!transposon_sequence_set.README.v9.42
!February 3 2009
!Comments, corrections to http://flybase.org/cgi-bin/mailto-fbhelp.html


        TRANSPOSON SEQUENCE CANONICAL SETS FOR DROSOPHILA

This is a file of 'canonical' sequences of the transposable elements
from Drosophila.

History: These sequences were originally compiled by Takis Benos (EBI),
Leyla  Bayraktaroglu (Harvard) and Michael Ashburner (EBI & Cambridge)
with help from Aubrey de Grey (Cambridge), Joe Chillemi (Harvard) and
Martin Reese (LBL). We thank Suzi Lewis (Berkeley) for inspiration and
discussion, and Guochun Liao (Berkeley) for his repeat sequence set and
newly discovered transposable element sequences from the Berkeley P1
clones, and Lynn Crosby (Harvard) for her annotations of some elements.

Subsequent curation of these sequences has been in the context of the
Drosophila Genome Project and was a collaboration between M. Ashburner
(Cambridge), Josh Kaminker (Berkeley) and Casey Bergman (Berkeley).  From
Version 8.0 this set has been maintained by Michael Ashburner and Casey
Bergman in Cambridge.

We thank Margi Butler, Elena Casacuberta, Madeline Crosby, Bob Levis, 
Mary-Lou Pardue, Kevin  O'Hare, Horacio Naveira, Dmitri Petrov, Steve 
Schaeffer, Todd Schlenke, Alfredo Villesante & the authors of REBASE for 
sequences and/or annotations.

===============================================================================
March 16 2004. v.8.0
====================

1. Updates of FB identifiers.

2. Added from REPBASE (drorep.ref.4.5.3, January 2003): BS3, BS4,
   Doc4-element, Doc5-element, Fw2, Fw3, Helitron, R1-2, Tc1-2, G5A,
   G7, accord2, gypsy7, gypsy8, gypsy9, gypsy10, gypsy11, gypsy12,
   invader6.

3. ORF1 of Juan added from Repbase record.

4. A new line for synonyms has been introduced into records, e.g.:

   SY   synonym:BEL

   This is not a complete list of synonyms (for which see FlyBase),
   just those in widespread use.

April 6 2004. v.9.0
===================

1.  New records for elements from species other than D. melanogaster:
    Dana\Tom, Dvir\Dv, Dhyd\Bungy, Dbuz\Osvaldo, Dkoe\Gandalf,
    Dmau\mariner, Dhyd\Minos, Dfun\Isfun-1, Dsub\bilbo, Dsil\Loa,
    Dhet\Uhu, Dvir\Ulysses, Dsim\ninja, Dvir\Helena, Dvir\Penelope,
    Dvir\Tv1, Dvir\Tel, Dmir\TRAM, Dmir\TRIM, Dvir\Paris, Dmir\spock,
    Dmir\worf, Dwil\Vege, Dwil\Mar, Damb\P-element_T, Dbif\P-element_M, 
    Dbif\P-element_O, Dsub\SGM, Ddip\Bari1, Dpse\mini-me, Dbuz\BuT1,
    Dbuz\BuT2, Dbuz\BuT3, Dbuz\BuT4, Dbuz\BuT5, Dbuz\BuT6, Dbuz\INE-1,
    Dbuz\ISBu2, Dbuz\Galileo, Dbuz\Kepler, Dbuz\Newton, Dyak\TART,
    Dyak\HeT-A, Dvir\TART, Dvir\HeT-A.

2.  D. melanogaster Helena consensus sequence added. The Circe sequence
    has been replaced from a consensus from A. Villesante.

3. The micropia sequence has been replaced by one that lacks the 4bp
   deletion within the CDS present in the previous record.

4. New sequences for TART-A and TART-C subfamilies added (the only previous
   TART sequence (U14101) was TART-B). The sequences for Tc3 & Beagle2 have
   been extracted from the R3 genome and added. The sequence of the Q element
   has been extracted from the R1 genome and added.

5. Annotations improved for some of the sequences.

6. All annotations now use SO terms.  The syntax is:

FT   SO_feature      <feature> ; <so_id>:<start_base>..<end_base>

e.g.:

FT   SO_feature      five_prime_UTR ; SO:0000204:1..730

April 7 2004. v.9.1
===================

1. The following R1-element variants have been added: Dnet\R1A, Dtak\R1A2, 
   Dmer\R1A3, Dnet\R1B. The original melanogaster element has been
   re-named:R1A1-element.

April 7 2004. v.9.2
===================

1. The Dbuz\ISBu3, Dsub\GEM and Dvir\Uvir elements have been added.

April 18 2004. v.9.2.2
======================

1. Update of annotation of TART-C.

2. Dtei\I-element sequence added.

May 1 2004. v.9.2.3
===================

1. Added prygun as a synonym of Tirant.

June 23 2004. v.9.2.4
=====================

1. accord2 and qbert found to be the same element; accord2 sequence (AC008256)
   removed and qbert sequence (AF541947) renamed as accord2.

September 3 2004. v.9.2.5
=========================

1. Added Doc5-element as synonym of Porto1.

December 10 2004. v.9.3
=======================

1. Added the cDNA sequence for a D. melanogaster Osvaldo-like element.

April 22 2005. v.9.4
====================

1. Updates on FBgn identifiers.
2. Added sequence of the TAHRE element.

April 22 2005. v.9.41
=====================

1. A formatting error in the Helana sequence corrected.

February 3 2009. v.9.42
=====================

1. Dmel\TART-A, Dmel\TART-B, and Dmel\TART-C annotations corrected,
as per Mary-Lou Pardue and Greg DeBaryshe.

2. Dmel\TAHRE annotation corrected, as per Alfredo Villasante.

=====================================================================
The current data set includes 179 elements:

FB gene ID     Symbol            EMBL              Size       Comment

Retroviral elements:

FBgn0000004    17.6              X01472            7439bp     complete
FBgn0000007    1731              X07656            4648bp     complete
FBgn0000005    297               X03431            6995bp     complete
FBgn0005384    3S18              U23420            6126bp     complete
FBgn0000006    412               nnnnnnnn          7567bp     complete
FBgn0063447    accord            nnnnnnnn          7404bp     complete
FBgn0063782    accord2           AF541947          7650bp     complete
FBgn0010103    aurora-element    AB022762          4263bp     ?complete
FBgn0000199    blood             nnnnnnnn          7410bp     complete
FBgn0010302    Burdock           U89994            6411bp     complete
FBgn0022937    Circe             nnnnnnnn          7450bp     complete
FBgn0000349    copia             X02599            5143bp     complete
FBgn0043969    diver             AC004377          6112bp     complete
FBgn0063439    diver2            nnnnnnnn          4917bp     complete
FBgn0062343    Dm88              nnnnnnnn          4558bp     complete
FBgn0014947    flea              Z27119            5034bp     complete
FBgn0061513    frogger           AF492763          2483bp     ?complete
FBgn0015945    GATE              AJ010298          8507bp     complete
FBgn0063436    gtwin             nnnnnnnn          7411bp     complete
FBgn0001167    gypsy             M12927            7469bp     complete
FBgn0063435    gypsy2            nnnnnnnn          6841bp     complete
FBgn0063434    gypsy3            nnnnnnnn          6973bp     complete
FBgn0063433    gypsy4            nnnnnnnn          7369bp     complete
FBgn0063432    gypsy5            nnnnnnnn          6852bp     complete
FBgn0063431    gypsy6            nnnnnnnn          7826bp     complete
FBgn0067384    gypsy7            AE003788          5486bp     incomplete
FBgn0067383    gypsy8            AE003788          4955bp     incomplete
FBgn0067382    gypsy9            AE002591          5349bp     incomplete
FBgn0067387    gypsy10           nnnnnnnn          6006bp     incomplete
FBgn0067386    gypsy11           nnnnnnnn          4428bp     incomplete
FBgn0067385    gypsy12           nnnnnnnn         10218bp     incomplete
FBgn0001207    HMS-Beagle        AF365402          7062bp     complete
FBgnnnnnnnn    HMS-Beagle2       nnnnnnnn          7220bp     complete
FBgn0026065    Idefix            AJ009736          7411bp     complete
FBgn0063430    invader1          nnnnnnnn          4032bp     complete
FBgn0063429    invader2          nnnnnnnn          5124bp     complete
FBgn0063428    invader3          nnnnnnnn          5484bp     complete
FBgn0063427    invader4          nnnnnnnn          3105bp     complete
FBgn0063426    invader5          nnnnnnnn          4038bp     complete
FBgn0067380    invader6          NT_033778         4885bp     incomplete
FBgn0063919    Max-element       AJ487856          8556bp     complete
FBgn0063917    McClintock        AF541948          6450bp     complete
FBgn0002697    mdg1              X59545            7480bp     complete
FBgn0002698    mdg3              X95908            5519bp     complete
FBgn0002745    micropia          X14037,X15066     5461bp     complete
FBgn0003007    opus              AY180918          7521bp     complete
FBgn0063755    Osvaldo           AY089271          1543bp     incomplete
FBgn0044355    Quasimodo         AF364550          7387bp     complete
FBgn0000155    roo               AY180917          9092bp     complete
FBgn0063394    rooA              nnnnnnnn          7621bp     complete
FBgn0061485    rover             AF492764          7318bp     complete
FBgn0003490    springer          AF364549          7546bp     complete
FBgn0003519    Stalker           AF420242          7256bp     complete
FBgn0063455    Stalker2          nnnnnnnn          7672bp     complete
FBgn0063454    Stalker3          nnnnnnnn           372bp     LTR
FBgn0063897    Stalker4          AF541949          7359bp     complete
FBgn0045970    Tabor             AC007146          7345bp     complete
FBgn0004082    Tirant            nnnnnnnn          8526bp     complete
FBgn0063450    Tom1              nnnnnnnn           410bp     LTR
FBgn0040267    Transpac          AF222049          5249bp     complete
FBgn0023131    ZAM               AJ000387          8435bp     complete
FBgn0004357    Dana\Tom          Z24451            7060bp     complete
FBgn0013796    Dbuz\Osvaldo      AJ133521          9045bp     complete
FBgn0005772    Dmir\TRAM         Y08905            3452bp     ?complete
FBgn0004642    Dmir\TRIM         X59239            3111bp     ?complete
FBgn0015168    Dsim\ninja        D83207            6644bp     complete
FBgn0004146    Dvir\Ulysses      X56645           10653bp     complete
FBgn0020675    Dvir\Tel          AF009439          2485bp     incomplete
FBgn0013099    Dvir\Tv1          AF056940          6898bp     complete

non-LTR retrotransposons:

FBgn0063440    baggins           nnnnnnnn          5453bp     complete
FBgn0000224    BS                nnnnnnnn          5142bp     complete
FBgn0067624    BS3               nnnnnnnn          1790bp     ?complete
FBgn0067623    BS4               nnnnnnnn          754bp      incomplete
FBgn0063594    Cr1a              nnnnnnnn          4470bp     complete
FBgn0000481    Doc               X17551            4725bp     ?incomplete
FBgn0063534    Doc2-element      nnnnnnnn          4789bp     complete
FBgn0063533    Doc3-element      nnnnnnnn          4740bp     complete
FBgn0069587    Doc4-element      nnnnnnnn          2791bp     incomplete
FBgn0000652    F-element         AC005198          4708bp     complete
FBgn0067421    Fw2               nnnnnnnn          3961bp     ?complete
FBgn0067420    Fw3               nnnnnnnn          3132bp     ?complete
FBgn0001100    G-element         X06950            4346bp     ?complete
FBgn0063507    G2                nnnnnnnn          3102bp     complete
FBgn0063506    G3                nnnnnnnn          4605bp     complete
FBgn0063505    G4                nnnnnnnn          3856bp     complete
FBgn0063504    G5                nnnnnnnn          4856bp     complete
FBgn0069433    G5A               nnnnnnnn          2841bp     incomplete
FBgn0063503    G6                nnnnnnnn          2042bp     complete
FBgn0067419    G7                AC003788          1192bp     incomplete
FBgn0020425    Helena            nnnnnnnn          1318bp     incomplete
FBgn0004141    HeT-A             U06920            6083bp     complete
FBgn0001249    I-element         M14954            5371bp     complete
FBgn0043055    Ivk               nnnnnnnn          5402bp     complete
FBgn0046110    Juan              AY180919          4236bp     complete
FBgn0001283    jockey            M22874            5020bp     complete
FBgn0063425    jockey2           nnnnnnnn          3428bp     complete
FBgn0046701    Penelope          AF418572           804bp     incomplete
FBgn0015786    Porto1            nnnnnnnn          4682bp     ?complete
FBgn0063900    Q-element         AE002612           759bp     incomplete
FBgn0003908    R1A1-element      X51968            5356bp     complete
FBgn0067405    R1-2              nnnnnnnn          3216bp     incomplete
FBgn0003909    R2-element        X51967            3607bp     complete
FBgn0041728    Rt1a              AJ278684          5108bp     complete
FBgn0063467    Rt1c              nnnnnnnn          5443bp     complete
FBgn0042682    Rt1b              AF281636          5171bp     complete
FBgn0069343    TAHRE             AJ542581         10463bp     complete
FBgn0004904    TART-A            AY561850         13424bp     complete
FBgn0004904    TART-B            U14101           10654bp     complete
FBgn0004904    TART-C            AY600955         11124bp     complete
FBgn0042231    X-element         AF237761          4740bp     complete
FBgn0013836    Dmer\R1A3         AF015277          3772bp     incomplete
FBgn0015678    Dmir\spock        AY144571          4952bp     ?complete
FBgn0064494    Dmir\worf         AY144572          4174bp     ?complete
FBgn0013854    Dnet\R1A          AF248067          1757bp     incomplete
FBgn0013854    Dnet\R1B          AF248068          2038bp     incomplete
FBgnnnnnnnn    Dpse\mini-me      AC131959          4622bp     complete
FBgn0005661    Dsil\Loa          X60177            7779bp     ?complete
FBgn0023239    Dsub\bilbo        U73803            5540bp     complete
FBgn0013903    Dtak\R1A2         U23198            1753bp     incomplete
FBgn0013017    Dtei\I-element    M28878            5386bp     complete
FBgn0011601    Dvir\Helena       U26847             691bp     incomplete
FBgn0015679    Dvir\Penelope     U49102            4158bp     ?complete
FBgn0067468    Dvir\HeT-A        AY369259          6610bp     complete
FBgn0066148    Dvir\TART         AY219709          8500bp     complete
FBgn0067460    Dvir\Uvir         AY369259          6564bp     ?complete
FBgn0024768    Dyak\HeT-A        AF043258          5691bp     complete
FBgn0026443    Dyak\TART         AF468026          8444bp     incomplete

SINE-like elements:

FBgn0026416    INE-1             U66884             611bp     ?incomplete
FBgn0012361    Dhyd\Bungy        U14600             227bp     ?complete

IR-elements:

FBgn0005673    1360              nnnnnnnn          3409bp     complete
FBgn0005773    Bari1             X67681            1728bp     complete
FBgn0064134    Bari2             AF541951          1064bp     complete
FBgn0001181    HB                X01748            1653bp     ?incomplete
FBgn0001210    hobo              M69216            2959bp     complete
FBgn0014967    hopper            X80025            1435bp     incomplete
FBgn0067381    hopper2           AF541950          1593bp     incomplete
FBgn0063402    looper1           nnnnnnnn          1881bp     incomplete
FBgn0063401    mariner2          nnnnnnnn           912bp     complete
FBgn0002949    NOF               X15469;X51937     4347bp     complete
FBgn0003055    P-element         X06779            2907bp     complete
FBgn0003122    pogo              X59837            2121bp     complete
FBgn0004905    S-element         U33463            1736bp     ?incomplete
FBgn0063466    S2                nnnnnnnn          1735bp     complete
FBgn0026410    Tc1               nnnnnnnn          1666bp     complete
FBgn0069340    Tc1-2             nnnnnnnn          1644bp     complete
FBgn0061191    Tc3               AC009537          1743bp     complete
FBgn0063372    transib1          nnnnnnnn          2167bp     complete
FBgn0063371    transib2          nnnnnnnn          2844bp     complete
FBgn0063370    transib3          nnnnnnnn          2883bp     complete
FBgn0063369    transib4          nnnnnnnn          2656bp     complete
FBgn0020218    Damb\P-element_T  AF012414          3329bp     ?complete
FBgn0012207    Dbif\P-element_M  X60990            2935bp     complete
FBgn0012207    Dbif\P-element_O  X71634            2986bp     complete
FBgn0063576    Dbuz\BuT1         AF162798           769bp     ?incomplete
FBgn0063575    Dbuz\BuT2         AF368884          2775bp     ?incomplete
FBgn0063575    Dbuz\BuT3         AF368870           795bp     ?incomplete
FBgn0063573    Dbuz\BuT4         AF368868          1447bp     ?incomplete
FBgn0063572    Dbuz\BuT5         AF368868           669bp     ?incomplete
FBgn0069879    Dbuz\BuT6         AY187768           387bp     ?incomplete
FBgn0045754    Dbuz\INE-1        AF368900          1467bp     ?incomplete
FBgn0045754    Dbuz\ISBu2        AF368867           726bp     ?incomplete
FBgn0045754    Dbuz\ISBu3        AY313771           993bp     ?incomplete
FBgn0020486    Ddip\Bari1        Y13852            1676bp     incomplete
FBgn0044997    Dfun\Isfun-1      AJ309320           928bp     incomplete
FBgn0003948    Dhet\Uhu          X63028            1658bp     ?complete
FBgn0010242    Dhyd\Minos        Z29098            1773bp     complete
FBgn0014755    Dkoe\Gandalf      U29466             979bp     incomplete
FBgn0002651    Dmau\mariner      M14653            1286bp     complete
FBgn0026463    Dsub\GEM          AJ131629          1730bp     ?complete
FBgn0015678    Dvir\Paris        Z49253            1728bp     complete

MITE elements:

FBgn0066141    Dwil\Mar           AF518731          610bp     ?complete
FBgn0066140    Dwil\Vege          AF518730          884bp     ?complete
FBgn0069871    Dsub\SGM           AF043638          823bp     ?complete

Foldback elements:

FBgn0000638    FB                V00246            1106bp     ?incomplete
FBgn0027840    Dbuz\Galileo      AY187769          2304bp     ?incomplete
FBgn0063570    Dbuz\Kepler       AF368884           722bp     ?incomplete
FBgn0063569    Dbuz\Newton       AF368890          1510bp     ?incomplete

Helitron elements:

FBgn0067418    Helitron          AE002840           564bp     ?incomplete

Class uncertain:

FBgn0000513    Dvir\Dv           X03936             845bp     ?incomplete
===============================================================================

