 5 733 23 0 0 0 chr3R 19400732 19400755 -8504298 + AT_rich Low_complexity Low_complexity 1 23 0 5 733 224 30 0 29 chr3R 19404764 19404798 -8500255 + (CAATT)n Simple_repeat Simple_repeat 3 35 0 5 733 21 0 0 0 chr3R 19407429 19407450 -8497603 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 192 152 0 0 chr3R 19408668 19408701 -8496352 + G-rich Low_complexity Low_complexity 52 84 0 5 733 25 31 0 0 chr3R 19410602 19410634 -8494419 + AT_rich Low_complexity Low_complexity 1 32 0 5 733 207 162 0 0 chr3R 19410848 19410885 -8494168 + (CAA)n Simple_repeat Simple_repeat 1 37 0 5 733 33 0 0 0 chr3R 19412024 19412057 -8492996 + AT_rich Low_complexity Low_complexity 1 33 0 5 733 46 33 0 0 chr3R 19414360 19414420 -8490633 + AT_rich Low_complexity Low_complexity 1 60 0 5 733 22 0 0 0 chr3R 19417180 19417202 -8487851 + AT_rich Low_complexity Low_complexity 1 22 0 5 733 41 36 0 0 chr3R 19417340 19417395 -8487658 + AT_rich Low_complexity Low_complexity 1 55 0 5 733 23 0 0 0 chr3R 19417629 19417652 -8487401 + AT_rich Low_complexity Low_complexity 1 23 0 5 733 528 208 163 0 chr3R 19418962 19419140 -8485913 - DNAREP1_DM LINE Penelope -2 592 386 5 733 22 80 0 0 chr3R 19419304 19419354 -8485699 + AT_rich Low_complexity Low_complexity 1 50 0 5 733 21 0 0 0 chr3R 19423691 19423712 -8481341 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 26 64 0 0 chr3R 19425020 19425067 -8479986 + AT_rich Low_complexity Low_complexity 1 47 0 5 733 183 80 0 0 chr3R 19425409 19425434 -8479619 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 733 22 0 0 0 chr3R 19426844 19426866 -8478187 + AT_rich Low_complexity Low_complexity 1 22 0 5 733 23 0 0 0 chr3R 19426930 19426953 -8478100 + AT_rich Low_complexity Low_complexity 1 23 0 5 733 25 0 0 0 chr3R 19427002 19427027 -8478026 + AT_rich Low_complexity Low_complexity 1 25 0 5 733 30 0 0 0 chr3R 19427994 19428024 -8477029 + AT_rich Low_complexity Low_complexity 1 30 0 5 733 21 0 0 0 chr3R 19428871 19428892 -8476161 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 22 0 0 0 chr3R 19431962 19431984 -8473069 + AT_rich Low_complexity Low_complexity 1 22 0 5 733 186 43 0 0 chr3R 19433218 19433241 -8471812 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 733 221 196 18 0 chr3R 19435083 19435139 -8469914 + (CAA)n Simple_repeat Simple_repeat 1 57 0 5 733 24 67 0 0 chr3R 19435194 19435239 -8469814 + AT_rich Low_complexity Low_complexity 1 45 0 5 733 21 36 0 0 chr3R 19435877 19435905 -8469148 + AT_rich Low_complexity Low_complexity 1 28 0 5 733 207 100 0 0 chr3R 19436624 19436654 -8468399 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 733 264 111 0 0 chr3R 19437477 19437522 -8467531 + (CATCC)n Simple_repeat Simple_repeat 4 48 0 5 733 24 32 0 0 chr3R 19438005 19438036 -8467017 + AT_rich Low_complexity Low_complexity 1 31 0 5 733 24 53 0 0 chr3R 19439621 19439659 -8465394 + AT_rich Low_complexity Low_complexity 1 38 0 5 733 24 32 0 0 chr3R 19439918 19439949 -8465104 + AT_rich Low_complexity Low_complexity 1 31 0 5 733 27 0 0 0 chr3R 19440417 19440444 -8464609 + AT_rich Low_complexity Low_complexity 1 27 0 5 733 31 0 0 0 chr3R 19443522 19443553 -8461500 + AT_rich Low_complexity Low_complexity 1 31 0 5 733 204 40 0 0 chr3R 19449620 19449645 -8455408 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 733 22 35 0 0 chr3R 19450764 19450793 -8454260 + AT_rich Low_complexity Low_complexity 1 29 0 5 733 328 171 0 13 chr3R 19453032 19453109 -8451944 - ROO_I LTR Pao -7519 737 662 5 733 201 132 0 0 chr3R 19457365 19457403 -8447650 + (CTG)n Simple_repeat Simple_repeat 2 39 0 5 733 218 182 0 0 chr3R 19458076 19458120 -8446933 + (CAACT)n Simple_repeat Simple_repeat 5 48 0 5 733 255 133 0 0 chr3R 19459956 19460001 -8445052 + (TCTA)n Simple_repeat Simple_repeat 3 47 0 5 733 204 40 0 0 chr3R 19460539 19460564 -8444489 + (CATTG)n Simple_repeat Simple_repeat 3 27 0 5 733 225 208 0 20 chr3R 19464526 19464575 -8440478 + (TTG)n Simple_repeat Simple_repeat 1 48 0 5 733 26 0 0 0 chr3R 19464924 19464950 -8440103 + AT_rich Low_complexity Low_complexity 1 26 0 5 733 189 121 0 0 chr3R 19468190 19468223 -8436830 + (CTG)n Simple_repeat Simple_repeat 3 35 0 5 733 192 97 0 0 chr3R 19470104 19470135 -8434918 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 5 733 21 0 0 0 chr3R 19470697 19470718 -8434335 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 217 159 0 22 chr3R 19473224 19473269 -8431784 + T-rich Low_complexity Low_complexity 2 45 0 5 733 24 0 0 0 chr3R 19473334 19473358 -8431695 + AT_rich Low_complexity Low_complexity 1 24 0 5 733 26 0 0 0 chr3R 19475257 19475283 -8429770 + AT_rich Low_complexity Low_complexity 1 26 0 5 733 23 33 0 0 chr3R 19478594 19478624 -8426429 + AT_rich Low_complexity Low_complexity 1 30 0 5 733 29 70 0 0 chr3R 19481762 19481819 -8423234 + AT_rich Low_complexity Low_complexity 1 57 0 5 733 243 0 0 0 chr3R 19482496 19482523 -8422530 + (T)n Simple_repeat Simple_repeat 1 27 0 5 733 226 204 74 0 chr3R 19485208 19485262 -8419791 - DMTOM1_LTR LTR Gypsy -6 404 347 5 733 23 33 0 0 chr3R 19485451 19485481 -8419572 + AT_rich Low_complexity Low_complexity 1 30 0 5 733 21 0 0 0 chr3R 19490012 19490033 -8415020 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 24 32 0 0 chr3R 19490465 19490496 -8414557 + AT_rich Low_complexity Low_complexity 1 31 0 5 733 21 0 0 0 chr3R 19490807 19490828 -8414225 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 23 54 0 0 chr3R 19494799 19494836 -8410217 + AT_rich Low_complexity Low_complexity 1 37 0 5 733 200 125 25 0 chr3R 19501487 19501527 -8403526 + (TAAAA)n Simple_repeat Simple_repeat 1 41 0 5 733 234 0 0 0 chr3R 19501731 19501757 -8403296 + (T)n Simple_repeat Simple_repeat 1 26 0 5 733 189 0 0 0 chr3R 19501817 19501838 -8403215 + (CGATG)n Simple_repeat Simple_repeat 1 21 0 5 733 326 80 20 0 chr3R 19502941 19502991 -8402062 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 733 22 0 0 0 chr3R 19504397 19504419 -8400634 + AT_rich Low_complexity Low_complexity 1 22 0 5 733 21 0 0 0 chr3R 19504485 19504506 -8400547 + AT_rich Low_complexity Low_complexity 1 21 0 5 733 25 0 0 0 chr3R 19505585 19505610 -8399443 + AT_rich Low_complexity Low_complexity 1 25 0 5 733 21 57 0 0 chr3R 19506888 19506923 -8398130 + AT_rich Low_complexity Low_complexity 1 35 0 5 733 22 0 0 0 chr3R 19508449 19508471 -8396582 + AT_rich Low_complexity Low_complexity 1 22 0 5 733 183 80 0 0 chr3R 19509136 19509161 -8395892 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 733 31 44 0 0 chr3R 19509996 19510041 -8395012 + AT_rich Low_complexity Low_complexity 1 45 0 5 733 3959 7 0 0 chr3R 19510473 19510901 -8394152 + ROO_LTR LTR Pao 1 428 0 5 733 23 0 0 0 chr3R 19518552 19518575 -8386478 + AT_rich Low_complexity Low_complexity 1 23 0 5 733 21 104 0 0 chr3R 19523589 19523666 -8381387 + AT_rich Low_complexity Low_complexity 1 77 0 5 734 24 32 0 0 chr3R 19531244 19531275 -8373778 + AT_rich Low_complexity Low_complexity 1 31 0 5 734 35 0 0 0 chr3R 19532215 19532250 -8372803 + AT_rich Low_complexity Low_complexity 1 35 0 5 734 328 303 32 32 chr3R 19532847 19532973 -8372080 - XDMR Unknown Unknown -235 126 1 5 734 904 282 13 9 chr3R 19532860 19533175 -8371878 + SAR_DM Satellite Satellite 602 917 -555 5 734 947 206 112 45 chr3R 19532949 19533280 -8371773 - XDMR_DM Unknown Unknown -7 353 1 5 734 35 24 0 0 chr3R 19534378 19534420 -8370633 + AT_rich Low_complexity Low_complexity 1 42 0 5 734 45 34 0 0 chr3R 19534499 19534558 -8370495 + AT_rich Low_complexity Low_complexity 1 59 0 5 734 25 0 0 0 chr3R 19539940 19539965 -8365088 + AT_rich Low_complexity Low_complexity 1 25 0 5 734 21 36 0 0 chr3R 19542459 19542487 -8362566 + AT_rich Low_complexity Low_complexity 1 28 0 5 734 24 53 0 0 chr3R 19545005 19545043 -8360010 + AT_rich Low_complexity Low_complexity 1 38 0 5 734 27 0 0 0 chr3R 19548019 19548046 -8357007 + AT_rich Low_complexity Low_complexity 1 27 0 5 734 180 77 0 0 chr3R 19548562 19548588 -8356465 + (GA)n Simple_repeat Simple_repeat 2 27 0 5 734 225 178 0 0 chr3R 19548857 19548902 -8356151 + (TATG)n Simple_repeat Simple_repeat 3 47 0 5 734 205 178 44 0 chr3R 19550153 19550198 -8354855 + A-rich Low_complexity Low_complexity 6 52 0 5 734 27 29 0 0 chr3R 19550923 19550957 -8354096 + AT_rich Low_complexity Low_complexity 1 34 0 5 734 215 337 10 10 chr3R 19552052 19552151 -8352902 + (TG)n Simple_repeat Simple_repeat 2 100 0 5 734 23 0 0 0 chr3R 19552622 19552645 -8352408 + AT_rich Low_complexity Low_complexity 1 23 0 5 734 24 0 0 0 chr3R 19553136 19553160 -8351893 + AT_rich Low_complexity Low_complexity 1 24 0 5 734 26 0 0 0 chr3R 19553602 19553628 -8351425 + AT_rich Low_complexity Low_complexity 1 26 0 5 734 204 143 0 0 chr3R 19553983 19554025 -8351028 + (T)n Simple_repeat Simple_repeat 1 42 0 5 734 216 200 0 0 chr3R 19561866 19561911 -8343142 + A-rich Low_complexity Low_complexity 1 45 0 5 734 732 33 0 0 chr3R 19563460 19563551 -8341502 + (TCTA)n Simple_repeat Simple_repeat 3 93 0 5 734 232 261 0 0 chr3R 19565670 19565735 -8339318 + T-rich Low_complexity Low_complexity 1 65 0 5 734 21 0 0 0 chr3R 19566065 19566086 -8338967 + AT_rich Low_complexity Low_complexity 1 21 0 5 734 207 69 0 0 chr3R 19567035 19567064 -8337989 + (ATGGTG)n Simple_repeat Simple_repeat 4 32 0 5 734 22 35 0 0 chr3R 19569158 19569187 -8335866 + AT_rich Low_complexity Low_complexity 1 29 0 5 734 62 0 0 0 chr3R 19576813 19576875 -8328178 + AT_rich Low_complexity Low_complexity 1 62 0 5 734 21 0 0 0 chr3R 19592068 19592089 -8312964 + AT_rich Low_complexity Low_complexity 1 21 0 5 734 34 0 0 0 chr3R 19598641 19598675 -8306378 + AT_rich Low_complexity Low_complexity 1 34 0 5 734 22 35 0 0 chr3R 19602988 19603017 -8302036 + AT_rich Low_complexity Low_complexity 1 29 0 5 734 214 259 0 0 chr3R 19607996 19608050 -8297003 + (CAA)n Simple_repeat Simple_repeat 1 54 0 5 734 21 0 0 0 chr3R 19611537 19611558 -8293495 + AT_rich Low_complexity Low_complexity 1 21 0 5 734 224 330 0 0 chr3R 19614538 19614629 -8290424 + (CCA)n Simple_repeat Simple_repeat 2 92 0 5 734 237 65 0 0 chr3R 19629098 19629129 -8275924 + (CTTCG)n Simple_repeat Simple_repeat 4 34 0 5 734 26 0 0 0 chr3R 19634673 19634699 -8270354 + AT_rich Low_complexity Low_complexity 1 26 0 5 734 47 33 0 0 chr3R 19635034 19635095 -8269958 + AT_rich Low_complexity Low_complexity 1 61 0 5 734 192 97 0 0 chr3R 19635526 19635557 -8269496 + (T)n Simple_repeat Simple_repeat 1 31 0 5 734 371 282 6 23 chr3R 19642442 19642616 -8262437 + (CTG)n Simple_repeat Simple_repeat 1 171 0 5 734 21 36 0 0 chr3R 19646072 19646100 -8258953 + AT_rich Low_complexity Low_complexity 1 28 0 5 734 184 131 21 21 chr3R 19649547 19649594 -8255459 + A-rich Low_complexity Low_complexity 1 47 0 5 734 246 105 0 0 chr3R 19651341 19651379 -8253674 + (TTG)n Simple_repeat Simple_repeat 1 38 0 5 734 242 235 15 0 chr3R 19652850 19652918 -8252135 + (CA)n Simple_repeat Simple_repeat 1 69 0 5 734 25 0 0 0 chr3R 19656532 19656557 -8248496 + AT_rich Low_complexity Low_complexity 1 25 0 5 734 192 40 0 0 chr3R 19657440 19657465 -8247588 + (TTGG)n Simple_repeat Simple_repeat 4 28 0 5 734 297 75 0 0 chr3R 19658001 19658041 -8247012 + (TATG)n Simple_repeat Simple_repeat 4 43 0 5 734 25 31 0 0 chr3R 19659340 19659372 -8245681 + AT_rich Low_complexity Low_complexity 1 32 0 5 734 198 128 0 0 chr3R 19659776 19659815 -8245238 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 5 735 4017 0 0 0 chr3R 19661180 19661608 -8243445 + ROO_LTR LTR Pao 1 428 0 5 735 58050 1 2 0 chr3R 19661608 19669845 -8235208 + ROO_I LTR Pao 1 8256 0 5 735 4022 0 0 0 chr3R 19669845 19670273 -8234780 + ROO_LTR LTR Pao 1 428 0 5 735 225 0 0 0 chr3R 19671292 19671317 -8233736 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 735 23 0 0 0 chr3R 19671428 19671451 -8233602 + AT_rich Low_complexity Low_complexity 1 23 0 5 735 306 0 0 0 chr3R 19676138 19676172 -8228881 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 735 4711 4 2 0 chr3R 19676834 19677351 -8227702 - NOMAD_LTR LTR Gypsy 0 518 1 5 735 61405 1 0 1 chr3R 19677351 19683927 -8221126 - NOMAD_I LTR Gypsy 0 6572 1 5 735 4711 4 2 0 chr3R 19683927 19684444 -8220609 - NOMAD_LTR LTR Gypsy 0 518 1 5 735 207 186 27 54 chr3R 19685900 19685974 -8219079 + T-rich Low_complexity Low_complexity 4 75 0 5 735 22 0 0 0 chr3R 19687693 19687715 -8217338 + AT_rich Low_complexity Low_complexity 1 22 0 5 735 24 0 0 0 chr3R 19691455 19691479 -8213574 + AT_rich Low_complexity Low_complexity 1 24 0 5 735 186 118 0 0 chr3R 19697171 19697205 -8207848 + (CAT)n Simple_repeat Simple_repeat 1 34 0 5 735 22 0 0 0 chr3R 19698184 19698206 -8206847 + AT_rich Low_complexity Low_complexity 1 22 0 5 735 219 188 0 0 chr3R 19698987 19699035 -8206018 + (CGAAT)n Simple_repeat Simple_repeat 4 51 0 5 735 274 224 0 0 chr3R 19699684 19699782 -8205271 + ROO_I LTR Pao 646 743 -7513 5 735 213 39 0 0 chr3R 19702214 19702240 -8202813 + (CATA)n Simple_repeat Simple_repeat 3 28 0 5 735 183 80 0 0 chr3R 19703649 19703674 -8201379 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 735 204 40 0 0 chr3R 19704599 19704624 -8200429 + (TAAAG)n Simple_repeat Simple_repeat 1 25 0 5 735 192 40 0 0 chr3R 19707046 19707071 -8197982 + (CAT)n Simple_repeat Simple_repeat 2 26 0 5 735 23 0 0 0 chr3R 19709386 19709409 -8195644 + AT_rich Low_complexity Low_complexity 1 23 0 5 735 234 0 0 0 chr3R 19709724 19709750 -8195303 + (CAAGC)n Simple_repeat Simple_repeat 2 27 0 5 735 22 35 0 0 chr3R 19710466 19710495 -8194558 + AT_rich Low_complexity Low_complexity 1 29 0 5 735 25 0 0 0 chr3R 19712192 19712217 -8192836 + AT_rich Low_complexity Low_complexity 1 25 0 5 735 245 219 27 0 chr3R 19712373 19712446 -8192607 + (CAA)n Simple_repeat Simple_repeat 3 77 0 5 735 28 0 0 0 chr3R 19712882 19712910 -8192143 + AT_rich Low_complexity Low_complexity 1 28 0 5 735 194 128 0 25 chr3R 19713240 19713280 -8191773 + (TTG)n Simple_repeat Simple_repeat 1 39 0 5 735 924 73 0 8 chr3R 19716928 19717053 -8188000 + DNAREP1_DM LINE Penelope 1 124 -470 5 735 264 163 0 0 chr3R 19717115 19717158 -8187895 + DNAREP1_DM LINE Penelope 123 165 -429 5 735 797 85 93 0 chr3R 19717171 19717289 -8187764 + DNAREP1_DM LINE Penelope 435 563 -31 5 735 30 27 0 0 chr3R 19719983 19720020 -8185033 + AT_rich Low_complexity Low_complexity 1 37 0 5 735 300 91 0 0 chr3R 19721018 19721062 -8183991 + (CTG)n Simple_repeat Simple_repeat 1 44 0 5 735 21 0 0 0 chr3R 19721743 19721764 -8183289 + AT_rich Low_complexity Low_complexity 1 21 0 5 735 257 203 0 0 chr3R 19725021 19725080 -8179973 - ROO_I LTR Pao -7523 733 675 5 735 342 147 0 0 chr3R 19729028 19729096 -8175957 - ROO_I LTR Pao -7524 732 665 5 735 180 125 0 0 chr3R 19729444 19729476 -8175577 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 735 222 37 0 0 chr3R 19731105 19731132 -8173921 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 735 278 106 21 0 chr3R 19732139 19732186 -8172867 + (CACTC)n Simple_repeat Simple_repeat 1 48 0 5 735 216 0 0 0 chr3R 19732295 19732319 -8172734 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 735 180 77 0 0 chr3R 19732738 19732764 -8172289 + (GGA)n Simple_repeat Simple_repeat 1 26 0 5 735 233 200 40 0 chr3R 19733097 19733147 -8171906 + (CATTC)n Simple_repeat Simple_repeat 5 56 0 5 735 191 96 0 71 chr3R 19734346 19734402 -8170651 + (CATCC)n Simple_repeat Simple_repeat 4 55 0 5 735 214 208 40 40 chr3R 19734840 19734915 -8170138 + (CATA)n Simple_repeat Simple_repeat 4 78 0 5 735 213 208 19 19 chr3R 19735503 19735557 -8169496 + T-rich Low_complexity Low_complexity 2 55 0 5 735 216 0 0 0 chr3R 19738213 19738237 -8166816 + (CGGT)n Simple_repeat Simple_repeat 4 27 0 5 735 246 220 0 0 chr3R 19738456 19738515 -8166538 + (CAA)n Simple_repeat Simple_repeat 1 59 0 5 735 241 245 0 0 chr3R 19738798 19738847 -8166206 + (TCG)n Simple_repeat Simple_repeat 1 49 0 5 735 255 103 0 0 chr3R 19741330 19741369 -8163684 + (CATCT)n Simple_repeat Simple_repeat 1 39 0 5 735 210 37 0 0 chr3R 19741408 19741435 -8163618 + (CAT)n Simple_repeat Simple_repeat 3 29 0 5 735 23 0 0 0 chr3R 19742204 19742227 -8162826 + AT_rich Low_complexity Low_complexity 1 23 0 5 735 209 186 0 0 chr3R 19744432 19744475 -8160578 + (CTG)n Simple_repeat Simple_repeat 1 43 0 5 735 273 119 0 0 chr3R 19746025 19746067 -8158986 + (CTG)n Simple_repeat Simple_repeat 3 44 0 5 735 210 225 24 36 chr3R 19746106 19746189 -8158864 + (CTG)n Simple_repeat Simple_repeat 2 83 0 5 735 354 134 0 0 chr3R 19746210 19746277 -8158776 + (CTG)n Simple_repeat Simple_repeat 3 69 0 5 735 227 185 8 150 chr3R 19746386 19746513 -8158540 - ROO_I LTR Pao -7515 741 633 5 735 28 0 0 0 chr3R 19747523 19747551 -8157502 + AT_rich Low_complexity Low_complexity 1 28 0 5 735 180 0 0 0 chr3R 19748211 19748231 -8156822 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 735 25 0 0 0 chr3R 19748528 19748553 -8156500 + AT_rich Low_complexity Low_complexity 1 25 0 5 735 22 35 0 0 chr3R 19748907 19748936 -8156117 + AT_rich Low_complexity Low_complexity 1 29 0 5 735 21 0 0 0 chr3R 19752133 19752154 -8152899 + AT_rich Low_complexity Low_complexity 1 21 0 5 735 24 53 0 0 chr3R 19753465 19753503 -8151550 + AT_rich Low_complexity Low_complexity 1 38 0 5 735 24 53 0 0 chr3R 19758465 19758503 -8146550 + AT_rich Low_complexity Low_complexity 1 38 0 5 735 192 40 0 0 chr3R 19763053 19763078 -8141975 + (TAGA)n Simple_repeat Simple_repeat 2 26 0 5 735 24 0 0 0 chr3R 19763361 19763385 -8141668 + AT_rich Low_complexity Low_complexity 1 24 0 5 735 180 0 0 0 chr3R 19767869 19767889 -8137164 + (A)n Simple_repeat Simple_repeat 1 20 0 5 735 198 0 0 0 chr3R 19774271 19774293 -8130760 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 735 26 30 0 0 chr3R 19776653 19776686 -8128367 + AT_rich Low_complexity Low_complexity 1 33 0 5 735 21 57 0 0 chr3R 19784189 19784224 -8120829 + AT_rich Low_complexity Low_complexity 1 35 0 5 735 189 178 0 0 chr3R 19787240 19787285 -8117768 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 735 191 88 0 29 chr3R 19789182 19789217 -8115836 + (CAG)n Simple_repeat Simple_repeat 2 35 0 5 735 264 231 0 15 chr3R 19789461 19789527 -8115526 + (CATATA)n Simple_repeat Simple_repeat 1 65 0 5 735 235 316 0 0 chr3R 19790893 19790969 -8114084 + CT-rich Low_complexity Low_complexity 2 77 0 5 735 183 139 0 0 chr3R 19791117 19791153 -8113900 + (TC)n Simple_repeat Simple_repeat 1 36 0 5 91 267 169 0 0 chr3R 19791838 19791909 -8113144 + (CAG)n Simple_repeat Simple_repeat 2 72 0 5 736 24 85 0 0 chr3R 19795312 19795371 -8109682 + AT_rich Low_complexity Low_complexity 1 59 0 5 736 22 35 0 0 chr3R 19795915 19795944 -8109109 + AT_rich Low_complexity Low_complexity 1 29 0 5 736 221 212 15 15 chr3R 19799732 19799799 -8105254 + T-rich Low_complexity Low_complexity 6 72 0 5 736 22 0 0 0 chr3R 19803603 19803625 -8101428 + AT_rich Low_complexity Low_complexity 1 22 0 5 736 33 25 0 0 chr3R 19806082 19806122 -8098931 + AT_rich Low_complexity Low_complexity 1 40 0 5 736 285 128 0 0 chr3R 19806389 19806436 -8098617 + (CAG)n Simple_repeat Simple_repeat 3 49 0 5 736 225 193 0 50 chr3R 19806893 19806953 -8098100 + (CACAC)n Simple_repeat Simple_repeat 3 59 0 5 736 210 224 0 0 chr3R 19807741 19807790 -8097263 + (CAG)n Simple_repeat Simple_repeat 1 49 0 5 736 205 191 0 0 chr3R 19808942 19808984 -8096069 + A-rich Low_complexity Low_complexity 1 42 0 5 736 289 161 11 65 chr3R 19810137 19810230 -8094823 + A-rich Low_complexity Low_complexity 2 89 0 5 736 25 31 0 0 chr3R 19810966 19810998 -8094055 + AT_rich Low_complexity Low_complexity 1 32 0 5 736 25 0 0 0 chr3R 19823873 19823898 -8081155 + AT_rich Low_complexity Low_complexity 1 25 0 5 736 200 216 0 19 chr3R 19827568 19827620 -8077433 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 736 22 0 0 0 chr3R 19828890 19828912 -8076141 + AT_rich Low_complexity Low_complexity 1 22 0 5 736 218 154 19 37 chr3R 19828960 19829014 -8076039 + (CAACG)n Simple_repeat Simple_repeat 5 57 0 5 736 22 0 0 0 chr3R 19829504 19829526 -8075527 + AT_rich Low_complexity Low_complexity 1 22 0 5 736 240 100 0 0 chr3R 19831304 19831344 -8073709 + (T)n Simple_repeat Simple_repeat 1 40 0 5 736 23 92 0 0 chr3R 19831981 19832046 -8073007 + AT_rich Low_complexity Low_complexity 1 65 0 5 736 180 0 0 0 chr3R 19832097 19832117 -8072936 + (T)n Simple_repeat Simple_repeat 1 20 0 5 736 201 74 0 0 chr3R 19835416 19835443 -8069610 + (CAG)n Simple_repeat Simple_repeat 2 28 0 5 736 222 62 0 0 chr3R 19835631 19835663 -8069390 + (CATTC)n Simple_repeat Simple_repeat 5 36 0 5 736 208 137 0 89 chr3R 19836513 19836569 -8068484 + (TGGG)n Simple_repeat Simple_repeat 3 53 0 5 736 214 233 0 0 chr3R 19837885 19837928 -8067125 + C-rich Low_complexity Low_complexity 2 44 0 5 736 186 43 0 0 chr3R 19839924 19839947 -8065106 + (T)n Simple_repeat Simple_repeat 1 23 0 5 736 216 122 0 0 chr3R 19844303 19844344 -8060709 + (ACTG)n Simple_repeat Simple_repeat 3 43 0 5 736 24 32 0 0 chr3R 19849322 19849353 -8055700 + AT_rich Low_complexity Low_complexity 1 31 0 5 736 284 333 0 8 chr3R 19850386 19850519 -8054534 + (TTG)n Simple_repeat Simple_repeat 1 132 0 5 736 213 65 0 0 chr3R 19851784 19851815 -8053238 + (CAG)n Simple_repeat Simple_repeat 2 32 0 5 736 237 83 0 0 chr3R 19856099 19856135 -8048918 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 5 736 192 40 0 0 chr3R 19856826 19856851 -8048202 + (TTTC)n Simple_repeat Simple_repeat 3 27 0 5 736 200 128 26 0 chr3R 19857115 19857154 -8047899 + CT-rich Low_complexity Low_complexity 2 41 0 5 736 24 53 0 0 chr3R 19865275 19865313 -8039740 + AT_rich Low_complexity Low_complexity 1 38 0 5 736 236 315 0 0 chr3R 19870228 19870301 -8034752 + (CGG)n Simple_repeat Simple_repeat 1 73 0 5 736 204 229 0 0 chr3R 19873043 19873091 -8031962 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 736 25 31 0 0 chr3R 19880812 19880844 -8024209 + AT_rich Low_complexity Low_complexity 1 32 0 5 736 21 0 0 0 chr3R 19888117 19888138 -8016915 + AT_rich Low_complexity Low_complexity 1 21 0 5 736 22 0 0 0 chr3R 19889062 19889084 -8015969 + AT_rich Low_complexity Low_complexity 1 22 0 5 736 214 250 47 23 chr3R 19890313 19890399 -8014654 + T-rich Low_complexity Low_complexity 3 90 0 5 736 227 219 14 14 chr3R 19890587 19890661 -8014392 + T-rich Low_complexity Low_complexity 3 76 0 5 736 21 36 0 0 chr3R 19891024 19891052 -8014001 + AT_rich Low_complexity Low_complexity 1 28 0 5 736 204 256 26 0 chr3R 19891103 19891181 -8013872 + (TA)n Simple_repeat Simple_repeat 1 80 0 5 736 180 135 0 0 chr3R 19891312 19891349 -8013704 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 736 26 30 0 0 chr3R 19891843 19891876 -8013177 + AT_rich Low_complexity Low_complexity 1 33 0 5 736 24 53 0 0 chr3R 19891968 19892006 -8013047 + AT_rich Low_complexity Low_complexity 1 38 0 5 736 24 53 0 0 chr3R 19892810 19892848 -8012205 + AT_rich Low_complexity Low_complexity 1 38 0 5 736 34 0 0 0 chr3R 19892973 19893007 -8012046 + AT_rich Low_complexity Low_complexity 1 34 0 5 736 28 48 0 0 chr3R 19894518 19894560 -8010493 + AT_rich Low_complexity Low_complexity 1 42 0 5 736 28 0 0 0 chr3R 19895374 19895402 -8009651 + AT_rich Low_complexity Low_complexity 1 28 0 5 736 225 0 0 0 chr3R 19895768 19895793 -8009260 + (GGTTG)n Simple_repeat Simple_repeat 2 26 0 5 736 255 31 0 0 chr3R 19897589 19897621 -8007432 + (CAT)n Simple_repeat Simple_repeat 3 34 0 5 736 3048 6 0 22 chr3R 19897882 19898242 -8006811 - LINEJ1_DM LINE Jockey 0 5020 4669 5 736 225 0 0 0 chr3R 19898827 19898852 -8006201 + (CACTC)n Simple_repeat Simple_repeat 1 25 0 5 736 222 37 0 0 chr3R 19900513 19900540 -8004513 + (CGATA)n Simple_repeat Simple_repeat 5 31 0 5 736 306 0 0 0 chr3R 19900712 19900746 -8004307 + (CAA)n Simple_repeat Simple_repeat 2 35 0 5 736 4649 2 2 10 chr3R 19902692 19903202 -8001851 - HOBO DNA hAT 0 3016 2511 5 736 8492 1 0 0 chr3R 19903194 19904098 -8000955 - HOBO DNA hAT -2112 904 1 5 736 405 95 0 0 chr3R 19905473 19905536 -7999517 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 736 342 0 0 0 chr3R 19905885 19905923 -7999130 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 736 224 191 0 41 chr3R 19907269 19907318 -7997735 + (CATA)n Simple_repeat Simple_repeat 1 47 0 5 736 233 241 0 18 chr3R 19908460 19908515 -7996538 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 736 234 0 0 0 chr3R 19911463 19911489 -7993564 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 736 207 114 0 0 chr3R 19913930 19913965 -7991088 + (TTG)n Simple_repeat Simple_repeat 3 37 0 5 736 22 0 0 0 chr3R 19915622 19915644 -7989409 + AT_rich Low_complexity Low_complexity 1 22 0 5 736 27 0 0 0 chr3R 19921443 19921470 -7983583 + AT_rich Low_complexity Low_complexity 1 27 0 5 737 212 59 0 29 chr3R 19923105 19923140 -7981913 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 5 737 210 234 38 25 chr3R 19924619 19924698 -7980355 + (TAAA)n Simple_repeat Simple_repeat 2 81 0 5 737 213 159 23 0 chr3R 19927303 19927347 -7977706 + T-rich Low_complexity Low_complexity 6 50 0 5 737 201 156 0 0 chr3R 19930917 19930949 -7974104 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 737 206 229 16 0 chr3R 19931047 19931108 -7973945 + CT-rich Low_complexity Low_complexity 1 62 0 5 737 21 57 0 0 chr3R 19931702 19931737 -7973316 + AT_rich Low_complexity Low_complexity 1 35 0 5 737 25 0 0 0 chr3R 19932175 19932200 -7972853 + AT_rich Low_complexity Low_complexity 1 25 0 5 737 233 57 29 0 chr3R 19934406 19934441 -7970612 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 737 27 100 0 0 chr3R 19934907 19934997 -7970056 + AT_rich Low_complexity Low_complexity 1 90 0 5 737 33 56 0 0 chr3R 19938569 19938623 -7966430 + AT_rich Low_complexity Low_complexity 1 54 0 5 737 21 0 0 0 chr3R 19939592 19939613 -7965440 + AT_rich Low_complexity Low_complexity 1 21 0 5 737 25 0 0 0 chr3R 19939760 19939785 -7965268 + AT_rich Low_complexity Low_complexity 1 25 0 5 737 239 79 26 0 chr3R 19939817 19939855 -7965198 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 737 500 77 0 13 chr3R 19939953 19940032 -7965021 + (TA)n Simple_repeat Simple_repeat 2 79 0 5 737 221 175 0 0 chr3R 19943213 19943253 -7961800 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 737 24 67 0 0 chr3R 19944652 19944697 -7960356 + AT_rich Low_complexity Low_complexity 1 45 0 5 737 198 0 0 0 chr3R 19946240 19946262 -7958791 + (GGA)n Simple_repeat Simple_repeat 1 22 0 5 737 231 250 0 0 chr3R 19960002 19960066 -7944987 + (CAG)n Simple_repeat Simple_repeat 3 66 0 5 737 273 204 0 0 chr3R 19964307 19964361 -7940692 + DNAREP1_DM LINE Penelope 5 58 -536 5 737 284 116 0 0 chr3R 19964476 19964519 -7940534 + DNAREP1_DM LINE Penelope 551 593 -1 5 737 34 0 0 0 chr3R 19966481 19966515 -7938538 + AT_rich Low_complexity Low_complexity 1 34 0 5 737 24 32 0 0 chr3R 19966980 19967011 -7938042 + AT_rich Low_complexity Low_complexity 1 31 0 5 737 27 73 0 0 chr3R 19974753 19974808 -7930245 + AT_rich Low_complexity Low_complexity 1 55 0 5 737 31 58 0 0 chr3R 19977762 19977814 -7927239 + AT_rich Low_complexity Low_complexity 1 52 0 5 737 35 71 0 0 chr3R 19977882 19977952 -7927101 + AT_rich Low_complexity Low_complexity 1 70 0 5 737 24 32 0 0 chr3R 19980882 19980913 -7924140 + AT_rich Low_complexity Low_complexity 1 31 0 5 737 25 31 0 0 chr3R 19982522 19982554 -7922499 + AT_rich Low_complexity Low_complexity 1 32 0 5 737 34 55 0 0 chr3R 19987270 19987325 -7917728 + AT_rich Low_complexity Low_complexity 1 55 0 5 737 22 0 0 0 chr3R 19989551 19989573 -7915480 + AT_rich Low_complexity Low_complexity 1 22 0 5 737 231 103 0 0 chr3R 19998573 19998612 -7906441 + (A)n Simple_repeat Simple_repeat 1 39 0 5 737 210 160 0 0 chr3R 20004906 20004956 -7900097 + CT-rich Low_complexity Low_complexity 1 50 0 5 737 207 0 0 0 chr3R 20010593 20010616 -7894437 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 5 737 295 250 95 0 chr3R 20010851 20010935 -7894118 - DNAREP1_DM LINE Penelope -115 479 388 5 737 382 272 0 0 chr3R 20010969 20011083 -7893970 - DNAREP1_DM LINE Penelope -480 114 1 5 737 203 357 0 0 chr3R 20023981 20024051 -7881002 + C-rich Low_complexity Low_complexity 6 75 0 5 737 34 24 0 0 chr3R 20026845 20026886 -7878167 + AT_rich Low_complexity Low_complexity 1 41 0 5 737 207 125 0 0 chr3R 20026939 20026979 -7878074 + (T)n Simple_repeat Simple_repeat 1 40 0 5 737 186 103 0 0 chr3R 20027302 20027331 -7877722 + (CAT)n Simple_repeat Simple_repeat 3 31 0 5 737 23 33 0 0 chr3R 20029376 20029406 -7875647 + AT_rich Low_complexity Low_complexity 1 30 0 5 737 208 147 0 0 chr3R 20030905 20030939 -7874114 + (T)n Simple_repeat Simple_repeat 1 34 0 5 737 249 226 0 31 chr3R 20031894 20031958 -7873095 + (CCTAT)n Simple_repeat Simple_repeat 3 64 0 5 737 22 0 0 0 chr3R 20032154 20032176 -7872877 + AT_rich Low_complexity Low_complexity 1 22 0 5 737 2221 11 26 11 chr3R 20032990 20033261 -7871792 + BLASTOPIA_LTR LTR Gypsy 1 275 0 5 737 41571 1 1 0 chr3R 20033261 20037738 -7867315 + BLASTOPIA_I LTR Gypsy 1 4481 0 5 737 2221 11 26 11 chr3R 20037738 20038009 -7867044 + BLASTOPIA_LTR LTR Gypsy 1 275 0 5 737 21 0 0 0 chr3R 20038342 20038363 -7866690 + AT_rich Low_complexity Low_complexity 1 21 0 5 737 252 86 0 0 chr3R 20038917 20038952 -7866101 + (ATG)n Simple_repeat Simple_repeat 3 37 0 5 737 246 81 0 0 chr3R 20039502 20039539 -7865514 + (CAA)n Simple_repeat Simple_repeat 1 37 0 5 737 22 35 0 0 chr3R 20040272 20040301 -7864752 + AT_rich Low_complexity Low_complexity 1 29 0 5 737 22 0 0 0 chr3R 20040576 20040598 -7864455 + AT_rich Low_complexity Low_complexity 1 22 0 5 737 192 125 0 0 chr3R 20040751 20040783 -7864270 + (CAAGC)n Simple_repeat Simple_repeat 3 34 0 5 737 239 93 23 0 chr3R 20042116 20042159 -7862894 + (ATG)n Simple_repeat Simple_repeat 3 46 0 5 737 189 171 0 0 chr3R 20042608 20042643 -7862410 + (TGG)n Simple_repeat Simple_repeat 1 35 0 5 737 258 81 0 0 chr3R 20044556 20044593 -7860460 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 737 21 0 0 0 chr3R 20046492 20046513 -7858540 + AT_rich Low_complexity Low_complexity 1 21 0 5 737 215 125 41 20 chr3R 20047413 20047462 -7857591 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 737 22 70 0 0 chr3R 20049213 20049256 -7855797 + AT_rich Low_complexity Low_complexity 1 43 0 5 737 283 279 0 26 chr3R 20049546 20049660 -7855393 + (TCG)n Simple_repeat Simple_repeat 1 111 0 5 737 286 139 27 82 chr3R 20051131 20051241 -7853812 - ROO_I LTR Pao -7522 734 631 5 738 35 41 0 0 chr3R 20054030 20054079 -7850974 + AT_rich Low_complexity Low_complexity 1 49 0 5 738 228 111 0 0 chr3R 20057086 20057122 -7847931 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 738 21 36 0 0 chr3R 20060321 20060349 -7844704 + AT_rich Low_complexity Low_complexity 1 28 0 5 738 229 312 0 0 chr3R 20061577 20061673 -7843380 + GA-rich Low_complexity Low_complexity 2 97 0 5 738 201 231 0 0 chr3R 20061759 20061811 -7843242 + (CGA)n Simple_repeat Simple_repeat 2 53 0 5 738 576 130 0 0 chr3R 20064534 20064626 -7840427 + (CAG)n Simple_repeat Simple_repeat 3 94 0 5 738 315 130 0 0 chr3R 20065367 20065421 -7839632 + (CAG)n Simple_repeat Simple_repeat 2 55 0 5 738 229 273 0 35 chr3R 20065537 20065651 -7839402 + (CAG)n Simple_repeat Simple_repeat 3 112 0 5 738 263 374 0 0 chr3R 20066227 20066419 -7838634 + (CGA)n Simple_repeat Simple_repeat 1 192 0 5 738 25 0 0 0 chr3R 20068342 20068367 -7836686 + AT_rich Low_complexity Low_complexity 1 25 0 5 738 207 139 0 0 chr3R 20069713 20069749 -7835304 + (GAA)n Simple_repeat Simple_repeat 2 37 0 5 738 211 128 0 25 chr3R 20071675 20071715 -7833338 + (CAG)n Simple_repeat Simple_repeat 3 41 0 5 738 366 308 0 19 chr3R 20071777 20071936 -7833117 + (CAG)n Simple_repeat Simple_repeat 1 156 0 5 738 332 282 8 8 chr3R 20073219 20073351 -7831702 + (CAG)n Simple_repeat Simple_repeat 3 134 0 5 738 25 51 0 0 chr3R 20074202 20074241 -7830812 + AT_rich Low_complexity Low_complexity 1 39 0 5 738 187 212 24 0 chr3R 20074315 20074400 -7830653 + (CA)n Simple_repeat Simple_repeat 2 88 0 5 738 21 36 0 0 chr3R 20074522 20074550 -7830503 + AT_rich Low_complexity Low_complexity 1 28 0 5 738 31 0 0 0 chr3R 20075899 20075930 -7829123 + AT_rich Low_complexity Low_complexity 1 31 0 5 738 183 100 0 0 chr3R 20076032 20076062 -7828991 + (TTA)n Simple_repeat Simple_repeat 2 31 0 5 738 32 43 0 0 chr3R 20078600 20078646 -7826407 + AT_rich Low_complexity Low_complexity 1 46 0 5 738 35 24 0 0 chr3R 20080503 20080545 -7824508 + AT_rich Low_complexity Low_complexity 1 42 0 5 738 219 88 0 0 chr3R 20085210 20085244 -7819809 + (GTGTG)n Simple_repeat Simple_repeat 5 38 0 5 738 204 97 0 0 chr3R 20086360 20086391 -7818662 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 738 183 80 0 0 chr3R 20089361 20089386 -7815667 + (ATG)n Simple_repeat Simple_repeat 1 25 0 5 738 189 107 0 0 chr3R 20090572 20090600 -7814453 + (CGAAA)n Simple_repeat Simple_repeat 3 30 0 5 738 21 0 0 0 chr3R 20090744 20090765 -7814288 + AT_rich Low_complexity Low_complexity 1 21 0 5 738 479 92 0 0 chr3R 20105112 20105177 -7799876 + DNAREP1_DM LINE Penelope 1 65 -529 5 738 238 0 0 0 chr3R 20105175 20105202 -7799851 - DNAREP1_DM LINE Penelope -566 28 2 5 738 234 0 0 0 chr3R 20109535 20109561 -7795492 + (TCC)n Simple_repeat Simple_repeat 1 26 0 5 738 200 128 0 25 chr3R 20110339 20110379 -7794674 + (CAT)n Simple_repeat Simple_repeat 3 41 0 5 738 28 29 0 0 chr3R 20110668 20110703 -7794350 + AT_rich Low_complexity Low_complexity 1 35 0 5 738 228 256 35 0 chr3R 20117166 20117252 -7787801 + (TTG)n Simple_repeat Simple_repeat 3 91 0 5 738 225 270 30 0 chr3R 20121377 20121477 -7783576 + ROO_I LTR Pao 652 754 -7502 5 738 25 0 0 0 chr3R 20124574 20124599 -7780454 + AT_rich Low_complexity Low_complexity 1 25 0 5 738 26 0 0 0 chr3R 20125696 20125722 -7779331 + AT_rich Low_complexity Low_complexity 1 26 0 5 738 23 0 0 0 chr3R 20126234 20126257 -7778796 + AT_rich Low_complexity Low_complexity 1 23 0 5 738 186 71 0 0 chr3R 20126338 20126366 -7778687 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 738 189 0 0 0 chr3R 20130613 20130634 -7774419 + (ACTTG)n Simple_repeat Simple_repeat 1 21 0 5 738 204 230 16 66 chr3R 20133096 20133217 -7771836 + (CAA)n Simple_repeat Simple_repeat 1 115 0 5 738 22 70 0 0 chr3R 20133837 20133880 -7771173 + AT_rich Low_complexity Low_complexity 1 43 0 5 738 23 0 0 0 chr3R 20140275 20140298 -7764755 + AT_rich Low_complexity Low_complexity 1 23 0 5 738 203 261 0 0 chr3R 20145677 20145723 -7759330 + (CATA)n Simple_repeat Simple_repeat 1 46 0 5 738 24 32 0 0 chr3R 20150136 20150167 -7754886 + AT_rich Low_complexity Low_complexity 1 31 0 5 738 264 137 0 0 chr3R 20151704 20151755 -7753298 + (ATG)n Simple_repeat Simple_repeat 3 53 0 5 738 241 224 0 0 chr3R 20152569 20152618 -7752435 + GA-rich Low_complexity Low_complexity 2 50 0 5 738 256 169 51 0 chr3R 20152782 20152841 -7752212 + G_DM LINE Jockey 555 616 -3730 5 738 23 33 0 0 chr3R 20166433 20166463 -7738590 + AT_rich Low_complexity Low_complexity 1 30 0 5 738 21 36 0 0 chr3R 20169604 20169632 -7735421 + AT_rich Low_complexity Low_complexity 1 28 0 5 738 27 0 0 0 chr3R 20169930 20169957 -7735096 + AT_rich Low_complexity Low_complexity 1 27 0 5 738 21 0 0 0 chr3R 20170214 20170235 -7734818 + AT_rich Low_complexity Low_complexity 1 21 0 5 738 33 25 0 0 chr3R 20170288 20170328 -7734725 + AT_rich Low_complexity Low_complexity 1 40 0 5 738 23 33 0 0 chr3R 20171445 20171475 -7733578 + AT_rich Low_complexity Low_complexity 1 30 0 5 738 30 27 0 0 chr3R 20178674 20178711 -7726342 + AT_rich Low_complexity Low_complexity 1 37 0 5 739 314 327 46 18 chr3R 20186061 20186196 -7718857 + SAR_DM Satellite Satellite 541 858 -614 5 739 388 261 16 32 chr3R 20186196 20186382 -7718671 - XDMR_DM Unknown Unknown -1 359 177 5 739 41 0 0 0 chr3R 20194938 20194979 -7710074 + AT_rich Low_complexity Low_complexity 1 41 0 5 739 216 0 0 0 chr3R 20197610 20197634 -7707419 + (GGA)n Simple_repeat Simple_repeat 2 25 0 5 739 35 41 0 0 chr3R 20199745 20199794 -7705259 + AT_rich Low_complexity Low_complexity 1 49 0 5 739 221 214 0 35 chr3R 20203547 20203605 -7701448 + (CATTA)n Simple_repeat Simple_repeat 5 60 0 5 739 25 0 0 0 chr3R 20207059 20207084 -7697969 + AT_rich Low_complexity Low_complexity 1 25 0 5 739 22 0 0 0 chr3R 20210007 20210029 -7695024 + AT_rich Low_complexity Low_complexity 1 22 0 5 739 198 71 0 0 chr3R 20214387 20214415 -7690638 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 739 270 152 0 0 chr3R 20216732 20216791 -7688262 + (CCA)n Simple_repeat Simple_repeat 2 60 0 5 739 23 0 0 0 chr3R 20217751 20217774 -7687279 + AT_rich Low_complexity Low_complexity 1 23 0 5 739 26 50 0 0 chr3R 20220041 20220081 -7684972 + AT_rich Low_complexity Low_complexity 1 40 0 5 739 252 161 0 0 chr3R 20221739 20221801 -7683252 + (TG)n Simple_repeat Simple_repeat 2 63 0 5 739 273 118 0 0 chr3R 20222525 20222576 -7682477 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 739 216 97 0 0 chr3R 20223171 20223202 -7681851 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 5 739 208 280 12 47 chr3R 20226212 20226298 -7678755 + (TATATG)n Simple_repeat Simple_repeat 6 88 0 5 739 234 290 0 0 chr3R 20227260 20227329 -7677724 - ROO_I LTR Pao -7532 724 656 5 739 198 0 0 0 chr3R 20233777 20233799 -7671254 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 739 186 43 0 0 chr3R 20235197 20235220 -7669833 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 739 21 0 0 0 chr3R 20236349 20236370 -7668683 + AT_rich Low_complexity Low_complexity 1 21 0 5 739 189 74 0 0 chr3R 20238944 20238971 -7666082 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 739 241 165 94 85 chr3R 20241163 20241269 -7663784 - ARS406_DM Unknown Unknown -187 166 60 5 739 1872 280 36 38 chr3R 20241277 20243294 -7661759 + SAR_DM Satellite Satellite 1 2013 -245 5 739 213 200 0 0 chr3R 20244502 20244542 -7660511 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 739 213 108 0 0 chr3R 20247936 20247973 -7657080 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 739 23 0 0 0 chr3R 20248976 20248999 -7656054 + AT_rich Low_complexity Low_complexity 1 23 0 5 739 24 0 0 0 chr3R 20249165 20249189 -7655864 + AT_rich Low_complexity Low_complexity 1 24 0 5 739 243 0 0 0 chr3R 20250794 20250821 -7654232 + (T)n Simple_repeat Simple_repeat 1 27 0 5 739 24 0 0 0 chr3R 20253790 20253814 -7651239 + AT_rich Low_complexity Low_complexity 1 24 0 5 739 217 239 0 0 chr3R 20255537 20255583 -7649470 + (ATGGTG)n Simple_repeat Simple_repeat 3 48 0 5 739 243 0 0 0 chr3R 20256408 20256435 -7648618 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 5 739 27 0 0 0 chr3R 20257473 20257500 -7647553 + AT_rich Low_complexity Low_complexity 1 27 0 5 739 198 0 0 0 chr3R 20259655 20259677 -7645376 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 739 279 0 0 0 chr3R 20261499 20261530 -7643523 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 739 183 139 0 0 chr3R 20268176 20268212 -7636841 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 739 186 43 0 0 chr3R 20268607 20268630 -7636423 + (T)n Simple_repeat Simple_repeat 1 23 0 5 739 237 119 0 0 chr3R 20269751 20269793 -7635260 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 739 23 78 0 0 chr3R 20270539 20270590 -7634463 + AT_rich Low_complexity Low_complexity 1 51 0 5 739 24 0 0 0 chr3R 20272487 20272511 -7632542 + AT_rich Low_complexity Low_complexity 1 24 0 5 739 228 149 0 0 chr3R 20272584 20272631 -7632422 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 739 241 226 0 0 chr3R 20274507 20274560 -7630493 + GA-rich Low_complexity Low_complexity 1 53 0 5 739 213 39 0 0 chr3R 20276701 20276727 -7628326 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 739 323 164 0 0 chr3R 20277832 20277899 -7627154 - ROO_I LTR Pao -7528 728 662 5 739 234 91 0 0 chr3R 20278102 20278135 -7626918 + (CTG)n Simple_repeat Simple_repeat 3 35 0 5 739 189 107 0 0 chr3R 20278939 20278967 -7626086 + (TA)n Simple_repeat Simple_repeat 1 28 0 5 739 267 133 0 0 chr3R 20278998 20279043 -7626010 + (GTCTG)n Simple_repeat Simple_repeat 5 49 0 5 739 180 0 0 0 chr3R 20279596 20279616 -7625437 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 739 247 209 0 0 chr3R 20279803 20279870 -7625183 - ROO_I LTR Pao -7534 722 656 5 739 195 42 0 0 chr3R 20280062 20280086 -7624967 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 739 198 71 0 0 chr3R 20280881 20280909 -7624144 + (GCTG)n Simple_repeat Simple_repeat 3 30 0 5 739 303 122 0 0 chr3R 20281127 20281176 -7623877 + (TA)n Simple_repeat Simple_repeat 1 49 0 5 739 192 184 0 0 chr3R 20281333 20281382 -7623671 + (GCTG)n Simple_repeat Simple_repeat 3 51 0 5 739 309 197 0 0 chr3R 20281979 20282050 -7623003 + (TCTG)n Simple_repeat Simple_repeat 1 71 0 5 739 255 260 21 10 chr3R 20282719 20282816 -7622237 + T-rich Low_complexity Low_complexity 4 101 0 5 739 218 271 0 0 chr3R 20283943 20283991 -7621062 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 739 345 269 56 48 chr3R 20284637 20284887 -7620166 + XDMR_DM Unknown Unknown 108 359 -1 5 739 1314 282 27 24 chr3R 20284695 20285357 -7619696 - SAR_DM Satellite Satellite -593 879 216 5 739 419 265 11 29 chr3R 20285216 20285391 -7619662 + XDMR Unknown Unknown 1 172 -189 5 739 363 231 33 26 chr3R 20285396 20285547 -7619506 - SAR_DM Satellite Satellite -718 754 603 5 739 189 180 0 0 chr3R 20286960 20287010 -7618043 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 739 216 245 0 0 chr3R 20289325 20289374 -7615679 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 739 23 0 0 0 chr3R 20289887 20289910 -7615143 + AT_rich Low_complexity Low_complexity 1 23 0 5 739 237 83 0 0 chr3R 20290596 20290632 -7614421 + (TC)n Simple_repeat Simple_repeat 2 37 0 5 739 225 146 0 0 chr3R 20290833 20290881 -7614172 + (TTTTTG)n Simple_repeat Simple_repeat 4 51 0 5 739 201 129 0 0 chr3R 20292911 20292942 -7612111 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 739 213 178 0 0 chr3R 20293547 20293592 -7611461 + A-rich Low_complexity Low_complexity 1 45 0 5 739 186 71 0 0 chr3R 20296641 20296669 -7608384 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 739 204 279 0 0 chr3R 20296765 20296826 -7608227 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 739 23 33 0 0 chr3R 20297208 20297238 -7607815 + AT_rich Low_complexity Low_complexity 1 30 0 5 739 22 0 0 0 chr3R 20300636 20300658 -7604395 + AT_rich Low_complexity Low_complexity 1 22 0 5 739 181 0 69 0 chr3R 20302811 20302840 -7602213 + (GGATG)n Simple_repeat Simple_repeat 5 35 0 5 739 372 88 0 0 chr3R 20303347 20303404 -7601649 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 739 189 74 0 0 chr3R 20305313 20305340 -7599713 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 5 739 34 0 0 0 chr3R 20307133 20307167 -7597886 + AT_rich Low_complexity Low_complexity 1 34 0 5 739 234 62 0 0 chr3R 20307318 20307350 -7597703 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 739 204 154 0 25 chr3R 20309454 20309494 -7595559 + (CATTC)n Simple_repeat Simple_repeat 4 42 0 5 739 201 234 0 0 chr3R 20310490 20310554 -7594499 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 740 189 107 0 0 chr3R 20318274 20318302 -7586751 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 5 740 1005 39 0 0 chr3R 20319054 20319183 -7585870 + BS LINE Jockey 4998 5126 0 5 740 258 56 0 0 chr3R 20319183 20319219 -7585834 + (A)n Simple_repeat Simple_repeat 1 36 0 5 740 24 0 0 0 chr3R 20319967 20319991 -7585062 + AT_rich Low_complexity Low_complexity 1 24 0 5 740 195 42 0 0 chr3R 20320181 20320205 -7584848 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 5 740 192 40 0 0 chr3R 20321608 20321633 -7583420 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 740 281 100 0 20 chr3R 20324882 20324933 -7580120 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 740 30 0 0 0 chr3R 20330194 20330224 -7574829 + AT_rich Low_complexity Low_complexity 1 30 0 5 740 1063 56 0 40 chr3R 20331867 20332016 -7573037 + DNAREP1_DM LINE Penelope 1 143 -451 5 740 332 111 0 0 chr3R 20332022 20332067 -7572986 + DNAREP1_DM LINE Penelope 550 594 0 5 740 205 267 0 0 chr3R 20337450 20337510 -7567543 + (CAAA)n Simple_repeat Simple_repeat 4 63 0 5 740 180 0 0 0 chr3R 20338471 20338491 -7566562 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 740 37 0 0 0 chr3R 20339223 20339260 -7565793 + AT_rich Low_complexity Low_complexity 1 37 0 5 740 205 300 0 0 chr3R 20346428 20346498 -7558555 + A-rich Low_complexity Low_complexity 1 70 0 5 740 234 62 0 0 chr3R 20346611 20346643 -7558410 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 740 180 0 0 0 chr3R 20347590 20347610 -7557443 + (CAATC)n Simple_repeat Simple_repeat 2 21 0 5 740 282 198 62 10 chr3R 20347942 20348039 -7557014 + A-rich Low_complexity Low_complexity 3 104 0 5 740 210 154 0 0 chr3R 20350794 20350833 -7554220 + A-rich Low_complexity Low_complexity 1 39 0 5 740 21 36 0 0 chr3R 20352636 20352664 -7552389 + AT_rich Low_complexity Low_complexity 1 28 0 5 740 26 0 0 0 chr3R 20356233 20356259 -7548794 + AT_rich Low_complexity Low_complexity 1 26 0 5 740 35 41 0 0 chr3R 20367451 20367500 -7537553 + AT_rich Low_complexity Low_complexity 1 49 0 5 740 231 167 20 20 chr3R 20368178 20368227 -7536826 - Ulysses_I LTR Gypsy -6033 348 300 5 740 31 58 0 0 chr3R 20370104 20370156 -7534897 + AT_rich Low_complexity Low_complexity 1 52 0 5 740 23 33 0 0 chr3R 20375496 20375526 -7529527 + AT_rich Low_complexity Low_complexity 1 30 0 5 740 186 71 0 0 chr3R 20375667 20375695 -7529358 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 5 740 210 71 0 0 chr3R 20379819 20379847 -7525206 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 5 740 203 184 0 0 chr3R 20379984 20380022 -7525031 + T-rich Low_complexity Low_complexity 1 38 0 5 740 22 0 0 0 chr3R 20382581 20382603 -7522450 + AT_rich Low_complexity Low_complexity 1 22 0 5 740 198 71 0 0 chr3R 20383540 20383568 -7521485 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 740 28 29 0 0 chr3R 20383600 20383635 -7521418 + AT_rich Low_complexity Low_complexity 1 35 0 5 740 28 61 0 0 chr3R 20383806 20383855 -7521198 + AT_rich Low_complexity Low_complexity 1 49 0 5 740 223 174 0 0 chr3R 20384630 20384676 -7520377 + T-rich Low_complexity Low_complexity 1 46 0 5 740 28 0 0 0 chr3R 20384734 20384762 -7520291 + AT_rich Low_complexity Low_complexity 1 28 0 5 740 180 0 0 0 chr3R 20384922 20384942 -7520111 + (TATATG)n Simple_repeat Simple_repeat 3 22 0 5 740 243 140 0 0 chr3R 20388103 20388153 -7516900 + (CTG)n Simple_repeat Simple_repeat 1 50 0 5 740 324 236 0 33 chr3R 20388327 20388419 -7516634 - ROO_I LTR Pao -7513 743 655 5 740 200 86 29 0 chr3R 20390487 20390522 -7514531 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 740 206 32 32 0 chr3R 20402432 20402463 -7502590 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 740 22 0 0 0 chr3R 20403466 20403488 -7501565 + AT_rich Low_complexity Low_complexity 1 22 0 5 740 389 244 39 13 chr3R 20406213 20406367 -7498686 - XDMR_DM Unknown Unknown -201 159 2 5 740 586 248 47 41 chr3R 20406255 20406575 -7498478 + SAR_DM Satellite Satellite 572 893 -579 5 740 233 161 17 35 chr3R 20406526 20406584 -7498469 - ARS406_DM Unknown Unknown -194 159 103 5 740 255 164 18 18 chr3R 20407994 20408050 -7497003 + (CAG)n Simple_repeat Simple_repeat 3 58 0 5 740 27 29 0 0 chr3R 20408691 20408725 -7496328 + AT_rich Low_complexity Low_complexity 1 34 0 5 740 246 136 0 0 chr3R 20410692 20410736 -7494317 + (TTC)n Simple_repeat Simple_repeat 2 45 0 5 740 198 0 0 0 chr3R 20413102 20413124 -7491929 + (CATGC)n Simple_repeat Simple_repeat 3 24 0 5 740 198 0 0 0 chr3R 20413368 20413390 -7491663 + (CAAA)n Simple_repeat Simple_repeat 4 25 0 5 740 220 220 0 0 chr3R 20415216 20415266 -7489787 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 740 243 172 15 30 chr3R 20415333 20415421 -7489632 + (CAA)n Simple_repeat Simple_repeat 1 86 0 5 740 275 49 24 0 chr3R 20416177 20416218 -7488835 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 740 252 158 53 0 chr3R 20416540 20416597 -7488456 + ROO_I LTR Pao 667 726 -7530 5 740 234 81 0 0 chr3R 20418602 20418639 -7486414 + (T)n Simple_repeat Simple_repeat 1 37 0 5 740 180 0 0 0 chr3R 20419168 20419188 -7485865 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 740 384 111 0 0 chr3R 20419340 20419403 -7485650 + (CACTC)n Simple_repeat Simple_repeat 2 64 0 5 740 180 77 0 0 chr3R 20420292 20420318 -7484735 + (ATG)n Simple_repeat Simple_repeat 2 27 0 5 740 1682 0 5 0 chr3R 20420411 20420596 -7484457 + POGON1 DNA Pogo 1 186 0 5 740 1131 52 0 0 chr3R 20422149 20422304 -7482749 + (TAGA)n Simple_repeat Simple_repeat 3 157 0 5 740 210 156 0 0 chr3R 20422446 20422491 -7482562 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 740 180 111 0 0 chr3R 20423350 20423377 -7481676 + (TTGG)n Simple_repeat Simple_repeat 4 30 0 5 740 240 86 0 0 chr3R 20426404 20426439 -7478614 + (CATA)n Simple_repeat Simple_repeat 2 36 0 5 740 195 146 0 0 chr3R 20427518 20427559 -7477494 + (CCCA)n Simple_repeat Simple_repeat 2 42 0 5 740 312 27 0 0 chr3R 20427848 20427885 -7477168 + (TAG)n Simple_repeat Simple_repeat 3 39 0 5 740 199 68 67 22 chr3R 20428431 20428476 -7476577 + (CAAAC)n Simple_repeat Simple_repeat 5 51 0 5 740 195 42 0 0 chr3R 20431093 20431117 -7473936 + (TTGG)n Simple_repeat Simple_repeat 4 27 0 5 740 471 15 0 42 chr3R 20431297 20431368 -7473685 + (CATA)n Simple_repeat Simple_repeat 1 68 0 5 740 242 160 0 0 chr3R 20433165 20433215 -7471838 + ROO_I LTR Pao 689 738 -7518 5 740 207 182 0 0 chr3R 20435393 20435426 -7469627 + (CACCAT)n Simple_repeat Simple_repeat 2 34 0 5 740 201 234 0 0 chr3R 20435484 20435531 -7469522 + (CAGC)n Simple_repeat Simple_repeat 4 50 0 5 740 227 208 0 0 chr3R 20435661 20435709 -7469344 + T-rich Low_complexity Low_complexity 1 48 0 5 740 246 62 0 0 chr3R 20438050 20438082 -7466971 + (AACTG)n Simple_repeat Simple_repeat 4 35 0 5 740 36 0 0 0 chr3R 20439340 20439376 -7465677 + AT_rich Low_complexity Low_complexity 1 36 0 5 740 255 152 0 0 chr3R 20440073 20440119 -7464934 + T-rich Low_complexity Low_complexity 1 46 0 5 740 183 42 0 0 chr3R 20440940 20440964 -7464089 + (CACTC)n Simple_repeat Simple_repeat 3 26 0 5 740 318 115 0 0 chr3R 20442052 20442104 -7462949 + (CAG)n Simple_repeat Simple_repeat 1 52 0 5 740 229 128 0 133 chr3R 20444815 20444905 -7460148 + ROO_I LTR Pao 651 728 -7528 5 740 240 293 0 0 chr3R 20445023 20445098 -7459955 + (CAG)n Simple_repeat Simple_repeat 3 77 0 5 740 384 286 5 53 chr3R 20445567 20445755 -7459298 + (CAG)n Simple_repeat Simple_repeat 1 179 0 5 740 186 43 0 0 chr3R 20446009 20446032 -7459021 + (A)n Simple_repeat Simple_repeat 1 23 0 5 740 219 171 24 0 chr3R 20447002 20447043 -7458010 + (TTG)n Simple_repeat Simple_repeat 1 42 0 5 741 200 350 0 0 chr3R 20450488 20450591 -7454462 + (TCG)n Simple_repeat Simple_repeat 3 105 0 5 741 240 111 0 0 chr3R 20459497 20459533 -7445520 + (CAA)n Simple_repeat Simple_repeat 1 36 0 5 741 23 33 0 0 chr3R 20460208 20460238 -7444815 + AT_rich Low_complexity Low_complexity 1 30 0 5 741 233 262 0 35 chr3R 20463998 20464085 -7440968 - ROO_I LTR Pao -7530 726 643 5 741 316 219 0 0 chr3R 20464118 20464200 -7440853 - ROO_I LTR Pao -7530 726 645 5 741 192 125 0 0 chr3R 20472691 20472723 -7432330 + (CAG)n Simple_repeat Simple_repeat 3 34 0 5 741 32 26 0 0 chr3R 20474139 20474178 -7430875 + AT_rich Low_complexity Low_complexity 1 39 0 5 741 213 39 0 0 chr3R 20477038 20477064 -7427989 + (GA)n Simple_repeat Simple_repeat 2 27 0 5 741 201 225 0 0 chr3R 20477083 20477123 -7427930 + (CGGGG)n Simple_repeat Simple_repeat 4 43 0 5 741 25 31 0 0 chr3R 20485121 20485153 -7419900 + AT_rich Low_complexity Low_complexity 1 32 0 5 741 22 35 0 0 chr3R 20485211 20485240 -7419813 + AT_rich Low_complexity Low_complexity 1 29 0 5 741 23 0 0 0 chr3R 20487693 20487716 -7417337 + AT_rich Low_complexity Low_complexity 1 23 0 5 741 210 71 0 0 chr3R 20488016 20488044 -7417009 + (CACCAT)n Simple_repeat Simple_repeat 1 28 0 5 741 25 31 0 0 chr3R 20489876 20489908 -7415145 + AT_rich Low_complexity Low_complexity 1 32 0 5 741 209 33 33 0 chr3R 20490958 20490988 -7414065 + (CAAT)n Simple_repeat Simple_repeat 4 34 0 5 741 181 0 69 0 chr3R 20493979 20494008 -7411045 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 741 36 40 0 0 chr3R 20497247 20497297 -7407756 + AT_rich Low_complexity Low_complexity 1 50 0 5 741 261 183 0 62 chr3R 20499725 20499789 -7405264 + CT-rich Low_complexity Low_complexity 3 62 0 5 741 197 83 0 27 chr3R 20501050 20501087 -7403966 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 741 216 67 0 0 chr3R 20501551 20501581 -7403472 + (A)n Simple_repeat Simple_repeat 1 30 0 5 741 207 0 0 0 chr3R 20503281 20503304 -7401749 + (A)n Simple_repeat Simple_repeat 1 23 0 5 741 22 0 0 0 chr3R 20503693 20503715 -7401338 + AT_rich Low_complexity Low_complexity 1 22 0 5 741 201 113 62 46 chr3R 20508537 20508602 -7396451 + (CAATC)n Simple_repeat Simple_repeat 5 70 0 5 741 209 59 59 0 chr3R 20508741 20508775 -7396278 + (CAAT)n Simple_repeat Simple_repeat 3 38 0 5 741 183 42 0 0 chr3R 20508825 20508849 -7396204 + (CAA)n Simple_repeat Simple_repeat 1 24 0 5 741 216 184 0 0 chr3R 20509829 20509878 -7395175 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 741 279 0 0 0 chr3R 20509925 20509956 -7395097 + (TAA)n Simple_repeat Simple_repeat 2 32 0 5 741 184 111 22 22 chr3R 20512507 20512553 -7392500 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 741 204 40 0 0 chr3R 20512725 20512750 -7392303 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 741 240 200 0 0 chr3R 20513668 20513748 -7391305 + (CA)n Simple_repeat Simple_repeat 1 80 0 5 741 28 0 0 0 chr3R 20514470 20514498 -7390555 + AT_rich Low_complexity Low_complexity 1 28 0 5 741 419 128 12 0 chr3R 20518728 20518814 -7386239 + (CA)n Simple_repeat Simple_repeat 2 88 0 5 741 195 69 0 0 chr3R 20519634 20519663 -7385390 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 5 741 240 59 0 0 chr3R 20519688 20519722 -7385331 + (CTA)n Simple_repeat Simple_repeat 2 35 0 5 741 203 114 23 0 chr3R 20520483 20520527 -7384526 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 741 21 0 0 0 chr3R 20521035 20521056 -7383997 + AT_rich Low_complexity Low_complexity 1 21 0 5 741 21 0 0 0 chr3R 20521492 20521513 -7383540 + AT_rich Low_complexity Low_complexity 1 21 0 5 741 23 0 0 0 chr3R 20524832 20524855 -7380198 + AT_rich Low_complexity Low_complexity 1 23 0 5 741 368 91 15 0 chr3R 20525168 20525234 -7379819 + (TC)n Simple_repeat Simple_repeat 1 67 0 5 741 182 171 24 0 chr3R 20526001 20526042 -7379011 + (TATCG)n Simple_repeat Simple_repeat 4 45 0 5 741 189 121 0 0 chr3R 20528911 20528944 -7376109 + (CGG)n Simple_repeat Simple_repeat 1 33 0 5 741 194 62 31 0 chr3R 20529061 20529093 -7375960 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 741 209 214 0 0 chr3R 20529486 20529528 -7375525 + (CTCA)n Simple_repeat Simple_repeat 2 43 0 5 741 273 204 0 0 chr3R 20529928 20529982 -7375071 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 741 23 54 0 0 chr3R 20530582 20530619 -7374434 + AT_rich Low_complexity Low_complexity 1 37 0 5 741 207 0 0 0 chr3R 20531184 20531207 -7373846 + (CGAAT)n Simple_repeat Simple_repeat 4 26 0 5 741 29 28 0 0 chr3R 20533757 20533793 -7371260 + AT_rich Low_complexity Low_complexity 1 36 0 5 741 669 24 0 0 chr3R 20535755 20535837 -7369216 + DM412B_LTR LTR Gypsy 483 564 -7 5 741 23 0 0 0 chr3R 20535892 20535915 -7369138 + AT_rich Low_complexity Low_complexity 1 23 0 5 741 264 111 0 0 chr3R 20536045 20536090 -7368963 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 741 21 0 0 0 chr3R 20536804 20536825 -7368228 + AT_rich Low_complexity Low_complexity 1 21 0 5 741 26 30 0 0 chr3R 20537315 20537348 -7367705 + AT_rich Low_complexity Low_complexity 1 33 0 5 741 28 0 0 0 chr3R 20538334 20538362 -7366691 + AT_rich Low_complexity Low_complexity 1 28 0 5 741 219 266 0 0 chr3R 20542400 20542479 -7362574 + (CAG)n Simple_repeat Simple_repeat 2 80 0 5 741 227 181 0 98 chr3R 20542504 20542596 -7362457 + ROO_I LTR Pao 662 744 -7512 5 741 319 141 13 13 chr3R 20542611 20542690 -7362363 + (CAG)n Simple_repeat Simple_repeat 3 81 0 5 741 22 0 0 0 chr3R 20543477 20543499 -7361554 + AT_rich Low_complexity Low_complexity 1 22 0 5 741 496 314 4 4 chr3R 20546301 20546573 -7358480 + (CTG)n Simple_repeat Simple_repeat 1 272 0 5 741 21 0 0 0 chr3R 20548371 20548392 -7356661 + AT_rich Low_complexity Low_complexity 1 21 0 5 741 183 80 0 0 chr3R 20550246 20550271 -7354782 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 5 741 324 102 0 0 chr3R 20551927 20551976 -7353077 + (CCA)n Simple_repeat Simple_repeat 3 51 0 5 741 26 0 0 0 chr3R 20553135 20553161 -7351892 + AT_rich Low_complexity Low_complexity 1 26 0 5 741 21 57 0 0 chr3R 20555324 20555359 -7349694 + AT_rich Low_complexity Low_complexity 1 35 0 5 741 21277 0 0 1 chr3R 20555876 20558187 -7346866 - DOC LINE Jockey 0 4725 2417 5 741 198 0 0 0 chr3R 20558244 20558266 -7346787 + (A)n Simple_repeat Simple_repeat 1 22 0 5 741 213 39 0 0 chr3R 20558602 20558628 -7346425 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 741 207 196 20 0 chr3R 20559109 20559160 -7345893 + (CGG)n Simple_repeat Simple_repeat 1 52 0 5 741 186 143 0 0 chr3R 20559182 20559217 -7345836 + (GAGTG)n Simple_repeat Simple_repeat 1 35 0 5 741 210 264 0 0 chr3R 20560705 20560758 -7344295 + (CATA)n Simple_repeat Simple_repeat 4 56 0 5 741 183 156 0 0 chr3R 20563447 20563479 -7341574 + (CACCAT)n Simple_repeat Simple_repeat 6 37 0 5 741 232 241 0 0 chr3R 20570213 20570271 -7334782 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 742 213 39 0 0 chr3R 20587530 20587556 -7317497 + (CTG)n Simple_repeat Simple_repeat 3 28 0 5 742 21 36 0 0 chr3R 20592569 20592597 -7312456 + AT_rich Low_complexity Low_complexity 1 28 0 5 742 236 288 0 12 chr3R 20593706 20593787 -7311266 + CT-rich Low_complexity Low_complexity 2 81 0 5 742 231 103 0 0 chr3R 20593871 20593910 -7311143 + (TTC)n Simple_repeat Simple_repeat 3 41 0 5 742 183 100 0 0 chr3R 20594269 20594299 -7310754 + (TTG)n Simple_repeat Simple_repeat 1 30 0 5 742 192 77 0 0 chr3R 20595439 20595465 -7309588 + (CAG)n Simple_repeat Simple_repeat 2 27 0 5 742 192 77 0 0 chr3R 20595512 20595538 -7309515 + (CGGGG)n Simple_repeat Simple_repeat 4 29 0 5 742 180 77 0 0 chr3R 20595989 20596015 -7309038 + (CATATA)n Simple_repeat Simple_repeat 1 26 0 5 742 22 0 0 0 chr3R 20599248 20599270 -7305783 + AT_rich Low_complexity Low_complexity 1 22 0 5 742 22 0 0 0 chr3R 20600051 20600073 -7304980 + AT_rich Low_complexity Low_complexity 1 22 0 5 742 192 40 0 0 chr3R 20600408 20600433 -7304620 + (A)n Simple_repeat Simple_repeat 1 25 0 5 742 34 55 0 0 chr3R 20602150 20602205 -7302848 + AT_rich Low_complexity Low_complexity 1 55 0 5 742 252 100 0 0 chr3R 20603356 20603396 -7301657 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 742 216 86 0 0 chr3R 20616295 20616330 -7288723 + (CATAC)n Simple_repeat Simple_repeat 2 36 0 5 742 240 111 0 0 chr3R 20619128 20619164 -7285889 + (CACCAT)n Simple_repeat Simple_repeat 3 38 0 5 742 27 49 0 0 chr3R 20620258 20620299 -7284754 + AT_rich Low_complexity Low_complexity 1 41 0 5 742 480 132 0 0 chr3R 20621945 20622028 -7283025 + (CAG)n Simple_repeat Simple_repeat 1 83 0 5 742 29 28 0 0 chr3R 20624454 20624490 -7280563 + AT_rich Low_complexity Low_complexity 1 36 0 5 742 242 161 18 18 chr3R 20626077 20626134 -7278919 + (CTG)n Simple_repeat Simple_repeat 3 59 0 5 742 22 70 0 0 chr3R 20629894 20629937 -7275116 + AT_rich Low_complexity Low_complexity 1 43 0 5 742 21 0 0 0 chr3R 20636607 20636628 -7268425 + AT_rich Low_complexity Low_complexity 1 21 0 5 742 21 57 0 0 chr3R 20638688 20638723 -7266330 + AT_rich Low_complexity Low_complexity 1 35 0 5 742 26 50 0 0 chr3R 20642949 20642989 -7262064 + AT_rich Low_complexity Low_complexity 1 40 0 5 742 291 100 0 0 chr3R 20651760 20651800 -7253253 + DNAREP1_DM LINE Penelope 21 60 -534 5 742 959 160 149 37 chr3R 20651836 20652050 -7253003 + DNAREP1_DM LINE Penelope 357 594 0 5 742 21 0 0 0 chr3R 20655883 20655904 -7249149 + AT_rich Low_complexity Low_complexity 1 21 0 5 742 23 33 0 0 chr3R 20664074 20664104 -7240949 + AT_rich Low_complexity Low_complexity 1 30 0 5 742 234 0 0 0 chr3R 20666053 20666079 -7238974 + (TAA)n Simple_repeat Simple_repeat 2 27 0 5 742 21 0 0 0 chr3R 20669731 20669752 -7235301 + AT_rich Low_complexity Low_complexity 1 21 0 5 742 183 42 0 0 chr3R 20672403 20672427 -7232626 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 5 742 192 77 0 0 chr3R 20672567 20672593 -7232460 + (TAA)n Simple_repeat Simple_repeat 2 27 0 5 742 36 91 0 0 chr3R 20677121 20677220 -7227833 + AT_rich Low_complexity Low_complexity 1 99 0 5 742 21 36 0 0 chr3R 20680554 20680582 -7224471 + AT_rich Low_complexity Low_complexity 1 28 0 5 742 26 30 0 0 chr3R 20690771 20690804 -7214249 + AT_rich Low_complexity Low_complexity 1 33 0 5 742 192 125 0 0 chr3R 20692275 20692307 -7212746 + (TGG)n Simple_repeat Simple_repeat 2 33 0 5 742 25 0 0 0 chr3R 20694328 20694353 -7210700 + AT_rich Low_complexity Low_complexity 1 25 0 5 742 25 0 0 0 chr3R 20696817 20696842 -7208211 + AT_rich Low_complexity Low_complexity 1 25 0 5 742 22 0 0 0 chr3R 20696993 20697015 -7208038 + AT_rich Low_complexity Low_complexity 1 22 0 5 742 257 0 30 0 chr3R 20697098 20697131 -7207922 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 742 244 164 15 15 chr3R 20701839 20701907 -7203146 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 742 180 163 0 0 chr3R 20702098 20702141 -7202912 + (TTG)n Simple_repeat Simple_repeat 3 45 0 5 742 38 39 0 0 chr3R 20702475 20702527 -7202526 + AT_rich Low_complexity Low_complexity 1 52 0 5 743 38 0 0 0 chr3R 20714662 20714700 -7190353 + AT_rich Low_complexity Low_complexity 1 38 0 5 743 231 88 0 0 chr3R 20715535 20715569 -7189484 + (CAGT)n Simple_repeat Simple_repeat 1 34 0 5 743 231 36 0 0 chr3R 20717441 20717469 -7187584 + (CAT)n Simple_repeat Simple_repeat 3 30 0 5 743 203 32 65 0 chr3R 20719656 20719687 -7185366 + (CAGAA)n Simple_repeat Simple_repeat 3 35 0 5 743 204 97 0 0 chr3R 20720008 20720039 -7185014 + (T)n Simple_repeat Simple_repeat 1 31 0 5 743 22 70 0 0 chr3R 20721077 20721120 -7183933 + AT_rich Low_complexity Low_complexity 1 43 0 5 743 21 0 0 0 chr3R 20723116 20723137 -7181916 + AT_rich Low_complexity Low_complexity 1 21 0 5 743 21 0 0 0 chr3R 20723295 20723316 -7181737 + AT_rich Low_complexity Low_complexity 1 21 0 5 743 282 218 13 13 chr3R 20724010 20724089 -7180964 + (TGG)n Simple_repeat Simple_repeat 2 80 0 5 743 186 43 0 0 chr3R 20724093 20724116 -7180937 + (CTG)n Simple_repeat Simple_repeat 1 23 0 5 743 230 273 11 22 chr3R 20725589 20725679 -7179374 + (TTG)n Simple_repeat Simple_repeat 3 91 0 5 743 180 0 0 0 chr3R 20729938 20729958 -7175095 + (A)n Simple_repeat Simple_repeat 1 20 0 5 743 25 0 0 0 chr3R 20730788 20730813 -7174240 + AT_rich Low_complexity Low_complexity 1 25 0 5 743 23 54 0 0 chr3R 20730914 20730951 -7174102 + AT_rich Low_complexity Low_complexity 1 37 0 5 743 25 0 0 0 chr3R 20730978 20731003 -7174050 + AT_rich Low_complexity Low_complexity 1 25 0 5 743 251 220 0 0 chr3R 20731279 20731338 -7173715 + T-rich Low_complexity Low_complexity 1 59 0 5 743 21 0 0 0 chr3R 20734780 20734801 -7170252 + AT_rich Low_complexity Low_complexity 1 21 0 5 743 31 0 0 0 chr3R 20735343 20735374 -7169679 + AT_rich Low_complexity Low_complexity 1 31 0 5 743 21 0 0 0 chr3R 20736030 20736051 -7169002 + AT_rich Low_complexity Low_complexity 1 21 0 5 743 314 80 20 0 chr3R 20736663 20736713 -7168340 + (CAG)n Simple_repeat Simple_repeat 3 53 0 5 743 195 42 0 0 chr3R 20737759 20737783 -7167270 + (GCTG)n Simple_repeat Simple_repeat 3 26 0 5 743 28 29 0 0 chr3R 20743695 20743730 -7161323 + AT_rich Low_complexity Low_complexity 1 35 0 5 743 41492 1 0 0 chr3R 20752907 20757632 -7147421 + DOC LINE Jockey 2 4725 0 5 743 23 33 0 0 chr3R 20760592 20760622 -7144431 + AT_rich Low_complexity Low_complexity 1 30 0 5 743 192 40 0 0 chr3R 20760905 20760930 -7144123 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 743 239 254 14 0 chr3R 20763917 20763988 -7141065 + (TG)n Simple_repeat Simple_repeat 2 73 0 5 743 237 167 0 0 chr3R 20765252 20765306 -7139747 + (CTG)n Simple_repeat Simple_repeat 1 54 0 5 743 22 35 0 0 chr3R 20768441 20768470 -7136583 + AT_rich Low_complexity Low_complexity 1 29 0 5 743 23 0 0 0 chr3R 20769537 20769560 -7135493 + AT_rich Low_complexity Low_complexity 1 23 0 5 743 202 205 0 0 chr3R 20770196 20770235 -7134818 + (TCG)n Simple_repeat Simple_repeat 1 39 0 5 743 200 167 42 0 chr3R 20770382 20770430 -7134623 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 743 374 116 0 59 chr3R 20780566 20780667 -7124386 + (TAGA)n Simple_repeat Simple_repeat 2 96 0 5 743 426 274 35 46 chr3R 20790738 20790983 -7114070 + SAR_DM Satellite Satellite 1 242 -684 5 743 229 255 62 67 chr3R 20790855 20791065 -7113988 - XDMR_DM Unknown Unknown -10 350 142 5 743 289 307 51 41 chr3R 20791056 20791372 -7113681 + SAR_DM Satellite Satellite 584 902 -570 5 743 264 170 0 0 chr3R 20796055 20796108 -7108945 + (CCCGAA)n Simple_repeat Simple_repeat 1 53 0 5 743 180 0 0 0 chr3R 20796343 20796363 -7108690 + (CTG)n Simple_repeat Simple_repeat 2 21 0 5 743 273 57 0 0 chr3R 20797596 20797631 -7107422 + (GGA)n Simple_repeat Simple_repeat 2 36 0 5 743 211 227 15 15 chr3R 20798312 20798379 -7106674 + (CA)n Simple_repeat Simple_repeat 1 67 0 5 743 21 36 0 0 chr3R 20798636 20798664 -7106389 + AT_rich Low_complexity Low_complexity 1 28 0 5 743 186 167 0 0 chr3R 20801267 20801303 -7103750 + (ACTG)n Simple_repeat Simple_repeat 1 36 0 5 743 215 208 0 0 chr3R 20801644 20801692 -7103361 + GA-rich Low_complexity Low_complexity 4 51 0 5 743 279 146 0 0 chr3R 20802500 20802555 -7102498 + (TA)n Simple_repeat Simple_repeat 1 55 0 5 743 195 69 0 0 chr3R 20804996 20805025 -7100028 + (A)n Simple_repeat Simple_repeat 1 29 0 5 743 348 293 17 17 chr3R 20809341 20809518 -7095535 + (CAA)n Simple_repeat Simple_repeat 3 179 0 5 743 258 116 0 0 chr3R 20810749 20810792 -7094261 + (CAG)n Simple_repeat Simple_repeat 2 44 0 5 743 222 150 0 0 chr3R 20810805 20810845 -7094208 + (CAT)n Simple_repeat Simple_repeat 1 40 0 5 743 198 209 0 0 chr3R 20811050 20811093 -7093960 + T-rich Low_complexity Low_complexity 1 43 0 5 743 28 79 0 0 chr3R 20811891 20811954 -7093099 + AT_rich Low_complexity Low_complexity 1 63 0 5 743 227 114 0 22 chr3R 20815556 20815601 -7089452 + (CAAAC)n Simple_repeat Simple_repeat 2 45 0 5 743 24 0 0 0 chr3R 20816853 20816877 -7088176 + AT_rich Low_complexity Low_complexity 1 24 0 5 743 22 0 0 0 chr3R 20818891 20818913 -7086140 + AT_rich Low_complexity Low_complexity 1 22 0 5 743 219 96 0 55 chr3R 20819078 20819133 -7085920 + (CATAC)n Simple_repeat Simple_repeat 5 56 0 5 743 253 254 0 0 chr3R 20823055 20823114 -7081939 + (CAG)n Simple_repeat Simple_repeat 1 59 0 5 743 204 167 0 0 chr3R 20823644 20823692 -7081361 + (CATCG)n Simple_repeat Simple_repeat 2 49 0 5 743 225 163 0 0 chr3R 20824580 20824629 -7080424 + A-rich Low_complexity Low_complexity 1 49 0 5 743 222 91 0 0 chr3R 20825470 20825503 -7079550 + (CATCC)n Simple_repeat Simple_repeat 4 36 0 5 743 203 0 37 0 chr3R 20826250 20826277 -7078776 + (TAAAA)n Simple_repeat Simple_repeat 4 31 0 5 743 300 111 0 0 chr3R 20828054 20828099 -7076954 + (ACTG)n Simple_repeat Simple_repeat 4 48 0 5 743 189 0 0 0 chr3R 20831322 20831343 -7073710 + (TCG)n Simple_repeat Simple_repeat 2 22 0 5 743 206 135 0 26 chr3R 20833965 20834003 -7071050 + (CAGC)n Simple_repeat Simple_repeat 2 38 0 5 743 197 108 0 26 chr3R 20834613 20834651 -7070402 + (CTG)n Simple_repeat Simple_repeat 2 38 0 5 743 336 217 0 0 chr3R 20835080 20835140 -7069913 + G-rich Low_complexity Low_complexity 4 63 0 5 743 183 80 0 0 chr3R 20836112 20836137 -7068916 + (ACTG)n Simple_repeat Simple_repeat 2 26 0 5 744 186 118 0 0 chr3R 20846734 20846768 -7058285 + (CCA)n Simple_repeat Simple_repeat 2 35 0 5 744 183 218 0 0 chr3R 20847912 20847967 -7057086 + (CAGAT)n Simple_repeat Simple_repeat 4 58 0 5 744 195 129 0 0 chr3R 20847965 20847996 -7057057 + (AGTTG)n Simple_repeat Simple_repeat 5 35 0 5 744 38 0 0 0 chr3R 20848536 20848574 -7056479 + AT_rich Low_complexity Low_complexity 1 38 0 5 744 22 35 0 0 chr3R 20860067 20860096 -7044957 + AT_rich Low_complexity Low_complexity 1 29 0 5 744 24 32 0 0 chr3R 20867324 20867355 -7037698 + AT_rich Low_complexity Low_complexity 1 31 0 5 744 23 0 0 0 chr3R 20872966 20872989 -7032064 + AT_rich Low_complexity Low_complexity 1 23 0 5 744 21 82 0 0 chr3R 20891378 20891427 -7013626 + AT_rich Low_complexity Low_complexity 1 49 0 5 744 189 0 0 0 chr3R 20902911 20902932 -7002121 + (CCTG)n Simple_repeat Simple_repeat 1 21 0 5 744 29 70 0 0 chr3R 20903765 20903822 -7001231 + AT_rich Low_complexity Low_complexity 1 57 0 5 744 23 86 0 0 chr3R 20905768 20905826 -6999227 + AT_rich Low_complexity Low_complexity 1 58 0 5 744 206 273 0 0 chr3R 20907422 20907477 -6997576 + (CCCCAG)n Simple_repeat Simple_repeat 2 56 0 5 744 236 120 20 0 chr3R 20907519 20907569 -6997484 + (CAG)n Simple_repeat Simple_repeat 2 52 0 5 744 22 0 0 0 chr3R 20907939 20907961 -6997092 + AT_rich Low_complexity Low_complexity 1 22 0 5 744 200 197 66 0 chr3R 20910429 20910490 -6994563 + (TATG)n Simple_repeat Simple_repeat 4 68 0 5 744 23 0 0 0 chr3R 20910618 20910641 -6994412 + AT_rich Low_complexity Low_complexity 1 23 0 5 744 22 70 0 0 chr3R 20911268 20911311 -6993742 + AT_rich Low_complexity Low_complexity 1 43 0 5 744 656 148 82 41 chr3R 20913162 20913381 -6991672 - Jockey2 LINE Jockey -18 3410 3183 5 744 227 217 14 42 chr3R 20913662 20913734 -6991319 + DNAREP1_DM LINE Penelope 500 569 -25 5 744 383 78 0 15 chr3R 20916691 20916756 -6988297 + (CACTC)n Simple_repeat Simple_repeat 5 68 0 5 744 207 250 0 35 chr3R 20917637 20917695 -6987358 + (CATA)n Simple_repeat Simple_repeat 4 59 0 5 744 227 51 77 0 chr3R 20917888 20917927 -6987126 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 5 744 225 0 0 0 chr3R 20918301 20918326 -6986727 + (ACCG)n Simple_repeat Simple_repeat 4 28 0 5 744 23 68 0 0 chr3R 20918682 20918726 -6986327 + AT_rich Low_complexity Low_complexity 1 44 0 5 744 30 59 0 0 chr3R 20929346 20929397 -6975656 + AT_rich Low_complexity Low_complexity 1 51 0 5 744 22 35 0 0 chr3R 20931756 20931785 -6973268 + AT_rich Low_complexity Low_complexity 1 29 0 5 744 21 0 0 0 chr3R 20931959 20931980 -6973073 + AT_rich Low_complexity Low_complexity 1 21 0 5 744 22 35 0 0 chr3R 20933521 20933550 -6971503 + AT_rich Low_complexity Low_complexity 1 29 0 5 744 21 36 0 0 chr3R 20934249 20934277 -6970776 + AT_rich Low_complexity Low_complexity 1 28 0 5 744 24 0 0 0 chr3R 20934463 20934487 -6970566 + AT_rich Low_complexity Low_complexity 1 24 0 5 744 21 57 0 0 chr3R 20934827 20934862 -6970191 + AT_rich Low_complexity Low_complexity 1 35 0 5 744 23 54 0 0 chr3R 20934955 20934992 -6970061 + AT_rich Low_complexity Low_complexity 1 37 0 5 744 26 0 0 0 chr3R 20936416 20936442 -6968611 + AT_rich Low_complexity Low_complexity 1 26 0 5 744 25 0 0 0 chr3R 20938547 20938572 -6966481 + AT_rich Low_complexity Low_complexity 1 25 0 5 744 22 0 0 0 chr3R 20941769 20941791 -6963262 + AT_rich Low_complexity Low_complexity 1 22 0 5 744 34 24 0 0 chr3R 20942130 20942171 -6962882 + AT_rich Low_complexity Low_complexity 1 41 0 5 744 25 31 0 0 chr3R 20942979 20943011 -6962042 + AT_rich Low_complexity Low_complexity 1 32 0 5 744 22 94 0 0 chr3R 20943041 20943105 -6961948 + AT_rich Low_complexity Low_complexity 1 64 0 5 744 29 0 0 0 chr3R 20949048 20949077 -6955976 + AT_rich Low_complexity Low_complexity 1 29 0 5 744 24 0 0 0 chr3R 20950161 20950185 -6954868 + AT_rich Low_complexity Low_complexity 1 24 0 5 744 237 167 0 0 chr3R 20957516 20957570 -6947483 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 744 21 71 0 0 chr3R 20957988 20958030 -6947023 + AT_rich Low_complexity Low_complexity 1 42 0 5 744 328 184 0 0 chr3R 20958869 20958956 -6946097 + ROO_I LTR Pao 643 729 -7527 5 744 31 0 0 0 chr3R 20960626 20960657 -6944396 + AT_rich Low_complexity Low_complexity 1 31 0 5 744 27 0 0 0 chr3R 20961720 20961747 -6943306 + AT_rich Low_complexity Low_complexity 1 27 0 5 744 23 54 0 0 chr3R 20962354 20962391 -6942662 + AT_rich Low_complexity Low_complexity 1 37 0 5 744 25 0 0 0 chr3R 20963050 20963075 -6941978 + AT_rich Low_complexity Low_complexity 1 25 0 5 744 25 51 0 0 chr3R 20965906 20965945 -6939108 + AT_rich Low_complexity Low_complexity 1 39 0 5 744 397 255 27 41 chr3R 20968255 20968402 -6936651 - XDMR_DM Unknown Unknown -213 147 3 5 744 2740 258 29 31 chr3R 20968284 20970050 -6935003 + SAR_DM Satellite Satellite 1 1762 -203 5 745 183 80 0 0 chr3R 20972929 20972954 -6932099 + (CGGT)n Simple_repeat Simple_repeat 1 25 0 5 745 180 213 0 0 chr3R 20973356 20973417 -6931636 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 745 21 71 0 0 chr3R 20974918 20974960 -6930093 + AT_rich Low_complexity Low_complexity 1 42 0 5 745 294 73 0 0 chr3R 20976826 20976867 -6928186 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 745 22 0 0 0 chr3R 20978177 20978199 -6926854 + AT_rich Low_complexity Low_complexity 1 22 0 5 745 213 39 0 0 chr3R 20978657 20978683 -6926370 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 745 207 186 0 0 chr3R 20978708 20978751 -6926302 + (TGAG)n Simple_repeat Simple_repeat 4 46 0 5 745 219 152 0 0 chr3R 20979009 20979055 -6925998 + (GAGTG)n Simple_repeat Simple_repeat 3 48 0 5 745 243 140 0 0 chr3R 20979301 20979351 -6925702 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 745 186 133 0 0 chr3R 20979460 20979490 -6925563 + (TATATG)n Simple_repeat Simple_repeat 4 33 0 5 745 31 0 0 0 chr3R 20981853 20981884 -6923169 + AT_rich Low_complexity Low_complexity 1 31 0 5 745 227 175 0 0 chr3R 20982743 20982783 -6922270 + (CGGTG)n Simple_repeat Simple_repeat 5 44 0 5 745 185 65 32 0 chr3R 20982932 20982963 -6922090 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 745 201 163 0 0 chr3R 20983086 20983135 -6921918 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 745 195 42 0 0 chr3R 20984609 20984633 -6920420 + (TATAG)n Simple_repeat Simple_repeat 3 26 0 5 745 195 100 0 0 chr3R 20986452 20986482 -6918571 + (CTG)n Simple_repeat Simple_repeat 2 31 0 5 745 243 61 0 0 chr3R 20986518 20986551 -6918502 + (CGAGT)n Simple_repeat Simple_repeat 2 34 0 5 745 213 108 0 0 chr3R 20987942 20987979 -6917074 + (CAG)n Simple_repeat Simple_repeat 2 38 0 5 745 363 106 0 0 chr3R 20989512 20989578 -6915475 + (CAG)n Simple_repeat Simple_repeat 3 68 0 5 745 24 0 0 0 chr3R 20990630 20990654 -6914399 + AT_rich Low_complexity Low_complexity 1 24 0 5 745 180 0 0 0 chr3R 20990901 20990921 -6914132 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 745 264 130 0 0 chr3R 20992485 20992531 -6912522 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 745 228 232 0 0 chr3R 20992614 20992670 -6912383 + (CTG)n Simple_repeat Simple_repeat 1 56 0 5 745 285 128 0 0 chr3R 20992853 20992900 -6912153 + (TCCG)n Simple_repeat Simple_repeat 2 48 0 5 745 23 68 0 0 chr3R 20993295 20993339 -6911714 + AT_rich Low_complexity Low_complexity 1 44 0 5 745 192 125 0 0 chr3R 20993644 20993676 -6911377 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 745 263 72 0 23 chr3R 20994513 20994556 -6910497 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 745 22 0 0 0 chr3R 20996155 20996177 -6908876 + AT_rich Low_complexity Low_complexity 1 22 0 5 745 195 139 0 0 chr3R 21000460 21000496 -6904557 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 745 219 88 0 0 chr3R 21005696 21005730 -6899323 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 745 180 158 0 0 chr3R 21007638 21007676 -6897377 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 745 240 100 0 0 chr3R 21009418 21009458 -6895595 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 745 187 179 0 29 chr3R 21010201 21010270 -6894783 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 745 246 220 0 0 chr3R 21010430 21010489 -6894564 + GA-rich Low_complexity Low_complexity 2 60 0 5 745 30 27 0 0 chr3R 21011271 21011308 -6893745 + AT_rich Low_complexity Low_complexity 1 37 0 5 745 23 33 0 0 chr3R 21011548 21011578 -6893475 + AT_rich Low_complexity Low_complexity 1 30 0 5 745 38 0 0 0 chr3R 21011677 21011715 -6893338 + AT_rich Low_complexity Low_complexity 1 38 0 5 745 33 43 0 0 chr3R 21012020 21012067 -6892986 + AT_rich Low_complexity Low_complexity 1 47 0 5 745 25 0 0 0 chr3R 21012159 21012184 -6892869 + AT_rich Low_complexity Low_complexity 1 25 0 5 745 189 74 0 0 chr3R 21012878 21012905 -6892148 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 745 24 0 0 0 chr3R 21013735 21013759 -6891294 + AT_rich Low_complexity Low_complexity 1 24 0 5 745 318 138 0 0 chr3R 21014293 21014351 -6890702 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 745 231 140 0 0 chr3R 21014552 21014602 -6890451 + (CTG)n Simple_repeat Simple_repeat 3 52 0 5 745 217 132 0 0 chr3R 21015900 21015938 -6889115 + (GGA)n Simple_repeat Simple_repeat 1 38 0 5 745 195 42 0 0 chr3R 21018111 21018135 -6886918 + (CATTG)n Simple_repeat Simple_repeat 2 25 0 5 745 30 89 0 0 chr3R 21018438 21018517 -6886536 + AT_rich Low_complexity Low_complexity 1 79 0 5 745 183 42 0 0 chr3R 21019650 21019674 -6885379 + (CTTTA)n Simple_repeat Simple_repeat 5 28 0 5 745 21 0 0 0 chr3R 21022491 21022512 -6882541 + AT_rich Low_complexity Low_complexity 1 21 0 5 745 28 71 0 0 chr3R 21023928 21023984 -6881069 + AT_rich Low_complexity Low_complexity 1 56 0 5 745 26 50 0 0 chr3R 21024514 21024554 -6880499 + AT_rich Low_complexity Low_complexity 1 40 0 5 745 23 0 0 0 chr3R 21041690 21041713 -6863340 + AT_rich Low_complexity Low_complexity 1 23 0 5 745 21 71 0 0 chr3R 21061484 21061526 -6843527 + AT_rich Low_complexity Low_complexity 1 42 0 5 745 32 26 0 0 chr3R 21062812 21062851 -6842202 + AT_rich Low_complexity Low_complexity 1 39 0 5 745 23 0 0 0 chr3R 21062985 21063008 -6842045 + AT_rich Low_complexity Low_complexity 1 23 0 5 745 31 0 0 0 chr3R 21063115 21063146 -6841907 + AT_rich Low_complexity Low_complexity 1 31 0 5 745 210 150 0 0 chr3R 21063162 21063202 -6841851 + (CAA)n Simple_repeat Simple_repeat 3 42 0 5 745 39 0 0 0 chr3R 21071419 21071458 -6833595 + AT_rich Low_complexity Low_complexity 1 39 0 5 745 24 0 0 0 chr3R 21072028 21072052 -6833001 + AT_rich Low_complexity Low_complexity 1 24 0 5 745 33 66 0 0 chr3R 21074767 21074828 -6830225 + AT_rich Low_complexity Low_complexity 1 61 0 5 745 228 86 0 0 chr3R 21078681 21078716 -6826337 + (CAG)n Simple_repeat Simple_repeat 2 36 0 5 745 198 150 0 0 chr3R 21086310 21086350 -6818703 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 745 201 234 0 0 chr3R 21092761 21092808 -6812245 + GA-rich Low_complexity Low_complexity 3 49 0 5 745 34 0 0 0 chr3R 21093503 21093537 -6811516 + AT_rich Low_complexity Low_complexity 1 34 0 5 745 24 77 0 0 chr3R 21098932 21098984 -6806069 + AT_rich Low_complexity Low_complexity 1 52 0 5 746 21 36 0 0 chr3R 21114606 21114634 -6790419 + AT_rich Low_complexity Low_complexity 1 28 0 5 746 23 0 0 0 chr3R 21114823 21114846 -6790207 + AT_rich Low_complexity Low_complexity 1 23 0 5 746 21 36 0 0 chr3R 21117086 21117114 -6787939 + AT_rich Low_complexity Low_complexity 1 28 0 5 746 21 0 0 0 chr3R 21118786 21118807 -6786246 + AT_rich Low_complexity Low_complexity 1 21 0 5 746 32 0 0 0 chr3R 21121620 21121652 -6783401 + AT_rich Low_complexity Low_complexity 1 32 0 5 746 23 33 0 0 chr3R 21125457 21125487 -6779566 + AT_rich Low_complexity Low_complexity 1 30 0 5 746 21 0 0 0 chr3R 21128023 21128044 -6777009 + AT_rich Low_complexity Low_complexity 1 21 0 5 746 21 36 0 0 chr3R 21128204 21128232 -6776821 + AT_rich Low_complexity Low_complexity 1 28 0 5 746 24 0 0 0 chr3R 21131096 21131120 -6773933 + AT_rich Low_complexity Low_complexity 1 24 0 5 746 21 0 0 0 chr3R 21138937 21138958 -6766095 + AT_rich Low_complexity Low_complexity 1 21 0 5 746 238 224 0 0 chr3R 21146050 21146108 -6758945 + DNAREP1_DM LINE Penelope 3 60 -534 5 746 40988 6 1 3 chr3R 21150133 21154660 -6750393 - DOC LINE Jockey -1 4724 209 5 746 22 35 0 0 chr3R 21157113 21157142 -6747911 + AT_rich Low_complexity Low_complexity 1 29 0 5 746 22 35 0 0 chr3R 21157268 21157297 -6747756 + AT_rich Low_complexity Low_complexity 1 29 0 5 746 28 0 0 0 chr3R 21157378 21157406 -6747647 + AT_rich Low_complexity Low_complexity 1 28 0 5 746 41 66 0 0 chr3R 21158745 21158821 -6746232 + AT_rich Low_complexity Low_complexity 1 76 0 5 746 21 0 0 0 chr3R 21169471 21169492 -6735561 + AT_rich Low_complexity Low_complexity 1 21 0 5 746 29 0 0 0 chr3R 21174412 21174441 -6730612 + AT_rich Low_complexity Low_complexity 1 29 0 5 746 233 232 0 0 chr3R 21175215 21175271 -6729782 + T-rich Low_complexity Low_complexity 1 56 0 5 746 222 105 0 0 chr3R 21177389 21177427 -6727626 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 746 201 94 0 0 chr3R 21177748 21177780 -6727273 + (TTG)n Simple_repeat Simple_repeat 1 32 0 5 746 22 35 0 0 chr3R 21183456 21183485 -6721568 + AT_rich Low_complexity Low_complexity 1 29 0 5 746 26 74 0 0 chr3R 21185832 21185886 -6719167 + AT_rich Low_complexity Low_complexity 1 54 0 5 746 44 20 0 0 chr3R 21201248 21201299 -6703754 + AT_rich Low_complexity Low_complexity 1 51 0 5 746 223 288 0 0 chr3R 21202551 21202610 -6702443 + G-rich Low_complexity Low_complexity 5 63 0 5 746 234 105 0 0 chr3R 21204279 21204317 -6700736 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 746 22 0 0 0 chr3R 21206381 21206403 -6698650 + AT_rich Low_complexity Low_complexity 1 22 0 5 746 210 37 0 0 chr3R 21208764 21208791 -6696262 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 746 236 137 20 0 chr3R 21212304 21212355 -6692698 + (CAGAA)n Simple_repeat Simple_repeat 3 54 0 5 746 24 0 0 0 chr3R 21214477 21214501 -6690552 + AT_rich Low_complexity Low_complexity 1 24 0 5 746 200 267 17 0 chr3R 21214623 21214683 -6690370 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 746 213 139 0 0 chr3R 21216127 21216170 -6688883 + (T)n Simple_repeat Simple_repeat 1 43 0 5 746 219 69 0 0 chr3R 21220180 21220209 -6684844 + (CTG)n Simple_repeat Simple_repeat 1 29 0 5 746 263 240 13 13 chr3R 21223101 21223177 -6681876 + (CTG)n Simple_repeat Simple_repeat 2 77 0 5 746 334 227 0 22 chr3R 21224028 21224306 -6680747 + (TTG)n Simple_repeat Simple_repeat 1 271 0 5 746 312 221 0 0 chr3R 21224314 21224391 -6680662 + (TGG)n Simple_repeat Simple_repeat 3 79 0 5 746 330 226 0 0 chr3R 21224407 21224544 -6680509 + (TGG)n Simple_repeat Simple_repeat 3 139 0 5 746 253 239 0 32 chr3R 21224594 21224780 -6680273 + (TGG)n Simple_repeat Simple_repeat 1 180 0 5 746 281 218 0 21 chr3R 21224749 21224894 -6680159 + (TTG)n Simple_repeat Simple_repeat 1 142 0 5 746 280 239 0 0 chr3R 21224902 21224973 -6680080 + (TGG)n Simple_repeat Simple_repeat 3 73 0 5 746 314 224 0 12 chr3R 21224977 21225229 -6679824 + (TTG)n Simple_repeat Simple_repeat 1 248 0 5 746 399 221 0 0 chr3R 21225229 21225387 -6679666 + (TGG)n Simple_repeat Simple_repeat 3 160 0 5 746 249 238 0 0 chr3R 21225427 21225549 -6679504 + (TGG)n Simple_repeat Simple_repeat 3 124 0 5 746 387 221 0 0 chr3R 21225583 21225741 -6679312 + (TGG)n Simple_repeat Simple_repeat 3 160 0 5 746 370 202 0 34 chr3R 21225706 21225885 -6679168 + (TTG)n Simple_repeat Simple_repeat 3 175 0 5 746 23 33 0 0 chr3R 21226845 21226875 -6678178 + AT_rich Low_complexity Low_complexity 1 30 0 5 746 375 60 0 0 chr3R 21231143 21231193 -6673860 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 747 22 0 0 0 chr3R 21239234 21239256 -6665797 + AT_rich Low_complexity Low_complexity 1 22 0 5 747 22 35 0 0 chr3R 21242746 21242775 -6662278 + AT_rich Low_complexity Low_complexity 1 29 0 5 747 24 0 0 0 chr3R 21247346 21247370 -6657683 + AT_rich Low_complexity Low_complexity 1 24 0 5 747 21 36 0 0 chr3R 21249228 21249256 -6655797 + AT_rich Low_complexity Low_complexity 1 28 0 5 747 198 0 0 0 chr3R 21249694 21249716 -6655337 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 747 25 0 0 0 chr3R 21253539 21253564 -6651489 + AT_rich Low_complexity Low_complexity 1 25 0 5 747 203 156 0 0 chr3R 21253868 21253900 -6651153 + (CATA)n Simple_repeat Simple_repeat 4 35 0 5 747 202 200 0 0 chr3R 21254983 21255023 -6650030 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 747 21 82 0 0 chr3R 21255723 21255772 -6649281 + AT_rich Low_complexity Low_complexity 1 49 0 5 747 25 51 0 0 chr3R 21257182 21257221 -6647832 + AT_rich Low_complexity Low_complexity 1 39 0 5 747 30 0 0 0 chr3R 21257241 21257271 -6647782 + AT_rich Low_complexity Low_complexity 1 30 0 5 747 334 137 0 0 chr3R 21257331 21257382 -6647671 - DNAREP1_DM LINE Penelope -543 51 1 5 747 240 57 29 0 chr3R 21257966 21258001 -6647052 + HOBO DNA hAT 1 36 -2980 5 747 22 0 0 0 chr3R 21258575 21258597 -6646456 + AT_rich Low_complexity Low_complexity 1 22 0 5 747 204 125 0 0 chr3R 21261310 21261342 -6643711 + (TGAG)n Simple_repeat Simple_repeat 3 34 0 5 747 21 36 0 0 chr3R 21261711 21261739 -6643314 + AT_rich Low_complexity Low_complexity 1 28 0 5 747 183 156 0 0 chr3R 21262601 21262633 -6642420 + (CGAAT)n Simple_repeat Simple_repeat 3 34 0 5 747 186 171 0 0 chr3R 21263344 21263385 -6641668 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 5 747 26 50 0 0 chr3R 21263846 21263886 -6641167 + AT_rich Low_complexity Low_complexity 1 40 0 5 747 23 0 0 0 chr3R 21264465 21264488 -6640565 + AT_rich Low_complexity Low_complexity 1 23 0 5 747 36 0 0 0 chr3R 21264599 21264635 -6640418 + AT_rich Low_complexity Low_complexity 1 36 0 5 747 25 0 0 0 chr3R 21265348 21265373 -6639680 + AT_rich Low_complexity Low_complexity 1 25 0 5 747 195 42 0 0 chr3R 21268804 21268828 -6636225 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 747 26 0 0 0 chr3R 21271267 21271293 -6633760 + AT_rich Low_complexity Low_complexity 1 26 0 5 747 180 0 0 0 chr3R 21271665 21271685 -6633368 + (TGAA)n Simple_repeat Simple_repeat 2 21 0 5 747 228 154 0 0 chr3R 21271769 21271833 -6633220 + (CAA)n Simple_repeat Simple_repeat 1 64 0 5 747 252 244 23 0 chr3R 21272148 21272234 -6632819 + (CTG)n Simple_repeat Simple_repeat 2 89 0 5 747 25 0 0 0 chr3R 21274517 21274542 -6630511 + AT_rich Low_complexity Low_complexity 1 25 0 5 747 222 91 0 0 chr3R 21275328 21275361 -6629692 + (CAG)n Simple_repeat Simple_repeat 3 35 0 5 747 23 33 0 0 chr3R 21275620 21275650 -6629403 + AT_rich Low_complexity Low_complexity 1 30 0 5 747 195 69 0 0 chr3R 21276214 21276243 -6628810 + (AGTTG)n Simple_repeat Simple_repeat 2 30 0 5 747 21 0 0 0 chr3R 21276695 21276716 -6628337 + AT_rich Low_complexity Low_complexity 1 21 0 5 747 252 0 0 0 chr3R 21280355 21280383 -6624670 + (T)n Simple_repeat Simple_repeat 1 28 0 5 747 223 163 0 0 chr3R 21282443 21282486 -6622567 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 747 226 0 59 0 chr3R 21283850 21283884 -6621169 + (CAAAAA)n Simple_repeat Simple_repeat 3 38 0 5 747 21 36 0 0 chr3R 21284221 21284249 -6620804 + AT_rich Low_complexity Low_complexity 1 28 0 5 747 39 104 0 0 chr3R 21285154 21285298 -6619755 + AT_rich Low_complexity Low_complexity 1 144 0 5 747 23 33 0 0 chr3R 21290393 21290423 -6614630 + AT_rich Low_complexity Low_complexity 1 30 0 5 747 26 0 0 0 chr3R 21291500 21291526 -6613527 + AT_rich Low_complexity Low_complexity 1 26 0 5 747 21 0 0 0 chr3R 21292887 21292908 -6612145 + AT_rich Low_complexity Low_complexity 1 21 0 5 747 228 209 0 0 chr3R 21293602 21293645 -6611408 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 747 24 0 0 0 chr3R 21294608 21294632 -6610421 + AT_rich Low_complexity Low_complexity 1 24 0 5 747 24 53 0 0 chr3R 21297398 21297436 -6607617 + AT_rich Low_complexity Low_complexity 1 38 0 5 747 237 125 17 35 chr3R 21298263 21298321 -6606732 + (TTG)n Simple_repeat Simple_repeat 1 57 0 5 747 203 200 0 22 chr3R 21298359 21298405 -6606648 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 747 189 0 0 0 chr3R 21307146 21307167 -6597886 + (TCC)n Simple_repeat Simple_repeat 2 22 0 5 747 36 62 0 0 chr3R 21315095 21315159 -6589894 + AT_rich Low_complexity Low_complexity 1 64 0 5 747 189 0 0 0 chr3R 21315898 21315919 -6589134 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 5 747 24 0 0 0 chr3R 21316328 21316352 -6588701 + AT_rich Low_complexity Low_complexity 1 24 0 5 747 23 0 0 0 chr3R 21316800 21316823 -6588230 + AT_rich Low_complexity Low_complexity 1 23 0 5 747 23 33 0 0 chr3R 21316841 21316871 -6588182 + AT_rich Low_complexity Low_complexity 1 30 0 5 747 26 30 0 0 chr3R 21316947 21316980 -6588073 + AT_rich Low_complexity Low_complexity 1 33 0 5 747 25 51 0 0 chr3R 21319085 21319124 -6585929 + AT_rich Low_complexity Low_complexity 1 39 0 5 747 35 24 0 0 chr3R 21319263 21319305 -6585748 + AT_rich Low_complexity Low_complexity 1 42 0 5 747 209 226 0 16 chr3R 21319804 21319867 -6585186 + A-rich Low_complexity Low_complexity 2 63 0 5 747 485 62 0 0 chr3R 21320248 21320312 -6584741 - PROTOP DNA P -3408 1072 1009 5 747 747 87 107 0 chr3R 21320313 21320463 -6584590 - PROTOP DNA P -3773 707 541 5 747 272 133 0 0 chr3R 21320522 21320567 -6584486 - PROTOP DNA P -4431 49 5 5 747 25 75 0 0 chr3R 21320616 21320669 -6584384 + AT_rich Low_complexity Low_complexity 1 53 0 5 747 30 69 0 0 chr3R 21320744 21320802 -6584251 + AT_rich Low_complexity Low_complexity 1 58 0 5 747 2735 114 71 6 chr3R 21321021 21321515 -6583538 + S_DM DNA Tc1 1 526 -1210 5 747 25 102 0 0 chr3R 21321733 21321821 -6583232 + AT_rich Low_complexity Low_complexity 1 88 0 5 747 28 0 0 0 chr3R 21322251 21322279 -6582774 + AT_rich Low_complexity Low_complexity 1 28 0 5 747 47 19 0 0 chr3R 21324789 21324843 -6580210 + AT_rich Low_complexity Low_complexity 1 54 0 5 747 26 30 0 0 chr3R 21324933 21324966 -6580087 + AT_rich Low_complexity Low_complexity 1 33 0 5 747 185 86 0 54 chr3R 21325307 21325344 -6579709 + (TTTTC)n Simple_repeat Simple_repeat 1 35 0 5 747 225 0 0 0 chr3R 21325581 21325606 -6579447 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 747 206 118 0 0 chr3R 21325796 21325830 -6579223 + (A)n Simple_repeat Simple_repeat 1 34 0 5 747 379 233 0 0 chr3R 21326426 21326512 -6578541 - DNAREP1_DM LINE Penelope 0 594 509 5 747 24 53 0 0 chr3R 21327576 21327614 -6577439 + AT_rich Low_complexity Low_complexity 1 38 0 5 747 186 43 0 0 chr3R 21327821 21327844 -6577209 + (CAGGA)n Simple_repeat Simple_repeat 4 26 0 5 747 30 0 0 0 chr3R 21328234 21328264 -6576789 + AT_rich Low_complexity Low_complexity 1 30 0 5 747 22 56 0 0 chr3R 21329021 21329057 -6575996 + AT_rich Low_complexity Low_complexity 1 36 0 5 747 30 27 0 0 chr3R 21331013 21331050 -6574003 + AT_rich Low_complexity Low_complexity 1 37 0 5 747 29 0 0 0 chr3R 21331637 21331666 -6573387 + AT_rich Low_complexity Low_complexity 1 29 0 5 747 21 36 0 0 chr3R 21333934 21333962 -6571091 + AT_rich Low_complexity Low_complexity 1 28 0 5 747 28 0 0 0 chr3R 21334128 21334156 -6570897 + AT_rich Low_complexity Low_complexity 1 28 0 5 747 33 43 0 0 chr3R 21334730 21334777 -6570276 + AT_rich Low_complexity Low_complexity 1 47 0 5 747 27 0 0 0 chr3R 21338727 21338754 -6566299 + AT_rich Low_complexity Low_complexity 1 27 0 5 747 26 0 0 0 chr3R 21341094 21341120 -6563933 + AT_rich Low_complexity Low_complexity 1 26 0 5 747 50 51 0 0 chr3R 21341536 21341614 -6563439 + AT_rich Low_complexity Low_complexity 1 78 0 5 747 231 175 17 17 chr3R 21344548 21344606 -6560447 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 747 21 0 0 0 chr3R 21348182 21348203 -6556850 + AT_rich Low_complexity Low_complexity 1 21 0 5 747 206 62 31 0 chr3R 21351594 21351626 -6553427 + (GCCTG)n Simple_repeat Simple_repeat 3 35 0 5 747 211 292 10 10 chr3R 21352306 21352403 -6552650 + (TA)n Simple_repeat Simple_repeat 2 98 0 5 747 207 69 0 0 chr3R 21353789 21353818 -6551235 + (CAGAC)n Simple_repeat Simple_repeat 1 29 0 5 747 32 26 0 0 chr3R 21358444 21358483 -6546570 + AT_rich Low_complexity Low_complexity 1 39 0 5 747 24 0 0 0 chr3R 21361366 21361390 -6543663 + AT_rich Low_complexity Low_complexity 1 24 0 5 748 22 70 0 