________________________________________________________________________
!transposon_sequence_set.embl.v.9.42
!February 3 2009
!See transposon_sequence_set.readme.v9.42 for description & comments.
!Comments, corrections to http://flybase.org/cgi-bin/mailto-fbhelp.html
!
ID   DME9736    standard; DNA; INV; 7411 BP.
XX
AC   AJ009736;
XX
DR   FLYBASE; FBgn0026065; Idefix.
XX
FT   source          AJ009736:1..7411
FT   SO_feature      five_prime_LTR ; SO:0000425:1..600
FT   SO_feature      three_prime_LTR ; SO:0000426:6841..7411
FT   SO_feature      CDS ; SO:0000316:<988..2031
FT                   /db_xref="FLYBASE:FBgn0027381; Idefix\gag"
FT                   /db_xref="SPTREMBL:O96739"
FT                   /protein_id="CAA08806.1"
FT                   /translation="ARKLKDIMAVPQLSETHLNQLLNQIKELNYYDGAPGKLSGFVNQV
FT                   EQLLSLYPTQEARQAHVIYGAVKRLLVDSALEVVTQERANTWLDMKKALAMAFKDHRPY
FT                   VTLIRQLEDISYPGSICKFIEKLETQYWIMFDKLELESDHVDKSNYTEMLNKTVKSVID
FT                   RKLPDRIYMSLARKDIDTIYKLKQASMELGLYDAIPENHRSNRTEMNKRRNRGNYNQNN
FT                   NQKYYNNRNHNYSNYYPSMNQNHNTQPPQNPTQPMTNQNQYSPRFIPNNQRGNYYAFRR
FT                   DLTQAQQNNPLNNTLNFQPSTSNNINRQGPVKRQRESQSDQSRMDVNFHQAASDTQMIE
FT                   KDIQVPM"
FT   SO_feature      CDS ; SO:0000316:<1950..5402
FT                   /db_xref="FLYBASE:FBgn0027380; Idefix\pol"
FT                   /db_xref="SPTREMBL:O96740"
FT                   /protein_id="CAA08807.1"
FT                   /translation="PKQDGCKFSSSCLGHSNDREGHTSPYVKIIHHNKNYKGMIDTGSS
FT                   INIIRENFENLEEKEENLIVYTIKGPITLKRSIIIKPTSVCPSAQKFYIHKFSDNYDFL
FT                   LGRKYLEDTKAKIDYANETVTLGSKVFKFLYEEKKGETASKCLDPQEKNDSALVDRTKP
FT                   KMQKVKTAPKCLKPKHQQQKKETALPKCLISNVVKDTVDNDVTHLDPMSVDNDIVNFAI
FT                   NNELRECNEYRLEHLNAEEVECLKKFLYEYRDIQYKEGENLTFTSTIKHVIQTQHEDPV
FT                   YRKPYKYPQSVDQEVNKQIKEMIEQGIVRKSKSPYCSPIWVVPKKADASGKQKFRLVVD
FT                   YRNLNEITVNDKFPIPRMDEILDKLGRCQYFTTIDLAKGFHQIQMDENSIAKTAFSTKH
FT                   GHYEYTRMPFGLKNAPATFQRCMNNLLEDLIYKDCLVYLDDIIVYSTPLEEHILSLKKV
FT                   FEKLRDANLKLQLDKCEFMKKETEFLGHIVTTNGIKPNPNKTKAITNFPLPKTPKQIKS
FT                   FLGLCGFYRKFIPNFAKIVKPMTLKLKKGAIIDTKCKEYIESFEKLKVLITSDPILIYP
FT                   DFSKPFSLTTDASNVAIGAVLSQNHKPVCYASRTLNEHEINYATIEKELLAIVWATKYF
FT                   RSYLFGRPFEVLSDHKPLVWLNNIKEPNMKLQRWKIKLNEFDYKIKYLPGKENHVADAL
FT                   SRTKIEVMVGEVANSADATIHSAIEDNLNYIPITERPINYFSRQIEIEKGDNDTTSVQH
FT                   LFQKLKIKIVYKEMTPELAKNLIKEYVCTKKSAIYFPNDEDFLIFQRAFTEIISPNNFT
FT                   KLLRCTTKLIDILTYAEFKDLILKKHKELLHPGIEKTINLFKEEYYYPDSQKLIQTIIN
FT                   ECQICYLAKTEHQTQMTYETTPEIFNTREKYMIDFYLTGNQIFLSCIDIYSKFASLVEL
FT                   KSRDWLEAKRAITKIFNDMGKPQEIKADKDSAFMCLALQNWLRSEGVQISISTSKNGIS
FT                   DIERFHKTVNEKLRIIGSQQNVEDRCTKFERILYIYNHKTKHNSTKRFPADIFLYAGSP
FT                   DFNVQQNKIDRIEYLNKNRHDFEVDIKYRQAPLVKSKITNPFKKTGRIGQVDDKHFEET
FT                   NRGRKIVHYKSKFKKQKKFNKSKYDNSRPTKEAQSTQHTSNNA"
FT   SO_feature      CDS ; SO:0000316:5248..6780
FT                   /db_xref="FLYBASE:FBgn0027382; Idefix\env"
FT                   /db_xref="SPTREMBL:O96741"
FT                   /protein_id="CAA08808.1"
FT                   /translation="MINISKKQIVAGRSFTISQNLRNRKSLIRANMIIPDQPKKHKVHN
FT                   ILLIMLSCILSLIITVKCNNIEVNPVNAKNGYLIFQTGTMEIPTSYEYHYLSINITKTM
FT                   LMFEDIVSEANNYPNVPQIQYLVDKLKREINGLRIISRSKRGLLNVVGKAYKYLFGTLD
FT                   EDDREELEEKINNMSEDSVKTHDLNTILDVINSGIDIINKLKVDKEQHQQIAVLIFNLE
FT                   QFTEYIEDIELGLQLTRLGIFNPRLLKHDYLKHVNSEKMLKIKTSTWLKTDTNEILIIS
FT                   HIPSEVTKVPIFQIVPYPDEHNYILTEQIFDKFYIFDNQVFHKDTNRDIFDKCIIGIIK
FT                   QEQTQCKYIKTHKNYQINYIEPNILLTWNIPETAVNQDCTHNKILISGNNIIKIKNCTI
FT                   QIDEFLISNNLADFTQTIYITNNVTRLEPINHLQTREMIETHVKHYNFFQIICITTFVI
FT                   MIISLTLYVAYKFKNIPKKIIVNIVSKKNTRTLKIMSMKIFNKEIILPYTQI"
XX
CC   Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1).
CC   Takis Benos and Michael Ashburner, 1-Feb-1999.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7411 BP; 3047 A; 1363 C; 1109 G; 1892 T; 0 other;
     GTGACATATC CATAAGTCCC TAAGACTTAA GCATATGCCT ACATACTAAT ACACTTACAA        60
     CACATACACC CCAATACAAC ATACACTACT CCGGATGTAC CCAACAGATA CCAGATAAGA       120
     ATAAGATTGT TATATGATCC TCGAGAATGG AAAAAACCCC AATTCTAGAT AAGTCACCCA       180
     CTGGTAGACT AAACATCCGT CCCCTAATTT AAACAATTCC TTGCTTAAGC CTCACCCCAT       240
     CGTCACATTC CCACGTTCAA AGCTCGGAGC CGCAATCCCG AAAAACAAAA GTATCGATTT       300
     CAATAAACAA ATTATAAGAA TCTAAGAGCA CTTGTATCCA AGAGCAAATG CACTTGAATC       360
     CAAGAGAAAC GCAAAGCTTT TTCTCTTTAC GATCAGAATC CTAAAGTCTA AAGTCCATAT       420
     TAGAAAAGCT CGATACCGAG GCTTGAACGT CAACCAAATC AGAATAATTA TCAGAGTTCA       480
     GTTTGAGACC TAATTGTAAA AGGTTCGGTG TTCTTCTCAA ATAAAAAGAT TGTAATCATT       540
     TAGTGAAATA AAAATTATAT TTTTTTCACT TATAAATATT GCAAGTATTT AATTGGCGCA       600
     GTCGGTTAGG ATCCAATAAA ATAAAAGAGT CCTTTTAGTA CGGTACTGAT CAACTGAAGG       660
     ATATGCTATA CGACTAGCTA TCCAAGATCA GCGAATTAAA ATAGTGATTC AAAAATATTT       720
     TTTAATCCGC AAAAGAATCT ACGTGAAAGT AGTATTCAAA ATAAAATCCC GTGCGGTCGG       780
     AAACAAAAAT TAATTTAAAT TTTTTAATTC CGAAACTTAA AACCAAGTTT AAAGAAAACT       840
     TAAAATCAAG AAAACTTAAA ACCAAGTTTA AAGAAAACTT AAAATCAAGA AAACTTAAAA       900
     CCAAGTTTAA AGAAAACTTA AAATCAAGAA AACTTAAAAC CAAGTTTAAA GAAAACTCAA       960
     AATCAAGAAA ACTTAAAGCC AAAATAAGCT AGAAAACTAA AAGACATCAT GGCAGTCCCA      1020
     CAACTCTCAG AAACACACCT AAACCAACTG CTAAACCAAA TCAAAGAATT AAACTACTAC      1080
     GATGGCGCAC CTGGCAAATT ATCTGGATTC GTCAACCAAG TGGAACAACT GCTCAGTTTA      1140
     TACCCAACAC AGGAAGCAAG ACAGGCACAC GTCATATATG GAGCAGTGAA GCGGTTATTA      1200
     GTGGATTCAG CCTTAGAAGT CGTAACCCAG GAAAGAGCTA ACACATGGCT GGACATGAAG      1260
     AAAGCACTGG CAATGGCATT CAAAGACCAT AGACCTTATG TAACTCTCAT CAGACAATTA      1320
     GAAGACATAT CATACCCAGG AAGTATCTGT AAGTTTATAG AAAAATTAGA AACACAATAC      1380
     TGGATTATGT TCGATAAGTT AGAATTAGAA AGTGACCATG TTGATAAATC GAATTATACC      1440
     GAAATGTTAA ACAAAACTGT TAAATCAGTA ATAGATCGAA AACTGCCGGA TAGAATTTAT      1500
     ATGTCTTTGG CACGTAAAGA TATTGATACA ATTTATAAAT TAAAACAAGC ATCAATGGAA      1560
     TTAGGCCTTT ATGATGCTAT TCCAGAAAAT CACCGTTCTA ATAGAACAGA AATGAATAAA      1620
     CGTAGGAACA GGGGAAACTA TAATCAAAAT AATAATCAAA AATATTACAA TAATAGAAAT      1680
     CACAACTACA GTAATTATTA TCCTAGCATG AATCAGAATC ATAATACACA ACCACCTCAG      1740
     AATCCGACTC AACCTATGAC AAATCAAAAC CAATATTCAC CGCGTTTCAT ACCGAATAAT      1800
     CAAAGAGGGA ATTATTATGC ATTTAGACGA GACTTAACAC AAGCTCAGCA GAACAACCCA      1860
     CTTAATAACA CCCTTAACTT CCAACCTTCG ACATCGAATA ATATTAACAG ACAAGGGCCA      1920
     GTAAAAAGAC AACGCGAGAG TCAGAGTGAC CAAAGCAGGA TGGATGTAAA TTTTCATCAA      1980
     GCTGCCTCGG ACACTCAAAT GATAGAGAAG GACATACAAG TCCCTATGTA AAAATAATTC      2040
     ATCATAATAA AAATTATAAG GGAATGATCG ATACAGGATC ATCAATTAAC ATCATAAGAG      2100
     AAAATTTTGA GAACTTAGAA GAAAAGGAAG AAAACCTAAT AGTATACACT ATTAAAGGAC      2160
     CAATAACACT AAAGAGAAGT ATAATAATAA AACCTACTTC AGTATGTCCG TCTGCTCAAA      2220
     AATTCTACAT TCACAAATTT TCTGATAACT ATGATTTCTT GTTAGGTCGA AAGTATTTAG      2280
     AAGATACAAA AGCTAAAATA GATTATGCTA ACGAAACAGT AACACTAGGC TCAAAAGTAT      2340
     TTAAGTTTCT CTATGAAGAA AAGAAGGGCG AGACCGCATC CAAATGCCTT GACCCACAAG      2400
     AAAAGAATGA TTCCGCTCTA GTGGACAGAA CCAAACCAAA AATGCAAAAG GTTAAGACCG      2460
     CACCTAAGTG CCTTAAACCA AAGCATCAAC AGCAGAAGAA AGAGACCGCA TTACCCAAAT      2520
     GCCTCATTTC AAATGTTGTT AAAGACACAG TGGACAATGA TGTAACACAT CTCGATCCCA      2580
     TGTCCGTTGA CAACGATATA GTCAACTTCG CGATTAACAA TGAGTTACGC GAATGTAACG      2640
     AGTATAGACT CGAACACTTA AATGCAGAGG AAGTTGAATG TTTAAAGAAG TTCCTATACG      2700
     AATATAGAGA CATTCAGTAC AAAGAGGGCG AAAATTTGAC CTTCACCAGT ACTATTAAAC      2760
     ATGTCATCCA GACTCAACAC GAAGACCCAG TATACCGTAA ACCCTACAAG TACCCTCAAA      2820
     GCGTTGACCA AGAAGTTAAC AAACAAATTA AAGAAATGAT AGAACAAGGG ATTGTTCGCA      2880
     AATCGAAGTC CCCTTATTGT TCTCCTATTT GGGTGGTCCC CAAGAAGGCA GACGCCTCTG      2940
     GGAAACAAAA ATTCAGGTTG GTAGTCGATT ACAGGAACCT AAATGAGATA ACTGTTAACG      3000
     ACAAATTTCC CATTCCCCGA ATGGATGAGA TATTGGACAA ACTAGGTAGA TGCCAATACT      3060
     TTACCACTAT AGATCTAGCC AAGGGTTTTC ACCAAATCCA AATGGATGAA AATTCTATTG      3120
     CAAAAACAGC TTTTTCAACT AAGCATGGGC ATTATGAATA TACTCGTATG CCCTTTGGTT      3180
     TAAAAAACGC TCCAGCTACT TTTCAGAGAT GCATGAATAA TCTTCTGGAA GATTTAATCT      3240
     ACAAAGACTG TTTAGTCTAT TTAGACGATA TTATTGTTTA TTCCACTCCA TTGGAAGAAC      3300
     ACATTTTATC CCTAAAGAAA GTCTTTGAAA AACTGAGAGA CGCTAATTTA AAGTTGCAAC      3360
     TAGATAAATG TGAATTCATG AAGAAAGAAA CTGAATTCCT AGGACACATC GTCACAACAA      3420
     ATGGCATCAA ACCAAATCCA AATAAAACTA AAGCAATTAC AAATTTTCCA TTACCCAAGA      3480
     CACCTAAGCA AATAAAATCA TTTTTGGGAT TATGTGGATT CTATCGCAAG TTTATTCCTA      3540
     ACTTTGCCAA AATAGTTAAA CCCATGACCC TCAAATTAAA GAAAGGTGCT ATAATAGACA      3600
     CCAAATGTAA AGAATACATC GAATCATTTG AAAAATTAAA AGTTTTGATA ACTTCAGACC      3660
     CGATATTAAT CTATCCTGAT TTTTCAAAAC CTTTTTCTTT GACAACTGAT GCTAGCAACG      3720
     TAGCTATTGG TGCAGTGTTA TCACAAAATC ACAAGCCAGT TTGTTATGCC AGTAGAACGC      3780
     TAAACGAACA TGAAATCAAC TATGCTACGA TTGAAAAAGA ATTGTTAGCT ATAGTTTGGG      3840
     CTACAAAATA TTTCAGGTCA TACTTATTCG GCAGACCATT TGAAGTATTA AGTGATCACA      3900
     AGCCACTGGT ATGGCTCAAC AACATTAAAG AACCAAACAT GAAATTGCAA AGATGGAAAA      3960
     TAAAACTTAA TGAATTCGAT TATAAAATCA AATATCTTCC AGGCAAAGAA AACCATGTCG      4020
     CGGATGCTCT TTCCCGCACG AAAATAGAAG TTATGGTTGG CGAGGTCGCA AATAGCGCAG      4080
     ACGCAACTAT ACACAGTGCC ATTGAAGATA ATCTAAATTA CATACCCATA ACAGAAAGAC      4140
     CAATAAATTA CTTCTCTAGA CAAATAGAGA TAGAAAAAGG CGATAACGAT ACAACAAGTG      4200
     TACAACATTT GTTTCAAAAA TTAAAGATTA AGATAGTCTA TAAAGAAATG ACACCTGAAC      4260
     TCGCCAAAAA CCTCATTAAG GAATATGTGT GCACCAAAAA GAGTGCAATT TATTTCCCTA      4320
     ATGACGAAGA TTTTCTGATC TTCCAGAGAG CGTTTACCGA AATTATAAGC CCTAACAATT      4380
     TCACAAAACT CTTGAGATGT ACCACAAAGT TAATTGATAT ACTAACGTAT GCAGAATTCA      4440
     AAGATTTAAT CTTAAAGAAA CATAAGGAAC TTTTACATCC GGGTATAGAA AAAACAATCA      4500
     ATTTATTTAA AGAAGAATAT TACTATCCTG ATAGTCAAAA GCTTATTCAA ACCATTATCA      4560
     ATGAATGTCA AATTTGTTAT CTAGCAAAAA CGGAACATCA AACACAAATG ACATATGAGA      4620
     CTACACCAGA AATATTTAAC ACAAGAGAAA AATACATGAT AGATTTTTAT CTCACAGGAA      4680
     ACCAGATCTT CTTATCTTGC ATTGATATCT ATTCGAAATT TGCATCACTA GTTGAATTAA      4740
     AAAGTAGAGA TTGGCTAGAA GCAAAAAGAG CCATTACTAA AATATTCAAT GACATGGGAA      4800
     AACCGCAAGA AATTAAAGCA GACAAAGACT CAGCTTTTAT GTGTTTAGCC TTACAAAATT      4860
     GGTTAAGATC TGAAGGTGTA CAAATTTCTA TAAGCACTAG CAAAAATGGT ATATCTGATA      4920
     TAGAAAGATT CCACAAGACC GTAAACGAAA AGCTAAGAAT CATTGGTAGC CAACAAAATG      4980
     TTGAAGATAG GTGCACAAAA TTCGAAAGAA TTCTATACAT ATACAATCAC AAAACTAAAC      5040
     ATAATAGTAC TAAAAGATTT CCAGCAGACA TTTTCCTATA TGCAGGCAGT CCAGATTTTA      5100
     ATGTACAACA AAACAAAATC GATAGGATAG AATACCTCAA TAAGAATAGA CACGATTTTG      5160
     AAGTTGATAT AAAATATAGA CAAGCCCCAC TTGTAAAAAG TAAAATAACC AATCCATTTA      5220
     AAAAGACAGG AAGAATTGGA CAAGTAGATG ATAAACATTT CGAAGAACAA AATCGTGGCA      5280
     GGAAGATCGT TCACTATAAG TCAAAATTTA AGAAACAGAA AAAGTTTAAT AAGAGCAAAT      5340
     ATGATAATTC CAGACCAACC AAAGAAGCAC AAAGTACACA ACATACTTCT AATAATGCTT      5400
     AGTTGCATAC TATCACTTAT CATCACGGTC AAGTGCAACA ATATAGAAGT AAATCCAGTA      5460
     AACGCGAAAA ATGGATACCT TATATTCCAA ACAGGAACAA TGGAAATTCC AACCAGCTAT      5520
     GAATACCATT ATTTAAGCAT AAACATAACA AAGACAATGC TCATGTTCGA AGATATAGTA      5580
     AGTGAAGCAA ACAACTATCC TAATGTACCA CAAATACAAT ATTTAGTCGA CAAATTAAAA      5640
     CGAGAAATAA ATGGGTTAAG AATTATTAGT CGAAGTAAAA GAGGTCTTTT AAACGTAGTA      5700
     GGAAAAGCAT ACAAATACTT ATTCGGCACA TTAGATGAGG ATGACAGAGA AGAGTTAGAA      5760
     GAAAAAATAA ACAACATGTC AGAAGACTCT GTAAAAACCC ATGACCTAAA CACGATTCTA      5820
     GATGTAATCA ATAGTGGTAT AGATATAATT AATAAGCTCA AAGTAGATAA AGAACAACAC      5880
     CAACAAATTG CGGTACTAAT ATTTAACCTA GAGCAATTTA CAGAATATAT AGAAGACATA      5940
     GAATTGGGTC TGCAATTAAC CAGACTAGGA ATTTTCAATC CAAGATTACT AAAGCATGAC      6000
     TATTTAAAAC ATGTAAATTC AGAAAAAATG CTAAAGATAA AAACGTCAAC CTGGCTTAAA      6060
     ACAGACACGA ACGAAATTTT GATTATTTCC CATATTCCTA GCGAAGTTAC TAAAGTTCCA      6120
     ATATTCCAAA TTGTTCCGTA CCCAGATGAA CATAATTATA TTCTAACCGA GCAAATATTC      6180
     GATAAATTCT ACATATTTGA TAACCAAGTA TTCCATAAAG ATACCAATAG GGATATATTC      6240
     GACAAATGTA TTATTGGAAT CATCAAACAA GAGCAAACTC AATGCAAATA TATTAAAACA      6300
     CATAAAAATT ACCAAATAAA TTATATAGAA CCAAATATAC TATTAACATG GAATATTCCT      6360
     GAAACAGCTG TTAACCAAGA CTGTACACAC AATAAAATAT TAATTTCAGG AAACAACATC      6420
     ATTAAAATTA AAAATTGTAC CATACAAATA GATGAATTCT TAATCTCTAA TAATCTAGCA      6480
     GACTTTACAC AAACAATTTA TATCACCAAC AATGTAACAC GTCTAGAACC AATAAATCAC      6540
     TTACAAACGA GAGAAATGAT AGAAACCCAT GTAAAACACT ATAACTTTTT TCAAATTATA      6600
     TGCATTACAA CGTTCGTCAT AATGATAATT AGTTTGACTC TGTATGTAGC ATATAAGTTT      6660
     AAAAATATAC CTAAGAAAAT TATTGTCAAT ATCGTAAGCA AAAAGAACAC ACGCACCTTG      6720
     AAAATAATGT CAATGAAAAT ATTCAACAAG GAAATAATAT TACCTTATAC CCAAATTTAA      6780
     CGACCTGAGG ACAGGCCAAA TTCAAAGGTT GGGGGAGTGA CATATCCATA AGTCCCTAAG      6840
     ACTTAAGCAT ATGCCTACAT ACTAATACAC TTACAACACA TACACCCCAA TACAACATAC      6900
     ACTACTCCGG ATGTACCCAA CAGATACCAG ATAAGAATAA GATTGTTATA TGATCCTCGA      6960
     GAATGGAAAA AACCCCAATT CTAGATAAGT CACCCACTGG TAGACTAAAC ATCCGTTCCC      7020
     CTAATTTAAA CAATTCCTTG CTTAAGCCTC ACCCCATCGT CACATTCCCA CGTTCAAAGC      7080
     TCGGAGCCGC AATCCCGAAA AACAAAAGTA TCGATTTCAA TAAACAAATT ATAAGAATCT      7140
     AAGAGCACTT GTATCCAAGA GCAAATGCAC TTGAATCCAA GAGAAACGCA AAGCTTTTTC      7200
     TCTTTACGAT CAGAATCCTA AAGTCTAAAG TCCATATTAG AAAAGCTCGA TACCGAGGCT      7260
     TGAACGTCAA CCAAATCAGA ATAATTATCA GAGTTCAGTT TGAGACCTAA TTGTAAAAGG      7320
     TTCGGTGTTC TTCTCAAATA AAAAGATTGT AATCATTTAG TGAAATAAAA ATTATATTTT      7380
     TTTCACTTAT AAATATTGCA AGTATTTAAT T                                     7411
//
ID   DMIS176    standard; DNA; INV; 7439 BP.
XX
AC   X01472; J01060; J01061;
XX
DR   FLYBASE; FBgn0000004; 17.6.
XX
FT   source          X01472:1..7439
FT   SO_feature      five_prime_LTR ; SO:0000425:1..512
FT   SO_feature      three_prime_LTR ; SO:0000426:6928..7439
FT   SO_feature      TATA_box ; SO:0000174:372..377
FT   SO_feature      TATA_box ; SO:0000174:7271..7277
FT   SO_feature      primer_binding_site ; SO:0005850:511..529
FT   SO_feature      polyA_signal_sequence ; SO:0000551:372..377
FT   SO_feature      polyA_signal_sequence ; SO:0000551:7299.7304
FT   SO_feature      RR_tract ; SO:0000435:6917..6927
FT   SO_feature      CDS ; SO:0000316:1074..2393
FT                   /db_xref="FLYBASE:FBgn0044339; 17.6\gag"
FT                   /db_xref="SWISS-PROT:P04282"
FT                   /protein_id="CAA25701.1"
FT                   /translation="MAQEPAIVPPLSDSNMTQVAYQIGNVEKFNGDPGSLYTFVSRIDY
FT                   ILALYATGDERQQQIIFGHIERSISGEVMRCIGAYDMYTWQQLRRQLVLNYKPQTPNHV
FT                   LLEEFRKTPFRGNVRAFLEEAESRRQTLTSKLELEQDLEEKTFYLKLIKSSIESLIEKL
FT                   PTHIYLRINNHNIPDLRSLINLLQEKGMYEQINHTSTHVQKQNFSDKPQKSFNQNTNQS
FT                   NNIRKYPTPFLHYNSPIPYQAPQIYQTPPTNNPLYRHPIPYHPNPNNVFQPSQQNNVFQ
FT                   PSQQNNAFQPNQRTNFTSRPIFNTNRNNAFDQNRFGQQPQYQNQQSTQNSSSYVPNRPI
FT                   KRLRPANSGQTGMSVDETLYQEDAFYQQCVPYDYFYYPTYDHSDYYPENQYQIDENNQN
FT                   LQRTQQLQQINTDETNNDNQEPNVEQAENFQPQALENPNI"
FT   SO_feature      CDS ; SO:0000316:2345..5518
FT                   /db_xref="FLYBASE:FBgn0014453; 17.6\pol"
FT                   /db_xref="SWISS-PROT:P04323"
FT                   /protein_id="CAA25702.1"
FT                   /translation="TGRKFSATSLGKPQYITIKYKENNLKCLIDTGSTVNMTSKNIFDL
FT                   PIQNTSTFIHTSNGPLIVNKSIIIPSKILFPTTNEFLLHPFSENYDLLLGRKLLAEAKA
FT                   TISYRDQEVTLYNNKYKLIEGIATHEQSHFQNVNMIPDTMLRQPNKISPILESDLYRLE
FT                   HLNNEEKQRLCALLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSKYSYPQAYEQE
FT                   VESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHP
FT                   IPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN
FT                   APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLD
FT                   KCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPN
FT                   FADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASD
FT                   VALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSD
FT                   HQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSRIKLEETYLSEQT
FT                   QHSAEEDNSDLIFITERPLNTFNRQVIFSKGPPDIKVTKYFKKHITQIFYDIMTREKAE
FT                   QYLIDHFCGKKSALYIESDADFEVIQAAHKLAINTKYTKILRSTILLKNITTYAEFKEL
FT                   ILTAHEKLLHPGIQKTTKLFGETYYFPNSQLLIQNIINECSICNLAKTEHRNTDMPTKT
FT                   TPKPEHCREKFMIDIYSSEGKHYVSCIDIYSKFATLEEIKTKDWIECKNALMRIFNQLG
FT                   KPKLLKADRDGAFSSLALKRWLESEEVELQLNTTKTGVADIERLHKTINEKIRIIKTSD
FT                   DEETKLSKMETVLNIYNHKTKHDTTGQTPAHIFLYAGQPILDTQQNKENKINKINNDRV
FT                   EYEVDTRYRKGPLQKGKLENPFKPTKNVEQTDSDHYKITNRNRITHYYKTQFKKRKKNN
FT                   QLSISQAPGT"
FT   SO_feature      CDS ; SO:0000316:5488..6903
FT                   /db_xref="FLYBASE:FBgn0027624; 17.6\env"
FT                   /db_xref="SWISS-PROT:P04283"
FT                   /protein_id="CAA25703.1"
FT                   /translation="SALNFTGTWHLITLLLMLITTVHGQQIEINNIDTNHGYLLFSDKP
FT                   VQIPSSFEHHCLRINLTEIDTIADYFEQRLRTDYHAPQVKFLYNKMRRELAGIALRHRN
FT                   KRGLINIVGSVFKYLFGTLDENDRVDIQRKLETNAHNSVNLHELNDAIQLINDGMQKIQ
FT                   NYENNSNIINSLLYELMQFTEYIEDVEMGMQLSRLGLFNPKLLNYDKLENVNSQNILNI
FT                   KTSTWINYNDNQLLIISHIPINFSLINTVKIIPYPDSNGYQLEYTDTQSYFERENKVYN
FT                   NENKEINNECVTNIIKHLKPICNFESIHTDEIIKYIEPNTIVTWNLTQTSLKQNCQNSF
FT                   NNIKIKGNKMIKVTQCKIEINSIILSENLFKPEIDLTPLYTPLNITKIKTVKHNDINEM
FT                   ISQNNITLYIFMTTVIIILILLYLYLRYVSFNPFMMLYAKLKLRKNQNQNTAQQIEMED
FT                   VPLPLLYPSIPAQV"
XX
CC   Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7439 BP;  2985 A; 1512 C; 1048 G; 1894 T; 0 other;
     AGTGACATAT TCACATACAA AACCACATAA CATAGAGTAA ACATATTGAA AAGCCGCATA        60
     CGTAAACAAT AAGTGACCAC CATGCTAATG TGGATCAAAT AACAAAAATA TCCACTCTGC       120
     ATTTTGACAC CCCCATACTG TATGCCATCT GCGCAGTATG CATTCTAATA AACAAATTCT       180
     TTGACAGCGG CACTTAGCCA TTCTTGTAAA CAAATCTTAA AGTCTGCCTG CTCTCTCTGA       240
     GGCTTCTCCT CCACTTAAGA ATCCAAGAGC AATGCTCTCC CAAAAACACT AACATATTCT       300
     TTAAGCAAGC ACAGAGGCTT CTCCTCATTT TCACTTTCAT TTGATTTTCA GTCTTAAGCT       360
     GAACGTTAAT CAATAAACAA CACAATCGAT ACCGAAATTT TGATTCGTTT TATTTTGGCA       420
     AAACTCAATT TTCAGCGTTG GTCTTAGTTC ATATTCGGAA CGGTCCATTT AATAGACTCA       480
     AAACTATTTA TTGCAACCAT TTATTTGCAA TTGGCGCAGT CGATGTGATC AGTGTTAAAG       540
     TTCCTTGATG CGGTAACCAG ATTTGCCAAT TCCTGTGTTC TTTTTGTTCT CTGACAAAAG       600
     TACCACGATA ACGGGCACCC ACGTGACGGT TAATATCGCT TTAAGTTTTT AATTAAACCT       660
     CGACAATAAA GTGAAACCGA AAAATCACAA TTTGCCTAAA CAAACCTGAA TTTATTATCA       720
     GGAAGACGCT ATTGAATTTG TGAGAGGCTG TAAATCCAAT TGGTTACCTC AAAGACCCAC       780
     GAAAAAGCTA TAGTGCAACC CTTGCGAAAA TCAAAACCTA TCTTAAAAAA AAAAAAAAAA       840
     TATAAATAAT AAATTAATAA GCGAAAATTA AAACGTATTA AAAGTAAGAA TAATAAATAA       900
     ATAAGTGAAA ATTCTATATG ATAAAAATTA AAAATAAGAA TAATAAATAA AAAGACAACA       960
     TTTTAAATTA AACAATATTA AAAAAATATA AAAATATTAA AAACTATATT AAAAAAAAAA      1020
     AAAAAACAAA AAAACAAAAA AAAAAAAATA AATAAATAAT CCAAAAATCA AAAATGGCTC      1080
     AAGAACCAGC AATTGTGCCA CCACTATCAG ACAGCAACAT GACCCAGGTT GCCTACCAGA      1140
     TTGGCAATGT GGAGAAATTC AACGGTGATC CAGGCTCACT ATACACCTTT GTGAGTCGAA      1200
     TTGATTACAT ACTGGCTCTT TATGCTACCG GAGATGAACG CCAACAGCAG ATCATATTTG      1260
     GGCATATTGA ACGCAGCATC AGCGGAGAAG TTATGCGCTG CATTGGAGCC TATGACATGT      1320
     ACACCTGGCA GCAGCTTAGA AGACAATTGG TACTCAACTA TAAACCCCAG ACCCCTAACC      1380
     ACGTTCTTTT AGAAGAGTTT CGAAAGACCC CATTTCGAGG CAATGTACGA GCATTCCTGG      1440
     AAGAAGCAGA AAGCCGCAGA CAAACACTTA CTAGTAAGCT TGAATTAGAG CAAGATCTTG      1500
     AAGAAAAGAC TTTTTATTTG AAATTAATAA AATCCAGTAT AGAATCACTA ATTGAAAAAT      1560
     TACCTACACA CATTTATTTA AGAATAAATA ACCACAACAT ACCAGATTTG CGATCACTTA      1620
     TAAACCTTTT ACAAGAGAAG GGCATGTACG AACAAATAAA TCATACAAGT ACACATGTCC      1680
     AAAAACAAAA TTTCTCTGAT AAGCCACAAA AGTCCTTTAA TCAAAATACT AATCAGTCTA      1740
     ACAATATCAG AAAATATCCA ACACCTTTCC TACATTATAA TTCACCAATA CCATATCAAG      1800
     CTCCACAAAT TTATCAAACA CCACCAACTA ATAACCCACT TTATCGTCAT CCAATACCCT      1860
     ACCACCCTAA TCCAAACAAT GTTTTTCAAC CAAGCCAACA AAACAATGTT TTCCAACCAA      1920
     GCCAACAAAA CAATGCTTTT CAACCAAATC AACGAACAAA CTTTACATCT CGACCAATTT      1980
     TTAACACCAA TCGAAACAAT GCATTCGATC AGAATAGGTT CGGACAACAA CCCCAATATC      2040
     AAAATCAACA ATCAACACAA AATTCAAGTT CCTATGTACC CAATCGACCA ATAAAACGAT      2100
     TAAGACCAGC TAATAGTGGA CAGACTGGGA TGAGTGTTGA CGAAACATTA TATCAAGAGG      2160
     ACGCTTTTTA TCAGCAGTGT GTTCCATATG ACTATTTTTA TTATCCAACT TACGACCATT      2220
     CAGACTATTA TCCAGAAAAT CAATATCAAA TTGACGAAAA CAACCAAAAT TTACAAAGAA      2280
     CACAACAGTT ACAGCAGATT AATACAGACG AGACAAACAA TGACAACCAA GAACCCAATG      2340
     TTGAACAGGC CGAAAATTTT CAGCCACAAG CCTTGGAAAA CCCCAATATA TAACAATTAA      2400
     ATACAAAGAA AATAATTTGA AATGCCTTAT TGATACCGGA TCAACAGTTA ACATGACATC      2460
     TAAAAATATA TTTGATTTAC CAATCCAGAA TACTAGTACT TTTATTCATA CCAGCAATGG      2520
     ACCGCTCATT GTCAACAAAA GTATAATCAT ACCTTCAAAG ATTTTGTTCC CAACAACAAA      2580
     TGAATTTTTA TTGCACCCTT TCTCTGAGAA TTACGATCTT TTATTAGGAA GAAAACTTTT      2640
     AGCAGAAGCA AAAGCAACAA TAAGTTACCG CGATCAAGAG GTAACTCTTT ACAACAACAA      2700
     ATACAAATTA ATAGAAGGAA TAGCAACACA TGAACAGAGT CATTTTCAAA ATGTAAATAT      2760
     GATACCTGAC ACCATGCTCA GACAGCCAAA TAAAATTTCA CCCATTTTAG AATCAGACCT      2820
     ATACAGATTG GAACATTTAA ATAACGAAGA AAAACAAAGA TTGTGCGCAC TCCTGCAGAA      2880
     ATACCATGAC ATACAGTACC ATGAAGGTGA TAAGTTGACA TTTACTAATC AAACCAAACA      2940
     TACTATCAAT ACAAAGCACA ATCTACCACT TTACTCTAAA TACAGTTACC CACAGGCTTA      3000
     TGAACAGGAG GTCGAAAGCC AAATACAAGA TATGCTAAAT CAAGGTATTA TACGTACCAG      3060
     TAATTCACCT TACAATAGCC CCATCTGGGT GGTTCCAAAG AAACAAGATG CATCAGGCAA      3120
     ACAGAAATTT AGAATTGTAA TAGACTACCG AAAATTAAAT GAAATAACAG TAGGAGACAG      3180
     ACACCCAATC CCAAACATGG ACGAAATCTT GGGAAAATTG GGCAGATGTA ATTACTTCAC      3240
     AACTATAGAC TTGGCAAAGG GTTTCCACCA GATCGAAATG GATCCAGAAT CAGTTTCAAA      3300
     GACAGCCTTT TCTACCAAGC ACGGTCATTA TGAATATTTG CGCATGCCAT TCGGATTAAA      3360
     AAACGCGCCA GCCACCTTTC AACGGTGCAT GAATGATATT TTAAGACCAC TCTTAAACAA      3420
     ACACTGTCTT GTGTATTTGG ACGACATAAT TGTATTCTCG ACATCCCTTG ATGAACACCT      3480
     GCAATCGCTC GGACTAGTTT TCGAAAAATT AGCAAAAGCC AACCTTAAAT TACAACTTGA      3540
     CAAATGTGAG TTTCTCAAGC AAGAAACCAC ATTTTTAGGA CATGTTCTAA CACCAGATGG      3600
     AATAAAACCA AACCCTGAAA AAATTGAAGC CATTCAAAAA TATCCAATTC CCACTAAACC      3660
     AAAAGAAATA AAAGCTTTTC TTGGACTGAC AGGATATTAT CGTAAATTTA TTCCAAACTT      3720
     TGCAGACATA GCCAAACCCA TGACTAAGTG TTTAAAAAAG AACATGAAAA TTGACACTAC      3780
     CAACCCAGAA TATGACTCTG CATTTAAAAA ATTAAAATAT CTAATATCAG AAGACCCAAT      3840
     TCTTAAAGTA CCCGACTTTA CAAAGAAATT CACTTTAACC ACAGACGCAA GTGATGTCGC      3900
     TTTGGGGGCA GTACTGTCAC AAGATGGACA CCCACTTAGC TACATTAGCC GAACACTTAA      3960
     TGAACACGAA ATAAATTACA GCACAATTGA AAAAGAACTC TTAGCAATTG TATGGGCGAC      4020
     AAAGACTTTT CGACACTACC TACTTGGAAG ACACTTTGAA ATATCCAGTG ACCATCAACC      4080
     ATTGAGCTGG TTGTACCGTA TGAAAGACCC AAATTCAAAA CTGACCCGAT GGAGAGTAAA      4140
     ATTATCCGAA TTCGATTTTG ATATAAAATA TATAAAAGGA AAAGAAAATT GCGTGGCGGA      4200
     TGCTCTGTCC AGAATAAAAC TTGAGGAGAC ATATTTGAGC GAACAAACCC AACATAGTGC      4260
     AGAAGAGGAC AATAGTGATT TAATTTTTAT TACAGAAAGA CCTCTAAATA CATTTAACAG      4320
     ACAAGTTATA TTTTCAAAAG GACCACCAGA CATTAAAGTT ACGAAATATT TCAAAAAACA      4380
     CATCACCCAA ATATTTTACG ACATTATGAC CAGGGAAAAA GCCGAACAAT ATTTGATAGA      4440
     CCATTTTTGT GGTAAGAAAA GTGCGTTGTA TATTGAGAGT GACGCTGATT TCGAAGTCAT      4500
     TCAAGCCGCA CATAAATTAG CCATAAACAC CAAATATACA AAAATCCTGC GTAGCACGAT      4560
     TTTGTTAAAA AACATAACCA CTTATGCGGA ATTTAAGGAA TTGATCTTGA CTGCTCATGA      4620
     AAAACTTCTA CACCCAGGCA TACAGAAAAC TACTAAACTT TTCGGAGAAA CTTACTATTT      4680
     CCCTAATAGC CAGCTACTTA TTCAGAATAT AATAAATGAG TGCAGTATTT GCAATCTGGC      4740
     AAAAACAGAG CACCGAAATA CAGACATGCC AACGAAAACC ACACCCAAAC CAGAACATTG      4800
     CCGCGAAAAA TTCATGATAG ACATTTACTC ATCCGAAGGC AAACATTACG TTAGTTGCAT      4860
     AGACATTTAT TCGAAATTTG CCACATTAGA AGAAATAAAA ACAAAAGACT GGATAGAATG      4920
     CAAAAACGCG CTTATGCGCA TATTCAACCA GCTTGGCAAG CCAAAGTTAC TAAAGGCGGA      4980
     CAGAGACGGC GCATTTTCCA GTTTAGCCCT CAAGAGATGG CTGGAGAGTG AGGAAGTCGA      5040
     ATTGCAGCTT AACACAACAA AAACTGGTGT GGCGGACATA GAAAGACTAC ATAAAACAAT      5100
     TAATGAAAAG ATTCGCATAA TCAAAACATC CGATGACGAA GAAACCAAAT TGAGCAAAAT      5160
     GGAAACAGTA CTTAACATAT ACAATCATAA AACCAAACAC GACACCACTG GACAGACCCC      5220
     TGCACACATA TTTCTCTACG CTGGACAACC AATATTAGAT ACCCAACAAA ACAAAGAAAA      5280
     CAAAATAAAC AAAATAAATA ATGACAGAGT GGAGTACGAA GTCGACACAA GATACAGAAA      5340
     AGGTCCACTA CAGAAAGGCA AATTAGAAAA TCCTTTTAAG CCAACAAAAA ATGTGGAGCA      5400
     GACTGACTCT GATCATTATA AAATTACTAA TAGAAATAGA ATTACTCACT ACTACAAAAC      5460
     ACAATTCAAA AAACGAAAGA AAAATAATCA GCTCTCAATT TCACAGGCAC CTGGCACTTG      5520
     ATAACATTGC TGCTGATGCT GATCACAACA GTTCATGGAC AACAAATTGA AATTAATAAT      5580
     ATTGACACAA ACCACGGATA TCTCCTTTTT TCTGATAAAC CAGTCCAGAT ACCATCATCC      5640
     TTTGAACATC ATTGCTTGAG AATCAATTTA ACTGAAATAG ACACCATAGC TGATTATTTT      5700
     GAGCAAAGAC TACGTACCGA CTACCATGCA CCCCAGGTCA AATTTTTATA CAACAAAATG      5760
     AGAAGAGAAC TAGCTGGAAT AGCCTTGCGA CATAGAAATA AACGGGGACT TATTAACATT      5820
     GTAGGTTCAG TTTTTAAATA CCTATTTGGC ACACTTGACG AAAATGATCG AGTGGATATA      5880
     CAGAGGAAAC TTGAAACAAA CGCCCATAAC TCGGTAAATT TACATGAACT CAATGACGCT      5940
     ATTCAATTAA TAAATGACGG AATGCAAAAG ATACAGAATT ATGAAAACAA CAGCAACATC      6000
     ATTAACAGTC TTTTATATGA ACTCATGCAG TTTACAGAAT ACATAGAAGA TGTGGAAATG      6060
     GGAATGCAGC TTTCCAGACT CGGTCTATTT AATCCCAAAC TACTAAACTA CGATAAACTT      6120
     GAGAATGTAA ACAGCCAAAA TATTTTAAAC ATTAAAACAT CCACTTGGAT TAATTACAAT      6180
     GATAACCAAT TATTAATCAT ATCTCACATA CCTATTAACT TTTCATTAAT AAATACAGTA      6240
     AAAATAATCC CTTACCCAGA CTCGAACGGC TATCAGCTAG AATACACAGA CACACAATCA      6300
     TATTTTGAAA GAGAAAATAA AGTTTACAAT AACGAAAATA AAGAAATAAA CAATGAGTGT      6360
     GTCACCAACA TTATTAAACA TTTAAAACCA ATTTGTAATT TTGAGTCAAT CCACACAGAT      6420
     GAAATAATAA AATACATAGA ACCAAACACA ATTGTAACCT GGAATTTAAC CCAAACAAGT      6480
     CTCAAACAAA ATTGTCAAAA TTCATTTAAT AATATAAAAA TAAAAGGAAA CAAAATGATA      6540
     AAAGTAACCC AATGTAAAAT AGAAATCAAT AGCATAATTC TAAGTGAAAA TCTCTTTAAA      6600
     CCAGAAATAG ATTTGACACC ATTATACACA CCACTTAACA TAACAAAAAT AAAAACTGTT      6660
     AAACACAACG ACATTAATGA AATGATTTCA CAAAACAATA TTACACTTTA CATATTTATG      6720
     ACTACTGTCA TCATTATACT TATTTTATTG TACTTATATT TAAGATACGT ATCATTTAAC      6780
     CCATTCATGA TGCTGTATGC AAAACTAAAA TTAAGAAAAA ATCAAAATCA AAACACAGCA      6840
     CAACAAATAG AAATGGAAGA CGTTCCATTA CCCCTACTAT ATCCATCAAT CCCAGCCCAA      6900
     GTATAGGCTT CTCTTTAAGG GAAGGGAAGT GACATATTCA CATACAAAAC CACATAACGT      6960
     AGAGTAAACA TATTGAAAAG CCGCATACGT CAACAATAAG TGACCACCAT GCTAATGTGG      7020
     ATCAAATAAC AAAAATATCC ACTCTGCATT TTGACACCCC CATACTGTAT GCCATCTGCG      7080
     CAGTATGCAT TCTAATAAAC AAATTCTTTG ACAGCGGCAC TTAGCCATTC TTGTAAACAA      7140
     ATCTTAAAGT CTGCCTGCTC TCTCTGAGGC TTCTCCTCCA CTTAAGAATC CAAGAGCAAT      7200
     GCTCTCCCAA AAACACTAAC ATATTCTTTA AGCAAGCACA GAGGCTTCTC CTCATTTTCA      7260
     CTTTCATTTG ATTTTCAGTC TTAAGCTGAA CGTTAATCAA TAAACAACAC AATCGATACC      7320
     GAAATTTTGA TTCGTTTTAT TTTGGCAAAA CTCAATTTTC AGCGTTGGTC TTAGTTCATA      7380
     TTCGGAACGG TCCATTTAAT AGACTCAAAA CTATTTATTG CAACCATTTA TTTGCAATT       7439
//
ID   DMTN1731   standard; DNA; INV; 4648 BP.
XX
AC   X07656;
XX
DR   FLYBASE; FBgn0000007; 1731.
XX
FT   source          X07656:1..4648
FT   SO_feature      five_prime_LTR ; SO:0000425:1..336
FT   SO_feature      three_prime_LTR ; SO:0000426:4313..4648
FT   SO_feature      TATA_box ; SO:0000174:110..116
FT   SO_feature      primer_binding_site ; SO:0005850:342..352
FT   SO_feature      CDS ; SO:0000316:431..1252
FT                   /db_xref="FLYBASE:FBgn0020768; 1731\gag"
FT                   /db_xref="REMTREMBL:CAA30502"
FT                   /protein_id="CAA30502.1"
FT                   /translation="MSNLYQIDKLEDGSYETWSIQMRSVLVHACLWKVVSGESVKPEVD
FT                   TGGAWQSQDEKALATIILSVKSSQLGYVKGCLTAAEAWKVLQDVHQPKGPLRTVMLYKK
FT                   LLSKRLLEGQSISSHIKEFKEIFDALDAVEIGITEKLRSVVLLSSLPESFENFVVAIET
FT                   RDDVPLFDALCIKLIEEDTRRGGAEQQREKQTESAKAFTAVHKPQAPAREARPSAKKRK
FT                   DVVCYNCGERRHFKANCRREKVNKESATQEQCSLLNALDSGGFWQNTVVSR"
FT   SO_feature      CDS ; SO:0000316:1203..4151
FT                   /db_xref="FLYBASE:FBgn0012032; 1731\RTase"
FT                   /db_xref="REMTREMBL:CAA30503"
FT                   /protein_id="CAA30503.1"
FT                   /translation="MRWIVVVFGKTQWCLDSGATSHMCCDRSVFTEFEEHTEKISLAGN
FT                   GFLLAKGIGTVKLKTDLCTLVLNNVLFVPDLNGNFMSVSRAAQYKCFVNFGPHYADVIQ
FT                   EGERILRVMRAGNLYMFQGKHNSCFAAVDADGSLWHKRNGHLNTSSLQEMVRKKMVYGV
FT                   EKVVFKPDAVCKTCMLAKIHVQPFPKTTRSRAEELLDMIHSDLCGPFSTPSLAGSKYFL
FT                   TFIDDKSRRIFVYFLRKKDEVFTKFVEFKKLVERQTGRKIKCIRSDNGGEFVNNVFDDY
FT                   LKAHGIARQLTIPHTPQQNGVAERANRTLVEMARCMLLQSELGEALWAEAINTAVYLRN
FT                   RSTSRALQSKTPMEEWTGKIPAVSHLRVFGAIAVALDKGVHKGKFESKGKEYRMIGYSI
FT                   AAKGYRLFDKEKRCVIEKQDVLFDESGSLVNHGNTIEFQFPATDDPEPQSDSNAREGDD
FT                   TEPVGSSDDYESAAEAEEAEVHVGPGRPKIVRTGRPGRPKKQYNVLGVLMASDVEIPKS
FT                   YEEAINSQYSAKWEEAMGLEYKALLANETWKLADLPRNRRCVACKWVYSLKRDVSGRIE
FT                   RFKARLVAKGCSQKFGVDYFETFSPVCRLESVRLILALAAEMQLYLHHMDVCTAYLNSE
FT                   LKDTVYMKQPQGFTDAANPDQVLLLRKAIYGLKQSGREWNSKLDGVLKDLGFKACNHEP
FT                   CLYQQSGQGNLMLILVYVDDLILACQSREDMEDLKAKISESFECTDKGPLHLFLGMEVQ
FT                   RDGDLGEITLGHSQYIKELLRDYGSENCRPATTPLDAGHQVLCAGEQCQKVDAGQYQST
FT                   IGELMWLGLTTRPDMLHSVAKLAQRNQDPHSEHMVAVKHILRYLASTVDVKLHYQKCGQ
FT                   AFTGFVDADWGGDRLDRKSYTGYVFFLSGGPVSWRSEKQQSVALSSTEAEYMALTTACK
FT                   EAIALRRLIVEIVCGDLKTPTVMHGDNLKCAAQLAKNPVHHSRTKHIDIRYH"
XX
CC   Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 4648 BP;  1316 A; 880 C; 1268 G; 1184 T; 0 other;
     TGTTGAATAT AGGCAATGCC CACATGTGTG TTGAATATAG GCAATTTCCA CATGTGCATA        60
     TGTAATTTTG TATGAGAACA TACATACATA CACATGAACT GTATGTATGT ATATATATTA       120
     GCAAATAAGC AGCCGCATGA AGGTGGCATT TTTATGTGTA TCAGTTTCAG TTTCAAATAA       180
     AACTTCTTCG TGTTCGGACA CGCGGCTCAA GACTTTTTAT TTCGCGTTTA CTCTTTCAGC       240
     CTTTGCTCTC AATTCGCTGA GTTTGGGTGA AGATTAGGAT CTTCCCATTA TGATTGTCAG       300
     TGTTCCACAC TTGGAGCACC TTTTCAATAA ACAACAGGTT AATGGGCCCA GCGCCCTAGG       360
     AGCTGCCTAA AGGAGAAACG TGTAGTGAAA CTCAGGAGTT AGATTTTGGA GTCTACTCAA       420
     GATTGCCGGA ATGAGTAACC TGTATCAGAT CGATAAGCTG GAGGATGGAT CCTATGAAAC       480
     GTGGAGCATC CAGATGCGTT CAGTGTTGGT GCACGCATGT TTGTGGAAGG TGGTTTCAGG       540
     AGAGTCCGTG AAACCTGAGG TTGATACTGG AGGTGCTTGG CAATCCCAAG ATGAAAAAGC       600
     ATTGGCCACG ATCATCTTGA GTGTGAAGTC TTCGCAACTT GGTTATGTAA AAGGGTGTCT       660
     CACTGCGGCT GAGGCATGGA AAGTTTTACA GGATGTCCAC CAGCCGAAAG GGCCGTTACG       720
     AACGGTCATG CTGTATAAGA AGTTGCTGAG CAAACGTCTG TTGGAAGGGC AGAGTATATC       780
     GTCACATATT AAAGAATTTA AGGAAATCTT TGATGCCCTT GATGCGGTGG AAATTGGTAT       840
     CACCGAGAAA TTGCGCAGTG TTGTTTTGCT GTCGAGCCTT CCAGAGAGTT TCGAGAATTT       900
     CGTTGTCGCC ATTGAGACGC GCGACGACGT GCCGCTTTTC GATGCTCTAT GTATAAAGCT       960
     GATCGAGGAA GACACGAGAA GGGGAGGAGC GGAGCAGCAG AGAGAAAAAC AAACGGAGAG      1020
     CGCAAAGGCA TTTACTGCAG TACATAAGCC ACAGGCGCCG GCGAGAGAAG CTCGGCCGAG      1080
     CGCAAAGAAG AGGAAAGACG TAGTTTGTTA TAACTGTGGA GAGCGTAGGC ATTTTAAAGC      1140
     GAACTGTCGT CGCGAGAAAG TAAACAAAGA GAGCGCGACA CAAGAACAAT GCAGTTTGTT      1200
     AAATGCGCTG GATAGTGGTG GTTTTTGGCA AAACACAGTG GTGTCTCGAT AGCGGGGCTA      1260
     CCAGTCACAT GTGCTGTGAC AGAAGTGTTT TTACTGAGTT TGAAGAGCAC ACTGAAAAAA      1320
     TTAGTCTTGC TGGAAATGGA TTCCTACTAG CAAAGGGCAT AGGAACAGTG AAGCTGAAGA      1380
     CTGATTTATG TACTCTGGTA TTGAATAACG TACTCTTCGT CCCAGATTTG AACGGCAACT      1440
     TTATGTCAGT CAGCCGTGCA GCTCAGTATA AATGTTTTGT CAATTTTGGA CCACATTACG      1500
     CTGACGTCAT TCAGGAAGGC GAGCGAATAC TGCGTGTAAT GAGAGCTGGT AATTTATATA      1560
     TGTTTCAAGG GAAACATAAC AGTTGTTTTG CGGCCGTTGA TGCTGATGGT TCACTATGGC      1620
     ATAAAAGGAA TGGCCATTTG AATACAAGCA GCCTACAGGA GATGGTGAGG AAGAAGATGG      1680
     TGTACGGTGT TGAAAAGGTC GTTTTCAAAC CAGACGCAGT ATGCAAGACG TGCATGCTGG      1740
     CAAAAATCCA TGTGCAACCA TTTCCGAAGA CAACGAGGAG CAGAGCTGAG GAGCTGTTGG      1800
     ATATGATCCA TTCAGACCTG TGCGGGCCAT TTAGCACACC GTCACTTGCT GGATCAAAGT      1860
     ACTTTCTCAC TTTCATAGAC GACAAGTCCA GGCGGATTTT TGTATATTTC TTGCGGAAGA      1920
     AGGACGAAGT CTTCACTAAG TTTGTCGAGT TTAAGAAACT GGTCGAGCGA CAAACAGGTA      1980
     GAAAGATAAA ATGTATCCGG AGCGATAATG GTGGTGAGTT CGTCAATAAT GTTTTTGATG      2040
     ACTATTTAAA GGCACATGGG ATCGCTAGAC AGCTGACTAT TCCACACACT CCCCAACAAA      2100
     ATGGAGTTGC AGAACGAGCC AACCGCACGC TAGTAGAAAT GGCTAGGTGC ATGTTGCTGC      2160
     AATCGGAGTT GGGTGAGGCT CTATGGGCTG AGGCGATAAA CACTGCGGTG TATCTGAGGA      2220
     ACCGATCAAC GAGCAGAGCA TTACAAAGCA AAACCCCTAT GGAAGAGTGG ACCGGAAAAA      2280
     TACCAGCAGT GAGCCACTTG AGGGTTTTTG GTGCCATAGC AGTGGCATTG GACAAAGGAG      2340
     TCCATAAAGG CAAATTCGAA TCCAAAGGAA AGGAATATCG TATGATTGGA TATTCAATAG      2400
     CTGCTAAGGG GTACCGTCTG TTTGACAAAG AGAAGCGGTG TGTGATCGAG AAGCAAGATG      2460
     TCCTTTTTGA TGAGTCTGGT AGTTTGGTAA ATCATGGAAA TACCATTGAG TTCCAGTTTC      2520
     CCGCAACTGA TGACCCGGAG CCGCAGAGTG ATTCGAATGC ACGGGAAGGT GACGATACAG      2580
     AACCCGTGGG CAGCAGCGAC GACTATGAGA GTGCAGCTGA GGCAGAAGAA GCTGAAGTAC      2640
     ATGTGGGGCC TGGACGGCCA AAGATTGTTC GGACGGGCAG ACCAGGGCGC CCGAAGAAGC      2700
     AATACAATGT ACTTGGCGTG TTGATGGCTA GCGACGTCGA AATTCCCAAG TCCTATGAGG      2760
     AGGCCATCAA TTCGCAGTAT TCTGCAAAGT GGGAAGAGGC AATGGGCCTG GAGTACAAGG      2820
     CGCTACTTGC AAATGAGACA TGGAAGCTGG CTGACTTACC AAGAAATCGC CGGTGTGTGG      2880
     CTTGCAAGTG GGTGTATTCC CTGAAACGAG ACGTCTCTGG TAGAATTGAG CGCTTCAAGG      2940
     CACGACTAGT AGCAAAGGGG TGTTCGCAGA AGTTCGGAGT GGACTACTTC GAGACTTTTT      3000
     CACCCGTGTG CAGGCTCGAG AGTGTGAGGC TCATTTTGGC ATTGGCAGCA GAGATGCAAT      3060
     TGTACTTGCA TCACATGGAC GTATGCACGG CGTACTTAAA TAGCGAGCTA AAGGATACTG      3120
     TGTACATGAA GCAGCCCCAA GGGTTCACAG ATGCTGCTAA TCCCGACCAG GTGTTATTGC      3180
     TGAGGAAGGC AATATACGGC TTGAAGCAGT CAGGCAGAGA GTGGAACTCC AAGCTCGACG      3240
     GTGTTCTAAA AGACTTGGGA TTTAAGGCCT GTAATCATGA ACCATGTCTT TATCAGCAAA      3300
     GTGGTCAAGG TAATCTGATG CTCATCTTAG TATATGTTGA TGATTTAATT CTAGCGTGCC      3360
     AGTCAAGAGA AGATATGGAG GATCTGAAAG CCAAGATTTC AGAGTCTTTC GAGTGCACGG      3420
     ACAAGGGTCC ACTGCATTTG TTCTTAGGCA TGGAGGTGCA ACGAGATGGC GACCTTGGAG      3480
     AAATCACTTT GGGCCATTCG CAATATATCA AGGAACTATT GCGGGATTAT GGCAGCGAGA      3540
     ACTGTAGACC AGCGACGACA CCTTTGGATG CAGGGCATCA AGTTTTGTGC GCGGGTGAGC      3600
     AGTGCCAGAA GGTCGACGCA GGGCAGTATC AGTCTACAAT TGGTGAGCTA ATGTGGCTTG      3660
     GGCTTACTAC CAGACCAGAC ATGCTACATT CGGTGGCGAA GTTGGCTCAG AGGAATCAGG      3720
     ACCCGCATTC TGAGCACATG GTGGCTGTGA AGCACATCCT CCGGTACTTG GCGTCAACTG      3780
     TGGACGTCAA GCTGCATTAT CAAAAGTGCG GTCAGGCATT TACCGGCTTT GTGGATGCAG      3840
     ATTGGGGAGG CGACCGTTTG GACCGAAAGT CATACACAGG GTATGTGTTT TTCCTGTCTG      3900
     GCGGACCAGT ATCATGGAGG TCCGAGAAGC AGCAGAGCGT GGCGTTGAGC AGTACTGAAG      3960
     CCGAGTATAT GGCTCTGACC ACGGCTTGCA AGGAAGCTAT AGCTTTACGA AGGCTAATAG      4020
     TGGAGATCGT ATGCGGTGAT CTGAAGACCC CGACGGTTAT GCATGGCGAC AACCTGAAGT      4080
     GCGCAGCACA GTTAGCGAAG AACCCGGTTC ATCACTCTAG GACGAAGCAC ATCGACATTC      4140
     GATATCATTA GAGAAGTCAT GAAAGAGGGT CACGTTGTGT TAGAGTACAC TTCTACGAAT      4200
     GAGATGATAG CAGACATTAT GACAAAGAAT CTTTCAAAGG GAAAGCATAA TGGGTTTATG      4260
     AAAATGTTAA ATTTGTTTTA ATTTTTGTAA ACATGTTGGC ATTGAGGAAG GCTGTTGAAT      4320
     ATAGGCAATG CCCACATGTG TGTTGAATAT AGGCAATTTC CACATGTGCA TATGTAATTT      4380
     TGTATGAGAA CATACATACA TACACATGAA CTATATGTAT GTATATATAT TAGTAAATAA      4440
     GCAGCCGCAT GAAGCTGGCA TTTTTATGTG TATCAGTTTC AGTTTCAAAT AAAACTTCTT      4500
     CGTGTTCGGA CGCTCGGCTC AAGACTTTTT ATTTCGCGTT TACTCATTCG GCCTTTGCTC      4560
     TCAATGCGCT GAGTTTGGGT GAAGATTAGG ATCTTCCCAT TATGGTTGTC AGTGTTCCAC      4620
     ACTGGGAGCA CCTTTTCAAC AAACCACA                                         4648
//
ID   DMIS297    standard; DNA; INV; 6995 BP.
XX
AC   X03431;
XX
DR   FLYBASE; FBgn0000005; 297.
XX
FT   source          X03431:1..6995
FT   SO_feature      five_prime_LTR ; SO:0000425:1..414
FT   SO_feature      three_prime_LTR ; SO:0000426:6582..6995
FT   SO_feature      TATA_box ; SO:0000174:276..282
FT   SO_feature      TATA_box ; SO:0000174:6857..6863
FT   SO_feature      polyA_signal_sequence ; SO:0000551:304..309
FT   SO_feature      polyA_signal_sequence ; SO:0000551:6885..6890
FT   SO_feature      primer_binding_site ; SO:0005850:414..431
FT   SO_feature      RR_tract ; SO:0000435:6571..6581
FT   SO_feature      CDS ; SO:0000316:803..2047
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044338; 297\gag"
FT                   /db_xref="SWISS-PROT:P20828"
FT                   /protein_id="CAA27159.1"
FT                   /translation="MSQPIIALSDINLAEARRQLKDIMPFKGDPETLHTFISRVDYVIS
FT                   LYQTNDVRQQRILLGAIERNLDGQITRSLGLPNVEDWPTLKARLIAEFKIQTPNYKLLE
FT                   NFRETPYRGSLRAFCEEAERRRQLLISKLHLEGNQSDFLIYIQGIKESIKILIRKLPIQ
FT                   LFTILAHHDITDLRSLITIAQNEGIYEEHINFEFYEKPEYRNKNSNSNQNSKTQKFNTN
FT                   VQTQNRPSYSQYSQPFQPNFNQYIQPFRPSYTQQITNNPPMWHAPNYFRPNQYINPQPI
FT                   IQKNHFQQYPNKAQFPQTTHFRGNTYPRLQQPSTYKNTNFPITKRLRPSDSEQTKMSID
FT                   EIRFQDAHEFEQVQPNYYEQQYFNQNQYNPYQNHSFINEGQQQVQFVQINNKQNQNNSE
FT                   LNENFRLTVPENTNT"
FT   SO_feature      CDS ; SO:0000316:<1999..5178
FT                   /db_xref="FLYBASE:FBgn0027622; 297\pol"
FT                   /db_xref="SWISS-PROT:P20825"
FT                   /protein_id="CAB57796.1"
FT                   /translation="TKRKFSVNSSGKYEYIKIVYKGRSYKCLLDTGSTINMINENIFCL
FT                   PIQNSRCEVLTSNGPITLNDLIMLPRNSIFKKTEPFYVHRFSNNYDMLIGRKLLKNAQS
FT                   VINYKNDTVTLFDQTYKLITSESERNQNLYIQRTPESIASSDQESIKKLDFSQFRLDHL
FT                   NQEETFKLKGLLNKFRNLEYKEGEKLTFTNTIKHVLNTTHNSPIYSKQYPLAQTHEIEV
FT                   ENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPI
FT                   PNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA
FT                   PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDK
FT                   CEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNY
FT                   ADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNL
FT                   ALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDH
FT                   QPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSRIKIEENHHSEATQ
FT                   HSAEEDNSNLIHLTEKPINYFKKQIIFIKSDKNKVEHSKIFGNSITTIQYDVMTLEKAK
FT                   QILLDHFIHRNITIYIESDVDFEIVQRAHIEIVNTTYTKVIRSLFLLKNVGSYAEFKEI
FT                   ILQSHEKLLHPGIQKMTKLFKENHFFPNSQLLIQNIINECNICNLAKTEHRNTKMPLKI
FT                   TPNPEHCREKFVVDIYSSEGKHYISCIDIYSKFATLEQIKTKDWIECRNALMRIFNQLG
FT                   KPKLLKADRDGAFSSLALKRWLEEEEVELQLNTAKNGVADVERLHKTINEKIRIINSSD
FT                   DEEVKLSKIETILYTYNQKIKHDTTGQRPAQIFLYAGHPILDTQKIKEKKIEKINEDRR
FT                   EFNIDTNYRKGPLQKGKLENPFKPTKNVEQTDPDHYKITNRNRVTHYYKTQFKKQKKNN
FT                   KLSISQAPGTR"
FT   SO_feature      CDS ; SO:0000316:5145..6560
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0027623; 297\env"
FT                   /db_xref="SWISS-PROT:P20829"
FT                   /protein_id="CAB57797.1"
FT                   /translation="TLNFTGTWYPITLLFILITAVHGQQIQINNIDTNHGYLLFSDKPV
FT                   QIPSSFEHHSLKINLTEIDIVVDYFEQRLRTDYHAPQINFLYNKIKRELARITLKHRNK
FT                   RGFINIVGSGFKYLFGTLDENDRVEIQKKLEINVHNSVKLHELNDAIRLINDGMQKIQN
FT                   YENNHTIIDSLLFELMQFTEYIEDLEMAMQLSRLGLFNPKLLNYDKLENVNSQNILNIK
FT                   TSTWINYNDNQVLIISHIPIYLSLISTIKIIPYPDSNGYQLDYTDTQSYFEKENKVYNT
FT                   ENKEVKNECVTNIIKHLNPICNFKPVHTNEIIKYIEPNTIVTWNLTQTILNQNCQNSIN
FT                   KIKIEGNKMIRVTQCKIEINNINFSETLLEPEIDLTPLYTPLNITKIKIVKHNDIIEMI
FT                   SENNITLYIQMIIVIIALILLYSYLRYVSFKPFMMLYAKLKIRKNQNQNTPQQTEIEEI
FT                   PFPTLYPSIPAQV"
XX
CC   Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 6995 BP;  2811 A; 1356 C; 972 G; 1856 T; 0 other;
     AGTGACGTAT TTGGGTGGTC CAAACCAGCC ACTTCCATTA TTTCAAAGAA ATCAGTAATG        60
     CACTCTAGTA ATTTTCCATA ACTGTATCCC AGCTGCGCAG ACTCGTTTAT CTTTTGCAGC       120
     GCAGCGTTCT TTGTAAACAT CCTAAAGACC TGCCTAAGCA GATTTGACTG CCCTCTTTCA       180
     ACGCTACCTA ATCTTAAGAA CCCAAGAGCG AGGCTCTCCC GAAATACAAA TATTGTTCAA       240
     ATACTGAGGC TTCTCCTCAA TCCAATTTGC ATTTGATTTT TAGTCTTAAG CTGAGATCCA       300
     AAGAATAAAG TCGTGAAACT ATTTCTCCTA AAAACTATTT TTTATTTCTT GGCGTTGTCC       360
     TTAGTCAACT GACGGGACAT TAGTTCGACT CATAAATAAA ACAACAATTT TACTGGCGCA       420
     GTCGGTAGGA TACAAAAGTA TCCGAAAAAA AAGAACCTTC GAATGGAAAA TAAGTTAAAT       480
     TTTATAGTCC TGTGCTCGAA ACATCTCCCA AAATAAATTC GTGAAAACTC TTCAACTTCA       540
     ATTATAATTC CAATTCGGTT ATCCAATAAT AAGTGGAAGT GAAATACGAA ACAAAAATAT       600
     TAAGTCCAAA GGCAACTAAG TTTTAAAACC AACATATAAA AATAAAAAAT TAAAACAATA       660
     TAGAATTTTA ATAATACAAC ACAAAAATTT ACAAAACAAA AAAACAAACA AGTGAAACTA       720
     GAAAGCTTAA AAATAATAAT AACATTGAAT CCGAAACAAA ACAAAAAAAT AAAACACAAA       780
     AGTTAAAAAT TTTACAATAA AAATGTCACA ACCAATTATT GCGCTGAGCG ACATAAACCT       840
     TGCCGAAGCC CGTCGGCAGC TTAAAGACAT TATGCCATTC AAGGGTGATC CAGAAACCCT       900
     TCACACCTTT ATCAGCAGAG TGGATTACGT AATTTCGCTC TACCAAACAA ATGATGTCCG       960
     ACAACAGAGG ATTCTACTGG GAGCCATCGA AAGGAACTTG GACGGACAAA TTACACGATC      1020
     TTTGGGACTT CCGAACGTCG AAGATTGGCC TACCCTTAAA GCAAGACTCA TCGCGGAATT      1080
     TAAAATTCAA ACACCAAACT ACAAACTTCT GGAGAACTTC AGGGAGACAC CATACAGAGG      1140
     AAGCCTAAGA GCATTCTGCG AAGAAGCGGA GAGACGACGT CAATTACTAA TTTCGAAACT      1200
     ACACCTGGAA GGTAACCAAT CGGATTTTCT TATTTATATT CAGGGTATTA AAGAATCTAT      1260
     TAAGATACTG ATAAGGAAAC TACCAATACA ATTATTCACT ATTTTAGCCC ATCACGATAT      1320
     TACAGACTTA AGATCCTTAA TTACCATTGC ACAAAATGAG GGAATTTATG AAGAACACAT      1380
     TAATTTTGAA TTTTATGAAA AACCAGAATA TCGTAATAAA AATTCAAATT CTAACCAGAA      1440
     TTCGAAAACA CAAAAATTCA ATACAAATGT TCAAACTCAA AATCGACCAA GTTACTCACA      1500
     ATATTCCCAA CCCTTCCAAC CTAATTTTAA TCAATACATT CAACCATTTA GACCTAGCTA      1560
     TACACAGCAG ATAACTAACA ACCCACCCAT GTGGCACGCA CCTAATTATT TCAGACCCAA      1620
     CCAATACATA AACCCACAAC CCATTATTCA AAAAAATCAT TTCCAACAAT ATCCCAACAA      1680
     AGCCCAATTT CCCCAAACAA CGCATTTTAG AGGAAATACA TACCCTCGAC TACAACAACC      1740
     CTCTACATAT AAAAATACTA ACTTCCCGAT TACTAAACGA CTAAGACCAT CGGACAGTGA      1800
     ACAAACTAAA ATGTCTATTG ACGAAATTAG ATTCCAAGAC GCGCATGAAT TCGAACAAGT      1860
     CCAACCTAAT TATTACGAGC AACAGTATTT TAACCAAAAT CAATACAATC CGTATCAAAA      1920
     TCATAGCTTC ATTAATGAAG GGCAACAACA AGTTCAATTT GTACAAATTA ATAACAAACA      1980
     AAACCAAAAT AATTCTGAAC TAAACGAAAA TTTTCGGTTA ACAGTTCCGG AAAATACGAA      2040
     TACATAAAAA TAGTATACAA AGGGCGTTCA TACAAATGCC TTCTAGACAC AGGATCAACA      2100
     ATTAATATGA TCAATGAAAA TATATTTTGT CTTCCCATTC AAAATAGTAG ATGTGAAGTT      2160
     TTAACATCAA ATGGCCCTAT TACCTTGAAC GACTTGATTA TGTTACCCAG AAATAGTATT      2220
     TTCAAAAAAA CCGAACCATT TTATGTGCAC AGATTTTCTA ATAATTACGA TATGCTAATT      2280
     GGCAGAAAAT TGTTGAAAAA TGCTCAATCA GTTATTAATT ACAAAAATGA TACAGTTACC      2340
     CTTTTTGATC AAACATACAA ATTAATTACT TCAGAATCCG AAAGAAACCA AAATTTGTAT      2400
     ATCCAAAGGA CACCAGAATC AATTGCAAGC TCAGATCAGG AATCAATAAA AAAATTAGAT      2460
     TTTTCACAGT TTCGATTAGA TCACCTAAAT CAGGAGGAAA CTTTTAAGTT AAAAGGCTTG      2520
     TTAAATAAAT TTAGAAATCT TGAATATAAG GAGGGAGAGA AATTAACATT TACAAATACA      2580
     ATTAAACACG TACTAAATAC AACACATAAC TCCCCAATTT ATTCGAAACA ATACCCACTT      2640
     GCGCAAACAC ACGAAATCGA AGTAGAAAAC CAAGTACAGG AAATGCTGAA TCAGGGATTA      2700
     ATTAGGGAAA GTAATTCTCC ATACAATAGT CCTACTTGGG TCGTACCAAA GAAACCGGAT      2760
     GCTTCTGGTG CAAATAAGTA CAGGGTAGTA ATTGATTATA GAAAGCTAAA TGAAATAACC      2820
     ATACCTGACA GATATCCAAT TCCAAATATG GACGAAATTC TTGGCAAACT GGGTAAATGC      2880
     CAATATTTTA CAACGATCGA TCTGGCAAAG GGATTTCATC AAATAGAAAT GGACGAAGAA      2940
     TCAATTTCTA AAACTGCATT CTCCACAAAA AGCGGTCATT ACGAATACCT TCGAATGCCA      3000
     TTTGGCCTTA GGAATGCACC CGCTACTTTT CAAAGGTGCA TGAATAATAT CCTTCGACCG      3060
     TTGCTTAACA AACACTGTTT GGTGTATCTG GATGATATTA TAATTTTTTC AACATCCCTT      3120
     ACAGAACATT TAAATTCAAT ACAATTAGTT TTTACAAAGC TTGCAGATGC AAATTTAAAA      3180
     TTGCAACTAG ACAAATGTGA GTTCTTAAAA AAGGAAGCTA ACTTTCTTGG TCACATAGTT      3240
     ACCCCTGATG GTATTAAACC AAATCCTATT AAAGTTAAAG CCATAGTTTC ATACCCAATT      3300
     CCGACAAAAG ATAAAGAGAT AAGAGCTTTC CTTGGATTAA CAGGTTATTA TCGCAAATTT      3360
     ATTCCAAATT ACGCAGACAT AGCAAAACCC ATGACCAGCT GCTTAAAAAA AAGGACAAAG      3420
     ATAGATACAC AAAAACTTGA GTACATAGAG GCATTCGAAA AACTTAAGGC TTTGATAATT      3480
     CGTGACCCAA TTTTACAATT ACCTGATTTT GAAAAGAAAT TTGTTTTAAC CACAGATGCA      3540
     AGTAACTTGG CCCTCGGGGC TGTCCTTTCT CAAAACGGTC ATCCTATATC TTTTATTAGT      3600
     AGAACACTTA ACGATCACGA ATTAAATTAC AGTGCTATCG AAAAAGAATT ACTTGCCATA      3660
     GTTTGGGCCA CAAAAACTTT TCGACATTAT TTACTAGGAC GACAATTTCT CATTGCCAGT      3720
     GACCATCAAC CTCTTAGATG GCTTCATAAC TTAAAGGAAC CAGGTGCTAA GTTAGAAAGA      3780
     TGGAGAGTTA GATTAAGCGA ATACCAATTT AAAATAGATT ATATTAAAGG GAAAGAAAAT      3840
     TCAGTTGCCG ATGCATTATC AAGAATTAAA ATTGAAGAAA ATCATCATAG TGAAGCTACT      3900
     CAACATAGTG CAGAAGAGGA CAATAGCAAC CTTATTCATT TAACAGAAAA ACCAATAAAT      3960
     TATTTCAAAA AACAAATAAT CTTTATTAAA TCCGATAAAA ATAAAGTAGA GCATTCAAAA      4020
     ATATTCGGTA ACTCCATTAC CACAATTCAA TATGACGTAA TGACACTTGA AAAGGCCAAA      4080
     CAAATTTTAC TCGATCACTT TATCCATAGA AACATTACCA TTTATATTGA GAGCGATGTA      4140
     GATTTTGAAA TCGTTCAAAG AGCACACATA GAAATTGTTA ATACCACCTA CACAAAAGTA      4200
     ATTCGCAGTC TTTTCCTATT AAAGAACGTT GGTTCATACG CCGAATTCAA AGAAATCATA      4260
     CTTCAATCAC ATGAAAAACT TTTACACCCT GGTATACAGA AAATGACAAA ATTATTTAAA      4320
     GAAAATCACT TCTTTCCAAA TAGCCAACTA TTAATTCAGA ATATAATAAA CGAATGCAAC      4380
     ATATGCAATT TGGCCAAAAC AGAACATAGA AACACCAAAA TGCCTTTAAA AATCACACCC      4440
     AACCCGGAAC ATTGCCGAGA AAAATTTGTA GTAGATATTT ATTCATCTGA GGGAAAACAT      4500
     TACATCAGTT GCATTGATAT TTATTCTAAA TTCGCTACAC TTGAGCAAAT TAAAACTAAG      4560
     GATTGGATAG AATGCAGAAA CGCATTAATG CGCATTTTTA ATCAACTAGG AAAACCCAAA      4620
     TTATTAAAGG CAGACAGAGA CGGAGCTTTC TCCAGTTTAG CTTTAAAGCG ATGGCTTGAA      4680
     GAAGAAGAAG TCGAATTACA GCTCAATACA GCAAAAAACG GAGTAGCAGA CGTCGAAAGA      4740
     TTACACAAAA CAATAAATGA AAAAATTCGT ATAATCAATT CATCTGATGA TGAAGAAGTA      4800
     AAATTAAGCA AGATAGAAAC AATCCTCTAC ACATACAACC AAAAAATTAA ACATGACACT      4860
     ACTGGACAGA GACCTGCTCA AATTTTCTTA TACGCTGGGC ATCCCATATT AGACACTCAA      4920
     AAAATTAAAG AGAAGAAAAT AGAGAAAATA AATGAAGACA GACGGGAATT TAATATTGAC      4980
     ACTAATTACA GAAAAGGTCC ACTACAGAAA GGCAAATTAG AAAACCCATT TAAACCAACC      5040
     AAAAATGTAG AACAGACAGA CCCTGACCAT TACAAAATCA CTAATAGAAA TAGAGTTACG      5100
     CACTACTACA AAACACAATT CAAAAAACAA AAGAAAAATA ATAAACTCTC AATTTCACAG      5160
     GCACCTGGTA CCCGATAACA CTATTGTTTA TACTGATCAC AGCTGTTCAT GGACAACAAA      5220
     TTCAAATTAA TAATATTGAC ACCAACCACG GATATCTCCT TTTTTCTGAT AAGCCAGTAC      5280
     AGATACCATC CTCCTTTGAA CATCACTCCT TAAAAATCAA TTTAACTGAA ATAGACATCG      5340
     TGGTTGACTA TTTTGAGCAA AGACTACGAA CCGATTACCA TGCACCCCAG ATCAATTTTT      5400
     TATACAATAA AATAAAAAGA GAACTAGCCA GAATAACCCT GAAACATAGA AACAAACGGG      5460
     GTTTTATTAA CATTGTGGGT TCAGGTTTTA AATACCTATT TGGAACACTA GATGAAAATG      5520
     ATCGAGTCGA AATACAGAAA AAACTTGAAA TCAACGTCCA TAACTCAGTA AAATTACATG      5580
     AACTCAACGA CGCCATACGA TTGATAAATG ACGGAATGCA AAAAATACAG AATTATGAAA      5640
     ATAACCACAC CATCATTGAC AGTCTTTTGT TCGAACTAAT GCAGTTTACG GAATACATAG      5700
     AAGATTTGGA AATGGCTATG CAGCTTTCCA GACTTGGACT GTTTAACCCC AAATTACTAA      5760
     ACTACGACAA ACTTGAAAAT GTGAACAGCC AAAACATTTT GAACATTAAA ACATCCACTT      5820
     GGATTAACTA CAATGATAAC CAAGTATTAA TCATATCCCA CATACCCATT TACCTTTCAC      5880
     TAATAAGCAC AATTAAAATA ATTCCTTACC CAGACTCCAA CGGCTATCAG CTAGATTACA      5940
     CAGACACACA ATCATATTTT GAAAAAGAAA ATAAAGTTTA TAATACCGAA AATAAAGAAG      6000
     TAAAAAATGA ATGTGTCACC AATATTATTA AACACTTAAA TCCAATTTGT AATTTTAAGC      6060
     CAGTACACAC GAACGAAATA ATAAAATACA TAGAACCAAA CACAATTGTA ACTTGGAACT      6120
     TAACCCAAAC AATTCTTAAC CAAAATTGCC AAAATTCAAT TAATAAAATA AAAATAGAAG      6180
     GAAACAAAAT GATAAGAGTA ACGCAATGCA AAATAGAAAT CAATAATATA AATTTTAGTG      6240
     AAACTCTGTT AGAACCAGAA ATAGATTTGA CACCACTATA CACACCACTT AATATAACAA      6300
     AAATAAAAAT TGTAAAACAC AACGACATTA TTGAGATGAT TTCAGAGAAC AATATTACAC      6360
     TTTACATACA AATGATCATT GTAATAATCG CACTAATTTT GTTGTACTCA TATTTAAGAT      6420
     ATGTATCATT TAAACCATTT ATGATGTTGT ATGCAAAACT TAAAATAAGA AAAAATCAAA      6480
     ATCAAAACAC ACCACAACAA ACAGAAATAG AAGAAATTCC ATTTCCCACA CTATATCCAT      6540
     CAATCCCAGC CCAAGTATAG GCTTCTCTTT AAGGGAAGGG GAGTGACGTA TTTGGGTGGT      6600
     CCAAACCAGC CACTTCCATT ATTTCAAAGA AATCAGTAAT GCACTCTAGT AATTTTCCAT      6660
     AACTGTATCC CAGCTGCGCA GACTCGTTTA TCTTTTGCAG CGCAGCGTTC TTTGTAAACA      6720
     TCCTAAAGAC CTGCCTAAGC AGATTTGACT GCCCTCTTTC AACGCTACCT AATCTTAAGA      6780
     ACCCAAGAGC GAGGCTCTCC CGAAATACAA ATATTGTTCA AATACTGAGG CTTCTCCTCA      6840
     ATCCAATTTG CATTTGATTT TTAGTCTTAA GCTGAGATCC AAAGAATAAA GTCGTGAAAC      6900
     TATTTCTCCT AAAAACTATT TTTTATTTCT TGGCGTTGTC CTTAGTCAAC TGACGGGACA      6960
     TTAGTTCGAC TCATAAATAA AACAACAATT TTACT                                 6995
//
ID   DM23420    standard; DNA; INV; 6126 BP.
XX
AC   U23420;
XX
DR   FLYBASE; FBgn0005384; 3S18.
XX
SY   synonym: BEL
XX
FT   source          U23420:1..6126
FT   SO_feature      five_prime_LTR ; SO:0000425:1..361
FT   SO_feature      three_prime_LTR ; SO:0000426:5766..6126
FT   SO_feature      CDS ; SO:0000316:919..5742
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044337; 3S18\ORF"
FT                   /db_xref="REMTREMBL:AAB03640"
FT                   /protein_id="AAB03640.1"
FT                   /translation="MFIGSIASNSSLTDCQRFHYLKSYLAGDALALVKHIPVTNDNYRE
FT                   AWERLEQRYNKQSLIIRSFLNSFMSLPSAINSNIGTVRKIADGADEVIRGLRALNCEER
FT                   DPWLIFILLSKLDSDTRQAWAQCAESEEKGVTINRFLKFLTSRCDTLEAFELTRSTQAR
FT                   RAATTHHADTHPRREEPKCTSCQQNHQLFKCPQFIALDIASRRDFLKSRKLCFNCLSPA
FT                   HMVGNCTSRHTCRICRRKHHTLVHGSSQPIQNGNNIDTASVDSRDRPAVSHAGSTIGHN
FT                   QPLAREGHRLGSETPAENNFTHHTLENIPAAGSQTLLPTILADVIDAWGNTTTCRLLLD
FT                   TGSTITLASESFVQRIGVRRTHARISILGLAANSAGVTRGRAHIKLRSRHSGQTVELVS
FT                   FILTSLTSSLPAQVIDTSSSTWRQICELPLADPTFCTPGAIDVIVGSDQLWSLYTGDRK
FT                   HFGNDFPIALNTVFGWILAGSYSAFDDHPTSAVTHHADLDTMVRSFMEMDSIQPNQALL
FT                   DASDPTERHFAATHKRSTDGVYVVEYPFKEKAPPIDSTLPQAINRFFSLERKFRRYPEL
FT                   KQQYEAFLDDYLQRGHMEKLTSAQVEESPDTCFYLPHHAVIKLDSLTTKCRVVFDGSGK
FT                   DSSGVSLNDRLHIGPPIQRDLFGVCLRFRQHQYVLCADVEKMFRGIKVFKPHTNFQRIV
FT                   WRTTENEPLLHFRLLTVTYGLAPSPFLAVRVLKQLADDHGHEYPAAAHALLHDAYVDDI
FT                   PTGANTFEELMILKDELIALLDKGKFKLRKWSSNSWRLLKSLPEEDRCFEPIQLLNKSA
FT                   ADSPVKVLGIQWNPGKDVLYLNLKGCDATISPTKRELLSQLSRIYDPLGLVAPVTVLLK
FT                   LIFQESWTSVLQWDDPIPESLRTRWRALVEDLPALTQCQVPRYIASPFRDVQLHGFADA
FT                   SSHAYGAVVYARVAVGCSFQVTLVAAKTRVAPIKPVSIPRLELNAALLLSRLLSIVKTS
FT                   LTIPLFSTSCWTDSEIVLHWLSAPPRRWNTYVCNRTSEILSDFPRSCWNHVRTEDNPAD
FT                   CASRGLHPSKLLEHRLWWKGPSWLATPTSEWPPSTSKFSVSSSFDVNTEERAIKPTTLH
FT                   NFPDESIHELLIHKFSTWTRLIRVSSYCHRFIHTLRSHHRNSAPFLTSEELLDAQRRLI
FT                   RHVQQKSFAREYEQLENRRQLNAKSHLIRFSPFLDDYGVMRVGGRIEQSTLNYNAKHPI
FT                   LIPKDTPLAGLLVRHFHVSYLHTGVDATFTNLRQQYWILGARNLVRKAVFQCKSCFLQR
FT                   KGTSNQIMGELPIPRVQASRCFQHTGLDYAGPIAIKESKGRTPRIGKAWFSIFVCLTTK
FT                   ALHIEVVSELTTQAFIAAFQRFIARRAKPTDLYSDNGTTFHGGKKTLDDMRRLAIQQAK
FT                   DEELAGFFANEGISWHFIPPSAPHFGGMWEAGVRSIKLHMKRILGSKALTFEELSTVLT
FT                   QIEAILNSRPLCPTGDNSLDPLTPAHFLTGSPYTALPEPCRLDMQVNRLERWNQLQAMV
FT                   QGFWKRWHMEYLTSLHERTKWHLETENLKIDTLVVLKEPNLPPSKWILGRITAVHAGID
FT                   NKVRVVTVKTAHGLYKRPIAKIAVLPLC"
XX
CC   Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 6126 BP;  1623 A; 1556 C; 1346 G; 1601 T; 0 other;
     TGTTTGGGAA CGAGACACCC TGTATACGCG AACAAGTCAC CCTTTATCTT TATTTACATT        60
     CTTATTTGTC TGCAGCTTCA TCGGAGCTTA TCAGCGGAAT CAATGTAAGC ATCGCACCGC       120
     TGTAATTGTC CGCGAGCTTG CCCAGTACTT TTCCAAACTT CTAACTCCCT TCTAACTGTA       180
     ACTTGTTTAC GTCTTATGCT AGACTAATCG TATGGCGTGA TTACAGCCAA AGCTGAAGTC       240
     AGTCACAATT TTGATCTGCG AGAAAACGTA CGCATCGGTG TCGAAATAAT TAATATTAAG       300
     TGTCTGAACT TAACCAATAA ATGAAAATTA ACAGTAACAC TGGCGGTTTT ATTTATAAAC       360
     ATAAAAATTG GTCCTTCGAG CCGGATAACC GGAAGTGCGT TTCGTTCGGG CATTTGATTT       420
     TGATTATTGG CCTTTTGGCA AACGATAATC TATAGATTCC TACATCGTGT AGAATCGTTC       480
     CCTTCTTTCG ACCACCATGC GGAGTGTGAT TCAACAACGG GGCTTCTGCA AAAGCCAAAT       540
     TACTCGTGCG CATAATAATG CCTTAAAATT TGTTGATGAC ATTCACTCAG TGCAAACAAT       600
     AGTTGTCCGC CTGGCGCAAC TACAGGAAAA TTATTTGCGG TTCGTACGGC TCTCGGAAGA       660
     GCTGTATGCA TTTCAATCGG AAGCCGATTG GGAGAACCCT GACGAGGATT TTGACGCATA       720
     TGAGGACAAA CATTATGCTA CACACGCTAT TCTCAGCAAT ACTTTGGAGG AGTTGAGACG       780
     GGATGTCACC TCAAACAGTA TTGATGCCAC AGTTCAAGCG CAGGCACACC CCAGAGAAGT       840
     CATGTCGATT TTCAGTTCGA GAGAATTAAA CTTCCGACTT TTTCTGGAAA TTATGAGGAC       900
     TGGAAACATT TTTCGGACAT GTTTATTGGA TCGATTGCTT CCAATTCGAG CCTGACGGAT       960
     TGCCAACGAT TTCATTATTT AAAATCGTAC CTTGCCGGAG ACGCGCTTGC ATTAGTTAAA      1020
     CATATTCCAG TTACTAATGA CAACTATCGG GAAGCATGGG AGCGGCTGGA ACAGCGATAT      1080
     AACAAACAAT CGCTAATTAT TCGATCGTTC TTAAACAGTT TCATGAGCCT TCCGAGTGCT      1140
     ATAAATTCAA ATATCGGCAC AGTGCGGAAA ATTGCCGATG GTGCAGACGA AGTTATTCGT      1200
     GGTCTACGAG CTCTTAATTG CGAAGAGAGG GATCCCTGGC TAATTTTCAT TCTACTTTCA      1260
     AAATTAGATA GCGATACCCG CCAAGCCTGG GCTCAGTGCG CAGAATCCGA GGAAAAAGGT      1320
     GTGACCATCA ACCGATTCTT GAAATTTCTC ACATCACGCT GCGATACGTT GGAGGCTTTT      1380
     GAATTAACTC GATCAACCCA AGCTCGACGC GCAGCTACCA CGCACCACGC AGACACGCAT      1440
     CCAAGACGGG AAGAGCCGAA GTGCACATCG TGCCAGCAGA ATCACCAACT GTTTAAGTGT      1500
     CCTCAATTCA TCGCACTCGA CATTGCATCT CGCCGAGACT TCCTCAAATC AAGAAAGCTC      1560
     TGTTTCAATT GCCTCAGCCC GGCTCATATG GTGGGCAACT GTACATCGAG GCATACTTGT      1620
     CGGATCTGCC GCCGCAAGCA TCATACTTTG GTTCATGGCT CGTCGCAGCC AATTCAAAAT      1680
     GGCAACAACA TTGACACAGC AAGTGTTGAC AGCCGCGATC GACCAGCAGT CTCACATGCG      1740
     GGATCTACAA TTGGCCACAA TCAACCGCTA GCTCGAGAAG GTCATCGCTT GGGAAGCGAG      1800
     ACTCCCGCGG AAAACAACTT TACGCATCAT ACTCTGGAGA ATATTCCGGC GGCTGGTTCT      1860
     CAGACTCTGT TGCCAACCAT CCTTGCTGAC GTCATCGACG CCTGGGGAAA CACTACAACC      1920
     TGCAGGCTGC TCCTGGACAC TGGATCTACA ATAACCTTGG CATCGGAATC ATTTGTTCAG      1980
     CGAATAGGCG TGCGTCGAAC GCACGCACGG ATTTCTATTC TCGGTCTCGC CGCCAACAGC      2040
     GCGGGCGTTA CCCGAGGACG CGCACATATC AAGCTGCGCT CTCGTCATTC GGGCCAAACT      2100
     GTCGAATTGG TCTCGTTCAT TCTCACCTCG CTGACGTCAT CACTTCCTGC CCAAGTTATT      2160
     GACACCTCAT CCTCTACGTG GAGGCAAATC TGCGAGCTTC CTTTGGCAGA CCCAACGTTC      2220
     TGCACACCTG GAGCAATCGA TGTCATTGTT GGATCGGATC AACTTTGGTC TCTATACACA      2280
     GGAGATCGGA AACACTTTGG TAACGACTTT CCTATCGCTC TCAATACTGT ATTTGGTTGG      2340
     ATTCTTGCAG GCTCTTACTC TGCATTCGAT GATCACCCTA CTTCTGCGGT TACTCATCAC      2400
     GCGGACCTAG ACACGATGGT TCGTTCATTC ATGGAGATGG ACAGCATTCA GCCTAACCAG      2460
     GCTCTCCTGG ACGCCAGCGA TCCCACAGAG CGTCATTTTG CTGCCACACA CAAGCGCTCG      2520
     ACGGACGGGG TGTACGTCGT CGAGTATCCC TTCAAGGAAA AGGCACCGCC TATTGATTCG      2580
     ACCTTGCCAC AGGCCATCAA TCGCTTCTTC TCGCTGGAAC GCAAATTTCG TCGGTATCCA      2640
     GAATTGAAGC AGCAGTACGA AGCTTTCCTG GACGACTACT TGCAACGTGG ACATATGGAA      2700
     AAACTGACCT CGGCTCAGGT TGAAGAGTCC CCAGACACCT GCTTCTATTT GCCGCACCAC      2760
     GCTGTCATCA AACTGGACAG TCTGACTACC AAATGTCGTG TAGTTTTTGA TGGATCAGGA      2820
     AAAGACAGCT CTGGAGTATC GCTCAATGAC AGACTACATA TTGGTCCACC GATTCAACGC      2880
     GATCTTTTTG GCGTTTGTCT ACGCTTCCGG CAGCACCAAT ATGTTTTATG TGCAGATGTC      2940
     GAAAAGATGT TTCGAGGCAT TAAAGTCTTT AAGCCACACA CCAATTTTCA GCGCATTGTT      3000
     TGGCGCACGA CTGAGAATGA ACCTCTGCTT CATTTTCGCC TGCTGACGGT TACCTACGGA      3060
     TTGGCACCGT CACCATTTCT GGCTGTTCGA GTTCTAAAGC AACTTGCCGA CGATCATGGC      3120
     CATGAATACC CTGCAGCAGC TCACGCTCTT CTGCACGATG CCTATGTGGA CGATATCCCG      3180
     ACAGGCGCCA ACACATTCGA GGAGCTTATG ATTCTCAAGG ACGAGCTTAT AGCCCTCTTG      3240
     GATAAGGGAA AATTCAAGCT ACGCAAATGG AGTTCTAATA GTTGGCGTCT TCTGAAATCA      3300
     TTACCAGAGG AAGATAGATG TTTTGAACCT ATCCAGCTCC TCAACAAATC AGCTGCGGAT      3360
     TCACCTGTCA AAGTTCTTGG TATCCAATGG AACCCTGGGA AGGACGTCCT GTATCTCAAC      3420
     CTAAAGGGAT GCGATGCGAC CATTTCTCCG ACGAAAAGAG AACTCTTGTC TCAGCTATCA      3480
     AGAATTTATG ATCCGCTTGG ACTGGTAGCG CCGGTCACAG TTCTACTCAA GCTAATCTTC      3540
     CAAGAAAGCT GGACAAGTGT CCTGCAGTGG GACGACCCCA TACCTGAAAG TCTACGTACG      3600
     CGCTGGAGAG CCTTAGTAGA GGATTTGCCA GCACTTACGC AATGCCAAGT ACCACGGTAT      3660
     ATTGCGTCAC CATTTCGAGA TGTTCAACTA CACGGATTCG CCGACGCATC CTCGCACGCC      3720
     TACGGTGCGG TAGTTTACGC TCGAGTTGCA GTTGGATGCA GCTTTCAAGT AACTCTGGTT      3780
     GCCGCCAAAA CACGGGTGGC CCCGATCAAG CCCGTATCAA TTCCACGTTT GGAGCTAAAC      3840
     GCTGCGTTAC TTCTATCTCG ATTGCTTTCT ATTGTCAAAA CATCACTAAC AATTCCTCTT      3900
     TTCAGCACGA GCTGCTGGAC AGATTCAGAA ATTGTGCTAC ACTGGCTTTC AGCTCCCCCT      3960
     CGACGGTGGA ACACCTACGT CTGCAACCGA ACTTCTGAGA TATTGAGCGA CTTTCCCCGT      4020
     AGCTGCTGGA ACCATGTTCG CACGGAAGAC AATCCTGCAG ATTGTGCTTC CCGAGGACTT      4080
     CATCCGTCAA AGCTTCTGGA GCATCGACTG TGGTGGAAAG GTCCGTCTTG GCTGGCCACA      4140
     CCCACCTCTG AGTGGCCACC TTCTACAAGC AAGTTCAGCG TATCTTCAAG TTTCGATGTC      4200
     AACACCGAAG AACGAGCCAT AAAGCCCACG ACTCTACATA ACTTTCCTGA TGAAAGTATA      4260
     CACGAGTTAC TCATCCACAA ATTCTCAACC TGGACGCGTC TTATAAGGGT ATCTAGCTAC      4320
     TGTCATCGCT TTATTCACAC TCTTCGATCC CATCATAGGA ATTCGGCACC ATTCCTTACG      4380
     TCTGAAGAGT TGCTGGACGC ACAGCGCCGA CTTATTCGAC ATGTGCAACA AAAATCCTTT      4440
     GCCAGAGAAT ATGAGCAGCT AGAGAATCGA CGCCAGCTTA ACGCTAAATC GCATCTTATC      4500
     CGGTTTTCTC CGTTTCTGGA TGATTATGGA GTAATGCGAG TCGGTGGGAG AATCGAGCAA      4560
     TCTACACTCA ACTATAACGC CAAGCACCCG ATTCTGATAC CTAAAGATAC ACCACTAGCT      4620
     GGACTCCTGG TTCGACATTT TCATGTCTCC TATCTGCACA CTGGAGTTGA TGCAACGTTC      4680
     ACCAATCTTC GTCAGCAGTA CTGGATTCTG GGAGCCCGCA ATCTCGTCAG AAAGGCAGTC      4740
     TTCCAATGCA AATCCTGTTT TCTTCAACGA AAGGGCACAA GCAACCAGAT CATGGGAGAG      4800
     CTACCAATTC CTCGAGTTCA AGCTAGCCGC TGCTTTCAAC ACACAGGGCT GGACTACGCT      4860
     GGACCGATCG CAATCAAGGA ATCAAAGGGA AGAACTCCAC GCATCGGAAA GGCATGGTTT      4920
     TCTATTTTCG TGTGTCTCAC TACAAAGGCA CTTCACATCG AGGTTGTTAG TGAGCTAACT      4980
     ACACAGGCTT TCATCGCAGC CTTTCAACGA TTCATTGCCC GCCGAGCGAA GCCTACTGAC      5040
     CTGTATTCGG ATAATGGAAC AACATTTCAT GGAGGCAAGA AAACTTTGGA TGACATGAGA      5100
     CGTCTGGCCA TTCAACAAGC CAAAGATGAG GAACTAGCAG GATTCTTTGC CAATGAAGGG      5160
     ATTTCTTGGC ACTTTATACC CCCGTCTGCT CCACATTTTG GAGGGATGTG GGAAGCTGGA      5220
     GTTCGCTCAA TTAAACTCCA TATGAAACGA ATACTTGGAT CAAAGGCTTT AACGTTTGAG      5280
     GAGCTCTCTA CTGTCCTGAC CCAAATTGAA GCTATCCTGA ATTCACGCCC GCTGTGCCCA      5340
     ACTGGGGATA ATTCTTTGGA TCCACTGACG CCTGCTCATT TTTTGACTGG ATCTCCGTAT      5400
     ACTGCATTGC CTGAACCCTG TCGTCTGGAT ATGCAAGTCA ATCGATTGGA GAGGTGGAAT      5460
     CAGCTGCAAG CCATGGTTCA AGGCTTTTGG AAAAGGTGGC ATATGGAATA CCTGACATCT      5520
     CTTCATGAGC GGACAAAGTG GCATCTGGAA ACCGAGAATC TGAAGATCGA CACACTGGTA      5580
     GTACTCAAGG AGCCCAATCT ACCGCCCTCT AAATGGATTC TTGGCCGCAT CACAGCAGTG      5640
     CACGCAGGAA TCGACAACAA GGTCCGAGTC GTTACAGTGA AGACTGCTCA CGGATTATAC      5700
     AAACGCCCAA TTGCCAAAAT CGCTGTACTG CCTCTCTGCT GAACAACCGT TCAGGGGGGC      5760
     CGGTATGTTT GGGAACGAGA CACCCTGTAT ACGCGAACAA GTCACCCTTT ATCTTTATTT      5820
     ACATTCTTAT TTGTCTGCAG CTTCATCGGA GCTTATCAGC GGAATCAATG TAAGCATCGC      5880
     ACCGCTGTAA TTGTCCGCGA GCTTGCCCAG TACTTTTCCA AACTTCTAAC TCCCTTCTAA      5940
     CTGTAACTTG TTTACGTCTT ATGCTAGACT AATCGTATGG CGTGATTACA GCCAAAGCTG      6000
     AAGTCAGTCA CAATTTTGAT CTGCGAGAAA ACGTACGCAT CGGTGTCGAA ATAATTAATA      6060
     TTAAGTGTCT GAACTTAACC AATAAATGAA AATTAACAGT AACACTGGCG GTTTTATTTA      6120
     TAAACA                                                                 6126
//
ID   412      standard; DNA; INV; 7567 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0000006; 412.
XX
SY   synonym: mdg2
XX
FT   source          nnnnnnnn:1..7567
FT   SO_feature      five_prime_LTR ; SO:0000425:1..514
FT   SO_feature      three_prime_LTR ; SO:0000426:7054..7567
FT   SO_feature      CDS ; SO:0000316:679..1044
FT   SO_feature      CDS ; SO:0000316:1408..1722
FT   SO_feature      CDS ; SO:0000316:1888..3243
FT   SO_feature      CDS ; SO:0000316:3864..6866
XX
CC   Berkeley Drosophila Genome Project.
XX
SQ   Sequence 7567 BP; 2982 A; 1367 C; 1323 G; 1895 T; 0 other;
     TGTAGTATGT GCCTATGCAA TATTAAGAAC AATTAAATAA AATAGCATAT TAACTTATGG        60
     CAGCACTTTG TTGCTATGTT TATGTTTATG TTTATGCACG CAGTTAGGCC AGGGCGGATG       120
     TAACATGATC ACCCACTCGA AGGCCACAAA GTATAAGTGC ATTGCCCAAT CGAAGGCAAA       180
     AAGTATAAGT GCATGGTCAG CATTCACACG CCGACCAAAT ACATATTACA TACGTACATA       240
     CATATCTCGC TCTCCCGATA AGCCTAGATA TATAAGATAT ACATAAGAAC GCCGCTCCGC       300
     TGCTGGCGTA CCCGGCAGCG CAGCTACGCG GATTAGCCTA AGTCCAAATA TATAAAAAAC       360
     TGTAAAATCG GAGAGACTCT GTAGACGTTG AGCTGACAGA ACCATTTCTG CCTACTCTAA       420
     AATCAAAAGA AGAAATTGAA TAAATATATG TCAGCCCGAC GGCTGCCTTA AACTTAAAAC       480
     GGACTTGTGT TCTTAATTGG AGTTCATCAT TACATGGCGA CCGTGACAGT CGTCCAACGC       540
     TGGACGAATT GACCAAAGCT GGTGAAAACA AAGGAACAAA GGAACACTGG ACTGGAAGAA       600
     GACTGGACTA ATTAAATGGA ACTGCAAAAA CCAAGGAAAA ATCTGAGTGA GTAGAGTTCT       660
     ATTGAGTATG GGCAAACACC GTGGCGGTTT GAAAACTAAG CTGAATAAAC GTATAGCCCA       720
     CGTAAGGTGG CTAATATACG GTCAGCAAAC GCCACCGGTT TGGTCGAAAG CTCTAAAGCT       780
     ACATGCAGAG CTAGACCACT TGTTGCAATA TCAGCAAGAA TTAAAGACCC ATAAGCTCGA       840
     GAAAACTCAC TCAGATAATA TTAAAAATAT ACCCACAATT AATGAAGTTC CAAAATACCA       900
     GGCATGTCCA GCACCAGCAC CAGCATTAAC AAAACCAAAG AAGTCCTGCC CCCCTGGCTG       960
     CGAAGGAATC TGGAGTCCCC ACTGCCTGGG GACTTGTGAG CGACCATCGA CGTCTTCAGC      1020
     GGCGAAGAAA TAGACAGCAG CGAGGGAGTG TCAGCGTGCC ACCCCCGGCG ACGCCCAGCT      1080
     GACACCCAAC AAATAGACAG CAGCGAGGGA GTGTCAGCGT GCCACCCCCG GCGACGCCCA      1140
     GCTGACACCT GATGAGCATC ATCAACAGCA GAATATAATA ATAAATATAT ATAAATATAA      1200
     AGTAAATATA AAATATATAT AGATAAGAAA AATTGTAAGA AATATTGTAA AACGGAGCAT      1260
     ATACTATTAT GCCCTGTTAA CCCAATATGG CCCGTGAAGC CATAGCTAGA ATCAGGCAGG      1320
     CAACAATGTA AAATACAATT TTTTTTTACT CTTGCGAACA TTGAAAGATT TTATAAATAG      1380
     ATAATTCCAA ACATAAATGT CTATAGAGAC AAATGAAATA AGTAAAACTG AAAATAAAAG      1440
     TATATACAAA GGAAATTTTC TATTCTATTC TCCAAAATAT AAAATTAGTA TACCCAAAAT      1500
     GGGTCTAATA GACACTAAAA CTGTGGACTC TACAGCCAAT GTAATAAATA AAGTAGAAGT      1560
     CCAAAATGCA GACTTGTTCT GGATAACCAT AATACTAATT GTAATTGCAT TAATTATGGT      1620
     ATCCAATGCA TTAATAAAAA TATACAAACT GCATAACAAG TGTCTTAAGA AACGATACCG      1680
     TAGCACTGCT AACGGTATAG ATAATATTTA AGGAAGATCT TTAATAAAGT CAATTATGAA      1740
     TGAAAATATG AGAAAAATTA TATGAAAAAA AAAAATAATA AATAAAAAAA AAATATAAAA      1800
     CGTAATATTG AATTTATCTA CATTAAAAAA AAATATATAC AAATGAATAA ATTTGAAGTT      1860
     ATGAGTATAC CACAGCATGG ACTGGGAAAA GCTTGTTGAT CAGATAAAAG ATCAAAATGA      1920
     AAATTTCAGA AAATCCTATA AGTGCTTAAC GCAAAACAGA TCAACACAAG CTGTAACAAT      1980
     CAATAGGAAT GCCCAAGTCT TGGTAAATAG TTATAATGAA ATCAGAGAGT TGATCCAACA      2040
     AAATAGAAAG AATTTGGAAC GCAAACAGTG TGCTAAGGCT TTGAACCTAC TGGTGACATT      2100
     AAGAGAAAAA TTAATATTTA TAAAAAATAA ATTCAGTCTC CAGATAGAAA TTCCAACCAT      2160
     AGTAAACACC CCACTAAGAA TAAATTTGAA TGAAGACAGC ACTAACTCTG ACGAGGAAGA      2220
     TAGGACTATA GTCAAGGAAG ACATTAAAGA GGAAGATCTT CACGATCTAA CTATACCAGC      2280
     AAAATTAATG CTGAAGAACG ACGATAAAAC AAATAACGCA GCCGACTCCG AAAATAACTT      2340
     AACCATGGCA GAAGAAGCAG CTGCCATTAG GTCTTACATT AGGGAAGTCG CCTGCACAGT      2400
     GCCAGAATTT GATGGGCAAA AGATCCATTT ACAAAGATTC ATTAAGGCAA TCAAATTGGT      2460
     AGACCTAGCT AAGGGACCAT TTGAAGACAT TGCAGTTGAG GTCATTAAGT CAAAAATAGT      2520
     TGGCACAATT TTGAACTCAG TTGACAATGA AACGACAATT CCAGCAATTA TAAACAAATT      2580
     GCAGAAAGTA GTTGTCGGTG AGACATCCAG TAATGTCAAA GCAAAGCTAG CAACAGTTCA      2640
     GCAGAGAGGT AAAACTGCAA CGCAATTTAC CGCTGAAGTT GATAGCCTGA GAAAACTTTT      2700
     AGAAGCTTCC TATATCGATG AGGGTATACC TCTAGAACAT GCCACTGGTC TAAGCACCAA      2760
     AGAGGCAATT GAAACCATGA TACATCGTGC TGAGCACGAA AGTATCAAAA CAGTACTGGA      2820
     AGCAGGGACT TGCACCACTA TGGATGCAGC GATAAGCGCA TACATAAGAA CGAGTACAAG      2880
     AGTTACCGGT GACATCAATA AAGTGATGTA CTTTAGAGGT AACAGACCCA ATAGAGGATA      2940
     CGGAAATGCC AATAGAGGTA GTAACCGCGG TAGAGGCTTT AATAACAATA GTATTAGAGG      3000
     CAACTACCAT AACGGTTACC AAAATAACGG TTACCAAAAT AACGGTTACC AGAATAACGG      3060
     TTATCAAAAC CGCTATAATG GAAATAATAA CCGTTATAAT GGCTATAACA GAGGCCGTTA      3120
     TAATGGAAAC AGAGGCCGTA ACAACAGTCA GAACAACTAC AACAGAAACA ATGCCAATGT      3180
     ACGAGTAATC CAAGAACAGG GAAACTCGCA ACAGCCTTTA GGTACTCAGT AGAAGAAGAT      3240
     CGTAGAGTAT ACACCATCAA TTATAATCTC AACATATTTT CTACATTCAT TCATGCCAAA      3300
     ACAGGCGTAA AACTAGTTTT TCTACTTGAT ACAGGTGCAG ATATCTCTAT TCTCAAAGAG      3360
     AACTCTGACA AATTTTCTAA TATTCAAATA ACCAATAAAA TAAACATTCA AGGCATAGGC      3420
     CAACAGAAAA TTCAGTCTCG AGGACAGACT TTTATTGAGA TACAGACAGG TAAATACGTT      3480
     ATCCCACACG ATTTTCATTT AGTAGATAAA AACTTTCCAA TACCGTGTGA TGGAATAATC      3540
     GGAATAGATT TCATAAAAAA ATATAATTGC CAAATCGATT TAAACCAAGA AGAAGATTGG      3600
     TTTATAATTA GACCAAACAA TTTGAAATTT CCAATATATA TTCCCATAGC ATACAGCTCT      3660
     GGTATTAACA CAACGTTATT ACCAGCAAGA TCCCAAGTTG TCCGAAGATT AATAGTATCA      3720
     TCAAAAGATG ATAACATTTT AATTCCAAAC CAGGAAATTC AAACTGGTAT TTATGTTGCA      3780
     AATACAATCG CAACATCAAG TAATACATTT GTCCGAATTT TAAATACAAC CGATTCCGAC      3840
     CAATTAGTCA ATATGGACAC TCTAAAATAT GAGCCACTTT CGAACTACAA TGTAGTTCAG      3900
     GCAAATAGTG AACACAGAAA TAAAACTGTC TTATCTCAAT TAAAGAAAAA TTTCCCCGAA      3960
     TTGTTTAAAT CACAATTAGA AAATATATGC AGCGAATATA TAGATATATT TGCATTAGAA      4020
     TCAGAACCTA TAACAGTTAA TAATTTGTAT AAACAACAGT TGAGATTAAA AGATGATGAG      4080
     CCAGTATACA CGAAAAATTA TAGAAGTCCT CATAGTCAAG TGGAAGAAAT ACAAGCCCAA      4140
     GTTCAGAAAT TAATAAAAGA TAAAATAGTT GAACCATCAG TTTCACAGTA CAATAGCCCT      4200
     TTGCTATTAG TACCCAAAAA GTCAAGCCCG AATTCTGATA AAAAGAAATG GAGATTAGTA      4260
     ATAGACTATC GCCAAATTAA TAAGAAACTT TTAGCTGACA AATTTCCACT ACCGAGAATA      4320
     GATGATATTT TGGACCAACT TGGTCGAGCA AAATATTTCT CCTGCCTTGA TTTAATGTCA      4380
     GGTTTTCATC AAATCGAACT GGATGAAGGC TCGAGAGATA TAACATCTTT CTCAACCAGC      4440
     AATGGCTCAT ATCGTTTCAC GCGATTGCCA TTTGGCTTAA AAATAGCGCC TAATTCATTC      4500
     CAAAGAATGA TGACTATAGC ATTCTCCGGA ATAGAACCGT CTCAAGCATT CCTTTATATG      4560
     GATGACTTAA TAGTCATAGG TTGTTCCGAA AAACATATGC TTAAAAACCT CACTGAAGTT      4620
     TTTGGTAAAT GCAGGGAATA CAACCTAAAG TTACATCCTG AAAAATGTTC ATTTTTCATG      4680
     CATGAAGTCA CATTTTTGGG ACACAAATGC ACAGACAAAG GAATTTTGCC GGATGACAAA      4740
     AAATATGATG TCATTCAGAA CTACCCAGTT CCACATGATG CGGACAGCGC TAGACGTTTT      4800
     GTAGCATTTT GCAATTACTA CAGACGTTTT ATCAAAAATT TCGCCGACTA TTCGCGGCAC      4860
     ATAACAAGAT TATGTAAAAA GAATGTTCCA TTCGAGTGGA CAGATGAATG TCAAAAAGCA      4920
     TTCATACATT TAAAATCTCA GCTAATTAAC CCAACACTCT TGCAGTACCC AGACTTCAGC      4980
     AAAGAATTTT GCATAACAAC AGATGCAAGC AAGCAAGCGT GTGGCGCAGT TTTAACTCAA      5040
     AACCATAATG GCCACCAACT CCCAGTTGCT TATGCATCCA GAGCTTTTAC GAAAGGTGAA      5100
     AGCAATAAGA GTACAACAGA ACAAGAGTTA GCAGCAATTC ATTGGGCAAT AATACATTTC      5160
     AGACCATACA TTTACGGAAA ACATTTCACT GTGAAAACAG ACCATAGACC ATTGACATAT      5220
     TTATTCTCGA TGGTGAACCC CAGCTCTAAA TTAACTAGAA TAAGGCTTGA ACTAGAGGAA      5280
     TATAATTTTA CAGTAGAGTA TCTAAAGGGC AAGGACAATC ATGTAGCAGA TGCGTTATCA      5340
     AGAATAACCA TCAAAGAGCT AAAAGATATA ACTGGAAATA TATTAAAAGT CACTACAAGA      5400
     TTTCAAAGTA GACAAAAATC CTGCGCAGGA AAAGAACAAT TGGATTTGCA AAAGCAAACC      5460
     AAAGAAATAG CTTCAGAGCC CAACGTATAC GAAGTCATAA CAAATGACGA GGTACGAAAA      5520
     GTAGTGACAT TGCAATTGAA TGACTCGATA TGTTTATTTA AACATGGAAA GAAAATTATT      5580
     GCAAGATATG ATGTTGGTGA TCTTTATACT AATGGAATTC TTGATTTAGA TCAATTTCTC      5640
     CAAAGGCTTG AATTGCAGGC CGGTATATAT GATATCAGCC AAATCAAAAT GGCACCGTGG      5700
     AAAAAAATCT TTGAACACGT TTCAATAGAT AAATTTAAAA ATATGGGCAA TAAAATATTA      5760
     AAGAATTTAA AAGTAGCGCT ACTTAACCCG GTGACCCAAA TAAATAATGA AAAAGAAAAA      5820
     GAAGCTATAT TGTCTACATT ACATGATGAT CCAATACAAG GAGGGCATAC AGGCATTACA      5880
     AAAACCTTGG CCAAGGTCAA AAGACATTAT TACTGGAAAA ATATGAGTAA ATACATAAAA      5940
     GAGTACGTAA GAAAATGTCA AAAATGCCAA AAAGCAAAAA CAACAAAGCA CACAAAGACT      6000
     CCAATGACGA TAACTGAAAC ACCAGAACAT GCTTTCGATA GAGTTGTTGT GGACACAATT      6060
     GGTCCACTAC CCAAGTCAGA AAATGGTAAC GAGTACGCAG TCACTCTCAT ATGTGATTTA      6120
     ACCAAGTACT TAGTTGCCAT ACCAATAGCA AATAAAAGCG CAAAAACAGT CGCAAAAGCT      6180
     ATATTTGAAT CTTTTATTCT AAAGTACGGT CCAATGAAGA CGTTCATAAC GGACATGGGA      6240
     ACAGAGTATA AGAATTCAAT AATTACTGAC CTGTGTAAAT ATTTGAAAAT AAAAAATATA      6300
     ACATCAACAG CTCATCACCA CCAGACAGTT GGAGTAGTAG AAAGAAGTCA TAGAACCTTA      6360
     AACGAGTATA TACGATCCTA CATATCGACG GACAAAACCG ATTGGGACGT ATGGCTTCAA      6420
     TATTTCGTAT ACTGCTTCAA CACGACCCAA TCTATGGTAC ATAATTATTG TCCATATGAA      6480
     TTAGTTTTCG GTAGAACAAG TAATTTACCA AAACATTTTA ATAAACTACA TAGCATAGAA      6540
     CCAATATATA ACATAGATGA TTACGCTAAG GAGAGTAAAT ATAGGTTAGA GGTAGCATAT      6600
     GCTCGAGCAA GAAAACTTCT CGAAGCACAC AAAGAAAAAA ATAAAGAAAA TTATGACTTA      6660
     AAAATAAAAG ACATAGAATT AGAAGTAGGA GATAAAGTTT TACTAAGAAA TGAGGTAGGT      6720
     CATAAATTAG ACTTTAAATA TACGGGGCCC TATAAGATAG AAAGCATAGG AGATAATAAC      6780
     AATATTACGC TACTTACTAA TAAAAACAAA AAACAAATAG TTCATAAAGA TAGATTAAAG      6840
     AAATTTCATT CATGATTGAA TTTAAACTTA TATTTTCCTT AATCATTTAC ACAAATTTTC      6900
     CATACACTAC GTATATTTTT ATCTTTGCAT TATAAAATCA ACTATTGTTG TTCAAACAAA      6960
     AACACAAACA AAATAAAAAT AAAAATAAAA TAATTTGCAT TTAATAATCA AAATAACTTC      7020
     ACTAGGTTAC GTTATTTTTC AAAAGGAGGG AGATGTAGTA TGTGCCTATG CAATATTAAG      7080
     AACAATTAAA TAAAATAGCA TATTAACTTA TGGCAGCACT TTGTTGCTAT GTTTATGTTT      7140
     ATGTTTATGC ACGCAGTTAG GCCAGGGCGG ATGTAACATG ATCACCCACT CGAAGGCCAC      7200
     AAAGTATAAG TGCATTGCCC AATCGAAGGC AAAAAGTATA AGTGCATGGT CAGCATTCAC      7260
     ACGCCGACCA AATACATATT ACATACGTAC ATACATATCT CGCTCTCCCG ATAAGCCTAG      7320
     ATATATAAGA TATACATAAG AACGCCGCTC CGCTGCTGGC GTACCCGGCA GCGCAGCTAC      7380
     GCGGATTAGC CTAAGTCCAA ATATATAAAA AACTGTAAAA TCGGAGAGAC TCTGTAGACG      7440
     TTGAGCTGAC AGAACCATTT CTGCCTACTC TAAAATCAAA AGAAGAAATT GAATAAATAT      7500
     ATGTCAGCCC GACGGCTGCC TTAAACTTAA AACGGACTTG TGTTCTTAAT TGGAGTTCAT      7560
     CATTACA                                                                7567
//
ID   DMAURA     standard; DNA; INV; 4263 BP.
XX
AC   AB022762;
XX
DR   FLYBASE; FBgn0010103; aurora-element.
XX
FT   source          AB022762:1..4263
FT   SO_feature      five_prime_LTR ; SO:0000425:<1..112
FT   SO_feature      three_prime_LTR ; SO:0000426:4046..>4263
FT   SO_feature      primer_binding_site ; SO:0005850:119..134
FT   SO_feature      primer_binding_site ; SO:0005850:4035..4044
XX
CC   Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1).
CC   Takis Benos and Michael Ashburner, 27-March-1999.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 4263 BP; 1021 A; 1018 C; 1375 G; 849 T; 0 other;
     GAATTCTTCA AGAATAAAAC GTGTTCTACT ACCACGGATT AGTCTGCCCT TTCTTTCGGG        60
     AACCAATGTG TGGGGTAGCC GTTTAAGGCA ACTCCCTGGA CGCACGACGA CAACCTTTTA       120
     TTCGCAGTCC TAGGGCGACT GCAGGGGCAA CTTGCGCTGG AATGACGGTT TAGACGGCCA       180
     GCTAGAGAGT TGCCGGAGCT GGAGTGACGG TTTAGACGGC CAGCGAGGAG GATTTGTGTG       240
     AGCGCAGCCA GCGCTACGTA CCGGCAGAGG AGTCGCAGTC AGCGACATAG AGGGACGCAG       300
     CCAGCGTCGA ACGCCGGTAC GAAAGGGTCG CAGCCAGCGA CAAGGAGACG CAAGAAGCGT       360
     CATTTGTGGA GACCGCAGCC AAGCATCCGT GGCCGCAGCC AGCGGCACGA GGCGTCAGAG       420
     ACGCCATTTC GGACGCGCAG AGGCGCCGCC ATTTTTGGAG CTGGGAAAGA TGCAGCATTC       480
     CCCCAGGAAG AGTGCCCGGC TGAACGGAGG GGAAGTCACC CCTATAACAA CAGTGAGTCA       540
     GCAGCCAGCC AGTAGTGGAG CAGGAACTCG GACGCGGGTG AACATCACGG CGGCGTCGAT       600
     TCCTTGCCCG GCCACTACGG TGACTACAGT AGCTTCCCAA CCTAGAAGTA CTGCTGTCAC       660
     AGCTGCGAGT TCAGTACCGG AGGTGAACCA GCCCCTCGTG TTGGAACTCA TGGAGAGGAT       720
     CGCAGCGTTG GAGAGGGAGC TGGAGAAGAC TAGATCCCTA GAAAGTGTGA GCACCGCCAA       780
     TTGCGCGCCA ATCGCAGTTG GCCCAAGCGC AGTTGGCGCC AACAGTGGAG CGTCGGGGCG       840
     GCCGCCATTT TGGAGCGGCC AGCTAATACC CACATCTAAC GGAGAGGCCT TACATAACGG       900
     GGACTGGGCC AGGCATGCTG CAACGATTGC GCCCTTTCCC ACTGTAGTCC ACTTCAGCGC       960
     GTGGCTACAG GAGTACGCAA ACGTGGTGTG CACGGTTTTG GACGTCGAGG GAAAGGAGCC      1020
     GAGGCGTCGA CTTCTACATG CAAGCGTCGA CCATAATGAA TGCGATCAAC AGGATGATCG      1080
     GCATGGAGGT TGTCCCATCT GTGGAGGACA GCATGAAATA TTGAACTGCA GAAAATTTAT      1140
     TGGAGCTTCG CCACAGGAAA GGTGGAGCAA TGTGAAGAGG CATCGGCTCT GCTTCAATTG      1200
     CCTGCGAAGC GGGCACACGG CTAGATCCTG CTATACGCAA GGTGAGTGCC AGGTTAATGG      1260
     ATGCCGAAGG GAGCATCACC GTCTGCTACA TGGTGCGGAC GGAGGAACGA AGGCCGCTGC      1320
     AGCGAGGTGG CTTCAGACGC CACGAAGGGA ACCAGCAGCC AGCAGTTTCC AGACGCAGCC      1380
     TAAAGGGGAG GCCTTCGCTA CGAGATGGTC ACAGGGACCA GGAGAGGAAC CGGCAGCCAG      1440
     CCGTTCCAAG CAACAGTCTG GAGAGAGGAG CTCCACGTGA AGCGGGAGCG CCCATGCAGA      1500
     GGAATTTGAG CTGCGTTGAC GCCGAAGGAG GCCGTCTACT GTTCCGTATA CTGCCGGTTA      1560
     CGCTGTACGG AGCGGGGCGA AAGGTGGATA CATATGCGCT CCTAGATGAG GGATCCTCCG      1620
     TCACGATGAT CGATGACGAA CTACGAAGGG ATCTTGGAGT GCAAGGAGAG CGTCGGCAGC      1680
     TAAATATCCA ATGGTTTGGT GGTAAGGCAA CCAGAGAGCC TACCAACGTG GTGAGTCCGA      1740
     AGATAAGTGG AGTTGGAAAG CCCACTCGCC ATGTATTGAG AAACGTTTAT GCCGTTTCGA      1800
     GCTTGAGTTT GCCGATGCAG ACATTGAGCC GACGAGATGT CCAGGGCGTG CACAGGGATG      1860
     CGCGTCTGCC CGATGAAGCC TTACAGCAAC GTGGTGCCGA AGCTGCTCAT CGGTCTGGAT      1920
     CACGGACATC TGGGGTTGCC ACTTAGGACG AGGCGGTTCG CTCGAGAGGG ACCGTATGCG      1980
     GCCGCAACCG AGCTGGGCTG GGTTGTGTTT GGGCCTGTAA GTGGGCAACC GACCACGCCG      2040
     TCACCGAGGT CCTGCCTACT TGCCGTGTCA GTGGATGACG CGATGGAGAA GATGGTGGAG      2100
     GACTATTTCG ACATGGAGAA CTTTGGAGTG AAGACCGCGC CGCCGGTCGC AGCCAGCGAC      2160
     GATGTCCGGG CCCAAAGGAT ACTCGAAGAC ACCACGGTGA AAGTGGGGCG TCGCTACCAG      2220
     ACGGGATTAC TCTGGAAGGA CGACCACGTT GTGCTGCCAC CGAGATATGA GGACGACGAC      2280
     GTGCAAGTGA GCTTCGTGAG TGCGAGGACG AAGTGTGCCC CAATGAGAAC GATGACGATC      2340
     CCACGGCTGG AGCTGCAAGC AGCAGTTCTT GGAACCAGGC TGATGAACAC TGTCAAGGAG      2400
     GAGCACAGTG TGGTCATCAC GGACCTGGTG TTATGGACGG ACTCTAAGAC GGTGCTGAGA      2460
     TGGATCGGCA GCACCCACCG CCGCTGACAA TGCGGCTGAT GATGCGACGC GGTCGCAGAA      2520
     AAGGAGTCGA CCTTAGCCAG GAATCAAGGT GGCTAAGAGG ACCTGCATTT TTGATGCAGC      2580
     CAGCAGCCAG CTGGCCGGGG TCTGAGGAAG GAACTGAGCG TGTTCCAGAT GTCCCTGATG      2640
     AAGAAGAGAT GCCCAGTGAG TTTGCATTAG TTGCGGTAGA CGATTTTGTC ATTCCGTTTC      2700
     AGAGATTCTC GAGCTTCAGT CGCCTGGTGA GGACCACAGC CTGGGTCCTA CGGTTTGCGC      2760
     GCTGGTGCCG CAAACAGCGA AACGATCTCG AGGAATACGG CCTTACCGCA GCCAGAATGT      2820
     AAGGCCGCCG GAACCGCACT GTGCATCCCG TACAGTGCGA GGAGGGCCGT ATTACTGTCA      2880
     CACAGGCACA GTCTGACGGA GCTGATTGTG AGAGACTTCC ACGCCAGGAT GAAGCATCAA      2940
     AATGTGGATG CTACGATCGC GGAGATCCGG ACAATGTTCT GGGTCACAAA GATGAGGCGT      3000
     GTGATGCGGA GAGTCATCTC ATCGTGCAAC GAGTGCAAGT TGCAGCGAGC GCGGCCGATG      3060
     CCGCCGATAA TGGGACCCCA TCCGGAAGAC AAACTGGATG CGGGTGGATG GCCATTCAAA      3120
     TACACAGGAC TGGACTACTT TGGGCCACTG CTGGTGACTG TGTCCCGTCA CAAGGAGAAG      3180
     CTTGGGTCGC CTTGTTTACG TGTTTGACGA CAAGGGCGAT TCACCTGGAG CTGGCGCATG      3240
     ACCTGTCGAC GGATTCCTGC ATAATTGCGA TCAGGAACTT CGTCTGCCGT AGAGGGCCAG      3300
     TATATAGACT GCGCAGCGAT AACGGCAAGA ACTTCGTGGG AGCTGACAGG GAAGCCAGGC      3360
     GCTTTGGCGA CGTATTCGAG ATGGAGAAGC TTCAGAGTGA GTTGACAAGC AGAAGCATTG      3420
     AATGGGTGTT TAATTGTCCA GCGAACCCGT CTGAGGGCGG AGTTTGGGAG CGCATGGTGC      3480
     AGTGCGTCAA GAGAGTACTG CGTCATACCC AGAAGGAAGT TGCGCCGAGG GACCATGTAT      3540
     TGGAGAGTTT CCTGATTGAG GCGGAGAATA TTGTAAACTC GCGTCCGCTC ACCCACTTGC      3600
     CTGTGGATGT GGACCAGGAG GCGCCGTTGA CGCCAAACGA TCTTCTCAAG GGAGTAGCCA      3660
     ATCTGCCGGA TACGCCTGGA TTGGATGCGG AGCTGCCCAA GGAAGGTACT ACGAGGAAGC      3720
     AGTGGAGAAT TTCTCGCCTG CTACGAGACC GTTTCTGGAG GAAGTGGGTC ATGGAGTACC      3780
     TGCCTACGCT TGTGCGCCGC GAGAAGTGGT GCCGACGAAC GGAGCCCATC CACCAGGGTG      3840
     ATGTGGTCTT CGTCTGCGAT CCTGCCTTGG CCCGACGAGA GTGCCGCAAG GGTATCGTGG      3900
     AGGAGATCTA CAGCGGAGCT GATGGAGTTG TCAGACGCGC TAAGGTGCGC GTGAACGAAA      3960
     ACGGCCTATC TAGGACAATG ATGCGACCCG TCTCTAAACT TGCAGTTATG GATTTGAGTG      4020
     AAGCGGTTCT TCACGGGGTC GGGGATGTCG CGGATCGAAT ATTGTTATCG ATAGGCTCTA      4080
     GTTAGTATTT TTGAGAAGTC CGAATGTGGA AGGATTTGTA AGCCCATATG TGTCTGGGCA      4140
     CGTTGTTTTT GGCCATTGTA AATTACCGGG AAAATTTAGC TTTTCATTGT CGTGTAAGAG      4200
     TTGGAGGACA CACTGCGGTG AGCTAATAAG TTAAGTTAGT TGCAATTGTG AAACATTGAA      4260
     TTC                                                                    4263
//
ID   DMBARI1    standard; DNA; INV; 1728 BP.
XX
AC   X67681; S55767;
XX
DR   FLYBASE; FBgn0005773; Bari1.
XX
FT   source          X67681:1..1728
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..28
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1701..1728
FT   SO_feature      CDS ; SO:0000316:379..1398
FT                   /db_xref="FLYBASE:FBgn0043784; Bari1\ORF"
FT                   /db_xref="SPTREMBL:Q24258"
FT                   /protein_id="CAA47913.1"
FT                   /translation="MPKTKELTVEARAGIVARFKAGTPAAKIAEIYQISRRTVYYLIKK
FT                   FDTVGTLKNKKRSGRKPVLDQRQCRQILGVVAKNPSASPVKIALESKNTIGKQVSSSTI
FT                   RRRLKEADFKTYVVRKTIEITPTNKTKRLRFALEYVKKPLDFWFNILWTDESAFQYQGS
FT                   YSKHFMHLKNNQKHLAAQPTNRFGGGTVMFWGCLSYYGFGDLVPIEGTLNQNGYLLILN
FT                   NHAFTSGNRLFPTTEWILQQDNAPCHKGRIPTKFLNDLNLAVLPWPPQSPDLNIIENVW
FT                   AFIKNQRTIDKNRKREGAIIEIAEIWSKLTLEFAQTLVRSIPKRLQAVIDAKGGVTKY"
XX
CC   Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 1728 BP;  596 A; 291 C; 332 G; 509 T; 0 other;
     ACAGTCATGG TCAAAATTAT TTTCACAAAG TGCATTTTTG TGCATGGGTC ACAAACAGTT        60
     GCTTGTGCAG CAAGTGGGGG GAGGTGAAAT GCAAAAAAAC TTTTGCTTTT GCAAATTCAA       120
     ACCTATGCAG AGTCAGATGA AAGAAGAATT GAAAAAATAA CTGTTCCTAT GCGCAAGGAA       180
     GAGGCAAATG AAGAGATCTT TATCAGTTGT CAGAAGTATT TGCACACGGT TTCGTCGCAT       240
     CACAATTATT TTCACAACGC AATTTCTTCT TCAGTGATTG GTTTAGAGTG ACAAGTGCCG       300
     GTTTGTTTGC TTAAATACAT TTAAATTATT GAATAAAAAT TAGATTTAAT CATTTTCCTA       360
     TTACAGTTAT TAAATAAAAT GCCCAAAACA AAAGAGTTAA CAGTTGAGGC CCGGGCTGGT       420
     ATTGTTGCTA GGTTTAAAGC CGGTACACCT GCGGCCAAAA TAGCTGAAAT ATATCAAATT       480
     TCGCGTAGAA CTGTCTACTA CTTAATAAAA AAGTTTGATA CAGTTGGCAC ATTAAAAAAT       540
     AAAAAAAGAT CAGGCCGAAA ACCTGTGCTG GACCAAAGGC AATGCAGGCA AATACTTGGA       600
     GTTGTGGCGA AGAATCCTAG TGCCAGTCCG GTAAAAATTG CCTTAGAATC AAAAAATACA       660
     ATTGGCAAAC AAGTTAGTAG TTCTACAATT CGTCGCAGGC TAAAAGAAGC TGATTTTAAG       720
     ACATACGTTG TTCGCAAAAC GATTGAGATC ACACCAACCA ACAAAACAAA ACGTCTTCGA       780
     TTTGCGTTGG AATATGTTAA GAAGCCTCTT GACTTTTGGT TTAATATTTT ATGGACTGAT       840
     GAGTCTGCAT TTCAGTACCA GGGGTCATAC AGCAAGCATT TTATGCATTT GAAAAATAAT       900
     CAAAAGCATT TGGCAGCCCA GCCAACCAAT AGATTTGGTG GGGGCACAGT CATGTTTTGG       960
     GGATGTCTTT CCTATTATGG ATTCGGAGAC TTGGTACCGA TAGAAGGAAC TTTAAATCAG      1020
     AACGGATACC TTCTTATCTT AAACAACCAT GCTTTTACGT CTGGAAATAG ACTTTTTCCA      1080
     ACTACTGAAT GGATTCTTCA GCAGGACAAT GCTCCATGCC ATAAGGGTAG GATACCAACA      1140
     AAATTTTTAA ACGACCTTAA TCTGGCGGTT CTTCCGTGGC CCCCCCAAAG CCCAGACCTT      1200
     AATATCATTG AAAACGTTTG GGCTTTTATT AAAAACCAAC GAACTATTGA TAAAAATAGA      1260
     AAACGAGAGG GAGCCATCAT TGAAATAGCG GAGATTTGGT CCAAATTGAC ATTAGAATTT      1320
     GCACAAACTT TGGTAAGGTC AATACCAAAA AGACTTCAAG CAGTTATTGA TGCCAAAGGT      1380
     GGTGTTACAA AATATTAGTA TTGTATTTAT ATAAAATAAA GAAATTCTTA TGTTGAAATT      1440
     AGATGTTAAG CTGAAATTTA CTAAATTAAG TTGAGTGAAA ATACTTTTGA AGCGCAATAA      1500
     ACATGTGAAA ATACTATTGA CAACTTGCAT GCATATTTTC TTTTGCTTTA AGCTTTGTAC      1560
     TATGAACCGT TATCTTTCGT ATTTCTTTTC GACTACCTTC TGCATAGATC AAGCTAAGCG      1620
     ATAAGAACTA TTTCAGGCAA ATCGGACAAC AACAAGAAGA AATATAACAA AAAGAAGTTG      1680
     AAGTTTGCAA ATATTGTGCG TTGTGAAAAT ACTTTTGACC ACCTCTGT                   1728
//
ID   BS     standard; DNA; INV; 5142 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0000224; BS.
XX
FT   source          nnnnnnnn:1..5142
FT   SO_feature      CDS ; SO:0000316:341..2248
FT   SO_feature      CDS ; SO:0000316:2245..2965
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
CC   This replaces that from complement(X77571:651..5776) in versions
CC   previous to 4.8.
XX
SQ   Sequence 5142 BP; 1652 A; 1222 C; 1075 G; 1193 T; 0 other;
     AAATCTGCAT TCATAGAGAT CGGTTGTGTC GCGCGTATGC AAAAGTGATC TATTTTGCTT        60
     TATTGTTGCA ATTTCTTGGG TGCTTAAAAT AGCACTCACC AGTACATTCG GGCGCTGCTT       120
     CGTGCGGTGT CGGCATCTGG CCAACAACAA AAAGCGTTAA TCGAAGTGCG GTGTAGCTAC       180
     GATACCTGCC CTTCGGGCAA CTTATTCCCC TCACCCCGCG CAAAGCCGCT GAAGGGGGCA       240
     ATAAAATCTA TGCTTATCAG CAAAACTGAT CCGTATTTGA TCTGTTTTGT GGTCAGTTAA       300
     GCAAGCTATT TTGTAAATAT TAAGAATTAT TATTAAGACA ATGGATGAGA ACAATTCTGA       360
     TGACACCCAG CTTTTAAATA AGCAGAGTAA CCATAGAACA ATGTTCTCAA TAGCTGGCAA       420
     ATTACCTCAC GAGATTAGAA ACGAGTGCCG ATCAGCAATT CAACGCTTTA CAAGCAGCGT       480
     AACTCAAAGC AGTAGCGTCA CCACAACAAC GGTGACATTT ACTAGTGCCA ATAACAGCAC       540
     CATATATACA ATGGCAAATG CCGCAATAAG CAGCCCGTGC CTTGGAACAA GATCCACTCA       600
     CCAGGAAAGT TCCACATTGA TAAACTCCGG AATCGTAGAA GATAATCTCA GCGATGCTGC       660
     CAGAAGGTTA TTAAATGACC AAAATCAGAG AGCGGGTAAA AGGAAAAATG GAAAGCCCTT       720
     GTCCCCCATC TCCAACCCGA AAAGAGGGAG TAGCAGCCAA GTTTTACACT CGCCCCCTAC       780
     GACTAGCCTG AAGATAAGCT CTAATAATAG GTTTGCCATT CTGGACACGG ATATTTCTAC       840
     TAACGAAGAA AGCGTGGAAG GCATGATGAT AGAGGGTGCT GATATTGACA GTGCCCATAT       900
     GGATGATTCT CAACTCGATG GTTCCAATAC TGGTCGAAAC TTGCAGGAAA CACACAATAC       960
     AGCCAATCAA CTTAATGATC ACAAAAAACC ACCACAAATT GTTGTAAATA TCAGAAACTT      1020
     GAATGATCTG TTTGAGCTTA TAAAAGAAAA GACAAGCTTA GATAACGTTG TCGTTAAAGC      1080
     TAATCAAGGG GAAACGGTCA GAATATTTCC AAAAGACAGC GACACTTACA GGAAAATAGT      1140
     GAGCCATATG GATGACATTG GTATTCAGTT TCACACTTAC CAAATGCTGA CAGATAAGCC      1200
     ACACAGAATT GTAGTAAGGG ACTTACATCA CAGTACATCA AACAAAGACA TAACCGCCGA      1260
     TCTGAAATGT TTAGGCTACG AAGTGCTCCA CATTCACAAC CCTAGTTCTA GGACTAATAA      1320
     GGACGAAAAA CTAAACATCT TTTTCATTAA TATAAAGCCC TGTGCAAAAA TTAATGAAAT      1380
     TTACCATGTC AAGACCCTTT GCCGACAGAA AATACGGATT GAAAGGATGA GAAAGTCTTC      1440
     TGAAATTGCG CAATGTCGTC GTTGTCAGGA GTACGGCCAT ACAGCTAAAT ACTGCCGCAG      1500
     ACACCCAAAT TGTGCCAGAT GTGGCGAAAA TCACCAAACC ATGCAATGCA CCCGACCGAT      1560
     AGACGCACTG CCCACATGTT ACCATTGCTC TGAAAATCAT ACGGCTAGCT TCAAAGGTTG      1620
     CCTAAAGTAT CAGGAGCTTC TTCGCAGATC TATGGGGCCT GCAAGAAATG GAAACAGGTT      1680
     AAATAAGAAC ACCCATCATC ACTCTCCTAG AGACCGGCAA GAGCTTCCTG CCTTGCAGCC      1740
     CAATTACCGC AAGAACAACA CCCAATCAAC AGTACAGCAG TTATCGACAC AACCACAGCT      1800
     TAATTTTGCC CAAAGCCAAC CATCTATAGG CACTGGTGGA AACAGAGCAG TATCCTATGC      1860
     TACAGTAGTA AAAGGATACC CAAAAATAGC GCCCTCCAAG GACGGACCAG CCCAGCGTCA      1920
     ACGCTTAAAC AACCCACAAA CGAAACAAAT ACTGCAGCAA CACCGATCGA ATACACAGCA      1980
     GAATAACTCA TCTGATGTGC AAGTATTCTT ACAACAGCAA CAACAACAGT TTCTGGAATG      2040
     GCAACAGCAG ATCCAACAAC AACAACACCA ACAGTTTCTT ATGTGGTTGC AACAGCAGCA      2100
     GCAAGAACAA CTACAGTATA AAAGCCAAAC CAATCAACGA CTGGAAAAGC TTGAAAAAAT      2160
     GGTTCTTGAA CTAGCGAATA TGTTAAAAGA ATGGGCTGGG AGTGAACTTA AGCCCCAGCT      2220
     CTTTAACAAC GTCTCAGCCT CCCTATGAAT CCACTAAAGA TTCTTATTTG GAATGCTAAC      2280
     GGCATTTCAA GAAAAGCCAA AGATGTTGAG CTGTTCGCGC ACAACAAAAA GATAGACATC      2340
     CTTCTTGTGA CTGAACTAAG ACTCAAAAGA GGGGAAACTG TAAAGATATA TGGATATGCG      2400
     TACTATCCAG CATATAGGCC ATCCCTTAAT AATAATAGTG TTGGCGGAGT AGCGGTGTTC      2460
     GTGAGGACAA CTCTTCGCCA CTTTCCACAA AGGGTCATTG AGACACGCCA CATACAATTG      2520
     TCATCAGTAA AAGTAGCCAC AGGACTCGGG GACCTGCAGT TTAGCGCTAT TTACTGCTCC      2580
     CCAAGTACTA GAATCGAGGA AAGACATTTT ACTGACATAA TACGCGCCTG CGGCCAAAGG      2640
     TACTTGGTAG GTGGCGACTG GAATGCCCGC CACTGGCTTT GGGGCGACAC TTGCAATTCA      2700
     CCTCGCGGGC GGGAACTAGC AGAAGCCTTG TCCGTGACTG GAGCTAAGAT CCTCGCAACT      2760
     GGCTCTCCGA CAAGGTATCC GTATGTGCCC AGCCATACGC CCTCATGCAT AGATTTCGCA      2820
     GTGTATCATG GTATACCAGA CCACCTAGCA ACTATAACAC AAAGCTGGGA CTTGGATTCT      2880
     GATCACTTGC CTCTTATCAT TAGCATTGAG ACAGACAGTA TTCATGTCAA TCCAAGTCCC      2940
     AGGCTAGTCA CCAAACACAC TGACCTCCTT GCCTTTAGCC GACAATTGGA GAGCCTTATT      3000
     TCGCTGAACA CCACGCTTAA TTCTGGTGAG GAAATTGAAA TGGCTGTTGA CAACCTAACT      3060
     GAAAGCATAC ATAGGGCCGC GGCTGTCTCT ACTTCTCCCG TCCCTCGGAT AGGCACCACA      3120
     TATGGGATAG TCTTGACAAG AGAGGCTAGA GAGCTTCTGA CACAGAAAAG AAGACTCCGA      3180
     AGGCGAGCAA TCCGATCTCA AGACCCCTGG GACCGACTTT TATGGAACCG TGCTGCAAAG      3240
     CAACTACGAA ACGTCCTCAG AGAACTTCGA AGCAACTTTT TTGAGCAGAA ACTAGCTAGT      3300
     ATGGACTACA CAGTGGATGC TGGATACTCG CTATGGAAAT GCACCAAGTC CCTTAAAAGA      3360
     CAGCCGTTTA GACAGGTTCC TATAAGGTGT CCGGGAGGCG AACTTGCTAA AAATGAAGAG      3420
     GAGCAGGCTA ATTGTTTTGC AAATCATCTG GAGACAAGGT TCACCCACTT CCAATTCGCT      3480
     ACAACGGAGC AGTATCAAGA GACGCTTGAT AGCCTAGAGA CACCTCTGCA AATGTCACTA      3540
     CCCATTAAGC CCATCAGGGT TGAGGAAATT GTCGAAGCTA TCAAATCTCT TCCGTTAAAG      3600
     AAGTCTCCTG GCATCGACAA CGTTTGCAAT GCCACACTAA AAGCACTACC TGTTCGAGCA      3660
     ATTCTCTACT TGGCGCTGAT ATATAATGCC ATACTCAGGG TGCAGTTTTT CCCAAAGCAG      3720
     TGGAAAATGG CAGCAATCCT AATGATACAT AAGCCTGGTA AACCTGAAGA GAGCCCTGAA      3780
     TCGTACCGAC CCATAAGTCT TTTATCTTCG CTATCCAAGC TATGGGAACG ACTGATTGCC      3840
     AACAGATTAA ATGACATTAT GACCGAGCGT CGTATCCTGC CGGATCATCA GTTTGGCTTT      3900
     CGTCAGGGAC ACAGTACTGT GGAGCAGGTA CACAGACTGA CAAAACATAT CCTTCAGGCC      3960
     TTTGATGATA AGGAATACTG CAATGCTGTG TTCATTGACA TGCAACAGGC ATTCGATAGG      4020
     GTCTGGCATG ACGGCCTTAT CAGCAAAGTT AAAAAGTTAT TCCCAGCACC ATACTATGGA      4080
     GTCCTAAAAT CATACTTGGA AGATCGGAGA TTCATGGTCA GGGTCAGAAA CTCCTACTCG      4140
     ATTCCCCGCG TTATGAGAGC TGGAGTTCCG CAGGGCAGCG TACTGGGACC GTTGCTCTAC      4200
     TCAGTATTTA CTGCAGATCT GCCCTGCCCA AACGCCTATC ATATGGCAGA TCCCAGGAAG      4260
     GCCCTTCTTG CTACGTACGC TGACGATATT GCCCTGCTGT ACAGCTCTAA TTGTTGCAAC      4320
     GAGGCAGCAA GGGGTCTCCA AGAGTACCTC ACCACTCTGG CTGCATGGTG CAAAAGATGG      4380
     AATTTAAAGG TCAATCCGCA AAAGACCATC AATCCCTGCT TCACCTTGAA GACCTTAAGT      4440
     CCCGTCACCG CACCCATAGA GCTGGAAGGT GTAATCCTAG ATCAACCTTC ACAGGCTAAG      4500
     TACCTCGGGA TTACCCTTGA TAAACGGTTG ACTTTCGGCC CGCACCTGAA AGCTACGACT      4560
     CGGAGATGTT ATCAAAGGAT GCAACAACTT CGATGGCTGT TAAACAGAAA AAGCACCATG      4620
     ACACTGAGAG CCAAAAGAGC AGTCTACGTC CACTGCGTAG CCCCGATCTG GCTGTACGGA      4680
     ATACAGATCT GGGGTATCGC AGCAAAATCC AACTACAACC GCATTCAGGT ATTGCAAAAT      4740
     CGTGCCATGC GTGCAATTAC AGACTGCCCA TACTATGTAC GTGGCACTAC CCTTCACCGT      4800
     GATCTGAATC TTCATACAGT GGAAGAGCAG ATCTCCAGGC ACACCAGCAG ATATAGTGAT      4860
     AGACTAAGAC GACACCACAG TATACTTGCT AGACGCTTAC TCCCTGCTAG GCCTCTAAGG      4920
     AGATTAAAAA GGAAGGGTTT CGCCAAAACA CTTGGACAAC CCTAAAGACC CCCTCGAAAT      4980
     ATGAGACAAA GTTGTAAGTC CTCACATGAT TAGTGAGAGG TTTGGTTCTA TCTTTTATAT      5040
     GTTAATTGCG CTGTTATGTT ACTGTTATTG CATTGTATTG ATTCATCGCT TCTAAATAAA      5100
     TAATAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AA                         5142
//
ID   DMU89994   standard; DNA; INV; 6411 BP.
XX
AC   U89994;
XX
DR   FLYBASE; FBgn0010302; Burdock.
XX
FT   source          U89994:1..6411
FT   SO_feature      five_prime_LTR ; SO:0000425:1..275
FT   SO_feature      three_prime_LTR ; SO:0000426:6136..6411
FT   SO_feature      CDS ; SO:0000316:564..2057
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0043782; Burdock\gag"
FT                   /db_xref="SPTREMBL:O01350"
FT                   /protein_id="AAB50147.1"
FT                   /translation="MSDSDNLLDNLVSSLNKWSAHQASRQNSAEKNNKSSDNWWSKTKT
FT                   TSEMEFEAQLKAIVESAVAGALAVQKQSFEKQLQEMNERIGKLTVNTPEVETYVDAEIR
FT                   PGVVCSEPLDILKSLPDFDGKSETYVSWRKAAHVAFKVFKDYEGSSTFYQALGIMRNKI
FT                   KGPANTVLASFNTPLHFKAMISRLDFTYSDKRPIYLIEQELSTLRQGDMTLTEFYDEVE
FT                   KKLTLLTNKTIMTFDSALAMSLNEKYRTDALRVFVTGAKKSLSDILFAKGPKDLPTALA
FT                   LAQEVESNHERYQFALIYSKNIGDRGQKIEQRHSDKDRNSIMPMQTKNPYFSKRQVHTY
FT                   DNQERQDPVQLTNPDVSMRSRRTGNFGQTPFPTQGNIWPSQQQNSWPSQQQYSWPSQQQ
FT                   NSFRTQNQFASQPQQQNTSQAQGHFGYAQASKRPTSGSARFTGPKQQRINYLPHEKGQC
FT                   EEDTDGYQKEAEAEVDDYEDELVNYDHVHFLATNPCYRT"
FT   SO_feature      CDS ; SO:0000316:<1994..5119
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0043781; Burdock\pol"
FT                   /db_xref="SPTREMBL:O01351"
FT                   /protein_id="AAB50148.1"
FT                   /translation="GRTSELRSCSFFSHKSLLPYIEREIAGRTIKLLIDTGASKNYIQP
FT                   LPELKNIMPVQNKFTVKSLHGCNTVKQKCFIKLFNTSVQFFILPSLSSFDAIIGLDLLK
FT                   QGNATLDFKNKTLNINNEVESIQFLRCDSVNFANIENIVVPNQISNKFHTMLRNRLAVF
FT                   AEPEEALPYNTNIVATIRTEDDQPIYSKLYPYPMGVSDFVNKETHALLKDGIIRPSSSP
FT                   YNNPVWVVDKKGTDEEGNTKKRLVIDFRKLNLKTIDDKYPIPNVVWILSNLGKARFFTT
FT                   LDLKSAFHQILLAEKDRAKTAFSVGNGKYEFCRLPFGLKNAPSIFQRAIDDVVRDRIGK
FT                   SCYVYVDDVIIFSNGIEDHVNDVAWVLDRLSGANMRVSKEKSFFFKESVEYLGFMVSSG
FT                   GITTSPSKVEAIQKYNQPTNLFSVRSFLGLASYYRCFIKDFASIARPLTDILKGENGKV
FT                   SASQSKKIPISFDERQCSAFEKLKNVLVSENVMLLYPDYRKAFDLTTDASAFGLGAVLS
FT                   QDGKPVTMISRTLQDRELNFATNERELLAIVWALKSLRNYLYGVKNLNIFTDHQPLTYA
FT                   VSDRNPNAKIKRWKAFIDEHNAKIFYKPGKETYVADALSRQAIHVLEDEPQSDIATIHS
FT                   EISLTFTIETIDKPVNCFRNQIVIDEGTADSTRTFVIFGSKTRHLIQFLDKETLIGRIR
FT                   DVVKPDVVNAIHCELPVLAFIQNSLVNDFPATTFRHTMKMVSDIFNQTEQREIVSLEHN
FT                   RAHRAAQENVKQILQYYFFPKMSQIAATFVSNCLVCQKAKYDRHPQKQILGRTPIPSHV
FT                   GETLHIDIFSTGRNYFLTCIDKFSKFAIVQPIGSRTITDLEPAIMQLMNFFPHSKTIFC
FT                   DNEPSINSESIKSLLKNRFNVDIANAPPLHSTSNGQVERFHSTLLEIARCLKLDSGMND
FT                   TVNLILQATIEYNKTVHSVTNRRPIDIIHSTPPELANEIVEMVNEAQEKQLRRENVTRR
FT                   DRTFEVGETVMVKQNNRLGNKLTPRYREELIEADLGTTVLIKGRVVHKDNLR"
XX
CC   Derived from U89994 (g1905850) (Rel. 51, Last updated, Version 1).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 6411 BP;  2219 A; 1259 C; 1204 G; 1729 T; 0 other;
     AGTTAACACA ATCACAAAAC ACCCGAAATA TAGTCGTAAG CCTCAAGTGC TTTTCCCATC        60
     TATAGATCGA GCTTTACCTA TAAGAAACTG TAACTTGTTA AGCTTTAGAG ATAAGAACTC       120
     TTGCTATACT TAAGTCAGTC GATTTTGGAA GATTAGAAGC GTCGGTCATC GCCACGTACT       180
     TACTATTCGT CTCATTAAGT GCAGACCGCG CAAGCCTATT GTAATTAATA AACTTACGCT       240
     AATAAATATA TGGAAAATCT ACTAAAATGA TAATTGGCGC CCAAACGGAT ATAAAAACCT       300
     ACGATAACTG AATAATTATA AATAAATAAC AAAAGGAGGA TCCGGAGACA AAACCAGCGG       360
     CTTTGGCTAA TTAACTCTAA CCTAAGAAAT AAAAATTTGC TGATTACATA AAATATAATA       420
     TTAATTACTA AGACCATCTA CCTTAAAATT GTTTGTTAAT CACTATTATT ATATTGTAAG       480
     TATAACGCTT ATTGAACGAA TTAAAAATAT TATTATTATT ATTATATTAT AACCTATGCA       540
     AAGAGTATTG ATAATAAAAA TACATGAGTG ACAGTGATAA CCTTTTAGAC AACCTAGTGT       600
     CAAGCTTAAA TAAATGGTCA GCGCACCAGG CAAGTAGGCA AAACAGTGCA GAAAAAAATA       660
     ATAAGTCATC AGATAATTGG TGGTCAAAAA CAAAGACAAC TAGCGAAATG GAATTTGAAG       720
     CTCAGTTAAA AGCGATCGTA GAGAGTGCTG TTGCCGGTGC GCTCGCAGTC CAAAAACAAT       780
     CATTTGAAAA GCAATTGCAG GAGATGAATG AGCGAATCGG GAAATTAACA GTGAACACCC       840
     CAGAGGTGGA AACTTATGTA GATGCTGAAA TTAGACCAGG TGTTGTCTGT AGCGAGCCTC       900
     TAGATATACT TAAATCTCTG CCAGATTTTG ATGGCAAAAG TGAAACATAT GTGTCGTGGA       960
     GAAAAGCGGC TCATGTCGCT TTTAAAGTTT TCAAAGATTA CGAGGGAAGT TCAACATTTT      1020
     ACCAAGCTCT TGGTATTATG CGAAATAAAA TAAAAGGTCC AGCGAATACA GTATTGGCTT      1080
     CTTTTAATAC TCCGTTACAT TTCAAAGCAA TGATCAGCCG TCTTGATTTC ACATATTCTG      1140
     ACAAAAGGCC GATCTATCTA ATCGAACAAG AGCTATCAAC TTTGCGACAG GGAGACATGA      1200
     CTCTTACTGA ATTCTACGAT GAAGTCGAGA AAAAACTGAC CCTACTTACC AACAAGACAA      1260
     TAATGACATT TGATAGTGCC TTGGCGATGT CACTGAATGA AAAGTACAGG ACGGACGCGT      1320
     TACGTGTATT TGTAACCGGA GCTAAGAAAT CGTTGAGCGA CATTCTTTTT GCAAAAGGTC      1380
     CAAAAGATTT ACCAACTGCT CTCGCTTTAG CGCAAGAGGT CGAGTCGAAC CATGAGCGTT      1440
     ACCAATTCGC CCTTATTTAT TCTAAAAATA TTGGAGACAG GGGTCAGAAA ATCGAACAAA      1500
     GGCACAGCGA TAAGGATAGA AACTCAATCA TGCCCATGCA AACTAAAAAC CCATATTTTA      1560
     GCAAGCGTCA GGTGCATACT TATGATAACC AGGAAAGACA AGATCCAGTC CAGTTAACAA      1620
     ATCCTGATGT ATCCATGCGA TCTAGAAGAA CTGGAAATTT TGGACAAACT CCATTTCCGA      1680
     CTCAGGGAAA TATTTGGCCA TCCCAACAGC AAAATTCTTG GCCATCTCAA CAACAATATT      1740
     CTTGGCCATC CCAACAACAA AATTCATTTC GAACACAAAA TCAATTCGCA TCGCAACCCC      1800
     AACAGCAAAA CACAAGTCAG GCTCAGGGAC ATTTTGGGTA TGCGCAAGCA TCAAAAAGAC      1860
     CAACGAGTGG CAGTGCAAGG TTTACAGGGC CAAAACAGCA GAGGATCAAC TACTTACCTC      1920
     ATGAGAAAGG TCAATGTGAG GAAGATACAG ACGGTTATCA AAAGGAGGCA GAAGCGGAGG      1980
     TTGATGATTA TGAGGACGAA CTAGTGAATT ACGATCATGT TCATTTTTTA GCCACAAATC      2040
     CCTGCTACCG TACATAGAAA GAGAGATAGC AGGGAGAACC ATAAAACTTT TGATTGACAC      2100
     CGGGGCTTCG AAAAATTACA TACAGCCCCT CCCTGAATTA AAAAACATAA TGCCGGTACA      2160
     AAATAAATTC ACGGTAAAAT CGCTTCATGG TTGCAACACC GTCAAACAGA AATGCTTTAT      2220
     TAAGCTATTT AACACATCTG TTCAATTCTT TATTCTTCCA AGTCTCTCTA GTTTTGACGC      2280
     AATAATAGGA CTTGACCTTT TGAAACAGGG AAATGCAACG TTAGATTTTA AGAACAAAAC      2340
     GTTGAATATC AACAATGAAG TGGAATCTAT TCAGTTTTTG AGATGTGACA GCGTAAATTT      2400
     CGCCAACATA GAGAATATTG TGGTTCCAAA TCAGATATCT AATAAATTCC ATACAATGCT      2460
     TCGAAACCGA TTGGCCGTCT TTGCGGAACC GGAAGAAGCA CTGCCGTATA ATACCAACAT      2520
     TGTTGCCACA ATACGTACTG AGGACGACCA ACCCATTTAC TCAAAACTCT ATCCGTACCC      2580
     CATGGGCGTA TCGGATTTTG TGAATAAGGA GACACATGCT TTGTTAAAGG ACGGAATTAT      2640
     CAGGCCCTCG TCGTCACCTT ACAACAATCC GGTTTGGGTA GTCGATAAAA AAGGTACAGA      2700
     TGAAGAGGGA AATACTAAGA AAAGGTTGGT TATAGATTTT AGAAAACTAA ATTTAAAAAC      2760
     AATCGACGAC AAGTACCCTA TACCAAACGT AGTATGGATC TTGTCAAATT TGGGAAAAGC      2820
     CAGATTCTTT ACAACCCTTG ACCTTAAATC GGCGTTTCAC CAAATTCTGC TCGCAGAAAA      2880
     GGATAGAGCG AAAACTGCCT TTTCAGTAGG AAATGGAAAA TACGAGTTTT GCCGTTTGCC      2940
     GTTTGGCTTG AAAAATGCCC CAAGTATTTT TCAACGTGCT ATTGATGATG TTGTTAGGGA      3000
     CCGTATAGGA AAGTCATGTT ACGTTTACGT TGACGACGTA ATAATATTTT CAAACGGAAT      3060
     TGAGGACCAC GTAAACGACG TTGCTTGGGT ACTAGACAGA CTGTCTGGGG CAAACATGAG      3120
     GGTTTCTAAA GAGAAATCGT TTTTCTTCAA GGAAAGCGTC GAGTATCTCG GATTCATGGT      3180
     GTCAAGTGGA GGTATCACAA CCAGTCCTAG CAAAGTAGAG GCTATTCAGA AATATAATCA      3240
     ACCTACTAAT CTGTTTAGTG TTCGATCGTT TTTAGGGCTA GCAAGTTATT ACCGCTGCTT      3300
     TATTAAGGAC TTCGCCTCTA TTGCTAGACC ACTCACTGAC ATTCTGAAGG GTGAAAACGG      3360
     AAAGGTTTCC GCAAGCCAGT CTAAAAAGAT ACCAATTTCT TTCGATGAAA GACAATGTTC      3420
     TGCTTTTGAG AAGCTTAAAA ATGTTCTTGT CTCCGAAAAT GTAATGTTAT TGTATCCCGA      3480
     TTATAGAAAA GCCTTTGACT TAACAACAGA CGCTTCGGCT TTTGGCCTGG GGGCAGTCTT      3540
     ATCACAGGAT GGCAAGCCTG TTACAATGAT TTCGAGAACT TTACAGGATA GAGAACTTAA      3600
     TTTCGCAACA AATGAACGAG AACTTTTGGC CATCGTTTGG GCTTTAAAGT CTCTTAGGAA      3660
     CTATCTATAT GGTGTCAAAA ACTTAAACAT TTTTACAGAT CACCAGCCGT TAACATACGC      3720
     CGTGTCAGAT AGGAATCCAA ATGCAAAAAT CAAGAGATGG AAGGCGTTTA TAGACGAACA      3780
     TAATGCTAAA ATTTTCTATA AACCTGGCAA GGAGACCTAT GTTGCCGATG CACTATCCAG      3840
     GCAGGCTATT CATGTCCTAG AGGACGAACC CCAGTCAGAC ATTGCAACAA TACATAGCGA      3900
     AATTTCATTG ACTTTTACAA TCGAAACTAT CGACAAGCCG GTTAACTGTT TTAGAAACCA      3960
     AATTGTGATA GATGAGGGCA CCGCAGACTC AACTCGAACT TTTGTTATTT TCGGAAGCAA      4020
     GACAAGGCAT CTAATACAGT TTCTAGACAA AGAGACCTTA ATCGGAAGAA TTCGTGATGT      4080
     GGTTAAGCCG GATGTAGTGA ATGCGATACA CTGCGAATTA CCTGTACTAG CTTTCATTCA      4140
     AAACAGTCTT GTAAATGACT TTCCAGCAAC AACCTTCCGA CACACTATGA AAATGGTCAG      4200
     CGACATTTTT AATCAAACTG AGCAACGGGA AATAGTGTCT TTGGAGCACA ACAGAGCGCA      4260
     TAGGGCAGCA CAGGAGAATG TAAAACAAAT TCTTCAATAC TACTTTTTCC CTAAAATGTC      4320
     ACAAATAGCC GCTACCTTTG TTTCTAACTG CTTGGTTTGT CAAAAAGCCA AATACGACCG      4380
     CCATCCGCAA AAGCAAATCC TCGGGAGAAC ACCTATTCCG TCACATGTAG GCGAGACATT      4440
     GCATATTGAT ATATTTTCTA CGGGCAGGAA TTACTTTTTG ACATGTATTG ACAAATTTTC      4500
     CAAATTCGCT ATTGTGCAAC CAATCGGCTC TCGAACGATA ACTGATTTAG AACCTGCAAT      4560
     TATGCAACTA ATGAACTTTT TTCCCCATTC AAAGACAATA TTTTGTGACA ATGAACCGTC      4620
     CATAAATTCC GAGTCAATCA AGTCACTTTT GAAAAATCGT TTTAATGTTG ACATAGCGAA      4680
     CGCACCTCCA CTTCATAGTA CCTCAAACGG ACAGGTTGAA AGGTTTCACA GCACGCTTTT      4740
     AGAAATAGCT CGATGCCTGA AACTTGACAG TGGAATGAAT GATACAGTCA ACCTTATTCT      4800
     TCAGGCAACA ATAGAATACA ATAAGACGGT GCACTCAGTC ACCAATAGAA GACCGATCGA      4860
     CATTATTCAT TCAACTCCTC CCGAATTGGC TAACGAGATA GTAGAAATGG TTAACGAAGC      4920
     TCAGGAAAAA CAGCTAAGAA GAGAAAATGT AACAAGACGA GACAGAACCT TTGAGGTGGG      4980
     AGAAACCGTC ATGGTAAAAC AAAACAATCG CTTGGGAAAT AAACTAACCC CACGGTATAG      5040
     GGAAGAACTA ATCGAAGCAG ACCTCGGGAC AACGGTCCTC ATAAAAGGGA GGGTCGTTCA      5100
     TAAAGATAAT CTACGCTAGG TTTAGTATTT CTTTTCCTTT TGTGACCATC GCCAAGTTAG      5160
     CAAAATACAA ACGTGAAATC TGAACACTAG TAAAAGAGTT TGCAAACATT TTTCAATTAA      5220
     ATATTTGTCA AATCCTTCTT ATTTAATCTT TAAACATTTT GTATTATTTC CGCTTCATCC      5280
     TCTTTAGAAA ATTTTAAAGG TATGTGATGA AATGCTAGAC CCGAATGATT TGAAAACTTA      5340
     AAGTCCACGC AACCACAAAT ATTTCCTGAA ACTACCATAG AAAATAAATG CATTACCAAA      5400
     ACGGCATAAT AACAGTATAG CGCACTCACT CTAATTAGAT TTCAAATTCC CGATTAAAAA      5460
     AAAAATAAAA CACTAATGTT ATCAATACCC TTTCCTGATT CTGTTCAACT AAAATAGGAA      5520
     AATCAATACT TGCAATCAAT AAGCGTTTTA CTACATACTT TAATATCAAA ATATCTGAAT      5580
     GAACTTTATT ATAAAATTAT AATTGTTATA CTTAATTATT GTCAAAACTT TAGTATTAAA      5640
     ACTGTAACTA CCTCTTAAGT AGATGAGAAG AGTAGAAGAG GGAATTAAGA TCTATCAACG      5700
     TAGTATCTGC TAAAGACGTA AAGATGCGGC AACTATTTCT GCGCCTGGGT ACTGAAACGA      5760
     CGAACTGAAT AATATCTGCC ATCAGACGCC AACCAGAGTG CGTTCAACAC ATACGTTTTG      5820
     ATGGTCAACT AGTTCAACCA ACATCAGCAT CATCGTCGTC AACAAGTCGA CGGTTACAAT      5880
     AAAGATTTTT TCCAAGTTCG CTACGATCAT CTCCAGAACC TTGTTGCGAA CCCATGACAT      5940
     GGAGAATCAG CAGCATTTAC GAACTTCTCG GATCATCCAG ACACGCAGAG CTGCCTTCCC      6000
     TTCGATGGTT TAACGCAGTA CCAGGTTGGC AGTATGGGAA CTTAGTGCAC AACCAATGTT      6060
     ACCCGTAAGA TCCGCTTTCA AATAGATTTG CCAATTGTAA AAAGTCTGTG GACAGCCTTC      6120
     GTCTTAGAAG GGGAGGAGTT AACACAATCA CAAAACACCC GAAATATAGT CGTAAGCCTC      6180
     AAGTGCTTTT CCCATCTATA GATCGAGCTT TACCTATAAG AAACTGTAAC TTGTTAAGCT      6240
     TTAGAGATAA GAACTCTTGC TATACTTAAG TCAGTCGATT TTGGAAGATT AGAAGCGTCG      6300
     GTCATCGCCA CGTACTTACT ATTCGTCTCA TTAAGTGCAG ACCGCGCAAG CCTATTGTAA      6360
     TTAATAAACT TACGCTAATA AATATATGGA AAATCTACTA AAATGATAAT T               6411
//
ID   DMCOPIA    standard; DNA; INV; 5143 BP.
XX
AC   X02599;
XX
DR   FLYBASE; FBgn0000349; copia.
XX
FT   source          X02599:21..5163
FT   SO_feature      five_prime_LTR ; SO:0000425:1..276
FT   SO_feature      three_prime_LTR ; SO:0000426:4867..5143
FT   SO_feature      polyA_signal_sequence ; SO:0000551:1990..1999
FT   SO_feature      polyA_signal_sequence ; SO:0000551:5063..5073
FT   SO_feature      primer_binding_site ; SO:0005850:277..291
FT                   /bound_moiety="tRNA:M-i-RB"
FT   SO_feature      CDS ; SO:0000316:432..4661
FT                   /db_xref="FLYBASE:FBgn0013437; copia\GIP"
FT                   /db_xref="SWISS-PROT:P04146"
FT                   /protein_id="CAA26444.1"
FT                   /translation="MDKAKRNIKPFDGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVD
FT                   DSWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLL
FT                   SLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLS
FT                   EENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIF
FT                   KGNSKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNT
FT                   SVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRND
FT                   HEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNVPV
FT                   INFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPC
FT                   LNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTY
FT                   LIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVP
FT                   HTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKT
FT                   PYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEPNGFKLWDAVNEK
FT                   FIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDN
FT                   IQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKR
FT                   DDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNE
FT                   EDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPE
FT                   NKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILS
FT                   LVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCW
FT                   FEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRY
FT                   LMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKI
FT                   NYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVL
FT                   RYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTK
FT                   RQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPS
FT                   CHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLLQ
FT                   DDQSNAE"
FT   SO_feature      CDS ; SO:0000316:join(432..1605,4555..4661)
FT                   /db_xref="FLYBASE:; copia\GIP-RB"
FT                   /db_xref="SWISS-PROT:P04146"
FT                   /protein_id="CAA26445.1"
FT                   /translation="MDKAKRNIKPFDGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVD
FT                   DSWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLL
FT                   SLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLS
FT                   EENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIF
FT                   KGNSKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNT
FT                   SVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRND
FT                   HEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSENQLADIF
FT                   TKPLPAARFVELRDKLGLLQDDQSNAE"
XX
CC   Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 5143 BP;  1874 A; 727 C; 971 G; 1571 T; 0 other;
     TGTTGGAATA TACTATTCAA CCTACAAAAA TAACGTTAAA CAACACTACT TTATATTTGA        60
     TATGAATGGC CACACCTTTT ATGCCATAAA ACATATTGTA AGAGAATACC ACTCTTTTTA       120
     TTCCTTCTTT CCTTCTTGTA CGTTTTTTGC TGTGAGTAGG TCGTGGTGCT GGTGTTGCAG       180
     TTGAAATAAC TTAAAATATA AATCATAAAA CTCAAACATA AACTTGACTA TTTATTTATT       240
     TATTAAGAAA GGAAATATAA ATTATAAATT ACAACAGGTT ATGGGCCCAG TCCATGCCTA       300
     ATAAACAATT AAATTGTGAA TTAAAGATTG TGAAAATAAA TTGTGAAATA GCATTTTTTC       360
     ACATTCTTGT GAAATAGCTT TTTTTTTCAC ATTCTTGTGA AATTATTTCC TTCTCAGAAT       420
     TTGAGTGAAA AATGGACAAG GCTAAACGTA ATATTAAGCC GTTTGATGGC GAGAAGTACG       480
     CGATTTGGAA ATTTAGAATT AGGGCTCTTT TAGCCGAGCA AGATGTGCTT AAAGTAGTTG       540
     ATGGTTTAAT GCCTAACGAG GTAGATGACT CCTGGAAAAA GGCAGAGCGT TGTGCAAAAA       600
     GTACAATAAT AGAGTACCTA AGCGACTCGT TTTTAAATTT CGCAACAAGC GACATTACGG       660
     CGCGTCAGAT TCTTGAGAAT TTGGACGCCG TTTATGAACG AAAAAGTTTG GCGTCGCAAC       720
     TGGCGCTGCG AAAACGTTTG CTTTCTCTGA AGCTATCGAG TGAGATGTCA CTATTAAGCC       780
     ATTTTCATAT TTTTGACGAA CTTATAAGTG AATTGTTGGC AGCTGGTGCA AAAATAGAAG       840
     AGATGGATAA AATTTCTCAT CTACTGATCA CATTGCCTTC GTGTTACGAT GGAATTATTA       900
     CAGCGATAGA GACATTATCT GAAGAAAATT TGACATTGGC GTTTGTGAAA AATAGATTGC       960
     TGGATCAAGA AATTAAAATT AAAAATGACC ACAACGATAC AAGCAAGAAA GTTATGAACG      1020
     CGATCGTGCA CAACAATAAT AACACTTATA AAAATAATTT GTTTAAAAAT CGGGTAACTA      1080
     AACCAAAGAA AATATTCAAG GGAAATTCAA AGTATAAAGT CAAGTGTCAC CACTGTGGCA      1140
     GAGAAGGCCA CATTAAAAAA GATTGTTTCC ATTATAAAAG AATATTAAAT AATAAAAATA      1200
     AAGAAAATGA AAAACAAGTT CAAACTGCAA CATCACACGG CATTGCGTTT ATGGTAAAAG      1260
     AAGTGAATAA TACTTCAGTG ATGGACAACT GCGGGTTTGT CCTTGATTCT GGTGCTAGTG      1320
     ACCATCTTAT AAATGATGAG TCGCTGTATA CCGACAGTGT GGAGGTTGTG CCTCCACTTA      1380
     AGATTGCAGT GGCCAAGCAA GGCGAATTTA TTTATGCCAC TAAGCGTGGT ATTGTCCGAC      1440
     TACGGAATGA CCATGAGATT ACACTGGAGG ATGTACTCTT TTGTAAGGAA GCTGCTGGTA      1500
     ATTTGATGTC CGTAAAGCGT CTCCAAGAGG CAGGAATGTC GATCGAATTT GACAAAAGCG      1560
     GTGTAACCAT TTCGAAAAAT GGGTTAATGG TTGTCAAAAA TTCAGGTATG TTAAACAATG      1620
     TACCTGTGAT CAATTTTCAA GCATATTCTA TAAATGCTAA GCATAAAAAT AATTTTCGTT      1680
     TATGGCATGA GAGGTTTGGC CATATAAGCG ATGGCAAATT ATTAGAAATA AAACGAAAGA      1740
     ATATGTTTAG TGATCAAAGT CTTCTAAACA ACTTAGAGTT ATCATGTGAA ATTTGTGAAC      1800
     CCTGTTTAAA TGGTAAACAG GCAAGACTTC CTTTTAAACA ATTGAAAGAT AAGACCCATA      1860
     TTAAAAGACC ACTTTTTGTA GTACACTCAG ATGTCTGTGG GCCTATTACT CCAGTTACTT      1920
     TAGATGATAA AAATTATTTT GTGATCTTTG TTGATCAGTT TACACATTAT TGTGTAACTT      1980
     ATTTAATTAA ATATAAATCT GATGTGTTTA GCATGTTTCA AGATTTTGTA GCCAAGAGTG      2040
     AAGCTCATTT TAATTTAAAG GTTGTGTACT TATACATTGA CAATGGTAGA GAATACTTGT      2100
     CAAATGAGAT GAGACAATTT TGTGTTAAGA AAGGAATTTC TTATCACTTA ACAGTGCCAC      2160
     ATACACCTCA GTTAAATGGT GTTTCTGAGA GAATGATAAG AACCATTACG GAAAAAGCTC      2220
     GAACCATGGT TAGTGGTGCA AAGCTAGATA AAAGCTTTTG GGGCGAAGCA GTATTAACTG      2280
     CTACTTATTT AATCAACAGA ATTCCTAGTA GAGCACTTGT TGATAGTTCA AAGACCCCAT      2340
     ATGAGATGTG GCACAATAAG AAGCCATACT TAAAACATTT GAGAGTGTTT GGTGCAACTG      2400
     TTTATGTGCA TATTAAAAAC AAACAAGGAA AGTTTGATGA TAAATCATTT AAAAGTATTT      2460
     TTGTGGGCTA TGAACCCAAT GGTTTTAAGT TGTGGGATGC TGTAAATGAA AAATTTATTG      2520
     TCGCAAGAGA TGTTGTTGTC GATGAAACCA ATATGGTTAA TTCTAGAGCT GTTAAATTTG      2580
     AAACAGTGTT CCTGAAAGAT AGTAAGGAAA GTGAAAATAA AAATTTTCCG AATGACAGTA      2640
     GGAAAATAAT ACAAACAGAA TTCCCGAATG AGAGTAAGGA ATGCGACAAC ATACAATTCC      2700
     TGAAAGATAG TAAGGAAAGT GAAAATAAAA ATTTTCCGAA TGACAGTAGG AAAATAATAC      2760
     AAACAGAATT CCCGAATGAG AGTAAGGAAT GCGACAACAT ACAATTCCTG AAAGATAGTA      2820
     AGGAAAGTAA TAAATATTTT CTGAATGAGA GTAAGAAAAG AAAGCGAGAT GATCACCTGA      2880
     ATGAAAGTAA GGGATCAGGC AACCCGAATG AGAGTAGGGA AAGTGAAACA GCAGAGCACT      2940
     TAAAAGAAAT TGGAATTGAT AATCCAACTA AAAATGATGG CATAGAAATT ATTAATAGAA      3000
     GAAGTGAGAG ATTAAAGACT AAGCCTCAGA TATCCTATAA TGAAGAGGAT AATAGTCTAA      3060
     ATAAAGTTGT TCTAAATGCT CACACTATAT TTAACGATGT CCCAAATTCA TTTGATGAAA      3120
     TTCAATATAG GGATGATAAA TCTTCTTGGG AAGAAGCCAT CAATACAGAG TTAAATGCTC      3180
     ATAAAATTAA TAATACTTGG ACAATTACAA AAAGGCCTGA AAACAAAAAT ATTGTAGATA      3240
     GCAGATGGGT ATTTTCTGTT AAATATAATG AACTTGGAAA TCCAATTAGA TACAAAGCTA      3300
     GATTGGTTGC ACGAGGATTC ACTCAAAAAT ACCAAATAGA CTATGAAGAG ACATTTGCTC      3360
     CTGTAGCTAG AATTTCAAGT TTCCGATTTA TATTGTCATT AGTAATACAG TATAACTTGA      3420
     AAGTCCATCA AATGGATGTA AAAACAGCTT TCTTAAATGG CACGTTAAAA GAGGAAATTT      3480
     ATATGAGACT TCCTCAAGGT ATATCGTGTA ATAGTGACAA TGTGTGTAAA TTGAATAAGG      3540
     CAATTTACGG ACTCAAGCAA GCGGCTAGAT GCTGGTTTGA AGTATTTGAG CAAGCATTGA      3600
     AAGAGTGTGA GTTTGTAAAC TCTTCAGTTG ATCGCTGTAT ATATATTTTA GACAAAGGTA      3660
     ACATCAATGA AAACATATAT GTATTATTAT ATGTAGATGA TGTGGTTATA GCTACAGGAG      3720
     ATATGACAAG AATGAATAAC TTCAAAAGGT ATTTAATGGA AAAGTTTAGG ATGACTGACC      3780
     TAAATGAAAT AAAACATTTT ATTGGAATTA GGATAGAGAT GCAGGAAGAT AAAATCTATT      3840
     TAAGCCAATC TGCATATGTT AAAAAAATTT TAAGTAAATT TAACATGGAA AATTGTAATG      3900
     CAGTTAGTAC TCCTTTACCT AGTAAAATAA ATTATGAATT ACTTAATTCA GATGAAGACT      3960
     GCAATACCCC ATGCCGTAGC CTCATAGGAT GTTTAATGTA CATAATGCTT TGTACACGCC      4020
     CAGATTTAAC TACTGCAGTA AATATCTTGA GCAGATATAG TAGCAAAAAT AACTCCGAAT      4080
     TATGGCAGAA CTTAAAAAGA GTTCTTAGAT ATTTGAAGGG CACTATCGAT ATGAAATTGA      4140
     TTTTTAAAAA GAACTTGGCA TTTGAAAATA AAATTATTGG TTATGTGGAT TCTGATTGGG      4200
     CTGGTAGTGA AATTGATAGA AAAAGTACAA CAGGGTATTT ATTCAAAATG TTTGATTTTA      4260
     ATCTCATTTG TTGGAATACA AAGAGACAGA ACTCAGTAGC AGCCTCATCA ACTGAAGCTG      4320
     AGTATATGGC CCTATTTGAA GCCGTGAGAG AAGCTCTATG GCTTAAATTT TTATTAACTA      4380
     GTATTAACAT TAAACTAGAA AACCCCATTA AAATTTACGA AGACAATCAA GGCTGTATTA      4440
     GCATAGCAAA CAACCCCTCA TGTCATAAAC GAGCTAAACA TATTGATATT AAATATCATT      4500
     TTGCCAGAGA GCAAGTTCAG AATAATGTGA TTTGTCTTGA GTATATTCCT ACAGAGAATC      4560
     AACTGGCTGA CATATTTACA AAACCGTTGC CTGCTGCGAG ATTTGTGGAG TTACGAGACA      4620
     AATTGGGTTT GCTGCAAGAC GACCAATCGA ATGCTGAATG AAATTTTTAT ATATATTTTT      4680
     CAAATTTAAA TTCCTGTAAA CATATTTTGT TACAATGATC TGATCGGGTT TTTCTGGGTT      4740
     TTCCCCGTAT CCTCGCAGCA AATGCTGGAT CAGTTAACAC TTCCCAGAAT GCACACCACC      4800
     CACATTTGAT AGTTACTAAT GAATATTATT GTTATGTTTT TAATTATAGA CGTTATTTTT      4860
     GAGGGGGCGT GTTGGAATAT ACTATTCAAC CTACAAAAAT AACGTTAAAC AACACTACTT      4920
     TATATTTGAT ATGAATGGCC ACACCTTTTA TGCCATAAAA CATATTGTAA GAGAATACCA      4980
     CTCTTTTTAT TCCTTCTTTC CTTCTTGTAC GTTTTTTGCT GTGAGTAGGT CGTGGTGCTG      5040
     GTGTTGCAGT TGAAATAACT TAAAATATAA ATCATAAAAC TCAAACATAA ACTTGACTAT      5100
     TTATTTATTA TTAAGAAAGG AAAATAAATT ATAAATTACA ACA                        5143
//
ID   DMW1DOC    standard; DNA; INV; 4725 BP.
XX
AC   X17551;
XX
DR   FLYBASE; FBgn0000481; Doc.
XX
FT   source          X17551:1..4725
FT   SO_feature      CDS ; SO:0000316:213..1910
FT                   /db_xref="FLYBASE:FBgn0024789; Doc\gag"
FT                   /db_xref="SPTREMBL:Q04134"
FT                   /protein_id="CAA35586.1"
FT                   /translation="MNQNDIRSQRQCEQDERRLSLQRNNAYFSFVSPQIGDRAPSPSTN
FT                   SKLLPSANDRPRSCSPSLPASAHKSWSEETASPTPLLSQRQTTVPGNCNTAITSAVTSL
FT                   ATATTSTSSAAQLIIAVPAVNNSAALTVCNNNNARKEESKQKQKSISTVQTGMDRYIQI
FT                   KRKLSPQNNKAGNQPKINRTNNGNENSAVNNSNRYAILADSATEQPNEKTVGEPKKTRP
FT                   PPIFIREQSTNALVNKLVALIGDSKFHIIPLKKGNIHEIKLQIQTEADHRIVTKYLNDA
FT                   GKNYYTYQLKSCKGLQVVLKGIEATVTPAEIIEALKAKNFSAKTAINILNKDKVPQPLF
FT                   KIELEPELQALKKNEVHPIYNLQYLLHRRITVEEPHKRINPVQCTNCQEYGHTKAYCTL
FT                   KSVCVVCSEPHTTANCPKNKDDKSVKKCSNCGEKHTANYRGCVVYKELKSRLNKRIATA
FT                   HTYNKVNFYSPQPIFQPPLTVPSTTPTISFASALKSGLEVPAPPTRTAHSEHTPTNIQQ
FT                   TQQSGIEAMMLSLQQSMKDFMTFMQNTLQELMKNQNILIQLLVSSKSP"
FT   SO_feature      CDS ; SO:0000316:1910..4576
FT                   /db_xref="FLYBASE:FBgn0024790; Doc\RTase"
FT                   /db_xref="SPTREMBL:Q04135"
FT                   /protein_id="CAA35587.1"
FT                   /translation="MASLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTNKNN
FT                   FHIPGYLFYGTNHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTL
FT                   AAVYCPPRFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKP
FT                   ENKLDYVSPGKPTYWPADPRKIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNML
FT                   TRPHIVDPPYRLTNFRTNWPRYQKYVCSHIELTTALSTKEDIDKSTETLENILVSAAKA
FT                   STPPVTYAKPNYIKTNREIERLVLDKRRLRRDWQSNRSPITKHMLKIATRRLTNALKQE
FT                   EKNSQRSYIEQLSPTSTKYPLWRAHRNLKTPIAPIMPLRSPSGTWFRSDEERASAFADH
FT                   LQNVFRPNPSTNTFILPPLIAANLDPQEPFEFRPCELAKVIKEQLNPRKSPGYDLITPR
FT                   MLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTC
FT                   LSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTA
FT                   IFLDVAQAFDRVWLDGLLFKIIKLLPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAG
FT                   VPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVER
FT                   WLADWRISINVQKCKQVTFTLNKQTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHI
FT                   EAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDII
FT                   QRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPLARKLI
FT                   RVCSQSRLHRNDLPAQQ"
XX
CC   Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 4725 BP;  1647 A; 1192 C; 822 G; 1064 T; 0 other;
     GACATTCGGC ATTCCACAGT CTTCGGGTGG AGACGTGTTT CTTTCAAGCT ACGAATAGCA        60
     AGTTCTAAAA ACTACAACAG TATAGTGAAA GTTAAACACA AAGTGTAAAG TGCAGTTTGC       120
     ACAACTAACA ATTATTGACT ATAGTAATTA TTTACTAAAA TAAATAATTA TTCCATATTG       180
     TTCTGGTAAT TGTTATATGT GGACTTAGAA CAATGAATCA AAACGACATA CGTTCTCAGC       240
     GACAATGTGA ACAAGACGAG CGCCGGCTCT CTTTACAACG CAACAATGCA TACTTTTCTT       300
     TCGTCTCACC GCAAATCGGT GATCGAGCAC CCTCACCTTC AACTAACTCG AAACTTTTGC       360
     CCTCAGCGAA CGACAGACCG CGTTCTTGCT CTCCCTCTCT GCCTGCTTCG GCTCACAAGT       420
     CGTGGAGCGA AGAGACCGCC TCTCCTACCC CGCTCCTCTC GCAGCGCCAA ACGACCGTCC       480
     CGGGTAACTG TAACACTGCA ATAACGAGTG CAGTGACCTC ACTGGCAACT GCCACAACAT       540
     CAACTTCGTC AGCGGCCCAA CTAATTATCG CTGTGCCAGC TGTAAATAAT TCAGCAGCAC       600
     TGACCGTTTG CAACAACAAT AATGCACGTA AAGAAGAATC AAAACAAAAG CAGAAGTCGA       660
     TTTCGACTGT GCAGACTGGC ATGGATCGCT ACATCCAAAT CAAGAGAAAG CTCAGCCCTC       720
     AAAACAATAA GGCAGGTAAT CAACCCAAAA TCAATCGAAC CAACAACGGC AATGAAAACT       780
     CTGCAGTAAA TAATTCAAAC CGATATGCTA TCTTGGCTGA TTCTGCGACC GAACAACCCA       840
     ACGAAAAAAC GGTAGGGGAA CCAAAAAAGA CCAGGCCTCC ACCAATTTTC ATACGAGAAC       900
     AAAGTACAAA TGCACTTGTA AATAAACTCG TTGCTTTGAT TGGTGACAGC AAGTTCCACA       960
     TTATCCCACT TAAAAAAGGA AATATTCATG AAATAAAACT ACAGATCCAA ACAGAAGCAG      1020
     ACCACCGTAT AGTGACTAAA TACCTAAATG ATGCTGGTAA AAACTACTAC ACATACCAAT      1080
     TAAAAAGTTG CAAAGGGCTA CAGGTAGTAC TTAAGGGCAT TGAAGCAACA GTGACACCAG      1140
     CTGAGATAAT TGAGGCTCTG AAGGCCAAAA ACTTTTCTGC AAAGACAGCT ATTAATATTT      1200
     TAAACAAAGA CAAAGTTCCG CAGCCACTAT TCAAAATAGA ACTCGAACCA GAGCTCCAGG      1260
     CACTAAAGAA AAACGAAGTG CACCCAATAT ACAATTTACA GTACTTGCTA CATCGGAGGA      1320
     TCACCGTGGA GGAGCCGCAC AAACGTATCA ATCCAGTTCA ATGTACTAAT TGCCAAGAAT      1380
     ACGGCCACAC CAAGGCATAC TGCACCCTTA AGTCCGTATG TGTTGTCTGT AGCGAACCTC      1440
     ATACTACCGC AAACTGCCCC AAAAACAAGG ACGATAAGTC TGTGAAGAAA TGCAGTAACT      1500
     GCGGGGAAAA ACATACTGCA AACTACAGAG GCTGTGTGGT GTACAAAGAA TTGAAGAGCC      1560
     GCCTAAACAA ACGTATTGCC ACAGCACATA CATACAACAA AGTCAATTTC TACTCTCCGC      1620
     AACCGATTTT TCAACCACCC CTAACTGTCC CAAGCACTAC TCCAACAATT TCTTTCGCTA      1680
     GCGCCCTAAA ATCCGGACTA GAAGTGCCCG CCCCACCGAC AAGAACTGCT CATTCCGAAC      1740
     ATACACCGAC AAACATCCAA CAAACACAAC AAAGTGGCAT CGAAGCTATG ATGCTATCCC      1800
     TACAGCAAAG CATGAAAGAC TTCATGACGT TCATGCAAAA TACTTTGCAA GAGCTCATGA      1860
     AAAACCAAAA TATCCTGATT CAACTTCTTG TATCTTCAAA ATCCCCATAA TGGCTTCCCT      1920
     ACGGATATCT CTGTGGAACG CAAATGGCGT TTCACGGCAT ACACAAGAGC TCACACAGTT      1980
     CATTTACGAA AAAAACATCG ACGTAATGCT ACTATCAGAA ACGCACCTCA CAAATAAAAA      2040
     CAATTTTCAT ATACCAGGAT ACTTGTTCTA TGGTACAAAT CATCCAGATG GTAAAGCTCA      2100
     TGGAGGCACT GGAATACTCA TCAGAAATCG CATAAAACAC CACCACTTAA ACAATTTTGA      2160
     CAAAAACTAC TTACAATCTA CGTCCATAGC CTTACAACTC AACAATGGTT CAACGACTCT      2220
     AGCCGCAGTC TACTGCCCAC CGCGCTTTCC AATCTCTGAG GATCAATTCA TGGAATTCTT      2280
     TAACACACTA GGTGACAGGT TCATCGCAGC GGGTGACTAT AACGCCAAGC ACACCCATTG      2340
     GGGATCTCGA CTTGTGTCGC CAAAGGGTAA GCAATTGTAC AATGCGCTTA CGAAGCCAGA      2400
     AAACAAGCTA GACTATGTAT CCCCGGGTAA GCCTACATAC TGGCCAGCAG ACCCAAGAAA      2460
     AATCCCAGAC CTGATCGATT TTGCAATTAC TAAACATGTC CCCCGCAACA TGGTCACCGC      2520
     CGAAGCACTA GCAGATTTAT CATCAGATCA CTCACCTGTT TTTCTAAATA TGCTAACTCG      2580
     CCCCCACATC GTCGACCCAC CGTATAGACT CACAAATTTT AGAACAAACT GGCCAAGGTA      2640
     TCAAAAGTAT GTCTGTTCAC ACATAGAACT AACGACGGCA TTATCTACAA AGGAGGATAT      2700
     AGACAAGTCA ACGGAAACTC TTGAAAACAT TTTAGTTTCG GCTGCAAAGG CTTCAACCCC      2760
     GCCAGTGACG TATGCAAAAC CAAACTACAT CAAAACTAAT CGCGAAATCG AGCGGCTGGT      2820
     ATTAGATAAA CGACGCCTAC GAAGGGATTG GCAGTCTAAT AGATCACCAA TTACTAAGCA      2880
     CATGCTTAAG ATAGCCACAC GCAGGCTTAC CAATGCTCTC AAACAAGAGG AAAAAAACAG      2940
     CCAACGTTCA TATATCGAGC AACTCTCTCC CACCAGCACT AAGTACCCTC TTTGGAGAGC      3000
     TCACAGAAAC CTAAAGACTC CAATAGCGCC AATTATGCCA CTCCGAAGTC CCTCTGGCAC      3060
     CTGGTTTCGA AGTGATGAAG AAAGAGCCAG TGCTTTCGCT GACCATTTAC AAAATGTATT      3120
     CCGACCAAAT CCCTCTACCA ACACATTTAT TCTCCCTCCT TTAATAGCAG CCAATCTAGA      3180
     TCCTCAAGAA CCCTTTGAAT TCCGACCATG TGAACTAGCA AAGGTTATCA AAGAGCAACT      3240
     GAACCCAAGA AAATCGCCTG GCTACGACCT AATAACTCCA AGAATGCTCA TTGAACTCCC      3300
     AAAGTGTGCT ATTCTTCACA TCTGCCTGTT GTTCAACGCA ATCGCCAAGC TTGGATACTT      3360
     CCCTCAAAAA TGGAAAAAGT CGACCATAGT AATGATTCCA AAGCCAGGAA AAGATAAAAC      3420
     GCAGCCATCA TCATATAGAC CGATAAGCTT ACTAACATGT CTTTCAAAGC TGTTTGAAAA      3480
     AATGCTACTC CTTCGGATTA GCCCTCATCT TAGAATAAAC AACACACTTC CAACACATCA      3540
     ATTTGGCTTT AGAGAAAAAC ATGGAACCAT CGAACAGGTC AACCGAATCA CGTCAGAAAT      3600
     TCGTACTGCT TTTGAACATC GAGAATACTG CACAGCCATT TTTCTAGACG TCGCGCAGGC      3660
     ATTTGACAGA GTGTGGCTCG ATGGACTTTT GTTTAAAATA ATCAAGCTGT TGCCCCAAAA      3720
     CACACATAAG CTACTGAAGT CATACCTATA TAACAGAGTG TTTGCAATAA GATGCGATAC      3780
     AAGCACTTCA CGCGATTGCG CAATCGAAGC TGGAGTGCCG CAAGGCAGTG TACTGGGTCC      3840
     AATCTTATAC ACCCTGTATA CGGCGGATTT CCCCATAGAC TACAATCTAA CAACCTCCAC      3900
     GTTCGCTGAT GATACCGCGA TACTCAGTCG CTCGAAATGC CCAATAAAAG CCACGGCACT      3960
     CCTATCCCGA CACTTAACAT CTGTAGAACG ATGGCTTGCC GACTGGAGAA TTTCAATAAA      4020
     TGTTCAAAAA TGCAAGCAGG TTACCTTTAC CTTAAACAAA CAAACATGCC CACCACTGGT      4080
     CTTGAATAAC ATATGCATTC CACAAGCCGA CGAGGTAACA TATCTGGGAG TTCATCTGGA      4140
     CAGGCGGCTC ACTTGGCGCA AACATATAGA AGCCAAATCG AAACATCTTA AACTTAAAGC      4200
     AAGGAACCTC CACTGGCTCA TAAATGCTCG CTCTCCACTT AGTCTGGAGT TCAAAGCTCT      4260
     TCTATACAAC TCCGTCTTAA AACCTATCTG GACTTATGGC TCCGAGCTGT GGGGCAACGC      4320
     ATCCAGAAGT AACATAGACA TTATTCAGCG AGCACAGTCA AGAATTCTGA GAATTATCAC      4380
     TGGAGCGCCG TGGTACCTTC GAAACGAAAA CATACACAGA GACCTAAAAA TCAAATTAGT      4440
     AATCGAAGTA ATAGCTGAGA AAAAAACGAA GTATAACGAA AAGCTGACCA CCCATACAAA      4500
     TCCCCTCGCA AGAAAACTAA TCCGAGTATG CAGTCAAAGC CGGCTGCACC GCAACGACCT      4560
     CCCAGCCCAG CAATAAACTT ATTAGGGCAT TAATGAAAAA AAAAAACTAT CACTAAGTGA      4620
     AAGTTAATTA AGTTAGATTA AGATTTGAAC ACTTATTGTT AGTCTCTTAA CACAAAGGGA      4680
     AGATTCAATA AATAATAAAA ATTAAAAAAA AAAAAAAAAA AAAAA                      4725
//
ID   F     standard; DNA; INV; 4708 BP.
XX
AC   AC005198;
XX
DR   FLYBASE; FBgn0000652; F-element.
XX
SY   synonym: Jiminy
XX
XX
FT   source          AC005198:38639..43358
FT   SO_feature      CDS ; SO:0000316:192..1880
FT                   /db_xref="FLYBASE:; CDS1"
FT   SO_feature      CDS ; SO:0000316:1880..4561
FT                   /db_xref="FLYBASE:; CDS2"
FT                   /translation="MATLRIATWNANGVSQRKLELAQFLHEKHIDVMLLSETHLTSKY
FT                   NFQIRDYHFYGTNHPDGKAHGGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTL
FT                   LTLAAVYCPPRFTVLEAQFLDFFQALGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKT
FT                   IIKATNKLDHVSPGSPTYWPSDLNKLPDLIDFAVTKNISRSLVKAECLPDLSSDHSPV
FT                   LIHLRRYAENVKPPTRLTSSKTNWLRYKKYISSHIELSPKLNTESDIESCTCALQSIL
FT                   TAAALTATPKITNNTINSKKTNVQIEQLVHVKRRLRREWQSSRSPTAKQKLKVATRKL
FT                   ANALKQEEDDDQRRYIEQLTPTGTKQKSLWRAHSTLRPPTETVLPIKNSSGGWARSDE
FT                   DRANTFAAHLQNVFTPNQATSTFALPSYPVNRHQQHTPIVFRPKEITKIIKDNLSPKK
FT                   SPGYDLITPEMIIQLPHSAVRYITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVA
FT                   SSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEI
FT                   RTAFEYREYCTAVFLDVSQAFDKVWLDGLMFKIKISLPESTHKLLKSYLYDRKFAVRC
FT                   NTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQ
FT                   ATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTFTLNRQDCPPLLLNSIPLPKADEVTY
FT                   LGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTY
FT                   GSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVTNAITELKEK
FT                   YL"
XX
CC   K. O'Hare, Personal communication to FlyBase, 1 May 2000.
CC   CDS2 translation from M17214; AC005198 has a 1-bp deletion.
XX
SQ   Sequence 4708 BP;  1618 A; 1242 C; 857 G; 991 T; 0 other;
     AATCAATTAA TCAATTCGAT CGCCGACGTG TGAAGACGTT TTTATCGTGC TCCGCACAAA        60
     ATCGGTTGTT TTGAGTGAAG TGAACGCCAA ATAAAATAAA CTAAATAAAA AATCTGAAAG       120
     CGAAAGAGAC GCTCTATGCG ATGCAAGATC GCTTAAATAC ATAGTGAATT GTTATCTTAA       180
     ATAATAAAAC TATGAGTCAG AATGACACTC GCGCCCAGCG TCAGCGCGAG CATGACGAAC       240
     GCCGACTCTC AATTCAGCGC AACAACGCGT ACTTCTCCTA CGTCTCACCG ACAATCCCAA       300
     ACGCAGACAT CGAGCGGTCA ATAACCCATA GCCCAGGAAA CCTTCTTCTA CCAACAAATC       360
     AAGAAAGAGC GCGCTCCTGC TCTCCCGCTC TATTGGCTCC GACAGAAGCC CCGCTACCTC       420
     CAACAACAAC AGCTGGAGAG GGACCGGCAG CCCGCTCTGC CTCGTCATCG GCTGCACCCG       480
     CTCACGGTCT GACTAAGTCA GCGAAAGCAA AACCGCTAGC AATAAACGGT ACTGCTGCAC       540
     TGCCAGCAAA ACAAAACGAA AACGTAAACA AAAAAGCTGG GTCGACCTGG CAGACTGGAA       600
     TGGACCGCTA CATTACAATA AAGCGAAAGC TCAGCCCGGA AAATTCAGAT TTGGGAAACA       660
     AGCCGAAAAA TACACGCGAT AACTCTACCT TGATCAAAAA TGTAGCCCCT GCAAATACCA       720
     ACAGATTTGC CTTGCTGGTA GATACCGCTG AGGACGTGCC GCTGGGATCC GTTGATATCG       780
     AACCGAAGAA AACAAAGCCT CCGCCAATAT ACATCCGCGA GAAGAGCACA AGCCGTCTTG       840
     TAAATACTTT GATTGGCCTT ATTGGGAAAG ATAGCTTTCA TATAATTCCC CTCGTAAGAG       900
     GTACTATCAA CGAAATCAAA CTTCAGACGA AAACGGAGGA CGACTACAGA AAAGTCACAA       960
     ACTATTTTAC CGCACAAAAA ATAGGCTTCT ACACCTACCA GCTTAAAAGC AGCAAGGGCC      1020
     TGCAAGTAGT CCTGAAGGGC ATTGAGTCTG ATGTTACGCC CGAAGAGATA ACTGAGGCGC      1080
     TAAAGGAAAA GGGATTTTAC GCCAAAAACG TGTTCAATAT CAAAAACAGA AACAGGCAGC      1140
     CCCAACCACT CTTCAAGATT GAGCTTGAAC CAGAAAACAA GCCTCCTAGA AAAAACGAGG      1200
     TTCACCCAAT TTACAAACTC CAGCTCCTTT TGCACCGTAG GATCACGGTA GAAGAGCCGC      1260
     ACAAACGCAA CGCTCCTGTA CAATGTACAA ACTGCCAAGA GTATGGCCAC ACGAGGTCAT      1320
     ATTGTACACT TCGCCCGGTG TGCGTAGTCT GTGGAGATCT CCACGACTCC AAACAGTGTC      1380
     AAATTAACAA AGAAAATGCA TGCGAGAAAA AATGTAATAA CTGCGGGGGC AATCACACAG      1440
     CAAACTACAG AGGCTGTCCA ATCTACAAAG AGCTGAAAAT CCGTCTTCAC AAAAGAATGA      1500
     ACACGGCGCG GGCACACCAA GGATCAGCTA CCCTGATACC ATCAGAGACA AATCCTGAAG      1560
     TAATTTTCTC GAAAGCAGCT AGTTTCGCTC CCTGGCCTAC ATTCAACACT AACAAGACAA      1620
     CATTTGCTAA CGTTTTAAAA TCAGGTATGA CGCCTCCAAC CCAAAACTCC CGAACTCCAC      1680
     ATGAAGTGCA CACAAAATTA GACACACAAC AAAACTATCA CCCAGCTGCG CAGCAGGAAA      1740
     CAAAAACTGA AGCTATGATG CAAGCCTTAC AACAGAGCAT GATGGAATTT ATGACATTTA      1800
     TGAAGACCAC CATTCAAGAC ATGATGCGTA ATCAAAACCT TTTGATACAA ATGCTTGTAG      1860
     CCCAACAATC AAATAAATAA TGGCTACCTT ACGCATAGCT ACGTGGAACG CCAATGGCGT      1920
     CTCACAGCGC AAACTTGAGC TAGCTCAATT CCTACATGAG AAGCATATCG ACGTAATGCT      1980
     TCTTTCGGAA ACTCATCTCA CAAGCAAATA CAATTTTCAA ATAAGAGACT ACCATTTCTA      2040
     CGGTACAAAT CATCCCGACG GAAAAGCACA CGGTGGCACC GCCATACTCA TAAGGAACCG      2100
     TATGAAGCAC CACTTTTACA AAGAATTTGC GGAAAATCAT CTTCAGGCCA CATCTATCAA      2160
     CATTCAGCTG GATGACAACA CTCTCCTTAC ACTAGCGGCC GTATACTGCC CCCCCCGTTT      2220
     CACAGTATTA GAAGCTCAAT TCCTGGATTT CTTCCAAGCA CTAGGGCCAC ACTTCATTGC      2280
     AGCAGGCGAC TACAACGCTA AACATACTCA CTGGGGATCG CGACTTGTGA ACCCAAAAGG      2340
     AAAACAGCTT TATAAGACGA TAATAAAAGC CACTAATAAA CTTGACCATG TTTCCCCCGG      2400
     GAGTCCTACA TACTGGCCAT CAGACCTCAA TAAGCTGCCA GACCTGATCG ACTTCGCAGT      2460
     TACGAAAAAT ATTTCCCGCA GTTTGGTTAA AGCTGAATGT CTGCCGGATC TCTCATCTGA      2520
     TCACTCGCCT GTACTAATTC ACCTCCGCCG ATACGCAGAA AACGTGAAAC CACCAACCAG      2580
     ATTGACCTCT AGCAAAACAA ACTGGCTCAG GTATAAAAAA TATATAAGTT CACATATTGA      2640
     GCTAAGCCCA AAACTCAATA CTGAATCTGA TATAGAGAGC TGCACGTGTG CATTGCAATC      2700
     CATCCTTACT GCAGCAGCTC TTACTGCAAC ACCCAAAATA ACAAATAATA CAATTAATTC      2760
     AAAAAAGACC AACGTACAAA TCGAGCAACT CGTCCACGTA AAACGTCGCT TACGCAGAGA      2820
     ATGGCAATCT TCCAGATCCC CAACTGCAAA ACAAAAGCTA AAAGTAGCCA CACGGAAACT      2880
     GGCCAACGCT CTGAAACAAG AAGAGGACGA CGATCAGCGC CGATACATAG AGCAACTCAC      2940
     ACCAACAGGC ACAAAACAAA AGTCACTGTG GCGAGCCCAC TCAACTCTTC GCCCACCGAC      3000
     TGAAACCGTT TTGCCGATAA GGAATTCATC AGGTGGCTGG GCCCGTAGTG ATGAAGACAG      3060
     AGCCAACACA TTTGCCGCTC ACCTACAAAA TGTGTTCACG CCAAACCAGG CTACTAGCAC      3120
     ATTCGCGCTA CCGTCCTATC CCGTAAACCG CCATCAGCAA CACACCCCAA TTGTGTTTCG      3180
     TCCTAAAGAA ATAACTAAAA TAATCAAAGA CAATCTCAGC CCGAAAAAAT CCCCCGGCTA      3240
     CGACCTTATA ACACCGGAAA TGATCATCCA GCTGCCACAT TCTGCAGTTC GCTACATAAC      3300
     CAAGCTCTTT AATGCCATCA CCAAACTTGG TTACTTTCCA CAACGATGGA AGATGATGAA      3360
     GATCATAATG ATTCCAAAGC CTGGTAAGAA CCACACAGTC GCTTCATCTT ACAGACCAAT      3420
     AAGTCTACTC TCATGCATTT CGAAACTATT CGAAAAATGC CTGCTGATCC GACTTAATCA      3480
     ACATCTGATA TACCACAATA TAATCCCAGC CCACCAATTT GGATTTCGCG AAAGCCACGG      3540
     AACCATTGAA CAGGTGAATC GTATTACAAC GGAAATAAGA ACTGCATTTG AATATCGCGA      3600
     ATACTGTACA GCAGTATTTT TAGACGTATC CCAAGCATTC GACAAAGTCT GGCTCGACGG      3660
     CCTAATGTTT AAAATTAAAA CATCCCTACC CGAAAGCACA CACAAACTTC TAAAGTCTTA      3720
     CCTCTATGAC AGAAAGTTTG CAGTGCGGTG CAACACTGCC ACTTCCACTG TTCATACAAT      3780
     TGAGGCTGGA GTCCCCCAAG GCAGCGTTCT TGGGCCAACC TTATACCTCA TCTATACAGC      3840
     CGACATCCCT ACAAATAGTC GCTTAACGGT ATCCACATTT GCCGACGATA CAGCTATCCT      3900
     TAGCCGTTCA AGGTCCCCTA TCCAAGCTAC AGCACAGTTG GCACTGTACC TCATCGACAT      3960
     TGAGAAGTGG CTCTCTGACT GGCGAATAAA AGTAAACGAG CAAAAATGCA AGCACGTGAC      4020
     GTTTACGCTA AACAGACAAG ACTGTCCTCC GCTCTTGTTG AACAGCATAC CACTCCCGAA      4080
     AGCAGACGAG GTAACGTACC TAGGAGTACA CCTAGACAGA AGACTCACAT GGCGCAGGCA      4140
     CATTGAAGCC AAAAAAACCC AACTTAAACT CAAAGCCAAC AACTTACACT GGCTCATCAA      4200
     CTCTGGTTCT CCGCTCAGCC TAGATCACAA GGTCTTGCTC TACAATTCTA TATTGAAACC      4260
     AATCTGGACC TATGGCTCAC AGTTATGGGG CAATGCCAGC AACAGCAATA TTGACATCAT      4320
     TCAGCGAGCA CAATCAAAGA TTCTGAGAAC CATCACTGGG GCACCGTGGT ACGTTCGGAG      4380
     TGAAAACATC CAAAGAGACT TAAATATCCC ATCAGTTACC AACGCAATCA CGGAACTTAA      4440
     GGAAAAATAC CATAGCAAGC TTCACACGCA CCCCAACCAC CTAGCGCGAG GTCTAATCCA      4500
     GCTCAGCAGC CGTTCCCGTC TCCGGCGAAA GGACCTACCA ACCCAGCGAA TAAATTATTA      4560
     GGGCCGTTTA AACATAGAAC AGTTGGAAAA ATAATACAAC TGTTCAAAAA ATACTTGTTA      4620
     TAGTTAAGAT TTTTAAACTT ATTGTTAGTT CTTATACAAG AAGATTCAAT AAATAAAAGC      4680
     AAAGTAAAAT AAAAAAAAAA AAAAAAAA                                         4708
//
ID   FB   standard; DNA; ; 4347 BP.
XX
AC   X51937;
AC   X15469;
XX
DR   FLYBASE; FBgn0002949; NOF.
XX
FT   source          join(X15469:94..1010,X51937:1..3430)
FT   SO_feature      CDS ; SO:0000316:797..3874
FT                   /db_xref="FLYBASE:FBgn0044029; NOF\ORF"
FT                   /db_xref="SWISS-PROT:P16320"
FT                   /protein_id="CAA36201.1"
FT                   /translation="IQQLDTSANLTLNSTFPDDDPEFQITEASKNGPLPILYFNLELDL
FT                   ELWRSIAPKKDQKTEKLQPNWTDTMAKLIYKKVPLPCAFNFRKAKLSDKVDNIWLRIEG
FT                   YCNDCSSILKGHCLVKPDEQCGIMISVSVPDTRGIPHNKKRRCTGSRRLEIGNELILKK
FT                   AALWRKEATDNMNDDDPEPSYIPNLPTLRKLREEATNRHLGITKDRDPVSSLYLKKYEG
FT                   ELAGCILDIGLDEFFCIYCTGTQVKTYASRIKTIRKISIDATGSVVLPIQKPNGDSSYV
FT                   FLYQIVMEGDDSIFPVFQMLSAKHDTASIQFWLSRFISKSGHFPLEVVSDFSLALLNGI
FT                   SLSFNECRIATYIKKCFHSLLMEERTDLPPCYIRLDIAHLIKMICRKNVFKSKLPNLKD
FT                   FYTRCIGLATTCETKDSFAELIKSVLIVALSQSSGEDEKGDILSSYRNEKYLLARIATF
FT                   TAPDHKETIEDNCIPEDQEEIDEDVTDFISNIKIAAEEEALNCNSVNCRPNPYFLPELM
FT                   PPLIKLCKYFVLWTNVMKEKFCSKYDVGSSALVEAYFKDLKNTDMSIFHRPVRADKFVV
FT                   QHIRCIEAVCKLERAAMKRKTVKTPSFIKENAPKKMCSKETKGFLEEILEESEVEYLLQ
FT                   EENWKVKNKTIKPTEGNDAEDNDTDDENKEMDLSEQPKEKPRGKYLKKCPNVELLYNRP
FT                   HRRKQDEILHNGGSMGPVWIGKQLLQFKNTCPFDSLVEILSTAYIDNFYYKSLLDDFYT
FT                   DNLTIELVKKYAVEGVSSSLYCDRGLVLKSFFDEKHQIIKCDANIGSFIEKALNGVPSA
FT                   SSHRTHIKNNHDCRNQKYIHHRLEVIDVEKVGHLDVQEVVIPFIDEFFARTDGECKICG
FT                   GQQILERQPGPHVILDIEFAMDAFHQIHHNGLPGTTTLLQVPEEILIQEKKYILSGAIE
FT                   YVPAMGGEIGHYIAYCRRVIGSWEVHNDMCRQWKKFSALNTKMTLHILIYTRKN"
XX
CC   Derived from X15469 (g7962) (Rel. 36, Last updated, Version 3).
CC   Derived from X51937 (g8297) (Rel. 44, Last updated, Version 6).
CC   Takis Benos and Michael Ashburner, 25-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 4347 BP;  1461 A; 775 C; 885 G; 1226 T; 0 other;
     TATATTCTAT TGCCCACCAT ATAAACACGT GCCACTTTCC TAGTTTTAGG ATCTGCCTAC        60
     ATAACACGTG CAGACGCACA GGTGTTTCTG GGTTTATATA GACCAAAAAT TGGTTCCGAT       120
     TGCCAATCTT GTAATTTACA GTTTACCAGG TAATTACATA ATTTTCAAAC CTCACTTTAT       180
     GATAGGGTCC AATTTTTTAC CTGTGACAAA GTGTTAAATT TTTTAAGAAT GGGTTTTTCA       240
     TGGCAGGTCA GAATCCTCTA TAAAATCTAA AACACTTGTC GGTATTTGAA AATCGCTCTC       300
     CTCCTTGATT CTCATATTAG GTGTAAAAGA TAAATCCGGA ACTCATAATT AAAATATTTT       360
     TTATGTGAAA AAGTTGTGCG CGATTTTAAC TACGCTTACC CAGTGCTGGA AAAGTTAAAG       420
     TTGTTTTGTT TTTCAAAGAA AGTGAAAGTT GCTAAGCACG AACTTAAGAA ATCTGAGTGA       480
     TTGTGTTAAA TTTATTTGAA TCCTTGTGAA TTTTGTTGAC AGTCTTTTTA AAGACTTGCA       540
     AAATTTTCAT ATTATTCGGT TCTTGCTTTT ATTTTTATAC AACGCGTTTT TCCTTTAGGC       600
     ATACCTTTAT ACATTTACAG TGTAAACAAC AGTGTAAAAC GTGTAAATCA GTGCAAAATA       660
     GTTTTTTTTA TTTACTCCAT AAAAAATAAG TGTTACTGTC AGGATGCCGG CCAAACCGCA       720
     AGTCGATGGT CACACCTTAG TGGATGCATT TTGCTGCGCG AATATTTTTA CGGAGACTGG       780
     AGCTCTTAAG CCAAGAAGCG ATAAAGTTTG GATGGATATA AGCAACCAAT TGAAAGGAGC       840
     GATCAGCGCG AAGACGCTTA ATTTCTACGC CAGAATCAAT AGGAATAACA TGATAACTGT       900
     GGTTAAAGAA CGATGTGGAA TTCAACAGCT GGATACTAGT GCCAATTTAA CTTTAAATAG       960
     CACATTTCCT GATGATGACC CGGAGTTCCA GATCACCGAA GCTTCAAAAA ATGGACCATT      1020
     GCCTATTTTG TACTTTAACC TGGAGTTGGA CCTGGAATTG TGGAGATCAA TTGCCCCCAA      1080
     AAAGGATCAA AAAACTGAAA AACTGCAACC TAACTGGACG GATACTATGG CAAAGTTGAT      1140
     ATACAAAAAA GTTCCTCTTC CGTGTGCATT TAATTTTAGA AAAGCTAAAC TTTCCGACAA      1200
     AGTGGATAAT ATTTGGCTAC GAATTGAAGG CTATTGCAAT GACTGCAGCT CAATTTTAAA      1260
     GGGACATTGC CTTGTGAAAC CCGATGAACA ATGCGGCATA ATGATATCTG TTTCAGTACC      1320
     GGACACACGA GGTATACCTC ATAATAAAAA ACGACGGTGC ACTGGATCGA GACGACTTGA      1380
     AATTGGGAAC GAGTTGATTT TAAAAAAAGC TGCATTGTGG AGGAAGGAAG CCACCGACAA      1440
     CATGAATGAT GACGACCCAG AACCGAGTTA CATACCAAAT TTACCAACCC TTCGGAAACT      1500
     TCGTGAAGAG GCAACTAACA GACACCTAGG AATTACCAAG GATCGGGATC CAGTTTCATC      1560
     ATTATACCTT AAAAAGTATG AGGGTGAATT GGCTGGATGC ATTCTTGACA TTGGATTGGA      1620
     TGAATTTTTC TGCATATACT GCACAGGAAC CCAAGTAAAA ACATATGCAT CAAGGATAAA      1680
     AACTATTAGA AAGATTTCTA TTGACGCAAC TGGAAGCGTG GTGTTACCCA TCCAAAAACC      1740
     AAACGGTGAC TCTAGTTATG TTTTTCTGTA CCAAATTGTA ATGGAGGGTG ACGACAGTAT      1800
     ATTTCCAGTT TTTCAGATGC TGTCGGCTAA ACATGACACA GCCAGCATAC AGTTTTGGTT      1860
     AAGCAGATTT ATATCAAAGT CGGGGCATTT TCCACTGGAG GTTGTATCTG ATTTTTCCTT      1920
     GGCATTGCTA AATGGAATAA GCTTAAGCTT TAATGAGTGT AGGATTGCGA CGTATATAAA      1980
     AAAATGTTTC CACAGCCTTT TGATGGAGGA ACGGACGGAT CTGCCACCCT GCTATATTCG      2040
     ACTTGACATC GCCCACCTAA TTAAAATGAT ATGCCGGAAG AACGTCTTCA AAAGTAAATT      2100
     ACCGAACCTC AAGGATTTTT ATACTAGATG TATTGGTCTT GCAACAACGT GTGAGACAAA      2160
     GGACAGTTTT GCGGAATTAA TTAAATCAGT ACTGATTGTC GCACTGAGCC AATCCTCAGG      2220
     GGAAGATGAA AAAGGAGACA TTCTTTCAAG TTACAGGAAT GAAAAGTATC TGCTCGCCAG      2280
     AATAGCTACA TTTACTGCCC CGGATCACAA GGAGACCATT GAGGACAACT GCATACCAGA      2340
     GGACCAGGAG GAAATTGACG AGGATGTTAC GGACTTTATC TCTAATATTA AAATCGCTGC      2400
     CGAAGAAGAA GCGTTAAATT GCAATTCGGT CAACTGTCGG CCAAATCCGT ATTTCCTACC      2460
     TGAGCTAATG CCACCATTAA TTAAGTTGTG CAAATATTTT GTTTTATGGA CAAACGTGAT      2520
     GAAGGAAAAG TTCTGTTCCA AATATGATGT CGGCTCTTCG GCTCTTGTGG AAGCCTATTT      2580
     CAAGGATTTA AAAAACACGG ACATGAGCAT ATTCCACCGA CCAGTGAGAG CGGATAAATT      2640
     CGTGGTGCAA CATATCCGAT GCATCGAAGC TGTTTGCAAG CTGGAACGAG CCGCGATGAA      2700
     ACGCAAGACC GTTAAAACTC CCAGCTTTAT AAAAGAAAAC GCTCCTAAGA AAATGTGCAG      2760
     TAAGGAAACC AAGGGATTTC TGGAGGAAAT ACTTGAAGAA AGCGAAGTGG AATACCTTTT      2820
     ACAAGAAGAA AACTGGAAGG TGAAGAATAA AACAATAAAG CCCACGGAAG GAAATGATGC      2880
     TGAAGACAAC GACACTGATG ATGAAAACAA GGAAATGGAT TTAAGTGAAC AGCCCAAAGA      2940
     AAAACCAAGG GGAAAATATC TCAAAAAATG CCCCAATGTG GAGTTATTAT ACAATCGACC      3000
     ACATCGAAGG AAACAGGACG AAATTTTGCA TAATGGTGGA TCAATGGGAC CCGTCTGGAT      3060
     TGGCAAACAA TTATTGCAAT TCAAAAATAC TTGTCCGTTT GACTCTCTAG TGGAAATATT      3120
     GTCGACCGCA TACATAGACA ATTTTTATTA CAAAAGCCTA TTGGATGATT TCTACACTGA      3180
     CAACTTGACG ATAGAATTGG TGAAAAAGTA TGCCGTCGAG GGAGTTTCGT CCAGTCTCTA      3240
     CTGCGACAGA GGTCTGGTCC TAAAAAGTTT TTTTGATGAA AAACACCAGA TTATAAAATG      3300
     CGACGCAAAT ATTGGGTCTT TTATTGAAAA AGCGCTGAAT GGAGTACCCA GTGCGTCAAG      3360
     TCATCGGACC CATATAAAAA ACAACCATGA TTGCAGGAAC CAAAAATATA TCCACCATCG      3420
     GCTGGAGGTT ATAGATGTCG AAAAAGTTGG CCACCTCGAC GTCCAGGAGG TAGTGATCCC      3480
     CTTTATTGAT GAGTTTTTTG CAAGAACTGA TGGAGAATGT AAAATATGCG GTGGACAACA      3540
     GATCCTTGAA AGGCAGCCAG GACCGCATGT CATACTTGAT ATAGAATTTG CAATGGATGC      3600
     TTTTCATCAA ATTCATCATA ACGGTTTACC AGGAACGACC ACTTTACTTC AAGTGCCGGA      3660
     GGAAATTTTA ATACAGGAAA AGAAATATAT TTTAAGTGGT GCCATCGAAT ATGTTCCTGC      3720
     GATGGGAGGG GAAATTGGAC ATTACATTGC ATATTGCCGC AGAGTCATTG GATCTTGGGA      3780
     AGTGCACAAC GATATGTGCA GGCAATGGAA AAAGTTCTCA GCTCTAAATA CCAAAATGAC      3840
     ACTCCACATT TTGATATACA CCCGGAAAAA TTAATGTTTA TTTTTAAGCC TTGTTTAAAA      3900
     GTGTAAAAAA TATTTGTTGT TAAAAATTAC AATCTTAAGT CCTTTGCAAA CGTTGTTTAA      3960
     AAATAAAATT AAATTAATTA TTTTACAAAA CTTAACCCTT TTTCACTTTT ATACCTAATA      4020
     TAAAGAGGTC CGTAAAGTAT CAAGGAGGAG AGCGATTTTC AAATACCGAC AAGTGTTTTA      4080
     GATTTTATAG AGGATTCTGA CCTGCCATGA AAAACCCATT CTTAAAAAAT TTAACACTTT      4140
     GTCACAGGTA AAAAATTGGA CCCTATCATA AAGTGAGGTT TGAAAATTAT GTAATTACCT      4200
     GGTAAACTGT AAATTACAAG ATTGGCAATC GGAACCAATT TTTGGTCTAT ATAAACCCAG      4260
     AAACACCTGT GCGTCTGCAC GTGTTATGTA GGCAGATCCT AAAACTAGGA AAGTGGCACG      4320
     TGTTTATATG GTGGGCAATA GAATTTA                                          4347
//
ID   DMTNFB     standard; DNA; INV; 1106 BP.
XX
AC   V00246; J01084;
XX
DR   FLYBASE; FBgn0000638; FB.
XX
FT   source          V00246:1..1106
XX
CC   Derived from V00246 (g8708) (Rel. 36, Last updated, Version 3).
CC   Josh Kaminker 2 Aug 2002.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 1106 BP; 340 A; 228 C; 119 G; 419 T; 0 other;
     AGCTCAAAGA AGCTGGGGTC GGAAAAATCG AATTTTTGAA ATTTGAAAGC TGGAATCGTT        60
     TGCCCATTTT TTGCCCATGT TTGCCCACCA ATTAGTTTTT TTTGCCCACG TCCAGTTTTT       120
     GAGATATGGA TTTTCGAAAA AGTTCGAAAA TGTTCGAAAA TCAAAAATTT CGCTTTTTTC       180
     AAATTTTTTT TTTTTTAAAT CGCAATAACA TCGTTTGCCC ACGTTTGCCC ACCCTTTAGA       240
     ATTTTGAAAA AATTTATACT TTAGAAAATA TAAGGCTTTT AAGTTTACCT CGGTCTAATC       300
     AGAGAGTAAA TCGTTTGCCC ATCTCTTAAA ACCAAATATT ATCAACAAAA AACGTTTGCC       360
     CAACCATTAT TATTAGTTTT TATCGTTTGC CCACCCTTTA AAAAACCTTT AACAAAATTT       420
     TTTTTTCGAT TGCCCACACT TGAAATACAA CCAATTTCGT TAGCCCACCT CTTCAAAATA       480
     AATATTTCCA ATAAAAAACG TTTTCCCACC ATTTAAAAAT AAATAATTTC GATTGCCCAT       540
     CCTTCAAAAT TCATTTTAAC GTTTGCCCAC CCTTTAAAAT TTGTTTTTTT CGTTTGCCCA       600
     CTCTTAAAAC TAAATAATTT CGATTGCCCA CCTTTTAAAA CTAAATAATT TCGTTTGCCC       660
     ATCCTTTAAA ATTCATTTTT AACGTTTGCC CACCCTTTAA AAATAAATTA TTTCGTTTGC       720
     CCACCCTTTA AAATTTGTTT TTTTCGTTTG CCCACTCTTA AAACTAAATA ATTTCGATTG       780
     CCCACCTTTT AAAACTAAAT AATTTCGTTT GCCCATCCTT TAAAATTCAT TTTAACGTTT       840
     GCCCACCCTT TAAAAATAAA TTATTTCGTT TGCCCACCCT TTAAAAGTTT TTTTTTTTCG       900
     TTTGCCCACT CTTAAAACTA AATAATTTCG ATTGCCCACC TTTTAAAACT AAATAATTTC       960
     GTTTGCCCAT CCTTTAAAAT TCATTTTTAA CGTTTGCCCA CCCTTTAAAA TTTGTTTTGT      1020
     AAGATGTGGC GCCAATTCAG ATATTTTAGG ATCGGCGGAT AGAAGCACTT ACTTATATGA      1080
     TGATGATGAA CATACATAGA CATAAT                                           1106
//
ID   DMREPG     standard; DNA; INV; 4346 BP.
XX
AC   X06950;
XX
DR   FLYBASE; FBgn0001100; G-element.
XX
FT   source          X06950:1..4346
FT   SO_feature      CDS ; SO:0000316:220..951
FT                   /db_xref="FLYBASE:; G-element\ORF0"
FT   SO_feature      CDS ; SO:0000316:819..1539
FT                   /db_xref="FLYBASE:; G-element\ORF1"
FT   SO_feature      CDS ; SO:0000316:join(1530..1858,1866..1973,1982..2719,2727..3008,
FT                   3012..3800,3806..3991,4006..4095)
FT                   /db_xref="FLYBASE:; G-element\ORF2"
XX
CC   Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 4346 BP;  1215 A; 1356 C; 959 G; 816 T; 0 other;
     ACAGTCGCGA TCGAACACTC AACGAGTGCA GACGTGCCTA CGGACCGACG GCAAGTTATT        60
     TTCGTGCTCA AAGTCCCGCT ACTCTAAAAC CGCTACGTAG TGTCGCGAGA TTTCTTCGCG       120
     CACCGTGATT GGTTCAGCCG GCGAACCTTA CGGTATCGCT ACCACTACCA ACGCACTCGT       180
     GCGTGCGTGT TATCGGTATC AACAGTTACA TTCGGCTAAA GTTACTGCGA ACAACTCAGC       240
     AGCAGCCACG TGCTGAGGCT GGTACACCAA CAAACGGTTC CTACCGTGCC CTCCTCCCCT       300
     CCTTCCCTAC TCCGGGACAA CATGGACTGG CAAGCCCCCC CGCGACCCAC CAAGCTGACC       360
     AAAGTGCCTA GAAAGAAGGC GCTCAAAGAG GCGCCAGGAG AAGGTGAAAG CAGCTGCTCA       420
     AGCGATAGCA GCTCCTCGGA GTCAGAGCCT GGGGAAGTCA AGCGCAAAGC AGCGAGCAGA       480
     GACGCTAAGG AAGCCGCCGA CAACGTGCCC AACACCAGCG CAGCTCTGCG CAAGAAGCTG       540
     GAAAATAACT CCTTCGCCCT TCTGTCCAGC ACTGAGGACG AAGACGATGA CGACGACAAC       600
     ACCGACAACG AGCAGCAAAC CCCTGTTGGG GAATCTGCTC CAAAAACCAT GAAAAAACCC       660
     AACCCGACCC CGAAGACCAT CAAGCCACCC CCGATCTACA TCCCAGACGT GACCAACATC       720
     TCAGCCCTTG TCAGGATGAT TACGACTCTC GTCGGTGCCC ACAAGGAATT CTCGTACAAA       780
     ACTGAGAGAA ACAACAATGT ACGAGTAATG ATGCCTGACA AGGAATCCTA CTCAGCCTTT       840
     CGTCAGCAGC TTGTGACCCA GAACAAAAGG CACCGCACAT TTCAACTGTC AGGGACCTGC       900
     ACAACCCAAT TGGCAAAAAA TCAAAGGAAC CCCTGGGGAT CTTCTTTGTA AACCTGGAAC       960
     CTGCGAGCAA CAATACAGAC ATCTACAAAC TCAAGAGAAT CTGCAGGTCG GTCGTCACCG      1020
     TTGAGCCGCC TCTGAAATTC AACGATGTTC CGCAGTGCTT CAGATGTCAA GGGTTCGGAC      1080
     ACACCCAGCG CTACTGCTTT TTAGAGTTTC GCTGCGTCAA GTGTGGTGGC CTCCACGACT      1140
     CCAGGGCGTG TGAAAAAAAG GAAGACGAGA AAGCATGCTG CCTACACTGT CAAGCCGACC      1200
     ATCCAGCGTC GTTCAAAGGG TGCCCCGCGT ATAAGAAGGC AAAGGCTCAA CAAGCTCCTA      1260
     AACCCAAAGC AAGGAGCATG GAAAGCAACA ACAAGCCCTC CTTTGAGCTC CCAAATATTA      1320
     CAAACGGTAT GAGCTATAGA GACGCGCTAA GTGGCACACG CAAGTCCCAA GCAAGCACTC      1380
     CCCCACCGAC ACCCCCAACC CCACCTGAAG CCCCACAACC TAACCACATG GAGGCTATGT      1440
     TCACTCGATT TGAGAGCCTG GTCGAAAGAA TGATGGAGAA GATGTTTGCT CAGGTGACGC      1500
     AGCTTGTTGC TTCCATCCTC AACAGCAAGT CATGCAAATA AGTCTCAACA TAGTCTTCTG      1560
     GAACGCGAAC GGCTTGCAGA GAAGCAAAGC CGAAGTTGAG CACACCATCA AAACCGACAA      1620
     CATCGATATT TTATTGGTCT CAGAATCCCA TTTTTGCCCC AGATCCCACT TCATCATCTC      1680
     CGGTTACGAC CTCATCACAG CCAACCACCC ATCAGGTAGA GCTCGAGGAG GAGCGGCCAT      1740
     GCTCATCAAA AGCGGCATAC AGTTCACTGA ACTGCCTGCG ATACAGGAGG ATTGGGCACA      1800
     GTGTGCAGTG GCCAGAGTCA ATAGCCTACA GGGAGATATT ACGGTTGGAG CGGTTTACTT      1860
     CCACCCCCAG GCACGCGATT ACAGAGACTC ACCTGCATGA GTTCTTCGAG TCCCTCGGAA      1920
     CTCGCTTCAT TGCAGCCGGA GACTTCAATG CAAAGCACTC CTGGTGGGGG TCCGCACAAA      1980
     CAACCCCAAA GGCAAAACGC TCCACAAGTA CCTGATGCGC AAAAACTTGG ACTGCCACTC      2040
     TACTGGAGAG CCCACACACT GGCCCTCGGA CCCTTCTAAG CAGCCGGATC TGCTGGACAT      2100
     CGCGATCTGC AAAGGCATAG GTCGTGCCAA ACTCGTCTGC ACTACATACG ACAGGCTCGT      2160
     ATCGGACCAC AGCGCCGTCA ACCTGCTCCT CAACATCCCT GTCCTCAGGA AGACGCCGCT      2220
     CCGTAGACTC ACGGGGAATC GCACCAATGC CCCCAAGTTC ACGTTCTGGA TGCTCTCCTC      2280
     CCTAAACCCA GACCCAGACC TCTCCACTCC AGGCAATATA GGCGCGGCCA TCGAAAAACT      2340
     GAACAAGGAG ATGCACAACG CCGCTGAGTT TGCGAACCCT CCTCCTCCTA CAACCCCGAG      2400
     AACTCCCGCA AGAGACCTGC ATTTGTGGTC CCCAGAAATC GCCGCCCTCG TGGCCGAGAA      2460
     GAGACGCCTC AGACGAGTAT GGTTCCTCTC GCGTAACCCC AGGGACAAGA CAGCGCTCAA      2520
     TCGCGCCTCC AAGGAACTCA AGGACAAACT AACCACCCTA CGCCAAGACT CGTTTCAACG      2580
     ATTCCTTGAA GATCTGGAAC CTGGAGACCC GCAGCACAAC CTGTGGATCG TCACGCGGCA      2640
     CATCAAAAGA CCCGCCAAGA AAATGGTACC AGTGCGTACA GCAGACTGCT CCTGGTGTCG      2700
     GTCTGAGGCA GAAAGAGCCG AAGCTTGCTG ACCACCTTCG CTCTGCCTTC ACTCCGTTTG      2760
     ACCGATGCAC AGCTGCAGAG CAAGCTGACA CCATCAGAGC TGTTGAAAGC CCATGTGCTC      2820
     CAGGACCTGC AATTCAGCCC GTCGCACCAG AGGAGATCGC GCAGGAAATT GCCTCGCTCA      2880
     GAAACGGCAA GTCTCCCGGC CCTGATCGCA TCGACGCTAC TGCGTTAAAA ATGTTGCCCA      2940
     CATTCTGCTC ACAGCTGCTT GCCAACATTT TTAACAGCTG CTTCCGGCTA GGGTATTTCC      3000
     CAAAACAATA GAAACGCGCC GAAGTGATTA CCATCCCCAA GCCCGGCAAA CCTGAAGCCA      3060
     ATCTTGCCTC CTATCGTCCG ATAAGTCTGC TGGCAATCCT CTCCAAAATA CTCGAAAGAG      3120
     TATTTCTGCG CAGAGTGCTG CCAGTACTGG ATGAGGCTGG TTTGATCCCC GATCACCAGT      3180
     TTGGCTTCAG GCGCTCCCAC GGAACACCAG AGCAATGCCA CCGGCTTGTA GAGCAAATTT      3240
     TGGAGGCCTT CGAAAGGAAG CAATACTGCT GCGCCGTCAT GCTGGATGTG AAGCAGGCCT      3300
     TCGACAAAGT CTGGCACCCT GGACTCCACT ATAAAATCAA GACTCACCTT CCCGGATCCC      3360
     ACTTCGCCTT CCTCAAATCA TTCACTGAGG GTAGAGAGTT CCAAGTTTGC TGCGGAACAG      3420
     CGACCAGCAC GCCTAGGCCG ATAAGAGCCG GAGTACCCCA AGGCAGCGTC CTTGGACCAA      3480
     TACTGTACAC ACTCTACACA GCAGACCTTC CTATCACACC CTCCCGGAGC CTAACAGTGG      3540
     CCACATATGC CGATGACACC GCCTTCCTAG CCTCCGCCTC AGACCCCCAA GAAGCATCAA      3600
     CCATCATTCT AAGCCAGCTG GATGCCCTCG ACCCATGGTT GAAACGATGG ACCATTGCCG      3660
     TGAACGCAGA CAAATCCTCC CAAACCACTT TCTCCCTGCG CAGAGGAGAC TGCCCCCCAG      3720
     TCACGCTCAA CGGGGAAACT ATTCCAACCT CAAGTTCCCC GAAATACCTT GGATTGACTC      3780
     TAGACCGGAG GCTCACTTGG CACACCAGGC TGACCTGCGC CTCAAGCAAC TCCACTGGCT      3840
     CATCGGGAAA AGGTCCAAAC TTAGGGAAAA CCTTAAACTC CTCCTGTACA AGGCCATCCT      3900
     GAAGCCAATT TGGACTTATG GGATTCAGCT GTGGGGCACT GCCAGCATCT CAAACCGCAA      3960
     CCGCATACAG CGCTTCCAGA ACAAGTGCCT GAGTCAATCG CTGACGCTCA CCCATACCAT      4020
     GAAAACTCCG TTATCCACAA GGAGCTTGGA ATGCCATGGG TAGCAGAGGA GATCTCCCGC      4080
     TTCAGCGAGA GATACGCTAA ACGACTGGAC AACCACCCTA ACCATCTGGC TATTAACCTC      4140
     CTGGACAACA GTGAAACCAT CAGACGCCTC CAGAGGAAAC ACCCGCTTGA TCTCCACCAC      4200
     CTATAACCCA CAACAATGAA CCCCCGACCA ATCTACAACT TTGTAATCCC TTAAGTTAAT      4260
     GCCCCCCCCA CCCAAACATT TAATTATTGT CCACATGGAC AGATTTTAAA TTAATACATA      4320
     GATCGCTAAA AAAAAAAAAA AAAAAA                                           4346
//
ID   DMGYPF1A   standard; DNA; INV; 7469 BP.
XX
AC   M12927;
XX
DR   FLYBASE; FBgn0001167; gypsy.
XX
SY   synonym: mdg4
XX
FT   source          M12927:1..7469
FT   SO_feature      five_prime_LTR ; SO:0000425:1..482
FT   SO_feature      three_prime_LTR ; SO:0000426:6841..7411
FT   SO_feature      polyA_site ; SO:0000553:7277..7280
FT   SO_feature      primer_binding_site ; SO:0005850:482..492
FT                   /bound_moiety="tRNA:lys2"
FT   SO_feature      CDS ; SO:0000316:1080..2435
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0014965; gypsy\gag"
FT                   /db_xref="SWISS-PROT:P10405"
FT                   /protein_id="AAA70218.1"
FT                   /translation="MSWAHNYRKVKVEYESEDSWEEEQVGQALGRPLDSATVDITMDPN
FT                   QIQALIDNAVRQALSQQQSQFQTQLNSLAARVQSLQVEAPQIKIYEKVSVNPDVRCDIP
FT                   LDIIKSVPEFSGTQDEYVAWRQSAIYAYELFKPYNGSSAHYQAVAILRNKIRGAAGALL
FT                   VSHNTVLNFDAILARLDCTYSDKTSLRLLRQGLEMVRQGDLPLMQYYDEVEKKLTLVTN
FT                   KIVMTHEQEGADLLNAEVRADALHAFISGLKKALRAVVFPAQPKDLPSALALAREAEAS
FT                   IERSMFANSYAKAVEERAHSGANGKSRFQGKPNKEEQGQDRNPHFTKRPKNNGQTNKDT
FT                   QAQAPQPMEVDSSSRFRQRTEHYQNHPNESNAFKRRNSSERSTGPRRQRLNNVVQEAPK
FT                   QKDPKEEYEKTAKAAVEEIDSENEYAPSDDSLNFLGGAPGCRSLNDGWLGEP"
FT   SO_feature      CDS ; SO:0000316:2438..5470
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0014966; gypsy\pol"
FT                   /db_xref="SWISS-PROT:P10401"
FT                   /protein_id="AAA70219.1"
FT                   /translation="MLIDTDAAKNYIRPVKELKNVMPVASPFSVSSIHGSTEIKHKCLM
FT                   KVFKHISPFFLLDSLNAFDAIIGLDLLTQAGVKLNLAEDSLEYQGIAEKLHYFSCPSVN
FT                   FTDVNDIVVPDSVKKEFKDTIIRRKKAFSTTNEALPFNTAVTATIRTVDNEPVYSRAYP
FT                   TLMGVSDFVNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLN
FT                   EKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEF
FT                   CRLPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLI
FT                   DANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLA
FT                   SYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILASED
FT                   VILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQPEQNYATNERELLAIV
FT                   WALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKE
FT                   NFVADALSRQNLNALQNEPQSDAATIHSELSLTYTVETTDKPLNCFRNQIILEAARFPL
FT                   KRNLVLFRSKSRHLISFTDKSWLLKTLKEVVNPDVVNAIHCDLPTLASFQHDLIAHFPA
FT                   TQFRHCKNVVLDITDKNEQIEIVTAEHNRAHRAAQENIKQVLRDYYFPKMGSLAKEVVA
FT                   NCRVCTQAKYDRHPKKQELGETPIPSYTGEMVHIDIFSTDRKLFLTCIDKFSKYAIVQP
FT                   VVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSMLKNSFGIDIVNAPPLHS
FT                   SSNGQVERFHSTLAEIARCLKLDKKTNDTVELILRATIEYNKTVHSVTRERPIEVVHPG
FT                   AHERCLEIKARLVKAQQDSIGRNNPSRQNRVFEVGERVFVKNNKRLGNKLTPLCTEQKV
FT                   QADLGTSVLIKGRVVHKDNLK"
FT   SO_feature      CDS ; SO:0000316:join(567..568,5551..7000)
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0014964; gypsy\env"
FT                   /translation="
FT                   MFTLMMFIPLVVANARITDFSHANYIPVLDGDVLVFEQRDLLKHSSNLSE
FT                   YASMIDETQKLSESFPHSHMRKLLEVDTDHLRTLLSVLKVHHRIARSLDF
FT                   LGTALKVVAGTPDATDLFKIKITEAQLVESNSRQIAINSETQKQINKLTD
FT                   TINKVINARKGDLVDTPHLYEALLARNRMLSTEIQNLILTITLVKSNIIN
FT                   PTILDHADLKPLVEQDTPIVSLIEASKIRVLQSENSIHILIAYPRVKFSC
FT                   KKVAVYPVSHQHTILRLDEDTLAECEHDTFAVTGCTDTTHFTFCERSRRE
FT                   TCVRSLHAGNAAQCHTQPSHLREINPVDDGVVIINEAAAHVSTDGSPETL
FT                   IEGTYLVTFERTATINGSEFVNLRKTLSKQPGIVRSPLLNIVGHDPVLSI
FT                   PLLHRMSNENLHSIQNLMDDVESEGSPRLWFVAGVVLNFGLIGSLALYLA
FT                   LRRRRASREIQRTIDTFNMTEDGHKLEGGVVNN"
XX
CC   Derived from M12927 (g157583) (Rel. 44, Last updated, Version 6).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
CC   [See also:AF033821; alignments in /alignments/gypsy]
XX
SQ   Sequence 7469 BP;  2301 A; 1808 C; 1602 G; 1758 T; 0 other;
     AGTTAACAAC TAACAATGTA TTGCTTCGTA GCAACTAAGT AGCTTTGTAT GAACAATGCT        60
     GACGCGCCAG AATTGGGTTC AACGCTCCAC GCGAAGAATG CCTGGCAGCG GAAAGCTGAC       120
     ACTTCCTACC GGGAGTGTTG CTTCACGCTG CAAGAAATGC TGAGTCGGCT TGCCGACTTG       180
     TGGCGGCGCG ATGCATTGCT CGAGGGTAAA CTTAGTTTTC AATATTGTCT TCTACTCAGT       240
     TCAAATCTTG TGTCGAAATA AACCACAGCT TGCTCCGGCT CATTGCCGTT AAACATCATT       300
     GTTCTTATTT ACAATCAAAT CGCTATCGCC ACAAGGCTAG TGATAATAAC TAAGGGGGCG       360
     AAGTCAAGCC CTCCAACCTA ATCTCCATAA ACAGTGTCTA AGACGAACCT CAGCGAAAGA       420
     AGGAAGATCT CTAGACCTAC TGGAAATAAC ATAACTCTGG ACCTATTGGA ACTTATATAA       480
     TTGGCGCCCA ACCAACAATC TGAACCCACC AATCTAATTT AACACACTTT GTCAGGCGAC       540
     AAACAGGGTA GTTAAGTTAG AAAAGCATGT AAGTTTTACA AGACACTTCT TTGACGCAAT       600
     CAAGAAATTT ACGAGTGAAA AAAAAAAAAA AAAAAAGTTG TGTATCTGGC CACGTAATAA       660
     GTGTGCGTTG AATTTATTCG CAAAAACATT GCATATTTTC GGCAAAGTAA AATTTTGTTG       720
     CATACCTTAT CAAAAAATAA GTGCTGCATA CTTTTTAGAG AAACCAAATA ATTTTTTATT       780
     GCATACCCGT TTTTAATAAA ATACATTGCA TACCCTCTTT TAATAAAAAA TATTGCATAC       840
     TTTGACGAAA CAAATTTTCG TTGCATACCC AATAAAAGAT TATTATATTG CATACCCGTT       900
     TTTAATAAAA TACATTGCAT ACCCTCTTTT AATAAAAAAT ATTGCATACG TTGACGAAAC       960
     AAATTTTCGT TGCATACCCA ATAAAAGATT ATTATATTGC ATACCTTTTC TTGCCATACC      1020
     ATTTAGCCGA TCAATTGTGC TCGGCAACAG TATATTTGTG GTGTGCCAAC CAACAACCAA      1080
     TGAGTTGGGC ACATAACTAC AGAAAGGTTA AGGTCGAATA CGAAAGCGAG GATAGCTGGG      1140
     AGGAGGAGCA AGTAGGCCAA GCATTAGGTC GGCCGTTAGA TAGTGCCACG GTAGATATTA      1200
     CCATGGACCC CAATCAGATT CAAGCTCTTA TCGACAATGC TGTCAGACAG GCATTGTCGC      1260
     AACAGCAATC CCAATTTCAG ACACAACTCA ATTCCCTAGC TGCGCGGGTA CAGAGTTTGC      1320
     AGGTGGAAGC ACCGCAAATC AAGATTTACG AAAAAGTCTC TGTTAACCCC GATGTTAGGT      1380
     GCGACATTCC CCTTGACATA ATAAAGTCTG TACCAGAGTT CTCCGGTACC CAAGACGAGT      1440
     ATGTGGCCTG GAGACAATCG GCCATATACG CCTACGAGCT CTTCAAACCA TACAATGGCA      1500
     GCAGTGCCCA TTATCAGGCT GTTGCCATAT TAAGGAATAA AATCCGTGGC GCAGCCGGGG      1560
     CTTTACTGGT CTCCCACAAT ACGGTATTGA ACTTCGATGC TATTTTGGCC AGACTAGACT      1620
     GCACGTACTC GGACAAAACA TCCTTACGCC TGTTGAGGCA AGGATTGGAA ATGGTTAGGC      1680
     AAGGAGACCT ACCACTAATG CAATACTACG ATGAAGTTGA AAAGAAGCTA ACGCTTGTCA      1740
     CTAACAAAAT CGTAATGACG CATGAACAAG AGGGTGCTGA CCTGCTTAAC GCTGAGGTCA      1800
     GAGCCGACGC CCTGCATGCT TTTATTTCGG GGCTCAAAAA GGCCCTCAGA GCTGTGGTCT      1860
     TCCCGGCCCA ACCAAAAGAC CTGCCATCTG CACTGGCTTT AGCTAGAGAA GCAGAGGCAA      1920
     GCATAGAGAG AAGCATGTTC GCTAACTCCT ACGCCAAGGC CGTAGAGGAG CGAGCGCATT      1980
     CGGGGGCAAA CGGCAAGAGC CGTTTCCAGG GGAAGCCAAA TAAAGAAGAA CAGGGACAGG      2040
     ACAGGAATCC CCACTTCACC AAACGCCCCA AAAATAACGG ACAAACCAAC AAGGACACTC      2100
     AGGCGCAAGC ACCCCAGCCA ATGGAGGTCG ATTCATCCTC CAGGTTTAGG CAGCGTACTG      2160
     AACATTATCA GAATCATCCT AACGAGTCGA ACGCGTTTAA GAGGAGAAAT TCCTCAGAAC      2220
     GCTCAACAGG ACCGAGACGA CAACGTCTGA ATAACGTTGT CCAAGAGGCC CCTAAACAAA      2280
     AGGACCCCAA AGAAGAGTAT GAAAAAACAG CAAAGGCTGC AGTCGAGGAA ATCGACAGCG      2340
     AAAATGAGTA CGCTCCCAGT GACGACTCGT TGAATTTTTT AGGGGGCGCT CCCGGTTGCC      2400
     GTTCATTGAA CGACGGCTGG CTGGGAGAAC CTTAAAGATG CTAATCGATA CCGACGCGGC      2460
     AAAAAACTAC ATTAGGCCCG TAAAGGAGCT GAAAAATGTA ATGCCGGTCG CCAGCCCTTT      2520
     CTCGGTGAGC TCAATACACG GCTCCACCGA AATCAAACAC AAATGCTTGA TGAAAGTCTT      2580
     CAAGCACATC TCCCCATTTT TTCTTTTGGA TTCTCTCAAT GCGTTCGACG CTATCATAGG      2640
     CTTGGACCTG TTAACACAGG CCGGGGTAAA ACTCAACCTT GCAGAGGACT CCTTAGAATA      2700
     CCAGGGCATC GCTGAAAAGC TTCATTATTT CAGCTGCCCC AGTGTAAATT TCACTGATGT      2760
     AAACGATATT GTTGTACCTG ACTCCGTTAA AAAGGAGTTC AAGGACACAA TAATAAGGAG      2820
     GAAGAAAGCT TTCTCCACAA CAAATGAAGC TCTTCCTTTT AACACCGCTG TCACTGCCAC      2880
     AATTCGGACA GTTGACAATG AACCGGTGTA CTCAAGAGCG TACCCAACTC TTATGGGTGT      2940
     CTCCGACTTT GTGAACAACG AGGTCAAACA ACTGCTGAAA GACGGCATTA TCAGGCCCTC      3000
     AAGGTCTCCC TATAACAGCC CGACCTGGGT TGTTGACAAA AAGGGGACCG ACGCCTTCGG      3060
     GAACCCAAAC AAGAGGTTGG TCATTGACTT CAGGAAGCTA AATGAGAAAA CTATTCCTGA      3120
     CCGGTACCCG ATGCCTAGCA TTCCCATGAT TCTAGCGAAT CTGGGCAAGG CAAAGTTCTT      3180
     CACTACCCTT GATCTTAAGT CAGGGTATCA TCAAATTTAC CTCGCGGAAC ACGACCGCGA      3240
     GAAGACATCG TTCTCGGTGA ATGGTGGTAA ATACGAGTTT TGCCGTCTAC CGTTCGGCTT      3300
     GAGAAATGCA AGCAGCATTT TTCAAAGAGC CCTAGACGAT GTGCTTAGAG AGCAAATCGG      3360
     GAAGATATGT TACGTCTATG TAGATGACGT CATAATTTTC TCTGAAAACG AGTCCGACCA      3420
     TGTCCGCCAC ATCGATACAG TACTAAAATG CCTGATCGAT GCCAACATGA GAGTAAGCCA      3480
     GGAGAAAACT AGATTCTTTA AAGAGAGTGT AGAATACCTC GGCTTTATTG TCAGTAAGGA      3540
     CGGAACTAAA TCCGATCCAG AGAAGGTGAA GGCCATTCAG GAGTACCCTG AACCAGACTG      3600
     CGTTTACAAG GTTAGGTCCT TCCTTGGTTT AGCCAGCTAC TACAGAGTCT TCATCAAAGA      3660
     CTTTGCTGCC ATAGCCCGCC CGATCACCGA TATCCTAAAA GGGGAAAATG GTTCGGTGAG      3720
     CAAACACATG TCTAAAAAAA TTCCTGTTGA GTTTAATGAA ACTCAACGCA ACGCGTTCCA      3780
     AAGACTGCGA AACATACTAG CATCCGAGGA TGTCATACTC AAATACCCCG ACTTTAAAAA      3840
     GCCTTTTGAC CTTACTACAG ATGCTTCGGC AAGTGGTATC GGTGCAGTCC TATCCCAGGA      3900
     GGGCAGGCCA ATCACCATGA TATCGCGTAC CCTTAAACAG CCCGAGCAGA ACTACGCCAC      3960
     AAACGAAAGG GAATTGCTGG CGATTGTATG GGCCCTAGGT AAGTTGCAGA ACTTCCTGTA      4020
     TGGCTCTAGG GAGATTAATA TATTTACCGA CCATCAACCC CTCACTTTCG CTGTTGCCGA      4080
     CAGGAACACG AATGCCAAGA TAAAGAGGTG GAAATCTTAC ATAGACCAGC ATAATGCCAA      4140
     GGTTTTCTAC AAACCTGGCA AAGAAAATTT CGTGGCAGAC GCCCTCTCTA GGCAGAATCT      4200
     GAATGCCTTA CAAAACGAAC CCCAATCAGA CGCTGCGACC ATTCACAGTG AGCTCTCCCT      4260
     GACCTACACG GTCGAGACAA CAGACAAACC GTTAAATTGC TTCAGGAACC AGATCATTCT      4320
     GGAGGCAGCA CGTTTTCCGC TCAAACGAAA CCTGGTGCTC TTTCGAAGCA AATCTCGCCA      4380
     CTTAATCAGC TTTACTGATA AAAGTTGGCT ATTAAAAACA CTTAAGGAGG TGGTAAACCC      4440
     TGACGTCGTG AACGCTATTC ACTGCGACCT GCCCACTCTG GCAAGCTTCC AACACGACCT      4500
     CATTGCCCAC TTTCCAGCCA CCCAATTTCG TCACTGTAAG AATGTCGTGT TAGACATAAC      4560
     CGACAAAAAC GAACAGATCG AAATCGTCAC TGCCGAGCAC AACCGCGCTC ACAGAGCCGC      4620
     ACAAGAAAAC ATTAAACAAG TCCTTCGGGA TTATTACTTT CCCAAAATGG GCAGTTTAGC      4680
     TAAAGAAGTA GTAGCTAATT GTAGGGTCTG CACCCAAGCA AAGTATGACA GGCACCCGAA      4740
     AAAGCAAGAG CTCGGGGAAA CGCCCATACC CAGCTATACA GGTGAGATGG TGCATATTGA      4800
     CATATTCTCA ACCGACAGGA AGCTATTCCT GACGTGTATT GACAAATTTT CTAAATATGC      4860
     AATAGTGCAA CCAGTGGTGT CTAGAACAAT AGTGGACATC ACAGCACCCC TGTTGCAGAT      4920
     CATTAACCTG TTCCCCAATA TCAAAACGGT CTATTGTGAC AATGAGCCCG CATTTAACTC      4980
     AGAAACTGTC ACCTCAATGC TCAAGAACAG CTTCGGCATT GACATAGTAA ATGCGCCCCC      5040
     ACTCCACAGC TCATCCAATG GCCAAGTTGA ACGGTTCCAC AGCACATTGG CAGAAATCGC      5100
     CAGGTGCCTG AAGTTGGACA AAAAAACGAA TGACACAGTA GAACTAATCT TGAGGGCGAC      5160
     GATAGAATAT AACAAAACCG TGCACTCAGT TACTCGTGAG AGACCAATTG AGGTGGTTCA      5220
     CCCAGGGGCC CACGAGCGCT GCCTAGAAAT CAAGGCAAGA TTAGTAAAGG CTCAGCAAGA      5280
     CAGCATCGGA AGAAACAACC CTTCCCGACA AAACCGCGTG TTTGAGGTGG GAGAACGCGT      5340
     GTTTGTAAAA AACAACAAGA GGTTAGGAAA TAAGCTAACT CCACTATGCA CCGAGCAAAA      5400
     AGTGCAGGCA GACTTGGGAA CGTCTGTTCT TATTAAGGGG AGGGTGGTCC ACAAGGACAA      5460
     CCTCAAGTAG ACATTCCCTC TACAGTTAGG TAGTAAGTTA TGTCAAGGAA AATCCGAGCA      5520
     CTGTAGTATC ACCTTGTCTT TAATTTCCAG GTTCACCCTC ATGATGTTCA TACCCTTGGT      5580
     AGTAGCGAAT GCTCGGATCA CCGACTTTTC GCATGCCAAC TACATTCCTG TGTTAGATGG      5640
     GGATGTGCTG GTGTTTGAAC AGCGTGACCT CTTGAAACAT TCGAGTAACC TTTCCGAGTA      5700
     CGCTAGTATG ATAGATGAAA CACAGAAACT GTCCGAGTCC TTTCCCCACT CACATATGCG      5760
     TAAGTTGCTA GAGGTCGATA CTGACCATCT TAGAACCTTG TTGTCCGTTC TCAAAGTCCA      5820
     CCATAGGATA GCTAGGAGTC TAGATTTCTT AGGTACAGCC TTAAAGGTTG TGGCGGGTAC      5880
     TCCCGATGCC ACGGACCTCT TTAAAATTAA GATCACAGAG GCCCAACTAG TAGAATCTAA      5940
     TTCCAGGCAG ATAGCTATAA ACTCCGAAAC CCAGAAACAG ATAAATAAGT TAACTGACAC      6000
     CATCAATAAG GTGATCAATG CCCGTAAAGG CGACTTGGTT GACACTCCAC ACTTATATGA      6060
     AGCACTACTA GCAAGAAATA GGATGCTGTC TACAGAAATT CAAAATTTAA TTCTCACTAT      6120
     TACTTTGGTC AAATCAAACA TTATAAATCC CACAATTCTT GATCATGCCG ACTTGAAGCC      6180
     TCTTGTAGAA CAGGATACCC CAATTGTCAG CTTAATAGAA GCATCTAAGA TCAGGGTCCT      6240
     CCAGTCCGAG AATAGCATTC ATATTTTAAT TGCCTATCCT AGAGTCAAGT TCAGTTGCAA      6300
     GAAAGTCGCC GTCTACCCTG TATCTCACCA ACACACCATC TTGCGCCTCG ACGAAGACAC      6360
     TTTGGCCGAA TGCGAACATG ACACCTTTGC GGTCACCGGA TGCACAGACA CCACACACTT      6420
     CACGTTCTGC GAGCGGTCTC GGCGCGAAAC TTGCGTGCGC TCACTCCATG CTGGAAACGC      6480
     TGCTCAATGC CACACTCAAC CCAGCCACTT GCGAGAAATA AACCCCGTAG ATGATGGCGT      6540
     TGTGATTATC AACGAAGCCG CAGCTCACGT TAGCACTGAT GGCAGCCCCG AAACACTGAT      6600
     AGAGGGAACC TACCTGGTAA CCTTCGAGCG AACGGCAACC ATCAACGGCT CTGAATTCGT      6660
     AAATCTAAGG AAAACACTAA GCAAGCAGCC AGGCATCGTG CGTTCACCAC TACTTAACAT      6720
     CGTCGGCCAC GACCCTGTGC TCAGTATACC TCTGCTACAC CGGATGAGTA ACGAAAACCT      6780
     ACATTCCATC CAAAACCTTA TGGATGACGT GGAATCTGAA GGCTCGCCCA GACTCTGGTT      6840
     CGTGGCTGGT GTGGTCCTAA ACTTCGGCTT GATTGGCTCT CTCGCCCTTT ATCTGGCATT      6900
     AAGGAGAAGA CGAGCCTCTA GGGAGATACA GCGCACCATC GATACTTTCA ACATGACCGA      6960
     GGACGGTCAT AAACTTGAGG GGGGAGTAGT TAACAACTAA CAATGTATTG CTTCGTAGCA      7020
     ACTAAGTAGC TTTGTATGAA CAATGCTGAC GCGCCAGAAT TGGGTTCAAC GCTCCACGCG      7080
     AAGAATGCCT GGCAGCGGAA AGCTGACACT TCCTACCGGG AGTGTTGCTT CACGCTGCAA      7140
     GAAATGCTGA GTCGGCTTGC CGACTTGTGG CGGCGCGATG CATTGCTCGA GGGTAAACTT      7200
     AGTTTTCAAT ATTGTCTTCT ACTCAGTTCA AATCTTGTGT CGAAATAAAC CACAGCTTGC      7260
     TCCGGCTCAT TGCCGTTAAA CATCATTGTT CTTATTTACA ATCAAATCGC TATCGCCACA      7320
     AGGCTAGTGA TAATAACTAA GGGGGCGAAG TCAAGCCCTC CAACCTAATC TCCATAAACA      7380
     GTGTCTAAGA CGAACCTCAG CGAAAGAAGG AAGATCTCTA GACCTACTGG AAATAACATA      7440
     ACTCTGGACC TATTGGAACT TATATAATT                                        7469
//
ID   DMHFL1     standard; DNA; INV; 2959 BP.
XX
AC   M69216;
XX
DR   FLYBASE; FBgn0001210; hobo.
XX
SY   synonym: H-element
XX
XX
FT   source          M69216:1..2959
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..12
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:2948..2959
FT   SO_feature      TATA_box ; SO:0000174:107..112
FT   SO_feature      polyA_signal_sequence ; SO:0000551:2382..2394
FT   SO_feature      CDS ; SO:0000316:316..2292
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0014191; hobo\T"
FT                   /translation="
FT                   MAPYIMIVEFLCLWSSVSAVNCPFFVFYDAITSLLGFSIIWKPKEKVTIM
FT                   AEAADFVKNKINNGTYSVANKHKGKSVIWSILCDILKEDETVLDGWLFCR
FT                   QCQKVLKFLHKNTSNLSRHKCCLTLRRPTELKIVSENDKKVAIEKCTQWV
FT                   VQDCRPFSAVTGAGFKNLVKFFLQIGAIYGEQVDVDDLLPDPTTLSRKAK
FT                   SDAEEKRSLISSEIKKAVDSGRASATVDMWTDQYVQRNFLGITFHYEKEF
FT                   KLCDMILGLKSMNFQKSTAENILMKIKGLFSEFNVENIDNVKFVTDRGAN
FT                   IKKALEGNTRLNCSSHLLSNVLEKSFNEANELKKIVKSCKKIVKYCKKSN
FT                   LQHTLETTLKSACPTRWNSNYKMMKSILDNWRSVDKILGEADIHVDFNKS
FT                   SLKVVVDILGDFERIFKKLQTSSSPSICFVLPSISKILELCEPNILDLSA
FT                   AALLKERILENIRKIWMANLSIWHKAAFFLYPPAAHLQEEDILEIKVFCI
FT                   SQIQVPISYTLSLESTETPRTPETPETPESLESPNLFPKKNKTISSENEF
FT                   FFPKLVTESNSNFNESPLDEIERYIRQRVPLSQNFEVIEWWKNNANLYPQ
FT                   LSKLALKLLSIPASSAAAERVFSLAGNIITEKRNRLCPKSVDSLLFLHSY
FT                   YKNLNNSQ"
XX
CC   Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
CC   CDS annotation from Lynn Crosby's annotation 'H-element.v004'.
XX
SQ   Sequence 2959 BP;  994 A; 541 C; 571 G; 853 T; 0 other;
     CAGAGAACTG CAAGGGTGGC ACTTTTTTAC CACTCGACTC ACACCCTACA ATTTTGTGTG        60
     CGGGTGCTAC TCGCCACGCA CATCGCGGGT ACTTACAAAC ACACAGTATA AATCTGAACA       120
     TGCAGACAAG ACACCCCGTT GTGTGCGCAC CCGAATCAAT ACGGTGTTTT GCGTCGCGGG       180
     TGCCGCTCAC ACAGTGCCTA AAAAGGGATG AGTGAGAAAA ACACTTGTGG GTATACCGTT       240
     AAACACATGG GTGTTTCCAA AAATACTCGG GTGTTTCCAA AAATACTCGA GTGGTCTCGT       300
     AGGTAGTCGA GTCAAATGGC GCCATACATA ATGATTGTTG AGTTCTTGTG TCTTTGGTCC       360
     AGTGTCTCGG CTGTTAATTG CCCCTTTTTT GTTTTTTACG ATGCAATTAC TAGCTTGTTA       420
     GGATTCAGTA TTATTTGGAA GCCAAAGGAA AAGGTCACAA TAATGGCAGA AGCGGCTGAT       480
     TTCGTTAAAA ATAAAATTAA CAATGGAACA TACTCAGTTG CCAATAAACA TAAAGGAAAA       540
     AGTGTTATTT GGAGCATTTT ATGTGACATT TTAAAGGAAG ATGAAACTGT TCTGGACGGA       600
     TGGCTGTTCT GCAGGCAATG CCAGAAAGTG CTCAAATTTT TACACAAAAA CACCTCCAAT       660
     TTATCCCGCC ATAAATGTTG TCTAACATTA AGACGACCAA CGGAATTAAA AATTGTTTCG       720
     GAAAACGACA AGAAAGTAGC TATTGAAAAA TGCACCCAAT GGGTTGTCCA AGATTGTCGG       780
     CCGTTTTCTG CAGTAACCGG AGCCGGATTT AAAAATTTGG TGAAGTTTTT CCTACAAATC       840
     GGCGCTATCT ATGGGGAACA GGTAGACGTC GATGACTTAC TACCTGATCC AACAACATTA       900
     AGTCGGAAGG CCAAATCGGA TGCAGAAGAG AAGAGGAGTC TAATCTCGTC CGAGATAAAA       960
     AAAGCTGTGG ATAGCGGAAG AGCAAGTGCG ACCGTCGACA TGTGGACTGA CCAGTATGTC      1020
     CAAAGAAACT TTTTGGGCAT CACTTTCCAT TACGAAAAAG AATTTAAACT TTGTGACATG      1080
     ATTTTGGGAC TAAAATCGAT GAATTTTCAA AAATCGACTG CCGAAAACAT TTTAATGAAA      1140
     ATTAAAGGTT TATTTTCGGA ATTCAATGTT GAGAACATTG ATAATGTTAA GTTTGTGACT      1200
     GACAGGGGAG CAAATATAAA AAAGGCTTTA GAGGGCAATA CCCGTTTAAA TTGTAGCAGT      1260
     CACCTGTTGT CAAATGTTTT AGAAAAATCG TTTAACGAGG CCAATGAACT CAAAAAAATT      1320
     GTGAAATCAT GCAAAAAAAT CGTGAAGTAC TGCAAAAAAT CAAATTTGCA GCATACTCTA      1380
     GAAACCACTT TGAAAAGCGC CTGTCCGACT AGATGGAACT CCAACTACAA AATGATGAAG      1440
     TCCATTCTGG ATAACTGGCG TAGTGTGGAT AAAATATTAG GTGAAGCTGA TATCCATGTA      1500
     GATTTTAATA AATCATCTTT AAAAGTTGTG GTAGATATTC TAGGAGACTT TGAACGAATA      1560
     TTTAAGAAGT TGCAAACATC TAGCTCACCA TCTATATGCT TCGTATTGCC ATCCATCTCT      1620
     AAAATTTTAG AATTATGCGA GCCGAATATT TTAGACCTTT CTGCAGCAGC ATTGCTTAAG      1680
     GAAAGAATTT TGGAAAATAT TCGTAAGATT TGGATGGCAA ATCTAAGCAT ATGGCATAAG      1740
     GCGGCATTTT TTTTATATCC ACCCGCAGCA CATCTTCAGG AAGAAGATAT TCTTGAAATA      1800
     AAGGTGTTTT GCATTTCACA AATTCAAGTC CCAATTTCAT ACACATTAAG CTTAGAATCT      1860
     ACAGAAACTC CAAGAACTCC AGAAACTCCA GAAACTCCAG AAAGTCTAGA AAGTCCAAAC      1920
     TTATTTCCAA AAAAAAACAA AACAATATCT TCTGAAAACG AATTCTTCTT CCCAAAGTTA      1980
     GTAACTGAGT CTAATTCCAA CTTCAATGAA TCTCCATTAG ATGAAATTGA ACGATATATT      2040
     AGACAAAGAG TTCCATTGTC TCAAAATTTT GAAGTAATTG AGTGGTGGAA AAATAACGCA      2100
     AACTTATACC CTCAGTTGTC AAAGTTAGCA TTAAAACTTT TATCAATACC AGCCAGTAGC      2160
     GCAGCAGCTG AAAGAGTGTT TTCCCTAGCA GGTAATATAA TAACAGAAAA GCGAAATAGA      2220
     TTATGCCCAA AATCTGTAGA TAGCCTCCTT TTTTTGCATT CCTATTACAA AAACCTAAAC      2280
     AACTCGCAAT AGATATTCCT TCTTATAAGT ATATTTTATA TTATTAATTC TTATTATTTG      2340
     CTTAATTTTT GTATAAGTGT TAAGTATTAA GTATAAGTAT TAATTAATAA TATATAAGAT      2400
     TGTTATTTGT TAAGACATTA GATGCAAAAT CCTAAAAATG TGAAAGTAAT GAAGTTCCTT      2460
     ATATTTAATA GATACTTTTT AAGCCCACTA TGTTTTTATT ATTTAGATTG AGACATTAAA      2520
     AAACGTAAAA ATCAACAAAT GCCGTCTTTA ATTGCAATTA CTTTATGTGT TTGAAATGGG      2580
     AGGCACCCAT TGAGTCCATC AAAGAGCAAA GACATGAGCA CAAAAATTTT CTTGGGTATT      2640
     CCCTTTTACC CTTCATTTCT TATACCCGTC ACGCTTCCAC CCATACAAAT TTTAGGCGTA      2700
     CAAAAAATGA CCAGAGAACT GCAGCCCGCA TACAAAAAAT GACCTGCGGC CGATCGTTGA      2760
     CTGTGCGTCC ACTCACCCAT ACGGCTCTTG CGCAGCAGGC CTCGGGTGGT TTTTTTACTC      2820
     GTAACAAAAA CACAACGTCG GTAAAACACT CGAGTATTTT GTGTTGCCGC AAGTAGGGTG      2880
     TCAAAAAAAA CGGGGTGCCT AGAGTACCGA GTGTTTATCG GGTGGACGTA GAGTGCGAGT      2940
     GGCGGGCTGC AGTTCTCTG                                                   2959
//
ID   DMTHB1     standard; DNA; INV; 1653 BP.
XX
AC   X01748;
XX
DR   FLYBASE; FBgn0001181; HB.
XX
FT   source          X01748:189..1841
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..31
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1622..1653
FT   SO_feature      CDS ; SO:0000316:387..534
FT                   /db_xref="FLYBASE:FBgn0044055; HB\T"
FT                   /db_xref="SPTREMBL:Q27293"
FT                   /protein_id="CAA25884.1"
FT                   /translation="MLILKLRKEGKTYKDIQKTLKCSAKMVSNAIKYKWKPENRGTKHK
FT                   TTDIEDRRIVSYSKVYRFASFRDIKSELNLGISDVTIRRRLLNQNFSARSPRKVPLPSP
FT                   RHIKARLSLAKTYLNWPVSKWRNILWTDGSKIMLFGGTGSLQYI"
XX
CC   Derived from X01748 (g8693) (Rel. 49, Last updated, Version 3).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 1653 BP;  568 A; 288 C; 302 G; 495 T; 0 other;
     ATGTACAGCT GTGTTCAGAA AAATAGCAGT GCGAAGGAAA CTAAGTAATA CAAAGGTATT        60
     TTTCCATGTC CCTTTTCGGA ATCGACTTTT TATTCCTCTT ATTTTTGTTA AATGGAATGT       120
     GTAGATAGGG AAAAAAAGAA AATCCGGTCA GTTTTTCTTG TTATCCTTTT TTTATTTACA       180
     TTCTTGAGCA AAATCACAAT TTTTAGGCTG TTCATAAGAA TAGCAGTGTC TGGTTCTGAC       240
     CAACGTAAAG TCCCGAAATG ATCAATATTT TCTAAAAAGT GAGTTTGGTT AAGTTAATTC       300
     GTATATTTAA AAGGACAATA AATTAAAAAA ATTAAAAAAA TTTTATTTTA GTGGGTAGAG       360
     GACAGCACTA CTCCCAGGGG AAAAGAATGT TAATTCTTAA GCTTAGAAAG GAAGGAAAAA       420
     CATATAAGGA CATTCAAAAA ACCCTTAAAT GTTCTGCCAA AATGGTATCC AATGCCATTA       480
     AATATAAATG GAAGCCCGAA AACCGTGGTA CCAAACATAA AACCACAGAT ATAGAGGATC       540
     GACGCATTGT TTCTTACAGC AAAGTCTATC GTTTTGCATC CTTTAGGGAC ATAAAGTCTG       600
     AGCTGAACTT GGGAATCAGC GACGTTACTA TTCGTAGACG ACTACTGAAT CAAAATTTCA       660
     GTGCGAGGAG TCCACGAAAG GTTCCCCTAC CTAGCCCAAG GCATATTAAG GCAAGGTTAA       720
     GCTTAGCTAA AACCTACCTA AACTGGCCAG TCTCCAAATG GCGTAATATC CTTTGGACTG       780
     ATGGGTCAAA AATCATGCTA TTTGGTGGAA CTGGTTCACT ACAGTATATC TGACGACCTC       840
     CAAACACGGA GTATCACCCA AAACACCCAG TGAAGACTTT CAATCACGGT GGACCTAAAA       900
     TCATGGTATG GGCTTGTTTT TTTTATAATG GTATGAGTCA TGCTATGGAT TATGATTTAT       960
     GGTATTATAG ACCAAAACGC ATATGTAAAT ATACTTAGTG ATGTCTTATT GTCATATTCT      1020
     GAATAAAATA TACCCTTAAA ATGGACATTC CAACAGGATA ATGATCAGAA ACGCAGATGT      1080
     AAATCGGCTA AGAATAGGTT CACCCAAAAT AGAATAGATG CAATGCCGTG GCAAGCACCA      1140
     CCTTCCCATT TAAACCCGAT TGAAAACCTG TATGGGGACA TTAAACAGTT TGTGTCGAAG      1200
     AAGTCCCCGA CGTCTAAGAC TCAGATTTGG CAAGTTGTGC AGGATACATG GGCAAAAATT      1260
     CCTCCCAAAC CTTGCTAGGA CTTGGTGGAC TTCATGCCGC GTGGGTGTAA GGCTGTGCTG      1320
     GCTAACAAAG GCTATCCAGC CAAGTATTAG GCCCGAATTA ACATATTAAA AAGAAAAACT      1380
     AAGTTCGTTC TAGGTCAAGT TAAATTTTGT TACTATTTTT TCATAGCACT GCTATTTTAT      1440
     TGAACACCAG AATTTCTGCC TATTTATTGT TTTAATCTAT ATTTTCGAAA CTATTGAAGA      1500
     AATAAAAGTG AAACATTTGT TAAATTGTTT GAAATGAAAT ACCTAATGAT ATTATTAAAA      1560
     AAAAATTCCC ATTAAAACTG TAAATCATAG GAATTTTTTA TCTTAAACTC TGAAGTCCAA      1620
     AGCACTGCTA TTATTCTGAA CACAGCTGTA CAT                                   1653
//
ID   DM06920    standard; DNA; INV; 6083 BP.
XX
AC   U06920;
XX
DR   FLYBASE; FBgn0004141; HeT-A.
XX
FT   source          U06920:1015..7097
FT   SO_feature      five_prime_UTR ; SO:0000204:1..731
FT   SO_feature      three_prime_UTR ; SO:0000205:3497..6083
FT   SO_feature      polyA_sequence ; SO:0000610:6077..6083
FT   SO_feature      CDS ; SO:0000316:732..3497
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0016662; HeT-A\gag"
FT                   /db_xref="REMTREMBL:AAC17188"
FT                   /protein_id="AAC17188.3"
FT                   /translation="MSMSDNLFSDDEVLSISSSPEQRSSPFYLNISPMSHGSDNSQINT
FT                   VIINSKKLPSNQADISLKNSSGAAIKIVNSLSHKKKENTNVNNAQKDPLSLTNTTASTC
FT                   GAKSSISEGKLSSPPSTSHTYEGKLLTKLTHTHTDFRGAKTSDAMGSFPSLSHSDNSIE
FT                   KNLSSSTKIGPNASSPPSHAHTHTSKSTDISLESRSKHPALANTDARSIKANANDNGEI
FT                   FSSLIQIDERKQEERPCTTINAFWSIFKPKPDVTKLSLKRKPTNPTKNTGKKCISPHKK
FT                   SAYLCPSAQDDLNLNLNPKSSAKPTVVNLPAARILSRPAAKRDLFKSSSSRSPDEQPMS
FT                   FSEVVAGTGSIFAAPCVPAPLTKTPGKRTNDDLDCSNFKTPNKKLCATSNFVTPSIFPP
FT                   LITPVFKSKAAQSVYEESKARNGPPPPALACSINASARSAAAPPGIAPLPPHNTDAELP
FT                   PWKIVPQSRRAPPILVNDVKEIVPLLEKLNYTAGVSSYTTRAIEGNGVRIQAKDMTAYN
FT                   KIKEVLVANGLPLFTNQPKSERGFRVIIRHLHHSTPCSWIVEELLKLGFQARFVRNMTN
FT                   PATGGPMRMFEVEIVMAKDGSHDKILSLKQIGGQRVDIERKNRTREPVQCYRCQGFRHA
FT                   KNSCMRPPRCMKCAGEHLSSCCTKPRTTPATCVNCSGQHISAYKGCPAYKAEKQKLAAN
FT                   NVDINKIRTIKDATNNFYKRQGPPLRNNTPRLPHSSAILSKSIAEARQEAARKSMLNPF
FT                   RQNINDRRPRFSSHDTAIQKRLNKWRRNTNKIPKKGRIALKDNAKPRPAHRTSNPAQRH
FT                   LEDYQDMLRRERSEENDQESEKGTPNTKQVGNDSPPTTSRAARASFKPRIIDDTTPSPK
FT                   ICNPNSQKGLLDDPTTSLANRVDNLEKKIDILMALIIQGRNNNLDMDTSN"
XX
CC   Derived from U06920.2 (Rel. 67, Last updated, Version 14).
CC   Michael Ashburner, 26-Jan-2002.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 6083 BP; 2199 A; 1545 C; 1033 G; 1306 T; 0 other;
     TAAATAAATA AAATAAATTA AACAATTAAC TAAATAATTA AATAACTAAA ATTAATAATA        60
     TAATCCGTTC GCTTGCCAAA GACTCTCACG CGCATAACTA ATTAAAATCG ATTTTCAAGT       120
     TGACAAATAA ATGGTTTAAA ATTGTCCTCA GGCTGCAAAG AAAAGCCGCG GCAACAATAA       180
     ACATTTAGTG ACACGCGAAA AGCGAACATT TGATTAGTGT AATACTTGTG CAAACCGACA       240
     AGCTGCCGCC ATAACAAAAC GGAGACGAAG AATCATAAAG AACAAAAGCT AAATCCACCA       300
     GCATAGCAAA AATAAATTAA CAAATAAAAT AAAAGCAAAT TTAAATAACA TAATAAATTA       360
     AACTTATTTA ATAAACCAAT TAATTTTAAT TAATTCAATT AAACGCTAAA TCTACATAAT       420
     ACTCCACGCG CAAATTAATT GAAATCGTCT TTCTAGTTAA TAAATTAAAA GTTTAAAAAT       480
     TGTCTCCGGC CGCAAAATTT GAACCGCGAC GATAAAAACA TTTAATTGAC AAACAAAAAG       540
     CGAACAATTA TTCAGTGAAC TATTTGTGCA AAATTGACAA GCAGACGCCA TAATTAAAAG       600
     GAGAAGAAGC CAAAAGACGA AGAGAAGAAA GCAACCAGAA GAACTCAAAG AAGAAAAGGA       660
     GGAAAGCCCA ATTAAAGAAA GCCAGGGTAT TTATACCTTA CACTTATCGT TTAATATAAC       720
     AAAAACCCAA CATGTCCATG TCCGACAACC TTTTTTCTGA CGATGAGGTA CTTTCAATTT       780
     CCTCAAGCCC AGAACAGCGA TCTTCTCCGT TCTACCTCAA TATATCGCCC ATGTCCCACG       840
     GATCAGACAA TTCTCAGATT AATACAGTCA TCATTAATTC GAAGAAATTG CCCTCAAATC       900
     AAGCAGACAT AAGTTTAAAA AACTCTTCTG GGGCTGCTAT AAAAATTGTT AATTCCCTTT       960
     CACACAAGAA GAAAGAGAAC ACAAACGTTA ATAATGCCCA AAAAGACCCC CTCTCACTCA      1020
     CCAATACTAC TGCAAGCACT TGTGGCGCCA AAAGCAGCAT CTCAGAGGGG AAATTGTCTT      1080
     CTCCTCCGTC CACCTCACAC ACATATGAGG GGAAATTACT CACAAAACTT ACTCACACAC      1140
     ACACAGACTT TAGAGGCGCC AAAACGAGCG ATGCAATGGG AAGTTTCCCC TCTCTCTCGC      1200
     ACAGCGACAA TAGCATAGAG AAAAATCTGA GTTCTTCCAC CAAAATTGGA CCAAACGCTT      1260
     CTTCCCCTCC TTCTCATGCA CACACTCACA CTAGCAAATC CACTGATATA AGCTTAGAAA      1320
     GCCGCTCAAA ACATCCCGCG CTTGCCAATA CGGACGCACG CTCTATAAAA GCCAATGCTA      1380
     ATGACAATGG GGAAATTTTC TCCTCACTTA TACAAATTGA CGAACGCAAG CAAGAGGAAA      1440
     GGCCTTGCAC AACTATCAAC GCTTTTTGGT CTATTTTTAA ACCCAAGCCG GACGTTACTA      1500
     AACTAAGTCT AAAGAGGAAA CCCACCAATC CCACTAAAAA CACTGGGAAA AAATGCATCT      1560
     CCCCTCATAA AAAGAGCGCT TATTTATGCC CTTCCGCTCA GGATGATTTA AATTTAAATT      1620
     TAAACCCCAA ATCTAGCGCC AAGCCCACTG TGGTGAATTT ACCAGCTGCC CGCATCCTAA      1680
     GCCGGCCTGC AGCCAAGCGG GATTTATTTA AATCATCATC CTCCCGAAGC CCAGACGAGC      1740
     AGCCTATGAG TTTTTCGGAA GTGGTCGCTG GCACGGGTTC AATTTTTGCG GCACCCTGTG      1800
     TCCCGGCACC TTTAACGAAA ACTCCAGGCA AGCGGACAAA CGACGATCTG GACTGCTCCA      1860
     ACTTTAAGAC GCCCAATAAA AAATTATGCG CGACTTCCAA CTTTGTAACT CCCAGCATTT      1920
     TTCCGCCGCT CATCACTCCC GTTTTCAAGA GCAAGGCAGC TCAATCTGTT TACGAGGAAT      1980
     CCAAAGCCAG AAATGGACCC CCCCCGCCGG CCCTCGCCTG CAGCATCAAT GCCTCTGCTC      2040
     GCAGCGCAGC GGCGCCACCC GGGATCGCCC CCCTACCCCC TCATAATACA GATGCAGAGC      2100
     TGCCTCCATG GAAAATCGTG CCCCAGAGCC GTAGAGCACC TCCTATACTC GTCAATGATG      2160
     TAAAGGAAAT TGTACCTCTA CTGGAAAAGC TGAACTACAC AGCAGGAGTC TCCAGCTATA      2220
     CTACTAGGGC TATAGAAGGA AACGGGGTCA GGATACAGGC AAAGGACATG ACCGCCTATA      2280
     ACAAAATTAA AGAAGTCCTG GTGGCCAACG GACTTCCTTT ATTCACCAAC CAGCCCAAGT      2340
     CCGAGAGAGG CTTCCGAGTC ATCATCAGAC ATCTCCACCA CTCCACACCA TGCTCGTGGA      2400
     TAGTCGAGGA ACTGCTGAAG CTCGGATTCC AAGCGCGATT CGTCAGAAAT ATGACGAATC      2460
     CGGCTACAGG TGGCCCCATG CGAATGTTTG AAGTGGAGAT CGTCATGGCC AAAGACGGCA      2520
     GTCATGACAA AATACTCTCA CTCAAACAAA TCGGTGGGCA AAGGGTGGAC ATTGAAAGGA      2580
     AAAACAGGAC ACGGGAGCCA GTCCAGTGCT ACAGATGCCA AGGCTTCAGG CATGCCAAAA      2640
     ACTCTTGCAT GAGGCCGCCA AGATGCATGA AATGCGCTGG CGAACACCTG TCTTCCTGTT      2700
     GCACCAAACC AAGAACCACC CCCGCCACCT GCGTAAATTG CTCTGGGCAG CATATTAGCG      2760
     CGTACAAAGG ATGCCCTGCA TATAAGGCGG AAAAACAAAA GCTGGCGGCA AACAACGTTG      2820
     ACATAAACAA AATAAGAACA ATCAAAGACG CAACAAATAA CTTTTATAAA CGTCAAGGCC      2880
     CCCCTCTACG CAACAACACC CCTCGGCTAC CGCACAGCTC AGCAATCCTG AGCAAATCAA      2940
     TTGCCGAAGC TCGCCAGGAG GCAGCCAGAA AGTCGATGTT AAATCCATTC CGACAAAATA      3000
     TAAACGACAG AAGACCACGA TTCTCCTCCC ACGACACGGC CATTCAGAAG CGTCTGAATA      3060
     AATGGCGCCG AAACACCAAC AAAATACCCA AAAAGGGTAG GATAGCCTTA AAGGATAATG      3120
     CAAAGCCACG ACCGGCACAT AGGACAAGTA ACCCAGCGCA AAGACATCTG GAGGACTACC      3180
     AGGACATGCT CCGAAGGGAA AGGAGTGAAG AAAACGACCA GGAATCTGAG AAGGGCACCC      3240
     CCAATACCAA GCAGGTCGGC AATGACAGCC CTCCGACCAC GAGCAGAGCA GCCAGAGCCA      3300
     GCTTTAAGCC AAGAATCATT GACGATACCA CGCCATCGCC AAAAATCTGC AATCCCAACT      3360
     CACAAAAAGG CCTCTTGGAC GACCCCACAA CAAGCTTAGC TAATAGAGTC GACAATTTAG      3420
     AAAAGAAAAT TGACATTTTA ATGGCCTTAA TCATACAAGG AAGAAATAAC AATCTTGACA      3480
     TGGATACATC CAATTAATCT TACAACTACT TATATATTCT TTAATAAATA TATCCAATAG      3540
     AAAAGCGCAC GTCGGTCTGC TTTTAAAATC CTTCACCGTC ATCACCTTCC TCGACGGAGC      3600
     CTAATTTATT GGAAAAATAA ATCAATTATA TGTTGGCACA AAAATGTAAA CACACACTCA      3660
     CCTAAACGCA CCCGGACGAA CAAGCCTATG ACAACGCACT CCAGCTGATC TGTAAGAAAC      3720
     AAAAAATATG AATAGATAGA TCGATATGAA AAGGATATGT GCGGCAGAAA CATGATGAGC      3780
     AAAAGGCGAC TCGCTGCAGC AACTTATGCA CAACGTCACT TACCTGAAAT TTCTTGCCGT      3840
     ACGATCTCCT GTAGTATCCC TTATCACAGC TGCAATCTAC TTGCAATGCT GCACTGCAAT      3900
     AAACGTACTA CAAAAGCTGC ATACGTTTTG ATCAGGACAC CTCGTGCGGA CGTGCTAAAA      3960
     AAAATTTCCT TTCTGCTGCT CTTATTGACG CTAAAACCTT AAAACCTACA AACAAAACAA      4020
     TTAAATAATA ACAAATCAAA TAAGACAACC AAATAATACA CTTACCTCAT TGACTGCAGC      4080
     TAAATCGCTG ACCCACATTC AGTGCAGCCG ACAGCAGGAG ACGGGCCCGC AAAAGCAAAA      4140
     CAAAATCGCC AATTTTGCGA TTATAAACAC GAAAAATTGA CAATTTTGCG ATGCCGTCTC      4200
     CGCCTCCTGA TGCCACTGCA TTGACAAGCA TCACTAGCGA GGAGCTGACA CCACACCAAA      4260
     AAGCTGTAAA ATCCGTCCAC AAATTGTATA TTTTGCCTCA GTGTCGTATC TGCAATGTTT      4320
     TTCCGATAAC CTGTAAGGAA AGAAAAATTA ATAAGAAAAT TATACAAAAT TAATTAAGGA      4380
     CGACAGAAAA TAGCAAACCA GACAGGCAAA TTAACAGATA CAAATATGAG ACTCCATCCT      4440
     GCTGCCGACA CACAAGTAAA TCCTTCAACT CGACAACAGG AGACGGGCCT TGCAAAAGCA      4500
     AAACAAAATC GCCAACTTTT GCGATTATAA ATACAAAAAA TTGACAATTT TGCAACGCCG      4560
     TCTCCACCTC CTGTTGCCAC TGCATTAATA AGGATCACCA GCGCGGCGTG ACGCCACACT      4620
     AAAAGGCTGC AAAATCCGTC CACAAAATGT ATACTTTTCC TCAGTACAAT ACTTTCTAAT      4680
     GAACTTCCGC CAACCTGCAA TGAAAAGAAA AGAAATAGGT ATATAAAACA AAACAAACAA      4740
     AAGGACAACC TAAAATTAGC AAACCAGACA GGCATACTAG TAGATGCTAA TATGCAGCTC      4800
     CATCCTACTG ACGACAACCA CGCAACTCCT TTCTCCAAGA CCGCAAATAC TGAAACAAGG      4860
     AAGCACAAGC TAATACTGGG AATTATTTAT TTAAACAAAA ATACTTATCT AATTGCCAAT      4920
     TCGACGACTC CAAATCCGCG GCTAACCGGC GGCGATGGCC CATAAATAAA GGGCCTCCTA      4980
     ATTAATTACA AAATGTACCT GAAAAACATA AAATTAACGC AACTATAATT AACGCAATTA      5040
     ATAAATCAAA TAAATACAAG TATAATACTT ACCTCCAAGC AAACGTACCT GAAAAACAAA      5100
     ACCAAAAAAA AAATTAATGC AATAAATAAA TCAAATAAAT ACAAACATAA TACTTACCTC      5160
     CAATTTACCT CCCAGCCAAT CTACCTGAAA AACATAATCT AATACAATCT CAAAAACAAA      5220
     TAACAAATGT AATACTTACC AAATTTTAAT TTTGTATTCA TTTCCATGAC CCCAACGCTG      5280
     CAACTGTCCT CGGCAACAAT TCCTGTTCCG GCGGCTCCAT GCTGCCAATC CTGACGCACT      5340
     GGCCACAAGA CGCGGCGCTG CTGGCAATCT CTCGATGAAC AACCGATCTA CAATTTCCAT      5400
     GACGACTCCT CTGTCACGAT GAGACAGAAG ACACCACCAA CGCCAGCAGC TCCAAAACAA      5460
     TACAACAACG GCCGCGCGGA ACCCATCTTC AGAATTCCCT CTTCCTGACG ACCGGCGAAC      5520
     GAGTTCTGGA ATAAACAATG TATTAATTGC AAACATCTAC CGATGAGGGT AGAAGAGATA      5580
     CTCACCAAAC GACTGCGGCG CGGGAACAAA CTAACTGCAA CGCCGGCCGG ACCTATTTGT      5640
     TGCAAGTGGC GCGCATCCAG CGCCTGCAAC ATGCCCCAGC CCAAGTACAC AACTACTTAC      5700
     CTGCAACGTC GCCAGAGGCT CCCAGCGAAT CGGTGCTTCC GTCCTTCTGG CGGGGGTACC      5760
     TGAAAAGAAA CAAATTAAAC AATATTAATC CTAAATTTCA ATGTTTTTTG TAAAATAATT      5820
     TAAATTGTTA AATGTAAACA AGCCTTGCAA TATGTTAATG TTACCAGTCC ATGCTACTGT      5880
     CTAAAAGCCA AGAATACAAA AAATACTAAT TATAAACTAA CTCACCACGC CCAACCCCCA      5940
     AACTCACCCC ATGCAATGTT AAACCTATAA ATTCAAATAA TTGTACCTAT ATATTGCACA      6000
     TACTGTAATC AAAGGCAAAA TAAATCGTGG ATGCGGAACA GAATTTACTC TGTCTCCGTA      6060
     CCTCCACCAG CAAAGTTAAA AAA                                              6083
//
ID   DMIFACA    standard; DNA; INV; 5371 BP.
XX
AC   M14954;
XX
DR   FLYBASE; FBgn0001249; I-element.
XX
FT   source          M14954:100..5470
FT   SO_feature      CDS ; SO:0000316:187..1467
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0020417; I-element\gag"
FT                   /db_xref="SPTREMBL:Q24362"
FT                   /protein_id="AAA70221.1"
FT                   /translation="MTDPPNIYKITSKTYQSQLGEPKFIIIKRNDNNSFERTSPFIIKK
FT                   SVDFACGGEVEGCKRTRDGNLLIKTKNELQARKLLKLTKIADEDVTASEHKTLNFSKGV
FT                   IYCNDLRHIDEDTILQELKPQKVSEVKKIMKRQNPNSNSDTNNITLVETGLIIITFESH
FT                   KLPEIVRIGYETVRVRDYIPLPLRCKKCLRFGHPTPICKSVETCINCSETKHTNDGEKC
FT                   TNEKNCLNCRNNPELDHQHSPIDRKCPTFIKNQELTAIKTTQKVDHKTAQHIYFERHGF
FT                   QTKNTYAKTLTNGTTQRTTNTPSPNIHTNTTQSQQQNPHHTPKSAAQNTSAKTPTTEPA
FT                   KTTLLSNQPHQHHHHHSYDKLEDMDTDYTPTRKPSTTYSSQLTEDLKIKIFPKDKSNNL
FT                   SINLKASKLKAKAHKNKHTNNSDSESI"
FT   SO_feature      CDS ; SO:0000316:1938..5195
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0020418; I-element\RTase"
FT                   /db_xref="SPTREMBL:Q24363"
FT                   /protein_id="AAA70222.1"
FT                   /translation="MAPSWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFSTHNTYTH
FT                   IDLTLCSPILAPHAKWKILNDLHGSDHFPIITTLFPTTNPQKFYRPFFKLKEANWEQFN
FT                   ALTHQTNKKYPTSHNVNKEAALINRIILYSANLSIPQTSPNTHPYRVPWWNKHLDQLRK
FT                   EKQLAWKKLNRTITVDNILDYRRKNAIFRYELKKRKKEASSSFTSTIHPTTPSSKIWAN
FT                   IRRFCGLNPAKQIHAITNPVNNETTLASNEIANIFAQHFSDLSGDWNFSEEFRNNKYRN
FT                   NIHLYTPSPIAQTIEENITYLELSSALQTLKGCAPGLNRISYQMIKNSSHTTKNRITKL
FT                   FNEIFNSHIPQAYKTSLIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRLWWLV
FT                   TYNNLINDKQFGFKKGKSTSDCLLYVDYLITKSKMHTSLVTLDFSRAFDRVGVHSIIQQ
FT                   LQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPISVILFLIAFNKL
FT                   SNIISLHKEIKFNAYADDFFLIINFNKNTNTNFNLDNLFDDIENWCSYSGASLSLSKCQ
FT                   HLHICRKRHCTCKISCNNFQIPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIK
FT                   CLSSLKFNCNTHTLLNVAKATIIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGAY
FT                   RSTPINNLLYESNTPPLEMKRDLQIAKLSQNLILSKNTPIHKFLKPKKANKKKTSTIDR
FT                   TIKLSLELNLPYKPIKLHKNKPPWTLPNLIDTSLRIHKKEQTSPDQYRKLYEHTKNNLK
FT                   THNFIFTDGSKINYTISFAITTETDVLKYGILPPYSSVLTSETIAILEAIELTKNRRGK
FT                   FIICSDSLSAVDSIQNTNNNSFYPSRIRSLITQHAPKIKIMWIPGHSGIKGNELADQAA
FT                   KSASSMPLILTPNINTTDIKKHLKADLATKQKEHIINCSPWYQSINTNTSHPCDYLKQS
FT                   HPNWTRLDQIKIIRLRLGHTNITHQHYLNPNSIPTCPFCQGDISLNHIFNSCPSLLQTK
FT                   QDIFNNTNPLDLLSKPNPDNIQKLILFLKKTKLYHKI"
XX
CC   Derived from M14954 (g157749) (Rel. 44, Last updated, Version 2).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 5371 BP;  2176 A; 1446 C; 606 G; 1143 T; 0 other;
     CATTACCACT TCAACCTCCG AAGAGATAAG TCGTGCCTCT CAGTCTAAAG CCTCGCTTCG        60
     CGTAAGCCCA AAACTCTTAT CAGCAAAATC TTGATAAACA AATATCAACC ACAAAGAGAA       120
     AATAAAAAAC TTAACAACAA AAACAACAAT ACCGCTAATC CGGGCTCAAG CCCTTAACCA       180
     ACAATCATGA CAGACCCACC AAACATTTAC AAAATCACTT CAAAAACATA CCAATCCCAA       240
     TTAGGCGAAC CTAAATTTAT AATTATTAAA AGAAATGACA ACAACTCTTT CGAAAGAACT       300
     TCACCATTCA TCATAAAAAA ATCGGTGGAC TTTGCCTGTG GAGGAGAAGT TGAGGGATGC       360
     AAACGTACAA GAGACGGCAA CCTGCTAATA AAAACCAAAA ATGAATTACA AGCCAGAAAA       420
     CTCCTAAAAC TAACAAAAAT TGCAGATGAG GATGTAACAG CAAGTGAACA TAAAACATTA       480
     AACTTCTCTA AGGGAGTTAT TTACTGTAAC GACCTTAGAC ACATCGACGA AGACACAATT       540
     CTACAAGAAC TAAAACCACA AAAAGTATCT GAAGTTAAAA AAATAATGAA ACGGCAAAAC       600
     CCCAACTCTA ACTCCGACAC CAACAACATC ACATTAGTTG AAACTGGACT CATAATTATA       660
     ACCTTTGAAT CGCATAAGCT CCCCGAGATA GTACGAATCG GGTACGAAAC AGTCCGAGTA       720
     CGAGACTATA TCCCACTCCC ACTTCGATGC AAAAAATGCC TCCGCTTCGG TCATCCAACA       780
     CCCATATGCA AAAGTGTAGA AACTTGCATC AATTGCTCTG AAACAAAACA CACAAACGAC       840
     GGAGAAAAAT GCACAAACGA AAAAAACTGC TTAAATTGCC GAAATAACCC AGAACTTGAC       900
     CATCAACACA GCCCAATTGA CCGCAAATGC CCTACGTTCA TAAAAAACCA GGAATTAACA       960
     GCAATTAAAA CCACACAAAA AGTTGACCAT AAAACGGCCC AACACATATA TTTCGAACGT      1020
     CACGGCTTCC AAACGAAAAA CACCTACGCC AAAACACTTA CAAACGGCAC AACCCAGAGG      1080
     ACAACAAACA CTCCATCACC TAATATTCAC ACAAACACAA CCCAATCACA ACAACAAAAT      1140
     CCGCACCACA CACCCAAATC AGCAGCACAA AACACTTCAG CTAAGACACC AACAACTGAA      1200
     CCAGCCAAAA CAACCTTACT ATCCAACCAA CCACACCAAC ACCACCACCA CCACAGCTAC      1260
     GACAAACTAG AAGACATGGA TACCGACTAC ACACCTACCA GAAAACCATC TACGACATAC      1320
     TCATCACAAC TCACAGAAGA CCTAAAAATA AAAATCTTCC CTAAAGATAA GTCCAATAAC      1380
     CTATCCATAA ACCTTAAAGC ATCAAAACTA AAGGCCAAAG CCCACAAAAA CAAGCACACT      1440
     AACAACAGCG ACAGCGAATC CATATAGAAC TCTACACAAA ACCCTAACCG TTAACACTAC      1500
     CTTTAAGTAA GTTATAAGCT TTAATTTTCT CACAAATGTC CCTAACTATA ATCCAATGGA      1560
     ATCTAAAAGG ATATCTAAAC AACTACAGCC ATCTCCTTAT TCTAATCAAA AAATACTCCC      1620
     CCCACATAAT TTCCCTCCAA GAAACCCATA TACAATACAC TAATAACATT CCAACCCCAA      1680
     TAAACTACAA ACTATTAACA AATATTGCCA CCAACAGATT TGGGGGGCGT ACGACTACTA      1740
     GTGCATAAGT CAATACAACA CACTGTCCTC AACATAACAA TCGATATAGA AGCAATAGCC      1800
     ATAAATATAG AATCTAAACT TAAATTAAAC ATATTTTCCA CATACATTTC TCCGACCAAA      1860
     AACATAACTA ACCAGACACT CCATAACACA TTTAACATAC AACAAACACC CTCTCTAATT      1920
     ACGGGAGATT TTAATGGATG GCACCATCCT GGGGCTCCCC AACAACAAAT AAACGAGGAA      1980
     AAATAACTCA TAGATTCATT GACAACATGC ACCTTATCCT GTTAAACGAC AAATCTCCCA      2040
     CACACTTTTC AACACACAAT ACATACACAC ACATAGACCT CACACTCTGC TCTCCAATCC      2100
     TAGCCCCCCA CGCCAAGTGG AAAATACTAA ACGATCTTCA CGGTAGCGAC CATTTCCCTA      2160
     TTATCACAAC ACTATTCCCA ACAACCAATC CACAAAAATT CTACAGACCC TTTTTTAAAC      2220
     TCAAAGAAGC CAACTGGGAA CAGTTCAACG CTCTTACCCA CCAAACCAAC AAGAAATACC      2280
     CCACCTCCCA CAACGTAAAC AAAGAAGCCG CTCTAATCAA TAGAATCATC CTTTATAGCG      2340
     CAAACCTCTC CATCCCACAA ACCTCACCTA ACACACATCC ATACAGGGTT CCATGGTGGA      2400
     ATAAACACCT CGACCAATTA CGTAAAGAAA AACAACTTGC CTGGAAAAAA TTAAACCGCA      2460
     CAATTACTGT TGACAACATT CTAGACTATA GACGCAAAAA CGCAATATTT AGATACGAAC      2520
     TAAAAAAGAG GAAAAAAGAA GCTTCCAGCT CTTTCACCTC AACCATCCAT CCCACTACTC      2580
     CCTCATCCAA AATATGGGCC AATATAAGAC GCTTCTGCGG ACTTAACCCA GCAAAACAAA      2640
     TTCATGCCAT CACAAACCCA GTAAATAACG AGACTACATT GGCTAGCAAC GAAATTGCTA      2700
     ACATATTCGC ACAACATTTC TCTGACCTCT CCGGCGACTG GAACTTCTCA GAGGAGTTCC      2760
     GGAACAATAA ATATAGAAAT AACATACATC TCTACACCCC CTCTCCAATA GCCCAAACCA      2820
     TAGAAGAGAA CATAACGTAT CTAGAACTTA GCTCAGCACT ACAAACATTA AAAGGATGTG      2880
     CTCCAGGACT AAATAGAATC TCGTATCAAA TGATCAAAAA TAGCTCCCAC ACAACAAAAA      2940
     ACCGAATAAC GAAACTATTT AATGAAATAT TCAATAGCCA CATACCTCAA GCCTACAAAA      3000
     CAAGCCTAAT CATCCCAATC CTTAAGCCAA ACACCGACAA AACGAAAACT TCCTCATACC      3060
     GACCCATCTC CCTCAACTGC TGTATAGCAA AGATACTTGA TAAAATAATT GCGAAAAGAC      3120
     TCTGGTGGCT AGTGACATAT AACAACCTAA TTAACGACAA ACAATTCGGG TTCAAAAAAG      3180
     GCAAATCGAC TTCGGACTGT CTACTCTATG TAGACTATCT CATAACGAAG TCAAAAATGC      3240
     ACACCTCCCT CGTCACTCTT GATTTTTCAA GAGCCTTCGA TCGAGTAGGT GTGCACTCCA      3300
     TAATCCAGCA ATTGCAGGAA TGGAAAACGG GTCCCAAAAT AATAAAATAC ATTAAAAACT      3360
     TCATGAGCAA CAGAAAAATA ACTGTCCGCG TCGGTCCGCA TACATCAAGC CCGTTACCCC      3420
     TATTCAACGG AATCCCCCAA GGTTCACCCA TATCCGTAAT ACTTTTCCTC ATAGCATTCA      3480
     ACAAATTATC CAACATCATA TCCCTACATA AAGAAATTAA ATTCAACGCA TATGCCGACG      3540
     ACTTCTTCCT TATAATAAAT TTCAACAAAA ACACAAATAC AAATTTCAAC TTAGACAATC      3600
     TATTCGACGA TATAGAAAAT TGGTGCTCCT ACTCAGGGGC ATCGCTTTCC CTATCCAAAT      3660
     GTCAACACCT CCACATATGC AGAAAACGTC ACTGCACATG CAAGATAAGC TGCAACAACT      3720
     TCCAAATTCC TAGCGTTACG TCCTTAAAAA TTCTAGGAAT AACCTTAAAC AACAAATACA      3780
     AATGGAACAC ACACATAAAC CTACTTCTAC CCAAACTACA CAACAAGCTA AATATAATAA      3840
     AATGCCTATC TAGTCTTAAA TTTAACTGCA ACACGCATAC ACTACTTAAT GTCGCAAAAG      3900
     CAACAATTAT AGCCAAACTA GAGTATGGTT TGTTTCTGTA CGGCCATGCT CCCAAAAGCA      3960
     TTTTAAACAA AATAAAAACA CCGTTTAACT CCGCTATCCG TCTAGCTCTC GGCGCATATC      4020
     GCTCTACCCC AATAAATAAC TTACTTTACG AATCGAATAC TCCCCCCTTA GAAATGAAAC      4080
     GAGACCTTCA AATAGCCAAA CTATCCCAAA ACCTAATCCT CTCCAAAAAC ACACCAATAC      4140
     ATAAGTTCTT AAAGCCTAAA AAAGCTAATA AGAAAAAAAC ATCAACAATA GACCGAACAA      4200
     TCAAACTTAG CCTAGAACTT AATCTACCCT ACAAACCAAT AAAACTCCAT AAAAACAAAC      4260
     CACCATGGAC CCTCCCCAAT CTAATAGACA CGTCACTTAG AATCCATAAG AAAGAACAAA      4320
     CATCTCCAGA CCAATACAGA AAATTATACG AACACACAAA GAATAACCTC AAAACACACA      4380
     ATTTCATATT CACTGACGGT TCAAAAATTA ATTACACAAT ATCATTCGCC ATTACAACGG      4440
     AGACAGACGT CTTGAAATAC GGCATACTGC CCCCATATTC ATCCGTCCTC ACCTCCGAAA      4500
     CAATCGCCAT CCTAGAAGCA ATAGAACTTA CTAAAAACCG AAGAGGCAAA TTTATTATCT      4560
     GCTCCGACTC CCTATCAGCA GTAGATTCAA TTCAAAACAC AAATAATAAC AGCTTTTACC      4620
     CAAGCAGAAT ACGATCGCTA ATAACGCAAC ACGCACCTAA AATTAAAATA ATGTGGATTC      4680
     CTGGCCATTC AGGAATAAAA GGAAATGAAT TAGCCGATCA AGCTGCAAAA TCAGCAAGCA      4740
     GTATGCCACT TATCCTCACC CCAAACATAA ATACCACAGA TATAAAAAAA CACCTTAAAG      4800
     CCGACCTTGC GACAAAACAG AAAGAACACA TAATAAACTG CAGTCCATGG TACCAATCTA      4860
     TTAACACGAA CACCTCACAC CCATGCGATT ACCTTAAACA ATCCCACCCA AATTGGACCA      4920
     GACTCGACCA AATAAAAATA ATACGACTTC GACTAGGACA CACAAACATA ACCCACCAAC      4980
     ACTACCTAAA TCCCAATTCA ATACCAACTT GCCCGTTTTG CCAAGGTGAT ATTTCTTTAA      5040
     ACCACATATT TAACTCATGC CCATCCCTCC TACAAACCAA GCAAGATATA TTTAACAACA      5100
     CCAACCCTCT AGACCTTCTT AGCAAACCCA ATCCAGATAA CATACAAAAA CTCATACTTT      5160
     TCCTCAAAAA AACTAAATTA TACCACAAAA TCTAAAAACA AAACAGGCAT TTGTACATAA      5220
     CAAGCCAGCA ATTAGTTACC AAATTAGATA TTAACTAAAT TAAGATATAA TAACATTGTA      5280
     AATAAATATA GCTGTAAGCC CCGTAGCTAA TGCTATACTA TCTAAGTTAG TCTAGTTTTG      5340
     TAAACTATTC TATCTATCAT AATAATAATA A                                     5371
//
ID   DMLINEJA   standard; DNA; INV; 5020 BP.
XX
AC   M22874;
XX
DR   FLYBASE; FBgn0001283; jockey.
XX
SY   synonym: wallaby
SY   synonym: sancho
XX
FT   source          M22874:115..5134
FT   SO_feature      CDS ; SO:0000316:300..2051
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0020297; jockey\gag"
FT                   /db_xref="SWISS-PROT:P21330"
FT                   /protein_id="AAA28674.1"
FT                   /translation="ISIALYGISIKTIDIMENSFAQSRPSNGCDKFEKMRKVAGVEPGE
FT                   LRSQLRASCAVVSPNLEGMPTQSAVSSLMVTISSNTNASVTCTISNVQANMICTPTYTD
FT                   CTTVTTSICPTTPYDNGLPTPLSSLPNKPSKANCPFQAHDRTVNRKRKGVSQPPLPILT
FT                   PSPSRKTKRQATMPLNEEASTSTAAALNNNRFALLSAEAENMEQDVSDADSDIEDSAAR
FT                   DGGGQSAKYSKPPAICVPSVSDPVTLERALNLSTGSSNYYIRISRFGVSRIYTANPDAF
FT                   RTAVKELNKLNCQFWHHQLKEEKPYRVVLKGIHANVPSSQIEQAFSDHGYEVLNIYCPR
FT                   KSDWKNIQVNEDDNEATKNFKTRQNLFYINLKQGPNVKESLKITRLGRYRVTVERATRR
FT                   KELLQCQRCQIFGHSKNYCAQDPICGKCSGPHMTGFALCISDVCLCINCGGDHVSTDKS
FT                   CPVRAEKAKKLKPRSRLPMTNNIATLKPPQRSSSGYIPAEALRTNISYADIARRNTTQS
FT                   RARATVQAEVIPTSDNSLNNKFMTLDNSIRAINTRMDELFKLIHETVEANKAFRELVQV
FT                   LITRIPK"
FT   SO_feature      CDS ; SO:0000316:2048..4798
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0015952; jockey\pol"
FT                   /db_xref="SWISS-PROT:P21328"
FT                   /protein_id="AAA28675.1"
FT                   /translation="MTQPTLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVG
FT                   QRIYLPGYLMYHAHHPSGNSRGGSAVIIKSRLCHSPLTPISTNDRQIARVHLQTSVGTV
FT                   TVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIA
FT                   HGQYQVLATGEPTFYSYNPLLTPSALDFFITCGYGMGRLDVQTLQELSSDHLPILAVLH
FT                   ATPLKKPQRVRLLAHNADINIFKTHLEQLSEVNMQILEAVDIDNATSLFMSKLSEAAQL
FT                   AAPRNRHEVEAFRPLQLPSSILALLRLKRRVRKEYARTGDPRMQQIHSRLANCLHKALA
FT                   RRKQAQIDTFLDNLGADASTNYSLWRITKRFKAQPTPKSAIKNPSGGWCRTSLEKTEVF
FT                   ANNLEQRFTPYNYAPESLCRQVEEYLESPFQMSLPLSAVTLEEVKNLIAKLPLKKAPGE
FT                   DLLDNRTIRLLPDQALQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRP
FT                   TSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMEN
FT                   KEYAVGAFLDIQQAFDRVWHPGLLYKAKRLFPPQLYLVVKSFLEERTFHVSVDGYKSSI
FT                   KPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILA
FT                   ATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSCPGVSLNGRLIRHHQAYKYL
FT                   GITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGL
FT                   QVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYME
FT                   RLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPNLVLT"
XX
CC   Derived from M22874 (g157823) (Rel. 47, Last updated, Version 5).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 5020 BP;  1527 A; 1198 C; 1055 G; 1240 T; 0 other;
     AAAAATCATT CACATGGGAG ATGAGCAATC GAGTGGACGT GTTCACAGAA GTCGCGAGAT        60
     AAAACAAAAA CGTAATTGTG ATCCATCACA AACATCTGCG CAGATCGTGT GCTTATCTCA       120
     CAAACAAAAT CTATTTTTAG TCACTGCATA ACGGTGACGG CTTCGGTTCG CGAAACTTAT       180
     CAGCAACTAG CAATTTCTAA GCTGTGTTGT TTTTGCCCCT CGCCCTGCGC GCTGCGCAAG       240
     CGGGAGGTTG TTACAATTTA CCTTACAAGT AAACCGGTAA ATCTTATCGT GTTTAGTAAA       300
     TATCAATTGC ATTATACGGC ATAAGTATAA AGACAATTGA TATAATGGAG AATTCATTTG       360
     CTCAATCGCG ACCTAGCAAT GGGTGCGATA AATTTGAGAA AATGAGGAAA GTAGCAGGTG       420
     TTGAGCCAGG AGAATTACGC TCCCAACTCC GCGCCAGCTG TGCAGTTGTT TCCCCTAACC       480
     TGGAAGGTAT GCCAACTCAA TCTGCGGTCT CCAGCTTAAT GGTGACAATC AGCAGCAACA       540
     CCAATGCAAG TGTTACCTGC ACTATTTCTA ACGTACAGGC CAACATGATC TGTACTCCTA       600
     CATACACTGA TTGCACAACC GTGACCACTA GCATTTGCCC AACTACGCCT TATGACAATG       660
     GACTGCCGAC ACCTCTGTCA TCACTGCCCA ATAAGCCATC TAAAGCGAAT TGCCCCTTTC       720
     AAGCACATGA TCGTACTGTC AACAGGAAAC GAAAAGGCGT GTCTCAGCCC CCATTACCTA       780
     TCCTCACCCC TTCTCCAAGC CGTAAAACTA AAAGGCAGGC CACTATGCCA CTCAATGAGG       840
     AGGCCTCTAC CTCCACTGCA GCAGCATTAA ATAACAATCG CTTCGCGCTT TTGTCCGCTG       900
     AAGCGGAGAA TATGGAGCAA GACGTGTCGG ATGCTGATTC TGACATTGAA GACTCTGCTG       960
     CCCGAGATGG TGGTGGACAA TCCGCTAAAT ATAGCAAACC CCCAGCCATA TGCGTACCAA      1020
     GTGTAAGCGA TCCGGTCACC TTGGAACGGG CTCTCAATCT GAGCACCGGC TCCTCAAACT      1080
     ACTACATCCG CATTTCTAGA TTTGGTGTAT CCAGAATCTA TACAGCCAAC CCTGATGCTT      1140
     TCCGCACCGC TGTAAAAGAA CTAAATAAGT TAAATTGTCA ATTCTGGCAT CACCAACTTA      1200
     AAGAAGAAAA ACCCTACAGA GTAGTGCTTA AAGGAATCCA TGCTAATGTT CCTAGTTCGC      1260
     AGATAGAACA AGCATTTAGT GATCACGGCT ATGAGGTCCT TAATATCTAT TGCCCCAGAA      1320
     AGTCTGACTG GAAGAACATT CAGGTAAACG AAGATGATAA TGAAGCTACA AAAAACTTCA      1380
     AAACTAGACA AAATTTGTTT TATATTAATC TTAAACAAGG CCCGAATGTT AAAGAGTCTC      1440
     TTAAGATAAC TCGACTTGGC AGATACAGAG TCACTGTTGA GCGCGCTACA CGTAGAAAAG      1500
     AACTGCTACA ATGTCAAAGA TGCCAAATTT TTGGACACTC TAAGAACTAT TGCGCCCAGG      1560
     ATCCTATTTG TGGTAAATGT AGTGGTCCCC ATATGACCGG GTTCGCTTTG TGCATAAGTG      1620
     ACGTATGTCT GTGTATAAAT TGTGGTGGTG ATCATGTCTC GACAGACAAA AGCTGCCCTG      1680
     TCAGAGCAGA GAAAGCCAAG AAGCTAAAAC CAAGGTCCAG GCTACCGATG ACTAATAATA      1740
     TTGCCACACT CAAACCTCCA CAACGTTCTT CAAGCGGTTA CATACCAGCT GAGGCATTAA      1800
     GAACCAACAT CTCTTATGCT GATATTGCTC GACGCAACAC GACTCAATCT AGGGCTCGTG      1860
     CTACTGTGCA GGCTGAAGTT ATACCAACGT CGGACAATAG CCTTAACAAT AAATTTATGA      1920
     CGTTAGACAA CTCCATTCGG GCCATCAATA CGAGAATGGA CGAACTATTT AAGCTTATAC      1980
     ACGAAACTGT AGAGGCTAAT AAAGCTTTCA GAGAACTGGT TCAGGTTCTA ATTACACGTA      2040
     TTCCTAAATG ACTCAACCAA CCTTAAAAAT CGGATTGTGG AACGCTCGCG GATTAACAAG      2100
     GGGCTCTGAG GAGCTTCGGA TATTCCTCAG CGATCACGAT ATAGACGTAA TGCTTACCAC      2160
     GGAAACACAC ATGCGAGTTG GTCAGCGCAT CTATCTCCCA GGGTATCTTA TGTATCACGC      2220
     CCACCACCCC AGTGGTAACA GTAGAGGTGG CTCTGCAGTC ATCATAAAAT CTAGACTTTG      2280
     TCACAGCCCT CTGACACCTA TCTCTACTAA TGACAGGCAG ATAGCGAGAG TGCACCTGCA      2340
     AACATCGGTT GGGACCGTCA CTGTAGCTGC TGTTTATCTA CCTCCAGCAG AAAGATGGAT      2400
     AGTAGATGAC TTCAAATCCA TGTTTGCTGC GTTAGGCAAC AAATTTATTG CTGGTGGTGA      2460
     TTACAATGCC AAACATGCAT GGTGGGGGAA CCCAAGATCC TGTCCTAGAG GTAAAATGTT      2520
     GCAAGAAGTC ATTGCACATG GGCAATACCA AGTTCTGGCT ACGGGCGAAC CCACTTTCTA      2580
     CTCTTACAAC CCTTTGTTAA CACCATCAGC CCTTGATTTT TTTATAACCT GTGGGTACGG      2640
     CATGGGCAGG CTAGATGTAC AAACTCTCCA GGAACTCTCG TCGGACCATC TTCCTATTCT      2700
     GGCTGTATTG CACGCTACGC CGTTAAAGAA ACCACAACGC GTACGACTAC TTGCCCATAA      2760
     TGCTGACATA AACATATTCA AAACCCATCT TGAACAGCTG AGTGAGGTAA ATATGCAAAT      2820
     TCTGGAGGCG GTGGACATTG ATAATGCCAC AAGCCTTTTC ATGAGCAAAC TAAGTGAGGC      2880
     TGCTCAGCTT GCTGCACCGA GAAATCGGCA TGAAGTAGAG GCCTTCAGAC CACTTCAACT      2940
     TCCTTCCAGT ATATTGGCAC TGCTCAGGCT AAAACGAAGA GTTCGAAAAG AATATGCTAG      3000
     AACAGGTGAT CCCCGCATGC AACAGATCCA CAGTAGACTG GCCAACTGCC TGCATAAGGC      3060
     CCTTGCTCGA AGAAAGCAGG CCCAAATAGA TACCTTCTTG GATAACTTGG GTGCTGACGC      3120
     GAGCACAAAT TACTCACTGT GGCGTATCAC GAAACGGTTC AAAGCTCAGC CCACCCCAAA      3180
     ATCAGCAATC AAAAATCCGT CTGGTGGCTG GTGTCGCACT AGCTTGGAAA AAACTGAAGT      3240
     GTTCGCTAAC AACCTTGAGC AACGTTTTAC ACCCTATAAC TATGCACCGG AAAGTCTCTG      3300
     TCGTCAGGTT GAAGAATACT TGGAATCGCC CTTTCAAATG AGCCTGCCTC TGAGTGCTGT      3360
     CACACTGGAA GAAGTGAAGA ATTTAATAGC CAAGCTGCCA CTTAAGAAAG CTCCTGGAGA      3420
     AGATCTTCTT GATAATAGAA CCATTAGACT TCTCCCAGAT CAAGCATTGC AGTTCCTTGC      3480
     CTTAATATTC AACAGCGTTC TTGATGTTGG CTACTTTCCG AAAGCTTGGA AATCGGCGAG      3540
     CATAATTATG ATCCATAAGA CTGGAAAAAC ACCGACAGAC GTTGACTCGT ACAGGCCCAC      3600
     CAGCTTACTC CCATCTCTGG GTAAAATTAT GGAGAGGCTG ATCCTAAACA GGCTGCTCAC      3660
     ATGCAAGGAT GTTACCAAAG CGATTCCCAA ATTTCAGTTT GGCTTCCGGT TGCAGCACGG      3720
     TACTCCTGAG CAACTACATA GAGTAGTGAA CTTTGCTCTG GAAGCTATGG AAAACAAGGA      3780
     GTATGCAGTA GGTGCCTTTC TTGATATTCA ACAGGCATTT GACAGAGTCT GGCACCCTGG      3840
     GCTCCTGTAC AAAGCGAAGA GGCTGTTCCC GCCGCAGCTA TATTTGGTTG TTAAAAGTTT      3900
     CCTGGAAGAA CGCACATTCC ACGTCTCTGT TGATGGGTAC AAATCATCAA TCAAGCCAAT      3960
     TGCAGCTGGA GTTCCTCAAG GAAGCGTTCT TGGCCCAACC CTATACTCAG TTTTTGCTTC      4020
     GGACATGCCT ACTCACACAC CAGTCACAGA GGTAGACGAA GAAGATGTGC TCATAGCCAC      4080
     CTACGCTGAC GATACTGCTG TGCTCACGAA AAGTAAAAGT ATCCTGGCTG CCACTTCTGG      4140
     TCTACAGGAA TACCTGGATG CATTCCAGCA ATGGGCTGAG AACTGGAATG TGCGCATCAA      4200
     CGCTGAGAAG TGTGCCAATG TGACGTTCGC CAACCGAACA GGTAGCTGTC CGGGTGTCAG      4260
     TCTGAATGGA AGACTGATCA GACACCATCA GGCTTATAAA TACCTTGGTA TTACCCTCGA      4320
     TAGGAAGCTC ACCTTCAGCA GGCACATCAC AAATATTCAG CAAGCGTTCA GGACCAAGGT      4380
     TGCTCGGATG TCTTGGCTCA TTGCACCACG CAACAAACTG TCGCTTGGCT GCAAGGTCAA      4440
     TATTTACAAG TCCATATTGG CCCCCTGCCT GTTCTACGGC CTGCAGGTAT ACGGCATTGC      4500
     TGCGAAGAGT CACCTTAATA AGATCCGGAT TTTACAGGCG AAGACCTTAA GAAGAATTTC      4560
     GGGGGCTCCT TGGTATATGA GAACAAGAGA CATCGAACGC GACCTCAAGG TGCCCAAATT      4620
     AGGAGACAAG CTCCAGAACA TCGCCCAAAA ATATATGGAA AGGCTTAATG TACACCCCAA      4680
     CAGCCTAGCA AGGAAGCTAG GAACTGCAGC TGTGGTCAAT GCTGACCCTC GGACTAGAGT      4740
     CAAAAGAAGA CTCAAGCGAC ACCACCCTCA TGACCTCCCT AACCTGGTTT TGACCTAGAA      4800
     AGTCTTAGTT TTAAAATTCA TTAGAATAAT CAAATAAATA ATAATTACTA TGTTATATCA      4860
     ACTATTATAA TTCTCCCTAT CATTTTTAGA TTAAAAATCT GTTAGTCTTA AGTAACCAAG      4920
     ACACATTGTA AAATAAAATA ATTTAAGCAG ATCAAATTAA GTTGCCGCAT GGGTAACAGT      4980
     GCGTTGATCA AATAATAAAA ACATCATAAA AAAAAAAAAA                            5020
//
ID   DMTRDNA    standard; DNA; INV; 1435 BP.
XX
AC   X80025;
XX
DR   FLYBASE; FBgn0014967; hopper.
XX
SY   synonym: M4
XX
FT   source          X80025:1..1435
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..33
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1403..1435
XX
CC   Derived from X80025 (g510507) (Rel. 44, Last updated, Version 11).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 1435 BP;  456 A; 265 C; 212 G; 502 T; 0 other;
     CACTATGGGG CATTTGGCCT GTTTTTTTTA CAAAAATTAA TACCTCCTAA ACTATTGGAG        60
     ATATTTGGAT GAATTTTTTT TTATGCGTTA CACATGCCTC CAGGAATATT TTGGAAAAGT       120
     GGGCGTGCCC CAACTCCGCC CCATTTTTTT TTTTTTTTTT TTTTTTTTTT AATAATATAT       180
     TTTTAAAGTT TATTTTTAAT TTCAATAATG TATAATTCAT AACCGTCTTC CTCTTCACAA       240
     TCAGTAGAGT CTGAAGAATT TTTATCAGGT TCAAATTCGC AAGCTAACAT TTCAATGACT       300
     TCTGGTGGAA GAGATAGTCG CTTATGTTTT CGCCTCTTTA AATTTATTGA TGATATTATG       360
     GGATCCGAAG TATCCATTGC TCTGTAAAAG ACATCTGCGA AGCTACTAAT AGTTTTTGCC       420
     GTGGCTGGCT TCAACAAAAG AATTTTAAGT ATGGCTGCAA GATCCCGCAG GCAGCACTTC       480
     CGTGCAGCTT GAACCAAAAG ACGTTCGTTG TGTTTCTGCG CCCTTACGAG TTCATCTGCT       540
     TGCTGTCTTG GGCCACTCAA ATTTTTTAAA TAATATGACG TTTTCGGGAG TCCAACTAAT       600
     TTCCTTTCCT ATTTATTTTT CTCCTTTACC TTCAGGACTA GGTGTTCTTC TAACCAATTT       660
     GAAAAAAATT TTAAAAATTC ATATATTTTT CGATTGCATT TTCTCCAATT TCGTAAAAGA       720
     TTGACTGAAA TCATTCGTTA TTATTATTAT TAGTTAATCG TTTATTAAAG TCTAGCTTGC       780
     TATCAGAAAA ATGCCCACTG ATAAAAGTGC AAATAGAATT TTCCTTTTGA CGAACACCCT       840
     TTTGCGTGCG CCACACTTCC AGCAGGGCAG CATTGGAAAT CGAGATATTG CTCCCTAAAA       900
     AATGAAATTT CTCAAAAAAC CGCAAAAAAC GCACATAGAG ACTACCTGAT ATGAGTTAGG       960
     AATTGAACAC ACTACAACAT GGATATAAAC ACTTACTGAA CAAATTTGAA CAAATTGTTG      1020
     TAGCTCTATT CAAAGTTGAA AATTTTTTCA AACAACTACA TCTTGACACC ACTTGTTAAA      1080
     TGTACAAATT GTTAGAAATA GGCGCACACA ATAAACAATA TATTAATAAC AACACATAAT      1140
     AAGAACCTAA AGATTGATTA TCCATTTCAA ATTATACTCT CCTTCTTCTT CTTTTTAAAT      1200
     TTTAACACTT TGAAAGTTAA GCTAAATTTT GTGCGCAAAG CAGCCACGTG GTATATGCTC      1260
     GCAACAGCCG ACTTTAACAG CTGTTATTAT AACAGTGCAT TGTTAAATTA ACTTATGCGG      1320
     GCTATATCAT AACAGTTTAA CGTATTTCCA ATGTATTAAT ACTAAAATAC TTCAAATTTG      1380
     CATACTTGTG AAAAACACAT TATTGTAAAA AAAACAGGCC AAATGCCCCA TAGTG           1435
//
ID   DMRTMGD1   standard; DNA; INV; 7480 BP.
XX
AC   X59545;
XX
DR   FLYBASE; FBgn0002697; mdg1.
XX
FT   source          X59545:1..7480
FT   SO_feature      five_prime_LTR ; SO:0000425:1..441
FT   SO_feature      three_prime_LTR ; SO:0000426:7039..7480
FT   SO_feature      CDS ; SO:0000316:548..923
FT   SO_feature      CDS ; SO:0000316:1327..1557
FT   SO_feature      CDS ; SO:0000316:1749..3062
FT   SO_feature      CDS ; SO:0000316:2987..6673
XX
CC   Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7480 BP;  3067 A; 1298 C; 1235 G; 1880 T; 0 other;
     TGTAGTATAT ACGAATATAA TAACAATAAT AATAACAATA ATAATAATAA TATTAATAAT        60
     AATTATAATA TGAATCATAA TAATAAGTCA ACTAATAAGT AAACTTAGGA CCACCCTAAT       120
     TCCTTAGGGT CACCCTAGTA GATCTTTAGA TACACCCTAA TACTAAATAT GCGAATTCAG       180
     GATGTACGCC TTTAGGGGTC GGACTCGACT CCCATTGGTT ATCGAGTATG AACTTCATAC       240
     ATACATATTG CAGAATTTGC TAGTGTCAGC ACTTGGCTGT CACAAGAGAT CTCCCTGTAG       300
     ACCACACTAA GATCAGTTAT AAATCAGGAA TAGATCTGGA ATGTACACTC GCTTAATAAA       360
     AACCAAATAA AGATAAAATG ACCAACTGCG TTTTGAGACT TTATTAACTA CATCAGAAGT       420
     ATTAGAATTC AAATTAACTA CATGGCGACC GTGACAAAGG ATCGTTATAA GTTGTAGCAG       480
     AAGCTAAAGG AAACCGCTTG TGATAATTTT CAACTTCGAT GCTCATCCAC CAAGACGGCG       540
     GCAATTATGA AGAAAAAAGC GATCTGAGTG AGTAGAGTGT CAGTGTGATG GGAAAAAACA       600
     GGGGCGGAGT TCGACATAAT ATAAAAAAGA GAATAGCGCA CATAAAGTGG CTATTATATA       660
     CGAACACTCC ACCACCCCAA TGGTCGAAAG CTCAAAAACT ACAAGCTGAG CTAGACCACT       720
     GTGTCGAATA TCTCAAGAAA AAAATCCCCA CCACACGCGC TCACTCAGAA AATCAAATAA       780
     AATCGTTAAC AATTAACAAA ACTCCAACTC CCAATCCGAA AAGCCTGCCT GTTTTCAAGA       840
     AAAGATGCCC GAACGACTGC GAGGGACCAC TGTTCACACC GCATTGTGAA CATACGTGCA       900
     GACATTGCAG CTCCACCACA TAACCCCTAA ATGAGGAAAT CATCATCAAC GTGGTGAGCA       960
     GCCCGCTCAT TACGTCATCG AGGGAGTGTC AGCGTGCCAA CCCGGCGACG ACCAGATGAC      1020
     GCAGGAGGGT CAGAGTGAAG CAAATAGGAG CTGAAAAATA AAATATTTTT TTTGTTGCCC      1080
     TGCGTGGCAC ACCCTCGATG CACTGCGCTG CATATTAATA TTACACAAAA TATTGTAACA      1140
     TTGAGCGGAA CTTTTTCTGC CCGATGAGAA GAATGGCCCG TAAAGCCATA CACCAACTAG      1200
     GTAGGAAAAT GTAACTATAT TGAACAAAAA AAAAAAAAAT CAAAACAACA TATTTTTAAA      1260
     GTAAAATAAA CCAAAACCCA AAAATAAAAA AAAAAAAAAA AAAAAAAAAA ATAAAAATAT      1320
     ACAAAAATGG GTTGGTTTGG ATCTGACGAT AGTCAGACAA AAGATAATAC GGCCAATGTG      1380
     GTCAATAACT TAAAAATAGT CGACCATACA GATGACATTC AGTCACTGTG GTTACTCCTT      1440
     TTGATCATGA CGATCGTAAC AGTCGCTCAG TTTATATTAA CGCTATATGT TAAGCATAAC      1500
     AAGATAATAA AGAGGCGTTA TATAGGCAAA GCAGAGAATA GTTTGGATAA AATTTGAAAA      1560
     AAAAAAAAAA AAAAAAAAAA AAAAAAACAT CCGAGATGTA TTTTGAATTA AGATGATCTA      1620
     AAATTTTTAT TTTTAATATC AGAAAACTAG AATGAAAAAA AAAAAAAAAG ATTATTGAAG      1680
     AAACCTATTT GAGAGAGGCC AAAATTTATA AAGTTCGATT GCATAGATAA ATCCATAGTA      1740
     TTCTTTAAAT GGACTGGCAA GAAATACAAA ACGAGCTTAA AGAAATTAAA ACAACTTTTG      1800
     ACAAGTCTTA TAAATGCATG ACACCAAATA GAGAAGTGCA ACAAGACACT CTCAACAAGC      1860
     ATGCGCAGAT ATTGGTAAGA TGCTTTAATG GAGCACGCCA ATTAATTTAC AGAGAAAGGA      1920
     AAAGATTAAC AAAAAATCAT TTATCACAAG CAGTAAAATT TCTAAACAGG TTCCGTGAGA      1980
     ACTTGTTAAA CGTCAAGTAC AGACACAACT TAAATATTAC AATCCCAACG ATTTTAAGCA      2040
     CACCTATAGT GGCTGAGATC GGTGAGGATA TCGAAAGTGT AGGAGAATCA GAAATAGAAA      2100
     TAAAAGAAGA GGATCTCCAC GATCTTGCAA TTCCAGCGGT AATAACATTA CCCGAATTAC      2160
     TTGAAGAAGA ACTTTCAGAT TCAAATACAG GAATAAGAAT ACAGGAAACG GACAAAATGA      2220
     CAGACTCTGC CGCAACAGCA AGGGAATATG TGCGACAAAT TTCGTCCACA ATACCTGAGT      2280
     TTGACGGCAA AAAGTTAAAC TTGAATAGAT TCCTCACGGC TCTCCGGCTG ATAGATCTGA      2340
     CAAAAGGAGA TCAGGAGATG CTAGCGGTTG AGGTAATCAA GACAAAGATA CTTGGTCCAT      2400
     TATCACACAA AGTTGAAAAT GAAAAGACCA TTATCGGTAT AATAAATCTA TTAAAAGCAT      2460
     CAGTTAAAGG CGAATCGCCC GATGTCATCA AAGCAAAAAT GCTTAGTACA CAACAGCGCG      2520