0 chr3R 21365502 21365545 -6539508 + AT_rich Low_complexity Low_complexity 1 43 0 5 748 25 0 0 0 chr3R 21366190 21366215 -6538838 + AT_rich Low_complexity Low_complexity 1 25 0 5 748 207 0 0 0 chr3R 21366317 21366340 -6538713 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 748 21 0 0 0 chr3R 21366653 21366674 -6538379 + AT_rich Low_complexity Low_complexity 1 21 0 5 748 210 167 0 0 chr3R 21367014 21367050 -6538003 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 748 22 0 0 0 chr3R 21376562 21376584 -6528469 + AT_rich Low_complexity Low_complexity 1 22 0 5 748 23 0 0 0 chr3R 21378125 21378148 -6526905 + AT_rich Low_complexity Low_complexity 1 23 0 5 748 35 41 0 0 chr3R 21381159 21381208 -6523845 + AT_rich Low_complexity Low_complexity 1 49 0 5 748 180 0 0 0 chr3R 21382869 21382889 -6522164 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 5 748 209 157 59 0 chr3R 21382954 21383005 -6522048 + (CGAAT)n Simple_repeat Simple_repeat 4 57 0 5 748 22 0 0 0 chr3R 21384899 21384921 -6520132 + AT_rich Low_complexity Low_complexity 1 22 0 5 748 226 270 0 0 chr3R 21385141 21385204 -6519849 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 748 203 250 33 0 chr3R 21392125 21392185 -6512868 + (CTG)n Simple_repeat Simple_repeat 3 64 0 5 748 27 49 0 0 chr3R 21393614 21393655 -6511398 + AT_rich Low_complexity Low_complexity 1 41 0 5 748 22 0 0 0 chr3R 21395608 21395630 -6509423 + AT_rich Low_complexity Low_complexity 1 22 0 5 748 21 36 0 0 chr3R 21396674 21396702 -6508351 + AT_rich Low_complexity Low_complexity 1 28 0 5 748 21 0 0 0 chr3R 21398139 21398160 -6506893 + AT_rich Low_complexity Low_complexity 1 21 0 5 748 231 157 0 0 chr3R 21398655 21398706 -6506347 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 748 212 175 0 0 chr3R 21400407 21400447 -6504606 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 5 748 21 0 0 0 chr3R 21402754 21402775 -6502278 + AT_rich Low_complexity Low_complexity 1 21 0 5 748 183 42 0 0 chr3R 21402958 21402982 -6502071 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 748 23 0 0 0 chr3R 21409699 21409722 -6495331 + AT_rich Low_complexity Low_complexity 1 23 0 5 748 213 219 0 0 chr3R 21412630 21412671 -6492382 + CT-rich Low_complexity Low_complexity 2 42 0 5 748 195 42 0 0 chr3R 21413681 21413705 -6491348 + (CCCTG)n Simple_repeat Simple_repeat 2 25 0 5 748 21 0 0 0 chr3R 21418818 21418839 -6486214 + AT_rich Low_complexity Low_complexity 1 21 0 5 748 27 0 0 0 chr3R 21419992 21420019 -6485034 + AT_rich Low_complexity Low_complexity 1 27 0 5 748 200 254 15 31 chr3R 21421558 21421623 -6483430 + GA-rich Low_complexity Low_complexity 5 68 0 5 748 257 294 0 0 chr3R 21422544 21422629 -6482424 + A-rich Low_complexity Low_complexity 1 85 0 5 748 231 103 0 0 chr3R 21426091 21426130 -6478923 + (CAG)n Simple_repeat Simple_repeat 1 39 0 5 748 186 133 0 0 chr3R 21426334 21426364 -6478689 + (CCG)n Simple_repeat Simple_repeat 2 31 0 5 748 22 0 0 0 chr3R 21428572 21428594 -6476459 + AT_rich Low_complexity Low_complexity 1 22 0 5 748 25 0 0 0 chr3R 21428646 21428671 -6476382 + AT_rich Low_complexity Low_complexity 1 25 0 5 748 26 64 0 0 chr3R 21428795 21428842 -6476211 + AT_rich Low_complexity Low_complexity 1 47 0 5 748 23 0 0 0 chr3R 21429272 21429295 -6475758 + AT_rich Low_complexity Low_complexity 1 23 0 5 748 21 57 0 0 chr3R 21430127 21430162 -6474891 + AT_rich Low_complexity Low_complexity 1 35 0 5 748 34 55 0 0 chr3R 21431222 21431277 -6473776 + AT_rich Low_complexity Low_complexity 1 55 0 5 748 22 0 0 0 chr3R 21432981 21433003 -6472050 + AT_rich Low_complexity Low_complexity 1 22 0 5 748 21 0 0 0 chr3R 21433053 21433074 -6471979 + AT_rich Low_complexity Low_complexity 1 21 0 5 748 180 77 0 0 chr3R 21433518 21433544 -6471509 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 748 209 33 0 32 chr3R 21434062 21434093 -6470960 + (TA)n Simple_repeat Simple_repeat 1 30 0 5 748 29 0 0 0 chr3R 21434781 21434810 -6470243 + AT_rich Low_complexity Low_complexity 1 29 0 5 748 996 289 63 45 chr3R 21434924 21436475 -6468578 + SAR_DM Satellite Satellite 1 1578 -406 5 748 28 0 0 0 chr3R 21436746 21436774 -6468279 + AT_rich Low_complexity Low_complexity 1 28 0 5 748 302 181 0 0 chr3R 21439777 21439871 -6465182 + ROO_I LTR Pao 639 732 -7524 5 748 243 157 0 0 chr3R 21445528 21445579 -6459474 + (CAG)n Simple_repeat Simple_repeat 3 53 0 5 748 27 0 0 0 chr3R 21447145 21447172 -6457881 + AT_rich Low_complexity Low_complexity 1 27 0 5 748 31 44 0 0 chr3R 21449646 21449691 -6455362 + AT_rich Low_complexity Low_complexity 1 45 0 5 748 25 0 0 0 chr3R 21452784 21452809 -6452244 + AT_rich Low_complexity Low_complexity 1 25 0 5 748 180 0 0 0 chr3R 21454148 21454168 -6450885 + (CAGT)n Simple_repeat Simple_repeat 1 20 0 5 748 294 173 0 0 chr3R 21461974 21462049 -6443004 + (CAGT)n Simple_repeat Simple_repeat 2 76 0 5 748 29 0 0 0 chr3R 21462990 21463019 -6442034 + AT_rich Low_complexity Low_complexity 1 29 0 5 748 213 238 0 0 chr3R 21467235 21467277 -6437776 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 5 748 213 39 0 0 chr3R 21470495 21470521 -6434532 + (GTTTG)n Simple_repeat Simple_repeat 5 30 0 5 748 21 0 0 0 chr3R 21472331 21472352 -6432701 + AT_rich Low_complexity Low_complexity 1 21 0 5 748 21 36 0 0 chr3R 21472434 21472462 -6432591 + AT_rich Low_complexity Low_complexity 1 28 0 5 748 26 0 0 0 chr3R 21473029 21473055 -6431998 + AT_rich Low_complexity Low_complexity 1 26 0 5 748 205 146 20 20 chr3R 21473474 21473523 -6431530 + T-rich Low_complexity Low_complexity 4 52 0 5 748 30 69 0 0 chr3R 21477233 21477291 -6427762 + AT_rich Low_complexity Low_complexity 1 58 0 5 748 26 0 0 0 chr3R 21478705 21478731 -6426322 + AT_rich Low_complexity Low_complexity 1 26 0 5 748 189 0 0 0 chr3R 21478908 21478929 -6426124 + (TAATG)n Simple_repeat Simple_repeat 1 21 0 5 748 198 174 0 0 chr3R 21479025 21479071 -6425982 + (CAATC)n Simple_repeat Simple_repeat 2 47 0 5 748 210 244 0 0 chr3R 21479564 21479605 -6425448 + (CTG)n Simple_repeat Simple_repeat 2 42 0 5 748 228 200 0 0 chr3R 21480136 21480191 -6424862 + (CTG)n Simple_repeat Simple_repeat 3 57 0 5 748 26 0 0 0 chr3R 21487111 21487137 -6417916 + AT_rich Low_complexity Low_complexity 1 26 0 5 748 22 0 0 0 chr3R 21487405 21487427 -6417626 + AT_rich Low_complexity Low_complexity 1 22 0 5 748 261 83 0 0 chr3R 21488535 21488571 -6416482 + (CAG)n Simple_repeat Simple_repeat 1 36 0 5 748 22 35 0 0 chr3R 21495450 21495479 -6409574 + AT_rich Low_complexity Low_complexity 1 29 0 5 749 27 49 0 0 chr3R 21510969 21511010 -6394043 + AT_rich Low_complexity Low_complexity 1 41 0 5 749 224 183 33 0 chr3R 21515147 21515207 -6389846 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 749 201 232 0 35 chr3R 21518136 21518194 -6386859 + (CAAAG)n Simple_repeat Simple_repeat 4 59 0 5 749 219 245 0 0 chr3R 21520806 21520855 -6384198 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 749 207 125 0 0 chr3R 21521600 21521640 -6383413 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 749 201 196 0 0 chr3R 21522324 21522370 -6382683 + (CAA)n Simple_repeat Simple_repeat 1 46 0 5 749 26 64 0 0 chr3R 21524394 21524441 -6380612 + AT_rich Low_complexity Low_complexity 1 47 0 5 749 257 159 16 0 chr3R 21525203 21525266 -6379787 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 749 189 0 0 0 chr3R 21525371 21525392 -6379661 + (TATATG)n Simple_repeat Simple_repeat 6 26 0 5 749 24 32 0 0 chr3R 21525833 21525864 -6379189 + AT_rich Low_complexity Low_complexity 1 31 0 5 749 26 0 0 0 chr3R 21526257 21526283 -6378770 + AT_rich Low_complexity Low_complexity 1 26 0 5 749 28 61 0 0 chr3R 21528470 21528519 -6376534 + AT_rich Low_complexity Low_complexity 1 49 0 5 749 318 138 0 0 chr3R 21530669 21530727 -6374326 + (ATG)n Simple_repeat Simple_repeat 3 60 0 5 749 183 42 0 0 chr3R 21530930 21530954 -6374099 + (TTCCG)n Simple_repeat Simple_repeat 2 25 0 5 749 253 204 0 0 chr3R 21536514 21536568 -6368485 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 749 195 42 0 0 chr3R 21536769 21536793 -6368260 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 749 23 0 0 0 chr3R 21536962 21536985 -6368068 + AT_rich Low_complexity Low_complexity 1 23 0 5 749 24 53 0 0 chr3R 21537165 21537203 -6367850 + AT_rich Low_complexity Low_complexity 1 38 0 5 749 21 0 0 0 chr3R 21542522 21542543 -6362510 + AT_rich Low_complexity Low_complexity 1 21 0 5 749 29 78 0 0 chr3R 21545608 21545672 -6359381 + AT_rich Low_complexity Low_complexity 1 64 0 5 749 189 74 0 0 chr3R 21549558 21549585 -6355468 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 749 222 62 0 0 chr3R 21549935 21549967 -6355086 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 749 3999 2 0 0 chr3R 21551605 21552033 -6353020 - ROO_LTR LTR Pao 0 428 1 5 749 48441 0 1 0 chr3R 21552033 21560279 -6344774 - ROO_I LTR Pao 0 8256 1 5 749 3742 2 0 0 chr3R 21560279 21560707 -6344346 - ROO_LTR LTR Pao 0 428 1 5 749 189 74 0 0 chr3R 21565225 21565252 -6339801 + (CTG)n Simple_repeat Simple_repeat 1 27 0 5 749 23 33 0 0 chr3R 21565712 21565742 -6339311 + AT_rich Low_complexity Low_complexity 1 30 0 5 749 22 0 0 0 chr3R 21567190 21567212 -6337841 + AT_rich Low_complexity Low_complexity 1 22 0 5 749 25 0 0 0 chr3R 21567535 21567560 -6337493 + AT_rich Low_complexity Low_complexity 1 25 0 5 749 255 243 13 13 chr3R 21574433 21574508 -6330545 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 749 351 96 0 0 chr3R 21575888 21575940 -6329113 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 749 204 231 0 0 chr3R 21576474 21576526 -6328527 + A-rich Low_complexity Low_complexity 1 52 0 5 749 188 34 0 33 chr3R 21578598 21578628 -6326425 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 749 21 57 0 0 chr3R 21580001 21580036 -6325017 + AT_rich Low_complexity Low_complexity 1 35 0 5 749 23 33 0 0 chr3R 21580755 21580785 -6324268 + AT_rich Low_complexity Low_complexity 1 30 0 5 749 209 217 22 0 chr3R 21582593 21582639 -6322414 + (CATA)n Simple_repeat Simple_repeat 2 48 0 5 749 33 0 0 0 chr3R 21582845 21582878 -6322175 + AT_rich Low_complexity Low_complexity 1 33 0 5 749 25 0 0 0 chr3R 21583230 21583255 -6321798 + AT_rich Low_complexity Low_complexity 1 25 0 5 749 209 189 0 0 chr3R 21588026 21588063 -6316990 + (CATA)n Simple_repeat Simple_repeat 4 40 0 5 749 29 28 0 0 chr3R 21588207 21588243 -6316810 + AT_rich Low_complexity Low_complexity 1 36 0 5 749 204 343 9 0 chr3R 21589621 21589729 -6315324 + (CAG)n Simple_repeat Simple_repeat 3 111 0 5 749 29 84 0 0 chr3R 21595403 21595474 -6309579 + AT_rich Low_complexity Low_complexity 1 71 0 5 749 21 36 0 0 chr3R 21595556 21595584 -6309469 + AT_rich Low_complexity Low_complexity 1 28 0 5 749 21 0 0 0 chr3R 21601012 21601033 -6304020 + AT_rich Low_complexity Low_complexity 1 21 0 5 749 23 33 0 0 chr3R 21603972 21604002 -6301051 + AT_rich Low_complexity Low_complexity 1 30 0 5 749 192 111 0 0 chr3R 21606374 21606410 -6298643 + (T)n Simple_repeat Simple_repeat 1 36 0 5 749 24 0 0 0 chr3R 21606945 21606969 -6298084 + AT_rich Low_complexity Low_complexity 1 24 0 5 749 330 45 0 0 chr3R 21608886 21608930 -6296123 + (TC)n Simple_repeat Simple_repeat 2 45 0 5 749 24 0 0 0 chr3R 21611717 21611741 -6293312 + AT_rich Low_complexity Low_complexity 1 24 0 5 749 23 0 0 0 chr3R 21613098 21613121 -6291932 + AT_rich Low_complexity Low_complexity 1 23 0 5 749 216 135 0 0 chr3R 21623806 21623843 -6281210 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 749 33 56 0 0 chr3R 21624465 21624519 -6280534 + AT_rich Low_complexity Low_complexity 1 54 0 5 750 189 0 0 0 chr3R 21632825 21632846 -6272207 + (T)n Simple_repeat Simple_repeat 1 21 0 5 750 186 103 0 0 chr3R 21632890 21632919 -6272134 + (TTTCG)n Simple_repeat Simple_repeat 4 32 0 5 750 186 103 0 0 chr3R 21633859 21633888 -6271165 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 750 22 0 0 0 chr3R 21636455 21636477 -6268576 + AT_rich Low_complexity Low_complexity 1 22 0 5 750 273 109 0 0 chr3R 21639465 21639511 -6265542 + (CATCG)n Simple_repeat Simple_repeat 5 50 0 5 750 195 42 0 0 chr3R 21642098 21642122 -6262931 + (CAG)n Simple_repeat Simple_repeat 3 26 0 5 750 27 62 0 0 chr3R 21643269 21643317 -6261736 + AT_rich Low_complexity Low_complexity 1 48 0 5 750 234 157 39 0 chr3R 21643838 21643889 -6261164 + (CAAAT)n Simple_repeat Simple_repeat 3 55 0 5 750 192 40 0 0 chr3R 21644069 21644094 -6260959 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 750 194 0 39 0 chr3R 21648408 21648434 -6256619 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 750 21 0 0 0 chr3R 21649069 21649090 -6255963 + AT_rich Low_complexity Low_complexity 1 21 0 5 750 25 0 0 0 chr3R 21652065 21652090 -6252963 + AT_rich Low_complexity Low_complexity 1 25 0 5 750 39 0 0 0 chr3R 21656220 21656259 -6248794 + AT_rich Low_complexity Low_complexity 1 39 0 5 750 21 0 0 0 chr3R 21657083 21657104 -6247949 + AT_rich Low_complexity Low_complexity 1 21 0 5 750 297 228 0 0 chr3R 21657405 21657484 -6247569 + (CAG)n Simple_repeat Simple_repeat 1 79 0 5 750 3766 0 0 0 chr3R 21658467 21658895 -6246158 + ROO_LTR LTR Pao 1 428 0 5 750 70402 0 0 2 chr3R 21658895 21667163 -6237890 + ROO_I LTR Pao 1 8256 0 5 750 3766 0 0 0 chr3R 21667163 21667591 -6237462 + ROO_LTR LTR Pao 1 428 0 5 750 21 36 0 0 chr3R 21669121 21669149 -6235904 + AT_rich Low_complexity Low_complexity 1 28 0 5 750 33 56 0 0 chr3R 21669401 21669455 -6235598 + AT_rich Low_complexity Low_complexity 1 54 0 5 750 22 0 0 0 chr3R 21669999 21670021 -6235032 + AT_rich Low_complexity Low_complexity 1 22 0 5 750 217 0 61 0 chr3R 21673751 21673784 -6231269 + (TTTTTG)n Simple_repeat Simple_repeat 1 35 0 5 750 23 33 0 0 chr3R 21674216 21674246 -6230807 + AT_rich Low_complexity Low_complexity 1 30 0 5 750 21 71 0 0 chr3R 21676044 21676086 -6228967 + AT_rich Low_complexity Low_complexity 1 42 0 5 750 229 258 32 0 chr3R 21680940 21681002 -6224051 + (TATATG)n Simple_repeat Simple_repeat 4 67 0 5 750 43 20 0 0 chr3R 21681415 21681465 -6223588 + AT_rich Low_complexity Low_complexity 1 50 0 5 750 234 150 0 0 chr3R 21682638 21682678 -6222375 + (CCG)n Simple_repeat Simple_repeat 2 41 0 5 750 183 42 0 0 chr3R 21684466 21684490 -6220563 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 5 750 22 35 0 0 chr3R 21688511 21688540 -6216513 + AT_rich Low_complexity Low_complexity 1 29 0 5 750 183 80 0 0 chr3R 21690076 21690101 -6214952 + (CTG)n Simple_repeat Simple_repeat 1 25 0 5 750 219 164 0 52 chr3R 21695764 21695822 -6209231 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 750 22 70 0 0 chr3R 21699861 21699904 -6205149 + AT_rich Low_complexity Low_complexity 1 43 0 5 750 25 0 0 0 chr3R 21704583 21704608 -6200445 + AT_rich Low_complexity Low_complexity 1 25 0 5 750 25 31 0 0 chr3R 21704997 21705029 -6200024 + AT_rich Low_complexity Low_complexity 1 32 0 5 750 22 35 0 0 chr3R 21706345 21706374 -6198679 + AT_rich Low_complexity Low_complexity 1 29 0 5 750 182 62 0 30 chr3R 21706374 21706407 -6198646 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 5 750 256 203 0 33 chr3R 21708179 21708260 -6196793 + (GAGTG)n Simple_repeat Simple_repeat 1 78 0 5 750 22 0 0 0 chr3R 21710219 21710241 -6194812 + AT_rich Low_complexity Low_complexity 1 22 0 5 750 24 77 0 0 chr3R 21710540 21710592 -6194461 + AT_rich Low_complexity Low_complexity 1 52 0 5 750 21 0 0 0 chr3R 21712790 21712811 -6192242 + AT_rich Low_complexity Low_complexity 1 21 0 5 750 195 100 0 0 chr3R 21714502 21714532 -6190521 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 750 251 164 36 0 chr3R 21718896 21718951 -6186102 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 5 750 216 286 0 0 chr3R 21720296 21720359 -6184694 + (CGG)n Simple_repeat Simple_repeat 2 64 0 5 750 201 94 0 0 chr3R 21720365 21720397 -6184656 + (GGA)n Simple_repeat Simple_repeat 1 32 0 5 750 183 100 0 0 chr3R 21720406 21720436 -6184617 + (CAG)n Simple_repeat Simple_repeat 3 32 0 5 750 302 241 0 0 chr3R 21720548 21720635 -6184418 + GA-rich Low_complexity Low_complexity 1 87 0 5 750 22 0 0 0 chr3R 21721036 21721058 -6183995 + AT_rich Low_complexity Low_complexity 1 22 0 5 750 27 49 0 0 chr3R 21722155 21722196 -6182857 + AT_rich Low_complexity Low_complexity 1 41 0 5 750 23 0 0 0 chr3R 21723051 21723074 -6181979 + AT_rich Low_complexity Low_complexity 1 23 0 5 750 22 56 0 0 chr3R 21725401 21725437 -6179616 + AT_rich Low_complexity Low_complexity 1 36 0 5 750 200 86 0 28 chr3R 21727283 21727319 -6177734 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 5 750 26 64 0 0 chr3R 21728571 21728618 -6176435 + AT_rich Low_complexity Low_complexity 1 47 0 5 750 21 0 0 0 chr3R 21731031 21731052 -6174001 + AT_rich Low_complexity Low_complexity 1 21 0 5 750 34 24 0 0 chr3R 21733048 21733089 -6171964 + AT_rich Low_complexity Low_complexity 1 41 0 5 750 23 33 0 0 chr3R 21734063 21734093 -6170960 + AT_rich Low_complexity Low_complexity 1 30 0 5 750 22 35 0 0 chr3R 21741382 21741411 -6163642 + AT_rich Low_complexity Low_complexity 1 29 0 5 750 25 31 0 0 chr3R 21742152 21742184 -6162869 + AT_rich Low_complexity Low_complexity 1 32 0 5 750 23 0 0 0 chr3R 21742918 21742941 -6162112 + AT_rich Low_complexity Low_complexity 1 23 0 5 750 30 0 0 0 chr3R 21743362 21743392 -6161661 + AT_rich Low_complexity Low_complexity 1 30 0 5 750 21 36 0 0 chr3R 21746783 21746811 -6158242 + AT_rich Low_complexity Low_complexity 1 28 0 5 750 31 26 0 0 chr3R 21747672 21747710 -6157343 + AT_rich Low_complexity Low_complexity 1 38 0 5 750 23 0 0 0 chr3R 21750319 21750342 -6154711 + AT_rich Low_complexity Low_complexity 1 23 0 5 750 30 27 0 0 chr3R 21750695 21750732 -6154321 + AT_rich Low_complexity Low_complexity 1 37 0 5 750 32 75 0 0 chr3R 21751045 21751112 -6153941 + AT_rich Low_complexity Low_complexity 1 67 0 5 750 24 0 0 0 chr3R 21752210 21752234 -6152819 + AT_rich Low_complexity Low_complexity 1 24 0 5 750 213 156 0 22 chr3R 21752698 21752744 -6152309 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 750 51 51 0 0 chr3R 21754408 21754487 -6150566 + AT_rich Low_complexity Low_complexity 1 79 0 5 751 23 0 0 0 chr3R 21764975 21764998 -6140055 + AT_rich Low_complexity Low_complexity 1 23 0 5 751 231 146 0 0 chr3R 21765546 21765587 -6139466 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 751 21 0 0 0 chr3R 21765857 21765878 -6139175 + AT_rich Low_complexity Low_complexity 1 21 0 5 751 25 51 0 0 chr3R 21767834 21767873 -6137180 + AT_rich Low_complexity Low_complexity 1 39 0 5 751 37 0 0 0 chr3R 21771154 21771191 -6133862 + AT_rich Low_complexity Low_complexity 1 37 0 5 751 24 0 0 0 chr3R 21776490 21776514 -6128539 + AT_rich Low_complexity Low_complexity 1 24 0 5 751 21 0 0 0 chr3R 21776745 21776766 -6128287 + AT_rich Low_complexity Low_complexity 1 21 0 5 751 23 33 0 0 chr3R 21777514 21777544 -6127509 + AT_rich Low_complexity Low_complexity 1 30 0 5 751 40 37 0 0 chr3R 21781683 21781737 -6123316 + AT_rich Low_complexity Low_complexity 1 54 0 5 751 288 169 39 0 chr3R 21781919 21781996 -6123057 - ROO_I LTR Pao -7525 731 652 5 751 21 36 0 0 chr3R 21783046 21783074 -6121979 + AT_rich Low_complexity Low_complexity 1 28 0 5 751 307 284 7 7 chr3R 21785865 21786007 -6119046 + (CAG)n Simple_repeat Simple_repeat 3 144 0 5 751 204 200 0 35 chr3R 21788490 21788547 -6116506 + A-rich Low_complexity Low_complexity 2 56 0 5 751 21 0 0 0 chr3R 21794415 21794436 -6110617 + AT_rich Low_complexity Low_complexity 1 21 0 5 751 24 53 0 0 chr3R 21795438 21795476 -6109577 + AT_rich Low_complexity Low_complexity 1 38 0 5 751 182 37 37 0 chr3R 21795894 21795921 -6109132 + (TA)n Simple_repeat Simple_repeat 1 28 0 5 751 236 188 0 0 chr3R 21796084 21796132 -6108921 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 751 36 53 0 0 chr3R 21796910 21796967 -6108086 + AT_rich Low_complexity Low_complexity 1 57 0 5 751 186 43 0 0 chr3R 21804865 21804888 -6100165 + (CCA)n Simple_repeat Simple_repeat 1 23 0 5 751 186 143 0 0 chr3R 21806393 21806428 -6098625 + (GGA)n Simple_repeat Simple_repeat 3 37 0 5 751 222 196 0 0 chr3R 21806587 21806633 -6098420 + GA-rich Low_complexity Low_complexity 2 47 0 5 751 192 125 0 0 chr3R 21810338 21810370 -6094683 + (GGAGAA)n Simple_repeat Simple_repeat 1 32 0 5 751 22 0 0 0 chr3R 21811810 21811832 -6093221 + AT_rich Low_complexity Low_complexity 1 22 0 5 751 204 97 0 0 chr3R 21817974 21818005 -6087048 + (CTA)n Simple_repeat Simple_repeat 3 33 0 5 751 204 97 0 0 chr3R 21820426 21820457 -6084596 + (TATG)n Simple_repeat Simple_repeat 2 32 0 5 751 27 49 0 0 chr3R 21820871 21820912 -6084141 + AT_rich Low_complexity Low_complexity 1 41 0 5 751 226 208 0 0 chr3R 21822122 21822170 -6082883 + (CTG)n Simple_repeat Simple_repeat 2 49 0 5 751 26 30 0 0 chr3R 21822880 21822913 -6082140 + AT_rich Low_complexity Low_complexity 1 33 0 5 751 42 0 0 0 chr3R 21824435 21824477 -6080576 + AT_rich Low_complexity Low_complexity 1 42 0 5 751 29 70 0 0 chr3R 21824516 21824573 -6080480 + AT_rich Low_complexity Low_complexity 1 57 0 5 751 22 0 0 0 chr3R 21826451 21826473 -6078580 + AT_rich Low_complexity Low_complexity 1 22 0 5 751 21 82 0 0 chr3R 21827624 21827673 -6077380 + AT_rich Low_complexity Low_complexity 1 49 0 5 751 216 111 0 0 chr3R 21832321 21832357 -6072696 + (TTCGG)n Simple_repeat Simple_repeat 5 40 0 5 751 21 57 0 0 chr3R 21833418 21833453 -6071600 + AT_rich Low_complexity Low_complexity 1 35 0 5 751 30 45 0 0 chr3R 21840097 21840141 -6064912 + AT_rich Low_complexity Low_complexity 1 44 0 5 751 297 200 27 0 chr3R 21842589 21842664 -6062389 - ROO_I LTR Pao -7527 729 653 5 751 222 37 0 0 chr3R 21842862 21842889 -6062164 + (CTG)n Simple_repeat Simple_repeat 1 27 0 5 751 30 59 0 0 chr3R 21845095 21845146 -6059907 + AT_rich Low_complexity Low_complexity 1 51 0 5 751 246 105 0 0 chr3R 21848167 21848205 -6056848 + (CAG)n Simple_repeat Simple_repeat 1 38 0 5 751 21 36 0 0 chr3R 21848760 21848788 -6056265 + AT_rich Low_complexity Low_complexity 1 28 0 5 751 37 23 0 0 chr3R 21848880 21848924 -6056129 + AT_rich Low_complexity Low_complexity 1 44 0 5 751 21 57 0 0 chr3R 21851748 21851783 -6053270 + AT_rich Low_complexity Low_complexity 1 35 0 5 751 27 0 0 0 chr3R 21852571 21852598 -6052455 + AT_rich Low_complexity Low_complexity 1 27 0 5 751 305 189 0 10 chr3R 21856570 21856666 -6048387 + (ACTG)n Simple_repeat Simple_repeat 4 98 0 5 751 276 111 0 0 chr3R 21858030 21858075 -6046978 + (CAG)n Simple_repeat Simple_repeat 3 47 0 5 751 204 378 0 0 chr3R 21859316 21859464 -6045589 + (CAA)n Simple_repeat Simple_repeat 2 149 0 5 751 225 119 0 0 chr3R 21860289 21860331 -6044722 + (T)n Simple_repeat Simple_repeat 1 42 0 5 751 201 176 54 0 chr3R 21866930 21867004 -6038049 + (TA)n Simple_repeat Simple_repeat 2 79 0 5 751 23 0 0 0 chr3R 21868809 21868832 -6036221 + AT_rich Low_complexity Low_complexity 1 23 0 5 751 22 56 0 0 chr3R 21870998 21871034 -6034019 + AT_rich Low_complexity Low_complexity 1 36 0 5 751 207 224 20 0 chr3R 21874404 21874453 -6030600 + (CAA)n Simple_repeat Simple_repeat 2 51 0 5 751 216 0 0 0 chr3R 21875073 21875097 -6029956 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 751 24 32 0 0 chr3R 21875442 21875473 -6029580 + AT_rich Low_complexity Low_complexity 1 31 0 5 751 32 75 0 0 chr3R 21875524 21875591 -6029462 + AT_rich Low_complexity Low_complexity 1 67 0 5 751 238 303 0 0 chr3R 21879312 21879401 -6025652 + (TGG)n Simple_repeat Simple_repeat 1 89 0 5 751 183 80 0 0 chr3R 21879785 21879810 -6025243 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 751 32 0 0 0 chr3R 21881275 21881307 -6023746 + AT_rich Low_complexity Low_complexity 1 32 0 5 751 21 0 0 0 chr3R 21881359 21881380 -6023673 + AT_rich Low_complexity Low_complexity 1 21 0 5 751 243 152 0 0 chr3R 21888429 21888475 -6016578 + (CTG)n Simple_repeat Simple_repeat 2 47 0 5 751 21 36 0 0 chr3R 21888786 21888814 -6016239 + AT_rich Low_complexity Low_complexity 1 28 0 5 752 223 28 0 53 chr3R 21889684 21889722 -6015331 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 752 21 0 0 0 chr3R 21891916 21891937 -6013116 + AT_rich Low_complexity Low_complexity 1 21 0 5 752 22 35 0 0 chr3R 21892702 21892731 -6012322 + AT_rich Low_complexity Low_complexity 1 29 0 5 752 258 125 0 0 chr3R 21893645 21893693 -6011360 + (T)n Simple_repeat Simple_repeat 1 48 0 5 752 225 178 0 0 chr3R 21894641 21894686 -6010367 + (TTG)n Simple_repeat Simple_repeat 2 46 0 5 752 188 35 35 0 chr3R 21897870 21897899 -6007154 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 752 200 194 0 0 chr3R 21899826 21899862 -6005191 + (TTCGGG)n Simple_repeat Simple_repeat 4 39 0 5 752 195 42 0 0 chr3R 21900002 21900026 -6005027 + (CTG)n Simple_repeat Simple_repeat 3 26 0 5 752 24 32 0 0 chr3R 21902398 21902429 -6002624 + AT_rich Low_complexity Low_complexity 1 31 0 5 752 183 80 0 0 chr3R 21904135 21904160 -6000893 + (ATGGTG)n Simple_repeat Simple_repeat 1 25 0 5 752 21 0 0 0 chr3R 21904798 21904819 -6000234 + AT_rich Low_complexity Low_complexity 1 21 0 5 752 23 54 0 0 chr3R 21904902 21904939 -6000114 + AT_rich Low_complexity Low_complexity 1 37 0 5 752 186 133 0 0 chr3R 21908541 21908571 -5996482 + (CTG)n Simple_repeat Simple_repeat 3 32 0 5 752 201 121 0 0 chr3R 21909327 21909360 -5995693 + (TA)n Simple_repeat Simple_repeat 1 33 0 5 752 269 177 37 25 chr3R 21909570 21909651 -5995402 - ROO_I LTR Pao -7539 717 636 5 752 247 229 0 0 chr3R 21911269 21911330 -5993723 + ROO_I LTR Pao 645 705 -7551 5 752 225 221 88 38 chr3R 21911278 21911358 -5993695 + DOC3_DM LINE Jockey 529 612 -4128 5 752 327 136 0 0 chr3R 21911491 21911550 -5993503 + (CAG)n Simple_repeat Simple_repeat 3 61 0 5 752 204 260 0 20 chr3R 21912410 21912461 -5992592 + (CAA)n Simple_repeat Simple_repeat 1 50 0 5 752 219 161 0 0 chr3R 21912948 21913004 -5992049 + A-rich Low_complexity Low_complexity 1 56 0 5 752 26 64 0 0 chr3R 21914456 21914503 -5990550 + AT_rich Low_complexity Low_complexity 1 47 0 5 752 34 0 0 0 chr3R 21916166 21916200 -5988853 + AT_rich Low_complexity Low_complexity 1 34 0 5 752 216 86 0 0 chr3R 21919240 21919275 -5985778 + (GTCTG)n Simple_repeat Simple_repeat 5 39 0 5 752 228 136 12 47 chr3R 21921930 21922015 -5983038 - ROO_I LTR Pao -7532 724 643 5 752 345 152 0 83 chr3R 21922081 21922189 -5982864 - ROO_I LTR Pao -7524 732 634 5 752 44 35 0 0 chr3R 21924600 21924658 -5980395 + AT_rich Low_complexity Low_complexity 1 58 0 5 752 28 0 0 0 chr3R 21924692 21924720 -5980333 + AT_rich Low_complexity Low_complexity 1 28 0 5 752 21 0 0 0 chr3R 21926193 21926214 -5978839 + AT_rich Low_complexity Low_complexity 1 21 0 5 752 216 158 0 0 chr3R 21927951 21927989 -5977064 + (CGA)n Simple_repeat Simple_repeat 3 40 0 5 752 34 42 0 0 chr3R 21929594 21929642 -5975411 + AT_rich Low_complexity Low_complexity 1 48 0 5 752 225 219 31 0 chr3R 21930505 21930569 -5974484 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 752 35 24 0 0 chr3R 21932467 21932509 -5972544 + AT_rich Low_complexity Low_complexity 1 42 0 5 752 249 128 0 0 chr3R 21932765 21932812 -5972241 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 752 25 0 0 0 chr3R 21933571 21933596 -5971457 + AT_rich Low_complexity Low_complexity 1 25 0 5 752 3799 5 0 0 chr3R 21934602 21935019 -5970034 + TIRANT_LTR LTR Gypsy 1 417 0 5 752 71179 0 0 0 chr3R 21935019 21942711 -5962342 + TIRANT_I LTR Gypsy 1 7692 0 5 752 3799 5 0 0 chr3R 21942711 21943128 -5961925 + TIRANT_LTR LTR Gypsy 1 417 0 5 752 180 0 0 0 chr3R 21943172 21943192 -5961861 + (A)n Simple_repeat Simple_repeat 1 20 0 5 752 36 70 0 0 chr3R 21943637 21943708 -5961345 + AT_rich Low_complexity Low_complexity 1 71 0 5 752 212 136 0 43 chr3R 21944650 21944696 -5960357 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 752 21 36 0 0 chr3R 21947921 21947949 -5957104 + AT_rich Low_complexity Low_complexity 1 28 0 5 752 315 0 0 0 chr3R 21948223 21948258 -5956795 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 5 752 24 0 0 0 chr3R 21948722 21948746 -5956307 + AT_rich Low_complexity Low_complexity 1 24 0 5 752 23 33 0 0 chr3R 21953523 21953553 -5951500 + AT_rich Low_complexity Low_complexity 1 30 0 5 752 28 48 0 0 chr3R 21955694 21955736 -5949317 + AT_rich Low_complexity Low_complexity 1 42 0 5 752 21 0 0 0 chr3R 21957726 21957747 -5947306 + AT_rich Low_complexity Low_complexity 1 21 0 5 752 24 0 0 0 chr3R 21963075 21963099 -5941954 + AT_rich Low_complexity Low_complexity 1 24 0 5 752 23 33 0 0 chr3R 21973031 21973061 -5931992 + AT_rich Low_complexity Low_complexity 1 30 0 5 752 23 33 0 0 chr3R 21976088 21976118 -5928935 + AT_rich Low_complexity Low_complexity 1 30 0 5 752 303 213 0 0 chr3R 21977156 21977217 -5927836 - DNAREP1_DM LINE Penelope -533 61 1 5 752 24 32 0 0 chr3R 21982393 21982424 -5922629 + AT_rich Low_complexity Low_complexity 1 31 0 5 752 24 53 0 0 chr3R 21983572 21983610 -5921443 + AT_rich Low_complexity Low_complexity 1 38 0 5 752 25 31 0 0 chr3R 21986725 21986757 -5918296 + AT_rich Low_complexity Low_complexity 1 32 0 5 752 21 0 0 0 chr3R 21989096 21989117 -5915936 + AT_rich Low_complexity Low_complexity 1 21 0 5 752 24 0 0 0 chr3R 21996343 21996367 -5908686 + AT_rich Low_complexity Low_complexity 1 24 0 5 752 267 244 11 11 chr3R 22007657 22007748 -5897305 + CT-rich Low_complexity Low_complexity 1 91 0 5 752 23 0 0 0 chr3R 22017085 22017108 -5887945 + AT_rich Low_complexity Low_complexity 1 23 0 5 752 22 35 0 0 chr3R 22017804 22017833 -5887220 + AT_rich Low_complexity Low_complexity 1 29 0 5 753 25 0 0 0 chr3R 22026633 22026658 -5878395 + AT_rich Low_complexity Low_complexity 1 25 0 5 753 21 0 0 0 chr3R 22027368 22027389 -5877664 + AT_rich Low_complexity Low_complexity 1 21 0 5 753 39 0 0 0 chr3R 22030505 22030544 -5874509 + AT_rich Low_complexity Low_complexity 1 39 0 5 753 23 0 0 0 chr3R 22034632 22034655 -5870398 + AT_rich Low_complexity Low_complexity 1 23 0 5 753 31 44 0 0 chr3R 22036257 22036302 -5868751 + AT_rich Low_complexity Low_complexity 1 45 0 5 753 3614 5 7 7 chr3R 22041551 22041965 -5863088 - DM297_LTR LTR Gypsy 0 414 1 5 753 10205 8 0 0 chr3R 22041965 22043137 -5861916 - DM297_I LTR Gypsy 0 6167 4996 5 753 34763 7 0 0 chr3R 22043123 22047018 -5858035 - DM297_I LTR Gypsy -2272 3895 1 5 753 3605 5 7 7 chr3R 22047018 22047431 -5857622 - DM297_LTR LTR Gypsy 0 414 2 5 753 297 0 0 0 chr3R 22047431 22047464 -5857589 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 753 28 0 0 0 chr3R 22047558 22047586 -5857467 + AT_rich Low_complexity Low_complexity 1 28 0 5 753 22 35 0 0 chr3R 22048552 22048581 -5856472 + AT_rich Low_complexity Low_complexity 1 29 0 5 753 210 143 0 0 chr3R 22055692 22055727 -5849326 + (CAA)n Simple_repeat Simple_repeat 3 37 0 5 753 277 197 0 0 chr3R 22057887 22057958 -5847095 + ROO_I LTR Pao 662 732 -7524 5 753 183 139 0 0 chr3R 22059051 22059087 -5845966 + (A)n Simple_repeat Simple_repeat 1 36 0 5 753 24 0 0 0 chr3R 22065911 22065935 -5839118 + AT_rich Low_complexity Low_complexity 1 24 0 5 753 207 204 23 0 chr3R 22073670 22073714 -5831339 + (CAGC)n Simple_repeat Simple_repeat 2 46 0 5 753 30 27 0 0 chr3R 22073948 22073985 -5831068 + AT_rich Low_complexity Low_complexity 1 37 0 5 753 25 31 0 0 chr3R 22074094 22074126 -5830927 + AT_rich Low_complexity Low_complexity 1 32 0 5 753 22 0 0 0 chr3R 22076366 22076388 -5828665 + AT_rich Low_complexity Low_complexity 1 22 0 5 753 24 53 0 0 chr3R 22078614 22078652 -5826401 + AT_rich Low_complexity Low_complexity 1 38 0 5 753 23 33 0 0 chr3R 22080456 22080486 -5824567 + AT_rich Low_complexity Low_complexity 1 30 0 5 753 28 29 0 0 chr3R 22081587 22081622 -5823431 + AT_rich Low_complexity Low_complexity 1 35 0 5 753 200 229 0 20 chr3R 22087166 22087215 -5817838 + (CTG)n Simple_repeat Simple_repeat 3 50 0 5 753 195 139 0 0 chr3R 22089218 22089254 -5815799 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 753 44 35 0 0 chr3R 22094036 22094094 -5810959 + AT_rich Low_complexity Low_complexity 1 58 0 5 753 25 31 0 0 chr3R 22096091 22096123 -5808930 + AT_rich Low_complexity Low_complexity 1 32 0 5 753 223 284 0 0 chr3R 22096801 22096868 -5808185 + (TGGA)n Simple_repeat Simple_repeat 4 70 0 5 753 30 69 0 0 chr3R 22099117 22099175 -5805878 + AT_rich Low_complexity Low_complexity 1 58 0 5 753 23 86 0 0 chr3R 22102326 22102384 -5802669 + AT_rich Low_complexity Low_complexity 1 58 0 5 753 25 31 0 0 chr3R 22102738 22102770 -5802283 + AT_rich Low_complexity Low_complexity 1 32 0 5 753 30 0 0 0 chr3R 22103699 22103729 -5801324 + AT_rich Low_complexity Low_complexity 1 30 0 5 753 22 0 0 0 chr3R 22103759 22103781 -5801272 + AT_rich Low_complexity Low_complexity 1 22 0 5 753 218 333 0 0 chr3R 22103880 22103991 -5801062 + A-rich Low_complexity Low_complexity 1 111 0 5 753 230 306 0 23 chr3R 22106115 22106202 -5798851 + (CTCA)n Simple_repeat Simple_repeat 4 88 0 5 753 32 86 0 0 chr3R 22106907 22106988 -5798065 + AT_rich Low_complexity Low_complexity 1 81 0 5 753 228 229 0 0 chr3R 22115387 22115448 -5789605 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 753 195 42 0 0 chr3R 22115829 22115853 -5789200 + (CAGTT)n Simple_repeat Simple_repeat 2 25 0 5 753 26 0 0 0 chr3R 22116652 22116678 -5788375 + AT_rich Low_complexity Low_complexity 1 26 0 5 753 198 0 0 0 chr3R 22117632 22117654 -5787399 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 753 25 31 0 0 chr3R 22119149 22119181 -5785872 + AT_rich Low_complexity Low_complexity 1 32 0 5 753 25 51 0 0 chr3R 22126447 22126486 -5778567 + AT_rich Low_complexity Low_complexity 1 39 0 5 753 219 36 0 0 chr3R 22126787 22126815 -5778238 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 5 753 26 74 0 0 chr3R 22128884 22128938 -5776115 + AT_rich Low_complexity Low_complexity 1 54 0 5 753 21 0 0 0 chr3R 22129864 22129885 -5775168 + AT_rich Low_complexity Low_complexity 1 21 0 5 753 37 23 0 0 chr3R 22132041 22132085 -5772968 + AT_rich Low_complexity Low_complexity 1 44 0 5 753 24 77 0 0 chr3R 22143635 22143687 -5761366 + AT_rich Low_complexity Low_complexity 1 52 0 5 753 29 0 0 0 chr3R 22143723 22143752 -5761301 + AT_rich Low_complexity Low_complexity 1 29 0 5 753 21 0 0 0 chr3R 22147663 22147684 -5757369 + AT_rich Low_complexity Low_complexity 1 21 0 5 753 258 105 0 0 chr3R 22150374 22150412 -5754641 + (TCG)n Simple_repeat Simple_repeat 2 39 0 5 753 21 36 0 0 chr3R 22151069 22151097 -5753956 + AT_rich Low_complexity Low_complexity 1 28 0 5 754 220 70 23 23 chr3R 22155806 22155850 -5749203 + (CAAAC)n Simple_repeat Simple_repeat 2 45 0 5 754 22 0 0 0 chr3R 22155945 22155967 -5749086 + AT_rich Low_complexity Low_complexity 1 22 0 5 754 228 281 0 15 chr3R 22156551 22156616 -5748437 + (CAG)n Simple_repeat Simple_repeat 2 65 0 5 754 230 286 0 0 chr3R 22156955 22157025 -5748028 + ROO_I LTR Pao 658 727 -7529 5 754 21 0 0 0 chr3R 22159140 22159161 -5745892 + AT_rich Low_complexity Low_complexity 1 21 0 5 754 26 30 0 0 chr3R 22162827 22162860 -5742193 + AT_rich Low_complexity Low_complexity 1 33 0 5 754 22 70 0 0 chr3R 22164287 22164330 -5740723 + AT_rich Low_complexity Low_complexity 1 43 0 5 754 258 169 0 0 chr3R 22165318 22165383 -5739670 + (CAGT)n Simple_repeat Simple_repeat 4 68 0 5 754 237 108 0 0 chr3R 22169553 22169590 -5735463 + (GACTG)n Simple_repeat Simple_repeat 1 37 0 5 754 28 29 0 0 chr3R 22175069 22175104 -5729949 + AT_rich Low_complexity Low_complexity 1 35 0 5 754 278 310 0 0 chr3R 22179321 22179421 -5725632 + A-rich Low_complexity Low_complexity 1 100 0 5 754 28 48 0 0 chr3R 22181261 22181303 -5723750 + AT_rich Low_complexity Low_complexity 1 42 0 5 754 26 50 0 0 chr3R 22182757 22182797 -5722256 + AT_rich Low_complexity Low_complexity 1 40 0 5 754 246 81 0 0 chr3R 22198729 22198766 -5706287 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 754 28 0 0 0 chr3R 22199269 22199297 -5705756 + AT_rich Low_complexity Low_complexity 1 28 0 5 754 3736 0 0 2 chr3R 22202101 22202530 -5702523 - ROO_LTR LTR Pao 0 428 1 5 754 70307 1 1 0 chr3R 22202530 22210774 -5694279 - ROO_I LTR Pao 0 8256 1 5 754 3736 0 0 2 chr3R 22210774 22211203 -5693850 - ROO_LTR LTR Pao 0 428 1 5 754 26 30 0 0 chr3R 22213671 22213704 -5691349 + AT_rich Low_complexity Low_complexity 1 33 0 5 754 23 68 0 0 chr3R 22217687 22217731 -5687322 + AT_rich Low_complexity Low_complexity 1 44 0 5 754 21 0 0 0 chr3R 22219008 22219029 -5686024 + AT_rich Low_complexity Low_complexity 1 21 0 5 754 38 22 0 0 chr3R 22221130 22221175 -5683878 + AT_rich Low_complexity Low_complexity 1 45 0 5 754 22 0 0 0 chr3R 22221751 22221773 -5683280 + AT_rich Low_complexity Low_complexity 1 22 0 5 754 25 51 0 0 chr3R 22223222 22223261 -5681792 + AT_rich Low_complexity Low_complexity 1 39 0 5 754 201 132 0 0 chr3R 22225741 22225779 -5679274 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 754 208 121 0 0 chr3R 22226276 22226309 -5678744 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 5 754 25 0 0 0 chr3R 22227292 22227317 -5677736 + AT_rich Low_complexity Low_complexity 1 25 0 5 754 198 0 0 0 chr3R 22228690 22228712 -5676341 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 5 754 58 15 0 0 chr3R 22231667 22231732 -5673321 + AT_rich Low_complexity Low_complexity 1 65 0 5 754 236 202 25 25 chr3R 22233587 22233668 -5671385 + ROO_I LTR Pao 652 732 -7524 5 754 33 43 0 0 chr3R 22234763 22234810 -5670243 + AT_rich Low_complexity Low_complexity 1 47 0 5 754 26 50 0 0 chr3R 22235707 22235747 -5669306 + AT_rich Low_complexity Low_complexity 1 40 0 5 754 340 163 70 0 chr3R 22241478 22241564 -5663489 + ROO_I LTR Pao 641 732 -7524 5 754 21 82 0 0 chr3R 22241855 22241904 -5663149 + AT_rich Low_complexity Low_complexity 1 49 0 5 754 234 282 0 37 chr3R 22242427 22242508 -5662545 + (CTCA)n Simple_repeat Simple_repeat 1 78 0 5 754 213 94 0 0 chr3R 22244371 22244403 -5660650 + (TA)n Simple_repeat Simple_repeat 1 32 0 5 754 21 57 0 0 chr3R 22245233 22245268 -5659785 + AT_rich Low_complexity Low_complexity 1 35 0 5 754 35 92 0 0 chr3R 22246252 22246350 -5658703 + AT_rich Low_complexity Low_complexity 1 98 0 5 754 29 28 0 0 chr3R 22249368 22249404 -5655649 + AT_rich Low_complexity Low_complexity 1 36 0 5 754 24 32 0 0 chr3R 22252323 22252354 -5652699 + AT_rich Low_complexity Low_complexity 1 31 0 5 754 194 62 0 30 chr3R 22253086 22253119 -5651934 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 754 227 143 163 0 chr3R 22253925 22253974 -5651079 - Gypsy11_I LTR Gypsy -1652 1872 1816 5 754 28 29 0 0 chr3R 22254930 22254965 -5650088 + AT_rich Low_complexity Low_complexity 1 35 0 5 754 213 94 0 0 chr3R 22257742 22257774 -5647279 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 754 186 43 0 0 chr3R 22258189 22258212 -5646841 + (CAATA)n Simple_repeat Simple_repeat 3 25 0 5 754 204 158 0 0 chr3R 22258676 22258714 -5646339 + (CAT)n Simple_repeat Simple_repeat 1 38 0 5 754 22 0 0 0 chr3R 22258781 22258803 -5646250 + AT_rich Low_complexity Low_complexity 1 22 0 5 754 267 103 0 0 chr3R 22259552 22259591 -5645462 + (TTG)n Simple_repeat Simple_repeat 3 41 0 5 754 276 154 0 0 chr3R 22259772 22259824 -5645229 + (CCAA)n Simple_repeat Simple_repeat 1 52 0 5 754 23 33 0 0 chr3R 22260050 22260080 -5644973 + AT_rich Low_complexity Low_complexity 1 30 0 5 754 25 0 0 0 chr3R 22260398 22260423 -5644630 + AT_rich Low_complexity Low_complexity 1 25 0 5 754 244 232 14 14 chr3R 22260548 22260618 -5644435 + (CAA)n Simple_repeat Simple_repeat 2 71 0 5 754 35 54 0 0 chr3R 22261276 22261332 -5643721 + AT_rich Low_complexity Low_complexity 1 56 0 5 754 198 0 0 0 chr3R 22262617 22262639 -5642414 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 754 25 65 0 0 chr3R 22264627 22264673 -5640380 + AT_rich Low_complexity Low_complexity 1 46 0 5 754 22 0 0 0 chr3R 22265688 22265710 -5639343 + AT_rich Low_complexity Low_complexity 1 22 0 5 754 285 109 0 0 chr3R 22266243 22266289 -5638764 + (CGATA)n Simple_repeat Simple_repeat 4 49 0 5 754 219 114 0 0 chr3R 22266381 22266416 -5638637 + (CTGTG)n Simple_repeat Simple_repeat 5 39 0 5 754 31 0 0 0 chr3R 22268023 22268054 -5636999 + AT_rich Low_complexity Low_complexity 1 31 0 5 754 248 306 0 9 chr3R 22268642 22268754 -5636299 + A-rich Low_complexity Low_complexity 3 113 0 5 754 180 0 0 0 chr3R 22271224 22271244 -5633809 + (T)n Simple_repeat Simple_repeat 1 20 0 5 754 257 296 0 0 chr3R 22271594 22271665 -5633388 + (GCTG)n Simple_repeat Simple_repeat 3 73 0 5 754 207 261 0 0 chr3R 22280616 22280681 -5624372 + (CCA)n Simple_repeat Simple_repeat 2 66 0 5 755 180 163 0 0 chr3R 22282711 22282754 -5622299 + (CCA)n Simple_repeat Simple_repeat 2 44 0 5 755 234 0 0 0 chr3R 22282757 22282783 -5622270 + (TCC)n Simple_repeat Simple_repeat 2 27 0 5 755 221 146 0 20 chr3R 22287827 22287876 -5617177 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 755 21 36 0 0 chr3R 22291966 22291994 -5613059 + AT_rich Low_complexity Low_complexity 1 28 0 5 755 22 0 0 0 chr3R 22295705 22295727 -5609326 + AT_rich Low_complexity Low_complexity 1 22 0 5 755 207 0 0 0 chr3R 22297710 22297733 -5607320 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 755 26 30 0 0 chr3R 22297878 22297911 -5607142 + AT_rich Low_complexity Low_complexity 1 33 0 5 755 225 132 0 0 chr3R 22299115 22299153 -5605900 + (CTG)n Simple_repeat Simple_repeat 2 39 0 5 755 234 242 0 15 chr3R 22306452 22306519 -5598534 - ROO_I LTR Pao -7527 729 664 5 755 29 28 0 0 chr3R 22306921 22306957 -5598096 + AT_rich Low_complexity Low_complexity 1 36 0 5 755 203 158 0 0 chr3R 22307748 22307786 -5597267 + (GCTG)n Simple_repeat Simple_repeat 1 38 0 5 755 22 0 0 0 chr3R 22309526 22309548 -5595505 + AT_rich Low_complexity Low_complexity 1 22 0 5 755 21 0 0 0 chr3R 22310510 22310531 -5594522 + AT_rich Low_complexity Low_complexity 1 21 0 5 755 201 74 0 0 chr3R 22313871 22313898 -5591155 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 755 281 265 10 10 chr3R 22314116 22314219 -5590834 + (CCCCAG)n Simple_repeat Simple_repeat 3 105 0 5 755 22 70 0 0 chr3R 22317592 22317635 -5587418 + AT_rich Low_complexity Low_complexity 1 43 0 5 755 213 73 0 89 chr3R 22318474 22318519 -5586534 + (TAA)n Simple_repeat Simple_repeat 2 42 0 5 755 234 116 0 0 chr3R 22319460 22319503 -5585550 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 755 201 94 0 0 chr3R 22322082 22322114 -5582939 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 755 180 111 0 0 chr3R 22322889 22322916 -5582137 + (CAG)n Simple_repeat Simple_repeat 3 29 0 5 755 227 157 0 19 chr3R 22325625 22325677 -5579376 + (CAAAC)n Simple_repeat Simple_repeat 2 52 0 5 755 207 69 0 0 chr3R 22326040 22326069 -5578984 + (CAA)n Simple_repeat Simple_repeat 1 29 0 5 755 180 111 0 0 chr3R 22326539 22326566 -5578487 + (CAG)n Simple_repeat Simple_repeat 3 29 0 5 755 22 0 0 0 chr3R 22327956 22327978 -5577075 + AT_rich Low_complexity Low_complexity 1 22 0 5 755 225 204 0 0 chr3R 22328452 22328496 -5576557 + (CAT)n Simple_repeat Simple_repeat 1 44 0 5 755 200 231 0 0 chr3R 22333155 22333194 -5571859 + A-rich Low_complexity Low_complexity 6 44 0 5 755 200 260 0 0 chr3R 22334382 22334432 -5570621 + (CCGAG)n Simple_repeat Simple_repeat 3 52 0 5 755 186 128 0 0 chr3R 22335729 22335768 -5569285 + (GACTG)n Simple_repeat Simple_repeat 5 43 0 5 755 3749 2 0 0 chr3R 22336278 22336706 -5568347 + ROO_LTR LTR Pao 1 428 0 5 755 68959 0 14 0 chr3R 22336706 22344853 -5560200 + ROO_I LTR Pao 1 8256 0 5 755 3766 0 0 0 chr3R 22344853 22345281 -5559772 + ROO_LTR LTR Pao 1 428 0 5 755 244 314 0 0 chr3R 22348195 22348297 -5556756 + A-rich Low_complexity Low_complexity 1 102 0 5 755 21 36 0 0 chr3R 22348661 22348689 -5556364 + AT_rich Low_complexity Low_complexity 1 28 0 5 755 180 111 0 0 chr3R 22350302 22350329 -5554724 + (TAA)n Simple_repeat Simple_repeat 2 28 0 5 755 24 32 0 0 chr3R 22352342 22352373 -5552680 + AT_rich Low_complexity Low_complexity 1 31 0 5 755 261 163 0 0 chr3R 22354657 22354706 -5550347 + (CAA)n Simple_repeat Simple_repeat 1 49 0 5 755 212 184 20 0 chr3R 22354790 22354839 -5550214 + (CAA)n Simple_repeat Simple_repeat 1 50 0 5 755 213 159 0 0 chr3R 22358208 22358252 -5546801 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 755 237 159 0 0 chr3R 22359057 22359101 -5545952 + (TAA)n Simple_repeat Simple_repeat 3 46 0 5 755 185 94 31 0 chr3R 22360107 22360139 -5544914 + (CAG)n Simple_repeat Simple_repeat 2 34 0 5 755 201 211 0 0 chr3R 22360388 22360445 -5544608 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 755 194 83 56 0 chr3R 22361708 22361744 -5543309 + (TTATA)n Simple_repeat Simple_repeat 1 38 0 5 755 21 82 0 0 chr3R 22361801 22361850 -5543203 + AT_rich Low_complexity Low_complexity 1 49 0 5 755 192 158 0 0 chr3R 22362216 22362254 -5542799 + (CGTG)n Simple_repeat Simple_repeat 1 38 0 5 755 242 246 0 16 chr3R 22362452 22362514 -5542539 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 755 30 27 0 0 chr3R 22363052 22363089 -5541964 + AT_rich Low_complexity Low_complexity 1 37 0 5 755 203 245 0 0 chr3R 22368413 22368462 -5536591 + (TATG)n Simple_repeat Simple_repeat 4 52 0 5 755 180 0 0 0 chr3R 22368996 22369016 -5536037 + (TGAG)n Simple_repeat Simple_repeat 2 21 0 5 755 201 163 20 39 chr3R 22370067 22370118 -5534935 + GA-rich Low_complexity Low_complexity 2 51 0 5 755 21 36 0 0 chr3R 22372281 22372309 -5532744 + AT_rich Low_complexity Low_complexity 1 28 0 5 755 24 0 0 0 chr3R 22372359 22372383 -5532670 + AT_rich Low_complexity Low_complexity 1 24 0 5 755 185 132 26 0 chr3R 22373181 22373219 -5531834 + (CAA)n Simple_repeat Simple_repeat 1 39 0 5 755 24 32 0 0 chr3R 22378855 22378886 -5526167 + AT_rich Low_complexity Low_complexity 1 31 0 5 755 239 113 0 19 chr3R 22379294 22379348 -5525705 + (TTTCG)n Simple_repeat Simple_repeat 4 56 0 5 755 207 0 0 0 chr3R 22383166 22383189 -5521864 + (A)n Simple_repeat Simple_repeat 1 23 0 5 755 3442 2 0 2 chr3R 22384104 22384507 -5520546 + STALKER4_LTR LTR Gypsy 1 402 0 5 755 289 96 0 37 chr3R 22384511 22384565 -5520488 + STALKER4_I LTR Gypsy 1 52 -7350 5 755 36553 5 2 1 chr3R 22384739 22390952 -5514101 + STALKER4_I LTR Gypsy 242 6530 0 5 755 3672 2 0 2 chr3R 22390952 22391355 -5513698 + STALKER4_LTR LTR Gypsy 1 402 0 5 755 221 238 25 12 chr3R 22391867 22391948 -5513105 + (TA)n Simple_repeat Simple_repeat 2 83 0 5 755 186 103 0 0 chr3R 22393373 22393402 -5511651 + (CAG)n Simple_repeat Simple_repeat 1 29 0 5 755 189 0 0 0 chr3R 22395020 22395041 -5510012 + (TTCGG)n Simple_repeat Simple_repeat 2 22 0 5 755 21 71 0 0 chr3R 22397448 22397490 -5507563 + AT_rich Low_complexity Low_complexity 1 42 0 5 755 21 0 0 0 chr3R 22398673 22398694 -5506359 + AT_rich Low_complexity Low_complexity 1 21 0 5 755 200 176 0 0 chr3R 22400027 22400061 -5504992 + (CAG)n Simple_repeat Simple_repeat 1 34 0 5 755 21 57 0 0 chr3R 22402640 22402675 -5502378 + AT_rich Low_complexity Low_complexity 1 35 0 5 755 21 0 0 0 chr3R 22403178 22403199 -5501854 + AT_rich Low_complexity Low_complexity 1 21 0 5 755 195 162 0 0 chr3R 22407226 22407263 -5497790 + A-rich Low_complexity Low_complexity 1 37 0 5 755 249 167 0 0 chr3R 22407798 22407852 -5497201 + (TTG)n Simple_repeat Simple_repeat 2 55 0 5 755 226 233 13 27 chr3R 22408068 22408143 -5496910 + (TA)n Simple_repeat Simple_repeat 1 74 0 5 755 210 237 0 0 chr3R 22408259 22408318 -5496735 + T-rich Low_complexity Low_complexity 2 60 0 5 755 25 31 0 0 chr3R 22408553 22408585 -5496468 + AT_rich Low_complexity Low_complexity 1 32 0 5 755 183 42 0 0 chr3R 22413284 22413308 -5491745 + (CAGG)n Simple_repeat Simple_repeat 4 27 0 5 756 213 39 0 0 chr3R 22414410 22414436 -5490617 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 756 204 143 0 23 chr3R 22416601 22416644 -5488409 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 756 216 0 0 0 chr3R 22416827 22416851 -5488202 + (A)n Simple_repeat Simple_repeat 1 24 0 5 756 195 42 0 0 chr3R 22417444 22417468 -5487585 + (CACTC)n Simple_repeat Simple_repeat 2 25 0 5 756 22 35 0 0 chr3R 22419895 22419924 -5485129 + AT_rich Low_complexity Low_complexity 1 29 0 5 756 21 0 0 0 chr3R 22420005 22420026 -5485027 + AT_rich Low_complexity Low_complexity 1 21 0 5 756 24 32 0 0 chr3R 22421633 22421664 -5483389 + AT_rich Low_complexity Low_complexity 1 31 0 5 756 212 194 0 0 chr3R 22421749 22421785 -5483268 + (TTA)n Simple_repeat Simple_repeat 1 36 0 5 756 218 56 0 27 chr3R 22422617 22422654 -5482399 + (TAG)n Simple_repeat Simple_repeat 1 36 0 5 756 198 118 0 0 chr3R 22423553 22423587 -5481466 + (CAG)n Simple_repeat Simple_repeat 2 35 0 5 756 198 171 0 0 chr3R 22427085 22427126 -5477927 + (ATG)n Simple_repeat Simple_repeat 3 43 0 5 756 213 279 0 71 chr3R 22427820 22427905 -5477148 + (CGA)n Simple_repeat Simple_repeat 2 80 0 5 756 234 91 0 0 chr3R 22428520 22428553 -5476500 + (CAG)n Simple_repeat Simple_repeat 3 35 0 5 756 21 0 0 0 chr3R 22429504 22429525 -5475528 + AT_rich Low_complexity Low_complexity 1 21 0 5 756 208 243 13 26 chr3R 22430655 22430731 -5474322 + (CTG)n Simple_repeat Simple_repeat 1 75 0 5 756 222 91 0 0 chr3R 22431221 22431254 -5473799 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 756 26 0 0 0 chr3R 22434358 22434384 -5470669 + AT_rich Low_complexity Low_complexity 1 26 0 5 756 201 233 0 0 chr3R 22436033 22436076 -5468977 + (TCG)n Simple_repeat Simple_repeat 3 45 0 5 756 201 147 0 0 chr3R 22436659 22436693 -5468360 + (TTCGG)n Simple_repeat Simple_repeat 4 37 0 5 756 22 35 0 0 chr3R 22442064 22442093 -5462960 + AT_rich Low_complexity Low_complexity 1 29 0 5 756 21 0 0 0 chr3R 22443092 22443113 -5461940 + AT_rich Low_complexity Low_complexity 1 21 0 5 756 247 264 0 0 chr3R 22444024 22444077 -5460976 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 5 756 280 321 0 0 chr3R 22445077 22445183 -5459870 + (CGG)n Simple_repeat Simple_repeat 3 108 0 5 756 21 57 0 0 chr3R 22453463 22453498 -5451555 + AT_rich Low_complexity Low_complexity 1 35 0 5 756 25 31 0 0 chr3R 22454582 22454614 -5450439 + AT_rich Low_complexity Low_complexity 1 32 0 5 756 25 31 0 0 chr3R 22456543 22456575 -5448478 + AT_rich Low_complexity Low_complexity 1 32 0 5 756 200 259 0 66 chr3R 22457937 22458028 -5447025 + (GTCTG)n Simple_repeat Simple_repeat 5 89 0 5 756 2578 6 3 31 chr3R 22468505 22468828 -5436225 + LINEJ1_DM LINE Jockey 4707 5020 0 5 756 25 0 0 0 chr3R 22469068 22469093 -5435960 + AT_rich Low_complexity Low_complexity 1 25 0 5 756 217 228 0 17 chr3R 22469655 22469713 -5435340 + (CTG)n Simple_repeat Simple_repeat 3 59 0 5 756 251 228 0 0 chr3R 22473335 22473392 -5431661 + T-rich Low_complexity Low_complexity 1 57 0 5 756 219 88 0 0 chr3R 22474336 22474370 -5430683 + (T)n Simple_repeat Simple_repeat 1 34 0 5 756 28 61 0 0 chr3R 22476640 22476689 -5428364 + AT_rich Low_complexity Low_complexity 1 49 0 5 756 210 71 0 0 chr3R 22479151 22479179 -5425874 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 756 270 116 0 0 chr3R 22482985 22483028 -5422025 + (CAG)n Simple_repeat Simple_repeat 3 45 0 5 756 222 143 0 0 chr3R 22487929 22487978 -5417075 + (CTG)n Simple_repeat Simple_repeat 3 51 0 5 756 22 35 0 0 chr3R 22493135 22493164 -5411889 + AT_rich Low_complexity Low_complexity 1 29 0 5 756 23 0 0 0 chr3R 22495370 22495393 -5409660 + AT_rich Low_complexity Low_complexity 1 23 0 5 756 182 176 20 0 chr3R 22496877 22496928 -5408125 + A-rich Low_complexity Low_complexity 5 56 0 5 756 27 0 0 0 chr3R 22498464 22498491 -5406562 + AT_rich Low_complexity Low_complexity 1 27 0 5 756 237 119 0 0 chr3R 22504578 22504620 -5400433 + (GCCTG)n Simple_repeat Simple_repeat 3 44 0 5 756 23 33 0 0 chr3R 22508406 22508436 -5396617 + AT_rich Low_complexity Low_complexity 1 30 0 5 756 432 306 74 31 chr3R 22510956 22511212 -5393841 - SAR_DM Satellite Satellite -640 832 566 5 756 275 214 14 28 chr3R 22516516 22516588 -5388465 + (TTTCG)n Simple_repeat Simple_repeat 1 71 0 5 756 27 0 0 0 chr3R 22517748 22517775 -5387278 + AT_rich Low_complexity Low_complexity 1 27 0 5 756 211 217 16 16 chr3R 22518892 22518953 -5386100 + (CTG)n Simple_repeat Simple_repeat 3 63 0 5 756 23 0 0 0 chr3R 22523837 22523860 -5381193 + AT_rich Low_complexity Low_complexity 1 23 0 5 756 21 36 0 0 chr3R 22525350 22525378 -5379675 + AT_rich Low_complexity Low_complexity 1 28 0 5 756 218 213 0 0 chr3R 22537630 22537677 -5367376 + T-rich Low_complexity Low_complexity 1 47 0 5 756 24 85 0 0 chr3R 22543486 22543545 -5361508 + AT_rich Low_complexity Low_complexity 1 59 0 5 757 24 32 0 0 chr3R 22545527 22545558 -5359495 + AT_rich Low_complexity Low_complexity 1 31 0 5 757 245 98 0 24 chr3R 22546245 22546287 -5358766 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 757 21 36 0 0 chr3R 22555220 22555248 -5349805 + AT_rich Low_complexity Low_complexity 1 28 0 5 757 252 130 0 0 chr3R 22555899 22555945 -5349108 + (TGG)n Simple_repeat Simple_repeat 3 48 0 5 757 198 0 0 0 chr3R 22556914 22556936 -5348117 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 757 218 204 0 20 chr3R 22557161 22557211 -5347842 + (CCCA)n Simple_repeat Simple_repeat 1 49 0 5 757 216 0 0 0 chr3R 22558521 22558545 -5346508 + (CAA)n Simple_repeat Simple_repeat 3 26 0 5 757 208 306 0 39 chr3R 22558797 22558899 -5346154 + (TTG)n Simple_repeat Simple_repeat 1 98 0 5 757 204 97 0 0 chr3R 22563456 22563487 -5341566 + (A)n Simple_repeat Simple_repeat 1 31 0 5 757 227 204 0 0 chr3R 22567646 22567695 -5337358 + A-rich Low_complexity Low_complexity 1 49 0 5 757 207 196 0 0 chr3R 22568189 22568235 -5336818 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 757 207 0 0 0 chr3R 22570150 22570173 -5334880 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 757 186 171 0 0 chr3R 22570967 22571008 -5334045 + T-rich Low_complexity Low_complexity 1 41 0 5 757 224 146 35 35 chr3R 22574061 22574118 -5330935 + (CGGA)n Simple_repeat Simple_repeat 1 57 0 5 757 200 135 37 37 chr3R 22575725 22575779 -5329274 + (GTCTG)n Simple_repeat Simple_repeat 1 54 0 5 757 186 71 0 0 chr3R 22576321 22576349 -5328704 + (T)n Simple_repeat Simple_repeat 1 28 0 5 757 245 241 0 0 chr3R 22579564 22579618 -5325435 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 757 27 49 0 0 chr3R 22581204 22581245 -5323808 + AT_rich Low_complexity Low_complexity 1 41 0 5 757 23 0 0 0 chr3R 22582053 22582076 -5322977 + AT_rich Low_complexity Low_complexity 1 23 0 5 757 186 43 0 0 chr3R 22585572 22585595 -5319458 + (CATAC)n Simple_repeat Simple_repeat 1 23 0 5 757 229 133 22 0 chr3R 22586720 22586765 -5318288 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 757 186 71 0 0 chr3R 22590315 22590343 -5314710 + (CATCC)n Simple_repeat Simple_repeat 4 31 0 5 757 213 39 0 0 chr3R 22592819 22592845 -5312208 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 757 24 0 0 0 chr3R 22596296 22596320 -5308733 + AT_rich Low_complexity Low_complexity 1 24 0 5 757 200 261 0 0 chr3R 22598453 22598499 -5306554 + G-rich Low_complexity Low_complexity 3 48 0 5 757 258 32 0 0 chr3R 22601596 22601627 -5303426 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 757 28 0 0 0 chr3R 22604561 22604589 -5300464 + AT_rich Low_complexity Low_complexity 1 28 0 5 757 321 159 0 0 chr3R 22605162 22605225 -5299828 + (CAG)n Simple_repeat Simple_repeat 3 65 0 5 757 330 67 0 0 chr3R 22605281 22605326 -5299727 + (ATG)n Simple_repeat Simple_repeat 3 47 0 5 757 246 105 0 0 chr3R 22606584 22606622 -5298431 + (CAGC)n Simple_repeat Simple_repeat 4 41 0 5 757 22 0 0 0 chr3R 22611265 22611287 -5293766 + AT_rich Low_complexity Low_complexity 1 22 0 5 757 216 0 0 0 chr3R 22615918 22615942 -5289111 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 757 23 0 0 0 chr3R 22616947 22616970 -5288083 + AT_rich Low_complexity Low_complexity 1 23 0 5 757 24 0 0 0 chr3R 22618655 22618679 -5286374 + AT_rich Low_complexity Low_complexity 1 24 0 5 757 21 0 0 0 chr3R 22618858 22618879 -5286174 + AT_rich Low_complexity Low_complexity 1 21 0 5 757 243 203 0 0 chr3R 22619181 22619240 -5285813 + (CAG)n Simple_repeat Simple_repeat 3 61 0 5 757 198 0 0 0 chr3R 22622327 22622349 -5282704 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 757 21 0 0 0 chr3R 22624203 22624224 -5280829 + AT_rich Low_complexity Low_complexity 1 21 0 5 757 30 0 0 0 chr3R 22624483 22624513 -5280540 + AT_rich Low_complexity Low_complexity 1 30 0 5 757 35 0 0 0 chr3R 22624582 22624617 -5280436 + AT_rich Low_complexity Low_complexity 1 35 0 5 757 282 73 0 0 chr3R 22625509 22625550 -5279503 + (CTA)n Simple_repeat Simple_repeat 2 42 0 5 757 212 158 0 0 chr3R 22628415 22628453 -5276600 + (CAG)n Simple_repeat Simple_repeat 2 39 0 5 757 270 56 0 0 chr3R 22629341 22629377 -5275676 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 757 202 125 35 18 chr3R 22631540 22631597 -5273456 + A-rich Low_complexity Low_complexity 2 59 0 5 757 264 59 0 0 chr3R 22633155 22633189 -5271864 + (TA)n Simple_repeat Simple_repeat 1 34 0 5 757 4017 0 0 0 chr3R 22636329 22636757 -5268296 - ROO_LTR LTR Pao 0 428 1 5 757 189 132 0 0 chr3R 22637806 22637844 -5267209 + (CGA)n Simple_repeat Simple_repeat 2 39 0 5 757 24 0 0 0 chr3R 22639364 22639388 -5265665 + AT_rich Low_complexity Low_complexity 1 24 0 5 757 233 254 0 0 chr3R 22642504 22642563 -5262490 + (CCCA)n Simple_repeat Simple_repeat 4 62 0 5 757 312 120 0 0 chr3R 22643041 22643091 -5261962 + (TAA)n Simple_repeat Simple_repeat 3 52 0 5 757 204 40 0 0 chr3R 22644999 22645024 -5260029 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 757 201 121 0 0 chr3R 22650473 22650506 -5254547 + (CAGA)n Simple_repeat Simple_repeat 3 35 0 5 757 24 32 0 0 chr3R 22652517 22652548 -5252505 + AT_rich Low_complexity Low_complexity 1 31 0 5 757 21 0 0 0 chr3R 22654249 22654270 -5250783 + AT_rich Low_complexity Low_complexity 1 21 0 5 757 25 31 0 0 chr3R 22654289 22654321 -5250732 + AT_rich Low_complexity Low_complexity 1 32 0 5 757 22 0 0 0 chr3R 22654486 22654508 -5250545 + AT_rich Low_complexity Low_complexity 1 22 0 5 757 330 80 0 0 chr3R 22655321 22655371 -5249682 + (TTG)n Simple_repeat Simple_repeat 1 50 0 5 757 210 320 13 0 chr3R 22655546 22655621 -5249432 + (CATA)n Simple_repeat Simple_repeat 4 79 0 5 757 26 0 0 0 chr3R 22656358 22656384 -5248669 + AT_rich Low_complexity Low_complexity 1 26 0 5 757 186 43 0 0 chr3R 22658186 22658209 -5246844 + (CAT)n Simple_repeat Simple_repeat 1 23 0 5 757 225 0 0 0 chr3R 22660285 22660310 -5244743 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 757 182 59 88 0 chr3R 22662349 22662383 -5242670 + (AGCTG)n Simple_repeat Simple_repeat 1 37 0 5 757 27 0 0 0 chr3R 22668101 22668128 -5236925 + AT_rich Low_complexity Low_complexity 1 27 0 5 757 26 0 0 0 chr3R 22668988 22669014 -5236039 + AT_rich Low_complexity Low_complexity 1 26 0 5 758 26 0 0 0 chr3R 22678170 22678196 -5226857 + AT_rich Low_complexity Low_complexity 1 26 0 5 758 21 0 0 0 chr3R 22679079 22679100 -5225953 + AT_rich Low_complexity Low_complexity 1 21 0 5 758 180 0 0 0 chr3R 22683030 22683050 -5222003 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 758 25 31 0 0 chr3R 22694594 22694626 -5210427 + AT_rich Low_complexity Low_complexity 1 32 0 5 758 234 0 0 0 chr3R 22694645 22694671 -5210382 + (A)n Simple_repeat Simple_repeat 1 26 0 5 758 24 32 0 0 chr3R 22698305 22698336 -5206717 + AT_rich Low_complexity Low_complexity 1 31 0 5 758 207 186 0 0 chr3R 22702649 22702692 -5202361 + (TTG)n Simple_repeat Simple_repeat 1 43 0 5 758 252 0 0 0 chr3R 22702947 22702975 -5202078 + (A)n Simple_repeat Simple_repeat 1 28 0 5 758 200 209 0 0 chr3R 22703996 22704039 -5201014 + (CAT)n Simple_repeat Simple_repeat 1 43 0 5 758 225 0 0 0 chr3R 22705003 22705028 -5200025 + (CAG)n Simple_repeat Simple_repeat 1 25 0 5 758 202 224 0 0 chr3R 22706433 22706482 -5198571 + (ATG)n Simple_repeat Simple_repeat 1 49 0 5 758 22 0 0 0 chr3R 22707046 22707068 -5197985 + AT_rich Low_complexity Low_complexity 1 22 0 5 758 207 100 0 0 chr3R 22707479 22707509 -5197544 + (CGAAT)n Simple_repeat Simple_repeat 4 33 0 5 758 25 65 0 0 chr3R 22709950 22709996 -5195057 + AT_rich Low_complexity Low_complexity 1 46 0 5 758 24 0 0 0 chr3R 22712154 22712178 -5192875 + AT_rich Low_complexity Low_complexity 1 24 0 5 758 300 111 0 0 chr3R 22715799 22715853 -5189200 + (CAGT)n Simple_repeat Simple_repeat 3 56 0 5 758 244 208 0 0 chr3R 22719396 22719444 -5185609 + (CAGT)n Simple_repeat Simple_repeat 3 50 0 5 758 228 67 0 0 chr3R 22722061 22722091 -5182962 + (TATG)n Simple_repeat Simple_repeat 3 32 0 5 758 21 0 0 0 chr3R 22722799 22722820 -5182233 + AT_rich Low_complexity Low_complexity 1 21 0 5 758 29 0 0 0 chr3R 22723142 22723171 -5181882 + AT_rich Low_complexity Low_complexity 1 29 0 5 758 330 87 0 0 chr3R 22723392 22723438 -5181615 + (CAA)n Simple_repeat Simple_repeat 3 48 0 5 758 30 45 0 0 chr3R 22724749 22724793 -5180260 + AT_rich Low_complexity Low_complexity 1 44 0 5 758 26 0 0 0 chr3R 22725898 22725924 -5179129 + AT_rich Low_complexity Low_complexity 1 26 0 5 758 203 156 0 0 chr3R 22730463 22730495 -5174558 + (CATATA)n Simple_repeat Simple_repeat 1 32 0 5 758 204 163 0 23 chr3R 22731687 22731731 -5173322 + (CAAAT)n Simple_repeat Simple_repeat 1 43 0 5 758 225 191 0 0 chr3R 22740191 22740238 -5164815 + A-rich Low_complexity Low_complexity 1 47 0 5 758 26 0 0 0 chr3R 22741208 22741234 -5163819 + AT_rich Low_complexity Low_complexity 1 26 0 5 758 34 42 0 0 chr3R 22742855 22742903 -5162150 + AT_rich Low_complexity Low_complexity 1 48 0 5 758 29 0 0 0 chr3R 22754940 22754969 -5150084 + AT_rich Low_complexity Low_complexity 1 29 0 5 758 23 54 0 0 chr3R 22755588 22755625 -5149428 + AT_rich Low_complexity Low_complexity 1 37 0 5 758 21 36 0 0 chr3R 22756543 22756571 -5148482 + AT_rich Low_complexity Low_complexity 1 28 0 5 758 26 30 0 0 chr3R 22760085 22760118 -5144935 + AT_rich Low_complexity Low_complexity 1 33 0 5 758 210 37 0 0 chr3R 22763112 22763139 -5141914 + (TCC)n Simple_repeat Simple_repeat 3 29 0 5 758 24 32 0 0 chr3R 22773197 22773228 -5131825 + AT_rich Low_complexity Low_complexity 1 31 0 5 758 25 0 0 0 chr3R 22775698 22775723 -5129330 + AT_rich Low_complexity Low_complexity 1 25 0 5 758 26 50 0 0 chr3R 22775904 22775944 -5129109 + AT_rich Low_complexity Low_complexity 1 40 0 5 758 21 0 0 0 chr3R 22777254 22777275 -5127778 + AT_rich Low_complexity Low_complexity 1 21 0 5 758 213 164 66 0 chr3R 22779901 22779962 -5125091 + (TA)n Simple_repeat Simple_repeat 1 65 0 5 758 200 250 33 0 chr3R 22780117 22780177 -5124876 + (CAGAGA)n Simple_repeat Simple_repeat 2 63 0 5 758 24 0 0 0 chr3R 22786715 22786739 -5118314 + AT_rich Low_complexity Low_complexity 1 24 0 5 758 201 121 0 0 chr3R 22788519 22788552 -5116501 + (TATATG)n Simple_repeat Simple_repeat 1 33 0 5 758 206 164 0 18 chr3R 22793077 22793133 -5111920 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 758 21 0 0 0 chr3R 22803290 22803311 -5101742 + AT_rich Low_complexity Low_complexity 1 21 0 5 758 258 153 40 40 chr3R 22805989 22806064 -5098989 + A-rich Low_complexity Low_complexity 4 78 0 5 759 192 40 0 0 chr3R 22806595 22806620 -5098433 + (TATG)n Simple_repeat Simple_repeat 4 28 0 5 759 23 33 0 0 chr3R 22807480 22807510 -5097543 + AT_rich Low_complexity Low_complexity 1 30 0 5 759 35 63 0 0 chr3R 22809618 22809681 -5095372 + AT_rich Low_complexity Low_complexity 1 63 0 5 759 25 31 0 0 chr3R 22810172 22810204 -5094849 + AT_rich Low_complexity Low_complexity 1 32 0 5 759 21 36 0 0 chr3R 22813651 22813679 -5091374 + AT_rich Low_complexity Low_complexity 1 28 0 5 759 22 35 0 0 chr3R 22815635 22815664 -5089389 + AT_rich Low_complexity Low_complexity 1 29 0 5 759 362 247 34 40 chr3R 22818526 22818703 -5086350 + XDMR_DM Unknown Unknown 176 351 -9 5 759 382 250 40 29 chr3R 22818604 22818777 -5086276 - SAR_DM Satellite Satellite -679 793 619 5 759 23 33 0 0 chr3R 22822144 22822174 -5082879 + AT_rich Low_complexity Low_complexity 1 30 0 5 759 3977 5 0 0 chr3R 22833181 22833609 -5071444 + ROO_LTR LTR Pao 1 428 0 5 759 74447 1 4 0 chr3R 22833609 22841830 -5063223 + ROO_I LTR Pao 1 8256 0 5 759 3977 5 0 0 chr3R 22841830 22842258 -5062795 + ROO_LTR LTR Pao 1 428 0 5 759 21 57 0 0 chr3R 22847348 22847383 -5057670 + AT_rich Low_complexity Low_complexity 1 35 0 5 759 23 0 0 0 chr3R 22853439 22853462 -5051591 + AT_rich Low_complexity Low_complexity 1 23 0 5 759 23 33 0 0 chr3R 22858251 22858281 -5046772 + AT_rich Low_complexity Low_complexity 1 30 0 5 759 229 271 0 0 chr3R 22859558 22859606 -5045447 + (TCG)n Simple_repeat Simple_repeat 2 49 0 5 759 21 57 0 0 chr3R 22861907 22861942 -5043111 + AT_rich Low_complexity Low_complexity 1 35 0 5 759 37 0 0 0 chr3R 22866586 22866623 -5038430 + AT_rich Low_complexity Low_complexity 1 37 0 5 759 240 120 65 26 chr3R 22872113 22872190 -5032863 + XDMR_DM Unknown Unknown 274 353 -7 5 759 231 210 72 98 chr3R 22872132 22872285 -5032768 - SAR_DM Satellite Satellite -720 752 604 5 759 23 0 0 0 chr3R 22872769 22872792 -5032261 + AT_rich Low_complexity Low_complexity 1 23 0 5 759 210 222 27 14 chr3R 22874069 22874142 -5030911 + (CTCA)n Simple_repeat Simple_repeat 1 74 0 5 759 231 36 0 0 chr3R 22874528 22874556 -5030497 + (GA)n Simple_repeat Simple_repeat 2 29 0 5 759 308 238 0 37 chr3R 22875311 22875556 -5029497 + (CGG)n Simple_repeat Simple_repeat 1 235 0 5 759 180 0 0 0 chr3R 22876584 22876604 -5028449 + (ATG)n Simple_repeat Simple_repeat 2 21 0 5 759 26 50 0 0 chr3R 22877524 22877564 -5027489 + AT_rich Low_complexity Low_complexity 1 40 0 5 759 25 0 0 0 chr3R 22879813 22879838 -5025215 + AT_rich Low_complexity Low_complexity 1 25 0 5 759 29 28 0 0 chr3R 22885923 22885959 -5019094 + AT_rich Low_complexity Low_complexity 1 36 0 5 759 192 70 22 44 chr3R 22890792 22890837 -5014216 + (TTTTTG)n Simple_repeat Simple_repeat 5 48 0 5 759 21 0 0 0 chr3R 22895229 22895250 -5009803 + AT_rich Low_complexity Low_complexity 1 21 0 5 759 22 0 0 0 chr3R 22900993 22901015 -5004038 + AT_rich Low_complexity Low_complexity 1 22 0 5 759 27 0 0 0 chr3R 22901841 22901868 -5003185 + AT_rich Low_complexity Low_complexity 1 27 0 5 759 180 0 0 0 chr3R 22908175 22908195 -4996858 + (TC)n Simple_repeat Simple_repeat 2 21 0 5 759 205 250 0 0 chr3R 22909564 22909612 -4995441 + (CTGGGG)n Simple_repeat Simple_repeat 1 48 0 5 759 27 0 0 0 chr3R 22918724 22918751 -4986302 + AT_rich Low_complexity Low_complexity 1 27 0 5 759 22 56 0 0 chr3R 22925230 22925266 -4979787 + AT_rich Low_complexity Low_complexity 1 36 0 5 759 23 0 0 0 chr3R 22926205 22926228 -4978825 + AT_rich Low_complexity Low_complexity 1 23 0 5 759 24 67 0 0 chr3R 22926849 22926894 -4978159 + AT_rich Low_complexity Low_complexity 1 45 0 5 759 26 0 0 0 chr3R 22932941 22932967 -4972086 + AT_rich Low_complexity Low_complexity 1 26 0 5 760 21 36 0 0 chr3R 22938055 22938083 -4966970 + AT_rich Low_complexity Low_complexity 1 28 0 5 760 263 307 0 0 chr3R 22941632 22941720 -4963333 + CT-rich Low_complexity Low_complexity 2 89 0 5 760 222 37 0 0 chr3R 22951060 22951087 -4953966 + (TTTAG)n Simple_repeat Simple_repeat 4 30 0 5 760 198 0 0 0 chr3R 22951821 22951843 -4953210 + (CTG)n Simple_repeat Simple_repeat 2 23 0 5 760 222 207 0 0 chr3R 22952602 22952660 -4952393 + (ATGGTG)n Simple_repeat Simple_repeat 4 61 0 5 760 226 333 0 0 chr3R 22953003 22953090 -4951963 + (TCG)n Simple_repeat Simple_repeat 1 87 0 5 760 192 97 0 0 chr3R 22953341 22953372 -4951681 + (TGG)n Simple_repeat Simple_repeat 2 32 0 5 760 206 321 0 0 chr3R 22953372 22953425 -4951628 + (CTG)n Simple_repeat Simple_repeat 2 54 0 5 760 243 0 0 0 chr3R 22959968 22959995 -4945058 + (CAT)n Simple_repeat Simple_repeat 3 29 0 5 760 219 36 0 0 chr3R 22961097 22961125 -4943928 + (GAGTG)n Simple_repeat Simple_repeat 5 32 0 5 760 252 86 0 0 chr3R 22961307 22961342 -4943711 + (CGG)n Simple_repeat Simple_repeat 2 36 0 5 760 231 88 0 0 chr3R 22963661 22963695 -4941358 + (TTG)n Simple_repeat Simple_repeat 1 34 0 5 760 234 62 0 0 chr3R 22965326 22965358 -4939695 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 760 221 57 29 0 chr3R 22966152 22966187 -4938866 + (GAAAA)n Simple_repeat Simple_repeat 2 37 0 5 760 61595 2 3 14 chr3R 22966291 22973844 -4931209 + DM412 LTR Gypsy 1 6897 0 5 760 211 149 43 0 chr3R 22976194 22976241 -4928812 + CT-rich Low_complexity Low_complexity 1 49 0 5 760 183 42 0 0 chr3R 22976282 22976306 -4928747 + (CTCA)n Simple_repeat Simple_repeat 3 26 0 5 760 21 45 0 22 chr3R 22977013 22977036 -4928017 + AT_rich Low_complexity Low_complexity 1 23 0 5 760 430 58 14 28 chr3R 22977036 22977107 -4927946 + (TAA)n Simple_repeat Simple_repeat 1 70 0 5 760 21 45 0 22 chr3R 22977107 22977129 -4927924 + AT_rich Low_complexity Low_complexity 1 22 0 5 760 22 88 0 0 chr3R 22979464 22979521 -4925532 + AT_rich Low_complexity Low_complexity 1 57 0 5 760 240 204 0 0 chr3R 22982954 22983008 -4922045 + (CCAA)n Simple_repeat Simple_repeat 2 55 0 5 760 26 0 0 0 chr3R 22997863 22997889 -4907164 + AT_rich Low_complexity Low_complexity 1 26 0 5 760 203 167 0 0 chr3R 22998666 22998702 -4906351 + (TTGG)n Simple_repeat Simple_repeat 3 38 0 5 760 27 29 0 0 chr3R 23000237 23000271 -4904782 + AT_rich Low_complexity Low_complexity 1 34 0 5 760 22 0 0 0 chr3R 23001235 23001257 -4903796 + AT_rich Low_complexity Low_complexity 1 22 0 5 760 204 97 0 0 chr3R 23001840 23001871 -4903182 + (CAGTT)n Simple_repeat Simple_repeat 5 35 0 5 760 213 196 0 0 chr3R 23002210 23002261 -4902792 + (TCG)n Simple_repeat Simple_repeat 1 51 0 5 760 22 0 0 0 chr3R 23003427 23003449 -4901604 + AT_rich Low_complexity Low_complexity 1 22 0 5 760 309 51 0 0 chr3R 23004328 23004367 -4900686 + (CATTT)n Simple_repeat Simple_repeat 3 41 0 5 760 222 361 0 0 chr3R 23006796 23006904 -4898149 + (CAG)n Simple_repeat Simple_repeat 3 110 0 5 760 225 222 44 44 chr3R 23007664 23007777 -4897276 - XDMR_DM Unknown Unknown -10 350 238 5 760 26 98 0 0 chr3R 23007966 23008048 -4897005 + AT_rich Low_complexity Low_complexity 1 82 0 5 760 186 71 0 0 chr3R 23009709 23009737 -4895316 + (A)n Simple_repeat Simple_repeat 1 28 0 5 760 204 204 18 18 chr3R 23009744 23009799 -4895254 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 5 760 213 94 0 0 chr3R 23011529 23011561 -4893492 + (ACTG)n Simple_repeat Simple_repeat 1 32 0 5 760 22 0 0 0 chr3R 23017737 23017759 -4887294 + AT_rich Low_complexity Low_complexity 1 22 0 5 760 213 180 0 0 chr3R 23018092 23018142 -4886911 + (CTG)n Simple_repeat Simple_repeat 3 52 0 5 760 233 212 0 0 chr3R 23018419 23018485 -4886568 - ROO_I LTR Pao -7551 705 640 5 760 207 0 0 0 chr3R 23019846 23019869 -4885184 + (TGG)n Simple_repeat Simple_repeat 1 23 0 5 760 215 264 0 0 chr3R 23020676 23020729 -4884324 + (CAG)n Simple_repeat Simple_repeat 1 53 0 5 760 225 209 0 0 chr3R 23020916 23020959 -4884094 + A-rich Low_complexity Low_complexity 1 43 0 5 760 186 128 0 0 chr3R 23024776 23024815 -4880238 + (A)n Simple_repeat Simple_repeat 1 39 0 5 760 189 94 0 0 chr3R 23024992 23025024 -4880029 + (TTTCG)n Simple_repeat Simple_repeat 4 35 0 5 760 21 0 0 0 chr3R 23026649 23026670 -4878383 + AT_rich Low_complexity Low_complexity 1 21 0 5 760 211 220 0 0 chr3R 23029772 23029822 -4875231 + A-rich Low_complexity Low_complexity 1 50 0 5 760 24 53 0 0 chr3R 23030833 23030871 -4874182 + AT_rich Low_complexity Low_complexity 1 38 0 5 760 27 73 0 0 chr3R 23032618 23032673 -4872380 + AT_rich Low_complexity Low_complexity 1 55 0 5 760 186 143 0 0 chr3R 23037516 23037551 -4867502 + (T)n Simple_repeat Simple_repeat 1 35 0 5 760 21 36 0 0 chr3R 23038555 23038583 -4866470 + AT_rich Low_complexity Low_complexity 1 28 0 5 760 21 36 0 0 chr3R 23039625 23039653 -4865400 + AT_rich Low_complexity Low_complexity 1 28 0 5 760 210 37 0 0 chr3R 23040414 23040441 -4864612 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 760 204 67 0 0 chr3R 23041015 23041045 -4864008 + (A)n Simple_repeat Simple_repeat 1 30 0 5 760 32 26 0 0 chr3R 23041941 23041980 -4863073 + AT_rich Low_complexity Low_complexity 1 39 0 5 760 23 0 0 0 chr3R 23046527 23046550 -4858503 + AT_rich Low_complexity Low_complexity 1 23 0 5 760 216 0 0 0 chr3R 23048245 23048269 -4856784 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 760 211 224 0 20 chr3R 23052716 23052766 -4852287 + (TGAA)n Simple_repeat Simple_repeat 3 51 0 5 760 23 0 0 0 chr3R 23054380 23054403 -4850650 + AT_rich Low_complexity Low_complexity 1 23 0 5 760 267 348 6 11 chr3R 23063076 23063256 -4841797 + (CTG)n Simple_repeat Simple_repeat 1 179 0 5 760 231 78 59 0 chr3R 23064101 23064152 -4840901 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 761 21 0 0 0 chr3R 23070871 23070892 -4834161 + AT_rich Low_complexity Low_complexity 1 21 0 5 761 226 250 14 42 chr3R 23079849 23079920 -4825133 + (TATATG)n Simple_repeat Simple_repeat 5 73 0 5 761 328 313 7 7 chr3R 23081493 23081641 -4823412 + (CGA)n Simple_repeat Simple_repeat 1 148 0 5 761 291 279 0 0 chr3R 23087377 23087456 -4817597 + CT-rich Low_complexity Low_complexity 2 80 0 5 761 216 143 0 0 chr3R 23089288 23089330 -4815723 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 761 22 0 0 0 chr3R 23094431 23094453 -4810600 + AT_rich Low_complexity Low_complexity 1 22 0 5 761 183 42 0 0 chr3R 23096209 23096233 -4808820 + (CCCGAA)n Simple_repeat Simple_repeat 4 27 0 5 761 186 103 0 0 chr3R 23096344 23096373 -4808680 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 761 309 118 0 0 chr3R 23096670 23096721 -4808332 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 761 23 54 0 0 chr3R 23100242 23100279 -4804774 + AT_rich Low_complexity Low_complexity 1 37 0 5 761 26 50 0 0 chr3R 23100400 23100440 -4804613 + AT_rich Low_complexity Low_complexity 1 40 0 5 761 180 0 0 0 chr3R 23103179 23103199 -4801854 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 761 237 326 0 0 chr3R 23103380 23103469 -4801584 + (TCG)n Simple_repeat Simple_repeat 3 91 0 5 761 23 0 0 0 chr3R 23106461 23106484 -4798569 + AT_rich Low_complexity Low_complexity 1 23 0 5 761 225 0 0 0 chr3R 23107886 23107911 -4797142 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 761 34 55 0 0 chr3R 23109188 23109243 -4795810 + AT_rich Low_complexity Low_complexity 1 55 0 5 761 304 316 0 0 chr3R 23116477 23116635 -4788418 + (CGA)n Simple_repeat Simple_repeat 3 160 0 5 761 215 145 0 46 chr3R 23116646 23116711 -4788342 + (CTA)n Simple_repeat Simple_repeat 2 63 0 5 761 25 31 0 0 chr3R 23119810 23119842 -4785211 + AT_rich Low_complexity Low_complexity 1 32 0 5 761 219 88 0 0 chr3R 23125497 23125531 -4779522 + (CAT)n Simple_repeat Simple_repeat 1 34 0 5 761 24 0 0 0 chr3R 23131566 23131590 -4773463 + AT_rich Low_complexity Low_complexity 1 24 0 5 761 28 0 0 0 chr3R 23132980 23133008 -4772045 + AT_rich Low_complexity Low_complexity 1 28 0 5 761 24 0 0 0 chr3R 23138067 23138091 -4766962 + AT_rich Low_complexity Low_complexity 1 24 0 5 761 203 171 0 0 chr3R 23140852 23140887 -4764166 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 761 435 38 0 0 chr3R 23142842 23142895 -4762158 + (ATG)n Simple_repeat Simple_repeat 1 53 0 5 761 27 49 0 0 chr3R 23147754 23147795 -4757258 + AT_rich Low_complexity Low_complexity 1 41 0 5 761 291 130 0 0 chr3R 23149113 23149167 -4755886 + (ATG)n Simple_repeat Simple_repeat 1 54 0 5 761 237 108 0 0 chr3R 23152601 23152638 -4752415 + (CAGTT)n Simple_repeat Simple_repeat 4 40 0 5 761 230 229 0 0 chr3R 23153914 23153975 -4751078 + (CATCC)n Simple_repeat Simple_repeat 5 65 0 5 761 210 227 0 0 chr3R 23154149 23154224 -4750829 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 761 23 54 0 0 chr3R 23155090 23155127 -4749926 + AT_rich Low_complexity Low_complexity 1 37 0 5 761 189 0 0 0 chr3R 23158401 23158422 -4746631 + (TGG)n Simple_repeat Simple_repeat 3 23 0 5 761 210 91 0 0 chr3R 23158496 23158529 -4746524 + (CAA)n Simple_repeat Simple_repeat 3 35 0 5 761 182 105 26 0 chr3R 23158652 23158690 -4746363 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 761 23 0 0 0 chr3R 23165034 23165057 -4739996 + AT_rich Low_complexity Low_complexity 1 23 0 5 761 183 80 0 0 chr3R 23165830 23165855 -4739198 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 761 201 132 0 0 chr3R 23166502 23166540 -4738513 + (CAG)n Simple_repeat Simple_repeat 1 38 0 5 761 182 62 31 0 chr3R 23167135 23167167 -4737886 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 5 761 3781 7 0 0 chr3R 23168569 23168986 -4736067 - TIRANT_LTR LTR Gypsy 0 417 1 5 761 70919 0 0 0 chr3R 23168986 23176676 -4728377 - TIRANT_I LTR Gypsy 0 7692 1 5 761 3781 7 0 0 chr3R 23176676 23177093 -4727960 - TIRANT_LTR LTR Gypsy 0 417 1 5 761 222 91 0 0 chr3R 23177497 23177530 -4727523 + (TA)n Simple_repeat Simple_repeat 1 33 0 5 761 231 36 0 0 chr3R 23185590 23185618 -4719435 + (CAA)n Simple_repeat Simple_repeat 1 28 0 5 761 21 36 0 0 chr3R 23186395 23186423 -4718630 + AT_rich Low_complexity Low_complexity 1 28 0 5 761 203 0 0 36 chr3R 23192111 23192139 -4712914 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 761 203 185 58 58 chr3R 23192293 23192362 -4712691 + (CATTT)n Simple_repeat Simple_repeat 2 70 0 5 761 301 287 14 35 chr3R 23193738 23193879 -4711174 + (ATG)n Simple_repeat Simple_repeat 3 140 0 5 761 183 42 0 0 chr3R 23196651 23196675 -4708378 + (CAG)n Simple_repeat Simple_repeat 1 24 0 5 761 243 271 0 34 chr3R 23197288 23197376 -4707677 + (CAG)n Simple_repeat Simple_repeat 1 85 0 5 761 210 143 0 0 chr3R 23197532 23197567 -4707486 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 5 761 226 224 17 0 chr3R 23197778 23197836 -4707217 + (CAG)n Simple_repeat Simple_repeat 2 60 0 5 761 248 127 18 0 chr3R 23198109 23198164 -4706889 + (CAG)n Simple_repeat Simple_repeat 1 56 0 5 761 210 71 0 0 chr3R 23198732 23198760 -4706293 + (CAGC)n Simple_repeat Simple_repeat 1 28 0 5 761 23 86 0 0 chr3R 23199064 23199122 -4705931 + AT_rich Low_complexity Low_complexity 1 58 0 5 762 25 0 0 0 chr3R 23200911 23200936 -4704117 + AT_rich Low_complexity Low_complexity 1 25 0 5 762 200 217 0 0 chr3R 23201034 23201080 -4703973 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 762 237 33 0 0 chr3R 23201204 23201234 -4703819 + (TTA)n Simple_repeat Simple_repeat 3 32 0 5 762 228 86 0 0 chr3R 23202243 23202278 -4702775 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 762 216 287 9 18 chr3R 23202440 23202550 -4702503 + (TG)n Simple_repeat Simple_repeat 2 110 0 5 762 220 91 45 0 chr3R 23202590 23202634 -4702419 + (GTTTG)n Simple_repeat Simple_repeat 3 48 0 5 762 208 257 0 28 chr3R 23202811 23202883 -4702170 + (CAA)n Simple_repeat Simple_repeat 2 71 0 5 762 206 224 0 0 chr3R 23207047 23207096 -4697957 + GA-rich Low_complexity Low_complexity 1 49 0 5 762 192 77 0 0 chr3R 23209808 23209834 -4695219 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 762 244 340 0 0 chr3R 23211813 23211907 -4693146 + A-rich Low_complexity Low_complexity 6 99 0 5 762 207 194 0 0 chr3R 23212045 23212081 -4692972 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 762 228 35 0 0 chr3R 23212987 23213016 -4692037 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 762 232 265 15 0 chr3R 23213504 23213572 -4691481 + (CAT)n Simple_repeat Simple_repeat 1 69 0 5 762 180 0 0 0 chr3R 23216247 23216267 -4688786 + (GCTG)n Simple_repeat Simple_repeat 4 23 0 5 762 22 0 0 0 chr3R 23217106 23217128 -4687925 + AT_rich Low_complexity Low_complexity 1 22 0 5 762 22 0 0 0 chr3R 23221270 23221292 -4683761 + AT_rich Low_complexity Low_complexity 1 22 0 5 762 22 56 0 0 chr3R 23224509 23224545 -4680508 + AT_rich Low_complexity Low_complexity 1 36 0 5 762 264 170 0 0 chr3R 23225878 23225931 -4679122 + (TGGA)n Simple_repeat Simple_repeat 3 55 0 5 762 23 0 0 0 chr3R 23226218 23226241 -4678812 + AT_rich Low_complexity Low_complexity 1 23 0 5 762 21 0 0 0 chr3R 23226517 23226538 -4678515 + AT_rich Low_complexity Low_complexity 1 21 0 5 762 198 0 0 0 chr3R 23228298 23228320 -4676733 + (TTTTA)n Simple_repeat Simple_repeat 1 22 0 5 762 192 97 0 0 chr3R 23229618 23229649 -4675404 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 762 201 128 51 0 chr3R 23229913 23229952 -4675101 + (CTCA)n Simple_repeat Simple_repeat 3 43 0 5 762 28 0 0 0 chr3R 23233203 23233231 -4671822 + AT_rich Low_complexity Low_complexity 1 28 0 5 762 22 0 0 0 chr3R 23237080 23237102 -4667951 + AT_rich Low_complexity Low_complexity 1 22 0 5 762 27 49 0 0 chr3R 23238157 23238198 -4666855 + AT_rich Low_complexity Low_complexity 1 41 0 5 762 216 0 0 0 chr3R 23241451 23241475 -4663578 + (CTG)n Simple_repeat Simple_repeat 1 24 0 5 762 210 37 0 0 chr3R 23241809 23241836 -4663217 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 762 200 189 0 0 chr3R 23243835 23243872 -4661181 + (CAACC)n Simple_repeat Simple_repeat 3 39 0 5 762 228 111 0 0 chr3R 23247216 23247252 -4657801 + (AAATG)n Simple_repeat Simple_repeat 2 37 0 5 762 216 0 0 0 chr3R 23250075 23250099 -4654954 + (A)n Simple_repeat Simple_repeat 1 24 0 5 762 222 150 0 0 chr3R 23250756 23250796 -4654257 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 762 210 222 0 0 chr3R 23251692 23251737 -4653316 + (CAGC)n Simple_repeat Simple_repeat 2 46 0 5 762 420 67 0 0 chr3R 23251923 23251983 -4653070 + (TC)n Simple_repeat Simple_repeat 2 61 0 5 762 225 0 0 0 chr3R 23252240 23252265 -4652788 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 762 24 32 0 0 chr3R 23253496 23253527 -4651526 + AT_rich Low_complexity Low_complexity 1 31 0 5 762 215 240 0 0 chr3R 23257225 23257275 -4647778 + (TCTG)n Simple_repeat Simple_repeat 3 52 0 5 762 225 65 0 0 chr3R 23258533 23258564 -4646489 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 762 180 182 0 0 chr3R 23258733 23258777 -4646276 + (CAG)n Simple_repeat Simple_repeat 1 44 0 5 762 203 244 0 0 chr3R 23260895 23260936 -4644117 + (CTTCG)n Simple_repeat Simple_repeat 4 44 0 5 762 368 69 0 65 chr3R 23263228 23263305 -4641748 + (CTG)n Simple_repeat Simple_repeat 2 73 0 5 762 35 24 0 0 chr3R 23264051 23264093 -4640960 + AT_rich Low_complexity Low_complexity 1 42 0 5 762 189 0 0 0 chr3R 23264887 23264908 -4640145 + (GAAAA)n Simple_repeat Simple_repeat 1 21 0 5 762 183 80 0 0 chr3R 23265569 23265594 -4639459 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 762 189 147 0 0 chr3R 23267161 23267195 -4637858 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 5 762 180 0 0 0 chr3R 23268177 23268197 -4636856 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 762 219 69 0 0 chr3R 23269168 23269197 -4635856 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 762 183 80 0 0 chr3R 23270595 23270620 -4634433 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 762 336 77 0 0 chr3R 23272964 23273016 -4632037 + (ATTCG)n Simple_repeat Simple_repeat 4 55 0 5 762 201 39 0 0 chr3R 23274758 23274784 -4630269 + (TTTTTA)n Simple_repeat Simple_repeat 2 27 0 5 762 22 35 0 0 chr3R 23275681 23275710 -4629343 + AT_rich Low_complexity Low_complexity 1 29 0 5 762 189 147 0 0 chr3R 23279037 23279071 -4625982 + (TTG)n Simple_repeat Simple_repeat 3 36 0 5 762 213 132 0 0 chr3R 23279126 23279164 -4625889 + (CAA)n Simple_repeat Simple_repeat 1 38 0 5 762 248 67 67 0 chr3R 23281447 23281492 -4623561 + (TTGTG)n Simple_repeat Simple_repeat 2 49 0 5 762 244 229 0 0 chr3R 23284145 23284193 -4620860 + (ATG)n Simple_repeat Simple_repeat 1 48 0 5 762 276 100 0 0 chr3R 23284551 23284591 -4620462 + (ACTG)n Simple_repeat Simple_repeat 3 42 0 5 762 27 0 0 0 chr3R 23286493 23286520 -4618533 + AT_rich Low_complexity Low_complexity 1 27 0 5 762 202 206 0 0 chr3R 23287856 23287890 -4617163 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 762 22 80 0 0 chr3R 23289714 23289764 -4615289 + AT_rich Low_complexity Low_complexity 1 50 0 5 762 21 0 0 0 chr3R 23295335 23295356 -4609697 + AT_rich Low_complexity Low_complexity 1 21 0 5 762 180 0 0 0 chr3R 23300458 23300478 -4604575 + (CGAAT)n Simple_repeat Simple_repeat 3 22 0 5 762 198 0 0 0 chr3R 23300573 23300595 -4604458 + (T)n Simple_repeat Simple_repeat 1 22 0 5 762 203 156 0 0 chr3R 23300782 23300814 -4604239 + CT-rich Low_complexity Low_complexity 2 33 0 5 762 201 74 0 0 chr3R 23301965 23301992 -4603061 + (CATA)n Simple_repeat Simple_repeat 2 28 0 5 762 189 74 0 0 chr3R 23317254 23317281 -4587772 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 762 237 108 0 0 chr3R 23317679 23317716 -4587337 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 762 285 135 0 0 chr3R 23320841 23320893 -4584160 + (CCAA)n Simple_repeat Simple_repeat 4 55 0 5 762 189 0 0 0 chr3R 23321035 23321056 -4583997 + (C)n Simple_repeat Simple_repeat 1 21 0 5 762 201 39 0 0 chr3R 23325712 23325738 -4579315 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 762 21 0 0 0 chr3R 23326175 23326196 -4578857 + AT_rich Low_complexity Low_complexity 1 21 0 5 762 180 0 0 0 chr3R 23326307 23326327 -4578726 + (CACTT)n Simple_repeat Simple_repeat 2 21 0 5 762 210 128 0 0 chr3R 23326328 23326367 -4578686 + (CAACT)n Simple_repeat Simple_repeat 3 41 0 5 762 25 0 0 0 chr3R 23326835 23326860 -4578193 + AT_rich Low_complexity Low_complexity 1 25 0 5 762 249 33 0 0 chr3R 23330383 23330413 -4574640 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 763 192 77 0 0 chr3R 23335340 23335366 -4569687 + (CAAAC)n Simple_repeat Simple_repeat 5 30 0 5 763 211 208 0 0 chr3R 23340014 23340062 -4564991 + (CAACC)n Simple_repeat Simple_repeat 1 48 0 5 763 21 0 0 0 chr3R 23340368 23340389 -4564664 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 219 293 0 13 chr3R 23344052 23344128 -4560925 + GA-rich Low_complexity Low_complexity 1 75 0 5 763 210 37 0 0 chr3R 23345458 23345485 -4559568 + (CAG)n Simple_repeat Simple_repeat 3 29 0 5 763 4017 0 0 0 chr3R 23346934 23347362 -4557691 + ROO_LTR LTR Pao 1 428 0 5 763 17628 2 4 0 chr3R 23347362 23349324 -4555729 + ROO_I LTR Pao 1 1969 -6287 5 763 52387 1 0 0 chr3R 23349296 23355043 -4550010 - ROO_I LTR Pao -564 7692 1947 5 763 5446 0 2 0 chr3R 23355033 23355657 -4549396 + ROO_I LTR Pao 7632 8256 0 5 763 4017 0 0 0 chr3R 23355657 23356085 -4548968 + ROO_LTR LTR Pao 1 428 0 5 763 212 154 0 0 chr3R 23357805 23357844 -4547209 + (CAG)n Simple_repeat Simple_repeat 2 40 0 5 763 180 200 0 0 chr3R 23358204 23358259 -4546794 + (CAG)n Simple_repeat Simple_repeat 1 55 0 5 763 192 40 0 0 chr3R 23358934 23358959 -4546094 + (CAG)n Simple_repeat Simple_repeat 3 27 0 5 763 180 77 0 0 chr3R 23361273 23361299 -4543754 + (A)n Simple_repeat Simple_repeat 1 26 0 5 763 22 0 0 0 chr3R 23361456 23361478 -4543575 + AT_rich Low_complexity Low_complexity 1 22 0 5 763 22 0 0 0 chr3R 23366132 23366154 -4538899 + AT_rich Low_complexity Low_complexity 1 22 0 5 763 249 83 0 0 chr3R 23366418 23366454 -4538599 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 763 22 0 0 0 chr3R 23366489 23366511 -4538542 + AT_rich Low_complexity Low_complexity 1 22 0 5 763 28 61 0 0 chr3R 23372797 23372846 -4532207 + AT_rich Low_complexity Low_complexity 1 49 0 5 763 21 0 0 0 chr3R 23374706 23374727 -4530326 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 25 0 0 0 chr3R 23383397 23383422 -4521631 + AT_rich Low_complexity Low_complexity 1 25 0 5 763 201 39 0 0 chr3R 23384265 23384291 -4520762 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 763 24 32 0 0 chr3R 23387390 23387421 -4517632 + AT_rich Low_complexity Low_complexity 1 31 0 5 763 203 133 0 22 chr3R 23387721 23387767 -4517286 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 763 187 150 16 16 chr3R 23387836 23387897 -4517156 + (TG)n Simple_repeat Simple_repeat 1 61 0 5 763 21 0 0 0 chr3R 23389533 23389554 -4515499 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 23 33 0 0 chr3R 23390479 23390509 -4514544 + AT_rich Low_complexity Low_complexity 1 30 0 5 763 185 0 40 0 chr3R 23390864 23390889 -4514164 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 763 183 100 0 0 chr3R 23393741 23393771 -4511282 + (CTG)n Simple_repeat Simple_repeat 1 30 0 5 763 184 100 0 48 chr3R 23396428 23396470 -4508583 + (CTTTG)n Simple_repeat Simple_repeat 3 42 0 5 763 198 0 0 0 chr3R 23396879 23396901 -4508152 + (TCC)n Simple_repeat Simple_repeat 3 24 0 5 763 293 68 23 0 chr3R 23397886 23397930 -4507123 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 763 204 275 14 0 chr3R 23398760 23398829 -4506224 + (CAG)n Simple_repeat Simple_repeat 1 70 0 5 763 220 27 54 0 chr3R 23401402 23401439 -4503614 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 763 235 213 0 0 chr3R 23401720 23401767 -4503286 + (CAAAG)n Simple_repeat Simple_repeat 3 49 0 5 763 291 71 0 0 chr3R 23403315 23403357 -4501696 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 5 763 22 35 0 0 chr3R 23406617 23406646 -4498407 + AT_rich Low_complexity Low_complexity 1 29 0 5 763 189 147 0 0 chr3R 23406668 23406702 -4498351 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 763 21 0 0 0 chr3R 23406731 23406752 -4498301 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 205 176 0 0 chr3R 23410983 23411017 -4494036 + (CAA)n Simple_repeat Simple_repeat 1 34 0 5 763 21 0 0 0 chr3R 23418142 23418163 -4486890 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 25 0 0 0 chr3R 23419733 23419758 -4485295 + AT_rich Low_complexity Low_complexity 1 25 0 5 763 24 32 0 0 chr3R 23420714 23420745 -4484308 + AT_rich Low_complexity Low_complexity 1 31 0 5 763 216 0 0 0 chr3R 23424131 23424155 -4480898 + (TTCTCC)n Simple_repeat Simple_repeat 5 28 0 5 763 183 100 0 0 chr3R 23424514 23424544 -4480509 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 5 763 195 162 0 0 chr3R 23424687 23424724 -4480329 + (TTA)n Simple_repeat Simple_repeat 2 38 0 5 763 21 36 0 0 chr3R 23430150 23430178 -4474875 + AT_rich Low_complexity Low_complexity 1 28 0 5 763 201 159 0 0 chr3R 23432948 23432992 -4472061 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 763 32 57 0 0 chr3R 23433273 23433326 -4471727 + AT_rich Low_complexity Low_complexity 1 53 0 5 763 498 150 0 0 chr3R 23435659 23435739 -4469314 - HOBO DNA hAT -2914 102 23 5 763 22 80 0 0 chr3R 23435878 23435928 -4469125 + AT_rich Low_complexity Low_complexity 1 50 0 5 763 207 0 0 0 chr3R 23445358 23445381 -4459672 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 5 763 22 0 0 0 chr3R 23446934 23446956 -4458097 + AT_rich Low_complexity Low_complexity 1 22 0 5 763 217 180 20 0 chr3R 23446988 23447038 -4458015 + A-rich Low_complexity Low_complexity 4 54 0 5 763 30 0 0 0 chr3R 23451067 23451097 -4453956 + AT_rich Low_complexity Low_complexity 1 30 0 5 763 21 0 0 0 chr3R 23452878 23452899 -4452154 + AT_rich Low_complexity Low_complexity 1 21 0 5 763 210 71 0 0 chr3R 23459769 23459797 -4445256 + (CATCG)n Simple_repeat Simple_repeat 2 29 0 5 763 23 33 0 0 chr3R 23461843 23461873 -4443180 + AT_rich Low_complexity Low_complexity 1 30 0 5 764 220 203 51 0 chr3R 23466522 23466581 -4438472 + (TTCGG)n Simple_repeat Simple_repeat 4 65 0 5 764 261 128 0 0 chr3R 23466728 23466775 -4438278 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 764 183 129 0 0 chr3R 23468007 23468038 -4437015 + (T)n Simple_repeat Simple_repeat 1 31 0 5 764 209 30 61 0 chr3R 23468315 23468348 -4436705 + (TATG)n Simple_repeat Simple_repeat 2 36 0 5 764 201 121 0 0 chr3R 23468432 23468465 -4436588 + (TTTAG)n Simple_repeat Simple_repeat 4 36 0 5 764 222 209 0 0 chr3R 23468683 23468726 -4436327 + GA-rich Low_complexity Low_complexity 2 44 0 5 764 201 139 0 0 chr3R 23471530 23471573 -4433480 + (CTTTA)n Simple_repeat Simple_repeat 4 46 0 5 764 352 82 16 16 chr3R 23473668 23473730 -4431323 + (CTG)n Simple_repeat Simple_repeat 1 62 0 5 764 28 0 0 0 chr3R 23475857 23475885 -4429168 + AT_rich Low_complexity Low_complexity 1 28 0 5 764 40 67 0 0 chr3R 23476457 23476532 -4428521 + AT_rich Low_complexity Low_complexity 1 75 0 5 764 49 43 0 0 chr3R 23477438 23477508 -4427545 + AT_rich Low_complexity Low_complexity 1 70 0 5 764 237 200 0 141 chr3R 23481971 23482099 -4422954 - ROO_I LTR Pao -7512 744 635 5 764 30 0 0 0 chr3R 23482716 23482746 -4422307 + AT_rich Low_complexity Low_complexity 1 30 0 5 764 46 0 0 0 chr3R 23483402 23483448 -4421605 + AT_rich Low_complexity Low_complexity 1 46 0 5 764 23 0 0 0 chr3R 23483483 23483506 -4421547 + AT_rich Low_complexity Low_complexity 1 23 0 5 764 304 72 0 35 chr3R 23483570 23483628 -4421425 + (TTG)n Simple_repeat Simple_repeat 2 57 0 5 764 243 88 0 0 chr3R 23494085 23494119 -4410934 + (TATG)n Simple_repeat