     GCAAAACTGC AGCGCAATAT ACCACGGAGA TAGAAAACCT ACGTGGGTTG CTCGAAGCAG      2580
     CCTATATAGA TGATGGTTTA GATTCCAACA ATGCAGACAA ATTCGCTACA AAGGAAGCCA      2640
     TATCTGCAAT GACCAAGAAC TGTGGGCACG ATAAGCTCAA AACCATATTG GAAGCTGGAA      2700
     ATTTCAACAC GATGAATAGC GTGATTGAAA AATACATACA CTGCAGTACA GAAATGACCG      2760
     GCAATTCAAA TAGTGTATTA TTCTATAATA ATAGAGGACA CTATCGAGGT AATAATTACC      2820
     GAGGAAATTA CCAAAACAGA GGTAATGGCC GAGGAAATTA TAACTCCTAC AATAACAACT      2880
     ATAGAGGCAG AGGTGGTTAC CATGGTGGAA ACAGAGGACG AGGTGGTAAC CAAAATTATA      2940
     ATAGAGGTGG AGGTTACTCA AGAGGTAACC AAAACCATAA CTATAAAACA AGTCATGCCC      3000
     ACAATGTCCG AAACATACAA TCGGAAAACG AACATACCCC CTTGAGCGAC AATCTACAAT      3060
     AAAATTATAC AAAATTAATC TCAATTTAAG CATTTTTATA CGATTGAAGA ATATGAGTAC      3120
     CAATTCATGG GTAACTCTTT TAATAGATAC AGGTGCAGAA ATTTCCCTGC TTAAATGCAG      3180
     AAACAATAAT CTTAACGATT TAAATCCAAA AAATACAACA AATATATCAG GAATAGGGCA      3240
     AGGGACAATT CAGTCTCTAG GTACACTACA TTTAGAAATG TGTATTGCTA ATGCAGCAAT      3300
     ACCATATGAA TTCCATATCG TACCTAACAA TTTTCCTATA CCAGGGGATG GTATAATTGG      3360
     CTTGGATTTC ATTAAGAAAT ACAATTGTAT TTTGGAATTC CACGACCAAG AAGATTGGTT      3420
     CACTTTGAGG CCCAAAAATT TCAGGAACAT AAACATTCCT ATTATACATA CACTAGATAA      3480
     TGAAATAATT TTGCCAGCTA GATCAGAAGT GATTCGAAAG ATTCAACTAA CATCTACTGA      3540
     CACACATGTT CTCATTCCCA ACCAAGAATT ACAACCTAGC ATAATAATCG CAAGTGCACT      3600
     CGTAAACACT CAGAACGTTT TGATTCGAAT TATTAATACA ACTGAAAAAG ACGCTATAGT      3660
     TAGTAGCGCA AATATAAAAA GCGAATCATT GGATGATTAT GATGTATACA ACGCAAATAT      3720
     AGAAAATAGT GCACAAAGAA CTTCAGAAGT ATTAAAACTT CTTAAATTTC CATCGTTATT      3780
     CAAAAGCGAT TTAACAAAAT TATGCACCGA ATATAGCGAT ATTTTTGGTC TTGAAACAGA      3840
     AACCATATCA GCTAATAATT TTTACAAGCA AAAATTGAGA TTAAATGACA AAACTCCAGT      3900
     CTATATCAAA AACTATAGAA TGCCAGAAAG TCAAAAACCA GAAATTCAAA GGCAAGTTGA      3960
     CAAATTAATA AAAGATGGCA TTGTCGAACA ATCTATTTCA GAATATAATA GCCCTCTTCT      4020
     CTTGGTACCC AAGAAATCAC TGCCTAACTC GGAGGAAAAG AGATGGCGAT TAGTAGTCGA      4080
     TTATCGCCAA ATAAACAAGA AACTGCTAGC AGATAAATTC CCACTTCCAA GAATAGAAGA      4140
     CATTCTTGAT CAATTAGGCC GAGCAAAATA TTTCTCGTGC CTAGACCTGA TGTCAGGATT      4200
     TCATCAAATA GAATTAGACG AAAGGTCAAG AAATATAACA TCTTTCTCAA CTTCAACGGG      4260
     AGCATACCGC TACACGCGAT TACCATTTGG TTTAAAAATA GCCCCAAATT CTTTTCAAAG      4320
     AATGATGACC CTTGCATTTT CAGGTTTAAC GCCTTCGCAA GCATTTCTGT ATATGGATGA      4380
     TTTAGTAGTC ATAGGCTGTT CTGAAAAGCA CATGCTTAAA AATCTAACCG ACGTTTTCAA      4440
     ATTATGTAGG CAACATAATT TAAAATTACA TCCAGAAAAA TGCACTTTCT TTATGAAAGA      4500
     GGTTACTTAT TTAGGTCACA AGTGTACTGA CAAAGGTATA TTGCCAGATG ACTCTAAATA      4560
     TGAGGTAATA AAGAACTACC CCAAACCAGT AAACGCAGAC GAAGCTAGAC GCTTCGTGGC      4620
     ATTTTGCAAT TATTACAGAA GATTTATTAA GAACTTTTCT GAGAAATCAC GCCACTTAAC      4680
     GAGGCTTTGT AAAAAGAATG TTCCATTTGA ATGGACAAGC GAATGCAATG ATGTATTCGA      4740
     ATATCTCAAA AGGAAATTAA TGAAACCAAC ACTCCTTCAG TACCCAGATT TCAGCAAACA      4800
     ATTTTGCATA ACCACAGATG CTAGTAAACA AGCATGTGGA GCGGTACTAT CTCAAGACCA      4860
     TAACGGTCAA CAGCTACCAG TGGCATACGC TTCAAGAAGC TTTACAAAAG GCGAAAGTAA      4920
     TAAGTCCACT ACAGAGCAGG AGCTAGCAGC TATTCACTGG GCAATAAATC ACTTCAGACC      4980
     ATACGTATAT GGTAGACATT TCTTAGTACA AAGTGACCAT AGGCCACTAT CATATCTTTT      5040
     TTCAATGAGA AACCCCAGTT CAAAATTAAC CAGAATGAGA CTAGACTTGG AGGAGTTCGA      5100
     ATTCACAGTA GAATATCTCA AGGGGAAAGA TAATCATGTC GCAGACGCAT TGTTCCGAAT      5160
     AACAATCGGA GAACTTAAAG CAATAAATAG ACAGATACTA AAGGTAACAA CAAGATCAAC      5220
     AACAAGACAG AAAAATACCT GCGCAGGTGA AAAATTGCAT GAACCAAATG AGAAAGAAAA      5280
     TATAAAAATG CCCAATATCT ATCAGGTAAT CAATAACATT GATGCCAAAA AATATGTTAT      5340
     ACTCAAAATA GACAAGCATA AGTGTTTGTT GAAAAGAGGA AAACAAATTA TAACACGTTT      5400
     TGATATGACT AATTTTTATT CTAATGAAAT AATCGATTTA GATCAATTCT TTCAAAGGCT      5460
     TAATGAAGAA GCAAGAATAA ATAGCATCAT TCAAACACAA TTGTCACCAA GTGAACAAAT      5520
     CTTCGAATTT GTCACTATAA AGAACTTTAA AGAAAAGGGC AATAAAATAC TAAAAAATTT      5580
     AAAAATAGCG CTATTAAACA AGGTGACTAA GATAGATAAA AATGATAAGG TTCAAATAAA      5640
     AGCAATACTG TCTAAATATC ATGATGATCC ATCAGAAGGA GGCCATTCAG GAATTTCTAG      5700
     AACCCTGAGG AAAATGAAAA ACTGTTGTTG TTGGCCACGA ATGACGAAGG CGATAAGTGA      5760
     ATATGTTGAA ACATGTTTGA AATGTCAACA AGCCAAGACT ACGAAACATA CTAAAACACC      5820
     GTTGACAATA ACAGAAACGC CAGCAACAGC ATTTGATAAA GTTTTGATAG ATACCATTGG      5880
     TCCACTGCCA AGATCAGAAA ACGGAAATGA GTATGCTGTT ACTATCATTT GCGATTTAAC      5940
     AAAATATTTG GTAACGGTAC CAATTCCAAA TAAAAGTGCA AAATCAGTTG CTAAGGCTAT      6000
     ATTCGAAAAT TTTATTCTAA AGTACGGTCC AATGAAAACA ATCACAACGG ACATGGGAAC      6060
     GGAATATAAA AACCAAATTA TAGACGACCT ATGCAAATAT ATGAAGATAA AAAACATTAC      6120
     TTCAACAGCA CACCATCACC AGACATTAGG AACAGTAGAA CGAAGTCACA GAACTTTCAA      6180
     CGAGTATGTT CGCTCATATA TATCTGTTGA CAAAACCGAT TGGGATATAT GGATACAATA      6240
     TTTTACTTAT TGTTTCAACA CAACACCATC GGTAGTTCAT GAATATTGTC CATATGAATT      6300
     AGTATTTGGA AGATTACCAA GACAGTTCAT AGATTTTAAC AGGATAGACA GAATAGATCC      6360
     TATTTACAAC ATGGATGATT ATTCAAAAGA AGTTAAGCTA CGATTAGAAA TAGCATATAG      6420
     AAGAGCTAAA AATATGTTAG ACAAGGCAAA AGCCGATAGA AAGATAAAAT ATGATAGAAA      6480
     TATTAGTAAC TTTGAATTAA AGATAGGAGA TAAGATATTA CTTAAAAACG AAACGGGTCA      6540
     TAAACTTGAC AATAATTATT TAGGACCATA TTTAGTTTCA GAAATAGGAG ATAATGACAA      6600
     CATTACAATT ATAGGAAATA AAAATAAAAA ACAGATAGTC CATAAAGATA GGTTAAAAAT      6660
     TTTTAATTCA TAATACATTT TGTTTGGTTG GCCAACCACA AATAAAAAAC CACAAATAAA      6720
     AAACCACAAA TAAAAAACCA CAAATAAAAA ACCACAAATA AAAAACCACA AATAAAAAAC      6780
     CACAAATAAA AAACCACAAA TAAAAAACCA CAAATAAAAA ACCACAAATA AAAAAACCAC      6840
     AAATAAAATA AAAACCAATA AAAACATTAT AATACAAAAC TTTTACTTTG CAAAATATAA      6900
     TGAAAATATA TATATTTTTT TTAATATCTC TTTAATCATT CATTTCAAAT ATTAATGTAC      6960
     ATTTAAAAAA AAAAAAAAAA ATATTATATA CTTGAAAATA ACTTCATGTT ATTACGTTAT      7020
     TTTTCAAAAG GAGGGAGATG TAGTATATAC GAATATAATA ACAATAATAA TAACAATAAT      7080
     AATAATAATA TTAATAATAA TTATAATATG AATCATAATA ATAAGTCAAC TAATAAGTAA      7140
     ACTTAGGACC ACCCTAATTC CTTAGGGTCA CCCTAGTAGA TCTTTAGATA CACCCTAATA      7200
     CTAAATATGC GAATTCAGGA TGTACGCCTT TAGGGGTCGG ACTCGACTCC CATTGGTTAT      7260
     CGAGTATGAA CTTCATACAT ACATATTGCA GAATTTGCTA GTGTCAGCAC TTGGCTGTCA      7320
     CAAGAGATCT CCCTGTAGAC CACACTAAGA TCAGTTATAA ATCAGGAATA GATCTGGAAT      7380
     GTACACTCGC TTAATAAAAA CCAAATAAAG ATAAAATGAC CAACTGCGTT TTGAGACTTT      7440
     ATTAACTACA TCAGAAGTAT TAGAATTCAA ATTAACTACA                            7480
//
ID   DMMDG3     standard; DNA; INV; 5519 BP.
XX
AC   X95908;
XX
DR   FLYBASE; FBgn0002698; mdg3.
XX
FT   source          X95908:1..5519
FT   SO_feature      five_prime_LTR ; SO:0000425:1..267
FT   SO_feature      three_prime_LTR ; SO:0000426:5253..5519
FT   SO_feature      transcription_start_site ; SO:0000315:178
FT   SO_feature      polyA_signal_sequence ; SO:0000551:5253..5519
FT   SO_feature      CDS ; SO:0000316:296..4780
FT                   /db_xref="FLYBASE:FBgn0043882; mdg3\ORF"
FT                   /db_xref="SPTREMBL:Q94885"
FT                   /protein_id="CAA65152.1"
FT                   /translation="MDDKIILNDFSLTTLKDWLRILGQNTEGTKTELIARLQDIPTAVR
FT                   GDCPPEHPQKNAPPGNDIFSSLDFQNCEINTDHVSVNAMNRKESTETGSERETNMFELQ
FT                   QLRAELAEAKAMLNGTRSSLQFQEQQQPEQSKATVSSVIQTAQFTQAGATKENTTFHSP
FT                   QRSNERAESQRFPVDALALAKETITDYDGKTCARAWITVVKNIARTFNIDDNHLRILLI
FT                   TKLKGNAQVWLHAHPARLIEPIDNLLDQLSLTFGEQSSKAEIRRKFESRKWKTEENFCS
FT                   YYDEKMALSNGINIDDDELLDQMIEGIPLQNFRTQARIQCFSTPSEMLRAFSNIRLPAR
FT                   REPPVQPTDYKDAIRCANCNSRGHKADICKKPKREPGSCYACGQLGHLVAQCPTRKSVS
FT                   SNNYVRWFKINFFENAYKPIISECLIDSGSPISIIKKSLINETMKLALVNTCYFGLNNC
FT                   ILKTHGQTTCYVLKGSIKIYFRLIIVCDQSMRYNVILGRDFLTACNLNLDPYTLGMIAL
FT                   RKPMEINKISMFTENDSPEKSLENEIVSPKSLENEIVSSQSLENEIVSPKSLENEIVSP
FT                   KSFKNATISPKSLENKIVNQQHKETGPISLRDEIVNQQKNVSKSKLSEDEIVNTSKEIV
FT                   SFKLPKDKNVYEQLNHNFDKEVLRICHVTESELEYKIGENVSNRLQLEFDRLFRNFYIN
FT                   AKRPNEPTVRSEIQLCLKNPKPFSCSPRRLSYTEKDRLQKLLDEYLENGFIRPSDSEYA
FT                   SPIVLVKKKTGDLRMCVDFRKLNKMTMKDNYPLPLIDDLLDRMNEKTVFTKLDLKNGFF
FT                   HVHVKKESIKYTSFVTPLGQYEWLRMPFGLKNAPSVFQRFVNKIFADMIRENKVVVYMD
FT                   DILLATENINEHLETLKEIFKRLVENKLELRIDKCEFMQSSIKYLGFIINKDGIMPNDK
FT                   GIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLHDILKKDKPFKFGSEEMI
FT                   CFNMLKDKLIQSPVLAIYNHKHETELHCDASSSGFGAVLMQKKEDQKWHPVSFFSKRTT
FT                   DIESKYHSFELETLAIVYSLRRFRVYLHWRTFKIVTDCNSLILTLSKKELNPRIARWAL
FT                   EFQGYDFEIVHRAGSRMQHVDALSRCTNIMVIQTNSFEDNLVICQGKDTKLKEIRQLLE
FT                   NTENKLYEMRNGIVYKKTNENRLLFYVPIEMEEQVLYKYHNELGHVGRDKMIEAIMKNY
FT                   WFPNLKQKCSTHISNCLKCISFSPKTGKTEGFLHNIPKGNKPFEIIHIDHYGPVDLARP
FT                   KKHILVIVDAFTKFVRLYATKTTNTKEVIQSLNDYFRAYSRPKCIISDRGACFTSGDFD
FT                   SFLKECNVKHIKIATGSPQANGQVERINRSLGPMISKLIEPDQGLHWDLVLEKVEYTLN
FT                   NTLHRSIKQYPSIMLFGLQQKGQIMDELKEKIEEIGETIEERDLESIRNKGEASQKIAQ
FT                   AYNKEYVDKKRKRSGVFTKGTTSWLKILTQQQA"
XX
CC   Derived from X95908 (e990667) (Rel. 49, Last updated, Version 3).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 5519 BP;  2078 A; 1005 C; 1029 G; 1407 T; 0 other;
     TGTAGTAGGC TGCACCTTCT ACCCTCTTCC TTTACTCTTA GTCATACATA CCTAATTATA        60
     CATAGCCAAT CTAGTCATAA GCTTATACAC TCATACACCC ATCCTTAACA TACAAATATT       120
     ATCGAGAAAC TTATCGACTA ATCGACTCGC CACTCTGCAG AGAGCGCGGC AGTCAGTCGC       180
     TGTTGAACCA AGCTAAAGGA CAGATCAAAA ATAAAAGAGA CACGTGAAAT TGTATTAGAA       240
     TATTAACTTC TGTAAACGGC GGCTAAAATC TCAGAAGTGG GATTAATAAT CCAAAATGGA       300
     CGATAAAATC ATCCTGAACG ACTTTTCGCT GACAACCCTA AAAGATTGGC TACGTATTCT       360
     GGGCCAAAAT ACGGAGGGCA CAAAAACCGA ATTAATCGCG AGGCTGCAAG ACATCCCAAC       420
     GGCAGTTCGG GGCGATTGTC CACCGGAGCA CCCCCAGAAA AACGCTCCAC CAGGAAACGA       480
     CATTTTTTCT TCACTGGATT TTCAGAATTG TGAAATTAAC ACCGATCACG TAAGTGTGAA       540
     TGCGATGAAC AGAAAAGAAT CAACCGAAAC TGGCAGTGAG AGGGAGACAA ACATGTTCGA       600
     GCTACAGCAA CTACGCGCAG AGCTAGCAGA AGCGAAGGCA ATGCTTAACG GAACACGATC       660
     GAGCTTGCAG TTCCAAGAAC AACAACAACC AGAGCAAAGC AAGGCTACAG TTAGTTCCGT       720
     TATCCAGACG GCGCAGTTTA CGCAGGCTGG CGCCACAAAA GAGAACACAA CATTTCACTC       780
     GCCGCAGCGA TCCAACGAGA GAGCGGAGAG CCAGCGTTTT CCAGTTGATG CTCTCGCTCT       840
     CGCCAAAGAG ACGATAACCG ATTACGATGG GAAAACTTGC GCGCGTGCCT GGATAACAGT       900
     GGTCAAAAAT ATCGCACGCA CTTTCAACAT CGATGACAAC CATTTACGCA TCTTACTCAT       960
     CACTAAACTT AAAGGAAACG CGCAAGTCTG GTTACATGCG CACCCTGCTC GATTGATCGA      1020
     ACCAATTGAC AATTTGCTTG ATCAATTGTC ATTGACTTTT GGCGAGCAAT CATCCAAGGC      1080
     TGAGATCCGG CGAAAATTCG AGAGTCGCAA GTGGAAAACC GAGGAGAATT TCTGCAGTTA      1140
     TTACGACGAG AAGATGGCTC TCTCAAACGG GATAAACATC GACGACGACG AACTACTGGA      1200
     CCAGATGATA GAGGGCATAC CGCTACAAAA TTTCCGTACC CAAGCACGGA TTCAATGCTT      1260
     CTCTACTCCA TCGGAGATGC TACGCGCATT TTCGAACATC CGTTTGCCAG CTCGGAGGGA      1320
     GCCACCTGTA CAGCCAACCG ACTACAAAGA TGCCATACGA TGCGCAAACT GTAATTCAAG      1380
     AGGACACAAA GCTGACATCT GCAAGAAGCC CAAACGTGAA CCAGGTTCGT GCTACGCCTG      1440
     TGGACAACTT GGACACCTGG TGGCACAATG TCCCACAAGG AAGAGCGTTT CATCTAATAA      1500
     TTATGTAAGA TGGTTTAAAA TTAATTTTTT TGAAAATGCT TATAAGCCCA TAATTTCAGA      1560
     ATGCCTCATA GACTCTGGCA GTCCTATATC TATCATTAAA AAGTCACTTA TTAACGAGAC      1620
     AATGAAGTTA GCCCTAGTTA ATACTTGCTA TTTTGGTTTA AACAACTGTA TTCTCAAAAC      1680
     ACATGGACAA ACCACATGTT ATGTTTTGAA AGGATCAATA AAAATATATT TTCGTTTAAT      1740
     CATTGTTTGC GACCAGTCTA TGAGGTATAA TGTTATTCTC GGCAGAGATT TTTTAACTGC      1800
     ATGCAATTTA AATTTAGACC CGTACACCTT GGGAATGATT GCGTTGAGAA AACCCATGGA      1860
     AATAAACAAA ATATCAATGT TTACTGAAAA TGATAGTCCT GAGAAATCTT TAGAAAATGA      1920
     AATTGTTAGT CCAAAATCGT TAGAGAATGA AATTGTTAGT TCACAATCGT TAGAAAATGA      1980
     AATTGTTAGC CCCAAATCGT TAGAGAATGA AATTGTTAGT CCAAAATCGT TTAAAAATGC      2040
     AACTATTAGT CCGAAATCGT TAGAAAATAA AATCGTTAAT CAACAGCATA AAGAAACTGG      2100
     TCCAATATCG TTAAGAGATG AAATAGTTAA TCAACAAAAG AATGTCAGTA AATCAAAATT      2160
     ATCAGAAGAT GAAATTGTTA ACACTTCAAA AGAAATCGTT AGTTTTAAAT TGCCAAAAGA      2220
     TAAAAACGTT TACGAACAAT TAAATCACAA CTTTGATAAG GAAGTACTAA GAATATGTCA      2280
     TGTAACTGAA AGTGAGTTAG AATACAAAAT AGGAGAAAAT GTTAGCAATA GGTTACAACT      2340
     AGAATTCGAT AGGTTGTTTA GAAATTTTTA TATAAATGCA AAAAGGCCAA ATGAACCGAC      2400
     AGTTAGAAGT GAAATACAAT TGTGTTTGAA AAACCCGAAA CCGTTTAGCT GTTCTCCTAG      2460
     GAGGCTTTCA TACACAGAAA AAGACAGGTT ACAAAAACTA TTAGACGAAT ATTTGGAAAA      2520
     CGGATTTATA CGACCAAGCG ACTCGGAATA TGCATCGCCT ATTGTTTTAG TGAAAAAGAA      2580
     AACTGGAGAC TTACGTATGT GCGTCGACTT TAGAAAACTT AATAAAATGA CAATGAAAGA      2640
     CAACTATCCT CTACCTCTTA TAGATGACTT GTTAGATAGA ATGAATGAGA AAACTGTTTT      2700
     CACCAAACTC GATCTTAAAA ACGGTTTTTT CCACGTGCAT GTTAAAAAAG AATCAATAAA      2760
     ATACACCTCT TTCGTTACAC CATTAGGCCA ATACGAGTGG CTGCGAATGC CATTTGGCCT      2820
     CAAAAACGCC CCGTCTGTGT TCCAAAGATT TGTTAACAAA ATTTTTGCGG ATATGATTAG      2880
     AGAAAACAAA GTAGTAGTAT ATATGGACGA CATTCTATTG GCAACCGAAA ATATAAACGA      2940
     ACACTTAGAA ACGTTGAAAG AAATTTTTAA AAGATTAGTT GAAAATAAAC TTGAATTAAG      3000
     AATAGACAAA TGTGAGTTTA TGCAATCAAG TATAAAATAT CTTGGGTTCA TAATAAATAA      3060
     AGACGGCATA ATGCCCAATG ACAAAGGAAT CGAGGCAATA AAAAATTTCC CAATACCTAA      3120
     TAATGTTCAT ACAGTACAAA GTTTTTTGGG ATTATGCTCA TATTTTCGAC GGTTTATAAA      3180
     AGATTTTTCT AGACTAGCTA AACCATTGCA TGACATTCTA AAAAAAGATA AACCGTTCAA      3240
     ATTTGGTAGT GAAGAAATGA TTTGTTTTAA TATGTTAAAA GATAAATTAA TACAGTCACC      3300
     GGTCTTAGCT ATATACAACC ATAAACACGA AACAGAATTG CATTGTGATG CAAGTTCTTC      3360
     TGGATTCGGT GCTGTACTTA TGCAAAAGAA GGAGGACCAG AAATGGCACC CAGTTTCATT      3420
     CTTTTCAAAA CGGACAACAG ATATTGAATC AAAATACCAC AGTTTCGAGT TAGAAACTTT      3480
     AGCCATTGTT TATTCGTTAC GTAGATTTAG AGTTTATCTT CATTGGAGGA CATTTAAAAT      3540
     AGTCACCGAC TGCAACTCAT TAATTTTGAC CCTAAGCAAA AAAGAGCTAA ACCCTAGGAT      3600
     AGCCAGGTGG GCTTTAGAAT TCCAAGGTTA TGATTTTGAA ATTGTGCATA GGGCAGGTAG      3660
     CCGCATGCAA CATGTTGACG CACTGAGTAG GTGTACAAAT ATTATGGTAA TACAAACAAA      3720
     CAGTTTCGAA GATAATCTAG TTATATGTCA AGGGAAAGAT ACAAAATTAA AAGAAATCAG      3780
     GCAATTGTTA GAAAACACAG AAAATAAATT GTATGAGATG AGAAATGGTA TAGTTTACAA      3840
     AAAGACAAAT GAAAATAGAT TGCTGTTCTA CGTTCCGATA GAAATGGAAG AACAAGTGTT      3900
     ATACAAATAT CACAACGAAC TTGGACACGT AGGAAGAGAC AAAATGATAG AAGCTATAAT      3960
     GAAAAACTAT TGGTTTCCAA ATTTAAAACA GAAGTGTAGC ACACATATCA GCAACTGTTT      4020
     AAAATGTATT TCATTCAGTC CCAAAACAGG AAAAACAGAA GGATTTCTAC ACAACATACC      4080
     TAAGGGAAAC AAACCTTTTG AAATAATCCA TATTGACCAT TATGGTCCAG TAGACTTGGC      4140
     TAGACCGAAG AAACATATTC TAGTGATAGT AGATGCATTC ACAAAGTTTG TCAGACTATA      4200
     CGCAACAAAA ACTACGAACA CAAAAGAAGT CATACAATCG TTAAATGACT ACTTCAGAGC      4260
     ATACAGTAGG CCTAAGTGTA TCATATCAGA TAGAGGAGCA TGTTTCACGT CTGGCGATTT      4320
     TGACTCATTT TTGAAAGAAT GCAATGTTAA ACACATAAAA ATTGCAACAG GATCGCCACA      4380
     AGCCAACGGT CAAGTTGAAC GTATAAACCG AAGTCTTGGT CCAATGATTA GCAAGTTAAT      4440
     TGAACCTGAT CAAGGTCTAC ACTGGGACTT AGTCTTAGAA AAGGTCGAAT ATACCCTGAA      4500
     CAATACACTA CACCGCAGCA TTAAACAGTA TCCTAGCATA ATGTTATTTG GGTTACAACA      4560
     AAAAGGACAA ATTATGGATG AGTTAAAAGA AAAAATTGAG GAAATTGGAG AAACGATTGA      4620
     AGAAAGAGAT TTAGAAAGTA TTAGAAATAA AGGCGAGGCA AGTCAGAAAA TAGCACAAGC      4680
     ATACAATAAA GAATATGTTG ACAAAAAACG AAAACGATCA GGAGTGTTCA CAAAAGGCAC      4740
     TACGTCATGG TTAAAAATTT TGACTCAACA ACAGGCATAG CTAAGAAGTT AATTCCAAAG      4800
     CATAAAGGAC CCTATGTCAT AAGCAAAGTT CTCAAAAATG ATCGCTTCCT TCTGGAAGAT      4860
     GTTGATGGAT TTCAAATTTC TCGCAATCCT TACCGGGGTG TATGGAGCAT ACAGAATATA      4920
     AAACACTGGC AAAGAAAAAT TAAGAGTCTA CAAAATAGAA AGTATAATTT GAGAAACTCT      4980
     GTACAAAATA GAAAGTATAA TTTGAGAAAC TCTGTACAAA ATAGAAAGTA TAATTTAAGA      5040
     AACTCTGTAC GAAATCGAAA GTATAATTTA AGAAGCAATT GTAAAACAAA GAAAACAAAC      5100
     AAGAAGAAAA GAAAACCAAA AAAATGTTTA AGACCGTTCA AAAGTATCTC CACTAAGAAG      5160
     AATAAAATAA GAAACAGGAC CCTTAGCTTT AAGAAACGTT AATTGTTATA AAATCCTACG      5220
     ATCGGGAGAT CTAGTTGTCA GGACGGCCGA GTTGTAGTAG GCTGCTCCTT CTACCCTCTT      5280
     CCTTTACTCT TAGTCATACA TACCTAATTA TACATAGCCA ATCTAGTCAT AAGCTTATAC      5340
     ACTCATACAC CCATCCTTAA CATACAAATA TTATCGAGAA ACTTATCGAC TAATCGACTC      5400
     GCCACTCTGC AGAGAGCGCG GCAGTCAGTC GCTGTTGAAC CAAGCTAAAG GACAGATCAA      5460
     AAATAAAAGA GACACGTGAA ATTGTATTAG AATATTAACT TCTGTAAACG GCGGCTAAA       5519
//
ID   DMDM11     standard; DNA; INV; 5461 BP.
XX
AC   X14037;
AC   X15066;
XX
DR   FLYBASE; FBgn0002745; micropia.
XX
FT   source          join(X14037:5..3664,X15066:3534..3593,X14037:3721..5461)
FT   SO_feature      five_prime_LTR ; SO:0000425:1..476
FT   SO_feature      three_prime_LTR ; SO:0000426:4957..5461
FT   SO_feature      primer_binding_site ; SO:0005850:477..489
FT                   /bound_moiety="tRNA-leu"
FT   SO_feature      primer_binding_site ; SO:0005850:4939..4956
FT   SO_feature      CDS ; SO:0000316:540..4415
FT                   /db_xref="FLYBASE:FBgn0043876; micropia\polyprotein"
FT                   /translation="
FT                   MQNRNLAELVKIMQKTPAREQQPSYDVKLPKFNPDAACVEAAKWCSTTDI
FT                   ILTEHPLKGSKLITALSNCMEGTASQWLTQISYQGMTWQEFQELFLQRFE
FT                   TEETPAATFLNLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTT
FT                   VLAHMANIDSRLQRVLFTSNVRTRSKLQAELKAFTFDKKRHARDDNLGPD
FT                   QKNRKASPVVCHFCSKPGRRIAECRSKMRQDRRAKPQREKSNVTCYRCGQ
FT                   PGHFSNQCPKNGTAAKQDVTQQKTVNQCCVTEPKGSLHQRGEIYPICFDS
FT                   GAECSLIKDDISSKLSGKRINNTVMIKGIGGGSVCSTLQILSEVTINENI
FT                   MEILFHVVPNEEMRNDILIGREILKQGFYVILTSDNFKVVKSKTVNNCSV
FT                   TERSFTLSDIDTELVDNEKAQLIELLEKHSTSFTNGIPHTRVNTGEMKIR
FT                   LIDPTKTVQRRPYRLSPEEREVVRMQVSELIRCNIVRPSCSPFASPMLLV
FT                   KKKNGTDRLCVDFRELNSNTISDKYPLPLISDQIARLRGANYFTCLDMAS
FT                   GFHQIPIHPESVEYTAFVPDGLKNAPSVFQRTVINALGDLANSFVIVYMD
FT                   DIMVVSPTKELALERLKTVLNVLTKAGFTFNLAKCSFLKTTVQYLGYEVR
FT                   AGEIRPNVRKIASLSSLPPPQTVSGVRQFIGLASYFRKFVSGFSQLMKPL
FT                   YSLSSGSGKITWSAELEEIRLKVVTILTNEPALVIFDPQYPIELHTDASA
FT                   CGYGAILLHRIESKPHVIEYFSKTTTSVESRYHSYELETLAVVKAVKHFR
FT                   HYLIGREFVVYTDCNSLKASRTKIDLTPRVHRWWAYLQSFNFEIQYREGK
FT                   RMAHVDFLSRNPLSPEHILSINKIPEKRVNLSEISSTWLLAEQRLDLEII
FT                   EIVNKLESDELAENLAKTYDLRKGVLYRKVQRRGRTSYLPVVPRAFKWSV
FT                   INQVHESIMHLGWQKTLDKVYQYYWFAKMNKYVRKFVSNCITCRSVKSSS
FT                   GKVQAELHSIPKTSIPWHTIHIDITGKLSGKSDLKEYVIVQIDAYTKFVY
FT                   LYHTLKIDAESCVNAMKSSISLFGVPDRIIADQGRCFTSSKFSEFCVSQK
FT                   VELHLIATGMSRANGQVERVMETLKNLLSVVESSQRSWQDALGEVQLALN
FT                   CTISRATDASPLEMLIGKQARPLGLVPPCETECEIDLATVRAHATENMNS
FT                   LASYDKSRFDSSRAAVDKHHVGDYVLLRNEERHQTKLDPKFRGPFLVTEV
FT                   LEGDRYTLKSLTSNRSFKYCHESIKMPDAEIPNELNENVEQ"
XX
CC   Sequence assembled by Lynn Crosby (FlyBase), 'micropia.v006'.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 5461 BP; 1679 A; 1051 C; 1264 G; 1467 T; 0 other;
     TGTCGTGGCG AAAATAATGA GTATGCGTGT AGTCGCTGTT TACTTCTTCT CCATGTTCCC        60
     TTTGCTATTA TGCGTGTTCC TATTTATGAA CACGTGGCGA AAATAATAAA TGCGTGTAGT       120
     CGCCGTTTAC TTCTTCTCCA TGTTCCCTTT GCTATTATGC GTGTTCCTAT TTATTGTCAA       180
     TGTGTGAGGA TGAATAGATG AATTATCTAT GAACGGGATT TTGCAAAAAC GACTTGCGCT       240
     GCTTGGTTAG AAAGGGAAAA CTATATAATG AAAAGGGAAT GCCAAAAATT GAGAAGAGAC       300
     AAAGCAGGCT GCACGAAGCT GGAGTGAGGG CATTAATCGT GGAGAAGCCA AAGCAGACGC       360
     AAGTGGACTC GTTGACTGCG CACAGCTGCA TAAAATTATA TAGTAAAAAG AGATTTGAGC       420
     GACGCTGATA TGGACGGACG GACGGACGCG AGGCCCCTGA TATTCTTAAC CCGACATCAG       480
     AAGTGGGATC TGTGCCACAC CCTGCATTTT CTGAGGATCA GTGGCGTGCA GTAGTGGAAA       540
     TGCAAAATCG GAATTTGGCT GAACTTGTAA AAATCATGCA AAAGACGCCG GCACGTGAGC       600
     AGCAACCTAG TTATGATGTT AAGCTACCCA AATTTAACCC TGATGCTGCA TGCGTAGAGG       660
     CAGCAAAGTG GTGTTCAACA ACCGATATAA TTCTAACTGA GCACCCCCTT AAAGGAAGTA       720
     AATTGATCAC GGCACTAAGT AACTGCATGG AGGGAACTGC ATCTCAGTGG CTAACACAAA       780
     TCTCGTACCA GGGTATGACT TGGCAAGAGT TCCAGGAATT ATTTCTGCAG CGCTTTGAAA       840
     CCGAAGAGAC GCCGGCCGCT ACGTTTTTAA ATTTACTCAA CAGCCGCCCG ACTGCCGCCG       900
     AATGTTACGC GGTGTATGCG AGTCGGCTGG TGACGCAGCT GACTACAAAG TGGCGGAATA       960
     TGGAAATAGA AGAAATTGCC GTTACAACTG TTCTTGCGCA TATGGCAAAC ATTGACAGTC      1020
     GTTTGCAGCG CGTCCTCTTC ACATCCAATG TGCGTACCAG AAGTAAGCTA CAGGCGGAGT      1080
     TAAAAGCGTT TACGTTCGAC AAGAAGCGAC ATGCTCGAGA TGACAACCTT GGACCTGACC      1140
     AGAAGAACCG TAAGGCATCG CCAGTTGTAT GCCACTTCTG TTCAAAGCCG GGACGTCGAA      1200
     TTGCTGAATG CCGAAGTAAA ATGCGACAAG ATAGACGGGC GAAACCGCAG CGTGAAAAAT      1260
     CAAATGTTAC GTGCTATCGG TGCGGCCAAC CGGGACATTT CTCCAACCAG TGCCCGAAAA      1320
     ACGGAACTGC AGCCAAACAA GATGTGACTC AACAGAAGAC TGTTAACCAA TGTTGTGTGA      1380
     CTGAGCCAAA GGGAAGCTTG CATCAACGAG GTGAGATCTA TCCAATTTGT TTCGATTCCG      1440
     GTGCAGAGTG CTCCCTTATT AAAGACGACA TTAGCAGTAA GTTATCTGGT AAACGTATAA      1500
     ACAATACTGT AATGATAAAA GGCATTGGTG GTGGCAGTGT GTGCAGTACA TTGCAAATCT      1560
     TGAGTGAAGT CACTATAAAC GAAAATATTA TGGAAATATT ATTTCATGTA GTCCCGAACG      1620
     AGGAAATGAG GAATGATATT CTGATAGGGC GAGAAATACT TAAACAAGGC TTTTATGTAA      1680
     TTTTGACATC CGATAATTTT AAAGTTGTAA AATCAAAAAC TGTTAATAAT TGTTCCGTTA      1740
     CTGAGCGATC GTTTACTTTG TCCGATATTG ACACCGAATT AGTCGACAAT GAGAAAGCTC      1800
     AATTAATTGA GTTACTTGAA AAGCACTCGA CTTCATTTAC CAACGGGATA CCTCATACTC      1860
     GAGTAAATAC AGGCGAAATG AAAATCCGTT TGATTGATCC AACTAAAACT GTTCAGCGCC      1920
     GACCTTACAG ACTTAGCCCC GAAGAGAGAG AAGTAGTGCG AATGCAGGTG AGCGAATTGA      1980
     TAAGATGTAA TATTGTTCGC CCAAGTTGCT CTCCCTTTGC TAGCCCCATG TTGCTCGTCA      2040
     AAAAGAAGAA CGGAACCGAC CGTCTATGTG TTGATTTTAG AGAGCTAAAC TCGAACACGA      2100
     TTTCGGATAA ATACCCCTTG CCGCTTATCA GCGATCAAAT TGCTAGACTT CGCGGAGCAA      2160
     ATTATTTCAC ATGCCTGGAT ATGGCAAGTG GTTTCCACCA AATCCCGATT CACCCTGAAT      2220
     CCGTGGAATA TACTGCATTT GTGCCCGACG GCCTCAAAAA TGCGCCATCT GTTTTCCAGC      2280
     GCACAGTCAT AAATGCACTT GGTGACCTTG CTAACTCTTT TGTAATCGTT TACATGGACG      2340
     ACATAATGGT AGTATCGCCA ACCAAGGAAT TGGCTTTGGA AAGGTTAAAA ACTGTTTTGA      2400
     ATGTTCTTAC AAAGGCTGGT TTTACCTTTA ACCTTGCTAA ATGCAGTTTT CTCAAAACAA      2460
     CGGTTCAGTA TTTAGGCTAT GAAGTGCGAG CGGGAGAAAT TCGTCCGAAT GTGCGAAAGA      2520
     TAGCTTCTTT AAGCTCCTTG CCTCCTCCTC AAACTGTCTC CGGCGTTAGA CAATTCATTG      2580
     GCTTGGCCTC TTACTTTCGC AAATTCGTGT CTGGATTCTC CCAACTTATG AAACCATTGT      2640
     ATTCACTTTC GTCTGGTAGC GGCAAGATTA CATGGAGCGC TGAGCTGGAA GAGATCAGAC      2700
     TTAAAGTTGT GACGATCCTC ACAAATGAGC CTGCTCTGGT AATCTTCGAC CCGCAATATC      2760
     CTATTGAGTT GCACACTGAT GCAAGTGCCT GTGGATATGG AGCGATACTT TTGCACCGTA      2820
     TAGAAAGTAA GCCCCATGTA ATCGAATACT TCAGCAAAAC AACTACCTCT GTTGAATCTA      2880
     GATATCACTC CTACGAGCTG GAAACCTTGG CAGTGGTAAA AGCCGTTAAA CATTTTCGCC      2940
     ATTACCTAAT TGGCCGTGAG TTCGTTGTCT ATACAGACTG CAATTCATTA AAAGCTTCTC      3000
     GCACAAAAAT AGATTTAACC CCCAGAGTTC ACCGCTGGTG GGCCTACTTA CAATCGTTTA      3060
     ATTTCGAAAT TCAGTATAGA GAGGGTAAGC GTATGGCTCA TGTGGATTTC CTATCAAGAA      3120
     ATCCTTTATC ACCCGAACAC ATTTTGTCAA TAAACAAGAT TCCCGAAAAA CGAGTAAATC      3180
     TGTCTGAAAT TTCAAGTACT TGGCTTCTTG CTGAGCAACG GTTAGACCTT GAGATAATAG      3240
     AAATTGTTAA CAAATTGGAG TCAGATGAAT TAGCCGAAAA CTTGGCCAAA ACGTATGATT      3300
     TGCGAAAAGG TGTATTATAT CGCAAGGTCC AAAGACGAGG TAGAACAAGT TATTTACCAG      3360
     TTGTACCCAG AGCTTTCAAA TGGTCAGTAA TTAACCAGGT ACACGAGTCG ATAATGCATT      3420
     TAGGGTGGCA AAAGACACTT GATAAAGTGT ACCAGTATTA TTGGTTCGCT AAAATGAACA      3480
     AGTATGTTCG AAAATTTGTT TCAAACTGCA TAACTTGTAG ATCAGTGAAA TCATCTTCCG      3540
     GGAAGGTTCA GGCGGAACTT CATTCCATTC CGAAGACAAG TATACCGTGG CACACCATCC      3600
     ACATAGATAT AACGGGGAAA TTAAGTGGCA AGAGCGATTT GAAGGAGTAT GTCATTGTTC      3660
     AGATCGATGC CTATACAAAG TTTGTTTATC TGTATCACAC CTTAAAGATA GATGCCGAAA      3720
     GCTGTGTTAA TGCTATGAAA TCTTCCATAT CCTTATTTGG AGTACCAGAT CGCATTATCG      3780
     CCGACCAGGG CAGATGTTTT ACTAGCTCTA AGTTTTCAGA GTTTTGCGTA TCGCAGAAAG      3840
     TTGAACTTCA CTTGATTGCT ACGGGAATGA GCCGTGCAAA TGGGCAAGTG GAACGGGTGA      3900
     TGGAAACACT GAAAAATTTG TTGTCAGTGG TAGAATCAAG TCAACGATCG TGGCAGGACG      3960
     CACTTGGCGA AGTCCAACTT GCACTGAATT GTACAATTTC TCGTGCCACT GATGCAAGTC      4020
     CGTTAGAAAT GTTAATTGGT AAACAGGCTC GACCCCTTGG ATTAGTTCCC CCATGTGAGA      4080
     CCGAATGTGA AATAGATTTG GCAACTGTTA GAGCTCATGC GACAGAAAAT ATGAATTCCT      4140
     TAGCGTCTTA CGACAAATCC CGATTTGATA GCAGTAGAGC AGCCGTTGAC AAACACCACG      4200
     TAGGTGACTA TGTGCTATTG AGGAATGAAG AAAGACACCA AACTAAGTTA GATCCGAAAT      4260
     TCAGAGGACC GTTTTTGGTA ACTGAAGTAT TAGAGGGTGA CAGGTATACA CTAAAGTCGT      4320
     TGACGAGTAA CCGATCGTTC AAGTATTGCC ATGAATCAAT CAAAATGCCG GATGCAGAAA      4380
     TCCCGAATGA GTTAAACGAG AATGTAGAGC AATAGCTGAA ATATAGAAAC AGTTGAATGA      4440
     AAAGAAAAGC CCGCCAATGA GTTCTTTTGT GAACGAGAGA TATCCGTCTA GGTGAGACGA      4500
     TGAATTGTGA GTTATCCGTC TAGGTGAGAC GATGAATTGT GAGTTATCCG TCTAGGTGAG      4560
     ACGATGAATT GTCAGTTATC CGTCAGGTGA GACGATGAAT TGTGAGTTAT CCGTCCAGGA      4620
     GAGACGATGA GTTTGGATTG AATTAATAAT CAAGTGTGTG TGAACTGGCG GAAGATCGAT      4680
     ATATAGAAAT CGATAAATGA TAATGTTAAG ATAAGTTGTG AGCTGATGTA TTACTGATCA      4740
     ATGGAACTGA ATATGAAAAT AGAATAAGTT ATCCCAGCAA CAGTGAAATA AGAGCTGTTT      4800
     TGTTTCTTCA CAGAATTAAG ATTTAAGAAA TACACCTGAT AAAGTCAAAC TAATGAAATT      4860
     AAATGTTATT GAATAGTGAT GAAAGTAGGT GATCTTGATA TCTTGGTATC TCGGTATCAA      4920
     AAGCTTACAC GAGGACGTGA AATGTCAGAA TGGCCGTGTC GTGGCGAAAA TAATGAGTAT      4980
     GCGTGTAGTC GCTGTTTACT TCTTCTCCAT GTTCCCTTTG CTATTATGCG TGTTCCTATT      5040
     TATGAACACG TGGCGAAAAT AATGAATGCG CGTAGTCCGG TTTACTTCTT CTCCATGTTC      5100
     CCTTTGCTAT TATGCGTGTT CCTATTTATT GTCAATGTGT GAGGATGAAT AGATGAATTA      5160
     TCTATGAACG GGATTTTGCA AAAACGAGAG CGATAGAGCT GTTGCTGAAC GTGGCCACTT      5220
     GCGCTGCTTG GTTAGAAAGG GAAAACTATA TAATGAAAAG GGAATGCCAA AAATTGAGAA      5280
     GAGACAAAGC AGGCTGCACG AAACTGGAGT GAGGGCATTA ATCGTGGAGA AGCCAAAGCA      5340
     GACGCAAGTG GACTCGTTGA CTGCGCACAG CTGCATAAAA TTATATAGTA AAAAGAGATT      5400
     TGAGCGACGC TGATATGGAC GGACGGACGG ACGCGAGGCC CCTGATATTC TTAACCCGAC      5460
     A                                                                      5461
//
ID   PPI251     standard; DNA; SYN; 2907 BP.
XX
AC   X06779; V01520; X69493;
XX
DR   FLYBASE; FBgn0003055; P-element.
XX
FT   source          X06779:996..3902
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..31
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:2877..2907
FT   SO_feature      CDS ; SO:0000316:join(153..442,501..1168,1222..1947,2138..2709)
FT                   /db_xref="FLYBASE:FBgn0013311; P\T"
FT                   /translation="
FT                   MKYCKFCCKAVTGVKLIHVPKCAIKRKLWEQSLGCSLGENSQICDTHFND
FT                   SQWKAAPAKGQTFKRRRLNADAVPSKVIEPEPEKIKEGYTSGSTQTESCS
FT                   LFNENKSLREKIRTLEYEMRRLEQQLRESQQLEESLRKIFTDTQIRILKN
FT                   GGQRATFNSDDISTAICLHTAGPRAYNHLYKKGFPLPSRTTLYRWLSDVD
FT                   IKRGCLDVVIDLMDSDGVDDADKLCVLAFDEMKVAAAFEYDSSADIVYEP
FT                   SDYVQLAIVRGLKKSWKQPVFFDFNTRMDPDTLNNILRKLHRKGYLVVAI
FT                   VSDLGTGNQKLWTELGISESKTWFSHPADDHLKIFVFSDTPHLIKLVRNH
FT                   YVDSGLTINGKKLTKKTIQEALHLCNKSDLSILFKINENHINVRSLAKQK
FT                   VKLATQLFSNTTASSIRRCYSLGYDIENATETADFFKLMNDWFDIFNSKL
FT                   STSNCIECSQPYGKQLDIQNDILNRMSEIMRTGILDKPKRLPFQKGIIVN
FT                   NASLDGLYKYLQENFSMQYILTSRLNQDIVEHFFGSMRSRGGQFDHPTPL
FT                   QFKYRLRKYIIARNTEMLRNSGNIEEDNSESWLNLDFSSKENENKSKDDE
FT                   PVDDEPVDEMLSNIDFTEMDELTEDAMEYIAGYVIKKLRISDKVKENLTF
FT                   TYVDEVSHGGLIKPSEKFQEKLKELECIFLHYTNNNNFEITNNVKEKLIL
FT                   AARNVDVDKQVKSFYFKIRIYFRIKYFNKKIEIKNQKQKLIGNSKLLKIK
FT                   L"
FT   SO_feature      CDS ; SO:0000316:join(153..442,501..1168,1222..1994)
FT                   /db_xref="FLYBASE:;"
FT                   /translation="
FT                   MKYCKFCCKAVTGVKLIHVPKCAIKRKLWEQSLGCSLGENSQICDTHFND
FT                   SQWKAAPAKGQTFKRRRLNADAVPSKVIEPEPEKIKEGYTSGSTQTESCS
FT                   LFNENKSLREKIRTLEYEMRRLEQQLRESQQLEESLRKIFTDTQIRILKN
FT                   GGQRATFNSDDISTAICLHTAGPRAYNHLYKKGFPLPSRTTLYRWLSDVD
FT                   IKRGCLDVVIDLMDSDGVDDADKLCVLAFDEMKVAAAFEYDSSADIVYEP
FT                   SDYVQLAIVRGLKKSWKQPVFFDFNTRMDPDTLNNILRKLHRKGYLVVAI
FT                   VSDLGTGNQKLWTELGISESKTWFSHPADDHLKIFVFSDTPHLIKLVRNH
FT                   YVDSGLTINGKKLTKKTIQEALHLCNKSDLSILFKINENHINVRSLAKQK
FT                   VKLATQLFSNTTASSIRRCYSLGYDIENATETADFFKLMNDWFDIFNSKL
FT                   STSNCIECSQPYGKQLDIQNDILNRMSEIMRTGILDKPKRLPFQKGIIVN
FT                   NASLDGLYKYLQENFSMQYILTSRLNQDIVEHFFGSMRSRGGQFDHPTPL
FT                   QFKYRLRKYIIGMTNLKECVNKNVIP"
FT   SO_feature      intron ; SO:0000188:443..500
FT   SO_feature      intron ; SO:0000188:1169..1221
FT   SO_feature      intron ; SO:0000188:1948..2137
XX
CC   Derived from X06779 (g58305) (Rel. 49, Last updated, Version 8).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
CC   CDS annotation from Lynn Crosby's annotation 'P-element.v010'.
XX
SQ   Sequence 2907 BP;  989 A; 491 C; 582 G; 845 T; 0 other;
     CATGATGAAA TAACATAAGG TGGTCCCGTC GAAAGCCGAA GCTTACCGAA GTATACACTT        60
     AAATTCAGTG CACGTTTGCT TGTTGAGAGG AAAGGTTGTG TGCGGACGAA TTTTTTTTTG       120
     AAAACATTAA CCCTTACGTG GAATAAAAAA AAATGAAATA TTGCAAATTT TGCTGCAAAG       180
     CTGTGACTGG AGTAAAATTA ATTCACGTGC CGAAGTGTGC TATTAAGAGA AAATTGTGGG       240
     AGCAGAGCCT TGGGTGCAGC CTTGGTGAAA ACTCCCAAAT TTGTGATACC CACTTTAATG       300
     ATTCGCAGTG GAAGGCTGCA CCTGCAAAAG GTCAGACATT TAAAAGGAGG CGACTCAACG       360
     CAGATGCCGT ACCTAGTAAA GTGATAGAGC CTGAACCAGA AAAGATAAAA GAAGGCTATA       420
     CCAGTGGGAG TACACAAACA GAGTAAGTTT GAATAGTAAA AAAAATCATT TATGTAAACA       480
     ATAACGTGAC TGTGCGTTAG GTCCTGTTCA TTGTTTAATG AAAATAAGAG CTTGAGGGAA       540
     AAAATTCGTA CTTTGGAGTA CGAAATGCGT CGTTTAGAGC AGCAGCTGAG GGAGTCTCAA       600
     CAGTTGGAGG AGTCTCTACG CAAAATCTTC ACGGACACGC AGATACGGAT ACTGAAGAAT       660
     GGTGGACAAA GAGCTACGTT CAATTCCGAC GACATTTCTA CAGCTATTTG TCTCCACACC       720
     GCAGGCCCTC GAGCGTATAA CCATCTGTAC AAAAAAGGAT TTCCTTTGCC CAGTCGTACG       780
     ACTTTGTACA GATGGTTATC AGATGTGGAC ATAAAAAGAG GATGTTTGGA TGTGGTCATA       840
     GACCTAATGG ACAGTGATGG AGTTGATGAC GCCGACAAGC TTTGCGTACT CGCTTTCGAC       900
     GAGATGAAGG TCGCTGCTGC CTTCGAGTAT GACAGCTCTG CTGATATTGT TTACGAGCCA       960
     AGCGACTATG TCCAACTGGC TATTGTTCGT GGTCTAAAAA AATCGTGGAA GCAGCCAGTT      1020
     TTTTTCGATT TTAATACCCG AATGGACCCG GATACTCTTA ACAATATATT AAGGAAACTG      1080
     CATAGGAAAG GATATTTAGT AGTTGCTATT GTATCCGATT TAGGTACCGG AAACCAAAAG      1140
     CTATGGACAG AGCTCGGTAT ATCAGAATGT AAGTTTCGTA TATTACAAAA ATCAGATAAT      1200
     CCTTGAAATT CCATTTTTTA GCAAAAACCT GGTTTAGCCA TCCTGCAGAT GACCATTTAA      1260
     AGATTTTCGT TTTTTCGGAT ACGCCACATT TAATTAAGTT AGTCCGTAAC CACTATGTGG      1320
     ATTCCGGATT AACAATAAAT GGGAAAAAAT TAACAAAAAA AACAATTCAG GAGGCACTTC      1380
     ATCTTTGCAA CAAGTCCGAT CTGTCTATCC TCTTTAAAAT TAATGAAAAT CACATTAATG      1440
     TTCGATCGCT CGCAAAACAG AAGGTTAAAT TGGCTACCCA GCTGTTTTCG AATACCACCG      1500
     CTAGCTCGAT CAGACGCTGC TATTCATTGG GGTATGACAT TGAAAATGCC ACCGAAACTG      1560
     CGGACTTCTT CAAATTGATG AATGATTGGT TCGACATTTT TAATTCTAAA TTGTCCACAT      1620
     CCAATTGCAT TGAGTGCTCG CAACCTTATG GCAAGCAGTT GGATATACAG AATGATATTT      1680
     TGAATCGAAT GTCGGAAATT ATGCGAACAG GAATTCTGGA TAAACCCAAA AGGCTCCCAT      1740
     TTCAAAAAGG TATCATTGTG AATAATGCTT CGCTTGATGG CTTGTATAAA TATTTGCAAG      1800
     AAAACTTCAG TATGCAATAC ATATTAACAA GCCGTCTCAA CCAAGACATT GTGGAGCATT      1860
     TTTTTGGCAG CATGCGATCG AGAGGTGGAC AATTCGACCA TCCCACTCCA CTGCAGTTTA      1920
     AGTATAGGTT AAGAAAATAT ATAATAGGTA TGACAAATTT AAAAGAATGC GTAAACAAAA      1980
     ATGTAATTCC ATGATTTATA ATTGTTTAAT GTTTAGCTAT ATGTTTCAGG AAAGTTTCAG      2040
     TTGAGAATGT AGGTAGTTAT GTGCTGTCTA TTGTGTTTTG TCTTTTATCT GTTTCTTTTC      2100
     ATTTTATTAT TTAATCATTA TCCTTTTGCT TATCCAGCCA GGAATACAGA AATGTTAAGA      2160
     AATTCGGGAA ATATCGAAGA GGACAACTCT GAAAGCTGGC TTAATTTAGA TTTCAGTTCT      2220
     AAAGAAAACG AAAATAAAAG TAAAGATGAT GAGCCTGTCG ATGATGAGCC TGTCGATGAG      2280
     ATGTTAAGCA ATATAGATTT CACCGAAATG GATGAGTTGA CGGAGGATGC GATGGAATAT      2340
     ATCGCGGGCT ATGTCATTAA AAAATTGAGA ATCAGTGACA AAGTAAAAGA AAATTTGACA      2400
     TTTACATACG TCGACGAGGT GTCTCACGGC GGACTTATTA AGCCGTCCGA AAAATTTCAA      2460
     GAGAAGTTAA AAGAGCTAGA ATGTATTTTT TTGCATTATA CAAATAATAA TAATTTTGAA      2520
     ATTACAAATA ATGTAAAGGA AAAATTAATA TTAGCAGCGC GAAACGTCGA TGTTGATAAA      2580
     CAAGTAAAAT CTTTTTATTT TAAAATTAGA ATATATTTTA GAATTAAGTA CTTCAACAAA      2640
     AAAATTGAAA TTAAAAATCA AAAACAAAAG TTAATTGGAA ACTCCAAATT ATTAAAAATA      2700
     AAACTTTAAA AATAATTTCG TCTAATTAAT ATTATGAGTT AATTCAAACC CCACGGACAT      2760
     GCTAAGGGTT AATCAACAAT CATATCGCTG TCTCACTCAG ACTCAATACG ACACTCAGAA      2820
     TACTATTCCT TTCACTCGCA CTTATTGCAA GCATACGTTA AGTGGATGTC TCTTGCCGAC      2880
     GGGACCACCT TATGTTATTT CATCATG                                          2907
//
ID   DMPOGOR11  standard; DNA; INV; 2121 BP.
XX
AC   X59837; S90749;
XX
DR   FLYBASE; FBgn0003122; pogo.
XX
FT   source          X59837:1..2121
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..21
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:2101..2121
FT   SO_feature      intron ; SO:0000188:1438..1541
XX
CC   Derived from X59837 (g8354) (Rel. 45, Last updated, Version 10).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
CC   K. O'Hare, Personal communication to FlyBase, 1 May 2000.
CC   This is probably complete element.
XX
SQ   Sequence 2121 BP;  724 A; 353 C; 399 G; 645 T; 0 other;
     CAGTATAATT CGCTTAGCTG CATCGATAGT TAGCTGCATC GGCAAGATAT CTGCATTATT        60
     TTTCCATTTT TTTGTGTGAA TAGAAAATTT GTACGAAAAT TCATACGTTT GCTGCATCGC       120
     AGATAACAGC CTTTTTAACT TAAGTGCATC ATATCAGCTG TTTTTTTTGC CAATTTCAAT       180
     GAATATCATC AAAGTTAGCT GCGCCATCTA TGAATCATTT TTGCATATCT AAAAGATGCA       240
     AGAATGCCAA CTCGTTTCAG TATCTGCGCA TGTCCGTTTT TGTTTTTGCT TTGATCGTGA       300
     TTTTTGTGTT TTTGTTTCTT ATGGCACAAA GTTATTAAAA TGGGTAAAAC AAAGCGTGTC       360
     GTTGGACTAA CACTAAAGGA AAAGCTTCAA ATAATCGAGT TAGTGACCAA CAAAGTGGAC       420
     AAAAAGGAAA TTTGTGCCAA GTTCAAATGC GACAGATCCA CAGTCAACCG CATTTTACAA       480
     AAAACAAATG AAATTCATGA AGCTGTGGCC GCGTCAGGTT TAAAAAGAAA GCGTCAAAGA       540
     AAAGGAGCGC ACGACTTAGT AGAAGAAGCC TTATACATTT GGTTCGGACA GCAGGAATCA       600
     AAGAACGTAA TTCTTGACCG GCACGTCATA TTAGCAAAAG CGAAAGAATT TTGCCAAAAA       660
     TTTAACGACG CCTTTGAACC TGACGCCAGC TGGCTTTGGC GCTGGCGCAA GCGCCACAAT       720
     ATAAAGTATG GCAAAATACA CGGCGAAACT GCTACAAATG ATTCCGTATC AGCAAATGAG       780
     TACAAAAATG ATATTTTGCC AGGATTGCTT AAAGGTTATA ACCCAGAAGA CATTTTTAAC       840
     GCTGACGAAA CTGCACTCTT TTATAAAGCA ATGCCGAATG CGACATTTTT TACTTGTGGA       900
     AAGCAATTAA ATGGCCAGAA ATCTCAGAGA GTGAGACTTA CTTTGCTGTT TATATGCAAT       960
     GCAACTGGGA CATACAAAAA AACTTTTGTA ATCGGCAGAT CTAAATCGCC ACGATGCTTC      1020
     AAGAATGCTA ATGTGCCCAT TCCGTACTAT GCAAATAAGA AGGCCTGGAT GACTAAGGAT      1080
     CTCTGGCGAA AAATAATGAC AGGATTTGAC GAAGAAATGA AAAAGCAAAA TCGAAAGATT      1140
     TTACTCTTCA TCGACAATGC AACTAGTCAC ACGACTGTCA AGGACTTCGA AAACATAAAA      1200
     TTGTGCTTCA TGCCACCAAA CGCAACGGCT CTACTTCAAC CTCTGGACCA AGGTATTATC      1260
     CACTCATTCA AATTAGAGTA TAGGCGTATT TTGGTCAAAC AGCAGCTCAT TGCTGTTAAT      1320
     TGTGGTAAAT CTACTGTGGA ATTTTTAAAA TCATTATCGT TATTGGATGC TCTATATTTT      1380
     GTCAACCAAG GATGGAAGAA TGTTAAAATG TTAACTATTC AGAATTGTTT TAAAAAGGTA      1440
     AGATGGGATT ATTATTGATA TGTATCTCAA ATAACGAATT TATTATTTTC AGGCTGGATT      1500
     TAAGTTCAGT TTTGAAAATG AAGACACCAT TGCTGAAAAA GACAAACAAT GCGTAGAAGT      1560
     TGACATTGTA TCGAATATTA ATTGGAATGA ATATGCCAAT GTTGATGCAG ATGAGGCTTG      1620
     CCATGGTCAA TTAGATGATG ATGAAATCGT GCGCTCTTTA GTTCAAGATG CAAAAACCAG      1680
     CGATAACGAA GAAAGCCATA GTGATGAAGA TGTGGACGAT ACTGAGCGTC CTACTTTTAA      1740
     GGATGGGTTT GCAGCAATTA AGGCTTTAAA GTCCATTTTT ATGCGAAACA ATAATGATGA      1800
     GTTTTTGCAA AACTTGAATT CTATGGAAGA CAAGCTGTTT AATTTACATA TAAACTCAGC      1860
     TGTATTGCAA AAAAAAATTA CTGACTATTT TTAAGTTAGT TTTAAAAAGT GTTTTAATCA      1920
     ATTCACCATC ACTTAAATTT ATATGTCGAT CTTACTTATC ATTAAGAATG AAATTATCAG      1980
     TTCCTTTTAT GTTTAACATT GTTATAAAGA AATAAATTCT TTATTTTTCC TTAAAAAAAA      2040
     AAATTAAGTT AGCTGCATTT TTAAGTTACC TGCATCGAGG CATTGTGCAA AGTACTCGAG      2100
     GCAGCTAAGC GAATTATACT G                                                2121
//
ID   DMRER1DM   standard; DNA; INV; 5356 BP.
XX
AC   X51968;
XX
DR   FLYBASE; FBgn0003908; R1A1-element.
XX
FT   source          X51968:1..5356
FT   SO_feature      CDS ; SO:0000316:319..1731
FT                   /db_xref="FLYBASE:FBgn0044825; R1A1-element\ORF1"
FT                   /db_xref="SWISS-PROT:P16424"
FT                   /protein_id="CAA36226.1"
FT                   /translation="PVSASIRLLDSSKGGATIGATPMESDSSVSALSGSSASKVSRRGR
FT                   RRSHLASKSSAPTQAKLVALASNGVPEPVGVLEEAFSSLEDARAATSNAANDAAPPAAA
FT                   PAVDHTVAPDVSTAAKIAATTATAATAAARAGQAAMMAELSATQRMVRNSFRSLGGVDT
FT                   EELSCAISRYDELVMALMLRCGELETRLAMPPPPPPPSKANTTAANAPQMPQVAPIAAP
FT                   RTTKVRETWSAVVKCDDPALSGKAIAEKVRTMVAPSLGVRVHEVRELPSRWWCDHSYSS
FT                   VGELQKVMASKRFAELGLNVARNAAEKPKVIVYDVDTAIGPEEFMQELHENNFDSEMTL
FT                   AQFKKSVHLVTKAWSATDGATVNVTLEVDDRAMAKLDVGRVYIKWFSFRCRSQVRTYAC
FT                   HRCVGFDHKVSECRQKESVCRQCGQQGHTAAKCQNPVDCRNCRHRGQPSGHYMLSNACP
FT                   IYGALLARVQARH"
FT   SO_feature      CDS ; SO:0000316:1728..4790
FT                   /db_xref="FLYBASE:FBgn0044824; R1A1-element\ORF2"
FT                   /db_xref="SWISS-PROT:P16425"
FT                   /protein_id="CAA36227.1"
FT                   /translation="TLMFSFIQANCGRGRAATIELGVRLRRSESMFALVQEPYLGGDEM
FT                   DVLPEGMRVFTDRRGKAAILVDHQEAICMPVETLTTDYGVCLVVKGSFGSIFLCAAYCQ
FT                   FDAPLEPYLRYMDAVLLQASRTPAILGLDANAVSPMWLSKLSRHAEGQANYRRGELLSE
FT                   WMLEARVAALNQSTEVYTFDNHRATSDIDVTIVNEAASMWATYEWRVDEWELSDHNIIT
FT                   VVAEPTTARSVESIAPVPSWNFSNARWRLFKEEMVSRIAELPENFSESPLDQQVSTLRS
FT                   IVHSVCDTALGRKLTRSPSRRARWWTADLCAARREVRRLRRLLQDGRRRDDDAAVELVV
FT                   VELRRASAYYKKLIGRAKMDDWKRFVGDHADDPWGRVYKICRGRRKCTEIGCLRVNGEL
FT                   ITDWGDCARVLLRNFFPVAESEAPTAIAEEVPPALEVFEVDTCVARLKSRRSPGLDGIN
FT                   GTICKAVWRAIPEHLASLFSRCIRLGYFPAEWKCPRVVSLLKGPDKDKCEPSSYRGICL
FT                   LPVFGKVLEAIMVNRVREVLPEGCRWQFGFRQGRCVEDAWRHVKSSVGASAAQYVLGTF
FT                   VDFKGAFDNVEWSAALSRLADLGCREMGLWQSFFSGRRAVIRSSSGTVEVPVTRGCPQG
FT                   SISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEKGAQLMSIVETWG
FT                   AEVGDCLSTSKTVIMLLKGALRRAPTVRFAGRNLPYVRSCRYLGITVSEGMKFLTHIAS
FT                   LRQRMTGVVGALARVLRADWGFSPRARRTIYDGLMAPCVLFGAPVWYDTAEQVAAQRRL
FT                   ASCQRLILLGCLSVCRTVSTVALQVLGGAPPLDLAAKLLAIKYKLKRGFPLEENDWLYG
FT                   EDIACLSWEQRKTRLEECLIQSWQNRWDDDSEPGRVTHRFIPYVTLAYRDPSFGFSMRT
FT                   SFLLTGHGSFNAFLHGRALSDTTACACGDPYEDWMHILCACPLYADLRDLDGLGVQRLG
FT                   ENWIFEGILDDQEKTQRLAMFAEEVFLRRRAL"
XX
CC   Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 5356 BP;  1213 A; 1340 C; 1634 G; 1169 T; 0 other;
     CGGACGTGTT TTCGTTGCGC TCGTGGACAT AGTGCGAAGA ACTTTGTTTT CCGTATTTGG        60
     AAGTATACGG AATAAATAAT TTAGTGTTCC GTGGAAGTGG TGCGCAAATT TTCGCGAATT       120
     AAAAACAAGC GGTTTGGAAG TAATTGACAA TAAATTATTG GAAATTTTCC ACTCCGCACG       180
     TGTTGAGCGG CGGAGCTTGC GGGTGAGCTT TTCGAACAGC TGAGAGAAGC TTATTGGTGG       240
     TAGTCACCGC TAAGGATTGT GTCTTGGGAC AGCTTAGTGC ACTCTACCAA TAGGTGGAGC       300
     TATCACCATA GCAACTAGCC CGTGTCAGCG AGCATACGAT TGCTGGACTC GTCAAAAGGA       360
     GGAGCCACCA TCGGAGCAAC GCCGATGGAG AGCGACAGCA GTGTGAGTGC CTTGAGCGGA       420
     AGCAGTGCCT CAAAGGTGTC AAGACGAGGC AGGCGTAGGA GCCATCTGGC CTCCAAGAGC       480
     TCGGCGCCAA CGCAGGCGAA ACTGGTTGCC CTGGCCTCGA ATGGAGTGCC GGAACCCGTT       540
     GGTGTGCTGG AGGAGGCGTT TTCGTCGCTG GAGGATGCCC GGGCGGCTAC GTCAAACGCT       600
     GCCAACGATG CTGCCCCCCC CGCTGCTGCC CCCGCTGTTG ATCACACTGT TGCCCCTGAT       660
     GTTTCCACTG CTGCTAAAAT CGCTGCCACC ACTGCCACCG CTGCCACCGC TGCCGCCCGT       720
     GCTGGGCAAG CAGCCATGAT GGCAGAGCTG TCGGCCACCC AGCGCATGGT GCGAAACAGT       780
     TTCCGCAGCC TAGGAGGCGT AGACACGGAA GAGCTCTCGT GTGCCATCAG CCGCTATGAT       840
     GAGCTGGTGA TGGCATTAAT GCTCCGGTGT GGAGAACTGG AGACGCGGCT CGCTATGCCA       900
     CCACCGCCGC CGCCGCCGTC CAAGGCGAAC ACTACTGCCG CCAATGCTCC CCAGATGCCT       960
     CAGGTTGCAC CCATCGCTGC CCCGCGGACA ACCAAGGTTC GTGAGACGTG GTCAGCGGTG      1020
     GTGAAGTGCG ACGACCCTGC GCTATCGGGG AAAGCCATAG CCGAAAAGGT GCGGACGATG      1080
     GTTGCACCCT CCCTCGGAGT CAGAGTACAC GAGGTACGTG AGCTGCCGTC GAGGTGGTGG      1140
     TGCGATCATT CGTACTCTTC GGTTGGAGAG CTGCAGAAGG TGATGGCATC GAAAAGATTC      1200
     GCAGAACTTG GACTGAATGT GGCACGGAAC GCGGCCGAGA AGCCGAAGGT CATAGTCTAT      1260
     GACGTCGACA CAGCCATCGG CCCAGAAGAG TTCATGCAGG AGCTTCACGA GAACAACTTC      1320
     GACAGTGAAA TGACTCTGGC CCAGTTCAAA AAGTCGGTGC ACCTGGTGAC CAAGGCGTGG      1380
     TCGGCTACTG ACGGTGCCAC CGTAAACGTG ACGCTAGAGG TAGACGACCG GGCGATGGCG      1440
     AAACTTGATG TAGGACGTGT CTACATTAAG TGGTTTTCGT TCCGATGCCG ATCGCAAGTC      1500
     CGCACCTATG CCTGCCACAG ATGTGTGGGT TTCGACCACA AGGTTAGTGA ATGCAGGCAG      1560
     AAGGAGAGTG TTTGCCGCCA GTGCGGGCAA CAAGGCCACA CCGCGGCAAA GTGCCAAAAC      1620
     CCGGTGGACT GCCGGAACTG CCGTCACAGA GGGCAACCTT CGGGGCATTA TATGCTCTCG      1680
     AATGCTTGCC CGATATACGG AGCGTTGTTA GCGAGGGTGC AAGCTAGACA CTAATGTTTA      1740
     GCTTCATCCA AGCGAACTGT GGCCGAGGCA GAGCTGCGAC CATCGAGCTC GGAGTCCGAC      1800
     TCAGGAGATC GGAGTCAATG TTTGCTCTGG TGCAGGAGCC GTATCTTGGC GGGGATGAAA      1860
     TGGATGTGCT GCCTGAAGGA ATGAGGGTTT TCACCGACCG GCGAGGGAAG GCAGCCATCC      1920
     TAGTGGATCA TCAGGAAGCC ATCTGCATGC CAGTGGAAAC TCTCACCACA GATTATGGCG      1980
     TATGTCTGGT CGTTAAAGGG AGTTTTGGCT CAATCTTCCT TTGCGCCGCA TACTGCCAGT      2040
     TCGATGCACC TCTGGAACCG TACCTCCGGT ACATGGATGC GGTCCTGCTG CAGGCCAGCA      2100
     GAACCCCCGC AATCCTGGGC CTCGACGCGA ATGCAGTGTC CCCCATGTGG CTTAGCAAAC      2160
     TCTCTCGTCA TGCCGAGGGG CAAGCTAACT ACAGACGGGG TGAGCTGCTG TCTGAGTGGA      2220
     TGCTGGAGGC AAGAGTCGCC GCCCTAAACC AGTCAACAGA GGTGTACACG TTCGATAATC      2280
     ACAGAGCGAC TAGTGATATC GACGTGACAA TCGTCAATGA AGCAGCATCT ATGTGGGCCA      2340
     CATATGAGTG GAGAGTGGAC GAGTGGGAAT TGAGTGACCA CAACATCATT ACTGTTGTGG      2400
     CCGAACCAAC TACCGCGCGC TCAGTTGAGA GCATAGCTCC TGTGCCGTCC TGGAACTTCT      2460
     CCAATGCACG TTGGCGATTG TTCAAGGAGG AAATGGTGAG TAGAATAGCC GAACTTCCGG      2520
     AAAACTTTTC AGAGTCGCCG TTGGACCAGC AAGTTTCGAC CCTGCGCAGT ATAGTACATA      2580
     GTGTATGTGA TACTGCGCTA GGAAGGAAGT TGACTCGATC GCCCAGCAGG AGAGCACGTT      2640
     GGTGGACTGC CGACCTCTGC GCTGCAAGGC GCGAAGTCCG AAGACTTCGT CGCCTGCTCC      2700
     AAGATGGAAG GCGTCGAGAT GACGATGCCG CTGTAGAGCT TGTAGTGGTC GAGCTGAGGC      2760
     GTGCCTCAGC CTACTACAAG AAGCTCATTG GAAGGGCGAA GATGGATGAC TGGAAACGCT      2820
     TCGTGGGAGA TCATGCCGAC GACCCATGGG GGCGCGTCTA CAAGATTTGC CGAGGTCGCA      2880
     GGAAGTGCAC GGAGATTGGG TGCCTCCGCG TGAATGGCGA GCTGATCACT GATTGGGGTG      2940
     ACTGCGCACG AGTGCTCCTC CGCAATTTTT TCCCAGTTGC GGAGTCCGAA GCACCGACTG      3000
     CCATCGCGGA GGAAGTCCCA CCGGCCCTCG AAGTATTCGA GGTTGATACA TGTGTTGCCC      3060
     GGCTGAAGAG CAGGCGCTCT CCCGGGTTGG ACGGCATCAA TGGCACTATC TGCAAGGCAG      3120
     TCTGGCGCGC CATACCCGAG CACCTAGCAT CATTGTTTTC CCGATGCATC CGATTGGGAT      3180
     ACTTTCCAGC CGAGTGGAAG TGCCCACGAG TTGTCTCGTT GCTCAAAGGG CCAGATAAGG      3240
     ACAAGTGTGA GCCCTCCTCA TACAGAGGAA TATGCTTGCT ACCAGTCTTT GGAAAGGTGC      3300
     TCGAGGCCAT CATGGTGAAT CGTGTGAGAG AAGTTCTTCC GGAAGGCTGC AGATGGCAAT      3360
     TCGGATTTCG CCAAGGACGA TGTGTGGAGG ATGCTTGGAG GCACGTGAAG AGCAGTGTTG      3420
     GCGCCAGCGC GGCGCAATAC GTGCTCGGCA CATTCGTGGA CTTCAAAGGA GCATTCGACA      3480
     ACGTCGAATG GAGTGCTGCA CTCAGCCGAC TAGCCGACTT GGGATGCCGG GAAATGGGCT      3540
     TGTGGCAGAG CTTTTTCTCC GGCCGAAGAG CAGTGATCCG AAGCAGTTCC GGTACTGTGG      3600
     AGGTACCGGT AACTAGAGGC TGCCCGCAGG GATCAATCAG CGGCCCATTT ATCTGGGACA      3660
     TACTGATGGA TGTACTGCTT CAGCGTCTCC AGCCGTATTG CCAGCTGAGT GCATACGCGG      3720
     ATGACTTGCT GCTTCTCGTC GAGGGAAATT CCCGAGCTGT GCTAGAGGAA AAAGGAGCGC      3780
     AACTAATGTC CATCGTAGAA ACGTGGGGAG CGGAAGTTGG CGATTGCCTC TCGACCAGCA      3840
     AGACGGTAAT CATGCTGCTG AAAGGTGCCT TGAGACGTGC GCCTACGGTG AGGTTTGCTG      3900
     GACGGAACCT TCCGTATGTG CGTAGCTGTC GGTACCTTGG CATCACGGTC AGTGAAGGAA      3960
     TGAAATTCCT CACGCACATA GCTTCGCTTC GCCAGCGGAT GACAGGAGTC GTTGGAGCAT      4020
     TGGCGCGTGT GCTTCGAGCC GACTGGGGCT TCAGTCCTCG AGCCAGGCGG ACCATATATG      4080
     ACGGACTCAT GGCACCTTGT GTGCTGTTTG GTGCCCCGGT ATGGTATGAC ACCGCGGAAC      4140
     AAGTAGCTGC CCAGAGGCGA CTAGCCTCCT GCCAGAGGCT AATCCTGCTT GGATGCCTTT      4200
     CGGTATGCCG AACAGTATCC ACAGTGGCAC TGCAGGTACT TGGTGGAGCT CCCCCGCTTG      4260
     ATCTGGCTGC TAAGTTATTA GCGATCAAAT ACAAGCTAAA ACGTGGATTC CCGCTGGAGG      4320
     AGAACGACTG GCTTTACGGC GAGGACATTG CGTGTCTTAG CTGGGAGCAG AGGAAGACTC      4380
     GCCTAGAGGA GTGTTTAATC CAGAGTTGGC AGAACAGATG GGACGATGAC AGCGAACCAG      4440
     GACGGGTGAC GCATAGGTTT ATCCCATACG TCACTCTTGC CTATCGGGAT CCAAGTTTTG      4500
     GATTCTCGAT GAGGACGTCT TTCCTGCTTA CAGGGCACGG GTCGTTCAAT GCATTTTTGC      4560
     ACGGGAGAGC CCTCAGCGAT ACCACTGCTT GCGCATGTGG AGATCCATAT GAGGACTGGA      4620
     TGCATATCTT GTGCGCTTGC CCCCTATATG CAGATCTGCG GGACCTAGAT GGACTTGGAG      4680
     TGCAGCGCCT TGGCGAAAAC TGGATCTTCG AGGGAATCCT GGATGATCAA GAGAAGACTC      4740
     AACGGCTGGC AATGTTTGCG GAAGAAGTGT TCCTGAGGAG GAGGGCCCTT TAGCTCAACA      4800
     TCTCTGCCGT GTGGTTAGCG GGCGAGAATA CTACCACAGT CCGCTGTTGC TTGTCGTAAG      4860
     AGACGACTAA TACAGCGATA GGATTCCTCT AACCCTGCTT GTCGGAGCAA AAGGGGGAGG      4920
     CCCACCGAGC CTCTTTTCGG TACCACGGGT TGAGCAGCTA TCCAAGACTG CTCATTGAGG      4980
     TAGGCCCCCT GGTGGGAGTA TCGTGGTGGC TGTGGTTGGT ACCCATATCG CGGGTAGAGC      5040
     CTTCATGCTC GACGTTTGAG TTACGGTGCT AGTTGCGCAA AACTCGGGTG CTGTGACCCA      5100
     GAGATCAGTA GAGATTTTAG GTAGATCTCG CTCCTCAGCA AGGGGGAGTG CTTGCCCGGC      5160
     AAGCAAGTAC TCGAATTGCT ACCGGGGTGG TCGCTATGTA CATAGCTATA GCTTCTAGTC      5220
     CGGGACGCTT GTCTGGCGTA TCCAGACACA TGCACCATAT GCTCACTTGT GGGCGTATAG      5280
     GGTGCCGTGG TTGTAATCCC TTCAGTGTGG AACACGCCAC GTAAAATAAG TTCGGAGGGA      5340
     TCCGAAAAGC ATACAT                                                      5356
//
ID   DMRER2DM   standard; DNA; INV; 3607 BP.
XX
AC   X51967;
XX
DR   FLYBASE; FBgn0003909; R2-element.
XX
FT   source          X51967:1..3607
FT   SO_feature      CDS ; SO:0000316:181..3351
FT                   /db_xref="FLYBASE:FBgn0016699; R2-element\ORF"
FT                   /db_xref="SWISS-PROT:P16423"
FT                   /protein_id="CAA36225.1"
FT                   /translation="FERKNFSDGLVPQRKFIHIGTTSTNNEPRIPLHNLMTTRPSVDIF
FT                   PEDQYEPNAAATLSRVPCTVCGRSFNSKRGLGVHMRSRHPDELDEERRRVDIKARWSDE
FT                   EKWMMARKEVELTANGCKHINKQLAVYFANRSVEAIKKLRQRGDYKEKIEQIRGQSALA
FT                   PEVANLTIRRRPSRSEQDHQVTTSETTPITPFEQSNREILRTLRGYSPVECHSKWRAQE
FT                   LQTIIDRAHLEGKETTLQCLSLYLLGIFPAQGVRHTLTRPPRRPRNRRESRRQQYAVVQ
FT                   RNWDKHKGRCIKSLLNGTDESVMPSQEIMVPYWREVMTQPSPSSCSGEVIQMDHSLERV
FT                   WSAITEQDLRASRVSLSSSPGPDGITPKSAREVPSGIMLRIMNLILWCGNLPHSIRLAR
FT                   TVFIPKTVTAKRPQDFRPISVPSVLVRQLNAILATRLNSSINWDPRQRGFLPTDGCADN
FT                   ATIVDLVLRHSHKHFRSCYIANLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYE
FT                   GGGTSLNGDGWSSEEFVPARGVKQGDPLSPILFNLVMDRLLRTLPSEIGAKVGNAITNA
FT                   AAFADDLVLFAETRMGLQVLLDKTLDFLSIVGLKLNADKCFTVGIKGQPKQKCTVLEAQ
FT                   SFYVGSSEIPSLKRTDEWKYLGINFTATGRVRCNPAEDIGPKLQRLTKAPLKPQQRLFA
FT                   LRTVLIPQLYHKLALGSVAIGVLRKTDKLIRYYVRRWLNLPLDVPIAFVHAPPKSGGLG
FT                   IPSLRWVAPMLRLRRLSNIKWPHLTQNEVASSFLEAEKQRARDRLLAEQNELLSRPAIE
FT                   KYWANKLYLSVDGSGLREGGHYGPQHGWVSQPTRLLTGKEYMDGIRLRINALPTKSRTT
FT                   RGRHELERQCRAGCDAPETTNHIMQKCYRSHGRRVARHNCVVNRIKRGLEERGCVVIVE
FT                   PSLQCESGLNKPDLVALRQNHIDVIDTQIVTDGHSMDDAHQRKINRYDRPDIRTELRRR
FT                   FEAAGDIEFHSATLNWRGIWSGQSVKRLIAKGLLSKYDSHIISVQVMRGSLGCFKQFMY
FT                   LSGFSRDWT"
XX
CC   Derived from X51967 (g8432) (Rel. 24, Last updated, Version 1).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 3607 BP;  1064 A; 818 C; 900 G; 825 T; 0 other;
     TTGGGGATCA TGGGGTATTT GAGAGCAGAG GGGGAGTATT CTTCTGTAAT TCGTAAGTCA        60
     TATCATATGA TGTGCGGAAG GGGAATTTTA CTCTGTAACT CACAAGTCTC TCCTTTACTC       120
     AAGTCGACTC AAAACCTCCT CGTGGTGGTC CCGGTAATGC TAAACTCGTT TAGCAGCTAA       180
     TTTGAGCGGA AAAACTTTTC CGATGGGCTG GTTCCCCAGA GGAAATTTAT TCATATTGGA       240
     ACTACAAGCA CAAATAACGA GCCTCGGATA CCTTTACACA ATCTGATGAC GACCCGACCC       300
     TCCGTGGATA TCTTCCCGGA GGACCAATAT GAACCAAACG CAGCGGCTAC TCTATCTAGG       360
     GTTCCCTGCA CAGTATGTGG CCGGTCCTTT AACAGCAAGA GAGGACTCGG TGTTCACATG       420
     CGATCTCGGC ACCCAGACGA ACTTGATGAA GAACGTCGAC GTGTCGATAT AAAGGCAAGA       480
     TGGAGTGATG AAGAGAAGTG GATGATGGCG AGAAAGGAGG TTGAGCTCAC AGCAAATGGA       540
     TGTAAACACA TAAACAAGCA ACTAGCGGTG TATTTTGCAA ACCGCAGCGT CGAAGCCATC       600
     AAAAAGCTAA GACAGAGGGG CGATTATAAG GAGAAAATAG AGCAGATAAG AGGGCAATCA       660
     GCTCTCGCCC CGGAAGTTGC TAATCTAACC ATAAGGCGCC GCCCTAGTAG AAGTGAGCAA       720
     GACCACCAAG TAACAACATC GGAAACAACT CCAATCACTC CCTTCGAACA GTCGAACAGG       780
     GAAATTTTGC GGACACTACG CGGGTATAGC CCCGTAGAAT GCCATTCCAA ATGGAGAGCC       840
     CAAGAGTTGC AAACTATCAT TGATAGGGCA CATCTCGAGG GAAAGGAAAC CACTCTCCAA       900
     TGCTTATCGC TATATCTCCT GGGAATTTTT CCGGCACAGG GTGTACGACA CACACTGACG       960
     AGACCTCCTC GGAGACCTCG GAACAGGAGA GAAAGCAGAA GGCAGCAGTA CGCTGTCGTC      1020
     CAGCGTAACT GGGATAAGCA TAAAGGAAGA TGCATCAAGT CCTTGCTAAA TGGAACTGAT      1080
     GAGTCGGTAA TGCCAAGCCA AGAAATAATG GTTCCCTACT GGAGAGAAGT AATGACTCAG      1140
     CCTAGCCCAA GCTCTTGCAG TGGAGAAGTG ATACAAATGG ATCACTCGCT TGAGAGGGTA      1200
     TGGTCTGCTA TTACAGAGCA GGACCTTCGG GCGTCAAGAG TCTCATTATC CTCGTCTCCG      1260
     GGGCCTGACG GGATAACTCC AAAATCTGCC AGGGAGGTGC CGTCAGGTAT TATGCTGCGC      1320
     ATAATGAACC TAATTCTATG GTGCGGTAAT CTACCACACT CCATACGACT GGCCAGAACC      1380
     GTCTTCATCC CGAAGACGGT GACGGCGAAG CGACCGCAAG ACTTTCGTCC AATATCAGTG      1440
     CCTTCAGTCC TGGTAAGACA GCTAAATGCA ATATTGGCAA CCCGGTTGAA CTCATCAATC      1500
     AATTGGGACC CGCGCCAGCG GGGCTTCTTA CCAACCGACG GATGCGCCGA TAATGCGACG      1560
     ATAGTCGACT TAGTCTTGAG GCATAGCCAT AAGCACTTTA GATCTTGCTA CATCGCAAAT      1620
     TTAGATGTAA GCAAGGCATT TGATTCTCTA TCACATGCAT CTATATACGA CACCTTACGT      1680
     GCTTATGGTG CGCCAAAGGG CTTCGTTGAC TACGTACAGA ACACGTACGA GGGCGGTGGT      1740
     ACCAGTCTCA ATGGGGACGG TTGGAGTTCA GAGGAATTCG TCCCTGCTAG AGGAGTGAAG      1800
     CAGGGTGACC CTTTGTCTCC TATTCTATTT AACTTGGTAA TGGACAGGTT ACTTAGAACC      1860
     TTACCCAGCG AAATTGGTGC CAAAGTCGGA AATGCCATTA CTAACGCGGC CGCGTTTGCA      1920
     GATGATTTGG TACTATTTGC GGAAACTCGG ATGGGGCTTC AAGTATTGTT GGACAAGACG      1980
     TTGGATTTTC TATCTATCGT CGGCCTCAAA CTTAATGCCG ACAAATGTTT TACCGTTGGC      2040
     ATTAAGGGCC AGCCGAAACA GAAGTGTACC GTGTTAGAGG CACAGAGCTT CTACGTAGGC      2100
     TCGAGTGAGA TTCCATCACT GAAGCGCACG GACGAGTGGA AGTACTTAGG CATCAACTTC      2160
     ACTGCAACCG GGAGGGTTCG ATGCAATCCG GCCGAGGACA TTGGTCCAAA GCTACAAAGA      2220
     TTGACAAAGG CCCCCCTCAA ACCACAACAG AGGTTGTTCG CCCTTCGGAC TGTCCTTATC      2280
     CCACAGCTCT ACCACAAGTT AGCCCTTGGG AGTGTGGCGA TAGGCGTCCT AAGAAAAACT      2340
     GATAAACTTA TAAGATATTA TGTGCGAAGA TGGCTAAATC TTCCGCTGGA TGTGCCGATA      2400
     GCATTTGTTC ATGCACCCCC AAAAAGTGGA GGTCTCGGAA TTCCATCACT AAGATGGGTA      2460
     GCTCCAATGT TAAGGCTAAG ACGCTTGAGT AACATTAAAT GGCCTCACCT CACGCAAAAC      2520
     GAGGTAGCCA GCTCTTTCCT CGAAGCCGAA AAACAACGGG CCCGAGATAG ATTATTAGCT      2580
     GAACAAAATG AACTGTTATC GCGTCCGGCA ATAGAAAAAT ATTGGGCGAA CAAGTTGTAC      2640
     CTCTCAGTTG ATGGTAGCGG ACTCCGTGAA GGCGGCCATT ATGGCCCGCA ACACGGGTGG      2700
     GTTAGTCAAC CCACGCGTTT ATTAACAGGA AAGGAATATA TGGACGGTAT TCGTCTGCGG      2760
     ATAAATGCCC TACCCACAAA GTCTCGTACT ACAAGGGGAA GGCACGAATT GGAACGACAG      2820
     TGTCGTGCAG GATGTGATGC TCCCGAAACA ACAAACCACA TAATGCAAAA ATGCTACCGC      2880
     TCGCATGGGA GGCGGGTAGC TAGACACAAC TGCGTAGTAA ATCGAATCAA GCGGGGACTT      2940
     GAGGAGAGAG GCTGCGTGGT CATTGTTGAA CCAAGTCTGC AGTGCGAATC CGGCCTTAAT      3000
     AAACCAGACC TGGTGGCACT ACGACAAAAT CACATTGATG TGATCGACAC ACAAATTGTG      3060
     ACAGACGGAC ACTCTATGGA TGATGCGCAC CAGCGCAAAA TCAATAGATA CGACAGACCG      3120
     GACATACGAA CTGAATTGCG TCGCAGATTC GAAGCCGCAG GTGACATTGA ATTCCATTCT      3180
     GCCACCCTGA ACTGGAGGGG GATCTGGAGT GGTCAATCCG TTAAAAGATT GATAGCAAAG      3240
     GGTCTCCTCA GCAAATATGA TAGTCATATC ATTAGCGTCC AGGTTATGAG AGGCAGTCTC      3300
     GGTTGTTTTA AACAGTTCAT GTACCTGAGC GGGTTTTCCC GAGATTGGAC TTAGCTAAAT      3360
     CGTTTGGTTC AAAACATTTG CTTGCTGTCT TGGCATAACA TCAATAAAGG CATAAACATC      3420
     GCAAAATAAT GGTTATAATT AAATGGCTAT GAGGATGGTT TTAGTACGTA GGCGTTGCGG      3480
     AACTTCGGTT CATATAGAGC AATGAATCGT GCATGCTAGG AAAACTGACC ACACACAGTG      3540
     TTGGCAGACC TAGTATCTTT CGAAGATTTC CATACCTCCG CGATCAAAAA AAAAAAAAAA      3600
     AAAAAAA                                                                3607
//
ID   DM33463    standard; DNA; INV; 1736 BP.
XX
AC   U33463;
XX
DR   FLYBASE; FBgn0004905; S-element.
XX
FT   source          U33463:37..1772
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..234
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1503..1736
FT   SO_feature      CDS ; SO:0000316:404..1441
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044019; S-element\T"
FT                   /db_xref="REMTREMBL:AAC47095"
FT                   /protein_id="AAC47095.1"
FT                   /translation="MPGKRLAFEVTQLIYYNHQLGKSIPELVEIFSVSRKTVYNILNRX
FT                   XKEGRLEPKSGGGCKTKINKRVDRLIMRKAIANPRISVRSLAQDIREECHLTVSHETVR
FT                   QVILRHRYSSRVARKKPLLSEINIEKRHSFAVSMMDHAEEYWDDVIFCDETKMMLFYND
FT                   GPSRVWRKPLSALETQNIIPTIKFGKLSVMIWGCISSHGVGKLAFIESTMNAVQYLDIL
FT                   KTNLKASAEKFGLFSNNKPNFKFYQDNDPKHKEYNVRNWLLYNCGKVIDTPPQSPDLNP
FT                   IENLWAYLKKKVAKRGPKTRQQLMAAIIEEWEKIPLEYDLKKLIHSMKKRLQLVAKANG
FT                   GHTKY"
XX
CC   Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 1736 BP;  600 A; 287 C; 300 G; 545 T; 4 other;
     CAGTTTGTCA AGAAACTGTT TACACACCGC AAAATAAGTA GAATTTTTGA CTTTAAAGGC        60
     CAAAATTAAG GGTTTTTTGC TTAATTAAAC GCAATTTTTT TATGAAATAT AATTAAACAA       120
     TATTTATTTT ACTTATAAAT TAAAAAACAA ATTCAATATA TCAAATATAC AAGAAAATAA       180
     ACAACAAATT TCTTGTTTAC ACACTTTTGA GAGTGCCAAG AAACTCTTTA CACAGTTTTG       240
     GGTTCCTACT TTGTTTTGCT CTTTTTCTTA GAAACAATCT CATTTTTCCG TTATTTTTGT       300
     CTTATGCATT CCTTTTTACA ACGCTTCTAT TGCAATTTTT TCACTTTGCT TGTGAAATTT       360
     TGTTGATCTA ACGTGCTTAA AGCGAATTAT TAAATTTAAT GAAATGCCTG GAAAGAGATT       420
     GGCTTTTGAA GTGACCCAGC TAATATACTA TAACCACCAG TTGGGAAAAT CTATTCCTGA       480
     ATTAGTAGAA ATATTTTCCG TATCCCGTAA AACCGTCTAT AATATTTTAA ATCGTNNNNA       540
     AAAAGAGGGC AGGCTTGAAC CTAAGAGTGG TGGTGGGTGT AAAACGAAAA TTAACAAGCG       600
     AGTAGACCGC CTTATTATGC GAAAAGCGAT TGCGAACCCC CGAATCTCGG TCAGATCACT       660
     TGCTCAGGAT ATCAGGGAAG AATGTCACCT AACTGTATCA CACGAAACTG TGCGCCAAGT       720
     CATCCTACGC CATAGGTACT CTTCAAGAGT TGCAAGAAAA AAGCCTTTGC TATCAGAGAT       780
     CAATATTGAA AAGCGTCATT CATTCGCTGT GAGCATGATG GATCATGCGG AAGAGTACTG       840
     GGATGACGTC ATATTTTGTG ACGAAACAAA AATGATGCTC TTTTATAACG ATGGGCCAAG       900
     CAGAGTATGG CGCAAACCGT TGAGTGCGCT AGAAACACAA AATATAATTC CAACAATCAA       960
     ATTTGGAAAA TTGTCAGTGA TGATTTGGGG CTGTATTTCC AGCCATGGAG TGGGCAAACT      1020
     AGCCTTTATT GAAAGCACTA TGAATGCCGT GCAATATCTA GATATTTTAA AAACAAATTT      1080
     GAAGGCCAGT GCAGAAAAAT TTGGTTTGTT TAGCAACAAC AAGCCAAATT TTAAGTTTTA      1140
     TCAGGACAAT GATCCCAAAC ATAAAGAGTA CAATGTACGC AACTGGCTAC TCTATAACTG      1200
     TGGCAAGGTG ATCGATACGC CCCCTCAGAG TCCTGATCTA AACCCCATTG AAAATTTGTG      1260
     GGCCTACTTA AAGAAGAAGG TTGCAAAAAG GGGCCCCAAA ACTCGACAAC AACTCATGGC      1320
     TGCGATAATC GAAGAGTGGG AAAAGATCCC GCTTGAATAT GACCTAAAAA AACTCATACA      1380
     TTCCATGAAA AAAAGGCTTC AACTTGTAGC CAAAGCCAAT GGGGGTCATA CTAAATACTA      1440
     AAACTTTTCA AATATTATCA AAATAATTAA AAAATTTAGG ATTAAACTTA GGTTTAGTGT      1500
     TTTGTGTAAA GAGTTTCTTG ACACTCTCAA AAGTGTGTAA ACTTGAAATT TGTTGTTTAT      1560
     TTTCTTGTAT ATTTGATATA TTGAATTTGT TTTTTAATTT ATAAGTAAAA TAAATATTGT      1620
     TTAATTATAT TTCATAAAAA AATTGCGTTT AATTAAGCGA AAAACCCTTA ATTTTGACCT      1680
     TTAAAGTCAA AAATTCTACT TATTTTACGG TGTGTAAACA GTTTCTTGAC AAACTG          1736
//
ID   SPRINGER    standard; DNA; INV; 7546 BP.
XX
AC   AF364549;
XX
DR   FLYBASE; FBgn0003490; springer.
XX
FT   source          AF364549:1..7546
FT   SO_feature      five_prime_LTR ; SO:0000425:1..403
FT   SO_feature      three_prime_LTR ; SO:0000426:7143..7546
FT   SO_feature      CDS ; SO:0000316:1058..2422
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044343; springer\gag"
FT                   /db_xref="SPTREMBL:Q967T6"
FT                   /protein_id="AAK52057.1"
FT                   /translation="MSESFRQYRNSKKCASDSESESDDSTENSVRKNTPTNAFTAYKMS
FT                   LETEQIKALIRALQEQALESQRREADLRKTIQDLAGQVAAIQIAPARAEAPPIKVYRPV
FT                   EITGLVPCGETLDAVKCLPDFMGTQETYVSWRQAANAAYHMFRKYEDSSRHYQAVVIIR
FT                   SKVKGPADAVLSSFGTILNFDAIISRLDFTYSDKRPIHVIEQELGTLRQGSLTLLQYYD
FT                   EVEKKLTLLTNKATMSYEASAATVLCEKFRDDALRVFVSGLRRNLTDVLFAAKPKDMPS
FT                   ALALAQEVESNHERYTFATSFARSQEDRDHKQYPKVQERQRAPPQAGSQGSAGKNPHFT
FT                   KQHRAQVHSAPRSDRMARENMPEPMDVDPSLSRMQPSHAPAYPKSKPAASGRSVPPKRQ
FT                   RVNHVAQASDDLDKVYNTAASSAAVKVDDDSILEYDSDTINFLGESPCYPSSDEE"
FT   SO_feature      CDS ; SO:0000316:2434..5475
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044342; springer\pol"
FT                   /db_xref="SPTREMBL:Q967T5"
FT                   /protein_id="AAK52055.1"
FT                   /translation="MKLLIDTGAAKNFIRPFKGLKGVRPVQSPFTIHSIHGVTTITKKC
FT                   FVSIFNLKATFFLLPDLTSFDAIVGLDLLKQAGASLCLASGKLKWGSGAEQIDFHTCPD
FT                   VNFTKVDCSDAPPLIKDAFLKMLGNRKKAFADPNEALPYNTSVVATIRTVDEEPIYAKL
FT                   YPYPMGAADFVNGEIQELLKNGIIQKSKSPYNNPIWVVDKKGTDDAGNKKMRLVLDFRK
FT                   LNERTVPDRYPMPNISMILGNLGKAKYFTTLDLKSGYHQITLAERDREKTAFAVNGGKY
FT                   EFRRLPFGLRNAASIFQRTIDDILREQIGKFCYVYVDDVIIFSEDENDHVKHVDWVLKS
FT                   LYDANMRISAEKSRFFKKSVSFLGFIVTNNGAATDPEKVKAIKEFPEPKNVFEVRSFLG
FT                   LASYYRCFIKDFASIARPISDILKGENGSVSRHRSRSIQVEFSEAQQRAFEKLRNILAS
FT                   EDVILRYPDYKKAFDLTTDASAYGIGAVLSQEGRPITMISRTLSDREVNYATNERELLA
FT                   IVWALAKLRHYLYAVKEINIFTDHQPLTFAVSESNPNAKIKRWKARIDESGARIFYKPG
FT                   RNNLVADALSRQQLNVVEEQEPESCAATIHSELSLTHTIESTDKPVNCFQNQIILEEAR
FT                   SHWKRTFILFGNKRRHSINFSCKQALLEELANIIIPNGVNAFHCDLHTLALIQDDVVRQ
FT                   FPATKFWHCKNRVTDIFAMQERKEILTVEHNRAHRSAQENVKQVLSEYYFPKMTKLASE
FT                   IAANCKTCAKAKYDRHPKKQELGETPVPTHVGEILHIDIFSTDKKYFLTCVDKFSKFAM
FT                   VQPILSRTIEDLKAPLLQLMNVFPKAKTIYCDNEPSLKSQTIVAMLENHFGVSISNAPP
FT                   LHSVSNGQVERFHSTLIELARCLKIDKGISDTVELVLLATARYNMSIHSVINKKPAEVM
FT                   RADPDDPHTDVQEKIKNAQILTRKRENASRQNRVFQVGDKVLVKSNRRLGNKLTPLCEE
FT                   KTIEADLGTTVLIKGRVVHKDNLK"
FT   SO_feature      CDS ; SO:0000316:5870..7147
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044344; springer\env"
FT                   /db_xref="SPTREMBL:Q967T4"
FT                   /protein_id="AAK52056.1"
FT                   /translation="MLDMFPQSHMKKLLSVDIAHLRDMLDSLSIHHRVARSLDFLGTAL
FT                   KVVAGTPDAEDFEKVKFTEARLVDAHNSQIEINTKTQVRINELTDTINKLLKISKSAQI
FT                   DTGHLYETLSTRNRIIVMELQNLMLTITLAKINVVSPNFLDHADLESIWGEEPTNTPIR
FT                   EILSVASVKVLQSLNILHFIIKFPKIIMACNKVTILPVVHHDTVLRLKDNVVAECNREI
FT                   RTVKNCSITPGATFCQLSSVSSCAQELHAGVVAHCDAQQSDLHPITYVDEGIIVINDRP
FT                   ALVRVDNGTAIHIRGTHLITFIESAMVNETVFFNHDMVQNRAPGVANSPVLNISMKHEV
FT                   LSLPYLHRLSEKNLEQIRNFEKDVDGYRLSQIALVAGAIFCALICIGLTWQRTTRAKKS
FT                   TAQLKEVLAQIGSAEGGLNLEEGIVN"
XX
CC   Derived from BACR06P08 by Sue Celniker, 29 March 2001.
CC   Michael Ashburner, 9-Apr-2001.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7546 BP; 2131 A; 1909 C; 1712 G; 1794 T; 0 other;
     AGTTAACTAA GTTAACCGGA CTGATCGTCC GCACACCAGC ACCGGTCAAA CTGCTGACCA        60
     AGCATTTGGC CGGAAGCTCA TGCATAGCCG GCAGAAGCTC TGCGCATTGG CAGAGGCCGC       120
     TATGATGTTT TTCCCTTTGT TAGCTTATAG TCAGTTTGAT TTTGTATTCA ATAAAGAGCG       180
     CATCGCGCCT TCAATCAACT CCAGCTACTG CTGTTATCAT TGAATTGGTT GGCTAGCCTT       240
     AAGGGCAGTC AACAACGGAG AGACGTTCTC CCACCATATC TCCCAATCTA GGAGAAGAGG       300
     TCTGCGGCAA CCGCCCTGCC TCCCAGTGAC AGAAGAACCC CCCGTTACCT GCAACCTACG       360
     CCGGAGACCG CGGCGAGGGA CCTGCACCTT ATATTTAATT AATTGGCACC CAACTCCAGG       420
     AACCCACACC ACTACCCTGA ATCATGTAAG TGGGATTCTC AACTTAAACA CTACTCCAAA       480
     CTGCGTCTAG AATTTTAAAA TATTTGGGAT GTTTGTGCGA GTTACATAAA TAAATTAAGA       540
     AAATCGGCAT TTCCACTACA ATAAACGTTT ATATGTGTTG CGAATTAAGA TTATGTTACT       600
     GTTATGAAGT TTAAATATCG AATTTTGATT TGTGGTTGAC TTTGCAATCC ATATTGTGTG       660
     CATTTCATTC CGCCTTCGCA CATCCGCGGG ACACTGTCGT TTCATTCGAA ATTTAATTCG       720
     CTACATTGGC TTCACAGCCC TTTCAAGCTT TGTTGTTTTT GACCCACTCC ACTTCGCTAC       780
     CCGATACTGG CGCATGCATT GCTGTGACAA TTTTGTGCCT TTTATTTATC TCTTTGTCTT       840
     TGCTGTGGCA ATTTTTGTCT TTGGATATTT GTTTGCCTTA TTGGAGACCC GCTCCCCGCA       900
     GGCCCTTCAC CTTATCGTTA CTTAGCTGGA CAGTGGCTCT GCTCGTTGAG TCTTCGTCCA       960
     ATGCCTTCAA AGCGGCGACT CAGCCCCCGC GACCCCCTTG CCGTACTGTT TGGCCCCACG      1020
     GGCACAACGG CCTGAGTATT CACATACATA GCTACCCATG AGCGAGTCAT TCCGACAATA      1080
     TAGGAATTCT AAAAAGTGCG CTAGCGACTC AGAGTCCGAA AGCGACGATT CGACAGAAAA      1140
     CTCTGTACGT AAAAACACCC CAACTAACGC ATTCACTGCA TATAAAATGT CCCTCGAAAC      1200
     GGAACAAATT AAAGCTCTCA TAAGGGCATT ACAAGAGCAA GCCTTAGAGA GTCAACGCAG      1260
     GGAGGCTGAC TTGCGTAAAA CAATTCAAGA TCTGGCCGGC CAGGTCGCGG CCATACAGAT      1320
     TGCCCCTGCC CGGGCAGAAG CTCCCCCAAT CAAAGTTTAC AGACCAGTAG AAATCACCGG      1380
     ACTGGTCCCT TGTGGGGAAA CATTGGATGC CGTTAAATGT CTTCCAGACT TTATGGGGAC      1440
     ACAGGAGACA TACGTCTCCT GGCGGCAAGC GGCAAATGCC GCTTACCATA TGTTCAGGAA      1500
     ATATGAGGAT AGTTCGCGGC ACTATCAAGC TGTGGTCATC ATCAGGAGCA AAGTTAAAGG      1560
     CCCTGCTGAT GCAGTTCTGT CGTCCTTTGG GACTATACTG AATTTCGATG CGATCATAAG      1620
     TCGCCTCGAT TTCACGTATA GTGACAAACG CCCGATACAC GTTATCGAGC AGGAGCTAGG      1680
     CACCCTCAGA CAGGGAAGCC TGACGCTCCT CCAGTATTAT GATGAGGTCG AGAAAAAACT      1740
     CACCTTACTC ACCAATAAGG CGACTATGTC TTATGAAGCG TCGGCAGCAA CGGTGCTGTG      1800
     TGAGAAGTTC CGAGATGATG CTTTGAGAGT TTTTGTCTCG GGGCTCAGGC GCAACCTCAC      1860
     AGACGTGCTA TTCGCGGCAA AGCCTAAGGA CATGCCGTCA GCGCTCGCCC TGGCGCAAGA      1920
     AGTAGAGTCC AATCATGAGC GGTACACTTT TGCAACTTCA TTTGCACGAA GCCAAGAGGA      1980
     TAGGGACCAC AAGCAATATC CCAAAGTGCA GGAGCGCCAA CGGGCCCCCC CACAAGCCGG      2040
     CTCGCAGGGA AGTGCTGGGA AGAACCCGCA CTTTACTAAG CAGCATAGAG CACAGGTGCA      2100
     CTCCGCTCCA CGTAGCGACC GAATGGCCCG AGAAAACATG CCAGAACCCA TGGACGTTGA      2160
     CCCGTCGTTG TCCAGGATGC AGCCATCTCA CGCCCCGGCT TACCCGAAAT CGAAGCCGGC      2220
     CGCGTCTGGC CGTTCGGTCC CACCAAAAAG GCAAAGGGTC AACCATGTTG CCCAGGCCTC      2280
     TGATGATTTG GACAAGGTTT ATAACACCGC AGCCTCCAGT GCAGCAGTTA AAGTCGACGA      2340
     CGATTCCATC CTAGAGTACG ACTCGGATAC CATTAATTTT TTAGGGGAAA GTCCCTGCTA      2400
     CCCGTCATCA GACGAAGAGT AGCGGGGATC GACATGAAAC TACTGATTGA TACGGGCGCG      2460
     GCAAAAAATT TTATCCGACC ATTTAAGGGG TTGAAAGGCG TCCGCCCGGT GCAGTCCCCA      2520
     TTTACAATCC ATTCGATTCA TGGTGTGACT ACAATAACTA AGAAATGTTT CGTGTCCATT      2580
     TTTAATCTTA AAGCTACCTT TTTTTTATTA CCAGACTTGA CCTCCTTTGA CGCGATCGTT      2640
     GGCCTAGACC TGTTAAAACA GGCCGGCGCG TCACTTTGCC TAGCTTCCGG CAAGCTCAAA      2700
     TGGGGCTCCG GAGCAGAGCA AATTGACTTT CATACTTGCC CCGATGTCAA TTTCACCAAA      2760
     GTAGATTGCT CGGACGCACC GCCCTTAATT AAGGATGCTT TTTTAAAAAT GCTCGGGAAT      2820
     AGGAAAAAAG CTTTTGCTGA TCCTAATGAG GCTCTTCCTT ACAATACGTC GGTGGTAGCC      2880
     ACCATCCGGA CGGTTGATGA GGAGCCCATT TATGCCAAGT TATACCCATA TCCCATGGGA      2940
     GCAGCTGACT TCGTCAACGG CGAAATTCAG GAACTGCTTA AAAATGGCAT AATCCAAAAG      3000
     TCAAAGTCCC CCTACAATAA CCCAATATGG GTCGTAGACA AAAAGGGCAC TGACGATGCG      3060
     GGCAATAAAA AAATGCGCTT GGTGCTGGAC TTTCGAAAAC TTAACGAAAG GACGGTACCA      3120
     GACAGATACC CCATGCCAAA TATCTCTATG ATATTGGGGA ATCTCGGCAA GGCCAAATAC      3180
     TTCACGACCC TCGATCTGAA GTCTGGCTAC CACCAAATCA CGCTCGCAGA ACGCGACCGT      3240
     GAAAAGACAG CGTTCGCAGT AAACGGAGGG AAGTATGAGT TCCGAAGGCT GCCATTCGGA      3300
     CTCAGGAATG CTGCAAGCAT CTTCCAAAGA ACAATTGACG ATATTCTGCG AGAGCAGATC      3360
     GGAAAGTTCT GCTACGTTTA CGTCGATGAC GTCATCATCT TTTCGGAAGA TGAAAACGAC      3420
     CATGTCAAGC ATGTAGATTG GGTTCTGAAG AGCCTGTACG ACGCTAACAT GAGAATATCG      3480
     GCAGAAAAGT CACGTTTTTT TAAGAAAAGC GTGAGCTTCC TGGGGTTCAT CGTCACCAAC      3540
     AATGGGGCGG CGACTGACCC AGAAAAGGTT AAGGCCATAA AGGAATTTCC GGAACCCAAA      3600
     AACGTATTTG AGGTAAGGTC ATTCTTGGGC TTAGCCAGCT ATTATCGTTG CTTTATCAAA      3660
     GACTTCGCAT CAATAGCTAG GCCCATTTCA GACATATTGA AGGGCGAGAA CGGTAGTGTT      3720
     AGCCGACACA GGTCCAGGAG TATCCAGGTA GAATTTTCCG AAGCGCAACA ACGTGCCTTC      3780
     GAAAAGCTAC GCAATATCCT GGCGTCTGAG GACGTCATCC TGAGATACCC TGATTACAAA      3840
     AAAGCGTTTG ATCTAACGAC AGACGCTTCG GCCTACGGCA TTGGCGCAGT GCTGTCCCAG      3900
     GAGGGACGTC CCATTACAAT GATCTCAAGG ACATTGTCTG ACAGAGAGGT TAACTATGCT      3960
     ACCAACGAAA GGGAGCTGTT AGCCATAGTC TGGGCACTGG CTAAGTTGCG GCACTACCTG      4020
     TATGCGGTTA AAGAGATAAA CATCTTTACC GATCACCAAC CTCTGACGTT CGCGGTATCG      4080
     GAGTCCAATC CGAACGCCAA AATTAAGAGA TGGAAAGCAC GCATCGACGA GTCCGGCGCA      4140
     CGAATTTTTT ACAAGCCTGG GAGAAACAAC CTCGTTGCAG ATGCCCTCTC GAGACAACAA      4200
     CTCAACGTTG TTGAAGAGCA AGAACCGGAG TCGTGCGCGG CCACGATTCA CAGCGAACTT      4260
     TCGCTTACGC ACACGATCGA GTCCACGGAC AAACCCGTGA ATTGCTTCCA GAACCAGATA      4320
     ATTTTGGAAG AGGCGCGCTC CCATTGGAAA CGCACTTTTA TATTATTTGG GAATAAGAGG      4380
     CGGCACTCGA TCAATTTCTC GTGCAAACAA GCTTTGCTGG AGGAACTCGC CAACATCATT      4440
     ATCCCTAATG GTGTAAACGC CTTCCACTGT GATCTTCACA CGCTGGCGCT AATCCAGGAC      4500
     GACGTAGTTC GACAGTTTCC AGCCACGAAA TTCTGGCATT GTAAGAATAG GGTCACCGAC      4560
     ATCTTCGCGA TGCAGGAGAG AAAAGAAATC CTCACCGTCG AGCACAACAG AGCTCACAGG      4620
     TCGGCCCAAG AAAACGTGAA ACAAGTACTC TCCGAGTACT ACTTCCCGAA AATGACCAAA      4680
     TTGGCGAGCG AAATAGCAGC CAATTGCAAA ACTTGCGCAA AGGCGAAGTA TGACAGACAT      4740
     CCGAAGAAGC AGGAGCTCGG TGAGACACCA GTCCCGACCC ACGTAGGAGA AATATTGCAC      4800
     ATCGATATTT TCTCAACGGA TAAAAAATAC TTTCTCACCT GTGTTGACAA GTTTTCTAAA      4860
     TTCGCCATGG TACAGCCGAT TCTGTCTAGA ACCATAGAAG ATTTGAAAGC ACCCCTTTTA      4920
     CAACTTATGA ATGTTTTCCC CAAAGCCAAA ACCATCTACT GCGACAATGA ACCATCATTG      4980
     AAATCGCAGA CAATAGTGGC TATGCTGGAA AACCATTTTG GCGTCAGCAT TTCGAATGCA      5040
     CCGCCCCTAC ATAGCGTCTC AAACGGACAG GTGGAACGAT TCCACAGCAC GTTAATTGAG      5100
     CTCGCCAGAT GCCTAAAAAT CGACAAAGGC ATAAGTGACA CAGTGGAATT GGTCTTGCTG      5160
     GCCACAGCCA GATATAACAT GTCCATCCAC TCCGTCATCA ATAAAAAACC GGCCGAAGTC      5220
     ATGCGGGCAG ATCCGGACGA TCCACATACC GATGTCCAAG AAAAAATCAA AAACGCCCAG      5280
     ATTTTGACAA GAAAACGAGA GAACGCTTCT CGGCAGAACA GAGTGTTCCA GGTCGGCGAC      5340
     AAAGTCCTAG TAAAGTCAAA CAGACGATTA GGCAACAAAC TTACTCCTTT ATGTGAGGAG      5400
     AAGACCATCG AGGCAGACTT GGGGACCACA GTCCTTATTA AAGGGAGGGT GGTCCATAAA      5460
     GACAACCTCA AGTGACCCAA GCAGAGCCTA GCCGCGGCTC CCTCGGAGGC ACACTTTTAT      5520
     TCCTCCAATT TGTAGCCACT CGGCATAAGT TTTTTCATTG TTTTTATAGC CGCTTGGCAT      5580
     AAGTTTTTTA TTTTTTAGCC ACTTGGCATA TTTTTTATAT ATTTTCGCTA TTATTGGTGG      5640
     TGGGCAACTC CATTCCGAAC AAGTAATAAT TTATCACACA CGTTACAGGT CGCTCCCAAC      5700
     CCTTCTTCTT TGTTTCCTGG CCACGACATC GGCCCACATT ACTGACTATT CCCGAGCGAA      5760
     TTACATTCCC GTCATTGACG GTAAAGTCTT AGTCTGGGAG GAATTCGCCT ATGTCAGACA      5820
     CTCGGCTAAC CTCTCCGAGT ATAGGCGGGT AATTGACGAA ACCGACAGCA TGCTCGATAT      5880
     GTTCCCCCAG TCCCATATGA AGAAGCTCCT GAGCGTTGAT ATCGCTCACC TCCGTGACAT      5940
     GCTTGATTCT TTGAGCATCC ATCACAGAGT GGCAAGGAGC CTAGACTTCT TGGGAACTGC      6000
     GTTAAAGGTT GTCGCAGGGA CACCTGACGC GGAAGACTTC GAGAAAGTCA AGTTCACTGA      6060
     AGCGCGGCTT GTTGATGCAC ACAATAGCCA AATCGAAATA AACACCAAAA CACAAGTTCG      6120
     AATTAACGAA CTCACTGATA CCATAAATAA ACTTTTAAAA ATTTCCAAAA GCGCTCAGAT      6180
     TGATACAGGT CACCTGTATG AAACGCTTTC TACTCGCAAC AGAATCATTG TAATGGAATT      6240
     GCAAAACTTA ATGCTCACTA TAACCCTCGC TAAAATTAAC GTAGTGAGTC CAAACTTCTT      6300
     GGACCACGCA GATCTGGAGA GTATTTGGGG CGAGGAGCCC ACCAACACCC CCATAAGGGA      6360
     GATTTTGTCC GTTGCGTCTG TAAAAGTCCT ACAATCCCTT AACATCTTAC ACTTTATTAT      6420
     TAAATTCCCC AAGATTATCA TGGCGTGCAA CAAAGTCACT ATCCTTCCAG TGGTACACCA      6480
     CGATACGGTG TTAAGGTTGA AAGATAATGT GGTAGCAGAG TGCAACAGAG AAATACGCAC      6540
     AGTAAAGAAT TGCTCCATAA CACCAGGGGC AACATTTTGC CAGTTATCTT CAGTGAGCTC      6600
     GTGTGCGCAG GAGCTCCACG CTGGGGTCGT AGCACATTGC GACGCACAGC AGAGTGATCT      6660
     ACATCCGATC ACCTACGTCG ACGAAGGAAT AATCGTCATC AATGACAGAC CAGCACTCGT      6720
     GCGTGTGGAC AATGGAACGG CCATCCACAT TAGAGGCACG CACCTCATAA CATTCATTGA      6780
     GAGTGCCATG GTCAACGAGA CCGTCTTCTT TAATCATGAC ATGGTCCAGA ATAGGGCGCC      6840
     GGGAGTGGCT AATTCCCCAG TCCTTAATAT CTCGATGAAA CACGAGGTCC TGAGCCTCCC      6900
     ATACCTTCAC CGTTTAAGTG AAAAGAACTT GGAGCAAATC AGGAACTTCG AGAAGGACGT      6960
     CGACGGATAC CGACTAAGTC AGATAGCGTT AGTTGCGGGA GCAATTTTCT GCGCTCTTAT      7020
     CTGCATCGGT TTAACCTGGC AGCGAACCAC TAGGGCCAAG AAATCTACAG CCCAACTGAA      7080
     GGAAGTTCTC GCCCAAATAG GGTCAGCCGA GGGCGGCCTT AATCTTGAGG AGGGAATAGT      7140
     TAACTAAGTT AACCGGACTG ATCGTCCGCA CACCAGCACC GGTCAAACTG CTGACCAAGC      7200
     ATTTGGCCGG AAGCTCATGC ATAGCCGGCA GAAGCTCTGC GCATTGGCAG AGGCCGCTAT      7260
     GATGTTTTTC CCTTTGTTAG CTTATAGTCA GTTTGATTTT GTATTCAATA AAGAGCGCAT      7320
     CGCGCCTTCA ATCAACTCCA GCTACTGCTG TTATCATTGA ATTGGTTGGC TAGCCTTAAG      7380
     GGCAGTCAAC AACGGAGAGA CGTTCTCCCA CCATATCTCC CAATCTAGGA GAAGAGGTCT      7440
     GCGGCAACCG CCCTGCCTCC CAGTGACAGA AGAACCCCCC GTTACCTGCA ACCTACGCCG      7500
     GAGACCGCGG CGAGGGACCT GCACCTTATA TTTAATTAAT TTAACT                     7546
//
ID   TARTC    standard; DNA; INV; 11124 BP.
XX
AC   AY600955;
XX
DR   FLYBASE; FBgn0004904; TART-C.
XX	
FT   source          AY600955:1..11124
FT   SO_feature      non_LTR_retrotransposon ; SO:0000189
CC                   telomeric retrotransposon
FT   SO_feature      direct_repeat ; SO:0000314:1..331
FT   SO_feature      direct_repeat ; SO:0000314:10383..10713
FT   SO_feature      five_prime_UTR ; SO:0000204:1..205
FT   SO_feature      three_prime_UTR ; SO:0000205:6629..11102
FT   SO_feature      non_LTR_retrotransposon_polymeric_tract ; 
FT                   SO:0000433:11103..11124
CC                   derived from polyA tail of RNA transposition intermediate  
FT   SO_feature      CDS ; SO:0000316:206..3349
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /product="gag protein"
FT                   /protein_id="AAT12844.1"
FT                   /db_xref="GI:47231635"
FT                   /translation="MDGHNGDINEGWATVLSISSDDSNQLSSPPSIIVSSLDTTPTSN
FT                   ETTIVRRSLHNPKADMKSYRFENIVLNENKNTILPDPLFVDKCGNTANTTEANEKKPA
FT                   NSPFPISIIKNLSTSSPLTHVDTPTQEDDASAFNTLKAAKTARIIFPTHTQIKPAKPS
FT                   PPSKELSTNSAPKTLSYTDKITVTQKNLPDKTHVDRPTQDDDINATKASKTAKIISTQ
FT                   LHLRETKPTQPAKDPSPRTQKPIANKAAETLTHTDKLIASQNLVPAKTHINSPTQYND
FT                   TNATNALKTAKINFSSHSHQSEIKPTQSAKNISPLTQKQFTSESAGTHTHTDKHKNTA
FT                   SQNLFSAKTHINSPTQHNDTSAATASKTAKLILSPHSHLSETKPTQPALSPSPLSQKQ
FT                   ITSIAAKTLTHTNKHTASQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQ
FT                   TKPIKPAINALHAAQDTNPSPAISAVTYTDKPTATQNIFPVKTFAELIRENAKRSPTP
FT                   IENPPQAKHDSAALGRPPTAARKNLNKTLISPKTPGKRRGDCLDEGLLQTSNKKVRIR
FT                   DDFSDDDLGVTNLLSETPLFKSKAAIKIRQDSRRESLQKSAEMDTAPAISPSNAAADP
FT                   DLPPWKTVPASRKPPSIFLSNIQQIIPLIEKLNYKAGVNSFTTKSELGNNIRIQAKTM
FT                   DAYNAIQNVLLEANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQDIGIATKFI
FT                   RAMQFRDTRNPMRIHEVEVVPKADGSHLKVLLIKSLGGQTVKVERKRVSKDPTQCHRC
FT                   QCFGHTKNYCRNPFKCMKCGQLHASVSCTKPKNLPATCANCNGSHVSSYKGCPVFQEA
FT                   KQRLSINKIQSLHSQPTHLQTPRNKHPYPKPTHIQTPLNKQPYTHPLPRTLVNNTKLP
FT                   AKRIQGKKISQRNLSINKRLNRIRTLDRKPRNETSPPTTSKKVLASLEESRKNPNSAL
FT                   NPANTHLTHFRPPPLAQNIPNDESKELSGEQYLLNRIEGMEKKLNNLLEIVTRLLSQG
FT                   KDCPKSPKNPFRDPIFV"
FT   SO_feature      CDS ; SO:0000316:3350..6628
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /product="pol protein"
FT                   /protein_id="AAT12845.1"
FT                   /db_xref="GI:47231636"
FT                   /translation="MLFLVTSEVTFPMTRECNRDILKIAFWNAGGINNKIDELKLFIL
FT                   NIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPASSKRGGVATIVNSSLRHMALEPI
FT                   EKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTMGGQTKL
FT                   ILCGDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIVATGSATHFPHDTRKSPSAID
FT                   FSICKRLGRYEKRISSSAHLSSDHLPILLEINLDIKTISLQKQNNNILKKTTNIELFK
FT                   NVLERKILLNTEIRVAEDINDAINIFIKNIKDSAAESTPSPRIPDNHRRRYGQANRNS
FT                   HTLTLDENTSRLLEEKRIQSRIFKATRTNEDKTKLKAAENRLKKVIKILREKRINEQI
FT                   EGIDTNNPDRMRKIWRLLSEGKKMNQPNFPLKLETKKGPKWTKTIKETTEAFVSHLEG
FT                   RFKPNKIVPDYHIDKVNTGLRIIKESMLTERHNLNKNPHNQPITLNELNEEIKNLKNS
FT                   KAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSSNE
FT                   PKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQF
FT                   ILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKILPYNLYIILESYLTNRTFEVK
FT                   DQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTI
FT                   VLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIFTLKNDLPTNSMNVKI
FT                   KGQTIKKESKQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKI
FT                   LILKSVLSPIWQYAIAAWGPLVTDAQIRRVQVEENRKIRDICRAGRYTRNQTIRDLFG
FT                   VKTVEEFYQQAMHRFSETIKSHPNIAVRRILSRHYIPNRLERSRQRYFKMTNDHITQK
FT                   QTGLALSPKLLKIPDIDDCRTVKKRSEREKIRQMHLTELPTLLRLEEEEEELKRIKKQ
FT                   EEREKRERENQKWPPDRWCELEINRYNKQYRKGDLTRQEVIEKFRGQPLNVQRIILPD
FT                   YEGD"
XX
CC   A PNTR (Perfect Non-Terminal Repeat) is a perfect direct repeat partially 
CC   overlapping the UTRs (annotated as "direct_repeat ; SO:0000314").   
CC   Distinguishing characteristics of PNTR’s are that the 3’ repeat terminates
CC   upstream of the 3’ end of the element and that the 5’ PNTR extends a short
CC   distance into ORF-1. The 5’ ends of TART-C elements are variable and the 
CC   minimal size for functionality has not been determined.  Thus, this 
CC   canonical sequence, AY600955, may be 5’ truncated within the 5’ PNTR (M-L 
CC   Pardue, 2009).
XX
CC   Derived from AY600955, Michael Ashburner, 6-Apr-2004; updated Jan-2009 as 
CC   per Mary-Lou Pardue and Greg DeBaryshe.
CC   Any changes to original sequence record are annotated in an FT line. 
XX
//
ID   AY561850    standard; DNA; INV; 13424 BP.
XX
AC   AY561850;
XX
DR   FLYBASE; FBgn0004904; TART-A.
XX
FT   source          AY561850:1..13424
FT   SO_feature      non_LTR_retrotransposon ; SO:0000189
CC                   telomeric retrotransposon
FT   SO_feature      direct_repeat ; SO:0000314:1..1850
FT   SO_feature      direct_repeat ; SO:0000314:11179..13028
FT   SO_feature      five_prime_UTR ; SO:0000204:1..1759
FT   SO_feature      three_prime_UTR ; SO:0000205:7953..13411
FT   SO_feature      non_LTR_retrotransposon_polymeric_tract ; 
FT                   SO:0000433:13412..13424
CC                   derived from polyA tail of RNA transposition intermediate  
FT   SO_feature      CDS ; SO:0000316:1760..4672
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:;" 
FT                   /db_xref=”GI:45594384”
FT                   /protein_id="AAS68533.1"
FT                   /translation="MDGQNVNQSGGWASVLSISSDDGNCSSSPPSAIVSSLDTTPTSN
FT                   ETTIVRRSLYQTNADMKSYDFENIVLNENKNTILPDPLFVDKCGSTANTTEANEKQPA
FT                   DSPFPISISKNFSTSSPLTHVDTPTQEDDASAFNTLKAAKTARIIFPTHTQIEPAKPS
FT                   PPSKELSSNSAPKTLSYTDKITATQKNFPTKTHVDTPTQDDDTNATKASKTAQIDSSH
FT                   SQLHETKPTQPAKNPSPLTQKLTTNKTAKTHTHTDKPTASQNLFPTKTHINSPTQYND
FT                   TNASTASKDGKINLSSHSHLRETKPTQPAKNPSPLSQKQITSIAANTLTHTNKHTASQ
FT                   NFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTKPIKPAINALHPAQDTNP
FT                   SPAISAVTYTDKPTATQNIFPAKTFAELVRENAKRSQTAMQNPPHAKHDSAALGRLPS
FT                   AARKNLTKTLSSPKTPGKRRGDCLDEGLLQTSNKKVRIRDDFSDDDLGVTNLLSETPI
FT                   FKSKVAIKIRQDSRRESLQKSVEMDTAPAISPSNTAAEPDLPPWKTVPASRKPPSIFL
FT                   SNIQQIIPLIEKLNYKAGVNSFTTKSELGNNIRIQAKTMDAYKAIQNVLLGANIPLHS
FT                   HQPKSAKGFQIVIRHLHQSTPTKWIESQLQDIGIATKFIRAMQFRDTRNPMRIHEVEV
FT                   VPKADGSHLKVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPFKCMKC
FT                   GQLHATVSCTKPKNLPATCANCNGSHVSSYKGCPAFQEAKQRLSINKIQSLHSQPTHL
FT                   QTPRNKHPYPKPTHFQTPRNKQSYTHPPPRTTVNNTKLPAKRIQGKKLSQRNISINKR
FT                   LNRIRAFDKKPRKETSPPTTSKKVLASLEESSKNPNSVLNPANTHLTHFCPPPITQDI
FT                   PNDEPTEPSQEQYLLNRIEGMEKKLNNLLEIVTRLLNQGRECPKSPKNPFRDPILI"
FT   SO_feature      CDS ; SO:0000316:4710..7952
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:;" 
FT                   /db_xref=”GI:45594385”
FT                   /protein_id="AAS68534.1"
FT                   /translation="MTRACNRDILKIAFWNAGGINNKIDELKLFILNIDAHIVIVTET
FT                   RLDNKSTKLELPGYFTYLAQNPVSSKRGGVATIVNSSIRHMALEPIEKECIQSAPIVL
FT                   LPENNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQ
FT                   WGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEK
FT                   RISSSADLSSDHLPILLEINLDTSTLFLQKQNNNILKKTTNIELFKTVLERKILLNTE
FT                   IRVAEDINDAINIFIKNIKDSADESTPSPRIPDNLRRMHGQANRNSHTLTLDENTSRL
FT                   LEEKRILSRIFKATRTDEDKAKLKAAENRLKKAVKILREKRINKQIEGIDTKNPDRMR
FT                   KMWRLLDEGKKTNQPNFPLKLETKRGPKWTKTIKETTEAFVSHLEGRFKPNNNVPDYH
FT                   INTVNSGLRTIKESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQL
FT                   IKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSG
FT                   LSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCS
FT                   AVFLDISEAFDRVWHEGLLLKLAKILPYNLYIILESYLTNRTFEVKDQAGETSRAGQI
FT                   GAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAAT
FT                   RNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQS
FT                   YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQ
FT                   YAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAV
FT                   HRFSETTKSHPNVAVRRIFSRHYIPNRLERSRQRYLKMTMDHITQKQTGLTLSPKLLK
FT                   IPDLDDCRTLKKRSEREKIRQTHLTELPTLLRLEEEEAELKRIKKQEERERRERENQK
FT                   WPPDRWCELEINRYNKKYRNGDLTRQEIIEKFRGQPLNVQRIILPDYEGD"
XX
CC   A PNTR (Perfect Non-Terminal Repeat) is a perfect direct repeat partially 
CC   overlapping the UTRs (annotated as "direct_repeat ; SO:0000314").   
CC   Distinguishing characteristics of PNTR’s are that the 3’ repeat terminates
CC   upstream of the 3’ end of the element and that the 5’ PNTR extends a short
CC   distance into ORF-1. The 5’ ends of TART-A elements are variable and the 
CC   minimal size for functionality has not been determined.  Thus, this 
CC   canonical sequence, AY561850, may be 5’ truncated within the 5’ PNTR (M-L 
CC   Pardue, 2009).
XX
CC   Derived from AY561850, Michael Ashburner, 6-Apr-2004; updated Jan-2009 as 
CC   per Mary-Lou Pardue and Greg DeBaryshe.
CC   Any changes to original sequence record are annotated in an FT line. 
XX
//
ID   DM14101    standard; DNA; INV; 10654 BP.
XX
AC   U14101;
XX
DR   FLYBASE; FBgn0004904; TART-B.
XX
FT   source          U14101:1..10654
FT   SO_feature      non_LTR_retrotransposon ; SO:0000189
CC                   telomeric retrotransposon
FT   SO_feature      direct_repeat ; SO:0000314:1..1046
FT   SO_feature      direct_repeat ; SO:0000314:9031..10076
FT   SO_feature      five_prime_UTR ; SO:0000204:1..961
FT   SO_feature      three_prime_UTR ; SO:0000205: 7386..10637
FT   SO_feature      polyA_signal_sequence ; SO:0000551:10479..10484
FT   SO_feature      polyA_signal_sequence ; SO:0000551:10600..10605
FT   SO_feature      non_LTR_retrotransposon_polymeric_tract ; 
FT                   SO:0000433:10638..10654
CC                   derived from polyA tail of RNA transposition intermediate 
FT   SO_feature      CDS ; SO:0000316:962..4093
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /product="gag protein"
FT                   /db_xref="FLYBASE:FBgn0014071; TART-element\ORF1"
FT                   /db_xref="SPTREMBL:Q23999"
FT                   /db_xref=”GI:603663”
FT                   /protein_id="AAC46493.1"
FT                   /translation="MDGHNGDQSEGWATVLSISSDDSNSLSSPPSIIVSSLDTTPTSHE
FT                   TTIVRRSLYQTNADMKSYDFENIVLNENKNTILPDPLFVDKCGSTANTTEANEKKPANS
FT                   PFPISISKNFSTSSPLTHVDTPTQEDDASAFNTLKAAKTARIIFPTHTHIKPTKPSPPS
FT                   KELSTNSALKTLSYTDKITGTQKNLPDKTHVDTPTQDDDINATKASKTAKIISTQTHLG
FT                   ETKPIQPAKDPSPRTQKPIAHKADETLTHTDKLTASQNLVPAKTHINTPTQYNDTNATN
FT                   ALKTAKINFSSHSHQSEIKPTQSAKNISPLTQKQFTSESAGTHTHTDKHKNTASQNLFS
FT                   AKTHINSPTQHNYTSAATASKTAKLILSPHSHLSETKPTQPALSPSPLSQKQITSIAAK
FT                   TLTHTNKHTASQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTKPIKSAI
FT                   NALHPAQDTNPSPAISAVTYTDKPTATQNIFPVKTFAELVRENAKRLPTPMQNSHQAKN
FT                   DSAALGRPPTAARKNLNKTLISPKTPGKRRGDCLDEGLLQTSNKKVRIRDDFSDDDLGV
FT                   TNLLSETPLFKSKAAIKIRQDSRRDSLQKSAEMDTAPAISPSNTAADSDLPPWKTVPAS
FT                   RKPPSIFLSNIQQIIPLIEKLNYKAGVNSFTTKSELGNNIRIQAKTMDAHNAIQNVLLE
FT                   ANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQDIGIATKFIRAMQFRDTRNPMR
FT                   IHEVEVVPKADGSHLKVLLLKSLGGQTVKVERKRVSKDPTQCHRCQCFGHTKNYCRNPF
FT                   KCMKCGQLHATVSCTKPKNLPATCANCNGSHVSSYKGCPAFQEAKQRLSINKIQSLHSQ
FT                   PTHLQTPRNKHPYPKPTHLQTPRNKQPYTHPLPRTSVNNTKLPAKRIQGKKISQRNLSI
FT                   NKRLHRMKKPRKETSPPTTSKKVLASLEESRKNPNSVLNPANTHLTHFRPPPLAQNIPN
FT                   DEPKELSGEQYLLNRIEGMEKKINNLLEIVTRLLRQGKDCPKSPKNPFRDPIFV"
FT   SO_feature      CDS ; SO:0000316:4131..7385
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /product="pol protein"
FT                   /db_xref="FLYBASE:FBgn0014072; TART-element\ORF2
FT                   /db_xref="REMTREMBL:AAC46494"
FT                   /db_xref=”GI:603664”
FT                   /protein_id="AAC46494.1"
FT                   /translation="MTRADNRDILKIAFWNAGGINNKIDELKLFILNIDAHIIIVTETR
FT                   LDNNSTKLELPGYFTYLAQNPVSSKRGGVATIVNSSIRHMALKPIEKECIQSAPIVLLP
FT                   ENNRRSEMIVIASVYCPPSLRWLPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGC
FT                   TRACQRGTALYEAVQADSTAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRFEKRISS
FT                   GADLSSDHLPILLEINLDTNTLFLQKQNNNILKKNTNIELFKKVLERKILLNTEIRVAE
FT                   DINDAISTFMKNIKDSAAESTPSPRIRDNPRRRHRQANRNSHTLALDENTSRLLEEKRI
FT                   LSRVFKATKNYEDKAKLKAAENRLKKAIKILRENRINEQVEGIDTSNPDRMRKMWKLLD
FT                   EGKRTNQPNFPLKLETQKGPKWTKTIKETTETFVSHLEGRFKPNNNVPDYHIDRVNTGL
FT                   RIIKESMLTERHNLNKNPHNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKAT
FT                   LYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLL
FT                   KRLFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEAFERKEYCSAVFLDISEAFD
FT                   RVWHEGLLLKLAKILPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGP
FT                   LLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDW
FT                   ADKWGISVNAAKTGHVIFTLKNDLPTSLRTMKIKGQVIKIESKQSYLGVILDSKLTLSS
FT                   HVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYAIAAWGPLVTDAQI
FT                   RRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALHRFSETIKSHPNIAVR
FT                   RIFTRHYIPNRLERSRQRYLKMTNEHITQKQTGQTLSPKLLKIPDLNDCRTLKKRNERD
FT                   KIRQTHLIELPTLLRLEEEEEELRRIKKQEERERREKETQKWPPDRWCELEINLYNKQY
FT                   RRGDLTRQEIIQKFRGQPLNVQRIILPDYKGDQEHN"
XX
CC   A PNTR (Perfect Non-Terminal Repeat) is a perfect direct repeat partially 
CC   overlapping the UTRs (annotated as "direct_repeat ; SO:0000314").   
CC   Distinguishing characteristics of PNTR’s are that the 3’ repeat terminates
CC   upstream of the 3’ end of the element and that the 5’ PNTR extends a short
CC   distance into ORF-1. The 5’ ends of TART-B elements are variable and the 
CC   minimal size for functionality has not been determined.  Thus, this 
CC   canonical sequence, U14101, may be 5’ truncated within the 5’ PNTR (M-L 
CC   Pardue, 2009).
XX
CC   Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997; updated Jan-2009 as per 
CC   Mary-Lou Pardue and Greg DeBaryshe.  
CC   Any changes to original sequence record are annotated in an FT line.
XX
//
ID   TIRANT   standard; DNA; INV; 8526 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0004082; Tirant.
XX
SY   synonym: prygun
XX
FT   source          X93507:1..2484
FT   SO_feature      five_prime_LTR ; SO:0000425:1..417
FT   SO_feature      three_prime_LTR ; SO:0000426:8109..8526
FT   SO_feature      CDS ; SO:0000316:1866..2999
FT   SO_feature      CDS ; SO:0000316:3239..6505
FT   SO_feature      CDS ; SO:0000316:6683..8146
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
CC   This replaces that from X93507 in versions previous to 4.8.
XX
SQ   Sequence 8526 BP; 2961 A; 2097 C; 1384 G; 2084 T; 0 other;
     GGAGTTACCA CCCCACCCCC TAAACCCCCA CGCCTCTAAA CAAATCATCG GACACTCAAC        60
     CGGGAAGACG GCAACTGGAA CACCGCATCC GGCCGAATGC TGACATTCCG GCCGAATGCT       120
     GACATTACAC AAAAGTCGCA CTGCAACATT GTCCCCAGCT AGCCAGCCAC ATGCCGAGTC       180
     GGCATGTTCA TTATGCTTAC AATTAAGAAC CTATGTACTT ATGTATAAGA CGAAAACGGA       240
     GGACTCGAGT AGCCACTCTC TGACAATAAA CTTGATACTG ATTTTGAACT TCAAGAAAGT       300
     CAGTCGTATT CTTTATTGGA AATCTTCACA CTACAACTAT CTGCTGAAAC TTAAAAACCT       360
     TCATACATTT ACACATCATA TCTTCACAAA AGGCTCCACC CTCGATCACG GACTTAACTG       420
     GCGCAGCCGG TAGGATGTCC TACCTATTAA TAATTACCTA CCTGTAAGTA AACATGTAAG       480
     AAACGAAACA AACTATATGC AAGATGTCGA CTGAAAGTGA CTAGGAACAA ATTTTTATAA       540
     AACAAAATTG AAGTTGTGAA GTACCAAATG AAACTCAAAC ATATATTCAA ACACAGGAAA       600
     AAAAAAGAGA GAGGAAAAAT GTAAAATAAA TAAATATACA AAAAAAAGTG CAAGTGTACC       660
     GTACTGCCGC GCTGACGTGG AATCTATCGC TGATCATCAC GCCATCGGTA TGTCCATACT       720
     CTGCCGAACG TCATAATTTT TTTAAAAAAG TGCAAGTGTA CCGTACTGCC GCACTGACGT       780
     GGAATCTATC GCTGATCATC ACGCCATCGG TATGTCCATA CTCTGCCGAA CGTCATAATT       840
     TTTATAAAAA AGTGCAAGTG TACCGTACTG CCGCGCTGAC GTGGAATCTA TCGCTGATCA       900
     TCACGCCATC GGTATGTCCA TACTCTGCCA AACGTCATAA TTTTTATAAA AAAGTGCAAG       960
     TGTACCGTAC TGCCGCGCTG ACGTGGAATC TATCGCTGAT CATCACGCCA TCGGTATGTC      1020
     CATACTCTGC CAAACGTCAT AATTTTTATA AAAAAAGTGC AAGTGTACCG TACTGCTGCG      1080
     CTGACGTGGA ATCTATCGCT GATCACCACG CCATCGGTAT GTCCATACTC TGCCAAACGT      1140
     CATAAGTTTT TATAAAAAAA AAGAGTGCAA GTGTACCGTA CTGCCGCGCT GACGTGGAAT      1200
     CTATCGCTGA TCATCACGTC ATCGGCACTT ACATACGCTG GCCAACGCAT CGCCAAAGCC      1260
     TCTATATACA CTTATATATG TGAGCATACA ATATCAACTA CAATCCAATA CATCCACGTA      1320
     CTGTACCGCC TCGTTGGCAT GGAATCAAAC GCTGATCACC ATGCCACCGT GGTAAACAAA      1380
     CAAAGCACCA AAGCCTCTCT AATACATTGT ACACTCAAAA CGCACACTGC CATACGTCGG      1440
     CGAAAAATCA AAACATAAGC AAAAATCATT TCAAACCAAG CGAGGCTCAT TCTGCGTACC      1500
     ACAACGACAA CGACACTGCA TGTGTAGTGG CGCACCCATG TCTGGGTAGC CGAGGTAAGG      1560
     GGAAAACGCT TGAGTATCGT CAAGTGTTCT TGCCTTTCAC TCTTCTACAA TGGGTTGCTA      1620
     CGCTCATGTA TTGCACATTC AAAATAACCA AAACAAATGT ACTAAAGAAG TCGACATATA      1680
     CAGATATATT TTGTTTCCTT TCATTGTGTA ATTTTGTATA TCAAACAAAT ACTAATACCA      1740
     ATCACATTGC AGAATATAAA AGGGAAAATA TAAAGCCAAA GACAGACACC CATACACTCT      1800
     AGTAAACAAG AAATTTGTTC ATTATTTTTC AATCATACAT AATATACTAA GTAACCTCAA      1860
     ATTTAATGTC AAAAAAGTTC GTTTACAACC TTAGGAAAAC TACACGTTCA GTTGTTGGAG      1920
     TTCCACCAAA CACTAATAGG CCCCCACATC CCGTTAGACG TCCTGACTCC CTTCTCCCGA      1980
     TTTCGGAAGA ACCCAAATCA ATATCTTCCC AAACCCCCAA TATGGACTCG GGAAACGATT      2040
     CTGCCCGCCC CACTCCATCC CCTCTGGCGC CCACTGTCAG TGGTATTAGC TCCTTAATTT      2100
     CAACTACGTT CAAGCCTAAA GATATCATGG CATTTGTTGA GCATTTGCCA ACCTTTGATG      2160
     GTACACCTCG TCTATTGGAC AGGTTTATCA CTAGCGTAGA AGAAATCCTG ATGCTCATCA      2220
     GGGGAGCTGA CCAAACACCG TATGGCCTGC TTACTCTGAG GACCATCAGG AACAAAATCA      2280
     TTGATAGGGC CGACGAAGCC TTGGAACTGG CAAATACCCC CTTGGTTTGG GATGAGATTA      2340
     AAAGCAATCT CATCCGCCTC TACTCGAGCA AGAAAAGCGA GGCCAACTTG TTAAGCGAGC      2400
     TTAACACATT TTCGGACAAC CTGACCTTGG GCCAACTGTT CTTTGGTATA TCAAAGGTGA      2460
     GAAGCCAACT CTTCTCCATA CTCAAAAACA GCGAACACAA CAACACTGTT GTAGATGCAA      2520
     AAAAGGTTGT CTACAACGAG GTTTGTCTCA ATGCTTTTAT GACTGGTTTG AAGGAACCTC      2580
     TCAAGACTTT CGTCAGGATA AAGTCCCCTT CTACACTTGA ACAGGCGTAC GAGCAATGCC      2640
     AAATAGAGCA GACCTTATAT AGGGCACAAA ACAAGCGAAC CAACAGACCA GAGCAGGGAC      2700
     CCAATGGATC AGACAATAAA ACCTACCGAA ATAGCTACGA CAGCAATTAC CGCAGCGGAC      2760
     GTAACGACCG AAATGACCGT AGGGGACCCT ACTCTAACTC TAACTCTAAC TCTAACTCTG      2820
     GCCAAAATAG ACCATTTAAT TCACACAATC GCACACCCCA ATCCGGCACC AAGGACAACC      2880
     GGGCCAATAC ATCAAACCCC TTTCGAGCAC CTTCACATAG TTTGAATAAT ATAGAGGAGA      2940
     ACCCTCAACC TGATTCGAAT TTTCAGCAAA CGGCCTCGGG AAACCAACAG GGTACATAAG      3000
     CCCAGCCACG CACAACCCCT CGCTTCCTTT TATAAAAATC AAACTATCCC AGACAAACCC      3060
     CCTGAAGTTT TTAATTGACA CAGGCTCTAC ACACTCCTTC ATCGACCCAA AATATGTCGA      3120
     CCCTAGGAAC TGTGTGACCT TAGATACGCC CATAACACTC AAAACAGCCC TGAACAGTTT      3180
     TAAAATATAT CAAAACGTCT CTATACCATT TCCACCGGAA TTCCAAATCA CGGGCAAAAT      3240
     GACCCTTCTA CCTTTCAAGT TCCACTCTTA TTTTGACGGA TTGATAGGAA TGGACTTATT      3300
     ATCTTACCTA AAAACAGAAA TAGATTTACT TAACCTAAAT CTAAAAACCC CAAGTACCAT      3360
     TATACCCTTA TGGACCCACA GTAACTCAAC TTCAAACGTA TTTAATATCT CTGGACATAC      3420
     GAAAACTATT TTGCCACTAC CAGTGGAAAC CAAACAGGGC GACTTCTACA TCGATTCAAT      3480
     TACAATCAAT GATGACTTAA TAATATCAGA CGGGATTTAT AATGCCCAAA ACAATATTGC      3540
     TAATTTCGTT ATCACAAACT ATAGCGAGAG GGATCAGTTA TTGTACCTCG AGAGCCCGAT      3600
     AAAAGGCATG CCATACTCCA CGGCCAACAA TGTTGAACTT TTCAGTATCA CTTCAGACAC      3660
     CCCACAGCCC CAAAACTCCG CAGCGTCGTT ACAAGCCCTT GGCGTCGATC ACCTCTCCTC      3720
     TGAAGAGAAA CAAAGCCTAC TTTCACTTTG CAAAAGTTAT CTAGATATCT TCTACAATGA      3780
     AGACAAATCA TTGACCTTCA CCAACAAGAT TACACACACG ATTAAAACCA CGGACGACAC      3840
     CCCCATTCAT ACAAAATCTT ATAGATATCC TTACATTCAT AAAGAGGAGG TCAAAAAACA      3900
     AATAGAGGCA ATGTTAAATC AGGACATTAT CAAATCCAGT TATTCCCCGT GGAGCGCCCC      3960
     CGTCTGGGTC GTCCCAAAGA AAATCACTCC TACGGGAGAG CAAAAATGGC GTCTAGTTAT      4020
     CGATTATAGA AAACTCAACG AGAAGACTAT ATCCGATAGA TATCCAATAC CTAACATCGC      4080
     GGATATCTTA GACAGATTGG GCAAAGCCAA ATATTTCTCC ACACTTGATC TGGCAAGTGG      4140
     ATTCCATCAG ATAGAAATGA ATCCCGACGA CACACCCAAA ACTGCATTTA CAGTAGAGGG      4200
     GGGCCACTAC GAGTTCATTA GAATGCCGTT TGGCCTCAAA AATGCCCCAG CCACATTCCA      4260
     AAGGGTGATG GACAATATTT TTGGAGACCT TATCGGAACT ATCTGCCTAG TTTACCTAGA      4320
     TGATATAATA ATTTTCTCAA CCTCCTTACA AGAACACTTC ATACACTTGA AAACTATTTT      4380
     TGGAAGACTC AGATCTGCCA ACTTTAAAGT CCAACTCACA AAATCCTACT TCCTCAGGCG      4440
     GGAGACAGAA TTCCTTGGCC ACATCGTTTC ACAAGAAGGT GTTAGGCCAA ATCCCAATAA      4500
     GATCGAAGCT ATAAAAAACT TTCCATGTCC CCACAGTAAA AAGTCAATTA AGTCTTTCCT      4560
     AGGCTTGTTG GGATATTACA GAAAATTTAT CAGAGATTTT GCGAGACTTA CCCAACCCAT      4620
     GACACAAAAA TTAAGGGGAA ACAATAAATC GATCATAATA GATGATGAAT TCAAAAAGGC      4680
     CTTTGAATAT TGCAAAACCT TACTGTCTAA CGACCCAATC CTCCAATACC CGGACTTTAC      4740
     AAAACCTTTC ACACTAACCA CGGACGCAAG TAATTTCGCA ATAGGAGCTG TCCTATCCCA      4800
     AGGTCCGGTG CATAGTGATA GGCCCGTATG TTTTGCTAGT AGAACCTTGT CGGCTGCGGA      4860
     AACAAATTAT TCCACAATTG AGAAGGAAAT GCTGGCCATT ATATGGGCGG TCCAATACTT      4920
     CAGACCCTAC CTCTTTGGCA GGAGATTCAC TATAATCACC GATCACAAAC CACTAACTTG      4980
     GTTAATGAAT TTCAAACAAC CAAATTCTAA AATAGTTAGG TGGAGACTCC AGCTTCAGGA      5040
     GTACGATTTC GAAGTCGTCT ACAAGAAAGG CTCTCAAAAT GTAATTGCTG ATGCTCTCAG      5100
     TAGACCAGAG GCCTCTGTCA ACCATAACGA AGCCCTATCA ATTCCTCAAA ATGTTTGCCC      5160
     CATCTCAGAG AAACCCCTTA ATGATTTTAA TATTCAGCTC CTGTTCAAAA TAACCCCAGA      5220
     TACAAATAAC GCCACACTGA CCCCGTTTAA ACACAAACTT AGGAGGGAAT TCTGTAAACC      5280
     CAATTTTCAG TATGACGACG TAGTTTGCAT TCTTAGGCAG TCGTTAAAAC CAAACAAGAC      5340
     ATGCGCGGTA TTTGCCCCCG ACCACATTTT TCAAATGGTG GAACAAGCCT ACCAAACCTA      5400
     CTTCTCAGCC CACAGTCAAT TTAAACTCAT TAGATGTTTG ATCTTCCTCC CCGAAATTAC      5460
     TGATAGTACG GAGATCGAAA AAATTATAAC CGACTATCAC TATAATAGTA ACCATCGAGG      5520
     GATCGATGAA ACATATTTAC ACATAAAACG ACAACAGTTC TTCCCACATA TGAAGGAGAG      5580
     AATAACTCAG TTAATTCGAA AATGTGAAAC ATGTTTAAAA TTAAAATACG ACAGACAACC      5640
     TCAAAAGATC ACTTACCAAA TATCCGAACT ACCTTCAAAA CCGTTGGACA TCTTACATAT      5700
     AGACATTTAT ACTATTAACA AAAATTATAA CCTTACTATT ATCGATAAAT TTTCTAAATT      5760
     TGCGGCTGCC TACCCTATAA CTAATAGGAA TTGCATTAAC GTAGTTAAAG CCTTAAAACA      5820
     TTTCATTTCC CAATTTGGTA TTCCCAAAAA GCTGATCTAT GATCAGGGAG CAGAATTCGC      5880
     TAGCGATATG TTCAATAAGT TCTGCACTCA ATTTAACATT GACCTACACG TTACGTCCTT      5940
     TCAACAATCC TCTAGTAACT CTCCCGTTGA ACGGCTTCAC TCGACACTAA CTGAGATTTA      6000
     CAGAATAATA CTTGACGTCA GGAAACAACA GAAACTCAGT AGCGAGCATG ACGAGATAAT      6060
     GTCCGAAACC CTAATCACAT ATAATAACGC TATTCATTCT GCAACTAAAC ATACCCCCTT      6120
     TGAACTATTT AACGGACGTA CTCATATATT CAACCAAACA ATCCAGTTCA ATAACGAACA      6180
     CGACTACTTA ACGAAATTAA ATGAATTTCG CGAGAAGTTG TACCCCCTCA TCACGGACAA      6240
     ACTTTCAAAT GACGTAGTTA GGAGAACCCT AAAATTAAAT GAAACCCGAA CAGACCCCGT      6300
     AGACCTACAA CCAGACACTT TAGTCCTTAG GAAGGAAAAC AGACGTAATA AGATTACACC      6360
     CAGGTTTTCG ATTCACAAAG TCAAACACGA CAAAGGTCAT ACATTGATAA CTGCTAGGAA      6420
     TCAAAAACTA CACAAATCAA AAATTCGAAA AACAGTTTTG AAAAAAGACA AAAGCAACAA      6480
     CGTACCCAAC ACTGATAATA ACTGACCCCA CTACCTCTTA ACTTACCATT TCAGGTTCAC      6540
     CCTTGTGCCA ACTCAGGCTA TCCATGTCCA TTATTTAAAT GATAACGCCC CTATAGCCAA      6600
     GATAGAACTA GGGAAAGCCT TACTAATTGA GAGGTACAAA ATAATTAGTC ATGTAATCAA      6660
     CCTACAAGAC TACAGCAGAT GTATGGAACA ATTCCATCTG ACCATTAATA AATTTAACCC      6720
     CGATTCCACG TTGACGGACT CCGTCACAAT TTTAAAAACC AAATTAACCC AAGCCCAAGT      6780
     AAAGCTCAAA GCCCTTACAC CTTCATATAG AAACAAACGG GGTTTGATTA ACGGATTGGG      6840
     GAGTCTAGTA AAGGTGGTTA CCGGCAACAT GGATGCCAAC GACAATAAAG AAATACATGA      6900
     AGAACTTGAC AATATAAAGA AAAATTCCGA AGTCAGTAAC GACAATCTCC AAAAACAAGT      6960
     AATGTTTAAC AACGAAATAC TTATCCGGTT CGAAAATATC ACGGACCATA TAAATAATGA      7020
     ACAAATTTTG ATAAGTAAAT TCTTTGATAC CTCACAAAAC AAAATATACA AACACTTAAA      7080
     CTTACAAGAT ACCCTTCTGG AAGAAATACA ATATTTAAAT AGGATTAATT ATAACATAGA      7140
     ATTATTCATT AACCACCTAA ACGACATAAC AGAAAGTATG CTATTGGCGA AAATAAATAT      7200
     AATTCCCAAG TTCATCCTAA ATGAACAAGA AATGGATAAA ATAAAAACAA TACTGGAAAA      7260
     ACAAAATATC ACAGTCAAAA ATGAACAAAG TATATACAAT TTCCTACAAA TGAATACACT      7320
     AAATTACGAA CAAAAGATTA TTTTTAATAT CAAAGTCCCA ATTTTTAAAC AACCTTTTCA      7380
     TACCCTCGCC AGACTAGTTC CATTACCAAT AAATAACACA TATTTTGTAA TAACCCCAAA      7440
     TTACCTAGCT TATAATATTA ATAATAAGAA ATTTCATATG ACCCGTAAAT GCCCCAAACT      7500
     GGATAATACA TTCTTGTGCG ACGAGAACTT CTACGTTGAT ACACCACAGA ACAACACATG      7560
     CCTGGAACAC CTTTTGAACG GAGAAAACAG TTCCTGCGAT GTACGGGAAA CCGGCCCCAT      7620
     CACCGACGTG TTCGAGGCAG AGAGAGGTTA CATCTTCGCA TTCAACGTGA ACAAACTGAA      7680
     GGTATCCCTA ACAAACGGCT CCGAGCTCTC AATAATGGGG TCAGCCATCA TCAGATACAT      7740
     TAACGAAACA ATACAGATTA ACGGTATCGA TTACGACGGC ACGGTTGACA CGTTCCCTGA      7800
     ACAGACGGAT TTTGATCTTC CCCCCATGCG AAAAGTAACT AGGAATACCA CTATTACGGT      7860
     ACTAAGCCTA GAAAAACTGC ACCTCGAAGC CACCCAAACA ATGGATAAAA TCCTGGCCGT      7920
     CCATCACAAT ACTATACAGC ACACCTGGAC ACTCTACACT CTGCTCGGAT TGGTAACGTT      7980
     CCTAGCAGTC ATCTTATGGC TGCACCGACG AACGAAACAC ATCGTCCACA TCCACGAGGA      8040
     TCATCACGTA CCAATCTACG CGTCATCCAT ACCTTCGCTA TGGCCGTCAC TTCGAACTGG      8100
     GGGGGGAGGA GTTACCACCC CACCCCCTAA ACCCCCACGC CTCTAAACAA ATCATCGGAC      8160
     ACTCAACCGG GAAGACGGCA ACTGGAACAC CGCATCCGGC CGAATGCTGA CATTCCGGCC      8220
     GAATGCTGAC ATTACACAAA AGTCGCACTG CAACATTGTC CCCAGCTAGC CAGCCACATG      8280
     CCGAGTCGGC ATGTTCATTA TGCTTACAAT TAAGAACCTA TGTACTTATG TATAAGACGA      8340
     AAACGGAGGA CTCGAGTAGC CACTCTCTGA CAATAAACTT GATACTGATT TTGAACTTCA      8400
     AGAAAGTCAG TCGTATTCTT TATTGGAAAT CTTCACACTA CAACTATCTG CTGAAACTTA      8460
     AAAACCTTCA TACATTTACA CATCATATCT TCACAAAAGG CTCCACCCTC GATCACGGAC      8520
     TTAACT                                                                 8526
//
ID   DMBLPP     standard; DNA; INV; 5034 BP.
XX
AC   Z27119;
XX
DR   FLYBASE; FBgn0014947; flea.
XX
SY   synonym: blastopia
SY   synonym: Kermit
XX
FT   source          Z27119:372..5405
FT   SO_feature      five_prime_LTR ; SO:0000425:1..276
FT   SO_feature      three_prime_LTR ; SO:0000426:4766..5035
FT   SO_feature      polyA_site ; SO:0000553:5006..5011
FT   SO_feature      polyA_site ; SO:0000553:5019..5024
FT   SO_feature      CDS ; SO:0000316:760..4761
FT                   /db_xref="FLYBASE:FBgn0043491; flea\polyprotein"
FT                   /db_xref="SPTREMBL:Q24262"
FT                   /protein_id="CAA81643.1"
FT                   /translation="MFTRTPPTNKKLNTDQIQAILENESEDESRKEKMNEEDQKLAPVG
FT                   EAEAKKQNKDASAKVEEKFEQMMNTLTQSMLAKSKQEGQVIIAAEKFEKVVSDCDGKSI
FT                   PIKKWFEIFEKNAEAYELSEKQKYVQARSKMIGSAELFLESECVSGYTELKELLIEEFS
FT                   GSYNSAVIHKKLQDRKKKREETLHDYLLQMKKIAALGEVETVALITHIVNGLDIKKEYK
FT                   GAMLRCKTLKELKQEFEIYESLNIVDKPNIQPKPKQITQGVKADHCFNCGSREHKRKDC
FT                   TLPTKCFSCNQEGHISSKCPEKVNSMRIHVDSARTKPVIINGIIINCLVDTGSDVTIIK
FT                   EAIFKKMKDVDLNRTATVLRGLGNASTQPIGCFRALIKTDQVEASHNVLVVHDSKFSCD
FT                   GIVGHDFISKFRLICSAEGYTFLDLEADKKQAVEYSQMFNICEESSFTVAPQYREDVER
FT                   MIERTYETPPKQIKQCPVELKIIPDGVIKPFRHGHTRLSEEEAIAVKKQVEEWVEQSIV
FT                   RKSTSNVASRIVVVRKKDGTLRVCVDYRKLNTMVLMDCFPVPIMEEVLEKLQSAKWFTT
FT                   MDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRFVQFIFQELINS
FT                   NIMQLYMDDIIVYAATPEECMEKTEMVLKRAAEFGLKIKWKKCNFMQRRIHFLGHIIEG
FT                   GQICPGKEKTSAVNSFGTPQNVKAVQGFLGLTGFFRKFIPGYAQIARPLTDLLKKDAIF
FT                   NIGPVEQQSVNKLKEILVNEPVLRIYSREAETELHTDASKDGLGAVLLQKFEGSFHPVC
FT                   FWSRKTTKAESNRHSYYLEVKAAYLALKKFRHYLLGVPFKLVTDCVAFKQTTKKADVPR
FT                   EVGPWILYMQDFNFQPEHRAGERMRHVDFLSRHPQACMMITSELTARIKKSQQNDDSIR
FT                   AILEILKDRLFQPYKLKGGLLYSMVNGNELLVVPALMEREVIQSAHEVGHLSLQKTMHS
FT                   IQQQFFYFLIWEYKVKKLISNCIKCIIHSKKLGKQEGYLNCIDKGDAPLHTLHIDHLGP
FT                   MDSSAKQYKYILATVDAFSKFVWLFPTKSTGQEEVVKRLTDWSNIFGFPKRIVSDKGTA
FT                   FTSGAFEQFMSSHNVEHVCTTTGVARGNGQIERVNRLILAIISKLSSDEPSKWYKYVPE
FT                   VQKAINCHVHSSLKLSPFEVMFGTKMYTRVEDRLLELLQEEVVCQFNEDRYEMRQLVKR
FT                   NIEQAQKDYKRNYDKKRRAEYKYKAGDLVAIKRTQFVAGRKMASGYLGPYEVTGVKDNG
FT                   RYDVKKAANVEGPNVTSTSCDNMKLWKYIAENADLLSSGSDDDDQEGRM"
XX
CC   Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 5034 BP;  1719 A; 938 C; 1145 G; 1232 T; 0 other;
     TGTAACATGA GTAAGGCTGA AGGCTGGCAA CAACCCGGTT GGCAGCGCTG TTGAGCAGCA        60
     ACATGATTGT CGGAAATCCA AGTTATCGAC AATCAGTCAT CGAAGGACGA TCGCAGGCAG       120
     CAGTAGAGGC GAGTGGAAGT CAGCGTTGCA GTCAGTCGAG TTCTCAGCAG CAGTCGTTCG       180
     GTCCACAAAC TAAGAAATAC TTTATATAAT TACCGCATTT AGAATTAAAC TAATAATTAA       240
     ATTAATAATA AACAATAATA ATAAACAATC TTACATGGGG GCTCGTCCAG TCCTAAATCG       300
     GTTATATGAA GGTGCAGTTG TTTAAAGAAA AAAGACATTG TTGTGTGCGT GGGTATAGTC       360
     TTTAAAACGT TGTAAAGTTG TGGCTATATC TATTGCATTT AAAGTTGGAA AAATCAGTTG       420
     TACAGATTTT GTTTGAACAC AAGTCGGTAA AAGTCGGGAA AGCTGCTAGA GAGAACTGAT       480
     AAAGTTGAAA TTGTCGTGTG CGTGGATTTA GTCTTTAAAG TTGTAAAGTT ATGGCTACGT       540
     CTACTGCATT GAAAGTTGAA AAAATCGATT GAACTCATAC AGACTCAAGT CGTTTTGCTG       600
     TTGTGGAATT TAAAACAATT AAATTGCAAA GGTGGTGAAA TTCGTTTCTA ACGAAAATCA       660
     AAATTTGTCT TTTAACCGGT GGCGCCGTCT GCAAAATCGA CTACCGTCGC GCCGTTAGAA       720
     CATTGTCGTT GTTTGCTGGT GTTAGTGCCT TGTCGCGGAA TGTTCACACG TACACCACCT       780