Simple_repeat 1 34 0 5 764 27 0 0 0 chr3R 23504827 23504854 -4400199 + AT_rich Low_complexity Low_complexity 1 27 0 5 764 235 217 0 0 chr3R 23507120 23507166 -4397887 + (CCA)n Simple_repeat Simple_repeat 2 47 0 5 764 21 0 0 0 chr3R 23508027 23508048 -4397005 + AT_rich Low_complexity Low_complexity 1 21 0 5 764 200 259 0 18 chr3R 23514300 23514355 -4390698 + G-rich Low_complexity Low_complexity 27 80 0 5 764 233 133 0 32 chr3R 23517266 23517328 -4387725 + (CACTC)n Simple_repeat Simple_repeat 5 64 0 5 764 213 39 0 0 chr3R 23518758 23518784 -4386269 + (A)n Simple_repeat Simple_repeat 1 26 0 5 764 310 256 0 0 chr3R 23527581 23527659 -4377394 + (CAG)n Simple_repeat Simple_repeat 1 78 0 5 764 274 235 0 0 chr3R 23527888 23527956 -4377097 + ROO_I LTR Pao 657 724 -7532 5 764 32 26 0 0 chr3R 23532713 23532752 -4372301 + AT_rich Low_complexity Low_complexity 1 39 0 5 764 291 364 0 0 chr3R 23533529 23533669 -4371384 + GA-rich Low_complexity Low_complexity 5 144 0 5 764 21 0 0 0 chr3R 23536301 23536322 -4368731 + AT_rich Low_complexity Low_complexity 1 21 0 5 764 201 154 0 0 chr3R 23539102 23539141 -4365912 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 764 235 175 0 34 chr3R 23540228 23540287 -4364766 + (CTG)n Simple_repeat Simple_repeat 3 59 0 5 764 240 35 0 0 chr3R 23541860 23541889 -4363164 + (TCCTG)n Simple_repeat Simple_repeat 2 30 0 5 764 28 0 0 0 chr3R 23543285 23543313 -4361740 + AT_rich Low_complexity Low_complexity 1 28 0 5 764 219 69 0 0 chr3R 23546799 23546828 -4358225 + (CAGC)n Simple_repeat Simple_repeat 3 31 0 5 764 245 238 0 0 chr3R 23550007 23550070 -4354983 + (CAG)n Simple_repeat Simple_repeat 3 65 0 5 764 208 227 0 0 chr3R 23550194 23550238 -4354815 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 764 44776 1 0 0 chr3R 23551345 23556705 -4348348 + I_DM LINE I 98 5457 -774 5 764 189 0 0 0 chr3R 23556705 23556726 -4348327 + (TAA)n Simple_repeat Simple_repeat 3 23 0 5 764 231 173 0 0 chr3R 23559793 23559845 -4345208 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 764 216 111 0 0 chr3R 23562340 23562376 -4342677 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 764 213 250 0 0 chr3R 23563250 23563310 -4341743 + (CAA)n Simple_repeat Simple_repeat 3 62 0 5 764 191 143 0 39 chr3R 23571229 23571280 -4333773 + (CGAAA)n Simple_repeat Simple_repeat 3 51 0 5 764 216 171 0 0 chr3R 23575144 23575185 -4329868 + (CAGC)n Simple_repeat Simple_repeat 2 42 0 5 764 211 205 0 0 chr3R 23578848 23578887 -4326166 + A-rich Low_complexity Low_complexity 4 42 0 5 764 222 213 0 0 chr3R 23579509 23579556 -4325497 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 764 234 62 0 0 chr3R 23580961 23580993 -4324060 + (AGATG)n Simple_repeat Simple_repeat 4 35 0 5 764 218 182 0 0 chr3R 23584910 23584954 -4320099 + (CAG)n Simple_repeat Simple_repeat 3 46 0 5 764 248 278 43 22 chr3R 23588554 23588646 -4316407 + (TGGG)n Simple_repeat Simple_repeat 3 96 0 5 764 26 30 0 0 chr3R 23589131 23589164 -4315889 + AT_rich Low_complexity Low_complexity 1 33 0 5 764 186 43 0 0 chr3R 23589555 23589578 -4315475 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 764 285 272 0 0 chr3R 23590024 23590116 -4314937 + (CTG)n Simple_repeat Simple_repeat 3 94 0 5 764 261 0 0 0 chr3R 23590957 23590986 -4314067 + (GCTG)n Simple_repeat Simple_repeat 3 31 0 5 764 23 33 0 0 chr3R 23592783 23592813 -4312240 + AT_rich Low_complexity Low_complexity 1 30 0 5 765 201 39 0 0 chr3R 23594698 23594724 -4310329 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 765 241 281 0 0 chr3R 23596020 23596084 -4308969 + (TATG)n Simple_repeat Simple_repeat 1 64 0 5 765 222 225 0 0 chr3R 23596413 23596493 -4308560 + GA-rich Low_complexity Low_complexity 2 81 0 5 765 211 294 15 0 chr3R 23597082 23597150 -4307903 + (CATA)n Simple_repeat Simple_repeat 3 71 0 5 765 255 31 0 0 chr3R 23598043 23598075 -4306978 + (CAG)n Simple_repeat Simple_repeat 3 34 0 5 765 242 184 0 0 chr3R 23599348 23599386 -4305667 + G2_DM LINE Jockey 530 567 -2535 5 765 210 150 0 0 chr3R 23599389 23599429 -4305624 + (A)n Simple_repeat Simple_repeat 1 40 0 5 765 255 197 0 0 chr3R 23599733 23599794 -4305259 - ROO_I LTR Pao -7533 723 663 5 765 219 114 0 0 chr3R 23600194 23600229 -4304824 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 765 274 261 17 25 chr3R 23602405 23602523 -4302530 - XDMR_DM Unknown Unknown -202 158 42 5 765 2001 264 35 34 chr3R 23602417 23603503 -4301550 + SAR_DM Satellite Satellite 180 1266 -206 5 765 739 221 30 30 chr3R 23603278 23603544 -4301509 - XDMR_DM Unknown Unknown -4 356 91 5 765 270 56 0 0 chr3R 23605033 23605069 -4299984 + (TGAG)n Simple_repeat Simple_repeat 2 37 0 5 765 240 35 0 0 chr3R 23606885 23606914 -4298139 + (CAT)n Simple_repeat Simple_repeat 1 29 0 5 765 180 158 0 0 chr3R 23609396 23609434 -4295619 + T-rich Low_complexity Low_complexity 1 38 0 5 765 239 73 0 47 chr3R 23610699 23610742 -4294311 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 5 765 180 0 0 0 chr3R 23611162 23611182 -4293871 + (A)n Simple_repeat Simple_repeat 1 20 0 5 765 435 19 0 0 chr3R 23616741 23616793 -4288260 + (CAGC)n Simple_repeat Simple_repeat 3 54 0 5 765 261 0 0 0 chr3R 23617391 23617420 -4287633 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 765 28659 2 0 0 chr3R 23617420 23620493 -4284560 + DMRT1B LINE R1 2106 5178 -5 5 765 180 0 0 0 chr3R 23620493 23620513 -4284540 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 765 228 163 0 0 chr3R 23620877 23620920 -4284133 + (CCGAA)n Simple_repeat Simple_repeat 1 43 0 5 765 189 0 0 0 chr3R 23621772 23621793 -4283260 + (GTATG)n Simple_repeat Simple_repeat 3 23 0 5 765 195 42 0 0 chr3R 23622646 23622670 -4282383 + (TC)n Simple_repeat Simple_repeat 2 25 0 5 765 210 200 36 0 chr3R 23626919 23626974 -4278079 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 765 23 0 0 0 chr3R 23627616 23627639 -4277414 + AT_rich Low_complexity Low_complexity 1 23 0 5 765 215 218 18 0 chr3R 23628296 23628351 -4276702 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 765 206 163 0 20 chr3R 23629670 23629720 -4275333 + GA-rich Low_complexity Low_complexity 3 51 0 5 765 231 61 0 0 chr3R 23633370 23633403 -4271650 + (CACTG)n Simple_repeat Simple_repeat 3 35 0 5 765 201 271 0 0 chr3R 23637169 23637217 -4267836 + (CAA)n Simple_repeat Simple_repeat 2 49 0 5 765 209 243 14 14 chr3R 23638394 23638465 -4266588 + (TG)n Simple_repeat Simple_repeat 2 72 0 5 765 195 42 0 0 chr3R 23638630 23638654 -4266399 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 765 206 231 0 0 chr3R 23641163 23641215 -4263838 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 765 243 0 0 0 chr3R 23641378 23641405 -4263648 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 765 21 0 0 0 chr3R 23642919 23642940 -4262113 + GC_rich Low_complexity Low_complexity 1 21 0 5 765 205 171 0 0 chr3R 23645083 23645118 -4259935 + GA-rich Low_complexity Low_complexity 4 38 0 5 765 26 64 0 0 chr3R 23646010 23646057 -4258996 + AT_rich Low_complexity Low_complexity 1 47 0 5 765 182 37 37 0 chr3R 23646685 23646712 -4258341 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 765 180 152 0 0 chr3R 23648873 23648906 -4256147 + (CGAGT)n Simple_repeat Simple_repeat 3 35 0 5 765 207 139 0 0 chr3R 23652925 23652961 -4252092 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 765 206 245 0 0 chr3R 23653082 23653135 -4251918 + T-rich Low_complexity Low_complexity 1 53 0 5 765 201 158 0 0 chr3R 23654545 23654583 -4250470 + (ATG)n Simple_repeat Simple_repeat 3 40 0 5 765 201 133 0 0 chr3R 23657262 23657292 -4247761 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 765 225 200 0 0 chr3R 23658369 23658414 -4246639 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 765 33 43 0 0 chr3R 23659483 23659530 -4245523 + AT_rich Low_complexity Low_complexity 1 47 0 5 765 180 0 0 0 chr3R 23660470 23660490 -4244563 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 765 25 0 0 0 chr3R 23661078 23661103 -4243950 + AT_rich Low_complexity Low_complexity 1 25 0 5 765 210 71 0 0 chr3R 23662211 23662239 -4242814 + (ATTCG)n Simple_repeat Simple_repeat 5 32 0 5 765 208 280 0 0 chr3R 23662758 23662808 -4242245 + (TCCG)n Simple_repeat Simple_repeat 1 50 0 5 765 216 67 0 0 chr3R 23665081 23665111 -4239942 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 765 21 0 0 0 chr3R 23666635 23666656 -4238397 + AT_rich Low_complexity Low_complexity 1 21 0 5 765 183 129 0 0 chr3R 23667019 23667050 -4238003 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 765 200 149 0 21 chr3R 23667081 23667129 -4237924 + GA-rich Low_complexity Low_complexity 3 49 0 5 765 21 36 0 0 chr3R 23667794 23667822 -4237231 + AT_rich Low_complexity Low_complexity 1 28 0 5 765 21 36 0 0 chr3R 23667885 23667913 -4237140 + AT_rich Low_complexity Low_complexity 1 28 0 5 765 198 0 0 0 chr3R 23668649 23668671 -4236382 + (TAA)n Simple_repeat Simple_repeat 2 23 0 5 765 212 111 0 53 chr3R 23669942 23669980 -4235073 + (CGTG)n Simple_repeat Simple_repeat 3 38 0 5 765 231 36 0 0 chr3R 23674978 23675006 -4230047 + (CAGTT)n Simple_repeat Simple_repeat 1 28 0 5 765 211 244 0 0 chr3R 23675523 23675591 -4229462 + (TA)n Simple_repeat Simple_repeat 1 68 0 5 765 21 36 0 0 chr3R 23678518 23678546 -4226507 + AT_rich Low_complexity Low_complexity 1 28 0 5 765 22 35 0 0 chr3R 23679505 23679534 -4225519 + AT_rich Low_complexity Low_complexity 1 29 0 5 765 23 0 0 0 chr3R 23680045 23680068 -4224985 + AT_rich Low_complexity Low_complexity 1 23 0 5 765 213 154 0 0 chr3R 23681461 23681500 -4223553 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 765 210 37 0 0 chr3R 23682322 23682349 -4222704 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 765 11681 17 7 0 chr3R 23682536 23683961 -4221092 - M4DM DNA Transib 0 1435 1 5 765 2879 3 0 0 chr3R 23688730 23689060 -4215993 - TRANSPAC_LTR LTR Gypsy 0 330 1 5 765 38733 2 0 0 chr3R 23689059 23693648 -4211405 - TRANSPAC_I LTR Gypsy 0 4590 1 5 765 2879 3 0 0 chr3R 23693648 23693978 -4211075 - TRANSPAC_LTR LTR Gypsy 0 330 1 5 765 222 229 0 0 chr3R 23694770 23694818 -4210235 + (TCTG)n Simple_repeat Simple_repeat 4 51 0 5 765 211 167 42 0 chr3R 23695384 23695432 -4209621 + (CACCAT)n Simple_repeat Simple_repeat 4 53 0 5 765 216 0 0 0 chr3R 23696244 23696268 -4208785 + (CATATA)n Simple_repeat Simple_repeat 5 28 0 5 765 180 0 0 0 chr3R 23696400 23696420 -4208633 + (CAG)n Simple_repeat Simple_repeat 1 20 0 5 765 213 200 0 0 chr3R 23697708 23697753 -4207300 + (CAGCC)n Simple_repeat Simple_repeat 5 49 0 5 765 21 0 0 0 chr3R 23698820 23698841 -4206212 + AT_rich Low_complexity Low_complexity 1 21 0 5 765 228 122 0 0 chr3R 23700716 23700757 -4204296 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 765 3344 7 7 7 chr3R 23701476 23701890 -4203163 + DM297_LTR LTR Gypsy 1 414 0 5 765 51055 7 0 1 chr3R 23701890 23708060 -4196993 + DM297_I LTR Gypsy 1 6167 0 5 765 3368 5 7 7 chr3R 23708060 23708474 -4196579 + DM297_LTR LTR Gypsy 1 414 0 5 765 264 77 0 0 chr3R 23710003 23710042 -4195011 + (ATTG)n Simple_repeat Simple_repeat 1 39 0 5 765 21 0 0 0 chr3R 23711413 23711434 -4193619 + AT_rich Low_complexity Low_complexity 1 21 0 5 765 23 0 0 0 chr3R 23713766 23713789 -4191264 + AT_rich Low_complexity Low_complexity 1 23 0 5 765 219 305 0 0 chr3R 23715917 23715976 -4189077 + (TATG)n Simple_repeat Simple_repeat 1 59 0 5 765 228 200 0 0 chr3R 23716187 23716257 -4188796 + A-rich Low_complexity Low_complexity 1 70 0 5 765 204 97 0 0 chr3R 23717072 23717103 -4187950 + (T)n Simple_repeat Simple_repeat 1 31 0 5 765 186 133 0 0 chr3R 23718525 23718555 -4186498 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 765 192 77 0 0 chr3R 23718838 23718864 -4186189 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 765 189 132 0 0 chr3R 23720913 23720951 -4184102 + (TTCTG)n Simple_repeat Simple_repeat 1 38 0 5 765 22 0 0 0 chr3R 23722940 23722962 -4182091 + AT_rich Low_complexity Low_complexity 1 22 0 5 766 189 175 0 0 chr3R 23724312 23724352 -4180701 + (CATAC)n Simple_repeat Simple_repeat 4 43 0 5 766 228 67 0 0 chr3R 23727131 23727161 -4177892 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 766 225 132 0 0 chr3R 23728958 23728996 -4176057 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 766 21 0 0 0 chr3R 23730950 23730971 -4174082 + AT_rich Low_complexity Low_complexity 1 21 0 5 766 28 86 0 0 chr3R 23732219 23732289 -4172764 + AT_rich Low_complexity Low_complexity 1 70 0 5 766 23 0 0 0 chr3R 23733470 23733493 -4171560 + AT_rich Low_complexity Low_complexity 1 23 0 5 766 258 269 0 0 chr3R 23733881 23733959 -4171094 + T-rich Low_complexity Low_complexity 1 78 0 5 766 270 56 0 0 chr3R 23734362 23734398 -4170655 + (CAG)n Simple_repeat Simple_repeat 1 36 0 5 766 198 194 0 0 chr3R 23734901 23734963 -4170090 + (CCCA)n Simple_repeat Simple_repeat 1 62 0 5 766 291 93 0 0 chr3R 23735366 23735409 -4169644 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 766 192 77 0 0 chr3R 23735626 23735652 -4169401 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 766 214 29 57 0 chr3R 23737436 23737471 -4167582 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 766 25 0 0 0 chr3R 23742324 23742349 -4162704 + AT_rich Low_complexity Low_complexity 1 25 0 5 766 30 0 0 0 chr3R 23745227 23745257 -4159796 + AT_rich Low_complexity Low_complexity 1 30 0 5 766 195 69 0 0 chr3R 23746309 23746338 -4158715 + (TCC)n Simple_repeat Simple_repeat 2 30 0 5 766 29 0 0 0 chr3R 23746731 23746760 -4158293 + AT_rich Low_complexity Low_complexity 1 29 0 5 766 26 50 0 0 chr3R 23746870 23746910 -4158143 + AT_rich Low_complexity Low_complexity 1 40 0 5 766 24 0 0 0 chr3R 23751356 23751380 -4153673 + AT_rich Low_complexity Low_complexity 1 24 0 5 766 22 0 0 0 chr3R 23752136 23752158 -4152895 + AT_rich Low_complexity Low_complexity 1 22 0 5 766 21 0 0 0 chr3R 23757006 23757027 -4148026 + AT_rich Low_complexity Low_complexity 1 21 0 5 766 35 0 0 0 chr3R 23763716 23763751 -4141302 + AT_rich Low_complexity Low_complexity 1 35 0 5 766 350 176 0 73 chr3R 23765736 23765901 -4139152 + (CCA)n Simple_repeat Simple_repeat 1 153 0 5 766 24 0 0 0 chr3R 23769156 23769180 -4135873 + AT_rich Low_complexity Low_complexity 1 24 0 5 766 235 85 21 21 chr3R 23769319 23769367 -4135686 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 766 288 130 0 0 chr3R 23771741 23771787 -4133266 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 766 213 250 0 0 chr3R 23772475 23772523 -4132530 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 766 183 186 0 0 chr3R 23773370 23773413 -4131640 + (TGG)n Simple_repeat Simple_repeat 2 44 0 5 766 216 303 0 0 chr3R 23775711 23775810 -4129243 + GA-rich Low_complexity Low_complexity 2 100 0 5 766 21 36 0 0 chr3R 23784904 23784932 -4120121 + AT_rich Low_complexity Low_complexity 1 28 0 5 766 25 31 0 0 chr3R 23786889 23786921 -4118132 + AT_rich Low_complexity Low_complexity 1 32 0 5 766 21 36 0 0 chr3R 23787550 23787578 -4117475 + AT_rich Low_complexity Low_complexity 1 28 0 5 766 25 31 0 0 chr3R 23789535 23789567 -4115486 + AT_rich Low_complexity Low_complexity 1 32 0 5 766 203 182 0 0 chr3R 23794510 23794543 -4110510 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 5 766 180 0 0 0 chr3R 23797549 23797569 -4107484 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 766 264 261 0 0 chr3R 23799283 23799348 -4105705 + (CTG)n Simple_repeat Simple_repeat 3 67 0 5 766 233 220 0 0 chr3R 23800530 23800580 -4104473 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 766 198 0 0 0 chr3R 23800731 23800753 -4104300 + (TA)n Simple_repeat Simple_repeat 2 23 0 5 766 198 0 0 0 chr3R 23802739 23802761 -4102292 + (A)n Simple_repeat Simple_repeat 1 22 0 5 766 27 0 0 0 chr3R 23803239 23803266 -4101787 + AT_rich Low_complexity Low_complexity 1 27 0 5 766 27 62 0 0 chr3R 23803286 23803334 -4101719 + AT_rich Low_complexity Low_complexity 1 48 0 5 766 30 27 0 0 chr3R 23803866 23803903 -4101150 + AT_rich Low_complexity Low_complexity 1 37 0 5 766 192 77 0 0 chr3R 23805291 23805317 -4099736 + (CATTG)n Simple_repeat Simple_repeat 2 27 0 5 766 189 0 0 0 chr3R 23806874 23806895 -4098158 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 766 24 0 0 0 chr3R 23806949 23806973 -4098080 + AT_rich Low_complexity Low_complexity 1 24 0 5 766 22 0 0 0 chr3R 23809207 23809229 -4095824 + AT_rich Low_complexity Low_complexity 1 22 0 5 766 216 0 0 0 chr3R 23812014 23812038 -4093015 + (A)n Simple_repeat Simple_repeat 1 24 0 5 766 195 42 0 0 chr3R 23813648 23813672 -4091381 + (GA)n Simple_repeat Simple_repeat 2 25 0 5 766 21 0 0 0 chr3R 23814389 23814410 -4090643 + AT_rich Low_complexity Low_complexity 1 21 0 5 766 198 0 0 0 chr3R 23818024 23818046 -4087007 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 766 22 35 0 0 chr3R 23818497 23818526 -4086527 + AT_rich Low_complexity Low_complexity 1 29 0 5 766 210 266 0 71 chr3R 23822870 23822955 -4082098 + T-rich Low_complexity Low_complexity 3 81 0 5 766 223 300 0 0 chr3R 23823461 23823531 -4081522 + (TG)n Simple_repeat Simple_repeat 1 70 0 5 766 189 0 0 0 chr3R 23823913 23823934 -4081119 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 766 186 171 0 0 chr3R 23824235 23824276 -4080777 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 766 21 36 0 0 chr3R 23824521 23824549 -4080504 + AT_rich Low_complexity Low_complexity 1 28 0 5 766 195 125 0 0 chr3R 23825723 23825763 -4079290 + (CTG)n Simple_repeat Simple_repeat 2 41 0 5 766 23 0 0 0 chr3R 23826840 23826863 -4078190 + AT_rich Low_complexity Low_complexity 1 23 0 5 766 226 271 0 0 chr3R 23829139 23829198 -4075855 + (CAGGG)n Simple_repeat Simple_repeat 4 62 0 5 766 180 125 0 0 chr3R 23833764 23833796 -4071257 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 766 23 0 0 0 chr3R 23834199 23834222 -4070831 + AT_rich Low_complexity Low_complexity 1 23 0 5 766 215 284 0 0 chr3R 23837522 23837589 -4067464 + (CA)n Simple_repeat Simple_repeat 1 67 0 5 766 39 80 0 0 chr3R 23839084 23839172 -4065881 + AT_rich Low_complexity Low_complexity 1 88 0 5 766 21 36 0 0 chr3R 23840398 23840426 -4064627 + AT_rich Low_complexity Low_complexity 1 28 0 5 766 29 94 0 0 chr3R 23842053 23842138 -4062915 + AT_rich Low_complexity Low_complexity 1 85 0 5 766 21 57 0 0 chr3R 23851541 23851576 -4053477 + AT_rich Low_complexity Low_complexity 1 35 0 5 766 201 147 0 0 chr3R 23851880 23851914 -4053139 + (TC)n Simple_repeat Simple_repeat 2 35 0 5 766 207 0 0 0 chr3R 23852211 23852234 -4052819 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 766 27 49 0 0 chr3R 23852915 23852956 -4052097 + AT_rich Low_complexity Low_complexity 1 41 0 5 766 216 111 0 0 chr3R 23853715 23853751 -4051302 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 766 213 229 21 0 chr3R 23854012 23854060 -4050993 + (CTG)n Simple_repeat Simple_repeat 3 51 0 5 766 23 0 0 0 chr3R 23854077 23854100 -4050953 + AT_rich Low_complexity Low_complexity 1 23 0 5 767 26 64 0 0 chr3R 23857960 23858007 -4047046 + AT_rich Low_complexity Low_complexity 1 47 0 5 767 201 184 0 20 chr3R 23859530 23859580 -4045473 + T-rich Low_complexity Low_complexity 3 51 0 5 767 219 170 0 0 chr3R 23861398 23861445 -4043608 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 767 231 61 0 0 chr3R 23862013 23862046 -4043007 + (A)n Simple_repeat Simple_repeat 1 33 0 5 767 27 0 0 0 chr3R 23864118 23864145 -4040908 + AT_rich Low_complexity Low_complexity 1 27 0 5 767 357 224 66 2 chr3R 23865299 23865427 -4039626 + XDMR_DM Unknown Unknown 3 129 -232 5 767 219 69 0 0 chr3R 23866429 23866458 -4038595 + (CAATC)n Simple_repeat Simple_repeat 3 31 0 5 767 252 0 0 0 chr3R 23866965 23866993 -4038060 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 767 300 127 0 0 chr3R 23868797 23868852 -4036201 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 767 28 61 0 0 chr3R 23869523 23869572 -4035481 + AT_rich Low_complexity Low_complexity 1 49 0 5 767 24 32 0 0 chr3R 23870412 23870443 -4034610 + AT_rich Low_complexity Low_complexity 1 31 0 5 767 189 94 0 0 chr3R 23871065 23871097 -4033956 + (CAG)n Simple_repeat Simple_repeat 3 34 0 5 767 189 0 0 0 chr3R 23871516 23871537 -4033516 + (TG)n Simple_repeat Simple_repeat 1 21 0 5 767 26 0 0 0 chr3R 23871847 23871873 -4033180 + AT_rich Low_complexity Low_complexity 1 26 0 5 767 223 189 19 0 chr3R 23872680 23872733 -4032320 + (TGGG)n Simple_repeat Simple_repeat 1 54 0 5 767 27 0 0 0 chr3R 23873527 23873554 -4031499 + AT_rich Low_complexity Low_complexity 1 27 0 5 767 26 50 0 0 chr3R 23874330 23874370 -4030683 + AT_rich Low_complexity Low_complexity 1 40 0 5 767 27 29 0 0 chr3R 23874593 23874627 -4030426 + AT_rich Low_complexity Low_complexity 1 34 0 5 767 22 0 0 0 chr3R 23874763 23874785 -4030268 + AT_rich Low_complexity Low_complexity 1 22 0 5 767 253 130 0 42 chr3R 23875649 23875721 -4029332 + (CAG)n Simple_repeat Simple_repeat 1 69 0 5 767 373 167 0 24 chr3R 23875769 23875892 -4029161 + (CAG)n Simple_repeat Simple_repeat 1 120 0 5 767 251 131 0 47 chr3R 23875939 23876003 -4029050 + (CAG)n Simple_repeat Simple_repeat 3 63 0 5 767 192 77 0 0 chr3R 23876691 23876717 -4028336 + (ATTCG)n Simple_repeat Simple_repeat 3 28 0 5 767 225 0 0 0 chr3R 23876878 23876903 -4028150 + (T)n Simple_repeat Simple_repeat 1 25 0 5 767 21 0 0 0 chr3R 23877596 23877617 -4027436 + AT_rich Low_complexity Low_complexity 1 21 0 5 767 27 29 0 0 chr3R 23877699 23877733 -4027320 + AT_rich Low_complexity Low_complexity 1 34 0 5 767 192 135 0 0 chr3R 23878718 23878755 -4026298 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 767 207 0 0 0 chr3R 23879869 23879892 -4025161 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 767 36 23 0 0 chr3R 23882955 23882998 -4022055 + AT_rich Low_complexity Low_complexity 1 43 0 5 767 291 140 0 0 chr3R 23884402 23884452 -4020601 + (CCA)n Simple_repeat Simple_repeat 3 52 0 5 767 197 133 0 62 chr3R 23888130 23888178 -4016875 + A-rich Low_complexity Low_complexity 1 45 0 5 767 21 36 0 0 chr3R 23888774 23888802 -4016251 + AT_rich Low_complexity Low_complexity 1 28 0 5 767 47232 1 0 1 chr3R 23894269 23899657 -4005396 - I_DM LINE I -750 5481 95 5 767 28 0 0 0 chr3R 23902906 23902934 -4002119 + AT_rich Low_complexity Low_complexity 1 28 0 5 767 212 244 0 0 chr3R 23904447 23904488 -4000565 + (CCCGAA)n Simple_repeat Simple_repeat 4 44 0 5 767 26 0 0 0 chr3R 23907383 23907409 -3997644 + AT_rich Low_complexity Low_complexity 1 26 0 5 767 212 100 0 24 chr3R 23909728 23909769 -3995284 + (CAA)n Simple_repeat Simple_repeat 2 41 0 5 767 341 95 16 0 chr3R 23910476 23910539 -3994514 + (ATTCG)n Simple_repeat Simple_repeat 1 64 0 5 767 25 31 0 0 chr3R 23911377 23911409 -3993644 + AT_rich Low_complexity Low_complexity 1 32 0 5 767 22 35 0 0 chr3R 23911746 23911775 -3993278 + AT_rich Low_complexity Low_complexity 1 29 0 5 767 253 152 0 43 chr3R 23912689 23912758 -3992295 + (CAAAC)n Simple_repeat Simple_repeat 5 70 0 5 767 23 33 0 0 chr3R 23914218 23914248 -3990805 + AT_rich Low_complexity Low_complexity 1 30 0 5 767 232 214 0 18 chr3R 23914493 23914550 -3990503 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 767 213 132 0 0 chr3R 23914611 23914649 -3990404 + (CAAAAA)n Simple_repeat Simple_repeat 1 38 0 5 767 223 175 0 0 chr3R 23915402 23915442 -3989611 + A-rich Low_complexity Low_complexity 3 42 0 5 767 217 275 0 12 chr3R 23915460 23915541 -3989512 + (CAGAGA)n Simple_repeat Simple_repeat 3 82 0 5 767 240 35 0 0 chr3R 23915560 23915589 -3989464 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 767 229 143 61 0 chr3R 23916308 23916357 -3988696 + A-rich Low_complexity Low_complexity 2 53 0 5 767 32 67 0 0 chr3R 23919262 23919322 -3985731 + AT_rich Low_complexity Low_complexity 1 60 0 5 767 21 0 0 0 chr3R 23919511 23919532 -3985521 + AT_rich Low_complexity Low_complexity 1 21 0 5 767 219 88 0 0 chr3R 23920730 23920764 -3984289 + (CAG)n Simple_repeat Simple_repeat 2 35 0 5 767 23 0 0 0 chr3R 23924948 23924971 -3980082 + AT_rich Low_complexity Low_complexity 1 23 0 5 767 243 229 11 46 chr3R 23929451 23929538 -3975515 + A-rich Low_complexity Low_complexity 5 88 0 5 767 202 250 17 0 chr3R 23931812 23931872 -3973181 + (TTTA)n Simple_repeat Simple_repeat 2 62 0 5 767 246 32 0 0 chr3R 23931980 23932011 -3973042 + (CAG)n Simple_repeat Simple_repeat 2 32 0 5 767 30 27 0 0 chr3R 23934432 23934469 -3970584 + AT_rich Low_complexity Low_complexity 1 37 0 5 767 36 53 0 0 chr3R 23936988 23937045 -3968008 + AT_rich Low_complexity Low_complexity 1 57 0 5 767 25 51 0 0 chr3R 23938415 23938454 -3966599 + AT_rich Low_complexity Low_complexity 1 39 0 5 767 195 129 0 0 chr3R 23939138 23939169 -3965884 + (TTCCG)n Simple_repeat Simple_repeat 5 35 0 5 767 214 262 0 15 chr3R 23941799 23941865 -3963188 + (TCCA)n Simple_repeat Simple_repeat 3 67 0 5 767 231 103 0 0 chr3R 23943163 23943202 -3961851 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 767 228 67 0 0 chr3R 23943694 23943724 -3961329 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 767 222 62 0 0 chr3R 23946099 23946131 -3958922 + (GCTG)n Simple_repeat Simple_repeat 1 32 0 5 767 234 245 56 56 chr3R 23947224 23947384 -3957669 + XDMR_DM Unknown Unknown 194 353 -7 5 767 299 195 67 50 chr3R 23947271 23947390 -3957663 - SAR_DM Satellite Satellite -1026 446 326 5 767 180 77 0 0 chr3R 23949292 23949318 -3955735 + (CCCA)n Simple_repeat Simple_repeat 4 29 0 5 767 200 34 0 33 chr3R 23950931 23950961 -3954092 + (CTG)n Simple_repeat Simple_repeat 1 29 0 5 767 210 284 12 0 chr3R 23951705 23951786 -3953267 + (CA)n Simple_repeat Simple_repeat 1 82 0 5 767 26 0 0 0 chr3R 23954488 23954514 -3950539 + AT_rich Low_complexity Low_complexity 1 26 0 5 767 248 226 0 0 chr3R 23954617 23954670 -3950383 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 767 205 246 0 0 chr3R 23956779 23956836 -3948217 + (CTG)n Simple_repeat Simple_repeat 3 59 0 5 767 25 0 0 0 chr3R 23957170 23957195 -3947858 + AT_rich Low_complexity Low_complexity 1 25 0 5 767 31 44 0 0 chr3R 23962048 23962093 -3942960 + AT_rich Low_complexity Low_complexity 1 45 0 5 767 180 0 0 0 chr3R 23962956 23962976 -3942077 + (TTCCG)n Simple_repeat Simple_repeat 1 20 0 5 767 23 0 0 0 chr3R 23963252 23963275 -3941778 + AT_rich Low_complexity Low_complexity 1 23 0 5 767 23 68 0 0 chr3R 23963319 23963363 -3941690 + AT_rich Low_complexity Low_complexity 1 44 0 5 767 28 0 0 0 chr3R 23968976 23969004 -3936049 + AT_rich Low_complexity Low_complexity 1 28 0 5 767 215 224 0 0 chr3R 23970551 23970600 -3934453 + (CTCA)n Simple_repeat Simple_repeat 4 52 0 5 767 30 0 0 0 chr3R 23971066 23971096 -3933957 + AT_rich Low_complexity Low_complexity 1 30 0 5 767 33 43 0 0 chr3R 23972040 23972087 -3932966 + AT_rich Low_complexity Low_complexity 1 47 0 5 767 229 314 0 0 chr3R 23972450 23972520 -3932533 + (CAG)n Simple_repeat Simple_repeat 1 70 0 5 767 223 186 0 0 chr3R 23973019 23973062 -3931991 + T-rich Low_complexity Low_complexity 1 43 0 5 767 183 80 0 0 chr3R 23973373 23973398 -3931655 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 767 200 128 26 0 chr3R 23973807 23973846 -3931207 + (CAG)n Simple_repeat Simple_repeat 3 42 0 5 767 297 186 0 0 chr3R 23973879 23973949 -3931104 + (CAG)n Simple_repeat Simple_repeat 1 70 0 5 767 22 0 0 0 chr3R 23974776 23974798 -3930255 + AT_rich Low_complexity Low_complexity 1 22 0 5 767 208 227 0 0 chr3R 23977326 23977370 -3927683 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 767 211 309 0 0 chr3R 23977763 23977831 -3927222 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 767 183 184 0 0 chr3R 23978106 23978144 -3926909 + (CCCA)n Simple_repeat Simple_repeat 3 40 0 5 767 21 36 0 0 chr3R 23979487 23979515 -3925538 + AT_rich Low_complexity Low_complexity 1 28 0 5 767 21 0 0 0 chr3R 23980559 23980580 -3924473 + AT_rich Low_complexity Low_complexity 1 21 0 5 768 21 0 0 0 chr3R 23987080 23987101 -3917952 + AT_rich Low_complexity Low_complexity 1 21 0 5 768 230 196 18 0 chr3R 23988926 23988982 -3916071 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 768 22 35 0 0 chr3R 23991918 23991947 -3913106 + AT_rich Low_complexity Low_complexity 1 29 0 5 768 23 0 0 0 chr3R 23992409 23992432 -3912621 + AT_rich Low_complexity Low_complexity 1 23 0 5 768 219 36 0 0 chr3R 23998612 23998640 -3906413 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 768 423 100 0 0 chr3R 23999462 23999532 -3905521 + (TAA)n Simple_repeat Simple_repeat 3 72 0 5 768 3168 17 0 0 chr3R 23999532 23999888 -3905165 + MDG1_LTR LTR Gypsy 87 442 0 5 768 1047 0 0 0 chr3R 23999888 24000000 -3905053 + MDG1_I LTR Gypsy 1 112 -6484 5 768 56051 6 19 2 chr3R 24000000 24006389 -3898664 + MDG1_I LTR Gypsy 113 6799 -98 5 768 423 100 0 0 chr3R 24006393 24006463 -3898590 + (TAA)n Simple_repeat Simple_repeat 3 72 0 5 768 3168 17 0 0 chr3R 24006463 24006819 -3898234 + MDG1_LTR LTR Gypsy 87 442 0 5 768 26 0 0 0 chr3R 24010174 24010200 -3894853 + AT_rich Low_complexity Low_complexity 1 26 0 5 768 233 231 25 13 chr3R 24012170 24012249 -3892804 + (TGGG)n Simple_repeat Simple_repeat 2 81 0 5 768 21 0 0 0 chr3R 24012629 24012650 -3892403 + AT_rich Low_complexity Low_complexity 1 21 0 5 768 247 277 35 80 chr3R 24014923 24015123 -3889930 - SAR_DM Satellite Satellite -1067 405 215 5 768 21 36 0 0 chr3R 24018901 24018929 -3886124 + AT_rich Low_complexity Low_complexity 1 28 0 5 768 213 306 0 0 chr3R 24020894 24020956 -3884097 + (CAA)n Simple_repeat Simple_repeat 3 64 0 5 768 21 0 0 0 chr3R 24024163 24024184 -3880869 + AT_rich Low_complexity Low_complexity 1 21 0 5 768 22 0 0 0 chr3R 24026400 24026422 -3878631 + AT_rich Low_complexity Low_complexity 1 22 0 5 768 21 82 0 0 chr3R 24027176 24027225 -3877828 + AT_rich Low_complexity Low_complexity 1 49 0 5 768 22 0 0 0 chr3R 24028446 24028468 -3876585 + AT_rich Low_complexity Low_complexity 1 22 0 5 768 180 176 0 0 chr3R 24028666 24028700 -3876353 + (CCCTA)n Simple_repeat Simple_repeat 5 38 0 5 768 213 139 0 0 chr3R 24032524 24032567 -3872486 + (ACTG)n Simple_repeat Simple_repeat 3 45 0 5 768 189 147 0 0 chr3R 24035380 24035414 -3869639 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 768 192 40 0 0 chr3R 24045005 24045030 -3860023 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 768 21 36 0 0 chr3R 24051183 24051211 -3853842 + AT_rich Low_complexity Low_complexity 1 28 0 5 768 22 0 0 0 chr3R 24053682 24053704 -3851349 + AT_rich Low_complexity Low_complexity 1 22 0 5 768 198 103 0 0 chr3R 24054373 24054402 -3850651 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 768 23 0 0 0 chr3R 24055382 24055405 -3849648 + AT_rich Low_complexity Low_complexity 1 23 0 5 768 222 37 0 0 chr3R 24058596 24058623 -3846430 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 768 210 191 0 0 chr3R 24058978 24059025 -3846028 + (TTG)n Simple_repeat Simple_repeat 2 48 0 5 768 209 307 0 0 chr3R 24059173 24059248 -3845805 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 768 180 0 0 0 chr3R 24060290 24060310 -3844743 + (CTTTA)n Simple_repeat Simple_repeat 2 21 0 5 768 200 167 20 20 chr3R 24061835 24061884 -3843169 + (TGG)n Simple_repeat Simple_repeat 3 51 0 5 768 23 0 0 0 chr3R 24062644 24062667 -3842386 + AT_rich Low_complexity Low_complexity 1 23 0 5 768 360 130 0 0 chr3R 24063526 24063595 -3841458 + (CAG)n Simple_repeat Simple_repeat 1 69 0 5 768 228 194 95 21 chr3R 24063613 24063708 -3841345 + ROO_I LTR Pao 628 729 -7527 5 768 232 143 0 41 chr3R 24063745 24063818 -3841235 + ROO_I LTR Pao 662 731 -7525 5 768 189 211 0 0 chr3R 24064658 24064710 -3840343 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 768 417 145 0 0 chr3R 24065243 24065319 -3839734 + (TA)n Simple_repeat Simple_repeat 1 76 0 5 768 25 31 0 0 chr3R 24065371 24065403 -3839650 + AT_rich Low_complexity Low_complexity 1 32 0 5 768 23 0 0 0 chr3R 24065540 24065563 -3839490 + AT_rich Low_complexity Low_complexity 1 23 0 5 768 189 121 0 0 chr3R 24066098 24066131 -3838922 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 768 198 0 0 0 chr3R 24067797 24067819 -3837234 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 768 189 0 0 0 chr3R 24068005 24068026 -3837027 + (CTA)n Simple_repeat Simple_repeat 1 21 0 5 768 26 0 0 0 chr3R 24068696 24068722 -3836331 + AT_rich Low_complexity Low_complexity 1 26 0 5 768 273 75 0 0 chr3R 24070771 24070811 -3834242 + (GAGTG)n Simple_repeat Simple_repeat 2 41 0 5 768 180 0 0 0 chr3R 24071893 24071913 -3833140 + (CAG)n Simple_repeat Simple_repeat 2 21 0 5 768 26 0 0 0 chr3R 24073255 24073281 -3831772 + AT_rich Low_complexity Low_complexity 1 26 0 5 768 273 75 0 0 chr3R 24075330 24075370 -3829683 + (GAGTG)n Simple_repeat Simple_repeat 2 41 0 5 768 180 0 0 0 chr3R 24076487 24076507 -3828546 + (CAG)n Simple_repeat Simple_repeat 2 21 0 5 768 26 0 0 0 chr3R 24078575 24078601 -3826452 + AT_rich Low_complexity Low_complexity 1 26 0 5 768 209 176 0 0 chr3R 24078901 24078935 -3826118 + (TTTCG)n Simple_repeat Simple_repeat 1 34 0 5 768 19328 7 1 0 chr3R 24079116 24081197 -3823856 + LINEJ1_DM LINE Jockey 8 2089 -2931 5 768 3036 0 0 17 chr3R 24081196 24081550 -3823503 + LINEJ1_DM LINE Jockey 4673 5020 0 5 768 21 0 0 0 chr3R 24081550 24081571 -3823482 + AT_rich Low_complexity Low_complexity 1 21 0 5 768 202 219 0 0 chr3R 24084209 24084250 -3820803 + (TATG)n Simple_repeat Simple_repeat 1 41 0 5 768 212 250 17 0 chr3R 24085629 24085689 -3819364 + (CATCC)n Simple_repeat Simple_repeat 5 65 0 5 768 28 0 0 0 chr3R 24087950 24087978 -3817075 + AT_rich Low_complexity Low_complexity 1 28 0 5 768 24 32 0 0 chr3R 24089128 24089159 -3815894 + AT_rich Low_complexity Low_complexity 1 31 0 5 768 21 0 0 0 chr3R 24091182 24091203 -3813850 + AT_rich Low_complexity Low_complexity 1 21 0 5 768 208 174 22 0 chr3R 24091640 24091686 -3813367 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 768 198 0 0 0 chr3R 24093591 24093613 -3811440 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 768 195 100 0 0 chr3R 24095981 24096011 -3809042 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 768 214 162 0 0 chr3R 24097315 24097352 -3807701 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 768 25 0 0 0 chr3R 24100351 24100376 -3804677 + AT_rich Low_complexity Low_complexity 1 25 0 5 768 322 172 0 0 chr3R 24100696 24100760 -3804293 - ROO_I LTR Pao -7547 709 646 5 768 444 156 33 0 chr3R 24111795 24111885 -3793168 - ROO_I LTR Pao -7513 743 651 5 768 204 294 0 0 chr3R 24113513 24113564 -3791489 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 768 23 0 0 0 chr3R 24113836 24113859 -3791194 + AT_rich Low_complexity Low_complexity 1 23 0 5 768 21 36 0 0 chr3R 24114234 24114262 -3790791 + AT_rich Low_complexity Low_complexity 1 28 0 5 768 21 36 0 0 chr3R 24115052 24115080 -3789973 + AT_rich Low_complexity Low_complexity 1 28 0 5 768 27 0 0 0 chr3R 24115175 24115202 -3789851 + AT_rich Low_complexity Low_complexity 1 27 0 5 768 204 209 0 0 chr3R 24116448 24116491 -3788562 + (CCCA)n Simple_repeat Simple_repeat 3 45 0 5 769 185 0 0 39 chr3R 24119719 24119745 -3785308 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 5 769 21 57 0 0 chr3R 24121283 24121318 -3783735 + AT_rich Low_complexity Low_complexity 1 35 0 5 769 191 136 0 43 chr3R 24122303 24122349 -3782704 + (CAA)n Simple_repeat Simple_repeat 2 45 0 5 769 210 250 0 16 chr3R 24125719 24125780 -3779273 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 769 218 171 0 0 chr3R 24127238 24127273 -3777780 + (CAG)n Simple_repeat Simple_repeat 1 35 0 5 769 3079 3 0 11 chr3R 24127901 24128256 -3776797 - LINEJ1_DM LINE Jockey 0 5020 4670 5 769 249 210 0 0 chr3R 24133810 24133872 -3771181 + (TGGG)n Simple_repeat Simple_repeat 3 64 0 5 769 251 204 0 0 chr3R 24138874 24138928 -3766125 + (GCTG)n Simple_repeat Simple_repeat 3 56 0 5 769 203 61 0 29 chr3R 24140258 24140292 -3764761 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 769 204 139 28 0 chr3R 24140700 24140736 -3764317 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 769 23 33 0 0 chr3R 24142142 24142172 -3762881 + AT_rich Low_complexity Low_complexity 1 30 0 5 769 22 35 0 0 chr3R 24143961 24143990 -3761063 + AT_rich Low_complexity Low_complexity 1 29 0 5 769 234 156 0 0 chr3R 24144027 24144072 -3760981 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 769 26 0 0 0 chr3R 24144078 24144104 -3760949 + AT_rich Low_complexity Low_complexity 1 26 0 5 769 279 54 0 0 chr3R 24145553 24145590 -3759463 + (TA)n Simple_repeat Simple_repeat 2 38 0 5 769 251 239 0 0 chr3R 24146337 24146408 -3758645 - ROO_I LTR Pao -7528 728 658 5 769 239 173 11 69 chr3R 24146613 24146700 -3758353 - ROO_I LTR Pao -7532 724 643 5 769 195 146 0 0 chr3R 24148254 24148295 -3756758 + (TGG)n Simple_repeat Simple_repeat 3 43 0 5 769 224 316 7 19 chr3R 24150113 24150268 -3754785 + (CTG)n Simple_repeat Simple_repeat 2 154 0 5 769 24 0 0 0 chr3R 24150866 24150890 -3754163 + AT_rich Low_complexity Low_complexity 1 24 0 5 769 355 149 0 60 chr3R 24151233 24151333 -3753720 - ROO_I LTR Pao -7522 734 641 5 769 292 200 11 32 chr3R 24151334 24151427 -3753626 + (TTG)n Simple_repeat Simple_repeat 2 92 0 5 769 240 35 0 0 chr3R 24155036 24155065 -3749988 + (CATA)n Simple_repeat Simple_repeat 4 32 0 5 769 29 0 0 0 chr3R 24157169 24157198 -3747855 + AT_rich Low_complexity Low_complexity 1 29 0 5 769 201 162 0 0 chr3R 24160078 24160115 -3744938 + (TGG)n Simple_repeat Simple_repeat 2 38 0 5 769 24 100 0 0 chr3R 24162458 24162538 -3742515 + AT_rich Low_complexity Low_complexity 1 80 0 5 769 27 73 0 0 chr3R 24165618 24165673 -3739380 + AT_rich Low_complexity Low_complexity 1 55 0 5 769 29 28 0 0 chr3R 24165956 24165992 -3739061 + AT_rich Low_complexity Low_complexity 1 36 0 5 769 270 95 0 0 chr3R 24167773 24167815 -3737238 + (CAA)n Simple_repeat Simple_repeat 3 44 0 5 769 50 0 0 0 chr3R 24171044 24171094 -3733959 + AT_rich Low_complexity Low_complexity 1 50 0 5 769 31 26 0 0 chr3R 24171422 24171460 -3733593 + AT_rich Low_complexity Low_complexity 1 38 0 5 769 22 0 0 0 chr3R 24173657 24173679 -3731374 + AT_rich Low_complexity Low_complexity 1 22 0 5 769 220 260 0 0 chr3R 24174016 24174066 -3730987 + G-rich Low_complexity Low_complexity 3 52 0 5 769 25 31 0 0 chr3R 24174745 24174777 -3730276 + AT_rich Low_complexity Low_complexity 1 32 0 5 769 23 33 0 0 chr3R 24179637 24179667 -3725386 + AT_rich Low_complexity Low_complexity 1 30 0 5 769 249 57 0 0 chr3R 24180663 24180698 -3724355 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 769 180 0 0 0 chr3R 24181721 24181741 -3723312 + (CCTA)n Simple_repeat Simple_repeat 4 23 0 5 769 265 247 26 0 chr3R 24182152 24182229 -3722824 + (CTG)n Simple_repeat Simple_repeat 2 80 0 5 769 192 77 0 0 chr3R 24183217 24183243 -3721810 + (CAAAC)n Simple_repeat Simple_repeat 1 26 0 5 769 33 0 0 0 chr3R 24186773 24186806 -3718247 + AT_rich Low_complexity Low_complexity 1 33 0 5 769 21 0 0 0 chr3R 24187476 24187497 -3717556 + AT_rich Low_complexity Low_complexity 1 21 0 5 769 191 103 26 0 chr3R 24193543 24193582 -3711471 + (CAGGC)n Simple_repeat Simple_repeat 5 44 0 5 769 237 65 0 0 chr3R 24194364 24194395 -3710658 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 769 22 35 0 0 chr3R 24195911 24195940 -3709113 + AT_rich Low_complexity Low_complexity 1 29 0 5 769 201 159 0 0 chr3R 24200357 24200401 -3704652 + A-rich Low_complexity Low_complexity 1 44 0 5 769 310 146 0 24 chr3R 24203240 24203324 -3701729 + (TG)n Simple_repeat Simple_repeat 1 82 0 5 769 228 130 0 0 chr3R 24203855 24203901 -3701152 + (CGAAT)n Simple_repeat Simple_repeat 5 50 0 5 769 201 154 0 0 chr3R 24204502 24204541 -3700512 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 769 22 0 0 0 chr3R 24207213 24207235 -3697818 + AT_rich Low_complexity Low_complexity 1 22 0 5 769 231 125 0 0 chr3R 24207915 24207955 -3697098 + (CAGAC)n Simple_repeat Simple_repeat 4 43 0 5 769 189 107 0 0 chr3R 24208984 24209012 -3696041 + (TTCTG)n Simple_repeat Simple_repeat 3 30 0 5 769 40 59 0 0 chr3R 24211546 24211614 -3693439 + AT_rich Low_complexity Low_complexity 1 68 0 5 769 219 36 0 0 chr3R 24214226 24214254 -3690799 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 769 225 0 0 0 chr3R 24214340 24214365 -3690688 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 5 769 212 143 0 0 chr3R 24217107 24217142 -3687911 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 769 21 0 0 0 chr3R 24222560 24222581 -3682472 + AT_rich Low_complexity Low_complexity 1 21 0 5 769 402 121 0 0 chr3R 24223104 24223170 -3681883 + (GA)n Simple_repeat Simple_repeat 1 66 0 5 769 25 0 0 0 chr3R 24224052 24224077 -3680976 + AT_rich Low_complexity Low_complexity 1 25 0 5 769 204 111 0 0 chr3R 24225721 24225757 -3679296 + (CTG)n Simple_repeat Simple_repeat 3 38 0 5 769 204 205 0 0 chr3R 24227313 24227352 -3677701 + (TCG)n Simple_repeat Simple_repeat 1 39 0 5 769 255 217 0 0 chr3R 24228070 24228130 -3676923 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 769 219 36 0 0 chr3R 24228251 24228279 -3676774 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 769 207 100 0 0 chr3R 24231082 24231112 -3673941 + (CACCAT)n Simple_repeat Simple_repeat 3 32 0 5 769 225 214 18 0 chr3R 24231615 24231671 -3673382 + T-rich Low_complexity Low_complexity 3 59 0 5 769 195 42 0 0 chr3R 24232121 24232145 -3672908 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 769 22 56 0 0 chr3R 24233257 24233293 -3671760 + AT_rich Low_complexity Low_complexity 1 36 0 5 769 180 77 0 0 chr3R 24234972 24234998 -3670055 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 769 234 0 0 0 chr3R 24236082 24236108 -3668945 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 769 276 91 0 0 chr3R 24237279 24237323 -3667730 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 769 248 137 57 38 chr3R 24237813 24237866 -3667187 + (CGAGT)n Simple_repeat Simple_repeat 2 55 0 5 769 180 111 0 0 chr3R 24238856 24238883 -3666170 + (TTTTTA)n Simple_repeat Simple_repeat 6 32 0 5 769 21 0 0 0 chr3R 24239317 24239338 -3665715 + AT_rich Low_complexity Low_complexity 1 21 0 5 769 21 0 0 0 chr3R 24241084 24241105 -3663948 + AT_rich Low_complexity Low_complexity 1 21 0 5 769 203 300 0 0 chr3R 24243039 24243099 -3661954 + CT-rich Low_complexity Low_complexity 2 61 0 5 769 234 143 0 0 chr3R 24245879 24245928 -3659125 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 769 219 139 0 0 chr3R 24246098 24246134 -3658919 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 5 769 23 0 0 0 chr3R 24247762 24247785 -3657268 + AT_rich Low_complexity Low_complexity 1 23 0 5 770 186 143 0 0 chr3R 24250413 24250448 -3654605 + (A)n Simple_repeat Simple_repeat 1 35 0 5 770 183 129 0 0 chr3R 24250799 24250830 -3654223 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 770 210 174 0 0 chr3R 24253104 24253150 -3651903 + (TTCGG)n Simple_repeat Simple_repeat 4 49 0 5 770 27 29 0 0 chr3R 24261660 24261694 -3643359 + AT_rich Low_complexity Low_complexity 1 34 0 5 770 201 39 0 0 chr3R 24267266 24267292 -3637761 + (T)n Simple_repeat Simple_repeat 1 26 0 5 770 214 241 0 0 chr3R 24270235 24270289 -3634764 + (CCCA)n Simple_repeat Simple_repeat 3 56 0 5 770 31 44 0 0 chr3R 24270769 24270814 -3634239 + AT_rich Low_complexity Low_complexity 1 45 0 5 770 285 75 0 0 chr3R 24272012 24272052 -3633001 + (CAGAC)n Simple_repeat Simple_repeat 5 44 0 5 770 242 211 0 17 chr3R 24273429 24273487 -3631566 + (CAG)n Simple_repeat Simple_repeat 3 59 0 5 770 21 0 0 0 chr3R 24274586 24274607 -3630446 + AT_rich Low_complexity Low_complexity 1 21 0 5 770 203 175 0 17 chr3R 24275594 24275652 -3629401 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 770 180 0 0 0 chr3R 24279211 24279231 -3625822 + (TA)n Simple_repeat Simple_repeat 1 20 0 5 770 189 107 0 0 chr3R 24282404 24282432 -3622621 + (TCCG)n Simple_repeat Simple_repeat 1 28 0 5 770 28 71 0 0 chr3R 24283161 24283217 -3621836 + AT_rich Low_complexity Low_complexity 1 56 0 5 770 201 39 0 0 chr3R 24283951 24283977 -3621076 + (CAG)n Simple_repeat Simple_repeat 1 26 0 5 770 25 0 0 0 chr3R 24286308 24286333 -3618720 + AT_rich Low_complexity Low_complexity 1 25 0 5 770 210 139 0 0 chr3R 24287263 24287299 -3617754 + (GTCTG)n Simple_repeat Simple_repeat 5 40 0 5 770 186 43 0 0 chr3R 24290631 24290654 -3614399 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 770 206 319 11 11 chr3R 24292725 24292817 -3612236 + (TG)n Simple_repeat Simple_repeat 1 92 0 5 770 31 26 0 0 chr3R 24294269 24294307 -3610746 + AT_rich Low_complexity Low_complexity 1 38 0 5 770 219 244 13 13 chr3R 24295084 24295163 -3609890 + (TG)n Simple_repeat Simple_repeat 1 79 0 5 770 207 0 0 0 chr3R 24298226 24298249 -3606804 + (TTTAG)n Simple_repeat Simple_repeat 1 23 0 5 770 21 0 0 0 chr3R 24299566 24299587 -3605466 + AT_rich Low_complexity Low_complexity 1 21 0 5 770 204 40 0 0 chr3R 24300799 24300824 -3604229 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 770 21 0 0 0 chr3R 24305226 24305247 -3599806 + AT_rich Low_complexity Low_complexity 1 21 0 5 770 22 0 0 0 chr3R 24309101 24309123 -3595930 + AT_rich Low_complexity Low_complexity 1 22 0 5 770 237 220 0 0 chr3R 24312506 24312556 -3592497 + (GGTTG)n Simple_repeat Simple_repeat 1 50 0 5 770 201 129 0 0 chr3R 24316075 24316106 -3588947 + (CTG)n Simple_repeat Simple_repeat 1 31 0 5 770 211 200 0 0 chr3R 24327207 24327242 -3577811 + (TATG)n Simple_repeat Simple_repeat 3 37 0 5 770 195 42 0 0 chr3R 24327343 24327367 -3577686 + (TTTCG)n Simple_repeat Simple_repeat 3 26 0 5 770 24 0 0 0 chr3R 24327410 24327434 -3577619 + AT_rich Low_complexity Low_complexity 1 24 0 5 770 31 0 0 0 chr3R 24333258 24333289 -3571764 + AT_rich Low_complexity Low_complexity 1 31 0 5 770 228 163 23 0 chr3R 24335033 24335076 -3569977 + GA-rich Low_complexity Low_complexity 1 44 0 5 770 33 0 0 0 chr3R 24336120 24336153 -3568900 + AT_rich Low_complexity Low_complexity 1 33 0 5 770 26 0 0 0 chr3R 24341750 24341776 -3563277 + AT_rich Low_complexity Low_complexity 1 26 0 5 770 24 67 0 0 chr3R 24347210 24347255 -3557798 + AT_rich Low_complexity Low_complexity 1 45 0 5 770 183 42 0 0 chr3R 24360698 24360722 -3544331 + (CTG)n Simple_repeat Simple_repeat 3 26 0 5 770 183 80 0 0 chr3R 24360734 24360759 -3544294 + (ATG)n Simple_repeat Simple_repeat 1 25 0 5 770 348 43 0 0 chr3R 24365733 24365779 -3539274 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 770 245 190 63 0 chr3R 24366089 24366168 -3538885 + (CAG)n Simple_repeat Simple_repeat 2 85 0 5 770 234 91 0 0 chr3R 24366527 24366560 -3538493 + (CGATG)n Simple_repeat Simple_repeat 4 36 0 5 770 208 143 0 0 chr3R 24370610 24370645 -3534408 + (TAAAAA)n Simple_repeat Simple_repeat 3 37 0 5 770 30 27 0 0 chr3R 24370774 24370811 -3534242 + AT_rich Low_complexity Low_complexity 1 37 0 5 770 28 0 0 0 chr3R 24372488 24372516 -3532537 + AT_rich Low_complexity Low_complexity 1 28 0 5 770 294 29 0 0 chr3R 24373178 24373213 -3531840 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 770 270 157 0 0 chr3R 24376412 24376463 -3528590 + (CACCAT)n Simple_repeat Simple_repeat 3 53 0 5 770 186 103 0 0 chr3R 24376805 24376834 -3528219 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 5 771 192 40 0 0 chr3R 24380137 24380162 -3524891 + (CAG)n Simple_repeat Simple_repeat 3 27 0 5 771 21 0 0 0 chr3R 24382241 24382262 -3522791 + AT_rich Low_complexity Low_complexity 1 21 0 5 771 24 32 0 0 chr3R 24383542 24383573 -3521480 + AT_rich Low_complexity Low_complexity 1 31 0 5 771 198 0 0 0 chr3R 24384840 24384862 -3520191 + (CGA)n Simple_repeat Simple_repeat 3 24 0 5 771 22 0 0 0 chr3R 24385264 24385286 -3519767 + AT_rich Low_complexity Low_complexity 1 22 0 5 771 206 105 26 0 chr3R 24385785 24385823 -3519230 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 771 213 39 0 0 chr3R 24387219 24387245 -3517808 + (TGG)n Simple_repeat Simple_repeat 2 27 0 5 771 224 220 0 20 chr3R 24387355 24387406 -3517647 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 771 201 154 0 0 chr3R 24389192 24389231 -3515822 + T-rich Low_complexity Low_complexity 1 39 0 5 771 252 149 0 0 chr3R 24390888 24390935 -3514118 + (CTG)n Simple_repeat Simple_repeat 3 49 0 5 771 290 236 0 14 chr3R 24391867 24391940 -3513113 - ROO_I LTR Pao -7531 725 654 5 771 243 0 0 0 chr3R 24396877 24396904 -3508149 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 771 204 184 0 0 chr3R 24399111 24399160 -3505893 + (CAA)n Simple_repeat Simple_repeat 2 50 0 5 771 223 200 0 16 chr3R 24403007 24403090 -3501963 + (ATGGTG)n Simple_repeat Simple_repeat 1 81 0 5 771 22 35 0 0 chr3R 24403467 24403496 -3501557 + AT_rich Low_complexity Low_complexity 1 29 0 5 771 195 100 0 0 chr3R 24404010 24404040 -3501013 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 5 771 211 211 0 0 chr3R 24405233 24405285 -3499768 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 771 215 316 0 30 chr3R 24406271 24406372 -3498681 + (GGCTG)n Simple_repeat Simple_repeat 4 101 0 5 771 22 0 0 0 chr3R 24406768 24406790 -3498263 + AT_rich Low_complexity Low_complexity 1 22 0 5 771 210 226 0 0 chr3R 24406869 24406922 -3498131 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 771 22 56 0 0 chr3R 24407023 24407059 -3497994 + AT_rich Low_complexity Low_complexity 1 36 0 5 771 281 158 37 0 chr3R 24408387 24408469 -3496584 - ROO_I LTR Pao -7525 731 647 5 771 235 218 0 0 chr3R 24408479 24408534 -3496519 + (CCCGAA)n Simple_repeat Simple_repeat 4 58 0 5 771 465 138 0 0 chr3R 24408598 24408692 -3496361 + (CTG)n Simple_repeat Simple_repeat 3 96 0 5 771 214 158 0 0 chr3R 24410156 24410194 -3494859 + (CCG)n Simple_repeat Simple_repeat 2 39 0 5 771 22 0 0 0 chr3R 24410656 24410678 -3494375 + AT_rich Low_complexity Low_complexity 1 22 0 5 771 290 111 31 62 chr3R 24410822 24410918 -3494135 - ROO_I LTR Pao -7525 731 639 5 771 221 219 0 0 chr3R 24411044 24411085 -3493968 + (CGG)n Simple_repeat Simple_repeat 1 41 0 5 771 252 122 0 0 chr3R 24411623 24411664 -3493389 + (GCTTG)n Simple_repeat Simple_repeat 3 43 0 5 771 269 260 0 0 chr3R 24412110 24412183 -3492870 + (TG)n Simple_repeat Simple_repeat 1 73 0 5 771 22 0 0 0 chr3R 24412797 24412819 -3492234 + AT_rich Low_complexity Low_complexity 1 22 0 5 771 182 108 0 51 chr3R 24412974 24413013 -3492040 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 5 771 21 36 0 0 chr3R 24413426 24413454 -3491599 + AT_rich Low_complexity Low_complexity 1 28 0 5 771 24 0 0 0 chr3R 24413806 24413830 -3491223 + AT_rich Low_complexity Low_complexity 1 24 0 5 771 180 0 0 0 chr3R 24413849 24413869 -3491184 + (A)n Simple_repeat Simple_repeat 1 20 0 5 771 25 31 0 0 chr3R 24415357 24415389 -3489664 + AT_rich Low_complexity Low_complexity 1 32 0 5 771 207 200 0 0 chr3R 24415884 24415924 -3489129 + (TCTA)n Simple_repeat Simple_repeat 1 40 0 5 771 21 0 0 0 chr3R 24417168 24417189 -3487864 + AT_rich Low_complexity Low_complexity 1 21 0 5 771 298 265 0 0 chr3R 24423955 24424038 -3481015 + (CAT)n Simple_repeat Simple_repeat 3 85 0 5 771 21 0 0 0 chr3R 24425353 24425374 -3479679 + AT_rich Low_complexity Low_complexity 1 21 0 5 771 398 191 68 60 chr3R 24425798 24425915 -3479138 - LINEJ1_DM LINE Jockey -30 4990 4873 5 771 183 184 0 0 chr3R 24428799 24428837 -3476216 + (TGG)n Simple_repeat Simple_repeat 2 39 0 5 771 183 42 0 0 chr3R 24430035 24430059 -3474994 + (CAGTG)n Simple_repeat Simple_repeat 1 24 0 5 771 22 35 0 0 chr3R 24434638 24434667 -3470386 + AT_rich Low_complexity Low_complexity 1 29 0 5 771 24 0 0 0 chr3R 24454890 24454914 -3450139 + AT_rich Low_complexity Low_complexity 1 24 0 5 771 218 200 0 0 chr3R 24456775 24456825 -3448228 + T-rich Low_complexity Low_complexity 1 50 0 5 771 215 200 18 18 chr3R 24460236 24460292 -3444761 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 771 360 229 92 81 chr3R 24461780 24461965 -3443088 - DNAREP1_DM LINE Penelope -352 242 56 5 771 21 36 0 0 chr3R 24464595 24464623 -3440430 + AT_rich Low_complexity Low_complexity 1 28 0 5 771 183 80 0 0 chr3R 24466578 24466603 -3438450 + (TAAAAA)n Simple_repeat Simple_repeat 5 29 0 5 771 207 167 0 0 chr3R 24469079 24469121 -3435932 + (GTTTG)n Simple_repeat Simple_repeat 2 43 0 5 771 180 77 0 0 chr3R 24471108 24471134 -3433919 + (TC)n Simple_repeat Simple_repeat 2 27 0 5 771 180 176 0 0 chr3R 24473078 24473112 -3431941 + (CCCGG)n Simple_repeat Simple_repeat 2 35 0 5 771 28 0 0 0 chr3R 24473687 24473715 -3431338 + AT_rich Low_complexity Low_complexity 1 28 0 5 771 210 216 0 0 chr3R 24478916 24478953 -3426100 + (CTCGG)n Simple_repeat Simple_repeat 2 38 0 5 771 207 0 0 0 chr3R 24481582 24481605 -3423448 + (GCTG)n Simple_repeat Simple_repeat 1 23 0 5 771 218 56 28 0 chr3R 24482171 24482207 -3422846 + (TAA)n Simple_repeat Simple_repeat 3 39 0 5 771 23 0 0 0 chr3R 24484781 24484804 -3420249 + AT_rich Low_complexity Low_complexity 1 23 0 5 771 22 35 0 0 chr3R 24487065 24487094 -3417959 + AT_rich Low_complexity Low_complexity 1 29 0 5 771 29 47 0 0 chr3R 24488146 24488189 -3416864 + AT_rich Low_complexity Low_complexity 1 43 0 5 771 213 150 25 0 chr3R 24488626 24488666 -3416387 + (CAGA)n Simple_repeat Simple_repeat 3 43 0 5 771 186 43 0 0 chr3R 24489143 24489166 -3415887 + (AACTG)n Simple_repeat Simple_repeat 4 26 0 5 771 282 125 0 0 chr3R 24489920 24489968 -3415085 + (CTG)n Simple_repeat Simple_repeat 3 50 0 5 771 195 42 0 0 chr3R 24490893 24490917 -3414136 + (TTA)n Simple_repeat Simple_repeat 3 26 0 5 771 241 213 16 16 chr3R 24491522 24491584 -3413469 + A-rich Low_complexity Low_complexity 1 62 0 5 771 21 36 0 0 chr3R 24493867 24493895 -3411158 + AT_rich Low_complexity Low_complexity 1 28 0 5 771 27 29 0 0 chr3R 24498259 24498293 -3406760 + AT_rich Low_complexity Low_complexity 1 34 0 5 771 23 0 0 0 chr3R 24500310 24500333 -3404720 + AT_rich Low_complexity Low_complexity 1 23 0 5 771 212 171 0 0 chr3R 24508521 24508562 -3396491 + (CAT)n Simple_repeat Simple_repeat 1 41 0 5 772 30 0 0 0 chr3R 24515831 24515861 -3389192 + AT_rich Low_complexity Low_complexity 1 30 0 5 772 37 0 0 0 chr3R 24518501 24518538 -3386515 + AT_rich Low_complexity Low_complexity 1 37 0 5 772 25 31 0 0 chr3R 24519640 24519672 -3385381 + AT_rich Low_complexity Low_complexity 1 32 0 5 772 186 71 0 0 chr3R 24526614 24526642 -3378411 + (CAG)n Simple_repeat Simple_repeat 2 29 0 5 772 201 147 0 0 chr3R 24526878 24526912 -3378141 + (CGGA)n Simple_repeat Simple_repeat 3 36 0 5 772 285 98 0 0 chr3R 24527302 24527343 -3377710 + (ATG)n Simple_repeat Simple_repeat 3 43 0 5 772 25 0 0 0 chr3R 24528454 24528479 -3376574 + AT_rich Low_complexity Low_complexity 1 25 0 5 772 200 193 53 0 chr3R 24529140 24529197 -3375856 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 772 195 162 0 0 chr3R 24529309 24529346 -3375707 + (TTG)n Simple_repeat Simple_repeat 2 38 0 5 772 221 191 0 21 chr3R 24530785 24530833 -3374220 + (CAA)n Simple_repeat Simple_repeat 2 48 0 5 772 186 133 0 0 chr3R 24531041 24531071 -3373982 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 772 243 133 0 0 chr3R 24534318 24534363 -3370690 + (CAG)n Simple_repeat Simple_repeat 1 45 0 5 772 36 0 0 0 chr3R 24535693 24535729 -3369324 + AT_rich Low_complexity Low_complexity 1 36 0 5 772 21 71 0 0 chr3R 24538058 24538100 -3366953 + AT_rich Low_complexity Low_complexity 1 42 0 5 772 21 0 0 0 chr3R 24539144 24539165 -3365888 + AT_rich Low_complexity Low_complexity 1 21 0 5 772 285 75 0 0 chr3R 24542932 24542972 -3362081 + (TCCG)n Simple_repeat Simple_repeat 4 43 0 5 772 289 159 14 14 chr3R 24543042 24543112 -3361941 - ROO_I LTR Pao -7530 726 657 5 772 218 122 24 0 chr3R 24548491 24548532 -3356521 + (TTGG)n Simple_repeat Simple_repeat 1 42 0 5 772 220 191 0 0 chr3R 24549828 24549870 -3355183 + (TTCGGG)n Simple_repeat Simple_repeat 2 43 0 5 772 238 264 0 0 chr3R 24559117 24559170 -3345883 + (CAG)n Simple_repeat Simple_repeat 3 55 0 5 772 207 105 0 73 chr3R 24559334 24559375 -3345678 + (CGATA)n Simple_repeat Simple_repeat 2 39 0 5 772 21 0 0 0 chr3R 24564803 24564824 -3340229 + AT_rich Low_complexity Low_complexity 1 21 0 5 772 23 33 0 0 chr3R 24565963 24565993 -3339060 + AT_rich Low_complexity Low_complexity 1 30 0 5 772 3961 7 0 0 chr3R 24584062 24584490 -3320563 + ROO_LTR LTR Pao 1 428 0 5 772 31148 1 0 0 chr3R 24584509 24587949 -3317104 + ROO_I LTR Pao 1757 5196 -3060 5 772 11302 4 9 0 chr3R 24587936 24589193 -3315860 + ROO_I LTR Pao 6988 8256 0 5 772 3961 7 0 0 chr3R 24589193 24589621 -3315432 + ROO_LTR LTR Pao 1 428 0 5 772 3696 0 0 2 chr3R 24589691 24590094 -3314959 - STALKER4_LTR LTR Gypsy 0 402 1 5 772 57898 9 0 4 chr3R 24590094 24596647 -3308406 - STALKER4_I LTR Gypsy 0 6530 1 5 772 3696 0 0 2 chr3R 24596647 24597050 -3308003 - STALKER4_LTR LTR Gypsy 0 402 1 5 772 255 61 0 0 chr3R 24599125 24599158 -3305895 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 772 212 86 0 28 chr3R 24601538 24601574 -3303479 + (CTG)n Simple_repeat Simple_repeat 1 35 0 5 772 210 91 0 0 chr3R 24601621 24601654 -3303399 + (TCCCG)n Simple_repeat Simple_repeat 2 34 0 5 772 211 220 0 0 chr3R 24601803 24601853 -3303200 + (GTTTG)n Simple_repeat Simple_repeat 3 52 0 5 772 21 0 0 0 chr3R 24602463 24602484 -3302569 + AT_rich Low_complexity Low_complexity 1 21 0 5 772 218 32 32 0 chr3R 24603194 24603225 -3301828 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 5 772 216 97 0 0 chr3R 24603834 24603865 -3301188 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 772 219 173 0 0 chr3R 24604455 24604507 -3300546 + A-rich Low_complexity Low_complexity 1 52 0 5 772 219 217 0 0 chr3R 24605851 24605911 -3299142 + T-rich Low_complexity Low_complexity 1 60 0 5 772 182 160 0 20 chr3R 24606404 24606455 -3298598 + (CATCC)n Simple_repeat Simple_repeat 1 50 0 5 772 279 0 0 0 chr3R 24610711 24610742 -3294311 + (TCCA)n Simple_repeat Simple_repeat 1 31 0 5 772 240 186 0 0 chr3R 24612720 24612779 -3292274 + (ATG)n Simple_repeat Simple_repeat 1 59 0 5 772 25 0 0 0 chr3R 24613770 24613795 -3291258 + AT_rich Low_complexity Low_complexity 1 25 0 5 772 46619 5 0 1 chr3R 24618647 24623662 -3281391 + LINEJ1_DM LINE Jockey 12 5020 0 5 772 189 0 0 0 chr3R 24623662 24623683 -3281370 + (A)n Simple_repeat Simple_repeat 1 21 0 5 772 207 269 0 0 chr3R 24624587 24624639 -3280414 + GA-rich Low_complexity Low_complexity 4 55 0 5 772 198 71 0 0 chr3R 24629295 24629323 -3275730 + (TCTG)n Simple_repeat Simple_repeat 2 29 0 5 772 30 27 0 0 chr3R 24634419 24634456 -3270597 + AT_rich Low_complexity Low_complexity 1 37 0 5 772 201 121 0 0 chr3R 24635151 24635184 -3269869 + (CTG)n Simple_repeat Simple_repeat 3 35 0 5 772 22 0 0 0 chr3R 24637502 24637524 -3267529 + AT_rich Low_complexity Low_complexity 1 22 0 5 772 258 214 0 0 chr3R 24639350 24639434 -3265619 + GA-rich Low_complexity Low_complexity 5 88 0 5 772 197 128 0 21 chr3R 24641381 24641429 -3263624 + (GGAGAA)n Simple_repeat Simple_repeat 2 48 0 5 773 268 238 24 0 chr3R 24643618 24643702 -3261351 - ROO_I LTR Pao -7524 732 647 5 773 29 60 0 0 chr3R 24645731 24645781 -3259272 + AT_rich Low_complexity Low_complexity 1 50 0 5 773 22 0 0 0 chr3R 24646458 24646480 -3258573 + AT_rich Low_complexity Low_complexity 1 22 0 5 773 253 232 0 0 chr3R 24651619 24651675 -3253378 + (TGG)n Simple_repeat Simple_repeat 2 57 0 5 773 198 103 0 0 chr3R 24654032 24654061 -3250992 + (CACAG)n Simple_repeat Simple_repeat 1 29 0 5 773 189 237 0 0 chr3R 24661163 24661222 -3243831 + (TTG)n Simple_repeat Simple_repeat 1 59 0 5 773 195 42 0 0 chr3R 24661788 24661812 -3243241 + (ATG)n Simple_repeat Simple_repeat 1 24 0 5 773 24 32 0 0 chr3R 24670681 24670712 -3234341 + AT_rich Low_complexity Low_complexity 1 31 0 5 773 22 35 0 0 chr3R 24672473 24672502 -3232551 + AT_rich Low_complexity Low_complexity 1 29 0 5 773 294 95 0 0 chr3R 24672794 24672836 -3232217 + (TAAAA)n Simple_repeat Simple_repeat 4 45 0 5 773 234 0 0 0 chr3R 24674597 24674623 -3230430 + (TGGA)n Simple_repeat Simple_repeat 2 27 0 5 773 186 43 0 0 chr3R 24676196 24676219 -3228834 + (TTCCG)n Simple_repeat Simple_repeat 2 24 0 5 773 27 73 0 0 chr3R 24676833 24676888 -3228165 + AT_rich Low_complexity Low_complexity 1 55 0 5 773 313 205 11 33 chr3R 24677219 24677310 -3227743 + ROO_I LTR Pao 646 734 -7522 5 773 202 204 0 0 chr3R 24677540 24677584 -3227469 + (CCA)n Simple_repeat Simple_repeat 2 45 0 5 773 21 36 0 0 chr3R 24677895 24677923 -3227130 + AT_rich Low_complexity Low_complexity 1 28 0 5 773 23 78 0 0 chr3R 24679836 24679887 -3225166 + AT_rich Low_complexity Low_complexity 1 51 0 5 773 183 156 0 0 chr3R 24681931 24681963 -3223090 + (CGGA)n Simple_repeat Simple_repeat 2 33 0 5 773 303 104 0 0 chr3R 24687176 24687224 -3217829 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 773 44 0 0 0 chr3R 24695568 24695612 -3209441 + AT_rich Low_complexity Low_complexity 1 44 0 5 773 21 36 0 0 chr3R 24695935 24695963 -3209090 + AT_rich Low_complexity Low_complexity 1 28 0 5 773 228 238 0 16 chr3R 24712147 24712211 -3192842 + (CTG)n Simple_repeat Simple_repeat 1 63 0 5 773 207 156 0 0 chr3R 24712601 24712633 -3192420 + (CGG)n Simple_repeat Simple_repeat 1 32 0 5 773 211 295 12 25 chr3R 24714925 24715005 -3190048 + (CAG)n Simple_repeat Simple_repeat 2 80 0 5 773 282 208 0 0 chr3R 24715207 24715260 -3189793 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 773 311 296 0 20 chr3R 24719217 24719317 -3185736 + (CAG)n Simple_repeat Simple_repeat 3 100 0 5 773 242 164 18 18 chr3R 24720971 24721027 -3184026 + T-rich Low_complexity Low_complexity 5 60 0 5 773 23 33 0 0 chr3R 24723742 24723772 -3181281 + AT_rich Low_complexity Low_complexity 1 30 0 5 773 206 62 31 0 chr3R 24729404 24729436 -3175617 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 773 224 244 0 35 chr3R 24731866 24731951 -3173102 + GA-rich Low_complexity Low_complexity 3 84 0 5 773 225 0 0 0 chr3R 24735765 24735790 -3169263 + (CAG)n Simple_repeat Simple_repeat 2 26 0 5 773 265 240 0 0 chr3R 24735944 24736019 -3169034 + ROO_I LTR Pao 652 726 -7530 5 773 254 196 20 0 chr3R 24736391 24736442 -3168611 + TART_B1 LINE telomeric 144 195 -10459 5 773 258 97 0 88 chr3R 24736401 24736469 -3168584 + ROO_I LTR Pao 653 714 -7542 5 773 229 190 138 12 chr3R 24736741 24736821 -3168232 + ROO_I LTR Pao 690 779 -7477 5 773 216 184 0 0 chr3R 24738710 24738748 -3166305 + (CAG)n Simple_repeat Simple_repeat 1 38 0 5 773 23 0 0 0 chr3R 24738919 24738942 -3166111 + AT_rich Low_complexity Low_complexity 1 23 0 5 773 207 156 0 0 chr3R 24740390 24740422 -3164631 + (CCG)n Simple_repeat Simple_repeat 3 34 0 5 773 234 301 0 47 chr3R 24742998 24743127 -3161926 + (CAG)n Simple_repeat Simple_repeat 2 124 0 5 773 180 135 0 0 chr3R 24743346 24743383 -3161670 + (CCA)n Simple_repeat Simple_repeat 2 38 0 5 773 22 0 0 0 chr3R 24744426 24744448 -3160605 + AT_rich Low_complexity Low_complexity 1 22 0 5 773 226 140 11 85 chr3R 24744603 24744697 -3160356 + (ATG)n Simple_repeat Simple_repeat 1 87 0 5 773 245 213 0 0 chr3R 24744861 24744908 -3160145 + T-rich Low_complexity Low_complexity 1 47 0 5 773 26 50 0 0 chr3R 24748375 24748415 -3156638 + AT_rich Low_complexity Low_complexity 1 40 0 5 773 21 36 0 0 chr3R 24750770 24750798 -3154255 + AT_rich Low_complexity Low_complexity 1 28 0 5 773 23 33 0 0 chr3R 24751391 24751421 -3153632 + AT_rich Low_complexity Low_complexity 1 30 0 5 773 294 200 59 20 chr3R 24753499 24753601 -3151452 - ROO_I LTR Pao -7513 743 638 5 773 189 209 11 34 chr3R 24756346 24756435 -3148618 + (CAA)n Simple_repeat Simple_repeat 3 89 0 5 773 25 0 0 0 chr3R 24756666 24756691 -3148362 + AT_rich Low_complexity Low_complexity 1 25 0 5 773 203 266 16 0 chr3R 24757600 24757664 -3147389 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 773 216 0 0 0 chr3R 24758794 24758818 -3146235 + (A)n Simple_repeat Simple_repeat 1 24 0 5 773 231 36 0 0 chr3R 24760683 24760711 -3144342 + (ATATG)n Simple_repeat Simple_repeat 2 29 0 5 773 202 276 0 0 chr3R 24761012 24761070 -3143983 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 773 229 229 0 0 chr3R 24761160 24761208 -3143845 + A-rich Low_complexity Low_complexity 1 48 0 5 773 27 29 0 0 chr3R 24762415 24762449 -3142604 + AT_rich Low_complexity Low_complexity 1 34 0 5 773 180 77 0 0 chr3R 24762757 24762783 -3142270 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 773 212 158 0 0 chr3R 24766255 24766293 -3138760 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 773 215 276 0 0 chr3R 24766822 24766880 -3138173 + (CAGT)n Simple_repeat Simple_repeat 1 58 0 5 773 21 0 0 0 chr3R 24767246 24767267 -3137786 + AT_rich Low_complexity Low_complexity 1 21 0 5 773 243 0 0 0 chr3R 24768029 24768056 -3136997 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 773 288 137 0 0 chr3R 24768592 24768643 -3136410 + (CAGTT)n Simple_repeat Simple_repeat 1 51 0 5 773 198 0 0 0 chr3R 24768899 24768921 -3136132 + (T)n Simple_repeat Simple_repeat 1 22 0 5 773 251 261 0 0 chr3R 24769744 24769809 -3135244 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 773 246 62 0 0 chr3R 24770733 24770765 -3134288 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 773 237 65 0 0 chr3R 24771163 24771194 -3133859 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 773 219 250 0 0 chr3R 24771997 24772041 -3133012 + (CAA)n Simple_repeat Simple_repeat 2 45 0 5 773 230 189 0 19 chr3R 24772243 24772297 -3132756 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 774 29 78 0 0 chr3R 24772702 24772766 -3132287 + AT_rich Low_complexity Low_complexity 1 64 0 5 774 228 77 0 55 chr3R 24773938 24773993 -3131060 + (GTTTG)n Simple_repeat Simple_repeat 2 53 0 5 774 222 37 0 0 chr3R 24774096 24774123 -3130930 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 774 248 120 20 0 chr3R 24775189 24775239 -3129814 + (CAAAC)n Simple_repeat Simple_repeat 5 55 0 5 774 288 313 30 7 chr3R 24775610 24775745 -3129308 + (CAG)n Simple_repeat Simple_repeat 2 139 0 5 774 214 262 12 24 chr3R 24776828 24776910 -3128143 + G-rich Low_complexity Low_complexity 4 84 0 5 774 238 200 0 0 chr3R 24777724 24777779 -3127274 + A-rich Low_complexity Low_complexity 3 57 0 5 774 221 175 0 0 chr3R 24778191 24778231 -3126822 + (AAGTG)n Simple_repeat Simple_repeat 3 42 0 5 774 231 227 0 0 chr3R 24782606 24782672 -3122381 + (CCGAA)n Simple_repeat Simple_repeat 1 66 0 5 774 22 0 0 0 chr3R 24784949 24784971 -3120082 + AT_rich Low_complexity Low_complexity 1 22 0 5 774 23 0 0 0 chr3R 24785912 24785935 -3119118 + AT_rich Low_complexity Low_complexity 1 23 0 5 774 207 0 0 0 chr3R 24787008 24787031 -3118022 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 774 372 111 0 0 chr3R 24787404 24787467 -3117586 + (ACTG)n Simple_repeat Simple_repeat 4 66 0 5 774 247 288 0 0 chr3R 24788871 24788944 -3116109 + (CCCCAA)n Simple_repeat Simple_repeat 3 75 0 5 774 213 39 0 0 chr3R 24791303 24791329 -3113724 + (CTTTG)n Simple_repeat Simple_repeat 3 28 0 5 774 207 0 0 0 chr3R 24793359 24793382 -3111671 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 774 303 85 0 0 chr3R 24796340 24796387 -3108666 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 774 180 77 0 0 chr3R 24798001 24798027 -3107026 + (CTG)n Simple_repeat Simple_repeat 3 28 0 5 774 240 35 0 0 chr3R 24800308 24800337 -3104716 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 5 774 324 0 0 0 chr3R 24803072 24803108 -3101945 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 774 225 94 0 0 chr3R 24803223 24803255 -3101798 + (CCGAA)n Simple_repeat Simple_repeat 3 34 0 5 774 227 192 0 19 chr3R 24804715 24804768 -3100285 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 774 24 0 0 0 chr3R 24805130 24805154 -3099899 + AT_rich Low_complexity Low_complexity 1 24 0 5 774 195 42 0 0 chr3R 24808912 24808936 -3096117 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 5 774 212 294 0 0 chr3R 24809105 24809173 -3095880 + T-rich Low_complexity Low_complexity 2 69 0 5 774 21 0 0 0 chr3R 24809425 24809446 -3095607 + AT_rich Low_complexity Low_complexity 1 21 0 5 774 23 0 0 0 chr3R 24810831 24810854 -3094199 + AT_rich Low_complexity Low_complexity 1 23 0 5 774 217 215 0 44 chr3R 24811879 24811947 -3093106 + (TTG)n Simple_repeat Simple_repeat 2 66 0 5 774 225 128 0 0 chr3R 24812039 24812086 -3092967 + (TCCC)n Simple_repeat Simple_repeat 4 50 0 5 774 225 139 0 0 chr3R 24812758 24812801 -3092252 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 774 23 0 0 0 chr3R 24813165 24813188 -3091865 + AT_rich Low_complexity Low_complexity 1 23 0 5 774 225 0 0 0 chr3R 24814381 24814406 -3090647 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 774 217 229 0 0 chr3R 24815084 24815132 -3089921 + (ATTCG)n Simple_repeat Simple_repeat 4 51 0 5 774 180 143 0 0 chr3R 24815300 24815342 -3089711 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 774 22 0 0 0 chr3R 24815393 24815415 -3089638 + AT_rich Low_complexity Low_complexity 1 22 0 5 774 21 57 0 0 chr3R 24816230 24816265 -3088788 + AT_rich Low_complexity Low_complexity 1 35 0 5 774 204 277 15 0 chr3R 24816374 24816439 -3088614 + (CAG)n Simple_repeat Simple_repeat 3 68 0 5 774 302 197 40 0 chr3R 24817095 24817171 -3087882 + ROO_I LTR Pao 665 743 -7513 5 774 24 0 0 0 chr3R 24817953 24817977 -3087076 + AT_rich Low_complexity Low_complexity 1 24 0 5 774 21 0 0 0 chr3R 24820001 24820022 -3085031 + AT_rich Low_complexity Low_complexity 1 21 0 5 774 270 125 0 0 chr3R 24821496 24821544 -3083509 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 774 22 0 0 0 chr3R 24823320 24823342 -3081711 + AT_rich Low_complexity Low_complexity 1 22 0 5 774 25 31 0 0 chr3R 24824175 24824207 -3080846 + AT_rich Low_complexity Low_complexity 1 32 0 5 774 234 62 0 0 chr3R 24825647 24825679 -3079374 + (A)n Simple_repeat Simple_repeat 1 32 0 5 774 237 163 0 0 chr3R 24825766 24825815 -3079238 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 5 774 189 121 0 0 chr3R 24826605 24826638 -3078415 + (TTG)n Simple_repeat Simple_repeat 1 33 0 5 774 201 154 0 0 chr3R 24826663 24826702 -3078351 + (CAA)n Simple_repeat Simple_repeat 2 40 0 5 774 242 148 0 18 chr3R 24826845 24826900 -3078153 + (CAA)n Simple_repeat Simple_repeat 1 54 0 5 774 28 0 0 0 chr3R 24830236 24830264 -3074789 + AT_rich Low_complexity Low_complexity 1 28 0 5 774 21 0 0 0 chr3R 24830776 24830797 -3074256 + AT_rich Low_complexity Low_complexity 1 21 0 5 774 269 247 0 22 chr3R 24832617 24832708 -3072345 + (TATATG)n Simple_repeat Simple_repeat 3 91 0 5 774 318 98 0 0 chr3R 24834317 24834368 -3070685 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 5 774 183 129 0 0 chr3R 24835065 24835096 -3069957 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 774 22 0 0 0 chr3R 24835675 24835697 -3069356 + AT_rich Low_complexity Low_complexity 1 22 0 5 774 219 114 0 0 chr3R 24836132 24836167 -3068886 + (TTAG)n Simple_repeat Simple_repeat 4 38 0 5 774 180 111 0 0 chr3R 24836311 24836338 -3068715 + (CACCAT)n Simple_repeat Simple_repeat 1 27 0 5 774 216 0 0 0 chr3R 24839059 24839083 -3065970 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 5 774 270 0 0 0 chr3R 24840097 24840127 -3064926 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 774 201 39 0 0 chr3R 24842429 24842455 -3062598 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 774 210 154 26 0 chr3R 24843946 24843985 -3061068 + (CATCC)n Simple_repeat Simple_repeat 2 41 0 5 774 2798 97 39 0 chr3R 24851170 24851612 -3053441 + S_DM DNA Tc1 1 459 -1277 5 774 27 29 0 0 chr3R 24856662 24856696 -3048357 + AT_rich Low_complexity Low_complexity 1 34 0 5 774 189 180 0 0 chr3R 24863011 24863061 -3041992 + CT-rich Low_complexity Low_complexity 3 52 0 5 774 239 276 17 0 chr3R 24865097 24865155 -3039898 + (CGTG)n Simple_repeat Simple_repeat 4 62 0 5 774 213 132 0 0 chr3R 24868124 24868162 -3036891 + (ATTCG)n Simple_repeat Simple_repeat 2 39 0 5 774 213 178 0 0 chr3R 24872342 24872387 -3032666 + A-rich Low_complexity Low_complexity 1 45 0 5 774 266 47 0 44 chr3R 24872747 24872792 -3032261 + (CAAAAA)n Simple_repeat Simple_repeat 5 47 0 5 774 239 93 0 23 chr3R 24872989 24873033 -3032020 + (TA)n Simple_repeat Simple_repeat 2 44 0 5 774 24 32 0 0 chr3R 24879990 24880021 -3025032 + AT_rich Low_complexity Low_complexity 1 31 0 5 774 21 0 0 0 chr3R 24880400 24880421 -3024632 + AT_rich Low_complexity Low_complexity 1 21 0 5 774 35 41 0 0 chr3R 24881504 24881553 -3023500 + AT_rich Low_complexity Low_complexity 1 49 0 5 774 213 94 0 0 chr3R 24889778 24889810 -3015243 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 774 21 36 0 0 chr3R 24892720 24892748 -3012305 + AT_rich Low_complexity Low_complexity 1 28 0 5 774 270 95 0 0 chr3R 24895026 24895068 -3009985 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 774 203 234 0 0 chr3R 24895387 24895434 -3009619 + (TCG)n Simple_repeat Simple_repeat 2 48 0 5 774 200 200 15 0 chr3R 24895623 24895688 -3009365 + GA-rich Low_complexity Low_complexity 2 67 0 5 774 234 0 0 0 chr3R 24903303 24903329 -3001724 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 775 6239 16 115 1 chr3R 24905160 24905967 -2999086 + FB4_DM DNA Tc1 1 899 -3190 5 775 4311 18 0 0 chr3R 24905967 24906470 -2998583 - FB4_DM DNA Tc1 -3586 503 1 5 775 279 0 0 0 chr3R 24908586 24908617 -2996436 + (TTG)n Simple_repeat Simple_repeat 1 31 0 5 775 208 28 54 27 chr3R 24908726 24908763 -2996290 + (CAGC)n Simple_repeat Simple_repeat 1 38 0 5 775 206 95 24 0 chr3R 24915244 24915286 -2989767 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 775 212 175 0 0 chr3R 24917904 24917944 -2987109 + (ATG)n Simple_repeat Simple_repeat 1 40 0 5 775 227 114 23 0 chr3R 24920353 24920397 -2984656 + (TCCA)n Simple_repeat Simple_repeat 4 48 0 5 775 189 107 0 0 chr3R 24923709 24923737 -2981316 + (CAG)n Simple_repeat Simple_repeat 1 28 0 5 775 219 36 0 0 chr3R 24923921 24923949 -2981104 + (CAG)n Simple_repeat Simple_repeat 3 30 0 5 775 198 91 0 0 chr3R 24924093 24924126 -2980927 + (CAG)n Simple_repeat Simple_repeat 1 33 0 5 775 241 64 0 60 chr3R 24924195 24924245 -2980808 + (CAG)n Simple_repeat Simple_repeat 1 47 0 5 775 198 103 0 0 chr3R 24924420 24924449 -2980604 + (CAA)n Simple_repeat Simple_repeat 1 29 0 5 775 300 158 35 35 chr3R 24925244 24925329 -2979724 + ROO_I LTR Pao 643 727 -7529 5 775 183 167 0 0 chr3R 24928508 24928550 -2976503 + (CAG)n Simple_repeat Simple_repeat 1 42 0 5 775 206 200 0 0 chr3R 24928904 24928939 -2976114 + (CAG)n Simple_repeat Simple_repeat 1 35 0 5 775 280 242 16 24 chr3R 24929085 24929208 -2975845 + ROO_I LTR Pao 636 757 -7499 5 775 240 122 0 0 chr3R 24929378 24929419 -2975634 + (CAG)n Simple_repeat Simple_repeat 1 41 0 5 775 202 300 12 12 chr3R 24931397 24931478 -2973575 + (CAG)n Simple_repeat Simple_repeat 3 83 0 5 775 213 195 0 0 chr3R 24931779 24931820 -2973233 + (CAG)n Simple_repeat Simple_repeat 1 41 0 5 775 198 227 0 0 chr3R 24931848 24931923 -2973130 + (CAG)n Simple_repeat Simple_repeat 1 75 0 5 775 201 302 0 10 chr3R 24932225 24932322 -2972731 + (CAG)n Simple_repeat Simple_repeat 1 96 0 5 775 234 62 0 0 chr3R 24933306 24933338 -2971715 + (CCAA)n Simple_repeat Simple_repeat 2 33 0 5 775 21 0 0 0 chr3R 24933504 24933525 -2971528 + AT_rich Low_complexity Low_complexity 1 21 0 5 775 23 105 0 0 chr3R 24938581 24938667 -2966386 + AT_rich Low_complexity Low_complexity 1 86 0 5 775 23 0 0 0 chr3R 24944105 24944128 -2960925 + AT_rich Low_complexity Low_complexity 1 23 0 5 775 297 314 0 0 chr3R 24947047 24947149 -2957904 + (TCG)n Simple_repeat Simple_repeat 2 103 0 5 775 22 0 0 0 chr3R 24953634 24953656 -2951397 + AT_rich Low_complexity Low_complexity 1 22 0 5 775 203 183 16 62 chr3R 24953973 24954037 -2951016 + T-rich Low_complexity Low_complexity 6 66 0 5 775 21 0 0 0 chr3R 24958631 24958652 -2946401 + AT_rich Low_complexity Low_complexity 1 21 0 5 775 312 91 0 0 chr3R 24958863 24958907 -2946146 + (CCAA)n Simple_repeat Simple_repeat 1 44 0 5 775 183 80 0 0 chr3R 24959419 24959444 -2945609 + (CAATC)n Simple_repeat Simple_repeat 2 26 0 5 775 231 36 0 0 chr3R 24960493 24960521 -2944532 + (CCTCG)n Simple_repeat Simple_repeat 2 29 0 5 775 318 67 0 0 chr3R 24965666 24965711 -2939342 + (TTTTTG)n Simple_repeat Simple_repeat 3 47 0 5 775 21 0 0 0 chr3R 24975597 24975618 -2929435 + AT_rich Low_complexity Low_complexity 1 21 0 5 775 250 227 0 26 chr3R 24982470 24982583 -2922470 + GA-rich Low_complexity Low_complexity 3 112 0 5 775 357 47 0 0 chr3R 24992768 24992811 -2912242 - ARS406_DM Unknown Unknown 0 353 311 5 775 205 186 0 0 chr3R 24998962 24999005 -2906048 + T-rich Low_complexity Low_complexity 1 43 0 5 775 261 109 0 0 chr3R 25000834 25000880 -2904173 + (TGG)n Simple_repeat Simple_repeat 3 48 0 5 775 202 195 0 0 chr3R 25000914 25000955 -2904098 + G-rich Low_complexity Low_complexity 1 41 0 5 775 255 229 14 0 chr3R 25001152 25001222 -2903831 + T-rich Low_complexity Low_complexity 2 72 0 5 775 234 191 0 0 chr3R 25002002 25002049 -2903004 + (ACTG)n Simple_repeat Simple_repeat 4 50 0 5 775 209 217 0 0 chr3R 25004785 25004831 -2900222 + T-rich Low_complexity Low_complexity 1 46 0 5 775 315 85 0 0 chr3R 25007225 25007272 -2897781 + (CTG)n Simple_repeat Simple_repeat 1 47 0 5 775 207 184 0 0 chr3R 25009387 25009425 -2895628 + (GTGTG)n Simple_repeat Simple_repeat 4 41 0 5 775 207 152 0 0 chr3R 25010320 25010366 -2894687 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 775 254 312 29 17 chr3R 25010677 25010738 -2894315 + XDMR_DM Unknown Unknown 181 354 -5 5 775 337 174 60 40 chr3R 25010738 25010849 -2894204 - SAR_DM Satellite Satellite -1027 445 346 5 775 249 108 143 39 chr3R 25011072 25011149 -2893904 - SAR_DM Satellite Satellite -1053 419 335 5 775 349 100 34 101 chr3R 25011369 25011458 -2893595 - SAR_DM Satellite Satellite -1056 416 334 5 775 242 298 46 31 chr3R 25011553 25011747 -2893306 + XDMR Unknown Unknown 165 361 0 5 775 349 100 34 101 chr3R 25011678 25011767 -2893286 - SAR_DM Satellite Satellite -1056 416 334 5 775 242 298 46 31 chr3R 25011862 25012056 -2892997 + XDMR Unknown Unknown 165 361 0 5 775 349 100 34 101 chr3R 25011987 25012076 -2892977 - SAR_DM Satellite Satellite -1056 416 334 5 775 359 190 73 117 chr3R 25012296 25012475 -2892578 - SAR_DM Satellite Satellite -693 779 618 5 775 192 40 0 0 chr3R 25017324 25017349 -2887704 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 775 238 211 0 0 chr3R 25019135 25019187 -2885866 + (GTTTG)n Simple_repeat Simple_repeat 4 55 0 5 775 180 158 0 0 chr3R 25020299 25020337 -2884716 + T-rich Low_complexity Low_complexity 1 38 0 5 775 257 220 0 0 chr3R 25020515 25020574 -2884479 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 775 32 43 0 0 chr3R 25021098 25021144 -2883909 + AT_rich Low_complexity Low_complexity 1 46 0 5 775 32 95 0 0 chr3R 25021211 25021306 -2883747 + AT_rich Low_complexity Low_complexity 1 95 0 5 775 21 0 0 0 chr3R 25021895 25021916 -2883137 + AT_rich Low_complexity Low_complexity 1 21 0 5 775 201 147 0 0 chr3R 25025849 25025883 -2879170 + (TATG)n Simple_repeat Simple_repeat 3 36 0 5 775 37 0 0 0 chr3R 25029600 25029637 -2875416 + AT_rich Low_complexity Low_complexity 1 37 0 5 775 189 0 0 0 chr3R 25030975 25030996 -2874057 + (TTG)n Simple_repeat Simple_repeat 2 22 0 5 775 242 216 0 0 chr3R 25031753 25031804 -2873249 + (CAT)n Simple_repeat Simple_repeat 1 51 0 5 775 231 227 15 15 chr3R 25032609 25032676 -2872377 + (TG)n Simple_repeat Simple_repeat 2 68 0 5 775 216 111 0 0 chr3R 25032988 25033024 -2872029 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 775 28 0 0 0 chr3R 25033139 25033167 -2871886 + AT_rich Low_complexity Low_complexity 1 28 0 5 776 204 258 30 0 chr3R 25035295 25035361 -2869692 + (CAAAG)n Simple_repeat Simple_repeat 4 71 0 5 776 192 77 0 0 chr3R 25035797 25035823 -2869230 + (GCTTG)n Simple_repeat Simple_repeat 3 28 0 5 776 192 179 0 0 chr3R 25035984 25036023 -2869030 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 776 213 65 0 0 chr3R 25036551 25036582 -2868471 + (T)n Simple_repeat Simple_repeat 1 31 0 5 776 202 195 0 0 chr3R 25037246 25037287 -2867766 + CT-rich Low_complexity Low_complexity 1 41 0 5 776 25 0 0 0 chr3R 25039892 25039917 -2865136 + AT_rich Low_complexity Low_complexity 1 25 0 5 776 263 146 0 18 chr3R 25044533 25044589 -2860464 + (CAG)n Simple_repeat Simple_repeat 2 56 0 5 776 235 310 0 0 chr3R 25044880 25044938 -2860115 + (CTGGGG)n Simple_repeat Simple_repeat 1 58 0 5 776 23 54 0 0 chr3R 25045363 25045400 -2859653 + AT_rich Low_complexity Low_complexity 1 37 0 5 776 22 0 0 0 chr3R 25047795 25047817 -2857236 + AT_rich Low_complexity Low_complexity 1 22 0 5 776 24 32 0 0 chr3R 25052748 25052779 -2852274 + AT_rich Low_complexity Low_complexity 1 31 0 5 776 23 68 0 0 chr3R 25054624 25054668 -2850385 + AT_rich Low_complexity Low_complexity 1 44 0 5 776 198 191 0 0 chr3R 25055117 25055164 -2849889 + (CGTG)n Simple_repeat Simple_repeat 1 47 0 5 776 24 53 0 0 chr3R 25060620 25060658 -2844395 + AT_rich Low_complexity Low_complexity 1 38 0 5 776 27 0 0 0 chr3R 25066311 25066338 -2838715 + AT_rich Low_complexity Low_complexity 1 27 0 5 776 22 35 0 0 chr3R 25068827 25068856 -2836197 + AT_rich Low_complexity Low_complexity 1 29 0 5 776 28 48 0 0 chr3R 25069611 25069653 -2835400 + AT_rich Low_complexity Low_complexity 1 42 0 5 776 21 36 0 0 chr3R 25069893 25069921 -2835132 + AT_rich Low_complexity Low_complexity 1 28 0 5 776 29 0 0 0 chr3R 25070466 25070495 -2834558 + AT_rich Low_complexity Low_complexity 1 29 0 5 776 22 0 0 0 chr3R 25076913 25076935 -2828118 + AT_rich Low_complexity Low_complexity 1 22 0 5 776 180 77 0 0 chr3R 25079810 25079836 -2825217 + (TGG)n Simple_repeat Simple_repeat 1 26 0 5 776 188 149 21 0 chr3R 25081181 25081228 -2823825 + CT-rich Low_complexity Low_complexity 1 48 0 5 776 32 0 0 0 chr3R 25083420 25083452 -2821601 + AT_rich Low_complexity Low_complexity 1 32 0 5 776 228 86 0 0 chr3R 25089423 25089458 -2815595 + (GGATG)n Simple_repeat Simple_repeat 1 35 0 5 776 249 257 0 0 chr3R 25090698 25090807 -2814246 + (TGG)n Simple_repeat Simple_repeat 3 111 0 5 776 24 0 0 0 chr3R 25092356 25092380 -2812673 + AT_rich Low_complexity Low_complexity 1 24 0 5 776 26 50 0 0 chr3R 25098273 25098313 -2806740 + AT_rich Low_complexity Low_complexity 1 40 0 5 776 308 24 24 0 chr3R 25099355 25099396 -2805657 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 776 237 108 0 0 chr3R 25103294 25103331 -2801722 + (GGCTG)n Simple_repeat Simple_repeat 1 37 0 5 776 187 93 23 23 chr3R 25105361 25105405 -2799648 + (TATAA)n Simple_repeat Simple_repeat 5 48 0 5 776 26 30 0 0 chr3R 25105531 25105564 -2799489 + AT_rich Low_complexity Low_complexity 1 33 0 5 776 297 0 0 0 chr3R 25108582 25108615 -2796438 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 776 226 288 0 12 chr3R 25109990 25110071 -2794982 + (CGAAT)n Simple_repeat Simple_repeat 2 81 0 5 776 221 269 0 15 chr3R 25113146 25113214 -2791839 + GA-rich Low_complexity Low_complexity 1 67 0 5 776 21 0 0 0 chr3R 25129499 25129520 -2775533 + AT_rich Low_complexity Low_complexity 1 21 0 5 776 201 203 27 55 chr3R 25135325 25135398 -2769655 + (CCA)n Simple_repeat Simple_repeat 2 72 0 5 776 222 128 0 0 chr3R 25136872 25136911 -2768142 + (CAATC)n Simple_repeat Simple_repeat 3 41 0 5 776 25 0 0 0 chr3R 25140076 25140101 -2764952 + AT_rich Low_complexity Low_complexity 1 25 0 5 776 207 0 0 0 chr3R 25140758 25140781 -2764272 + (GTCTG)n Simple_repeat Simple_repeat 3 25 0 5 776 21 71 0 0 chr3R 25145543 25145585 -2759468 + AT_rich Low_complexity Low_complexity 1 42 0 5 776 2146 0 0 4 chr3R 25145606 25145854 -2759199 + LINEJ1_DM LINE Jockey 4761 5007 -13 5 776 509 304 25 9 chr3R 25146120 25146442 -2758611 + SAR_DM Satellite Satellite 572 898 -574 5 776 23 0 0 0 chr3R 25148923 25148946 -2756107 + GC_rich Low_complexity Low_complexity 1 23 0 5 776 42 82 0 0 chr3R 25151263 25151361 -2753692 + AT_rich Low_complexity Low_complexity 1 98 0 5 776 23 0 0 0 chr3R 25151753 25151776 -2753277 + AT_rich Low_complexity Low_complexity 1 23 0 5 776 471 63 0 0 chr3R 25151947 25152010 -2753043 + (ACTG)n Simple_repeat Simple_repeat 2 64 0 5 776 183 80 0 0 chr3R 25153082 25153107 -2751946 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 5 776 191 36 36 0 chr3R 25154160 25154188 -2750865 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 776 207 232 35 18 chr3R 25154314 25154371 -2750682 + (TCCG)n Simple_repeat Simple_repeat 4 61 0 5 776 243 0 0 0 chr3R 25155497 25155524 -2749529 + (GGA)n Simple_repeat Simple_repeat 3 29 0 5 776 381 22 0 0 chr3R 25159982 25160028 -2745025 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 776 258 143 0 0 chr3R 25160687 25160736 -2744317 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 776 22 0 0 0 chr3R 25161742 25161764 -2743289 + GC_rich Low_complexity Low_complexity 1 22 0 5 776 25 0 0 0 chr3R 25164439 25164464 -2740589 + AT_rich Low_complexity Low_complexity 1 25 0 5 776 192 241 0 0 chr3R 25164646 25164704 -2740349 + (ATGGTG)n Simple_repeat Simple_repeat 3 60 0 5 776 231 36 0 0 chr3R 25164749 25164777 -2740276 + (TTG)n Simple_repeat Simple_repeat 3 30 0 5 776 237 146 0 0 chr3R 25165207 25165255 -2739798 + (TTG)n Simple_repeat Simple_repeat 1 48 0 5 777 207 0 0 0 chr3R 25166355 25166378 -2738675 + (CTG)n Simple_repeat Simple_repeat 1 23 0 5 777 219 170 0 0 chr3R 25166960 25167007 -2738046 + (TCTG)n Simple_repeat Simple_repeat 4 50 0 5 777 195 69 0 0 chr3R 25168173 25168202 -2736851 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 777 207 0 0 0 chr3R 25172396 25172419 -2732634 + (A)n Simple_repeat Simple_repeat 1 23 0 5 777 180 200 0 0 chr3R 25173060 25173110 -2731943 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 777 267 213 0 0 chr3R 25173229 25173304 -2731749 + (TTG)n Simple_repeat Simple_repeat 1 75 0 5 777 192 152 0 0 chr3R 25173930 25173963 -2731090 + T-rich Low_complexity Low_complexity 1 33 0 5 777 203 157 20 0 chr3R 25175084 25175135 -2729918 + (CGAAA)n Simple_repeat Simple_repeat 3 54 0 5 777 23 0 0 0 chr3R 25176298 25176321 -2728732 + AT_rich Low_complexity Low_complexity 1 23 0 5 777 186 43 0 0 chr3R 25176463 25176486 -2728567 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 777 219 36 0 0 chr3R 25177002 25177030 -2728023 + (TTG)n Simple_repeat Simple_repeat 2 29 0 5 777 225 119 0 0 chr3R 25177079 25177121 -2727932 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 777 214 194 38 67 chr3R 25177192 25177297 -2727756 + A-rich Low_complexity Low_complexity 2 103 0 5 777 185 0 40 0 chr3R 25178187 25178212 -2726841 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 777 207 25 24 48 chr3R 25178994 25179036 -2726017 + (TTATA)n Simple_repeat Simple_repeat 4 44 0 5 777 279 0 0 0 chr3R 25179196 25179227 -2725826 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 777 22 0 0 0 chr3R 25180687 25180709 -2724344 + AT_rich Low_complexity Low_complexity 1 22 0 5 777 24 0 0 0 chr3R 25180852 25180876 -2724177 + AT_rich Low_complexity Low_complexity 1 24 0 5 777 203 133 0 0 chr3R 25187078 25187108 -2717945 + (CGGAA)n Simple_repeat Simple_repeat 1 30 0 5 777 192 77 0 0 chr3R 25187275 25187301 -2717752 + (GAAAA)n Simple_repeat Simple_repeat 2 27 0 5 777 218 123 13 64 chr3R 25188094 25188172 -2716881 + (CA)n Simple_repeat Simple_repeat 2 75 0 5 777 257 51 26 0 chr3R 25188298 25188337 -2716716 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 777 225 0 0 0 chr3R 25189491 25189516 -2715537 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 777 26 0 0 0 chr3R 25190162 25190188 -2714865 + AT_rich Low_complexity Low_complexity 1 26 0 5 777 261 109 0 0 chr3R 25192116 25192162 -2712891 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 777 225 65 0 0 chr3R 25196210 25196241 -2708812 + (TTG)n Simple_repeat Simple_repeat 3 33 0 5 777 207 189 0 0 chr3R 25196288 25196325 -2708728 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 777 323 127 16 0 chr3R 25196919 25196982 -2708071 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 777 34 42 0 0 chr3R 25202663 25202711 -2702342 + AT_rich Low_complexity Low_complexity 1 48 0 5 777 25 31 0 0 chr3R 25202789 25202821 -2702232 + AT_rich Low_complexity Low_complexity 1 32 0 5 777 27 49 0 0 chr3R 25205889 25205930 -2699123 + AT_rich Low_complexity Low_complexity 1 41 0 5 777 186 150 0 0 chr3R 25207874 25207914 -2697139 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 777 254 229 0 0 chr3R 25210804 25210865 -2694188 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 777 21 36 0 0 chr3R 25212497 25212525 -2692528 + AT_rich Low_complexity Low_complexity 1 28 0 5 777 189 0 0 0 chr3R 25214332 25214353 -2690700 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 777 26 50 0 0 chr3R 25214727 25214767 -2690286 + AT_rich Low_complexity Low_complexity 1 40 0 5 777 214 204 23 0 chr3R 25218431 25218475 -2686578 + (CATA)n Simple_repeat Simple_repeat 3 47 0 5 777 294 87 0 0 chr3R 25218654 25218700 -2686353 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 777 210 233 0 0 chr3R 25220153 25220196 -2684857 + GA-rich Low_complexity Low_complexity 3 45 0 5 777 206 121 0 0 chr3R 25222009 25222042 -2683011 + (GAATG)n Simple_repeat Simple_repeat 3 35 0 5 777 23 0 0 0 chr3R 25223264 25223287 -2681766 + AT_rich Low_complexity Low_complexity 1 23 0 5 777 180 0 0 0 chr3R 25226762 25226782 -2678271 + (CAGG)n Simple_repeat Simple_repeat 3 22 0 5 777 225 0 0 0 chr3R 25227050 25227075 -2677978 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 777 252 86 0 0 chr3R 25227466 25227501 -2677552 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 777 37 0 0 0 chr3R 25227903 25227940 -2677113 + AT_rich Low_complexity Low_complexity 1 37 0 5 777 180 163 0 0 chr3R 25229551 25229594 -2675459 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 777 255 118 0 56 chr3R 25232099 25232153 -2672900 - ROO_I LTR Pao -7511 745 695 5 777 11115 5 0 1 chr3R 25232395 25233593 -2671460 + LINEJ1_DM LINE Jockey 3819 5015 -5 5 777 195 129 0 0 chr3R 25234057 25234088 -2670965 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 777 230 197 15 15 chr3R 25235930 25235997 -2669056 + (TTG)n Simple_repeat Simple_repeat 2 68 0 5 777 207 255 0 0 chr3R 25236286 25236337 -2668716 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 777 207 273 15 0 chr3R 25236471 25236537 -2668516 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 777 22 0 0 0 chr3R 25237158 25237180 -2667873 + AT_rich Low_complexity Low_complexity 1 22 0 5 777 208 250 12 12 chr3R 25237427 25237512 -2667541 + (CA)n Simple_repeat Simple_repeat 2 86 0 5 777 257 118 20 0 chr3R 25238868 25238919 -2666134 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 777 21 0 0 0 chr3R 25240728 25240749 -2664304 + AT_rich Low_complexity Low_complexity 1 21 0 5 777 183 129 0 0 chr3R 25246723 25246754 -2658299 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 777 198 118 0 0 chr3R 25247436 25247470 -2657583 + (CGAGT)n Simple_repeat Simple_repeat 2 35 0 5 777 25 31 0 0 chr3R 25250092 25250124 -2654929 + AT_rich Low_complexity Low_complexity 1 32 0 5 777 21 36 0 0 chr3R 25250883 25250911 -2654142 + AT_rich Low_complexity Low_complexity 1 28 0 5 777 34 0 0 0 chr3R 25251529 25251563 -2653490 + AT_rich Low_complexity Low_complexity 1 34 0 5 777 186 103 0 0 chr3R 25251787 25251816 -2653237 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 777 21 36 0 0 chr3R 25251991 25252019 -2653034 + AT_rich Low_complexity Low_complexity 1 28 0 5 777 24 0 0 0 chr3R 25254919 25254943 -2650110 + AT_rich Low_complexity Low_complexity 1 24 0 5 777 255 61 0 0 chr3R 25255779 25255812 -2649241 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 777 216 0 0 0 chr3R 25256520 25256544 -2648509 + (CTG)n Simple_repeat Simple_repeat 3 26 0 5 777 195 129 0 0 chr3R 25259569 25259600 -2645453 + (TTTCG)n Simple_repeat Simple_repeat 4 34 0 5 777 186 43 0 0 chr3R 25263196 25263219 -2641834 + (TG)n Simple_repeat Simple_repeat 1 23 0 5 777 21 0 0 0 chr3R 25265841 25265862 -2639191 + AT_rich Low_complexity Low_complexity 1 21 0 5 777 25 0 0 0 chr3R 25266616 25266641 -2638412 + AT_rich Low_complexity Low_complexity 1 25 0 5 777 278 47 0 44 chr3R 25267112 25267157 -2637896 + (CAAAC)n Simple_repeat Simple_repeat 5 47 0 5 777 206 269 0 0 chr3R 25268863 25268915 -2636138 + (CGA)n Simple_repeat Simple_repeat 2 53 0 5 777 21 0 0 0 chr3R 