     ACAAATAAAA AACTTAACAC CGACCAAATA CAAGCAATTC TAGAGAACGA AAGCGAGGAC       840
     GAAAGCAGAA AAGAAAAAAT GAACGAAGAA GATCAAAAGT TGGCGCCTGT AGGAGAAGCA       900
     GAGGCAAAGA AGCAGAATAA AGACGCTAGT GCTAAAGTCG AAGAGAAATT TGAACAAATG       960
     ATGAATACTC TAACCCAGAG CATGTTGGCA AAATCTAAAC AAGAGGGGCA AGTAATTATC      1020
     GCTGCAGAAA AATTTGAAAA AGTTGTAAGT GACTGTGATG GCAAATCAAT TCCTATTAAA      1080
     AAATGGTTTG AAATTTTTGA GAAAAATGCC GAGGCATATG AACTTTCGGA GAAACAAAAA      1140
     TATGTTCAAG CCAGAAGTAA GATGATTGGA TCAGCAGAAC TTTTCTTAGA ATCTGAATGT      1200
     GTCAGTGGAT ACACTGAACT CAAAGAGTTA CTAATTGAAG AATTTTCAGG CAGCTATAAT      1260
     AGCGCCGTTA TTCACAAAAA GTTGCAAGAC AGGAAGAAGA AGAGGGAGGA AACTCTACAC      1320
     GACTATTTGT TACAAATGAA GAAAATAGCA GCCTTAGGTG AAGTTGAAAC AGTTGCTTTG      1380
     ATAACTCATA TCGTAAACGG CCTCGACATT AAAAAGGAGT ATAAGGGTGC TATGCTCCGT      1440
     TGTAAAACTC TTAAGGAATT AAAGCAAGAA TTCGAAATCT ACGAGAGTCT GAATATTGTT      1500
     GACAAGCCGA ATATTCAACC AAAACCAAAG CAAATTACAC AAGGTGTAAA AGCAGATCAC      1560
     TGCTTCAACT GTGGTTCGAG GGAACACAAA CGAAAGGATT GTACACTTCC TACCAAATGT      1620
     TTCAGCTGTA ATCAAGAGGG CCATATCTCA AGCAAGTGTC CGGAAAAAGT AAACAGCATG      1680
     CGCATTCACG TTGATAGTGC ACGAACAAAG CCAGTAATCA TAAATGGGAT TATCATCAAC      1740
     TGTCTGGTGG ACACAGGATC AGATGTGACC ATAATTAAAG AAGCTATATT CAAGAAGATG      1800
     AAAGATGTTG ATTTAAACCG CACTGCAACA GTATTGCGAG GTTTGGGAAA TGCCTCAACA      1860
     CAGCCGATTG GATGCTTCAG AGCATTAATC AAGACCGACC AGGTGGAAGC AAGCCACAAC      1920
     GTTTTAGTCG TCCACGATTC TAAATTCAGT TGCGATGGAA TAGTGGGACA CGATTTTATC      1980
     AGCAAGTTTC GTCTTATCTG TAGTGCAGAA GGCTATACTT TTCTTGACCT GGAAGCAGAT      2040
     AAAAAACAAG CGGTTGAGTA TTCCCAAATG TTTAATATTT GTGAAGAATC TTCTTTTACA      2100
     GTTGCACCAC AATACCGAGA AGACGTTGAA CGCATGATAG AGAGAACATA CGAAACACCA      2160
     CCCAAGCAGA TAAAGCAATG TCCAGTCGAA CTCAAAATTA TTCCTGATGG CGTGATTAAA      2220
     CCCTTTCGCC ATGGACACAC CCGACTATCT GAAGAAGAAG CTATAGCTGT AAAGAAGCAG      2280
     GTAGAGGAAT GGGTCGAGCA GTCAATCGTC CGTAAATCTA CATCAAATGT TGCCAGTCGC      2340
     ATAGTCGTTG TCAGGAAAAA GGATGGTACC CTACGCGTTT GCGTGGACTA TAGAAAATTG      2400
     AACACCATGG TTCTGATGGA TTGTTTTCCG GTACCCATAA TGGAGGAGGT GCTTGAAAAA      2460
     CTGCAGAGTG CCAAATGGTT TACAACCATG GACTTACAGA ACGGATTTTT TCATGTGGCC      2520
     GTAGAAGAAG CCAGCAAGCC GTACACAGCA TTTGTTACCC GAGAAGGCTT ATTCGAGTTT      2580
     AACAAAGCGC CCTTTGGTTT TAAGAATTCC CCAGCAGCGT TTATACGGTT CGTTCAATTT      2640
     ATTTTTCAAG AACTAATCAA TTCCAATATA ATGCAGCTAT ATATGGATGA CATAATTGTA      2700
     TATGCCGCTA CCCCAGAAGA ATGCATGGAA AAGACGGAAA TGGTACTTAA GAGAGCTGCA      2760
     GAATTTGGTC TAAAAATAAA ATGGAAGAAG TGCAACTTTA TGCAGAGGCG AATTCATTTC      2820
     CTGGGACATA TTATCGAAGG TGGACAAATA TGCCCTGGAA AAGAGAAAAC ATCAGCAGTG      2880
     AATTCCTTTG GAACACCTCA GAATGTAAAA GCCGTTCAAG GATTTCTGGG TCTCACAGGA      2940
     TTCTTCAGAA AATTCATACC TGGATACGCC CAAATTGCGA GACCACTGAC GGACCTATTA      3000
     AAAAAAGATG CCATTTTCAA CATTGGACCA GTAGAGCAGC AGTCGGTGAA TAAGCTGAAA      3060
     GAGATTCTGG TAAACGAACC AGTATTGAGG ATCTACTCAC GAGAAGCAGA AACCGAACTT      3120
     CATACAGATG CCTCTAAGGA CGGGTTAGGA GCCGTTTTAT TGCAGAAGTT CGAAGGCAGT      3180
     TTTCACCCAG TCTGCTTTTG GAGCAGAAAA ACTACAAAAG CCGAATCAAA TCGTCATAGT      3240
     TATTACCTTG AAGTAAAAGC CGCATACTTA GCTCTGAAAA AGTTCAGACA CTATTTATTG      3300
     GGAGTCCCTT TCAAGCTCGT CACGGACTGT GTCGCATTTA AACAGACAAC AAAAAAAGCA      3360
     GATGTCCCAA GAGAAGTTGG CCCATGGATT CTCTATATGC AGGATTTTAA TTTTCAACCC      3420
     GAACATCGTG CAGGAGAAAG AATGAGACAC GTTGATTTTT TAAGCCGCCA TCCCCAAGCA      3480
     TGCATGATGA TAACATCCGA GTTGACAGCA CGTATTAAAA AGTCGCAGCA GAACGATGAT      3540
     TCAATTAGAG CAATCCTGGA AATTCTAAAA GATCGTCTAT TCCAACCCTA CAAGCTAAAA      3600
     GGTGGCCTGT TGTATAGTAT GGTCAATGGC AATGAACTAC TGGTTGTCCC TGCACTAATG      3660
     GAGAGGGAGG TGATTCAAAG CGCACATGAA GTTGGCCATT TGTCGTTGCA AAAGACGATG      3720
     CATAGCATAC AGCAGCAATT TTTTTATTTC CTCATTTGGG AATACAAGGT AAAAAAGCTA      3780
     ATTTCTAACT GTATAAAATG TATCATCCAC AGCAAAAAGT TGGGAAAGCA GGAGGGATAT      3840
     CTAAATTGCA TAGATAAAGG AGACGCACCG TTGCACACAC TACACATCGA TCATTTGGGG      3900
     CCAATGGATT CATCGGCCAA ACAGTATAAA TACATTCTGG CAACAGTCGA TGCGTTTTCA      3960
     AAGTTTGTCT GGTTATTCCC AACCAAATCA ACCGGACAGG AAGAAGTGGT CAAGAGGCTG      4020
     ACCGACTGGT CAAACATTTT TGGTTTCCCT AAGCGAATTG TTAGCGACAA AGGAACGGCC      4080
     TTTACGAGTG GTGCGTTCGA ACAATTTATG AGCAGCCATA ACGTGGAACA CGTCTGCACA      4140
     ACTACTGGAG TGGCCAGAGG CAACGGCCAG ATAGAACGAG TAAATCGTTT AATTTTGGCA      4200
     ATAATATCAA AGCTGTCTTC AGACGAACCG TCGAAGTGGT ACAAATATGT GCCTGAGGTA      4260
     CAAAAGGCGA TCAACTGTCA CGTGCATTCA TCACTGAAGC TGTCACCATT TGAGGTCATG      4320
     TTTGGCACCA AGATGTACAC CCGAGTTGAG GATCGGTTAC TGGAACTGCT CCAAGAAGAA      4380
     GTGGTCTGTC AATTCAACGA GGACCGCTAT GAGATGAGAC AGCTGGTAAA ACGCAACATC      4440
     GAGCAGGCGC AGAAGGACTA CAAGCGCAAT TACGACAAAA AGCGCCGAGC TGAATACAAA      4500
     TACAAAGCAG GTGATCTGGT TGCAATTAAA AGGACCCAAT TTGTAGCTGG CCGCAAGATG      4560
     GCAAGCGGGT ATTTAGGTCC ATACGAAGTC ACAGGGGTCA AAGACAATGG CAGATATGAC      4620
     GTTAAAAAAG CAGCAAACGT CGAAGGACCC AATGTCACAT CCACCAGCTG TGACAACATG      4680
     AAGTTGTGGA AGTACATAGC CGAAAATGCA GACCTATTGT CATCCGGGTC GGATGATGAT      4740
     GATCAGGAGG GCCGAATGTA ACATGGAGTA AGGCTGAAGG CTGGCAACAA CCCGGTTGGC      4800
     AGCGCTGTTG AGCAGCAACA TGATTGTCGG AAATCGAAGT TATCGACAAT CAGTCATCGA      4860
     AGGAACGATC GCAAGGCAGC AGTGGAGTAG GAGTGGAAGT CAGCGTTGCA GTCAGTCGTG      4920
     TTCTCAGCAG CAGTTCGTTC GGTCACAAAC TAAGAATACT TTATATAATT ACCGCATTTA      4980
     GAATTAAACT AATAATTAAA TTAATAATAA ACAATAATAA TAAACAATCT TACA            5034
//
ID   OPUS    standard; DNA; INV; 7521 BP.
XX
AC   AY180918;
XX
DR   FLYBASE; FBgn0003007; opus.
XX
SY   synonym: nomad
SY   synonym: yoyo
XX
FT   source          AY180918:1..7521
FT   SO_feature      five_prime_LTR ; SO:0000425:1..518
FT   SO_feature      three_prime_LTR ; SO:0000426:7004..7521
FT   SO_feature      CDS ; SO:0000316:1578..2831
FT                   /protein_id="AAN87270.1"
FT                   /translation="MEETLRALSESLNALTNVVTGIKEDIKKNNDRLAILEQERGNAD
FT                   PTVDQPQPLVRARTEYELREISVLPDCVKELQAFEGRQEAYLSWINRAQSILTEYDLI
FT                   KTRPLYRAIVLHIRQKIRGHADMALAAYGVQDDDWDDIKRVLALHYADKRDLRTLEHE
FT                   LGAMCQGSRPLDRFYMDVNGHLSLILNNLKARNHPREVVNALIETYRDKALDVFIRGV
FT                   GRDCSKHLLVRSPKNLPEAYSFCMGLQNVMSRNFTAQNYQPSGAPRFAGPYQHQARPP
FT                   FRTPFSPGSGRFSQNSYRTQGPRQAIKMESNRSGQSYQSGYSGRQEEGSGIKRMSEGN
FT                   NPFQKAQRLYHMELAPPPLAPAASGDNQGRSHEGYYDDESQAVERSNNYPPQKNVEGV
FT                   TDAPHNLETEGGANFMTNASPVYRT"
FT   SO_feature      CDS ; SO:0000316:2972..5983
FT                   /protein_id="AAN87271.1"
FT                   /translation="MITHRLVGKFFKPLGNDSDITFFVLPNLHSFDGIIGDDTLKDLK
FT                   AIVDRKNNCLIITPGIKIPLLARASINVNPLLAAEHPDGTQEILNSLLGEFPRIFEPP
FT                   LSGMSVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQDGIIRPSNSPYN
FT                   SPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLD
FT                   LTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKV
FT                   CYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTAD
FT                   GIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYAN
FT                   IKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVL
FT                   SQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDH
FT                   QPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSRIPPQLNQLSTDL
FT                   DANPEDDMQSLATAHSALHDSSRLIPHVESPINVFKNQLIFDTTRSKYLCEHPFPGYT
FT                   RHLIPLKDGSLADLTNSLQSCLRPVIINGVKIPEAHLQRFQSICLANFLLYKIRITQR
FT                   LVADVSGAEEICEIIEKEHRRAHRGPTEIRLQLLEKYYFPRMSSTIRLQTSSCQCCKL
FT                   YKYERHPNKPNLQPTPIPNYPCEILHIDIFALEKRLYLSCIDKFSKFAKLFHLQSKAS
FT                   VHLRETLVEALHYFTAPKVLVSDNERGLLCPTVLNYLRSLDIDLYYAPTQKSEVNGQV
FT                   ERFHSTFLEIYRCLKDELPTFKPVELVHIAVDRYNTSVHSVTNRKPADVFFDRSSRVN
FT                   YQGLTDFRRQTLEDIKGLIEYKQIRGNMARNKNRDEPKSYGPGDEVFVANKQIKTKEK
FT                   ARFRCEKVQEDNKITVKTRSGKIFHKSDLRN"
XX
CC   Sequence from P1 DS01219.2:861..8381 provided by Guochon Liao
CC   Berkeley Drosophila Genome Project.
XX
SQ   Sequence 7521 BP;  2322 A; 1740 C; 1677 G; 1782 T; 0 other;
     AGTTAAGAAC CCTCTTCTTG CGCTCTTCGT CAGGACTCAC CAGCGCTCGG CTCTCGTGTT        60
     TTCGGGCCCC GTCAGCAGGC GACTCGGGGC CTGTCTAGTA ACATGTTCGT GTAAGTTACG       120
     AACCCTCTTC TTGCGATCTT CGTCAGGACT CACCAGCGCT CGGCTCTCGT GTTTTCGGGC       180
     CCCGTCAGCA GGCGACTCGG GGCCTGTCTA GGAACATGTT TGTGTATGTG TGCATTCGGA       240
     ACAAGTGCCG TTGGTCGCAC TCAGGGTGAG GGGTCAACGG GGGAAGCGGA TATAAAAGCA       300
     GCGGGGCGGG AGAAGAGGTC CCAGTCTCGA ACGGACACAT AACGGAACCG CTAGCAGATC       360
     GCGAACTGAA TCTTAAAATA AAGCTAATCG TAAACTCGAA CCCTCTTAAC TATCTTGACT       420
     ATTATTTGGA GAACCACAGC ATGTTGGTTG TCATATCAAG GTGAGGTATG CGGCAGCGAG       480
     TGCCGAGAAC CCTGATGCAA GTGGAACTTG CGTTAACTGG CGCCCGAACA GGGACCGGCA       540
     ATGTCCGGCC GATAAAAGTG ATACGAAAAA ATTGTGGAAA TTTGTGCGTA AAAATAGTGG       600
     TGGTGTGCAT AAGTCAGATT AAGATCTGAA ATCCATAAAT GAAAAAGAAG TGCTGCGTGA       660
     GCTGTGTATA AAATGATAAA ATAGCAATTA CCCGCTGCCG GGGGGAACTA CGCCCATCCC       720
     GGGGCGCAAC AAATATTGCA TAATTCAATA AAAGGTGTAA AATTTCTAAA ATAAAAATGT       780
     AAACCTATGT TGCGCCAAGA CCTAATTTAA ATTAATAAAA CAACGACCCG CTACCGGAGG       840
     ACGCCACGTC GCCCATGCCG AGCGCAAAAG TTGTACGATA CCTATAACAT AATTAAAACA       900
     CGATCAACCC ACTGCGGCGG TACGGCTTGT GGGAAAATTT TTTTTTTTTT CTCTCCTTGC       960
     CAATTCGCGA GTGCAAAAGA TTGTGTATAA TAAACCAATA ATTAACCATT GCAGCAGTTT      1020
     ACCTGCGGCA GTACGAGTAA TATGAGCGCC CAGAGTGATA AGGTGGTGTG TGGCAGCTTG      1080
     TTGGATACGT TAAGTGGTGT GGAATGCACC CAAAAAAAAC CGCCCAACAA GTTGTGTGGC      1140
     GGCCGTACCT TAGTAGGCAA CCAGCCAAAA GGGATACTAC GGAACCACCG TGCCCAGTGC      1200
     CGAAATAAAT TAGAGGTCAT CAATAAAAAA CTGTAACAGC ACGCACGCAA GGAAAAAATA      1260
     TTGCAAAATG GAATAGCGCA CAAAAATTGT ATAAACACAT GCACAACACC ACAATTCAAA      1320
     GGAAAACAAA ATATTCATGC TGTAGGGGTA CAACCTAAAC GACGAAAACT AATAAAGAGC      1380
     ATACAAGGGT GAGTGAAATA TTTCATTAAA CTTTATTGCC ATATTTGCTA AATTTAGAGA      1440
     AATAAAGAAA AAGCAAAGAA GAACAGATAT TCTTTTTTAT CGGGTTAAAA CCGTTGTCTC      1500
     ACATTTCCGT AAAGTAATAA CGAATTCTGT TGCCTTGAAA GCTTCCTGCA TCTTTCCAAC      1560
     GCAAACTAAA AATCAAAATG GAAGAGACCC TGCGTGCTCT TAGCGAGTCC CTCAATGCCC      1620
     TGACCAACGT GGTGACAGGC ATTAAGGAAG ATATTAAGAA AAATAATGAT AGGTTGGCTA      1680
     TTTTAGAACA GGAGCGCGGG AACGCTGACC CTACGGTCGA CCAACCGCAA CCCCTGGTGC      1740
     GCGCACGCAC CGAGTATGAG CTGAGAGAGA TATCGGTCCT CCCTGACTGC GTCAAAGAAC      1800
     TGCAGGCGTT CGAAGGACGG CAGGAGGCTT ACCTGTCTTG GATAAACAGG GCACAGTCAA      1860
     TACTGACCGA ATATGACTTG ATTAAAACCA GACCCCTGTA TAGGGCAATT GTCTTGCATA      1920
     TTAGACAGAA AATAAGGGGA CACGCCGACA TGGCCTTGGC GGCCTATGGC GTCCAAGACG      1980
     ACGATTGGGA CGACATAAAA CGAGTCTTGG CGCTGCATTA CGCAGACAAA CGAGACTTAC      2040
     GTACGCTTGA GCATGAGCTT GGCGCTATGT GCCAAGGTTC TAGACCACTA GATAGGTTCT      2100
     ATATGGACGT TAATGGCCAT CTCTCGTTGA TCTTAAATAA CTTGAAGGCC AGAAACCACC      2160
     CTCGTGAAGT AGTCAACGCT TTGATAGAAA CCTATAGAGA CAAGGCTTTG GATGTTTTTA      2220
     TCCGAGGAGT GGGGAGAGAT TGTTCCAAAC ACTTACTTGT CCGCAGCCCG AAGAATCTAC      2280
     CAGAGGCTTA CTCTTTTTGT ATGGGATTGC AGAATGTAAT GTCAAGAAAT TTCACAGCTC      2340
     AGAACTATCA ACCGTCAGGT GCCCCAAGAT TCGCAGGCCC ATATCAACAT CAGGCCAGGC      2400
     CACCGTTCCG AACCCCTTTT TCTCCTGGTT CAGGCAGATT TTCGCAAAAC TCCTACAGAA      2460
     CTCAGGGTCC TAGACAGGCC ATAAAAATGG AATCCAATCG GTCGGGTCAA TCTTACCAAT      2520
     CAGGATACAG TGGTCGCCAG GAAGAAGGCT CCGGTATTAA GAGAATGTCC GAAGGAAACA      2580
     ACCCATTCCA AAAGGCACAA AGATTGTACC ACATGGAATT GGCACCACCC CCGCTAGCCC      2640
     CGGCGGCTAG TGGAGATAAC CAAGGACGTT CACACGAGGG TTACTATGAT GACGAGTCTC      2700
     AAGCTGTCGA GAGAAGCAAC AATTATCCTC CGCAGAAAAA CGTGGAAGGA GTTACAGATG      2760
     CTCCACATAA CCTTGAGACT GAGGGAGGGG CAAATTTTAT GACCAACGCC TCTCCAGTGT      2820
     ACCGTACTTA GAGTATGCTA CGGAGAGGGG AGAAAGGCTG AAGTTTTTGA TCGACACGGG      2880
     GGCGAACAAA AACTTTATTA GCCGAAGACT TGCAGCCGGG TGTACCACAG TCCGTAAACC      2940
     CTTCTCCGTA CTGTCCGCTG CGGGTAACAT CATGATAACG CACCGCCTAG TTGGTAAATT      3000
     CTTCAAACCA CTAGGGAACG ACTCGGATAT TACCTTTTTC GTACTACCGA ATTTACATTC      3060
     CTTTGATGGT ATCATTGGCG ACGATACTCT CAAAGACTTA AAAGCCATAG TGGATAGGAA      3120
     AAACAATTGT TTGATAATAA CCCCAGGAAT TAAAATCCCT CTTTTGGCGA GAGCTTCAAT      3180
     AAACGTTAAC CCGCTACTCG CCGCCGAACA CCCAGATGGT ACACAAGAAA TTTTGAATTC      3240
     CCTTCTCGGG GAATTTCCCC GCATCTTCGA GCCCCCCTTA TCTGGAATGT CCGTGGAGAC      3300
     GGCCGTCAAG GCTGAAATCC GGACAAACAC ACAAGACCCG ATCTATGCTA AAAGTTATCC      3360
     TTACCCAGTC AACATGCGCG GAGAAGTCGA ACGTCAAATC GATGAACTGC TGCAGGACGG      3420
     TATAATTCGA CCCTCTAATA GCCCTTACAA TTCCCCTATC TGGATAGTCC CGAAGAAACC      3480
     TAAACCAAAC GGAGAAAAAC AATATCGCAT GGTAGTCGAT TTCAAGCGGT TAAATACCGT      3540
     CACCATACCC GACACTTACC CCATCCCAGA TATAAACGCT ACGCTAGCCA GCCTTGGCAA      3600
     TGCCAAATAC TTTACCACCC TAGATTTGAC TTCTGGATTC CATCAAATCC ACATGAAGGA      3660
     AAGCGACATT CCAAAGACAG CTTTCTCTAC TCTAAATGGA AAGTACGAGT TCCTCCGTCT      3720
     ACCATTCGGT TTGAAGAATG CACCTGCAAT CTTCCAAAGA ATGATCGATG ATATTTTGCG      3780
     CGAGCATATT GGCAAGGTCT GCTACGTTTA TATTGACGAT ATCATCGTCT TCAGTGAAGA      3840
     TTATGACACA CACTGGAAAA ATCTCCGATT GGTATTAGCG AGTTTATCAA AAGCTAACCT      3900
     CCAAGTGAAC CTTGAGAAGT CGCATTTTTT AGACACGCAG GTAGAATTTT TAGGATATAT      3960
     CGTCACGGCC GATGGCATTA AGGCAGATCC GAAAAAGGTC AGAGCGATTA GCGAAATGCC      4020
     TCCTCCGACC TCTGTTAAGG AGTTAAAAAG ATTTCTAGGC ATGACCTCGT ACTACAGGAA      4080
     GTTCATTCAG GACTATGCGA AGGTAGCAAA GCCCCTTACA AACTTGACGC GTGGATTGTA      4140
     CGCTAATATA AAGTCTTCAC AATCAAGCAA AGTGCCAATT ACATTAGACG AGACGGCCCT      4200
     ACAGTCTTTT AATGATTTAA AATCAATTCT CTGTTCTTCT GAAATACTGG CGTTCCCATG      4260
     TTTCACTAAA CCTTTCCATC TAACCACGGA CGCTTCTAAC TGGGCCATCG GAGCTGTCCT      4320
     CTCACAGGAC GACCAGGGTA GAGATAGGCC GATAGCGTAC ATTTCCCGTT CATTAAATAA      4380
     GACGGAGGAA AACTACGCTA CTATCGAAAA GGAAATGCTC GCGATAATTT GGTCATTGGA      4440
     CAATCTTCGG GCTTACTTAT ATGGCGCTGG TACTATTAAA GTATATACTG ACCATCAACC      4500
     TCTAACGTTT GCCCTAGGCA ACAGAAATTT CAATGCGAAG CTAAAACGCT GGAAGGCTCG      4560
     TATAGAGGAA TACAACTGCG AACTCATCTA CAAGCCTGGG AAATCTAATG TGGTGGCTGA      4620
     CGCGCTTTCA CGCATTCCGC CTCAGCTTAA CCAGTTGAGC ACCGATTTAG ATGCTAATCC      4680
     CGAGGATGAC ATGCAGTCTT TGGCTACTGC CCATAGCGCT TTACATGACA GTTCACGATT      4740
     GATTCCCCAC GTTGAATCTC CAATCAACGT TTTCAAGAAT CAACTCATTT TTGACACAAC      4800
     CAGGTCAAAA TACTTATGCG AGCACCCGTT CCCAGGTTAT ACTCGCCATC TGATTCCTCT      4860
     CAAAGACGGA TCACTTGCCG ATTTAACCAA CTCGTTACAA TCGTGTCTAC GACCTGTAAT      4920
     AATTAACGGC GTCAAAATCC CGGAAGCACA TTTGCAACGC TTTCAGTCCA TCTGCTTAGC      4980
     GAATTTTCTT TTATACAAAA TTCGGATAAC GCAGCGCCTA GTGGCGGACG TGTCTGGCGC      5040
     AGAGGAAATT TGTGAAATAA TTGAAAAAGA ACACCGTAGA GCACATAGGG GCCCTACGGA      5100
     GATTCGTCTC CAACTTTTAG AAAAATATTA TTTCCCGCGA ATGTCCAGTA CGATCCGTCT      5160
     GCAAACTTCC TCATGTCAGT GTTGCAAACT CTACAAGTAC GAGAGACACC CTAACAAACC      5220
     AAACCTACAA CCTACGCCAA TTCCTAACTA CCCATGTGAA ATACTTCACA TCGACATTTT      5280
     TGCGCTCGAA AAAAGGTTAT ACCTAAGTTG TATTGACAAA TTTAGCAAGT TTGCCAAACT      5340
     TTTCCATCTG CAGTCAAAAG CATCTGTGCA TTTGCGAGAA ACTTTGGTGG AGGCCCTACA      5400
     TTACTTCACC GCCCCTAAGG TCTTGGTTTC GGATAACGAG CGAGGGTTGT TATGCCCCAC      5460
     AGTGCTCAAC TATCTTCGGT CTCTAGATAT CGATCTGTAT TATGCTCCAA CCCAGAAGAG      5520
     CGAAGTAAAT GGTCAAGTCG AGAGATTCCA CTCTACGTTC CTAGAAATTT ATCGTTGCCT      5580
     TAAAGATGAG CTCCCTACCT TCAAACCCGT TGAGCTGGTA CACATAGCAG TGGACCGCTA      5640
     CAACACTTCC GTTCACTCGG TAACGAATCG AAAACCAGCA GACGTTTTTT TCGACCGCTC      5700
     GTCAAGGGTA AACTATCAGG GTCTGACAGA TTTCCGGCGG CAGACTTTAG AGGACATCAA      5760
     GGGCTTAATT GAGTATAAGC AAATTAGAGG TAATATGGCT CGGAATAAAA ATAGGGACGA      5820
     GCCAAAGTCT TATGGGCCGG GAGATGAAGT TTTTGTTGCA AATAAGCAAA TAAAAACAAA      5880
     GGAAAAAGCG AGGTTCAGAT GCGAAAAGGT ACAGGAAGAC AACAAGATAA CAGTTAAAAC      5940
     CAGATCAGGA AAAATTTTCC ACAAATCTGA TCTAAGAAAT TGAGACGTGG CTTTCACATT      6000
     TAAAAAAGAA ACGCGAAAAA GAATAACGAA AGTAATAAAA GTACGTTGTG GCAGCTAATG      6060
     AAATATTCCA CCCATGCATA CCCTATATAA AAAAAACATT AATAAAAAAA AAAAAAAAAA      6120
     AAAAAAAAAA AAAAAAAAAT GAGTTAAGAA ATACAAAAAG AAATACAAAA AAAACTATAA      6180
     AAAAAATAAT ATAAAAAAAT ACAGATTATA AGAAATAAGA AATAAGAAAT ATAAAAAAAT      6240
     AAAAATATAA GTACACAAAA TGTACCGTAC CCCCACACAC TACGTAGTCT TAGAACAACT      6300
     TAGACGACCA GATATTTACG AATTGTCTTT TTGTAAGCGC GATTTCTGCA TGCGGCGCAA      6360
     ATCCCGCTCA CTGGACTGGC TGGGGTCGGC TTGGAAATGG GTAGCTGGAT CTCCAGATGC      6420
     TGCTGATTGG AACGCCGTCT TGGCCGCGCA AGCGACGGCT TCGAGGAACT GCAAAAACTG      6480
     GAGGAGGCTA GCTGTATCCC TCGGCTACTG AAGTAACCAA CGAGTGGTTA AGCAAGTCGA      6540
     CGATGGAATG CTCCTCCTGA CCAACTTCAA CGGAACTCTA AGAACGGCTG CAGAGAACTA      6600
     CGACCTGATC GGCTCCTTTA TCATCCAATT CGACAATGAG ACGATAATGG TCAACGGTCA      6660
     AAACTATTCC AGTTACTCGG TCAGTCATCT AATGGCGATG CCGGCCGTGT TGAGCCACAT      6720
     AACGGCCAGC AACTTTCAAC TTTCTCTGGA ATACGTCCAC GACGTGAGCA TGAAGAATTT      6780
     GGAAAAGATG TCCAACATGG CGAGTGAGCT ACTAGCCTCT CTTCTCACCG AGGCGGCACT      6840
     CGCAATCTGC ATATTCCTAG GCTTTTATTT CCTATGGAAG AAGCTGATGT CCACCAAAGG      6900
     CATGCCCGAT GTCCGCGAGA TTGCCGCAAA CTTAGAAGCA TTGGGCCAAA CCGAGCTGAA      6960
     CAAGGCTCAC TAATCTGCGG GACGCAGATC TTGAGGGGGG AGGAGTTAAG AACCCTCTTC      7020
     TTGCGCTCTT CGTCAGGACT CACCAGCGCT CGGCTCTCGT GTTTTCGGGC CCCGTCAGCA      7080
     GGCGACTCGG GGCCTGTCTA GTAACATGTT CGTGTAAGTT ACGAACCCTC TTCTTGCGAT      7140
     CTTCGTCAGG ACTCACCAGC GCTCGGCTCT CGTGTTTTCG GGCCCCGTCA GCAGGCGACT      7200
     CGGGGCCTGT CTAGGAACAT GTTTGTGTAT GTGTGCATTC GGAACAAGTG CCGTTGGTCG      7260
     CACTCAGGGT GAGGGGTCAA CGGGGGAAGC GGATATAAAA GCAGCGGGGC GGGAGAAGAG      7320
     GTCCCAGTCT CGAACGGACA CATAACGGAA CCGCTAGCAG ATCGCGAACT GAATCTTAAA      7380
     ATAAAGCTAA TCGTAAACTC GAACCCTCTT AACTATCTTG ACTATTATTT GGAGAACCAC      7440
     AGCATGTTGG TTGTCATATC AAGGTGAGGT ATGCGGCAGC GAGTGCCGAG AACCCTGATG      7500
     CAAGTGGAAC TTGCGTTAAC T                                                7521
//
ID   DM_ROO  standard; DNA; INV; 9092 BP.
XX
AC   AY180917;
XX
DR   FLYBASE; FBgn0000155; roo.
XX
SY   synonym: B104
XX
FT   source          AY180917:1..9092
FT   SO_feature      five_prime_LTR ; SO:0000425:1..429
FT   SO_feature      three_prime_LTR ; SO:0000426:8665..9092
FT   SO_feature      CDS ; SO:0000316:1275..8357
FT                   /protein_id="AAN87269.1"
FT                   /db_xref="FLYBASE:FBgn0043856; roo\ORF"
FT                   /translation="MMSEKTIQFLKKQSEIILEIRKLEVKPTLTDVEILKLNELQKCF
FT                   IANHSNLLKIGVVDHEYFNAKQYDLIMMVLEKIKNKNEKIKGESVENTFPKSNTVPKS
FT                   NPPPTLNLEMRGHPEKEGIAQNNALKVEQAFRNNVGQFRVYLEDTSKLIDSSPDFLKI
FT                   RKNKIEFLWHKIDNLIEQVNSRFESSLFEEEISELEFDKQNILTAINSRLSGTINKAE
FT                   MSTVVKAEELPTLPKIQIPTFFGDSKEWDLFNELFTELIHVREDLSPSLKFNYLKSAL
FT                   KGEARNVVTHLLLGSGENYEATWEFLTKRYENKRNIFSDHMNRLMDMPNLNLESNKQI
FT                   KTFIDTINESIYIIKLKAQLPEDVDAIFAHIILRKFNKESLNLYESHVKKTKEIQALS
FT                   DVMDFLEQRLNSISSFSQEVKPVKKMINNNKNKNYSDNCAYCKLPGHYLIQCHKFKIM
FT                   NPAERSDWVRKNGICLRCLRHPFGKKCISEQLCSTCRKPHHTLLHFAGHNPEKVNTCR
FT                   TTGQALLATALIQVKSRYGGFEQLRALIDSGSQSTIISEESAQILKLKKFRSHTEISG
FT                   VSSTGTCISKHKAVISIRNSPKNLEIEAIILPKLMKALPVNTINVDQKKWKNFKLADP
FT                   DFNKPGRIDLIIGADVYTHILQNGVIKIDGLLGQKTDFGWIVSGCKKSKGKETIVATT
FT                   IEIKELDRYWEVEEEEKDDIESEICENKFIKTTKKDSDGRYIVSIPFKEDVTLGDSKK
FT                   QAIARYMNLEKKLKRNEKLKVDYTKFMNEYMDLGHMIEVSDEGKYFLPHQAVIRDSSL
FT                   TTKLRVVFDASAKTTNNKSLNDIMWVGPRVQKDIFDIIIKWRKWEFVVSADIEKMYRQ
FT                   IKIDNNDQKYQYILWRNSPKEKIKTYKLTTVTYGTASAPYLATRVLVDIADKCKNQVI
FT                   SAIIRNDFYMDDLMTGADSVEEANKLITLIPHELQKVGFNLRKWISNNSKILTTVEDT
FT                   GDNKVLNIIENECVKTLGLKWEPQKDLFKFSVNCNDESKNINKRVVLSTLAKIFDPLG
FT                   WLAPVTVSGKLFIQKLWINKSEWDQELSIEDKNYWEKYKENLLLLENIRIPRWINSNS
FT                   SSVIQIHGFADASEKAYAAVVYAKVGPHVNIIASKSRVNPIKNRKTIPKLELCAAHLL
FT                   SELIQRLKGSIDNIMEIYAWSDSTITLAWINSGQSKIKFIKRRTDDIRKLKNTEWNHV
FT                   KSEDNPADLASRGVDSNQLINCDFWWKGPKWLADPKELWPRQQSVEEPVLINTVLNDK
FT                   IDDPIYELIERYSSIEKLIRIIAYINRFVQMKTRNKAYSSIISVKEIRIAETVVIKKQ
FT                   QEYQFRQEIKCLKIKKEIKTNNKILSLNPFLDKGGVLRVGGRLQNSNAEFNVKHPIIL
FT                   EKCHLTSLLIKNAHKETLHGGINLMRNYIQRKYWIFGLKNSLKKYLRECVTCARYKQN
FT                   TAQQIMGNLPKYRVTMTFPFLNTGIDYAGPYYVKCSKNRGQKTFKGYVAVFVCMATKA
FT                   IHLEMVSDLTSDAFLAALRRFIARRGKCSNIYSDNGTNFVGAARKLDQELFNAIQENI
FT                   TIAAQLEKDRIDWHFIPPAGPHFGGIWEAGVKSMKYHLKRIIGDTIFTYEEMSTLLCQ
FT                   IEACLNSRPLYTIVSEKDQQEVLTPGHFLIGRPPLEIVEPMEDEKIGNLDRWRLIQKI
FT                   KKDFWVKWKSEYLHTLQQRNKWKKEIPNIEEGQIVLLKDENCHPARWPLGKVEKVHKG
FT                   NDDKVRVAKVKMQEGYITRPITKICPLEGIKSVDKNEADQEPKRRTRATSGMSKIGII
FT                   MAMLLFVLSCQVSSALPKDIAPRYSIDKINKTSAIYLDPLGDVEIVSTSWNLVIYYKM
FT                   DPYFKMLTKGNALIQSMRKVCERLHSFEEQCSLVLDNMQSQLSELEENNKLFMMQSRS
FT                   RSKRAPFEFMGSLYHILFGIMDEDDREQLEENMKNLLDNQNNLDKLIQKQTSVVDSTS
FT                   NLLKRTTEDVNSNFRSMQIRIENMTEVLKENYYVYKESIKFFMITKQLHSLIEEGEKI
FT                   QAGIISLLIDINHGRLNTNILRPNQLKKEIAKIQQSLSENLVIPGKRSGTELKEVYTL
FT                   LTARGLFIDDKLIISAKVPLFSRHPSKLFRLIPVPIRNEDRIIMVHTTSEYLIYNFEI
FT                   DSYHIMTEATLNQCQKWQLNKRICKGSWPWNSANDNACEIQPLKPDKAANCIYKTVVD
FT                   SKSYWVELEKKSSWLFKVPANSKVRLQCTGSQIELFDLPQQGVLSIAPYCTARTDDKI
FT                   LVAHHNIQSESEELLSTPYIGEVSGVPKIIWDPLKLSILNHTEEFERLNNEIKFMKEN
FT                   HQKLKDLHFHHISGHAGLIIALILMIVLIIYFIRKCAVQQRMQAITFAGPLPVLXX
XX
CC   Sequence from P1 sequence DS00941:20448..29535 provided by
CC   Guochun Liao, Berkeley Drosophila Genome Project.
XX
SQ   Sequence 9092 BP;  3468 A; 1442 C; 1710 G; 2472 T; 0 other;
     TGTTCACACA TGAACACGAA TATATTTAAA GACTTACAAT TTTGGGCTCC GTTCATATCT        60
     TATGTAAATG AATCGAGAGC GATAAATTAT ATTTAGGATT TTGTTATCTA AGGCGACATG       120
     GGTGCATTGC TCAAAAACAT GTAATTTAAG TGCACACTAC ATGAGTCAGT CACTTGAGAT       180
     CGTTCCCCGC CTCCTAAAAT AGTCCCTTAG TGGGAGACCA CAGATAAGGT CCTCGCCGCT       240
     CAAGATAGGC AGATGTGCCC GAGCGTGGGA CCTCGATAAG GCGGGGACTA TTTACGTAGG       300
     CCTCTGCGTA GGCCATTTAC TTTAAGATGC GATTCTCATG TCACCTATTT AAACCGAAGA       360
     TATTTCCAAA TAAAATCAGT TTTTTTACAA AAACTCAACG AGTAAAGTCT TCTTATTTGG       420
     GATTTTACAT TTGGTCAATC GAGCCTTTAA TCGACTCTGC AGTTTCCCCC TACCAAAGGT       480
     AAGGAACTCA GAGAAAGGCC AGCTCCTTTA AGCATCTTAC AGCTAAAGGT AGCAAAAATA       540
     AGTGACTCTT GTTTCCCCCT ACCAAAGGTA AGGAACAGAG TATAAATATA AAAAGCAAAA       600
     GATACAAAAG AATCTTTTAT GTTTTAAAAC AAGCACCTTA TAGTCTATAG CTAAAGGTTG       660
     CTTTGTGTAC CATTATAAAT TGTGGTAAGG CGTGCTTGAG GCCATACATC AGCAATTGTG       720
     AAATTAAAAA GTGCATAACA AAAGTGCCTT ATAAATGCTC TAATAGCATT AAATCAGCTC       780
     ATAAATAGAG TGCAGTGTAT ATGCCATAAG AGCATAAATT AAATAAAAAG TGCCTGAAAA       840
     CAGTGCCTTA TAAATGCTCT AATAGCATTA AATCAGCTCA TAAATAGAGT GCAGTGTATA       900
     TGCCAAAAGA GCATAAATGC CGAAATAAAT GGCTAAAAAA CAAAAAATCT GACTGGACTA       960
     CAAAAATAAT AAAACGTGCC AAAAAAAAAA AAAAAATCAT CTTTAAACAT CGACGGAGCC      1020
     TTAAAGAAGA GAAGGAAGTC AAATTCAAAG GAGCCTCTAC CAGCAGCAGA AGCAGCAACA      1080
     ACAGCAGCAG CAGAAGCAGC AACAGCAGTA GCAACAGCAG CAACAACAGC AGCAACAGCA      1140
     GCAGCAACAA CAACGACATC AGCTAAGTCA AAACAAGAAT TTTCTGTTTA TCCAAACACA      1200
     CATATATATA TAAATACATA TAAAATACAT ATACACGTAC TATATATATT AAGAAATTAC      1260
     AAAAAATTTT CAAAATGATG TCAGAAAAGA CTATTCAATT CCTTAAGAAG CAGTCCGAAA      1320
     TTATTTTGGA AATTAGAAAG TTGGAAGTAA AACCAACATT AACAGATGTA GAAATTCTAA      1380
     AATTAAATGA GCTTCAAAAA TGTTTCATTG CTAATCATAG CAATTTGTTA AAGATCGGCG      1440
     TTGTCGATCA TGAATATTTT AACGCGAAGC AGTATGATTT AATAATGATG GTGTTAGAAA      1500
     AAATTAAAAA TAAAAATGAA AAAATTAAGG GCGAGTCGGT AGAAAACACT TTCCCTAAAT      1560
     CAAACACTGT CCCTAAATCA AACCCTCCCC CTACATTAAA CCTTGAAATG CGTGGTCACC      1620
     CTGAAAAAGA GGGTATAGCA CAAAACAACG CTTTAAAAGT AGAGCAGGCA TTTCGTAATA      1680
     ATGTTGGCCA ATTTCGAGTA TATCTAGAAG ATACGTCTAA ACTAATAGAC AGTAGTCCAG      1740
     ATTTCCTTAA AATAAGGAAA AATAAAATTG AATTTTTATG GCATAAAATA GATAACCTGA      1800
     TTGAACAGGT GAATAGTCGT TTTGAGAGTT CGCTATTCGA AGAAGAAATT AGCGAACTTG      1860
     AATTTGACAA ACAAAATATT CTTACAGCCA TTAATAGTCG ACTCAGTGGC ACAATAAATA      1920
     AAGCTGAAAT GTCGACGGTT GTTAAGGCGG AGGAGTTACC AACCCTGCCT AAAATACAGA      1980
     TTCCCACCTT CTTTGGTGAT TCCAAAGAAT GGGATCTTTT TAATGAACTC TTTACAGAGC      2040
     TCATACATGT GAGAGAGGAT CTCAGTCCTT CTCTCAAATT TAATTATCTA AAGTCAGCAT      2100
     TAAAAGGAGA AGCCAGAAAT GTGGTTACTC ATTTACTGCT CGGCTCTGGA GAAAATTATG      2160
     AAGCCACTTG GGAGTTTTTG ACCAAGCGAT ATGAGAATAA AAGAAACATA TTCTCAGATC      2220
     ATATGAATAG GCTTATGGAT ATGCCAAATT TAAATTTAGA ATCCAATAAG CAAATAAAGA      2280
     CATTTATTGA CACGATTAAC GAGTCAATTT ATATTATAAA ATTAAAGGCA CAATTACCAG      2340
     AAGATGTGGA TGCAATTTTC GCTCACATAA TTCTTCGGAA ATTCAATAAA GAATCACTCA      2400
     ATTTATATGA AAGCCATGTT AAAAAGACAA AAGAAATACA GGCACTTTCT GATGTCATGG      2460
     ACTTTTTAGA GCAAAGGCTC AATTCTATAT CATCATTCTC ACAGGAAGTA AAACCTGTAA      2520
     AGAAAATGAT TAATAATAAC AAGAATAAAA ATTATAGTGA CAATTGTGCA TATTGCAAAC      2580
     TACCAGGGCA TTATTTAATT CAATGCCATA AATTTAAAAT AATGAATCCA GCAGAACGGT      2640
     CTGACTGGGT AAGAAAAAAT GGGATTTGCC TAAGATGTCT GAGGCATCCG TTTGGTAAAA      2700
     AATGTATAAG CGAGCAGCTT TGTTCGACTT GTCGTAAACC TCACCACACG TTACTTCACT      2760
     TTGCAGGTCA TAATCCAGAA AAAGTGAATA CGTGTAGAAC AACAGGTCAA GCCTTGTTGG      2820
     CCACGGCCTT GATTCAAGTA AAGTCGAGGT ATGGAGGCTT TGAACAATTA AGAGCATTGA      2880
     TTGATAGTGG CTCTCAAAGC ACAATTATTT CAGAAGAGTC TGCACAGATT CTAAAATTGA      2940
     AAAAATTTCG GTCTCATACT GAAATAAGTG GAGTATCTTC CACAGGAACG TGCATCTCCA      3000
     AGCACAAAGC GGTTATTTCG ATAAGAAATT CTCCGAAAAA TTTAGAAATT GAAGCAATTA      3060
     TTCTCCCAAA ACTTATGAAG GCACTTCCAG TCAACACGAT TAATGTTGAT CAGAAAAAAT      3120
     GGAAGAACTT TAAATTAGCC GACCCCGATT TTAATAAACC GGGTCGCATT GATTTAATCA      3180
     TTGGAGCAGA CGTATATACT CACATTCTGC AAAATGGAGT TATAAAAATA GACGGTCTCC      3240
     TTGGGCAAAA AACTGATTTC GGGTGGATAG TTTCTGGATG TAAAAAATCC AAAGGAAAAG      3300
     AAACCATTGT AGCCACAACA ATAGAAATAA AAGAGTTAGA TCGCTACTGG GAAGTGGAAG      3360
     AAGAAGAAAA AGATGATATC GAGTCTGAAA TCTGTGAAAA TAAATTTATC AAAACGACAA      3420
     AAAAAGATTC AGATGGGCGA TACATTGTGT CAATTCCATT CAAGGAGGAT GTCACCTTAG      3480
     GAGATTCAAA GAAACAAGCG ATAGCTCGTT ACATGAATCT GGAGAAAAAA CTAAAAAGAA      3540
     ATGAAAAACT TAAGGTTGAC TACACTAAAT TCATGAATGA ATACATGGAT TTAGGACACA      3600
     TGATTGAAGT GAGTGATGAA GGCAAATATT TTTTACCGCA CCAGGCAGTG ATTAGAGATT      3660
     CAAGCCTTAC GACCAAATTG AGAGTAGTTT TTGATGCTTC AGCAAAAACT ACGAATAACA      3720
     AAAGTTTGAA CGACATAATG TGGGTTGGGC CACGAGTTCA AAAAGATATT TTTGACATTA      3780
     TTATTAAATG GAGAAAATGG GAATTTGTTG TTTCGGCAGA CATTGAAAAG ATGTACCGAC      3840
     AAATTAAAAT AGATAATAAT GATCAAAAAT ATCAATATAT TTTATGGAGA AATTCTCCAA      3900
     AAGAAAAAAT TAAAACATAT AAATTAACCA CAGTCACTTA CGGAACTGCA TCTGCACCAT      3960
     ATTTGGCTAC CAGGGTTCTG GTAGATATTG CAGATAAATG TAAAAACCAA GTTATTAGTG      4020
     CAATAATTAG GAATGATTTC TATATGGATG ACCTAATGAC TGGAGCTGAT TCGGTAGAAG      4080
     AAGCTAATAA ATTAATAACA TTAATTCCCC ATGAATTGCA GAAAGTTGGA TTCAACTTAA      4140
     GGAAATGGAT TTCCAACAAT TCCAAAATAT TAACCACTGT GGAGGACACA GGGGACAATA      4200
     AGGTTCTCAA TATTATCGAA AATGAATGTG TTAAAACTTT AGGACTAAAA TGGGAACCTC      4260
     AAAAGGATTT ATTTAAGTTC AGCGTAAATT GTAATGATGA ATCAAAAAAT ATAAATAAGC      4320
     GCGTTGTGTT ATCAACGCTA GCAAAAATAT TTGATCCGTT AGGATGGTTG GCACCAGTCA      4380
     CGGTTTCAGG AAAACTTTTT ATTCAAAAAC TTTGGATAAA TAAAAGTGAA TGGGATCAGG      4440
     AATTATCCAT AGAAGATAAA AATTATTGGG AAAAATATAA AGAAAATTTA TTATTGTTAG      4500
     AGAATATTCG AATCCCAAGG TGGATTAATT CAAACAGTTC TTCAGTCATT CAGATTCACG      4560
     GATTTGCGGA CGCCTCCGAA AAAGCATATG CTGCAGTAGT CTATGCTAAA GTAGGACCTC      4620
     ATGTTAATAT AATAGCTAGC AAAAGTAGAG TCAACCCTAT AAAAAATAGG AAGACAATTC      4680
     CCAAACTCGA GCTGTGTGCA GCTCACCTGC TTAGTGAATT AATCCAAAGA CTAAAAGGAT      4740
     CAATTGACAA TATAATGGAG ATCTATGCTT GGAGTGATTC CACGATTACC TTAGCATGGA      4800
     TTAACAGTGG TCAAAGTAAG ATCAAATTTA TAAAAAGAAG AACGGATGAC ATTCGGAAAT      4860
     TAAAAAATAC TGAATGGAAT CATGTTAAGT CAGAGGATAA TCCAGCAGAT TTAGCATCCA      4920
     GGGGAGTGGA TTCTAACCAG TTGATCAACT GTGATTTTTG GTGGAAAGGT CCGAAATGGC      4980
     TAGCAGACCC AAAAGAACTT TGGCCTCGGC AGCAGTCTGT AGAAGAACCT GTCTTAATAA      5040
     ATACGGTATT AAATGACAAA ATAGATGATC CTATTTACGA ATTAATAGAA AGGTATTCCA      5100
     GTATAGAAAA ACTTATACGT ATAATAGCAT ACATAAATAG ATTCGTGCAG ATGAAAACAA      5160
     GAAATAAAGC CTATTCATCA ATTATTTCAG TAAAGGAGAT AAGAATAGCG GAAACAGTTG      5220
     TTATTAAGAA ACAACAAGAA TACCAGTTTA GGCAAGAGAT AAAGTGCCTT AAAATCAAAA      5280
     AGGAAATCAA GACAAATAAT AAAATATTGT CATTGAATCC ATTTTTGGAC AAGGGTGGGG      5340
     TTCTAAGAGT TGGAGGAAGA TTGCAAAATT CCAATGCAGA ATTTAATGTT AAACATCCAA      5400
     TCATTTTAGA AAAATGCCAC CTAACAAGCT TATTAATAAA AAATGCTCAT AAGGAAACAT      5460
     TGCATGGAGG GATAAACCTA ATGCGAAACT ATATCCAAAG AAAGTATTGG ATTTTCGGGT      5520
     TGAAAAATTC GTTGAAAAAG TATTTAAGAG AATGTGTAAC GTGTGCAAGG TATAAACAAA      5580
     ATACAGCTCA GCAAATAATG GGTAACTTGC CAAAATATAG AGTGACGATG ACATTCCCGT      5640
     TTCTTAATAC TGGAATAGAT TACGCAGGTC CTTATTATGT TAAATGTTCA AAAAATCGTG      5700
     GCCAAAAAAC ATTTAAAGGA TACGTTGCTG TATTCGTTTG CATGGCCACC AAAGCCATAC      5760
     ACTTAGAAAT GGTAAGCGAT CTAACTTCAG ACGCATTTTT AGCAGCACTC AGAAGATTTA      5820
     TTGCTAGACG GGGAAAATGT TCCAATATCT ATTCAGACAA CGGAACAAAT TTTGTAGGAG      5880
     CTGCAAGAAA ATTAGATCAA GAGTTATTTA ATGCAATACA AGAAAATATA ACGATTGCAG      5940
     CGCAACTTGA AAAGGACAGG ATTGATTGGC ATTTTATTCC CCCGGCAGGA CCTCACTTCG      6000
     GAGGTATTTG GGAAGCTGGA GTTAAGTCAA TGAAATACCA TTTAAAGCGT ATAATCGGCG      6060
     ACACTATTTT TACTTATGAA GAAATGTCAA CTCTTTTATG TCAAATAGAA GCATGCTTAA      6120
     ATTCAAGGCC ATTATACACT ATAGTTAGTG AGAAGGACCA ACAAGAAGTT TTAACACCAG      6180
     GTCATTTTTT AATTGGAAGA CCACCTTTAG AAATAGTCGA ACCAATGGAA GATGAAAAAA      6240
     TCGGAAATTT GGATAGGTGG AGACTTATCC AAAAAATAAA GAAAGATTTC TGGGTTAAGT      6300
     GGAAAAGTGA ATATTTGCAT ACGCTCCAGC AAAGGAATAA ATGGAAAAAG GAAATTCCTA      6360
     ATATAGAAGA AGGGCAAATA GTTTTATTAA AGGATGAGAA TTGTCATCCT GCAAGATGGC      6420
     CTTTAGGAAA GGTGGAAAAG GTGCATAAGG GGAATGATGA TAAGGTCCGA GTGGCTAAAG      6480
     TAAAGATGCA GGAAGGATAT ATCACTAGAC CCATTACTAA AATTTGTCCC TTGGAAGGAA      6540
     TAAAGTCTGT TGACAAAAAT GAGGCTGACC AAGAGCCAAA AAGACGAACT AGAGCGACAT      6600
     CGGGAATGTC CAAGATCGGA ATCATTATGG CAATGTTGTT GTTTGTGTTA AGTTGTCAAG      6660
     TTTCTAGCGC ATTACCTAAA GATATAGCAC CAAGATATTC TATAGACAAA ATAAATAAAA      6720
     CCTCAGCAAT ATATCTAGAC CCGCTAGGAG ATGTTGAGAT TGTGAGTACT TCTTGGAATT      6780
     TGGTTATCTA TTATAAAATG GATCCATATT TTAAAATGTT AACAAAGGGT AATGCGCTTA      6840
     TACAAAGTAT GAGGAAAGTT TGCGAAAGAC TTCATAGCTT TGAAGAGCAA TGTAGTCTAG      6900
     TCTTAGATAA TATGCAAAGT CAGTTATCGG AACTTGAAGA AAACAATAAA TTGTTTATGA      6960
     TGCAGTCTAG ATCTAGAAGC AAGCGTGCTC CTTTCGAATT TATGGGTTCC TTGTATCATA      7020
     TTTTATTTGG TATAATGGAT GAAGATGATA GAGAGCAATT AGAAGAAAAT ATGAAGAATT      7080
     TGTTAGATAA CCAGAACAAC CTTGATAAAC TAATTCAAAA ACAAACATCT GTGGTTGATT      7140
     CAACTTCTAA TCTATTAAAG AGAACAACAG AAGATGTTAA CTCCAATTTT AGAAGTATGC      7200
     AAATAAGAAT TGAGAACATG ACAGAAGTTC TTAAAGAAAA TTATTATGTT TATAAGGAAT      7260
     CAATAAAATT CTTTATGATT ACGAAACAGC TACACTCATT GATTGAAGAA GGCGAAAAAA      7320
     TTCAAGCAGG CATTATAAGC CTGTTGATTG ATATTAATCA CGGTAGGCTA AATACAAATA      7380
     TTCTCAGGCC AAATCAGCTT AAAAAAGAAA TTGCCAAAAT TCAGCAGAGT CTTTCAGAGA      7440
     ACCTAGTAAT TCCAGGAAAA CGGTCAGGTA CGGAACTTAA GGAGGTGTAT ACACTGTTAA      7500
     CAGCCAGGGG TTTATTCATC GACGATAAAT TGATCATTAG TGCAAAAGTG CCTCTGTTTA      7560
     GCAGGCATCC ATCCAAATTG TTCAGGCTTA TTCCGGTGCC AATTCGAAAT GAAGATCGGA      7620
     TAATAATGGT GCATACAACG TCCGAATATT TAATTTATAA TTTTGAGATA GATTCCTATC      7680
     ACATAATGAC GGAAGCCACA TTAAATCAAT GTCAGAAATG GCAACTAAAT AAGAGAATAT      7740
     GCAAAGGAAG TTGGCCCTGG AATTCAGCGA ATGATAATGC ATGTGAGATT CAGCCTCTAA      7800
     AGCCAGATAA AGCGGCGAAC TGCATCTATA AAACAGTAGT CGACTCTAAA AGTTACTGGG      7860
     TAGAGTTAGA AAAGAAAAGT AGTTGGTTGT TTAAGGTTCC TGCGAATTCA AAAGTCCGTC      7920
     TGCAATGTAC TGGCTCTCAA ATTGAATTGT TTGATTTGCC TCAGCAAGGA GTTTTAAGCA      7980
     TTGCGCCATA TTGTACGGCA AGAACCGACG ATAAAATTCT AGTTGCCCAC CATAACATTC      8040
     AGTCCGAAAG TGAAGAATTA TTATCAACAC CTTATATAGG AGAAGTTAGT GGAGTGCCGA      8100
     AGATTATTTG GGATCCGCTG AAACTATCAA TATTAAATCA TACTGAGGAA TTTGAACGAT      8160
     TGAATAATGA AATTAAATTT ATGAAAGAGA ACCATCAAAA ATTGAAAGAT TTACATTTCC      8220
     ATCATATTTC CGGACATGCT GGATTAATTA TTGCTTTAAT ACTAATGATA GTATTAATAA      8280
     TATATTTCAT ACGGAAATGT GCTGTGCAAC AAAGAATGCA AGCAATAACC TTTGCAGGTC      8340
     CGTTGCCAGT ACTATAAATA TCAATAGTAA ATAAACAATA AAATAATATA ACAAATAAAA      8400
     ATATACAGTC CACTAATAGA AAATGTACTT CTACATAGAA AAAGCAAAAT GTTTAAAATA      8460
     AGTTAATTAA GTACAAATTG TTGAATTAAA AATAATATAA ACCATAATTG TAATCCAATA      8520
     AAATTAAAAG CCAGAAAAAC TAGGCCCATT GAAATCTTAG TTGCAAAATA AATGAACATA      8580
     TATCAAATAA ATACAGTCCA CTACTGTTAT AAATGCAACT AATATACTAA TGTACATCTC      8640
     AGCTTTGCTG GCCCTTTGGC AGAATGTTCA CACATGAACA CGAATATATT TAAAGACTTA      8700
     CAATTTTGGG CTCCGTTCAT ATCTTATGTA AATGAATCGA GAGCGATAAA TTATATTTAG      8760
     GATTTTGTTA TCTAAGGCGA CATGGGTGCA TTGCTCAAAA ACATGTAATT TAAGTGCACA      8820
     CTACATGAGT CAGTCACTTG AGATCGTTCC CCGCCTCCTA AAATAGTCCC TTAGTGGGAG      8880
     ACCACAGATA AGGTCCTCGC CGCTCAAGAT AGGCAGATGT GCCCGAGCGT GGGACCTCGA      8940
     TAAGGCGGGG ACTATTTACG TAGGCCTCTG CGTAGGCCAT TTACTTTAAG ATGCGATTCT      9000
     CATGTCACCT ATTTAAACCG AAGATATTTC CAAATAAAAT CAGTTTCTTA CAAAAACTCA      9060
     ACGAGTAAAG TCTTCTCATT TGGGATTTTA CA                                    9092
//
ID   BLOOD    standard; DNA; INV; 7410 BP.
XX
AC   AY180916;
XX
DR   FLYBASE; FBgn0000199; blood.
XX
FT   source          AY180916:1..7410
FT   SO_feature      five_prime_LTR ; SO:0000425:1..398
FT   SO_feature      three_prime_LTR ; SO:0000426:7011..7410
FT   SO_feature      CDS ; SO:0000316:966..1271
FT                   /protein_id="AAN87266.1"
FT                   /db_xref="FLYBASE:FBgn0045863; blood\sORF"
FT                   /translation="MSTKQTFEHPAPVEQRDLPSIKEVIEVDPSAGPKPLTIQEYKAR
FT                   TAAREQPPKKKRGGRRIKLLSARRLNIELLKTATNEEDRQRYKERLAAINQQLRGAK"
FT   SO_feature      CDS ; SO:0000316:1863..3116
FT                   /protein_id="AAN87267.1"
FT                   /db_xref="FLYBASE:FBgn0045865; blood\ORF1"
FT                   /translation="MEWLNLTISINNIRDAFDKSYKCINKTALIKTQTLIFHIKVLIT
FT                   QYNTLQNLIVTNKSKLTEEHKVQCFKVLSSFGKRLHNTSVRHSIIIEVPTELTKIAEF
FT                   DESQLRDLDESQPLEDLDIESDIESIEELKFNTVQPNTRNMANALEAQRAYVKQVSAT
FT                   VPDFDGKKLHLNRFVTALKLTDLTKGDQETLAVEVIKTKIIGPLNYKVEHATTIQAII
FT                   TILQANVKGESPDVIKAKLINAQQRGKTASQYVTEIDSMRKQLEAAYIDGGLDADNAD
FT                   KFATKESISAMTKNCANEALKMILTAGTFSTFNDAMEKYLHCSTEITGNSNTVLFYNG
FT                   NNRRGNYNAYYRGRGRNNYNHNYNQNYNQGYNNNNRGRGGYRGHGNNRDGGNRRGNQS
FT                   QNNNNNRNVRNVQSENSQTPLSDQQ"
FT   SO_feature      CDS ; SO:0000316:3749..6733
FT                   /protein_id="AAN87268.1"
FT                   /db_xref="FLYBASE:FBgn0045864; blood\ORF2"
FT                   /translation="MKDYDIFTTPVEKENRTEEILKQLRFPKQFNNELTKLCTEFSDI
FT                   FGLETEPISANNFYKQKLRLGEKTPVYIKNYRMADSQKPEIARQVKKLIDDGIVEPSM
FT                   SEYNSPLLLVPKKPLPNSTEKRWRLAVDYRQINKKLLSDKFPLPRIEDILDQLGRAKY
FT                   FSCLDLMSGFHQIELEKRYRDITSFSTANGSYRFTRLPYGLKVAPNSFQRRMTLAFSG
FT                   LEPSQAFLYMDDLVVIGCSEKHMLKNLTNVFELCRRHNLKLHPGKCSFFMKEVTYLGH
FT                   KCTDKGILPDDTKYEVIEKYPIPTDADSARRFVAFCNYYRRFIKNFSDHSRHLTRLCK
FT                   KNVQFEWTAECNDAFEYLKTELMKPTLLQYPDFGKEFCITTDASKQACGAVLTQDHNG
FT                   QQLPVAYASRMFTQGESNKSTTEQELTAIHWAINHFRPYIYGKHFMVKSDHRPLSYLF
FT                   SMKNPSSKLTRMRLDLEEYDFTVEYLKGKDNHIADALSRITIKDLKTINREILKVTTR
FT                   SKAKQENSCKDEAIVKIQEEKEQTIEKPKVYEVVNNNDTKKYVLIKIDKHKCLLKRGK
FT                   TIVSRFDVDDLYSNETFDLNQFFQRLISKAGMHKITKMRISPSEQMFQFVSLNEFKIK
FT                   GNRVLEKVELAILQKVIIIDKNDEAQIKEILTKFHDDPIEGGHTGISRTQSKIKRFYY
FT                   WPQMTKTISKYVKTCLKCQQAKITTHTKTPLTLMPTPATAFDTVLIDTIGPLPKSEDG
FT                   NEYAVTIICDLTKFLVTIPTPNKSAKTVAKAIFELFVLKYGPMKTFITDQGTEYKNSL
FT                   MNELCKYMHIENLTSSAHHHQTLGTIERSHRTFNEYIRSYISVNKSDWDIWLPYFTYC
FT                   FNTTPSIVHDYCPYELVFGRLPRQFKDFSKINKIDPIYNLDDYSKELKCRLELSYNRA
FT                   RRMLEKAKADRKLRYDRNTNNFELKIGDKVLLRKETGHKLDKRYEGPYDVVDIGINDN
FT                   ITIKTGSKKQQIVHKDRLKKHK"
XX
CC   Sequence from P1 (complement)DS03023:69372..76782 provided by Guochon Liao,
CC   Berkeley Drosophila Genome Project.
XX
SQ   Sequence 7410 BP;  2840 A; 1403 C; 1328 G; 1839 T; 0 other;
     TGTAGTATGT GCATATATCG AGGGTACACT GTACCTATAA GTACACAGCA ACACTTAGTT        60
     GCATTGCATA AATAAATGTC TCAAGTGAGC GTGATATAAG ATCACCCATT TATGCTTTAA       120
     GCTAAGTCAG CATCCCCACG CTGGCCGCTG GCCATATATG CGCATAAGCT CTCTCTCTCT       180
     CTCTCTTATA CATATATATA TACGCTGCTC TTCTGCCGCT GTCGACGGCG GCGCAGTCGC       240
     AGTATTTAGG TAAGATTAGA CACTCTGTAG AGGTTAAGCG GGCAGAACCG TTTCTGCTAC       300
     TCGAAGAGAT AAGAAGAAAT AAAAAGGTGC CTGACGGCTG CACCCAACTG CAAGGAAAAC       360
     ACGTGTTCTC AATTGGTGGC ATATATTGGT TTATTACATG GCGACCGTGA GGCAGGAGCC       420
     TGCGATCTGA GGACTACTGA GGAAATGCTG CTAATATTGC CGATTTGATT TGGGAATTCT       480
     AAACAGCGAC AACAGGTGTG AGAAGCAGGC CGCCCCTTAC ACCAGTGCGG GAGACCTAGA       540
     GACGGGACAC TGATGAAAAA AAAAGAAACA AAAATACTGA GTGAGTAGAG TGTGGTAATG       600
     GGCAAACGCG GATGTCAGGA AATCAAAAAT AAAGGTATAG CACATATTAA GTGGCTATGA       660
     TATACAAATA AAACACCGCC CCCATGGGCA ACGGCACAGA AATTAACTGC CGAATTAGAC       720
     TTTCTGAAAG AAAACCTCCA GCAAAGAAAG CCGAATACCA CAACTCACTC AGCAAAAATA       780
     GAAATAATCA ATGAAGAAAT AACTGAAAAT TCAACATCAC CCAAGCCGAA AAGACCCGAC       840
     GTCTGCATGA AAGACTGCCC TCGACCATTG TAAGCCGCAA CAGCAATTAG CACGGCATCC       900
     TGCGAGGGTA GGATTAGGAT AAAGGATAAA GGATTCCACC GGCGCGCCGC ACATGACAAC       960
     AGCGAATGTC TACCAAGCAG ACGTTCGAAC ACCCTGCTCC TGTCGAGCAA AGGGATCTGC      1020
     CAAGTATCAA AGAGGTAATA GAGGTAGATC CGTCCGCGGG ACCAAAGCCC TTGACCATAC      1080
     AAGAGTACAA GGCACGGACT GCAGCGAGGG AGCAGCCACC TAAAAAGAAG AGGGGTGGCC      1140
     GCCGGATTAA GTTGCTCAGC GCCCGGAGGC TCAACATCGA ACTACTGAAG ACGGCAACTA      1200
     ATGAGGAAGA CCGGCAGCGC TACAAAGAGC GCCTTGCAGC CATCAATCAA CAACTTCGTG      1260
     GTGCGAAGTA AAGCGGCGGG CTGCGTTATA CGCCATAGCC TCAACCGCCC AAATATTATA      1320
     TTAATGTTGT CGATGCGGTT TCCGCTGCAA CAAAATTACT AACTTATCAG GGACCCATTT      1380
     CATAACTAAC ACATTATACT CAGTCCTAAA CTTAAAATAA GTAATAATAT TGTAAAATTG      1440
     CAAATTGCAA CCGATGTAAA CTGAGTATAA TGAATTCATC TATCAAGTAA AAATATGTTT      1500
     AACAACAGTT TAGACCTATT AAAATTTCGA GCTATATTTA TATCTGATCG AGATAACAAT      1560
     AATTGACCAA TTCTCAAAGT TAAAATTCTA TTTGTACTTT TGATATACAA ATAAAGACTA      1620
     ATTTTCCCCA TATCAAAATG GGACATAAGT CGTGGATACA ACCCCACAGT TAAATTCAAT      1680
     GTACTTACTA TTTTTGATTT TAGTTATCCT ATCAGCCTTT TTACCTTGGC CTTAAAACTT      1740
     TATCAGTTTC ACACAAGATC GTTGAAAAGA CTTACATGAG TCGAGCCAAT GATTTAGACA      1800
     AAATCTAATA GAAACTACAC CAAAAAGGTA CAAGGTCGAT TACATCGCTA AAAGGTACAT      1860
     ACATGGAATG GCTAAACTTA ACCATATCCA TAAACAATAT TAGAGATGCT TTTGATAAAT      1920
     CCTATAAATG TATTAATAAA ACCGCGCTGA TCAAAACTCA GACGCTTATT TTTCACATAA      1980
     AGGTATTGAT AACACAATAC AACACATTAC AAAACCTAAT AGTAACAAAC AAAAGCAAAC      2040
     TCACTGAAGA ACATAAAGTC CAATGCTTCA AAGTTCTCAG TTCATTTGGT AAAAGACTAC      2100
     ATAATACCAG CGTTAGACAC AGTATTATAA TAGAAGTCCC AACAGAACTA ACCAAAATAG      2160
     CAGAATTCGA CGAAAGCCAG TTAAGAGACT TGGACGAGTC GCAGCCGTTA GAAGATTTAG      2220
     ATATCGAAAG CGATATCGAA TCAATAGAAG AATTAAAATT TAATACCGTA CAACCAAATA      2280
     CAAGAAACAT GGCCAACGCA TTAGAAGCTC AGAGAGCATA CGTTAAACAG GTATCTGCCA      2340
     CAGTACCTGA TTTCGATGGT AAGAAACTCC ATTTAAACAG GTTTGTGACA GCACTTAAGT      2400
     TGACGGATCT AACTAAAGGA GATCAAGAAA CTTTAGCAGT AGAGGTCATA AAGACCAAAA      2460
     TTATTGGCCC ATTAAACTAT AAAGTAGAAC ATGCGACAAC GATACAGGCA ATAATTACCA      2520
     TATTGCAGGC AAACGTAAAA GGCGAATCGC CTGACGTTAT AAAGGCCAAA TTAATAAATG      2580
     CCCAACAAAG AGGCAAGACC GCGTCTCAGT ATGTTACAGA AATAGACAGT ATGCGTAAGC      2640
     AGCTCGAGGC AGCTTACATA GACGGCGGAT TAGACGCCGA TAATGCTGAC AAATTCGCGA      2700
     CTAAAGAGTC GATATCAGCA ATGACCAAAA ACTGTGCCAA CGAGGCACTT AAAATGATCT      2760
     TAACTGCAGG TACATTTAGT ACATTCAACG ACGCAATGGA AAAATACCTA CATTGCAGTA      2820
     CAGAAATAAC CGGCAATTCA AATACAGTCT TATTCTATAA TGGGAATAAT AGACGTGGTA      2880
     ATTATAATGC CTACTATCGT GGTAGAGGCA GAAATAATTA TAACCATAAT TATAACCAGA      2940
     ATTATAACCA AGGTTATAAT AATAACAACA GAGGTCGCGG AGGCTACCGC GGCCACGGTA      3000
     ATAACAGAGA CGGAGGTAAC CGAAGGGGTA ACCAAAGTCA GAATAATAAT AACAACCGAA      3060
     ATGTGCGTAA CGTACAATCG GAAAACAGCC AGACCCCCTT AAGCGATCAA CAGTAAAAGT      3120
     GTTTAAAGTA AACCTAAATC TGAGTATTTT CATTAAGACA AAAAACCATG AAACAAACAC      3180
     AGTTCTTACA TTACTAATAG ACACAGGTGC AGAAATTTCA TTGCTAAAAG CCAAAGCAAA      3240
     GGAATATAAT AATATAAATT TCAGTAATAT ATCAAATATT ACAGGTATTG GGCAAGGAAC      3300
     CATACAGTCT ATAGGTACAG TAGATCTTGA CATACGCATT CAGGATGTTC TAGTGCCACA      3360
     TGAATTTCAT GTAGTACCTG AGAATTTTCC GATACCATGC GATGGCATAA TCGGAATAGA      3420
     TTTTATCAAG AAATACAATT GCGTATTAGA GTTTCAAAAT AACAAAGACT GGTTCACAAT      3480
     AAGACCCAAT AACTTCAGTA GACAGATTAG TGTACCAATT ACACATAACT TAGACTCCAA      3540
     CACACTCTTA TTGCCAGCTA GATGCGAAGT AATCAGACAA GTCAAATTAC TCACTAACGA      3600
     AAAAACGGTG GTAGTACCAA ATCAGGAGCT GCAACCAGGT ATAATAGTAG CAAGCACCAT      3660
     TGCCGATAGC AAAAACGCAT TGATTCGCAT TATAAATACA AATAATAAAG ACGCCATAAT      3720
     AGATAGCGCG AAGATCAAAT GCGAATCAAT GAAAGACTAT GACATTTTTA CAACACCAGT      3780
     AGAAAAGGAA AATAGAACTG AAGAAATTTT AAAACAATTA AGATTCCCTA AACAATTCAA      3840
     TAATGAACTA ACTAAGTTAT GCACCGAGTT TAGCGATATT TTTGGTCTAG AAACAGAACC      3900
     AATATCGGCT AACAATTTCT ACAAACAAAA ACTCAGATTA GGGGAAAAAA CACCGGTCTA      3960
     TATAAAAAAC TATCGCATGG CAGATAGCCA AAAACCAGAA ATCGCCAGAC AGGTAAAAAA      4020
     ATTAATAGAT GATGGAATAG TTGAACCATC AATGTCTGAA TATAATAGTC CATTACTTTT      4080
     GGTTCCAAAG AAACCACTTC CGAATTCCAC GGAAAAAAGA TGGCGATTAG CAGTTGACTA      4140
     TCGTCAAATA AATAAGAAAC TATTATCAGA CAAATTTCCA CTTCCAAGAA TAGAAGATAT      4200
     TCTTGATCAA TTAGGAAGAG CAAAGTATTT TTCATGTCTC GACCTAATGT CTGGATTCCA      4260
     CCAGATAGAA CTAGAAAAAA GGTATAGAGA TATAACGTCA TTTTCAACAG CCAATGGCTC      4320
     ATATCGCTTC ACGCGATTAC CATACGGACT GAAAGTAGCA CCAAACTCCT TCCAACGTAG      4380
     GATGACACTT GCATTTTCTG GTCTTGAACC ATCGCAAGCA TTTCTATATA TGGATGACTT      4440
     AGTAGTAATA GGTTGTTCAG AAAAACATAT GCTCAAAAAT TTGACTAACG TATTCGAGCT      4500
     ATGTAGACGA CATAATTTGA AACTACATCC AGGGAAATGT TCTTTCTTTA TGAAAGAAGT      4560
     AACATATTTG GGTCACAAAT GTACCGATAA AGGTATACTC CCAGATGACA CCAAATATGA      4620
     AGTTATAGAA AAATATCCTA TACCAACAGA TGCCGACAGT GCTAGGCGTT TCGTAGCCTT      4680
     CTGTAATTAT TACAGACGTT TCATTAAAAA TTTTTCTGAT CATTCACGCC ACTTAACGAG      4740
     GCTTTGTAAA AAGAATGTTC AATTCGAATG GACAGCAGAA TGCAATGATG CATTCGAATA      4800
     CCTTAAAACA GAATTAATGA AACCAACATT ACTACAGTAC CCAGATTTCG GTAAAGAATT      4860
     TTGCATAACA ACCGATGCTA GTAAACAGGC ATGCGGAGCG GTACTTACAC AAGATCACAA      4920
     TGGTCAACAA CTTCCAGTGG CATACGCTTC AAGAATGTTC ACTCAAGGTG AAAGTAATAA      4980
     GTCCACTACA GAACAAGAAT TAACGGCCAT TCATTGGGCC ATAAATCATT TTCGACCATA      5040
     CATATATGGC AAGCATTTCA TGGTAAAAAG CGATCATAGA CCATTGTCAT ACCTATTCTC      5100
     TATGAAAAAT CCAAGTTCAA AACTCACTCG TATGAGGCTG GATTTAGAAG AGTATGACTT      5160
     TACTGTAGAA TATCTTAAGG GGAAAGATAA CCATATTGCG GACGCCTTGT CTCGCATAAC      5220
     AATAAAAGAT CTGAAAACAA TCAACAGAGA AATATTAAAA GTTACCACCA GATCAAAAGC      5280
     TAAACAGGAA AATTCCTGTA AGGACGAAGC AATAGTCAAA ATACAAGAGG AAAAAGAGCA      5340
     AACAATAGAA AAGCCCAAAG TCTATGAAGT TGTCAATAAT AATGACACAA AGAAATATGT      5400
     TTTAATCAAA ATAGATAAAC ACAAGTGTTT ATTAAAACGA GGAAAAACAA TTGTTTCACG      5460
     CTTTGATGTT GATGACTTGT ATTCTAATGA AACATTTGAT CTAAATCAAT TCTTTCAAAG      5520
     GCTTATTTCA AAAGCCGGAA TGCATAAAAT AACAAAAATG CGAATATCAC CAAGCGAACA      5580
     GATGTTCCAA TTTGTATCAC TAAATGAATT TAAAATAAAG GGCAACCGAG TACTCGAAAA      5640
     AGTAGAACTA GCTATTCTAC AAAAGGTGAT AATTATAGAC AAAAATGACG AAGCTCAGAT      5700
     TAAAGAAATT TTGACAAAAT TCCATGATGA TCCTATAGAA GGAGGCCACA CTGGTATTTC      5760
     GCGAACCCAG TCAAAAATCA AAAGATTTTA TTATTGGCCC CAGATGACCA AGACAATCTC      5820
     AAAGTATGTA AAGACTTGTT TGAAATGTCA ACAAGCCAAA ATTACAACAC ATACGAAAAC      5880
     TCCATTAACA TTGATGCCAA CGCCAGCAAC AGCATTTGAT ACTGTTTTAA TTGATACCAT      5940
     TGGTCCACTA CCGAAATCGG AAGACGGAAA TGAGTATGCA GTTACAATCA TATGCGATCT      6000
     AACCAAGTTT TTAGTAACTA TTCCAACACC AAATAAAAGT GCTAAAACAG TTGCAAAGGC      6060
     TATATTTGAA TTATTTGTAC TGAAGTACGG TCCAATGAAG ACGTTCATTA CAGATCAAGG      6120
     TACGGAATAC AAAAATTCAC TTATGAATGA ATTATGCAAA TATATGCATA TAGAAAATCT      6180
     AACATCTAGC GCTCACCATC ATCAAACTTT AGGAACAATA GAAAGAAGCC ACCGAACTTT      6240
     TAATGAATAT ATACGTTCAT ACATATCGGT TAACAAAAGT GATTGGGACA TTTGGTTACC      6300
     ATATTTCACT TATTGCTTCA ATACAACACC CTCAATAGTC CATGACTATT GCCCATACGA      6360
     ACTAGTATTT GGCAGACTAC CCAGACAATT CAAAGATTTC AGTAAGATAA ACAAAATAGA      6420
     CCCAATATAC AACTTAGACG ACTACTCTAA AGAGCTTAAA TGCAGACTAG AATTGTCGTA      6480
     CAACAGAGCA AGAAGAATGT TAGAAAAAGC AAAAGCGGAT AGAAAATTAA GATATGATAG      6540
     GAATACAAAT AATTTCGAAT TAAAAATAGG AGATAAAGTA TTACTTAGAA AAGAAACAGG      6600
     TCATAAGTTA GATAAAAGAT ATGAAGGTCC TTATGACGTA GTAGATATAG GAATAAATGA      6660
     CAATATAACC ATTAAAACAG GAAGTAAGAA ACAACAAATA GTACATAAAG ATAGGCTAAA      6720
     AAAGCACAAA TAGAATGAAA AAAAAAAAGG GCAATCAATG CCAAACCTTT CATAATAAAA      6780
     CTTAAATAAC GGCCTGATCA GCCAAAACAA TATAACAAAG ACATAGACAT AATCGAATTT      6840
     TTATTAATTC AAAATACATA CATATTTTTT CTTTATTCAT TTAAAAATTC TATATCATAA      6900
     ATAATGTTAA TTCATTAAAA ATAATATTTA AGTAATTTTT ATTTTATAAT GGTAATATAG      6960
     TTGATAGAAA ATAACTTCAT TTCTTTACGT TATTTTAAAA AAGAGGGGAG GTGTAGTATG      7020
     TGCATATATC GAGGGTACAC TGTACCTATA AGTACACAGC AACACTTAGT TGCATTGCAT      7080
     AAATAAATGT CTCAAGTGAG CGTGATATAA GATCACCCAT TTATGCTTTA AGCTAAGTCA      7140
     GCATCCCCAC GCTGGCCGCT GGCCATATAT GCGCATAAGC TCTCTCTCTC TCTCTCTTAT      7200
     ACATATATAT ATACGCTGCT CTTCTGCCGC TGTCGACGGC GGCGCAGTCG CAGTATTTAG      7260
     GTAAGATTAG ACACTCTGTA GAGGTTAAGC GGGCAGAACC GTTTCTGCTA CTCGAAGAGA      7320
     TAAGAAGAAA TAAAAAGGTG GCCTGACGGC TGCACCCAAC TGCAAGGAAA ACACGTGTTC      7380
     TCAATTGGTG GCATATATTG GTTTATTACA                                       7410
//
ID   DMZAM      standard; DNA; INV; 8435 BP.
XX
AC   AJ000387;
XX
DR   FLYBASE; FBgn0023131; ZAM.
XX
FT   source          AJ000387:1..8435
FT   SO_feature      five_prime_LTR ; SO:0000425:1..473
FT   SO_feature      three_prime_LTR ; SO:0000426:7963..8435
FT   SO_feature      CDS ; SO:0000316:join(494..531,6387..8004)
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0024272; ZAM\env"
FT                   /db_xref="SPTREMBL:O46113"
FT                   /protein_id="CAA04048.1"
FT                   /translation="MENTLLNLLLVLLSCHGAYQSIFIHNFNSTNLLAKVPVGKTLVIG
FT                   NYKKISHIIDLSEYTNCIEKLYHTIDTLRQDETLTDSISILNAKLAQTQSKIDALTPFS
FT                   RHKRGLINGLGSLVKVVTGNMDANDAKNIETEINHLKSQSTTISDNFEIQNSFNDEVQL
FT                   RFKNLTRHINNEQNLIKNFFENTQNTIYTKIYNNEEEIKKLQYINRLNYNIDLLVSHLS
FT                   DIIESTLLAKINVIPKLILDKTEITKIKQIFKTQNYTIKSEQHIYNLLKMNALNYQNKI
FT                   IFSIKIPIFLSCNYEMARLIPLPINSTQFVIAPKYLIYNNKSNSMFSTMYKCPVIEEQF
FT                   VCEIDSINNLKNNTCLGHLIQNKTSYCDIKETGLTTDVFEPEKGFILVFNGNNLPIISS
FT                   NQTITSINGSAIIKYNNCTLKINEINYDNRAVSTEEHPDFFLPPMRKLIKNATINILTL
FT                   ERLHLDTLTTSNKLLVVAAGNSRHSTTLYILFTVSLVAVILTWTLRRDTHIFHTGPDHI
FT                   LPIVAPPIPPSMAFAPNWGGRSYRPIGTIHHPSL"
FT   SO_feature      CDS ; SO:0000316:1789..2820
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0024271; ZAM\gag"
FT                   /db_xref="SPTREMBL:O46114"
FT                   /protein_id="CAA04049.1"
FT                   /translation="MSKKLTQTIKQTTRSVLESHTFPKRVTRSVSKTNTLPVIRESTPL
FT                   PPLQPINMDSGNASVGNSAPVTPTVSGFSSIATALSATDILAFVKELPTFDGTPGQLDK
FT                   YITSVEEIIMLIRGTDQTPYGLLTLRAIRNKIVGRADEALNLANTKLIWDDIKSNLLRL
FT                   YSSKKSEATLLGELQSLPDNLTLGQLFFGLSRIRSQLISITSNSGQSATIIEAKKTLYD
FT                   EVCLNAFISRIREPLKTVIRLKDPKTIETAYELCQGERARYQNRNPYPPTQNNTERRTN
FT                   NYNNNNNNNHRDNNNRNNVTRLTPKTTQTITQTPIPNIVNQTTATELVTRLKIIKQIMG
FT                   YTT"
FT   SO_feature      CDS ; SO:0000316:<2795..6448
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0024270; ZAM\pol"
FT                   /db_xref="SPTREMBL:O46115"
FT                   /protein_id="CAA04050.1"
FT                   /translation="NKLWATQHRRRKTHPTLPYQLKFSGTRLRNPTGYINPTTHATSLP
FT                   YITLNLQQKFPLSFLIDTGSNNSFIDPESANQLECTILPTSTSITTALNSFKIEEKAIF
FT                   PMPPEFKTEGQITLLKFKFHSYFNGLIGMDLLSHLEAKVDLVNLQLVTSKSTLPIFLYT
FT                   NQASKIFNIPAYSKVILPLPVKTNHGEFYCCTTQLNNELSLSEGLYKSNNNIANVEISN
FT                   QSDSDKLLYLEYPLETIPYNKNDHIELFNISATPLNNDTPQAPLHILTEHLNPEEKTAL
FT                   TTLCKQFRDIFYNPETPLTFTNKITHSIPTIDNTPIHTKSYRYPFVHKTEVKKQIESML
FT                   DQQIIRSSHSPWSAPVWVVPKKLDGTGNRKWRLVIDYRKLNDKTISDRYPIPNINDILD
FT                   SIGKAKYFSTLDLTSGFHQIEMNPKDIAKTAFTVEGGHYEFTRMPFGLKNAPATFQRVM
FT                   DSVLGDLNGTICLFYLDDIIIFSPSLQKHLLDIKMVFEKLRAANFKLQPSKSEFLRKEI
FT                   EFLGHIVTQDGVKPNPNKISAIKKFPCPTNRRAIKSFLGLLGYYRKFIRDFARITKPMT
FT                   KQLKGKRQVTTDKDFVDAFEQCKTLLSNDPILIHPDFEKPFILTTDASNFALGAVLSQG
FT                   SLQNDRPVCFASRTLSDTEVNYSTIEKEMLAIIWAVKYFRPYIYGVKFTIVTDHKPLIW
FT                   LMNFKEPNSKIIRWRLQLMEYNFEIIHKKGSQNVIADALSRADPNLNYNETLTVKPCPT
FT                   SEKPINEFNTQLILEIDTNTSYQTTTPFKQKIRKKYSQPCFDFDNIVKILKGTLKPNRI
FT                   CAFLADDNNSALIEKAFSTYFAHKKHFKIIRCKSLLHEIVGNPEQNKFIQEYHTNSNHR
FT                   GIDETFLHLKRETYFPNMKNKISELIRNCETCLKLKYDRQPQNIVFETPETPSKPLDII
FT                   HIDIYTINNNFNLTIIDKFSKFAAVYPIPNRNGINCIKAIKNFFSQFGLPKKLIHDQGV
FT                   EFCNDIFRKFCSQYNILLHVTSFQQSSSNSPVERLHSSLTEIYRIILDTRKKHKLPTDH
FT                   EEIMSETVITYNNAIHSTTKHTPFELFNGRTHLFEKTIIPNNEHDYLNKLNTFQDKLYS
FT                   EIKEKLSTNTQQRIEKLNTSRVEPTTVQPNSTIFRKENRRNKLTPRFSLHRTAKDKGKT
FT                   LVTTRNQKIHKSKIRKISKPPNDLSLSTCIPDLAMGHTNLSSSTTSIAPTS"
XX
CC   Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1).
CC   Takis Benos and Michael Ashburner, 19-Jan-1998.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 8435 BP; 3286 A; 2055 C; 1151 G; 1943 T; 0 other;
     AGTTACCGAC CCATCGGTAC CATACACCAC CCCTCCCTCT AAGCCACCAC GCCTACACAA        60
     GTAGAAGACA TCGAACCGGG AAGCTTTGCG ATACAAAGTT GCAGCATAAA CATCAACAAC       120
     GGGTCAGACG CCGACATCCG CCCAAAATGC TGACACCACA TCCTTTTCGC TCAGACAGAA       180
     CAACGCATAC AATTCCATAT ACATACGTAT AAACATACTC ATACTTTCTG CTGTGTCAGA       240
     TACTTTATTT CTAAGAACTT TAACATTGTA ATACATACAC ACATATTCAC TGTTAGCCCA       300
     TTTAAGACGA AGAATAAAGA CGACCACAGT CGAGTGCAAG CAGCAAACAC TTGTAGACGT       360
     ACATAATCTC CGATCAAAAT TCTCCCAAGA CGACCGTGGC TACGTTCTGG ACCCGCATAA       420
     CTCCTCTATC TTTCTGAGTG ATAATACCTC CGCAAGACTC CCCGGAGGTA ACTGGCGCAG       480
     CCGGAAAACT GGAATGGAAA ATACTTTATT AAACCTTCTA TTAGTTCTAT TGTAAGTAGT       540
     TGTGGAAAAA GAGTGAGAAT GAAGTGCAGA AATGTCTAAA AGTGATTACA ACAAAAATCC       600
     TAATACAATA CATAAACCGC CTTAACAAAC ATACAAAACA CGCATATAAA AAAAAAAAAA       660
     AAAAAAAAAA GAAAAAAAAA AACCCAAAAC TTAAAAATGC CGTAACCGCG AAACATGATA       720
     TGCGTTGTAC TTGTGTGAAA TCAATCGCTG ATAGTCACTG CCGAAGTTTA TTAAGGCCAA       780
     GTACCATATC ATTACTTTCA TGTTTACATA CATATATATG CCCCACAATT AAAACAACAT       840
     ACACACACAC AAATATTTCA AATGCAAAAA AAAAAAAAAG AATGTAGTGT ACCTGCGTGG       900
     CATCAATCGC TGATAAACCA CTGCCGAAAT ATTAAAGGCC CGGTACTACA TCACAAAACA       960
     CGTATATATG CAACAAAAAT ATACACAACA AAACCATATA TACAAACGTG TATGAGTGAC      1020
     GTGTAATGTA CTTGTGTGAA ATCAATCGCT GATAATCACT GCCGAAGCTT AGTAAGGCCA      1080
     AGTACCACAT CATTACTAAC ATGTGTACAT ATATATATAT GCAAAACAAT TAAAACAACA      1140
     TACACACACA CAAATATTTC AAATGCAAAA AAAAAAAAAA AAGAGGAAAT GTTGTGTACC      1200
     TGCGTGGCAT CAATCGCTGA TAAACCACTG CCGAAATATT AAAGGCCCGG TACTACATCA      1260
     CAAAACACGT ATATATGCAA CAAAAATATA CACAACAAAA CCATATATAC AAACGTGTAT      1320
     GAGTGACGTG TAATGTACTT GTGTGAAATC AATCGCTGAT AATCACTGCC GAAGCTTAGT      1380
     AAGGCCAAGT ACCACATCAT TACTAACATG TGTACATATA TATATGCAAA CCACCAAAAC      1440
     AAATACATAT ACACATACAA ACACTCCAAA AAAAAAAACA AATAATACTA TATGAACGGC      1500
     GAAGCGTATG TTTTCTAAGG CTGGATACAA AACCACAAAA CCAAATATAA ATTGCACACC      1560
     TTAATAAAGA AAAGAACAAA AATGATAATA AACAAAAGAA ATTTTTTTTG GAACATGCAC      1620
     CCATACTCTC ACTCTTTCAA CACAAATAAA GTATTCAAAT TATACATACA TACAATAATA      1680
     CCACTATATT ACAGAAATTA ACGCACAAGA AAACACACAC ACTATCCAAC AACAAACAAG      1740
     TAATTAAGAG TTATTAAGTA CATTGTAAAC TACATATTTT TATCTTAAAT GTCAAAGAAA      1800
     TTAACACAAA CTATTAAACA AACAACTCGC TCCGTGTTAG AATCACACAC ATTTCCCAAA      1860
     AGAGTTACAC GATCAGTTTC GAAAACAAAC ACCCTCCCCG TAATAAGAGA AAGCACCCCC      1920
     TTACCGCCCC TTCAACCTAT AAATATGGAT TCGGGCAACG CCTCCGTAGG TAATTCCGCC      1980
     CCCGTAACAC CTACTGTCAG TGGCTTTAGC AGTATTGCTA CGGCACTTAG TGCCACCGAT      2040
     ATTTTAGCCT TCGTTAAAGA ACTTCCGACC TTCGATGGTA CTCCAGGCCA ACTCGACAAA      2100
     TATATAACTA GCGTTGAGGA AATAATCATG CTCATTAGGG GTACCGACCA AACTCCGTAC      2160
     GGACTTCTGA CACTCAGGGC AATTAGGAAT AAAATAGTTG GAAGAGCAGA CGAAGCTCTA      2220
     AACCTAGCCA ACACCAAACT TATATGGGAC GATATCAAAA GTAACCTACT ACGTTTATAC      2280
     TCTAGCAAGA AAAGCGAAGC TACCCTCTTA GGCGAGCTCC AATCTCTCCC AGATAACCTA      2340
     ACCCTAGGGC AATTGTTCTT CGGCTTATCG AGGATTAGGA GCCAACTTAT ATCCATTACT      2400
     TCCAATAGTG GACAGTCGGC CACAATCATC GAAGCCAAGA AAACACTATA TGACGAAGTC      2460
     TGTTTAAACG CCTTCATCTC AAGAATTAGA GAACCACTTA AAACAGTCAT CAGATTGAAA      2520
     GACCCCAAGA CTATCGAAAC AGCTTACGAG CTATGTCAAG GAGAAAGGGC TCGTTACCAG      2580
     AACAGAAACC CATATCCCCC AACACAAAAC AACACCGAAC GACGAACTAA CAACTACAAT      2640
     AACAATAACA ACAACAATCA CAGAGACAAC AACAACCGCA ACAACGTAAC TCGTCTTACA      2700
     CCCAAAACCA CTCAAACCAT TACTCAAACC CCAATTCCCA ATATCGTCAA TCAAACAACG      2760
     GCAACAGAAC TAGTAACCCG TTTAAAGATA ATAAAACAAA TTATGGGCTA CACAACATAG      2820
     AAGAAGAAAA ACTCACCCAA CACTGCCTTA CCAACTTAAA TTTTCAGGCA CCCGCCTCAG      2880
     GAACCCAACA GGATACATAA ATCCTACCAC ACATGCAACA TCCCTTCCAT ACATAACTCT      2940
     AAACCTCCAA CAAAAATTCC CTTTATCATT TCTTATCGAT ACAGGATCCA ATAACTCCTT      3000
     CATTGACCCA GAATCTGCAA ACCAACTAGA GTGCACAATT CTACCAACAT CCACTTCAAT      3060
     TACAACAGCA TTAAATAGTT TCAAAATTGA AGAAAAGGCA ATATTCCCAA TGCCACCCGA      3120
     GTTCAAAACC GAAGGTCAAA TTACCCTACT TAAATTCAAA TTTCACTCTT ATTTCAATGG      3180
     CCTCATAGGA ATGGACCTAT TATCACACCT AGAAGCAAAA GTAGACCTAG TAAACTTACA      3240
     ACTAGTAACT TCAAAGTCTA CACTCCCAAT ATTCTTATAC ACTAACCAGG CTTCAAAAAT      3300
     TTTTAACATC CCCGCCTACA GTAAAGTTAT CTTACCACTA CCAGTAAAGA CTAATCATGG      3360
     GGAATTCTAT TGTTGTACTA CACAACTAAA TAATGAGTTA TCGTTGTCAG AAGGACTATA      3420
     TAAATCAAAC AATAATATTG CCAATGTCGA AATCTCTAAC CAATCCGACT CAGATAAACT      3480
     ATTATACCTA GAATACCCCC TAGAAACCAT TCCATACAAT AAAAACGACC ATATAGAGCT      3540
     CTTTAATATA TCAGCTACAC CTCTTAATAA CGATACCCCT CAAGCCCCAT TACATATCCT      3600
     CACAGAACAC CTCAATCCAG AGGAAAAAAC AGCCTTAACA ACCCTATGTA AACAATTTCG      3660
     CGACATATTC TACAACCCAG AAACACCATT AACTTTTACC AACAAAATCA CACACTCCAT      3720
     CCCAACCATA GATAACACTC CTATCCACAC AAAATCCTAC AGATACCCTT TTGTCCATAA      3780
     AACAGAAGTC AAAAAACAAA TCGAATCCAT GTTAGACCAA CAAATTATTA GATCTAGCCA      3840
     CTCCCCTTGG AGCGCCCCGG TGTGGGTGGT CCCAAAAAAA CTAGACGGGA CAGGGAACAG      3900
     GAAATGGCGA CTTGTAATAG ACTACCGGAA ACTCAACGAC AAAACCATTT CGGACAGATA      3960
     CCCCATCCCA AACATAAATG ACATATTAGA TAGCATAGGC AAAGCAAAAT ATTTCTCAAC      4020
     GCTCGACCTA ACTAGCGGTT TTCATCAAAT CGAGATGAAT CCAAAAGATA TCGCCAAAAC      4080
     AGCCTTTACA GTCGAAGGGG GTCACTACGA ATTCACACGG ATGCCCTTCG GCTTAAAAAA      4140
     CGCACCGGCT ACCTTTCAAC GGGTTATGGA CAGCGTTCTT GGCGATCTCA ACGGCACCAT      4200
     TTGCCTATTC TATCTTGACG ATATTATAAT TTTCTCGCCT TCCCTACAAA AACACCTGTT      4260
     GGACATAAAA ATGGTATTCG AAAAACTCAG AGCGGCAAAC TTTAAACTAC AACCTTCAAA      4320
     ATCAGAATTC CTAAGGAAAG AGATAGAATT TCTAGGCCAC ATAGTCACAC AAGACGGAGT      4380
     TAAACCAAAC CCGAACAAAA TAAGTGCGAT CAAAAAATTT CCTTGCCCCA CCAACAGAAG      4440
     AGCTATCAAA TCTTTTCTCG GGTTACTGGG TTATTATAGG AAGTTTATAA GAGACTTTGC      4500
     ACGAATAACG AAGCCCATGA CTAAACAATT GAAAGGGAAA AGACAAGTTA CTACAGACAA      4560
     AGACTTTGTA GACGCATTCG AACAGTGCAA AACTCTTCTG TCCAATGACC CAATACTCAT      4620
     ACACCCAGAC TTCGAAAAAC CATTCATTCT TACTACGGAT GCTAGTAACT TCGCGTTAGG      4680
     AGCCGTACTA TCTCAAGGCT CCTTACAAAA CGATAGACCT GTATGTTTTG CCAGCAGGAC      4740
     CCTCTCCGAC ACCGAAGTCA ACTATTCAAC CATAGAAAAA GAAATGTTGG CAATAATATG      4800
     GGCAGTAAAA TACTTCAGAC CATATATTTA TGGCGTAAAA TTTACTATTG TTACAGATCA      4860
     CAAGCCACTA ATATGGCTTA TGAATTTCAA AGAACCCAAC TCAAAAATAA TTCGTTGGAG      4920
     ACTCCAACTC ATGGAATACA ATTTTGAAAT AATTCACAAG AAAGGTTCAC AAAATGTAAT      4980
     TGCAGACGCC TTAAGTAGAG CGGACCCAAA TTTAAACTAC AACGAAACAC TGACTGTTAA      5040
     GCCTTGCCCC ACATCCGAAA AACCTATTAA CGAATTTAAC ACGCAACTCA TACTAGAAAT      5100
     AGATACAAAT ACGTCTTACC AAACTACAAC ACCATTTAAA CAAAAGATTA GGAAAAAATA      5160
     TTCACAGCCT TGCTTCGATT TCGATAATAT TGTTAAAATC TTGAAAGGAA CCCTAAAACC      5220
     TAACAGGATT TGCGCATTCT TGGCGGACGA TAATAATTCC GCATTAATCG AAAAAGCATT      5280
     CTCAACGTAT TTTGCACATA AAAAACACTT TAAAATTATC AGATGCAAAT CACTTCTCCA      5340
     CGAAATCGTA GGAAACCCCG AACAAAACAA ATTCATTCAG GAATATCACA CTAACAGCAA      5400
     CCACAGAGGC ATAGACGAAA CATTCCTTCA CCTCAAACGA GAAACCTACT TCCCCAATAT      5460
     GAAAAACAAA ATCTCTGAAT TAATTAGGAA TTGCGAAACC TGTCTAAAAC TCAAATACGA      5520
     CAGGCAACCA CAAAATATAG TATTTGAAAC CCCAGAAACC CCATCGAAAC CCCTCGACAT      5580
     AATACACATA GACATCTATA CTATTAACAA TAATTTTAAC CTGACAATCA TAGACAAATT      5640
     CTCAAAATTC GCAGCTGTCT ACCCCATCCC AAATAGAAAC GGCATCAATT GCATCAAAGC      5700
     AATCAAAAAT TTTTTCAGTC AATTCGGACT ACCCAAAAAA CTAATACACG ACCAAGGAGT      5760
     AGAATTTTGC AACGACATAT TTCGAAAGTT TTGCTCTCAA TATAATATAC TTCTCCATGT      5820
     CACATCCTTC CAGCAATCTT CAAGTAATTC TCCAGTAGAA CGTTTACACT CCTCTTTGAC      5880
     AGAGATTTAC AGAATAATAC TAGACACACG GAAAAAACAC AAATTACCTA CAGACCACGA      5940
     AGAAATAATG TCAGAAACTG TAATAACATA TAACAACGCA ATCCACTCCA CCACCAAACA      6000
     CACCCCTTTT GAACTTTTTA ATGGTAGGAC CCATTTATTC GAGAAAACAA TAATACCCAA      6060
     TAATGAGCAT GACTATTTAA ATAAACTAAA TACGTTCCAA GACAAACTAT ACTCCGAAAT      6120
     AAAAGAAAAA TTGTCCACAA ACACCCAACA AAGGATAGAA AAGCTAAACA CAAGCAGAGT      6180
     AGAACCAACA ACAGTACAAC CTAACAGCAC AATTTTCAGA AAAGAAAACA GGAGAAATAA      6240
     ATTAACACCA CGGTTTTCCT TACACAGAAC AGCAAAAGAC AAAGGAAAAA CTCTAGTAAC      6300
     CACAAGAAAT CAAAAAATCC ACAAATCAAA AATTAGGAAA ATATCCAAAC CTCCAAATGA      6360
     CTTAAGCCTT TCCACCTGCA TTCCAGATCT TGCCATGGGG CATACCAATC TATCTTCATC      6420
     CACAACTTCA ATAGCACCAA CCTCCTAGCA AAAGTGCCGG TAGGGAAAAC ACTCGTGATA      6480
     GGAAACTATA AAAAAATTAG CCACATAATC GATCTGTCCG AATACACCAA CTGTATTGAA      6540
     AAATTATACC ACACCATCGA TACCCTAAGA CAAGATGAAA CACTCACCGA TTCTATATCA      6600
     ATACTAAATG CTAAACTGGC CCAAACTCAA AGTAAAATAG ACGCACTAAC ACCCTTTTCA      6660
     CGCCACAAAA GAGGTCTTAT TAACGGGTTA GGTAGTTTAG TCAAAGTCGT CACCGGCAAC      6720
     ATGGACGCCA ATGATGCAAA GAATATAGAA ACAGAAATTA ACCACTTAAA AAGCCAGTCC      6780
     ACCACTATCT CAGATAACTT CGAAATACAG AACTCGTTCA ATGATGAAGT TCAACTACGG      6840
     TTCAAAAACT TAACAAGACA CATTAACAAT GAACAGAATT TGATTAAAAA CTTCTTCGAA      6900
     AACACTCAAA ATACAATTTA CACAAAAATA TACAACAACG AAGAAGAAAT AAAGAAACTA      6960
     CAATATATAA ATAGGCTTAA CTACAATATA GATTTATTAG TTAGCCACCT AAGCGACATT      7020
     ATAGAAAGTA CACTGCTTGC CAAAATTAAT GTTATCCCAA AACTCATCTT AGACAAGACA      7080
     GAAATAACCA AAATCAAACA AATTTTTAAA ACACAAAACT ACACAATAAA ATCCGAGCAA      7140
     CACATTTATA ACCTCTTAAA AATGAACGCA CTCAATTACC AAAACAAAAT AATTTTTAGT      7200
     ATCAAAATTC CTATTTTTTT AAGTTGTAAC TACGAAATGG CAAGATTAAT TCCACTTCCA      7260
     ATAAATTCCA CACAATTTGT AATAGCACCT AAGTACTTAA TATATAATAA CAAAAGTAAC      7320
     AGCATGTTTT CAACTATGTA TAAATGTCCT GTAATAGAAG AACAATTCGT CTGCGAAATC      7380
     GACTCCATCA ATAATCTTAA AAATAATACT TGCCTGGGAC ACCTTATCCA AAATAAGACC      7440
     AGCTACTGCG ACATAAAGGA AACGGGACTC ACGACTGATG TGTTCGAACC GGAAAAAGGC      7500
     TTCATACTTG TATTTAACGG GAACAACCTC CCAATCATCT CCTCCAACCA GACCATAACT      7560
     AGTATCAATG GATCAGCTAT AATAAAGTAT AACAATTGCA CATTAAAAAT CAATGAAATA      7620
     AACTACGACA ACAGGGCGGT ATCAACAGAA GAGCACCCCG ACTTCTTCCT ACCACCAATG      7680
     CGGAAACTAA TAAAAAATGC CACTATCAAC ATACTCACCT TGGAAAGACT TCACCTGGAT      7740
     ACACTCACAA CATCCAATAA GCTACTGGTC GTCGCCGCAG GAAACTCTCG ACACTCGACA      7800
     ACCTTGTATA TCCTCTTCAC CGTATCCCTA GTCGCCGTAA TACTCACCTG GACACTTCGA      7860
     AGGGACACCC ACATCTTCCA TACCGGGCCC GACCACATTC TTCCAATCGT CGCTCCACCA      7920
     ATTCCTCCGT CTATGGCCTT CGCTCCAAAC TGGGGGGGGA GGAGTTACCG ACCCATCGGT      7980
     ACCATACACC ACCCCTCCCT CTAAGCCACC ACGCCTACAC AAGTAGAAGA CATCGAACCG      8040
     GGAAGCTTTG CGATACAAAG TTGCAGCATA AACATCAACA ACGGGTCAGA CGCCGACATC      8100
     CGCCCAAAAT GCTGACACCA CATCCTTTTC GCTCAGACAG AACAACGCAT ACAATTCCAT      8160
     ATACATACGT ATAAACATAC TCATACTTTC TGCTGTGTCA GATACTTTAT TTCTAAGAAC      8220
     TTTAACATTG TAATACATAC ACACATATTC ACTGTTAGCC TATTTAAGAC GAAGAATAAA      8280
     GACGACCACA GTCGAGTGCA AGCAGCAAAC ACTTGTAGAC GTACATAATC TCCGATCAAA      8340
     ATTCTCCCAA GACGACCGTG GCTACGTTCT GGACCCGCAT AACTCCTCTA TCTTTCTGAG      8400
     TGATAATACC TCCGCAAGAC TCCCCGGAGG TAACT                                 8435
//
ID   DME010298  standard; DNA; INV; 8507 BP.
XX
AC   AJ010298;
XX
DR   FLYBASE; FBgn0015945; GATE.
XX
SY   synonym: Batumi
XX
FT   source          AJ010298:1..8507
FT   SO_feature      five_prime_LTR ; SO:0000425:1..272
FT   SO_feature      three_prime_LTR ; SO:0000426:8236..8507
FT   SO_feature      polyA_signal_sequence ; SO:0000551:158..163
FT   SO_feature      polyA_signal_sequence ; SO:0000551:8383..8398
FT   SO_feature      primer_binding_site ; SO:0005850:276..293
FT   SO_feature      RR_tract ; SO:0000435:8236..8507
FT   SO_feature      CDS ; SO:0000316:1741..6456
FT                   /db_xref="FLYBASE:FBgn0044067; GATE\polyprotein"
FT                   /db_xref="SPTREMBL:O76925"
FT                   /protein_id="CAA09069.1"
FT                   /translation="MPIGDDKKKLSADKPRSIFSPQGPKSPRIPSISVKTPAQISDDCA
FT                   TPSKATVQRTAKNMAASDLALAKFISVSDAQANLRLRSTLRNPQLQPSRCLASVATKSE
FT                   AYGTRLKRIRPLLRVPCVSRRAAASGMPILRASYSYCYSVYERCVAQLVDKIEQGHFSV
FT                   HPKRTLRPRPTFPLAVGCLHAIQEFSQVTIFAGRFPDLLHAIYINNPRLTPFEKLFHLN
FT                   AKTSGDAHAIVSISPLTKRGFSSAWENLIERFENKRLLVNSQLKILFNVQSIPQESGAA
FT                   LKVMQSTVQGCLTALELSGINTENWDCLLEYLCSSKLPKITLSLWEQSLHKKADIPTWG
FT                   ELNTFLTERHRTLEAIDDVRPSVPSQSHSKAMNSSGPSRDGKLASDLCNKENHPVRVCR
FT                   VFSKWSVDDRSAYIKRKQLCLNYFAKGHQLRECKDRQSFTWWPASHVVAPKQPLFQQFK
FT                   PFKSCKPNFRYSGQFRSKRASRCSKLFCHGSRAILLGSAIINSSHLGTNFKARALIDSG
FT                   SEATFITEPLFNLIRLPFQVVQAQVSGLNQTVAAQFKNAAVSPSDLRLGRVAVGDDGLC
FT                   PPSTSRKSAFLPNSAKFLRDLPDFPLADPKFYESAPIDVLIRSPHPASVLLSGAKTNIC
FT                   GSLLGQETIFRWVLTGPVSASAQSRIPLFRHRSPTRTIIHWTNSSQNLGRWRIYQQSCK
FT                   RIRFHVRERVGKCLRRHQCGKYVVTLPFRDPEHIGCGLGHSRSWALAQFLKNEQRLKKD
FT                   EALKARYDSVIQEYLDLKHMRQVLPTHDCNAYYMPHHAVLKPESVTTKLRVVFNASSPS
FT                   SNGTSLNDILHAGPVLQSDLTVQILKWRDFRYVFSADIQKMYRQIWVDPKHTPFQRILF
FT                   RNNRGEIRDFELKTVTFGVNCAPLLAIRVLQQLAADEELSHPKASNVIRNFMYVDDVLA
FT                   GADSTEEAQLMVHELRDALNSSSSRQRWLSKRPLQRQVLSQIAKLFDPAGWLAPFIVRA
FT                   KIFMQEIWLQELGWDENVPNDLFQRWLNFLQSYSVFEQIRIPRWLSFHPDFKVEHHGFC
FT                   DASQKAYGAAIYVRGEVGSAIMVQLLTAKTRVAPVKTVSLPRLELCGALLLSEMAAAII
FT                   PQMPTINSKLYCWTDSTIVLAWLSKPACQWTTFVANRETKIAQATKTENWSHVQSEHNP
FT                   ADLASRGVSLQDLADSQLWWHGPTWLQNPRNQWPTQVNAPVTDLEKRALKVHLAKAPSE
FT                   ELLARFSKLEKALRVLAYVYRFIQRCRKQTSPSDVHLLATEIAAAERFLISNTQRREFP
FT                   VEYHCLSEKRPVPSSSAILSMNPFLDPQGLIRACGRVAASESPQYNERHPVILPYNCLL
FT                   SRLLAKFTHRTTLHGGNQLMVRLIRSKYWIPRIKNLMKAVVNSCKVCVIHKRRLQSQLM
FT                   GVLPKERASFSRPFTVSAWITPVRDIKNYTGRACVITKGYVLVFVCFSTKAIHLEPTSD
FT                   LTTEKFLAAFSRFVSRRGCPRQVQSDNGKTFVGAATLLSRDFLQAVKESVTNAYIHQEM
FT                   QWQLFSGGTQYGRPLGSRRKKLQDAILQMHGHTKIHVRRTLHALGKNRSVP"
XX
CC   Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1).
CC   Takis Benos and Michael Ashburner, 08-Sept-1998.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 8507 BP; 2245 A; 2251 C; 1836 G; 2175 T; 0 other;
     TGTTCAAGTT ACGCTCACCC GCTGTCACCC GCTGTCACCC GCTCTCCGCT CCCTCTTACG        60
     CTCTCCCGCT CTTCACCTCA GAGTCTCCAA GGAGTCCTCG GGCTTGGGAT AGCCTAACTA       120
     ATTAGAATAA GCATCAGTGT AAAAACTAAC CACGCTGAAT AAACATACGC CCGGTCGCCG       180
     CGCAATTACG AAAAGTCTAG TGTTTGCTTT CCTTCGAGTG TTTCTTTTCA GCATATTTGA       240
     ATTCAGGACA GCCATCCCCC TACATCCCAA CATTTTGGTC CTTCGAGCCG GATCACCTGG       300
     ATTTTCAAGT TTGTCCACCA GCGAACAAAT TATAAGATAA GTACGAAATT TCCATTCCTT       360
     TTAATTGCCG GTCTGCAGCA AAAGGTTCGA AAATCCAATT TCGTTCAATT TGCTGTAAGA       420
     TTTATTGTCA AATCTAACGG ATTTCTCCGA CAAAAGGCAA TTAAAGAAAA GTACTTATCC       480
     AATCTCACGG GCGCCGCATA TTACTCGCCG TTCTCCGTTC TCCTTTCACC CTCATTCGTG       540
     AAAATTTCTA AAGTCCAAAT GGGCGAATAT ATTTAAATAT TAATCCAGTG CGATAATGCA       600
     AAATTCCAAA TGTGAAAAAG TGAATAATTT GTGCCAAGTT CAGTGAAACT TTCTAAGTCC       660
     AAAGCTCTGC CAAAATTGGC AAAAATTCTG TTCTCGTTTC ACTGTGTCAA AGCGAAGCCA       720
     AACTTCTTTT CGCAACACAT TTTTGCTTTA ACTCCGCAGT CCACTTAATA CCATTTGCTT       780
     TGCTATCGAA GAATACCACA ACGAAACAAA CAACACCATA CCCTCTGGCC ATTCAAATAA       840
     CATATTAATT AACATTTCCG CAGTTCCATA TCTCTTACAT CAACATATAC CTACTCCATA       900
     CTCTTGCATA TATTCACATC TTACACAATA TATCCTCACC ATATATTACA TATATTACAT       960
     CAACATATAA TATCCACATA TATTACCGAC ATACATTGCG CATATTATCA GCATTCCTTT      1020
     AACGTATACC AAAGTTTAAA TTCGATCCCG TCGGCAAATC CAACCACAAA TAAAATTTAT      1080
     TCCAAGTGCC GACGCGGAAA GGCGTTTTCT TTTCCATCAA TTTTTTCCGT AAATTTCCAA      1140
     ATTAATTTCC GAGCAATAAA TTAAAAGCGG TTTTTTCTTT TTTTTTAACA AATAACTTAT      1200
     TGTTGAAAAC ATTTATTAAA TTATTAAAAA TTATATAAAT AATACGACCG CCAAATACAA      1260
     GTCGTTCACC CGACAAATAT TTTTTCCTGT ATTGCTTGGA TATTAATTTG TGTTTGTTTT      1320
     AGAAGTACTT ACAACGCGGA GAAAAGACTC CAAATCCACC ATTCCATTTT CTCCGTTTCC      1380
     AGTTATAAAC AAAAAAATAA ATAAAATTTT CTTCCTTCTA ATAAACATTT TATTTTACCG      1440
     TGTTCACATT CCAAGTGTTC CAACCGTAAA TAAGGTGGAC CTAATTACCA TAAATCACAG      1500
     GTCATTTATA CAATTCGCTG TTCACTCCGA GTCACCTGTC CAATTAGTCT AAACTACGGC      1560
     GTTTCCACTT CGCAAATTCA ACACCACTTT CTCACCCATT ACATCCTATA CGGTCCTTTT      1620
     CCGCTGCTTT ATACCGTTCA CGGCAGGAAG CTTAAATTTA TTAAGTGGAA TCTGTCTACT      1680
     TTTTCAAAAG TGTGACCGGG CTCCAAAAAC GCTTCCCTTC CATTTCGTAT TTCTTCGATT      1740
     ATGCCCATCG GGGACGATAA GAAGAAATTG TCCGCTGACA AACCCAGGTC TATTTTTTCA      1800
     CCACAAGGGC CCAAGAGTCC AAGAATCCCA AGCATTTCGG TGAAAACGCC TGCGCAGATT      1860
     TCCGACGACT GTGCCACTCC ATCCAAAGCC ACAGTACAGC GCACAGCTAA AAATATGGCT      1920
     GCTTCCGATC TAGCGCTAGC CAAATTCATT TCGGTTTCTG ACGCTCAAGC GAATTTGAGG      1980
     CTCAGATCAA CACTCCGGAA TCCGCAGCTC CAACCGTCAC GATGCTTAGC GTCCGTCGCG      2040
     ACCAAGTCCG AAGCCTATGG GACAAGGTTG AAAAGAATTC GACCTCTGCT CAGAGTGCCT      2100
     TGTGTCAGCA GGCGAGCGGC AGCAAGCGGC ATGCCTATTC TCAGGGCTAG TTACAGTTAT      2160
     TGCTATTCAG TCTATGAAAG GTGTGTTGCC CAGCTCGTTG ATAAAATCGA GCAGGGGCAC      2220
     TTCTCAGTCC ATCCCAAGCG AACGCTGCGG CCCAGGCCTA CATTTCCTCT GGCTGTCGGT      2280
     TGCCTCCATG CGATACAGGA GTTTTCGCAG GTGACTATCT TCGCTGGCCG CTTTCCGGAT      2340
     CTTTTACACG CCATTTATAT TAATAATCCA CGGCTGACTC CGTTCGAAAA GTTATTCCAC      2400
     TTAAATGCCA AAACAAGTGG CGACGCGCAT GCCATAGTTT CGATTTCGCC TCTCACCAAA      2460
     CGAGGGTTTT CCTCTGCGTG GGAAAACCTA ATAGAGCGTT TCGAAAATAA ACGATTGTTG      2520
     GTAAACAGTC AATTGAAAAT ACTGTTTAAT GTGCAGTCGA TACCACAGGA ATCTGGGGCG      2580
     GCCTTGAAGG TAATGCAAAG TACTGTTCAA GGTTGCTTGA CTGCCTTAGA ACTGTCAGGC      2640
     ATCAACACTG AGAACTGGGA CTGCCTGCTG GAATATCTGT GTTCATCCAA GCTCCCGAAG      2700
     ATAACTCTCT CCTTATGGGA GCAGTCTCTA CATAAGAAAG CCGACATCCC GACATGGGGA      2760
     GAACTGAACA CCTTCCTCAC AGAACGTCAT CGAACCCTAG AGGCCATCGA TGATGTGAGA      2820
     CCGTCCGTAC CAAGTCAGTC GCACTCCAAA GCGATGAACT CAAGTGGGCC CTCTAGAGAT      2880
     GGCAAGCTGG CGTCCGACTT GTGCAACAAG GAAAACCATC CTGTCCGTGT ATGTCGCGTT      2940
     TTCTCCAAAT GGTCGGTTGA CGACCGGTCA GCCTACATTA AACGGAAGCA GTTATGCTTA      3000
     AACTACTTTG CAAAGGGACA TCAGCTTCGT GAGTGCAAAG ATCGACAAAG TTTTACTTGG      3060
     TGGCCGGCAT CACACGTTGT TGCACCGAAA CAACCTCTTT TCCAGCAATT CAAGCCCTTC      3120
     AAATCCTGCA AGCCCAATTT CCGCTACTCA GGCCAATTTC GTTCCAAACG AGCAAGCCGG      3180
     TGTTCAAAAT TATTTTGCCA CGGCTCAAGA GCTATCCTTC TTGGCAGTGC CATAATCAAT      3240
     AGTTCCCATC TTGGCACTAA CTTTAAGGCA CGCGCCCTGA TCGACTCCGG ATCAGAGGCG      3300
     ACATTCATAA CCGAGCCACT GTTCAATCTA ATTAGATTGC CATTCCAGGT GGTTCAAGCC      3360
     CAAGTCTCGG GCTTAAACCA AACAGTAGCT GCTCAGTTCA AGAACGCTGC AGTTTCACCA      3420
     TCCGATCTCC GACTAGGCCG CGTTGCAGTT GGAGACGACG GCCTATGTCC TCCCTCAACT      3480
     AGCCGGAAAT CTGCCTTCCT ACCCAATTCC GCAAAATTTC TTCGGGATCT TCCCGATTTT      3540
     CCACTGGCGG ATCCAAAATT CTATGAGAGC GCCCCAATAG ATGTACTTAT CCGGAGCCCA      3600
     CATCCTGCTT CGGTGCTTCT GAGTGGAGCA AAAACCAACA TCTGTGGCTC TCTCTTGGGG      3660
     CAAGAGACCA TTTTCCGCTG GGTACTAACT GGGCCAGTGT CAGCCTCAGC CCAAAGCAGG      3720
     ATTCCTCTTT TTCGACACAG ATCTCCCACG CGTACGATAA TTCACTGGAC AAACTCCTCA      3780
     CAAAATTTGG GGAGGTGGAG GATATACCAA CAAAGTTGCA AAAGAATCCG ATTCCATGTG      3840
     CGAGAACGGG TTGGTAAATG CTTACGACGA CACCAGTGCG GCAAATATGT CGTTACTCTG      3900
     CCTTTTCGCG ACCCAGAACA TATCGGTTGC GGGCTAGGGC ATTCTAGGTC TTGGGCGTTG      3960
     GCTCAGTTCT TGAAGAATGA GCAGCGTCTA AAAAAAGATG AGGCCTTGAA AGCGAGATAC      4020
     GATTCGGTGA TCCAGGAATA TCTCGACTTA AAGCACATGC GACAAGTTCT GCCTACCCAT      4080
     GATTGCAACG CCTATTATAT GCCACATCAC GCCGTCTTAA AACCGGAGAG TGTAACTACT      4140
     AAACTCCGTG TAGTATTCAA TGCCTCCAGC CCTTCATCGA ATGGTACCAG TTTAAATGAT      4200
     ATCCTTCATG CTGGCCCTGT CTTGCAGTCC GACTTGACAG TGCAAATTCT GAAGTGGCGC      4260
     GATTTCCGAT ACGTGTTCAG TGCCGATATT CAAAAAATGT ATCGGCAGAT CTGGGTAGAT      4320
     CCGAAACACA CTCCATTCCA GCGAATACTT TTCCGTAACA ATAGAGGGGA AATCAGAGAT      4380
     TTCGAATTGA AAACAGTAAC CTTTGGAGTC AATTGCGCGC CCTTGCTGGC GATCCGAGTA      4440
     CTGCAGCAGC TAGCAGCTGA CGAAGAACTC AGCCATCCAA AAGCTAGCAA TGTCATTCGA      4500
     AATTTCATGT ATGTGGATGA TGTTTTAGCC GGAGCGGACT CTACGGAAGA AGCTCAGCTC      4560
     ATGGTGCACG AGCTCCGAGA CGCTCTGAAT TCTTCTTCGT CCCGCCAGAG ATGGCTATCG      4620
     AAACGTCCTT TACAACGCCA AGTCCTGTCC CAAATTGCCA AATTGTTCGA CCCTGCAGGC      4680
     TGGTTAGCAC CGTTTATCGT TCGAGCTAAA ATTTTCATGC AGGAGATTTG GCTACAGGAG      4740
     CTTGGGTGGG ACGAAAACGT TCCAAATGAC CTTTTTCAGC GATGGCTTAA TTTTCTCCAA      4800
     AGTTATTCGG TTTTCGAGCA GATACGCATT CCACGCTGGC TATCGTTTCA TCCAGATTTC      4860
     AAGGTCGAGC ATCATGGCTT TTGCGATGCA TCGCAAAAGG CTTATGGCGC CGCAATATAT      4920
     GTCCGCGGAG AAGTGGGCAG CGCCATTATG GTGCAACTCC TAACCGCCAA AACCCGGGTA      4980
     GCACCAGTCA AAACGGTTTC GCTCCCAAGA CTCGAGCTCT GCGGAGCGTT ATTGCTTTCC      5040
     GAAATGGCTG CAGCCATCAT TCCGCAGATG CCTACGATTA ACTCCAAACT TTACTGTTGG      5100
     ACGGACTCCA CCATAGTGCT TGCATGGTTA AGCAAGCCAG CATGCCAGTG GACCACATTT      5160
     GTAGCCAATA GGGAGACGAA GATCGCCCAG GCCACAAAAA CAGAGAATTG GTCTCATGTT      5220
     CAATCTGAGC ATAATCCAGC AGACCTGGCA AGTAGAGGAG TTTCCCTCCA AGATCTAGCC      5280
     GATAGCCAGT TATGGTGGCA CGGACCGACT TGGTTGCAAA ATCCACGCAA CCAATGGCCT      5340
     ACTCAGGTCA ACGCTCCGGT GACCGACCTG GAGAAGCGTG CTCTAAAAGT CCATCTCGCG      5400
     AAAGCTCCTT CTGAAGAGTT GTTGGCACGT TTCTCCAAGC TAGAGAAAGC TCTACGAGTC      5460
     CTTGCCTATG TTTATCGCTT CATTCAGCGG TGCAGGAAGC AGACATCTCC ATCTGATGTT      5520
     CATCTACTGG CCACTGAAAT CGCCGCCGCC GAGCGGTTCC TAATTTCGAA CACTCAACGC      5580
     AGAGAATTCC CTGTGGAATA TCACTGCCTA AGTGAAAAGC GTCCAGTGCC AAGTTCAAGT      5640
     GCCATCCTAA GCATGAACCC GTTTCTAGAT CCGCAAGGAC TGATCAGGGC ATGCGGCCGT      5700
     GTGGCGGCTT CCGAAAGCCC TCAATACAAT GAACGCCATC CAGTGATTCT TCCGTATAAC      5760
     TGCCTGCTTT CTCGCCTCCT TGCGAAGTTC ACGCATCGCA CAACTCTCCA TGGTGGTAAC      5820
     CAGTTAATGG TGCGCCTCAT CCGGTCGAAA TACTGGATTC CGAGAATCAA GAACCTGATG      5880
     AAAGCAGTGG TAAATTCGTG CAAAGTATGT GTGATCCACA AAAGGCGGTT GCAAAGCCAA      5940
     CTGATGGGTG TCCTGCCCAA AGAAAGAGCA TCGTTCTCCC GACCATTCAC GGTATCGGCA      6000
     TGGATTACGC CGGTCCGCGA TATAAAGAAC TATACGGGAA GAGCATGTGT TATTACAAAG      6060
     GGGTATGTGT TAGTTTTTGT TTGTTTCTCC ACCAAGGCCA TCCACTTAGA GCCTACATCT      6120
     GACTTAACGA CCGAGAAGTT TCTTGCCGCT TTCTCTCGTT TTGTATCCAG GAGAGGGTGT      6180
     CCACGTCAAG TCCAGTCAGA CAATGGCAAA ACCTTTGTTG GCGCTGCCAC CCTGCTTTCC      6240
     CGCGATTTCC TTCAAGCCGT AAAAGAGTCG GTGACGAATG CCTATATTCA TCAAGAGATG      6300
     CAATGGCAAT TATTCTCCGG GGGCACCCAA TATGGGAGGC CTTTGGGAAG CAGGCGTAAA      6360
     AAGCTTCAAG ACGCTATTTT ACAAATGCAC GGCCACACGA AAATACACGT TCGAAGAACT      6420
     CTCCACGCTC TTGGCAAAAA TAGAAGCGTG CCTTAACTCC AGGCCGCTCT CTCCTATGTC      6480
     TGAAGATCCG ACAGACTTGC TGGCTCTGAC GCCAGGGCAT TTCCTTGTCG GGGGACCCCT      6540
     TATGTCCACG GTGGAACCCG AAGTAAAGGG GGAAACGAAA TCCCTTCTTA ATCGGTGGCA      6600
     GCATTTGAAG GCTCTCCATC AGCAGTTCCG TGTGCGATGG AAAGAAGAGT ACCTCAAAGA      6660
     ACTCCACAAG CGTTCTAAAT GGCAGGTCCC GTGAACTTCG AGCTAAAATA CTCGTGCATG      6720
     TGGAGCAGCG TGTGGTGGGA TCGGTCGCAC TTCTTGCAAC GATCACCGCT TCGGCAGTCT      6780
     CCCGTGGAAT GCTCGTGAGC GAGGCAATTG GCGCTAGTAT GTTGGTAATG AGGACTGCTC      6840
     GCAAACGCTT TTCAGCGCTG AGCTTTAGGA ACCTCGCGCA CGTCCGAAGA GGATGGATTA      6900
     CCGCGGCAGA CTCGGCATCG GTAGGATTTA ATACCTCGGG TACGTCTGCT CTCCACGGCA      6960
     CGACCTGCGT GCGTTTTGTT GACGAGGAGC CATGTGCGCG TAGTCGAATG TCGAAAGGAG      7020
     ATCGAAAACG AAATGAAAAA TAACGGATGA TTAGTGATAG TGAACTACAA CTAAGGACGA      7080
     GAGGAGAGAC CTATTATTGT GGAGATTCGG AACTCCGTCG GCAAAAGCAC CTTTTTTGCC      7140
     ACTGGACGTT TAATAACTCC ACGTGCAGTA CGGATGTTTA CTACACGACG TTGCCGTCAG      7200
     CTCCTGGGAA AACAGACTCA ATTCTGCCGA GCCGCCACTC ATTAGAGGGC AAGTTGTCGT      7260
     CCTTGATGAC GACTGTTGAG TTACGGGGTT TGGACTGTCA CCGTCTCCGC TCCCTCTTAC      7320
     GTTCTCCACT CCCTCTTACG CTCTCCCGCT CTTCACCACA GAGTCTCCGA GGAGTCTCTG      7380
     GCGCTTGGGA GAACCCAACG CATTAGAATA AGTTTTAGTG TAAAACTAAC CACGATCAAT      7440
     AAAACATACG CCCGGTGCCC GCGCTAATTC TACAAGTCTT CGAGTGTTTT TTCGAGTGGT      7500
     CTTTTTTTCA GCAAACTAGG AACTTTCCAG GACCAGCACC CCCCATCACC CCAACAACGA      7560
     CCATGTCATC GATGGCGTCG CCAACCGGCG CCAACCCTGC AAGCAGCTTC GGCCTCGTCC      7620
     CAACGTTCCC GCCGGCACAA TCCGCCAACT CAGCGTAGGA GTTCACCGCC ACGACGACCG      7680
     GAATCGACGA CGCCAGGCCC ATCACTCTCG TCGCCGCTGC AACGCCACAG CGTGAACATC      7740
     CTTCCCACAG CGCTGGTCAA GATGGAGACC GGGACGAAGA CCTTCAGACC GCAGCACTCA      7800
     TCGATCCGTG CAGCCCCATG AGCTGCATCG ACGCTTCGTT GGCGTCAGCC TTTAAGCTTT      7860
     CGATGACCAA TGTTGGCGAC GAGAAGGTCT GCACGACGAC GATTCGCTCC AGGATCGACG      7920
     CGAACACGAA GCTCGAGGTC GTGCTCAAGA TCGAGCCCAG GGTGCGGATC CGTACACCTG      7980
     TCCGGGCATT GAGCGACACC GTAGTGTCCA AGTACAGGGA CATCATGCTG GCGGATGACG      8040
     GGTTCCATCG GCCTGCTACC GTATCCATGG TCTTAGGAGC AGACATTTAT CCTAAGGTTA      8100
     TCCAATCCGG ATTCCTGACC TTCGACGAGG GAATGCCGGT CGCTCAAAAG ACCGTGTTTG      8160
     GGTGGATCGT GTCCGGTGCC TGCAGCTTGC CTAGATGGCT ATGTTGCAAC CCCAGTGATT      8220
     GCAAGGGGGG CGGAATGTTC AAGTTACGCT CACCCGCTGT CACCCGCTGT CACCCGCTCT      8280
     CCGCTCCCTC TTACGCTCTC CCGCTCTTCA CCTCAGAGTC TCCAAGGAGT CCTCGGGCTT      8340
     GGGATAGCCT AACTAATTAG AATAAGCATC AGTGTAAAAA CTAACCACGC TGAATAAACA      8400
     TACGCCCGGT CGCCGCGCAA TTACGAAAAG TCTAGTGTTT GCTTTCCTTC GAGTGTTTCT      8460
     TTTCAGCATA TTTGAATTCA GGACAGCCAT CCCCCTACAT CCCAACA                    8507
//
ID   ROXELEMENT     standard; DNA; INV; 4740 BP.
XX
AC   AF237761;
XX
XX
DR   FLYBASE; FBgn0042231; X-element.
XX
SY   synonym: BS2
XX
FT   source          AF237761:1..4740
FT   SO_feature      CDS ; SO:0000316:322..1827
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0041613; X-element\ORF1"
FT                   /db_xref="SPTREMBL:Q9NBX5"
FT                   /protein_id="AAF81410.1"
FT                   /translation="MNTLNETAAADESLDTAFLSSPQCAAPQRFQKIKRKSRASPETER
FT                   KKPKSTIGKQGENPSATEPRYGGNSNRFGLLAHLTADKQVGNEIGDLYDQPSTSHQAAI
FT                   AAAKRDAASAGTTSSAKRAQSKPPPIVMEGVDDVYLMMQSIENIVDLEKIEARASMSGV
FT                   LRLYAADANTFRTIVNWLEIEEYEFHCYQLKEDRPYRVCVKGLHHSTLHHQIKDELEKI
FT                   GHKVLDIHTPLRRNEPGTSKASPVNMFFLNIAAAANNKEILAVKALCHMRVVIEPLRKR
FT                   NAIVQCHRCQQIGHTAKYCRKAHICVKCAGEHPAKDCTRPRIELCTCYNCGGQHPANYK
FT                   GCSKLQAFLQRSRPRSGVAGRTEVSDRPTPRGLAGGKEIPSSRGGISYADVARGSIHHK
FT                   QPMSLTHQQQKQKQQPYDGSPSRQRSRSRTRASRGTLQRSTDASSSIEAILQTLNENIN
FT                   SLRSIQEKQMELMMMMMKQQQQQSHQQGQIINLLTALQARQAP"
FT   SO_feature      CDS ; SO:0000316:1827..4553
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0041612; X-element\ORF2"
FT                   /db_xref="SPTREMBL:Q9NBX4"
FT                   /protein_id="AAF81411.1"
FT                   /translation="MMPLRILVWNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGAET
FT                   PKLFGFVAYTANDPSGGNAKGGAAILIKNSLAHFPLTPIATAKVQLAPAVIETALGPIS
FT                   FGAVYCPPRFAWTTDEFKDILEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLN
FT                   SEVDSLATGGPTRYPYGCRGSPGYIDFALTKGVLGIHANISAVVELSSDHLPLVITLDA
FT                   GAISYPKMERLITRRTNLEVFQSQLESTLPLNTAINSGQDVDDAIELLTNNIKSAARLA
FT                   TRSISRQPAADRIPIPREILLLIAEKRRLRTRWMRSRHPSDKTEWNRALSRLRCALVLH
FT                   KAAWFDERLANTGVESEATHSLWKATRAIKRRCTRKAPLVDSNGTWCRTDLGQAEVFAA
FT                   HLAERFQPFKLASLQQVEETQDQLNQALQMDMPITPFEPCEVAEVIVRQSNNKAPGHDV
FT                   ICNATLKALPRQAILYITLVFNAIVRLQYFPYQWKLGIISMIHKPGKPEREPASYRPIS
FT                   LLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTAYDSKE
FT                   YCNSLFLDIREAFDRVWHIGLQLKIKQTLPAPYFGLLKSYLEGRRFAVRFHSAISTEHN
FT                   VAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGI
FT                   QDFAYRFSEWARRWNIGINSSKSNNVCFTLKRRTPPPVYIEEVPVPQPNAAKYLGVLLD
FT                   RRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGL
FT                   ACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERH
FT                   RNRLASALNRSRPPRRLNRRQPRDLITRSPLTRVRRS"
XX
SQ   Sequence 4740 BP;  1336 A; 1215 C; 1183 G; 1006 T; 0 other;
     AATGTTAAAT AAAGGTTCGT GTCTAACAAT ACGCACCTGA CAAAGTGGAT TAAGTGAAAT        60
     TAGTTTTCGC GGTAATAAAC TTATGGACAA GACCAGAATA CTGGCACACA TAGCAAATAG       120
     TGACCCCCCA AGTCACTAAC AGTGAAATAA TAGTGAAACG AAAACATTTT CATTCAAAAA       180
     TACAAAGTTA AGTTTCTCGA ACTGGGGCTC CGCTGCCCAG CTGCCACGCG ATCGCACAAA       240
     CAGCTGTTTG CGAGCTTAAA GCTTTCTATC CCAGGGTTCA AGTTTTGGCT AGAACCCTGG       300
     TGATTTGGTG CACACTTCAA TATGAACACT TTAAATGAAA CCGCTGCGGC TGATGAATCG       360
     TTGGATACTG CGTTTCTCTC GAGCCCCCAA TGTGCTGCCC CGCAGCGCTT TCAAAAAATA       420
     AAGCGAAAGT CTCGTGCTTC TCCGGAGACT GAAAGGAAAA AACCCAAATC AACCATCGGC       480
     AAACAAGGGG AAAACCCTTC GGCTACAGAA CCTAGATATG GCGGCAATTC AAACCGATTT       540
     GGTTTACTTG CGCATCTCAC AGCTGACAAA CAAGTAGGCA ATGAAATTGG CGATCTGTAT       600
     GACCAGCCCA GTACCAGTCA TCAAGCTGCA ATTGCTGCCG CTAAGCGGGA TGCAGCCTCC       660
     GCTGGTACCA CTAGCTCAGC CAAAAGAGCG CAGTCCAAAC CACCTCCTAT AGTAATGGAG       720
     GGAGTGGACG ACGTATACCT GATGATGCAG AGCATCGAAA ATATAGTGGA CCTAGAAAAG       780
     ATTGAGGCTA GGGCGTCAAT GAGCGGTGTC CTAAGGCTTT ACGCGGCTGA CGCTAATACA       840
     TTTCGCACCA TAGTGAACTG GCTCGAGATC GAAGAGTATG AGTTCCACTG CTACCAGCTT       900
     AAAGAGGACA GGCCTTACAG GGTATGCGTG AAAGGCCTGC ACCACAGTAC GCTACATCAC       960
     CAAATCAAGG ATGAGCTGGA AAAGATCGGG CACAAGGTTC TCGATATTCA CACACCGCTT      1020
     AGGCGAAACG AACCGGGTAC CTCAAAAGCG TCGCCAGTCA ATATGTTCTT CCTAAATATT      1080
     GCTGCTGCGG CAAACAATAA GGAGATCCTG GCGGTAAAGG CACTATGCCA TATGAGAGTA      1140
     GTTATTGAGC CTCTCCGCAA GCGTAACGCT ATTGTCCAGT GCCATCGTTG TCAGCAGATT      1200
     GGCCACACAG CCAAATACTG CCGTAAGGCC CACATTTGTG TGAAATGTGC CGGCGAACAC      1260
     CCAGCCAAGG ACTGTACCAG GCCACGCATC GAGCTGTGCA CTTGCTACAA CTGTGGCGGC      1320
     CAGCATCCTG CAAACTATAA AGGTTGCAGC AAGCTACAAG CGTTCCTGCA GCGATCCAGA      1380
     CCCAGAAGTG GAGTGGCTGG AAGAACAGAA GTAAGCGATC GACCAACTCC ACGGGGCTTA      1440
     GCTGGAGGTA AGGAGATCCC CTCTTCTCGA GGCGGAATAT CTTATGCAGA TGTGGCTAGA      1500
     GGGTCCATTC ACCACAAGCA ACCAATGAGC CTGACGCACC AGCAACAGAA GCAAAAGCAA      1560
     CAGCCCTATG ATGGAAGCCC CAGTCGTCAA AGGAGCCGCA GCCGGACAAG GGCGTCTAGG      1620
     GGTACACTCC AGCGCTCGAC GGATGCTAGC AGCAGCATTG AAGCCATCCT GCAGACGCTT      1680
     AATGAGAACA TTAATTCTTT GCGCTCGATT CAAGAGAAGC AAATGGAATT AATGATGATG      1740
     ATGATGAAGC AACAGCAACA ACAGTCACAT CAGCAGGGGC AGATTATCAA TCTGCTCACT      1800
     GCTCTCCAAG CGCGTCAAGC GCCATAATGA TGCCGCTGCG CATCCTAGTG TGGAACGCCG      1860
     ACGGCGTATC CACGAAGTTG CCTGAAGTAG AGTGCTTCGT GCGACGTCAC GAAATCGATG      1920
     TATTACTGCT CAGCGAGACA CACTGCAAGG GGGCAGAGAC GCCTAAGCTA TTCGGATTTG      1980
     TAGCCTACAC TGCCAATGAT CCGAGTGGTG GCAACGCCAA AGGCGGAGCA GCTATCTTAA      2040
     TCAAAAATAG CCTTGCCCAC TTTCCGCTAA CACCAATAGC CACTGCCAAG GTGCAACTTG      2100
     CGCCGGCGGT TATTGAAACG GCACTTGGTC CTATAAGCTT TGGAGCGGTC TACTGCCCAC      2160
     CGAGATTTGC ATGGACTACG GACGAGTTTA AGGACATTTT GGAAGAGTTC CAGACGAAGT      2220
     TCATTGTTGC AGGCGATTGG AACGCGTCCC ACTGGCTCTG GGGTGCGGGA AGGAGCAACC      2280
     AAAGAGGCAT TGCATTAGCG AATCTCGTCC TAAATTCGGA GGTGGACTCG CTAGCAACAG      2340
     GAGGACCAAC AAGATACCCG TACGGCTGTA GAGGCTCACC AGGGTACATC GATTTTGCAC      2400
     TGACAAAGGG TGTGCTGGGC ATCCACGCTA ACATAAGTGC GGTTGTTGAG CTTAGCTCCG      2460
     ACCACCTGCC TCTGGTAATT ACGCTGGATG CGGGGGCAAT ATCCTACCCT AAGATGGAGC      2520
     GGCTTATCAC TAGGCGTACT AACCTGGAGG TATTCCAATC GCAACTGGAG TCCACACTGC      2580
     CCCTCAACAC TGCCATAAAC TCTGGACAGG ACGTTGATGA TGCTATCGAA CTGCTCACCA      2640
     ACAATATCAA GTCAGCAGCT AGATTGGCAA CTCGCAGCAT ATCTCGGCAG CCCGCGGCAG      2700
     ATCGAATCCC AATACCCAGG GAGATCCTGC TGCTTATAGC TGAGAAGAGG CGCTTACGCA      2760
     CTAGGTGGAT GAGGTCTCGG CACCCGTCGG ACAAAACGGA ATGGAACCGA GCTCTGAGTA      2820
     GGCTCCGATG CGCGTTGGTG CTGCACAAAG CCGCATGGTT CGACGAAAGG CTTGCCAATA      2880
     CCGGAGTCGA AAGCGAAGCG ACGCATTCGC TGTGGAAGGC CACGCGCGCA ATCAAAAGGC      2940
     GTTGCACGAG GAAGGCGCCT CTAGTCGATA GCAACGGGAC ATGGTGTCGG ACCGACTTGG      3000
     GACAAGCGGA GGTATTCGCT GCGCACCTCG CCGAGCGATT TCAACCATTC AAGCTTGCCA      3060
     GCCTGCAACA GGTTGAAGAA ACTCAGGACC AGCTGAACCA AGCGCTTCAA ATGGATATGC      3120
     CAATCACGCC GTTTGAACCC TGCGAGGTAG CCGAAGTCAT TGTGCGCCAG AGTAACAACA      3180
     AAGCACCTGG ACATGACGTC ATCTGCAACG CCACATTGAA GGCCCTGCCC AGACAAGCGA      3240
     TCCTCTACAT AACGTTGGTT TTCAACGCTA TTGTGAGGTT GCAATACTTC CCTTATCAGT      3300
     GGAAGCTCGG GATAATCTCC ATGATCCACA AACCTGGCAA GCCGGAAAGG GAGCCCGCCT      3360
     CCTACCGGCC GATCAGTCTC CTCCCTTCAA TTTCGAAGGT GTTTGAGAGA CTGATTGCTG      3420
     TCCGGATTGT AAGCATTATG GAAGCCCAGG GGATTACCCC TGAGCACCAG TTCGGTTTCC      3480
     GTGCTGGCCA CTGTACTGTC GAGCAGCTCC ATCGAGTCGT CGAGCAAATT CTGACTGCCT      3540
     ACGACAGTAA GGAATATTGT AACAGCCTCT TCTTGGACAT TCGAGAAGCG TTTGATCGAG      3600
     TGTGGCACAT TGGACTCCAA CTGAAAATCA AGCAGACGCT GCCTGCCCCA TATTTTGGGT      3660
     TGCTGAAATC GTACCTGGAA GGAAGGAGGT TCGCTGTGCG CTTTCATTCA GCAATTTCCA      3720
     CCGAGCACAA CGTGGCAGCT GGTGTTCCAC AAGGTAGTGT CCTCGGCCCC CTGCTCTACT      3780
     GCCTGTATAG CCACGACATG CCGCAGCCAG ATGTAAGCCT TTACGGGAAA TCTATGTTGG      3840
     CCACATTTGC CGATGACGTG TGCGTCACCT ACAGGTCCCG ATGCGAGCAC GACGCAGCCG      3900
     ATGGTATCCA GGACTTTGCA TACCGGTTCT CGGAATGGGC AAGACGATGG AATATTGGCA      3960
     TCAATAGCAG TAAATCCAAC AACGTCTGCT TCACTTTAAA GCGGAGAACG CCACCGCCCG      4020
     TCTACATCGA GGAAGTCCCC GTACCACAGC CGAACGCAGC AAAGTACCTT GGAGTGCTTC      4080
     TGGATCGCAG ACTCACATTT TCCAAGCATG TGACCGACAT CAGAACGCGC CTACGTGCTA      4140
     AGGTGGCGAA GCACTACTGG CTACTTTCTT CGCGCAGTAA ATTGTCGCTA TCCAACAAGC      4200
     TGACAATTTA CAAACAGATC CTAGCACCAA ACTGGAAGTA TGGGTGCCAA ATCTGGGGCT      4260
     TAGCCTGCGA CAGCCACATC AAAAGGATCC AGGCTATTCA AAATAAGGTA GCAAGACTCA      4320
     TCACCGGCTG CGAGTGGTTT GTTCGAAACA CCACCCTGCA CAGAGACCTG AAACTCGCAA      4380
     CGGTATTTGA CGAAATAAAC AAGCACTCGA GCAGATACCA TGACAGGCTG GAGCGCCACA      4440
     GAAATCGGCT GGCCAGCGCT TTAAACAGAT CTCGCCCACC AAGGAGGCTC AATAGAAGGC      4500
     AACCGAGGGA TCTCATTACC CGATCTCCTT TGACAAGGGT CCGCAGAAGC TGACGCTTAT      4560
     CTTAAATCCT ATTTGTTATA TGTGATTGTT ATGTAATTGT AGTTAAATTA CTGTAAATTT      4620
     GAAAAAGCTA ACTATAGTTA GCCGGCGAGC CCAAATGGGC TGAATTAATA GATAAGAAGG      4680
     ACACAAAGGG GCTTCAAGAC TTCCCCGTAT GCCTTAATAA ATAAATTAAA TAAAAAAAAA      4740
//
ID   AF222049   standard; DNA; INV; 5249 BP.
XX
AC   AF222049;
XX
DR   FLYBASE; FBgn0040267; Transpac.
XX
FT   source          AF222049:1..5249
FT   SO_feature      five_prime_LTR ; SO:0000425:1..330
FT   SO_feature      three_prime_LTR ; SO:0000426:4920..5249
FT   SO_feature      CDS ; SO:0000316:668..1603
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0040266; Transpac\gag"
FT                   /db_xref="SPTREMBL:Q9NHF8"
FT                   /protein_id="AAF36670.1"
FT                   /translation="MNENSLAAFNSTMNCIKLIQNFDGTDTNQLPDLITQIENILPSFD
FT                   VFDTNTKNILFGFIKNKFVGLCRPVIHRHGNMTEWESFKRVILKNFGEKETSDVLMDML
FT                   KLCRVESTIEEYYNKINEISNRVHNRILIHDDKTYTTLEVNRIALRVFRDNLPEPTKTL
FT                   IFARNPNSVEDAYKIIEDARHQSYTLYGPIRRNNRYNKPNFRTNFSNDNRNVNEPVVTE
FT                   RSLDEANRFQQNNVEQQENSRTEGTPRVNNRRQGYQYQSNNSSTSNSARVSTNSRNVQS
FT                   SEQSRRSFEPMDINQSSVNFQIEDQDEYHI"
FT   SO_feature      CDS ; SO:0000316:1726..4839
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0040265; Transpac\pol"
FT                   /db_xref="SPTREMBL:Q9NHF7"
FT                   /protein_id="AAF36671.1"
FT                   /translation="MGNKIKIRKLCRFPCFQEFEAEGYICEFLEYNFHNYFDGLIGCNI
FT                   LNDLHAVIDYSNKKIQLNNVYLDLLVQENHLDLGIHNLIPMNLICPQARSSINELIQKF
FT                   EHIFYKEGQDLSFTSEIKHRIITKNDLPIYSKTYKYPEIHKDEVNRQIAEMLDQGIIRH
FT                   SKSPYNSPLWVVQKKMDQSNKQKWRLVVDYRKLNKETIEDRFPIPNIDEIFDKLGDCKI
FT                   FSTLDLAKGFYQIEMDNKDVHKTAFSTTSGHYEFLRMPFGLRNAPSTFQRLMNNILSPY
FT                   TGQFCIVYMDDILIFSKNIGEHVNHLSCIFSCLSKANLKLQSDKCEFAREEIEFLGHTI
FT                   NSEGLKPSQKKIDAICKINLPTNQKQIKSFLGITGYLRRYIKDYSKIAQPLIKYLKKNS
FT                   KINTHDQXYVEAFQKLKILITSDPIVVYPDFNKQFTIVTDASNYALGAVLMQDNKVISY
FT                   ASRSLKNHELNYSTIEKELLAIYWSTKFFKYYIYGRKFIIKTDHRPLVWLNNLKEPNLK
FT                   LQRWKVQLNEFDFDITFIKGKENALADGLSRIVKASTEEYDKNAQTNIEINNLDIFMLE
FT                   NTNTLPEVTPKTKIINEDFSKDLIHIFANDIDDLETIHSADSDDLNFISITTNCLNVFK
FT                   IQIQIIEAESDLSTFKILHNKKIRHIFKSSGNQENMLKFMQEKLPEKGLVVIFCENLSL
FT                   FVKFQEIYRQYFSSNKNLRILKSGTLLEDINDKEKLLKIIENEHIKNNHRGINEIFISI
FT                   REKYYYPKMQKFIQNYINNCKICNLAKYDRQPIKYNFNITETPDKINDIIHIDIWYPKR
FT                   NIMYVTSIDKMSKYATAQHIKDRSWISLLNAIKLRIQYLGKPKKIVTDNEFDIVVIKQF
FT                   LLENNIDIHFTTPYKKTGNSDVERLHLTLNEHMRLYNADPNNFDTIQENVYKAIVCYNN
FT                   TIHSTTNIRPIDLFNNILCHEDISKLSEKLVRNKQTLNAKQDNINESNFSNIFVKNNQV
FT                   GKSNPKYKEISNYTQYGNYLINNKDNKRKIYKDQVKRKYKYQNEDCET"
XX
CC   Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1).
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 5249 BP; 2045 A; 905 C; 832 G; 1461 T; 6 other;
     AGTCATGTAT ACCCTTACAT ACCCTCTTAT TAGATTAAGT TATGTTAGAA TACACATGGC        60
     GCTAAGCTTT TTGTCTGAGC TTAGCTTTAT TTTTAGTCAG TAGATAAGAA GACCTCGATC       120
     TGTACACATC ATTGAATAAA CCCTCAATTT GTTAAGCGAA ACCTTTCGTT TTGTTTTAAC       180
     CCCTCTTTAA TCGACAAAGA AGTCGATGGG TGCTTAACTG AGGAGTTCAA CCTTCAACCT       240
     ACAGACGACA ACGAAGTCGT TTCTGGAGGC AACGATCTTT TGGACACAAC GGTCTCTGCT       300
     CGGAAGGCCC TATCAACCTT CCACATAACT GGCGACGAGG ATCAACACAG AAAAAATAAG       360
     GAAACCAGCC ATACGTCAAG AAATTCATTC NGAACCACAG TNAGCTGNTN TTATGTAATT       420
     TAAGTCCGGA AATCTTCAAT ACGTTAACCA ATGCACGTGG CCGAGTATAA AGAGGAACAT       480
     AAAACATAAC TGGAAAGCTT TGGAACACCT GCATGTACGG AGTGACGAAA CCCAACCTGG       540
     AGAAGAAGAA CTTAAGCTGA TAAAATTTTT TTTTTCTTCG ACAAAGCTCT TTATACTAGC       600
     TAAGATAAGA AACTAAAAGC TAACTATTAA TACTTGCGAA CCTCGAGAGA AAACAAAGAA       660
     ATCTAAAATG AACGAAAATA GCTTAGCCGC ATTTAACTCA ACAATGAACT GCATCAAGTT       720
     AATACAAAAT TTTGATGGTA CTGATACAAA TCAATTGCCA GATTTAATTA CACAAATAGA       780
     AAATATCCTT CCTTCTTTTG ATGTTTTCGA CACGAATACA AAAAATATTT TGTTTGGCTT       840
     TATAAAAAAT AAATTTGTGG GATTATGCAG GCCAGTGATT CATAGGCATG GAAATATGAC       900
     AGAGTGGGAA AGTTTTAAAC GTGTAATTCT GAAAAATTTC GGGGAAAAAG AAACAAGCGA       960
     TGTCTTAATG GATATGTTAA AATTGTGTCG AGTGGAATCA ACTATAGAAG AATATTATAA      1020
     CAAAATTAAT GAAATTTCGA ATAGGGTACA CAACCGGATA CTGATCCATG ACGACAAAAC      1080
     ATACACCACA TTAGAAGTGA ACCGAATTGC ACTCCGCGTT TTTAGAGACA ACTTGCCTGA      1140
     ACCTACAAAA ACGTTAATAT TCGCGAGAAA CCCAAATTCC GTAGAGGATG CCTATAAAAT      1200
     CATTGAAGAT GCTCGGCATC AAAGCTACAC ATTATACGGA CCAATTCGAA GAAATAATAG      1260
     GTACAATAAA CCCAACTTCA GAACCAATTT CAGTAATGAT AATAGAAATG TAAACGAACC      1320
     AGTCGTTACA GAAAGAAGCC TTGATGAAGC CAATAGGTTT CAACAAAATA ATGTTGAACA      1380
     ACAAGAAAAT TCAAGAACTG AAGGTACGCC TAGGGTAAAT AATAGAAGGC AGGGATATCA      1440
     ATATCAATCG AATAATAGCT CAACTTCTAA TTCTGCTCGA GTCTCAACAA ATAGTCGAAA      1500
     TGTGCAAAGC TCTGAGCAAA GCAGGCGTAG TTTCGAGCCA ATGGATATTA ATCAATCAAG      1560
     TGTAAATTTT CAGATAGAGG ATCAAGACGA ATACCATATA TAGAAGTTCA AGGTAAAAAG      1620
     AGGCCATTAT TATTTATTAT TGACACTGGA GCAGAATTCA GTGTAATAAA TGATAATTTG      1680
     TGTCACCCGA AGTGGAAAAC AGACATTGAC ATAGAAGTAA AAGCAATGGG AAACAAAATT      1740
     AAAATAAGAA AATTATGCAG GTTTCCATGT TTTCAAGAAT TTGAAGCTGA AGGTTATATT      1800
     TGTGAATTTC TAGAGTATAA TTTTCACAAC TATTTCGATG GGCTAATTGG CTGTAACATA      1860
     CTTAATGACT TGCATGCAGT CATCGATTAC TCAAACAAAA AGATTCAACT CAATAATGTT      1920
     TATTTAGATC TTTTAGTTCA GGAAAACCAC TTGGATCTTG GCATACATAA CTTAATTCCA      1980
     ATGAACTTAA TTTGTCCACA GGCCAGATCC TCAATAAATG AGCTTATACA AAAATTCGAA      2040
     CATATTTTTT ACAAAGAAGG CCAAGACCTA AGTTTCACAA GTGAAATCAA ACACAGGATT      2100
     ATTACAAAGA ATGATCTTCC CATTTATTCG AAAACATACA AATACCCAGA AATTCACAAA      2160
     GACGAAGTTA ACCGGCAAAT AGCAGAAATG TTAGATCAAG GAATTATAAG ACACTCTAAA      2220
     AGCCCATATA ATAGTCCTTT GTGGGTTGTT CAGAAAAAAA TGGACCAGTC CAATAAGCAA      2280
     AAGTGGCGGC TCGTCGTAGA CTACCGTAAA CTTAATAAGG AAACCATTGA AGATCGATTC      2340
     CCGATCCCAA ATATAGACGA GATTTTCGAC AAATTGGGCG ACTGTAAAAT TTTTTCAACT      2400
     TTAGACCTTG CAAAAGGTTT CTATCAGATA GAAATGGACA ACAAAGATGT GCACAAAACA      2460
     GCCTTTTCAA CAACCAGTGG CCATTACGAG TTCCTTCGTA TGCCTTTCGG ACTACGGAAC      2520
     GCACCTTCAA CATTTCAAAG GCTAATGAAT AATATCCTTA GCCCCTATAC CGGACAATTT      2580
     TGCATTGTTT ACATGGATGA CATCCTTATA TTTTCTAAGA ATATAGGGGA ACACGTCAAT      2640
     CATTTAAGCT GTATCTTCAG CTGTCTATCT AAGGCAAATT TAAAACTCCA ATCAGACAAA      2700
     TGCGAGTTTG CCAGAGAGGA GATTGAATTT CTCGGACATA CCATTAATTC AGAAGGTCTA      2760
     AAGCCAAGTC AGAAGAAAAT TGACGCAATT TGTAAGATAA ATTTACCGAC AAACCAGAAA      2820
     CAAATTAAAA GTTTTCTAGG CATCACAGGT TATTTGAGGC GCTACATAAA AGACTACTCC      2880
     AAAATTGCCC AGCCCTTAAT AAAATACTTA AAGAAAAATT CTAAAATAAA CACACATGAT      2940
     CAANAATACG TAGAAGCTTT TCAAAAACTA AAAATCCTAA TAACAAGCGA TCCGATAGTC      3000
     GTTTACCCAG ATTTTAACAA ACAATTCACG ATAGTTACAG ACGCAAGTAA CTATGCATTA      3060
     GGCGCCGTGC TCATGCAAGA TAATAAAGTA ATTTCTTATG CTAGTCGTTC TCTTAAAAAT      3120
     CATGAACTTA ATTACAGTAC AATAGAAAAA GAGCTTCTTG CAATCTATTG GTCAACAAAA      3180
     TTCTTTAAAT ATTATATTTA TGGAAGAAAG TTTATAATTA AAACCGACCA TAGACCCCTA      3240
     GTTTGGCTTA ATAATCTAAA GGAACCCAAC CTAAAGTTAC AACGTTGGAA AGTGCAATTA      3300
     AACGAGTTTG ATTTTGACAT AACATTTATA AAAGGTAAAG AAAACGCTTT AGCAGACGGA      3360
     CTTAGCAGAA TTGTCAAAGC ATCAACAGAA GAGTATGATA AAAATGCCCA AACAAATATA      3420
     GAAATTAATA ACTTAGATAT ATTTATGCTA GAGAACACTA ACACATTACC GGAAGTTACG      3480
     CCTAAGACAA AAATTATAAA TGAAGATTTC TCGAAAGATC TAATTCATAT ATTTGCCAAC      3540
     GATATTGACG ATTTGGAAAC TATTCACAGT GCGGACTCAG ACGATCTTAA TTTTATTAGT      3600
     ATTACAACTA ATTGTCTAAA CGTTTTTAAA ATCCAAATAC AAATAATAGA AGCGGAAAGC      3660
     GATTTAAGTA CCTTCAAAAT TTTGCATAAC AAGAAAATAC GACATATCTT TAAATCAAGC      3720
     GGAAATCAGG AAAATATGCT TAAGTTCATG CAAGAGAAAC TGCCAGAAAA AGGCTTAGTT      3780
     GTAATATTTT GTGAAAATTT AAGTTTATTT GTAAAATTTC AAGAAATTTA TAGGCAGTAT      3840
     TTTTCAAGTA ATAAAAATTT AAGAATTCTA AAGTCAGGTA CATTGTTAGA AGACATAAAT      3900
     GATAAAGAAA AACTCCTGAA GATTATCGAA AACGAACACA TAAAGAATAA TCACAGAGGC      3960
     ATTAACGAAA TTTTTATATC TATAAGAGAA AAATACTATT ATCCAAAAAT GCAAAAGTTT      4020
     ATTCAAAATT ATATTAACAA TTGTAAAATT TGTAATTTAG CCAAATATGA TAGACAACCT      4080
     ATAAAATATA ATTTTAATAT TACAGAAACG CCAGATAAAA TAAACGATAT AATTCACATA      4140
     GACATCTGGT ATCCTAAAAG AAACATTATG TACGTTACAT CAATTGACAA AATGTCTAAA      4200
     TATGCCACTG CTCAACATAT TAAAGACAGA TCTTGGATTT CTTTGCTTAA CGCAATCAAA      4260
     TTAAGAATTC AATACTTAGG AAAGCCTAAA AAGATTGTAA CTGATAACGA ATTCGATATT      4320
     GTCGTAATTA AGCAATTTCT CCTCGAAAAT AACATAGATA TACACTTTAC AACTCCTTAT      4380
     AAGAAAACTG GAAACTCTGA TGTGGAAAGA TTGCACTTAA CCCTAAATGA ACATATGCGA      4440
     TTGTATAATG CTGATCCAAA CAATTTTGAC ACTATTCAAG AAAATGTTTA TAAAGCAATT      4500
     GTTTGCTATA ATAACACAAT TCATTCAACC ACAAATATTA GACCGATAGA TTTATTTAAT      4560
     AATATACTTT GTCACGAAGA CATCTCTAAA CTATCCGAAA AGCTAGTAAG AAACAAACAA      4620
     ACTTTAAATG CAAAACAGGA TAACATAAAC GAGTCAAACT TCTCAAATAT ATTTGTAAAA      4680
     AATAATCAAG TAGGAAAATC AAATCCAAAA TATAAAGAAA TAAGTAATTA CACTCAATAC      4740
     GGTAACTACT TGATTAATAA TAAAGACAAT AAACGAAAAA TCTATAAGGA TCAGGTGAAA      4800
     CGGAAATATA AATATCAAAA TGAAGATTGT GAAACCTAAC ATTTCTGTAC TCCTATTATT      4860
     TACATATGTA TTACCTAATG AAATAATTTC AACCACATAC TTGAAACTTA NGCTGGGGGA      4920
     GTCATGTATA CCCTTACATA CCCTCTTATT AGATTAAGTT ATGTTAGAAT ACACATGGCG      4980
     CTAAGCTTTT TGTCTGAGCT TAGCTTTATT TTTAGTCAGT AGATAAGAAG ACCTCGATCT      5040
     GTACACATCA TTGAATAAAC CCTCAATTTG TTAAGCGAAA CCTTTCGTTT TGTTTTAACC      5100
     CCTCTTTAAT CGACAAAGAA GTCGATGGGT GCTTAACTGA GGAGTTCAAC CTTCAACCTA      5160
     CAGACGACAA CGAAGTCGTT TCTGGAGGCA ACGATCTTTT GGACACAACG GTCTCTGCTC      5220
     GGAAGGCCCT ATCAACCTTC CACATAACT                                        5249
//
ID   CIRC   standard; DNA; INV; 7450 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0022937; Circe.
XX
FT   source          nnnnnnnn:1..7450
FT   SO_feature      five_prime_LTR ; SO:0000425:1..240
FT   SO_feature      three_prime_LTR ; SO:0000426:7211..7450
XX
CC   Sequence from A. Villesante, 20-March-2004.
CC   Consensus sequence.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7450 BP; 2217 A; 1543 C; 1441 G; 2249 T; 0 other;
     ATAGAATAAG GCCAATAACA TCTGGGCCTC ATCTTCAATA GGTACACTTT TTTGTCCGCT        60
     TCTTAACCGT TTGGTTATCG TTTTTTTTTT AATCTACCGT ATCTCTGTCT ACAGTATTGT       120
     AGCTGTGACA CTCTTGTTCA TCTCAACACA AAACCCACGC CCATTTTCCC TGAGTATGCC       180
     GGTAAAAATA GTAGACAGAG TGTGTTGGGG TGGACAACGC TCTATGAGTG TGTTCGTTAG       240
     AGTTATAATT GGCGCCCAAA CGTGGGACAG CCCGATGCCT GATTAGGCAC TTGTCGTTTG       300
     ACAACCGAGC TTCCCGTTAA TAAACAATCC ATCCACTCTT AGTTTCAGTT AGGTATTTCA       360
     TATTCCGTCC TGGAATTTAT GATATCTGGA GAGTCCCGGA GCCATACCGG AGGAAATGTT       420
     ATGCTTTTAT ATGTTTTTTT TTTCTATCAG TTCGGTAATA ATCGAACATT ATTGTTAAAA       480
     AAAAGAACAT TCTAATTTGA GTAATTGGTT CTTAGGAATT ATAGTTCTGA TTTAAAGTCG       540
     GTTCTATACC AGGATTTCAC TATTCAAAAA TTACCTCCTT ATCATTTAGG ATCGAGATTT       600
     TTTCTAGCTG GATAGATTCG GCTAGTTACT CTTCTAAGTG GTAGGAGTTC ATAAATAAAT       660
     AAATGGCATT TATTTTACAA CTCTGTATGC ACACCCCGTT AGCTTTTCGT AGCTATTGAA       720
     TTATACAACC TACTGCTTTG CTACTCAGGG TAAGACCCGC AGGTATTATT TTGGCGCGTT       780
     AACTTTTATC TTTTTGTCGC TTAGCGTTGA TCGTTGGATC TTAGCGCGTA CACATTATCT       840
     TTTTTCGCTT ATCTTTGATC GTTGGATCTT ACCGCTTATT TTTCTTGTTC TAACGAGAGG       900
     AATTGTTAGA CTTGTTAGAC TTGTTAGACT TTATATATTC TTCTAGAAGC TTCGAAAATG       960
     ATGATGCGAA GTAATGAAAA TTTAGTTGAC GTAGATACGG ATGCGTCGGT GACATGCACC      1020
     ATCTGCAACT GGCCAGTACG TAATCTGGAT TTGGTTAAAA CCCGTCGTAA ACATTCTTTT      1080
     CACAAACATT GCCTTGACAA TTACCTTAAG AACCATGACA AATGCCCCAT ATGTGGCCAG      1140
     CCATGTTCTC AATCCGAGTT AGGATCTCAT TTGCCTTTGT CAACTAAATC TCAAGGTAAC      1200
     AGGATGATGA CCCGTTCAGG TTCTCGGAAT ACAGCCAAAC AACATTAGAA GTCTGATCCA      1260
     AATTCCCAAC AGGAAATTTG TAGCGGGGAT AGTTCAGATT CCAGAGTTGT GACAGAAGAC      1320
     CGTGTTCAGC AAATAGTCCA AAGTTCAATG CAGGCCTTTC AAGCAAGCAT GCTACAATCA      1380
     GTGCCAGAAC AAATCACTAC GGCGTTCACT CAATTGAATA AATCCACATT TGTAAATAAT      1440
     GGACAGAGTG AGCTGCAGCA AGACATACAA AATAATTTCG GTCGAGACGC TCCCGAAATA      1500
     AACTCAGAAA GAAATAACAA CTCACATGTT AGGACTTCAC CAGACTTTCG TAGCGATCGA      1560
     AGTGATCTTT CTTTGGATAG ACCTGATAGG ATTTCCAATA TTATATCAAA TTGGCGTATT      1620
     AAATTCAGCG GTTCAGCCAA CGACATTGCC ATTGAGGATT TTATTTACCG CGTAAATTGT      1680
     CTCACTTCGC AAAGCCTGAA CGGAAACTTC GAACTTCTTT CCCATTTCAC TAATTTACTG      1740
     TTTGCAGGAC CGGCCTTAGC ATTTTATTGG CGTGTTCAAA GATCGGTGGA TAACATGAAT      1800
     TTGAACGTGT TATGCAGGCG TTTAAGGGAA AGATATCAAG ATCAGAGATC TGATCGTGAA      1860
     ATTAAAATTG CTATGCGTCG CCGCAAAGAG GGTAGCACAG AAAATTTTGA TGATTTTTTG      1920
     GATGCAATGC TTTCCATTGC AGATTCCCTT AGTGAACCAA TGCAGGACAG TGAGATTACT      1980
     GTAGAAGTTC GTCATAATCT CAAACCGGAG ATCAAGCACG AATTACTGCA CATAGACACC      2040
     CCAAACTTAG CAATATTGCG TAAGGAATGT CATCGTCACG AAGATTTCTT TCGAAGCACT      2100
     CGGACAAAGC CAATCCAACG TCCGAACACA AGCAAGCGTT TTGTTAACGC AATCCTGCAT      2160
     GAAGATGATT CCGAAGATCA GTCTGAGGAA GAACAGGATG TCGAGGACGA GATTTGTGTC      2220
     GTTAGGACTT CTGAGAAAAT TAAGTGCTGG AACTGCGATG AATCAGGTCA CGGTTACCAG      2280
     AATTGCCTTA AGACACGCCG TATTTTTTGT TATGGTTGCG GAACTCCGGA GGTGTATAAA      2340
     CCCAACTGCG CAAAATGTAA ATCGACATCG GAAAACTCTC AGCAGGGCAT TCGTTATGCG      2400
     AACAAAACGA ATGTCCGCGT TAGCCTCGAA AATACAAACT GAACCAAATT CTGTGGCAAA      2460
     TGATGTTCAT TCCATTCTGC CCTCAACTCA ACCTGACGTA ACATTATCCC AAACTTTTAA      2520
     TCCATATCAT TTGCAAGTGC TGGAGTATGC AAATCGTAAA TTGCAAATAT TTAGGGAAAA      2580
     TTCACTTCAT AATCGAAAAC ACCGATCATC ACGGCGAATT CGTAAAATTT GGATTCGTAA      2640
     ACGATCATTC AACCGTTTTA CGATTTCATC AATTGTTCAA AATAAGAACG ATATTCGACC      2700
     TTTCACACAC ATTGACATAT TTGGTCAATC GCATTTAGCT CTCCTAGACA GTGGCGCCAA      2760
     CAAAAGTGTT ATAGGTGGTG AGCTAGCACA ACAATTAATA TCAAGCAAGC CATTTAATAA      2820
     ATTTAAATCG GTTGTGCGAA CTGCTGATGG CCAAACGCAA AATGTTGCAG GCACTATACA      2880
     AATTCCCTTG ACTTACAACT CAGTTGATAA TAACTTCGAA TTCTTAATAG TCCCTTCCAT      2940
     AAAGCAAAGC GTAATATGCG GAATGGATTT CTGGTATACG TTTGGAATTT CTATTAAGCA      3000
     AACAGTTTTG ATCAACGAAA TCAACTTTGA ACCCGAAGAA GACTCTACTC GCGTACGATT      3060
     GTCTGATTCA CAAAAATTAA AATTGCAGAA AGTAATAGAC TTTTTCCCAT CGTTCGAGAA      3120
     TGAGGGCTTA GGATTGACTA ACCTGATAGA GCACAATATC GATACATCCA ATGCGAAACC      3180
     AATCAAACAA CGATTTTATC CACTTTCGCC TGCTAAAGAA AAACTTTTGT GTATAGAAAT      3240
     CGATCGCATG ATTAAGATGG ATGTCATTGA AGAGGCACCT TCATCGCCTT GGTCATCTCC      3300
     AGTTACAATG CATATCAAAC CAGGCAAGGT GCGATTTTGT CTCGATGCAA GAAAATTAAA      3360
     TGCAGTCACC GTAAAGGACG CATACCCAAT CCCAATTATG GATGGACTGC TAAGTCGTCT      3420
     TTCACCGGTA CATTGCATTT CCAAAATTGA CCTCAAAGAT GCCTTTTGGC AGATCTATTT      3480
     AGATCAAGAA TCCCGTGCCA AGACTGCTTT CACCGTTCCA AATAGGCCCC TTTATCAGTT      3540
     CAAGAGAATG CCTTTTGGAT TGTCAAACGC TCCACAAACC ATGTGCCGTT TGATGCACCT      3600
     CGTTATACCC TATCAATTAA AATCGCATGT ATTAGTCTAC CTCGACGATT TGCTGGTTTT      3660
     GTCAAACAAT TTCGAAGACC ATCTTTTGCA TTTGTCCGAA GTAGCCACCC AATTGCGTAA      3720
     AGCTGGATTG ACAATTAATG TCCAGAAAAG TCAGTTCTGC CTGAAAACAG TAGACTATCT      3780
     CGGTTACCTG GTGGGCGAAG GCACACTACA AGTAAATCCG AACAAAATCG CTGCTGTGAG      3840
     AGACTTTCCA GTTCCAAAGA CCCAAAAACA ACTAAGGCGG TTTCTTGGTA TGACTGGTTG      3900
     GTACCAGCGA TTCATATCTA ATTACTCCAC ATTCATTTTC AATCTTACAG AGTTGTTACG      3960
     TGGCAAATCC TTCAGTTGGA ACGATGTTGC TCAAGAAGCT TTTGATAATA TCAAAGACAA      4020
     GTTATGCTCT GCTCCTTATC TCATTCACCC CAATTATGAC AAACCATTTA TCCTGCAGTG      4080
     TGATGCTTCA CTACATGGAG TGGGTGCAGT TCTAGCTCAA TGTGATGATT CCGGTTGTGA      4140