25269850 25269871 -2635182 + AT_rich Low_complexity Low_complexity 1 21 0 5 777 207 0 0 0 chr3R 25271106 25271129 -2633924 + (T)n Simple_repeat Simple_repeat 1 23 0 5 777 213 94 0 0 chr3R 25271981 25272013 -2633040 + (TA)n Simple_repeat Simple_repeat 1 32 0 5 777 209 344 0 0 chr3R 25272917 25272978 -2632075 + G-rich Low_complexity Low_complexity 5 65 0 5 777 24 0 0 0 chr3R 25273314 25273338 -2631715 + AT_rich Low_complexity Low_complexity 1 24 0 5 777 192 40 0 0 chr3R 25276499 25276524 -2628529 + (CAT)n Simple_repeat Simple_repeat 3 27 0 5 777 306 0 0 0 chr3R 25281226 25281260 -2623793 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 777 211 179 18 18 chr3R 25282192 25282249 -2622804 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 777 234 0 0 0 chr3R 25282378 25282404 -2622649 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 777 205 295 0 25 chr3R 25283782 25283862 -2621191 + (CTG)n Simple_repeat Simple_repeat 3 80 0 5 777 209 246 0 17 chr3R 25283803 25283861 -2621192 + (TTG)n Simple_repeat Simple_repeat 1 57 0 5 777 198 0 0 0 chr3R 25283938 25283960 -2621093 + (TC)n Simple_repeat Simple_repeat 2 23 0 5 777 206 62 31 0 chr3R 25287129 25287161 -2617892 + (GA)n Simple_repeat Simple_repeat 2 34 0 5 777 21 57 0 0 chr3R 25289187 25289222 -2615831 + AT_rich Low_complexity Low_complexity 1 35 0 5 777 198 0 0 0 chr3R 25291327 25291349 -2613704 + (A)n Simple_repeat Simple_repeat 1 22 0 5 777 222 105 0 0 chr3R 25294083 25294121 -2610932 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 777 201 39 0 0 chr3R 25294379 25294405 -2610648 + (T)n Simple_repeat Simple_repeat 1 26 0 5 777 225 0 0 0 chr3R 25295500 25295525 -2609528 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 777 254 106 21 0 chr3R 25296324 25296371 -2608682 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 777 269 246 0 0 chr3R 25296479 25296540 -2608513 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 777 253 93 37 0 chr3R 25296694 25296748 -2608305 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 97 21 0 0 0 chr3R 25296887 25296908 -2608145 + AT_rich Low_complexity Low_complexity 1 21 0 5 778 33 56 0 0 chr3R 25297140 25297194 -2607859 + AT_rich Low_complexity Low_complexity 1 54 0 5 778 29 0 0 0 chr3R 25299789 25299818 -2605235 + AT_rich Low_complexity Low_complexity 1 29 0 5 778 180 0 0 0 chr3R 25301286 25301306 -2603747 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 778 463 104 18 28 chr3R 25309490 25309599 -2595454 + (CAG)n Simple_repeat Simple_repeat 3 110 0 5 778 27 62 0 0 chr3R 25310236 25310284 -2594769 + AT_rich Low_complexity Low_complexity 1 48 0 5 778 261 140 0 0 chr3R 25312418 25312475 -2592578 + (TAAAAA)n Simple_repeat Simple_repeat 2 58 0 5 778 25 0 0 0 chr3R 25316995 25317020 -2588033 + AT_rich Low_complexity Low_complexity 1 25 0 5 778 192 111 0 0 chr3R 25321286 25321322 -2583731 + (TAGA)n Simple_repeat Simple_repeat 1 36 0 5 778 23 33 0 0 chr3R 25324719 25324749 -2580304 + AT_rich Low_complexity Low_complexity 1 30 0 5 778 207 167 0 0 chr3R 25329043 25329079 -2575974 + (CGTG)n Simple_repeat Simple_repeat 3 38 0 5 778 353 22 22 0 chr3R 25332981 25333027 -2572026 + (TTTTA)n Simple_repeat Simple_repeat 3 49 0 5 778 273 250 0 0 chr3R 25333518 25333586 -2571467 + (CATCG)n Simple_repeat Simple_repeat 1 68 0 5 778 261 226 0 0 chr3R 25334438 25334500 -2570553 + (ACTG)n Simple_repeat Simple_repeat 3 64 0 5 778 267 250 0 26 chr3R 25335185 25335263 -2569790 + (CTG)n Simple_repeat Simple_repeat 2 77 0 5 778 345 187 9 142 chr3R 25336824 25336930 -2568123 - DMRP1 Unknown Unknown -1 345 254 5 778 741 67 0 0 chr3R 25336938 25337028 -2568025 - DMRP1 Unknown Unknown -227 119 30 5 778 210 71 0 0 chr3R 25340476 25340504 -2564549 + (CATTT)n Simple_repeat Simple_repeat 3 30 0 5 778 234 62 0 0 chr3R 25343807 25343839 -2561214 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 5 778 217 245 0 0 chr3R 25344688 25344737 -2560316 + (CAT)n Simple_repeat Simple_repeat 1 49 0 5 778 24 0 0 0 chr3R 25345195 25345219 -2559834 + AT_rich Low_complexity Low_complexity 1 24 0 5 778 28 29 0 0 chr3R 25345259 25345294 -2559759 + AT_rich Low_complexity Low_complexity 1 35 0 5 778 186 118 0 0 chr3R 25347730 25347764 -2557289 + (A)n Simple_repeat Simple_repeat 1 34 0 5 778 25 0 0 0 chr3R 25347888 25347913 -2557140 + AT_rich Low_complexity Low_complexity 1 25 0 5 778 182 122 0 68 chr3R 25351364 25351408 -2553645 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 778 29 47 0 0 chr3R 25354365 25354408 -2550645 + AT_rich Low_complexity Low_complexity 1 43 0 5 778 337 165 63 105 chr3R 25354976 25355071 -2549982 - DMRP1 Unknown Unknown -19 327 237 5 778 873 114 14 21 chr3R 25355082 25355225 -2549828 - DMRP1 Unknown Unknown -196 150 9 5 778 213 229 0 0 chr3R 25355751 25355799 -2549254 + (CATTT)n Simple_repeat Simple_repeat 3 50 0 5 778 342 67 0 0 chr3R 25356862 25356907 -2548146 + (CAAA)n Simple_repeat Simple_repeat 4 48 0 5 778 249 214 0 0 chr3R 25359829 25359885 -2545168 + A-rich Low_complexity Low_complexity 1 56 0 5 778 22 70 0 0 chr3R 25365308 25365351 -2539702 + AT_rich Low_complexity Low_complexity 1 43 0 5 778 30 0 0 0 chr3R 25375075 25375105 -2529948 + AT_rich Low_complexity Low_complexity 1 30 0 5 778 230 0 33 0 chr3R 25375873 25375903 -2529150 + (TTTAA)n Simple_repeat Simple_repeat 2 32 0 5 778 203 293 0 0 chr3R 25377912 25377970 -2527083 + (TCG)n Simple_repeat Simple_repeat 2 59 0 5 778 35 0 0 0 chr3R 25379998 25380033 -2525020 + AT_rich Low_complexity Low_complexity 1 35 0 5 778 260 250 12 0 chr3R 25382453 25382537 -2522516 + ROO_I LTR Pao 632 716 -7540 5 778 333 117 0 0 chr3R 25382621 25382681 -2522372 + (CAG)n Simple_repeat Simple_repeat 1 60 0 5 778 211 54 0 51 chr3R 25384350 25384389 -2520664 + (ATG)n Simple_repeat Simple_repeat 2 38 0 5 778 237 108 0 0 chr3R 25385317 25385354 -2519699 + (CATTT)n Simple_repeat Simple_repeat 4 40 0 5 778 208 0 62 0 chr3R 25386525 25386557 -2518496 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 778 256 188 49 12 chr3R 25386627 25386708 -2518345 - ROO_I LTR Pao -7530 726 643 5 778 185 159 0 22 chr3R 25387637 25387682 -2517371 + (CAG)n Simple_repeat Simple_repeat 1 44 0 5 778 24 0 0 0 chr3R 25388332 25388356 -2516697 + AT_rich Low_complexity Low_complexity 1 24 0 5 778 219 69 0 0 chr3R 25389438 25389467 -2515586 + (GGA)n Simple_repeat Simple_repeat 1 29 0 5 778 25 31 0 0 chr3R 25390976 25391008 -2514045 + AT_rich Low_complexity Low_complexity 1 32 0 5 778 27 0 0 0 chr3R 25391328 25391355 -2513698 + AT_rich Low_complexity Low_complexity 1 27 0 5 778 26 30 0 0 chr3R 25391926 25391959 -2513094 + AT_rich Low_complexity Low_complexity 1 33 0 5 778 186 118 0 0 chr3R 25393154 25393188 -2511865 + (TCTCCC)n Simple_repeat Simple_repeat 4 37 0 5 778 239 122 0 20 chr3R 25395922 25395972 -2509081 + (TTG)n Simple_repeat Simple_repeat 1 49 0 5 778 23 78 0 0 chr3R 25396107 25396158 -2508895 + AT_rich Low_complexity Low_complexity 1 51 0 5 778 204 40 0 0 chr3R 25397456 25397481 -2507572 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 778 186 167 0 0 chr3R 25397715 25397751 -2507302 + GA-rich Low_complexity Low_complexity 2 37 0 5 778 195 42 0 0 chr3R 25400402 25400426 -2504627 + (CAATC)n Simple_repeat Simple_repeat 3 26 0 5 778 240 35 0 0 chr3R 25400788 25400817 -2504236 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 778 21 0 0 0 chr3R 25401294 25401315 -2503738 + AT_rich Low_complexity Low_complexity 1 21 0 5 778 270 0 0 0 chr3R 25402519 25402549 -2502504 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 5 778 186 118 0 0 chr3R 25402751 25402785 -2502268 + (TTGG)n Simple_repeat Simple_repeat 4 37 0 5 778 216 0 0 0 chr3R 25409361 25409385 -2495668 + (T)n Simple_repeat Simple_repeat 1 24 0 5 778 249 83 0 0 chr3R 25411870 25411906 -2493147 + (CAGTT)n Simple_repeat Simple_repeat 5 40 0 5 778 330 169 0 0 chr3R 25414382 25414441 -2490612 + DNAREP1_DM LINE Penelope 536 594 0 5 778 38 0 0 0 chr3R 25414504 25414542 -2490511 + AT_rich Low_complexity Low_complexity 1 38 0 5 778 22 0 0 0 chr3R 25414726 25414748 -2490305 + AT_rich Low_complexity Low_complexity 1 22 0 5 778 294 73 0 0 chr3R 25414813 25414854 -2490199 + (TTG)n Simple_repeat Simple_repeat 3 43 0 5 778 248 0 31 0 chr3R 25423549 25423581 -2481472 + (CCAA)n Simple_repeat Simple_repeat 2 34 0 5 779 204 246 15 15 chr3R 25431058 25431124 -2473929 + (TTTG)n Simple_repeat Simple_repeat 4 69 0 5 779 219 36 0 0 chr3R 25432180 25432208 -2472845 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 779 198 103 0 0 chr3R 25433190 25433219 -2471834 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 779 22 0 0 0 chr3R 25433248 25433270 -2471783 + AT_rich Low_complexity Low_complexity 1 22 0 5 779 24 32 0 0 chr3R 25444517 25444548 -2460505 + AT_rich Low_complexity Low_complexity 1 31 0 5 779 26 50 0 0 chr3R 25448590 25448630 -2456423 + AT_rich Low_complexity Low_complexity 1 40 0 5 779 234 178 0 76 chr3R 25448933 25449012 -2456041 + (GTTTG)n Simple_repeat Simple_repeat 1 73 0 5 779 195 100 0 0 chr3R 25449081 25449111 -2455942 + (GAGTG)n Simple_repeat Simple_repeat 3 32 0 5 779 210 71 0 0 chr3R 25457116 25457144 -2447909 + (CGGAA)n Simple_repeat Simple_repeat 5 32 0 5 779 209 222 0 0 chr3R 25458980 25459025 -2446028 + T-rich Low_complexity Low_complexity 1 45 0 5 779 182 174 0 21 chr3R 25459094 25459141 -2445912 + (CAA)n Simple_repeat Simple_repeat 2 47 0 5 779 204 97 0 0 chr3R 25459186 25459217 -2445836 + (CAA)n Simple_repeat Simple_repeat 3 33 0 5 779 210 162 0 0 chr3R 25459483 25459520 -2445533 + T-rich Low_complexity Low_complexity 1 37 0 5 779 185 163 0 20 chr3R 25461237 25461287 -2443766 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 779 219 88 0 0 chr3R 25464102 25464136 -2440917 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 779 22 35 0 0 chr3R 25466261 25466290 -2438763 + AT_rich Low_complexity Low_complexity 1 29 0 5 779 180 143 0 0 chr3R 25466742 25466784 -2438269 + (TCC)n Simple_repeat Simple_repeat 1 42 0 5 779 879 244 54 20 chr3R 25470025 25470340 -2434713 + SAR_DM Satellite Satellite 1 325 -948 5 779 627 235 90 17 chr3R 25470146 25470380 -2434673 - XDMR_DM Unknown Unknown -4 356 106 5 779 207 69 0 0 chr3R 25472292 25472321 -2432732 + (CAGT)n Simple_repeat Simple_repeat 4 32 0 5 779 206 288 0 17 chr3R 25473197 25473257 -2431796 + (CGA)n Simple_repeat Simple_repeat 2 60 0 5 779 202 224 0 20 chr3R 25476211 25476261 -2428792 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 779 221 286 12 0 chr3R 25478610 25478694 -2426359 + (CA)n Simple_repeat Simple_repeat 1 85 0 5 779 2087 4 0 47 chr3R 25478835 25479109 -2425944 - LINEJ1_DM LINE Jockey 0 5020 4760 5 779 19322 7 1 0 chr3R 25479112 25481192 -2423861 - LINEJ1_DM LINE Jockey -2930 2090 10 5 779 22 35 0 0 chr3R 25485145 25485174 -2419879 + AT_rich Low_complexity Low_complexity 1 29 0 5 779 189 0 0 0 chr3R 25485923 25485944 -2419109 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 779 400 274 19 13 chr3R 25489357 25489516 -2415537 - XDMR Unknown Unknown -5 356 197 5 779 24 53 0 0 chr3R 25499415 25499453 -2405600 + AT_rich Low_complexity Low_complexity 1 38 0 5 779 213 39 0 0 chr3R 25516771 25516797 -2388256 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 779 198 71 0 0 chr3R 25517633 25517661 -2387392 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 779 267 31 0 0 chr3R 25517878 25517910 -2387143 + (CCA)n Simple_repeat Simple_repeat 1 32 0 5 779 220 191 0 0 chr3R 25519384 25519431 -2385622 + (CAG)n Simple_repeat Simple_repeat 1 47 0 5 779 468 126 0 0 chr3R 25521657 25521744 -2383309 + (CAG)n Simple_repeat Simple_repeat 1 87 0 5 779 213 258 0 0 chr3R 25524205 25524267 -2380786 + (CAG)n Simple_repeat Simple_repeat 2 63 0 5 779 189 0 0 0 chr3R 25526090 25526111 -2378942 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 5 779 21 0 0 0 chr3R 25526681 25526702 -2378351 + AT_rich Low_complexity Low_complexity 1 21 0 5 779 21 36 0 0 chr3R 25526975 25527003 -2378050 + AT_rich Low_complexity Low_complexity 1 28 0 5 779 180 111 0 0 chr3R 25529674 25529701 -2375352 + (CATA)n Simple_repeat Simple_repeat 2 28 0 5 779 25 31 0 0 chr3R 25531752 25531784 -2373269 + AT_rich Low_complexity Low_complexity 1 32 0 5 779 200 114 29 0 chr3R 25532432 25532467 -2372586 + (CTCA)n Simple_repeat Simple_repeat 2 37 0 5 779 228 67 0 0 chr3R 25533067 25533097 -2371956 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 779 26 0 0 0 chr3R 25533587 25533613 -2371440 + AT_rich Low_complexity Low_complexity 1 26 0 5 779 198 0 0 0 chr3R 25535164 25535186 -2369867 + (CCTG)n Simple_repeat Simple_repeat 3 24 0 5 779 22 0 0 0 chr3R 25537483 25537505 -2367548 + AT_rich Low_complexity Low_complexity 1 22 0 5 779 365 303 47 44 chr3R 25541407 25541728 -2363325 + SAR_DM Satellite Satellite 556 877 -595 5 779 204 97 0 0 chr3R 25544319 25544350 -2360703 + (CCA)n Simple_repeat Simple_repeat 2 32 0 5 779 207 69 0 0 chr3R 25545937 25545966 -2359087 + (CAGT)n Simple_repeat Simple_repeat 1 29 0 5 779 189 74 0 0 chr3R 25551796 25551823 -2353230 + (A)n Simple_repeat Simple_repeat 1 27 0 5 779 265 294 33 0 chr3R 25554095 25554187 -2350866 + ROO_I LTR Pao 641 735 -7521 5 780 24 0 0 0 chr3R 25563822 25563846 -2341207 + AT_rich Low_complexity Low_complexity 1 24 0 5 780 4644 2 2 10 chr3R 25564044 25564554 -2340499 - HOBO DNA hAT 0 3016 2511 5 780 8481 1 0 0 chr3R 25564546 25565450 -2339603 - HOBO DNA hAT -2112 904 1 5 780 34 0 0 0 chr3R 25574641 25574675 -2330378 + AT_rich Low_complexity Low_complexity 1 34 0 5 780 255 152 0 0 chr3R 25575352 25575398 -2329655 + (CGTG)n Simple_repeat Simple_repeat 2 47 0 5 780 198 103 0 0 chr3R 25575437 25575466 -2329587 + (TTG)n Simple_repeat Simple_repeat 3 31 0 5 780 223 237 0 0 chr3R 25578140 25578199 -2326854 + (CAG)n Simple_repeat Simple_repeat 1 59 0 5 780 181 176 14 29 chr3R 25579775 25579845 -2325208 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 5 780 22 88 0 0 chr3R 25582777 25582834 -2322219 + AT_rich Low_complexity Low_complexity 1 57 0 5 780 23 33 0 0 chr3R 25583684 25583714 -2321339 + AT_rich Low_complexity Low_complexity 1 30 0 5 780 213 94 0 0 chr3R 25585922 25585954 -2319099 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 780 21 0 0 0 chr3R 25585999 25586020 -2319033 + AT_rich Low_complexity Low_complexity 1 21 0 5 780 4952 2 2 2 chr3R 25586136 25586683 -2318370 + POGO DNA Pogo 1 547 -1574 5 780 5343 2 3 3 chr3R 25586674 25587282 -2317771 + POGO DNA Pogo 1514 2121 0 5 780 25 0 0 0 chr3R 25588200 25588225 -2316828 + AT_rich Low_complexity Low_complexity 1 25 0 5 780 209 269 0 25 chr3R 25589814 25589894 -2315159 + CT-rich Low_complexity Low_complexity 4 81 0 5 780 227 228 0 17 chr3R 25589921 25589979 -2315074 + (CAA)n Simple_repeat Simple_repeat 2 58 0 5 780 216 67 0 0 chr3R 25590176 25590206 -2314847 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 780 399 130 0 0 chr3R 25592753 25592830 -2312223 + (CAG)n Simple_repeat Simple_repeat 3 79 0 5 780 189 74 0 0 chr3R 25593011 25593038 -2312015 + (CAG)n Simple_repeat Simple_repeat 3 29 0 5 780 180 0 0 0 chr3R 25593147 25593167 -2311886 + (CAG)n Simple_repeat Simple_repeat 1 20 0 5 780 322 212 11 34 chr3R 25593186 25593274 -2311779 + ROO_I LTR Pao 658 743 -7513 5 780 21 0 0 0 chr3R 25594019 25594040 -2311013 + AT_rich Low_complexity Low_complexity 1 21 0 5 780 237 173 0 19 chr3R 25598750 25598803 -2306250 + CT-rich Low_complexity Low_complexity 1 52 0 5 780 218 204 0 0 chr3R 25599220 25599269 -2305784 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 780 222 62 0 0 chr3R 25600321 25600353 -2304700 + (GA)n Simple_repeat Simple_repeat 2 33 0 5 780 22 0 0 0 chr3R 25600940 25600962 -2304091 + AT_rich Low_complexity Low_complexity 1 22 0 5 780 23 0 0 0 chr3R 25601892 25601915 -2303138 + AT_rich Low_complexity Low_complexity 1 23 0 5 780 24 32 0 0 chr3R 25602461 25602492 -2302561 + AT_rich Low_complexity Low_complexity 1 31 0 5 780 204 40 0 0 chr3R 25604624 25604649 -2300404 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 780 24 53 0 0 chr3R 25604854 25604892 -2300161 + AT_rich Low_complexity Low_complexity 1 38 0 5 780 204 135 0 0 chr3R 25607699 25607736 -2297317 + (GAATG)n Simple_repeat Simple_repeat 4 40 0 5 780 225 0 0 0 chr3R 25610057 25610082 -2294971 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 780 192 77 0 0 chr3R 25611412 25611438 -2293615 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 780 201 152 0 0 chr3R 25612079 25612112 -2292941 + A-rich Low_complexity Low_complexity 2 34 0 5 780 225 0 0 0 chr3R 25614049 25614074 -2290979 + (AACTG)n Simple_repeat Simple_repeat 4 28 0 5 780 272 120 0 20 chr3R 25614543 25614594 -2290459 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 780 240 86 0 0 chr3R 25614960 25614995 -2290058 + (TA)n Simple_repeat Simple_repeat 1 35 0 5 780 368 204 0 53 chr3R 25615946 25616060 -2288993 + ROO_I LTR Pao 644 751 -7505 5 780 186 43 0 0 chr3R 25616243 25616266 -2288787 + (CAG)n Simple_repeat Simple_repeat 1 23 0 5 780 218 311 0 0 chr3R 25618011 25618072 -2286981 + (CAG)n Simple_repeat Simple_repeat 2 62 0 5 780 209 227 0 0 chr3R 25618391 25618435 -2286618 + (CAA)n Simple_repeat Simple_repeat 1 44 0 5 780 27 29 0 0 chr3R 25625258 25625292 -2279761 + AT_rich Low_complexity Low_complexity 1 34 0 5 780 195 42 0 0 chr3R 25647747 25647771 -2257282 + (GAGTG)n Simple_repeat Simple_repeat 2 25 0 5 780 189 107 0 0 chr3R 25651732 25651760 -2253293 + (GTCTG)n Simple_repeat Simple_repeat 5 32 0 5 780 213 65 0 0 chr3R 25661008 25661039 -2244014 + (TAAAG)n Simple_repeat Simple_repeat 3 33 0 5 780 186 167 0 0 chr3R 25663990 25664026 -2241027 + (CAGC)n Simple_repeat Simple_repeat 1 36 0 5 780 192 111 0 0 chr3R 25666780 25666816 -2238237 + (CATTG)n Simple_repeat Simple_repeat 4 39 0 5 780 243 0 0 0 chr3R 25667190 25667217 -2237836 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 780 23 33 0 0 chr3R 25668607 25668637 -2236416 + AT_rich Low_complexity Low_complexity 1 30 0 5 780 218 0 95 0 chr3R 25669633 25669675 -2235378 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 780 214 184 0 20 chr3R 25669806 25669856 -2235197 + CT-rich Low_complexity Low_complexity 1 49 0 5 780 23 0 0 0 chr3R 25685857 25685880 -2219173 + AT_rich Low_complexity Low_complexity 1 23 0 5 781 22 35 0 0 chr3R 25694878 25694907 -2210146 + AT_rich Low_complexity Low_complexity 1 29 0 5 781 229 182 0 0 chr3R 25697207 25697251 -2207802 + (CAG)n Simple_repeat Simple_repeat 3 46 0 5 781 222 158 0 66 chr3R 25704076 25704137 -2200916 + (CCA)n Simple_repeat Simple_repeat 3 59 0 5 781 195 100 0 0 chr3R 25706211 25706241 -2198812 + (CAG)n Simple_repeat Simple_repeat 1 30 0 5 781 22 0 0 0 chr3R 25706646 25706668 -2198385 + AT_rich Low_complexity Low_complexity 1 22 0 5 781 3990 2 0 0 chr3R 25707796 25708224 -2196829 + ROO_LTR LTR Pao 1 428 0 5 781 74526 1 3 1 chr3R 25708224 25716467 -2188586 + ROO_I LTR Pao 1 8256 0 5 781 3990 2 0 0 chr3R 25716467 25716895 -2188158 + ROO_LTR LTR Pao 1 428 0 5 781 202 280 13 0 chr3R 25722810 25722885 -2182168 + (ATG)n Simple_repeat Simple_repeat 2 77 0 5 781 201 270 0 0 chr3R 25725529 25725618 -2179435 + (CAAG)n Simple_repeat Simple_repeat 1 89 0 5 781 33 25 0 0 chr3R 25727362 25727402 -2177651 + AT_rich Low_complexity Low_complexity 1 40 0 5 781 234 238 0 0 chr3R 25727996 25728059 -2176994 + GA-rich Low_complexity Low_complexity 3 65 0 5 781 24 0 0 0 chr3R 25729621 25729645 -2175408 + AT_rich Low_complexity Low_complexity 1 24 0 5 781 21 57 0 0 chr3R 25729754 25729789 -2175264 + AT_rich Low_complexity Low_complexity 1 35 0 5 781 25 65 0 0 chr3R 25729992 25730038 -2175015 + AT_rich Low_complexity Low_complexity 1 46 0 5 781 222 254 0 0 chr3R 25735829 25735888 -2169165 + (CCCCAG)n Simple_repeat Simple_repeat 4 62 0 5 781 189 0 0 0 chr3R 25736631 25736652 -2168401 + (TA)n Simple_repeat Simple_repeat 1 21 0 5 781 24 32 0 0 chr3R 25739660 25739691 -2165362 + AT_rich Low_complexity Low_complexity 1 31 0 5 781 186 50 0 70 chr3R 25749033 25749076 -2155977 + (TTA)n Simple_repeat Simple_repeat 3 42 0 5 781 21 36 0 0 chr3R 25749170 25749198 -2155855 + AT_rich Low_complexity Low_complexity 1 28 0 5 781 22 70 0 0 chr3R 25752134 25752177 -2152876 + AT_rich Low_complexity Low_complexity 1 43 0 5 781 22 0 0 0 chr3R 25768740 25768762 -2136291 + AT_rich Low_complexity Low_complexity 1 22 0 5 781 233 220 0 0 chr3R 25783810 25783860 -2121193 + (TATATG)n Simple_repeat Simple_repeat 1 50 0 5 781 219 122 40 20 chr3R 25785447 25785497 -2119556 + (CACTC)n Simple_repeat Simple_repeat 5 55 0 5 781 26 30 0 0 chr3R 25787237 25787270 -2117783 + AT_rich Low_complexity Low_complexity 1 33 0 5 781 192 40 0 0 chr3R 25787605 25787630 -2117423 + (CTG)n Simple_repeat Simple_repeat 1 25 0 5 781 213 39 0 0 chr3R 25794098 25794124 -2110929 + (TTTTA)n Simple_repeat Simple_repeat 5 30 0 5 781 532 244 12 56 chr3R 25795942 25796159 -2108894 + SAR_DM Satellite Satellite 1 207 -1031 5 781 549 226 37 66 chr3R 25798388 25798630 -2106423 + SAR_DM Satellite Satellite 601 835 -637 5 781 249 83 0 0 chr3R 25801616 25801652 -2103401 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 781 192 40 0 0 chr3R 25809872 25809897 -2095156 + (CATCC)n Simple_repeat Simple_repeat 3 27 0 5 781 209 205 0 0 chr3R 25809947 25809986 -2095067 + (CGAAT)n Simple_repeat Simple_repeat 4 42 0 5 781 230 116 0 23 chr3R 25816074 25816118 -2088935 + (CAG)n Simple_repeat Simple_repeat 1 43 0 5 781 23 0 0 0 chr3R 25821041 25821064 -2083989 + AT_rich Low_complexity Low_complexity 1 23 0 5 782 228 67 0 0 chr3R 25829675 25829705 -2075348 + (TGGA)n Simple_repeat Simple_repeat 3 32 0 5 782 22 0 0 0 chr3R 25830514 25830536 -2074517 + AT_rich Low_complexity Low_complexity 1 22 0 5 782 35 0 0 0 chr3R 25831594 25831629 -2073424 + AT_rich Low_complexity Low_complexity 1 35 0 5 782 202 257 0 0 chr3R 25835556 25835630 -2069423 + GA-rich Low_complexity Low_complexity 3 76 0 5 782 30 77 0 0 chr3R 25838175 25838240 -2066813 + AT_rich Low_complexity Low_complexity 1 65 0 5 782 180 0 0 0 chr3R 25849068 25849088 -2055965 + (ATAGG)n Simple_repeat Simple_repeat 3 22 0 5 782 194 136 23 0 chr3R 25850863 25850907 -2054146 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 782 247 158 0 0 chr3R 25855289 25855327 -2049726 + (CCCGAA)n Simple_repeat Simple_repeat 2 39 0 5 782 183 129 0 0 chr3R 25859658 25859689 -2045364 + (CAG)n Simple_repeat Simple_repeat 1 31 0 5 782 26 74 0 0 chr3R 25868756 25868810 -2036243 + AT_rich Low_complexity Low_complexity 1 54 0 5 782 180 0 0 0 chr3R 25869665 25869685 -2035368 + (CGA)n Simple_repeat Simple_repeat 2 21 0 5 782 306 98 0 0 chr3R 25875428 25875479 -2029574 + (CATCC)n Simple_repeat Simple_repeat 4 54 0 5 782 222 37 0 0 chr3R 25877780 25877807 -2027246 + (ATTCG)n Simple_repeat Simple_repeat 1 27 0 5 782 207 139 0 0 chr3R 25884252 25884288 -2020765 + (CAA)n Simple_repeat Simple_repeat 3 38 0 5 782 201 159 0 0 chr3R 25884719 25884763 -2020290 + CT-rich Low_complexity Low_complexity 1 44 0 5 782 21 0 0 0 chr3R 25885995 25886016 -2019037 + AT_rich Low_complexity Low_complexity 1 21 0 5 782 237 65 0 0 chr3R 25886707 25886738 -2018315 + (TTG)n Simple_repeat Simple_repeat 2 32 0 5 782 252 226 32 16 chr3R 25890555 25890618 -2014435 + TART LINE telomeric 12639 12702 -1775 5 782 207 0 0 0 chr3R 25896386 25896409 -2008644 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 782 22 70 0 0 chr3R 25901330 25901373 -2003680 + AT_rich Low_complexity Low_complexity 1 43 0 5 782 306 150 16 32 chr3R 25902003 25902065 -2002988 - DNAREP1_DM LINE Penelope -533 61 1 5 782 210 192 0 0 chr3R 25902270 25902322 -2002731 + CT-rich Low_complexity Low_complexity 4 55 0 5 782 201 210 0 0 chr3R 25906064 25906126 -1998927 + (CTG)n Simple_repeat Simple_repeat 2 63 0 5 782 21 0 0 0 chr3R 25908651 25908672 -1996381 + AT_rich Low_complexity Low_complexity 1 21 0 5 782 8493 1 0 0 chr3R 25910629 25911533 -1993520 + HOBO DNA hAT 1 904 -2112 5 782 4650 2 2 10 chr3R 25911525 25912035 -1993018 + HOBO DNA hAT 2511 3016 0 5 782 222 37 0 0 chr3R 25915120 25915147 -1989906 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 782 42 0 0 0 chr3R 25915461 25915503 -1989550 + AT_rich Low_complexity Low_complexity 1 42 0 5 782 300 53 0 0 chr3R 25919588 25919626 -1985427 + (CAT)n Simple_repeat Simple_repeat 3 40 0 5 782 189 196 0 0 chr3R 25924016 25924067 -1980986 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 782 216 0 0 0 chr3R 25925335 25925359 -1979694 + (A)n Simple_repeat Simple_repeat 1 24 0 5 782 198 71 0 0 chr3R 25931587 25931615 -1973438 + (T)n Simple_repeat Simple_repeat 1 28 0 5 782 336 121 0 81 chr3R 25935322 25935421 -1969632 + ROO_I LTR Pao 639 729 -7527 5 782 255 242 20 50 chr3R 25935772 25935872 -1969181 + ROO_I LTR Pao 647 743 -7513 5 782 186 143 0 0 chr3R 25936076 25936111 -1968942 + (CAG)n Simple_repeat Simple_repeat 2 36 0 5 782 383 174 33 0 chr3R 25936137 25936229 -1968824 + ROO_I LTR Pao 640 734 -7522 5 782 303 71 0 0 chr3R 25937516 25937558 -1967495 + (CAG)n Simple_repeat Simple_repeat 1 42 0 5 782 348 94 0 0 chr3R 25937614 25937667 -1967386 + (CAG)n Simple_repeat Simple_repeat 3 55 0 5 782 200 233 0 0 chr3R 25938557 25938600 -1966453 + (CAATC)n Simple_repeat Simple_repeat 5 47 0 5 782 201 74 0 0 chr3R 25939295 25939322 -1965731 + (A)n Simple_repeat Simple_repeat 1 27 0 5 782 220 188 36 36 chr3R 25941986 25942069 -1962984 + (CTAAA)n Simple_repeat Simple_repeat 3 85 0 5 782 251 122 20 0 chr3R 25942860 25942909 -1962144 + (TA)n Simple_repeat Simple_repeat 1 50 0 5 782 25 51 0 0 chr3R 25942983 25943022 -1962031 + AT_rich Low_complexity Low_complexity 1 39 0 5 782 21 36 0 0 chr3R 25947082 25947110 -1957943 + AT_rich Low_complexity Low_complexity 1 28 0 5 782 23 33 0 0 chr3R 25947201 25947231 -1957822 + AT_rich Low_complexity Low_complexity 1 30 0 5 782 21 0 0 0 chr3R 25948117 25948138 -1956915 + AT_rich Low_complexity Low_complexity 1 21 0 5 783 21 0 0 0 chr3R 25974081 25974102 -1930951 + AT_rich Low_complexity Low_complexity 1 21 0 5 783 209 260 13 27 chr3R 25974559 25974634 -1930419 + (TGGA)n Simple_repeat Simple_repeat 2 75 0 5 783 28 0 0 0 chr3R 25975195 25975223 -1929830 + AT_rich Low_complexity Low_complexity 1 28 0 5 783 725 286 26 24 chr3R 25976588 25977007 -1928046 - SAR_DM Satellite Satellite -525 947 528 5 783 25 51 0 0 chr3R 25985317 25985356 -1919697 + AT_rich Low_complexity Low_complexity 1 39 0 5 783 183 100 0 0 chr3R 25989312 25989342 -1915711 + (GTTTG)n Simple_repeat Simple_repeat 5 34 0 5 783 246 128 0 0 chr3R 26000133 26000172 -1904881 + (TTCGG)n Simple_repeat Simple_repeat 4 42 0 5 783 21 71 0 0 chr3R 26005824 26005866 -1899187 + AT_rich Low_complexity Low_complexity 1 42 0 5 783 250 278 0 0 chr3R 26018279 26018333 -1886720 + (CCCGAA)n Simple_repeat Simple_repeat 5 58 0 5 783 203 147 0 0 chr3R 26024327 26024361 -1880692 + (TCC)n Simple_repeat Simple_repeat 1 34 0 5 783 23 0 0 0 chr3R 26027331 26027354 -1877699 + AT_rich Low_complexity Low_complexity 1 23 0 5 783 26 0 0 0 chr3R 26034983 26035009 -1870044 + AT_rich Low_complexity Low_complexity 1 26 0 5 783 24 0 0 0 chr3R 26036930 26036954 -1868099 + AT_rich Low_complexity Low_complexity 1 24 0 5 783 35 41 0 0 chr3R 26037488 26037537 -1867516 + AT_rich Low_complexity Low_complexity 1 49 0 5 783 23 54 0 0 chr3R 26038223 26038260 -1866793 + AT_rich Low_complexity Low_complexity 1 37 0 5 783 22 56 0 0 chr3R 26038903 26038939 -1866114 + AT_rich Low_complexity Low_complexity 1 36 0 5 783 201 108 0 0 chr3R 26039869 26039906 -1865147 + (TTTTTA)n Simple_repeat Simple_repeat 1 37 0 5 783 22 56 0 0 chr3R 26041163 26041199 -1863854 + AT_rich Low_complexity Low_complexity 1 36 0 5 783 24 0 0 0 chr3R 26047958 26047982 -1857071 + AT_rich Low_complexity Low_complexity 1 24 0 5 783 29 28 0 0 chr3R 26048215 26048251 -1856802 + AT_rich Low_complexity Low_complexity 1 36 0 5 783 21 0 0 0 chr3R 26053185 26053206 -1851847 + AT_rich Low_complexity Low_complexity 1 21 0 5 783 21 0 0 0 chr3R 26053364 26053385 -1851668 + AT_rich Low_complexity Low_complexity 1 21 0 5 783 22 0 0 0 chr3R 26054188 26054210 -1850843 + AT_rich Low_complexity Low_complexity 1 22 0 5 783 261 0 0 0 chr3R 26055194 26055223 -1849830 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 783 9513 19 4 3 chr3R 26064540 26065644 -1839409 + PROTOP_A DNA P 1 1105 0 5 783 23 0 0 0 chr3R 26068327 26068350 -1836703 + AT_rich Low_complexity Low_complexity 1 23 0 5 783 26 0 0 0 chr3R 26072004 26072030 -1833023 + AT_rich Low_complexity Low_complexity 1 26 0 5 783 22 35 0 0 chr3R 26072351 26072380 -1832673 + AT_rich Low_complexity Low_complexity 1 29 0 5 783 226 367 0 0 chr3R 26078181 26078361 -1826692 + (CTG)n Simple_repeat Simple_repeat 1 180 0 5 783 21 57 0 0 chr3R 26079451 26079486 -1825567 + AT_rich Low_complexity Low_complexity 1 35 0 5 783 243 88 0 0 chr3R 26080906 26080940 -1824113 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 783 22 0 0 0 chr3R 26081377 26081399 -1823654 + AT_rich Low_complexity Low_complexity 1 22 0 5 783 227 238 0 130 chr3R 26082503 26082595 -1822458 + Stalker2_LTR LTR Gypsy 209 288 -136 5 783 25 65 0 0 chr3R 26083116 26083162 -1821891 + AT_rich Low_complexity Low_complexity 1 46 0 5 784 21 0 0 0 chr3R 26083464 26083485 -1821568 + AT_rich Low_complexity Low_complexity 1 21 0 5 784 23 0 0 0 chr3R 26086540 26086563 -1818490 + AT_rich Low_complexity Low_complexity 1 23 0 5 784 23 0 0 0 chr3R 26088296 26088319 -1816734 + AT_rich Low_complexity Low_complexity 1 23 0 5 784 215 118 0 89 chr3R 26090682 26090738 -1814315 + (CAGAGA)n Simple_repeat Simple_repeat 5 55 0 5 784 23 33 0 0 chr3R 26092202 26092232 -1812821 + AT_rich Low_complexity Low_complexity 1 30 0 5 784 21 57 0 0 chr3R 26096446 26096481 -1808572 + AT_rich Low_complexity Low_complexity 1 35 0 5 784 180 0 0 0 chr3R 26098982 26099002 -1806051 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 784 229 208 0 0 chr3R 26101799 26101847 -1803206 + (CATA)n Simple_repeat Simple_repeat 2 49 0 5 784 31 44 0 0 chr3R 26103042 26103087 -1801966 + AT_rich Low_complexity Low_complexity 1 45 0 5 784 225 191 0 45 chr3R 26104680 26104768 -1800285 + ROO_I LTR Pao 651 734 -7522 5 784 195 42 0 0 chr3R 26105691 26105715 -1799338 + (CAG)n Simple_repeat Simple_repeat 1 24 0 5 784 309 89 0 0 chr3R 26105805 26105850 -1799203 + (CAG)n Simple_repeat Simple_repeat 1 45 0 5 784 22 0 0 0 chr3R 26107446 26107468 -1797585 + AT_rich Low_complexity Low_complexity 1 22 0 5 784 212 143 0 0 chr3R 26107814 26107849 -1797204 + (TC)n Simple_repeat Simple_repeat 1 35 0 5 784 180 0 0 0 chr3R 26110674 26110694 -1794359 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 784 208 277 0 0 chr3R 26111872 26111919 -1793134 + C-rich Low_complexity Low_complexity 1 47 0 5 784 182 118 29 0 chr3R 26112561 26112595 -1792458 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 5 784 25 0 0 0 chr3R 26112909 26112934 -1792119 + AT_rich Low_complexity Low_complexity 1 25 0 5 784 22 0 0 0 chr3R 26119240 26119262 -1785791 + AT_rich Low_complexity Low_complexity 1 22 0 5 784 37 52 0 0 chr3R 26119322 26119380 -1785673 + AT_rich Low_complexity Low_complexity 1 58 0 5 784 207 100 0 0 chr3R 26120027 26120057 -1784996 + (TATATG)n Simple_repeat Simple_repeat 1 30 0 5 784 52 41 0 0 chr3R 26120847 26120920 -1784133 + AT_rich Low_complexity Low_complexity 1 73 0 5 784 22 0 0 0 chr3R 26121097 26121119 -1783934 + AT_rich Low_complexity Low_complexity 1 22 0 5 784 24 0 0 0 chr3R 26121905 26121929 -1783124 + AT_rich Low_complexity Low_complexity 1 24 0 5 784 222 136 23 0 chr3R 26121984 26122028 -1783025 + (CTG)n Simple_repeat Simple_repeat 3 47 0 5 784 25 65 0 0 chr3R 26123441 26123487 -1781566 + AT_rich Low_complexity Low_complexity 1 46 0 5 784 30 0 0 0 chr3R 26129491 26129521 -1775532 + AT_rich Low_complexity Low_complexity 1 30 0 5 784 24 0 0 0 chr3R 26133996 26134020 -1771033 + AT_rich Low_complexity Low_complexity 1 24 0 5 784 180 135 0 0 chr3R 26134031 26134068 -1770985 + (A)n Simple_repeat Simple_repeat 1 37 0 5 784 242 311 23 8 chr3R 26134164 26134297 -1770756 + T-rich Low_complexity Low_complexity 3 137 0 5 784 29 28 0 0 chr3R 26134376 26134412 -1770641 + AT_rich Low_complexity Low_complexity 1 36 0 5 784 222 37 0 0 chr3R 26134447 26134474 -1770579 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 5 784 189 0 0 0 chr3R 26138592 26138613 -1766440 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 784 276 120 0 0 chr3R 26140225 26140275 -1764778 + (A)n Simple_repeat Simple_repeat 1 50 0 5 784 32 0 0 0 chr3R 26140389 26140421 -1764632 + AT_rich Low_complexity Low_complexity 1 32 0 5 784 212 229 16 32 chr3R 26141186 26141249 -1763804 + (CACTT)n Simple_repeat Simple_repeat 4 65 0 5 784 546 43 0 0 chr3R 26141366 26141435 -1763618 + (CAT)n Simple_repeat Simple_repeat 2 70 0 5 784 3712 2 0 2 chr3R 26143102 26143531 -1761522 + ROO_LTR LTR Pao 1 428 0 5 784 49506 5 5 2 chr3R 26143531 26149437 -1755616 + ROO_I LTR Pao 1 5920 -2336 5 784 6390 4 16 0 chr3R 26149434 26150207 -1754846 + ROO_I LTR Pao 7472 8256 0 5 784 3712 2 0 2 chr3R 26150207 26150636 -1754417 + ROO_LTR LTR Pao 1 428 0 5 784 192 40 0 0 chr3R 26150964 26150989 -1754064 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 784 30 0 0 0 chr3R 26152564 26152594 -1752459 + AT_rich Low_complexity Low_complexity 1 30 0 5 784 303 93 0 0 chr3R 26153500 26153543 -1751510 + (TGAA)n Simple_repeat Simple_repeat 4 46 0 5 784 21 36 0 0 chr3R 26158134 26158162 -1746891 + AT_rich Low_complexity Low_complexity 1 28 0 5 784 291 28 0 0 chr3R 26160674 26160710 -1744343 + (A)n Simple_repeat Simple_repeat 1 36 0 5 784 21 0 0 0 chr3R 26161064 26161085 -1743968 + AT_rich Low_complexity Low_complexity 1 21 0 5 784 23 33 0 0 chr3R 26163001 26163031 -1742022 + AT_rich Low_complexity Low_complexity 1 30 0 5 784 200 182 0 0 chr3R 26163819 26163852 -1741201 + (CAG)n Simple_repeat Simple_repeat 1 33 0 5 784 22 0 0 0 chr3R 26165323 26165345 -1739708 + GC_rich Low_complexity Low_complexity 1 22 0 5 784 250 213 0 0 chr3R 26165370 26165417 -1739636 + (CAG)n Simple_repeat Simple_repeat 1 47 0 5 784 228 140 51 34 chr3R 26165497 26165556 -1739497 + (TCTG)n Simple_repeat Simple_repeat 3 62 0 5 784 207 0 0 0 chr3R 26165556 26165579 -1739474 + (TA)n Simple_repeat Simple_repeat 2 24 0 5 784 22 0 0 0 chr3R 26166789 26166811 -1738242 + AT_rich Low_complexity Low_complexity 1 22 0 5 784 26 0 0 0 chr3R 26169753 26169779 -1735274 + AT_rich Low_complexity Low_complexity 1 26 0 5 784 22 0 0 0 chr3R 26170379 26170401 -1734652 + AT_rich Low_complexity Low_complexity 1 22 0 5 784 180 0 0 0 chr3R 26171451 26171471 -1733582 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 784 471 18 0 0 chr3R 26172778 26172834 -1732219 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 784 203 250 0 0 chr3R 26173054 26173102 -1731951 + (CAGTC)n Simple_repeat Simple_repeat 4 51 0 5 784 230 0 0 32 chr3R 26173459 26173490 -1731563 + (TA)n Simple_repeat Simple_repeat 1 30 0 5 784 210 317 9 9 chr3R 26177534 26177639 -1727414 + (TCTG)n Simple_repeat Simple_repeat 4 108 0 5 784 243 0 0 0 chr3R 26177758 26177785 -1727268 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 784 21 0 0 0 chr3R 26178765 26178786 -1726267 + AT_rich Low_complexity Low_complexity 1 21 0 5 784 189 74 0 0 chr3R 26180235 26180262 -1724791 + (T)n Simple_repeat Simple_repeat 1 27 0 5 784 204 40 0 0 chr3R 26180418 26180443 -1724610 + (GAGTG)n Simple_repeat Simple_repeat 1 25 0 5 784 201 156 0 0 chr3R 26183513 26183545 -1721508 + (ACTG)n Simple_repeat Simple_repeat 2 33 0 5 784 186 43 0 0 chr3R 26183601 26183624 -1721429 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 784 273 57 0 0 chr3R 26184763 26184798 -1720255 + (CTG)n Simple_repeat Simple_repeat 3 37 0 5 784 183 139 0 0 chr3R 26186475 26186511 -1718542 + (CAG)n Simple_repeat Simple_repeat 1 36 0 5 784 331 184 0 28 chr3R 26186511 26186617 -1718436 + ROO_I LTR Pao 641 743 -7513 5 784 282 183 0 0 chr3R 26186709 26186780 -1718273 + (CAG)n Simple_repeat Simple_repeat 1 71 0 5 784 231 114 0 0 chr3R 26186829 26186864 -1718189 + (CAG)n Simple_repeat Simple_repeat 2 36 0 5 784 255 301 0 0 chr3R 26187891 26187974 -1717079 + A-rich Low_complexity Low_complexity 2 84 0 5 784 22 35 0 0 chr3R 26189011 26189040 -1716013 + AT_rich Low_complexity Low_complexity 1 29 0 5 784 218 125 21 0 chr3R 26194359 26194407 -1710646 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 784 213 139 0 0 chr3R 26195072 26195115 -1709938 + (A)n Simple_repeat Simple_repeat 1 43 0 5 784 200 131 0 21 chr3R 26195768 26195815 -1709238 + (CTAAA)n Simple_repeat Simple_repeat 4 49 0 5 784 273 186 0 0 chr3R 26196230 26196300 -1708753 + (CA)n Simple_repeat Simple_repeat 2 71 0 5 784 222 261 0 0 chr3R 26197667 26197732 -1707321 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 784 24 0 0 0 chr3R 26197897 26197921 -1707132 + AT_rich Low_complexity Low_complexity 1 24 0 5 784 26 0 0 0 chr3R 26199737 26199763 -1705290 + AT_rich Low_complexity Low_complexity 1 26 0 5 784 26 0 0 0 chr3R 26201288 26201314 -1703739 + AT_rich Low_complexity Low_complexity 1 26 0 5 784 61886 2 1 14 chr3R 26201315 26208883 -1696170 + DM412 LTR Gypsy 1 6897 0 5 784 243 79 0 0 chr3R 26209189 26209227 -1695826 + (TTCGG)n Simple_repeat Simple_repeat 1 38 0 5 784 518 276 54 47 chr3R 26210902 26211179 -1693874 - SAR_DM Satellite Satellite -588 884 606 5 784 21 0 0 0 chr3R 26212417 26212438 -1692615 + AT_rich Low_complexity Low_complexity 1 21 0 5 785 207 88 0 0 chr3R 26218319 26218353 -1686700 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 785 4017 0 0 0 chr3R 26221994 26222422 -1682631 + ROO_LTR LTR Pao 1 428 0 5 785 62007 1 1 0 chr3R 26222422 26229262 -1675791 + ROO_I LTR Pao 1 6850 -1406 5 785 4408 0 2 0 chr3R 26229262 26229774 -1675279 + ROO_I LTR Pao 7744 8256 0 5 785 4017 0 0 0 chr3R 26229774 26230202 -1674851 + ROO_LTR LTR Pao 1 428 0 5 785 23 0 0 0 chr3R 26243140 26243163 -1661890 + AT_rich Low_complexity Low_complexity 1 23 0 5 785 578 226 23 23 chr3R 26248463 26248635 -1656418 - Baggins1 LINE LOA -5235 218 47 5 785 210 71 0 0 chr3R 26260869 26260897 -1644156 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 785 34 72 0 0 chr3R 26281905 26281974 -1623079 + AT_rich Low_complexity Low_complexity 1 69 0 5 785 210 91 0 0 chr3R 26282399 26282432 -1622621 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 785 234 91 0 0 chr3R 26287708 26287741 -1617312 + (TTA)n Simple_repeat Simple_repeat 2 34 0 5 785 231 169 0 38 chr3R 26302748 26302828 -1602225 + ROO_I LTR Pao 639 715 -7541 5 785 3143 0 0 3 chr3R 26306264 26306616 -1598437 - LINEJ1_DM LINE Jockey 0 5020 4670 5 785 18903 9 1 0 chr3R 26306616 26308661 -1596392 - LINEJ1_DM LINE Jockey -2969 2051 6 5 785 33 43 0 0 chr3R 26317679 26317726 -1587327 + AT_rich Low_complexity Low_complexity 1 47 0 5 785 204 40 0 0 chr3R 26322746 26322771 -1582282 + (TTAG)n Simple_repeat Simple_repeat 3 27 0 5 785 180 0 0 0 chr3R 26326727 26326747 -1578306 + (CAAA)n Simple_repeat Simple_repeat 4 23 0 5 785 27 29 0 0 chr3R 26333660 26333694 -1571359 + AT_rich Low_complexity Low_complexity 1 34 0 5 785 212 250 0 0 chr3R 26343257 26343321 -1561732 + T-rich Low_complexity Low_complexity 1 64 0 5 786 211 277 12 12 chr3R 26348003 26348087 -1556966 + (TG)n Simple_repeat Simple_repeat 1 84 0 5 786 180 200 0 0 chr3R 26357027 26357072 -1547981 + A-rich Low_complexity Low_complexity 2 46 0 5 786 21 0 0 0 chr3R 26359489 26359510 -1545543 + AT_rich Low_complexity Low_complexity 1 21 0 5 786 239 152 43 0 chr3R 26359576 26359622 -1545431 + Gypsy_I LTR Gypsy 184 231 -6276 5 786 183 42 0 0 chr3R 26360294 26360318 -1544735 + (A)n Simple_repeat Simple_repeat 1 24 0 5 786 30 69 0 0 chr3R 26366865 26366923 -1538130 + AT_rich Low_complexity Low_complexity 1 58 0 5 786 606 270 47 34 chr3R 26369393 26369773 -1535280 - SAR_DM Satellite Satellite -860 612 228 5 786 333 289 34 27 chr3R 26369645 26369791 -1535262 + XDMR Unknown Unknown 1 147 -214 5 786 180 0 0 0 chr3R 26369995 26370015 -1535038 + (CCCCCT)n Simple_repeat Simple_repeat 6 25 0 5 786 24 32 0 0 chr3R 26370752 26370783 -1534270 + AT_rich Low_complexity Low_complexity 1 31 0 5 786 32 0 0 0 chr3R 26374095 26374127 -1530926 + AT_rich Low_complexity Low_complexity 1 32 0 5 786 27 49 0 0 chr3R 26377178 26377219 -1527834 + AT_rich Low_complexity Low_complexity 1 41 0 5 786 24 32 0 0 chr3R 26379024 26379055 -1525998 + AT_rich Low_complexity Low_complexity 1 31 0 5 786 24 0 0 0 chr3R 26383929 26383953 -1521100 + AT_rich Low_complexity Low_complexity 1 24 0 5 786 198 0 0 0 chr3R 26385074 26385096 -1519957 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 786 208 147 0 0 chr3R 26385314 26385348 -1519705 + (CAGT)n Simple_repeat Simple_repeat 1 34 0 5 786 29 0 0 0 chr3R 26387993 26388022 -1517031 + AT_rich Low_complexity Low_complexity 1 29 0 5 786 24 0 0 0 chr3R 26389761 26389785 -1515268 + AT_rich Low_complexity Low_complexity 1 24 0 5 786 24 32 0 0 chr3R 26390701 26390732 -1514321 + AT_rich Low_complexity Low_complexity 1 31 0 5 786 396 118 0 0 chr3R 26396650 26396718 -1508335 + (ACTG)n Simple_repeat Simple_repeat 4 71 0 5 786 23 33 0 0 chr3R 26399649 26399679 -1505374 + AT_rich Low_complexity Low_complexity 1 30 0 5 786 23 0 0 0 chr3R 26401329 26401352 -1503701 + AT_rich Low_complexity Low_complexity 1 23 0 5 786 24 53 0 0 chr3R 26401977 26402015 -1503038 + AT_rich Low_complexity Low_complexity 1 38 0 5 786 218 226 0 16 chr3R 26403102 26403165 -1501888 + (CAA)n Simple_repeat Simple_repeat 1 62 0 5 786 198 0 0 0 chr3R 26404234 26404256 -1500797 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 5 786 301 193 35 24 chr3R 26404333 26404418 -1500635 + (CATA)n Simple_repeat Simple_repeat 3 88 0 5 786 33 80 0 0 chr3R 26404565 26404640 -1500413 + AT_rich Low_complexity Low_complexity 1 75 0 5 786 22 0 0 0 chr3R 26405799 26405821 -1499232 + AT_rich Low_complexity Low_complexity 1 22 0 5 786 24 0 0 0 chr3R 26415931 26415955 -1489098 + AT_rich Low_complexity Low_complexity 1 24 0 5 786 21 0 0 0 chr3R 26433741 26433762 -1471291 + AT_rich Low_complexity Low_complexity 1 21 0 5 786 23 0 0 0 chr3R 26441432 26441455 -1463598 + AT_rich Low_complexity Low_complexity 1 23 0 5 786 235 49 0 47 chr3R 26443165 26443208 -1461845 + (GA)n Simple_repeat Simple_repeat 1 41 0 5 786 21 36 0 0 chr3R 26447329 26447357 -1457696 + AT_rich Low_complexity Low_complexity 1 28 0 5 786 192 40 0 0 chr3R 26448271 26448296 -1456757 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 786 23 0 0 0 chr3R 26450481 26450504 -1454549 + AT_rich Low_complexity Low_complexity 1 23 0 5 786 559 244 6 6 chr3R 26455791 26455952 -1449101 + XDMR_DM Unknown Unknown 189 349 -11 5 786 524 247 47 39 chr3R 26455797 26456029 -1449024 - SAR_DM Satellite Satellite -620 852 619 5 786 319 230 0 0 chr3R 26455969 26456043 -1449010 + XDMR_DM Unknown Unknown 7 80 -280 5 786 24 32 0 0 chr3R 26459243 26459274 -1445779 + AT_rich Low_complexity Low_complexity 1 31 0 5 787 210 71 0 0 chr3R 26487311 26487339 -1417714 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 787 24 0 0 0 chr3R 26489172 26489196 -1415857 + AT_rich Low_complexity Low_complexity 1 24 0 5 787 258 32 0 0 chr3R 26491062 26491093 -1413960 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 787 21 0 0 0 chr3R 26491501 26491522 -1413531 + AT_rich Low_complexity Low_complexity 1 21 0 5 787 180 0 0 0 chr3R 26492024 26492044 -1413009 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 787 216 0 0 0 chr3R 26493402 26493426 -1411627 + (CATCG)n Simple_repeat Simple_repeat 2 25 0 5 787 219 236 0 0 chr3R 26495109 26495164 -1409889 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 787 198 171 0 0 chr3R 26496859 26496900 -1408153 + (TTCA)n Simple_repeat Simple_repeat 2 42 0 5 787 192 97 0 0 chr3R 26499640 26499671 -1405382 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 787 3766 0 0 0 chr3R 26505295 26505694 -1399359 + BLOOD_LTR LTR Gypsy 1 399 0 5 787 60199 0 0 1 chr3R 26505694 26512308 -1392745 + BLOOD_I LTR Gypsy 1 6613 0 5 787 3766 0 0 0 chr3R 26512308 26512707 -1392346 + BLOOD_LTR LTR Gypsy 1 399 0 5 787 22 0 0 0 chr3R 26515588 26515610 -1389443 + AT_rich Low_complexity Low_complexity 1 22 0 5 787 22 70 0 0 chr3R 26529366 26529409 -1375644 + AT_rich Low_complexity Low_complexity 1 43 0 5 787 24 0 0 0 chr3R 26536549 26536573 -1368480 + AT_rich Low_complexity Low_complexity 1 24 0 5 787 227 208 55 14 chr3R 26540542 26540615 -1364438 + ROO_I LTR Pao 661 736 -7520 5 787 195 42 0 0 chr3R 26540897 26540921 -1364132 + (TATAG)n Simple_repeat Simple_repeat 2 25 0 5 787 189 0 0 0 chr3R 26542983 26543004 -1362049 + (CATATA)n Simple_repeat Simple_repeat 5 25 0 5 787 216 239 0 0 chr3R 26543391 26543437 -1361616 + C-rich Low_complexity Low_complexity 4 49 0 5 787 25 31 0 0 chr3R 26558918 26558950 -1346103 + AT_rich Low_complexity Low_complexity 1 32 0 5 787 29 70 0 0 chr3R 26560513 26560570 -1344483 + AT_rich Low_complexity Low_complexity 1 57 0 5 787 240 35 0 0 chr3R 26561857 26561886 -1343167 + (TGGA)n Simple_repeat Simple_repeat 4 32 0 5 787 21 36 0 0 chr3R 26563690 26563718 -1341335 + AT_rich Low_complexity Low_complexity 1 28 0 5 787 22 0 0 0 chr3R 26567704 26567726 -1337327 + AT_rich Low_complexity Low_complexity 1 22 0 5 787 21 0 0 0 chr3R 26579070 26579091 -1325962 + AT_rich Low_complexity Low_complexity 1 21 0 5 787 234 91 0 0 chr3R 26580157 26580190 -1324863 + (TATAG)n Simple_repeat Simple_repeat 3 35 0 5 787 207 265 0 0 chr3R 26580227 26580276 -1324777 + (GCTTG)n Simple_repeat Simple_repeat 5 53 0 5 787 21 0 0 0 chr3R 26585102 26585123 -1319930 + AT_rich Low_complexity Low_complexity 1 21 0 5 787 24 32 0 0 chr3R 26587358 26587389 -1317664 + AT_rich Low_complexity Low_complexity 1 31 0 5 787 180 125 0 0 chr3R 26587926 26587958 -1317095 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 787 217 68 45 0 chr3R 26588939 26588983 -1316070 + (CCA)n Simple_repeat Simple_repeat 3 48 0 5 787 276 100 0 0 chr3R 26593550 26593590 -1311463 + (CAGC)n Simple_repeat Simple_repeat 3 