     ACGTCCGATA GCATTCATGT CTAAGAAGCT GAATAAAGCC CAACGTAACT ATACAGTTAC      4200
     AGAACTCGAA TGCATGGCTG TAGTTCTGGC AATTAAGAAG TTCAGAATGT ACATCGACGG      4260
     TCATAGCTTC AAAGTAGTCA CCGACCACTC AAGTCTTCGA TGGCTAATGA ACCAATCAGA      4320
     TTTAAGCGGG AGATTGGCAA GATGGGCTAT CAAACTTCAG GGTTATTCCT TCGAAATCGA      4380
     GCATTGCAAG GGAACAGAAA ATGTGGTTGC GGACGCTTTG TCTCGATCGG TTCGAGGATG      4440
     TTGACGATAT TGCCGCAGTA GACCCTTGAA GTCCATTCCC GAATTGATTT ATCTTCCAGT      4500
     GCATTTCCAT CGGAAAAGTA TTCTGCTCTC AGAGATAAAT TAGTGTCTCA AAAATTACCT      4560
     GATTTTCAAG TCAGTGATGA CTATATTTAT CATCGGGCAA CATTCCCCAA TTGTACTGAC      4620
     GTTTCACCAG ACGATTGCTG GAAATTGCTT GTACCTGAGT CGTTGCGTCA TAGCGTAATG      4680
     AGTTCGGCTC ATGATCAACC AACATCTGCA CATTGTGGAA TGGCTAAATG CTTAGAGCGT      4740
     ATTAGACGGC GTTTTTACTG GCCAAACATG GTTATCAACG TTCGTGATTA CATTCGAAAT      4800
     TGCGAGACGT GTCAGACCAC TAAATATCTC AATCGCTCTA AAAAACCACC AATGGCAGCA      4860
     CAAGTGCAAA GCGATACAAT TTTTCAAAGA CTTTATCTTG TTTTTTTCGG CCCATTTCCC      4920
     AGATCGAAAT CCGGCAACAT TGGTATACTT ATTATTCTGG ATAACTTTTC CAAATTTACC      4980
     TTTTTAAAAG CTGTGAGAAA GTTCAACACT AAAGTGATCA TCAGTATATT GCGGGATGAA      5040
     ATATTTGCAT GCTTCGGTGT ACCCGAAACA GTCGTGAGTG ACAACGGAAC TCAATTTAAA      5100
     AGCCGTGATT TCTCTGACTT TCTTTCGAAA TATGGCGTCC TTCATATATT TACTGGTGCA      5160
     TATGCTCCAC AATCCAACGG AGCTGAGAGA GTTAACCGTT CTATAAACGC TGCTTTAAGA      5220
     GCTTACATTC GCTCTGACCA TCGCGAATTG GACGTGTTCC TCAGTAGCAT CAACTGTTCT      5280
     CTTCGTAACT CGATTCACCA ATCTATTGGT ATATCGCCTT ATCAGGTTGT TTTCGGTAAA      5340
     CACATGATAT CCCATGGTAA TGACTACAAA CTGTTGCGCA AACTTAATTT ACTCACAGAA      5400
     GGTGACGTAA AATTATCCAG AACTGACGAA TTTCAAAGAA TTCGCTCCAA CATTGCCAGA      5460
     CATTTGAATA AGGCTTATGA GACAAACCAA AAGTCTTACA ATCTCCGAGC ACGACCCCGA      5520
     TCTTTCGATC TTCTGAGGTC AAGAAGTTGT TAAAAGAAAT TTCGTTCTAA GTAATGCAGC      5580
     GAATAATTTT AACGCGAAAC TCGCTCCTGT CGGTGTTAAG GCCGGAGTCA AAGAAAGGAT      5640
     TGGTCAATCA ATATATCTCT TAGAGGACAT GAACGGCAAG GAAATTGGTA GATTTCATGC      5700
     CAAGGACATT TGGTAATTGC TTTTGACTCC TTTTTAAGTT TTTATTGTTA GTCACAGCGA      5760
     CTAAAAATCA AATCTGTGGT TGTGGGAGTC GAGCCAAATG GCAACCTTAT ATGTCGTACC      5820
     GCACTTATTT GGTAACGAAC CATTTTAGCC AAATTCAAAT CCTGGCAAAA TTGAATATTG      5880
     CCCTATAAAA ATACCACAAA ATTCCCGAGT AGGATTATAG CAAGCTACGG TCACATATGA      5940
     TTTGCATTCT TCCGTTCTCT TTTCGTGAAG GCGTGATCGA GTGCAGTTTA ACTTTATGCA      6000
     AAATCCATGA TTAAAAATCC ACGAGCATCG TGTGGTTTGG ATAATAGTTT TTCAAGGCAA      6060
     ATACTGCCAA GTGATAGTTT CCTTTAACTG CGTCGCTGCC GGTCCCACAT TTGGAGATAG      6120
     AAGTCTTAGT GGCTGCGTCG CCAAGGCGGT CTGTATTGTT TTTCGCCAAA CTTTTGACCA      6180
     CGCGTGAAAC TTACTGTGGC TTCATCGATC GCAGAAAGAT TTACAACTGC TTGCATCAGG      6240
     AGCACCCACC GCGTGCAGCG GAAAGCTGGG CTTGTCCTCT TCTGCTGCCG ACAGATCGCA      6300
     GGTCAACCCC CCCCCCCCCC AGAGTTGGCG TTCTTTTTTT TTTCTACTCT TCATCGCCGC      6360
     ACGCAGGAAG CAGATCGCCG TGCATCCATT TTATGCACAA GTCAACTTGG TGTCTTCTTC      6420
     ATCCGTGCGC ATTCCAAGAA TATTTGTGCA CAACACGAGC CCCAGGCTGC TGGCCTTGTC      6480
     GCTGCGTATG CTGCGAACAT GAAGCAGCCG CAACACGAAT GATCGTGTCC AGTCTTAAGT      6540
     ATCTTTAGAA TAGTTTTTCA TATTTGTGTT AATTTTACCT AAAAATATTT ACTTATAAAT      6600
     TTCTACGATT CTAATTTAGC TTAACTTGTG GGAGATCTGA CAAGTATATA TATGTGATTT      6660
     TCCCGATTTA TATTAATACC TACAGCAAAT CATCAACAGT CATCAGGCCT GCTGACATCG      6720
     ATGGAAAGTG CGTGAGTACG GCACAAAAAT AATAAAAACA CACAAGCATA TATATAAAAA      6780
     GTCAGATACT CCTAAATAGT GTGCTTAAAA TACCTTGCCT TAATTAATCA CATATCTAGC      6840
     TCTCTTAATT TAAAGAAGTT TAAAGTTTAA ACATACATTA ATCATACATA ATTCTAACGT      6900
     AAAGTAAGCC AAACAAAGAA AAGCATTAAT GTAAACTTAA ATACCAGTAT TTGCATTCCT      6960
     ATCTTGATTA TTTTTCCTTT ATTTTATCGT TGATAAGCAA AATTACTCAA TAAGAGATTG      7020
     CCTTAACGTA AATAACGTAA TTTTTAGTTT AAGGATTAGG TTTAGGAAAA TGTATCGGAA      7080
     TATTATCTTT ATCTTCAATT ATATGGGGTC CAAAATGAAC TAATCTGACG TCTTGTTGGG      7140
     CACTAAAGGG TATTTAAAGC AGTGGTTGTA TTAGGGTGGA GTCCGAATGG ATTTCACAGT      7200
     TAGGGTGGGT ATAGAATAAG GCCAATAACA TCTGGGCCTC ATCTTCAATA GGTACACTTT      7260
     TTTGTCCGCT TCTTAACCGT TTGGTTATCG TTTTTTTTTT GAATCTACCG TATCACTGTC      7320
     TACAGTATTG TAACTGTGAC ACTCTTGTTC ATCTCAACAC AAAACCCACG CCCATTTTCC      7380
     CTGAGCATGC CGGTAAAAAT AGTAGACAGA GTGTGTTGGG GTGGACAACG CTCTATGAGT      7440
     GTGTTCGTTA                                                             7450
//
ID   DME278684  standard; DNA; INV; 5108 BP.
XX
AC   AJ278684;
XX
DR   FLYBASE; FBgn0041728; Rt1a.
XX
SY   synonym: Waldo-B
SY   synonym: pilger
XX
FT   source          AJ278684:32..5180
FT   SO_feature      five_prime_UTR ; SO:0000204:1..436
FT   SO_feature      three_prime_UTR ; SO:0000205:4854..5149
FT   SO_feature      polyA_signal_sequence ; SO:0000551:5149..5182
FT   SO_feature      CDS ; SO:0000316:437..1933
FT                   /db_xref="FLYBASE:FBgn0041727; Rt1a\gag"
FT                   /db_xref="SPTREMBL:Q9N9Z2"
FT                   /protein_id="CAB99191.1"
FT                   /translation="MDRTGGGSAPDPNDPFRRSGRLSRSPIRGVGTQIQGGGGEQAGPP
FT                   PPKASDCSAAVEVETLATTVSTTATSLKTMDFISVPAQRAGAKSPSGSPHRSPELTTTL
FT                   QNEDLQGILDMMKAKITAILSSFETRRHVTSEDRGVLVDLSALNKRAIELQEGINKKPP
FT                   PRSTATQTEAEKTKRSQVAPPRQALPNVQVRKTDNHRSAAKSTGKALPTTADSKPESYA
FT                   SVAKDANKDEEWAKVKPKRLRKKPEALILKKTGEVTYSDMLRKMKAEPSLTEFGKHVRK
FT                   IRRTQQGELLLELEGKASEVIPSFKNELEATLKEIASVRTGAHRTALICSGLDETTTAQ
FT                   DLHNSLVSQFQGIRLEPEDVRGLRRRRDGTQIASVLMCANDAIAVINRGVVTVGWSRCR
FT                   IAQDVRPIRCFRCLEFGHRAPYCKSVDRSDCCLRCGEHGHKAKGCVAPPRCLICSSDVD
FT                   KNHATGGFACPTYKANTKGANSRQNDARRN"
FT   SO_feature      CDS ; SO:0000316:1884..4853
FT                   /db_xref="FLYBASE:FBgn0041726; Rt1a\pol"
FT                   /db_xref="SPTREMBL:Q9N9Z1"
FT                   /protein_id="CAB99192.1"
FT                   /translation="MMPEEINIIQLNVNHCAAAQNLLTQTAKERHADVVLLSEPYLPGV
FT                   GNSGVLLDETGKAAIKCTSRLLVEEWDTVPMRGIAYAKIRGIHFYSCYAPPSDSPEQFE
FT                   DMLEKLVNHASGRRPTVIGGDLNAWATEWGSRISNTRGRAVIDAMNLLDLVLLNDGFKP
FT                   TFNNDRGTSFIDVTFVSRVLVAGSNWMVHEDITLSDHNLITFGARTMRPSPKQRRCALG
FT                   PVWDIRKLDEDMLAYQIEGMESIIGHAETMVTALMDRLRAMCDAVMPRKRNTKRKPPVY
FT                   WWSDSLHQLRTECIKARRQAQRSRGQPHHSQCIEVYKAKRTELKNGISAAKANAFKDLI
FT                   DSVDDDPWGLAYKVVRKKLNSAGAGSPQDPAALANIVSELFPSQHTLWQPAVDPPASDF
FT                   PCITSCEVVEAAKRIRPNKAPGIDGIPGVIVKAAATARPEVFRDTFQQCLLDGVFPKRW
FT                   KKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESPTGLQGQQYGF
FT                   RKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILGAMRN
FT                   LGVPDYIRGVIGNYFRDRVLWYVTEDGPRSHQVSAGVPQGSVLGPILWNIMYDGILSIS
FT                   KPRGVELHCFADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEVVLLS
FT                   SRKSVECMRVEVKGVEIASAETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMP
FT                   NVGGPRLPARRLLVAVSKATLLYAAPIWSCVSTKKTYLDSARAVSRTMALRLIRGFRTI
FT                   SDDAAHALSGITPIDLDIKGKYLASEGYTQLEIKEWIRGVWQTRWQESQRGRWTYKLIP
FT                   QLTEWADCEHKTVDYHMTQFLTDHGCFRGYLCRFRHVDTAQCLYCTDAVETAEHILLHC
FT                   SRFAEERAQLVALAGSPLSPRGLVAAMMADKIVWDGAHVIIVTMMKRVRKDEMANRNYR
FT                   "
XX
CC   Derived from AJ278684 (AJ278684.1) (Rel. 64, Last updated, Version 1).
CC   Michael Ashburner.
CC   Any changes to original sequence record are annotated in an FT line.
CC   [polyA_signal annotation looks odd.]
XX
SQ   Sequence 5108 BP; 1411 A; 1307 C; 1398 G; 992 T; 0 other;
     ACATCCATTG TCCCGCGTAT TTCGCACGTC TTTTTGCTGC GCTGCGCGAA TTTCGTCATA        60
     TACGAGTCCG GTCAGCCGTA AACTGCAACA TAAACCTGAA ATCCACTCTG GGGTTTGCGC       120
     CGCGTTTCTG AGCGTCACGG TGTCGTTCCG GAATTCAGAG TGATCCAGTA AACTGGTAAT       180
     AAATCAGATC AGCTGCATCA GACAATACAG CTGATACATT GCCAACCTTT CGCAGTCGAC       240
     GAGCTGGTTA GACTGGCGTT GCCAGATCAG CGGTGGATCG TCATTCGGCC GCGCGCTCGT       300
     TGGGCGCGAA ATTCGAATTC AAATTCAAAT TTGACTAATT AAGTTGAACA AAAATTTGAA       360
     ATATAACCTA AGAACTGAAG CTAGTTCTAT TTCCACGGAG CGCTGGGGAC CAACAAGCCA       420
     AAGTCCCCCT TTTATATCTG ATGGACAGAA CAGGGGGGGC AGTGCCCCCG ACCCCAACGA       480
     CCCGTTTAGG AGGAGTGGTA GGCTATCGAG ACCCCTATAA GAGGAGTCGG AACCCAAATC       540
     CAGGGAGGGG GAGGTGAGCA AGCAGGCCCC CGCCGCCGAA AGCTAGCGAC TGCAGTGCAG       600
     CTGTGGAGGT GGAGACTCTG GCCACTACAT CTCCACGACA GCCACAAGCC TGAAGACAAT       660
     GGATTTCATC AGCGTGCCGG CCCAAAGGCG GGAGCGAAGT CCCCATCAGG ATCGCCGCAT       720
     CGCTCGCCAG AACTGACCAC GACGCTCAGA ATGAGGACCT GCAGGGCATC CTGGACATGA       780
     TGAAAGCCAA GATCACCGCC ATTCTACCTC GTTCGAGACT AGGCGTCACG TAACCAGCGA       840
     GGATAGGGGC GTGCTAGTGG ACCTACGGCG CTCAATAAGA GAGCGATTGA GTTACAGGAG       900
     GGTATCAACA AGAAGCCCCC ACCAGGAGTA CTGCCACACA GACTGAGGCA GAAAAGACAA       960
     AGCGTAGCCA GGTGGCGCCA CCCGACAGGC ATTACCGAAT GTGCAGGTCC GCAAAACGGA      1020
     CAACCATCGA TCTGCCGCGA AACCACCGGG AAGGCGTTAC CCACGACGGC TGACTCCAAA      1080
     CCGGAAAGTT ATGCGTCTGT CCCAAGGACG CTAACAAGGA CGAGGAATGG GCTAAGGTGA      1140
     AGCCCAAGCG CCTGCGCAAA AACCTGAGGC GCTAATCCTG AAAAAAACGG GTGAGGTTAC      1200
     GTACTCGGAT ATGCTCCGGA GATGAAAGCA GAACCGAGTC TGACCGAATT CGGCAAGCAC      1260
     GTGCGTAAAA TAAGGAGGCG CAACAGGGAG AACTACTTCT TGAATTAGAA GGTAAAGCCT      1320
     CGGAGGTCAT CCCCAGCTTA AAAATGAGCT AGAAGCGACG CTCAAAGAGA TTGCTTCGGT      1380
     TCGCACGGGC GCGCATGGAC TGCGCTAATC TGCAGCGGAC TAGACGAGAC AACGACGGCT      1440
     CAGGACCTTC ACAATCCCTG GTCTCCCAAT TTCAGGGCAT CCGCCTGGAA CCAGAGGATG      1500
     TAAGAGGCCT TCGCGGAGGC GTGACGGGAC CCAGATAGCC TCTGTGCTAA TGTGCGCGAA      1560
     CGATGCCATT GCGTCATCAA CCGGGGCGTT GTAACTGTGG GATGGTCGCG TTGCCGCATA      1620
     GCCCAAGACG TCGCCCAATA AGATGCTTCA GATGCCTCGA ATTCGGCCAC CGAGCTCCCT      1680
     ACTGCAAGTC ATCGATCGCT CTGACTGCTG CCTACGGTGC GGCGAGCATG GGCATAAGGC      1740
     AAAGGGCTGC TAGCCCCACC AAGATGCCTG ATCTGCAGCA GTGACGTGGA CAAGAACCAC      1800
     GCGACGGGTG TTTTGCATGC CCCACCTACA AAGCCAACAC CAAAGGAGCT AATAGCCGTC      1860
     AAAATGATCC AGAAGAAATT AACATCATCC AGCTCAACGT TAACCATTGC GCAGCAGCAC      1920
     AGAACCTCTG ACTCAAACAG CGAAGGAGCG CCATGCGGAC GTAGTGCTTT TGAGTGAACC      1980
     ATACCTCCTG GTGTGGGTAA CTCAGGAGTG CTACTCGATG AGACAGGCAA GGCGGCCATT      2040
     AAATGACATC CAGGTTATTG GTAGAGGAGT GGGATACCGT ACCAATGCGC GGCATAGCAT      2100
     ACGCAAAATT AGAGGAATCC ACTTCTACAG CTGCTATGCT CCACCTAGCG ACAGTCCCGA      2160
     GCATTCGAGG ACATGCTCGA AAAGCTGGTT AACCATGCAA GTGGGCGCAG ACCAACAGTC      2220
     ATGGAGGTGA CCTCAATGCC TGGGCTACAG AATGGGGCAG TCGAATCTCT AACACAAGAG      2280
     GCGAGCAGTG ATCGATGCCA TGAACCTGCT AGATCTCGTA TTGCTAAACG ACGGGTTCAA      2340
     CCGACGTTCA ATAATGACAG AGGTACATCT TTCATTGATG TCACTTTTGT TAGCAGAGTC      2400
     TAGTGGCTGG CTCGAACTGG ATGGTCCATG AGGACATAAC GCTGAGCGAC CACAACCTAT      2460
     CACGTTCGGT GCCCGAACAA TGAGGCCGTC ACCCAAACAG CGAAGATGTG CGCTAGGCCG      2520
     GTATGGGACA TTAGGAAACT GGATGAAGAC ATGCTAGCAT ACCAGATCGA GGGCATGAGT      2580
     CCATAATTGG ACACGCGGAG ACCATGGTGA CAGCGCTCAT GGATAGGCTT AGAGCATGTG      2640
     TGATGCGGTG ATGCCGAGAA AAAGGAACAC GAAACGAAAG CCCCCTGTCT ACTGTGGAGT      2700
     GACTCATTGC ACCAGCTTCG GACGGAATGC ATCAAGGCGA GGAGGCAAGC GCACGATCTA      2760
     GAGGGCAACC GCACCACTCC CAGTGCATTG AGGTATATAA AGCGAAGCGA ACGAGCTTAA      2820
     GAACGGCATA TCAGCAGCAA AGGCGAATGC TTTTAAGGAC CTGATTGATA GGTAGACGAC      2880
     GACCCCTGGG GTCTCGCCTA CAAAGTCGTA AGGAAAAAAC TCAATTCCGC GGTGCAGGAT      2940
     CTCCTCAGGA CCCAGCCGCC CTGGCCAACA TCGTGTCGGA ACTATTTCCA GCCAACACAC      3000
     GTTATGGCAA CCCGCTGTTG ACCCCCCCGC CTCTGACTTC CCGTGCATAC GTCATGCGAA      3060
     GTCGTCGAAG CAGCAAAGAG GATCAGACCG AACAAAGCTC CCGGCATGAT GGTATCCCGG      3120
     GCGTGATCGT CAAAGCAGCC GCCACCGCAA GACCGGAGGT CTTCAGGATA CATTCCAACA      3180
     GTGTCTGCTG GACGGAGTCT TCCCCAAGCG CTGGAAAAAG ATGAACTGGT CCTTCTGCTG      3240
     AAAGGCAAGG GGCCCGCAAA TGTTCCACGC AGTTACCGAC CGTTTGTCTG TTGGACATTG      3300
     TTGGCAAGCT CTTTGAGCGC ATACTGTACG CGCGCATTGA GCTATCACTG AAAGTCCTAC      3360
     AGGCCTTCAG GGCCAACAGT ATGGCTTCCG AAAGGGTAAA AGACGCTCGA CGCTCTCAAA      3420
     TCCGTAACAG ACGCTGCCAG GAAAGCACTC GACGGTAACC GTGGTTAGGC GGCAGTAAGA      3480
     AGTACTGTGC CATCATCACG CTAGACGTCA AGAACGCATT AATACAGCGA GATGGCCCAT      3540
     TATCCTCGGG GCTATGCGCA ACTTGGGCGT TCCCGACTAA TACGAGGCGT AATTGGCAAC      3600
     TACTTCAGGG ACCGTGTGTT ATGGTACGTA ACAGAAGAGG TCCAAGAAGC CACCAAGTCT      3660
     CTGCAGGCGT TCCCCAAGGG TCGGTACTAG GACCGATTTG TGGAACATTA TGTATGATGG      3720
     AATACTGAGC ATTAGCAAGC CCAGAGGTGT GGAGCTCACT GCTTCGCCGA CGACGTTGCG      3780
     ATAACAGCGG TCGCCAAGAC AATACCGGAG CTCCAGACAT AAGTAACGTG GCAATCACGG      3840
     CGGCCATAGA ATGGCTCGAG AAAGTCGGAC TTAAATAGCT GCGCATAAGA CCGAAGTAGT      3900
     CCTGCTGAGC AGCAGAAAGT CCGTTGAGTG CATCGTGTAG AAGTCAAAGG AGTTGAAATC      3960
     GCCTCAGCAG AAACGTTGAA ATACCTTGGT GTCTAATAGA CCGAAGGCTC TCGTTCAAGG      4020
     CTCACGCAAG GTATGCCAGC AAAAAAGCGG CATGACAGCA GCAGCCTTGG CGAGAATCAT      4080
     GCCCAACGTG GGAGGACCCA GACTGCCGGC AGGAGACTGT TAGTGGCGGT TTCAAAGGCA      4140
     ACGCTGCTTT ATGCTGCGCC TATCTGGAGT GCGTTTCCAC AAAGAAAACC TATCTAGATA      4200
     GTGCCCGCGC AGTATCACGG ACAATGGCCT CAGGCTAATC AGAGGCTTTA GAACCATATC      4260
     GGACGACGCA GCGCACGCTC TGTCAGGATT ACACCCATTG ACCTGGACAT AAAGGGCAAA      4320
     TACCTTGCGA GTGAGGGATA CACTCATTAG AGATCAAAGA GTGGATTCGA GGAGTATGGC      4380
     AGACCAGGTG GCAAGAGTCA CAACGGGACG CTGGACTTAC AAACTCATTC CGCAACTAAC      4440
     GGAGTGGGCT GATTGCGAGC ACAAACGGTG GACTACCACA TGACCCAGTT CCTCACGGAC      4500
     CATGGCTGTT TTCGAGGGTA CCTTGTAGGT TCCGCCACGT GGATACAGCC CAGTGCCTTT      4560
     ATTGCACAGA CGCAGTGGAA ACGCAGAGCA CATCCTACTG CACTGCTCCA GGTTCGCCGA      4620
     GGAGAGGGCG CAACTCGTGG CCTCGCTGGG TCACCTCTCA GCCCGAGAGG CTTGGTTGCT      4680
     GCTATGATGG CGGACAAAAT GTTTGGGATG GGGCTCACGT GATCATCGTC ACCATGATGA      4740
     AGCGTGTCCG TAAGGACGAA TGGCCAATCG GAACTATAGA TAAGGAGTAC CCCCGTATGT      4800
     TGGCGGGGCA AGAACTCTCG ACTGGTACGC TCAGTTGGTC GTAAAAAGGC GCTGCTGTGC      4860
     ACCGCAAAAG AAGATGGGTG CAACTTGGCA CCACATCCTG CTCACCGATG AAATACCTTG      4920
     ACTGGCAGTC CCGGTGGCTT GACAAGGACA GGAGAGAGAG CGGAGGTTTT TGTTTAGTAC      4980
     GTAGGCATAA GCCCTAGCTG AGGGTTATGA ATCGTGCATG CCATCCAAGG ACATTAGATG      5040
     GTATCTTTAG AAGATTCATT TTCCTGCCGT ATATAATAAT AAAAAAAAAA AAAAAAAAAA      5100
     AAAAAAAC                                                               5108
//
ID   RT1B     standard; DNA; INV; 5171 BP.
XX
AC   AC005734;
XX
DR   FLYBASE; FBgn0042682; Rt1b.
XX
SY   synonym: Waldo-A
XX
FT   source          AC005734:107957..102787
FT   SO_feature      CDS ; SO:0000316:AC005734:107575..106079
FT                   /db_xref="FLYBASE:;"
FT                   /protein_id=""
FT   SO_feature      CDS ; SO:0000316:AC005734:106095..103132
FT                   /db_xref="FLYBASE:;"
FT                   /protein_id=""
XX
CC   Sequence from I. Busseau (personal communication to FlyBase).
CC   Michael Ashburner.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 5150 BP; 1371 A; 1339 C; 1477 G; 984 T; 0 other;
     GCTGCCAACT TGGCGCAGCG GGCGATCTGG AGAGGGAGGC GTTGCCAGAT CAACCGTGTG        60
     ATCAGTGTTG TGTTGCGACA GTAGAGCGCG AAATTCAAAA TTAAACTTAA AATTAAACCG       120
     TTGAATTTTA ATTTAATTTT AATTTTGATT CTGGTTACTG GGAGCGCACA AGTCTTTAAG       180
     AAAGGGGAAA AGGCACAAAG GTCGAGGACA GACCAAATAT CATCCTCTCA CCGTGCTGGT       240
     GCCTAAGCAG AGGCTCTGGT GTCCGAGTCG AGGCGGTACA AACCTCCATC CGTAAAAGCC       300
     AGGGGGAAAT CCGTGGCCTA CGTGGGAACC CCTTTCTAAG GCTGGTGCTT CGCCTAGGTA       360
     ACCTTAGGCC ATCTTTCAGT TGATGGACAG TGCAGTGGGG GGCAGTCCCC CTGATCGGAA       420
     CGACCCGTTC AGGAGGAGCC CCCGACTTTC GAGATCCCCC ACCAGAGGAG TCGGTAACCC       480
     GACCCATGGT GACGGAATCT CGGTCCCGTC GGTGGCAAGG GGTGAGCACG CAGGCCCCCA       540
     GCCGCCGTTG ACTAGCGACT GCAGCGATGC TGTAGAGGTG GAGAACTTGG CTCCTACAGC       600
     ATCTACGACC GCGACAAGTC AGAAGACGAT GGACCACATC GCCGTGCCAT CGCAAAAGAC       660
     GGGAGGGAAG TCCCCAGCTG GTTCCCCTCA TCGGTCTTCG GACCTGACCG CGGCTCTCCA       720
     GAATGAGGAC CTGAGGGGCA TACTTACCAG GATGAATGGC AAGATCAGCA CCTTGCTATC       780
     CGCATTCGAG ACCCAACGGC ACGTGACACG AGAGACAAAG GGCATAGCTT CCGAACTCTC       840
     AGCCCTTAAC AACAGGGCGT TAGAGCTGTA CAAAGGTACT ACTAGCGAGC ACCGCTTGAA       900
     GAGCAGTGCT ACCCAGACGG AGGTACAAAA GCCTACCAAA AAGGCTCCTC AAAATGCACA       960
     GGTACCCAAG GTGCAAGTGC CAAAAATCCA GGCGCCCAAG CCGAGCAACC CTACGTTGGG      1020
     TGGCAACGGT GAAGAAAAGG CAACATCCAG ACCAAACGAG TCCAAACCAG GCAGCTACGC      1080
     ATCTGTCGCC AAGAATGCTA GCACGGGTGT AGAGTGGACC AAGGTGAAGC CTACGCGCCT      1140
     GCGTAAAAAA CCGGAGGCAC TCATCGTAAA AAAGACAGGA GAGGCTTCGT ACGCAGAGAT      1200
     GCTTCGGAAG CTAAGATCGG ACCCGAGCCT TAGCGAACTG GGCAGCCACG TGCGAAAAAT      1260
     CCGGAGAACG CAGAAAGGTG AGCTGTTGCT CGAGGTAGAG GGGAAAGCTT CGGAAAGCGT      1320
     CCCCAAGTTT AAGAGCGACC TGGAAGCGGC GCTCAATGAC TTGGCCTCTG TGCGCACAGG      1380
     AGCGCAAAGA ATAGCTCTAT CTTGCAGCGG ATTGGACGAG GCTACGACAG CAGAGGAGCT      1440
     CCACAGCTGC TTGGTCGCCC AATTCCAGGG CCTGCAGATA AATCCTGAAG ATATCAGGGG      1500
     CCTTCGCAGA ATGCGGGATG GCACGCAAAT AGCCTCAGTG CTGCTGAACG CGAACGTTGC      1560
     GATACCAGTC CTTAAACAGG GCACCATAAC CGTTGGATGG TCAAGATGTC GTATCACCCA      1620
     GGACGTTCGA CCCACGAGAT GCTACAGGTG TCTCGGCTAT GGGCATCGAT CAGCAACCTG      1680
     CAAGAACACT GACAGGGCAG ACTGCTGTCT TAGATGCGGT GAGCGTGGGC ACAAGGCAAA      1740
     GGGGTGCGTT GCAGCACCAA AATGCCTGAT CTGCAGCAGC GAGGTGGACA GAAACCACTC      1800
     GACGGGTAGC TTTGCGTGCC CGACCTACAG AGCGACCCTA AAAGAAGCCA AGAGCCACCT      1860
     TAATGCACAC TCATATTAGC GTAGTACAGC TCAATGTCAA TCATTGCGCA GCAGCTCAGA      1920
     GCCTCCTGGC CCAGACTGCG GCTGAGCGCA ATGTAGACAT CATGCTCCTA AGCGAACCCT      1980
     ACGTCTCTGG TAGCGGACAA TCGTCCATGA TCCTTGACGA GACAGGTAAA GCAGCTATCA      2040
     AATGCTGCAG CTCTCTCCAC GTCGAGGAAC TGGCTGCTTT ACCTATGCGG GGTATCGCTT      2100
     ATGCGAAGTT AAAACACGTG CACTTGTACA GCTGCTACGC TCCGCCGAGC GACACCCCCG      2160
     ATCAGTTCGA GGAGTTTCTG GAGGCGCTCG TGGACCATGC GAGAGGGCGA AGCCCGAAGG      2220
     TCATTGCCGG CGACTTTAAT GCCTGGGCAG TGGAATGGGG CAGCAGGACA TCCAACACCA      2280
     GAGGCCGAGC TGTGATTGAC GCCATGGGAA TGCTGGACCT TATACTGCTG AACGACGGAC      2340
     GGAAGCCGAC GTTTAACAAC GATAGGGGTA CGTCCTTTAT TGACGTTACC TTTGTCAGCA      2400
     GAGGGCTAGT AGACAACAAT AACTGGATGG TCCATGACGT CATGACGCTG AGCGACCACG      2460
     CCCTGATCTC CTTCAGTCTC TCCCCGGAGG ACATGCCCAG GAGACGGCAG AGTAGAGCAG      2520
     TCGGGAAAGC ATGGGACACC AGGAAGATCG ATGAGGCCAT GCTGGCCTAT CAGATCAATT      2580
     CCCTGGAAAT CCCAAGTGGG GACGCAGAGA GTATGGCGGC AGGCCTCATG AATATGCTGG      2640
     GAAGAATCTG CGACGCAATC ATGCCAAGGA AAAATAAGGC ACAGCGCAAA CCACCCGTTT      2700
     ACTGGTGGAG CGCCTCCCTA AGCCAACTAC GGTCTGATTG CCTCAGGGCT AGGAGAATGG      2760
     CGCAACGAGC CAGAGGCAGT ACCCACCACG CGGAACTCTT GGAGGCTTTC AGAAGGAAAC      2820
     GTCTAGAGTT CAAGCACGGC ATCGCGGCTG CCAAAGCGCG GTCGTTTAAG GAGCTGCAGG      2880
     ATGGCGTAGA CAGCGATACC TGGGGCCTCG CCTACAAGCT TGTTACCAAA AAGCTAAGGA      2940
     GGAGAGCGGC AACCCCATCC GACCCGGGGG TCCTGGCTAA CATAGTAGGG GAGCTATTCC      3000
     CAAAGCAGAC CACACTATGG AGGCCAACAG AGGCAGCCCC TGCCCCAGAT TTTCCGTGCG      3060
     TCACAGAACT TGAAGTCGCC GAGGCAGCCA AGCGCATCAA ACCCAACAAA GCCCCTGGAC      3120
     TAGATGGTAT TCCTGGAGCT GTTATAAAAG CAGTGGCGCT GGGTAGACCT GAAATCTTCA      3180
     GGGCCACCTT CCAGCAATGC CTTCTGGACG GAATCTTCCC AACAAGGTGG AAAAGCCAGA      3240
     AGCTAGTCCT GTTGCCGAAA GGCAAGGGAC CAGCACATGC TGCAAACAGC TACCGCCCTC      3300
     TATGCCTACT GGATATAGTA GGAAAACTGT TCGAACGTAT CCTGTATACC AGAATAGAGG      3360
     CAATCACCGA GAGCATCAAC GGCCTGGGAA GTCATCAATA TGGCTTCCGG AAAGGTAAGA      3420
     GCACTCTGGA CGCTCTTTCG GCCGTTTGTA ACATCGCCAA GACCGCTATT TCTGGTGATA      3480
     GATGGTTAGG GGGCAGGAAG GAATACTGCG CAATTGTGAC TCTGGACGTA AGGAACGCTT      3540
     TCAACACCGC CAGATGGCCC GTAATCCTCG CGGCCATGTA CCGTATGGGG ATCCCGGAGT      3600
     ACCTAAGGAT AGTCGTTGGC AGCTACTTTA GGGACCGGGT CCTATGGTAC GATACGGAAG      3660
     ATGGCCCAAA AAGATACCGA GTTTCGGCAG GTGTTCCCCA AGGATCGGTA CTTGGACCAA      3720
     TCCTATGGAA CATTATGTAC GATGGGATCT TGGGCATCAA CAGGCCCGTA GGAGTAGAGC      3780
     TGCATTGTTT TGCTGACGAT GTGGCAATCA CAGCTGTCTC GAAAACAATC GCAGGGTTGG      3840
     AAGACAAATG CAACTCTACG ATCGGTGCTG CCATCCGCTG GCTCGAGAAA GCCGGGCTAG      3900
     CAATAGCGGC TCACAAGACC GAAGCAGTCC TACTAAGCAG CAGGAAAAAG GTGGAGAACA      3960
     TGCTGGTCTC CGTCAAGGGT ACACAGGTGA CCTCTCAAGA GTCCCTAAAG TACCTGGGGG      4020
     TAATGATAGA TCGCAGACTA TCGTTCAAGG ACCACGCGAG CCACGCCAGC AAGAAGGCAG      4080
     CAATCACAGC CTCTTCGTTG GCGAGGCTTA TGCCCAACGT CGGAGGCCCA AGACACCCGG      4140
     CCAGGAAACT GCTGGTGTCA GTAGCAAAGG CTTCGCTACT ATACGCTGCA CCAGTCTGGA      4200
     GCAATGCCAC TGGCAGGGTC TCATACCTGA AAGGAGCTCG TTCGGTGCTA CGGTCAATGT      4260
     CTCTGAGGCT CATTAGAGGT TTCAGGACCA TATCCGAAGA CGCGGCGCTA GCGCTGGCAG      4320
     GCCTGCCGCC GATTGATCTG GAGATCAAGG CTCTCAGCCT AATGCGGAGT GGCGCTTCCA      4380
     GGCAAGAGGC ACACGAGTGG CTATTAGGTG AATGGCAGAG TAGATGGCAA ACGTCGCGAC      4440
     GGGGGAGGTG GACTTATCAG CTCATCCCAG AGATGACGGT TTGGGCAGAG TGCCAACACA      4500
     AATGCTTGGA CTACCACCTA ACCCAGTTCC TCACGGACCA TGGCTGCTTC CGGGCCTATC      4560
     TACTCCGGTT CCGTCACGTA GAGTCAGCCC AATGCTTGTT CTGCGTCGAC GGTGAAGAAA      4620
     CAGCAGAACA TGTGCTAATG CACTGCTCCA GGTTCACGGC GGAGAGAGAG CAGCTAAAGA      4680
     CGCTGTCAGG TTCCCCGTTC AGCCCTAGTG GCTTGTTCGC GGCTATGATG GCGAACAGGG      4740
     GGGCTTGGGA GCGGGGACAC AGCATTATCA TTAATATGAT GAAGCGTGTC CGATCAGACG      4800
     AGATGGCCAA CAGAGTGGAT GTCTAAGCCC AAACTGGTGT CCTGGGTGAC GGCGGGCGAA      4860
     GAATTCATCC TCAGCGTCCC CGGCTCGTCG TAAAAGGCGA CTAAAGGGTG GAAGGAGGAG      4920
     CCCCCATGGA CTACACTGAA GGAAGGGAGT GCGACCTGGC CTCACATCCT GCTCACCGAA      4980
     GTCATACCTT GACTGGCAGT CCCGGTGAGC GAGCAAGGAC TGTAGAGCAC GCGGAGGTTT      5040
     TTGTTTTAGT ACGTAGGCAT AATTCCAATA GGGCTTATGA ATCGTGCATG CCACCTACGG      5100
     ACGGTAGGTG GTATCTTTAG AAGATTTTAA TTTTCCTACC GTAAGTCAAA TAATAAAAAA      5160
     AAAAAAAAAA A                                                           5171
//
ID   QUASIMODO    standard; DNA; INV; 7387 BP.
XX
AC   AF364550;
XX
DR   FLYBASE; FBgn0044355; Quasimodo.
XX
SY   synonym: cruiser
SY   synonym: antonia
XX
FT   source          AF364550:1..7387
FT   SO_feature      five_prime_LTR ; SO:0000425:1..658
FT   SO_feature      three_prime_LTR ; SO:0000426:6729..7387
FT   SO_feature      CDS ; SO:0000316:1074..2081
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044353; Quasimodo\gag"
FT                   /db_xref="SPTREMBL:Q967T3"
FT                   /protein_id="AAK52060.1"
FT                   /translation="MAQPSEQIMILSELHLNQALGQIRHISTFDGSTRELASFVRRVDF
FT                   VMSLYPTTDKRQHSVLYSAIERQLSQHAQEVSQLQQCNTWAELRSVLIDEFKTQIPYEE
FT                   LLRRLYNTYWSGSIRKFVEELENKMFEISSKLSLENNYTNTTLYTAAMANTIKDVIYKR
FT                   IPDRMFMTLARYDITTTTLLRQVAQREGLYDTIVLNTEKAKAKLNSPSTLQSSSKNNGS
FT                   QKNKGNNNDQGIKPYYIQAQQSQNRNNYASNNSKKVESNQATYNEFKQKLEQGRAQNAL
FT                   NFQKPTSYSTTNQPQKRQRESSSGQSKMDTSENFHQLASGSESEVEEEHTHSYK"
FT   SO_feature      CDS ; SO:0000316:2084..5281
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044352; Quasimodo\pol"
FT                   /db_xref="SPTREMBL:Q967T2"
FT                   /protein_id="AAK52058.1"
FT                   /translation="MNNIKLKCLIDTGSSINLMSKNFFNCPINSKAPLDVHTINGQIIL
FT                   KSKITLKPSKLCPTKQTFYLHKFSEKYDILLGREYLEDSKATICYTSNTVTLNKYTFKL
FT                   RLEDINEEEETPKESLKENLLDSPNIEYVNYVIDNELNETNEFRLDHLNDEERKALTSV
FT                   LYEFSDIQYKEGENLTFTSTTKHVITTKHEDPIYRRPYKYPQSFDEEVENQMKDMIRQG
FT                   IIRKSNSPYCSPVWVVPKKPDASGKSKFRIVIDYRNLNEITVDDKYPIPVMDEILDKLG
FT                   NCQYFTTIDLAKGFHQIQMDENSIAKTAFSTKNGHFEYTRMPFGLKNAPATFQRCMNNL
FT                   LADLIYKNCLVYLDDIIVYSTSLEEHIMSLRKVFLKLREANLKLQLDKCEFLKKETEFL
FT                   GHIITTDGIKPNPAKIKAVVNFPIPKSTKEIKSFLGLCGFYRKFIPNFAKIAKPMTLRL
FT                   KKGSIINIKDSDYYLAFEKLKVLITSDPILIHPDFKKSFSLTTDASNFAIGAVLSQEHK
FT                   PICYASRTLNEHEVNYSAIEKELLAIVWATKYFRSYLFGRKFEIHSDHRPLVWLDSIKE
FT                   PNMKLQRWKIKLNEFDYHIKYLPGKENHVADALSRVKIEENFLGETSSNISLPTQATIH
FT                   SAQEDNQSYISLTERPINYYNRQIEFIKDDNNNVETKRYFHKTKIKIHYIEMTNVHAKE
FT                   LIKEYLCTKRSVIFFHNEIDFLTFQNAYIEIVSPNNVTKVMKSNIKLKDIETYSEFKEI
FT                   IIKSHRELLHPGIEKQTNLFKEKYYYPDYQKLIQNIINECEVCNISKTEHRDTKLRYEL
FT                   TPETFNPREKYVIDFYLINNKTFLSCIDIYSKYAALIEVSSRDWLEAKRALLKIFNEMG
FT                   KPSEIKADKDSAFICSALHLWLRSENVNINITTSKNGISDIERFHKTVNEKLRIINSES
FT                   DPENKITQFETILYVYNHKTKHNTTGRTPADIFLYAGTPAYDTQKEKQSKIDKLNKDRH
FT                   SYEVDTRYKQAPLVKSKTTNPFKKTGHVEQIDEKHYEETNRGRKVEHYKSKFKKQKRIN
FT                   KSKYNSSSTPENQVGSD"
FT   SO_feature      CDS ; SO:0000316:5145..6701
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044354; Quasimodo\env"
FT                   /db_xref="SPTREMBL:Q967T1"
FT                   /protein_id="AAK52059.1"
FT                   /translation="MRNITKKQIEEEKLNIINLNLKNKRELIKVNTIPAQLPKIKWGPI
FT                   KQLFIITLIICFIRAVRGQSLEVNPIQAKNGYLIFKTGSINIPINYEYHYLSVNLTKTE
FT                   QTFANLIKQAEEYGTIAQIQYLTEKLDREMNGIRIIKRNKRGLINIIGTAYKYLFGTLD
FT                   QNDKEELEQKIYDLSQHSIQINELNEVIEVVNRGIEVINHLSAISEGDRRLELLVFNLQ
FT                   QFTEYIEDIELGMQLTRLGIFNPKLLRHDPLSHVNSEKLLNIKTSTWLKSDANEILIIS
FT                   HIPRDIIKTALFNIVPYPDKDNNILIENVNDKYYIQDNQVYKQNSGKPIINKCITGILN
FT                   QIPTECRYSKTHNNIGITYVEPNIILTWKLSKIVLNQNCIINREIIIEGDNIIKAFNCS
FT                   VQIENILITSTTLDYTQTVYINNNVTKLEPLSYLNAKEIIKEHTNTYNTLQIITLTILA
FT                   IIILTLILYFIYKYKGIPKKLIVKYKKENPKQIEQQNNTTTENINTVLDTNPVLYPRIS
FT                   A"
XX
CC   Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001.
CC   Michael Ashburner, 9-Apr-2001.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7387 BP; 3008 A; 1350 C; 1091 G; 1938 T; 0 other;
     AGTAGCATAT GTGCCATAGT ATAAGACCAC ATATACTTAC ACACACACAC ACATACATAA        60
     CCACATAGGA ACAGCCATAC ACAAAATCAT AGAATGCCTT AGGATATAAG TCATAAAATC       120
     ATGTATCCAA TAAGAACCCA AATTCTGGTG ACAATAACAA ATCCAGCCTA CCCTAATGTA       180
     AACATTAACA TCCGCTGCCG AATCAGTTAT TCCCACCAAA GGGTCAAAAC CGCTTACGCA       240
     GCTCAAGTTC TCGGCTGATC AGTACCCATG AGTGATCCAC TCAAGAAGGC ACCCAATCCA       300
     ACAGACATAA ACATCCGCAG CCGCATTCGC GACTCCCACC AGAGGGTCAA AACTGCTAAC       360
     ACAGCTTTAA GGGTCAAAAC TTTCCACGTA GCTCAAACTC GGCTGATCTA TATCCATGCG       420
     CAATCCACTC AAGAGAGCGC CTAATTAACG TAAACATAAA TGAGAGCCTA TGTACGCTCA       480
     ATATGAAGAA GTAAATAAGC TCAGCCAAAG GGTTGCTAAG CGTTCGCTTT GCAAATTAGA       540
     TTTAGATTTT ATTCATACTT CAATTGTGTA AGACGTGAAT TTGTCTCCGA CATTCGCTTA       600
     AGTTTTTGAT CAATAAAAAT ACTTTTTTTT ATAAACCAAC AAACCGCGAA GTTGTAATTG       660
     GCGCAGCCGG TAGGATCCGC GTGTGAACAT AATCTCTTAG AGCTAATAGA TTAGTTCGAG       720
     ATTAATAAAG CGCAACTCGT GACGAACAAA GTTTCGCTTG TGCTTCAGTT CATACAAAGC       780
     AGATCCGCAA AAGAACTTAT GTGACAAAAT ATTTGTGAAC AGTTATCTAA CTCTCGATGT       840
     TGGATACTAT TAATACAAAT ATAAATTAAA AAACTGCAAG TGACCATTAA AGTGTGACCC       900
     ACCAAAATAA AAGGTGTGAC TGTTACCAGG TCAGTGTTGT GTAGCCCATC TAGCATTGAT       960
     TGGACTGCTA CAAAGGTGTG CGAATTTTAA ATAAAAAAAA AAAAATAAAT AAAATAAAAC      1020
     CCCGGTATCA ATCTACCAAG TGATTCAAAG AAAAATCAAC TATAGCCAAC AACATGGCAC      1080
     AACCCAGCGA ACAAATTATG ATTCTATCTG AATTACATTT GAATCAGGCT TTGGGCCAGA      1140
     TTCGTCACAT CTCAACATTT GACGGTTCCA CAAGAGAACT GGCATCATTT GTGAGACGTG      1200
     TGGACTTCGT GATGTCCCTA TACCCGACAA CAGACAAGAG GCAACATAGT GTACTCTACA      1260
     GTGCCATCGA GAGGCAGCTG TCCCAACATG CACAAGAAGT ATCCCAGCTA CAACAGTGCA      1320
     ACACTTGGGC TGAACTACGA TCAGTCCTCA TTGATGAATT TAAAACCCAA ATCCCATACG      1380
     AAGAGTTGCT AAGAAGACTT TACAACACCT ACTGGAGTGG TAGTATTCGT AAGTTTGTAG      1440
     AAGAACTAGA AAATAAGATG TTCGAAATTT CAAGTAAATT ATCATTAGAA AATAATTACA      1500
     CAAATACAAC TCTTTATACC GCCGCAATGG CTAATACTAT TAAAGATGTA ATTTATAAAA      1560
     GAATTCCAGA CAGAATGTTC ATGACATTAG CAAGATATGA TATTACAACA ACAACATTAT      1620
     TAAGACAAGT AGCACAAAGG GAAGGCCTTT ACGATACAAT TGTATTAAAT ACAGAAAAAG      1680
     CTAAAGCCAA ATTAAACAGT CCATCTACAC TACAAAGCAG TAGTAAAAAT AATGGTTCTC      1740
     AGAAGAATAA AGGAAATAAT AATGACCAAG GTATAAAACC TTATTATATT CAAGCACAGC      1800
     AAAGTCAAAA TCGAAATAAT TATGCAAGTA ATAATTCAAA AAAAGTTGAA AGCAACCAAG      1860
     CGACATACAA TGAGTTCAAA CAAAAGTTAG AACAAGGTAG AGCGCAAAAC GCTCTAAATT      1920
     TTCAAAAACC CACATCTTAT TCTACTACTA ACCAGCCCCA AAAAAGGCAG CGTGAAAGTT      1980
     CCAGTGGTCA GTCTAAAATG GATACCAGTG AAAATTTTCA TCAACTTGCC TCGGGATCGG      2040
     AATCAGAAGT AGAAGAAGAA CATACCCATT CATACAAATA ACCATGAACA ATATCAAACT      2100
     CAAATGTTTG ATTGACACAG GTTCATCAAT AAATTTGATG AGTAAAAATT TTTTCAATTG      2160
     TCCGATCAAC TCAAAAGCTC CATTAGATGT ACACACAATA AACGGTCAAA TTATTTTAAA      2220
     ATCAAAAATT ACATTAAAAC CTAGTAAATT ATGTCCGACA AAGCAAACAT TTTATTTACA      2280
     TAAATTCTCA GAAAAATACG ATATTTTGTT AGGCAGGGAA TATTTGGAAG ATTCCAAAGC      2340
     AACTATATGC TATACATCCA ATACAGTCAC TTTAAATAAA TACACATTTA AATTGCGACT      2400
     TGAAGATATT AACGAAGAAG AGGAAACACC TAAAGAGAGT TTAAAAGAAA ACTTATTAGA      2460
     TTCCCCAAAT ATTGAGTATG TCAATTATGT AATTGACAAC GAACTCAATG AAACAAATGA      2520
     ATTTCGACTT GATCATCTAA ACGATGAAGA GAGGAAAGCC CTCACCAGTG TCTTATACGA      2580
     GTTTAGTGAC ATACAGTACA AAGAAGGTGA AAATTTGACC TTCACAAGTA CAACTAAACA      2640
     TGTCATAACA ACTAAACACG AAGACCCAAT TTACAGACGT CCATATAAAT ACCCACAAAG      2700
     CTTCGACGAA GAAGTCGAAA ACCAAATGAA AGACATGATT CGACAAGGAA TCATAAGAAA      2760
     ATCGAATTCT CCATATTGCT CTCCTGTTTG GGTAGTACCC AAAAAGCCAG ATGCATCGGG      2820
     AAAATCGAAA TTTCGCATAG TCATTGACTA TCGCAACCTC AACGAAATAA CCGTTGATGA      2880
     CAAATACCCA ATACCAGTAA TGGATGAAAT ATTGGATAAG CTTGGAAATT GCCAATACTT      2940
     TACAACCATT GACCTCGCAA AAGGTTTTCA TCAAATACAA ATGGATGAAA ATTCTATAGC      3000
     GAAGACAGCT TTTTCAACCA AAAATGGTCA TTTTGAATAT ACTCGAATGC CATTTGGTTT      3060
     AAAAAATGCA CCCGCAACTT TTCAACGTTG CATGAATAAT CTCTTAGCAG ATTTAATATA      3120
     CAAAAACTGT CTCGTATATC TGGATGACAT AATTGTGTAT TCCACTTCAT TGGAAGAACA      3180
     CATAATGTCT TTGCGAAAGG TATTCTTAAA GCTCAGAGAA GCAAATTTAA AATTACAGCT      3240
     AGATAAATGC GAATTCCTAA AAAAGGAAAC TGAATTCTTA GGGCACATAA TTACAACAGA      3300
     TGGTATTAAA CCAAATCCCG CAAAAATTAA AGCCGTAGTG AATTTCCCTA TACCAAAGTC      3360
     CACTAAGGAA ATAAAATCAT TTCTTGGTCT TTGCGGTTTT TACCGCAAAT TTATTCCAAA      3420
     CTTCGCTAAA ATAGCAAAAC CAATGACATT ACGACTAAAA AAAGGCTCAA TAATAAATAT      3480
     CAAAGATTCA GACTATTACT TAGCTTTTGA AAAATTAAAA GTGTTAATAA CGTCCGATCC      3540
     CATATTAATA CACCCAGATT TTAAAAAGTC TTTTTCATTA ACTACTGATG CTAGCAATTT      3600
     TGCTATAGGC GCGGTATTAT CGCAAGAGCA TAAACCTATA TGCTATGCTA GTAGAACTCT      3660
     GAACGAACAT GAAGTTAATT ATTCCGCAAT AGAAAAGGAA CTCCTTGCTA TTGTTTGGGC      3720
     CACTAAATAT TTCAGGTCCT ATTTATTTGG TAGAAAATTC GAGATCCATA GTGATCACAG      3780
     GCCATTGGTT TGGCTTGATT CTATTAAAGA GCCAAACATG AAACTTCAGA GATGGAAAAT      3840
     CAAATTAAAT GAATTTGACT ATCATATCAA ATATCTCCCT GGTAAAGAAA ACCATGTAGC      3900
     AGATGCTCTA TCGAGAGTAA AAATTGAAGA AAACTTCCTA GGAGAAACCT CCAGTAACAT      3960
     TTCGTTACCA ACACAAGCTA CTATTCACAG TGCTCAAGAA GATAACCAAT CTTATATTTC      4020
     CTTAACGGAA AGACCAATTA ATTACTACAA CAGGCAGATA GAATTTATAA AAGACGATAA      4080
     TAATAACGTA GAAACTAAAA GATACTTTCA TAAAACAAAA ATTAAAATTC ATTACATAGA      4140
     AATGACAAAT GTCCATGCCA AGGAATTAAT TAAAGAATAT TTATGTACCA AAAGAAGCGT      4200
     AATTTTCTTT CATAACGAAA TAGATTTCCT TACATTTCAA AACGCTTACA TAGAAATTGT      4260
     CAGTCCGAAT AACGTAACTA AAGTTATGAA ATCAAACATC AAATTAAAAG ACATTGAAAC      4320
     ATATTCCGAA TTTAAAGAAA TAATTATAAA AAGTCACAGA GAACTTTTAC ACCCAGGAAT      4380
     AGAGAAACAA ACTAACCTTT TTAAAGAAAA ATATTATTAC CCAGACTACC AAAAGTTAAT      4440
     ACAGAACATT ATTAATGAAT GCGAAGTATG TAACATATCC AAAACAGAAC ATAGAGATAC      4500
     TAAACTAAGA TATGAGTTAA CACCAGAAAC TTTTAATCCT AGAGAAAAAT ATGTTATAGA      4560
     TTTTTATTTA ATCAATAATA AAACTTTCCT GTCATGCATT GACATTTATT CAAAATATGC      4620
     CGCTTTGATT GAAGTCAGTA GTAGAGACTG GCTGGAAGCA AAAAGAGCTC TTCTTAAAAT      4680
     TTTCAATGAA ATGGGAAAAC CGTCCGAAAT AAAGGCCGAT AAAGATTCAG CTTTTATATG      4740
     TTCCGCGTTA CATTTATGGC TTAGGTCCGA GAATGTGAAT ATAAATATCA CAACAAGTAA      4800
     AAATGGAATT TCTGACATTG AAAGATTCCA TAAAACAGTC AATGAAAAGT TAAGAATCAT      4860
     TAATAGTGAG TCCGACCCAG AAAATAAGAT AACACAATTT GAAACTATTC TCTATGTATA      4920
     TAACCACAAA ACTAAACACA ATACAACTGG GAGAACACCA GCTGATATTT TCCTTTACGC      4980
     AGGAACACCT GCATATGACA CCCAAAAAGA GAAACAATCA AAAATAGATA AGTTGAATAA      5040
     AGATAGACAT AGCTATGAAG TAGATACTAG ATATAAACAA GCACCATTGG TAAAAAGTAA      5100
     AACAACTAAC CCATTTAAGA AAACAGGACA CGTAGAACAA ATAGATGAGA AACATTACGA      5160
     AGAAACAAAT AGAGGAAGAA AAGTTGAACA TTATAAATCT AAATTTAAAA AACAAAAGAG      5220
     AATTAATAAA AGTAAATACA ATTCCAGCTC AACTCCCGAA AATCAAGTGG GGTCCGATTA      5280
     AACAGTTATT CATAATAACA CTTATAATAT GTTTCATCCG TGCCGTCCGT GGTCAAAGCC      5340
     TAGAGGTGAA CCCGATACAA GCTAAAAATG GATATCTTAT ATTTAAAACA GGATCAATTA      5400
     ATATACCTAT AAACTATGAA TATCACTATT TGTCCGTAAA CTTAACAAAG ACCGAACAAA      5460
     CTTTTGCAAA TTTAATTAAA CAAGCTGAAG AATATGGTAC TATAGCCCAA ATCCAATATT      5520
     TAACTGAAAA ATTAGACAGA GAAATGAATG GAATAAGAAT AATAAAACGC AATAAACGTG      5580
     GTTTAATAAA TATTATAGGT ACCGCATATA AATACCTTTT TGGCACTTTA GATCAAAATG      5640
     ACAAAGAAGA ATTAGAACAG AAAATATACG ATCTTTCTCA ACATAGTATT CAAATTAATG      5700
     AATTGAATGA AGTTATAGAA GTAGTCAATA GAGGCATTGA AGTAATCAAC CATTTAAGCG      5760
     CAATAAGTGA AGGTGACAGA AGACTAGAAC TTTTAGTATT TAACTTACAA CAGTTTACCG      5820
     AATACATTGA AGATATAGAA CTTGGTATGC AATTAACAAG ACTTGGTATT TTTAATCCCA      5880
     AATTATTAAG ACATGATCCA TTATCACATG TAAATTCCGA AAAATTGCTA AATATAAAAA      5940
     CTTCTACGTG GTTAAAATCA GATGCAAATG AAATACTTAT TATTTCCCAT ATTCCTAGAG      6000
     ACATTATAAA AACTGCACTT TTTAACATCG TACCATATCC AGACAAAGAT AATAATATAC      6060
     TTATAGAAAA TGTAAATGAT AAATATTATA TTCAAGATAA TCAAGTTTAC AAACAAAACT      6120
     CAGGAAAACC AATAATAAAC AAATGTATTA CAGGAATATT AAATCAAATA CCAACAGAAT      6180
     GCAGATATTC AAAAACACAT AACAATATTG GAATAACTTA TGTAGAACCA AACATAATTT      6240
     TAACCTGGAA ATTATCAAAA ATTGTATTAA ATCAAAACTG TATAATTAAT AGAGAAATTA      6300
     TAATAGAAGG AGACAATATA ATAAAAGCTT TTAATTGTTC TGTTCAAATA GAAAACATAT      6360
     TAATTACAAG CACAACACTA GACTACACAC AAACGGTCTA TATCAATAAC AATGTAACAA      6420
     AATTAGAACC ATTATCATAT CTAAATGCTA AAGAAATAAT TAAAGAACAC ACTAATACAT      6480
     ACAACACATT ACAAATTATT ACATTAACTA TACTTGCTAT TATAATACTT ACACTTATAC      6540
     TATATTTTAT TTATAAATAT AAAGGCATTC CTAAAAAACT AATTGTTAAA TATAAAAAAG      6600
     AGAACCCAAA ACAAATAGAA CAACAAAATA ACACAACAAC AGAAAATATA AATACAGTAC      6660
     TTGATACTAA TCCTGTATTG TATCCTAGAA TATCCGCCTG AGGACAGGCT AAATTTAAAG      6720
     GATGGGGAAG TAGCATATGT GCCATAGTAT AAGACCACAT ATACTTACAC ACACACACAC      6780
     ATACATAACC ACATAGGAAC AGCCATACAC AAAATCATAG AATGCCTTAG GATATAAGTC      6840
     ATAAAATCAT GTATCCAATA AGAACCCAAA TTCTGGTGAC AATAACAAAT CCAGCCTACC      6900
     CTAATGTAAA CATTAACATC CGCTGCCGAA TCAGTTATTC CCACCAAAGG GTCAAAACCG      6960
     CTTACGCAGC TCAAGTTCTC GGCTGATCAG TACCCATGAG TGATCCACTC AAGAAGGCAC      7020
     CCAATCCAAC AGACATAAAC ATCCGCAGCC GCATTCGCGA CTCCCACCAG AGGGTCAAAA      7080
     CTGCTAACAC AGCTTTAAGG GTCAAAACTT TCCACGTAGC TCAAACTCGG CTGATCTATA      7140
     TCCATGCGCA ATCCACTCAA GAGAGCGCCT AATTAACGTA AACATAAATG AGAGCCTATG      7200
     TACGCTCAAT ATGAAGAAGT AAATAAGCTC AGCCAAAGGG TTGCTAAGCG TTCGCTTTGC      7260
     AAATTAGATT TAGATTTTAT TCATACTTCA ATTGTGTAAG ACGTGAATTT GTCTCCGACA      7320
     TTCGCTTAAG TTTTTGATCA ATAAAAATAC TTTTTTTTAT AAACCAACAA ACCGCGAAGT      7380
     TGTAATT                                                                7387
//
ID   Beagle   standard; DNA; INV; 7062 BP.
XX
AC   AF365402;
XX
DR   FLYBASE; FBgn0001207; HMS-Beagle.
XX
SY   synonym: midline
XX
FT   source          AF365402:1..7062
FT   SO_feature      five_prime_LTR ; SO:0000425:1..266
FT   SO_feature      three_prime_LTR ; SO:0000426:6796..7062
FT   SO_feature      CDS ; SO:0000316:1527..2930
FT                   /db_xref="FLYBASE:FBgn0044442; HMS-Beagle\gag"
FT                   /db_xref="SPTREMBL:Q967S7"
FT                   /protein_id="AAK53387.1"
FT                   /translation="MANPNNIIRPSAFSSNERPVPSERHDLPEQHRVDMSVEQLTALIG
FT                   QTVAQVLPGLIKQMNNNTLDFTDVSDQVVEPEYRNNLADFDRVPDIVKSIREFSGNPAE
FT                   FGSWKKSVDRIMETYTPFVGTPKYYGILHTIRNKIVGSADVALESYSIPLDWKAMSRCL
FT                   TLHYADKRDITTLEYQMSTLVQGHQQSVEDFHQDVYKNLSLILNKVGCMQMSRESEHFV
FT                   TKMYREKALDTFIRGLRGDLPRLLAIKEPADLPSALHYCLKLENQTFRSNHAANKGQQS
FT                   SFRGNEKPIPAPRNFQPSNAFGHRQPPPVPPRHPMRRPPQYLGQPFPAPRQHVSNFGNA
FT                   PFIPPRQNYQQQWQQYNAPPRPFATKPQPRPEPMDVDGSVQTRNINYMNRPHSDINKRQ
FT                   KNYNIQTVNMRQPSIEVTGSSSSMTGYQRSMQDYETQNNINSTLNEYCDGQIDNLDSEQ
FT                   RDHVLHFLE"
FT   SO_feature      CDS ; SO:0000316:<2870..6049
FT                   /db_xref="FLYBASE:FBgn0044441; HMS-Beagle\pol"
FT                   /db_xref="SPTREMBL:Q967S6"
FT                   /protein_id="AAK53386.1"
FT                   /translation="WTNRQFGQRTTRPRVAFFRVEDSSLPYFECRVGSGKVLRVLIDTG
FT                   SNKNYIQPNLVTNAIPNNKPYIADTPGGDVKISHYKRASLFDFEIKFFLLPTLKTFDAI
FT                   LGKDTMKGMGAQIDLKNLTMTLENGKRVVLKEKQFEAVSTISPRIKHLEVEQRMILNKI
FT                   IDSYPGLFADPNQKLTYTTSVRAAIRTISDTPIYSKFYQYPMSLKDEVHKQISELLHDG
FT                   IIRPSRSPYNSPVWIVPKKLDSSGKKKYRVVIDYRKLNMVTVADRYPIPDINEVLAQLG
FT                   DNKIFSVLDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLPFGLKNAPSIFQRALDDI
FT                   LHEHIGKICFIYIDDIIIFSKDDETHYQNLDTIFRTLQQANMKCQLDKCEFMKRKVEFL
FT                   GFVVSDKGIETSPTKVQAISDFPIPRTLKELRSFLGLSGYYRRFIPNYAKLAKPLSSLL
FT                   RGEDGRISRTLSSKKSVSLNREAIEAFKKLKSSLVSPDVILHYPDFKKEFHLTTDASNF
FT                   AVGAVLSQENRPISFLSRTLSKAEENYATNEKEMLAIIWALKKLKIYLYGKAKVKIFTD
FT                   HQPLTHSLSSWNGNARIKRWKAYLEEYDYEIFYKPGRENTVADALSRGPTVEQINTVAS
FT                   TMHSSDSSSHGLIPSVEAPINAFKNQIFFRESESENYSFSIPFPTFQRHLVDRNLFTPD
FT                   SLLSDLKEYLNPSVINGIFTSEDVMGKIQILYPIHFQGFKIRFCQSKVKDLVNEAEQEE
FT                   EILRTHNRAHRNAVENKAQLSERVYFPKMRKKVSAIVNQCLVCKTAKYDRHPTHPEIRQ
FT                   TPLPEYPGQIIHIDIYSTERHLVLTAIDKFSKLAMGRVIKSKAVEDIRKALRDIVFYYG
FT                   VPKLIVMDNEKSLNSASIKFMLTDQLGIELYKAPPYKSTVNGQIERFHSTLSEIMRCLK
FT                   GDGTHRGFEELLDRAIYEYNYTVHSVTKKRPLEVFFGRIATVAPEKYEQARLDNIDRLR
FT                   QKQETDIEYHNRTRKPIKTYIKGQEIFVRVNTRLGSKLSSRFRKELVKEDRSTTILTES
FT                   GKLVHKSNIRS"
XX
CC   Michael Ashburner, 18-Apr-2001.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7062 BP; 2493 A; 1473 C; 1356 G; 1740 T; 0 other;
     AGTTATTGCC CTGCAATTGA TTCTCTAACA TCTTGTGGTT CCACATAGTC TCCGCTGCCA        60
     TCAACGCCAA CGAACGGTTA AGCGCGACAT CGACACTTCT GCGCTGCGCC GCGGCCGACG       120
     CCTGCTGCGC CGCTGCCGAC GACTTCACTT GATTGCTAGG GACTTAGGGA AACATTTTGT       180
     ACGCTAGATT TAGTTTCAAA TGATAAATTG CAATAAACGG TCGCTTGCGA TCTTCAAAAT       240
     CAAATCGATA ACTGTAATTA TTAACTGGCG CCCGAACAGG GACCAGCGAA TAAACGCGAA       300
     CGAAAGACAA AATTCTAAGT CGCGGAGCAA AATCAAAATT TTGCTAAAAA ATATTCGTTG       360
     GTTAAATTGT GCCGAAGAAA CTCCCGCGAG TTATTAACAA ACAAAATTCA CGGTCGGCTA       420
     TAAAATAAAA TTGTTTGAGA AAAAAACAGA TTTTCCGGAA GAGGAAAATA CTTATCGGCA       480
     TAGCATTGCC CATTGGTGGA TCACAGTTTC TGTCAGGCCA GCCCGCAGAA AACCTTCTTT       540
     GGAGTGCTGA CGTGGATTCC CCAGTAGCCC AGGCAAAAAG GACAACATTC ACCCAGCCAG       600
     GAGGAGTGAC CGCAACAATT CTATGTTAAA TAAATGCAAA ACGAAGAACA GCAATTTCAT       660
     CGAAAAGGAG AAGGAAAAGT AGAAGTAGAA CGCCGAGAAT AACGGAACTA CAGAAGAGCA       720
     ACACGGATAA CAGTTAACAG TGCAACCCAA AACGTAACGG CAGAGGTAAA GACGACGAAC       780
     GGCAGAGAAC GGCTGCGTGA ACCAAAGTGC AGACAAGAAG GAAAAAAAAA GAACAACAAC       840
     AGCACAGCCG TAGCAGCAGC AGCAGCCCGC CAAAAAGAAC AGGAATAAGA ACACGTTGAC       900
     GACGAAGAAG CTGAAGCTGA AACAACCGAA GAGGAGGCAG AGAGACTACA AGAACCTGGA       960
     AAGTACACTG GAAAAAACAT CAGCAATTTG AAATTCAGGC ATCCACCCAT AATAAAACAT      1020
     AAGTATACCA AAAAAAAAAA AAAAAAAAAA AAAAATTTAA GTATATTATT ATTATTATAT      1080
     TATTATTATA ATATTATTAT TATTATTATA TTTTTATTAT TATATTATTA GTATTATATT      1140
     ATTATTATTA TATTATTATT ATTATATTAT TATTATTACA TTATTATTAT TATATTATTA      1200
     TTATTATTTT ATTATTATTA TTGATATTAT TATTAATACT ATATTTTCAA CCCAGTTCCT      1260
     AGAGATCTTC TGAAAGGAAA ATTTTCCTAT TTACTGTTCC TTTCTGGTAC ACTGTTCTCA      1320
     AAGCAAAATA ACCGCGGTGA GCTAAAATTT ATTGCATGCA AAAATAAAAA AAAAAAAATA      1380
     TAAAAATAAA AAATAAAAAA ACAAAAACAA AAGATAAATA AGCAAACACA TACACACGCA      1440
     TTCCATATTT TCTGCCCACA ACTTTTGTTA AGTTCAAATT GGTTTAGGCT TGTTTTGTGC      1500
     AGGTGTTGTC CGAATTAAAA ATCAGTATGG CAAATCCTAA TAATATAATA AGACCATCAG      1560
     CTTTTAGTTC AAACGAAAGA CCGGTGCCCT CAGAAAGACA CGACCTGCCT GAACAGCATC      1620
     GCGTAGACAT GAGTGTCGAA CAGTTGACAG CATTAATTGG CCAAACGGTG GCCCAAGTTT      1680
     TACCTGGATT GATAAAACAA ATGAACAACA ATACTCTTGA CTTTACTGAC GTGAGCGACC      1740
     AGGTCGTCGA GCCCGAATAC AGAAATAATT TAGCGGACTT TGACAGGGTG CCTGATATCG      1800
     TAAAATCGAT CAGGGAATTC TCTGGAAATC CAGCAGAATT CGGGTCTTGG AAAAAGAGCG      1860
     TTGATAGAAT CATGGAGACT TATACCCCAT TTGTGGGTAC TCCAAAATAT TATGGTATAC      1920
     TTCATACCAT AAGAAATAAA ATTGTTGGAA GTGCTGATGT GGCACTCGAG TCCTACAGCA      1980
     TTCCGCTGGA CTGGAAGGCC ATGTCGAGAT GTCTCACTCT GCATTACGCA GATAAACGGG      2040
     ACATAACTAC CTTGGAATAC CAAATGTCAA CTTTGGTTCA AGGCCACCAG CAGTCGGTGG      2100
     AAGACTTCCA CCAAGACGTC TACAAAAATC TGTCGCTTAT TCTAAATAAA GTCGGCTGCA      2160
     TGCAAATGAG CCGAGAATCC GAGCACTTTG TTACAAAAAT GTACAGAGAA AAAGCTCTGG      2220
     ATACTTTTAT CAGAGGCCTT CGAGGAGATT TACCTCGCCT TTTGGCAATA AAAGAGCCAG      2280
     CTGATCTCCC CTCAGCTTTA CATTATTGCC TTAAACTTGA AAATCAAACT TTCAGGTCAA      2340
     ACCATGCGGC GAATAAGGGT CAACAGTCGA GTTTCAGAGG AAACGAAAAA CCCATTCCGG      2400
     CACCCCGCAA TTTTCAGCCG TCGAATGCCT TTGGCCATCG ACAGCCTCCA CCGGTCCCTC      2460
     CACGACATCC CATGAGGAGA CCTCCACAAT ATTTAGGCCA GCCATTCCCG GCGCCAAGGC      2520
     AACACGTGTC TAACTTCGGT AATGCACCGT TCATTCCACC CCGACAAAAC TATCAACAGC      2580
     AATGGCAACA ATACAATGCC CCACCCCGTC CCTTTGCGAC CAAACCACAA CCAAGACCAG      2640
     AACCAATGGA CGTGGACGGC AGTGTACAGA CGCGAAACAT TAATTATATG AATAGACCAC      2700
     ACTCGGACAT AAACAAACGA CAAAAGAACT ACAACATCCA AACAGTGAAC ATGAGACAGC      2760
     CAAGTATTGA AGTAACTGGG TCCAGTTCAA GCATGACAGG CTATCAACGG TCGATGCAAG      2820
     ATTATGAAAC CCAGAACAAT ATAAACAGCA CACTAAATGA ATACTGTGAT GGACAAATAG      2880
     ACAATTTGGA CAGCGAACAA CGAGACCACG TGTTGCATTT TTTAGAGTAG AAGACTCCTC      2940
     ACTACCATAC TTCGAATGTA GAGTGGGGAG TGGAAAGGTT TTAAGGGTGT TGATTGACAC      3000
     AGGCTCTAAT AAAAATTACA TCCAGCCCAA TTTGGTGACG AACGCGATAC CAAATAACAA      3060
     GCCTTACATA GCTGATACTC CAGGCGGTGA TGTAAAAATA TCGCATTACA AAAGAGCAAG      3120
     CCTTTTCGAT TTCGAAATAA AATTTTTTTT GTTACCAACG CTGAAGACTT TTGACGCCAT      3180
     ACTTGGCAAA GACACAATGA AGGGAATGGG AGCGCAAATT GATTTGAAGA ACCTAACCAT      3240
     GACACTGGAA AACGGGAAAA GAGTTGTTCT CAAAGAAAAA CAGTTCGAGG CTGTTAGCAC      3300
     AATTAGTCCG AGAATAAAAC ACTTAGAGGT GGAACAGAGA ATGATATTGA ATAAAATAAT      3360
     TGATTCGTAT CCAGGTCTCT TCGCAGACCC GAATCAAAAA CTAACCTACA CAACAAGTGT      3420
     AAGGGCAGCA ATCCGAACTA TATCGGATAC GCCAATATAC TCAAAATTCT ATCAGTACCC      3480
     AATGTCTCTT AAAGACGAGG TACACAAACA AATTTCCGAA CTTTTACACG ATGGAATCAT      3540
     TCGACCCTCA AGGTCACCTT ACAATTCACC AGTGTGGATT GTACCAAAAA AACTCGACTC      3600
     CTCTGGCAAG AAAAAATACA GGGTGGTAAT CGACTATCGA AAACTTAACA TGGTAACGGT      3660
     AGCGGACAGA TACCCTATCC CTGACATTAA TGAAGTGTTG GCCCAATTGG GAGACAACAA      3720
     GATTTTCTCA GTGCTCGATC TGAAAAGTGG GTTTCATCAG ATTCTTTTAA AGGAATCTGA      3780
     TATCGAAAAG ACCGCCTTCT CCATCAATAA TGGAAAATAT GAGTTTACAC GACTCCCATT      3840
     CGGTCTGAAA AATGCACCGT CAATTTTCCA GCGCGCACTG GACGATATTC TTCACGAACA      3900
     TATCGGTAAG ATATGTTTCA TTTATATTGA CGACATCATC ATCTTTAGTA AAGATGATGA      3960
     AACACATTAC CAGAACCTTG ACACTATTTT CAGAACTCTT CAGCAAGCCA ACATGAAATG      4020
     TCAGTTGGAT AAATGCGAGT TCATGAAGAG AAAAGTGGAG TTCCTAGGCT TCGTCGTGTC      4080
     CGACAAGGGC ATTGAAACCA GCCCAACCAA GGTACAGGCA ATCTCAGACT TTCCAATTCC      4140
     AAGGACACTC AAAGAACTGA GATCATTCTT GGGATTATCC GGATATTACA GGCGATTTAT      4200
     TCCTAACTAC GCTAAGTTAG CAAAACCACT TAGCTCGCTT TTGAGAGGGG AGGATGGTCG      4260
     AATTTCCAGG ACATTATCGT CAAAAAAATC CGTCTCCCTT AATCGCGAAG CAATAGAAGC      4320
     CTTCAAGAAA TTGAAGAGCA GCTTGGTTTC TCCAGACGTA ATACTCCACT ACCCGGACTT      4380
     TAAGAAAGAA TTTCACCTAA CAACGGATGC TTCCAATTTC GCAGTAGGTG CTGTTCTTTC      4440
     ACAAGAGAAC AGACCCATCT CATTTTTATC GAGAACACTC TCGAAGGCGG AAGAAAATTA      4500
     TGCCACGAAT GAGAAGGAAA TGTTAGCCAT TATCTGGGCT CTAAAAAAGC TAAAAATTTA      4560
     CCTTTACGGT AAAGCAAAGG TGAAAATCTT TACTGACCAT CAGCCTTTGA CCCATTCTCT      4620
     CAGTAGTTGG AATGGAAATG CGAGGATTAA GAGATGGAAA GCATACCTTG AGGAATATGA      4680
     CTACGAAATT TTCTACAAGC CAGGCAGAGA AAATACTGTA GCCGACGCTC TGTCCAGAGG      4740
     ACCGACAGTC GAACAAATTA ACACAGTAGC CTCAACAATG CACAGCTCTG ACAGTTCGAG      4800
     CCATGGGCTG ATACCTAGCG TTGAAGCCCC GATAAACGCA TTCAAGAATC AAATTTTCTT      4860
     CAGGGAGTCC GAGTCAGAGA ACTACTCATT TAGCATTCCA TTCCCGACAT TTCAAAGGCA      4920
     TTTAGTAGAT CGCAACTTGT TCACACCCGA TAGTCTCTTG TCAGATTTGA AAGAATATCT      4980
     TAACCCATCC GTGATTAATG GAATTTTCAC ATCCGAGGAT GTAATGGGGA AAATTCAAAT      5040
     TCTCTACCCC ATCCATTTTC AGGGTTTCAA GATTAGATTC TGCCAAAGCA AAGTCAAAGA      5100
     CCTTGTTAAC GAAGCCGAAC AAGAGGAAGA AATACTTAGG ACACATAACA GAGCACACAG      5160
     AAATGCTGTG GAAAATAAAG CTCAGTTGTC CGAAAGAGTA TACTTTCCTA AAATGAGGAA      5220
     AAAAGTTTCG GCTATCGTGA ATCAGTGTTT GGTGTGTAAG ACTGCTAAAT ATGACAGACA      5280
     TCCCACGCAT CCAGAAATAA GACAAACTCC CTTGCCAGAA TACCCCGGAC AAATTATTCA      5340
     TATTGACATC TACTCGACAG AACGACATCT GGTGCTCACG GCGATTGATA AATTTTCCAA      5400
     ACTGGCCATG GGAAGAGTTA TCAAATCCAA AGCTGTAGAA GACATTAGGA AAGCCCTAAG      5460
     AGATATCGTG TTTTATTATG GAGTGCCTAA ATTAATAGTA ATGGACAATG AAAAGTCCCT      5520
     CAACTCAGCC TCTATCAAAT TCATGTTGAC AGACCAGCTG GGTATTGAGC TCTACAAAGC      5580
     ACCTCCGTAT AAGAGTACAG TAAATGGACA GATAGAAAGA TTTCACTCCA CACTCTCTGA      5640
     AATAATGAGA TGTTTGAAAG GAGATGGAAC ACATAGGGGC TTCGAGGAAC TTCTCGATAG      5700
     GGCCATCTAT GAATATAACT ACACTGTCCA TTCTGTCACA AAAAAACGAC CTCTAGAGGT      5760
     GTTCTTCGGC AGGATAGCTA CCGTAGCTCC AGAAAAATAT GAACAAGCTA GACTGGACAA      5820
     TATAGACCGA CTTAGGCAAA AACAGGAAAC CGACATAGAA TACCACAACC GGACAAGAAA      5880
     GCCCATAAAA ACCTATATCA AAGGGCAAGA AATTTTCGTT AGGGTTAATA CAAGATTAGG      5940
     TTCTAAGTTA TCAAGTAGAT TTAGGAAGGA ACTAGTTAAG GAAGACCGAA GTACCACAAT      6000
     ATTAACAGAA TCAGGGAAAT TAGTACATAA AAGTAACATA AGATCATGAT TGCTTCAGAA      6060
     TAATTACTGT GGCCACATCG ATAGACAAGT AGAACATAGA AACATTAAAC ATACTGATTA      6120
     ACGTAACCAC GAGAATTAAA TTTGAAACGA TTCGACTTTG ACAGACGAGT TGGCCATAGG      6180
     TTTGCAGAAT TAGATTGGGC TCGTGAAAGA AGAGATTGCG TTGTGAATGC GTTTCTGCGG      6240
     AGCGAGTTTA AATTGAATGA GACCAGTAGC CTACTTGAAA ACAATATACC GATTTCTGCC      6300
     TTGACGGTCA AATAAATGTT AAAACTTTCA CACGTTCTCG CTTTACACAA CGGAACTACA      6360
     ATTTGAATGC CATTGAAATC TCCATATTGA ATCAGTTAAT TCCTTATTTC TTATATTTTA      6420
     AAACATGATC AGTAAAGGAA ACTAATAATA ATAAATAAAT AATAATTTAA TTTGAATAAT      6480
     AATAAAATTT ACCAATTAAA GACGAAATGT ACGGAATCAA TGCCTTCTGC AAAGGTTCCA      6540
     ATGGTCTAAA AATATGTAGA TATAAATTCA TTAGTAATTT AGTAAAAACC AGAATTTTAA      6600
     TAGAAGCAAT CAAGTTGTCA ATGCAGAACA CATCCGAGTT GCACAAACCT CGAACGCACG      6660
     CAACAATAAA CACCTGGCAT TCAAACCATT AATGCTGTGC CCAAACTACC ACGAATCACC      6720
     CCACCAACGA TGCGACTCAA AAACATCCCA TCCTTATGAT GACCGCTCGA GGACAAGCGT      6780
     CAATTAAGAG GGGAGGAGTT ATTGCCCTGC AATTGATTCT CTAACATCTT GTGGTTCCAC      6840
     ATAGTCTCCG CTGCCATCAA CGCCAACGAA CGGTTAAGCG CGACATCGAC ACTTCTGCGC      6900
     TGCGCCGCGG CCGACGCCTG CTGCGCCGCT GCCGACGACT TCACTTGATT GCTAGGGACT      6960
     TAGGGAAACA TTTTGTACGC TAGATTTAGT TTCAAATGAT AAATTGCAAT AAACGGTCGC      7020
     TTGCGATCTT CAAAATCAAA TCGATAACTG TAATTATTAA CT                         7062
//
ID   Tinker   standard; DNA; INV; 6112 BP.
XX
AC   AC004377;
XX
DR   FLYBASE; FBgn0043969; diver.
XX
SY   synonym: mazi
SY   synonym: Nuria
SY   synonym: Tinker
XX
FT   source          complement(AC004377:71947..77835)
FT   SO_feature      five_prime_LTR ; SO:0000425:1..224
FT   SO_feature      three_prime_LTR ; SO:0000426:5889..6112
FT   SO_feature      CDS ; SO:0000316:577..5820
XX
CC   Michael Ashburner, 5-May-2001.
CC   Any changes to original sequence record are annotated in an FT line.
CC   Sequence coordinates from M. Butler, Personal communication to
CC   FlyBase, 30 April 2001.
XX
SQ   Sequence 6112 BP; 1853 A; 1502 C; 1247 G; 1510 T; 0 other;
     TGTACGGATT ATGAGCGGAG TCACCCGGTG CTTCAGCTGT CTTAACAGCG GATTAACATT        60
     TTATATATCG ATGCTAATTG AACTGAACTG TATTCTTTCT TTCGCTCTTG TAATTTTGCG       120
     GTCATAGCGA TCAGACGTGA TTTTTGTATA TGAAGAAATA AATGAAGTTA AATAGTGTAT       180
     ATATGATTCT TATTTGCGAA CCCCATTACA ATGATGTCAA AGCAGTGAGG CATCACAACT       240
     ATTCATTGGT GGCCCATGAG GGGAACCTTG CTCATAAGAA TCATAATTAA TAATTGCTAA       300
     AAGCTGTTTG GCAATTTTAT CTTCGTGGTC GGCTTCATCC AGATAAATCA CCGTGCCTAC       360
     GTTTTCTATC GCGCTCGCTC TCATCACGAC AGAGCAGTAT ACGCAAACAT TCGCGCTCGC       420
     TCTCATCACG ACAGAGCTAA GTCCCGTTGC CCTTCGATTC CGTTAGATTT GCCGGAATCT       480
     CTGCCAACTC AAAAAAACAA GACGTCAAAG AAGAACACCG ATAACATACG AGCATTTGTG       540
     CATATTACAT ACAGTGGAGC AACGTCAGTA TAAACAATGT CGAAATTTGA TCAACTGGTG       600
     CGAGTTCAAA CTGACCGCAT TGAGTCTTTG AAGCGCTTGT TCAGTAATGT GAAAAAAGAC       660
     TCGAGTGCGC GGAAAACGGA AATATATTTC GAAAAACGTT TGAATCAAAT CGACGAGTTT       720
     AACAAAGAAT TTCATCAGGC GCATCACACA CTTATATGCA TGGCAGACTA CGAAGAAAGT       780
     GTGTATAAGC AACAAAATAC AATCAGCCAA TTCGAAGACC TGGGCATGGA AGTTTACTGT       840
     TTCGTGGCCG AAGAAAAGAA ACGAATTTAT CCAGGCACAG TGACGCACAA CGAATCAGCT       900
     AACTCTACAA TAACAACACA TGTAGAGGAA GTACGGATAC CACTGCCAAA ATTACCAGTT       960
     CCGAAATTCT CTGGCAACTG CGCGGACTGG CCAAGTTTTC ATGATGCATT TTTACGCTTA      1020
     ATTCACAATA ATGAGCGTCT GGATAAGATT CAAAGGTTCC ATTTTTTAAA GGAAGCATTA      1080
     CCAGTAGGCC TGGACAACGA CATTCGCCAA ATCGCTTTAA CTGAAGCAAA CTATGAAGTC      1140
     GCTTGGACCA CACTTCTACA ACGATATAAC AACCCACGAA TTGTGTTCGC CAGCCACATG      1200
     AACATGCTCT ACAACTTACC GAATCTTTCG AAAGAAAAAT CTGCTGACAT ACGGTCTATG      1260
     GTTAGTACAG TCAACGTCTG CATTGCCGCT TGCAATACCG TCAAGGCGCC ACTACAGGGA      1320
     GGAGATTTTT GGTTGACTCA TTATCTAACA ACCAAACTAC CCAAAGACAC TCACACAGCT      1380
     TGGGAGCATC ATCTGGGCAG CAAGATTGAC GTTCCTTCAT ACAAAGATCT GCAACAGTTC      1440
     CTCAATGATC GACTTGTTAC GTTAGACGCT ATTGAAAGCC GTAACGCGTG CAGCGGCATG      1500
     AAACAGTCAA ATGAAACTTC AGACGGTACT AAACGCGTGC GTGTGCACAG CGCCCACACC      1560
     AGGTCGGGTG CTTCCGCGTC CGCTTGCTAT CATTGTGGCA ACTTACACAT ACTTCGAAGA      1620
     TGTCCGCAAT TTCTTTCAAT GGATTGCTAC CAACGGAAGG AAGTGGCCAG CAAGGCAAAA      1680
     TTGTGTCTCA ATTGCCTGGG AAAATCGCAC ACACAAGCAA GCTGCCCCAG CAACAAGAAT      1740
     TGTCTTCATT GTGGTCAACG TCATCACACG ATGTTACATT TTCCAGCAAC ACAGCCAACG      1800
     CTGATACCCT CCTCGACATC ATGCCAAAGT TCAGCAGCCA GTTCAGATGC CAAGCCGACT      1860
     CTACAGTGCA TGTCAACTAC AACTTCATCT ATGACTCATC GAAAGGTACT ACTAGCAACA      1920
     GCTCGGGTTG TACTCAGTAA CACACAGACA GGATGCCAGG CCACGGTAAA CGCGCTTCTT      1980
     GACCAAGGAT CGGAAGCAAC TATCATTTCG GAGCATGCTG TACAGTCTCT CCAGCTCTCC      2040
     CGAAGCACAA CTCGCACTGC AATCACCGGA GTCGGTCAAG ATTCAGGACG ACGCTGCAAA      2100
     TTCATCGTAA GTTGTTCGGT GCAAACAGCA ACTAACCCAA ATTTCTCGTT AAAGGTCGAC      2160
     GATGCTTATG TTTTGAACAC GTTGACATCA CACATGCCAA GTCAAAGTTT TCCAGCAGGA      2220
     AACTGGAGTC ATATCCATGG TCTCATGCTC GCAGACCCCT ATTATTATAG ATCCAAGCGA      2280
     ATCGATATCA TTTTTGGAGC CGACCTTATG GCACAACTCT TGTTACCTGG AACTAAGATT      2340
     GGCTTGCCAA ACGAACCCAT AGCGCAGAAT ACTCAACTCG GATGGGTTCT GTTAGGCAAT      2400
     GTTGGCAACA CGCATATTAC ACGCCACATT CGATGTAATC ATGCCATAAT AAACTCCGAA      2460
     GAGCTGCTTA AGGTATTTTG CGAGGTAGAA TCAGTTCCAG AACGCCCAAA GCTCTCCAAA      2520
     GAAGATCAAT GGTGCGAGTC TTTCTTTAAG CAGACCCATC AACGTCAACC AGACGGCAGT      2580
     TATCAAGTCC GTTTGCCATT CAAGAGGAAC TTTGACCCCA GTATGACGCT CGGAAAATCT      2640
     CATCAGATCG CCCTGAACAG ATATCTTCAA CTCGAAAGGC GCCTTCAAAG GGACCCAGAC      2700
     AAATGGATCA GATACTGCAA AGGAATTGAA GAATATTTTC AACTAGGTCA AATCACGTTG      2760
     GCAGAGACGA GCGAAAACTC AACCATAACC ACGGATTCCT ACGGTCGGCA TGTTGCATCA      2820
     TGCGTGCTAC CACATCATGC AGTTTTCAAA GAAGAAAGCC TCACCACAAA ACAACGTATC      2880
     GTTTTTGACG CATCGGCCCG GACCTCAAAT GGCAGATCGT TAAACGATGT ACTATGTGTA      2940
     GGTCCCACGC TGCAAAATGA TCTGCCAGCC GTTCTCTTGA ATTGGAGACA ATATCAGTTT      3000
     GTTTTCACTG CCGATATACA ACGAATGTAT CGCTGTATCA ATGTCCACCC TGATGACACG      3060
     CAGTACCAGA GGATTTTATG GCGGGCGGCG GATGGAGTCA TCAAACAGCA TTGCTTAACT      3120
     ACCGTCACGT TTGGAACAGC GTCTGCACCT TATACAGCTA TAAGAGTCAT CCATCAAATA      3180
     GCTGAAGACA CACAGACAAA ATATCCTATG GCATCCAACG TTCTCAAAAA TGGGATATAT      3240
     GTCGACGACA TTCTCTCAGG CGAGCATTCA CAAGAGGCAG CAATACGGAA AAGTTTGCAA      3300
     ACTATGCTAG CTTTAAAATC CTCTGGCATG GAGCTACGAA AATGGGCTAG TAATGACCAG      3360
     GATCTGATGG CAACGATACC TCTCGAGCAT CGATGCAAGC AGACATCCCT CAGTTGGGAC      3420
     AATGCGGACA CCATCAAAAC ACTGGGTATG TACTGGTTGC CCAAGCAAGA TTGCTTCACT      3480
     TATAAATTAC TAGCAAATAC TCCAGCCGGT ATAACAAAAC GAGAAATCCT ATCGACCATA      3540
     GCACGTTTAT TTGATCCTCT TGGATTAATC GCTCCAGTTG TAATTTCAGC AAAGATTATA      3600
     TTGAAAGAAA TCACACTAGC GAAGCAATAT CGCGAGGACG GATCGAGTAC CTCACTGGAT      3660
     TGGGATGAGC CAGTTCCCAA CACCATTGCC GTCAAATGGC AACAATTTCG ACAGCAACTA      3720
     ATGAAGGTTA AGACGATCAA AATACCACGC AGCGTCAAAT TTACGCCACT ATTTAGTAGT      3780
     GAGATACAAC TGCACACCTT TTGCGATGGA TCCTCCAGTG CTTACGCAGC AGCAGTGTAT      3840
     GCACGCACCC AACAGTCTGA TGGGACTTTC TATACAACGC TCATCGTCGC AAAATCAAAA      3900
     ATTTCGCCAA CCAAGCCGTT AACAATACCG CGCACTGAGC TATGCGGTGC AGTATTAGCT      3960
     ACCAAACTCA CCAAATGGGT GCTGGAGAAT AACCGATGGA CCAATGCACA TATATCTACC      4020
     TTTTACTGGA CCGATGCTAC CATTGTTCTG CACTGGATTA AAGGAGACAT TACTAGGTGG      4080
     AAAACGTTTG TAGCCAACCG AGTGTCTTAC ATTCTCGACC ACACCTCAGC GGCTCAGTGG      4140
     CACCACATAG ACACATCGGA AAACCCAGCA GATTGCGCAA CCAGAGGCTT ACCACCGAGC      4200
     CAAATACCTG ATATTTGGTG GCATGGCCCA TCCTGGCTAT GCAAACCACA CAATATTTGG      4260
     CCAAACACGC AATCACAATT GCTCAATCCA GAAGAACGGG ATCTGGAGGC CAAATCCATA      4320
     AAAATTAGAG CCTTCACTAC CTTGTCAGAC ACAAAGGATT CTATTATTGA CCGATTCTCG      4380
     TCGTATACAA AACTGCTACG TGTCACGGCA TACATGTTAC GATTCTGCCA CAATGCTCAT      4440
     GCTCGAGCAC AACGAAGTCA CGGATCACTC TCTCCTGACG AGCTGGATGA GGCCCTGTGC      4500
     TGCATAGCTC GCCTTGCACA ATCCGATACA TTTCACGCCG ACATCCAAGC GCTTAAAAGG      4560
     AACAAGCCGT TACCACCCCG TAGCACACTT TCAAATCTTA CACCGTTTCT TGACAACAAT      4620
     ATCTTGAGGA TTCGTGGCCG TCTCAAGCAT TCAAATCTCT CTTTTTCTCG AAAACATCCA      4680
     ATTATATTAC CTCATTGTCA CCTATTTACA GATTTGGTAA TTCAACACTC TCATCAGCTC      4740
     ACTCTACATG GCGGCGCTCA ATTAACACTG GCTCACATAC GCTACAAATT CTGGATTCCC      4800
     AGAGGCAGAC AAGCAGTCAG GCGAATCATC CGGAAATGCG TCACATGTTT TAAGGTAGCT      4860
     CCAGTCGTAG CGAAGCAATT GATGGGTGAC TTGCCATTAC ATCGAGTCAA CCCCCCAACT      4920
     CGTCCGTTCA TTACAACAGG AGTTGACTAC ACTGGTGCGA TTGAACTTCA AGCCGCGCGT      4980
     GTACGAGGAT CAACCACCTA CAAAGGCTAT GTAGCCATTT TTATATGCTT AGCAACCAAG      5040
     GCGGTCCACT TGGAAGCCGT CACTGGACTT TCAACAGAGC ACTTCCTGCA AGCATTTACG      5100
     CGATTCACCG GACGTCGAGG ACAAGTTCAA CATATGTATA GTGATAACGG CACAAATTTT      5160
     GTTGGCGCGA GTACATCGCT TAACCAGCCC ATCACTTGCA AGGCAGCCCT AAACGAATCG      5220
     ACATGTCAAC ATGGGACAAG GTGGCATTTC ACACCTCCAT ATTCTCCCAA TTTTGGTGGC      5280
     ATCTGGGAGG CAAACGTGAA AGCAATGAAG CATCATCTTA AACGGATCGT CGGCAGCCAC      5340
     AAGCAGACGT ATGAGGAGCT TACTACAGTT TTGATCAGGA TTGAAGCATG TTTGAACTCA      5400
     CGTCCACTTT GCCCGCTAAC CGCCGACCCT GACGATTTAG AAGTACTAAC TCCAGCACAT      5460
     TTCTTAATTG GTGACGCACT ACTGGCACCG CCACAAGGTC GGCCGAATAA TAAGCCTTTG      5520
     CGTGAACTAT TTCTCGCACA ACAACACATG ACGCGACAAT TCTGGTCTCA ATGGTCTCGT      5580
     GATTGGTTAT CACACTTGCA AACTCGGCCA AAGTGGTGCC AAATCAAAGA TAATCTTAGC      5640
     ATCAACGACT TAGTCATTAT AAAGGATGAT AATCTACCAC CAGCTAAATG GACTATAGGC      5700
     CGAGTCGTCG AACTGCACCC TGGATCGGAC TCGCTAGTCA GAGTGGTTAC ATTAAAGACG      5760
     AAATCTGGCA TTCAAAAGAG GTCAATCACA AAGCTTTGTC CACTTCCGAT TTCAACATAA      5820
     TTATGATCAA CACACGGATC AAGAATCACA AGGAGCCTTC ATGCTGGACG ACGCATTGGC      5880
     GGGCGGCATG TACGGATTAT GAGCGGAGTC ACCCGGTGCT TCAGCTGTCT TAACAGCGGA      5940
     TTAACATTTT ATATATCGAT GCTAATTGAA CTGAACTGTA TTCTTTCTTT CGCTCTTGTA      6000
     ATTTTGCGGT CATAGCGATC AGACGTGATT TTTGTATATG AAGAAATAAA TGAAGTTAAA      6060
     TAGTGTATAT ATGATTCTTA TTTGCGAACC CCATTACAAT GATGTCAAAG CA              6112
//
ID   TABOR    standard; DNA; INV; 7345 BP.
XX
AC   AC007146;
XX
DR   FLYBASE; FBgn0045970; Tabor.
XX
SY   synonym: wolfman
SY   synonym: Pilgrim
XX
FT   source          AC007146:115349..122693
FT   SO_feature      five_prime_LTR ; SO:0000425:1..506
FT   SO_feature      three_prime_LTR ; SO:0000426:6840..7345
FT   SO_feature      CDS ; SO:0000316:1229..145
FT                   /db_xref="FLYBASE:;"
FT   SO_feature      CDS ; SO:0000316:1531..2851
FT                   /db_xref="FLYBASE:;"
FT   SO_feature      CDS ; SO:0000316:2787..6479
FT                   /db_xref="FLYBASE:;"
XX
CC   Sequence & annotation from Horacio F. Naveira, September 21 2001.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7345 BP; 2928 A; 1303 C; 1286 G; 1828 T; 0 other;
     TGTAATGTGC ACACATATCG AATAAGCACT GTATCAAATC AGAACATTGG GAACAATCAC        60
     ATTGTAGCAC TTTTGCAACA ATGTTTATGT AAGACTTTTC AGTTCCCAGG CATATCTTGA       120
     GTGCTCAGCA ATCTGACCAC ACAAGAATGC TATTCAGACC AGAAGTGCAG AGTCAGCATA       180
     ATTAGCATGC GCGACTGCTC GATCTTTATG TCCACATGAC TCTCTTAGAC AGCGGCGCTC       240
     TCGCTGCCAA AGTTAAGTAC ATAAGAGCAA AGCAACGTCT CTGCCGACGG CCTCTCTGCC       300
     GGCGCAGACG GATTGCATTT GGCTAGCTTG GACTCTTCTA GACCAAGTAC AAGGCAGTCG       360
     TAAAGGAGTC GTCAAAGAGC CTTCAACATG TCCTAATTGA ATATTAATGA GTCTTAACAG       420
     AAGTTACAAT TTTACTGATA TCATACTGAA TCTCTATTTC AATAAAAGTA ATATAAAGAA       480
     CACAAAAATG CATTACAATT ATTACATGGC GACCGTGACA TGGTCACTTA AGCCTGTAAA       540
     ACAATAATAA AAAGAAATAT ATAAAAGTTA AAATGCGAAC AGTGACCATT AAAAAATAAA       600
     ATTGTGACAA TTGATCAAAC CCAGACGACA ACAGAAGCCG CAAACTGGAG GACTCTGCTC       660
     CTATCGAGCA AAGGGACGCA CCTACTCTAC AAGAGGCACT AGAGGTGTGT CCAAACGATG       720
     GACCACGCCC ACTCACAATA GCTGAGTATA GGGCAAGAAG ACAGCCGAAA CCAAAAATAA       780
     AGAAGAAAAG AAGCGGCAAA AGGATCAAGC TTCTTCAACA ACGGAGATTA ATAAAGGACC       840
     TAATAAAGAC GGCAACTACG GAGGAAGAGA AAACTAACCA AGCCAAAAAT CTGGAAGCGA       900
     TTGAAGCCAA ATTGTGCAGT GGTGCGCAAT AACGCAGTTG AGGCTGTATT TAATACCAAT       960
     GCCCCAATCT GCCTTAATAT TAAAAATACA TACCTCAAGC CGATGCGTGA AAACGCTGCT      1020
     TGAAAAATAC TAATCTCTGT TAGGCTTTTA CTAAAAACAT GTGTACGGTA TTGAATTATA      1080
     TAGAGCAAAA CATTGTAAAC CGTACACATG CCCTCTAACT AACTTTTTCT TGGACAGACA      1140
     TACGTGTAGG GAGAAATTAT AGCAATATAC AATTTTTAAT CAAAATTTAA TAAATAAATA      1200
     AATAATAATA ATCGTTCAAT TAACAACTAT GGGTTGGTTC GGATCTGACG ATAGTCAGAC      1260
     CAAAGACAAC ACGGCTAATG TCGTGAACAA CGTCAAAATT GTAGATCACA CAGAAGATAT      1320
     TCAAGCACTG TGGGTTTTAC TCCTAATTTT GACAATTACA AGTGTGGCCC AGTTCCTTCT      1380
     GACGTTGTAC ATAAAACACA ACAAAATATT AAAAAGAAGA TATATGAGTA GGGCGAATAA      1440
     TCTAGACAGG GTTTAAAAGA AAAAAAAAAA ATATATTTTA AAGAATGAGT ATATAAATAT      1500
     ATACTAACAA GTAGGAATAT ATAAAATAGT ATGGAATGGA ACGAGTTATG TAAAAACATA      1560
     ACAAGAATAA GAAACGAATT TGAAAAATCT CATAAATGTT TGTCGCAAAA TAGACCTATT      1620
     TTAGGACCGA CAACAAAGAA ACATGCAAAT ATTCTGGTAA ATTCCTTCAA CGAAGCACGA      1680
     ATACTAGTGT ATGATAACAA GGAAAGACTA AATCCAGATC ATTGGTCTCA GGTATCGAAA      1740
     GTTCTCATAA AACTTAGATC GAACTTGTTA TCTGTAAAAT TGAAACTTGG TTTGGATATA      1800
     TCAATACCAA CCATTTTAAA TTCGCCAATA AAAATAGAAT CGGACGAACA AACAGAAACA      1860
     GAAATAGAAG ACGAAGATTT AAACAACTTA ACAATTCCAG CTATATTAAC ACTAGCTGAA      1920
     TTGACGGAGG AAGAATTGGC TGAGTCAGAC ATAGAAGAAA CAGAAACAAA ATCTGTCATC      1980
     ATGGTGGACG AAGCAGCTGC CCAGAGGGCA TACATAAAAG ACATTTCAAC GGCGATTCCG      2040
     GAATTTGACG GTAAAAAGAT CAATTTGCGT AGATTTATCA CGGCAATCAA GTTGGTTAAC      2100
     CTGACTAAGG GACCACATGA AGCTATTGCC ATTGAAGTGA TTAAATCAAA AATAATCGGA      2160
     ACAACACTCT ATAGAGTACA GAATGAAGTT ACAATTGATG CCATAATCAG GAAATTAGAA      2220
     GAAGTGGTCG TAGGAGAAAC AACGGACGTA GTAAGAGCAA AAATGGCAAA TGTTTACCAA      2280
     AAAGGTAAAA CAGCCACACA ATTTACAAAT GAAATTGAAA ACCTACGCAA GTCTCTTGAA      2340
     TCTTCATATA TAGATGAAGG ATTGCAACCA GAACATGCTA TCAAATTTAG CACAAAGGAA      2400
     GCAATCAATA CAATGACAAA GAATTGCGAT CATGGAAAAC TGAAAGCAAT CCTAGAGGCA      2460
     GGAACATTTA AGACAATGGA CGAAGCAATA AGTAAATACA TCCATTGCAG CACTGAGATG      2520
     ACAGGAAGTG CAAGTTCCGT TTTGTTTTAC AAGAGAGGAC AAGGAAGTTA CACCAGAGGT      2580
     AACTACCGAG GACGAGGAAA TGGTCGAGGT GGTAATAATA GAAATAATTA TAACCAGAAC      2640
     ACCGGCCAAT ACAACAACTT TAATAATTAT AACAATAGCA ATGGCAGAGG ACGAGGAGGA      2700
     TATAGAGAAT ATAACTACCA GAACAGAGGC GGTGGTAACT ATAACAACCA AAACCGCAAT      2760
     TTCTCAAGTT ATAGCCAAAA TGGTAATGTC AGACATGCAC AAGGCACGTC GGAAAACCAG      2820
     CAGGCTCCCT TAGGGCATCA AGAACAGTAA AACAAAAGGT TCATACCATC AATCTTAATC      2880
     TAAATATTTT CATTAAAGTA AAAAATGAAC ACACAAATAA GATACTTACA TTTCTAGTAG      2940
     ACACAGGCGC CGATATATCA GTCATTAAAG AAAACTCAGA TGAACTTTTG AATCTTGATC      3000
     ATAATAATAT AACACAAATT ACAGGAATTG GAAAGGGTTC AATAAATTCA ATAGGTTTAA      3060
     CACTTCTCGA GATGAGAACC GGTAACTATA TAGTACCGCA CAATTTTCAT GTTGTGGACG      3120
     ACAATTTTCC GATCCCTGGT GACGGAATAG TTGGAATCGA CTTCATAAAA ACATTCAATT      3180
     GCCAATTAGA TTTTACTACA GAAAGTGATT TTTTCATTCT AAGACCAAAC AATATTAAAC      3240
     AAGCGATACA AATACCAATT TTTCATAATA TCGATAACAC TGAGATAACC ATACCATCTC      3300
     GTTGTGAGGT TATTAGGCAA ATTACCGTAA GTTCGGTGGA TAACCAAATT CTAATACCCA      3360
     ATCAGGAAAT AGAAGATGGT GTATTTGTCG GAAATTCGAT ATCAGATTCA AAAAACACGT      3420
     ACATCCGAAT ACTAAACACA ACTAACAGCA ATAAAATTTT AAATGTAAAC AAAATCAATT      3480
     TTGAACCATT AACTAGCTAC AAAATAGCAG ACCTAAACGA CTCCATAAGA GCCGAATCAA      3540
     TTTTAAGCAG ATTAAAGAAA AACTTTCCAT CTGCACATAA GAAAATGTTG ACTGAACTGT      3600
     GTTCACAATA TACTGATATT TTTGGATTGG AGACAGAGCC AATCACTACA AATAAATTTT      3660
     ACAAACAAAA GATAAGATTG AGAGATGATG AACCAAGCTA TATTAAGAAC TATAGAACAC      3720
     CCCATTCACA ACAAGCCGAA ATATCGAGAC AGGTAACTAA ATTAATAGAA GACAAGATAG      3780
     TAGAACCAGC TGTATCTGAA TACAATAGCC CATTATTGCT AGTTCCAAAG AAATCCTTAC      3840
     CGGATTCAAA AGAAAAAAAA TGGCGTTTAG TGATAGACTA TCGCCAAATA AATAAAAAGT      3900
     TGTTAGCTGA CAAGTTCCCC TTGCCAAGAA TAGATGACAT ACTTGATCAA TTAGGCCGAG      3960
     CAAAATATTT CTCGTGCCTG GATCTTATGT CGGGATTCCA TCAAATAGAG TTAGAAGAAG      4020
     ATTCTCGAAA TATAACATCC TTTTCTACGA GCAGTGGCTC TTATCGCTTC ACGCGACTAC      4080
     CATACGGATT AAAAATAGCT CCAAATTCCT TTCAACGAAT GATGACAATG GCATTTACAG      4140
     GTCTGGAACC ATCTCAAGCA TTTCTGTACA TGGATGACTT AATTGTCATA GGCTGTTCTG      4200
     AAAAACACAT GACCAAGAAT CTTACAAATG TTTTTGAACT ATGCAGGAAA AACAACCTCA      4260
     AACTGCATCC AGATAAGTGC TCATTTTTCA TGAGTGAAGT CACTTTTCTT GGACACAAAT      4320
     GTACTGATAA AGGCATATTG CCTGACGATA CTAAATATGA TGCTATACAG AGATATCCAG      4380
     TTCCTACTGA CGCAGACAGT GCCAGAAGAT TCGTAGCATT TTGTAACTAT TATAGACGTT      4440
     TTATACAAAA TTTTGCAGAT TATTCCCGTC ACATAACAAG ATTATGTAAG AAAAATGTAA      4500
     AGTTCGAATG GACAGCTGAT TGCCAGCATG CCTTCGAACA CCTGAAAAAA CAACTAATGA      4560
     ATCCAACTTT GCTGAAATAC CCCGACTTTA GCAAAGAGTT CTGTATTATA ACTGATGCAA      4620
     GCAAAGAGGC ATGCGGAGCG GTACTGACCC AGAACTATAA TGGTATCCAT TTGCCAGTAG      4680
     CTTATGCATC CCGTAGCTTC ACTAAGGGTG AGAGCAACAA GTCAACAACA GAGCAAGAGT      4740
     TGTCAGCAAT ACATTGGGCG ATAAATCATT TCAAACCATA TATATATGGT AGACACTTCA      4800
     CCGTCAAAAC AGATCACAGA CCGTTAACAT ACTTGTTCTC GATGGTTAAT CCAAGCTCAA      4860
     AACTGACCAG AATGAGGCTT GATTTAGAAG AATATGAATT TACTGTGGAA TATCTTAAGG      4920
     GAAAAGACAA TTACGTAGCA GATGCGTTAT CCAGAATAAC CATCGACCAA CTAAAAAATA      4980
     TATCCAAACA AGTACTTAAA GTCACTACAA GAAATCAAAG TAGACAGGAA TCCTGCGCAG      5040
     GAAAAGGAAA TAAAAATGAT AAAGTAGAAT TGCCTAAGCA AACTACTCAA GAAGCTTCTA      5100
     AGCCCAAAGT ATACGGAGTC ATTAATAATG ACGAAGTACG CAAAGTAGTG ACATTGCATG      5160
     TAAATAATAT GATATGTTTT TTTAAACATG AAAAAAAAAT TACTGCAAGA TACAACGTTG      5220
     AAGATTTGTA TATTAATGGA ACTCTCGACT TAGGTCAATT TTTCCACAGG CTTGAAAAGC      5280
     AGGCCGGTAT GCATAATATC AATCAACTTA AAATGGCACC GTGGGAAAAT ATCTTTGATA      5340
     ACATTTCAAT AGATACATTT AAGAAAATGG GCAATAAAAC ATTAAAACTA TTAAGAGTAG      5400
     CGCTACTCAA CCCGGTGACC TTAGTGAATA CAAAGAAAGA AAAAGAAGCA ATCCTGTCTA      5460
     CACACCACGA CGATCCAACA CAAGGAGGAC ACGCAGGCAT TACAAAAACC CTGGCCAGGA      5520
     TTAAAAGACA TTACTTTTGG AAAGGTATGA CTCGGGAAAT AACAGAGTAC ATACGGAAAT      5580
     GTCCAAAATG CCAAAAAGCT AAAATTATGA AACACACAAA AACTCCTTTA TCAATTACAG      5640
     AGACACCAAT AAGCGCATTT GACAGAGTCA TAGTGGATAC GATAGGTCCA CTACCAAAGT      5700
     CAGAAAACGG TAATGAATAT GCTGTTACAC TTATATGCGA CCTGACAAAA TATTTGGTAA      5760
     CCATTCCAAT CGCAAATAAA AGCGCAAATA CAGTAGCGAA AGCAATATTT GAATCCTTTG      5820
     TACTAAAGTT CGGTCCAATG AAGACGTTCA TTTCGGACAT GGGAACTGAA TACAGAAATT      5880
     CAATTATCAA AGACTTATGC AAATACCTGA AAGTAGAAAA TATAACTTCT TCAGCACACC      5940
     ATCATCAGAC GGTAGGAACA GTGGAAAGAA GTCATAGAAC TTTTAACGAA TACATCCGGT      6000
     CATACATATC GGTTGATAAA ACTGACTGGG ACGTATGGAT AAAATATTTC GAATTTTGTT      6060
     TTAATACTAC ACCATCTATG GCACATAATT ATTGTCCATA TGAGTTGATT TTCGGTAAAA      6120
     CATGCAATTT ACCAAAGCAT TTTAATAGCA CGGATAGAAT AGAACCCATT TATAATATAG      6180
     AAGACTATCC TAAAGAAAGT AAATATAGGT TAGAAGTAGC ATATAACAGA GCAAGAATTA      6240
     TGCTCGAAGA ACAGAAGAAA AAGAATAAAG AATTATATGA CTTAAAATTA AACGATATAA      6300
     GTATATCAAT AGGAGATAAG GTGTTATTAA AAAACGAAAC CGGACATAAA TTAGATTTCA      6360
     AATATACTGG ACCATATACG GTAGTAAAGA TTGAAGAAAG GGATAATATA GTAATATCAA      6420
     ATGATAAGAA AAAACCACAA ACGGTACATA AGGATAGGTT AAAATTGTTT AGTTCTTAAA      6480
     AAAAAAAAAT AAATAATATG GTGGCCACCA GCAAAAAAAA AAAATATATA TAGAGAAAAG      6540
     AGTTAACCCC ACATAAGTGC ATTGAATGTA AGAAAACATT TTTCTTTTAT CATCTTTGAT      6600
     GGTTGAACGA TTATAAACTA AAAATTTGAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA      6660
     ACCAAAAAAA AACCCCCAAG AACACGTATG TTTGTACAAA ATGTTCCTTA AATTTCCTTA      6720
     ACATTAAAAT TACTTCCTTA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAT ATATATATAT      6780
     AAAATTTTTA ATTATAAAAT AACTTCATAA AATTACGTTA TTTTCCAAAA GGAGGGAGAT      6840
     GTAATGTGCA CACATATCGA ATAAGCACTG TATCAAATCA GAACATTGGG AACAATCACA      6900
     TTGTAGCACT TTTGCAACAA TGTTTATGTA AGACTTTTCA GTTCCCAGGC ATATCTTGAG      6960
     TGCTCAGCAA TCTGACCACA CAAGAATGCT ATTCAGACCA GAAGTGCAGA GTCAGCATAA      7020
     TTAGCATGCG CGACTGCTCG ATCTTTATGT CCACATGACT CTCTTAGACA GCGGCGCTCT      7080
     CGCTGCCAAA GTTAAGTACA TAAGAGCAAA GCAACGTCTC TGCCGACGGC CTCTCTGCCG      7140
     GCGCAGACGG ATTGCATTTG GCTAGCTTGG ACTCTTCTAG ACCAAGTACA AGGCAGTCGT      7200
     AAAGGAGTCG TCAAAGAGCC TTCAACATGT CCTAATTGAA TATTAATGAG TCTTAACAGA      7260
     AGTTACAATT TTACTGATAT CATACTGAAT CTCTATTTCA ATAAAAGTAA TATAAAGAAC      7320
     ACAAAAATGC ATTACAATTA TTACA                                            7345
//
ID   STALKER    standard; DNA; INV; 7256 BP.
XX
AC   AF420242;
XX
DR   FLYBASE; FBgn0003519; Stalker.
XX
FT   source          AF420242:..
FT   SO_feature      five_prime_LTR ; SO:0000425:1..406
FT   SO_feature      three_prime_LTR ; SO:0000426:6849..7256
XX
CC   Sequence from BDGP, September 2001.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7256 BP; 2795 A; 1329 C; 1243 G; 1889 T; 0 other;
     TGTAGCATAT TGGACTAATC TACCCTAAGA ATACAATAGA TGATTGGGTA TAACATAGCG        60
     TCAATACATT GTGACACTTT GTCATAATAA ATATAAATAT ACAAATATAC AAAAAGACCA       120
     CCAAAAACTA CGTAAGCACT CCAGCGCCCC AGTAATACGA TCTAACGCTT ATACATAAGC       180
     CGATCGCGGA GCGTGGGAAT GCTGAGCATG CACTTTGCAG CTCAAGTGGT CAATGCCTTC       240
     TGCATGCATA TGTATATGTA TAAATGTAAG TAAGAATACA TAGATATAAG CAATGTATGT       300
     GCGGGTTAGC TGAACCCAAC TTCAGCACAC TTTGATCATT CGAATAAACA GATTCAAACA       360
     GAGCAGAGGT TCTGAGCTCG GAAAGCAAAT CTATTACATC TATTACATGG CGACCGTGAC       420
     TCGGTCTCGA GTCTGTCTCT GTGTTGTGTG TGTCCGTGTA TGTGCGAGGG TCTTTAAACG       480
     GTGCTAACTG TGCTGCAAGC GATGTTCGCG CTGCCTGCTG CATTTTCTAA TAAAATGCGT       540
     TTGAGTAAAA CAAGATAACT GTGCACCAAA CCAGATTGTG TGGCATGCCA CGTGTAGCAG       600
     CTGATGACCA GACAGCAAAA CGATCAGCAA GCACCAAACG CACAAAAACA CACAGACACA       660
     AGCGGCAATT GATGGCAGAC GAGCCACAAT TGACCGAGGC GCAACCCGAG GTACAGAGGG       720
     ACCAGCCAAC GTTGGGAGAA GCACTGGAAT TAAACCCCGC CGATGGACCG CGCCCACTCA       780
     CAATAGCTGA GTACCGGGCA CGTCAGGAGA AGCGCCAACC CAGGAAACAT AAACGCTCTG       840
     GACGTAGAGT GAAATTACTA CAACAACGCC GACTGGTCAA GGAAATGACC CAGTTGGCCA       900
     AGGAGGAATC ATCCCGACAA CGCTACAAAG AGCGTCTTGA GGACATCGAA AGCAAGATTT       960
     CGCAAGGTGC GAAACAACGC AAACGGGCTG CATAAATAAA TGCCAATGCC CCAATTTGCT      1020
     TTAGATTTAA TTTCTACCCC AAGCCGATGC GGGAAACCGC TGCTTGGAAA ATACTAAAAT      1080
     CTGTTAGGCT TTTTCACTAA CAATGTGGTT GGAGAATTTT TTTTTATTAT TGTAAACGAC      1140
     TATGTGAGCC AACCACATAT ATTAACCATT AATATTTCCA CGTCTCTGGC ACTGAGTATA      1200
     CATATATACT CAGCTGCAAA ATGTTATTTG TGTAAAATGA CAACAATGAA AAAAGTTCTT      1260
     ATTTTGACTA ATATAAAAGA AAATATTAAT TTCATTTTTC CGATTTTCAA GAAGAAAATA      1320
     TTTTTCCTTC CTTTAAGCTC CAAATAGAAT ATCTTATTTT TTTTCCTTTT TTTTAAAGAT      1380
     CCGTTTCATT GAATATAGAT AAAATGGGAT GGTTTAGCGA TTCTAGTGAG GCAAAGGACA      1440
     ATACTGCCAA CGTAGTTAAT AACGTAAAAA TTATAGATCA CACAGACGAT ATAAATGCGT      1500
     TGTGGATCTT ATTGCTGATC ATTACAATAG TACTACTTCT ACAATTTCTG CTTACAATTT      1560
     ATGTTAAGCA TAACAAGATC ATCAAAAGAC GTTATATAAA TAGGGCAAAT CGTTTAGACC      1620
     AGATTTAAAA AAAAAATAAT ATGGATTAGA AGAAAGCTTA ATAAAAACTT TTTTTTTTAC      1680
     GACAAGAATG GAATGGAGCG AAATAGCGAT ACGAATAGAC GAATTTCGCT TCAGGTTCGA      1740
     TAAGTCTTAT AAATGTATCA ATAGAGACGC AGTAATAAAA TCCGAAACTT TGAAAAATCA      1800
     TATAGAGATA TTAGTAGGAG AATATAATAA TATAGTTACA TTAGTAAATA AATATGCAAA      1860
     TAGGCTCACA TCTGAACATA ATAACAAATG TTTGAGGGTT ATAAAATCCC TAAACACAAG      1920
     ATTAAATAAC ATCAGAAAAA GAAGGCATAT TCTGATAGAT GTACCAGAAA GTCTAAGTCA      1980
     ATTGGTTGAA TTCAACACAG ACCAGTTCAA AGAACTAGAC GAATCTGTTC AATCAAGCGG      2040
     CGCTGAGTCC GATAGTGACA TTGAAACGCT AGAAGGAAGC GACCGAATTG AATTTAAATC      2100
     TGAACCAATA AAAATTTCTG AGATGGCACA GACATTGATA GAATTTATCA GGCTAGCCAC      2160
     ATCTCTGATA CCAGAGTTTG ATGGTAAACC AGAAAATCTA CAAAGTTTTT TGGATGCTCT      2220
     AGGTCTACTA GATAGCTTAA AGAGCACACA TGAAACGACA GCAGTAAGCC TAATAAAAAC      2280
     TAAACTTAAA GGCCATGTAA GAAACCTTAT AAGTAATGAG CAGACGATTG CTGCAATCAT      2340
     TACCCAACTG TCAAGTGCAG TAAAAGGAGA ATCGGTAGAA GTGATATCTG CCAAGCTTCT      2400
     GAATCTACAA CAGAGAAATA AAACGGCTAA CCAATACACC CAAGAGGTGG AGAAACTGAC      2460
     AAAGGCCCTT GAAGGTGCCT ATATCAGTGA AGGTCTCAGC CAGTCCTTAG CAAATAAATA      2520
     CAGCACTACA ACAGCTGTAA AAGCAATGAC ACAGAATTGC TCCATTGATA AGGTAAAACT      2580
     TATCATGCAA GCAGGCACAT TCACAAACAT GAATGATGCC ATCTCCAAAT TTGTAAACAG      2640
     TTGCACAGAG ATAACAGGTC AAAGTAACAC TGTACTCTAT TATCGACGAG GTGCAAATAA      2700
     TTATAATAGA GGCGCCCGGG GTTATAATCG TGGTAGAAAT ATCAACCACA ACAATTACAA      2760
     CCGGGGTAGC AATAACAACA ATAATAATAA CTATAATAAC CGTGGAGGTA GGCGAGGCCA      2820
     AAACCAAGGG AGAGGCCGCG GAAACTACAA CCATGGTAAT AATAATAATA GCAGTGTGAG      2880
     AATCGCGCAA AATACGTCGG AAAACTAACA GAACCCTTTA GGAAACAACC AATAAATGTA      2940
     AAAGTTCATT CCATCAATTA TAGTCTTAAT ATATTCGTAA CCTTCTATAA TCATTCAACT      3000
     GAAAATAAAC TAACATTTCT CATAGATACT GGTGCAGATA TCTCACTTTT GAAAGTAAAT      3060
     TCTGATAACT TCGTAATTCA AAATGAAAAA ATAATAAACA TCGAAGGCAT AGGCCAAGGT      3120
     GTGATAAAGT CTCAAGGAAC AACCTTAATA GAACTCCAAT CAAAAAAATA TATTATCCCA      3180
     CATGAATTTC ATTTGGTAAA CCCAAATTTT GCAATACCAT GTGATGGAAT AATAGGCATT      3240
     GATTTTATAA AGAAATTCAA TTGTCAACTA GATTTCAAAC CAAGTGAAGA CTGGTTTATA      3300
     ATTAGACCCC AAAATTTAAA TTATCCAATA TATGTCCCGA TAACATATAG CGCTGGCAAC      3360
     AATACAGTTC TTCTGCCAGC CAGATCACAA GTTATTCGGA AAATAGACAT TAATGTTGTA      3420
     AATGATTTCA TATTTGTTCC TAATCAAGAA ATACACAATG GGATTTATGT TGCAAATACA      3480
     ATAGCAGCAT CCAAACATGT ATACGTTCGA CTTCTAAATA CAACTAATTT CGACCAAGTG      3540
     GTCAAAGTAA ATAAAATACA ATATGAAAAT CTAAAAGATT ATGACATTCA TAATACCGAC      3600
     ACTGGAAATA GAAGCGAACA AATACTTTCA AAACTAAAGA AAAATTTTCC AGACCAATTT      3660
     AAAAATCAAT TAACAGAATT ATGCACACAG TATAGTGATG TGTTCGGACT GGAAACCGAA      3720
     CCTATATCAA CAAATAATTT TTATAAACAA ACATTAAGAC TTAAAGATGA TGAACCCATT      3780
     TATATAAAAA ACTATAGAAG CCCGCATAGC CATATTGAGG AAATTCAAAA ACAAGTAGGG      3840
     AAATTAATAA GCGACAAAAT CGTCGAACCG TCTGTATCTG AGTATAACAG CCCACTCTTG      3900
     CTAGTTCCAA AAAAATCATT ACCAAATTCA CAAGAGAAAA AATGGCGATT AGTAATTGAC      3960
     TATCGTCAAA TAAACAAAAA ACTTCTTTCG GACAAATTTC CACTCCCTAG AATTGATGAC      4020
     ATTTTAGATC AACTAGGTCG AGCTAAATAC TTTTCATGCC TTGACTTGAT GTCAGGTTTC      4080
     CATCAAATAG AACTTGAGGA AAACTCTAGG AATATAACAT CTTTTTCAAC GAGCAATGGC      4140
     TCATATCGCT TCACGCGATT ACCATTTGGT CTTAAAATAG CACCAAATTC ATTTCAGAGG      4200
     ATGATGACTA TATCATTCTC GGGATTAGAA CCCTCTCAGG CATTCCTTTA CATGGATGAC      4260
     TTAATGGTGA TAGGATGTTC CGAAAAACAC ATGATTAAAA ACTTAACTGA CGTTTTTAAT      4320
     GTATGTAGGA AATATAACCT AAAGTTGCAT CCAGAAAAAT GTTCATTTTT CATGCACGAA      4380
     GTGACATTCC TAGGTCACAA ATGCACAGAC AAAGGAGTAT TGCCAGATGA CAAGAAATAT      4440
     GACGTCATCA AAAATTATCC TGTCCCTCAT GATGCGGACA GTGCAAGACG ATTTGTAGCA      4500
     TTCTGCAACT ATTATCGTCG ATTTATAAGG AACTTCGCCG ACTATTCACG GCACATAACT      4560
     AGATTATGTA AAAAGAATGT CCCTTTTGAA TGGTCAAGCG AATACCAGAA CGCATTCGAA      4620
     TACCTAAAAG AAAATCTTAT GTACCCCACA CTATTACAAT ATCCTGATTT TCGCAAAGAA      4680
     TTTTGCATTA TAACGGATGC TAGTAAACAA GCTTGCGGAG CGGTTCTAAC TCAGAACCGA      4740
     AACGGGATTC AGCTCCCAAT AGCTTATGCA TCACGTTCAT TTACAAAAGG AGAAAGCAAT      4800
     AAGAGTACAA CGGAACAAGA ACTAGCGGCA ATCCATTGGG CAATTACCCA TTTTAGACCA      4860
     TACATTTATG GCAAGCATTT CACCATTAAA ACGGACCACA GACCATTAAC GTACCTATTT      4920
     TCTATGACTA ATCCCAGTTC TAAATTAACT CGCATGCGGC TAGAACTAGA AGAATACGAC      4980
     TTCACAGTAG AATACCTAAG GGGGAAAGAT AATTTTGTAG CAGACGCACT CTCACGTATA      5040
     AATATAAAGG AACTCAAAGA CATGCAACAT AAAGTCCTGA AAGTCACTAC TAGGCAACAA      5100
     AGTAGACAAG AAAACTGTAC AGTAACAAAC AAGGAACTAT TGCCTAGGCA AAGTATCCAA      5160
     AATGTATCTA AGCCCAACGT ACACGAAGTC ATAACAAATG ATGAAGTACG AAAAGTAGTG      5220
     ACCTTGCGAA TAACTGAATC TATTTGTTTA CTAAAACGAG GAAATAAAGT TATTGCAAGA      5280
     ATTGATGTTG ACGATTTATA TACCAATGGA ATTTTTGATT TAGGTCAGTT CTTCCAAAGG      5340
     CTTGAAATGC AAGCCGGTAT ACTAAAAATC AGCCAACTCA AATTGGCACC GAGTGAAAAA      5400
     ATCTTTGAAA CCATTTCAAT AGATAATTTC AAAAATATGG GCAATATAAA ATTGAAAACA      5460
     TTAAGAGTAG CGCTACTCCA GCCGGTGACC ATTATAAAAA CTGAAAAAGA GATACAATCG      5520
     ATACTGTCTA CATATCATGA CGATCCAATT CAAGGAGGTC ATACAGGCAT TACAAGAACG      5580
     CTAGCGAAAA TAAAAAGACA CTATTATTGG AAAAATATGA CTCGTCATAT AAAAGAGTAC      5640
     ATACGTAGAT GTCATAAATG CCAAATGTCA AAAACAACGA CACATACAAA GACCCCATTG      5700
     ACTTACACAG AAACCCCAAC AAATGCTTTT GATATAGTGA TAGTGGACAC AGTTGGTCCA      5760
     CTACCGAAAT CAGAATATGG CAACGAATAC ATCGTCACAC TAATATGTGA TTTGACGAAG      5820
     TATCTAGTAA CCATACCTGT TGCGAATAAG AGCGCAAATA CTGTCGCAAA AGCTATATTC      5880
     GAAAATTTTA TACTAAAGTA CGGTCCAATG AAGACGTTCA TTTCGGACAT GGGTACCGAG      5940
     TATAAAAACA ATGTAATTCA AGATATGTGT AAATATATGA AAATTGAAAA TCTTACATCC      6000
     ACTGCATATC ACCACCAGAC TTTAGGGACA ATCGAACGAA GTCATAGAAC ATTCAATGAA      6060
     TACATTCGTT CATACATCTC TGCAGATAAA ACTGATTGGG ACGTTTGGAT ACAATACTTT      6120
     ACATATTGTT TCAACACAAC ACCATCAGTC ATGCATAATT ACTGTCCATA TGAACTAGTC      6180
     TTTGGAAGAT TACCAAGGCA GTTCGCAAAT TTTAATAAAA CAGATAGAAT AGAACCACTG      6240
     TATAATATAG AAGATTACTC AAAGGAAATA AAATTTAGAT TAGAAATAGC ATATAAAAGA      6300
     GCTAGACTTT TGTTAGAAAA AGCTAAGTCT TATAGAAAAC AATTTTATGA TAAGAAAACT      6360
     TCAGATTTTC AATTAAAAAT AGGAGATAAA GTTATACTAA GGAACGAATC GGGTCATAAG      6420
     TTAGATCCAG TATATATAGG CCCTTATACT GTAGAAACCA TAGAAGACAG AGATAACATA      6480
     GTAATTAGAG ATACAAAACA AAAGAAGCAA AAAGTACATA AGGATAGACT AAAAATATAT      6540
     AATCAATGAA ACGTTTCATT TCACTTAAGA AAAGGTCTGA TCAACCTCAA AACAAAAAAA      6600
     AAAACACAAA AAAAAATTTA ATTATTATTT TTCCTTCTAA GAAAGTTAAA CATAAATCCA      6660
     AAAACATCGT AATTCAACAT ACATTTTTTG TATTATTCTG TCATTATACA AAAATGCTTT      6720
     GAGACAAAAC ATTGCTAATA ATTAATAAGA AAAATCAATT TCAAAAAAAA TTTTTTCCTT      6780
     TCTAAACACA ATATTAATAT TGAGAACTCA ATGACTACAT ATATTACGTC ATTTCTTTAA      6840
     AAAGGGAGGT GTAGCATATT GGACTAATCT ACCCTAAGAA TACAATAGAT GATTGGGTAT      6900
     AACATAGCGT CAATACATTG TGACACTTTG TCATAATAAA TATAAATATA CAAATATACA      6960
     AAAAGACCAC CAAAAACTAC GTAAGCACTC CAGCGCCCCA GTAATACGAT CTAACGCTTA      7020
     TACATAAGCC GATCGCGGAG CGTGGGAATG CTGAGCATGC ACTTTGCAGC TCAAGTGGTC      7080
     AATGCCTTCT GCATGCATAT GTATATGTAT AAATGTAAGT AAGAATACAT AGATATAAGC      7140
     AATGTATGTG CGGGTTAGCT GAACCCAACT TCAGCACACT TTGATCATTC GAATAAACAG      7200
     ATTCAAACAG AGCAGAGGTT CTGAGCTCGG AAAGCAAATC TATTACATCT ATTACA          7256
//
ID   INE1    standard; DNA; INV; 611 BP.
XX
AC   U66884;
XX
DR   FLYBASE; FBgn0026416; INE-1.
XX
SY   synonym: mini-me
SY   synonym: DINE
SY   synonym: narep1
SY   synonym: Dr. D
XX
FT   source          U66884:4880..15490
XX
CC   This is presumably a dead element.
CC   Derived from U66884 (e1371475) (Rel. 52, Last updated, Version 6).
CC   Michael Ashburner, 28-Sep-2001.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 611 BP; 193 A; 123 C; 93 G; 202 T; 0 other;
     TATACCCGTT ACTAGATTCG TTGAAATGAA TGTAACAGGC AGAAGGAAGC GTCTTAGACC        60
     ATATATAGTA TATACATACA TGTATATTCT TGATCAGGAT CAATAGCCGA GTCGATCTTG       120
     CCATATCCGT CTGTCCGTAT GAACGTCGAG ATCTCAGGAA CTATAAAAGC TAGAAGGTTT       180
     AGATTCAGCA TACAGAGACA AAGACGCAAG TAGCCATGCC CACTCTAACG TCCACAAACA       240
     GCGCAAAACT ATCACGCCCA CACTTTTGAA AAATGTGTTG TTCTTTTCAC ATTCTGATTA       300
     GTCTTTTACA TTTCTATCGA TTTCCAAAAA AAAACTTTTT GCCAACGCCC TAAAACCGCC       360
     CAAAACTCCG ACACCCACAT TTGTAAAAAA TTGTTGGGAA TTTTTTTCAT AAATTTATTA       420
     GTTTATTATT TATTATAAAT TTAAGTTTAT ATCGATTTGC CGACAACATA TTTTAATTTT       480
     TTTTCTCATT TTATCTTTTA TCTATCGATA TCCCAGAAAA ATTGTGCAAT TTCGCATTCA       540
     CACTAGCTGA GTAACGGGTA TCTGATAGTC GGGAAACTCG ACTATAGCAT TCTCTCTTTT       600
     TGAAATTGCG G                                                            611
//
ID   GTWIN    standard; DNA; INV; 7411 BP.
XX
AC   AC006215;
XX
DR   FLYBASE; FBgn0063436; gtwin.
XX
SY   synonym: hamilton
XX
FT   source          AC006215:36795..44204
FT   SO_feature      five_prime_LTR ; SO:0000425:1..494
FT   SO_feature      three_prime_LTR ; SO:0000426:6917..7410
FT   SO_feature      CDS ; SO:0000316:981..2357
FT   SO_feature      CDS ; SO:0000316:2729..5392
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
XX
SQ   Sequence 7411 BP; 2298 A; 1753 C; 1619 G; 1741 T; 0 other;
     AGTTAACAAC TAAGAGCACA CACTATTAAG AGCACACATA TAACAAATTA ATTAATATAA        60
     ACAATGCTGA CGCGCCCAAA CTGAGTTCAG CGCTCTGCGC CACGAACGGT CAGCAACAGC       120
     AATCGGACAC CCCTTATCCG GGGTACCGAG CTATGTTGCA TAAATGCTGA GTCGGCTTGC       180
     CGACCATGGC TTTATGGCGT GATGCATTGG AGCCACAGTA GATTTACATT TTCATATTCT       240
     TTTGTATTCA GTCTTAAGCC AGAGCTTTAA TAAAGAGCAG CTATTCACTC CGGCTCGCAG       300
     CCGTAAAATA TCATTTTATT ATTTGAACAT TCTCGCTGAG CCAAAAGGCC AGCGATCGAC       360
     AAAGAGGGCA AAGTCACGCC CTCCGACATA AACTTCATAA GAAGATATTA TCCTATTGTC       420
     CCTGGTAGCA GCCAGCACCA GATCTCCACC GCCTGGAGAC CACCGGACAC ATCCCGAAGG       480
     AGGAACACAT TAATTGGCGC CCAACGTGCA TTTGAACCTG CACCTAGTTA TATCTTAACA       540
     TAACACTTAG TTGAGAATAC AAGCCATGTA AGTTTGATTA ATGAAGTCAC TCGGCAACCT       600
     TAAGAATTTA GTGTGGAATA TTAAATAAAT AAAAAAAGCT AACAGCCATT TCTTTGCATG       660
     CTTTTAGGGA GCATTATTTT CCACAGCATA CTTTTACCAA GTTACAATTC TGTAGCATAC       720
     CCCAAGTTAC CCGCTCGTTT CAATTGCATA CTTTTACCAA GCGTAAATTC TACAGCATAC       780
     CCTAGGTTAC TTTGAACTAC TGCCCAAACG AATTAATAAG AAATAATTAT TTCTTCTGCG       840
     CATACTTTTT CCTTGTTTGT TTGTAGGGAT TTCCTTTTCC TTTGTGTCGC CTTCTATTTC       900
     TCGCGTGTGC AAATATCGCG CCTCGTATGG CCGATCAACC GTGTTCGGAA AGAATTAAAT       960
     TGCGTGGTGT CAACCAATAA ATGAGTTGGA CGGCATATAG AGACATAAAA GTCGAGCGCA      1020
     ATAGTGACGG CGAGTTTGAT TTAGAGCCCG TAGGTTTTTG TCCGAATACT ACAAATAGCA      1080
     CTGCAGCCAT GGACGCCGCA CAGCTTCAAG CTATTATAGC GGGAGCCGTT AACCAGGCTT      1140
     TGACTGAGCA GGAAAACAGA CTTAAGAGGG ATTTCCAGGC GCAATTAGAT GAGGTAAAAC      1200
     AACAGATGCA ACACTTGCGT GTGGAAGCAC CACAAGTAGA GACATACCAA AAAATAACCG      1260
     CAGGCCCGGA AGTACGGTGC GACATCAAGC TTGACATTGT GAAGACAATG CCAGACTTTT      1320
     CGGGAGAGCA GGATGACTAT GTGTCATGGC GGCAGTCAGC CGTGGACGCA TACGAGATCT      1380
     TCAAACGATA TAATGGTAGC GAGGCGCATT ACCAGGCCGT TTCGATTATC AGAAACAAAA      1440
     TTAGGGGGCC AGCAAGAGGG CTGCTAGTTG CCCATAACAC AGTCCTAAAT TTCGATGCCA      1500
     TTATTGCTCG ACTAGACTGC ACCTACGCGG ACAAAACGTC GCTGCGTGTA CTTAGGCAAG      1560
     GACTCGACAC AGTTAGGCAA GGGGAGCTTA GCCTCATGCA ATATTACGAC GATGTAGAGA      1620
     AACGGTTGAC ATTAATAACA AACAAGATAG TTATGACTCA CGAACCGGAC AGTGCTATTC      1680
     TTTTTAATAA TGAAGTTAGA GAGGATGCTC TCCACGCGTT CATTGCCGGT CTAAGGAAGC      1740
     CCTTGAGGGC CATAGTCTTG CCGGCGCAAC CCAAGGATTT GCCCTCAGCT TTAGCTTTGG      1800
     CTAGGGAATC CGAGGCTACC ATAGAACGCA CTAACTTTGC CGCTACATAC GCAAAGGCTC      1860
     TAGAGGACAA GGCAATCACC TATGAGCACC GAAAAGATCG GAACCACTCA AGGGAACCGC      1920
     ATGGGAGATA TAGCAGGGCC GAGGACAGCC AAGGGAAAAA CCCTCATTTT TACAAGAAAC      1980
     AGGGTAGACA AAATAATTCT GCCCAGAATA ATAACAGCTA CCGGAATCAG TCACCTGAGC      2040
     CTATGGAGTT AGGCTCCACT GTAACCCAAC ATAGGCAACC GACCTCCTTC GGAAGCGGTC      2100
     AGCCTGCTAG CGTCAAGGCC GAGGGTGCTC GTGGCCAGAA GAGATTCGGC TCCGCACGCA      2160
     TGACTGGTCA AAGGCGTCAG AGGGTGCAGA ACACCATCCA ACAGGCTGAC GATAAAAACG      2220
     ACAGCGAATA TGAGGGCGCG GCCGCAGCGG CCGTTACCGA GATAGATGAC GAGTCTGATG      2280
     AAAATGATCA GATCAATTTT TTAGGGAGCG CTCCCGACTG CCGTTCATTG AACGCCAGTT      2340
     CCATGGGAGG AAATTGAGAA TTTTAATAGA CACAGGGGCG GCGAAAAACT ACATCAAGCC      2400
     CGTAAAGGAG CTAAAAAATG TGGTGCCGGT CAATTCCCCT TTCACAGTTA GTTCCATCCA      2460
     CGGTTCTAAC ACAGTCAAAC AGAAATGTTT AGTTAACATT TTCGGGAAAA CAGCGGATTT      2520
     TTTCCTTTTG GACACGTTAA CACTTTTCGA TGGCATTATT GGATTTGATT TTCTAGCTCA      2580
     AGTTGGAGCA AAGCTAGACA CAGAAAAAGG CACAATCAAC TATGGTTCTG TTGTTGAAGA      2640
     GCTACAGCAT CATAGTTGCG ACGAGGTAAA TTTCACTAAC GTGAATGACG CTACGGTGCC      2700
     AGAATCTGTA AAAACTGAGT TTACAGCCAT GATCGCAAAC AGATCTAAGG CATTTTCAGC      2760
     CTCTAACGAG GCACTGCCGT TTAATACTTC TGTTGTTGCC ACAATTCGCA CAAGCGATGA      2820
     TAAGCCAGTA TATTCCAAAT TATACCCGCA CCCCATGGGT GTCTCTGAAT TTGTTAAGCG      2880
     AGAAATCGCA GACTTACTGC AGAAAGGCAT TATTAGAACC TCAAGGTCGC CGTACAACAA      2940
     TCCAACATGG GTTGTTGACA AAAAAGGCCA TGACGAACAG GGGAACAAAA ATAAGCGTTT      3000
     GGTTATAGAC TTTAGGAAAC TTAACGAAAA AACCATCGCT GATAAGTACC CAATGCCAAA      3060
     CATCCCCATG ATACTGGCAA ATTTAGGAAA AGCCAAGTAC TTCACAACAT TAGATTTGAA      3120
     GTCCGGCTAC CACCAGATAT ACTTGGCCGA ACATGACCGT GAAAAGACCT CCTTTTCGGT      3180
     GAACGGCGGA AAGTATGAAT TTTGTCGATT ACCGTTCGGA TTGAAGAATG CGGGAAGCAT      3240
     CTTCCAAAGA GCGATCGACG ATATCCTACG GGAACAAATT GGCAAGTCAT GCTACGTTTA      3300
     TGTAGATGAC GTCATTATTT TTTCTGAAAA TGAAAACGAC CATGTTAAGC ACATAGATTG      3360
     GGTCTTAAAA AGCCTGTGTG ATGCCAACAT GAAGGTGTCC AACGAGAAGA CGCACTTTTT      3420
     TAAGCAAAGC GTTGAGTACC TTGGATTTAT TGTCACCAAT GGAGGTGCAA AAACCGACCC      3480
     AGAAAAGGTA AAGGCCATAA AGGAATACCC AGAGCCTACA AATTTGTATG AGCTAAGGTC      3540
     ATTTTTGGGT CTGGCCAGTT ATTACCGCTG CTTCGTTAAG GACTTTGCGG CGATCGCTAG      3600
     ACCGTTGACG AGCTTGATGA AAGGAGAAAA CGGCTCCATC AGCAAGCACA TGTCCAGGAA      3660
     GACTCCCATC GAGTTCGGTG ATTTGCAGAG AGATGCATTC GAGAGGCTGA GAAATGTCTT      3720
     GGCTTCTGAA GATGTAATTC TCAGATACCC TGATTTCAGG AAGCCATTCG ATCTAACGAC      3780
     GGACGCTTCC GCAAACGGTA TCGGTGCAGT CCTATCGCAA GATAAAAGAC CCATCACTAT      3840
     GATCTCTAGG ACCCTCAAAG AAAGCGAGTC ACACTACGCC ACGAATGAAA GAGAATTGTT      3900
     GGCCATAGTG TGGGCCTTAG GCAAGTTGCA ACACTACCTG TATGGCACTC GCGATATTAA      3960
     CATTTATACG GACCACCAAC CGTTGACATT CGCGGTATCC GATCGGAATC CAAATCCGAA      4020
     AATAAAAAGA TGGAAAGCGT ATATCGATGA TCATAACGCA AAAATCCACT ACAAACCGGG      4080
     AAAAGACAAC CATGTGGCAG ACGCTCTTTC CAGGCAGAAC ATTAATGCCT TACAAAGTGA      4140
     GCCTCCGTCA GACGCTGCGA CTATTCACAG CGAGCTGTCA CTGACCTACA CGGTCGAAGC      4200
     AACAGACCAG CCAGTGAACT GCTTCAGAAA CCAAATTGTT CTAGAAGAAG CACGTTTCCG      4260
     ACTAAAGCGA AGCTTGGTGT TGTTTCGTAG TAAAACTCGC CACTTAATCA ATTTCGCCGA      4320
     CAAAAGCACC ATTTTGGAAA TGCTAAAGGA GGTCGTGAAC CCCGATGTCG TGAATGCGAT      4380
     ACACTGCGAT CTACCCACCC TGGCAAGTTT TCAACACGAC CTAATTGTTC ATTTCCCGGC      4440
     TACGCAATTT CGATACTGTA AAAATATTGT AATAGACGTT ACCAATCGAA ATGAGCAGTT      4500
     GGAAATTGTC ACGACAGAGC ACAATCGTGC ACACAGGGCA GCGCAGGAGA ATACCAAGCA      4560
     AATCCTCCGC GATTACTATT TCCCCAAAAT GAGCAGCCTG GCAAAGGAAG TAGTTGCAAA      4620
     TTGTAAGATA TGCACCAAAG CCAAATATGA CAGGCACCCT AAGAAACAGG AGCTCGGGGA      4680
     AACACCTATT CCTAGCTATA CCGGCGAAAT GCTGCACATT GATATCTTTT CGACCAATAA      4740
     GAAACAATTC TTAACGTGCA TTGACAAGTT CTCAAAGTTT GCAATAGTGC AACCAGTGCT      4800
     GTCCAGAACA ATAGTGGACG TCACAGGGCC CCTACTTCAA CTCGTAAATT TGTTCCCCAA      4860
     AATCAAGACA ATATATTGCG ACAACGAAGC CGCCTTCAAT TCAGAGACTA TTACCTCGTT      4920
     ACTTAAGAAC AGCTACCACA TTGACATTGT CAACGCGGCC CCGCTGCATA GCTCGTCAAA      4980
     CGGCCAGGTG GAACGATTCC ACAGCACCTT GTCAGAGATC GCCAGGTGTC TTAAACTAGA      5040
     CAAAAAGATT AGCGATACGA CAGAATTAAT TTTGAGGGCA ACGATAGAAT ATAATAAGAC      5100
     CCTACATTCT GTCACTCAGG AGAAACCGGT CGAGATCCTC CACTCGGGTC CCGATGATCG      5160
     CTGCCTAGGC ATCAAAGACA AGCTGGTAAA GGCCCAGAAA AATAACATCG AAAGATGCAA      5220
     CCCAGCTAGG CAGAACCGTG TTTTTGAGGT AGGAGACGAG GTTTTCGTTA AAAACAACAG      5280
     AAGGTTAGGA AACAAGCTAA CCCCGTTATG CACAGAACAA AAAGTGCAAG CAGACCTGGG      5340
     AACGTCTGTT CTTATTAAGG GGAGGGTGGT CCACAAGGAC AACCTCAAAT AAAAAATTCC      5400
     CACTTTTATT TTCCTATTCC TAATTGTAAG CCAGATTTAA GTAAATATGC CGTGGTCTCA      5460
     ATCTACGTTT GGTTTGCAGG TTCGCCCTCG TAACACTCAT CATCCTGGCA GTGGCAAATG      5520
     CACGGATTAC CGACTTTTCC CACGCCAAGT ACATTCCCGT CGTAGATGGA GATGTACTGG      5580
     TGTTCGAACA TCGTAACTGC CTGAGGCATT CGAGCAACCT GTCTGATTAT ATTTACATGG      5640
     TAGATGAAAC AAAGAAATTG TCCGCTTCTT TTCCACAGTC GCATATGCGC AAGTTGTTAG      5700
     ACGTTGATAC AGATCACCTG GTAAACTTGT TGTCCGTTTT AAAAATACAC CACCGTATCG      5760
     CTAGAAGCTT AGACTTCCTG GGTACAGCTC TTAAGGTAGT TGCGGGAACT CCCGACGCCT      5820
     CAGATTTTCT AAAGATCAAA ATGACCGAAG CTCAGCTGGT AGATTCCAAC TCCAGGCAAA      5880
     TAAATATAAA TTCCGAAACC CAAATACAAA TAAACAAACT TACCGACACC GTTAACAGAA      5940
     TTATTAAAGC CCGAAACAAC GACTTGGTCG ACACCCCGCA TCTGTACGAG GCATTGCTAG      6000
     CGAGGAATAG AATGCTGGCA ACAGAAATCC AAAATTTAAT TCTAACAATA ACATTGGCTA      6060
     AAGCTAACAT AGTAAATCCC ACAATCCTTA ATCATGCCGA TTTGAGCTCA TTAATTTAAC      6120
     AAAACACTCC AATAGTTAGC TTATTAGAAG CCTCTAAAAT TAGGGTTCTT CAGTCCGACA      6180
     GCATTATTCA CATACTAATA GCCTATCCCA GGGTGAAGGT AAAATGTAAG AAGGTCCTCG      6240
     TATACCCAGT ATCACACTAT CAGACAATCC TGCGACTCGA TGAAGACACC TTAGCGGAGT      6300
     GTGAGGAAGA CACCTTTTCG GTCACCGAGT GCGTGGAGAC CACGCACGAC ACTTTCTGCG      6360
     AGCGGTCGCG ACGCGATACC TGCGCCCGCT CACTCCATGC GGGAAATACT GCCCAATGCC      6420
     ACACGCAATC CAACCACCTT AGGGCAGTAA TGCCTATAGA TGACGGCATA GTTATCATCA      6480
     ACGAGGCAAC AGCCCGCGTC AGCACGGATG GAGGCCCAGA GGTGCTCGTC AAGGGGACGC      6540
     ATCTAATTAC ATTCGAACAA TCAGCTACTA TCAACGGTAC GGAGTTCGTA AACCTCCGTA      6600
     AGGCAATAAA CAAGCAGCCT GGCGTAGCAA GATCGCCGCT ACTGAACATC GTCGGCCACG      6660
     ACCCGGAACT TAGCATGCCC TTGCTTCACC GCATGAACAA CGACAACCTG CGCTTTATCC      6720
     AAGGATTCAA AGACGAGGTT GACGCCGCGG GTTCCCCCAA ACTTTGGTTC GTGGCTGGAG      6780
     TAGTCCTCAA CGTTGGACTG ATTGGTTCGC TTATCCTTTT TCTGGCATTA AGGAAACGGC      6840
     GAGCCTCCGC TGAGATTCAA CAGACCATCG ATAAACTCAA CATAACCGAG GACGGTCATA      6900
     ATCTTAGGGG GGGAGTAGTT AACAACTAAG AGCACACACT ATTAAGAGCA CACATATAAC      6960
     AAATTAATTA ATATAAACAA TGCTGACGCG CCCAAACTGA GTTCAGCGCT CTGCGCCACG      7020
     AACGGTCAGC AACAGCAATC GGACACCCCT TATCCGGGGT ACCGAGCTAT GTTGCATAAA      7080
     TGCTGAGTCG GCTTGCCGAC CATGGCTTTA TGGCGTGATG CATTGGAGCC ACAGTAGATT      7140
     TACATTTTCA TATTCTTTTG TATTCAGTCT TAAGCCAGAG CTTTAATAAA GAGCAGCTAT      7200
     TCACTCCGGC TCGCAGCCGT AAAATATCAT TTTATTATTT GAACATTCTC GCTGAGCCAA      7260
     AAGGCCAGCG ATCGACAAAG AGGGCAAAGT CACGCCCTCC GACATAAACT TCATAAGAAG      7320
     ATATTATCCT ATTGTCCCTG GTAGCAGCCA GCACCAGATC TCCACCGCCT GGAGACCACC      7380
     GGACACATCC CGAAGGAGGA ACACATTAAT T                                     7411
//
ID   GYPSY2    standard; DNA; INV; 6841 BP.
XX
AC   AL035631;
XX
DR   FLYBASE; FBgn0063435; gypsy2.
XX
FT   source          AL035631:complement(24724..17886)
FT   SO_feature      five_prime_LTR ; SO:0000425:1..351
FT   SO_feature      three_prime_LTR ; SO:0000426:6489..6840
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
XX
SQ   Sequence 6841 BP; 2002 A; 1658 C; 1549 G; 1632 T; 0 other;
     AGTTAACCAA AGCTAACGTC GCTCCCACGG GCGTATGAAA TACGACAACA TCGGCATACT        60
     GCAACGTAAG CATTATGCCG GATGTCGATA CGTAGCCGGC AGACACTGCA GATTTGCGTG       120
     GCCGCTACGA ATATGAGATC GCAACAATGT GTTTCGTTTT CATGCTAGCT CCAAAGTTTG       180
     AATTCTTGTA TTTTGTATTC AGTTCTGATT TTGTCTCCGA CGCTACAGCT CCGCTTAGCT       240
     CGGTATAATA AAACATTAAA AGTAACTCCT AATCTTTTAT TGTCACGGCT CCGCCTGACA       300
     CTTGGTTAGT AAAAGCCGCG CGCGTTAACC GCCGGCCAAC CCTTTTTCTA ATTGGCGCCC       360
     AACCAGTGGT ATTTGACAGT GCGTTAGTCA TTACCCACGA ACAAAAAAAA AAAAAAGAAG       420
     TGCAAAACAA ACTTAAAAAA AAAAAATCTA ACTAAAAGTG CAAAACAAAC TAAAAACCTA       480
     ACTACAAGTT AATCAGACTC AGCCGCATTA ACAGGGCTGT AGCAACAAAA CAAGTGCTTG       540
     TGACCACTGT TGTTTGTAAC AGAACTATTT AACAAGTGGC TGCTGCTGAC CTACGTCAAC       600
     ACAGGCAGCA CAGCTCCGTC ATTAACCTCG CCTCTTGAGT GCAGTTGGCT GAGGTGCGCT       660
     AAAGCGCAAA CTTAATTTCA CGTCACACCG AAGCCGCGGG TGCTCTTCGG GCAGCGACTT       720
     ATCGCCAGAT TAGCGCGCAA GCTATCTGGA CAGCGGAGAC GGCAGCGCGG GAGGCAGAGA       780
     CAAGCAGTGT ACAAAAAAAC AAGAAACCAA CTCCAGTGTA GAACACAGCA CAACACCAAA       840
     AAAAATGTAA GTGGGCACCT TTTTCTAAAA CTGCTCTTAA ACCTGCGAAA TAAAATTAAA       900
     CATATAAACA CATTTTTGCA AGTGTCTTCT TAAATGAAAT TAAATAATAA ATAGTTTTAA       960
     CATACATGAA ACTAGTAATG GATTAGGTTG ACGGAAAACT ATTGGCAGCA AAAATATATA      1020
     AACATTTGTT GAATAATTAC TAAAAGCGGC GCATCAAATG CATGCACGCA CAATTTGTTT      1080
     TTTCCGTCTG CCTTCATCTT GTTCGTTTTG TTTGGTCGTT CAACGTAATA CGATCCATGG      1140
     AATTTTGCAA CTTTGTTGCC TCCGTCCTCA AGCGTTGTGT TCGAGTTTTC GTTGCTTACA      1200
     TTAGAGGCAT ATGACTTCAC CCTTCCTTTT CTATAGAAAC ACTCGCCGAA AGTGTAGTGA      1260
     TTCTGACTCT GATTGCGACG ACCATCCCAT TCGCTGTTCA GTGCCAAGAC GCACACCCTC      1320
     ACCCCCACCC TCACCACGTC CTGCAGACAG CGTCATGGAC CCAGACCAGT TGAAATTCGT      1380
     AATACAGGCA GCCGTCACCG CTGCCTTAGC TGAGCAAGCC GCCGCAAATA AGGTCTTGCT      1440
     TGACAAAGTC AACTCAATGT CCCAGCAGCT GGCCGCAGCG CATATTACGC CACCAGAGGT      1500
     GCAAGCCTAT GCACCCATAG AGATAAGAAA TGACATCCGC TGCGACGAGC CACTAGATGC      1560
     CGTCAAATGC TTGCCCGAGT TTGCAGGCGC ACATGAATCG TATGTTTCAT GGAGACAGGC      1620
     GGCTCTCGCA GCCTATCGTA TTTTTAGACC GTACGACGGC AGTTCACGCC ATTATCAGGC      1680
     GGTCATAATT ATAAGAAACA AAATCAGGGG GGCCGCGGAC GTTGTTCTAG CCTCTTTCGG      1740
     CACAGTTCTT AACTTTGACG CGATTATAAG TCGCCTCGAC TTCACGTACA GCGACAAACG      1800
     TCCAGTTCAG GTAATCGAGC AAGAGCTGGC CACGCTGAGA CAAGGCAAAA TGTCCCTGCT      1860
     ACAATACTAT GATGAAGTCG GCAAAAAGCT TACATTGTTG ACTAATAAAG TCAACATGTC      1920
     ATACGAGCCG GTCCTAGCAA AGGGCCTCTG CGAAAAGTTC CGCGAAGATG CACTACGTGT      1980
     GTTTGTTTCG GGACTCAAGC GTAGTCTCAC AGATGTGCTG TTCTCAGCAA AGCCAAGGGA      2040
     CTTGCCGTCA GCTCTGGCGC TCGCGCATTT TTCATTTTAC CAGACTTGTC AACCTTCGAT      2100
     GGGATAATCG GTCTCGATTT GTTAGCTCAG GCTGGGGCGT CACTCTGTTT GGCCTCCGGT      2160
     CAGCTCAAAT GGGGTACGGA AGTTGAGAAA ATCTCCTTCC ACAAATGCAC TGATGTCAAT      2220
     TTCACCGATG TGGATTGCTC AGATGCACCC GCTTCAGTGC GGGAGACTTT TCGGAAATTA      2280
     TTAAAGGCCA GAAAAAAGGC CTTTGCAGAC CCAAACGAGG CTCTACCGTA CAATACTTCG      2340
     GTGGTTGCCA CCATCAGAAC GGTGAGCGAA GAGCCCATCT ATGCCAAGCT GTACCCATAT      2400
     CCCATGGGCG TAGCTGACTT CGTTAATAAG GAAATCCAGG ATCTTCTAAG AAACGATATA      2460
     ATTCAGAAAT CGGCATCCCC CTACAACCCC ATATGGGTGG TAGATAAAAA GGGCACCGAT      2520
     GATACGGGAA ACCGCAAAAA GCGCTTGATG ATAGACTTTC GCAAGCTTAA CGAGCACACC      2580
     ATTCCCGATA AATACCCCAT GCCAAATATA TCAATGATAT TAGGCAATTT GGGCAAAGAA      2640
     CGCTATTTTT CGACACTGGA TCTTAAATCA GGATACCATC AAGTCGTACT AGCGGAGCGC      2700
     GATCGGGAAA AAACTTCTTT CTCGGTAAAC GGAGGAAAGT ATGAGTTTAA GAGATTGCCA      2760
     TTCGGCCTCA GGAACGCCGC CGGCATCTTC CAAAGAACGA TCGATGACAT CCTACTGGAA      2820
     CAAATAGGCA AATTTTGCTA TGTTTATGTT GACGATGTGA TTATCTTCTC GCAAGACGAG      2880
     GAGGCTCACA TCAAACATGT AGATTGGGTG TTAAAGAGCT TACAAGAAGC TAACATGAGA      2940
     GTATCGATCG AGAAATCGTG TTTTTTTTAA GAAAAGCGTG AGCTTTCTCG GGTTCATTGT      3000
     CACCAGTAAC GGTGCAACAA CGGACCGGTT ACCGGAAAAA GGTAAAGGCC ATAAAAAAAT      3060
     TTCCAGAGCC TAAGACGGTA TTCGAAGTCA GATCGTTTCT GGGCCTCCCA AGCTACTATA      3120
     GGTGTTTCAT CAGAGACTTC GCTGCTATAG CAAGGCCCAT TTCAAACATA TTAAAGGGCG      3180
     AAAATGGAAT AGTTAGTAGG CATAGATCGA GGAACATTCA GGTGCATTTC TCTGAGTCCC      3240
     AGCGAGAGGC GTTCCAAAAG CTGCGCAATA TATTGGCATC AGAAGATGTC ATGCTCAGCT      3300
     ACCCGGACTA TAAGAAGCCA TTTGATCTAA CGACAGATGC TTCAGCCTAT GGTATAGGTG      3360
     CGGTGTTGTC TCAAGAGGGC CGCCCTATAA CAATGATTTC AAGAACTCTT AAAGGCAGTG      3420
     AAGCCAACTA CGCGACCAAC GAGCGTGAGT TATTGGCCAT CGTTTGGGCC CTGGTTAAAC      3480
     TGCGGCATTA CTTGTATGGA GTGAAAGATA TAAATATCTT CACTGACCAT CAGCCGTTAA      3540
     CATTTTCTGT GTCGGAATCA AACCCGAACG CTAAAATTAA GAGGTGGAAG GCCCGCATAG      3600
     ACGAGTTCAA TGCTCGTCTA TTTTACAAGC CCGGTAAAGA GAACCTGGTA GCGGACGCCT      3660
     TGTCCAGACA ACAGCTTAAT GTGCTGGAAC AAGAAGAGCC CGAATCTTGT GCAGCAACGA      3720
     TTCACAGTGA GGTGTCTCTC ACCCACACAA TCGAGTCAAC GGACAAGCCA TTGAACTGCT      3780
     TCCAGAACCA GATAATACTG GAAGAAGCAC GTTTCCCGTC TAAAAATACC TTGATTTTAT      3840
     TCGGGAATAA AAGGCGCCAC ACGGTTAACT TCGTCTGCAG GGGATCTTTA TTAGACGAAC      3900
     TGGCAGACAT AATCGTCCCA AGGGCCGTAA ACGCCTTCCA TTGCGATTTG CACACGCTCG      3960
     CAATGATACA AGATGAGATA GTCCGGAGGT TCCCAGCCAC AAAGTTCAGG CATTGCAGGA      4020
     ACCGTGTCGT GGACGTACTC AGAATCGAAG AAAGAAGGGA AATCTTAACT GCTGAACATA      4080
     ATAGGGCGCA CAGAGCAGCA CATGAAAATG TAAAGCAGGT ATTGTCGGAA TACTATTTCC      4140
     CCAAAATGGC CAAGCTGGCC AACGAGATCG TGCAGAATTG CAGGACTTGT GCAAGGGCAA      4200
     AGTATGACAG GCACCCGAAA AAACAAGAAC TCGGTGAAAC GCCAATACCG TCACATACAG      4260
     GGGAAATGTT GCACATCGAC ATTTTCTCTA CCGACAAAAA GTTTTTCCTC ACTTGCGTCG      4320
     ACAAGTTTTC TAAATTTGCC GTCGTACAAC CAATCGCTTC GAGAACTATT GAAGACCTGA      4380
     AGCCAGCGCT GCTTCAGCTC ATGAACTTTT TCCCAAGGGC AAAGACCATT TATTGCGACA      4440
     ACGAACCGTT AAGCGTTACA AACGCACCAC CACTGCACAG CACCTCCAAC GGGCAGGTGG      4500
     AGCGTTTCCA TAGCACGTTT CTGGAGCTAG CCAGATGCAC AAAGATAGAC AAGGGCTTGA      4560
     GTGATACGGT CGAAATAATA ATGTTGGCCA CTACCCAGTA TAATAAGTCA ATTCACTCGG      4620
     TCATCGACAG GAGACCGGCT GACATCGTCC TAACACACCC CGAGGAGCCA CAGCTAGAGA      4680
     TCCACAATAG GATCCAGAAG GCTCAGACCG CGCTGAGGGC CAGAGAAAAC GCCTCGCGAC      4740
     AGAATAGGAC ATTCGATGTT GGCGAGAAAG TGTTGGTAAA ATCCAACCGA AGACTCGGCA      4800
     ACAAGCTCAC GCCGTTGTGC GAAGAAAAAG CTGTAGAAGC GGACATGGGG ACCACGGTCC      4860
     TTATTGAGGG GAGGGTGGTC CACAAGGACA ATTTAAAATG ACGCGCTCAG CAGCGAGGTC      4920
     AGTGTTTCGC TTAATTTTAA ATTTTTTCTA GCCACTTGGC GTAATTTTTA ATAGATCTAA      4980
     GCGTAGCGCC ATCCGCGCAC ATTATATTCT TAAGCATTTT TATTATTATT GGTGTTGGGT      5040
     TCCCCTTGTC GACAAAATAA AAAAATCAAC CATTTAAACT TTCACCCACA GGACCAATCT      5100
     TATCCTTCTC GTGTCTCTAT CATTGGCATC GGCTCACATC ACCGATTATT CGCGCGCCAA      5160
     ATACATTCCC ATAGTCGATG GCCAGATCTT GGTGTGGGAG AATTTCGCCT ACGTGAGGCA      5220
     CTCCGCGAAT CTTTCGGAGT ACGCACGGGT AGTAGAGGAG ACGGTCGGTC TGCTTAGCCA      5280
     CTTCCCGCAG TCACACATGA GAAATTTGCT GAATGTAGAT TCAGCACACC TCCGGGACTT      5340
     GCTGGATGCG CTGGGCGCGC ACCATCGAGA AGCTTGGACT TCCTGGGCTC CATACTAAAG      5400
     GTTGTAGCCG GTACACCTGA TGCCAGCGAT TTGCAAAACA GTAGGGTCAT AGAGGCGCAA      5460
     TTGATAGACG CGAACAATAG GCAGATAGAA ATCAATACAA AAATCCAGAG TCAAATTAAT      5520
     AAATTAACTG CCACCGTCAA CTTAATCCTC AAAACAGCAA AAGCGTCGCA AATTGACTCC      5580
     GGTCATTTGT ATGAAACGTT GCTCGCGAGA AATAGAATGC TCATGATGGA GCTTCAAAAT      5640
     TTAATGTTGG CCGTGACACT TGCAAAAATG AACATTGTAA GCCCAAATAT TCTTGATCAC      5700
     GCAGATTTGA GTTCAGTTTG GCTAGAGGAG CCCACCAACA CCCCCATAGG GGACCTCATG      5760
     TCCGTATCGT CCGTAAAGGT TCTGCAGTCC AATAACGCAT AACACTTTAT CATCAAATTT      5820
     CCGATAATTA AGTTCGCCTG TAAAAAATTA CTATTTTCCC CGTCAGTCAC GAAGGAGCCA      5880
     TGCTACGTTT AGATGATGGC ATTATCGCAG AATGCGACAA CGAGATCCAC ACCGTCAAAG      5940
     CTTGCACCGC ATCAACTAGC GCCACCTTCT GCCAGCTATC ATCAGGCAGC TCTTGTGCGA      6000
     AAGAACTCCA TGCAGGCGGC GAGGCACACT GCGAAATACA ACCCAGCAGC CTGGACCCCA      6060
     TCAGCTATGT AGATGAGGGG ATCGCATCAT CAACGACAGG GCCGCCAAGG TACAAGTGGA      6120
     CAACGGCTCT GAAAACTGGG TGCATAGTAC GCATCTTGTT ACCTTCGCCC GACGTGCCGT      6180
     CATTAACGGA ACCCTGTACG TCAACCAGAA CGGTATCCAG AACAGAGTAC CAGGGGTACC      6240
     AAAATTCCCT CTGCTGAACA TCACCTCCCA CCAAAGCGTG CTCAGTCTCC CGTACCTTCG      6300
     TCGTCTAAAT GAAATGACCC GAAAGACCCC AGCGAGTGGC ACTGACCGTA GCAGCATCAT      6360
     GTTGCCTCCT GTTATGTGTT GCCATTGTGG GCTGGCGCGC ATGGAAGGCC AAGAGGTCCG      6420
     CAAGACAACT GAACGTGGCG ATTGCGGAGT TAAGGTCGGC CTCCGTCTTG AGGGGGGGGG      6480
     GGGGAGGTAG TTAACCAAAG CTAACGTCGC TCCCACGGGC GTATGAAATA CGACAACATC      6540
     GGCATACTGC AACGTAAGCA TTATGCCGGA TGTCGATACG TAGCCGGCAG ACACTGCAGA      6600
     TTTGCGTGGC CGCTACGAAT ATGAGATCGC AACAATGTGT TTCGTTTTCA TGCTAGCTCC      6660
     AAAGTTTGAA TTCTTGTATT TTGTATTCAG TTCTGATTTT GTCTCCGACG CTACAGCTCC      6720
     GCTTAGCTCG GTATAATAAA ACATTAAAAG TAACTCCTAA TCTTTTATTG TCACGGCTCC      6780
     GCCTGACACT TGGTTAGTAA AAGCCGCGCG CGTTAACCGC CGGCCAACCC TTTTTCTAAT      6840
     T                                                                      6841
//
ID   ACCORD    standard; DNA; INV; 7404 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063447; accord.
XX
FT   source          nnnnnnnn:1..7404
FT   SO_feature      five_prime_LTR ; SO:0000425:1..557
FT   SO_feature      three_prime_LTR ; SO:0000426:6482..6910
FT   SO_feature      CDS ; SO:0000316:1552..2604
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 7404 BP; 2750 A; 1738 C; 1139 G; 1777 T; 0 other;
     AGTTACCATG CCCAGCATTA ACCCCCCTCA ACAACCACCT CCGCCTATGA AGCCCGCCCG        60
     GTAGGCGACA TCAGCAAAGT GCCAACGCTG TATATATATA TATTGATCAC GAGCTACCAT       120
     GCCAGCATAG CCTCGTCCCC CGCTACCTGA AACTCTGTTG CACCCGATGA TGAAATCGGC       180
     ATGAACACAC ACACACACAC ATATTCACAC ATACTGCGTG GTGGCGACGC TCTCGACGTT       240
     GAAATTAACA TGAACCTACA CACACACATA CACACTGCGT AATCGCGACG TCCTCGTCTA       300
     GACTCGCTAT CTAGAACTAA CGGGATCAAA AGCACTGCTG CTTGCCCGTG CGTATACATT       360
     AAGAATAAAG CTTTCATCAT TCTTGATCTT GACACCAAAC CGAGCAGTTG ATTTATTTAA       420
     AGTGGCAAAT ATATATAACC TACATATATC ATAAGTACAC AATAAAGTCA TTATTGACTC       480
     CCATCACATC AGCCTGGGCA GCAACTAACT AAGAGTAGAG AAAGGAGGAC CCCCGATCCA       540
     ACGGAGGCAC CCGTAACTGG CGCAGCCGGA CTAGAACTAA AAGGATTAAC AACGCCTTTC       600
     ACGTTCTTCG TTCCACTTCT GTAAACGGGC AAGTGAGTGA ACAAGTGGCA GAAAAAAAAA       660
     AACACAAGTT TGAGGAGCCA AGTGTAAATA TGTGGTTCTC AAAAAAAAGA GAAGAAAAGG       720
     AAAAAACTTC ACACAAACAA GTTCAACAGT GACATACAGT ATAATTACAA ACTATTGTGA       780
     CCGAATATGT GCACATCAAT CGCTGAAAGG GCACCGGGAT CACACATAAA AAAAATGTCT       840
     TTACATTCAA AGTGACCGAA TATGTGCACA TCAATCGCTG AAAGGGCACC GGGATCACTT       900
     ATGACATACA TAAAAAGTTA ACATCATTCA GTGCTATGGC CAAATATGTG TACATCAATC       960
     GCTGATGAGA CACCGGGACC ATACATAAAT AAGCAAAACA AATAAATCTA GTTCAATGTT      1020
     GTGGCCGAAT ATGTGTACAT CAATCGCTGA AAAGGCACCG GGACCACAAC ATTGAAAGAA      1080
     ATTAAACAAT AAATCAGTAA TAAAATCACT ATGTGTGTCA GGTTGAACCT TTCCTTGAAA      1140
     GCCATATACT TGTTCGCGAA TGCTCCCAAT TGAGAAACAT TTGTCAAATT ACAAATACAC      1200
     TCAACTTACT ACTTCGGATT GTGTTACTGC CATGTGTTCA TTTACTTATA CAAACTGAAT      1260
     ATAAATTTTT TATACTTACT AATGTACATA ATATATTACA GTCAAACATT GGAGCCAACA      1320
     CTTACTTAGA AAGAAACAAA CGGATTCATA TTATAAATAC ACACTACATT TTAAGATTAT      1380
     CTATATATAA GATTACAATT ACTTAATTAC ACCTTATTAT TTAAGCTAAA ACATTACACT      1440
     AAACATATAC ACAACATATA GGTACACGTA TACAAAAGTA TATAAGCACA ATAACACATA      1500
     TACCATATTT TTAAGTACAA CACACAGACT ACACAAATCA AAAACACCTA CATGCCAAAG      1560
     AGAATTCCGT TTAATACCCA AAGTAAAAGA AGACTTGGAC TTAGAAGTGG AGGCAGCCTT      1620
     CCTCAAATTA GGGAACAAGT AGAACAATCC ACCAACAGCA ACAACATGGA CTCGGGAAAC      1680
     GCATCAGCCC CTTTAAGTCC GACTACTTCC GCTACTTCCA CAGTTATTAA CACCAACCTT      1740
     AACCCAACCG ACATTTTGGC TTTTATCGAA CAACTCCCCA CTTTTGAAGG TCATCCTAGC      1800
     AATCTCGACA AGTTCATAAC TAGCGCTGAG GAACTGCTGT TCCTCATTAG ATCAGTAGAC      1860
     AAGACCCCTT ATGGACAACT ACTTCTAAGG GCCGTCCGCA ACAAAATCGT AGGAAAAGCA      1920
     GACGATGCCT TGACCCTTTG CGACACTCGA TTGAACTGGG ACGACATCAA GACTAATCTC      1980
     AAACGACTCT ACACCAGCAA GAGAACCGAA GCGATGATAC TTAGGGAAAT ACAGACCCTC      2040
     CCAAATGACC TTACAATGGG AAAACCTTTT TACAGTATAA TTAAAATGAG AAACGAACTT      2100
     ATAACAATAG CTAAAGACAT GGATACCACG GGTAATGCAC TCGCAACTAA ACGTACCCTC      2160
     TACGATGATA TATGTCTCAA CGCATTTATC ATCGGATTAA AGGATCCACT AAGAACAATC      2220
     ATAAGAATTA GGAACCCGGA CACTATCGAA AAAGCTTACG AATACGGACA AATGGAACAA      2280
     AGTTTTTTCT TCCAAAACTC AAACAGACAA GTAGAGGGCC GTCGCCGTGA CAATCCAACG      2340
     GACAGAGGAC GCCCATACCC AAAAAATAAC CAACAAGAAC CGAAACTATC AAATAATAAT      2400
     GGTCGCAACA TTTCGCACCA ACAAACCAGT CATCAGCAAG GGGGACAATC GATGAGAAAT      2460
     CAAAACACAT CCCACAACTA CGAAAAACCA ACTTCAACAC ACCAACAATA CAGAATCAAT      2520
     ACTAACACAA ATGTAAATTT GTGCAACATA AATGACGACA CAAATTTTCC GCAAAGAGCC      2580
     TCGGAAGACC AGTCGGATTC ATAACTAAAA AAGCCCACGG GTCATCATTA CCTTATGTAA      2640
     TGCTATCCCC AACATTTGTC CCTTCACAAC CACTTAAATT CCTAATAGAC ACTGGGTCCA      2700
     CTTATTCATT TATAAACCCG GCCCTCATTA CAGAAGACAA TATAAAAAAA CTTAATTCAA      2760
     GCATAGCCAT TCATACAGTA CTTAATACAT TCCAAATTAC GGAATTCACA GACACTATTA      2820
     AATTTAAACA ATTCAAAGAA TTGTCAAATC AGAAGTTTCT TTTGTTCAAT TTTCATCCAC      2880
     ACTTCAATGG CCTCTTAGGC ATGGATCTTC TATCCACTCT GAATGCAAAA ATAAACATCG      2940
     CGGATTCCAT TTTGGAAACA CCTGAAACCG CAGTTCCAAT TTTGACACGA CCAAACCCTG      3000
     TAGACATTTT GCATACTGTA CCATCAAATA GCAAGGTAAG GCTTCCACTA CCAGTAAACT      3060
     GCATGCAAGG AGACTTTATA TACGGGACCA CAGATTTTGA CAACCAACTA TCAATAACAG      3120
     GTGGACTGTA TACTGCAACC GCAGGTATAG CCTATTTCGA AGTCTGTAAC AGTTCAGACT      3180
     ACAACCAAAC ACTTTATTTA GAAGAACCAT TAATAGCAGA AGAACTCTCT TTACAACACT      3240
     ATGGACTTTT ACACTGCATG TCTACAATGG CGGATACTAC TCAGACGGAC ACCCAACAAG      3300
     AACTTAATAT TAAGACAGAA CATTTAAACC AAGAAGAAAA ATTTAATCTA ATCAATCTAT      3360
     GCAAAACCTT TAGGAAACTT TTCCATTATG AAGAGAGCCA TTTGACCTTT TCTAATGTCG      3420
     TTAAACACTC CATACCAACA GTAGACAATG TTCCGATATT CACTAAATCA TACCGTTACC      3480
     CATATGTACA CAAAGAAGAA GTTCGTAAAC AAATATCAGA AATGCTTCGA CAAAATATTA      3540
     TTAAAAACAG TCACTCTCCT TGGAGTGCAC CCGTAGGGAT CGTACCCAAA AAAGCCGACA      3600
     CTACAGGCAA AGAAAAATGG CGGTTGGTAA TAGATTTTCG AAAATTAAAC GAAAAAACCA      3660
     TCTCCGACCG TTATCCGATA CCTAACATAG CAGACATACT GGACCGAATA GGTGGAACAA      3720
     AATACTTCAC AACAATAGAC TTGGCAAGTG GATTCCATCA AATTGAGATG AATCCACAAG      3780
     ACGCGAACAA AATAGCTTTC ACAGTCGAAA ATGGGCATTA CGAATTCACA AGAATGCCCT      3840
     TCGGTCTGAA GAACGCACCA GCCACTTTTC AACGTGTGAT GGACAACGTT CTAGGAGACC      3900
     TTATAGGTAA TGTTTGTCTG GTTTACCTAG ACGACATTAT TATATTCTCA CCCTCACTGC      3960
     AGAAACACAT TAGCGACATT AAACTTGTTT TCTCTAAGCT ACTGAATGCG AATCTAAAAA      4020
     TCCAACCTGC TAAGTGTAAC TTCTTAAGGA AAGAAATTGA CTTTTTGGGA CACATTGTTA      4080
     CTCAGGAGGG AGTCAAGCCC AACCCAAACA AAATACAAGC TATTAAAGAC TTTCCCTGCC      4140
     CCAAAACCAT CAGGGAAATC AAGTCATTTT TGGGATTACT TGGGTACTAT AGGAAGTTTA      4200
     TCAAAGATTT CGCAAAAATA ACAAAACCTA TAACAAGACA ATTAAAAGGA AAAAAATCAA      4260
     TAGTAATAGA CGACGAATTT AGGAAAGCAG TCGAAATTTC AAAGAATTTA TTATGCAACG      4320
     ACCCAATACT TATATTCCCC GACTTTACAA AACCATTCAC GTTGACGACC GACGCAAGCA      4380
     ACTACGCCAT AGGGTCAGTG CTATCACAAG GCCCCGATAC CAACGACAGA CCCATATCCT      4440
     TCGCTAGTAG AACGCTATCA GACACAGAGG TTCGATATTC CACCATAGAA AAAGAAATGC      4500
     TAGCTATTAT TTGGTCAGTA AGTCATTTTA GGCCATACCT TTTTGGCCAG AAATTTAAAA      4560
     TAGTCACAGA TCACAAACCA TTAGTCTGGT TAGAAAGCTT TAATGGTCAA AACCCTAAAC      4620
     TACTTCGGTG GAAAACTACC CTAGCCGCAT ACGATTACGA AGTAGTGTAT AAAAAAGGCA      4680
     AACAAAACGT GGTCGCTGAT GCGCTTAGTC GAATAGAACC AAATTTAAAC ATAAACGAAG      4740
     ACCCACAAAA AATCCCAGTT GTCCAACAAC CATTAAATCA TTTCAATACA CAAATTGTGT      4800
     TCCACATTGG GGAAAAGTCT TCAGTACAAA TCACAACACC ATTTACGTAC AAAACAAGAC      4860
     AAGTCATTTC AGAACCTACA TATACCTTTG ACACTATTTC TAACATCTTG CAATCAATTC      4920
     TTAAACCAAA CAAAATGACT GCAATATTTG CCCCAGATCA AATCTTTTTG CTCATAGAGG      4980
     AAGCGTATAA CAACTACTTC TCGGTGAACG ACTCATATAA AATCTCCCGT TGCAAACTGT      5040
     TCTTACCCGA AATAACCGAA ACGGAAGACC AAAAAACAAG AATACTTACA TACCACTTAA      5100
     AGAACAACCA CAGAGGTATC GACGAAACCT TTCAACACCT AAAAAGAGAT ATTTATTTCC      5160
     CCCGCATGAA AGATATTATT ACGCAAGTAA TAAAAGACTG TGACATTTGC CTTACACTTA      5220
     AATACGACAG GCAACCCCAT AAACCAGCTA TGCAATCACC ACCTGCCCCA CCAGGACCTT      5280
     TAGAGGTGAT CCACATAGAT ATTTACTTCG TCAATGGTAC TTATAATCTA ACTGTCATTG      5340
     ACAAATTTTC AAAGTTCGCA CAAGCATACC CGCTTGATAA CAGAAACTCC ATAAAAATCA      5400
     TTGCCGCCTT GTCTCAGTTC ATGAGCAACT TTGGCATACC CAAAAAACTT GTTTTCGATC      5460
     AGGGAACAGA ATTTTCCGGA AACCTGTTTA ACGATTTCCT TGCTCAATAC GATATACTCC      5520
     AACATACTAC TTCATTCCAA CAATCGACTG GTAATTCACC CGTCGAAAGA CTTCACTCTA      5580
     CGTTAACAGA ATTGTACAGA ATAGTTATGA ACCGTCGAAA AGAATTACAC CTACAGTGCG      5640
     AACATACCGA AATACTTAGC GAAGTATTAA CAACCTACAA TAACGCGATA CATTCTAGCA      5700
     CAAATCACAC CCCTTTCGAA CTCTTTCACG GCAGGACACA CATATTTGGA AAAACCATAA      5760
     CTTATGACAA TCATCATGAC TACCTCTCAA AACTAAATCA ATTCAGACAA ACACTATACC      5820
     CCCAAATACA ACAACACCTA CAAAACACCA CCGATAAGAG ATTGGCTAAG TTAAATAAGG      5880
     ACAGGGAACC GCCAATTCTA GTTGAGGAAA ATAATACTAT ATATAGGAAG GAAAACAGAA      5940
     GAAACAAAAT AACACCTAGA TTTTCTCTAC ACAAGGTAGA AAGAGACAGA GGGATAACAC      6000
     TAATAACTAC CAGAGGTCAG AAATTACATA AACAAAAAAT TAGGAAACAC ATTAAAAGAA      6060
     CTGTGAACAC CCAGTCCAAA TCAAACACTA ACACTTAATG AATTCAACTA AACATGAAAA      6120
     TGTAACAATT AAAAGACAAA TTTGATAAAC AGACAGGGAC ATTATTATCA GGATCATATA      6180
     TAAAATAGAA CACGTAAATA ACAAACAAGT TTCGATATAG AAATTTTTCG AAAATTACCA      6240
     GAACCAAATT TTTAAAGAGC AATAACGTGG CCGAAAGCTT ACTTGCTAGT AAGTTAGGCC      6300
     TCATTTTCAA ATTTATGTTT AATACACAAC AATTAGAAGA CATACGAATT TTATTTAATA      6360
     AGCAAAATAT AACCATAGAA TTGGATGAAC ACATTAACAA CTTTTGTAAC CATCCTGTTA      6420
     AACTCTTACT TGCAACACCA AACTATTATT TAAGGTTAAA AATCCATTTT TCAACTAGCA      6480
     AATGTATCAT TTCATTCAAA CAATTCCCTT ACCTATACAT TGTTCATACT TCATTGTCTC      6540
     CCACGACAAA CTTACCATCG AGATACCACC AATGGAACGA ATAGAAAATA ACAAAACATT      6600
     GAAAGTCCTA TCACTCGAAA AACTGCACCT GGAGGCATTG GCAACAACCG GGAAAATGGA      6660
     CTACATAACT CAACAATACT TTACCGCTAC GTACCTTGCA TTGAGCATAG TACTAATACT      6720
     TGTGATCTGT CTCCGAACCT GTAAAAGGCA GAAAACGATT TTTACCCAGC AACCCACCCA      6780
     CACACCTCAC GTTGTCGAGT CGGCTATCCC TTCGTTATGG CCATCTCTCC GCACTAGGGG      6840
     GGGAGGAGTT ACCATGCCCA GCATTAACCC CCCTCAACAA CCACCTCCGC CTATGAAGCC      6900
     CGCCCGGTAG GCGACATCAG CAAAGTGCCA ACGCTGTATA TATATATATT GATCACGAGC      6960
     TACCATGCCA GCATAGCCTC GTCCCCCGCT ACCTGAAACT CTGTTGCACC CGATGATGAA      7020
     ATCGGCATGA ACACACACAC ACACACATAT TCACACATAC TGCGTGGTGG CGACGCTCTC      7080
     GACGTTGAAA TTAACATGAA CCTACACACA CACATACACA CTGCGTAATC GCGACGTCCT      7140
     CGTCTAGACT CGCTATCTAG AACTAACGGG ATCAAAAGCA CTGCTGCTTG CCCGTGCGTA      7200
     TACATTAAGA ATAAAGCTTT CATCATTCTT GATCTTGACA CCAAACCGAG CAGTTGATTT      7260
     ATTTAAAGTG GCAAATATAT ATAACCTACA TATATCATAA GTACACAATA AAGTCATTAT      7320
     TGACTCCCAT CACATCAGCC TGGGCAGCAA CTAACTAAGA GTAGAGAAAG GAGGACCCCC      7380
     GATCCAACGG AGGCACCCGT AACT                                             7404
//
ID   1360    standard; DNA; INV; 3409 BP.
XX
AC   AC005453;
XX
DR   FLYBASE; FBgn0005673; 1360.
XX
SY   synonym: Hoppel
SY   synonym: protop
XX
FT   source          AC005453:634..4052
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..30
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:3379..3408
FT   SO_feature      CDS ; SO:0000316:970..2718
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0066320; 1360\T"
FT                   /db_xref="SPTREMBL:Q86BW1"
FT                   /protein_id="AAN39288.1"
FT                   /translation="MNASDKECILACDEVAIKKNLTYNVSVDIIDGIEHLLDRSNKIGS
FT                   HICVFVLRGILKKWKFILNYFVAETNIKGDCLKSLIYKNIIIAETIGFKVRGVVYDQGG
FT                   NNRKCTSLLEVTNEKPYFTLNNKKYMFYDIPHLFKSVRNNFLRANFETPDGLVDFDVIR
FT                   EVYELDHGSVTRMTKLTRSHVNPTRFELMRVCLATQTLSHTVAAAIKTCNQNKQLHRNS
FT                   SEVAASTAAFVQKDNDYFDCLNSRVLTDKNPMKCALQVNNGVWNKLKEMQEYLKSVKYH
FT                   GNKIYCVDGLIQTTEAIFGLVEDLFKDHTDHFFFLTSRVNQDPLENIFACVRAKGGNCR
FT                   NPSVNEFNIIIAKLISLHIFKFSQKSNCESDDDVMLPIEFDSIIYQPFVEKKEIQQQEY
FT                   SVSFSKIVQDNERYFDQNIDNFLCNDVPIELTSSRYFVGYIAKGSSCDKCRSVILKETE
FT                   HLTAPSELFIHEKNYSIESDFGKLRAPSDLFFNIYKIHIKAFENIFKNNKKQMCIKKFI
FT                   VEQCIKCTNESSAFPLWFYENNECYAHRTDLLNKLIKVLLFKHCKWTVIADRQKKQAKL
FT                   SILSHE"
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   Translation is of the sequence from AF533772; AC005453 is mutant.
XX
SQ   Sequence 3409 BP; 1264 A; 533 C; 575 G; 1037 T; 0 other;
     CAAAGACACT AGAATAACAA GATGCGTAAC GCCATACGAT TTTTTGGCAC ACGATTTTTT        60
     TGCCGTGGCT CTAGAGGTGG CTCCAGGCTC TCTCGAATTT TTGTTAGAGA GCGAGAGAGC       120
     GAAGAGCGCT ACAGCGAACA GCTCTTTTCT ACGCATACAG TGATAGCAGA CAACTTTATG       180
     TGTGCACACG TATGCTCATG CATTGTAAAT TTGACAAAAT ATGCCCTTCA CCGTAGAAGT       240
     TCTTAGACTT TAAATCTATA TTATTTTTGA TCAATTGGCA TCATGCGAAA AATTCTTGTT       300
     TGCATTGCCT TAACGTTATT ATTATTTGAA AACAGATTAG AAATAGCCAA ATCCATGTAC       360
     ATATCATAAC AAAATAAATT TCAAAAATTA CTTTATATTA GAATATTTGT CATTAGAGTA       420
     TTCAGCTTGC GGCGTGTGAA AAATTAATAA GGCAATGATT GTTGAGTGCT TGTGTCCGCA       480
     CTTCGTGCCT CAAGATATGA CCAAAACAAA GACACTAGAA TAATTCTAGT GTCTTTGATG       540
     TGACTTTTGC AATAAACAGT TTTCATATTC ATATTTATTT TACTAAAGAC AAATTAGAGA       600
     GCCAATTTAG AATTAAAATG CTGAGGAAAG AAAACTCAAA CCTAAAAAAA AATAAGTTAG       660
     GTTGGAATCT AAGACCGAAA AAAACATATA TTCTGAAATA GATAAAATTA ATTTAACAGG       720
     AAATGAAAAA ATATTAACGA AAATGCTTTT TAAGGAAAAA AGGGCACAAA TACAAGATGG       780
     AATGATTGCG AAAAATTGTT TGCTCAGAGC ATATATTACA GGTCCACTTT GACATATACG       840
     TTCTTAAGAG ACTCGCTGAA ATTAAATTTT CCAAGTCCAT CATCTTTGCA AAAGTGGAAC       900
     AGCATAAAAA AGTTACAGCC AGGAGACAAC GAATGTTTGT ACTCAGCCCT TAAAGAATCT       960
     ATAAAAGAAA TGAATGCATC TGATAAAGAG TGCATATTGG CTTGTGATGA AGTAGCGATA      1020
     AAAAAAAACC TAACTTACAA TGTGTCAGTT GATATAATAG ATGGAATAGA GCATTTACTT      1080
     GATCGCTCTA ATAAAATGGG AAGCCATATT TGCGTATTTG TTGTTCGGGG TATTTAAAAA      1140
     AAATGGAAAT TTATATTAAA CTATTTTGTG GCCGAAACGA ATATAAAAGG CGATTGCGTA      1200
     AAAAGTCTTA TTTATAAAAA TATTATTATT GCTGAAACAA TTGGGTTCAA AGTAAGGGGT      1260
     GTTGTGTACG ATCAAGGAGG TAACAATAGA AAATGTACCT CACTACTTGA AGTCACCAAT      1320
     GAGAAATCTT ACTTTACCTT AAATAATAAA AAATATTATA TGTTTTATGA CATTCCGCAT      1380
     CTTTTCAAGT CTGTAAGGAA TAATTTTCTA AGAGCTAATT TTGAAACCCC TGACGGACTA      1440
     GTTGACTTTG ATGTCATTCG AGAGGTTTAC GAATTAGATC ATGGATCAGT AACGAGAATG      1500
     ACTAAATTAA CAAGGAGTCA CGTTAATCCA ACCAGATTTG ATCTAATGCG CGTATGTTTG      1560
     GCAACTCAAA CACTTAGCCA CACTGTTGCA GCGGCAATTA AGACTTGTAA CCAAAACAAG      1620
     CAATTACATC GAAATAGTTC CGAAGTTGCA GCTTCTACGG CTGCATTTGT CCAAAAAGTT      1680
     AATGATTACT TTGATTGCCT GAATAGCAGA GTATTAACTG ACAAAAACCC CATGAAATTC      1740
     GCGCTCCAAG TTAACAATGG AGTTTGGAAC AAACTAAAGG AAATGCAGGA ATACCTAAAG      1800
     AGCGTTAAAT ATCACGGGAA TAAAATATAT TGTGTTGATG GCTTGATCCA AACTACTGAA      1860
     GCTATATTTG GACTCCTCGA AGATCTCTTT AAGGATCACA CAGACCACTT TTTCTTTTTA      1920
     ACTAGTAGAT TAAACCAGGA TGCCCTTGAA AATATATTTG CGTGCGTTCG AGCAAAAGGT      1980
     GATAACTGCA GAAATCCTTC AGTTAACGAA TTTAATATAA TAATTGCCAA GCTCATATCT      2040
     CTACACATTT TTAAATTTTC ACAAAAGTCG AATTGCGAAT CAGATGATGA TGTTATGTTG      2100
     CCAATAGAGT TCGATTCGAT AATATATCAG CCTTTCGTTG AAAAAAAGAA ATACAGCAAC      2160
     AAGAATACTC TGTATCATTT TCCAAAATCG TGCAAGACAA TGAGAGGTAC TTTGACCAAA      2220
     ATATAGATAA CTTTGTGCAA TGATGTACCC ATTGAATTAA CTTCCAGTAG ATATTTTGTT      2280
     GGATATATTG CTAAGGAATC CAGTTGCGAT AAATGCAGAT CGGTAATTTT AAAAGAAACC      2340
     GAGCATTTAA CAGCTCCATC AGAGCTTTTT ATACATGAAA AAAACTACTC AATAGAATCG      2400
     GACTTCGGGA AATTAAAGGC ACCATCTGAT TTATTTTTTA ATATTTGCAA AATACACATT      2460
     AAAGCTTTCG AAAATATTTT TAAAAATAAT AAAAAACAAA TGTGTATAAA AAAATGTATT      2520
     ATTGAGCAAT GCATTAAGTG CACAAATGAA AGTAGTGCCT TCTCATTATG GTTTTATGAA      2580
     AATAATGAAT GTTATGCACA TAGAACAGAT CTTTTAAACA AACTTATAAA AGTTTTGCTT      2640
     TTTAAGCATT GTAAGTGGAC TGTGATAGCT GATAGACAAA AAAAGCAAGC TAAGCTCAGC      2700
     ATTCTATCTC ATAAATAAAA AAAATGAGCG TTATTTAAAT AACTGACGAC TGAAAAATCG      2760
     AGCAATATAT AATAAAAAAC AATAGTTAGA AAAATAACTT AATTGGGGAA TATGGAAATG      2820
     TTAATGTTAA ACATTAAAAT ATTTCAAGTC GACTTGAAGG TCATATACGT AAATATAAGA      2880
     CACCATTACA ATTGTAATGG CCTCCCCGTG GTGTTCCCTG GGTACCGATT ATTACACATA      2940
     TTACACATAA ATAATTATGA ACATAAATAT AAATATGTAA ACGGTAGCTA ATTCGAGCGG      3000
     CGATTTTAAC AAACGAATTT AAAAAGCTTT AAAATTAAAA AATTTTAAAA TTTAAATTAA      3060
     AATTTTAAAA TTATAATAAC AAGGGCGCGA ATTTTTTAAA ATTATTTTAT TTTATCATAT      3120
     TGCTACGAAA TTGGCAAAAA AACTACCCTA ATATGTACAA TGTAAATTCA TTTCTTAGAT      3180
     CAGAATTGAT TTCGGCCCGA AAATCGTCTT CTAGCACAAC ACGCACACTT ATACGCGTTC      3240
     TCGTCTCTTG TTTTTACTCA CACAAGCAAG CAAATTCTAT TTTTAGATTT CTTACGTTCT      3300
     CAGCGTGAGC GAGCGGAAAG ACAGCAATTT TGGCCGTCAC CAAAAAAGTG GCTGCATAGT      3360
     GCCAAACCAA TGTATGGCCG TTACGCATCT TGTTATTCTA GTGTCTTTG                  3409
//
ID   GYPSY3    standard; DNA; INV; 6973 BP.
XX
AC   AC007477;
XX
DR   FLYBASE; FBgn0063434; gypsy3.
XX
FT   source          AC007477:50788..57759
FT   SO_feature      five_prime_LTR ; SO:0000425:1..397
FT   SO_feature      three_prime_LTR ; SO:0000426:6576..6972
FT   SO_feature      CDS ; SO:0000316:1046..2326
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
XX
SQ   Sequence 6973 BP; 2016 A; 1760 C; 1499 G; 1698 T; 0 other;
     AGTTAACTAA GTTAACCGGA CTGATCGTCC GCTGACCAGC ATTTGGCCGG AAGCTCGAGC        60
     ATAGCCGGCA AAGCTCTGCA CTTTGGCAGA GGCCGCTATG AAGCTCTTCT CTTTGTAAGC       120
     TTTAAGCAGT TCGTTTTGGA CACTCATAAA ATAAAGAGCC ATCGCTCATT AACCAACAAC       180
     TCCGGCATTC TGTCGTTAAT TTTATATTTG ATCATAGAAA TCTGAGTCCC TAGGCCAATT       240
     GCATTAAGGA AGACAGTCAT CTTCCCAACG TAATCATCGT AATTCTCCAA CTGGATTTAT       300
     CACCCTCTTC CCCTGTAAGA GAGACACCAT CAGCCAACCG GCAAATCATG GGAGACTGCA       360
     GCGAGGGACC CCCTGCAGCA CCCCCACATT TAATAATTGG CGCCCCACTA AGGAAACACA       420
     CAACAACACA CACAAACACA CAGATTATGT AAGTGAGCGC CTATCTCCAA ACCCCAACTG       480
     CATTTAAACA AAGTTTATAA CATTTAAAAT ATTTCTGCGA TAAATAAATA ATCTGTATTT       540
     CCATGACAAT CCTAATCTTT GTATGTGTTG TGAATTTAAA TTATATTAAT GTATGAAATT       600
     TAAACATGGA ATTTTAAATT TTGATTGACT GTGCGGATTA AATTATTCTT TGGCACTGTC       660
     GCAGAGATTT ATTGATTTAC AATTTACATC ATGTGCATTA TTTCGTTCCA CTTCTGCATA       720
     TGTCTGCACA CTGTCGTTCC ACTTGAACTT GAATTCTCTC CCCACAGCCG TCTCGGGCCC       780
     TCCTATCGCT GCCCCGACAC CCGATACAGC AGCGCATGCT TTGCTGTAGC AATTTTTTGC       840
     CTTTTATATA TCTCTTTGTC TGTGCTGCTA CGATTTGCTT GTCATTTATA TATTTGTTTG       900
     GCTTAGCGGA TGCGAGCTCC CCGCGGCTCC GCTCAACGAG CCCTCGGCCA ATGTTATTAA       960
     ACGCCGACTC AGCCCCCGCG TCCCCTCGCC GAACTAATAC TTCCCTTGGG CAATACGACT      1020
     TGAGTATTTA TATACTCAGC TTCTCATGAG CAACTCATTC CGACAATATA GGAATTCTAA      1080
     ACCATTCGCT AGCGACTCAG AGTCAGAAGG CGACGATTCT ACAGAAAACT CTGTACATAA      1140
     GAACACCGCA GTTAACGCAT TTGTTGCATA TAAAATGTCG CTCGAAACGG AACAAATTAA      1200
     AGTCCTCATA AGGGCGTTAC AAGAGCAAGC CCTAGAAGGT CAACGCAGGG AGGCTGACCT      1260
     GCGTAATACA GTTCAGGAAC TTGCCAGCCA GCTCGCGGCT ATGCAGGTTG CCCCTGTGCG      1320
     GGCAGAAACT CCACAAATTA AGGTTTACCA ACCGGTAGAT ATCACCGGAG AAGTCCGTTG      1380
     CGAAGAAACA TTGGACGCTG TAAAACGCCT CCCAGATTTT ATGGGCACAC AGGAGACATA      1440
     CGTCTCCTGG CGGCAGGCGG CGAAGGCCGC TTACCACATG TTCAGAAACT ATGAAAATAG      1500
     TTCGCGACAC TATCAGGCTG TAGTTATCAT CAGGAGCAAA GTAAAAGGCC CTGCTGATGT      1560
     AGTTCTGTCA TCCTTCGGAA CTGTGCTAAA TTTCGATGCA ATTATAAATC GCCTCGATTT      1620
     TACGTACAGC GACAAGCGCC CGATACACGT TATCGAACAA GAGTTAGGCA CTCTCAGACA      1680
     GGGAAGCATG ACGCTCCTTC AGTATTATGA CGAGGTTGAG AAAAAACTCA CCTTGCTCAC      1740
     CAATAAGGCA ACCATGTCTT ATGAAGCCTC GGCAGCAAAG GTGCTGTGTG AAAAGTTCCG      1800
     AGATGATGCT TTGCGAGTTT TCGTCTCGGG ACTCAGGCGC AACCTCACGG ACGTGCTGTT      1860
     CGCGGCAAAA CCGAAGGACA TGCCCTCAGC ACTCGCCTTG GCACAGGAGG TGGAATTTAA      1920
     TCACGAGCGA TACACCTTCG CAACTTCGTT TGCAAGAAGC CAAGAAGATA GGGACCGCAC      1980
     GCAATATCCC AAAGTGCAGG AGCGCCAGCA GGCCCCTCCA CAAGCCAACC CGCAGGGAAG      2040
     TGCCGGAAAG AACCTAGGCA GCACAGAGCA CAAGTGCACT CTGCTCCACG TAGCGACCGG      2100
     ATGGCTCGAG AGAACACACC GGAACCTATG GAAGTTGACC CTTCATTGTC CAGGATGCAA      2160
     CCATCTCACG CCCCGGCTTA CCCGAAATCG AAGCCGGCCA CATCTGGCCG CTCGATCCCG      2220
     CCTAAAAGGC AAAGGGTCAA CCATGTTGCC CAGGCCTCAG ATTACACGGC TTATGCCACC      2280
     GCAGCCTCCA GTGCAGCGGT TAAAGTCGAC GATGATGCCA TCCTAGAGTA TGACTCGGAT      2340
     GCCATTAATT TTTTAGGGGT AAGTCCCTGC TACCCGTCAT CAGACGAAGA GTAGCGGGGA      2400
     TTGACATGAA ACTGCTAATT GCATGGCCAA AAATTTTATC TGACCTTTTA TGGGGTTGAA      2460
     AGGCGTCCGC CCGGTGGAGT CCCCATTCGC AGTCCATTCG ATTCATGGCG TGACTACAAT      2520
     CGCAAAAAAA TGTTTTATCT CTATTTTTAA CCTTAAAGCT ACATTTTCCT TACCACCAGA      2580
     TTTGACCTCC TTCGACGCGA TCATTGGCCT AGACCTATTA AAACAGGCCG GCGCGTCGCT      2640
     TTGCCGGCCA GCTCAAATGG GGCTCCGAAG CAGAGCAAAT TGACTTTCAC ACTGACTTCG      2700
     TCAACGGCGA AATTCAAGAG CTGCTGAAAA AGGGCATAAT CCAAAAGTCG AAGTCCCCCT      2760
     ACAATAACCC AATATGGGTC GTAGACAAAA AGGGCACCGA CGATGCTGGC AACAAAAAAA      2820
     TGCGTTTGGT ACTGGACTTT CGCAAACTGA ACTTGAGGAC TGTACCAGAC AGATACCCCA      2880
     TGCCAAATAT CTCAATGATA TTGGGGAATC TCGGCAAGGC CAGGTACTTC ACGACACTCG      2940
     ATCTGAAGTC TGGCTATCAT CAAATCACGC TCGCTGAACG CGACCGTGAA AAGACATCAT      3000
     TCTCAGTAAA CGGAGGGAAG TATGAGTTCC GAAGATTGTC ATTCGGACTC AGGAATGCTG      3060
     CAAGCATCTT CCAGAGGACA ATTGACGATA TTCTGCGAGA GCAGATCGGC AAGTTCTGCT      3120
     ACGTTTACGT TGATGACGTC ATCATCTTTT CAGAAGATGA AAATGCGCAT GTCAAGCACG      3180
     TAGATTTGGT TCTGAAGAGC CTGTACGATG CTAACATAAG AGTATCTGCA GAAAAGTCAC      3240
     GCTCCTTTAA GAAAAGCGTG AGCTTCCTAG GGTTCATCGT CACCAACAAT GGCGCGGCGA      3300
     CTGACCCAGA AAAGGTTAAG GCCATAAAGG AATTTCCAGA ACCCAAAAAC GTATTTGAGG      3360
     TGAGGTCATT CTTGGGCTTA GCCAGCTATT ATCGATGCTT CATCAAAGAT TTCGCATCAA      3420
     TACCAAGGCC CATTTCGGAC ATACTGAAGG GCGAGAACGG AAGTGTTAGC CGACACAGGT      3480
     CCAGGGGTAT CAAGGTAGAA TTTTCCGAAG CGCAGCAACG TGCCTTCGAG AAACTTCGCA      3540
     ACATTTTGGC GTCTGAGGAC GTCACCCTTA GATACCCTGA TTACAAAAAA GCGTTTGATC      3600
     TAACGACAGA CGCTTCGGCC TACGGCATTG GCGCAGTGCT GTCCCAAGAG GGACGCCCCA      3660
     TTACAATGAT CTCTAGGACA TTGTGTGACA GAGAGGTTAA CTACGCTACC AATGAAAGGG      3720
     AGCTATTAGC CATAGTCTGG GCGCTAGTCA AGTTGCGACA CTTTATACGG TAAAAGAAAT      3780
     AAACATCTTT ACCGACCACC AACCTTTGAC GTTTGCGGTA TCGGAATCCA ATCCGAACGC      3840
     CAAGATCAAG AGGTGGAAGG CACGCATCGA TGAGTCCGGC GCAAGAATGT TTTACAAGCC      3900
     CGGAAAAAAT AATCTCGTTG CAGATGCCCT TTCGAGGCAA CAACTCCACG TTGTTAAAAA      3960
     CCAGGAACCT GAGTCGTGCG CGTCCACGGT TCACAGTGAG CTTTCGCTCA CATACACAAT      4020
     TGAGTCTACG GACAAACCCG TAAATTGCTT CCAGAACCAA ATAAATTTAG AAGAGGCGCG      4080
     CTCCCCTTGG AAACGCACTT TTATACTATT TGGAAATAAG AAGCGTCACT TGATTAACTT      4140
     CTCGTGCAAA CAGACTTTGC TAGAGGAACT AGCCAACACC ATTATCCCTA ATGGTGTGAA      4200
     TGCCTTCCAC TGTGATCTTC ACACGTTGGC AAAAATCCAG AACGAGGTGG TCCGACAATT      4260
     TCCGGCCACA GAAGCTCGGT GAAACACCAA TCCCGGGCCA CGTAGGAGAA ATATTGCACA      4320
     TCGATATTTT CTCGACGGAT AGGAAATACT TCCTCACCTG TGTGGACAAA TTTTCGAAAT      4380
     TCGCCATGGT GCAGCCGATC CCGTCTAGAA CCATTGAGGA TCTAAAGCCA CCACTGCTTC      4440
     AACTTATGAA TGTTTTCCCC AAAGCCAAAG CCATCTACTG CGACATTGAA CCATCACTGA      4500
     AATCGCACAC AATAGTGGCC ATGCTGGAAA ACCATTTCGG CGTCAGCATC TCGAATGCAC      4560
     CGCCCCTCCA TAGCGTCTCC AACGGACAGG TGGAACGCTT CCACAGCACG TTGGTCGAGC      4620
     TCGCTAGGTG CCTAAAAATC GATAAAGGCA TAAATGACAC GGTGGAGTTG ATCTTGCTGG      4680
     CCACAGCCAG ATATAACAAG TCCATCCACT CCGTCATTAA CAAAAAACCG GCCGAAGTCA      4740
     TGCGGGCAGA TCCGGACGAT CCACAAAGTG ATGTCCAGGA AAAAATCAAA AATGCCCAAA      4800
     ACGTGACACG AAATCGAGAA AACGCCTCTC GGCGGAACAG AGTCTTCCAG GTCGGCGATA      4860
     AAGTCCTAGT AAAGTCAAAC AGACGACTAG GCGAGGAGAG AACTATCGAG GCAGAATTGG      4920
     GGACCACAGT CCCAATTAAA GGGAGGGTGG TCCACAAAGA CAACCTCAGG TGACCCAAAC      4980
     AGAGCCCAGT TGCGTTTCCC CCGGATTTTC TTTTCATTCT TTTCATTTAT AGCCACTTGG      5040
     CATAAGTTTT TTATTTGTTT TTCATTCGTA GCCAATTGGC ATAAGTTTTC ATTATTTTTC      5100
     GCTTCCCATA GCCACTTCGC GTAAGCCTTT CTTATATCCT TCATTACTCA TAGCCACTTG      5160
     GCTTAATTTT TTAACGTTTA ATTTACTTCC TCTTATTCGT CTATTGGTGG TGGGCAACTC      5220
     CATTCCGAGT ATTTATTAAT CAACCACGCA TATTACAGGT CGTTTCCAAC GCTTCTACTT      5280
     TGTCTCCTGG CGGTGGCATC GGCCCACGTC ACAGATTACA CCCACGCAAA TTACATCCCC      5340
     GTCATTGATG GCCAAGTCTT AGTAGAATAA GAATATGCCT ACGTCAGACA CTCTGCTAAC      5400
     CTCTCTGAGT ATAGGCGAGT GATTGACGAA ACCAACGGTA TGGTTGATAT GTTCCCCGAG      5460
     TCCCATATGA AGAAGCTCCT GAGCATTGAC ATCGCTCACC TTCGTGACAT GCTCGACTCG      5520
     TTGAGCGTCC ATCACAGAGT GGCTAGGAGC CTAGACTTCT TGGGAACTGC GCTAAAGGTT      5580
     GTCGCAGGGA CACCTGACGC AGAAGACTTT GAGAATATAA AGTTCACCGA AGCAAGACTA      5640
     ATTGATGCAC ACAAGAGCCA AATCGAAATT AACACCAAAA CACAAGTTCG AATCAACGAA      5700
     CTTACCGACA CCATTAATCA ACTTTTAAAG ATTTCAAAAG ATAAGCAAAT CGACACAGGC      5760
     CACCTTTACG AAATGCTATT AACACGCAAT AGAATCATTG TCATGGAACA TAGAACCTTT      5820
     TGCTTACAAT CACACTCGCA AAAATTAACG TAGTTAGTCC AGTCTTTCTG GACCATACAG      5880
     ACTTGGAGAA TGTTTGGGGC GAGGAGCACA CCAACACCCC CATAAGGGAA ATTTTGTCCG      5940
     TTGCGTCCGT AAAGGTTTTA CAATCCCTTA ACGTTTTACA TTTTATTATA AAATTCCCCA      6000
     AGATTGTTAT GGCCTGTAAT AAATTCACCG TCTTCCCAGT GGCTCACCAT AACACGGTAT      6060
     TGAGGTTAGA AGACAACATG GTGGCAGAAT GCAATGGAGA AATCCGTACC GTGAAGAACT      6120
     GCTTCAGATC ACTCGGGGCG ACATTTTGCC AGTTATCTTC GGTGAGCTCG TGTGCCCAAG      6180
     AACTCCACGC TGGAGGCATG GCACATTGCA ACACGCAGCA GAGCGACTTA CATCCTATCA      6240
     CATACGTCGA TGAAGGAAAT ATTATCATCA ATAATAATAA GTGACAGGCA CTCTCCTGTC      6300
     CTTAATATCT CGATGAAACA CGAGATCCTG AGCCTCCCAT ACCTTCACCG CTTGAGTGAA      6360
     AGGAATTTGG AGCAGATCAG GAAATTCGAA CAAGACGTCG ACGGATACCG ACTAGGTCAG      6420
     ATAGCGCTAA TTGCAGGAGC AATTTTCTGC GCTCTCATTT GCATCGGTCT AACCTGCCAA      6480
     CGAGCCATTA GGGTCAAGAA GTCCACAGCC CAACTTAAGG AAGTACTCTC CAAAATAGGG      6540
     TCGGCCGAGG ACGGCCTCAA TCTTGAGGGG GGAGTAGTTA ACTAAGTTAA CCGGACTGAT      6600
     CGTCCGCTGA CCAGCATTTG GCCGGAAGCT CGAGCATAGC CGGCAAAGCT CTGCACTTTG      6660
     GCAGAGGCCG CTATGAAGCT CTTCTCTTTG TAAGCTTTAA GCAGTTCGTT TTGGACACTC      6720
     ATAAAATAAA GAGCCATCGC TCATTAACCA ACAACTCCGG CATTCTGTCG TTAATTTTAT      6780
     ATTTGATCAT AGAAATCTGA GTCCCTAGGC CAATTGCATT AAGGAAGACA GTCATCTTCC      6840
     CAACGTAATC ATCGTAATTC TCCAACTGGA TTTATCACCC TCTTCCCCTG TAAGAGAGAC      6900
     ACCATCAGCC AACCGGCAAA TCATGGGAGA CTGCAGCGAG GGACCCCCTG CAGCACCCCC      6960
     ACATTTAATA ATT                                                         6973
//
ID   INVADER    standard; DNA; INV; 4032 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063430; invader1.
XX
FT   source          nnnnnnnn:1..4032
FT   SO_feature      five_prime_LTR ; SO:0000425:1..423
FT   SO_feature      three_prime_LTR ; SO:0000426:3609..4032
FT   SO_feature      CDS ; SO:0000316:456..1321
FT   SO_feature      CDS ; SO:0000316:1919..2320
FT   SO_feature      CDS ; SO:0000316:2390..2923
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 4032 BP; 1201 A; 774 C; 956 G; 1101 T; 0 other;
     TGTCGCAGAT CATTTAAATG AAACGAAATT TCGTGTTTCT GCTTGGCACG CGCCATGCAG        60
     ACGCCTCTTT TTATTTTTCT GATGCGCGGC AGACAACCGT TAGAGTTTCT GCCGAACGTA       120
     GTCTGGTCGC GGGTAGGAGC GGGGGGGGAA GTAGATGTCT GTACGAAAAC GAGAAGCATA       180
     CAGAAAAATG CGGTGTGCAT AAGTATTGGT GTATGCGGAC TAGAACAACT GTCATAATTG       240
     TGTTGGTATT GCATGTAAAG TCAAGAACTA CGCATAATTC TGATTTTGTG AAGAAGAGAT       300
     CAGTCAGTCA GTTTTCGATC GTTACGCATA ACAGACATGC CTCGCTCAAG CGCCAGAAAA       360
     CGTCGCGCGA ACCATAACGA GAGTAGTGAA GAGGAAGAAG GGCATCCTGA TGACTCTTCG       420
     ACATCAGAAG TGGGATCGCC TATACCTACT TTGAACAATG AAAATAGTTT GCTGACAATT       480
     TTGGAGTCGC AAAATCGTCA TTTTTCCGAA CTTTTGAAAC AAGTGCAACA CTCACAAAGA       540
     GAGTCAAGAG AATCGTTTGC TGTGGTATTG CCCAGGTTTA ATCCTGAACG TGCGGGATCA       600
     GATGCGCAAT CCTGGTGTTC AACGGTGGAC TACATCTTGT CCGAAAACCA ACTGGAAGGC       660
     AGCGCTCTTG TGATGACCCT TAGCAAATCA CTGGAAGGAA GCGCGTCTCA TTGGCTTTCA       720
     CAGACTTGCT TTCCTGGTAT ATCATGGCCA CAGTTCCGAG AATTGTTTTT GCTACATTTT       780
     GCGGGAACAG AAACATTAGC GGCAGCCGTT ATGAATCTGC TAAATGGACG CCCTGCGGAA       840
     GGCGAGTGCC TGTCGTTATA CGGAAGCCGA ATGGTTACTT CGCTTATGGC CAAATGGAAG       900
     ACGCTGAGCG TGGAGCAAAT CGCAGTCTCC ATTACACTGG CGCATGCAGC TGGAATTGAC       960
     AGGCGTTTGC GGCGTTTAGT TTTCACTTCC GACATCAACA CTCGGAACGA GCTGAACCAA      1020
     GAACTAAAGG CCTATTCATT CGACGCTAGA CCGAGCCACC TTCCAAACGA TGGTACATCA      1080
     GAGCCGCCAG GAAAACGAGC TAAGCCCTAC TTCAAGTGTC ACAACTGCGG AAAGCCTGGT      1140
     CATAAAAAGG CGGATTGTCG ATCAAAAACA GTGGCAGTGC ACGTTCAGCA ACCCGACAGG      1200
     CAACCATCAG GGAAAGACCG GTCTACTTTG ACTTGTTTCA ACTGCGGAAA AGCTGGACAC      1260
     ATCTCCACCG TATGTCCTGA TCGTCAGGAG CGTTCATCGT CTAGCAAAAA TAACATTGTT      1320
     TAAGATGTCA ACATCTGTAC CGTTTTTGAG CCCGTACGGA CGTTTTCGCA ATCTGGTGAG      1380
     TCGTTCCAAT TTTGTTTTGA TTCTGGAGCC GAGTGTTCAC TCATCAAGGA GGCTACTTCG      1440
     CAGAGACTAT CTGGATCCAG AATGGGCAAC GTAGTTATTT TAAGGGGTCT TGGTAGCAAT      1500
     ACTATTTGTA GCACTTTGCA GATATTGGCT AATGTTTTGA TAAGTGAACG CTCATATGAA      1560
     ATATTGTTTC ATGTAGTGTT AGACAATTAT ATTAAGTATG ACGCTCTGAT TGGTCGAGAT      1620
     ATTTTGAGCC AGGGAGTCGG TGTGACAATA ACATCAAAAT CTCTTACTAT GTTTAACGAA      1680
     AAATCTATAT TGTCTGTTGA AGTTTCCGAA AAGAATCCCG ATTTGGCTCA TGTTGACTTT      1740
     CTGTCTCGGA ATCCGGTTCC AAAAATTGTC AAGAATTCCA TAGGCGTAGT CGAAAGGCAT      1800
     ATCAATCTGA CAGAAATATC CGACAACTGG TTATTGGCTG AACAGCAAAG AGACGAAGAA      1860
     ACTTCTTCCA TTATCTCTAA ATTGCGTAAT AATGAATTGT CCGAGGATTT GGCCAAGACT      1920
     TATGAACTAC GGTCTGGAAC TATGTACCGA AAAATTCAAA GAAATGGAAA GACTCGATGT      1980
     CTGCCCATAA TCCCAAAGCA GTTTAGGTGG TCCGCTGTCA ACAACGTACA CGAGTCAGTT      2040
     ATGCATCTCG GGTGGGAGAA AACTCTTGAG AAAATGTACG AGTTCTATTG GTTCGATAAA      2100
     ATGTCTAAGT ATGTTCGCCA ATTTGTGGAC AACTGTATCA CTTGTAGATT ATCAAAACCT      2160
     CCGTCTGGCA AAATACAATC CGAACTCCAT CCCATTCCTA AAATTGACAT CCCGTGGCAT      2220
     ACGGTTCATG TGGATATTAC AGGTAAACTT AGCGGAAAAA GCGACCAGAA GGAGTATATA      2280
     ATTGTGATGA TAGACGCATT TACCAAATTT GTCTATCTCT CTCATACTAC GAAGCTAGAC      2340
     ACCGATAGTT GCATTAAGGC AGTGAGGTCT GTTATATCAT TATTCGGTGT CCCCTCCCGA      2400
     CTTATTGCTG ATCAAGGTCG TAGTTTTGCT AGTTCAGCTT TCCGTGATTT CTGCTCAGCA      2460
     CAGAAAATGG ATTTACATTT AATTGCCGCA GGTGCTAGTC GTGACAATGG CCAAGTGGAG      2520
     CGAGTCATGA GTACTCTAAA GTCCATGCTG ACTGCGGTTG AAACTGGCCC AGGATCTTGG      2580
     CAGGATTCTT TATATGAGAT TCAGCTGGCC CTTAATAGCA CGCCCAATAG AGTTACTAAA      2640
     GTCAGTCCAT TAGAGATACT TATTGGCAGA GAAGCAAGGC CATTTGGGCT TACACCTGTT      2700
     GTAAAAGAAC AAAATATTGT CGATGTTGGC TTAGTTAGAG AAATAGCAAA ACGCAACATG      2760
     GAAAAGAATG CCAAAATTGA TAAAGCTAGA TTCGATAAAA ACAAAGCCAC TATTGTAAGA      2820
     CACAAGCTAG GAGACCATGT TTTACTTAAA AATGAAGAGC GTCACCAGAC CAAATTAGAT      2880
     CCTAAGTTTA AAGGTCCATT TGTAGTGGCC GAAGTATTAC CAGGAGATCG ATATAAACTC      2940
     AAAGCATTAA ATAATAACCG AACTTATAAA TATTCTCATG AATCTTTGCG ATGTATGCCT      3000
     GAGAAGAGGA TTACCACAGT ATTTGAAGAT GAAGGCACAG AAGATGCCAG TGATCAAGCC      3060
     AGTGAGGGCT GTGATCTTGA GAATGACTAA AAATTTGTAA ACCTCCGGAC CTATTCCAAA      3120
     TGCGACTTTC TCTACCTCAT GGGTGCCCGA GTTAAGTGGT TCGCCATTTT GTTGCAGTTA      3180
     AGCTTAAATT TGGTAACGGT TGGTGGTGTG AGTTAACTGG CCGGCTTATA GACTGCGTCA      3240
     TCTGGGTGCC ACGTATGTTG GCCGGATTGT CGAGTTGTAA GCTGTGAGCT AGGCTAACAA      3300
     AAGATGGACT GGCCGGTTTG AAAAACTGTG CGCTAGTAGA AAAATGTATT GAAAATCAAG      3360
     AACGTTAACG ATTTATGTTT GAAGAAGACA AAATTATGAT TGTTTGATTG AAAGCTGATG      3420
     GTGGTCCGGT TCTCATGGCT TAAATGTAAT AAATGAAATG TTTTAAATAT TTGTATTGGT      3480
     TTGATTTAAA GTAATAAAGA ATGAAGAATA ACTTTATATT TTGAAAAAAA AAATAAGCCT      3540
     TTGATAGATT CTGTTTAATT ATTGAGAGAC TGTTAGCACA CGAGGACGTG TGATAGGTCA      3600
     GGAAGGCCGT GTCGCAGATC ATTTAAATGA AACGAAATTT CGTGTTTCTG CTTGGCACGC      3660
     GCCATGCAGA CGCCTCTTTT TATTTTTCTG ATGCGCGGCA GACAACCGTT AGAGTTTCTG      3720
     CCGAACGTAG TCTGGTCGCG GGTAGGAGCG GGGGGGGAAG TAGATGTCTG TACGAAAACG      3780
     AGAAGCATAC AGAAAAATGC GGTGTGCATA AGTATTGGTG TATGCGGACT AGAACAACTG      3840
     TCATAATTGT GTTGGTATTG CATGTAAAGT CAAGAACTAC GCATAATTCT GATTTTGTGA      3900
     AGAAGAGATC AGTCAGTCAG TTTTCGATCG TTACGCATAA CAGACATGCC TCGCTCAAGC      3960
     GCCAGAAAAC GTCGCGCGAA CCATAACGAG AGTAGTGAAG AGGAAGAAGG GCATCCTGAT      4020
     GACTCTTCGA CA                                                          4032
//
ID   INVADER2   standard; DNA; INV; 5124 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063429; invader2.
XX
FT   source          nnnnnnnn:1..5124
FT   SO_feature      five_prime_LTR ; SO:0000425:1..265
FT   SO_feature      three_prime_LTR ; SO:0000426:4859..5124
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 5124 BP; 1977 A; 662 C; 1178 G; 1307 T; 0 other;
     TGTAGTAGGC TAGAGGTACA CATACATAAG TTCAGTTCAT AATAGCAACA TAGTATATAA        60
     ACATTAAGTA CTTGTTCGCT TTCGGGTGGC ATTCTCTCTG TTTCGCAACA TCGGCCCTGT       120
     AGCAACAAGC ATAGAGGCAG ATCGCAAACG GAGAGGGAGT CAGTCGAATG CTAAAGCTGA       180
     ACACGGAAAG TAACAAATAA ATCAAAGAGT CCAACTCCTG CCTTTGTGTG TTTTAGTTAA       240
     TTAAGAGGAT ATATAATACC CCTACAATAT CAGAAGTGGG CCGATCACGA GCCAAAGAGA       300
     AAAAAAAAAT GAATATAAGC AATGCATCGA CGGCGCAATT AAAAGGATGG TTGAGTGAAG       360
     TAAAAGAACC AACCACGGGA ACAAAAAGAG AATTGATTTT GCGTTTGAAT AATTTAACAA       420
     ACGAAAAGCG AAATCAATTG AAATTATTAT TAAAAAGCGA GGAAGAAGAT TTCGACGGAA       480
     GCAGCAATAA TAATGTTCAA AAAGGAAAAA GAAATAACGG AAAAGACGGA GAGCATAAAG       540
     ACGACGAAAG TGACAGCGAA GCTGGAGATA GCAACGAAGA CGGCGATGAG AAGAGCACTG       600
     TGCGCAACGA CAAAAGTAAC GGCGAACATG ACGACAAAAG CGGGGTACGC AGTTACAAGA       660
     ACAACAGTGC AGACGGCGCC CGCAACAACA ACAGCGGCGA CGGGAATAGC GACGAAAACG       720
     AAGTTTGCGA CAGCGAAGAC GGCGACGAAG ATGGCGGCGG TGAGAAAAGC AACAAAGAAT       780
     GTGGCAAGAA TAAACGAAAT ACAGTGGGAC AAGCTGTGCA AAATATGGAT TTATTATTGC       840
     GTATGGCAAC CGAGGCAGTA AATGAATTTT CGGGAGATAC ATGTGCGCGC AAATGGATCT       900
     TACAGGTGAA AAACATAGCC AGCGTTTATG GAATAAAGGA ACCGTATATA AAGATGTTGA       960
     TTGTCAGTAA GATAAAAGGA AAAGCATGCA TGTGGTTGCA TGCAGATCCA GAACGTGTAT      1020
     TGCTACCAAC GGAGCAGTTG GCGGCTGAGC TAATATCAAT GTTTGGTGAG AGGAAGTCGA      1080
     AGTTAGAAAC AAGGCGAAAA TTTGAGGAAC GAAAGTGGAC AGCGAGCGAA AGCTTTGTTG      1140
     CTTATGCAGA CGATAAGGTG ATGCTTGCAC ATGGAATAAA CATGGATAAG GAAGAATTGG      1200
     TGGCGCTCCT CATTGAAGGT ATTCCGAATC AAATGCTACG TAACCAAGCC CGTATCCAAT      1260
     GCTTTGAAGA TATCCAGCAC ATAAAGAAGG CATTTGCGGA AGTGAAACTA CCGAAAGTGG      1320
     ATGAAGCAGA CAAGAAGGTG GCATCGGTGA ACAATAATAG CAGCACACTC TTGCGTTGTT      1380
     TCAATTGTAA TTCGAAGGGA CACTGGGCCA AAGAGTGCAG GAAGCCAAAG CGCGAAAAAG      1440
     GGTCATGCTA TGCCTGTGGT GAGATGGGGC ACTTTGCAGC AAAGTGCCTG AAAAACAAGA      1500
     ATGGGGATGA AAACAATTAC GTAAGATATT TTGAAATTAA TTTTATGAAC AATGCTAAAT      1560
     CAAAATTTAT TACAGCATGC CTCATAGACA CGGGAAGCCC CATTTCGTTC ATAAAAATTA      1620
     GTAAAGTACC CAAAGATGTT ATTGGAGTAC CAGTTTTAAG TTCATTTTAC GGATTAAACA      1680
     AAAGTCCCTT GAAAACATAT GGAAAAATAT TGTGTTACAT TATGAAAAAT TTGAATAAAA      1740
     TACACTTTAA TTTAATAATG GTGGCAAACG AGTCTATGAA TCATGATGTA GTATTGGGAA      1800
     GAGATTTTAT GGAAGCATGT AATTTAATCT TGAATCTGGA CACCTTGAAA ATGATTACAG      1860
     TGGATAAAAT TGAAAGTCGA TGTAACAAGA AAAGCGATAA AATGTTAAAG GAAGAAAATA      1920
     TGTACAACAA TAATAAAACA GTTAGCGATA GTGTTAGTCA AGGTAGTAGT AAAAGTCAAA      1980
     TGAGTAGTGA CACGGTTAAA AATAAATTAG AGAAAGCTGT CAATGCTGAA ATAAGCAAAG      2040
     TGGAGAGGGA AATGTTTGAA ATTAATGTAA TAGATGACTC AATTGATTAC AAAATAGGTG      2100
     ATCAGGTGGA TCATAGTATA AAATGTCAAT TTATTGAGTT TGTAGAAAAC TGTTATGTTA      2160
     ATAAAGAAAG ACCGAATGAA CCGGAGATTC GGTGTGAAAT ACAATTAAGA TTAAATGACC      2220
     TGAAACCGTT TAGTTGTTCT CCTAGAAGAT TAGCATATAC TGAAAAAGAA AAGCTGCAGA      2280
     TTATCTTAGA TGAATATCTA AAAAACGGAA TTATTAAACC GAGTGATTCA GAGTATGCAT      2340
     CTCCGATGGT GTTAGTGAAA AAGAAAACAG GAGACCTAAG ATTATGTGTT GATTACAGAA      2400
     AACTTAACAA AACAATGGTC AAAGATAATT ATCCTTTACC ATTGATTGAT GATCTGTTGG      2460
     ATAGATTAGT AAATAAAACG ATATTCTCGA AGTTAGATCT TAAACATGGA TACTTTCATG      2520
     TTTTTGTTAA TAAGGAATCA ATGAAATATA CATCTTTTAT GACGCCTTTA GGACAGTTTG      2580
     AATTTTTAAG GATGCCAATG GGGCTGAAAA ATGCACCGGC GGTCTTTCAG AGATTTATTA      2640
     ATAGAATTTT CGAGGATATG ATAAGGCAGG ATAAAGTTAT TATATATATG GATGACATTA      2700
     TGATAGCTAG CAAAGGAATT AAGGAACATA TGGAAGTACT TAGGGAAGTT TTTGACAGGT      2760
     TGACGAGGAA CAAATTAGAG CTGAGAATGG ATAAATGTGA GTTTCTGCAA TCGAGTGTAC      2820
     AATATTTAGG ATTTTTAATA ACAAGTAAGG GAATACAGGC CAATGACAAG GGAATAGAAG      2880
     CAATTAGAGA TTTTCCAGTA CCAGATAAGG AGCATGGTGT CAGAAGCTTT TTAGGATTGT      2940
     GTTCATATTT TAGAAGATTT ATTAAGGGTT TTTCAACGAT TGCAAAACCT TTATATGACT      3000
     TATTAAAGAA AGACAAAGAA TTTTCGTTTG AAGAAAAAGA GTTAGAATGT TTTGAGACAC      3060
     TTAAGAAAAA GTTAGTGGAA GCTCCAGTGT TAGGGTTATA TTGTTATAAG GATGAAATAG      3120
     AGTTACATAC AGATGCAAGT GCACAAGGTT TTGGTGCAGT GTTATTGCAA AAGAAAGAGG      3180
     ATATGAAATG GCACCCTATA TTTTATTACT CGAAAGCCAC AACAAAGGAT GAGGCCAAAT      3240
     ATCATAGTTT TGAACTTGAA ACATTGGCCA TCGTGTATGC ATTAAGAAGA TTTAGAATCT      3300
     ATGTACAGGG AAAGAGATTT AAAATTGTTA CGGATTGCAA CGCATTAAGT CTAGCGTTAA      3360
     ATAAAGTAGA ATTAAACCCT AGGATTGCGA GGTGGGCATT AGAACTATTA GAGTACGATT      3420
     TCGAGGTAGT TCATAAAGCA GGAAAGCATA TGCAACATGT GGATGCATTG AGCAGAAATA      3480
     CGAACATATT AGTGATAGAA ACTAATACTT TTGAAGATAA TTTAATTATT TGTCAAGCAA      3540
     AAGATGAAAA GTTGAAAGAT ATTAGGAAAA AGTTAGAGAA AACGGAAGAT AAAATTTTTG      3600
     AAATGAGAAA TGGTGTACTT TATAGGAAGG CAAACGGTGG AAGATTGTTG TTTTGTGTAC      3660
     CAGAAGAAAT GGAAGAAAAA ATTTTATATA AATATCACAA TGAATTAGGT CACTTAGGGA      3720
     GAGATAAGGT TATAGATGCT ATTGGTAAGA CTTATTGGTT TTCGAATATG AAAGAAAAAG      3780
     TTGTTAGGCA TATAGGAAAT TGTTTGAGAT GTGTGGCATT TTCACCGAAG TCGGGAAAAG      3840
     AAGAAGGAAT GCTGCATAGC ATCCCAAAGG GAAATGTGCC GTTTGAGATA ATACACATCG      3900
     ATCATTACGG ACCAGTAGAT AACGGTAGAA TAAAGAAACA TCTGTTTGTA ATAATAGATG      3960
     GATTCACTAA ATATGTTAGG TTATACGCAA CAAAAACAAC GAACACAAAG GAAGTGATTC      4020
     TAGCGTTAAA GGATTATTTT AGATCATATA GCAGGCCGAA ATTTATAGTA TCAGATAGGG      4080
     GGACCTGCTT TACATCCGAA GATTTTGCAA AATTTATGGG AGAGTATAAT ATTAAACACA      4140
     TAAAGATAGC GACAGGTTCA CCCCAGGCCA ATGGACAGGT AGAAAGAGTC AATAGAATAG      4200
     TAGGGCCTAT GATAGCTAAA TTAACAGACA TTGAAAAGGG ATTGCATTGG GATGCAGTTA      4260
     TTGAAGACGT AGAATTTTCT CTGAATAATA CCAAACAAAG AAGTGTAGCG CAATCTCCCA      4320
     GCAAGATGTT GTTTGGAATT GAACAAAAGG GAAAAGTTGT TGATGAATTA AGACAAAAAT      4380
     TAGAAGAGTT AGATAATGTT AGTGAAATTA GAGACTTGAA AGAAATTAGA AGAAAAGGAT      4440
     CGGAATCGCA ATTAAAAGCA CAGAGGGATA ATGAAAAAAG ATATAATAAT AAGAAAAAAG      4500
     AAAGTACGCA GTACAAAGTA GGAGATTACA TTATGGTTAA GAATTTCGAT AGTACAGGAG      4560
     GAGTTGCTAG AAAGCTAATA CCTAAACATA AGGGTCCATA TGAAATAGAG AAGGTATTGA      4620
     AAAATGATAG GTTTTTAATT AAAGATGTTG AAGGTTTTCA ATTGGCGCGA AATCCATATC      4680
     AAGGTGTCTG GAGTAGTCAA AATATTAAAC ATTGGATAGG GAGTAGAAAG TAAATTTGTA      4740
     TAATTAAAGA TAAGAAAAGT AAAAAAAATG TAACAAATAG CGGCTAAGAA CAATGTAATA      4800
     GTTATAAGTT GGAAATTTCG ACAAGATCAG GTGATCTTAA ATGTCAGGAT GGTCGAATTG      4860
     TAGTAGGCTA GAGGTACACA TACATAAGTT CAGTTCATAA TAGCAACATA GTATATAAAC      4920
     ATTAAGTACT TGTTCGCTTT CGGGTGGCAT TCTCTCTGTT TCGCAACATC GGCCCTGTAG      4980
     CAACAAGCAT AGAGGCAGAT CGCAAACGGA GAGGGAGTCA GTCGAATGCT AAAGCTGAAC      5040
     ACGGAAAGTA ACAAATAAAT CAAAGAGTCC AACTCCTGCC TTTGTGTGTT TTAGTTAATT      5100
     AAGAGGATAT ATAATACCCC TACA                                             5124
//
ID   INVADER3    standard; DNA; INV; 5484 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063428; invader3.
XX
FT   source          nnnnnnnn:1..5484
FT   SO_feature      five_prime_LTR ; SO:0000425:1..298
FT   SO_feature      three_prime_LTR ; SO:0000426:5186..5484
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 5484 BP; 1941 A; 1014 C; 1192 G; 1337 T; 0 other;
     TGTGGTAGGA TGAACACTCA TAAGGCCCAC GAAGCATACG AGGAAGCATA CGAAGAAGCA        60
     TACGATCATA TCCCCGTTAG GAATAAGTAT ATCATTGCTA TCTCGCTCTT ACTTATAAGC       120
     TAGCATTAAG AGATAAGAAT GTACACCTAG CTCACTCTCT CTTTTGAAAG AGCATAAGAA       180
     AAGAGGAATA CGCGAGACGC GGCATTCGGT GGCGTGAGCT TGAAGTGAGA AGTCGAATAA       240
     AGAGATTGTG AAGTTATTTA AAGGAAGGAG CACGTGTATT CATTTTTCGG CGTCCACAAC       300
     ATCAGAAGTG GTCATTACCC ACTATGCCTG ACACTAAATG GAATCAATTC TCAGTGCCCC       360
     AACTAAAGAA GTGGTTGGAA GCTCTTGGAT GCCAGACTTC CGGCACAAAA GCGGAACTAA       420
     TAGTGCGTCT GCAGGCCATT TCCCCAGAAA CGCGTGGCGA TTCACCGCCA AATAACGGAT       480
     CAGCAGCAGA AGAGTTGGAG GAATTGGATG GAGATGCAGC CTGGCCAAAG CAGAGAGAGC       540
     CACAGGGTGG AGACACACGC ACGATCCCGT TCGACGAGCA GTCATTGCAG TCAGAACCCC       600
     CGGAGAACCT CGATCTGGAT CAGCTATCGT TGGTGGATGC AGAGAGAGCC ACTCTAAAAG       660
     AGCTTCGGGA CGAGATAGAG GCAAACATGG CTGTGCTGCA GAGGATCCAA GCGGATATCG       720
     ACGACGCGAA CAAGAGCAAG TCCGCTCATG TTCGCCAGAT CAATGACGTC ATCGAGAACA       780
     ACAGCAACGG AAACCACGGC AATGTTAACA TATGCGCTAA CAGCACCGAC GCCAATGTTA       840
     ACAGCACCAA GGTGACTATC GCCGCCGATA ACATTGATAC GGGACATACC AGTTTTGGAA       900
     AAGAAACCGC TGGTAGTGTT GTTCAGCACC AGAGTCGAAA TGTAAACAAG CTTCTGGAAT       960
     CTCCTGCAAC ATCGCTTGCC TTGGCAAAAG AGGTAACGAT GGAGTTTGAC GGCAGCTTAT      1020
     GTGCGCGCAA TTGGGTCACG CAGTTTCAAA ACATCGGAAA GATTTACAAT TTGGACGACG      1080
     GATGCATGCA CATGCTGCTA ATTGCCAAAC TAAAAGGAAA CGCACAGCGC TGGCTGCACG      1140
     CAAGCGCCAC ACGCATCCTA GAATCGACCG ACCAGCTATG CGAACAGTTA ATCTTGACAT      1200
     TCGAGATCAA GATGTCAAAA GGGGAACTGA GGAGCGCATT TCAAAAACGC GAATGGCATC      1260
     CGGATGAGAA ATTTGCTGTT TACTTCGAGG ACAAGGTGAT GCTGGCCAAC GACATCAACA      1320
     TCGATCTAGA GGAGCTCCTG GAAAACATCA TTGAAGGAAT CCCAGCACCA GCGTTGCGCA      1380
     ACCAGGCGCG CATACAGCGT TTCTCCGAGC CGATGCAAAT TCTGCGGGCT TTCTCGGAAG      1440
     TCCGTCTGCC GAAGCACAAA ACAGGGAGCA GTTCATCAAA GCGCCTTACT GGAGGAGGTG      1500
     CAGCCAATAA GGACTTACGT TGTGCCAATT GCAACTCCAA AGGGCACTTC GCCAGGGAGT      1560
     GTCTCAAGCC AAAGAGGGAG CCCGGATCCT GCTATGGCTG TGGGGCATTT GGGCACTTCG      1620
     TCGGACAATG CCCGGAGCGC AAGAGCGCCA ATATCAACAA TTATGTAAGA CTTGTCAAGA      1680
     TTTTTTTTCA CAATAACTAT AAAACCCCAT TAATTACAGA ATGCCTCATA GACACAGGGA      1740
     GTCCAATATC ATTTACAAAG TTAAGCAGTG TATCCAAAGA AATTAATTTA GAATCCGCTT      1800
     CAGGAACCTA TTTCGGGCTG AATAAAAGCC AACTGACATT ACATGGAAAA AGCTTATGTT      1860
     ACATTATAAA AGAAAAAGTT AAATGTTATT TTTATTTGTA CGTGGTCCCA GACGAGTCTA      1920
     TGAGTCATAA TGTAGTTCTT GGACGAAATT TCATGGAAGC GTGCCAGTTG AAACTGGATC      1980
     CAGACGCCTT GGGAAGGATA ACGGTCAACC CAGTCGATAG TAAAAGATAT AAAAAAGCAA      2040
     ATAGTAAAAC AATCAGTTCT ATTGTTAGTG AAACAGTTAG TGAAACAGTT AGTGAAACAG      2100
     TTAGTGAAAC AGTTAGTGAA ACAGTTAGTG AAACAGTTAG TGAAACAGTT AGTCAAATGG      2160
     ATAATGAAAC AGTTAATAAG ACGATTAGTA AAACAGCCAA CGAAGCGAGT AGTATAGTTA      2220
     GTCAAACTGT TAACGAAGCA GGTAGCAAAA CAGTCATCGA AACAGTTATG CCTTTAGCCA      2280
     ACTTCACGAC GGATTCCGGA CCTTATGCTG CGGTTGTGCC CAGTTATGAA GAAGCTGTTA      2340
     GAGAAATTTG TAGCATTGAA CACTTAGAGG ATGAGCAAAT GAACTTCATA TGCGGCGAAA      2400
     ACAATAACCA AGCCTTAAAC AGTCAGTTAA AGGAGATTAT TAAACGCAAC TACTTAAGCG      2460
     TTAATAAGCC TACCGAGCCT TTAGTCAAAT GCGAAATAAA ACTTTGTTTA GAAACGTCAA      2520
     AACCATTTAG CTGCGCCCCA AGAAGACTTG CCTACTCAGA AAAGGAAAAA TTACAAAAAC      2580
     TATTAGATGA CTATTTAAAA GAGGGAATTA TTCAACCTAG TGTATCAGAA TATGCTTCAC      2640
     CAATTGTTTT AGTCAAAAAG AAAACAGGAG ACATACGGCT ATGTATAGAC TTTAGAAAAC      2700
     TGAACAAAGT TTTAATTAAA GACAATTATC CGATACCGCT TATCGATGAC CTTCTAGACA      2760
     AGCTAGTCAA CAAGAAAGTT TTTTCGAAAC TTGATTTAAG AAACGGTTAT TTTCACGTAT      2820
     TCGTTAATAA GGAATCAGTC AAATACACCT CATTTGTTAC ACCGTTAGGG CAATTCGAAT      2880
     TCCTCAGAAT GCCAATGGGC CTAAAAACTG CATCGGCGGT GTTCCAAAGG TTCGTAAACA      2940
     AAATTTTCGA GGATCTTATA AGGGATAACA AAGTAATTGT ATACATGGAC GACATCATGA      3000
     TTGCTAGCAA GAACTCGGAG GAGCATTTAG AAACTTTAAA GGAAGTGTTT ATCAGATTAG      3060
     CTCAAAATAA ATTGGAATTA CGAATGGATA AATGTGAGTT CCTTCAGACA AATATTAAAT      3120
     ATTTAGGATT CATTATAAAT GGTGAAGGCA TTAGGGCTGA TGACAAAGGA ATAGATGCCA      3180
     TACAGCATTT TCCAGTTCCA GACAAAATAC AAGCCGTTCA AAGTTTTCTG GGCTTATGTT      3240
     CATACTTCCG TAGATTTATA AAAGATTTCT CAACATTAGC GAAACCTTTA TATGACCTTT      3300
     TGAGAAAAGA TGAAAAATTT AAATTTGGAG AAAAGGAAAT GAGCTGTTTC TCAACTCTTA      3360
     AGGAAAAGCT GGTGCAAGCA CCGGTCTTAG CAATTTATAA TTTCAAAGAC GAAATAGAAC      3420
     TGCACTGTGA TGCAAGCGCT CTTGGTTTCG GTGCGGTGTT ATGTCAAAAA AAAGAGGATG      3480
     GAAAATTACA CCCAATATTT TATTTTTCAA AGCGAACAAC AGTCGCTGAG GCAAAATATC      3540
     ACAGTTTCGA ATTGGAAACA ATGGCAATTA TTCACGCACT GCGTAGATTT AGAATATATT      3600
     TGTACGGAAA ACGCTTTAAA ATTATAACTG ATTGTAATTC TCTCACTTTG ACGCTTAACA      3660
     AGACTGAACT TAATCCGCGA ATAGCTAGAT GGGCGTTAGA GCTCCAGAAC TACGATTATG      3720
     AGCTCATACA TAGAGAGGGT AAAAGGATGC AGCATGTTGA TGCTCTTAGT AGATGCACGA      3780
     ATATTTTGAT AGTGGAATCA AATACGTTTG AAGACAATTT AGTAATCTGC CAAGGCAAGG      3840
     ATCAAAAAGT TCAAGAAATC AAGAAACTGC TGGAAAAAAA TGAACACAAG TTGTTCGAAA      3900
     TGAGAAACGG AATAATTTAT AGAAAATGTA ACGACGGCAG ACTTTTATTT TATGTTCCCA      3960
     CAGACATGGA AGATCATATT CTATATAAAT ATCACAATGA GATCGGACAC ATAGGTAGAG      4020
     ACAAAATGTT AGATGTTATT TCTAAATCTT ATTGGTTTCC CAATGCCAAA GACAAATGTT      4080
     TGAGCCATAT AGAAAATTGT TTAAAATGTG TTGCGTTCTC TCCTAAGACA GGCAAGGAAG      4140
     GATTTCTGCA CTGCATTCCG AAGGGCAGCA AACCGTTTGA ACTAATACAT ATCGATCATT      4200
     ACGGCCCAGT CGACTCAGGC AGATCCAAAA AACATATTTT TGTTGTCATC GATGGTTTTA      4260
     CGAAGTTCGT ACGTTTATAC GCCACAAAGA CCACTAATAC AAAGGAAGTC ATTACAGCCC      4320
     TGAAGGACTA TTTTAGAGCA TACAGCAAGC CTAAATGCAT CATTTCAGAT AGGGGAAGTT      4380
     GTTTTACATC CAAGGAATTT GATGACTTTA TGTTAGAGTT CGATGTTAAG CATATGAAGA      4440
     TTGCGACTGG TTCACCCCAA GCAAACGGAC AGGTTGAAAG AGTCAACAGA AGCCTAGGTC      4500
     CAATGATAGC GAAACTGGTA CAACCAGAGA AAGGCATATA TTGGGACACA GTAATAGATA      4560
     AAGTTGAGCA CGTCTTAAAT AATACACAGC ACCGCAGCAT CAAACAAACT CCAAGCAGAG      4620
     TTCTTTTTGG TTTAGAGCAA AGAGGAAAAA TAGTAGACGA GTTAAAAGAA AAACTAGAGG      4680
     AATTAGAAAA TACTGAAGAA GATAGGGATT TGGTAAAAAT TAGAAATGAA GTTGAAAATA      4740
     ATCAAAAAAA GGCTCAAGCG TATAATAAAA CACATTATGA CAAGACCGCC AGACAGCCAT      4800
     CAGAATACAA AAAAGGAGAT TATGTGATGG TTAAAAATTT CGACAGTACA GCAGGCATCT      4860
     CTAGAAAATT GATTCCAAAG TGTAAAGGCC CATATGTGAT ATCTAAAGTA TTAAGAAACG      4920
     ACAGATTCTT GTTAAAAGAC GTAGAAGGTT TTCAGATATC TCGTAACCCA TACCAAGGTG      4980
     TCTGGAGCAT CCAAAATATT AAGCATTGGA TAGGCAACAA GAAAAATAAA CGAAGACACA      5040
     ATTAAACAAT AATAATAATA TAATAATAAT AATAACAGAT TAATATTGTA TGTACATATG      5100
     TATAAATAAG GTAAAAGAAT TCATCATACA ACTAAGCAAT CAATGTAAAC CATGATCAGG      5160
     GGATCAGCTA GTCAGGATGG CCGAGTTGTG GTAGGATGAA CACTCATAAG GCCCACGAAG      5220
     CATACGAGGA AGCATACGAA GAAGCATACG ATCATATCCC CGTTAGGAAT AAGTATATCA      5280
     TTGCTATCTC GCTCTTACTT ATAAGCTAGC ATTAAGAGAT AAGAATGTAC ACCTAGCTCA      5340
     CTCTCTCTTT TGAAAGAGCA TAAGAAAAGA GGAATACGCG AGACGCGGCA TTCGGTGGCG      5400
     TGAGCTTGAA GTGAGAAGTC GAATAAAGAG ATTGTGAAGT TATTTAAAGG AAGGAGCACG      5460
     TGTATTCATT TTTCGGCGTC CACA                                             5484
//
ID   G2    standard; DNA; INV; 3102 BP.
XX
AC   AC006215;
XX
DR   FLYBASE; FBgn0063507; G2.
XX
FT   source          AC006215:18012..21113
FT   SO_feature      CDS ; SO:0000316:264..2960
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
XX
SQ   Sequence 3102 BP; 877 A; 949 C; 642 G; 634 T; 0 other;
     CGAAGACCGG CCACCCCTTT CAGCAAACCC TGCACCATCA AGCTCCCAAG TATCTCCAAT        60
     ATGAGCTACA GAGATGCGCT CATGTCTACC CAAGTGCCTC AGCAAACCAA TCCCAACCAA       120
     ACCCGTCAAA CCCCACCTGA ATCTCCGCAA CCCAGTAACA TGGAACAAAT GTTTGCTCGC       180
     TTCGAAGGAA TGGTCGAAAG GATGATGGAG AAGATGTTCT CGCAAATGAC GCAGCTTGTT       240
     GCTTCCATCC TCAACGCAAA AGTATGCAAA GCCTAAAAAT AGTTATTTGG AATGCTAATG       300
     GCCTGCAGAG GAGCAGAGCC GAGGTGGAAC ACCTCCTAAA AACAGATGCC ATCGATGTAC       360
     TACTGGTATC AGAAACCCAC TTTTGTCCCA GATCCCATTT TAGCATTAGC GGCTACGATG       420
     TCATCCCTGC CAACCATCCA TCTGGCAGAG CGCGCGGAGG AGCAGCCATG CTCATCAGGA       480
     GTGGCATCCA GTACACGGAG CTACCTGCGT TTCAGGAGGA ATGGGCCCAG TGTGCCCTGG       540
     CCAGAATCTC CAGCCTACAT GGAGACATCA CCGTTGGAGC GGTCTACTTC CCACCTAGAC       600
     ACTCGATCAC CGAGACTCAC CTACAAGATT TTTTTGAGTC CTTTGGACCT CGCTTTATAG       660
     CAGCTGGTGA CTTCAACGCC AAACACTCCT GGTGGGGGTC CCGCTCCATC AACCCCAAAG       720
     GCAGAACGCT CCACAGATTC CTGCAGAGCA GAAGACTGGA TTGCCACTCC TCTGGTGAGC       780
     CTACCCACTG GCCTTCAAAC CCTTCCTTGC TGCCCGACCT CCTGGATTTT GCTATCTCCA       840
     AAGGCATAGG GCAAGACAGA CTAACTTGCT CCAACTATAA CAAGCTGATA TCCGACCACA       900
     GCGCTATAAA AATGCTTCTC AACATCCCCG TCCTCAAAAA AGAGTTGCCC AGAAGACTCA       960
     CCGGGAAGCA CACTGATGCC TCCAAGTTCA CACTCTGGAT GCTGTCCTCC CTGCACCCGG      1020
     ATCCTCCACT CTCCACTCCA AGCAACATCG ATGCGGCAAT CAAAACTCTC ACGGATGAGA      1080
     TGTACAATGC TGCCGAGTTT GCCAATCCTC CTCCTTCAAC GTCCCCAAGA ACTCCCGGTA      1140
     GAGACCTTCA CCTCTGGTCT CCAGAAATTG CGGCCTTCGT AGCGGAAAAA AGGCGCCTCA      1200
     GGAGAATCTG GTTCTTCTCG CGCAACCCAA GGGACAAGGC AGCACTCAAC AGAGCCATCA      1260
     AGGAACTCAA GGACAAGCTG TGTACCCTAC GGCAAGACTC CTTCGACAGA TTCCTTGAGG      1320
     AGCTGGAACC TGGTGACCCG CAACATAATC TGTGGCAAGT CACGCGTCAT ATCAGGAGGC      1380
     CTGCAAAGAA GGCGTCGCCG GTGCGCAAAG CGGACGGCTC TTGGTGCCGC TCTGAAGCCG      1440
     AAAGAGCTGA AGCGTTTGCA GATCTCCAGA ATGCATTCAC ACCATTTGAC AGATGCACTG      1500
     GCGAAGAGCG TGCTGCAACC ACCAGGTTCC TAGAGAGTCC ATGTCCTCCT AGCCTGCCCA      1560
     TAGAGCCCGT CACCCCAGAA GAGGTTGCGC AAGAGATCGC CTCCCTAAAG GCTAGCAAAT      1620
     CCCCAGGACT GGATCGCATC GACGCCACAT CCCTTAAAAT GCTGCCACCT CCCTGTTCCC      1680
     AGTTGTTGGC CAACATATAC AACAGATGCT TCTCACTAGG GTACTTCCCG AGATCATGGA      1740
     AACGTGCAGA AGTCATTCTC ATCCTCAAAC CTGGAAAACC TGAAGCCAAT CTTGCCTCAT      1800
     ATAGACCGAT TAGTCTGCTG ACAATCCTCT CCAAAATACT CGAAAGAGTA TTTCTGCGCA      1860
     GAGTCATGCC AGTACTGGAC GAGGCTGGAC TGATCCCTGA TCACCAGTTT GGCTTCAGGC      1920
     GATCCCACGG AACACCCGAG CAATGCCACC GGCTCGTAGC ACGCATCCTA GATGCATTCG      1980
     AGAACAAACG ATACTGTTCG GCCGTATTCC TGGATGTCAA GCAGGCGTTC GACAGAGTGT      2040
     GGCATCCTGG ACTCCTCTAC AAACTCAAGT CCCACCTTCC CAGTTCCCAC TATGCCCTAC      2100
     TCAAATCGTA TACTGAAGGA AGAGAGTTCC AAGTGCGATG CGGTTCCTCA ACAAGCACGA      2160
     CAAGGCCTAT ACGAGCCGGA GTACCTCAAG GCAGCGTCCT TGGTCCCATC CTCTACACCC      2220
     TGTTTACAGC AGACCTCCCT ATCATACCCT CCCGTTACCT CACAGCAGCC ACCTATGCAG      2280
     ATGACACGGC GTTCCTTGCC ACCGCAACAA ACCCTCAATT AGCATCAGCC ATCATCCAGA      2340
     GGCAACTGGA TGCACTGGAT CCATGGCTGA AACGCTGGAA CATCATGATC AACGCTGATA      2400
     AATCCTCCCA CACCACCTTC TCTCTGCGCA GAGGAGAATG CCCCCCGGTC TCACTCGACG      2460
     GCGACACAAT CCCTACCTCC AGCACCCCCA AATATTTAGG GCTGACCCTA GACAGAAGGC      2520
     TGACTTGGGG CCCCCACATC AACAATAAGC GTATCCAGGC CAACATACGC CTAAAGCAAC      2580
     TCCACTGGCT CATCGGTAAA AAGTCCAAGC TGCGAGAGAA ACTAAAGATT CTCGTCTACA      2640
     AGACTATTCT CAAGCCAATC TGGACGTACG GAATTCAGCT GTGGGGCACT GCTTGCACAT      2700
     CACATAGAAG GAAGATCCAG CGATTTCAAA ACAGATGTTT GAGAATAGTC TCCAACGCCC      2760
     ATCCCTACCA CGAAAATTCC GCCATCCACG AGGAGCTCGG GATTCCATGG GTAGACGACG      2820
     AAATCTACAG ACACAGCGTG AGATATGCTA GCAGACTGGA GAACCACCAC AACCACCTGG      2880
     CCGTCAACCT TCTAGACCAC AGCCAATCCC TAAGACGCCT GCAGAGAACG CACCCGCTTG      2940
     ACCTTACTCA ACATACTTAA TCATACTTAA CCCCTACCCA AGTACACTCG ATGTACTCCC      3000
     CTTAAGTTAA TGTTTCCCTC CAAAAAATTT AATTATTGTC CACTAGGACA GATTTTAAAT      3060
     AATAAATAAA AGGCTACAAA AAAAAAAAAA AAAAAAAAAA AA                         3102
//
ID   DMCR1A    standard; DNA; INV; 4470 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063594; Cr1a.
XX
FT   source          nnnnnnnn:1..4470
FT   SO_feature      CDS ; SO:0000316:435..1466
FT   SO_feature      CDS ; SO:0000316:1622..4294
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 4470 BP; 1225 A; 982 C; 828 G; 1435 T; 0 other;
     TTGGCTTTCA AAGCGAACGG TCGTTTTTTT TTGCGCCCCG ATTTTTATTT TGTGTTTGCC        60
     AAACCAGCCG TGGTTTTTAA TAATCTTCTT TAATTATCAT ATATTTTAAA CATAATTATT       120
     AAAGATCCGT TCGCTTCGCG AGTGATTCTT TGTGATTTGT GCAGTAGTTT AAACAAATAT       180
     ACAAAGTATT TTGCATTTTT CGTCTTTGTG TTTTGTTTAC TCTCCCTTTT GTGCGTTGTT       240
     CGCAGTGCTG TTTGGTGTTG TTTTTTGCAT GCACATAAAC TGCACTTTTC GCTCTCACTC       300
     TCTCGCTCTT TCGCTCTCCC ACACAAAATC TAAATTTCTC AGCGTGCAGA CTGCTCTCGT       360
     GCGGTTCTTT TAACAGCTCG CTTGAAAGTT TTGATCTTGT GTTTTCGTGC ACAGTGGTCT       420
     GATTTTAGAT AAACATGGAA ACCGTAAATG TTGTCTGCTT TTATAAAAAT TGTTGCCAGG       480
     TTATAAAACC TGAGCAGCCA AAAATGACTT GTTGGCTATG TGATAGAATG GTGCATACTA       540
     AGTGCGCTGG TTTTAATGGC CGTACAAGTG ATGACCTAGC AAAGGGTAAA AATCTAAATT       600
     ACTGTTGTGA TGCTTGCCTT GTGGTTGCGA ACGAGATGAA ATCGTTTATG CGCCAAACTA       660
     AAGGTGGCTT GAAAGAACTG ATCAACAGTT TTGGCGTAGC TAGAGATAGT TTTCGTCGAG       720
     CCGATGATCT TCTTTCCGCG CTTAATTCAC AGTTTAATGG CCTTAAGCTA TTAGATGAAT       780
     CTCCAAAGCG CAAAAAAGCC GCTGGTGGTA GGCTGCCTAA GGCCCCGCAA CCACGGGCAA       840
     ATGATCAACA GGACTCCACA ACTGATCAGC TGTCAATCGC AGCAAATCCG CATATGTTGC       900
     TAAGATCGGC AGCTAAAAAA GATTCGGAGC AATCCGATCA ATCCGCTGTG GAGGGAGCCC       960
     ACCCTGTGAT TGCTAAAGAT TCCGAATTGT CTGCACTGGT TTCTCAACCA GTGATTCCAC      1020
     CTGTCTCGAT TAGTTTACCA CCACAAGGGA ACATTGAGTC CGGACTACCG GCACAAGTTG      1080
     GCACTTCAGA AATACAATCT GCAGGGCCAA AACCCCTCGC GGTGGTTCCA CTAAAGAAAC      1140
     AAATTTTCGT TTCTCGGCTT TCCCCTGATC AAACATCGTC TGATGTATTG TCTTATATAC      1200
     AAGACAAAAC AAAAGCCGAT AATATAAAAG TGGAAAAATT TAACTTCTCT TACGCTAGGG      1260
     ACATATCATC TTTCAAGATA ACTGTCCCAA ACGAGCTTTT TTCGACCATA TGTTCGGGTG      1320
     ATTTTTGGCC GGATAGTATG GTGGTAAAAG AGTTCGAAGC TAAGATCAAA AATAGGAAAA      1380
     AGGGGCCCGT GGGAATTAAA CTTCCCTCAC GTGGCCAGAC CACTGCACCA TCCGCCTCTT      1440
     CATCTTCTTC CTCTTCAAAA AACTAACAAC GAATCTTACT ATCTCCTATC AAAATGTTAG      1500
     AGGCTTGCGT AGCAAATTAA CCAAATTGTA TTGTGATAGT CTTTCATTTG CATCCCATAT      1560
     AATAGTGTTC ACAGAGACTT GGTTAAAGCC GGAGATACTT AACTCCGAAG TCTTCCCAGG      1620
     TATGTACACT ATATATAGGT ATGACCGTCC CTCCAGACGG GGAGGTGGAG TCTTAATTGC      1680
     GGTTAGATCT ACCCTCGCGT CGGAGGAGTT ACTTTTGGAC GAATCCCGTA ACTCGGAATT      1740
     CTTATGCGTA AAGCTGTCTT TTTCCGACAG ATCAGTTTAT ATTACGTGCT CGTATATTCC      1800
     GCCATCTTCT GAATTCCCAG AATATCAGAA TCATCTGTCC GCTATCCAGT CCATCTTGAA      1860
     TAAACTGTCT GACAGGGACC AATTGGTAGT TCTAGGTGAT TTTAATATAC CTGGCACAAT      1920
     GTGGTCCCCA GAAAAACAAT CGAATATCCT TCTCCCTTTA GCACAACATG ACTTTATTGA      1980
     CGGCTTGCTC GACTTATCGT TGTCGCAAGT TAATTATATT CCAAACTCTC TTGGTCGACT      2040
     GTTGGATCTA TGTTTTGTAA CAAGTCCTGA AAGTGTGTTT CTGTCCAGGG TAGCACCTCT      2100
     TACTCAACCT GAAGATCCAT ATCATCCTAC TTTCGAGGTG GCAATCGACA TAGGTACGGT      2160
     ATTAAAAGTA AATTCAGAGA AGTCAACAAA GCGAATTCCC TGTTTTCGCA AGGCAAATTT      2220
     TCGGAGGCTA AACAATTTTA TAGCTGGCTT TAATTGGTCC GATCTTTACT CCTGCAACAT      2280
     AATGGCGGAT GCGATTAATA TGTTTTATAC CGCAATTAAA TCATTTTTTG ACTCTTGTGT      2340
     TCCGATGTAC TATCCGTCAA TCTCTAAACC TCCTTGGTTT AATAAAGAGT TGACACACCT      2400
     AAGAAATGTA AAGTCCAGAC TCTATATAAA ATTTAAAAAT ACCGGTTCTC AGTCCATCCT      2460
     TTGTAAATAT TTAAGCGCTC GGTTAAACTT TACCGTGCTT AATGCTCAGT GCTACAAGAA      2520
     TTATTTAAAC CGTTGTAAGT TCCAGTTTGC ACAGGATCCG AAACAGTTTT ATAATTTCGT      2580
     TAGCACTAAG CGAAAAACAA GTTCTTACCC TTCCTCGCTA TTTTTTGAAA ACACTACGGT      2640
     AACATCGGAT CAGGCAATAG CCGATCTATT CGCCAAGTTT TTTCAAACAA CATATTCAAC      2700
     TTTACCTCAT TCCGAACAGC CATACTCTTA TGCGGTATCT AAGTCGAATC TAATATTTTG      2760
     CCCCACTATA AACGAAAGCT CACTGCTTAA CGATCTTCAG CGTGTTAAAC CGGTCTATTC      2820
     GCCAGGTCCC GATGGAATCC CTGGCTGTGT GCTCAGATTC TGTGCGGAAG CCTTGTGCAA      2880
     GCCTCTACTG AAACTGTTTA CCTTATCTCT GGAATCTTCA CAATTCCCTC ATATATGGAA      2940
     GGAGTCCTTT GTGATTCCTC TTCATAAAAA AGGTAGCAAA CTGGATGCAA GCAATTACAG      3000
     AGGAATCTCT AAATTGTCGG CTATCCCAAA ACTTTTTGAA AATGTTATCA CTCCTCATTT      3060
     GCAGCACCTT TGTAGATCAA TCATATCACC GTGTCAACAC GGTTTTATGA AACGCAGATC      3120
     AACAACCACT AACCTCTTGG AGCTAACTTC TTTCGTAATA CAGGGTTTCA AAAATAATCT      3180
     TCAAACAGAT GTCATCTACA CTGATTTTAG TAAAGCATTT GACTCTGTTA ATCATTACCT      3240
     TCTAATAAGA AAACTTGATC TTTTAGGTTT CCCTGTTGAT CTTCTAAATT GGATTTCAAG      3300
     CTATCTGAAT GGCAGGACAC AACAAGTCCT CTTTAAAAAT TCTTTATCTT GTATTCTCCG      3360
     AGTCACATCC GGTGTCCCAC AAGGGAGCCA TCTTGGTCCG CTTCTTTTTA CCTTATTCAT      3420
     TAACGACCTC CCCTTAATAA TAAAACATTC GCGTGTACTT ATGTACGCAG ACGATGTTAA      3480
     ATTATGCCTC CAGCACAAGG ACACTTCGTG CCATTTGGAC TTACAATCCG ATCTAGACCG      3540
     ATTTCAAATA TGGTGCCGTG ATAACGTATT AGACTTAAAT GGCTCCAAGT GTAAAGTTAT      3600
     GACCTTTTGT CGTGCCAACC CAATACGCAC GACTTACACT CTAAGTGGGT GCTCTTTGGA      3660
     CAGAATAACA CGAGTTGATG ATCTTGGTGT TCTTCTGGAC CCTAAACTAA AATTTTCTGA      3720
     CCATATTTCG TCTATTGTCA ATAAGGCCAG GGGTGTGCTT GGTTTTATAA AAAGGTGGTC      3780
     TAAGGAATTT GATGATCCTT ACTTGACTAA AACCTTATTT ATTTCGTTAG TCCGTCCGAT      3840
     TCTCGAGTAC GGATCACCTG TTTGGAGTCC ACAATACGCA GTCCACTCGG ACCGCATTGA      3900
     ATCGGTCCAA AAAAACTTCT TACTTTTTGC CTTGCGGCGC CTAAATTGGG ATGCAAACCG      3960
     TATATTACCT CCTTATTCCA GTAGACTACT TTTAATTAAT TTACCGTCCC TAGCTAACCG      4020
     TAGAACTATG CTTGGAACAG TCTTTATTTG TAAGCTTATT CGTGGGGATG TTGAGAGTCC      4080
     CGACTTGATT AGTCGGCTTA ACTTCTCGGT TCCAAGTAGA TTCACTAGAA ACTATATACC      4140
     CCTTATCTTA AATCATTGTA GATCTAACTA TGAGTTGCAT GACCCTTACA GAGTTTTATG      4200
     TTCTGACTAT AATAGACTTT ATCCTATTAT CTGTAATCTT GACTCTCTGC CGCTCTTAAA      4260
     GCAATCGATT TTAACTTTTT TATTACATAA TTAGATCCTA CTAACACTAA TATTTAATAT      4320
     AGTTATTTTA CATTATATTC ATTTCCTCGT TCCTGTTCTC TTTTTTATAT CGCGTCTATA      4380
     TCTTCTCGCG AATCGAGCCG TACGATACAC GGCAGCGCCC CTCGGTCGGT TGGGCGGGAG      4440
     GTGTGGCCGT GGGACCCGTG CGAAAAAAAA                                       4470
//
ID   TC1    standard; DNA; INV; 1666 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0026410; Tc1.
XX
SY   synonym: Mercurio
XX
FT   source          nnnnnnnn:1..1666
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..26
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1640..1666
FT   SO_feature      CDS ; SO:0000316:359..1354
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 1666 BP; 535 A; 288 C; 369 G; 474 T; 0 other;
     TACAGCTGCG GTTAAAATAA TAGCACTACT GCAGGTGGAA AGTTGATTTC CTAAAAAAAA        60
     ATTATTAAAT GTTTATATTT TTTAAAGTCA GATTGCATGA ATAATAAGTA CCATATGTTG       120
     GCTCTCTGAG CAAGAAATTT TTACTCTCTC AATGTAACGG TTCTTTTTGT TTTTGGGCAC       180
     TTGCTGCAAA AGTGCGCGAA ATGAGGCGGT AACAAAAATA GCACTGACCA CGTATTTGCT       240
     GAATAAAATT AATAGGAGTG ATTGCTTTGG GTTTTTTTTC GACAAATTTT GAAAAAAGGA       300
     GTTGTATTAA AGGTTTTAAT TGAATTTTTT CCAAACGAAG ACCAAAAATT CTCTAGTTAT       360
     GGGTCGCGGA AAGCATTGTA CCGTCGAAAA AAGAAATTTG ATTAAAAACA TGATCTCTGA       420
     AGGTAAAACC TACGCTGAAA TTGGTCGCAT TGTCGGTTGT TCAAACAAAA TGATCCGCAA       480
     AGCACTGCTG TTTGTCGAAA AGAACGAAAC ACGGCGAAGA AAGCCCTCAA TGTCCAACGT       540
     GGAGATCAAG CGCTTGGTTC GGCAAGGCAA GAAGGAGCCT TTTAAGCCGG CGACGGAACT       600
     GAAGAAGGAG CTTCAGATAG CTGAAAGCGT GGAAACTGTT CGCAAACGCT TAAGACAAAA       660
     CAACCTTAAT GCGTGCAGCC CAAGAAAAGT CCCGCTTTTG ACTGTTAAGC ATGTGGCAAA       720
     GCGAATCGAA TATGCCAAGA TACACAAGGA CTGGCCTGTG GAGAAGTGGC GCAACATTTT       780
     GTGGTCAGAT GAGAGCAAAA TTGTGTTGTT TGGTGGGAAA GGCTCTCGGT CTTATGTTCG       840
     GCGTCCACCA CGAACTGAAT ATAATCCTCG CTTCACCTTT AAGGCGGTAA AGCACGGGGG       900
     ATCAAACATC ATGGTATGGG CGTGCTTTTC ATACTATGGA GTAGGTCCGA TCCATTGGAT       960
     TCAAGGCATC ATGGATCAGC ACATTTACAC AGATATCCTG GAAAATGTGA TGCTGCCATA      1020
     TGCCGAGGAT GAAATGCCGT TGGTTTGGAC ATTTCAACAG GATAACGACC CAAAACACAC      1080
     GAGCAAGAAA GCTCGAAAGT GGTTTGAGCA GAAATCGATC CGAGTAATGA AATGGCCTGC      1140
     TCAGTCACCC GACTTGAATC CAATCGAAAA CCTTTGGGCG GACGTGAAAA AAAAGGTTTC      1200
     TGAAGCCAAA CCCAATAATA ACGAGGATCT TTGGGGTGTG GTCAAGGATT CATGGAGCAA      1260
     AATTCCTCAA AAACGGTGCC AGGACTTGGT GGACTCCATG CCAAGACGAT GCGCAGCTGT      1320
     CATTGCCAAC AAAGGTCACG CAACCAAATA TTAAGATTCT TTAAACATAG TTCTTAAGAT      1380
     ATAATCCATT TGTTGAATTA TTTTTTTATT TTTTTGGTTA GTTTTAGCAA ACTACGAGAA      1440
     ACAGTGCTAT TTTTGTTACC GCCTAAATTT GAAGGTTTTT TTTTTTGTTT TACCAATTAT      1500
     TTTTAAAATA TCCATTAGAT CTGTTACTAA TTTTTTTATT TCGATTGAAA ATCATTGTAG      1560
     TATTTAAGTT TAGTGAGTAA AATGATGAAA AAGTGTCAGA AAATAGAGAA ACGCTGGGAC      1620
     AAACACGAAA TGTGCTTATG GTGCTATTAT TGTTACCGCA ACTGTA                     1666
//
ID   DOC2    standard; DNA; INV; 4789 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063534; Doc2-element.
XX
FT   source          nnnnnnnn:1..4789
FT   SO_feature      CDS ; SO:0000316:1315..1989
FT   SO_feature      CDS ; SO:0000316:2023..4674
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 4789 BP; 1666 A; 1225 C; 873 G; 1025 T; 0 other;
     AACGCTCGGT CGCTGACGTG TGAAGACGTG TTTTCATCGA GCTCCGTATA AAATCGGTTG        60
     TTTTTAGTGA AGTGAATGGT TATTAATATA ATACAAACAA ATAAATCGAA AGCGAAAGAG       120
     ACGCTCTGTG CGATGCACCA TCGCTCGAAT ACCTATTCTG TGTAGTATAT AAGTATACTA       180
     AGTTATAAAT AGTATAAGCA AGTAGTTTTA CACCTTCAAA AGAAAAAGAA AAAAAAAAAA       240
     AAGGAAAAAG AAAAAAAAAA AGGAAAATAA AAAAAGACAC TATGATCCGG AACGACACTC       300
     GCGTTCAGCG ACAACGCGAG CAAGACGATC GCCGGCTCTC ATTGCAACGA AACAACGCGT       360
     ACTTCTCTTA CGTCTCCGCC ACTTCTGCAG ACAGCGAGCG GTCAATCACC CATAACCCGA       420
     CAAGTTTACC ATTGCCAACA ACTCAAGAAA GAGCGCGTTC TTGCTCTCCC TCACTACTGT       480
     CACAAAACCC CCAATTTCCA AACACTTGCG AAATTTCTTT ACGCTTACCT ACGGTGACTA       540
     GTACTGTGAC AACAACAACC ACTGCAACTG CAATCACAAC AACAACTGGA ACGGTATCGT       600
     CAGCTCGCTC AATTATGTCG ACGCAAGCAT TTGCTCCTAC TAAGCCAGCG ATCAAAACAA       660
     AAACACAATT TAACGGTTCT GCTGCGCTAT CAGCAAGCCA AAACGTAAAC AAGAACGCCG       720
     GGTCCACCAT ACAGACTGGA ATGGATCGCT ACATAACAAT AAAAAGAAAA CTTAGCCCTC       780
     AAAATTACAA AAGCCAACAA ACAGAAAACA AATCAAATAT TACACCGCGA CAATGCTAAC       840
     ATGCTCACTA ACAAAACGCC AGAAAACACC AATAGATTTG AGATTTTGAC CGGCAAAGTC       900
     ACCTAAGAAG GTCAAGCCTC CTCCAATATA CATTCGCGAA AAAAGCTCAA GTGCATTAGT       960
     GAACAAAATA GCCACACTTA TAGGAGAAAA CTCATTTTAC GTAATACCCT TAAGAAAAGG      1020
     GAACATAAAT GAAACAAAGG TTCAAACTGA AACCGAGGAT AACCATCGTA TACCAACCAA      1080
     ATTCTTGGAT GAAGCAGGAA AAAACTTTTA TACATACTAA CTAAAAAGCG CAAGGGGCCT      1140
     ACAGGTTGTT CTCAAAGGGA TTGAGGCAAC TGTTTCGACC ACTGAAATCG TAGAAGCGCT      1200
     CAAGGAAAAG AACTTTAGTG CAAAAATGGT CATGAACATA TTAAACAAAA ATAAGGAACC      1260
     ACAACCAATG TTCAAAATCG AGTTGGAGCC AGAGCGCCAG ACACTGAAAA AAAAATGAAG      1320
     TTCATCCAAT CTACAAGTTA CAGCTCCTAC TGCATTCGGC GTATCACAGT GGAAGAGCCA      1380
     CACAAGCGCA ATCGCCCAGT GCAGTGCACT AACTGCCAAG AATATGGCCA CACTAAGGCG      1440
     TACTGTACGC TGAAATCTAT TTTGCGTAGT CTGTAGTGAA GCTCATAGCA CAGCGAACTG      1500
     CCATAAGAAC AAGGAAGACA TCTCTGTTAA AATGTGCAGC AACTGCGGTG AAAGTCACAC      1560
     AGCGAACTGG CGTGGCTGTG TAGTATACAA GGAACTAAAG AACCGCCTTA ACAAACGCGG      1620
     AGAATCAATA CGCGCTCAGA CCACCCACAT CGCTCACACT CCGCCACAAT CGGGCCCGTC      1680
     CTACACTGCA CCCCCCCCCC CCCCCCTACA CATCGTACCA GTCCTAGCGT CTCCTTCGCT      1740
     AGTGCCTTAA AATCGGGAAT TAAATCTGTG AATCCGCTAA CACAAAAGTC GACTTCTACT      1800
     CGGGAAGAAC AGAAAATAAC TACCTTGAAC GAACAAACGC AGCATATATC AACTGGCATT      1860
     GAAACGATGA TGATCTCACT CCAGCAAACC CTAAAAGAGT TTATGACATT CATGCAAACC      1920
     ACAATGCAAG AGCTTATGCG AAACCAAAAC ATGCTGATAC AGCTTCTTCT GTCATCCAAA      1980
     TCAATATAAT GTCTCCACTT CAAATATCTA TGTGGAACGC GAATGGCGTT TCACGGGCAT      2040
     AAAAACGAAC TTGCCCAGTT CTTATTCGAA AAAAATATTG ACGTCATGCT CCTCTCCGAG      2100
     ACACATCTAA CAGACAAGCA CAACTTCCAT ATCCCAGGAT ACTTATTCTA CGCCACAAAC      2160
     CATCCGGACG GCAAAGCCCA TGGGGGCACT GGTATACTTA TCAGAAGTCG CATCAAACAC      2220
     CACCTTTATA ACAGAACTGA AATGGACTAC CTGCAATCCA CTTCCATAAG CATGCAATCC      2280
     AGCAGCGGCC CCGTCACTCT GGCCGCAGTC TACTGCCCAC CTCGTTTTGT AGTTTCTGAG      2340
     GACCAATTCT CGGAATTTTT CAACTCACTC GGTGAGCGAT TCATAGCGGC CGGTGACTAC      2400
     AATGCCAAGC ATACGCACTT GGGGATCACG TCTTTTGACC CCAAAGGGCA AACAACTTTA      2460
     CAACGCGCTC ATTAAGCCGC GAAACAAGCT CGATCATGTG ACTCCGGGTA GGCCTACATA      2520
     CTGGCCAGCA GATCCAAATA AGCTACCGGA TCTCATTGAC TTCGCAATAA CAAGAAAGAT      2580
     TCCAAGAAAT AATATTACGG CCGAGTCACT TGCAGAACTA TCATCTGATC ACTCTCCAGT      2640
     TCTACTTACT CTCTGGCACC GACCACATAT AACTGAGCGG CCCTACAGGC TGACAGGCAA      2700
     CAGGACCAAC TGGCAAGGTA CGCGAAATAT GTTTGTACTC ACATGGAACC AACTCAAACA      2760
     GTATTCACCG ACGAGGATGT TGATCGCCTG GTCAAATCGA TAGAGGAAAC ACTTGTTGCT      2820
     GCAGCCAAGG CCTCTACACC TCCAGACACA CACAAAATGA CAAATCATAG CAAGACAAAT      2880
     CGTGAAATCG AACAGCTAGT ACTTGAAAAA CGAAGACTAA GAAGAGAATG GCAGAATCAT      2940
     AGATCCCCAA CGGCTAAAGA ACATCTAAAA ATAGCAACAC GTAAACTAAC CAGGGCACTT      3000
     AAGCTTGAGG AAGCCAACGC CCAGCATCTA TATATCAAAC AACTATCGCC CACCAGCAAA      3060
     AGGAACCCTT TGTGGAAAGC ACACAAAAGC ATACAGCCAC CGGCAGAAAC AGTCGTTCCA      3120
     CTGCGAGGTC CCTCTGGAAG CTGGATACGC AGCGACGAAG ATAGAGCTAA TGCGTTCGCC      3180
     GATCACCTTC AGAAAGTATT CCAACCAAAT CCTGCTAGCA ACTCATTTGT CCTCCCTGTA      3240
     GTAACTAAAA GCTTGCCCCC TATAAATCCA GTAACATTCA GCCAAAGTGA GATAGCATCT      3300
     ATCATAAAAG ATCTTAAGCC CAAAAAATCA CCTGGACATG ACTTGGTGAC ACCAAAAATG      3360
     ATCATAGAAC TCCCACCGTG TGCGGTTCTG ACCTTATGCC ATCTCTTCAA CGCTATTACG      3420
     AAACTTGGAT ACTATCCCCA AAGGTGGAAA AAGGCGGTTA TAGTAATGAT TCCCAAGCCA      3480
     GGCAAAGACA AAACGCAACC CTCATCCTAC AGACCAATCA GTCTCCTAAC GTGTCTCTCG      3540
     AAACTGTTTG AAAAGGCATT TTTAAAACAA CTAACTCCCT ACTTAAAAAG GCGAAATACA      3600
     ATACCATCGC ATCAGTTTGG CTTTCGCAAA AATCACGGAA CGATCGAACA GGTCAATCGC      3660
     ATCACAAACG AAATTCGTAC CGCTTTTGAG CACCGGGAAT ACTGTTCAGC TATATTCTTA      3720
     GATGTTGCAC AAGCATTTGA CCGAGTCTGG CTGGAAGGAC TAATGTACAA GATAACAAAA      3780
     CTGCTTCCCC AGAACACGCA CAAAGTGTTC GAATCTTATC TCTTCAAAAG AGTGTTCTCA      3840
     ACCAGGTGTA ACAGTTCGAC TTCACACGAC CGCGTTATCA ATGCTGGAGT CCCCCAAGGT      3900
     AGTGTACTGG GCCCCGTTCT TTACACCCTA TTCACAGCAG ACATGCCTAC AAACTATCAG      3960
     CTCACAACCT CTACGTTTGC TGACGATACC GCAATACTTA GCCGATCTAG ATGCCCAGCA      4020
     AAGGCAACAG AGCAACTTGC CTGCCATCTT AAAATAGTGG AAAGATGGTT TGCGGACTGG      4080
     CGCATTAAGA TAAACGAGAC CAAAAGCAGA CATGTAACCT TCACACTGAA CAGACAAACC      4140
     TGCCCACCCT GTACCCTGAA CAATACATTT ATCCCACAAG CAGACGTAGT AACATATCTC      4200
     GGCGTTCACC TAGATAGACG CCTCACCTGG CGGCGACATA TAGAATCTAA GAGGACTCAT      4260
     ATGAAGCTTA AAGCAGCCAA TCTTCGCTGG TTTATTAATT ACAACTCTCC CCTTAGTCTG      4320
     GAATACAAAG TACTCCTCTA CAATACCGTG CTGAAACCCC TCTGGACATA CGGCTGTGAA      4380
     CTATGGGGAA ACGCTTCAAA AACCAACATT GAAATCATAC AGCGAGCTCA GTCCACGATT      4440
     CTGCGAACTA TCACTGGGGC ACCATGGTAC CTACGCAGCG AAAGCATCCA TAGAGACCTC      4500
     CACATAAATC TTGTCAATGA GGAAATTCAG ATGAAAAAAA GTAAACATCA AGCAAAGCTC      4560
     GCCGCACACG AAAATCCTCT CGCGAAGTCG CTTACGCGAG TCTACAGTCA GAGCCGACTG      4620
     AAGCGCAAAG ATTCTCCAGC CCAGCAAAGA AATCCTAGGG CCGTCTCTAA CTAATACAAT      4680
     TACTTCATAT TGTAATTAAT ATAAGTTATA TAATAAGATT TGAATAATTA TTGTTAGTCT      4740
     CACAAAAAGA GAAGATCCAA TAAATAACGC AATAAGTTAA AAAAAAAAA                  4789
//
ID   DOC3    standard; DNA; INV; 4740 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063533; Doc3-element.
XX
FT   source          nnnnnnnn:1..4740
FT   SO_feature      CDS ; SO:0000316:221..1939
FT   SO_feature      CDS ; SO:0000316:1939..4608
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 4740 BP; 1639 A; 1175 C; 906 G; 1020 T; 0 other;
     TGGCATTTCA AGTGAACAGA CGTGTTTTCA TCGAGCTCCG TATAAAATCA CTTGATTTTA        60
     GTGAAGTAAA TAGTTAATAA CATAAAATAA ATAAATAAAT CGAAAGCGAA AGAGACGCTA       120
     TTGGCAATGT TAAATTGCTA TACTACAAAA TTTTCTGTGT GTGGAATAAT AAAGTAAAAC       180
     TAAAAAACAA ATAGACAACG AACGAATCGA TCGTTCTAAA ATGAGCCAAC GCGAATTGCG       240
     CGCTCAGCGG CAAAAAGAGC AAGACGAGCG CCGACTCTCT TCGCAGCGGA ACAATGCATA       300
     CTTCACCGTC GTGTCTGACG CCCGCGAGTG CCAAATCATC CACCCGGTCA ATGACCTAGC       360
     ACCTGCAGAA TGCAAACGAT CGCGGTCTTG CTCACCAATG CTTATGACTG CACGAAATGA       420
     ACCCGAACGC ACTGAGAGCG TCTCTCTCAA GCTCTCCCCA TTCCAAACGG TGTCAAGTTC       480
     TTTAGCTACC AGTACAGCAA TCACGATATC TACTGCAACT GCACCTTTAG CAACAACAAC       540
     TGCAACAACA ACTGCAACAG CATCAACATC AACTCTATGC TCAATACCGA CAGCGGTGTA       600
     CAATTCCGCT GTACCAACAA CAACGAAAGC AAGAGCACTC ACACCGACTC TTGAAAGCGG       660
     AAGCGGACAA GAACCAAAAC AAAACAAAAA ACTTTGTCAA ACAGGGCTGG ATCGCTACAT       720
     CCAAATAAAG CGAAAGCGAA GCCCACAACA CAAGCAGGCT GGTAATCAGC CGAAAATAAA       780
     TCGCGCCAAC GCCTCCAATG ACTCAAGTTC AAATAGGTTT GCACTATTGG ATGACTGCGA       840
     AGTGCAGGAG CAGGAGCAGA AGAAGATAAA GCCGCCACCA ATATATATAC GTGAGAAAAC       900
     CTCAAGTGCG CTGGTTAACA AACTAGCTGC AATTATCGGA GAAAACAAGT TCCATGTTAT       960
     ACCTCTTACT AAGGGCAACA TACAAGAAAC GAAAGTGCAG ACTCAGGATG AGTCTAGCCA      1020
     CCGATCAGTG ACCAAGTACC TGGACGAAGC TGGGAAGAGT TACTATACCT ACCAGCTGAA      1080
     AAGTGCCAAA GGATTGCAGG TTGTCATTAA AGGAATAGAG TCATCAGTGA CCTCATCCGA      1140
     AATTATCGCG GCACTAAAGG AGAAGAACTT CAACGCCAAA ACGGTGATCA ACATTCTCAA      1200
     CAGGAACAAA GAGCCGCAGC CACTCTTTAA AGTCGAACTG GAGCCATCGA GTCAGAAAAA      1260
     CAACAAAAAT GAAGTACATC CTATATATAA GCTACAGTAT TTACTGCACC GAAGGATAAC      1320
     CGTAGAAGAG CCACACAAGC GCAGGCAACC TGTGCAGTGC ACCAACTGCC AAGAATATGG      1380
     ACACACCAAA GCGTACTGCA CCCTAAAATC CATCTGCGTC GTTTGCAGCG ATGCCCACAG      1440
     TACTGTAAAC TGTCCTAAGA ATAAAAACGA CAGTTCAATT AAGTTATGCA CCAACTGTGG      1500
     CGAAAAACAC ACAGCCAACT GGCGAGGATG CATTGTTTAC AAGGAACTCA AGAGTCGCCT      1560
     AAACAAACGA GTGGATTCAG CTCGAGATCG TATCACACCA ACAATTCTCA AAGCAATGGA      1620
     ACCGACTACG ACTAACATCC CTTCGTCTGC CAGCCACCGA ACAATGCCAA ATTCTTCCTT      1680
     TGCAAGTGTA CTAAAATCAG GGATCCAAGC ACCAACAGCA GTCACCTCCA GCGTCCAGCA      1740
     TAAAACTCAC CAAATAAACA CAAATAAACA AATAAACACA CAGAACATGC AACAGCAGCC      1800
     AATTGGCGTT GAAGCGATTA TGCTTTCGAT GCAGCAAAGT ATGAAAGACT TCATGACCTT      1860
     CATGCAAGAA ACTATGCAAG AGCTTATGAG GAACCAAAAC ATCCTTATTC AAATGCTCGT      1920
     TTCTTCCAAA ATAGGATAAT GACTCCCTTA ACAATAGCTA CCTGGAACGC TAATGGCGTT      1980
     TCGCGGCACA AGCTAGAACT TGCTCAGTTC TTAGCCGACA GAAACATTGA CGTTATGCTA      2040
     CTCTCAGAGA CTCACCTTAC CGAAAAGTAC AACTTCCAAA TACCAGGATA TAAATTTTAC      2100
     TTTACGAATC ACCCGGATGG CAAGGCCCAT GGAGGCACTG GCATACTAAT ACGATTGCGA      2160
     ATTAAGCACC ACTTTCTTGG TAATTGGCAA GAAGACTGCT TACAATGTAC CTCTATAAAC      2220
     CTCCAATGCC ATAACGGTGC TCTCACTCTG GCTGCTGTCT ATTGCCCACC TCGCTTCACA      2280
     ATCTCTGAGA AAAAATTCAC AACACTTTTT GACTCGTTTG GTGAAAGGTT TGTTGCAGCT      2340
     GGCGATTGGA ATGCCAAGCA CATGTACTGG GGATCTCGGA TAGCGAACCC TAAAGGAAAA      2400
     CAGCTGTACA ACGCAATCAT CAAACCGCAA CACAAACTTA ACTATGTTTC CCCGGGAGCG      2460
     CCTACATACT GGCCAGCAGA TCCCATGAAG CTTCCAGATT TGATTGACTT TGCCATCACA      2520
     AAAAGGATAT CCCAATCAAT GATTACAGCT GAGGCACTTC CAGAACTCTC ATCTGATCAC      2580
     TGTCCGGTAA TCTTTCATCT TTTGCACCAA CTACAACACA TCGAGCGACC GTGTAGGCTT      2640
     ACAAGCAATA GGACCAACTG GGCGAGGTAC AAAAAATATG TTTGTTCCCA TACCGGCTTT      2700
     TCTAGCCCCC TGGAAACCGA GCAAGACATT GATCAGTTTG CTGGTGATAT AGAATCAATA      2760
     CTTGTCGCAG CAGCAAAAGC GTCAACTCCA CAAGACAACC ATGTATGCAG CACAAAGTTT      2820
     AACAAGACAA GTAGAGATAT TGAACTGCTT GTGCTTGAAA AACGACGACA TCGAAGGGAG      2880
     TGGCAGGAGC ACAGATCACC TGGCGCAAAG AGTAAATTAA AAGCAGCTTC TCGCAGACTT      2940
     ACCAAAGCGC TTAAGAAAGA AGAAGCGGAC GCACAACTAA GATACATCGA GAATCTCACG      3000
     CCCACAGGCA CAAAGAACTC GTTGTGGAAA GACCACAGGA ACCTACAGGC ACCAACAGAA      3060
     ACGGTTGTAC CTCTCCGTAA CTCTACCGGA AACTGGTCTC GCAGTGACAC GGACAGAGCA      3120
     AGAGTCTTCG CTGATCATCT TAAAAAAGTA TTTCAACCAA ATCCAGCCAC TAACTCATTT      3180
     ACTCTCCCGC CTTTAACTGC ATCTGACTTA GCACCACAAG ATCCTGTAGA ATTTCGGCCA      3240
     AGCGAGATAA CGAAAGTCAT TAAAGAGCAA CTGAAAACTG GAAAATCGCC TGGCTACGAC      3300
     TTAATAACCC CGAAAATGAT CATCGAGCTC CCAATGTGTG CAGTTCTGCG AATCTGCTTG      3360
     CTCTTCAACG CAATTACTAA AATTGGATAC TTCCCTCAAA AGTGGAAGAA ATCAATTATA      3420
     ATCATGATCC CTAAGCCTGG GAAAGACAAA ACACAGCCAT CATCATACAG GCCAATAAGC      3480
     TTACTTACTT GTCTATCCAA GTTATTTGAA AAAGTGCTGC TGCTACGCAT CAGCCCCCAC      3540
     CTCAAAACAC ACAACACACT CCCATCGCAC CAATTTGGGT TTCGGGCAAA ACATGGAGCC      3600
     ATTGAACAGG TTAACCGCAT CACAACAGAA ATTCGCACTG CCTTTGAACA CCGTGAATAC      3660
     TGCACAGCTC TCTTCTTAGA CGTTGCACAA GCATTCGATA GAGTATGGCT GGATGGACTT      3720
     ATGTTTAAAA TAATCAAACT GCTGCCTCAA AACATACATA AGCTTCTAAA GTCTTACCTA      3780
     TATAAAAGAG TGTTCGCGGT CAGATGCAGT TCAAGCACTT CAAGCGATTG TACTATAGAA      3840
     GCCGGAGTGC CTCAAGGAAG TGTTCTAGGC CCAATTCTAT ACACCCTATA CACGGCGGAC      3900
     ATCCCAACAA ACTACCAGCT AACGATATCC ACATTCGCTG ATGACACTGC AATACTAAGT      3960
     CGATCCAGAT GCCCAGTAAA AGCTACGATG CAACTAGCAC GCCATCTAAC TTGTGTAGAA      4020
     CATTGGCTTG CAAATTGGCG CATACGAGTA AACGAAGGAA AGTGCAAACA GGTAACATTT      4080
     ACCCTAAACA AACAAACCTG CCCGCCCTTG GTAATGAACC ACACGCGCAT CCCACAAGCC      4140
     GATAACGTAA CATACTTAGG TATTCATCTG GACAAGCGGC TCACCTGGCG GAAACACATA      4200
     GAGGCCAAGA CGACGCACCT CAGACTAAAA GCAAGGGATC TACACTGGCT TATAAACGTT      4260
     CGCTCTCCCC TAAGCTTGGA GTACAAAGTC CTCTTATATA ACTCCGTTTT AAAACCCATA      4320
     TGGACCTATG GCTCCGAGCT ATGGGGCAAC GCATCGAGAA GCAACATCGA CATAGTACAG      4380
     CGAGCACAGT CTAGGATTCT GAGAATCATT ACTGGAGCTC CATGGTATCT TCGGAACGAG      4440
     AATATACACA GAGACTTACA AATAAAACTT GTCATTGAGA CAATAGCAGA GAAGAAAGTA      4500
     AAATACAATG AAAAACTAGC CTCACATCCA AATCCTCTTG CAAGAAAACT TATTCGAGTA      4560
     TGCAGCCAAA GCCGACTGCA CCGGAACGAC CAACCAGCCC AGCGTTAAAT TTGTTAGGCC      4620
     ACACAGCACG AATCATTTCA TAAAATGATA TTTAGTTAGT TTAGAATAAG ATTTGAAAAC      4680
     TTATTGTTAG TCTCTTAAGT AAAAGGGAAG ATTCAATAAA TAAGCAAAAC ATGAAAAAAA      4740
//
ID   IVK   standard; DNA; INV; 5402 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0043055; Ivk.
XX
SY   synonym: You
XX
FT   source          nnnnnnnn:1..5402
FT   SO_feature      CDS ; SO:0000316:192..1511
FT   SO_feature      CDS ; SO:0000316:1607..5290
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 5402 BP; 1780 A; 1425 C; 827 G; 1370 T; 0 other;
     CAGTCACCGA CTATCTCTCT TCGAGTGCGG ACGTCTGTGT CTTTCCAATT GTGTGCGCTT        60
     TGCTTATCGC GTAATTACCA TCGCCCAGCT TATCGCCGTT ACATTGATCT TTATCATCTT       120
     ATCTTCTTGA TCTTCTTATC AACGCGTACG TGCAAATCCA AAAACATTCA ATATCCATAA       180
     ATTTATTAAC CATGGCCCCC GGGCCACTCA ATTTGGGGGA TAATCGCTTT GCCAGTCTCA       240
     GCGTTAGCCC CAAAGCTAAG AAAAAAAGAC CCTTTCAAAA ATTACAAGTT GATTTCCCAG       300
     ACCTCCCTGA AACGCAGTGC AAAAATCCGA GATATTTAGT GGTCTCATCA AAAAACTCTC       360
     CGAAAACCAT ATCCGACTAC AACTGCTTTG CTGTCCATAG AGCCCTTAAG TATATCAGCA       420
     AAGACATTAC ATCCATCTCT AATCTTCGCG ATGGTAACCT TCTCTTGCTG GTTAACTCCA       480
     GGGAAGTAAG TGACAAATTT ATCAAAGTGA CCTCTTTACC TGGCTTATGC GATATCGAGT       540
     GCAAGCTCCA CAACACTCTT AACTTTGTCA AAGGCACCAT TTACGCTCCC TGTCTTATTA       600
     ACATTCCAGA AAACGAAATT GTTGAGGAAC TAAAATCTCA AAATGTACAC AGCGTATTTA       660
     AATTCACCAA AATGATCGAC GGCACCCCCA AACCATTTGG AAAAATTCTC GTAACGTTTG       720
     ACCGTTTCAC TCTTCCCAGT AAACTAACGG TTTCCTGGCA CACAGTTAAG GTGTCAGAAT       780
     ATATACCCAA CCCGATGAGA TGTAAGTCTT GTCAATTATT GGGCCACACA TCAAAGCACT       840
     GCAAAAACCC ACCCGCCTGT GTATCATGCA ATCTCGCTCC CCACCTTCCC GTGCCATGCA       900
     CTCGCATTTT CTGTGCAAAC TGCACCGGCG AACACCCAGC CTCCTCACCC GAATGCCCAC       960
     AATACCAAAC ACAAAAACAA CTGCTCCACA TCAAAACAAG CAAAAAATGC AGTTTCCATG      1020
     AAGCTCGCAC TATACTAAAA CAACAACAAA ACACAACAAA TAACCCCACG CTTACCTACT      1080
     CGACCGTCGC AAACCAAAGC ACAGCATCCG TGATGCTTGT CAAAAAATCC CGAAACCCTA      1140
     ACACGATTAC AAACACCGAC TTGCCCACCA GCTCGACAAA AGTACCAGCT CCGCTCTCAC      1200
     CAACGTATCC CACTTCTCGG ACGAACTCTT TGAATCTCGA AGAGAATCTT ACTTCCTCCC      1260
     CAAGCACCTC TGCCAAAACT GATTTCTCTT ACTTAAGCCC AACAAGTAAA CTGAAAACAT      1320
     GTATGGAACG ATCTCGCTCC CTTAGGGCGG AAGCAAATGC TCTATTAGGA CAAACCTACA      1380
     ACGACGACAA CAATACATTA ATGACCTCAA GATCCAACTC AAACGAATCA ATTGCTTCAC      1440
     AAACCTCAAA CCTACAAACA AAAATCAACA CAACAGACTC AGATGACACT ATGGACGATC      1500
     CCGACTCCTA GTCCTGATCC TCTCACCCTT ACCTTCATAT ACACACACCA CAAATTAATA      1560
     ACAGTCCAAC AAAAAACAAT AAATAAAAAA AAAAAAATTT TTAATCATGA CAATTACTAT      1620
     ATTACAATGG AACATCCACG GCATTTTTAA TAATTACAAC GAACTGACAC TACTCATAAA      1680
     AGACCATGCA CCCGATATTG TATTTTTGCA GGAAACCAAC CTTCCATGTA ATTCTACAAA      1740
     TTTTATTTGC CCCAAAGAAT ATAGTGGTTA CTTCCACAAT TTTTCTTATA ACACCTCAGC      1800
     CAAACAAGGC ATTGGTGTTC TTATTAAAAG GAATGTCCCA CATACATACC GTAACATTAA      1860
     CTCCAGCATA CTCTGCTCCG CACTGCAGCT TAAATTTGAA CAGGTCATTA ATATTGTTAA      1920
     TGCGTACATC CCACCAAGTC AAATCTTTTC ATCCTCTGAC ATATCAGAAA TTCTACAAAA      1980
     TCTTAACGGA TCCACAATAC TCCTGGGTGA TCTTAACTCA TGGAGTCCTT TATGGGGTTC      2040
     GCCTCGCACA AATACAAGGG GTAAAAAAAT TGAAAGCGTA ATTCTTGAAA ACAGCCTAAT      2100
     TGTTCTTAAC GACGGTTCCC CGACTCACCT TTCAACTCAC AACACGTTCA CTCACATCGA      2160
     TATCTCACTG ATATCTCCAC AGATAGCCCA TATGTGCAGC TGGTCTATAT CAGATAATCT      2220
     CCATGGAAGT GACCACTTTC CCATAACCAT CCACATAAAC ACACCTACCC GTCCCGATAA      2280
     CACTTTACCC CTGCCTAAAT ACAAGACAGA CCAAGCGAAC TGGAAACGCT TTAACGAAAG      2340
     TTGCGAAAAA TCAGCAGCAT ATTGGACGGT CGGTTGCCTA AATCAGCAAG TCGCACAAAT      2400
     GACGAAAGTC ATACGAGCAG CTGCAAACTG TAGCATTCCC CAAACGAAAA GAGTGATCCA      2460
     CAAAGCCAAA GTGCCATGGT GGAACGCTAA CCTTCAACAG CTTAGGGACC AAAAGCAACG      2520
     CTTGTTCTCG TCCTACAAAG CCAATACGAA TGATACAAAC CTTATCCGAT ACAAAAAAGC      2580
     AAACGCGCTT TTCAAAAAAG CTGTACTTTC GGCCAAGCGT AACTCCCTTG AAAAATTTAC      2640
     TTCCAAAATC TCCCCAGTAT CCTCCACAAA AAAGGTCTGG TCAGATATAA AACGCCTAGC      2700
     CGGCATCCCT CCCACTCCGT TCAAATATAT CAAATCCAAC TCGGGTACTC TAACTGGATC      2760
     ATTTGATATC GCCGAAGAGT TTGCCTTATC TTGGTCTAAA TACTCTTCTG ACCAAAATTT      2820
     TTCAGCAGAA TATATACGAG TAAAAAATCG GTATCTTTTA GAGCCCTATG CCATCGACTC      2880
     ACTTTCCCCA TCGGCTACAT CCTTAGATTC CAATTTCACA TTGCTCGAAA TAGAAAATTC      2940
     AGTAGCAAAA GCAAAAGGGA AAAGCCCTGG GGCTGACAGA GTATCATACC CTATGCTCAA      3000
     AAACCTATCT CCCCACCTAA AAACAAAACT TTTAGACATT TTTAATCAAA TATTAACCAC      3060
     TGGAAAATAC CCACATACAT GGAGATCGGC TATCATTATC CCTATATCAA AACCTAACAA      3120
     ACCCCCTTCC GATATTAACA GCTACCGTCC AATCTCTCTG TTATCCTGTC TGGGAAAAAC      3180
     ACTAGAAAAA ATAATAGCAC AAAGACTTAC CTGGTTCATT AAACGCCACA ACCTAATTTC      3240
     CCATAATCAA GTTGCCTTTA AAAGAAATCA TAGCACGATG GACGCGTTAT TGCGTATCCA      3300
     ACACTTCGCG TCGAACGCTC TTTCGACCAA AAATCACGTC TCTATCTTGG CGACGGATTT      3360
     TGAAAGAGCC TTCGATCGCG TGGGGATTCA CGCCGTACTT TGCAGACTCG AGCGCTGGGG      3420
     CATTGGTCCA AGGCTTTATA ACCTTATTAA AGCCTTCATG ACCAATCGGT CCTTCAGGGT      3480
     TCGAATAAAC AATGTCACAT CGAACTCCCA CATTTTACAC AATGGAATCC CGCAGGGTTC      3540
     GCCACTTTCG GTGGTTTTAT TTATGATAGC TATTGAAGAT ATAAATGACA TTGTAACTCG      3600
     GCATAAAGAT ATTTACATCT CACTATACGC AGACGACGCA ATAATCTTTA CAAAAATAAA      3660
     AAATATTAAC ACAGTCAGAG AAAAATTCTT AGAAATATTG CAAGAAATTA ACTCGTGGGG      3720
     AGCAACCTCT GGGGCCTCTC TTGCCATTGA AAAATGCCAA ACTTTACATA TCTGTCGGAA      3780
     ACAACGTTGC AACCTTTCCG ACATTGTCTT TAACAGCCGC ACAATAAAAG ATGTAAACTT      3840
     TTTAAAAATC TTGGGGATAA CCTTCGACTC CAAACTACTT TTTAAACAGC ACTGTCAGAC      3900
     TCTAAGAAAA CAACTGGAAA CTAGATTTAA CATTATTAAA TTTCTATCAT CTAAATATTC      3960
     TTACATACAT ATTAAGACTC TCATAGATAT TACGCGCGCA TTAATGCTAT CTAAAATTGA      4020
     CTACGGACTG CCAATCTTCG GTTGGTGTGC TAAATCACAC TTAAAAAAGC TACAAGCCCC      4080
     ATATCACGGA GCGGTCCGTC GCGCCATTCA CGCATTTCCC ACATCTCCAG TAGCGTGCAC      4140
     ATTGGCAGAA TCGGGTCTCC CGAGTATCCA ATCACGCGTA GAAGAAACTA CATTGATGCT      4200
     TATCCCGAAG CTGTACACCA CGTCCAACTG CCTGCTAACC AAAGACTTCG GAGCCATATT      4260
     TAAACAAAAG CGGAAATTCA AGTGCATATC CACCCTAAGA CGTTGCGCCA ACTACATCAA      4320
     GCTACTTGAC CTTCCCCTGC CTAAGCCCAG GAGGCCCTTC AAATCGCCAG CACTTTGGGG      4380
     TTCCAAACAG CCTAACATAA ACCTTCAAAT ATACAATGCT GCCAAAAAGG ATACAGGTCG      4440
     CCTAGAATAC CAAAAACGTT TTATGAGCGC ACAAGAAGAT CTTGGTGTGA AAAACTGGAT      4500
     CTACACCGAT GGTTCTAAAG TCACCGGCGC AACTACTTTT GCGGTTGTTG ACTCTAACCG      4560
     TAAAATAATT GCAGGAGGTA GGCTTCCGTC CTACAACTCC ATATTTACAG CCGAAGCTTT      4620
     CGCCATTCTC AAAGCATGCC AATTCGCTTC CAAAAACGCT GGAAAATCTG TTATCTGCAC      4680
     AGACAGCCTC TCCTCTCTTT CCGCTATACG CAACTGGAAC CATAATGACC CCACAACACA      4740
     AGAAGTTAGG CACATTCTAA GTTCTCACCC AAAAAAAATC ACCTTACTCT GGGTTCCCAG      4800
     TCATCAAGGT ATTCATGGGA ATGAACTTGC TGACAAAGCC GCCCAAGAGA TGAGGCTTAC      4860
     ACCATCAATC CTGTTCACTC CGTTTAACTC CAAGGACCTA AAAAGTCGAA TCAAGTTATA      4920
     CCTCAAAGAA AAGAAACTCT CCGAATGGGC ACTCTTCATG CACAGGTACC AGTCTATCAA      4980
     TCCGAATTGC ATCATGTTCA AGCCACCAAC GAACGTACAT AAACGGGAAT GCGCGACCTT      5040
     TATCCGTCTA CGCATCGGGC ACACCCAATC CACACATCAA CACTTACTGA TGAGATCGGC      5100
     GCGACCAACA TGCCAACTAT GCGGGGACGA GCTCACCGTT GACCATATTC TCAACGCCTG      5160
     CAGTCAATTG CACTCAATTA GATCTCACTT ATTTGGTACA CATAGTCTCT CGAATTGTTT      5220
     AAGTATCCCA TCCTGTGAAA ATATCTCAAA AATTTACAAA TTTGTCCAAA AAGCTAAGTT      5280
     TATTATATAA AGCAATTAAC CCATAAGTCT CGAGTCGAAG GCCCCCGTAG CTAGTACTCA      5340
     TTAAATTTAA TTAGGTTTAG TATTGTATAC TATATTTAAT TTTGTTAAAT AAAATAAATA      5400
     AA                                                                     5402
//
ID   RT1C    standard; DNA; INV; 5443 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063467; Rt1c.
XX
FT   source          nnnnnnnn:1..5443
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 5443 BP; 1389 A; 1524 C; 1572 G; 958 T; 0 other;
     GGGGACGCGC GCGAGTAGCC GTGTGAATCG AGTTGGCGCT CCTGGAAAAC CCCAAAATTT        60
     TCCGTGTCGC GGCGGCTTGA TGGAGACAGG AGTGGCTGTC TCTAACACAC AGTGCCGATA       120
     TGAGTACTCA CCAGCAGTGG GCAAGCTCCA AGTATCCATG GATCGCCCGC CGGCGCCGAT       180
     CCTCAGGGCC ATGGAGCAGG TCAGGGTGAG AGAAGCAGCG AACTTTCTCT GCACTACTTT       240
     CTCTTTGTCG CTGTGTTGTT TCTTTTGGCG TCTTGGCTGC CACCAGACTT GCCGGTCACG       300
     CCAGCTGATC TCGCAGTCAG CTTGGAAAGC AGTGCTGGTA AACGGCTAAA GCACCGCGGT       360
     CTGGCAGCGC TGGTCGGATG CACGAGTCCC CTAGCACAGG TGAGCCGTTT TCTCGGTGAA       420
     AGCACTCACT GACAAAAGCT AGCAGCTACG GAAATCGCCT AACGATCGGT TCACCGGTCG       480
     TAGCATACAT TTTTGGGCGG CTGACGGTTA TCCTTGGCAA CATCCCATGG AAACCCGGAG       540
     ACAGATCCAT AATCGAGCAG GAGAGGCAGA ACAAGAGTGT AAAAAGTCAA GGAGCAGACC       600
     AATAGCCAAC CCCCCCGCTT AGGCGGCACA CTTTAAATCC GGGGCTCTGG CGACCAAGCT       660
     GGAGCGGTAT ATCTCCCACC GTCGCAACTT TCCCCTGCTC ACCCACCCCA TAAGTCCACG       720
     GCGCGTCTGA CCCAAAGTGG GCGGGTACGT GGCCTGCGCC TGTTCTCTTT ACCAGCCGGG       780
     CAGCAGCAAA ATAAAAACCC ATTCAGCGTC TGAGCCAAGT TGGCCGGCGG AATGGTCTGC       840
     GTCTGCGCCG CATCGGCCGG CAGAATATCC AAAACCTGGC GAAAGGTATA AAGCCGCAAA       900
     CCTGGCAGGA GGTATAAAAT GCAACACCTA ACTGGAATGT CTGTAAACAA CTTTATTACT       960
     CCAGGTGGCA GCCACACATG TGGAAATCCA CCCTCGGCTA ATCCCGAGGC TAGGGCACGG      1020
     ATTCTGGAGG CCCTACCAAA CATTCTCCCC AAACCCGCCC CGACGGCGGC ACACTTGGCC      1080
     GTCGGACTAA GCAATGCAAC AAGTGCACCC ACAACGGACG AAGAAAGCTT GGTGTTTGGG      1140
     AAAAGGTCAA AGGTCCTAAG GACCCCACCC CAGAACCCGA GCGATGGCAC CCCCAAGAGG      1200
     CCATTAGAAG CGACATCCCC CCTACCAGAG CCCAACCAGC AAAGCGGGTA AAGACCCCCC      1260
     AGCTAGAAAT CGAGGAGATG GGAGCAATCC TGGACGACCT TCTGACGAAG GTCAACCACA      1320
     ACGGGGTGAG GAGCGTCAAT CAGGCAATGA AAAACTCATT CGCCAGATTG AAGGAGCTCC      1380
     AACTAAAGCT GCGCACAAGG CTGCCGGAGG CGGAGAATTC GCATGTCGGA CGCACCGCAA      1440
     GAGCCGATGC TAGCCAACAG ACCACCCCTA AGCGCCCCTC CAGCCACGAA GAACCGAGTA      1500
     AGGGTCCGCG AAGAAAGCCC AGCGATCCGA CCACCAGAAG GCAGCGGGAC CCAAGCGCCT      1560
     ACCAAGGGCT CCGCCCCAAG CCACTGCAGC GGGAAACAAG ACGCAACCAA GATTGCAGCA      1620
     TCCGCCCGGA CCGCGCAGGA AGAGACCGCC AAGGGAGAGG CCAGATGCGC TGGTTATCAC      1680
     CCCCTCAGCT GGCTTACCGT ACAGCGAAGT GCTGTCGCTG GTCACAAGAG GGCAGGACGC      1740
     CAGGCTCAGG GCCATCGGGG AGAACGTATC AAGGGTTAAG AGGACGGCCA AAGGCGAACT      1800
     GCTCCTCGAG CTACGTGCCT CTGCCCAAGA CTTGACGCAG AAGCTCAAGA TGGACATGGG      1860
     AGCGGTGCTA GGAGACCGCG CCAGCCTTCG CGCGTTAACT CAATCCAAAG TATTTTTGAT      1920
     TCGCGACCTC GACGAGCTTA CTACTGAAGA CGAGCTGAGG AGGGTCCTGG AGTCCCGGCA      1980
     TAGATTCCAG CAGCAGTGGT GGCTATCAAG AGCCTCCGTC AAACGCAGTA TGGAGGGAAG      2040
     TCTGCTATAA TAGCAGTTCC AGCCAATCTG GCGGACCCGC TGATCAAGCG TGGCAAGCTG      2100
     AGGGTAGGAT GGTCCCAATG TCTGATCAAG GAACTGGAGC CACGCCAAAG ATGCTTCAAA      2160
     TGTCTGGAGG AAGGCCACAT AGCGGCCCAT TGTAGAAGCG CCGTCGACAG AAGCCAGTGC      2220
     TGCTTCAGAT GCGGGTCCGC GGGACACAAG GCCGCAGAGT GTCCCAACGA GGCTAAGTGC      2280
     TTTTTGTGCG CAAGCAGAGG AAGCCAAGCG ACCAACCACC AAGCAGGCAC CCGGAAGTGC      2340
     CCATTGGCGG GCAAAGGAGC ACCAAAGGCA CCACAATGAT GCGTTTGATT CAGCTAAACC      2400
     TGAATCACTG CACGGCAGCC CAAGACCTGC TAGTGCAGAC GGTGCGCGAA CGCAGAGTGG      2460
     AGCTTGCGTT ACTTAGCGAG CCCTACCGGA CGGCGGACAG CCCAGACTGG GCTTTCGACC      2520
     GCGCCAAGAA AGCAGCAATC TGGAGGTGCA GCAGAGAAGC CCAACAATTA ACCGATGTTT      2580
     TTTCGGACAT CGGGTTTGTT AGGGCAAAGG TGGGCAGATG GTGGGTGTAC AGCCGGATGC      2640
     TAGAGGCCGC ACCCAGGTTC TCATAGCTGG CGACTTCAAC GCATGGTCAG AGAGCTGGGG      2700
     CAGTTCAACC ACCAACGCGA GAGGCAGGAT GGTGCTCGAG GCATTCGCGA CGCTGGACCT      2760
     GGCTCTATTA AACCAAGGGA ACCGGCACAC GTTCAGGCGT GCCGGACTGG GCTCTGTGGT      2820
     GGACCTCACC TTCACTAGCG GCTCGTCGTT CAGGCTAACG AGGTGGAGAC TCAGCGAGGA      2880
     ATACACTGGC AGTGACCACT TGGCCATCAT TTGTGATCTG GGATGCCCTT CCTCGACCCA      2940
     AGCCCAGCTA GCAGCCCAAG CCAGGATAAA ATACAAAACG GACACCCTGG ACACGCAGTT      3000
     ATTCCGAGAG CAGTTCCTAC CCTCGGTGAG TGGAGAAGGA GCTGAGCTGA CGGCAGTGGC      3060
     GCTGATGAGG CAGCTGAAGA CCGCGTGCGA CGACAGCATG CAAACAAGCA GGACACATAG      3120
     CCAACAAAGA GCCCCTGTCT ACTGGTGGAA CCAGGAGATA GAGACGGCTC GCCGAGAATG      3180
     CCTCTCCGCC AGACGTCGCT ATCAACGCGC TAGAGGTGCG GAGTCCTTTG CCGAACGCCA      3240
     ATCCGAGTAT AGAGCCCGCA GGAAAGCACT CAAGCTAGCC ATACGGGAGA GCAAGCGGAA      3300
     ATGCTTCCTC GACCTATGCG ATTCTGCTGA CAGCGACCCA TGGGGAAGTG CCTACAAGGT      3360
     GGTGGTCAAG CAGGCATATA CGAGGACTCC CAAGCTACTG GACCCAGCGA TGCTCCGCAG      3420
     TGTAGCGGAA CATCTGTTTC CTTTGATGGA CAGGTTACGC CCCGCCGACC CAGCCACAGG      3480
     GGACCACGTC GAAGCCGACG CCACGGTCAG CAGTGAGGAG ATCCTGGAGC TGGCGAAACT      3540
     GCTGAAGGAC GGCAAGGCCC CCGGGCCCGA CGGCATTCCG ATCAGGGCGC TTCGGCTCTC      3600
     TCTACCTCCA GCCAACTCGT TTGCGAAGGC ATTCACCAAG TGCCTGACGG AAGGAGTCTT      3660
     CCCAAGTTGC TGGAAGGTAC AAAAGTGTTG CTCCTCCCAA AACCAGGGAA GCCACCCGAG      3720
     GAGCCTATAT CGTTCCGGCC GATATGCCTC ATCGATGGAA CTGGCAAGCT CCTGGAGAAA      3780
     CTGGTGTGCA TTCGGCTAGA GAGGGCTATC GCAGACGCGG GTGACCTCTC ACGGTCCCAG      3840
     TTTGGCTTCA GGAAAGCGCG GTCCACCGTC GACGCCGTCA ACAGAGTGGT CGAAGTAGCG      3900
     GCCCAAGCAA TCGAGGGCAC CAGATGGAAG GGGGGTAGCA AAGAGTACTG CCTCATGGTC      3960
     ACACTAGACA TCAGGAACGC CTTCAACACA GCGAGGTGGG ACCGGATCCT AGAAGCATTA      4020
     ATTGGCTTCG GCGTCCCAGC CTACCTAGTC AGGATCATTC GCAGCTACTT CTCGGATCGG      4080
     GTCCTACTGT GCGAGTCGTC GGAAGGAGTC TTCAGGCACC AGGTCACCGG TGGAGTCCCG      4140
     CAAGGCTCGG TTCTCGGCCC GCTTCTGTGG AACACCATGT ATGACGGGAT ACTTCGCCTA      4200
     CCGCTGGTTG GGAGGAGCGA GATCGTAGGC TTCGCGGACG ACGTGGCTTT GCTCGTTGTT      4260
     GACAAGCATC CCGGCAAGGC TGAGGAAAAG TGTAACCAAA ACATCAGGGC CATTGAACAA      4320
     TGGCTCAGCT CAATGGGGCT AGAGCTGGCG CCGGAGAAGA CGGAGGCTGT CCTGATTAGC      4380
     TCCAGGAAGG CAGTGGAGAC GGCCACTGTC GAAGTAGGCA GTACCTCGGT GTCCTCCTCT      4440
     CGGGCAATTA AGTACCTGGG AGTCATGATA GACACCAGGC TTTCGTTCCG TGAACACCTA      4500
     GCCTACGCTA GCTCGAAAGC AGCAGGAGTA AATCGGGCGT TATCAACCAT AATGTTGAAC      4560
     ACCCGAGGCC CAAAACAGGC GAGTAGACGG CTGCTGACGA GCGTCACCCG CGCGACCATG      4620
     CTATATGCCG CCCCGGTGTG GGCAAAAGCG CTTGAAACAG AAAGCTACGC CCAGGGCCTA      4680
     AATGCTACCC ATAGACTGTC GGCACTACGT ATCTGCTGCG CCTTCAGAAC AGTGTCCAAC      4740
     GAGGCGGCAT TGGTGATCGC AGGCATACCG CCTCTAGACC TATTAGCGCA GGAAAACAAA      4800
     GTGGTCTTCA ACCAAACCCA CGGTAGAAGC CTCTCCCCCT GCGCCAAGAG GTCAATACGA      4860
     GCAGAAGCAA GGCAGCACAC CCTGGAGACA TGGCAGCACA GGTGGAACAA CGAGCTTAAG      4920
     GGTCGCTGGA CGCATCAGCT GATTCCTAAT CTCAAGCCGT GGATAGAACG GAAGCATGGC      4980
     GAAATAACGT TCCATCTAAC GCAGCTGGTC AGTGGGCACG GTTGCTTTCG CAGCTATCTG      5040
     AAGCGCTTTG GACATGAGGA GGCGGATGAT TGCCCATGGT GCGGAAGTGG ACGGAGCGAA      5100
     ACCGCAGAGC ACGTTCTCTT CTCGTGCGAT AAATATGCAA GGGAACGGAG CTCTCTGGAA      5160
     ACCGTACTTG GCAGCAGACT GAATGCGGAT AACCTAGTCC CATTCATGCT GCAGGGTGAG      5220
     GCGGAATGGC AAGCGGTCAA CAGCTTCGCC GCAGCGATAA CTACCGAGCT CAGAAGAGCC      5280
     GAGAGAGCCA GGAGGGTCCA CGAGTAAGCA AATCTTGATC GTCCTCGCGA AGCAATGCTT      5340
     CACGGCCATA CCGCGGGGGG TTCTGGATTT GCCCTCCTTA CTGTTACATT GTTATATTAA      5400
     TTAATCTTAA TCTTAAATGT CTAATAAACG AATTAAAAAA AAA                        5443
//
ID   GYPSY4    standard; DNA; INV; 6852 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063433; gypsy4.
XX
FT   source          nnnnnnnn:1..6852
FT   SO_feature      five_prime_LTR ; SO:0000425:1..287
FT   SO_feature      three_prime_LTR ; SO:0000426:6565..6852
FT   SO_feature      CDS ; SO:0000316:731..1987
FT   SO_feature      CDS ; SO:0000316:2241..5073
FT   SO_feature      CDS ; SO:0000316:5174..6667
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 6852 BP; 2396 A; 1478 C; 1318 G; 1660 T; 0 other;
     AGTTAACACG CGCAGGGCCA AAATCGCTAA CTCCACGATA AGACCGGACG CGGCCGCAGT        60
     AACGTCAGCG CGACTGCAAC TAAGTCGCGA AATATGACTC CTGCATTCCA ACATTCTACT       120
     GCCCGGAGCG TGTGAAGCGC AATGTCAGCT TCTGCCGTGA GCGCTGCTTC AGAAGACGGG       180
     CTACTTCATA TTAAGCTTAA GTTTTCTGTC TTTAGTTTTA AAACTCATCG AACGCGCATA       240
     GTCGCAAATA AACACAATAA CTAAAATTGT TGTCTGTTAA TTGGCGCCCA CGGCACTCTT       300
     ATAGAACTCA CAATATTTGT TCACCAGCCA AAGCTGTGAC AAATAAACGA AAAAGTGCGA       360
     AGTGAACTGT GACAAACAAA TTACAAGTGC AAAGCTAATT ATAGAACTCA GAATATTTGT       420
     TCACCAGCCA AAGCTGTGAC AAATAAACGA AAAAGTGCAA AGTGAAGTAT TTTTTCCGAC       480
     CAAGAACACA GCAAACAAAG CGAAAACAAG AATAAAAATA AAAAAGCTAA ACAAACGGTT       540
     AAAACAACAT ACAAATTAAA AAGAAAAAAA CGGTTAAAAC AACATACAAG TTAAAAAAAT       600
     AGAACCCCAA CACGAAGTGT CGAGAGAGTA AAGAAAAAAT CAACAAATCA ACAAGTGCAC       660
     GCATCGGCAG TTTAAGCAGT TACCCAGAAA TGAAATACAT GTAAGTGATT TGTTCATTGT       720
     GCCATTATAA ATGCAGAAAA GATTTAGCGA CAGTAGTTTA GAAGACTATA TCCCCTCTTA       780
     CCGAGAATAC AAAAACCGCA CAATGACGCA ACAAGAATCA GTACAGATTG ACCTTCACAT       840
     ACGAAATTGT CTGGCAGAGC AAGCACAAAT ATTTGACCAA AAAATAGCAA CTTTAACAGA       900
     ACAACTGAAC GCTTTAAAGG CTACTGCGCC AGAGGTGACA GCTTATAAGC CTATAGAAAT       960
     CATACCAGAA GTTAGATGTG AAGAGCCCCT AGACATAGTT AAATCTATTC CTGAGTTCGA      1020
     CGGCAAACAA GAACATTATA TCTCTTGGCG CCAAGCGGCC AACGCCGCAT ATAAAGTCTT      1080
     CGAAGCTTAT GACGGAAGTT CTAGGCATTA TCAGGCTGTT GCCATAATAC GCAACAAGGT      1140
     TAGGGGATCT GCAGATGCGA TCTTAGCATC ATTTAATACA GTTTTAAATT TTCACGCGAT      1200
     AATTGCTAGA CTGGATTTCA CATATTCAGA CAAAACTCCG GTTCACGTAA TTCAACAAGA      1260
     TTTAAGTACT TTAAGGCAGG GTGACCAGCC CCTTTTGAAA TATTACGATG AAATAGAAAG      1320
     AAAGCTGACG CTTTTAACTA ACAAAACTCT CATGACCCAC GACGCAGCTT CGGCAGCTGT      1380
     GTTAAATGAC AAATATAGAA ACGATGCACT TCACACATTT ATCTCAGGCC TGAAGAAATC      1440
     TCTAAAATGG GCAGTTTTTC CAGCCCAACT TCGAGACTTA CAGACTGCCC TGGCATTAGC      1500
     ACAAGAGGCA GAATCAAGTA ACGAGAGAAG CATTTTTGCC GCAAACTTTG CTCGGCACAT      1560
     AGAGGAAAAA GCGCAAAAAT CTGGGAATCA GAGGTCCCAA GGTTCGCGTC AAAACCCCCA      1620
     GCAAGAGAGC GACGCTCCCA CTATCTTTAG GAAAAATCCC CATTACCAGA AAGGTAACGG      1680
     TCAAAAGCCG AACACTTCAG GTAGCGCTAG ACAGAGATAT TACCAGAAGC CACAAGAATC      1740
     AACTTCCGAA CCCATGGAAG TAGACACGTC ATCACGCTTT AGACAGCCCA CTCAAGCAAC      1800
     AAATTTTAAA GGTGGTCATT CAGCGAAAAG TCGCCAATCA TTGAACCACA TGCCCCAAGA      1860
     CCAAAAAACC GAATACGAAG AACAGGCAGA ATCCGAGGCA AATGCGGCTG AAGACGATTT      1920
     GTCTGAGGTC GAAAGCTGTA ATTTTTTAGG GGTCACTCCC TGCTTCCGTA CATCACACGT      1980
     ACAGTAGCGG GGCAGACCAT AAAACTTCTT ATCGATACAG GGACTTCGAA AAATTACATT      2040
     AAGCCACTTC TAGGGCTGCC ACACTTTGTG CCAGTCGACA AGCCATTCCA GGTAAAATCA      2100
     CTACATGGTC ATACAAGAAT TGAACGGAAG TGCCAAATTC AACTTTTTAA AACTAAAACA      2160
     TATTTTTTTA TTTTAGAAAA TCTAAGTGAT TTTCACGGCA TTATTGGCCT AGACTTACTA      2220
     AAAAAGATTA ACGCCAATGT TGATTTCGAA AAAAATTGTA TCACTTATGA TCGCGGTTCA      2280
     GAGCCAATCA AGTTTACAAA ATGCCAGAAC GTAAACTTCA TTAAAATAGA CGATGGCGAT      2340
     GTTCCTGAAG TCATTAAAGA TGACTTTAAC AAAATGATTA ATAAAAGAAC AGGGTCATTT      2400
     GCAGATGTTA ATGAGTCCCT GCCCTACAAT ATCAATACAG TTGCCACAAT ACGAACTGAC      2460
     GGGGAGCCAG TATATTCTAA ACTGTACCCT TACCCAATGG GCGTATCCGA GTTTGTCAAC      2520
     GCAGAGGTTA AACAACTTCT AGCGAATGGC ATAATAAGAC CGTCCAAATC ACCTTACAAC      2580
     AACCCGATCT GGGTTGTCGA TAAAAAGGGG GTAGACCAAT CGGGCCACAA GCTAAAGCGT      2640
     ATGGTCATCG ATTTTCGTAA ACTTAACCAA AAAACGACTG ATGATAAGTA CCCCATCCCA      2700
     AGTATTTCAA CCATATTATC AAATATGGGC GAGGCACAGT ACTTTACTAC TCTTGACCTC      2760
     AAATCGGGAT TTCATCAAAT CGAATTAGCG GAAAGGGACC GGGAAAAAAC CGCTTTCTCC      2820
     GTAAACAACG GAAAATATGA ATTCTGTAGA CTCCCTTTTG GTTTGAAAAA TGCGCCAAGC      2880
     ATATTTCAAA GAGCCATTGA TGATGTCTTA AGAGAGCAGA TAGGGAAAAC CTGTTATGTC      2940
     TACGTCGACG ACGTAATTAT TTTCTCTAAC AACAAAGAAG ACCACGTTAA ACACATCGAT      3000
     TGGGTGTTAA ACAGTCTTCA GACGGCTGGC ATGAGGGTGT CTCAAGAAAA ATCCAAGTTC      3060
     TTCAAAAAGA GCGTGGAATA TCTGGGATTC ACGGTATCCC GCGGCGGGAT TCAAACTTCG      3120
     CCAAGTAAGG TTCAGGCCAT AAAAGACTTC AAACCGCCAA AAACCTTGTT TAGTCTCAGA      3180
     TCATTTTTGG GGCTAGCAAG CTATTATAGG TGCTTTAGAA AAGGCTTTGC CAACATCGCA      3240
     CGACCCCTAA CGGACGTCTT AAAAGGCGAA AATGGTAAAA TAAGTGCCAA CAATTCAAGG      3300
     AAAGTAAACC TTGAATTAAC ACAAGATCAA CTAAAGGCTT TTAATAGACT AAAAGACGTA      3360
     TTAGCCTCTG AGGACGTTAT TTTAGCATAC CCAAACTTTA AAAAACCATT CGATTTAACT      3420
     ACGGATGCCT CAGGGCACGG TCTTGGAGCT GTGTTGTCTC AGGACGGACG TCCAATTACC      3480
     TTGATTTCTC GAACATTACG AGACAACGAA GTAAACTTTG CAACAAATGA GAGGGAACTC      3540
     TTGGCCATTG TTTGGGCCCT AAAAAATCTT CGAAATTATT TATATGGCGT AAAAAATTTA      3600
     AATATCTTCA CGGACCATCA ACCGTTGACT TTTGCCGTGT CGGATAGGAA CCCAAATGCG      3660
     AAGATAAAAC GCTGGAAAGC TTTTATTGAC GAGCACAACG CAAATATTTT TTACAAGCCT      3720
     GGCAAAGAGA ATTTCGTGGC AGACGCCCTA TCTCGCCAGA ATGTAAATGT ACTCGAAGAT      3780
     TGCCCAAACT CTGATATTGC CACAATACAT AGCGAAGAAT CTCTTACCTA TACTATCGAA      3840
     ACGACCGAAA AGCCTGTAAA TTGCTTTAGG AACCAGATCG TAATTGAAGA ATCTAACGCC      3900
     CCATCAGTTA GATCTACTAT TTTGTTCAGG GAAAAAACCA GGCACGTTAT AAGATTTGTT      3960
     GACCGTAACA CACTTTTGCA AACAGTACAA GACGTCGTAA ATGCCAAGGT AGTTAACGCA      4020
     ATACATTGCG ACCTACCCAT TTTGGCATTC ATACAACACA GTCTAGTAAA AGCGTTTCCG      4080
     TCAACCACAT TCCGACACTC CAAAAATATC GTGATAGACA TTGTCGATAA AACCGAACAG      4140
     AGAGAAATAA TTATTGCAGA GCATAACCGA GCGCACCGAG CAGCGCAGGA AAATGTGAAG      4200
     CAAATTCTCC GGGACTACTT TTTCCCAAAG ATGAATTCGC TGGCAACAGA GATTGTCGTA      4260
     AACTGTAAGG TTTGTTCAAT GGGTAAATAT AATCGACATC CGGTCAAGCA AGCGATGGGT      4320
     GAGACCCCAA TCCCATCATA TGTTGGGGAA ATATTGCATG TTGACATTTT TAGTACCGAC      4380
     AAAACATTTT TTTTAACATG CGTCGATAAA CTCTCAAAGT TTGCGGTCGT CCAATATATT      4440
     ACTTCACGCG CAATCGTGGA CGTAAAGGCA CCGATTTTAC AGCTGGTAAA CCTGTTTCCC      4500
     AAAATAAGGA TCATTTATTG CGACAACGAA AAATCTTTAA ATTCCGAAAC AATAAAAAAT      4560
     ATACTAAACA ATTTTGATAT TCAGATTTGT AATGCCCCAC CACTCCACAG CACCTCTAAT      4620
     GGTCAAGTGG AAAGATTCCA CAGTACCCTT ACAGAAATAG CCCGTTGTCT AAAAATAGAT      4680
     AAACACCTTA ACGAAACCAA GGACATAATC CTTTTGGCGA CCATTGAGTA TAATAGGTCA      4740
     ATTCACTCAG TAACAAACAG AAAACCGACA GAATTAATTT GCTCCGCCCC TTCGGATTTA      4800
     TTAACAGAAA CTAGGGATAA AATTGTACTT GCGCAAGAAA AACAACTTGG GTACATGAAC      4860
     CGAGATAGAA TCCATAAAAA GTATAAAGTA GGCGAAAAAG TATGGCTAAA ATCAAACAAA      4920
     CGATTGGGTA ATAAACTGTC ACCACTGTGC ACGGAAGAAG CCATTGATGC TGACTTAGGT      4980
     ACGACGGTTC TAATGAAAGG AAGGGGGTGG TCCATAAGGA CAACCTTAAG TAAACCCAAG      5040
     AAAAAAAAAT TAAAAACAAA TATAAATAAA TAAAAAATTT CATCGCTTAT AGTACTTTTA      5100
     ATTTTAATAT TTTTATTACA GGTTAGGATA TTTGTGTGTG CTGGCTTCCG CAATCACCTT      5160
     GACAATAACG ACTATGAAAC TTAATGACTA TTCACACGCA GACTACATAC CTATAATAGA      5220
     CGGTGACTTA ACGATATGGG ACAGATACGG ATATCTCGGA CACACTTCTA ACATAACTTC      5280
     TTATGAAACT TATGTTGAAG ATACCAGACG GCAACTGAAC TACTTTGGAA AAGACCATAT      5340
     GCGAAATTTG ATAACTACTG ACTTGGGGCA CATAGAATCA CTAATAGCTA CGATTAGGGT      5400
     ACACCATAGA CATGCTCGCA GTATAAATCT ACTAGGTACA GCACTCAAGG TAATAGCCGG      5460
     AACCCCAGAC TTCGACGACT GGGAACAGAT TAAATTTAAA CAAGGGCAAT TAATAGATTC      5520
     AGCAAATAGA CAGATCGAAA TAAATACGAA ACTTCAATCT CGACTAAACG AAATTACAAG      5580
     GTCAATGAAT GCAATAAGTA AAACAGACAA CGCGGACTCA GAACACCTAT TTGAAAGTAT      5640
     ACTTGCTAAA AATAGAATAA TTATTACAAA CCTAGAAGAC TTGATACTGT CGGTAACTCT      5700
     AGCTAAAATA AATTTAATAA GCCCACTTAT TTTGGATAGT GTTGACATTC ATGAGCTGGC      5760
     CAATGAACTT CTCACAAATA CGAGCTTAGC AGATATTTTA AGAGTATCTA GCGTTAAAGC      5820
     CTTTCAGAAC AACGATTTAT TGTATTTCTT AATAAAATAT CCTAAACCAG AAACAGTTTG      5880
     TAAAAAAATT AACGTTTTCC CAGTTCAACA TAATAAGATA ATATTAGACT TTGAGAATAA      5940
     TAATGTAGTA GCCGAATGCG GTGCACGAAT CTACGCCGTC AAGGAATGTA ACGCAGCCAT      6000
     GAGTACCACC TTCTGCAAGA GATTGCAGAA CCCGACTTGC GCTCAACAAT TGGTGTCTGG      6060
     AACCGTCGCA CAGTGCACCA CTCTCCTTGG CCATCTGGAT CCGGTGACAC TTGTTGAAGA      6120
     AGGTGTCCTG ATTATCAACG ACGCAACCTT CAGGGTCGAA GATAGCCTAG GCAGCAGTAA      6180
     GATGATCTCG GGAACCTACT TAGCCACATA TGACGATCGT ATATCTCTAA ACGGCACCCA      6240
     CTACGAAAAC CACCAGGGCG TCCTAAAGAA GAAACCCGCT GCGGCAGTGG CCTCTCAGAT      6300
     CAATGTGACT AGCCATCGAG ATCAACTAAG CTTGTCGTTC TTGCACGAGC TGTCGCTGCA      6360
     GAACCTCCAA CATATTGGTA GTCTGAAATC TGACATCATT TCGAGACCCA TTTTAAGCAG      6420
     CGGCGTCACC ATCGCCGTGG TCCTAATTGT TTATGGGATC ATCCAAAGCA TCCGTTACTG      6480
     TCGAGTCAAA AGACGACACC CCGACTCCAG CATCGAGATG ACGATACCTT CCCGAAAAGC      6540
     CGAGGACGAC TTTAACCTAA CGCGGGGAGG AGTTAACACG CGCAGGGCCA AAATCGCTAA      6600
     CTCCACGATA AGACCGGACG CGGCCGCAGT AACGTCAGCG CGACTGCAAC TAAGTCGCGA      6660
     AATATGACTC CTGCATTCCA ACATTCTACT GCCCGGAGCG TGTGAAGCGC AATGTCAGCT      6720
     TCTGCCGTGA GCGCTGCTTC AGAAGACGGG CTACTTCATA TTAAGCTTAA GTTTTCTGTC      6780
     TTTAGTTTTA AAACTCATCG AACGCGCATA GTCGCAAATA AACACAATAA CTAAAATTGT      6840
     TGTCTGTTAA TT                                                          6852
//
ID   INVADER4     standard; DNA; INV; 3105 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063427; invader4.
XX
FT   source          nnnnnnnn:1..3105
FT   SO_feature      five_prime_LTR ; SO:0000425:1..346
FT   SO_feature      three_prime_LTR ; SO:0000426:2759..3105
FT   SO_feature      CDS ; SO:0000316:395..1267
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 3105 BP; 962 A; 545 C; 787 G; 811 T; 0 other;
     TGTCGGAGCG CGACTCTTCG CATTCCAGAA ATTCCTTCTG TGATTTCATA TTCTGATGAA        60
     ATTGTAATAT TGCGGTAAAA TTCTGTCGAG CGCTGCGGCA GAGGCACGAA CAGCCTCTGC       120
     AGCTGAGTGA GGTCCGATCG AGTGGTCATA AATAGTGTGT TAGAGAGAGA TGACAATGTG       180
     GCACACGCCA GTGTGTATAG CCATTAGAGA ATATGATGAA GAAGGGACAT GTAAGAAGAT       240
     CCCTTCAGTG AAGTTTGACT GCTGACGTCG ATCGGAACTT GCTGCGCTGA CGCACAAAAT       300
     CGCGAAGTGA ATAAATAATA TGGATGAGAC TCCTGTTTCG CCGACATCAG AAGTGGGATC       360
     GCCTTCGCCA CAAGAGACCA GATCTGATCA GTATATGGCT GCGTTGGAGG CACAAAACCG       420
     TAACCTCATG GAAATAATAA GAACCATGCA CGCACCGAGA GCATCGGCGT CAAATGAAAA       480
     GTCCTTGCAC GTCACACTGC CAAAATTCTG CGCTGACAGC GCTGGAGCAG ATCCATCTGC       540
     ATGGTGCACC ACCGTGGATT TAATCTTTGC AGATAATGCG CTTGTAGGCA GTGCACTCGT       600
     AATAGCGTTA AGCAAAGCAT TAGAAGGCAG TGCATCGCAA TGGCTGTCGC AGATATGCTT       660
     CGCTGGCATC ACGTGGCCGC AGTTTAAAGA ACTGTTCATA CAGCGATTCG TAGGAATGGA       720
     GACGTCGGCT GCTATTTTGA TGAACGTTTT GAACGGACGT CCAACACCTG GAGAGAGCTT       780
     TGCCCAGTAT GGAAGTCGCA TTGTCACCTT GTTGCTGTCT AAGTGGAAGG CCAAGGATTT       840
     GGAGGAGATT GCGGTTTCGG TAGCGTTGGC TCACATGGCA CAAATCGATA ATAATTTGTT       900
     GCGTTGGGTG TTTACGACTA ATGTGGCTAC GCGCAATGAG CTTCAGCAAC AACTGCAAGC       960
     TTACGCCTTC AAGAAACGTA ACAACGAAGA TGATTCTGGC CCAGAAAAAA AGTTAAGAAT      1020
     GCAGTTGCAG ACCATGTGCC ATTTTTGTGG GAAAGCTGGC CACAAATTCG CCGAATGCCG      1080
     TGCTCGAAAG GAAGGTACAT CAAACACAAA AGGAAGAAAC TACAGCGAAA GCAACACGCC      1140
     TGGGTTAAAA GATCGTTCGA ACATAAAATG TTTTAAATGC GACGAAATGG GACATGTGGC      1200
     GTCTGTATGT CCCAAAGGCC ACAACAAATA CATCGAAAAG CGAGTTGACG TGTGCGAAAC      1260
     TAAGTGAGCC AAGTGGACTG TGTTTTTCAA TTGGGTGAGC CCTTTCCATT TTTTTTTTTG      1320
     ATTCGGACGC CGAATGTTCT TTAATAAAAT TAAAATAAAT TAAGTAACAA ATTAAGAGCT      1380
     TGGTTTCGTT TTATTTATTA AATCTAATAA ATTTAGTATG TACAAATCCA AAGTTATCAA      1440
     AGCCGTTCAA AATAATGCAC ATGAGAATAG TTTGGAAATA CTCTTTGACA TCAATATAGA      1500
     AGTAAGCGAT AATGATAAAT GTAAATTAAG AAATATATTG GAAAAGTATG CCGATAGTTT      1560
     CGTAACTGGA ATACCAAATA AGGCGCATTG AAAATTCGTT TAAGTAATAA AAATAAAAGT      1620
     GTTCAAGGGC GCCCATAGCG ACTCAGTTTC CATTGCTACA GATTTTGGAT CAAATAGATC      1680
     GTTTGCGGTG TGGTAAATAT TTTTTTCATT TGTTTTAGAC ATGGCCAGCG GATTTTATAA      1740
     AATACCGATT CATCCAGATT CTATAGAAGA GTCAAGTATG TCTTTCCTTA GAGCTCCCAG      1800
     TCGCATCATA GTGGATCAAG GCAGAAGCTT TGTCAGCAAC AAGTTCCGTG AGCTTTGTTC      1860
     AACAAACAGG ATTGAGTTGT TTTCAATAGC TACAGATGCC AGCAGAGCAA ATGGGCAGGT      1920
     TGAAAACAAA TGAGCGTCCA AGCAAGGAAA ACATGCGAAA GGATGTAGAG TAGTTCGGTA      1980
     TGAGGTCATG TGTTAAGTGA GAAGTATCAT CGAGTGATTA ATGTACTAGA TGGTCATCGA      2040
     CACAATTTGA AGTCGTTAGT TATCAAGCGA ACATATAAAT ATTCGCATGA ATGTAATGGT      2100
     GACTCCCAAC AGAGAAAAGA GTTGAAGGAT GGCACTAGTG ATCGTGCATC TGTGTCCCAA      2160
     GAGAGAAAAG AGTTTAAAGA TGGCACTAGT GATCGTGCAT CTGTGTCCCA AGAAAGGAAA      2220
     CATTTGGCGA ACTGTTATGA ATAGAATGGC GTGTGACCGC ACTATAACAG CTAACTCGCA      2280
     GGGACGAGAA GTGTTATGGC GGGGGTCAAG TGATGATGAC TGCACTATAA CAGCTAACTC      2340
     GCAGGGACGA GAAGTGTTAT GGCGGGGTTC AAGTGATGAT GACTGCACTA TAACAGCTAA      2400
     CTCGCAGGGA CGAGAAGTGT TATGGGGGGG GTCAAGTGAT GATGACTGCA CTATAACAGC      2460
     TAACTCGCAG GGACGAGAAG TGTTATGGCC GGGGGTCAAG AGATTGGGTG TGAGAGAAGA      2520
     CACGCCAATG TTATTATGAG AAATTAAAGT CATGGAAAAT GTAAATAGTT TGAAGTTTTG      2580
     ATATGTAAAT TGGAGATGTC TTTGTTAAAG AAAAATCAGT CATGAGATGA ATTGTCAATT      2640
     AAATAATTAC TGATTATTAC TTGTTGTCAT TAATTGTTCT TAAGTTGACG AAGTTGTGTG      2700
     ACTTGGACTT GATTGGTGGA TTAGGCACAC GAGGGACGTG TGAAAGGTCA GGAAGGCCGT      2760
     GTCGGAGCGC GACTCTTCGC ATTCCAGAAA TTCCTTCTGT GATTTCATAT TCTGATGAAA      2820
     TTGTAATATT GCGGTAAAAT TCTGTCGAGC GCTGCGGCAG AGGCACGAAC AGCCTCTGCA      2880
     GCTGAGTGAG GTCCGATCGA GTGGTCATAA ATAGTGTGTT AGAGAGAGAT GACAATGTGG      2940
     CACACGCCAG TGTGTATAGC CATTAGAGAA TATGATGAAG AAGGGACATG TAAGAAGATC      3000
     CCTTCAGTGA AGTTTGACTG CTGACGTCGA TCGGAACTTG CTGCGCTGAC GCACAAAATC      3060
     GCGAAGTGAA TAAATAATAT GGATGAGACT CCTGTTTCGC CGACA                      3105
//
ID   BAGGINS    standard; DNA; INV; 5453 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063440; baggins.
XX
FT   source          nnnnnnnn:1..5453
FT   SO_feature      CDS ; SO:0000316:398..1771
FT   SO_feature      CDS ; SO:0000316:1771..5385
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 5453 BP; 1576 A; 1325 C; 1418 G; 1134 T; 0 other;
     GGCCGCCACG CCAGTAGGTA TCACAAGGGG ATCAACGCGC CACCAACGGT GGTACGCGCC        60
     GTAATTGTGA CACACTACTG GAAGTGCAAC TACACTCTCC ACGCGAGGGC GGCTGGAAAC       120
     AGGCTCTTAG TTAGGTCATG TCTCTGCTAA GAGTGCTGGC TAATCGTAGT TGGGCTGGAG       180
     CTGGTAACTC TCAAAAATTT CCACATCTCC GGGCCGGACT AAGGTGTCAT TCGACCCGTG       240
     CCGAGAGTCT GCCAGGCTGG GGGCCCGGGA AACAACTAGC CCAGTCGCTA ACGGAGAGTC       300
     CGGGCAAGTG GCGTCCGCCC GGTCTGGTTA GCCTTACCCG GGTACTGCGG ATCTCTGCCC       360
     GGGTGGACCG TTTATTTCTC TGCAACTCGT GGGAACCATG AACAATAGAC CCAAAAATAT       420
     TAAAATACCG CAGGCCTTGA CTGCGGGAAA TGTCGCAAGA CAGTTTGAGG ACCGTCTCCT       480
     TGACGGAGAG CGGCCTACTT CGGTGGTAAC ACCAAAAAAT GCTCCTAATC GGAGTGTGCC       540
     AACGGCACAA GCACGCCCAG TTGCGGGAGG GAAGAATCGG GCAGCCACAC CGAGTCACTC       600