42 0 5 787 216 104 0 115 chr3R 26595707 26595794 -1309259 + (CAG)n Simple_repeat Simple_repeat 3 79 0 5 787 186 43 0 0 chr3R 26596223 26596246 -1308807 + (ATTCG)n Simple_repeat Simple_repeat 5 27 0 5 787 219 146 0 0 chr3R 26596396 26596437 -1308616 + (T)n Simple_repeat Simple_repeat 1 41 0 5 787 201 121 0 0 chr3R 26598863 26598896 -1306157 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 5 787 265 267 0 0 chr3R 26599793 26599920 -1305133 + (CAA)n Simple_repeat Simple_repeat 1 127 0 5 787 354 107 0 0 chr3R 26600110 26600166 -1304887 + (CAG)n Simple_repeat Simple_repeat 1 56 0 5 787 225 0 0 0 chr3R 26601088 26601113 -1303940 + (A)n Simple_repeat Simple_repeat 1 25 0 5 787 249 83 0 0 chr3R 26601503 26601539 -1303514 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 787 189 0 0 0 chr3R 26603742 26603763 -1301290 + (CAT)n Simple_repeat Simple_repeat 1 21 0 5 787 273 128 0 0 chr3R 26607002 26607049 -1298004 + (TCCG)n Simple_repeat Simple_repeat 3 49 0 5 788 204 220 0 0 chr3R 26610264 26610314 -1294739 + (CAG)n Simple_repeat Simple_repeat 1 50 0 5 788 211 191 0 0 chr3R 26610720 26610762 -1294291 + GA-rich Low_complexity Low_complexity 2 43 0 5 788 255 79 0 0 chr3R 26612099 26612137 -1292916 + (CAG)n Simple_repeat Simple_repeat 1 38 0 5 788 240 111 0 0 chr3R 26614077 26614113 -1290940 + (TA)n Simple_repeat Simple_repeat 2 37 0 5 788 40 49 0 0 chr3R 26614936 26614997 -1290056 + AT_rich Low_complexity Low_complexity 1 61 0 5 788 241 100 20 20 chr3R 26616462 26616513 -1288540 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 788 213 183 13 53 chr3R 26618606 26618681 -1286372 + (TTG)n Simple_repeat Simple_repeat 2 73 0 5 788 497 102 0 33 chr3R 26618819 26618910 -1286143 + (CTG)n Simple_repeat Simple_repeat 3 90 0 5 788 229 111 0 53 chr3R 26619024 26619081 -1285972 + (CTG)n Simple_repeat Simple_repeat 3 56 0 5 788 230 302 0 22 chr3R 26620561 26620645 -1284408 + GA-rich Low_complexity Low_complexity 1 82 0 5 788 22 0 0 0 chr3R 26621066 26621088 -1283965 + AT_rich Low_complexity Low_complexity 1 22 0 5 788 219 187 64 39 chr3R 26623185 26623263 -1281790 + A-rich Low_complexity Low_complexity 1 80 0 5 788 222 37 0 0 chr3R 26625965 26625992 -1279061 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 788 183 42 0 0 chr3R 26626040 26626064 -1278989 + (TTA)n Simple_repeat Simple_repeat 2 25 0 5 788 22 0 0 0 chr3R 26626900 26626922 -1278131 + AT_rich Low_complexity Low_complexity 1 22 0 5 788 198 174 0 0 chr3R 26629048 26629094 -1275959 + GA-rich Low_complexity Low_complexity 1 46 0 5 788 233 185 0 15 chr3R 26630014 26630080 -1274973 + (CAA)n Simple_repeat Simple_repeat 1 65 0 5 788 264 59 0 0 chr3R 26630226 26630260 -1274793 + (TAG)n Simple_repeat Simple_repeat 1 34 0 5 788 221 257 0 39 chr3R 26631840 26631917 -1273136 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 788 189 94 0 0 chr3R 26634789 26634821 -1270232 + (A)n Simple_repeat Simple_repeat 1 32 0 5 788 287 113 0 19 chr3R 26637320 26637374 -1267679 + (TTTTTA)n Simple_repeat Simple_repeat 2 54 0 5 788 204 40 0 0 chr3R 26638059 26638084 -1266969 + (TGGA)n Simple_repeat Simple_repeat 3 27 0 5 788 26 30 0 0 chr3R 26642332 26642365 -1262688 + AT_rich Low_complexity Low_complexity 1 33 0 5 788 231 300 10 0 chr3R 26643616 26643716 -1261337 + (CAG)n Simple_repeat Simple_repeat 2 102 0 5 788 5680 26 25 1 chr3R 26644589 26645274 -1259779 + PROTOP DNA P 1 701 -3779 5 788 910 0 0 0 chr3R 26645274 26645377 -1259676 + PROTOP DNA P 1956 2058 -2422 5 788 6285 15 0 0 chr3R 26645378 26646094 -1258959 + PROTOP DNA P 3765 4480 0 5 788 180 152 0 0 chr3R 26649479 26649512 -1255541 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 5 788 219 175 0 0 chr3R 26656834 26656891 -1248162 + (CAACT)n Simple_repeat Simple_repeat 4 60 0 5 788 24 0 0 0 chr3R 26657636 26657660 -1247393 + AT_rich Low_complexity Low_complexity 1 24 0 5 788 22 35 0 0 chr3R 26659044 26659073 -1245980 + AT_rich Low_complexity Low_complexity 1 29 0 5 788 26 50 0 0 chr3R 26660439 26660479 -1244574 + AT_rich Low_complexity Low_complexity 1 40 0 5 788 203 204 0 22 chr3R 26662621 26662666 -1242387 + (TTGG)n Simple_repeat Simple_repeat 3 46 0 5 788 267 162 108 36 chr3R 26665581 26665664 -1239389 + ROO_I LTR Pao 631 719 -7537 5 788 207 0 0 0 chr3R 26666477 26666500 -1238553 + (TGG)n Simple_repeat Simple_repeat 2 24 0 5 788 25 0 0 0 chr3R 26669040 26669065 -1235988 + AT_rich Low_complexity Low_complexity 1 25 0 5 788 26 0 0 0 chr3R 26670786 26670812 -1234241 + AT_rich Low_complexity Low_complexity 1 26 0 5 788 35 41 0 0 chr3R 26677064 26677113 -1227940 + AT_rich Low_complexity Low_complexity 1 49 0 5 788 28 48 0 0 chr3R 26681604 26681646 -1223407 + AT_rich Low_complexity Low_complexity 1 42 0 5 788 246 174 0 0 chr3R 26685158 26685204 -1219849 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 5 788 273 220 65 41 chr3R 26694172 26694295 -1210758 + (CCCCAG)n Simple_repeat Simple_repeat 2 127 0 5 788 211 225 0 66 chr3R 26695560 26695636 -1209417 + T-rich Low_complexity Low_complexity 1 71 0 5 788 21 0 0 0 chr3R 26696214 26696235 -1208818 + AT_rich Low_complexity Low_complexity 1 21 0 5 788 252 186 14 14 chr3R 26700349 26700420 -1204633 - ROO_I LTR Pao -7543 713 643 5 788 22 0 0 0 chr3R 26700869 26700891 -1204162 + AT_rich Low_complexity Low_complexity 1 22 0 5 788 186 43 0 0 chr3R 26700927 26700950 -1204103 + (CTG)n Simple_repeat Simple_repeat 1 23 0 5 788 27 0 0 0 chr3R 26702802 26702829 -1202224 + AT_rich Low_complexity Low_complexity 1 27 0 5 788 303 71 0 0 chr3R 26703422 26703464 -1201589 + (CTG)n Simple_repeat Simple_repeat 1 42 0 5 788 336 134 0 58 chr3R 26703934 26704021 -1201032 - ROO_I LTR Pao -7532 724 643 5 788 242 176 0 0 chr3R 26704040 26704108 -1200945 - ROO_I LTR Pao -7533 723 656 5 788 510 61 0 0 chr3R 26705380 26705446 -1199607 + (CTG)n Simple_repeat Simple_repeat 3 68 0 5 788 203 171 0 0 chr3R 26705447 26705482 -1199571 + (TTG)n Simple_repeat Simple_repeat 1 35 0 5 788 24 53 0 0 chr3R 26705634 26705672 -1199381 + AT_rich Low_complexity Low_complexity 1 38 0 5 788 201 175 25 0 chr3R 26706904 26706944 -1198109 + CT-rich Low_complexity Low_complexity 1 41 0 5 788 29 0 0 0 chr3R 26721728 26721757 -1183296 + AT_rich Low_complexity Low_complexity 1 29 0 5 788 234 81 0 0 chr3R 26728484 26728521 -1176532 + (TAGA)n Simple_repeat Simple_repeat 2 38 0 5 788 23 33 0 0 chr3R 26730553 26730583 -1174470 + AT_rich Low_complexity Low_complexity 1 30 0 5 788 213 171 0 24 chr3R 26731308 26731350 -1173703 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 788 22 0 0 0 chr3R 26731563 26731585 -1173468 + AT_rich Low_complexity Low_complexity 1 22 0 5 788 22 35 0 0 chr3R 26737279 26737308 -1167745 + AT_rich Low_complexity Low_complexity 1 29 0 5 788 207 179 0 0 chr3R 26738173 26738212 -1166841 + GA-rich Low_complexity Low_complexity 5 43 0 5 789 22 0 0 0 chr3R 26739955 26739977 -1165076 + AT_rich Low_complexity Low_complexity 1 22 0 5 789 195 69 0 0 chr3R 26740745 26740774 -1164279 + (TTTCG)n Simple_repeat Simple_repeat 4 32 0 5 789 247 219 16 0 chr3R 26745046 26745110 -1159943 + A-rich Low_complexity Low_complexity 2 66 0 5 789 21 36 0 0 chr3R 26745504 26745532 -1159521 + AT_rich Low_complexity Low_complexity 1 28 0 5 789 258 183 0 0 chr3R 26753546 26753617 -1151436 + (ATGGTG)n Simple_repeat Simple_repeat 3 73 0 5 789 216 97 0 0 chr3R 26755707 26755738 -1149315 + (CAA)n Simple_repeat Simple_repeat 1 31 0 5 789 237 65 0 0 chr3R 26756274 26756305 -1148748 + (TATATG)n Simple_repeat Simple_repeat 2 32 0 5 789 294 73 0 0 chr3R 26757400 26757441 -1147612 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 789 21 0 0 0 chr3R 26757501 26757522 -1147531 + AT_rich Low_complexity Low_complexity 1 21 0 5 789 21 36 0 0 chr3R 26758956 26758984 -1146069 + AT_rich Low_complexity Low_complexity 1 28 0 5 789 211 143 0 23 chr3R 26769292 26769335 -1135718 + (TTAAA)n Simple_repeat Simple_repeat 3 44 0 5 789 319 320 38 30 chr3R 26772648 26772915 -1132138 - XDMR Unknown Unknown -92 269 1 5 789 470 252 42 38 chr3R 26772754 26772993 -1132060 + SAR_DM Satellite Satellite 194 433 -1039 5 789 192 77 0 0 chr3R 26776232 26776258 -1128795 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 789 21 0 0 0 chr3R 26794060 26794081 -1110972 + AT_rich Low_complexity Low_complexity 1 21 0 5 789 37 0 0 0 chr3R 26801368 26801405 -1103648 + AT_rich Low_complexity Low_complexity 1 37 0 5 789 21 57 0 0 chr3R 26802988 26803023 -1102030 + AT_rich Low_complexity Low_complexity 1 35 0 5 789 206 200 67 0 chr3R 26803728 26803788 -1101265 + (CAG)n Simple_repeat Simple_repeat 1 64 0 5 789 23 0 0 0 chr3R 26804157 26804180 -1100873 + AT_rich Low_complexity Low_complexity 1 23 0 5 789 26 30 0 0 chr3R 26805704 26805737 -1099316 + AT_rich Low_complexity Low_complexity 1 33 0 5 789 189 0 0 0 chr3R 26807049 26807070 -1097983 + (CATTT)n Simple_repeat Simple_repeat 1 21 0 5 789 27 0 0 0 chr3R 26808274 26808301 -1096752 + AT_rich Low_complexity Low_complexity 1 27 0 5 789 22 0 0 0 chr3R 26809733 26809755 -1095298 + AT_rich Low_complexity Low_complexity 1 22 0 5 789 258 32 0 0 chr3R 26812841 26812872 -1092181 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 789 23 33 0 0 chr3R 26817391 26817421 -1087632 + AT_rich Low_complexity Low_complexity 1 30 0 5 789 23 33 0 0 chr3R 26823493 26823523 -1081530 + AT_rich Low_complexity Low_complexity 1 30 0 5 789 217 143 35 18 chr3R 26837914 26837971 -1067082 + (TTA)n Simple_repeat Simple_repeat 2 59 0 5 789 25 0 0 0 chr3R 26845533 26845558 -1059495 + AT_rich Low_complexity Low_complexity 1 25 0 5 789 186 133 0 0 chr3R 26851215 26851245 -1053808 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 5 789 204 267 0 0 chr3R 26858006 26858066 -1046987 + (CACTC)n Simple_repeat Simple_repeat 2 61 0 5 789 25 31 0 0 chr3R 26861628 26861660 -1043393 + AT_rich Low_complexity Low_complexity 1 32 0 5 789 27 29 0 0 chr3R 26864491 26864525 -1040528 + AT_rich Low_complexity Low_complexity 1 34 0 5 789 180 158 0 0 chr3R 26864665 26864703 -1040350 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 789 254 347 0 0 chr3R 26864732 26864807 -1040246 + G-rich Low_complexity Low_complexity 1 75 0 5 789 31 0 0 0 chr3R 26865795 26865826 -1039227 + AT_rich Low_complexity Low_complexity 1 31 0 5 790 777 64 34 68 chr3R 26871474 26871591 -1033462 - DNAREP1_DM LINE Penelope -105 489 377 5 790 339 175 28 55 chr3R 26871893 26872002 -1033051 + ROO_I LTR Pao 638 743 -7513 5 790 21 0 0 0 chr3R 26873613 26873634 -1031419 + AT_rich Low_complexity Low_complexity 1 21 0 5 790 21 36 0 0 chr3R 26874346 26874374 -1030679 + AT_rich Low_complexity Low_complexity 1 28 0 5 790 690 24 0 0 chr3R 26881262 26881346 -1023707 + (TA)n Simple_repeat Simple_repeat 1 84 0 5 790 215 211 14 40 chr3R 26882267 26882341 -1022712 + (CCG)n Simple_repeat Simple_repeat 3 74 0 5 790 223 261 15 0 chr3R 26882554 26882619 -1022434 + (CTG)n Simple_repeat Simple_repeat 3 68 0 5 790 240 35 0 0 chr3R 26885399 26885428 -1019625 + (TC)n Simple_repeat Simple_repeat 1 29 0 5 790 22 35 0 0 chr3R 26889081 26889110 -1015943 + AT_rich Low_complexity Low_complexity 1 29 0 5 790 213 106 0 78 chr3R 26892016 26892067 -1012986 + G-rich Low_complexity Low_complexity 2 48 0 5 790 297 109 0 0 chr3R 26897506 26897552 -1007501 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 790 182 156 22 0 chr3R 26899099 26899144 -1005909 + (CTATA)n Simple_repeat Simple_repeat 1 46 0 5 790 2171 116 57 62 chr3R 26900005 26900411 -1004642 - Gypsy6_LTR LTR Gypsy -3 404 1 5 790 22907 231 21 23 chr3R 26900413 26907128 -997925 - Gypsy6_I LTR Gypsy 0 7012 27 5 790 2161 118 62 55 chr3R 26907144 26907548 -997505 - Gypsy6_LTR LTR Gypsy 0 407 1 5 790 180 163 0 0 chr3R 26908762 26908805 -996248 + (CAG)n Simple_repeat Simple_repeat 3 45 0 5 790 24 0 0 0 chr3R 26909094 26909118 -995935 + AT_rich Low_complexity Low_complexity 1 24 0 5 790 23 0 0 0 chr3R 26910098 26910121 -994932 + AT_rich Low_complexity Low_complexity 1 23 0 5 790 24 0 0 0 chr3R 26910185 26910209 -994844 + AT_rich Low_complexity Low_complexity 1 24 0 5 790 205 242 0 0 chr3R 26912583 26912649 -992404 + (CTG)n Simple_repeat Simple_repeat 1 66 0 5 790 216 0 0 0 chr3R 26923993 26924017 -981036 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 790 180 0 0 0 chr3R 26926939 26926959 -978094 + (TTA)n Simple_repeat Simple_repeat 3 22 0 5 790 29 0 0 62 chr3R 26926999 26927047 -978006 + AT_rich Low_complexity Low_complexity 1 45 0 5 790 22 0 0 0 chr3R 26928809 26928831 -976222 + AT_rich Low_complexity Low_complexity 1 22 0 5 790 205 195 0 0 chr3R 26931000 26931041 -974012 + (CATTT)n Simple_repeat Simple_repeat 1 41 0 5 790 21 36 0 0 chr3R 26932142 26932170 -972883 + AT_rich Low_complexity Low_complexity 1 28 0 5 790 27 29 0 0 chr3R 26932192 26932226 -972827 + AT_rich Low_complexity Low_complexity 1 34 0 5 790 23 54 0 0 chr3R 26935305 26935342 -969711 + AT_rich Low_complexity Low_complexity 1 37 0 5 790 25 31 0 0 chr3R 26938955 26938987 -966066 + AT_rich Low_complexity Low_complexity 1 32 0 5 790 279 0 0 0 chr3R 26945930 26945961 -959092 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 790 22 0 0 0 chr3R 26952323 26952345 -952708 + AT_rich Low_complexity Low_complexity 1 22 0 5 790 23 0 0 0 chr3R 26958734 26958757 -946296 + AT_rich Low_complexity Low_complexity 1 23 0 5 790 33 80 0 0 chr3R 26959731 26959806 -945247 + AT_rich Low_complexity Low_complexity 1 75 0 5 790 335 174 60 49 chr3R 26970613 26970766 -934287 + SAR_DM Satellite Satellite 1 154 -677 5 790 234 173 64 55 chr3R 26970689 26970799 -934254 - XDMR Unknown Unknown -2 359 249 5 790 212 167 0 0 chr3R 26971639 26971675 -933378 + (ATG)n Simple_repeat Simple_repeat 3 38 0 5 790 21 89 0 0 chr3R 26972046 26972102 -932951 + AT_rich Low_complexity Low_complexity 1 56 0 5 790 219 103 0 0 chr3R 26975877 26975916 -929137 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 5 790 227 349 0 0 chr3R 26977580 26977666 -927387 + (CAA)n Simple_repeat Simple_repeat 2 87 0 5 790 260 105 53 0 chr3R 26982108 26982184 -922869 + (TA)n Simple_repeat Simple_repeat 2 81 0 5 790 180 231 0 0 chr3R 26992951 26993003 -912050 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 790 195 42 0 0 chr3R 26994678 26994702 -910351 + (ATTCG)n Simple_repeat Simple_repeat 3 26 0 5 790 180 0 0 0 chr3R 26997018 26997038 -908015 + (GGA)n Simple_repeat Simple_repeat 3 22 0 5 790 207 0 0 0 chr3R 26999399 26999422 -905631 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 791 216 0 0 0 chr3R 27001538 27001562 -903491 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 791 23 33 0 0 chr3R 27016519 27016549 -888504 + AT_rich Low_complexity Low_complexity 1 30 0 5 791 255 258 0 0 chr3R 27019451 27019517 -885536 + (CAG)n Simple_repeat Simple_repeat 1 66 0 5 791 23 33 0 0 chr3R 27020100 27020130 -884923 + AT_rich Low_complexity Low_complexity 1 30 0 5 791 237 33 0 0 chr3R 27020584 27020614 -884439 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 791 31 44 0 0 chr3R 27022250 27022295 -882758 + AT_rich Low_complexity Low_complexity 1 45 0 5 791 198 171 0 0 chr3R 27025363 27025404 -879649 + (CATCC)n Simple_repeat Simple_repeat 3 43 0 5 791 21 0 0 0 chr3R 27031021 27031042 -874011 + AT_rich Low_complexity Low_complexity 1 21 0 5 791 180 0 0 0 chr3R 27042548 27042568 -862485 + (CAAT)n Simple_repeat Simple_repeat 3 22 0 5 791 23 68 0 0 chr3R 27045579 27045623 -859430 + AT_rich Low_complexity Low_complexity 1 44 0 5 791 21 57 0 0 chr3R 27045959 27045994 -859059 + AT_rich Low_complexity Low_complexity 1 35 0 5 791 58 28 0 0 chr3R 27046059 27046131 -858922 + AT_rich Low_complexity Low_complexity 1 72 0 5 791 23 0 0 0 chr3R 27046202 27046225 -858828 + AT_rich Low_complexity Low_complexity 1 23 0 5 791 252 111 0 0 chr3R 27048840 27048885 -856168 + (TGGA)n Simple_repeat Simple_repeat 1 45 0 5 791 297 118 0 0 chr3R 27052726 27052777 -852276 + (CAG)n Simple_repeat Simple_repeat 3 53 0 5 791 405 133 0 0 chr3R 27053215 27053290 -851763 + (CAG)n Simple_repeat Simple_repeat 3 77 0 5 791 221 242 0 15 chr3R 27053315 27053382 -851671 + (CAG)n Simple_repeat Simple_repeat 2 67 0 5 791 226 174 22 0 chr3R 27054179 27054225 -850828 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 5 791 210 91 0 0 chr3R 27055109 27055142 -849911 + (A)n Simple_repeat Simple_repeat 1 33 0 5 791 21 36 0 0 chr3R 27055299 27055327 -849726 + AT_rich Low_complexity Low_complexity 1 28 0 5 791 28 0 0 0 chr3R 27057143 27057171 -847882 + AT_rich Low_complexity Low_complexity 1 28 0 5 791 192 40 0 0 chr3R 27062878 27062903 -842150 + (TTA)n Simple_repeat Simple_repeat 2 26 0 5 791 274 294 0 0 chr3R 27069145 27069213 -835840 + (CAGT)n Simple_repeat Simple_repeat 1 68 0 5 791 204 111 0 0 chr3R 27069428 27069464 -835589 + (CAT)n Simple_repeat Simple_repeat 1 36 0 5 791 22 35 0 0 chr3R 27082285 27082314 -822739 + AT_rich Low_complexity Low_complexity 1 29 0 5 791 204 67 0 0 chr3R 27087667 27087697 -817356 + (TAG)n Simple_repeat Simple_repeat 2 31 0 5 791 21 36 0 0 chr3R 27087860 27087888 -817165 + AT_rich Low_complexity Low_complexity 1 28 0 5 791 24 0 0 0 chr3R 27098094 27098118 -806935 + AT_rich Low_complexity Low_complexity 1 24 0 5 791 23 0 0 0 chr3R 27101511 27101534 -803519 + AT_rich Low_complexity Low_complexity 1 23 0 5 791 23 0 0 0 chr3R 27102303 27102326 -802727 + AT_rich Low_complexity Low_complexity 1 23 0 5 791 2053 5 0 0 chr3R 27105152 27105376 -799677 + DIVER_LTR LTR Pao 1 224 0 5 791 52742 2 0 0 chr3R 27105397 27111040 -794013 + DIVER_I LTR Pao 1 5643 0 5 791 2053 5 0 0 chr3R 27111040 27111264 -793789 + DIVER_LTR LTR Pao 1 224 0 5 791 21 0 0 0 chr3R 27111691 27111712 -793341 + AT_rich Low_complexity Low_complexity 1 21 0 5 791 300 53 0 0 chr3R 27113227 27113265 -791788 + (CAATT)n Simple_repeat Simple_repeat 5 42 0 5 791 327 104 0 0 chr3R 27117003 27117051 -788002 + (CAGA)n Simple_repeat Simple_repeat 1 48 0 5 791 213 108 0 0 chr3R 27117844 27117881 -787172 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 5 791 186 71 0 0 chr3R 27119439 27119467 -785586 + (CAGTT)n Simple_repeat Simple_repeat 1 28 0 5 791 201 152 0 0 chr3R 27125307 27125340 -779713 + (GTGTG)n Simple_repeat Simple_repeat 3 35 0 5 791 242 186 0 0 chr3R 27126197 27126240 -778813 + (TCTCTG)n Simple_repeat Simple_repeat 1 43 0 5 791 23 33 0 0 chr3R 27126651 27126681 -778372 + AT_rich Low_complexity Low_complexity 1 30 0 5 792 205 233 67 0 chr3R 27132933 27132993 -772060 + (CCCGAA)n Simple_repeat Simple_repeat 4 67 0 5 792 183 156 0 0 chr3R 27133842 27133874 -771179 + T-rich Low_complexity Low_complexity 4 35 0 5 792 198 0 0 0 chr3R 27135515 27135537 -769516 + (ATG)n Simple_repeat Simple_repeat 3 24 0 5 792 25 0 0 0 chr3R 27136540 27136565 -768488 + AT_rich Low_complexity Low_complexity 1 25 0 5 792 204 67 0 0 chr3R 27138330 27138360 -766693 + (CTG)n Simple_repeat Simple_repeat 1 30 0 5 792 201 74 0 0 chr3R 27141739 27141766 -763287 + (TAGA)n Simple_repeat Simple_repeat 3 29 0 5 792 208 147 0 0 chr3R 27147451 27147485 -757568 + (A)n Simple_repeat Simple_repeat 1 34 0 5 792 2442 0 0 0 chr3R 27156212 27156488 -748565 + Copia_LTR LTR Copia 1 276 0 5 792 41743 1 0 0 chr3R 27156488 27161080 -743973 + Copia_I LTR Copia 1 4593 0 5 792 2442 0 0 0 chr3R 27161080 27161356 -743697 + Copia_LTR LTR Copia 1 276 0 5 792 192 97 0 0 chr3R 27162891 27162922 -742131 + (GCCTG)n Simple_repeat Simple_repeat 1 31 0 5 792 279 130 0 0 chr3R 27164598 27164652 -740401 + (CTG)n Simple_repeat Simple_repeat 3 56 0 5 792 201 74 0 0 chr3R 27165869 27165896 -739157 + (ATG)n Simple_repeat Simple_repeat 1 27 0 5 792 225 0 0 0 chr3R 27166383 27166408 -738645 + (CAT)n Simple_repeat Simple_repeat 1 25 0 5 792 23 54 0 0 chr3R 27169050 27169087 -735966 + AT_rich Low_complexity Low_complexity 1 37 0 5 792 204 185 0 0 chr3R 27169796 27169850 -735203 + (CAGTT)n Simple_repeat Simple_repeat 4 57 0 5 792 220 216 0 0 chr3R 27172800 27172851 -732202 + A-rich Low_complexity Low_complexity 1 51 0 5 792 210 118 0 0 chr3R 27172852 27172886 -732167 + (CGAGT)n Simple_repeat Simple_repeat 1 34 0 5 792 189 196 0 0 chr3R 27192750 27192796 -712257 + (CAA)n Simple_repeat Simple_repeat 2 47 0 5 792 225 154 0 0 chr3R 27192976 27193015 -712038 + (CCCGAA)n Simple_repeat Simple_repeat 3 41 0 5 792 189 0 0 0 chr3R 27193119 27193140 -711913 + (CAG)n Simple_repeat Simple_repeat 3 23 0 5 792 231 299 0 0 chr3R 27195712 27195779 -709274 + (CATATA)n Simple_repeat Simple_repeat 3 69 0 5 792 483 138 0 0 chr3R 27196103 27196190 -708863 + (CAG)n Simple_repeat Simple_repeat 3 89 0 5 792 270 152 0 0 chr3R 27196716 27196775 -708278 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 792 207 108 27 0 chr3R 27197481 27197518 -707535 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 792 254 246 0 0 chr3R 27200435 27200500 -704553 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 792 25 65 0 0 chr3R 27206886 27206932 -698121 + AT_rich Low_complexity Low_complexity 1 46 0 5 792 27 49 0 0 chr3R 27217520 27217561 -687492 + AT_rich Low_complexity Low_complexity 1 41 0 5 792 21 57 0 0 chr3R 27224226 27224261 -680792 + AT_rich Low_complexity Low_complexity 1 35 0 5 792 216 250 13 26 chr3R 27231215 27231293 -673760 + (TG)n Simple_repeat Simple_repeat 1 77 0 5 792 183 80 0 0 chr3R 27238249 27238274 -666779 + (CAGCT)n Simple_repeat Simple_repeat 5 29 0 5 792 2405 0 4 0 chr3R 27238866 27239141 -665912 - Copia_LTR LTR Copia 0 276 1 5 792 41577 3 0 0 chr3R 27239141 27243733 -661320 - Copia_I LTR Copia 0 4593 1 5 792 2405 0 4 0 chr3R 27243733 27244008 -661045 - Copia_LTR LTR Copia 0 276 1 5 792 21 0 0 0 chr3R 27244585 27244606 -660447 + AT_rich Low_complexity Low_complexity 1 21 0 5 792 22 35 0 0 chr3R 27244844 27244873 -660180 + AT_rich Low_complexity Low_complexity 1 29 0 5 792 21 0 0 0 chr3R 27246040 27246061 -658992 + AT_rich Low_complexity Low_complexity 1 21 0 5 792 480 72 0 0 chr3R 27246317 27246386 -658667 + (CAT)n Simple_repeat Simple_repeat 2 70 0 5 792 198 71 0 0 chr3R 27249631 27249659 -655394 + (CGAGT)n Simple_repeat Simple_repeat 1 28 0 5 792 213 218 0 0 chr3R 27250876 27250931 -654122 + T-rich Low_complexity Low_complexity 1 55 0 5 792 267 164 0 0 chr3R 27254001 27254062 -650991 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 792 195 114 0 0 chr3R 27257502 27257537 -647516 + (CAG)n Simple_repeat Simple_repeat 1 35 0 5 792 218 211 0 19 chr3R 27258465 27258518 -646535 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 793 204 98 0 68 chr3R 27267599 27267643 -637410 + (GGATG)n Simple_repeat Simple_repeat 4 44 0 5 793 21 0 0 0 chr3R 27269395 27269416 -635637 + AT_rich Low_complexity Low_complexity 1 21 0 5 793 243 0 0 0 chr3R 27269545 27269572 -635481 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 793 180 0 0 0 chr3R 27272648 27272668 -632385 + (TATG)n Simple_repeat Simple_repeat 3 22 0 5 793 282 56 0 0 chr3R 27272753 27272789 -632264 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 793 198 143 0 0 chr3R 27278209 27278244 -626809 + (CACTC)n Simple_repeat Simple_repeat 2 36 0 5 793 198 118 0 0 chr3R 27279579 27279613 -625440 + (CAA)n Simple_repeat Simple_repeat 1 34 0 5 793 240 35 0 0 chr3R 27290055 27290084 -614969 + (CATCC)n Simple_repeat Simple_repeat 1 29 0 5 793 208 299 0 29 chr3R 27302005 27302074 -602979 + (CTG)n Simple_repeat Simple_repeat 2 68 0 5 793 237 65 0 0 chr3R 27305009 27305040 -600013 + (ACTG)n Simple_repeat Simple_repeat 2 32 0 5 793 207 0 0 0 chr3R 27308460 27308483 -596570 + (T)n Simple_repeat Simple_repeat 1 23 0 5 793 207 114 0 0 chr3R 27310434 27310469 -594584 + (CCGAA)n Simple_repeat Simple_repeat 1 35 0 5 793 205 171 0 0 chr3R 27316909 27316944 -588109 + CT-rich Low_complexity Low_complexity 2 36 0 5 793 247 258 0 29 chr3R 27318596 27318664 -586389 + (TTCGGG)n Simple_repeat Simple_repeat 4 69 0 5 793 234 0 0 0 chr3R 27332581 27332607 -572446 + (CTTAA)n Simple_repeat Simple_repeat 1 26 0 5 793 180 0 0 0 chr3R 27336369 27336389 -568664 + (AGATG)n Simple_repeat Simple_repeat 5 24 0 5 793 204 97 0 0 chr3R 27337227 27337258 -567795 + (T)n Simple_repeat Simple_repeat 1 31 0 5 793 248 102 0 20 chr3R 27337574 27337624 -567429 + (CATCC)n Simple_repeat Simple_repeat 1 49 0 5 793 197 33 33 0 chr3R 27337786 27337816 -567237 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 5 793 23 0 0 0 chr3R 27344880 27344903 -560150 + AT_rich Low_complexity Low_complexity 1 23 0 5 793 182 191 0 21 chr3R 27345387 27345435 -559618 + (CCCGAA)n Simple_repeat Simple_repeat 5 51 0 5 793 205 171 0 0 chr3R 27347087 27347122 -557931 + GA-rich Low_complexity Low_complexity 2 36 0 5 793 22 0 0 0 chr3R 27355725 27355747 -549306 + GC_rich Low_complexity Low_complexity 1 22 0 5 793 237 65 0 0 chr3R 27358044 27358075 -546978 + (CAGT)n Simple_repeat Simple_repeat 2 32 0 5 793 21 0 0 0 chr3R 27369466 27369487 -535566 + AT_rich Low_complexity Low_complexity 1 21 0 5 793 225 132 0 0 chr3R 27374260 27374298 -530755 + (CAG)n Simple_repeat Simple_repeat 3 40 0 5 793 411 123 0 0 chr3R 27374636 27374717 -530336 + (TCCA)n Simple_repeat Simple_repeat 2 82 0 5 793 200 222 0 0 chr3R 27381347 27381392 -523661 + A-rich Low_complexity Low_complexity 1 45 0 5 793 180 135 0 0 chr3R 27385327 27385364 -519689 + (A)n Simple_repeat Simple_repeat 1 37 0 5 793 24 0 0 0 chr3R 27391853 27391877 -513176 + AT_rich Low_complexity Low_complexity 1 24 0 5 794 25 65 0 0 chr3R 27397478 27397524 -507529 + AT_rich Low_complexity Low_complexity 1 46 0 5 794 22 0 0 0 chr3R 27401567 27401589 -503464 + AT_rich Low_complexity Low_complexity 1 22 0 5 794 189 107 0 0 chr3R 27403774 27403802 -501251 + (TTG)n Simple_repeat Simple_repeat 1 28 0 5 794 23 33 0 0 chr3R 27413975 27414005 -491048 + AT_rich Low_complexity Low_complexity 1 30 0 5 794 183 162 0 0 chr3R 27423777 27423814 -481239 + (ATTG)n Simple_repeat Simple_repeat 3 39 0 5 794 192 167 0 0 chr3R 27424492 27424540 -480513 + T-rich Low_complexity Low_complexity 1 48 0 5 794 186 133 0 0 chr3R 27425814 27425844 -479209 + (CGGA)n Simple_repeat Simple_repeat 2 31 0 5 794 223 315 0 0 chr3R 27427782 27427855 -477198 + (CTG)n Simple_repeat Simple_repeat 3 75 0 5 794 198 0 0 0 chr3R 27428985 27429007 -476046 + (A)n Simple_repeat Simple_repeat 1 22 0 5 794 180 0 0 0 chr3R 27432360 27432380 -472673 + (GAAAA)n Simple_repeat Simple_repeat 3 22 0 5 794 24 32 0 0 chr3R 27438471 27438502 -466551 + AT_rich Low_complexity Low_complexity 1 31 0 5 794 22 0 0 0 chr3R 27438550 27438572 -466481 + AT_rich Low_complexity Low_complexity 1 22 0 5 794 195 100 0 0 chr3R 27438741 27438771 -466282 + (CAG)n Simple_repeat Simple_repeat 3 32 0 5 794 414 100 0 0 chr3R 27439138 27439198 -465855 + (CAG)n Simple_repeat Simple_repeat 3 62 0 5 794 23 33 0 0 chr3R 27440746 27440776 -464277 + AT_rich Low_complexity Low_complexity 1 30 0 5 794 24 32 0 0 chr3R 27443612 27443643 -461410 + AT_rich Low_complexity Low_complexity 1 31 0 5 794 214 239 0 52 chr3R 27448441 27448538 -456515 + (CAG)n Simple_repeat Simple_repeat 2 93 0 5 794 222 208 0 0 chr3R 27451522 27451575 -453478 + (CCAA)n Simple_repeat Simple_repeat 4 56 0 5 794 237 167 0 0 chr3R 27452399 27452453 -452600 + (GTATG)n Simple_repeat Simple_repeat 5 58 0 5 794 234 0 0 0 chr3R 27453105 27453131 -451922 + (A)n Simple_repeat Simple_repeat 1 26 0 5 794 22 0 0 0 chr3R 27454967 27454989 -450064 + AT_rich Low_complexity Low_complexity 1 22 0 5 794 221 154 26 0 chr3R 27457981 27458020 -447033 + (CCCA)n Simple_repeat Simple_repeat 1 40 0 5 794 183 80 0 0 chr3R 27460204 27460229 -444824 + (CTG)n Simple_repeat Simple_repeat 1 25 0 5 794 207 125 0 0 chr3R 27462306 27462346 -442707 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 794 189 175 0 0 chr3R 27462861 27462901 -442152 + (CCCGAA)n Simple_repeat Simple_repeat 3 42 0 5 794 203 184 0 0 chr3R 27463764 27463802 -441251 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 794 217 219 0 0 chr3R 27465614 27465655 -439398 + CT-rich Low_complexity Low_complexity 1 41 0 5 794 357 149 0 0 chr3R 27467992 27468059 -436994 + (CCGAA)n Simple_repeat Simple_repeat 2 68 0 5 794 381 287 95 65 chr3R 27477114 27477709 -427344 + SAR_DM Satellite Satellite 1 613 -632 5 794 424 100 0 24 chr3R 27478509 27478591 -426462 + (CAG)n Simple_repeat Simple_repeat 3 82 0 5 794 552 140 0 0 chr3R 27486733 27486840 -418213 + (CAG)n Simple_repeat Simple_repeat 3 109 0 5 794 243 0 0 0 chr3R 27488708 27488735 -416318 + (GA)n Simple_repeat Simple_repeat 1 27 0 5 794 213 39 0 0 chr3R 27488917 27488943 -416110 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 794 21 0 0 0 chr3R 27490282 27490303 -414750 + AT_rich Low_complexity Low_complexity 1 21 0 5 794 215 61 0 29 chr3R 27491325 27491359 -413694 + (GCTTG)n Simple_repeat Simple_repeat 4 36 0 5 794 288 0 0 0 chr3R 27493701 27493733 -411320 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 794 225 188 21 0 chr3R 27493923 27493971 -411082 + (TGGG)n Simple_repeat Simple_repeat 2 50 0 5 794 291 281 128 20 chr3R 27495985 27496134 -408919 - DNAREP1_DM LINE Penelope -6 588 424 5 794 210 37 0 0 chr3R 27499016 27499043 -406010 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 5 794 228 100 0 0 chr3R 27503319 27503359 -401694 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 794 22 0 0 0 chr3R 27506312 27506334 -398719 + AT_rich Low_complexity Low_complexity 1 22 0 5 794 43451 0 0 0 chr3R 27517307 27522017 -383036 + DOC LINE Jockey 15 4722 -3 5 795 203 173 0 19 chr3R 27525934 27525987 -379066 + (TCCA)n Simple_repeat Simple_repeat 4 55 0 5 795 200 191 0 0 chr3R 27526580 27526622 -378431 + (TTAGGC)n Simple_repeat Simple_repeat 3 44 0 5 795 234 0 0 0 chr3R 27528206 27528232 -376821 + (GTGTG)n Simple_repeat Simple_repeat 5 30 0 5 795 231 36 0 0 chr3R 27529336 27529364 -375689 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 795 27 0 0 0 chr3R 27530419 27530446 -374607 + AT_rich Low_complexity Low_complexity 1 27 0 5 795 225 197 16 0 chr3R 27534874 27534935 -370118 + (CAG)n Simple_repeat Simple_repeat 3 64 0 5 795 226 178 22 0 chr3R 27538965 27539010 -366043 + CT-rich Low_complexity Low_complexity 2 47 0 5 795 24 32 0 0 chr3R 27541815 27541846 -363207 + AT_rich Low_complexity Low_complexity 1 31 0 5 795 22 0 0 0 chr3R 27544164 27544186 -360867 + AT_rich Low_complexity Low_complexity 1 22 0 5 795 212 189 38 0 chr3R 27549019 27549072 -355981 + (TATATG)n Simple_repeat Simple_repeat 5 59 0 5 795 183 80 0 0 chr3R 27549689 27549714 -355339 + (CAA)n Simple_repeat Simple_repeat 3 27 0 5 795 25 0 0 0 chr3R 27551595 27551620 -353433 + AT_rich Low_complexity Low_complexity 1 25 0 5 795 26 50 0 0 chr3R 27553218 27553258 -351795 + AT_rich Low_complexity Low_complexity 1 40 0 5 795 236 77 26 0 chr3R 27557536 27557575 -347478 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 5 795 202 148 0 36 chr3R 27568027 27568083 -336970 + (CAA)n Simple_repeat Simple_repeat 1 54 0 5 795 21 36 0 0 chr3R 27569876 27569904 -335149 + AT_rich Low_complexity Low_complexity 1 28 0 5 795 31 26 0 0 chr3R 27569949 27569987 -335066 + AT_rich Low_complexity Low_complexity 1 38 0 5 795 22 0 0 0 chr3R 27574775 27574797 -330256 + AT_rich Low_complexity Low_complexity 1 22 0 5 795 180 0 0 0 chr3R 27575200 27575220 -329833 + (GGAGAA)n Simple_repeat Simple_repeat 1 20 0 5 795 21 71 0 0 chr3R 27580887 27580929 -324124 + AT_rich Low_complexity Low_complexity 1 42 0 5 795 243 0 0 0 chr3R 27583698 27583725 -321328 + (TGG)n Simple_repeat Simple_repeat 1 27 0 5 795 180 111 0 0 chr3R 27588161 27588188 -316865 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 5 795 231 146 0 0 chr3R 27589765 27589806 -315247 + (CCA)n Simple_repeat Simple_repeat 2 42 0 5 795 204 216 0 0 chr3R 27589911 27590006 -315047 + (CCG)n Simple_repeat Simple_repeat 1 95 0 5 795 23 68 0 0 chr3R 27595027 27595071 -309982 + AT_rich Low_complexity Low_complexity 1 44 0 5 795 21 0 0 0 chr3R 27597992 27598013 -307040 + AT_rich Low_complexity Low_complexity 1 21 0 5 795 24 67 0 0 chr3R 27602521 27602566 -302487 + AT_rich Low_complexity Low_complexity 1 45 0 5 795 180 0 0 0 chr3R 27604899 27604919 -300134 + (A)n Simple_repeat Simple_repeat 1 20 0 5 795 23 78 0 0 chr3R 27605012 27605063 -299990 + AT_rich Low_complexity Low_complexity 1 51 0 5 795 22 0 0 0 chr3R 27610522 27610544 -294509 + AT_rich Low_complexity Low_complexity 1 22 0 5 795 243 125 0 0 chr3R 27614469 27614509 -290544 + (CAG)n Simple_repeat Simple_repeat 2 41 0 5 795 22 0 0 0 chr3R 27616779 27616801 -288252 + AT_rich Low_complexity Low_complexity 1 22 0 5 795 267 173 0 0 chr3R 27624750 27624802 -280251 + (CAA)n Simple_repeat Simple_repeat 1 52 0 5 795 180 77 0 0 chr3R 27634684 27634710 -270343 + (A)n Simple_repeat Simple_repeat 1 26 0 5 795 21 0 0 0 chr3R 27655518 27655539 -249514 + AT_rich Low_complexity Low_complexity 1 21 0 5 796 248 0 31 0 chr3R 27663874 27663906 -241147 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 796 233 221 123 19 chr3R 27664075 27664181 -240872 + DNAREP1_DM LINE Penelope 172 288 -306 5 796 21 36 0 0 chr3R 27668857 27668885 -236168 + AT_rich Low_complexity Low_complexity 1 28 0 5 796 24 0 0 0 chr3R 27671641 27671665 -233388 + AT_rich Low_complexity Low_complexity 1 24 0 5 796 28 48 0 0 chr3R 27672301 27672343 -232710 + AT_rich Low_complexity Low_complexity 1 42 0 5 796 38 61 0 0 chr3R 27672714 27672780 -232273 + AT_rich Low_complexity Low_complexity 1 66 0 5 796 25 0 0 0 chr3R 27674266 27674291 -230762 + AT_rich Low_complexity Low_complexity 1 25 0 5 796 21 0 0 0 chr3R 27675630 27675651 -229402 + AT_rich Low_complexity Low_complexity 1 21 0 5 796 30 45 0 0 chr3R 27678733 27678777 -226276 + AT_rich Low_complexity Low_complexity 1 44 0 5 796 23 0 0 0 chr3R 27681879 27681902 -223151 + AT_rich Low_complexity Low_complexity 1 23 0 5 796 27 0 0 0 chr3R 27688629 27688656 -216397 + AT_rich Low_complexity Low_complexity 1 27 0 5 796 22 0 0 0 chr3R 27690703 27690725 -214328 + AT_rich Low_complexity Low_complexity 1 22 0 5 796 226 267 0 0 chr3R 27697982 27698042 -207011 + (CAG)n Simple_repeat Simple_repeat 3 62 0 5 796 21 0 0 0 chr3R 27702914 27702935 -202118 + AT_rich Low_complexity Low_complexity 1 21 0 5 796 21 0 0 0 chr3R 27707878 27707899 -197154 + AT_rich Low_complexity Low_complexity 1 21 0 5 796 198 103 0 0 chr3R 27712600 27712629 -192424 + (CACTC)n Simple_repeat Simple_repeat 2 30 0 5 796 8353 66 15 6 chr3R 27713520 27714611 -190442 - FB4_DM DNA Tc1 -1329 2760 1660 5 796 3994 2 0 0 chr3R 27714616 27715044 -190009 - ROO_LTR LTR Pao 0 428 1 5 796 10861 2 10 0 chr3R 27715044 27716250 -188803 - ROO_I LTR Pao 0 8256 7039 5 796 51252 3 3 2 chr3R 27716242 27721950 -183103 - ROO_I LTR Pao -2545 5711 1 5 796 3994 2 0 0 chr3R 27721950 27722378 -182675 - ROO_LTR LTR Pao 0 428 1 5 796 4419 44 6 7 chr3R 27722381 27722928 -182125 - FB4_DM DNA Tc1 -2437 1652 1107 5 796 189 0 0 0 chr3R 27727532 27727553 -177500 + (CATA)n Simple_repeat Simple_repeat 2 22 0 5 796 236 259 0 0 chr3R 27727880 27727938 -177115 + (CTG)n Simple_repeat Simple_repeat 2 59 0 5 796 21 0 0 0 chr3R 27738350 27738371 -166682 + AT_rich Low_complexity Low_complexity 1 21 0 5 796 34 55 0 0 chr3R 27741750 27741805 -163248 + AT_rich Low_complexity Low_complexity 1 55 0 5 796 25 0 0 0 chr3R 27751320 27751345 -153708 + AT_rich Low_complexity Low_complexity 1 25 0 5 796 26 64 0 0 chr3R 27755086 27755133 -149920 + AT_rich Low_complexity Low_complexity 1 47 0 5 796 29 0 0 0 chr3R 27755647 27755676 -149377 + AT_rich Low_complexity Low_complexity 1 29 0 5 796 192 135 0 0 chr3R 27757225 27757262 -147791 + (CAA)n Simple_repeat Simple_repeat 3 39 0 5 796 310 247 5 70 chr3R 27758099 27758286 -146767 + (CTG)n Simple_repeat Simple_repeat 3 177 0 5 796 234 247 0 56 chr3R 27762068 27762158 -142895 + T-rich Low_complexity Low_complexity 1 85 0 5 796 23 0 0 0 chr3R 27766601 27766624 -138429 + AT_rich Low_complexity Low_complexity 1 23 0 5 796 22 0 0 0 chr3R 27767168 27767190 -137863 + AT_rich Low_complexity Low_complexity 1 22 0 5 796 185 132 0 26 chr3R 27769578 27769617 -135436 + A-rich Low_complexity Low_complexity 6 43 0 5 796 25 51 0 0 chr3R 27778749 27778788 -126265 + AT_rich Low_complexity Low_complexity 1 39 0 5 796 349 155 0 0 chr3R 27779613 27779671 -125382 + DMCR1A LINE CR1 4379 4436 -34 5 796 24 0 0 0 chr3R 27779741 27779765 -125288 + AT_rich Low_complexity Low_complexity 1 24 0 5 796 743 0 11 0 chr3R 27780699 27780786 -124267 + (TA)n Simple_repeat Simple_repeat 1 88 0 5 796 1620 44 47 27 chr3R 27780792 27781242 -123811 + (TATAA)n Simple_repeat Simple_repeat 1 459 0 5 796 32 36 0 18 chr3R 27781242 27781265 -123788 + AT_rich Low_complexity Low_complexity 1 23 0 5 796 578 0 42 0 chr3R 27781265 27781337 -123716 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 5 796 32 36 0 18 chr3R 27781337 27781370 -123683 + AT_rich Low_complexity Low_complexity 1 33 0 5 796 948 116 165 23 chr3R 27783096 27783272 -121781 - DNAREP1_DM LINE Penelope -8 586 386 5 796 24 0 0 0 chr3R 27783291 27783315 -121738 + AT_rich Low_complexity Low_complexity 1 24 0 5 796 587 100 0 0 chr3R 27783420 27783500 -121553 - DNAREP1_DM LINE Penelope -514 80 1 5 796 22 0 0 0 chr3R 27783733 27783755 -121298 + AT_rich Low_complexity Low_complexity 1 22 0 5 797 23 33 0 0 chr3R 27788189 27788219 -116834 + AT_rich Low_complexity Low_complexity 1 30 0 5 797 418 145 0 28 chr3R 27793402 27793473 -111580 - DNAREP1_DM LINE Penelope -525 69 1 5 797 1480 103 72 8 chr3R 27794439 27794704 -110349 + DNAREP1_DM LINE Penelope 1 282 -312 5 797 21 0 0 0 chr3R 27795434 27795455 -109598 + AT_rich Low_complexity Low_complexity 1 21 0 5 797 1745 107 207 13 chr3R 27797634 27798026 -107027 + DNAREP1_DM LINE Penelope 24 594 0 5 797 180 179 0 0 chr3R 27799390 27799429 -105624 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 797 22 35 0 0 chr3R 27801729 27801758 -103295 + AT_rich Low_complexity Low_complexity 1 29 0 5 797 218 176 0 19 chr3R 27813627 27813679 -91374 + (CATA)n Simple_repeat Simple_repeat 2 52 0 5 797 24 0 0 0 chr3R 27813922 27813946 -91107 + AT_rich Low_complexity Low_complexity 1 24 0 5 797 27 29 0 0 chr3R 27814068 27814102 -90951 + AT_rich Low_complexity Low_complexity 1 34 0 5 797 21 36 0 0 chr3R 27814830 27814858 -90195 + AT_rich Low_complexity Low_complexity 1 28 0 5 797 204 40 0 0 chr3R 27817844 27817869 -87184 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 5 797 241 52 104 0 chr3R 27818356 27818433 -86620 + (TA)n Simple_repeat Simple_repeat 1 85 0 5 797 31 58 0 0 chr3R 27818497 27818549 -86504 + AT_rich Low_complexity Low_complexity 1 52 0 5 797 26 30 0 0 chr3R 27819421 27819454 -85599 + AT_rich Low_complexity Low_complexity 1 33 0 5 797 27 0 0 0 chr3R 27819911 27819938 -85115 + AT_rich Low_complexity Low_complexity 1 27 0 5 797 679 116 292 27 chr3R 27820781 27820966 -84087 - DNAREP1_DM LINE Penelope 0 594 361 5 797 272 123 27 110 chr3R 27821957 27822030 -83023 + DNAREP1_DM LINE Penelope 16 82 -512 5 797 224 111 41 82 chr3R 27823102 27823200 -81853 + (TTAA)n Simple_repeat Simple_repeat 3 96 0 5 797 33 43 0 0 chr3R 27823254 27823301 -81752 + AT_rich Low_complexity Low_complexity 1 47 0 5 797 3650 0 0 5 chr3R 27823768 27824169 -80884 + BLOOD_LTR LTR Gypsy 1 399 0 5 797 58955 0 0 0 chr3R 27824169 27830780 -74273 + BLOOD_I LTR Gypsy 1 6613 0 5 797 3650 0 0 5 chr3R 27830780 27831181 -73872 + BLOOD_LTR LTR Gypsy 1 399 0 5 797 23 33 0 0 chr3R 27831260 27831290 -73763 + AT_rich Low_complexity Low_complexity 1 30 0 5 797 936 147 444 26 chr3R 27831717 27832136 -72917 + DNAREP1_DM LINE Penelope 1 594 0 5 797 24 32 0 0 chr3R 27832549 27832580 -72473 + AT_rich Low_complexity Low_complexity 1 31 0 5 797 21 0 0 0 chr3R 27832765 27832786 -72267 + AT_rich Low_complexity Low_complexity 1 21 0 5 797 464 259 104 26 chr3R 27833590 27833820 -71233 - DNAREP1_DM LINE Penelope -187 407 160 5 797 512 131 83 0 chr3R 27833817 27833901 -71152 + DNAREP1_DM LINE Penelope 503 593 -1 5 797 24 0 0 0 chr3R 27834449 27834473 -70580 + AT_rich Low_complexity Low_complexity 1 24 0 5 797 24 0 0 0 chr3R 27834656 27834680 -70373 + AT_rich Low_complexity Low_complexity 1 24 0 5 797 319 239 53 60 chr3R 27834774 27834925 -70128 + DNAREP1_DM LINE Penelope 7 156 -438 5 797 421 152 205 4 chr3R 27834926 27835042 -70011 + DNAREP1_DM LINE Penelope 341 453 -141 5 797 26 64 0 0 chr3R 27837551 27837598 -67455 + AT_rich Low_complexity Low_complexity 1 47 0 5 797 58 15 0 0 chr3R 27839273 27839338 -65715 + AT_rich Low_complexity Low_complexity 1 65 0 5 797 22 0 0 0 chr3R 27842289 27842311 -62742 + AT_rich Low_complexity Low_complexity 1 22 0 5 797 22 35 0 0 chr3R 27846464 27846493 -58560 + AT_rich Low_complexity Low_complexity 1 29 0 5 797 618 189 213 39 chr3R 27854025 27854279 -50774 + DNAREP1_DM LINE Penelope 2 299 -295 5 797 45 0 0 0 chr3R 27854404 27854449 -50604 + AT_rich Low_complexity Low_complexity 1 45 0 5 797 27 29 0 0 chr3R 27855454 27855488 -49565 + AT_rich Low_complexity Low_complexity 1 34 0 5 797 35 0 0 0 chr3R 27856803 27856838 -48215 + AT_rich Low_complexity Low_complexity 1 35 0 5 797 23 0 0 0 chr3R 27857293 27857316 -47737 + AT_rich Low_complexity Low_complexity 1 23 0 5 797 600 255 124 16 chr3R 27857461 27857781 -47272 - DNAREP1_DM LINE Penelope -104 490 3 5 797 26 0 0 0 chr3R 27858731 27858757 -46296 + AT_rich Low_complexity Low_complexity 1 26 0 5 797 252 236 0 27 chr3R 27860599 27860673 -44380 + DNAREP1_DM LINE Penelope 499 570 -24 5 797 1877 88 88 7 chr3R 27863067 27863363 -41690 - DNAREP1_DM LINE Penelope 0 594 275 5 797 1040 97 0 0 chr3R 27863403 27863558 -41495 - DNAREP1_DM LINE Penelope -439 155 1 5 797 32 43 0 0 chr3R 27867901 27867947 -37106 + AT_rich Low_complexity Low_complexity 1 46 0 5 797 42 0 0 0 chr3R 27868027 27868069 -36984 + AT_rich Low_complexity Low_complexity 1 42 0 5 797 24 53 0 0 chr3R 27868109 27868147 -36906 + AT_rich Low_complexity Low_complexity 1 38 0 5 797 926 56 210 0 chr3R 27870057 27870200 -34853 - DNAREP1_DM LINE Penelope -9 585 413 5 797 763 78 103 0 chr3R 27870195 27870311 -34742 - DNAREP1_DM LINE Penelope -466 128 1 5 797 32 86 0 0 chr3R 27870703 27870784 -34269 + AT_rich Low_complexity Low_complexity 1 81 0 5 797 229 186 0 0 chr3R 27871559 27871602 -33451 + DNAREP1_DM LINE Penelope 551 593 -1 5 797 27 62 0 0 chr3R 27871747 27871795 -33258 + AT_rich Low_complexity Low_complexity 1 48 0 5 797 21 36 0 0 chr3R 27872259 27872287 -32766 + AT_rich Low_complexity Low_complexity 1 28 0 5 797 23 33 0 0 chr3R 27872969 27872999 -32054 + AT_rich Low_complexity Low_complexity 1 30 0 5 797 30 27 0 0 chr3R 27873076 27873113 -31940 + AT_rich Low_complexity Low_complexity 1 37 0 5 797 382 178 156 0 chr3R 27873801 27873891 -31162 + DNAREP1_DM LINE Penelope 424 527 -67 5 797 22 80 0 0 chr3R 27873929 27873979 -31074 + AT_rich Low_complexity Low_complexity 1 50 0 5 797 27 73 0 0 chr3R 27874064 27874119 -30934 + AT_rich Low_complexity Low_complexity 1 55 0 5 797 344 125 16 0 chr3R 27875767 27875831 -29222 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 797 27 29 0 0 chr3R 27878000 27878034 -27019 + AT_rich Low_complexity Low_complexity 1 34 0 5 797 30 45 0 43 chr3R 27878151 27878221 -26832 + AT_rich Low_complexity Low_complexity 1 67 0 5 797 245 258 0 0 chr3R 27878990 27879056 -25997 + (ATG)n Simple_repeat Simple_repeat 3 68 0 5 797 24 85 0 0 chr3R 27880928 27880987 -24066 + AT_rich Low_complexity Low_complexity 1 59 0 5 797 21 57 0 0 chr3R 27881706 27881741 -23312 + AT_rich Low_complexity Low_complexity 1 35 0 5 797 22 80 0 0 chr3R 27882381 27882431 -22622 + AT_rich Low_complexity Low_complexity 1 50 0 5 797 22 0 0 0 chr3R 27882695 27882717 -22336 + AT_rich Low_complexity Low_complexity 1 22 0 5 797 490 86 0 0 chr3R 27885538 27885608 -19445 - DNAREP1_DM LINE Penelope 0 594 525 5 797 425 157 61 53 chr3R 27885606 27885720 -19333 - DNAREP1_DM LINE Penelope -288 306 192 5 797 282 30 0 0 chr3R 27885726 27885759 -19294 - DNAREP1_DM LINE Penelope -561 33 1 5 797 386 33 0 0 chr3R 27888357 27888418 -16635 - IVK_DM LINE I -7 5395 5335 5 797 24 0 0 0 chr3R 27888429 27888453 -16600 + AT_rich Low_complexity Low_complexity 1 24 0 5 797 1330 122 71 12 chr3R 27890057 27890297 -14756 + DNAREP1_DM LINE Penelope 1 254 -340 5 797 1311 48 83 0 chr3R 27890292 27890460 -14593 + DNAREP1_DM LINE Penelope 413 594 0 5 797 2372 97 44 34 chr3R 27895132 27895517 -9536 - DNAREP1_DM LINE Penelope -7 587 199 5 797 1488 140 97 11 chr3R 27895494 27895974 -9079 + DNAREP1_DM LINE Penelope 123 594 0 5 797 1488 96 64 0 chr3R 27896400 27896618 -8435 + DNAREP1_DM LINE Penelope 363 594 0 5 797 935 170 0 17 chr3R 27897135 27897309 -7744 - HETRP_DM Satellite Satellite -184 1688 1518 5 797 389 156 111 0 chr3R 27897439 27897529 -7524 + DNAREP1_DM LINE Penelope 56 155 -439 5 797 376 157 112 0 chr3R 27897605 27897694 -7359 + DNAREP1_DM LINE Penelope 57 155 -439 5 797 274 105 0 0 chr3R 27897812 27897850 -7203 - HETRP_DM Satellite Satellite -167 1705 1668 5 797 287 116 0 0 chr3R 27897898 27897941 -7112 - HETRP_DM Satellite Satellite -312 1560 1518 5 797 392 156 111 0 chr3R 27898071 27898161 -6892 + DNAREP1_DM LINE Penelope 56 155 -439 5 797 376 157 112 0 chr3R 27898236 27898325 -6728 + DNAREP1_DM LINE Penelope 57 155 -439 5 797 264 132 0 0 chr3R 27898443 27898481 -6572 - HETRP_DM Satellite Satellite -167 1705 1668 5 797 803 83 116 0 chr3R 27898555 27898676 -6377 - DNAREP1_DM LINE Penelope -7 587 453 5 797 1513 52 0 23 chr3R 27898669 27898887 -6166 - HETRP_DM Satellite Satellite -1647 225 13 5 797 3321 40 20 26 chr3R 27898999 27899871 -5182 - HETRP_DM Satellite Satellite -916 867 1 5 797 3321 40 20 26 chr3R 27899983 27900855 -4198 - HETRP_DM Satellite Satellite -916 867 1 5 797 3321 40 20 26 chr3R 27900967 27901839 -3214 - HETRP_DM Satellite Satellite -916 867 1 5 797 3321 40 20 26 chr3R 27901951 27902823 -2230 - HETRP_DM Satellite Satellite -916 867 1 5 797 3321 40 20 26 chr3R 27902935 27903807 -1246 - HETRP_DM Satellite Satellite -916 867 1 5 797 3321 40 20 26 chr3R 27903919 27904791 -262 - HETRP_DM Satellite Satellite -916 867 1 5 797 880 73 100 0 chr3R 27904903 27905053 0 - HETRP_DM Satellite Satellite -916 956 792 5