     GACTGTGGTC CAAGCCGGCC AAGCGGGACG GGCTAAAAAC CCATTACCGC AACTTGGTCA       660
     GCCTGGGGCC CGGGATGACC CTAACCGTAA GGGGCTGAGC GGGGCCAGAA CGAAGTGGTA       720
     TCTTCGTTAC CTTCAGCAGG GCAAGTCACC CGCAGAAGCT TTGTCTCTGG CCAAGACACC       780
     GCAGCCGCTA GAGCAAAGGC CCAACTCTGC TTCGAAGCGG GCAAACTCCA CCCTGACGCC       840
     TCCGACGGAA ACGCCTAAGA GGCAGAAGGT GGAGAAGAGC AGGCCACTGA CTGCTCCTTT       900
     CGATGGCCCA AGTACCTCAA GGGCTGCAAA GGCAACTGAG GTACGCAAGC CATCATATGC       960
     GGCCGTAACT GGGGCCATTA AAGTTGCGGT CGTACCAGAG GGGTACCCCA AAGTCGTCCT      1020
     CAGCAGTGAG AACCTCTCAC AGCTCGAGGA CGCACTACTG GAAGAGATAG TCCTCTCCGG      1080
     TTGGGATTCT CCAATTAAGT TTGGAGGAAT CCACTTCAGG GTGGGTCACC TGATAGTGGA      1140
     TTGCCGCAAC GCAACCACTG CTGAGTGGCT GCAATTAGCA GTCCCCAGCC TCAGTAAGTG      1200
     GAGCGGTGTC TCCCTGGAGG TAAAGATGGG CGACGACTTG CCATCGTCAC ACAACATCAC      1260
     CATCTTCTGC CCCAGGACAG GAGACAAGAC AACAAAGTGG ATCATGGAAT TGATCAAAAA      1320
     ACAAAATGAC TTGGACACTG AGAACTGGCG TCTTATATCA AGGAAGAATG AGGGTGGTGG      1380
     CTCGCTCCTC AGCCTTGGCA TTGATGACAA CTCATGTGCC AAGATTATTT CTAGCGACCA      1440
     CAAGCTGAGC TTCAGGTTTG GAGACATCTC AGTTTGTGGT CTAAAGAAGG CCAAGGCGAT      1500
     CAAAGCCGGC ACAAGACGGG TCGAGACTCC TCGAAATCCA CCAGTCTCCG CGGAGAAGGA      1560
     GAAGCCCAAT AAGCTCTCCG AATCCAGCGA GGATCTGGCG GATGATGAGG ATCTCGATGC      1620
     GACCGTCATC GAGATGGGGG ATCAGACCCC GATATCCTCT CAGGAGCTAG GCATGGAACT      1680
     AGACCTGCTG AGTAAGGAAG AAGCGGTACC GGCGGATGGT GATCTGGGCA TCTCCAGATC      1740
     AGCAACGCCG ACGATGGAGC CGATCATCTA ATGGTCGGGA GTACAGGGAT AGCTCAGGTG      1800
     AACATCCATC GCGCCAAGGC GGCCTCGGCC GTGCTGGCAA GGATGTTCAC CAAGCAACAT      1860
     CTTGGGCTAG CCCTGGTACA GGAACCCTGG TATAACCAGG GAATAAAAGG ACTGTACGTG      1920
     AAGAACGCCA AGGTAATTTG GGATCAACGG GCTTCTAGCC CTAGAGCCTG TATCCTGGCA      1980
     TGTAGAAGTA TTAATTATTA TATACTTACA GAATTTCTCA CGCGGGACTG TGTACCGATC      2040
     GTGGTAGAAG ATGTGGGAGC AGCCAAGAAG ACTGTGGTGG CATCGGCATA CTTTGCCGGT      2100
     GACGAGGCGT GCCCACCGCC CGAAATCACT GCACTGGCTG AACACTGTAA GAGGATGCAC      2160
     TCACCCATCA TCATTGGATG TGATGCAAAT GCACATCACG TGATATGGGG CAGCAGCGAC      2220
     GTGAACCAAA GAGGTGAGTC ACTCTTAGAA TTTATCTTGA ATAACAATCT AGAAATCCTA      2280
     AATGTCGGCA ATGTTCCGAC ATTTGTTACT AGGGTAAGAT CTGAGGTTCT GGACATTACA      2340
     CTTTCCAGCA GATCAGTGGC TTCGCATATA AGCGACTGGC ACGTATCTCC TGAGGAGTCA      2400
     ATGTCAGATC ACAGAATTAT TCGTTTTAAC ATAGGGCTAA ATCTAGAATG TAGCGAGCGT      2460
     AAGCGCAATC CCAGGAATAC GAACTGGGAA GGGTTCAATG CCTCCTTACT GCGAGATCCA      2520
     GTTACTAGGG TAACCGGGAA ACTCCGTACC ACTCTAGAAC TGGAGGCCGC CGTAGAAGAT      2580
     ATTAACTCGT GTCTTACTAA CGCGTTCAGA GAAAACTGCT CCCTTGGCCG AGCCAAGAGG      2640
     GATAAAGATG CTCCATGGTG GAACGACCAA TTGGAGAAGT TACGGAAAGC GACCAGGCGT      2700
     CTCTTTAACA AAGCAAAAAG AGAAGGGAAC TGGGATGCCT ACCGGAATAA ACTGACCATG      2760
     TATAACCATG AGATCAGGAA AGCCAAACGA AGGAATTATA GAACCTTCTG TGAGGCAATA      2820
     GTAAACACAT GTGAAGGCGC TAGACTTCAC AGAGCAATCT CCAAAGGAGT GCCAGAATCA      2880
     AATCAGGCAC TACGAAAGGA GGATAACTCC TATACTATAG GAAGTAAGGA GAAACTTGAG      2940
     CTACTACTGG CAACTCACTT TCCGGGAAGC ACGCTTCAAA CGGATGGGAA TACCCCGGTA      3000
     ACGGCACAAA GTAGACCGCG TGCTACTGAT TGGGCCAAAG CAAAATCAAT AGTAACAACG      3060
     GAGAGATTAA GATGGGCAAT TGGTACATTC CAGCCCTACA AATCTCCTGG TCCAGATGGC      3120
     ATTCAGCCAA TCCTGCTTCA ACGAGCGCTA AGTCAGCTCG CAGTACCGAT CAGGAAAATA      3180
     CTGATCAGCA GCCTAGCTTT AGGACACATA CCTACTGCCT GGAGTATAGC AAAAGTGGTC      3240
     TTCATTCCGA AAGCTGGAAA GAAAGACATC ACTGATCCGA AGTCGTTCAG ACCCATCAGC      3300
     TTGACATCGT TTTTGCTAAA AACGTTGGAA AAGCTAGTGG ATGTCAGCAT TAGAAGCACT      3360
     CTGCTTGTGG AGCATCCGCT CCAACGGACG CAGCATGCCT ACAGGGCGGG CAGATCAACT      3420
     GATACTGCCC TATATCACCT GAAAAGCCTT ATTGAGGATT CACTGACTCA TAAGGAAGTG      3480
     GCGTTATGTG CCTTCTTAGA CATACAGGGT GCTTTCGACA ATACCTCCCA TGAGGCTGTC      3540
     AACGCATCCC TGGCAAGAAG AGGACTAGAT GCGACAACCA GCAGATGGAT CAAATCACTA      3600
     CTGGCATCTA GGCGAGCCAT GGCCACTATA GGAGGACAGT CGTCCACAGT ATCTACCACA      3660
     AGGGGTTGCC CCCAAGGGGG TGTCCTCTCG CCTCTCCTGT GGAGCTTGCT GGTAGACGAG      3720
     TTGCTGGACA GACTGACCCG CAGGGGTATA CTTTGCCAAG GCTATGCTGA CGATATTGTC      3780
     ATTATAGCTA GAGGTAAATA TGAGGAAACA CTCTGCGATA TCATTCAACT GGGCCTCAAT      3840
     ATGACCAGCG AATGGTGCAA GGAAGTAGGC CTGAGCCTAA ATCCTAGCAA AACTGTTATT      3900
     GTTCCTTTCA CAAATAGGTA CAAGCTACAG AGAATGAAGG CAATAACCCT GTCAGAATGT      3960
     CGCATAGAGG TCAGCAAAGA AGTTAAGTAT CTTGGGATAA CCCTTGACTC CAAACTTAGC      4020
     TTCAAAACTC ATGTCGATAA CACAATTGAT AAGTGCACCA GAGCACTTTT CACGTGTAGA      4080
     AACATTGCTG GTAAGTCGTG GGGAACCTCA CCACGCATAA TAAGATGGCT GTACCTCATG      4140
     GTAGTCAGAC CCATACTAAC CTATGGGGCA ATAGCCTGGG GTGATAGAGC ACGCCTTAGC      4200
     ACCACTAAGG TGAAACTCCA TAAGCTGCAG AGAATGGCCT GCGTATGCAT GACAGGAGCA      4260
     ATGCGTACCT GTCCCACTGC AGCCCTAGAA GTACTAATGG AGGTGACGCC GCTTCATATC      4320
     GTCATTGAAA TGAAACGGAA AGCCACCCTA ATAAGAATTG AGGGAGCAGG AAATGACTGC      4380
     AACCTCACAA GTAAGGATGC TGAAAGCCTA AAAAGGGATA TCCCTTTGCT AATGCAACCA      4440
     AGGGATGAGA TGCCAGCTGA GCATAGGTTC GCTCAGAACT TCAGCACTCA TCTCAGTAAT      4500
     AAAAACAGTT GGACATCCCT GGGGAAAGTA CACCCTACGA AACCACAAAC AATAAAGTGG      4560
     TATACAGACG GATCCCTCAC CGACGAGGGA AGTGGGCTGG GGGTTGTAGG CCCCAGGTTG      4620
     AAATACCACG AATCAATGGG CAGATACACC AGCATTTTTC AAGCTGAAGT CTGTGCTATT      4680
     GGACGCTGTG CGGAGTTTAA TCTGCAAAGG AACTATCGTG GCAAGGACAT TGCTATACTG      4740
     TCTGATAGTC AAGCAGCCAT AAAGGCGCTC AGCAAAGCTA AGATAACATC TAAGCTAGTA      4800
     AATGAAGTGA GGACAGCCCT AGACAAACTA GGAGCTGTCA ACAAACTCAC AATAAGGTGG      4860
     GTCCCGGGAC ACAACAACAT CCCGGGAAAT GAGCTAGCGG ACAACCTAGC CAGGAAAGGG      4920
     GCAGAGAACC CTCTAATTGG GCCCGAACCC TTCTGTGGTG TTGGTCACCA CAGAGTACTG      4980
     GGCTTACTTA AGTCAATAGA GGAAGAAAAA CGTCTGTCCT TCTGGGAACA CCTACCAGGA      5040
     CTTAGGCAGT CTAAGATTCT CCTCCGTGAA TATAACCATA AAAGGTTCAA GACCTTAATG      5100
     ACACACGGGA AAAACACCGT GCGCATTTTG ACTGGCCTTC TTACGGGGCA TTGCCGACTT      5160
     CACAGCCATT TGCACAAGAT TGGCATTGCA GACAGTGAAC TCTGTCGCTT CTGCTGCATG      5220
     GAGGAGGAGA GCTCTGCACA TATTATATGT GACTGCATGG CGCTTTCCAT CAGGAGGAAC      5280
     AGACTCCTGG GCATGTATGT AGTCCCACGG GAAACAATTG CAGCCCTGAA CCCCAATAAA      5340
     ATTCTGGCAT TTATACAGTG CATTGGACTT CAGGGGGATC TTTGAGTCAT GAAGGGGTAG      5400
     TACAATAGAT CCGACTGGGT CGCAGTACAC ATACAAACCC ACTTAATAAT AAT             5453
//
ID   G3    standard; DNA; INV; 4605 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063506; G3.
XX
FT   source          nnnnnnnn:1..4605
FT   SO_feature      CDS ; SO:0000316:787..1818
FT   SO_feature      CDS ; SO:0000316:1982..4504
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 4605 BP; 1656 A; 977 C; 840 G; 1132 T; 0 other;
     CAAATTCGTG TCGTTTTGGC TGTGCAAAAA GAATTTACTG TGTGCATAAA CACACACACA        60
     TCATTGCTAT TGTGTGTTCA GTTTGGTTGC TGGCTACCGC CAAATTCAGA AACCTGTCGC       120
     CTCAAGATCG CTTACAGGAG GCAAAAAGTT GTCTTTATAC CAAAAATGCA TTGAAAGTGC       180
     GCATCACCTA CGACATTGTA ATGCCGATCG CTGTCGTATT TGTGGAAGCA AGCACAACAA       240
     TTTGCTAATT TTTGTCTCAA GGCCTTCGTC ATCTCGGTCC TAGCCTGCTC AGCTTCAGCT       300
     ACCATCTGAT GCTCATTCCA AGTAATTGCG AGTAGTTGCA CAGGAATCAT AAATAAATAA       360
     ATCTCATCAA TGGTCAATCG TCTTTCTTAG TGGCTCAAAA TCTCGGAGCA GACTTTGTGT       420
     TGTTGGCCAA AATAAACCAG GTTCTTGGGT TCCTTATCGC ACCTTGCTTG TCTCCGGCTC       480
     GCAACTACAC ATAATCACCT CTCGTCTGGT ACGCACTTAG CAATCGCCCA AGTACAATTC       540
     TGCCGCTACA GTTTTTGGAA TTGGTGAAGC CAGATTTAGC GTTCATTTGT CTGTACAAAA       600
     AACAAAAAAA AAAAAGAAAA CTGATAAGAG ACTCCAATTT AGCTGCTGTA AAGTACCAAT       660
     TTAAGATGTC AGCAGAAGAC GAAAGCAATA TTTTTGCGTG GCAATAAGTG CCCACAAACC       720
     CACGTTCCAT TAAGCGAAAA AATGTAAACT CCCCAACGGT GGCGGGGAAA GTTATGACTA       780
     TCGACCATGG ACCTTCCACT TCTAGCCATG ATAACTACTT TGCTGTGCTT GCTGAAAAGG       840
     ACATGTACAA ATCCAACAAA AGATGATGAA ATTAAAAGCG ATACACCATC ATCTGAAAAA       900
     CCACCCCCAA TTTTTATATC TGATGTCAAT GATATCAACG GATGGCTTCG TTACCTTAAC       960
     TTACACATGG ACAGCACTGA ATTCACGTAC AAGTCACAAC GGGACGGACA AACTCGCATC      1020
     ATGGTAAAAA ATGTTGAAGA ATTCAGGGAA TTAGTCAAAA AATTAAACAC TGACCAAGTG      1080
     AAGTACCACA CATTCCAGCT TAAGCAAGTT AGGGCATTTA GAGTTTTAGC CAAAAACATC      1140
     CACCACTCCA CCGATATTGA AAGCATAAAG AAGTCAATAG AAATGCAAGG CCACGTAGTT      1200
     AGAGGAATTC ACAACATTAA AAGCCGCATT ACCAAGGAGC CATTACGAAT GTTTTTTATA      1260
     GACCTAGAAC CACATAACAA CAACTCCGAG ATCTACAACG TAAAACATAT CAATAATGCT      1320
     ATAATAACAA TTGAACCACC AAAGAAAGTT AGTGACATGG TGAAATGTTA CCGATCCCAA      1380
     GAATTTGGGC ACATCAAATC ATACTGCAAT AAAAAATTCA GATGTGTTAA ATGTGCTGAG      1440
     AATCACTCAA GCATCTCCTG TCCAAAAGAA AAGACTGAAC CAGCCACTTG TGCCAACTGC      1500
     CATGAAAACC ATGCCGCTAG CTACAAAGGC TGCAGAATCT ACCAAGAAAT TTCCAAAAAA      1560
     AGGTCCAATG TACCCAACAG CAGGCCAGCA CTAACATCTC TTTATGACAT ACCGAGAGCA      1620
     ACATCATTCA TTCCAACGAA ACCAAACCAT GAAAAAAGTT ATGCGAATCA AGCTAATTAT      1680
     GCACAGGTAG TACGAGATGA GACTGAACAA GAAAAATCAA CATTGGATAG AATTGAAAAG      1740
     CTATTAATGA AGCAGTCTGA GCTTACATCG AATTTACTAA ACATGATAAT GATGTTAGTA      1800
     AACAAACTAT GCAAGTAGAT CTTCGTATCC ATCGTATATC CATATGGAAT GCTAACGGCT      1860
     TTCCAACCAT CGAAATAAAA TAACTTATTT ATTAAAACCA GAAATATTGA TATTCTACTA      1920
     ATTTCGGAAA CGCACTTTAC AAAGAACAAT TTTATAGCCA TTAAGGGATA TAACGTCATA      1980
     AATGCTAATC ATCCATCTGG GTGGAAGTGC AGTTATTGTC AAAAATACTT TCCAGTACAA      2040
     ACAAATAGAC AACATCTGCT CAAATATAAT GCAAGTGGCA TCGATTGAAA TAAAATGTAT      2100
     GCATTCAAAT ATCTCTATAG CTGCAGTATA CATCCCACCA AGACACTCTT GGAAGCTCGA      2160
     TGAAATCAAC TCTCTCTTTC GAGGGCTAGG AAGACACTTT ATTGCTGGAG GCGACTATAA      2220
     CGCAAAGCAC TCATGGTGGG GGTCAAGATT AGTAAATCCA AAAGGCGCAG AACTATACAA      2280
     ATGCATAACT AACAATAAAT ATTCAACCTT ATCCACCGGA AAACCGACGT ACTGGCCAAC      2340
     AGATCTTAGT AAAATTCCAG ATCTGCTGGA TTTTATTGTA TTCTCTGGAC TACCAGCAAG      2400
     CAATTTCCAA ATAGAGGAGA ATTTTGATTT GAGCTCTGAT CACACACCGA TTATTGTAAC      2460
     CTATGGTACT ACAGTTTGTT TCAAACAGAA GCCATACAGA ATAATTAACG CAAAAACCAA      2520
     TCTAGGTGCT TTCAAAAACT GGCTCGAAGA ACGAATTTGT CTAAATGTAT CGTTAAAATC      2580
     AGGGGAAGAA ATTGAGTCTG CAATTGAAGC TTTGACAAAT TCGATTCATG CAGCTGGGTA      2640
     CATGTTTACT CCACCGCCAA ATGAAAGTAC AAGCAGGCAA ACTTTTCTAC CACTAGAACT      2700
     AAGAGCGCAA ATAGCTGAAA AAAAAAAGCT TCGAAAAATA TGGCAAACCA CGCGAAGCCC      2760
     AATAGACAAA AGAAAATTCA ACAAAGCTGT CAATAACCTG AATAGCAGAC TGTGGGAAAT      2820
     TAAAAATGAA GCGACAGCCG AATACCTTCG AAATCTTGAT CCAAACACAA GTGACCTTTA      2880
     TTATAGTCTG TGGAAAGCAA CTAAATATCT AAAGAGGCCA ACCAGAAGGG ATACCACAAT      2940
     TGTTAATAGC ACGAGACATC GCTGCACAAG CAACGCTGAG AAAACTGAAG CTTTTGCTGA      3000
     ACACTTAAGC TCAGTCATTC AGCCAAATTT GGAAAATGAT CCTGAAACAG TAGCTGAAGT      3060
     ACATAACTTT TTAGAGGCTC CTTGTCAGAT GAGCCTGCCT ATTAACCAAA CTACTATCTC      3120
     AAAAGTAGAA GAAGAAATAA AAGAGCTAAA CAGGAAAAAA TATCCAGGAT ATGACAAAGT      3180
     CTGTGCAATT ACAATCAGAA ATCTCCCTCC AAAATGCATC CGATTGCTGA CACACATATA      3240
     CAATGCCATG CTCAGACTGG AATACTTCCC CAGTCAATGG AAATGCGCGG AAATTATAAT      3300
     GATTGCTAAG CCAAACAAAC CGGAAAACTG CACGTCTTCA TACCGTCCCA TTAGTTTGTT      3360
     GGGGACCTTC TCTAAAGTAT TTGAACGAAT ACTTTTAAGA AGAATGTTAC CTGCACTGGA      3420
     CGAACTTAAC ATCATATCCG AACACCAGTT TGGGTTTAGA AGAGGGCACG GAACGATTGA      3480
     GCAATGTCAC CGCATCACTC ATGCAATAGT GAACGCATTA GAAAACAAAA ATTACTGCAC      3540
     GGGAGTATTC CTGGATGTCA AACAGGCATT TGACACAGTC TGGCATGAAG GTCTTCTGTA      3600
     CAAAATAAAG AAGTGGCTAC CCGCACCATA CTTCCAAATT ATATCGTCCT ACCTTAAGAA      3660
     TAGAATATTC TATGTTCGCG AACATGACGA ATTTTCAAGT ATCTACACTG CTGAGGCTGG      3720
     AGTTCCACAA GGGAGTGCTT TAGGTCCAGT GCTGTACACA ACTTCCACAG CTGACTTACC      3780
     GACTACAAAT GCTGTTGAGA TAGCAACATA TGCTGATGAT ACTGCTATTA TTGCCACGAG      3840
     TAATGACCCG CGCGTCGCAT CCAACTTAAT TCAAGAAGAA CTAGGGTTAA TTGAAGCATG      3900
     GCTTAAAAAA TGGCGAATAG CAGTAAACGC ACAAAAATCA GTGCAAGTCA CATTCTCGTT      3960
     GAGACCCGGG AGTTGCCCGC CAGTTACACT AAACGGCTCC ACCATACCAG TTAGTGAAAC      4020
     GGTGAAATAT CTTGGAGTAC ATCTGGACAG GCGTCTCACT TGGAAGCAGC ATATAAAAGC      4080
     GAAGCAAACT CAGTTAAAGA AAAAACCAAA AAAAATGTAC TGGCTCTTAG GACCCCGCTC      4140
     TCAATTAAGC CTAGAGAACA AATTACGGCT GTATAAAGCA GTCCTAAAGC CAGTATGGAC      4200
     CTACGCGATG CAACTGTGGG GAACATCTAG GAACTCTAAT ATTGAAATAT TGCAGAGATA      4260
     CCAGTCTATG ACGCTAAGAA CAATCACAGG TGCTCCATGG TATATGACTA ATCATGACAT      4320
     CCACAAAGAC ATGGAACTTC CCCTTGTTAA AGACGAAATA AAGTCAAATG CAGAGCGATA      4380
     CATAAGTAAA CTACACGACC ATGATAATGT CCTAGCACTA GGCCTACTAG ATAACACCAG      4440
     CAACCGAAGG CGACTAAAAA GATTTCATGT ACTGGACCTG CCATATAGAT TTACAAATAG      4500
     ATAAAAATAT GTAAATATGT ATATATATGG ATTGAGCTCA CTGGAGCTCA ATTCATCCGG      4560
     TGATACAATT ATTTAACGCT ACAGATTGCA AATACAAAAA AAAAA                      4605
//
ID   MARINER2    standard; DNA; INV; 912 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063401; mariner2.
XX
FT   source          nnnnnnnn:1..912
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..29
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:883..912
FT   SO_feature      CDS ; SO:0000316:134..802
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 912 BP; 257 A; 213 C; 204 G; 238 T; 0 other;
     CAGGGTGCGG CAGCATAACT TCCTTTTTTA AAATGCGCGC CATTCAGTTA GTTGATGTCA        60
     TAGCGGAGCG CTAGTGGTCC CGTTCAAGAG GGGCTACTGC AAAGTTTTGT CCCGACACGG       120
     TTCAGTCGCC ATCATGCGTT GGAATAGTGA GGAGCGTGCC TTTGCCGTTG AGGCCTACTT       180
     TTCAAGCGGA TGTTCGGTTA TTAAAACACA GCGTGCATTT CGGAATCGCT TTAATTTAGC       240
     CCCGTTGGCT CCCGTCCCAG ACCGCAAATC AATTGTTACA TGGGTCACTA CATTCAGGCA       300
     AACTGCAAGT GCGACAAAAC GAAGAACTGG AGTCCCTCGA CCCGTTAGAT CACCTGAGAA       360
     CATTGAAGCA GTGAGAGCGT CAATATTGCG ATCTCCACGG CGTTCTGCGC GCAAACACGC       420
     ATCTGCCCTT GGACTTGAGG ATTTGGGGGA CACTTGGTTC CAACAAGACG GTGCAACAGC       480
     ACACACTTCA AGAGCATCGA TGGCTGTTTT GAGGGAACAC TTTCCAGAGC GCCTTATCTC       540
     AATTAGAGGC GATTTGGAAT GGCCGGCACG CTCTCCCGAT CTGTCCCCTT GTGATTTTTT       600
     TCTATGGGGT TTTTTGAAAT CCCGTGTTTA TGTGAACCGT CCAAGAACCC TACAAGATTT       660
     GAAAACCAAC ATCCAAGAAG AAATTGCCAA CATAACACCT GCTATGCTAA CAAGAGTCAC       720
     GACAAACGCC AGAAATCGGT TTACGCAATG TATGGAGAAT GGGGGACGTC ACCTATCAGA       780
     TTTCATCTTC AAAAAAATAT AAATAAAAAC TTTAGACATG TACCTACATT ATAAAAATAA       840
     ATAAATATTT TCCGATGCCT ACAATAGTTT TCATTGAGTT CTGAAAAAAG GAAATTATGC       900
     TGCCGCACCC TG                                                           912
//
ID   TRANSIB1    standard; DNA; INV; 2167 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063372; transib1.
XX
FT   source          nnnnnnnn:1..2167
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..43
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:2126..2169
FT   SO_feature      CDS ; SO:0000316:544..1926
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 2167 BP; 758 A; 325 C; 364 G; 720 T; 0 other;
     CACACTGGTT TTTTATGTGT TTTTTTTTGG CAGAAAGTCA AAAAAAAATA TTTTAACGGA        60
     ATAAAAAAAT GTATGGTTTC TTTATATTTA GGATAGTCTT ATTAGATAAA AAGTCGATTT       120
     TTACTTTTTT ACGCAAAACT GGCTTATCGT CGACCTCTCA AAGACAGCTG ATTGTCGATA       180
     ACATGCGTAA GACAAAATTG CGGCAAATCA TTTTGCAACA TTTGTGGTTT ATATTTCCTC       240
     AGAGAATTAA AAAAGTTTAA AGTTTTGTCA TGGAAAACAG TAGCACAGGT ATGTAGATTT       300
     GTAGTTCACT AACATTTTTG TGTATGTTAT ATGTTTTTGT GTAGTTGTAT CGTGTTTTGT       360
     TTATGTGCCT TTTTTACAGT CAACTTAACA AATGTAGCTG TGTTTCGTGG AATATAACTT       420
     TTGTATGGGA AACCACTTCA AAAAAATTTT AACGGCAAGT TATTAACTAA CATGTGTATA       480
     ATATTATACA ACTAGTTTCA TATGCTCCTT TTTGTTCCTT TTTGAAAAAA TTACGTTTTT       540
     GTAGATGAAT ACTTGTTTGG GCATGCAGAG CTGCTAGACA TTTGGAGCAA CAATAGTCGC       600
     TCTGAGGATG CAGTTAGGCC GCATATATTT AAAAAAATTG GTCAGAATAA TTTAAATGAA       660
     TGTTGTATTT CATTGTTAAA TAAAAAAGTT AAGTCCTTCT TTGATTACAT AAGGAAACAT       720
     TTGCCAGGTT GCAATAGATC GTTGGACAGG TTGAAGAAAA AACACTTCAA ATGGCTGGCA       780
     TCTAGTATTA GTATAATCGC TGATTGCAAA ACTCCAAAAC TAGTTTATGA AAAGGCTAAT       840
     GACCGACTTA AACGAAAATT AGCTTCGGAC CTTTTCGGAC CTGAAAATAA TACTTCTGTA       900
     CCATTACTCT TGCATGCTGC TTCAGTTTCG TCTAAAAAAG GAAATGAAAA GGACATGGCA       960
     GTTGTATTAA AAGCAGCTGG TAACAGCGAT AATATCAATA ATATAAAAAG AAAAATGTTC      1020
     TCTTCTGAGC CCACACAAAT GTCCGTCGAC AATGCATTAG CCTTTTTATT TGAAAACGGA      1080
     TTTACAAAAA GCCAATACAT CAATTTAAAA CGGAATACAA AAGTACACGG CTTTGATATT      1140
     TACCCATCAT ATCCTGATGT TCTTAATGCT AAACTAAAGC TTAGACCAAA TGGCATCGAG      1200
     TATTTTGAGA ATAAGGCGCA AGTTAAGTTA CAACAACTCT TAAACCACAC AACTTCGCGG      1260
     ATTCTTGAAA TGCAGTATGA AACTTTCAAA GCAAATACCA ACTCGATAGA ATGCCAATTA      1320
     ATATTTAGCT ATGGATATGA TGGATCAACT GGTCAGAGTA TTTATAAGCA ACGTTATGAG      1380
     GAAATCGGTG CTGTATATGA TGGATCGCTG TTTGTTACTA CAATTGTGCC ATTAAAATTA      1440
     GTAGACAATG AACAAAAAAT AATTTGGATC AACAGATCGC CACAATCTAT ACGGTTTTGT      1500
     CGTCCTTTAA AAATTGAATT TATTAAGGAA ACTCGAGAGC TTATATTAGC AGAAAAAGAA      1560
     AACTTGGATA CCCAGACTCG TAATCTGCAC ATATATTTGC ATAAAATAAA CAACATTAAT      1620
     ATATTTGTAA AATATGTCGG TCAAATGACA CTAATAGACG GTAAAGTCTT AAACATATTA      1680
     ACAGGATGTA ACTCTTGCCA ATGTTGCCCG ATTTGCGCAG CAAAGCCAAC GCATTTAATG      1740
     AATGTGAATG ATTTTAATTC AGATATTTTT GATGCTAAAT CTCAAACTCT TCAGTTTGGA      1800
     ATAAGCCCTT TACATGCGTG GATTCGCTTC TTTGAATTTG TTTTAAAACT TGCATACAGA      1860
     GCTGATCTTA AAACTTGGCA TAATTTACAT CTTAATATGA TTTTATTTTA TTTTATTTTC      1920
     TATATATAAT ATCAATAAAA TATTTAATTA AATACAGATA CAAAAATATT TTTTCTTTGG      1980
     TAAGGTAAAT ATTTTTATGG CATATCGGCC AGATCGTTTA TATGGCAGCT ATATGAAAGT      2040
     TGACCAAATC ACTTGAAATT TTGTGAATCA TCTTGGGGGA AGTAAAGAGT AACACAAACC      2100
     AAATTTGGTG AAGATAGGTC ATCATTTCGA ATTTCTGCCA AAAAAAAACA CATAAAAAAC      2160
     CACTGTG                                                                2167
//
ID   TRANSIB3     standard; DNA; INV; 2883 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063370; transib3.
XX
FT   source          nnnnnnnn:1..2883
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..40
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:2571..2610
FT   SO_feature      CDS ; SO:0000316:543..2610
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
XX
SQ   Sequence 2883 BP; 1014 A; 488 C; 511 G; 870 T; 0 other;
     CACACTGGGC CAGATTCCCT TTTTTTTGGC ATAAAGTCAA AAAATTTTGT AAATTGTATT        60
     TTGAATTTAA CTATATATTA TGAAAGAGCA TACATTAGGG ACACCAAAAC GATATTTAAA       120
     AACATTTAAG TTGCAACACT GCATTTTTTA TGCGATATCA AATTCATATG TTTGATCAGC       180
     TGTTTGTTCA AGCAAAATTG GCGCGAAACT TTTACTCAAC TTTGTGATTC TGTTAAAAAT       240
     ACACCACGTG TCCAAATATT TTCAAATAAA ATGGAATATA AAGGTCAAGG TATGCTTAAT       300
     ATAGATATAA CTTACTGATT TAGAATTATG TGTTCCATGT TGTAATTGTT GTTGTCTTTG       360
     TTTACGTCTT AGTTTAGGCA AAATCTAACC AAAGTGTTCG TCTATTGTGG AGTGAGAAAT       420
     GATTTGTGCC AACTTGTGCC AAAAACTAAT AACTGATGTG TTTACTCAAA ACTGTAATTA       480
     AATTGATGTT AGTAACGCCT TTTGCCTAAA TTTGCCTATG CTCTTTATAT TTTGCCTTTT       540
     AAGACAAGTT TGAGATTAGC CGATCGGTTC TGCTGGATGA ATGGATCAAA GGAGATCGAA       600
     ATGACAAAGC CTTAGTTGAC TGGGTTGTTG GCGAATTTAA ATTAAATGAT ATTACTATTG       660
     ACGAGAAAGC TAAAATCGCT AAGCAAATCA GAAGCTTTCA CCTATATATA ATGAAAAATC       720
     TGGCTAAATG TAACCGTACA ATTGAAGCAT TAAAAAAAAA ACATTCCAGT TGGCTTTCAT       780
     CCACGATGAT GGTTGTCGTG GACCAAAACA ACAACCAAGT CGCTTCAGAC TGTCTAATGG       840
     GACGACCTCG ACTCTCTTAC AGTGATGCAG GATCACGGCT CAAAAGAAAA ATAGCAACGG       900
     ATCTGGCTAA TATTGAAGAA AATAATACAA GTCTTCTTGT CCATGCAGCA TCAATTTCAG       960
     CCAAAAAGGA AAAAATGGGC GATACTGCTT TTGTATTAAA GCAAACCATT TCAACTTCAA      1020
     CTGCATCCAC TGAAATTAGA AAGAAATTGA TATTCTCAGA GCCAGTACCG CTCACACCAA      1080
     TTCAGGCTCT TGCATTTTTG ATTGACAGCT CTCTATCCAA AGCAAAATAC AACGACATGA      1140
     GAGCTTTGAA CAAAACACAA TTTAGCAACA TTTATCCATC GTATAATAAA GTCAGAGAAG      1200
     CTAAATTAGC GTGTAGACCT GCGGGAGTTC ATGTGACAGA GACCTTTGCC CAAGTATCTT      1260
     TCCAAAATTT GCTGAATCAT ACGGCCAGTC GAATTATTCT TATGCAAGAG GAGGTTTTTA      1320
     GGTGGCATGA AAACATAACA GGTGTCAAGC TGATGGCAAG CTATGGATTT GACGGTACTA      1380
     CCAGGCAGAT TATGTACAAG CAGAGATTCC TAGAAGATGA ATCCCATTTC AAAGACTCTA      1440
     TTTTCGTTAA TAGCCACATT CCAATAAAAT TAACAGATGA TTTTGAGACA CCTTTATGGA      1500
     TAAATAGAAG CACCCAATCA GTAAGATTTT GCAGACCCCT AAAGATTGAA TTCGCTAAAG      1560
     AAACCAAGGA ACTTATTTTG GAGGAAAAGT CGAATTTGGA GTCACAAATA AAAAATAACG      1620
     TCACAGACTT TACTTACAAT TTTTCAATCG ACAGAAAAAT AGTTACATTT TCCCTTCATC      1680
     TCACATTAAT TGACGGAGAG GGGTTTGAAT ATAATAGCTG GAAAGAAATC TTGCCAGGTG      1740
     TGTCCTATCT GTGGAGACAG TCCAATGGAT TTTATAAAAA CCACCGAAAT ATCAAATATC      1800
     AAGGCTAAAA TTGAAAATCG AAATTATTTC ATCAGTCCTC TGCACGCATG GATCAGATTT      1860
     TTCGAGTTTG TACTCAAAAT CTCATACAAA CTTAATTTGG AAAAGGGGCA AAAGAGGGAT      1920
     AAAGAAGAAA GAGACATGAT AACATCCCGT AAACAAGAGT TACAACAATT ATTTTTTACT      1980
     CAGATGGGAT TACATGTCGA TGAGCCAAAA CGAAACCGAA GTGGAAATAC GAATGACGGA      2040
     AACACCGCAA AAAGAGCATT TAAAAGGACA AGGCAACTTT CATCAATACA AGGATTAAAG      2100
     TATGATATTT TGCACAGGTT TTATATTATT TTGGTTGCTA TGTCTTGTGA ATTTCGTATA      2160
     TATATTTCTA AATTAAAACA ATGTATATGG ATCACTATAA ATGGTATCCG ATGTCAGCAA      2220
     CTTTTCGCAA AGTTTTGATT CACGGTCCGC AGATAATAGC ATCGTCGCTT TTATCTATCG      2280
     GCTGCTGGAG AGAACGCATC TGAAGCACGT AATAAATTCT ACAAGCGTGA TAGACGGTCA      2340
     TATTCGAGAC AAATTTCTCG TGTTAACAAT TTAACGGACG TATTTCACCG ATCCATGGAT      2400
     TCATCGGATC CTTTACTTTC AAGCCTAAAT ATAAACAAAA GATCGTCTCA AAATAAAAAA      2460
     ATCGCTTTGC CGAAAGAAGT CATCAATCTT TTAGATGCAC CAAATGTAGA ACATATTAAT      2520
     AATGAACATT TTTTGGGAAG CGATGATAGC GACTCGGATT CGGATCACGA TGATCCATTT      2580
     TCTATGCATT TGGACGTAGA AAATTTTGAT TAATATAATA GTATAATTAT ATGTATATTA      2640
     AATAGATACA TAAGAAAAAT TCAGCTTAAA TTTATTATAT TAATTAATAA AAAGAAATAA      2700
     TCATGCCAAA TCTACTCCTT AACTTTATAT CCTAATATGG GCGGTATGGG TGGGCGTGGT      2760
     CCGATTTACT TGAAATTTCA CGTACGTATT TTAAATGTCA AATGCACCAA TTCTACAAAA      2820
     ATGCAGCTCT CTAGCTTTAT TATTTGACTT TATGCCAAAA AAAAGGGAAT CTGGCCCAGT      2880
     GTG                                                                    2883
//
ID   TRANSIB2    standard; DNA; INV; 2844 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063371; transib2.
XX
FT   source          nnnnnnnn:1..2844
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..43
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:2801..2844
FT   SO_feature      CDS ; SO:0000316:543..2612
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 2844 BP; 1025 A; 487 C; 507 G; 825 T; 0 other;
     CACTATGGTC CAGAATTCGT TTTTTTTGGC ATAAAGTCTA AATTTTTATG TCAATATATC        60
     GTCCTTTAGC AATTATTTTC TAATAGAAAA TTGATCATAT AAATAAAAAC CAAAAACAAA       120
     ATTGACCGAA AGCTTCACTA AATCGTTTTA TGAGCTTTTA AAGGTGAAGT GTTAAACAGC       180
     TGATTGAGAG AATGCAATTC CCGCCAAATT ATTTGCTTAC TTTTGCACGT GGTACGATCG       240
     TTAATACGCA TCCATAAATT ATAGTAAAAT ATGGAAAATA AATGCCAAGG TATGTTGTTT       300
     TTAACGTATG TAGTTAATAT ATGTGTAGTT GTACTGTTTT TGTGTTGTGT AACATCCAAT       360
     TTATGTGTAT TTTAACAGAA AATTCTAACG TGTCCCCTGT GTTTCGTGGA GTATAACTAA       420
     TTTTCTGACA ATTTCTGACA AAAGTTAAAA ACGTCAGTTT GTACCTTTAA CTATTGTCTT       480
     TGACGGTAAA GTAATATCTT TTGCCCATTT TTGCTCGTTT TCTTAAAATT TGATTTTATA       540
     TAGGCAAGTT CGAGTTCAGA CATAGCGACC TCCTGGACAT TTGGAGGCGT AACAATCGGC       600
     AAATAAGTTA TGTTTCAGAT TACGTTTATT CCGCAATCAA CAACAATAAT CTGGAATCGA       660
     AAAAGACAGA AGAGATTGAC AAAAAAATAG TACATTTTGA ATTATTCATT AAAAGAAAAC       720
     TGCCCGAGTG TAACAGACAA CTAGACCGAT TTATTTCCAA ACATACCAAG TGGATGGCGT       780
     CTAAGATAAC AATTCTTGTT AGTGATTTTG AAAACTCCAA GACACCACAG CAAATGGGAC       840
     GCCGAAACTT ATCTTACCAA AATGCAGGAG AAAGATTAAA AAGGAAACTG GCATCCAATC       900
     TGGCAAGTGA AAGTGATCAC GACACAAGTC TTTTGATTCA TGCAGCAACT GTTTCTGCTA       960
     GAAAAGAATG CAAGAGGGAC GTTGCCTTTG TTCTTAAAGA AACTTTAAAA ACACCAGAAT      1020
     TTCCAAGCGA ATCGAGGATG CAAATTCAAT GGCAAAAACC AACTCCTCTT TCACCAGATG      1080
     AAGCTCTAGC TTATCTCCTG GAAAACACGC TGACAAAACA GCAATATATA AGCACCAGGC      1140
     TTTTAAATAA AAGCCATAAC AGCGACATAT ATCCGCCCTA TAATGAAGTG ATCGAAGCAA      1200
     AATTACAGTG CCGACCAGAG GGTATAGAAG TAATGGAAAA CACTGCTCAA GTGCTATTAC      1260
     AAAATCTCTT GGATCATACA GCGCAAAGAT TAATTAAGTT GCAATCTGAT GTTTTCAAGC      1320
     AATTTCCAGA TATCTTTAAA ATCAAATTAA TTTGCAGCTA CGGATTTGAT GGGACAACTG      1380
     GTCATAGTGC TTACAAGCAG AAATTTGAAA CTGAAGCACT TGGCACACCA ATTTCTGATC      1440
     AATCTTTATT TGTAACTTCT GTCATACCCA TACAAATTAT AGATTCGTTT AATCGGCATA      1500
     TCTGGATAAA CAGAGCACCG CAGTCCATTC GATTTTGCAG GCCTCTAAAA ATTGAGTTGA      1560
     TAAAGGAAAC TGCTGTCCAC ATAATGATGG AAAAAAATCA GTTAGATAAT CAAATTAATA      1620
     ATCTTACGCC ATTCACTTAT AAATGTGATG AAACTCGTGA CATAGAAGTT ACCTATGAAA      1680
     TGCACATGAC ACTTATAGAT GGAAAAGTCC TAAACGTATT AACAGACACT AAATCTACTC      1740
     AATGTTGTCC GATCTGTGGA GTCAGCCCAA CACAAATGTT GAAAATTACA AATTTTAGTT      1800
     CAGAAACCTT TGCACCAAAA GTAAAAGCTT TACAATTCGG GGTAAGTCCA CTACATGCTT      1860
     GGATCCGGTT TTTTGAATTT GTTTTAAACG TATCATACAG AGCCGAGATA AAAAAGTGGC      1920
     ATATAAAAGG AGAGGACAAG GTTAAAATAA GTATTCGAAA AAAATATATC CAGGAGGAAA      1980
     TGTGGAGAGA AATGGGCCTT CGAGTAAGCA TGCCGAAGCA GAATGGCAGC GGCAATAGCA      2040
     ATGATGGTAA TACGGCAAGA AGAGCTTTCG CAAGTACCAA ATTCTCGTCG ATAACCAGCT      2100
     TCAACGAAAA TCTTTTGGAA AAGTTTCACA TTATTTTAAT AGCAATATCG TCCAACTATT      2160
     TTATAAATTC CGACAAATTT CGTTCTTTTT GCGATATAAC TTTTCAATTA TATATCCGAA      2220
     CATATCAATG GTATGGATAT CAAATCAATA ATTCGGCGTT GTTTCCACTT GGATGCCTAG      2280
     GCGAAAATGC GAGTGAAGCC CGGAATAAAC TTTACAAAAG GGACCGACTA TCACATGCAA      2340
     GGAAAAATAG TCGGATCAAT ACGATGAGTG ATATTTTCCA CAGAGCGATT GATTCCTCGG      2400
     ACCCACTATT ATCAACAATA TGTTTAAAAG AAAGAGAGAG AAAAAATAGG AAAAAACCAC      2460
     TTCCGAAGGC AGTAATAAGT CTTTTGGAAA TACAGTCTAG TTTTAAACCT GATCCATCAG      2520
     ACAAAATATT GGATTCACAT TCTGATTCTG ATTCGAGTTC AGATTCGGAA ATTTATAATG      2580
     TAGAACTAGA AGAAGAAGAG GGCGATTATT TTTAAAACAA CAATATACAC ACTTTTATTT      2640
     AAAAAAAAAA AAAAACAATG AAATTTCGTT GACTCCTGAG TCATACCAGT AGTTAATATG      2700
     GGAGGCAAGA GAGGGCGTGG TCGCACAGAC TTCAAATTTT GTGTGCAAAC TATTTGTGGT      2760
     TTAACAACAA AATGTACAAA GTTTCAAGTC TGTAGCTCAA TTTTTAGACT TTATGCCAAA      2820
     AAAATCGAAT TCTGGACCAC AGTG                                             2844
//
ID   GYPSY5     standard; DNA; INV; 7369 BP.
XX
AC   AE003485;
XX
DR   FLYBASE; FBgn0063432; gypsy5.
XX
SY   synonym: nik
XX
FT   source          AE003485:109015..116382
FT   SO_feature      five_prime_LTR ; SO:0000425:1..429
FT   SO_feature      three_prime_LTR ; SO:0000426:6940..7368
FT   SO_feature      CDS ; SO:0000316:708..1865
FT   SO_feature      CDS ; SO:0000316:2156..5344
FT   SO_feature      CDS ; SO:0000316:5374..6612
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
XX
SQ   Sequence 7369 BP; 2822 A; 1461 C; 1232 G; 1854 T; 0 other;
     AGTTACCACA TCTACATCTA CTTCCCCACC CCCTAAACCT CCACGCCAGA ACCATTAGTT        60
     CGTTGGCCCA CATCTGACCA CATCAGCAGT CCACGCCACT ACTTCCCCAC CCCCCTAAAC       120
     CTCCACGCTG AGCCGCTAGT TCGTTGTCCC CTCATGTTGC AACAGTGTAG GCGGAAACAG       180
     CGCAGCAAAA CGGAGGCATT CCCCAAATCC GCTGGGTCAG CAGATTCGCG ACAACACAGA       240
     GCCATACATA ATACTTGATT CTCCTTTGTA ATAAGTCAGT CTTAAGCTAC ACTCGAGGGG       300
     AGTGAGATCA AAATAAAATC ACAACCTTAA AGGGAAATAC CTTTTAATTA AAATCGGGAA       360
     GAAACAATAG AGGGAAAAGA AACACAAAGG ACCACAGAAG GAAGACACTG GAAGGCTTCA       420
     CTCGTTAATT GGCGCAGTCG GAAACTGGAC CTGATGCAGC TCCTTTTCAT CACAATTATT       480
     CAACACGAAT CCATCGTTCA TCATCTGCAA ACAAAAAATA TTCAACACAC AATTAATTAA       540
     GTATACATAA AAACACACAA TTAATTAAGT ATACATAAAA AACACACAAT TAATTAAGTT       600
     CACGTACACA GATATACACT ATTAATTAAA TACATACACT TAATTTTTTT TTTTTTTTTA       660
     CACAATTACA CAGAATTAAG AATTAAAGGA TTTCTCTAAA AGAGTAAATG TCTAAACTTG       720
     CTAAAGTAAA GAAGCTTATT CCGGCGACTA GAAGTAGTAC TCGTTTGAGT GCGAGCTTAT       780
     CAGACGTTAG GGAAGACCAG GTTGCCCTAC CACCCAGAAT TAGACCTTCT TCGAGTAGTG       840
     CACCAAGCAC AATGACTAGT TCGTCAGAGA CAAGTAACTT TTCTTCCCCA CCCCCTCCAA       900
     TTTCCCCTCA GGACATTTGC CTATCCCTAA AAATTCCGGA TGGCATTCGC GACCTTACTC       960
     CCTATGATGG AGATCCAACT ACCCTAAACG AATTTATAAA TAATATCGAG GAAATTCTTC      1020
     TTCTCATTAG AGGCACGGAT AAAACTCCGT ATGGTCAGTT CTTGTTAAGA GCAATAAAAA      1080
     ACAAGATAGA AGGTAAAGCA AAGGCGTTAT TATTATCATT AGGCATAGGC TTAAACTGGG      1140
     ATGACATCAA AGAAGCATTA ATAGGGAAAT TCGCTGACAA AAGAAGCGAA GAAACTCTAA      1200
     ACTTTGAACT TCACGGACTT GTTCACAAGA GATTGCCACT GCAGGAATTT TACGAACGAA      1260
     TTTTAGACAT CCAAGCAACT TACGGTAGAA CCATGGAAAA CATGGGAATA GAAACAGCAG      1320
     CACTAAATCT TAAAAAGGAA TCTTTTGAAA AAACATGCTT GTATACGTTT ATACACGGCA      1380
     TTAAAGGCCC ATTGGGGTCT ACTGTCAGAG CATTTAGACC TAGGAGTCTC CAAGAAGCCT      1440
     ATGATGTGGC AATTAAGGAA AGGGATATTT TTATGAGAGA AAATTGGTCT AGACAAACAC      1500
     AGAGTTCGAG ATCAAACAAT TACAATTATA ATGGGAGAGA TTATCGTAGA AATGACGAAC      1560
     ATCGGGTTGA GAAATATAAT AAGAAATCGG AGTTCGACCG AAACATCAGA TCTAGGGATC      1620
     AAAGAGGAAG TTATTCAAAG CCCAGAGACA ACGACAGAAA TTTTAACAAA ATGAGGGCTA      1680
     TTATGCCAAA AGAAGAGGAC AGAAAACGCT ATGACAGAGA CAATAATTAC TCACGAAATC      1740
     ACGGAAATCC GGGACAGCAA AGACAGACCC TTAACAATAT TGAGACAGCA GGTGTACAGG      1800
     AGTTACATAA TATTGATGAT AAAAATTTTC AATTAAAAGC CTCGTCGGAC AGACGGGATA      1860
     CTTAGAAAAA TTTAAAGTTG GAGGTTCCTT ATTGTACATT TTAATTAACT TCGGTCCAAC      1920
     CAGTCCACTA AAATTTCTAG TGGACACAGG TGCCACTTCT TCCTTCATTA ATCCAGAACT      1980
     TATTGAGGAA CATAACCAAC AAACCCTAAA TACACCAATC TTAATCACAA CAGCACTAGG      2040
     CTCTCATAAA GTAAACAAGA TAGCCAAAAT AAAATTATTT ACTAAACACA ACTGTAACGA      2100
     TACCTTTCCG TTACTTCTCT TCAAATTTCA TAATTATTTT GACGGTCTTA TAGGCATGAA      2160
     CACGTTGAAT AAAATTTTAG GAGTAATAGA TATACCAAGT AAAATCTTAT CAACACCCAA      2220
     ATTCAATTTT GAATTACTGC AGCAAGTAAA ACAAAAAGCT GAATTATTTA ACATAGAAGA      2280
     AGCATCCAAG ATATTGGTAA TGCTACCCGT CACAATTAAG GAGGGTACAT TTTTATTTGA      2340
     AGACCAAAAG GTTTCAGGAA ATTTGTTTAT TACCGGAGGC CTGTACACGG CCCACAACTA      2400
     TTACAGTTGT ATGGAGGTGG TAAACTATTC CAAGAAGCAA GAAAAATTAT ACCTAGAAAC      2460
     ACCAATAGAG GTAAATCACT TTAACACGGA CGAATTCTAT ATAGTAAATG ATATTAAAGA      2520
     CTATGGTACG ATAAACTCCG AAAAGGAAAA AGAAAAGTTC AGTACCCTAA GATTAGAACT      2580
     TTTAAATTCA GAAGAAACAA CGGCGTTCAA AAAATTATGC AAACAATTTC CTAATATATT      2640
     CTACAAAGAA GGAGACAAAT TAACATTCAC TAATAGAGTC AAACATAGCA TTAAAACCAC      2700
     TGACGAAATA CCAGTACACA AAAGACCTTT CAGATACAGT CCTGCAGAAA AAACAGAAAT      2760
     AACCGACCAA ATTAACAAAC TCCTAGAGCA GGACATAATT AGGCACAGCC ATTCACCTTG      2820
     GAGTGCTCCA GTTTTTCTGG TCCCAAAGAA ATTGGACGCT TCAAATAAGA AGAAATGGAG      2880
     ACTGGTTGTA GATTTCAGAC AATTAAATGA CAAGACGATC AAAGATAGAT ACCCAATGCC      2940
     CAACATCAAT GAAATTCTAG ACAAACTAGG GAGAGCTCAG TATTTTTCGG CCCTAGATCT      3000
     AGCAAGTGGT TACCACCAAA TTGAAGTGGA GCCTAAAGAT AGATCGAAAA CAGCCTTTTC      3060
     CGCAGTAGGT GGTCATTTCG AATTCATCCG AATGCCATTC GGCTTATCTA ATGCACCCGC      3120
     AACCTTCCAA AGGGTGATGG ATAATGTCTT GGCAGAATTC AATGGCAAAT TTTGTCTGAT      3180
     TTATCTCGAC GACATAATAG TATTCTCGAC GTCCTTACAA GAACATATCA ACCACCTAAG      3240
     CTCGATCTTC AAAAAACTCA CTCTGGCAAA TTTAAAACTT CAGCCAGATA AATCGGAATT      3300
     CCTCAAGAAG GAATTAGAAT ATCTTGGCCA CATAGTGACC GAAAAAGGCG TTAAACCGAA      3360
     TCCAAAGAAA ATTGAAACTA TTAAAGCCTT CCCTATGCCT AAAACCAGAA AAGAAATTAA      3420
     GTCATTCCTG GGGTTGCTGG GGTACTATAG AAGATTTATC AGAGATTTTG CCAAAATCAC      3480
     TAAACCTCTA ACTCAGCAAC TTAAAGGAAA GTCAGACGTG ACCATCGACG ATAACTATAT      3540
     TAAAACATTT GAATTTTGTA AAACACTCTT ATGTAATGAC CCCATACTAC AGTATCCCGA      3600
     CTTCACTAAA TCGTTTATTT TAACAACAGA TGCTAGTAAT GTAGCAATAG GAGCAGTGTT      3660
     GTCCCAAGGA ACTGTAGGAA ATGATAGACC TATAGCATAT GCAAGTAGGA CACTATCGGA      3720
     GTCCGAAACG CATTATGCCA CCATAAAAAA AGAATTACTG GCAATAGTGT GGGCAGTGAA      3780
     ATATTTTCGA CCATACTTAT TTGGAAACAA ATTTCTACTG GTCACTGATC ACAAGCCTTT      3840
     AGTTTGGTTA AAAAACCTAA AAGAGCCTAA TTCCATGTTA GTGAGATGGA AACTCCAACT      3900
     CTTAGAATAT GACTGTGAAG TCATTTATAA AAAAGGTTCT CAAAACGTGG TGGCAGATGC      3960
     ATTAAGCAGA ATTGTTGTCG AACTCAACAC TAATGAAGCC AGACCAATAA CCTCAGATAC      4020
     AGAAATTTTA ACCTCTAACA GACCAATAAA TGAATTTGCA ATTCAGATCA TATTAAAGAT      4080
     TGCAGATTGT GCAAACGACT TATTGGAAAC ACCTTTTAAA AATAAACTCA GACGAATTAT      4140
     TTCCAGACCT CTGTTCGACG ATCAGACAAT GATAGACGTA TTAAAAACGG CACTAAGATC      4200
     AAATAAGACG CATGCAATTT ATACCACTGA TACAATTTTC GAATCAGTGC AAAAAATTTA      4260
     TGCAGCATTT TTCGCTCCAA GTAAATCATA TAAAATTATA AGGTGTACAA CATATTTAGA      4320
     TGAACTCCGA ACACCAGAAG AACAGGTCGA ATACATATCT GACTACCATA TCAAGAACAA      4380
     CCATAGGGGC ATTGACGAAA CCGTTAGTCA TATTAAACGA CAGATTTATT TCCCCTGTTT      4440
     AAAAGAGAGG GTTTCCCAAC TGATAAACAA ATGCGACATT TGTCAAACCC TCAAATATGA      4500
     TAGACAACCT CAGAAACCAA TATTTCAGCT AACAGAAACA CCTAATAAAC CACTAGACAT      4560
     TGTACACATA GATCTATACT CAATTAACAA TAAAACCATT TTAACAATAA TAGACAAATT      4620
     TTCAAAATTT GCAGAAGGTT ACACTATTCC ATCTCGAGAT TCCATTAACA TCACTAAACA      4680
     TATGATGTTC TTCTTCAAGA CCCATGGTAT TCCCAAAACA ATAGTTTGCG ATCAAGGCCC      4740
     CGAATTTGCA GGAATTATTT TCAAAGAATT GTGTAATCAA TACAATATAA CTTTACATGT      4800
     AACATCTTTT CAACAATCAA GTAGTAATGC CCCAGTTGAA AGATTACATT CATCGTTGAC      4860
     GGAAATTTAT AGGATAATTT TCGAAAAGAA AAAGGCATTA AAACTCAACC TAGACCATGA      4920
     TTGTATCCTA ACAGAAACAT TTATAACGTA CAACAACGCC ATACACTCGT CTACAAAATT      4980
     GACTCCATAT GAAGTTTTTA CAGGACGAAC CCATATTTTC GAACAAAATT ATAAGGCAGT      5040
     CAGTCAACAA GACTACATGA GGGAACTGGA AAGTTATAAG AACAACTTAT ATGTAGAAGT      5100
     AAAGGAAGAA TTTGAAAGTC AAAAACTCAA CAAAATTCTA AAACTAAATG AGGACAGAGT      5160
     ATTACCAATA GCGGTACAGG AAGGAGATAC TGTTTTTAGA AAGGAAAATA GGAGAAATAA      5220
     GCTAACACCC AGATTTACCC AACACAAAGT AGCTGATGAT AACGGGGTAA CCTTTACAAC      5280
     GAACAAAAGA CAGAAAATAC ATAAATCAAA AATTAAAAAA AGAATCAGAC AAAATAGTAG      5340
     ATAAATATAT AATAATATCA TTTCAGGTTA TACATGACAG CAGCTCAACT GCTCCATGTT      5400
     CAACATGTTA AGGAAAATAC CCCCCTAGCA GAGATCAAAC TGGGAGAAGC AAGGACCATT      5460
     AAAACATATA GTTCAGTGGC CCATGTAATA GAACTAACGG AGTTAAAAAA TAATTTGAAT      5520
     AAATTAGAAT CAAGTCTACA AAATTTACAA GATGAAGACT CTAATGATTC AATAACACCC      5580
     ATACAAAGAA AGATAGACCA AGCAAGAGAA AAGATCTATT CCTTGACCCC AAACCGAAGA      5640
     GAAAAGAGAG GCTTAATAGA CGGTCTAGGT AATGTTATAA AGAAAGTAAC TGGGAACATG      5700
     GACGCAGAGG ACGCAGCTAA AATCGAGACA AAATTTAAGC AAGTATTTGA AAATGAAGAA      5760
     AACATTAACA AGAACCTCGG GCAACAAATT TCTTATAACA ACGACATAAT CGTAAATTTT      5820
     AATAATATGT CTGATCATTT TTATAAAGAA CAGGAGAAAA TTGAGAGGTA CATTAATAAC      5880
     TTTAAAAATG GCATTTCTAA GGAATTAATA GTAGAAGATA AGAAAATTAG AATTTTACAA      5940
     ATATTGAATA TAATAAATAA TAATATAGAT ATTCTCCAAA ACCACATACA TGATATAGCT      6000
     GAAAGTATAC TATTGGCTAA ATTCAAAATA ATTCCCAATT TTATTTTACC TATACAAGAA      6060
     TTGAAAGATA TTGCACAGAT TTTTAAACTT CAAAATTTTT CTATTAATTC AGAAGAGCAT      6120
     ATTTACAGAC TACTCAACAT AGAGATAGAA TCCAAAAAAA CAAAAATAAT ATTTCATATA      6180
     AAGATTCCAA TATTTGATAA GTACACTTAC ACACTTTCTC ACCTAATTAA ATTACCTATC      6240
     AATGGCACGA ATTTTCTCAC TCTACCCAAA TATATATTGT ACGATGATAA ATTTAATTAT      6300
     ATGTTAAGTT TTCAAGAAAA ATGTTCAAGA ATACATGGCA CTTACATCTG CGACCCCGGA      6360
     ACTGCGGAAA GTAACATGGC CAACAGGGAG TGCGTGAAAC AAGTGCTACA AGGAATGAAC      6420
     CCTGTTTGCG AGGCAAAGAT TATCAACACG GACGAGGCGG TAGTAGAACC GGAACAACAG      6480
     TGGATTGTCA TTATCAGCAA GAATCAACTA AGGGCTGAAC CAAGTTGTGC TGAACCGTTC      6540
     ACTATTGAGG GAACGACGGA TTATCAATCA CATAAACTGT TCCATATTTA TAGACGGTAC      6600
     CAAATACGAT GACAGCGAAT TGTTCTACCA AGAAAGGATT AAATTATCAC TACCAAGTAA      6660
     CGAAGAACAT ATCTATAAAT GCAACATCGG AGGATTTAAG CCTAAGCAAA ATAGTACTGC      6720
     ATCTTCAAGA GAATAAAGCT AAAATATTCC AAGTCAAGGA ATCTACGGAT TAACCTTCGA      6780
     TTCATAACCT ACGGCATCAA GTATCATCCT GGTCATATTT ATACTGTATG CTTTAGCAGT      6840
     AAGGAGAAAC ACTACTTACC TGCCCAACCC TGTTACCTCA GTCAACTACG TTCCGTCTAT      6900
     TCCTTCGTTA TGGCCGTCAC TTTATTCAAG GGGGGGAGGA GTTACCACAT CTACATCTAC      6960
     TTCCCCACCC CCTAAACCTC CACGCCAGAA CCATTAGTTC GTTGGCCCAC ATCTGACCAC      7020
     ATCAGCAGTC CACGCCACTA CTTCCCCACC CCCCTAAACC TCCACGCTGA GCCGCTAGTT      7080
     CGTTGTCCCC TCATGTTGCA ACAGTGTAGG CGGAAACAGC GCAGCAAAAC GGAGGCATTC      7140
     CCCAAATCCG CTGGGTCAGC AGATTCGCGA CAACACAGAG CCATACATAA TACTTGATTC      7200
     TCCTTTGTAA TAAGTCAGTC TTAAGCTACA CTCGAGGGGA GTGAGATCAA AATAAAATCA      7260
     CAACCTTAAA GGGAAATACC TTTTAATTAA AATCGGGAAG AAACAATAGA GGGAAAAGAA      7320
     ACACAAAGGA CCACAGAAGG AAGACACTGG AAGGCTTCAC TCGTTAATT                  7369
//
ID   GYPSY6    standard; DNA; INV; 7826 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063431; gypsy6.
XX
FT   source          nnnnnnnn:1..7826
FT   SO_feature      five_prime_LTR ; SO:0000425:1..407
FT   SO_feature      three_prime_LTR ; SO:0000426:7419..7826
FT   SO_feature      CDS ; SO:0000316:1026..2003
FT   SO_feature      CDS ; SO:0000316:2277..5315
FT   SO_feature      CDS ; SO:0000316:556..7012
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
XX
SQ   Sequence 7826 BP; 2274 A; 1929 C; 1744 G; 1879 T; 0 other;
     AGTTAACTAA GTTAACCGGG CGACGGCTAC GACCGATCGT CCGAAGACTC GCTCCGGCCA        60
     AATTGCTGAC ACAGCGTCTG GCCGGAAGCC CGTGCATAGC CGGCAAACAC TACCCATTGG       120
     AGTGGCCGCT ATGAGTTTCA TATTTTGTTA GCCTTAAGTT CAGTTTGATT TTATATTCAA       180
     TAAAGAGCGC ATCGCGCCTT GAATCGACTC CAGCTTTTGC TGTCATTATT AAATTGGTTG       240
     GTTGGTTGAC TAGCCTTAAG GGCACTCAAC AACGGAGAGA CGTTCTCCCA CCATATCTTC       300
     TAATTCTGAG GAGAAGAGGT CTGCGGCAAC CGCCCTGCCT CCCGGATACC TGCAACCTAC       360
     GCCGGAGACC GCGGCGAGGG ATCTACACCA ACATAATTAG TTTAATTGGC GCTCAACTAG       420
     CGGGAAGTAC GCACCCGCCC ACATCATACA GAACATGTAC ATCTTCGACA CAAACCATAG       480
     TTTCAGACCA GTGTTAAAAT ATTAAATAAA CCAGTCTGAA GAGTGTTTTT AAAATCTCAA       540
     TATTGAATGT GACGGCTAAT AGGTGTTTGG TGTTTATTTT CACTGCGAAA AAAATTTAAT       600
     TAACATCATA ATCCGTTGCA AACACGGCAA AAAAAAAAAA AAAAAAAAAA ATAGCCTAAT       660
     TTAATTCGCT CACAGTTGTG TTACGGCGCA TTGCTATTTC GCCGAGCAGT TAAATTTTTT       720
     TTTTTGCAAA TATTTTTGGT GAGGAAATTA ACATATTGCG GGGGCTAAAT ATCAGAGCCA       780
     AGGCTCTAAC AGTTTAATAT ACCAGATTTG AATTTTTTAT TTGACATTTA ATTCAGTTTT       840
     GTATACTTGG TATTAGCTTA ACAGTCCATT TTGTATCTTT TATTGTCCCC ACTCCACCGC       900
     TGTGAACCCG ATACGGCCGC GCATGCATTT GTATTTCAAT TATTTATTCT TCGCTTCTTT       960
     GTTTATAGTG GCGGAAGCTC AGCTCCCACC CACCCCTTAC CTTGCCGCTG CTCCGCGAGG      1020
     TGACGGCTTG GTTCGAACAG CTTTATACAT CGTTGCAAAG GCGGCGGCTA CAGTCCCCGC      1080
     GCACCCCTCA CCCTACCGGT GCTTCTTTGT TTATCGTGGC GGAGGCTCAG TCCCCGCGCA      1140
     CCCCTCACCA TACCAGTGTT GGCACTTGGA AAGGCGGCAA CTGGGCTCAC ATACATAGTT      1200
     GTTAAGGCGG CGGCTCCGTC TCCGCGTACT TCTTGCGTTG CCAGCTGCCT TCGTGGGCAA      1260
     AATAGCTGAG CGGGCATTGC ATACCAGTGC AGTTTAACCT TAAGCGCATA TGTGCTCCCC      1320
     GTTTACACAA TATAGGGAAC ATAAACCTAG CGACTCAGAT TCTGACAGTG AAGGGCCCCC      1380
     GCGTATTTTC ATCCCAATAC GGGCACCCAC CAACCCCCCT TCAGGTAGAA CCATGGACTC      1440
     AGATCAGCTT AAGGCTGTGA TTCAGACCGC CGTTAATCGT GCCTTGGCAG AAGCAGCCGG      1500
     TGAAGCCAGG CGTAGAGAAG AAGAAATGCG CCAAGTTATA CAACAGTTGG CTACCCAAGT      1560
     TGCAGCGGTG CAAATCGCAC CCACACAAGC GGCAGTCCCT ATAATCAAAG TATACCAACC      1620
     CATTGATATC ACGGGCAACG TCGAGTGCAG CGAGCCTCTG GATGCCGTAA AATGCTTGCC      1680
     CGAATTTACG GGAGCACAAG AGACATATGT CTCCTGGCGG CAGGCGGCGG TAGCCGCATA      1740
     TTACATATTT AGGAATTATG TAAATAGCTC ACGCCACTAC CAGGCGGTCG TTATAATCAG      1800
     AAGTAAAATA AGAGGCCCCG CCGATGCGGT GCTATCTTCG TTCGGCACTG TATTGAATTT      1860
     CGATGCGATC ATAGATCGCC TCGATTTCAC ATATAGTGAC AAACGCGCGA TTCACGTCAT      1920
     CGAGCAGGAA ATGGGCACCC TCAGACAGGG AAGCCTGACT CTATTACAAT ACTACGACGA      1980
     GGTCGAGAAA AAGCTCACCT TGCTTACCAA TAAGGCCACC ATGTCGTATG AAACGGCGGC      2040
     GGCAAAAATC TTATGCGACA AATTCCGGGA TGATGCGCTC CGTATATTTA TTTCGGGACT      2100
     CAAGCGCAGT CTTTCCGATG TCCTCTTCTC GGCGAAGCCG AAGGACATGT CAACTGCGTT      2160
     GGCATTAGCT CAGGAAGTGG AATCAAACCA CGAAAGGTAC ACAGTCGCAA CATCGTTTGC      2220
     AAAAAGCCTG GAGGATAGGG ATAGGAAGCA ATACCCAATG GCGCAAGAAC GCCAACAAAC      2280
     GCCCTACCAA GCGCACTCCC AAGTAAGCAG GGGAAAAAAC CCACACTTTA TTAAACAGGT      2340
     TAAGGCTCAG GTACACTCGG CTCCGCATAA CGACAGGCGT CGTGAAAACA CATCAGAACC      2400
     CATTGGAGGT TGACCCGTCT ATGTCCAGGT TGAGACAACC CACTCAGGCC TACCAAAACG      2460
     GGAAGCCCGC CCACTCCGGT CGTTCACACC CTCACAAGAG ACAGAGGGTT AATCACATCG      2520
     CTCAGACCAT AGGTCAGGCC GAAGGCACGT ACGCAACCAC AGCGTCCAGC GCGGCGGCCA      2580
     AAGTGGATGA CGACACCATT TCTGAATATG ATTTAGAAGT GATTAATTTT TTAGGGGAAA      2640
     ATCCCTGCTG CCCGTCATCA GACGAAGAGT AGCGGGGAAA GAGATGAAGT TCCTCATCGA      2700
     CACGGGTGCG TCAAAAAATT TTATCCGGCC TCACAAAGGC TTAAAAGGCG TTCGCCCCGT      2760
     CGATTCCCCA TTCACCATCC ATTCACTCCA TGGCGTTACC ACGATCACGA AAAAATGCTT      2820
     CGTGTCACTT TTTGATTGGA AGGCCACGTT CTTCATTTTA CCTGATTTGT CCTCCTTTGA      2880
     CGCGATAATT GGCCTCGACC TACTTAAACA GGCAGGGGCA TCGCTTTGTC TGGCCTCTGG      2940
     CCACCTCAGA TGGGGCAATG GAGAAGAGAA AATTGAATTC CACCCATGCC CCGACGTCAA      3000
     TTTTACCGAA GTGGACTGCT CAGATGCGCC ACCCTTGGTC AGAAACGCGT TCTTAGAAAT      3060
     GCTGAAGACT AGGAAGAAGG CTTTTGCAAA CCCTAACGAG GCTTTGCCCT ATAACAGATC      3120
     GGTGGTAGCT ACCATCCGAA CAGTTAGTGA GGAGCCCATA TACGCAAAGT TATACCCGTA      3180
     CCCGATGGGG ACGGCGGACT TCGTCAATAA AGAGATTGAA GACCTGCTTA AAAACGGGAT      3240
     AATTCAGAAG TCGGTATCCC CTTACAACAA CCCGATATGG GTTGTATATA AGAAAGGGAC      3300
     CGATGACCAT GGCAACCGGA AAATGAGACT AGTTATCGAC TTCCGCAAGC TAAACGAAAG      3360
     AACAGTGCCC GATAAATATC CCATGCCAAA TATTAACATG ATATTGAGCA ACCTAGGCAA      3420
     TGCGAAGTAT TTCTCCACGC TGGACCTCAA GTCTGGCTAT CACCAAATCA TTCTTGCAGA      3480
     ACGCGACAGG GAAAAAACCT CTTTTTCTGT GAATGGGGGA AAATACGAAT TTCGCAGATT      3540
     ACCGTTTGGC CTCAAAAATG CAGGTAGCAT TTTCCAGAGG ACAATCGATG ACATCCTACG      3600
     GGAACAAATC GGCAAGTTCT GCTATGTTTA CGTTGACGAC GTAATTATCT ACTCCGAAGA      3660
     CGAAAACTCT CACATCAAGC ACGTAGATTG GGTTCTAAAG AGCCTGCACG ATGCGAACAT      3720
     GAGAGTATCG GCAGAAAAGT CCAGCTTTTT TAAGAAAAGT GTGAGCTTCC TTGGGTTTAT      3780
     AGTCACTTGT AACGGTGCTA CAACAGACCC AGAAAAGGTT AAGGCTATAA AAGAATTTCC      3840
     GGAACCCAAA AGTGTTTTTG AGGTACGGTC ATTTCTAGGC CTAGCCAGCT ACTACAGATG      3900
     TTTTATTAAG GACTTCGCGG CAATAGCAAG GCCTATATCA GACATCCTAA AAGGGGAAAA      3960
     CGGAACAGTT AGTAGACACA GGTCACGAAA CATTCCGGTT CAGTTCTCGG AGACGCAGCA      4020
     ACAAGCGTTC CAGAAACTAC GAAACATCTT GGCATCCGAC GACGTGATGC TAAGGTACCC      4080
     CGACTACAAA AAGGCATTTG ATCTAACGAC AGATGCCTCG GCCCATGGCA TTGGCGCAGT      4140
     ATTGTCCCAA GAGGGACGCC CAATAACAAT GATCTCAAGG ACATTGAAGG ACAGGGAGGT      4200
     TAACTACGCC ACCAATGAGA GGGAACTCTT AGCCATAGTC TGGGCTTTGG CCAAGCTACG      4260
     GCATTACCTG TATGCGGTTA AAGACATCAA CATCTTTACC GACCACCAGC CGCTAACCTT      4320
     TGCAGTATCG GAATCCAATC CGAATGCAAA GATTAAAAGG TGGAAAGCGC GCATTGATGA      4380
     ATCAGGAGCG CGTATTTTCT ACAAACCCGG CAAAGAAAAC TTGGTCGCCG ATGCATTGTC      4440
     ACGGCAACAA ATTAACGTCA TGGAGGAGCA AGAAGCTCAA TCGTGCGTGG CCACTGTTCA      4500
     CAGCGAACTC TCCTTGACGC ACACTATCGA AACGACGGAT AAGCCCCTAA ACTGCTTTCA      4560
     GAACCAGATA ACTCTGGAGG AGGCACGCTT TCCGTTAAAG CGCAGCTTCG TCCTCTTTGG      4620
     AAACAAGAGG CGGCATGCGA TTAACTTCCC CTGCAAAGAG TCATTGATTG ATGAACTCGC      4680
     AGATGTAATC GTTCCGAAGG GCGTAAACGC CATTCATTGT GACCTGCACA CGCTGGCACT      4740
     AATACAGGAC GAGTTGGTTC GGAGATTTCC AGCCACCAAA TTTTGGCACT GCAAAAACCG      4800
     TGTAACGGAT ATTTTTGCAG TCCCTGAAAG ACGGGAAATT CTTACCGTAG AACACAATAG      4860
     GGCCCACAGG TCGGCCCAAG AAAACGTTAA GCAGGTACTC TCCGAGTACT ACTTTCCGAA      4920
     GATGACCAAG TTGGCTACCG AAATCGTAGC AAACTGCAAA ACATGCGCAA AAGCCAAATA      4980
     CGATAGGCAC CCAAAACAAC ATGAGCTAGG CGAGACTCCA ATCCCCTCTC ATGTGGGAGA      5040
     ACTACTGCAC ATCGACATTT TTTCTACGGA TAAAAAGTAT TTTCTCACTT GCATTGACAA      5100
     GTTTTCGAAG TTCGCAATTG TGCAACATGT CCACTCTAGG ACAATCGAAG ACCTTAAACC      5160
     GGCCATACTA CAGATTATGA ATTTTTTCCC TAGGGCTAGA GTAGTTTACT GCGATAATGA      5220
     ACCTTCATTA AATTCGCATA CTATCTCGAC CATGCTTGAC AATCACTTTG GCGTTAGCAT      5280
     TGCCAATGCA CCGCCACTCC ATAGCGTGTC AAATGGGCAA GTGGAGCGCT TTCATAGCAC      5340
     CCTTTTGGAG CTTGCTCGTT GCCTAAAAAT CGACAAGGGC ATAACCGATA CTGTGGAAAT      5400
     TATTTTGTTG GCAACCGCCA AGTATAATGA GTCAATTCAC TCCGTCGTTG ACAAACGACC      5460
     AGTTGACATC GTGCAGGAGC ACCCAGATGA CCCACAGACG GAAGTCCGGA ACAGAATCAT      5520
     TAAGGCACAA AACACGCTCA GGACCAGGGA AAACGCCTCC CGACAACACA GAGTATTCGA      5580
     AGTCGGCGAG AAGGTATTGG TTAAATCCAA TAGAAGGCTG GGAAATAAAC TCACACCATT      5640
     GTACGAGGAG AGAGCCGTAG AAGCGGACCT GGGGACCACG GTCCTCATCA AGGGGAGGGT      5700
     GGTCCACAAG GACAATCTTC AATGATATGA CCAACAATAT CCTTTATGGT TTTTTTTATT      5760
     ATTCATTTTT TATATTATAT TTTTTATCAC ACCTTCAAGC CATCTGGCGC ACTTTATTTT      5820
     TTATATTCAT TAGTTATTAC ACCTTCAAGC CGCTTGGCGC ACTTTGTTTT TTACTATAGG      5880
     TTCGTAGCCA CTGGCATAGT TTGTTTTAAG TTCATTTTAT CGGTGGTGGG AAAACCCTCT      5940
     ATAAGCATAA AAATAGCTAA AGCTTAATTT CACAGGATCG GACCAACATT TTGCATACTC      6000
     CTGCCCTTGG CGTCGGCCCA CGTTACCGAT TATTCACAGG CCAGGTACAT CCCCGTTATA      6060
     GATGGCGAAA TCCTAGTATG GGAGGAGTTT GCTTACGTCA CGCACACAGC AAACCTCTCA      6120
     GAATATGGGC GTGTAATAGA GGAGACAACC AACATGATAG ACATGTTTCC GCTATCCCAT      6180
     ATGAAGAAGC TTCTGAGCGT GGATACCGCC CACCTCCAGG ACTTGTTAGA GTCGTTGGGC      6240
     GTTCATCACA GAGTAGCTAG GAGCTTGGAT TTCTTAGGAC CTATGCTAAA GGTTGTAGCA      6300
     GGGACACCAG ATTCCAGCGA CTTAGAAAAA ATCAGGTTTA CCGAAATGAG GTTAGTCGAG      6360
     TCTAGCAATA GACAGATCCA AATTAACACC AAAACCCAAA ATCAAATTAA TCAACTTACC      6420
     TCTACCGTCA ATTCAATTTT GAGATCAGCC AAAACCTCAC AAATAGACAC TGGACACTTA      6480
     TATGAAACAC TGCTTGCTAG AAACCGCATG TTTATGGCGG AATTACAAAA TTTAATGCTT      6540
     GCAATAACCC TAGCCAGGAT TAACATTGTT AGTCCGAACA TTTTAGATCA CGAAGACTTA      6600
     GAAACAGTTT GGCTTGAGGA ACCCACCGAC ACACCTATAG GAGATCTTTT GTCCGTCTCG      6660
     TCTGTAAAGG TTTTACAGTC CCGTAACATT TTACACTTTA TCATTAAATT CCCCAAAATT      6720
     AAATTAGCCT GCAAGAAGAT CACTATTTTC CCAGTTGCCC ATGGTGGAAC GATGTTGCAG      6780
     ATCATAGACA ATGTCATAGC CGAATGCAGC GGAGAAGTTT ACGCCATCAA AAACTGCTCC      6840
     GAATCACCGA GAGCCACATT CTGCCGCCTA GCTTCAGAGA GTTCGTGCGC CAAAGACCTG      6900
     CACGCCGGTG GGGTAGCACA CTGCCGAGTA CAAGAGAGTG ACCTGCATCC GATAACCTAC      6960
     GTAGACGAAG GAATTATTAT CATCAACGAT AGGTCGGCCA AAGTGCGAGT GGACAACGGC      7020
     ACAGAAATCT GGACTCATGG CACACACCTC ATAACCTTTG ACAAACAGGC CACCATAAAT      7080
     GACACACTCT TCATCAACCA CAATAACACC CAGAAGAGAG CTCCAGGGAC AGCAAGTCTT      7140
     CCCTTGTTGA ACATCACCGC CACCCAAGAT GTCCTCAGCC TCCCGTATCT TCACCGTCTG      7200
     AGTGAACGAA ACTTGGAGTT CATTAAGGAG TTCAGAGAAG AGATTGAGAA CCAAAGAACA      7260
     CGTCTCGTAG CAATTATTGC AGGAGCAATA TGCTGCGCAC TCATCTGCAT CGGGCTTATT      7320
     TTTAGGCGTT TCACTGAGGC AAGAAAATCC GCAGGCCAAG TTAGGCAGAT TATCGCTGAA      7380
     CTACAGACGG CCGAGGGCGG CCTTAATTCT GAGGGGGGAA GTTAACTAAG TTAACCGGGC      7440
     GACGGCTACG ACCGATCGTC CGAAGACTCG CTCCGGCCAA ATTGCTGACA CAGCGTCTGG      7500
     CCGGAAGCCC GTGCATAGCC GGCAAACACT ACCCATTGGA GTGGCCGCTA TGAGTTTCAT      7560
     ATTTTGTTAG CCTTAAGTTC AGTTTGATTT TATATTCAAT AAAGAGCGCA TCGCGCCTTG      7620
     AATCGACTCC AGCTTTTGCT GTCATTATTA AATTGGTTGG TTGGTTGACT AGCCTTAAGG      7680
     GCACTCAACA ACGGAGAGAC GTTCTCCCAC CATATCTTCT AATTCTGAGG AGAAGAGGTC      7740
     TGCGGCAACC GCCCTGCCTC CCGGATACCT GCAACCTACG CCGGAGACCG CGGCGAGGGA      7800
     TCTACACCAA CATAATTAGT TTAATT                                           7826
//
ID   INVADER5    standard; DNA; INV; 4038 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063426; invader5.
XX
FT   source          nnnnnnnn:1..4038
FT   SO_feature      five_prime_LTR ; SO:0000425:1..352
FT   SO_feature      three_prime_LTR ; SO:0000426:3686..4038
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 4038 BP; 1204 A; 692 C; 934 G; 1208 T; 0 other;
     TGTCGTATAT TCCTTTTTAA TTTCAAATTA TAACGTACAT TTTATATTTG CTAAAAGCTG        60
     GGCATATTGT TTTGTTTGGG TATTTCTTCT GTATTCATAA AGCGAGGCAG AAATAGTTTC       120
     TGTCAACGCA GTCTGGCATG GGCATGAATG GGACGGATAG AGTCCGGTAA AACTCACCAC       180
     AGTGTGTCTG TGTAGTGGTG TATGAAAGAG AATGAGAAAG GGAAACGCTT GGTTTTGGTC       240
     ATTCTTGGTG ATGAAATAAA GAGGGATAGT CATGCCACGT GCCAGAAAGC GTTTCGTTGA       300
     GGAAACAGAG GAAGACTCTT GTAACGAGGA GTCTACAGAC CTTGGATCGA CATCAGAAGT       360
     GGGATCTTCC AAGCCTCACA ACTGTGGAGA CAACCTGCGA ACACTCTTGG AGTCGCAAAA       420
     TCACACCTTT GCGGAACTCT TACAGGCTAT GCAGCGAACG CAAAGAGTGC CAAATGACGC       480
     AGTAGCTGTA GTGCTTCCAA AATTTAACCC CGATCGCACT GGTTCAGACG GAGCATCATG       540
     GTGTTCAACA GTGGATTATA TTCTATCTGA AAATCAACTA CATGGCACCT TTCTCGTTAT       600
     GGCTTTCAGC AAGGCGCTGG AGGGAAGCGT GTCTCATTGG TTATCCCAAA CATGCTTTCC       660
     GGGAATCACA TGGATGCAGT TTCGGGAGTT GTTTTTGCAA AATTATGCAG GAACTGAGAC       720
     ATTGGCCGCA ACAGTTATAA ATCTGCTGGA TGGACGCCCA AAAGAAGGAG AGTGCTTATC       780
     GTTGTATGGG AGCAGGATGG TTACTTCTCT CGTGTCCAGG TGGAAGTCAC TGGATGTGGA       840
     ACAAATTGCA GTTTCGGTTG TGCTGGCGCA TGCAGCTGGT TTTAATAAGC GATTACGGCG       900
     TCTAGCTTTT ACGACAGATG TGAACACTCG GAACGATCTG CATCAGGAAT TAACAGCCTA       960
     TTCTTTTGAT GCCCGACAAA GTCAATCTTC ATATGGTACC ACGTCAGCAC CATCAGCGAA      1020
     AAGAGTCAAG ACATTCTCTT CCGGAAAACT TGGTCATAAA CAGGCGGAGT GTCGTTTAAA      1080
     GAAGGAAGCA ACTCAAAGCC ATCATTCTGC TGGTCAACGT TCTGGCTATA CTGAAAGTAA      1140
     GCGCCGGTCC ACCTTGACCT GTTTTAAATC TGGAAAAGTT GGACATGTGG CCAGCGTGTG      1200
     ACCGGATCGT GAGGAGCGTC AATATATGCA CAATACTGGA GCCTGTGGAA ACGCTGAAGT      1260
     CCAGTTCATC TCCGTTTGCG AGTCCAATAC TACATCCAAA TTCAATCGAG ATAACAGCAT      1320
     TCGTGACTCC AGAGGGACAA TATGCATTTT TGGCAATGCC TTTTCGGTTT AAAAATGCCA      1380
     CTTCTGTTTT CTATGAGCGA TAAATTGTGC TTTAGGTGAT CTTAACCATA AATACGTCAT      1440
     TGTTTATATG GACGATGTAC TTATAGCTGC CAGCACTAAG GAAGAAGCTT TCGATAGATT      1500
     ACAGGTAGTT TTGCAAACAC TTATTACTGT CGGATTTTCT TTCAATATGT TCAAATGCTC      1560
     TTTTCTTAAA TCTCGTATTG AGTATTTGGG TTTTGGAGTT GAAGCAGGTG AGGTGCGTCC      1620
     AAATCCTGGA AAAATACATG CTCTTGTTAA TCTGCCGCCT CGCAAACTGT GACACAATTG      1680
     AGACAGTTTA TTCGGCTAGC TTCGTACTTT CGCGAGTTTG TGCCCAAGTT CTCGCAATTG      1740
     CTAAAACCCC TTCATGCTTT TACATCAAAG GCCATATCAT TTGCATGGAA TAGAGAGCAC      1800
     GAGCAAATAC GAAAGAAAGT AGTTACAAAA TTTGACTTAT GAACCTGTTC TTATAATATT      1860
     TGATTCACAG TTTCCTATTG AGCTTCACAC AGATGCCAGT GCAGACGGCT ATGGAGCTAT      1920
     TTTGTTACAC AAAATAGAAA CCAAGCCTCG TGTTATTGGG TATTTCAGTA AACGGATGTC      1980
     TCCCGCAGAA TCTCCGTTAT CATTCATACG AGTTGGAGAC GTTGGCGACA TTGTAAAATT      2040
     GTAATTGTAA TTGTAATTCA CCTAAAGCTT CCCATACTAA AGTCGAGTTG ACTCCTAGGG      2100
     TCCATCGCTG GTAGTCTTAC AAGCAGACCT TCGATTTTGA TGTAGAATAT AGACCAGGTA      2160
     CACGTATGGC TCACGTTTAG TTTCTTTTCC GAAATCGTAT ACCTGAATAC CTGATATAGT      2220
     TGAAAAACAC ATTAATTTGA CAGAGATATT TGACAATTGG TTACTAGCCG TACAGCAAAA      2280
     AGATGGACAG ATATTGTTTC TAAGTTGCGT AATAATGAAC TTAGTGAGGA ATTGGCTAAA      2340
     AAATACGAGT TGCGGTCAGG AATATTATAT CGAAAGATTC AAAGGAACGG GAAAACCCCT      2400
     TGCCTTCCTA TTATACCAAA GTCGTTTATG TTAATAATGT ACATACATGA AGCCATTATG      2460
     CATCTTGGTT GGAAGAGAAC CCTTAAAAAA ATGTATGAGT ACTATTGGTT TGAGAAAATG      2520
     TCGAAATATG TTTGTAAATT TGTAGACAAC TGCATCACTT GTAGGCTGTC GAAACTATCA      2580
     TCTGGCAAAA TACTACCATT ATTTGGTGTC CTTCTCGTTT AGTTGCTGAT CAAGAGATTT      2640
     TTGCTCTGCT CAAATTTTTG CTCTTGCAAA TGGTCAGGTG GAGCGTGTTA TGATTAACTG      2700
     TAGCTTAAAC AGGCCAGGGG TGTTGGCAGG ACTCTTTGGT TGACGTTCAA TTGGCTCTTA      2760
     ATTGCACGCC CAACATGGTG AATAAAGTAA GCCCATTAGA GTTACTCATT GGTAAAGAAG      2820
     CGAGACCATT TGTACCTGTT GTGGAAAATT AACTACTTTT CATGTCCTCG TAGTAAGAGC      2880
     AATGGAAAAA CTTAACATGG AAAAGATAAA ATTAGATTTG ACAGAAATGA AGTAAAATGA      2940
     AGTCGGGGAC TACGTACTAC TTAAGTATGA AGAGCGTCAT CAAACTTAAT TAGATGCCAA      3000
     ATTTAGAGGT CCATTCTTGG TAGTTGAAAC ATTACAGGGT GATCGGTATA AACTAAAAGC      3060
     TTTGAATAAT AATCGCACAT ATAAATATTC CCATGAATTT TTACAAAAAA TGTCTGAGAC      3120
     CGGGATTGCC AGAAAGTTTG AAGATGATCA AGGTGATCAT AAAGATGGTC CAGGTCGAGC      3180
     CAGTGAGGGC TGCGACATTG AAATTGAATA ATAAGATAAT TTTCGGATAG TACGGCTCTC      3240
     TGCACATATG GGTGCCCAAG TTATGTGGTT CGCCATTTGT CGTAGTTGAG TTGGAATCTC      3300
     GAAAGTGATC GGAAGTATTA AGTTACTACT TGGCCGGTAT AATATTAACT TTGTGCTATT      3360
     TAAGTTGGCC GGTTTAGTGA TAACTGTGTG CTATGTGTGT TGGCAAGTTA TGTTGTTGTG      3420
     TGTGAGCTAG AAAAGCGAAA TATTGACTAG TAATGGTTTA AATGAAATAT AGTTATTCTA      3480
     AGAAAGTGCA GTATATCGAA GTTGTTTTGA TGTTGGGTTG GTGGTAATCA CAGTCTTATG      3540
     GCATAGATAT AAAGAGAAAT GTTAAGTAAT TAAGAGATGC TTGTTGATGT TCTAAAAAGG      3600
     AAAGGAAAAC ATAGAGAAAA AAAATGTATT TTGAGTTATC TACAAATTGT AAACTCAAGT      3660
     GGACGTGTGT AGGTCAGGAA GGCCGTTGTC GTATATTCCT TTTTAATTTC AAATTATAAC      3720
     GTACATTTTA TATTTGCTAA AAGCTGGGCA TATTGTTTTG TTTGGGTATT TCTTCTGTAT      3780
     TCATAAAGCG AGGCAGAAAT AGTTTCTGTC AACGCAGTCT GGCATGGGCA TGAATGGGAC      3840
     GGATAGAGTC CGGTAAAACT CACCACAGTG TGTCTGTGTA GTGGTGTATG AAAGAGAATG      3900
     AGAAAGGGAA ACGCTTGGTT TTGGTCATTC TTGGTGATGA AATAAAGAGG GATAGTCATG      3960
     CCACGTGCCA GAAAGCGTTT CGTTGAGGAA ACAGAGGAAG ACTCTTGTAA CGAGGAGTCT      4020
     ACAGACCTTG GATCGACA                                                    4038
//
ID   DIVER2    standard; DNA; INV; 4917 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063439; diver2.
XX
FT   source          nnnnnnnn:1..4917
FT   SO_feature      five_prime_LTR ; SO:0000425:1..385
FT   SO_feature      three_prime_LTR ; SO:0000426:4532..4917
FT   SO_feature      CDS ; SO:0000316:436..4147
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 4917 BP; 1152 A; 1227 C; 1203 G; 1335 T; 0 other;
     TGTTGGGTCA TGCAGCCGCC AAAACTGTGC AGTAGACTAA TCTCATACTC TTTAATATTG        60
     TAAGCCGAAG TAGTCAGTGG TAGCAGTTGC GATGCCCATA GTGCAAACCG CTGTTCTCGC       120
     ACGCATTTAT CTGTACGGCG CTCATTCCTT GTTCTTTTTG TTATCTACCT ACGTTAAGCT       180
     TGGGCGCTGC ATTTCGGCTG TCTGTCCCGC CAATTGCCAC TTCTTCGTCT GTCGGAAGAG       240
     ACTAAACTTG TGCATTCGAT ATAGCTCTTT GTCGGCCCTA GCTGCTGTAA ACAATTCGCA       300
     AAATAAACAG TATCGTAAAA TAAACAAACT TTCTTCGGCT ATTTATTATT CGCAACAGCT       360
     ATTGAAAAAG CTCAATAGCT AAACATTGGT GACCCCGACG TGATAGTGTT CATTTGCATG       420
     CATTAATTAA TGCACTTATC CCGTTAATAA ATAAATATAA ATACATTAAA TCGCAATCGG       480
     TTGGACAAGT GAGTGGTGAT TTCGGTGTTA GTGGCTGTGT TTGAGCGAGC TAGCATTACA       540
     TATGTACATA CATACATTGC TACATATATC GTTACGTGCA TTGACTCCGC TGGCATTTTC       600
     GGCATATATT TTGTGCTCAT CTTCCCGCTG AACCGAATTA AAGGCGATTT GTTGCCATGC       660
     CCGCTGAAGG TAACAAAAAC AGGGTGACCT TTTTAAAGCG CAAAGCCAAT GCGCTGTTCA       720
     GCAGGTTGCA GAGGCTACAA ACGTCGCTGG CTAATGAGAC GCTAAGCGGA TACGATGAAC       780
     CCACTCTTAC GGTGAGGCTG GAGCACTTTG CAAAACTGCA AAGTTTGGCG GAGGCTACGC       840
     AAACTGGGCG GATTTTTACT CCGTGTTCAC GAGCATAATC GACAGCCATC CGGACCTCTC       900
     CAACATTGAG AAATTTTAAC ATCTGCGGTC ATGTTTGAGG GATTCGGCGC TGGAAACTAT       960
     CCGATCATTG GATATTTCAA ACAGCAATTA CGAAGCGGCT TTAGAGTTGT TTCAAAAAAG      1020
     GTTTGATGAA TCGGCGTCTC GTTTTTCAGG CGCACATCAC CGAGATTCTG GGTTCAAAGG      1080
     TAGTACCGGA ATGGTTCAGT GGCATCGCTT CGGGAATTGT CGGACAAGTT TAACGCTCAC      1140
     ATTCGTGCGT TGAAGGGTTT GGGCACCACT GAGCAAATCG CTGGCTGCAT CATAGTGCAA      1200
     GTGCTGCTGC AAAAGCTGGA TGCGGCGAGC CAAGCTAAGT GGGAGGAGAG CTTGGAGGAT      1260
     CCGATCTTTG CCAACCTTAT TCCGTCGTGG AAATCGATGG CTGCATTCCT GGAGCAGCGA      1320
     TGTAGGACTA TGGAGGCCGC GGATTGCGCC ATGGCAACCT ATGCGCCAGG CGTTCAGGTG      1380
     GGCAGAAATC GTTCGACGCT AGTTGCTACC ACCCAAAATT CTCTTGGTTG CATGCTTTGC      1440
     CATAGTGCAG AGCATGCCAT ATATTATTGC CCGCAATTTA CAGACTTAGC GCCAGTAGAT      1500
     CGTCTGCGCG AGGCAAACAG ACTATCACTT TGCCTAAATT GCCTAAAGGC AGGTCATCAG      1560
     CTACGGCAAT GCAGCTCGAG CCGCCAACGC ACCTGTGGAA TCAGGCATCA TACGCTGCTC      1620
     CATCTAGGTG GTCCGCCTTC CTCGCAGCCA CATGTTCCGG TGTCTTCAAG CTCCCACACT      1680
     GAGCCTTCTG CCCCTCTTTC GACTTCTTCT ACTCTAATTG CCCAGGATCT CGGTAGTGAC      1740
     CTTGTGCTGC TAGCCATTGC AACCGTTCTA GTGCAGAATC GGTCGGGACT GTTCGTTCCC      1800
     TGCAGGGCCT TGTTAGATTC TGGCTCTCAA CTGCACTTGG TCACCTCTCG GTTTGCAAAT      1860
     CAACTGCAAC TTAAGAGGTC AAGGTCGTCC GGCTCCGTCA CTGGAATCGG GGATTCCAAT      1920
     TTCGCGACTG TTTCGGTCGG TCACTTCGGA TTTCTCAACG AGCATAACAG CAGTTATCGC      1980
     TCCCAATATC ACGGGATCGC CAGACAAGTT TTAATGTGGA CATTGGGGAC TGGAAGATTC      2040
     CAGAAAACCT GCAGCTCGCC GACCCGGAAT TTCATATAGC TCAGCGTGTT GACCTGTTAA      2100
     TAGGAGCTAG CTTGTTTTAT GAACTGCTGT GCCGTAGGTC AGATAAGGTT GTTGCCCGGA      2160
     CTGTCCCTGC TTCAAAAAAC TCGTCTGGGC TGGGTTGTGT CTGGAGGCTG CGCGCGCCCT      2220
     TGCGGGTAGC GCCTTAATAG CTTCACGCGT TCCTTCTTCA GCCAGCAAGG AAAACAGCAT      2280
     TTGATGTTGA ACTTGATTCA CTTCTGCAGC GCTCTTGGGA GGTAGAAAAG TGTCCCGGCC      2340
     CAATAGTTCA AGCCACTAAG GAGGAGTTAG ATTGCGAGGC CCACTTTGGT TATAAATTAC      2400
     ACCCGACTGC CAGCTGGCGA TTACTCGGTA CGGTTGCCGC TAAAACTCCA TTTGGAGTCT      2460
     TTAGGAGATT CCTATCCTCA GGCTTTGCGG AGATTCTGGT CGCTGGAAAG GAAGCTTACA      2520
     AAGCACCCTG GCTTGAGGGT TAAATATTCG GCGTTCATGA AGGAATATCG TGATCCGGAA      2580
     CATATGTCGC CTGTGCCTGC CTCCGAGGTC AGCTCGTCCC GATATTTTTT TACCACATCA      2640
     CTGCGTCATG AAGGAGGATA GCACTACCAC CAAGCTTCGC GTTGTCTTTG ACGGATCAGC      2700
     TGCCACTTCC ACTGCTTACT CGCTTAACGA TGTGTTAATG GCTAGCCCGG TTATCCAGCC      2760
     CAAGCTATTT CACATCCTAA TTCGATTTCC GCTCACACCC AGTTGCCATT CGGGAGCTGA      2820
     CAGATGTCAC GGCTTGGCGT TATGTTCCAA CAGCGTTAAA TCCGGCTGAC ATCTTATCCA      2880
     GAGGATCCCT GCCGTCTGAG CTTAGCGAAT CGTCACTCAC CCGCCTATCT TACGGAGCCT      2940
     GAAAGAGATT GGCCAAAAGC TGTTTGTCCT GACAAACCGG TGCTTGAGCT TCGTCGAAGT      3000
     GTGTTCGTCG TAAAGTCGCC GTACGTGGAT GTAATTGCTA GCTCCAAATT TGCAAATTCT      3060
     TACCCCTCAC TGCAACGAGT GTTTGCATAC ATTTACAAAT TTTGTAATGG AATTCGTCAT      3120
     CCTGGGCTCA CCGTCGCACA CATTCAAGAG GGTACTCATA TGATGCTGCG GTTGGTGCAG      3180
     CGCGCGCAGT TATGGGAGGA CCCTGCAGTC CCTAAAAACG CTGGGAAGAG TTTCCTCGTC      3240
     TAGTCCCATA TCCTCGCTCT CGCCGTTCCT GGATCAATTT GGACTTCTTA GAGTAGGCGG      3300
     TCGCCTCTGG AATTCGTCAT TGGACTTTTA TGGCCGCCAC CCGAAAATCC TTCCAAGGTC      3360
     CCATTCGGTG ACTCTGGCAA TTATTTCGCA TTACCATGAA ATCAATCTTC ATGCCGGACC      3420
     TCGAGCTCTT CTGGGTGCAA TTCGATCACA ATATTGGCCT ATTGGGGGGA GGAAGACGGT      3480
     TACCAAGGCC GTGAACAGGT GCATCAGATG TTTTCGGATT ATGCCGCGGC TGATAGAGCA      3540
     CATAATGGCG GACCTTCCCA AGGAGCGCTT GGAAGGATCT CACGCTTTCG AGGTTGCTGG      3600
     TATAGACTTC TGTGGACCCT TCTTTCACAA GTCGGATACT CGCAACAAGC CCGCGGTTAA      3660
     ATGCTACGTC TGCGTATTTA TATGCTTTGC AACCAAGGCA GTGCACCTGG AGCTGATCAA      3720
     GGATCTCTCG ACAGTTGCGT TTCTGTGCGG ACTCAAGAGG TTCATATGCA CCCGGCGGAA      3780
     GCCGAAGCAA ATTTGGTCAG ACAACGCCAC CAACTTTGTC GGCGCCAAAA ATAAACTTCT      3840
     GGAACTTCGA AGGTTATTTC TCAGCAGCGA GCATCAAGGC TCCGTTCAGA ATTTTTGCCT      3900
     TTCGGAGACG ATTGACTGGC GGTTCATCCC TCCACGGTCG CCCCATTTCG GTGGACTTTG      3960
     GGAAGCAGCG GTGAAAACGG CCAAACATCA TTTCTACCGC GCTGTGGGTA CGGCGGTTCT      4020
     GACCTTCGAC GAGCTGAGGA CGCTGGTGTG CCACATCTCG GCAGTTATTA ACTCCAGACC      4080
     TTTAGTTCCC ATTTCAGAGA ACCCTGCCGA TCTGGACGTC CTCACTCCGG CGCATTTTCT      4140
     CAATGGTGGT CCGCCTTCGT CGTTTGACGA GCCAGATATA ACGGGCCTAA ACTATAATCG      4200
     GCTTGACTCT TGGCAGCGCA TCTCCTTTCT TCAGCAAATA TTTTGGTCAC GATGGAAGGA      4260
     AGAGTACTTG ACGTTGCTCC AGCAGCGCTC CAAGTGGCGC ACCCCAAAGC CTGGCGTAGC      4320
     CGTGGACAAC GTCGTTCTTG TTAAGGACGA GAATCTACCC CCAATGAGAT GGCCTTTGGC      4380
     GAGAGTCATG CAGTTGATTC CTGGCAGAGA CGGCGTCGCT CGAGTTGCAG AATTGAGGAC      4440
     CGCGTCTGGA GTAATAAGGC GGGCAGTGAA CAAGCTGTGT CTGCTTCCCC TTGAGGACTC      4500
     TGTTGGAAGC CAAGCTTCCA ACGGGGGGAG GATGTTGGGT CATGCAGCCG CCAAAACTGT      4560
     GCAGTAGACT AATCTCATAC TCTTTAATAT TGTAAGCCGA AGTAGTCAGT GGTAGCAGTT      4620
     GCGATGCCCA TAGTGCAAAC CGCTGTTCTC GCACGCATTT ATCTGTACGG CGCTCATTCC      4680
     TTGTTCTTTT TGTTATCTAC CTACGTTAAG CTTGGGCGCT GCATTTCGGC TGTCTGTCCC      4740
     GCCAATTGCC ACTTCTTCGT CTGTCGGAAG AGACTAAACT TGTGCATTCG ATATAGCTCT      4800
     TTGTCGGCCC TAGCTGCTGT AAACAATTCG CAAAATAAAC AGTATCGTAA AATAAACAAA      4860
     CTTTCTTCGG CTATTTATTA TTCGCAACAG CTATTGAAAA AGCTCAATAG CTAAACA         4917
//
ID   TRANSIB4    standard; DNA; INV; 2656 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063369; transib4.
XX
FT   source          nnnnnnnn:1..2656
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..40
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:2618..2658
FT   SO_feature      CDS ; SO:0000316:545..2152
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 2656 BP; 932 A; 455 C; 451 G; 818 T; 0 other;
     CACTATGGGT AAAAAGCCGG AAATTTTGGT ATTAATGTAA TTTTTTTTGT GATTGATATT        60
     TTAATGCTGC TTTCATTTTT TGATTCCTAA GTAACAAGAT AGCATAAAAA TAATTTTAAA       120
     ACATTTTTAC GAGTTATCGT TTATTTTTGG CGCGCTTTCA AAGTCAGCTG ATTCAGAGGT       180
     GCTTTGAATT GTGAAAATTG GCGGAAAAAG TTGAACAAAT TGCAGCGCAA ACATTGTCTT       240
     CATAGCAAAC TTTGAGTTTA TTTTTAATTA TGGAAAAAAC AAGTCAGAGT ATGTAAATTA       300
     TTCGTGAATA CACGTTTTCC GATAATTGTG TGTGGTTGTT GTTGAATTGT CCAATGTATT       360
     GCTTGTGAGT ATTTTCAATT GTTTACTAAC AAACGTTCTA GTGTTCTGTG GAATATTACT       420
     TTTGTATGGC ACAACGAATC ACCAAAGTTA AAGTTGTATG TTTTTAACAA ATATATGTGG       480
     AATCAAATGG TATTAATGTT TTTTGCCCCT TTTTGCCCTT TTTTGCGAAA CATTTTATGT       540
     TGTAGGTGTG TATAAGTTTA GTCATGCAGT TCTGCTGGAT GTTTGGAGCA ACAACAAACG       600
     CGATGCAGAC GCTGTTAACA GTTATATTTT GGAAAATATA GAAGAGAACT TTGAGACTAA       660
     AGAGCAAAAG ATTACAATTT CAAAGAAAGT GAACCAATTT ATTACTTATG TAAACAAGCA       720
     CTTAAGGAAA TGCAATCGAA TGTTGGACCG ATTCAAACGA AATCATTTAT TGTGGCTTGC       780
     GTCTAAAATT GTTGTCGTTA TTGATAAGCC AGAAATGACA CTATGCAAAC CTAGCCGAAA       840
     ACAGTTAACA TATGAAGATG CAGGGCCTCA ACCTAAAAAA AAAATTAGCA AATTAGCTGG       900
     CTGCAGAACA AGGGCATTCA ACACCACTTC TCGTACATGC TGCTTCAATT TCCGCAAAAA       960
     AAACGAAGCA GGCAGAAACG GCCTTTGTAT TAAAAAAAAA AGGATAAGCA GTGAAAACAT      1020
     ACATGATATA AAAAAGAAAA TTGAGACAAA TCATCCTATT AAAATAAGTG CTGATAATGC      1080
     TTTAGCTCTC TTAATTGAAA ATGGATTTAC AAAGCAGCAA TATAATAATA TAAAAGCGCT      1140
     CAATAAGCAG CAAGGATGCG ATATTTTCCC TCCTTATTCA AAAGTAGCAG AAGCAAAATT      1200
     GAAATGCAGG CCTTCCGAAC ATAAAATTTC TGAAAAAAGG CCAGGAGTAT CGTAGCAAGA      1260
     TTTGCTAGAT CATACAGCTG GCCACATACT TTTAATACAA GAGTAAGTTT TTTGTGTTCA      1320
     TCCAGACCCA ACGAATTGTA CATTAATTGT GAGCTATGGC TTCGATGGAT CTACGGACCA      1380
     AAGCACGTAC AAACAACGCT TTCTATCAAA CGAATGTATC GCCCTAGATC AATTCCTTTT      1440
     CGTCACTCCA ATTATACCGC TGAAACTAAT AGATGAAATC AACAATCGAG TTATTTGGAT      1500
     ACATTCATCT CCACAATCGG TGAGATTTGG TCGGCCTTTG AAAATTGAGT TTATAAAGGA      1560
     AAGTGCTGCC CTTATATTGA AGGAAAAACA AATTTTGGAT GCGGCTATAA AAAACCTTAG      1620
     ACCATATTCC TACACTTCCA AAAACCAAAT AATAGCATAT ACTGCAGACC AGCGTTCGTT      1680
     CTCGAACAGC AAGATATTTT CGTCCGTTTT GAATTTGGAC TACAAAATCA TTTACAATTT      1740
     TTATATAATT TTGATTTCAA TTTCTTGTGA GCACATGATT GATGCGAAAA ATTTAAATCT      1800
     CTATACCATT CTACTTTTAA TTTATACGTT AAATACGAAC CTTATATGGA GTACATACAT      1860
     GGTAACATAG AGTAGTCACC AACCAATATT GGTACATGGA TATAAAATTG TAAGCCAATT      1920
     TATTGTTCCT GTTAGTGTCC TTGGAGAAAA CGCGTCAGAA GCGCGCAACA AACTTTACAA      1980
     GAGCGATAGA AAATCTCACG CCAGGAAATG TAGCCGACTA GCAAACATTA CAGATGTTTT      2040
     TAACAGAGCA GTGGATTCAT CTGATCCATT GCTTTCAAGT CTTTGTCTAA GAGATCGAAG      2100
     TAAGTTTGGA AAAAAGAAAC TCCTCCCAAA AGAAGTAATC GATATTCTTC AAAATCCGGA      2160
     TGCAGAACTT TATAAATCAA GTTATCATTC TAATAATAAA GAAAAAGAAG TGGAAGTGGA      2220
     AGACGAATTC AATTGCCTTT ATAATAAGAG GAGGCAGTTG AAGAATGACA ATCAACTTAA      2280
     TAAAATATAA AAAAATTTAT TGACTTTTAT CTCATAATAA TGGTTTTTGC ATCTTGTGTC      2340
     CTCACTTCGC TCCCACGCCA ATCCCCCAGG GAAGACACCT CCGGATCCAC CGGTTGAACC      2400
     ACAGACATAT TAACACCCAC ACCTCCTTCG CCACCCATCC ATCTCCCTTT AAAACCGCTT      2460
     TCATTTGTAT ATAAATACAT TTTTCACTTT ATTTTCAAGG ATTGTTTTTG TGGGCGGAGA      2520
     TGAAGGCGTG GTCAGATCAA AAAATAAACA AAATCCAAAA TTCTATTTAA ATCCTAATTA      2580
     TAAATATAAA AAAAATCAAG TCGCTATCTT TAAAATTGTA ATTAATACCA AAATTTCCGG      2640
     CTTTTTACCC ATAGTG                                                      2656
//
ID   S2    standard; DNA; INV; 1735 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063466; S2.
XX
FT   source          nnnnnnnn:1..1735
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..235
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1502..1737
FT   SO_feature      CDS ; SO:0000316:403..1437
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 1735 BP; 597 A; 279 C; 317 G; 542 T; 0 other;
     CAGTTTGTCA AGAAATTGTT TGCACAATGA AAATAAATTG TATTTTCTGC CTTTCAATGC        60
     AAAATTAAGG GCTTTTTGTT TACCTTATGG ATTTTTTTTA ATTTACATTT ATTTGTTTAT       120
     ATGTTTTTTA TCAATATGTA AAAAAATAAT AACAAAACTA TTAACAATGA ACGAGAAAAA       180
     CAACTAAATC CAAGTTTGCA CAGATTTGAC ACTGTCAAGA AATTGTTTGC ACACTTTTCT       240
     TTTGTTTTCT ATTTTGCTCC TATTCCGAGG AATTTCGATA ATCAAACGGT ACATAATCGT       300
     CATTTACGCT TTATGCGTTG TGTGGGTGGC CGATTTATAT GCATTTGGTT GTGAAATTTG       360
     CCAAAGTGAT CATTGTTCCA GTTAGTTTTG TGAAATTTAG AAATGCCTGG CAAAAGATTG       420
     AGTTTTGAAG TAGTTCAACT GATTTTTTAT AATCACCATT TGGGAAAATC TGTCAAGGAA       480
     TTGTCAGAAA TGTTTTCTGC ATCGCGGAGA ACAATTTATA ACGTTATTAA TCGCGCAAAA       540
     AACGAGGGCA GATTGGATTC AAAATGTGGA GCAGGACGTA AAAATAAAAT TTCCAACCGT       600
     TCAGACCGAC TTATTATGCG AAAAATTTAT GAAAATCCGC AAATATCCTT AAGAACTGTT       660
     GCTAAGGAGC TTAAGGAGGA GTGCGATCTG GATGTGTCAC ACGAAACAGT GCGCCAAGCC       720
     ATACTCCGGC ATAAGTACCA CTCACGGGTA GCAAGAAAGA AACCGATGCT GTCGGCAATT       780
     AACATCGAAA AACGGCTTAC TTTCGCTATC AAAATGCAAC ATCAGCCAGA AGATTACTGG       840
     AATAACGTAA TTTTCTGCGA CGAAACCAAG ATGATGTTGT ATTACAACGA TGGACCCAAC       900
     AGAGTGTGGC GTAAGGCGCT AACTGCGCTG GAGAACCGCA ACATCATACC GACAGTCAAA       960
     TTTGGCAAAC TGTCGGTTAT GATTTGGGGA TGCATATCTA GTCGAGGAGT TGGAGATTTG      1020
     GCATTCATAG AGAACACAAT GAATGCAGAA CAATTTTTAA ACATTTTGAA ATGCAATCTG      1080
     ACATCCAGCG CCAAAAAATT CGGTTTTTAT AAGAACAATA GACCTGATTT TAAATTTTAC      1140
     CAGGACAATG ACCCCAAGCA TAAGGCGCTT AATGTGCGGA ACTGGCTCGT TTACGACTGC      1200
     GGCAAGGTCA TCGATACGCA TCCTCAGAAT CCAGATCTGA ACCCTATAGA AAATTTGTGG      1260
     GTTCATTTGA AGAAAAAAGT GGCAAAAAGG TCACCAAACA ACCGAGCAGC ACTGAAAGCT      1320
     GCTATACTAG AAGAGTGGCA TAAGATCCCA CAACAATATG ATCTTGAAAA GTTATTTTTT      1380
     CAATGAAAAA AACGTCTACA ATATGTTATT AATGCTAAGG GTATGCATAC AAAGTATTAG      1440
     AATTACCTCA AGTTATTATA ATTTGTTATA AACTATAAGT CTAAGATAGC TTAAGTACTT      1500
     TGTGCAAACA ATTTCTTGAC AGTGTCAAAT CTGTGCAAAC TTGGATTTAG TTGTTTTTCT      1560
     CGTTCATTGT TAATAGTTTT GTTATTATTT TTTTACATAT TGATAAAAAA ACATATGAAT      1620
     AAATAGATAT TAATAAAAAA AATTCATGAA TTTTAATAAA AGGCCTTTAT ATTTTTGCAT      1680
     TGAAAGTCAA AAATACAATT TATTTTCATT GTGCAAACAA TTTCTTGACA AACTG           1735
//
ID   DM88    standard; DNA; INV; 4558 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0062343; Dm88.
XX
SY   synonym: copia2
XX
FT   source          nnnnnnnn:1..4558
FT   SO_feature      five_prime_LTR ; SO:0000425:1..198
FT   SO_feature      three_prime_LTR ; SO:0000426:4360..4558
FT   SO_feature      CDS ; SO:0000316:317..4285
XX
CC   Full sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 4558 BP; 1480 A; 803 C; 1097 G; 1178 T; 0 other;
     TGTTGAAAAT ATGTATGTAA TATGTATGTA TATATAATAA TATGTAATAA AGTCAATGCA        60
     CTGTGTCTCC CTCTTTTGGT CGCGGTAACC AAAAGCTTTT TTCTCTTATT GTGTTATCCT       120
     CTTTAGCGTG TAATTTGGCT GCCTGCGTGC AGTAACATTG TACTCTAGAT CAGTCACAAT       180
     AAATACTTGA AACGAATAGG TTATGGGCCC AGCCCACGCG GACATAAAAG TGAATAGTTC       240
     TAAACGAATT AGAATATTCG GCATCTTTAA ATATTGTGAT TCAGGGATTT AATACGAAAA       300
     ACTTATCGAA GTGAAAATGA GTTCATCAAT AAACCAAATA GAAAAACTTG ATGATGAAAA       360
     CTACAGTGCG TGGGCTGTAC AAATGAAGAG TGTCTTAATT CATGCGGAAT TATGGGGGGT       420
     GGTGTGTGGA CGTGTGGTTA AAAACGAAAG TGATAGTGCT GAGCTAAAGG CTTTGTTCGA       480
     CGCGAAGGAC GAAAAAGCAT TAGCAAGTAT AATGCTATGC ATTAAGACAT CCCAAATTAA       540
     CCATATAAAA AACTGTGAGA CTGCTGTAGA GGCATGGCAA AGACTTAGTG AAATCCACAC       600
     TCCCTCAGGA CCGGCACGAC GTATATGTTC GCTAAAGCAG TTGTTGCACA TGAGAATGTC       660
     TGAAACAGAA GTTGTTTCGA GTCATGTGAA CAATTTTTGT GCGGTTGTTG AAAAACTAAA       720
     AGAAATTCAA TTGGTGATCC AAGAAGAAGT CCTGAGTATT CTCCTGTTGT CCAGTTTGCC       780
     GGAATCGTTT GAAAGTTTCG TAGTTGCAAT AGAAACGCGC GATGAGTTGC CCACATTGAA       840
     AATGTTAAAA ATAAAATTAC AAGAGGAAGG GCAAAGGCGT ATGGCAAATG AAGAACATTC       900
     TGCAAAAAGC GAACAAAGTG CATTTGGAAT TCGGTCTGCG AAACAAAAAG CGAAAAGTGA       960
     CATTAAGAAG AGTGTGCAAG TAAATAATCA GCAACTGATT AACGGGAAAA GAACAGTTAA      1020
     TTGTTGGAAC TGTGGTCGCA GCGGCCACAA AGCTGTAAAC TGTATGTATA GGCAAAGGAA      1080
     AGGAGAACAT AGAGAGAGCG AAAACTTAAA TACCGAGAAA TCATTCTCTG TGCTCTGTTC      1140
     AACTGTACAG CTTGGCGAAT TGCCAAAAAA TATGTGGTGC CTTGATTCAG GAGCAACGGC      1200
     TCATTTGTGC GGTGAGAGAT CGATGTTTAA AAGCTTCAGA GAGCATAAAG AGCGCATTCT      1260
     TTTGGCTGGC AATAAGTATA TTATGGCTGA CGGTCGTGGT ACAGTGAAAA TAGCCTGGCG      1320
     CAACTCATCA TTTGAATTGA TCGACGTACT CTTTGTAAAG AATTTACAAT GCAACTTTAT      1380
     GTCGGTGTCG AAGGCAATTG AAAACGGATT TCGTGTGTCG TTCGAAAACA GGCGCGGAAT      1440
     TTTAAAAAAT GATAAGAATA AAGTTGTTTT GATTGCTGAA CTGCAAAGTG ATTTGTTTAT      1500
     GTTCCAAAAT GAAAGAAAAG TTGAAAGTGC ATGTTTCGTT GCACAGACAA ATTTAATGAG      1560
     AAAGTGGCAC CAGAGATTCG GTCATTTGAA CTTTGCAAGC TTGAACAAAA TGATCAAACA      1620
     AGAAATGGTA CTCGGACTAA AGAAAAAATA TTTAAGTGGC GCAAAAGAAA ATGACTGTTT      1680
     GAGCTGCGCA AAAAGCAAGA TATGTGTGAA GAGTTTCCCA AAAGCCTCTG GAAATCGCAC      1740
     AAATGAAGTA CTGGAGCTAG TGCATAGTGA CATCTGTGGT CCAATGCAAA CGACGTCTGT      1800
     TGGAGGTGCA CGCTATTTTG TCACCTTCGT AGATGACAAA TCGAGATACA TGTTTGTGTA      1860
     TTTCATAAAG ACGAGAGATG AAATACTGGC CAAATTCAAG GAGTTTAAAG CATTTGCCGA      1920
     AAACCAAAGC GGCAAGAAGT TGAAAGCAAT AAGGAGCGAC AACGGGCGTG AGTATTTAAG      1980
     TAAAGCGTTT CAATCTATCT TGACAGAAAA CGGCATAAAG AGACAATTGA CGGTACCGCA      2040
     CACCCCACAA CAAAACGGTG TAGCGGAGCG CGCTAACCGA ACCCTGGTCG AGATGGCAAG      2100
     GACTATGATG ATTCACGCAG GCGTCGGCGA CTCACTATGG GCTGAAGCTA TCAATACTGC      2160
     TGCTTATCTA CGCAATCGCG CTGAGACGTC AGCATTATCT GATGTAACAC CGTTCGAGTC      2220
     TTGGACTGGA AGAAAGCCAT ATGTGTCCCA CCTGAAGATA TTTGGTTCGA AGGCTATCGT      2280
     GCTTAACAAA TCCACAAAAA GGAAGTTTTC TGCGAAGGGC GAAGAAAATA TTTTGGTTGG      2340
     ATACTCTGAT GCTTCTAAGG GATATCGCCT GTTCAATCCT ATCAGGAAGA ATATCTGTGT      2400
     TGCTCGTGAC GTAATTGTAT TTGAGAACGA CCAGGATGAT GGTATGACGG CAGGGCAAGC      2460
     AGTACCTTCT CCCGATGTTC AACTTGTGGA GATGCAGCAC CTTCCAGTCT GTGTTGCTGA      2520
     GGGTAAGAAA CAAGATGATG TTTTCCAGGT GTCAGATAAA CACGTTGACG ACGTTGCGTC      2580
     TGTCGAGCAA CACCGATTCA GAGGGAGAAG TCGTCATCCA CTGAAGACAA TGAAGCCACC      2640
     GAAGTCAGAG GACCTGGACG GCCAAAGAAG ATTTATACTG GTAAACCTGG AAGACTACGA      2700
     AAACAATACA ACATGGTCAA CGGCATGAGT ACGGATGAGG TTCCAATTCC AACAAGGCGT      2760
     CAAGGAGGCG TTAACCATAA GAAACTTTGA AGAATGGAGA ACCTCAATGC AGAAGGAGTT      2820
     GGAGAGCCTA CGTGCAAACA AAACCTGGTC ATTGGTGGAT TTGCCGGCAG GTGAGAAGGC      2880
     CATTGGGTCA AAATGGGTCT TTGCAGTGAA GCGTAACAAG ATGGGCAAAG TCGAGAGGTT      2940
     TAAGTCTCGA CTTGTCGCAA AAGGGTGCGC TCAGCGATAC GGCGTTAACT TCACGGATAC      3000
     GTTCTCACCA GTGGCACGCT ACTCATCAAT CAAATTAGTA ATTGCTTTGG CGGTGGAAAA      3060
     CGGTCTCTAC ATGCACCAAA TGGACGTCTC GTCTGCATAC TTGAATGGTG ATCTTCACGA      3120
     AACGGTATAT ATGAGGCAGC CAGAGGGATT CATCGATGAA CGATATCCAA AGAAGGTGCT      3180
     GAAGTTACAC AAATCTATAT ATGGACTGAA GCAGAGCGGC CGAGAATGGA ATAAACTACT      3240
     GAACGAAGTA CTGCAAAAGA TTGGGTTTTC TTCATGCCCT AGCGAGCCAT GTGTTTACAC      3300
     CCGTAATTCT GGCAAAAGTA AGAACCTTGT TGTAGTGTAC GTAGACGACC TTATCATAGC      3360
     CAGTTCAAGC AAGGAGGAAC TGTGCGATAT TAAAGCATCA ATTTCAAAAG AATTCGATGT      3420
     CGTAGACGGG GGCGAGCTAA GACATTTCCT GGGTATCGAA ATTGAACGTG ACGGAGAAAC      3480
     TGGTGGAATC AGGATTGGCC ACAAGCAGTA TATTGAGAGC CTTCTCAATG ATTATTCGAT      3540
     GCAGGATTGT AAGCCGAATC TCATCCCACT GGAAGCAGGC TTTGAAGTAA AATGTGACAA      3600
     GGCCGATTGT CAGAAGGTGA ATCAAGTCAG CTATCAATCG CTGATTGGCT CATTAATGTA      3660
     TCTGGCAATC ACAACTCGTC CTGATATTAT GCATTCGGTC ATTAAACTAT CACAACGGAA      3720
     CTCTGACCCA CATAAAGAGC ACGAAGCCGG TGCAAAGCGA GTTCTGCGAT ACTTGAGGGG      3780
     CACAGCTGAT TTGCAGTTAC ACTACGAGCG TACTGGTGTG CCTATACATT GCTATGTTGA      3840
     CGCGGATTGG GCTGGTGACA CCACGGACCG AAAATCCTTT ACTGGATGGG CATGTATTGC      3900
     TGCAGGAGCT GCCTTTACGT GGGACTCAAA GAAACAATCA GTGGTTTCCC TAAGCAGCAC      3960
     AGAGTCAGAG TATGTGGCAC TTTCCATGGC AGCGAAGGAA GTGGCGTATG TTCGGAAATT      4020
     GGTCAACGAA ATGGGTTTTG GTGAAACACA GGCAACTAAG GTTTATAGCG ACAACCAGAG      4080
     TTCCCAGTGC TTGGTGAAAA ATGACACTTT CCATGCACGT AGTAAGCATA TAGATATAAA      4140
     ATATCATTAT ATAAGAGAAC TGTATAAGAA CAATATAATA GAAGTTAATT ATGTACCCAC      4200
     AGAAAACATG ATGGCAGATG TTCTAACCAA GAATTTGAAT AGATTTAAAC ATGAAAAGTG      4260
     TATCCAAGGG ATGGGTTTAA ACTAACAAAA ATGTATTTTG ATTTTGGAAT TAAGATAAAA      4320
     ATATTATCCG TAAGGGTTGA CATATTGCAT TGAGAGGGAG TGTTGAAAAT ATGTATGTAA      4380
     TATGTATGTA TATATAATAA TATGTAATAA AGTCAATGCA CTGTGTCTCC CTCTTTTGGT      4440
     CGCGGTAACC AAAAGCTTTT TTCTCTTATT GTGTTATCCT CTTTAGCGTG TAATTTGGCT      4500
     GCCTGCGTGC AGTAACATTG TACTCTAGAT CAGTCACAAT AAATACTTGA AACGAATA        4558
//
ID   JUAN    standard; DNA; INV; 4236 BP.
XX
AC   AY180919;
XX
DR   FLYBASE; FBgn0046110; Juan.
XX
SY   synonym: Strider
SY   synonym: DOC6
XX
FT   source          AY180919:1..4236
FT   SO_feature      CDS ; SO:0000316:179..1330
FT                   /protein_id=""
FT                   /db_xref="FLYBASE:; Juan\ORF1"
FT                   /translation="MRTKRNKPLVERQNERGSKQFTNYFRPLQTLDDDNDDKPIETDTL
FT                   DEIIIKPPPITLIKQNTKFVHELMAKIKTDDYFIKTISIGIKIFLPNMDCFNAACNQLK
FT                   EHNCEFYTYDTRSNKPYKAILSGLDKLPIETVKSMLQNLGLQCTEVKIVEKKTKSDHEL
FT                   LLYIVYFVNKSITVKELRKNFMYVNHTKVRWEYKVKLQNKITQCYNCQLFGHGSNNCSV
FT                   KTSCAHCAGSHQTAVCMDVNNKKCANCKGDHPSTELTCPCRISYLNLLSKRSSQRIGRN
FT                   NLEAHGMRNSKQHIAPSALFGNQPQISLPTQTKRVQQLNFGSYSNALTNIHTLPNPKAN
FT                   ITNETNLFSCEEINSLLSELITRFNECSNKGEQFQVISQLAIKYVYTNK"
FT   SO_feature      CDS ; SO:0000316:1329..3983
FT                   /protein_id="AAN87272.1"
FT                   /db_xref="FLYBASE:FBgn0062541; Juan\pol"
FT                   /translation="MFTQTNNFIDNLNIMAWNARAVRNKRIELIKFLENNHIHIALIN
FT                   ETWLTHSDRFNIPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQI
FT                   NTDSNSSLKIYSIYFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICG
FT                   DFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPHNHKAKASTLDLCLTN
FT                   IPNQLANPAVMQELSSDHLPVVIKYSTNFMRNVKTYPILGRANWALFKRIINERLMVE
FT                   EVVVNCSQISTLDIDNLIGSFTRVINYAFLKAVPHKPIHHSKLTLPVHITELFKTRNI
FT                   IQRQWFRSRHPLLKSRCDHLNYIIRKELFIYNNAKWNNKLQKLDKCSKPFWNITKAIK
FT                   KRKQIVPCLSKADEIYASGKEKANILADVFQLKHNLTHSYSNQNTIDQVKISLQSIAE
FT                   TPNNIAEICRVTYPEVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCL
FT                   QAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIH
FT                   NTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLH
FT                   KLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTH
FT                   DIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNA
FT                   IFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKII
FT                   CTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL
FT                   IMNLPYYTNTKYLHIKAGVQKVQQKIQY"
XX
CC   Sequence from BDGP, January 2002.
CC   Any changes to original sequence record are annotated in an FT line.
CC   Repbase, http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   for ORF1.
XX
SQ   Sequence 4236 BP; 1572 A; 791 C; 636 G; 1237 T; 0 other;
     ACAGTCTTCG ACTAGCTCTT GTCGAACGCG GATGTAAAAT CTTCTATTCT CTCTGAGAAC        60
     ATTTTGGTGT ACATTAAATA TTTTCTGTTT TCTTCTTTAA TTGTGATATT CGCAAAAAAC       120
     TACAATCAAA CGTTCAAGTG ATGCAATTGG CGATGCTGAA GCATCTGCCG TTGAAAAAAT       180
     GCGTACTAAA AGGAATAAAC CACTAGTGGA GCGCCAGAAC GAACGGGGCT CCAAGCAATT       240
     TACAAATTAT TTTCGTCCAC TACAAACTTT AGACGATGAT AATGATGATA AACCTATTGA       300
     AACGGACACA CTTGATGAAA AAATAATCAA ACCACCTCCT ATAACATTAA TTAAACAAAA       360
     TACAAAATTT GTACACGAGC TAATGGCTAA AATTAAAACT GATGATTACT TTATTAAAAC       420
     CATCTCAATT GGAATTAAAA TATTTTTACC AAATATGGAC TGTTTCAATG CAGCTTGTAA       480
     CCAACTCAAG GAACATAACT GTGAGTTCTA CACGTACGAT ACTAGATCAA ACAAGCCATA       540
     CAAAGCCATT TTATCCGGGC TGGATAAACT ACCAATTGAA ACTGTCAAAT CCATGCTACA       600
     AAACCTAGGA TTACAATGCA CCGAAGTCAA AATTGTGGAA AAGAAAACTA AGTCTGATCA       660
     TAAATTATTA CTGTACATTG TTTATTTCGT AAACAAAAGT ATCACAGTAA AGGAACTGCG       720
     CAAAAACTTT ATGTATGTCA ACCACACTAA AGTACGCTGG GAGTATAAAG TAAAATTGCA       780
     GAATAAAATT ACTCAATGCT ACAATTGCCA ACTATTTGGA CATGGATCAA ATAATTGTTC       840
     AGTTAAAACA TCATGTGCCC ATTGTGCTGG ATCACACCAG ACTGCCGTAT GTATGGACGT       900
     AAACAACAAA AAATGCGCTA ACTGTAAAGG CGACCATCCA TCGACAGAAC TGACATGCCC       960
     ATGCCGAATT TCTTATCTCA ATTTACTTTC CAAACGCTCA TCACAACGCA TTGGAAGAAA      1020
     TAACTTGGAA GCTCATGGAA TGAGGAATTC TAAGCAACAC ATCGCTCCAT CTGCTCTCTT      1080
     TGGAAATCAA CCCCAGATCT CATTGCCTAC TCAAACTAAG AGAGTGCAAC AACTCAACTT      1140
     TGGTAGCTAT AGTAATGCAC TCACCAATAT TCATACTTTG CCTAATCCCA AAGCAAATAT      1200
     CACAAATGAA ACTAATCTCT TTTCATGTGA AGAGATAAAT TCTCTTTTGT CTGAATTAAT      1260
     AACAAGATTT AATGAATGCT CCAATAAGGG AGAGCAATTT CAAGTAATTT CTCAGTTAGC      1320
     GATTAAGTAT GTTTACACAA ACAAATAATT TTATTGATAA TTTGAATATT ATGGCATGGA      1380
     ATGCTCGTGC CGTTAGAAAC AAACGTATAG AACTGATCAA GTTCTTAGAA AATAATCACA      1440
     TTCACATAGC ACTTATAAAT GAAACGTGGC TGACTCATAG TGACCGTTTT AATATACCCG      1500
     AATACACTAT ATACAGAAAT GACAGGAAGG AAAGTAGGGG AGGCGGCGTT GCCATTGCAG      1560
     TTAGTAACAC ATTGATACAT GAACAAATAC CCTGCATTAA AAGTCATGTT ATTGAAAATG      1620
     TAGGTATACA AATCAACACT GACTCTAATT CCAGTCTAAA AATTTACTCT ATTTACTTTG      1680
     CTGGAAATAC TTCAAAATGT ATTCCTAGTT CATGTGATTT ATCTTGGGAC CATAATCATT      1740
     TAAAAAGTTT GTATAGATCT GATCTCCTTA AGATCTCACA AATAAATGGA AATTTTCTAA      1800
     TTTGCGGGGA CTTCAACTCG CGCCACAGAG CATGGAAGTG TACCCGAGCC AATGGTTGGG      1860
     GCAAAATTCT CAATGAACTT TCAGATCTGG GAAAATTCAG TATTTTGTAC CCTACGCAAC      1920
     CCACATATAT TCCGCATAAC CATAAAGCAA AAGCATCAAC ATTGGACCTA TGCCTCACTA      1980
     ATATCCCTAA CCAGCTGGCT AATCCAGCAG TAATGCAAGA GCTTTCCTCT GATCACCTAC      2040
     CAGTGGTTAT TAAATACTCT ACAAATTTTA TGCGCAATGT AAAAACATAT CCGATTTTGG      2100
     GAAGGGCAAA TTGGGCGCTT TTTAAGAGAA TTATAAATGA AAGGCTGATG GTTGAAGAGG      2160
     TGGTTGTCAA CTGCTCACAG ATATCGACTT TGGATATTGA TAATTTAATC GGCTCTTTCA      2220
     CTAGAGTAAT CAATTATGCC TTTCTTAAAG CAGTCCCTCA TAAACCTATA CATCACTCCA      2280
     AGCTTACACT CCCTGTACAT ATAACTGAAT TATTTAAAAC AAGAAATATT ATCCAAAGAC      2340
     AATGGTTTAG GTCACGTCAT CCATTATTAA AATCAAGATG TGATCATTTA AATTACATCA      2400
     TACGAAAAGA GCTTTTCATT TATAATAATG CAAAATGGAA CAATAAACTT CAAAAGCTGG      2460
     ATAAATGCAG CAAACCCTTT TGGAATATAA CCAAAGCAAT TAAAAAAAGA AAACAAATTG      2520
     TTCCGTGTCT AAGTAAAGCT GATGAAATAT ACGCTTCTGG AAAAGAAAAA GCGAATATTC      2580
     TTGCTGATGT CTTTCAACTG AAGCATAATC TGACACATTC ATATTCAAAC CAAAATACAA      2640
     TTGACCAAGT CAAAATATCT TTACAATCTA TAGCTGAAAC CCCAAACAAC ATCGCAGAAA      2700
     TTTGTAGAGT CACTTATCCA GAGGTTTTTT CAATTGTAAA AGCTCTCCAT ACTAGAAAAT      2760
     CTCCTGGAAT TGATGGAATA CCTAATATAT CCTTGAAAAA CCTTCCTACA AGCGCCATTA      2820
     ATCATATTGT TAACATTGCC AATCACTGTC TTCAGGCAGG CTATTTCCCA CGGGATTGGA      2880
     AGATAGCAAA AATAGTTCCA ATTCTCAAAC CAGGAAAACC TCCTGATAAC CCTGAAAGCT      2940
     ACCGACCAAT AAGCCTATTA AGCGGATTGT CCAAGATTCT GGAAAAATTA ATTAAATTGA      3000
     GATTGGTGAA ATTTTTGGAC ATACACAACA CACTACCAAC GGTACAGTAT GGTTTTAGAA      3060
     ATGGTCTAAA TACCATACTG CCGACCTTAA AACTAAGAAA TTATATTAAA GAAAGTATCC      3120
     AATCCAAACA ATCTGTAGGG CTGGTTACAC TTGATATTGA GGCTGCATTT GATACTGTAT      3180
     GGCATGACGG ACTGTTGCAC AAACTAAAGA TGATTGGAAC TCCCATATAC CTCATTAAAA      3240
     TAGTTCAAAA TTTTTTGACA CATCGATACT TTAGCGTTAA TTTGAACAGT AGTCAATCTG      3300
     CTAGACGAAT TTTAAATGCA GGTGTGCCAC AGGGTTCTGT CTTAGGACCT ACATTGTTTA      3360
     ATATTTTTAC ACACGATATT CCACAAGCTA CAAACTGTGT ACTTTCACTG TTTGCTGACG      3420
     ACGCCGCTGT CTACAGTGCT GGTTTCTCGT ACAGCGAGAT AAATCAATCC ATGCAGAGTT      3480
     ACTTAAATGA ATTAGACATA TATTACAAAA AATGGAAAAT TAAAATTAAC CCTAATAAAA      3540
     CGAATGCTAT ATTTTTTACA AAAAGAAGGA AACCTCGTTA TCTTCCTGAT AGACAGTTGC      3600
     GAATACTAGA CTCTCCAATA CAATGGGTTG ACAACATTCG ATATTTGGGT ATAATTTTTG      3660
     ATAAAAAACT AACATTTAAA TACCACATCA ACAACACAAT TATGAAAGTT AATAAAATTA      3720
     TTTGCACACT GTACCCTCTA ATAAATCGTA AATCTAAATT ATCAATATCC AATAAGATCA      3780
     TAATTTTTAA AACAATTTTT AATCCAATAT TAATGTATGG GTCACCTGTT TGGGGTAGAT      3840
     GTGCTCAAAC TCATATCAAA AAACTTCAAA TATGCCAAAA CAAGCTATTA AAATTAATAA      3900
     TGAACTTACC TTATTACACA AACACTAAGT ACCTACATAT AAAAGCAGGT GTACAAAAAG      3960
     TTCAACAAAA AATACAATAT TAACAATCTT TTGTTTCAAG TCTTAGTTTT TAAGTTAGTT      4020
     GTAAGTCAAT TAAGGTTTTT CTTCTCCCTT GTTTTCCTTA ATAAATAATA AATATTGTTA      4080
     TACAAAAAAC TAAAAACAGG TCAACTAGAC ATAATTAATA AATATTTCAG ATGAAAGCCT      4140
     TAGCTAAACA CTGTAAATAC CTAATTATAC CATTAGCTTT AATGAAATGT ACATATATAT      4200
     ATAAGGGATA AAGCACAAAT AAATAAATAA ATAAAA                                4236
//
ID   FROGGER    standard; DNA; INV; 2 BP.
XX
AC   AF492763;
XX
DR   FLYBASE; FBgn0061513; frogger.
XX
FT   source          AF492763:1..2483
FT   SO_feature      five_prime_LTR ; SO:0000425:1..203
FT   SO_feature      three_prime_LTR ; SO:0000426:2281..2483
FT   SO_feature      CDS ; SO:0000316:997..2244
FT                   /protein_id="AAM11672.1"
FT                   /translation="MLLAVAAEKDLHMHQIDISNAYLNSDLEEDVYLKQPKNYVDKEN
FT                   PGKVLKLQKAIYGLKQSERLWNDALNEVLQNMGFKRSKNEACLYYKKQQNGFSYIAVY
FT                   VDDLIIISPKESDIEDIKGSIATKFDMKDGGQLRYFLGMEISRKGQTGPIKLCQKRYI
FT                   ENLLRRYGMQSCRLVGTPFDPGYESGCTNEKCAKVNLTHFQSLIGSLMYLAVVSRPDI
FT                   LHSVSKLSQRNTDPHHEDEAAAKHVLRYLCGTINLSIIYMKTGELVKEFADADWANDK
FT                   VDRKSYSGYAFLMAGSAFSWGSSKQSVIAQSSTEAEYIALSTAAKEAVFLRRLLQEMG
FT                   WFDKGPLKLLCDNLSASSIAKNPINHKRTKHIDVRYHFIRDKVNKNEIIVEYVNTQNN
FT                   VADILTKAKALWLFEITWICLNL"
XX
CC   Sequence from BDGP, January 2002.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 2483 BP; 621 A; 534 C; 492 G; 836 T; 0 other;
     TGGTTGCATA AGAGTGCCGC CGCGGTAAAA TGATTGAGAC AATGAGATGT GATTAGGGTG        60
     AATGCTTTAT TAGAACTGAA CTGTGTACAT AACTTCGTAT ACATGCTTCA CTACTTTGAG       120
     TGGCAAATGA GAGCAAGAGA AGCTTGCTCC CTGAGAGAGT AATAAAGTTG CCAGACAGAT       180
     GATACGCAAT CTTATATTTC CAACACTTTT GCTTAAGATC AACATCATCT GTTTTGCAAT       240
     TACAAATTTA AACAAATCCA AGTGATTTCA AAAAGCCACA ATGCTTTTGC TTTGGTTAGT       300
     ATATCTGCGA CATTATTCTG AGTGTTAACA TATTCAACAA TTATTTCATT TTTGTTAACT       360
     TTGTCCCTTA TAAAATGATA TCTGACATCA ATGTGTTTTG TACGCTTGTG ATTAATTGGA       420
     TTCTTGGCAA TACTCGAGGC GCTCAGATTG TCGCATAGTA GTTTCAATGG CCCCTTGTCG       480
     AACCATCCCA TCTCTTGTAA GAGTCTTCTT AAAAACACTG CTTCTTTTGC TGCTGTTGAT       540
     AAGGCGATGT ATTCAGCCTC GGTGCTGCTT TGGGCGATGA CGCTCTGCTT TGATGAGCCC       600
     CATGAAAATG CACTTCCAGC CATAAGGAAT GCATATCCTG AATACGACTT TCGGTCGACT       660
     TTGTCGTTTG CCCAATCTGC GTCTGCGAAT TCCTTGACCA GCTCGCCGGT CTTCATGTAG       720
     ATAATGCTCA GGTTGATTGT CCCACACAAA TATCGTAGCA CATGCTTTGC TGCTGCTTCG       780
     TCTTCGTGGT GAGGATCTGT ATTTCTCTGT GATAACTTGC TGACAGAGTG CAATATGTCT       840
     GGTCGACTTA CTACTGCTAA ATACATAAGC GAACCAATTA GTGATTGAAA ATGGGTTAAA       900
     TTTACCTTTG CACATTTCTC ATTTGTGCAA CCAGATTCAT AACCAGGGTC AAATGGGGTT       960
     CCCACTAGTC GACAGCTTTG CATGCCATAC CGTCTTAGTA GATTTTCAAT GTAGCGCTTT      1020
     TGACATAGCT TTATAGGACC TGTTTGTCCC TTTCGGCTTA TTTCCATCCC AAGGAAATAT      1080
     CTCAGTTGGC CGCCATCCTT CATATCAAAC TTTGTTGCTA TGCTCCCTTT GATGTCTTCT      1140
     ATGTCGCTTT CTTTGGGAGA TATGATGATC AAATCGTCAA CGTAGACAGC TATATAGCTA      1200
     AAACCGTTTT GTTGCTTCTT GTAGTATAAA CATGCCTCGT TCTTGCTTCT TTTAAAGCCC      1260
     ATATTTTGAA GAACTTCATT TAAGGCATCG TTCCACAGTC GTTCAGACTG CTTAAGCCCA      1320
     TAGATTGCTT TTTGCAACTT AAGGACTTTT CCAGGATTTT CCTTGTCAAC GTAATTTTTT      1380
     GGTTGTTTCA AATAAACATC CTCCTCAAGG TCGCTGTTTA GGTATGCGTT TGATATATCA      1440
     ATTTGATGCA TGTGAAGGTC TTTTTCTGCA GCAACTGCAA GCAGCATCCT GATGGTCTCG      1500
     TACCTGATTA CCGGGGAATA TGTTTCCCAG TAGTTCACTC CAAATTGTTG TCCACAACCT      1560
     TTGGCAACAA GTCGTGATTT GAATCTCTCT ATTTCGCCAT CCTTGTCTTT CTTGATGCGA      1620
     AATACCCATT TTGATCCAAT TGCTTTTGGG CAGGTCTACC AGTGACCATG TATTGTTGGC      1680
     TATTAACGCT TCATACTTCG CTCGCATTGA ATCCTGCCAA TTTACAATTG GCCCTTGAGT      1740
     GCTTGCTCCA ACGACTGCGG TGTTTCTTCA TCTTCCTCGT AATTCAAATA TTGAAGAGTT      1800
     TGATACACCT TTTTCGGCCT TCCTGGTTGG CCAGTTCGTA TGAACTTTGG TCGGCCTGGC      1860
     CTTCGCTGTT GTGCCATTAG GGTGTCATCT GCAGATTGGT CATCAGAGTC GTCATTGGCA      1920
     CTGACAAACG TCCTGCCCTC ATCGCTGTCG TAAACGGCTT CTTCATCGTC AGTACTGCTG      1980
     GCTTCAGCTA GCAAGTGACG TTTCAGCCCA TAAAAATTCA TCCAAACCAG CATGTATTAA      2040
     AAGACTTTTG GCCATTTCCA CAATTGTGCG GTTTGCACGT TCAGCAATTC CGTGTTGCTG      2100
     AGGGGTATAC GAGACACTTA ACTGTCTCTT TATCCCGCAT TGGCTTAAAC AAAGATAGAC      2160
     GCGAGTTCTT TTCTCTTAAC TTTGTTTTAT TTTTGGTTAC TTCACTTTGA TCACTTCACG      2220
     AATACTTTGT AAACGAATCA ATACATTTCT TTACGCGTAG GGCCTGGGCC CATAACCAAA      2280
     TGTTTGCATA AGAGTGCCGC CGCGGTAAAA TGATTGAGAC AATGAGATGT GATTAGGGTG      2340
     AATGCTTTAA TAGAACTGAA CTGTGTACAT AACTTCGTAT ACATGCTTCA CTACTTTGAG      2400
     TGGCAAATGA GAGCAAGAGA AGCTTGCTCT CTGAGAGAGT AATAAAGTTG CCAAACAGAT      2460
     GATATGCAAT CTTATATTTC CAA                                              2483
//
ID   ROVER    standard; DNA; INV; 7318 BP.
XX
AC   AF492764;
XX
DR   FLYBASE; FBgn0061485; rover.
XX
FT   source          AF492764:1..7318
FT   SO_feature      five_prime_LTR ; SO:0000425:1..367
FT   SO_feature      three_prime_LTR ; SO:0000426:6952..7318
FT   SO_feature      CDS ; SO:0000316:1282..2535
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /protein_id="AAM11673.1"
FT                   /translation="MATASPIILSDSNMSQVERQINAVEIFNGDPNTLHTFITRIDFI
FT                   LALYQTTDERQKLIIYGHIERNISGDVIRTLGTNNFTSWIELRTRLILYYKPQAPSHQ
FT                   LLEDFRNIQYKGNIRQFLEEAEKRRQVLMSKLELENNSAETALFTRLIQDSIENLILK
FT                   LPNHIHLRIVNCQIPDLRSLINILQEKGLYEPQTLNKDNFKPAPNSNRTPNNLPNRQV
FT                   NGQNKPITPFQPYHNNVFQPYYPPYPYAPIHTPRPNQTPFPQYQPRPTYPQPNIPRPN
FT                   PVFNRQNIFDQNRFGPNQTYTPNNFPPTGNTQTNNPVKRQRPSDSGQTKMSIEELRYQ
FT                   EMVSNQPEYPYHYYYPYYPDNFQPQPYPYQMSYIPDPTQIPFEQDHDTSDKTQQEQTA
FT                   PNDDESDNTKEAENFRLVAPDQTNI"
FT   SO_feature      CDS ; SO:0000316:2595..5144
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /protein_id="AAM11674.1"
FT                   /translation="MLTWNIFETPIQQTNHLIHTSNGSVTINETTTIPPNNYFPIAQE
FT                   FLIHKFSDHYDMLIGRKLLSKAKAIIDYQKKTATLFNKVYKIKDTEKLTDQNHAQVDS
FT                   SFPQDPTFLETSTLQENLFRLNHLNAEEKYKLTNLLTRFKDIQFHEGDKLSFTNQEKH
FT                   TINTTHNIPVYSKMYSFQQSYEQEVERQIQEMLEQGIIRESSSPYCSPIWVVPKKLDA
FT                   SGQQKLRIVIDYRKLNEITINDRYPMPNIDEILGKLGRSNYFTTIDLAKGFHQIEMDS
FT                   ESIAKTAFSTKYGHYEYTRMPFGLKNAPATFQRCMNNLLRPLLNKNCLVYLDDIIVFS
FT                   TSLEEHLQSLEAVFEKLSQANLKLQLDKCEFLRQETTFLGHVITKDGIKPNPEKIKAI
FT                   QDYPLPSKPKEIKAFLGITGYYRKFIPNFSDIAKPLTKCLKKGVKIDTKHKEYIEAFQ
FT                   KLKLLISEDPILKIPNFERKFVLTTDASNVALGAVLSQDGHPISYISRTLNEHEVNYS
FT                   AIEKELLAIVWATKTFRHYLLGRHCEIASDHQPLCWLHKLKEPNSKLTRWKIRLSEYD
FT                   FDIKYIKGKENHVADALSRIKIEQAFFGESTQHSAEEDNSDLIGLSEKAINYHKRQII
FT                   FSKGPNSSIEHETYFKKQIIHISYKEMTLEAAKQYLLNHFCSKNSALYIESDADFEMI
FT                   QNAYTTTMNPKCTKIFRSLVLLKNIPTYASFKELILNTHEKLLHPGIQKTVKLFSENY
FT                   YFPNSQLLIQNIINECQVCNLAKTEHRNTEMPMKITPKPEHCRDKFVIDIYSSEGNHY
FT                   LSCIDIYSKFATLEQIKTKDWVECKNALMRIFNQLGKPKLLKADRDGDSPA"
FT   SO_feature      CDS ; SO:0000316:5823..6575
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /protein_id="AAM11675.1"
FT                   /translation="MLRELNAITLHQTNRQKRGLINIMGSAFKYLFGTLDNNDRIQIH
FT                   NQLESATNNSINIHEMSDIIQLINSNMQKIKEFEDEHNNREQMLYELIQFTEYIEDIA
FT                   MGMQLSRLGLFNPKLLNYDKLENVDSSNILQTKTSTWINTNQLLIIAHIPTKQKTIHT
FT                   INIIPYPDNNGYQLDHIDKDTYFEEQDKIYNQNYQEINNECIKNIIKRTNPICNFVPI
FT                   TVEQIIKYVEPNSIITWNLNNTIIEQKLPRNK"
XX
CC   Sequence from BDGP, January 2002.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7318 BP; 2989 A; 1603 C; 975 G; 1751 T; 0 other;
     AGTAACATAA TATGCTTCTC ATATTACGTT TACATACTTA CACTAATTGT ACATACAATC        60
     TTGCACATGC ATAAACACAT GAAACCAGTT TACATTTTTA CTTACACTTA AGCGCATAAT       120
     TTGTTGTGCA TCCATACCGT TATTTTTCCG TTCTTTTTTG TACACATATA CTGATTAGAC       180
     ATTCCCGTTT CTCGCGACTC ACTTCGAGCC GATCAAAAAC TCTGTACAGT CAGTCTTAAG       240
     CCGACAACGA AGAAATAAAG ATCTAAACTA AAAAATACCT CGTGTTGATT CTGAAACTTC       300
     TTTAAAGGCG TTGATCTTAG TCAAACGACG GATCATTTGT TCGACTCGAA TAGTAAAATA       360
     CGTAAGTGGC GCAGTCGGTA GGATAATACA TTGTTGATGC GATAGTAACC CTATTCAATT       420
     CTTCAATTAT TATCCACAAA AGAACTAACG CAGTCGCGTC GTGCTAAGTG GAAAGTGTTA       480
     ACCAATGGTA CTCAATCCCA TAAAGTGACC ACGAAGTGAA ATAACTTAAA ATTACAAAAA       540
     TTTTAAGAAG ACGCCTTTGA ATTCGCTGAG TAGTAAATCC ACAAAAGGTT ACTCAAACCA       600
     AAGCGAAACA GCTAAGAGCG CAACACAACA AACTTAAATT AAAAACTTAC AAATAAGTGA       660
     ATAACAGAAA TATTACGAAC AAATAAGTGC GAAAATTCAA CAAAACCTAA GCTAAAGAAC       720
     TATAACTAAG TGAATAACAA ACATTATAAG TGAATTAAAT TAATAAGTGA ACAACACAAC       780
     AAACTTAAAT TAAAAACTTA CAAATAAGTG AATAACAGAA ATATTACGAA CAAATAAGTG       840
     CGAAAATTCA ACAAAACCTA AGCTAAAGAA CTATAACTAA GTGAATAACA AACATTATAA       900
     GTGAATTAAA TTAATAAGTG AACAACACAA CAAACTTAAA TTAAAAACTT ACAAATAAGT       960
     GAATAACAGA AATATTACGA ACAAATAAGT GCGAAAATTC AACAAAACCT AAGCTAAAGA      1020
     ACTATAACTA AGTGAATAAC AAACATTATA AGTGAATTAA ATTAATAAAT GAACAAACAC      1080
     AAACACAAAG CTCAGACCTG GAATACAAAC TAATAGTGGA AATCAAGAAC CCATAGTGAA      1140
     AACCAAAACC CTATCCAAAA CATAAACCTA CAGTAAAAAC TTGAACTTTA TCGAAAAACG      1200
     AAACCTATCC GAAACTGCAA ACCTTACCCA GAACGTGAAC CTTACCTAAA ACATTAAATA      1260
     ACAATAAATA CAACAACAAC AATGGCAACA GCAAGCCCTA TAATACTATC CGACTCAAAT      1320
     ATGAGTCAGG TCGAGAGACA GATAAATGCT GTCGAAATCT TCAATGGAGA CCCGAATACT      1380
     CTACATACCT TTATAACTCG CATCGACTTC ATTCTGGCCT TATACCAAAC TACTGACGAA      1440
     AGGCAGAAGT TGATAATTTA TGGACACATC GAACGCAATA TCAGCGGCGA CGTCATCCGT      1500
     ACTCTCGGGA CCAACAACTT TACCAGCTGG ATTGAACTAA GGACCAGATT GATCCTATAT      1560
     TACAAACCCC AGGCACCGAG TCATCAACTT TTGGAGGATT TTCGGAACAT TCAATACAAA      1620
     GGCAACATCA GGCAGTTTCT GGAGGAAGCC GAGAAAAGAC GACAAGTTTT AATGAGTAAG      1680
     TTAGAACTAG AAAATAACTC AGCTGAAACC GCCTTATTTA CCAGACTTAT TCAAGATAGC      1740
     ATAGAAAACT TGATCCTAAA ACTCCCTAAC CATATTCATC TAAGAATAGT TAACTGCCAA      1800
     ATCCCCGATT TAAGATCCCT TATTAATATC TTACAAGAAA AGGGTCTATA TGAACCTCAA      1860
     ACATTAAACA AAGATAACTT TAAGCCAGCT CCTAATTCTA ATAGGACGCC AAATAACTTA      1920
     CCAAATAGAC AAGTTAATGG CCAAAATAAA CCTATAACAC CTTTTCAACC GTACCATAAC      1980
     AACGTCTTTC AACCCTATTA TCCACCATAC CCATACGCAC CAATCCATAC ACCCAGGCCC      2040
     AATCAAACCC CTTTTCCCCA ATATCAACCA AGACCAACCT ACCCACAACC TAACATACCC      2100
     AGACCGAATC CTGTCTTTAA TCGACAGAAT ATCTTCGACC AAAATCGTTT CGGACCTAAT      2160
     CAAACTTACA CACCGAATAA CTTCCCTCCA ACTGGGAACA CACAAACCAA CAACCCGGTA      2220
     AAAAGACAAC GACCATCAGA CAGCGGACAG ACTAAAATGA GCATAGAAGA ACTAAGATAC      2280
     CAAGAAATGG TATCAAACCA ACCCGAATAC CCTTACCATT ATTACTATCC ATACTACCCA      2340
     GATAACTTCC AACCACAACC ATATCCTTAT CAAATGAGTT ATATCCCAGA CCCAACTCAA      2400
     ATCCCTTTCG AACAAGATCA TGACACTTCG GACAAAACAC AACAAGAACA GACAGCACCA      2460
     AACGATGACG AATCAGACAA TACCAAAGAA GCAGAAAATT TTCGGCTAGT TGCCCCGGAT      2520
     CAAACCAATA TATAATTATT AAACATAATG ACATAGACTT AAAGTGCCTA ATTGACACTG      2580
     GATCCACCAT AAACATGCTT ACTTGGAACA TTTTCGAAAC ACCTATACAA CAAACCAACC      2640
     ACCTAATTCA TACAAGTAAT GGCTCGGTAA CTATTAACGA GACCACCACT ATACCACCCA      2700
     ATAACTACTT TCCTATTGCT CAGGAGTTTC TAATTCACAA ATTCTCAGAT CATTATGATA      2760
     TGCTGATTGG ACGCAAATTG TTGTCTAAAG CTAAAGCCAT AATAGATTAT CAAAAGAAAA      2820
     CTGCCACCCT CTTCAACAAA GTCTATAAAA TAAAAGACAC TGAAAAACTT ACAGACCAAA      2880
     ATCATGCTCA AGTAGACTCT TCGTTCCCAC AAGACCCTAC CTTTTTAGAA ACCTCCACAC      2940
     TTCAGGAGAA TCTGTTCCGA CTAAACCATT TAAATGCAGA AGAAAAATAC AAATTAACAA      3000
     ACTTACTGAC AAGATTTAAA GACATTCAGT TTCACGAGGG CGACAAACTT AGCTTCACAA      3060
     ACCAAGAAAA ACATACAATT AATACCACAC ATAATATTCC AGTTTACTCT AAAATGTATA      3120
     GCTTCCAACA ATCATACGAA CAAGAAGTAG AAAGACAAAT TCAAGAAATG TTAGAACAAG      3180
     GCATCATTCG AGAAAGCAGC TCACCGTACT GCAGCCCCAT CTGGGTAGTA CCAAAAAAAT      3240
     TAGATGCTTC CGGACAGCAG AAACTTCGAA TAGTCATAGA CTACAGGAAG CTGAATGAAA      3300
     TAACAATAAA TGACCGATAC CCTATGCCAA ATATAGACGA AATACTAGGA AAATTAGGGA      3360
     GGTCTAATTA CTTTACCACC ATAGACCTGG CAAAAGGCTT CCATCAAATA GAGATGGATT      3420
     CAGAATCAAT AGCCAAAACG GCTTTCTCTA CTAAATACGG ACATTACGAA TATACTAGAA      3480
     TGCCATTTGG GCTTAAAAAC GCCCCAGCTA CCTTCCAACG CTGCATGAAT AACCTACTTC      3540
     GTCCGCTTTT AAATAAAAAT TGTTTAGTAT ATCTAGACGA TATCATTGTC TTTTCTACCT      3600
     CTCTAGAGGA ACACCTTCAA TCCCTTGAAG CAGTCTTCGA GAAATTATCT CAAGCCAACC      3660
     TTAAACTACA GCTAGATAAA TGTGAATTCC TAAGACAAGA AACTACCTTT CTAGGACACG      3720
     TTATCACTAA AGACGGAATT AAACCAAATC CCGAAAAAAT CAAAGCTATA CAAGATTACC      3780
     CACTTCCATC TAAACCTAAA GAAATTAAAG CATTCCTTGG AATCACAGGA TACTACAGGA      3840
     AATTCATACC CAACTTCTCT GACATAGCGA AACCACTGAC TAAATGTCTC AAAAAGGGAG      3900
     TAAAAATAGA TACAAAACAT AAAGAATATA TAGAAGCATT TCAAAAATTA AAATTACTTA      3960
     TTTCCGAAGA CCCCATATTA AAAATACCAA ATTTTGAAAG AAAATTTGTA TTAACAACTG      4020
     ACGCAAGCAA TGTAGCATTA GGTGCTGTTC TATCTCAAGA TGGACATCCC ATTAGCTACA      4080
     TTAGCAGGAC CCTAAACGAA CATGAAGTTA ATTACAGTGC TATAGAAAAA GAACTACTAG      4140
     CAATAGTTTG GGCCACAAAG ACCTTTAGAC ACTACCTGTT AGGACGACAT TGCGAAATAG      4200
     CTTCTGACCA TCAACCATTG TGCTGGCTAC ACAAATTAAA AGAACCTAAC TCAAAGCTGA      4260
     CTAGGTGGAA GATTAGATTA TCCGAGTACG ACTTCGATAT AAAATATATC AAAGGAAAGG      4320
     AAAACCATGT CGCAGACGCA CTGTCTAGAA TCAAAATAGA ACAAGCATTT TTCGGAGAAT      4380
     CTACGCAACA TAGCGCAGAA GAAGATAATA GCGACTTAAT AGGGTTGTCC GAAAAAGCCA      4440
     TTAATTACCA TAAAAGACAA ATTATTTTCT CAAAAGGTCC CAATAGTAGT ATAGAACACG      4500
     AAACTTATTT CAAAAAACAA ATCATACACA TTTCCTACAA AGAAATGACC CTAGAAGCAG      4560
     CCAAACAATA TCTACTCAAT CACTTTTGCT CAAAGAATAG CGCTCTTTAC ATCGAAAGCG      4620
     ATGCAGACTT CGAAATGATC CAAAATGCAT ACACAACAAC AATGAATCCG AAATGTACAA      4680
     AAATTTTCCG AAGCCTCGTT TTATTAAAAA ACATCCCTAC TTATGCAAGT TTTAAGGAAC      4740
     TAATTCTAAA CACCCACGAA AAGCTCTTAC ACCCCGGAAT TCAAAAAACT GTAAAACTCT      4800
     TTAGTGAGAA TTATTACTTC CCCAATAGCC AACTCCTTAT CCAGAATATA ATCAACGAAT      4860
     GTCAAGTCTG CAACCTAGCC AAAACAGAAC ACCGTAACAC GGAAATGCCA ATGAAAATTA      4920
     CCCCTAAACC CGAACATTGT CGTGATAAGT TCGTAATAGA CATCTATTCT TCCGAAGGAA      4980
     ACCATTATCT GAGCTGTATC GATATTTACT CTAAATTCGC CACCCTTGAA CAGATTAAGA      5040
     CAAAAGACTG GGTAGAATGC AAAAATGCCT TAATGCGCAT ATTTAATCAA TTAGGGAAAC      5100
     CTAAACTTCT CAAAGCAGAT CGAGATGGTG ATTCTCCAGC CTAGCCCTCA AACGTTGGCT      5160
     CGAAACCGAA GAAGTAGAGT TACAACTTAA TACTACAAAA ACAGGTGCGC TGACATAGAG      5220
     AGACTCCACA AAACTATAAA CGAAAAAATC CGCATCATAA AAAACTCTGA CGACAACGAG      5280
     ACCAAATTAA GTAAAATAGA AACAATCCTT TACATTTACA ACCACAAGAC CAAACACGAT      5340
     ACTACCGGAC AAACCCCTGC TCACATATTC ATTTACGCCG GACAACCTAA CTTAGATACA      5400
     CAAAACAATA AAGAGAAAAA AAATTAACGA AATAAATAAG AATAGAACTG AATATAATGT      5460
     CGACACCAGA TACAGAAAAG GACCATTACA AAAAGGAAAA TTAGAAGCCC CTTTCAAATT      5520
     AACAAAGAAC GTCGAACAAA CCGACGAAGA CCATTACAAA ATTACTAACA GAAACAGAGA      5580
     GACACATTAC TATAAGACCC AATTTAAAAA ACAGAAGAAA ACTAATCAAC TCCCCATTTT      5640
     ACAGGCCCCT TGTTCACCAT AATACTTTTT CTTACTCTGA CAAACCTATT CAAATCCCTT      5700
     CAGAATACGA ACACCACTGT CTCCGCATAA ACCTCTTGGA TATAGACAAC CTAACTCACT      5760
     ATTTTAACAC TAAAGTAACC AACTATACAC ATATCCCCCA AATTAAACTT CTACACAATA      5820
     AAATGTTAAG GGAACTTAAC GCTATAACGT TACACCAGAC AAATAGACAG AAACGCGGAC      5880
     TAATCAACAT AATGGGATCT GCATTTAAAT ACCTTTTCGG GACACTAGAC AATAACGACC      5940
     GGATACAAAT TCATAACCAA TTAGAGTCCG CGACAAACAA CTCAATTAAC ATACACGAAA      6000
     TGAGCGACAT AATTCAACTT ATCAATAGTA ACATGCAAAA GATCAAAGAA TTTGAAGACG      6060
     AACATAATAA CAGAGAACAA ATGCTATACG AACTAATACA ATTTACCGAA TACATTGAAG      6120
     ACATCGCAAT GGGAATGCAA CTCTCACGAC TAGGACTGTT TAACCCAAAA TTACTTAACT      6180
     ATGACAAATT AGAAAACGTT GACAGTAGCA ACATACTACA GACTAAAACC TCAACCTGGA      6240
     TCAACACTAA CCAACTACTT ATCATAGCTC ATATCCCTAC TAAACAAAAA ACCATTCATA      6300
     CTATTAACAT AATACCCTAT CCAGATAATA ATGGCTATCA ACTTGATCAT ATAGACAAAG      6360
     ACACTTATTT CGAAGAACAA GATAAAATTT ATAACCAGAA CTATCAAGAA ATTAACAACG      6420
     AATGTATCAA AAATATTATT AAGAGAACAA ATCCAATATG TAACTTTGTC CCTATAACAG      6480
     TCGAACAAAT AATTAAGTAT GTAGAACCAA ATAGTATCAT CACTTGGAAT CTAAACAACA      6540
     CTATCATAGA ACAAAAATTG CCAAGAAATA AATAAAAATG TAACGGTTAA CGGCAACAAA      6600
     ATAATAACAA TAAAACAATG TAAAATCAAA ATAGGAAACA TAATACTTAA CGAAAACAAG      6660
     CTAAAAACCC CGAGATAAAC CTTACCCCAT TGTACACACC CTTAAGCCTA ATAAAAATAA      6720
     AACCAATAGA ACATAAGGAC ATTGTACAAT TAATATCAAA TAATAATATC ACAGTTTGTA      6780
     TAGTAGTATC AATCATAAGC CTCACATCTT GTATTGCTTG TATTTACTTA AAACTAAAAA      6840
     ACAAAATAAT CCTTGAATCA CAAGATGCAA ATCCAACTGC ATCACCAAGA TTGCGGGCAT      6900
     CAACACCAAT AGAAGGAGTG GAAGCATAAG CTTCCCTTTT AAAGGGAGGG AAGTAACATA      6960
     ATATGCTTCT CATATTACGT TTACATACTT ACACTAATTG TACATACAAT CTTGCACATG      7020
     CATAAACACA TGAAACCAGT TTACATTTTT ACTTACACTT AAGCGCATAA TTTGTTGTGC      7080
     ATCCATACCG TTATTTTTCC GTTCTTTTTT GTACACATAT ACTGATTAGA CATTCCCGTT      7140
     TCTCGCGACT CACTTCGAGC CGATCAAAAA CTCTGTACAG TCAGTCTTAA GCCGACAACG      7200
     AAGAAATAAA GATCTAAACT AAAAAATACC TCGTGTTGAT TCTGAAACTT CTTTAAAGGC      7260
     GTTGATCTTA GTCAAACGAC GGATCATTTG TTCGACTCGA ATAGTAAAAT ACGTAAGT        7318
//
ID   DMTOM1_LTR standard; DNA; INV; 410 BP.
XX
AC   nnnnnnnn;
DR   FLYBASE; FBgn0063450; Tom1.
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 410 BP; 136 A; 98 C; 60 G; 115 T; 1 other;
     agtaacgtaa ttatgccttc ctcataattc acttatacaa aagaccgacc gcggtggtcc        60
     gccgtatyga ttcctcgtta aataaacaaa catttctcga tattgcgcat ccactcaagc       120
     cgtaatcaaa acccagccac taggcaggca catagccacg tagcacataa gaattctttt       180
     tcatatgtat gcacataagc ataagcaaga agcgctctcg cgcagatcaa gtaaacaacc       240
     cactaaccca gtacatctaa gattttctca caccaattgt ttcagtctta agctgatatt       300
     caatcaataa aaacgcaaag cggattcatt cggagttttt atttatttcg gcgttgatct       360
     tagttcaaat acggatcatt tattcgactc aaaacaaaaa ctattttact                  410
//
ID   G5_DM     standard; DNA; INV;  4856 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063504; G5.
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 4856 BP; 1320 A; 1338 C; 1088 G; 1110 T; 0 other;
     acttcgtttc gcagttgcga taagccggac gcgtttttgg tgcagtgaca cagtttggtt        60
     taacaaattt acggacaagt ccacaactgt ggcacgaagt gtagtgatcg agaacataat       120
     caaattatgt gttggcaagt gaaagtgtgg cgacttttgc tagccagcgt cgcttttctt       180
     tacttggtga ggctggctca agactcactg aaaaacttca cgaggcgatc agctgtgagt       240
     gctttaagct gtaagagctt taagccctgg ctgtttcgtg tccacggtac actactactt       300
     tcaaaccgcg atcttcaaga tctatctggg tcgtgtctta gatactctgc cgctaaaact       360
     ttaagcttct agctggttcg agtcgtcgct aagcattttt ctttttgaaa atggataacg       420
     gtccacagca aaaatctatc gactacgagt cgatgatgct aattgctggc gcgggcccaa       480
     aagagatacg ggagcaaatg aaaaagagct ggaaaagtga aactccagcc tctgctacta       540
     ccggtatttc aaacacctac tgcagttcga ccttcacact gacctccacc agttcgacta       600
     tctcgtctgc gtacatcttc acctcctcct tgagcggcaa catatgctct actgctgcca       660
     gtacaattca caaaagtgca tctgtcagct caatcgcgaa gccacaactt gccaccggct       720
     ggcacgacgt ctcctttaaa tcaagaaatg gtggaatcaa aaagagagca ggcgcagtct       780
     tctcccctaa aatggcaaaa aaggttgcaa ctgatatgcc ggcaaaaatc tctgccaatt       840
     gcttccaagt cctaagcgac gatgaagata tggtcgtggg agaggcatct tcgagtgacg       900
     acgacgagcc atgctcctcg aataccgccc tcaaacgtgc cgcaaggaaa gcaggaccaa       960
     aacaacagct gaaaggtgct caccaaactg taccagccgc cccgaaatca agccgtcact      1020
     ctaaggtgcc tagaatgatg tttcccaatg tggttaactt cacagcattt cgcagcgagc      1080
     tggacgccct tgtgggcgac tcctatacaa ttaaggtcct aaattcggga gactgcgctg      1140
     ttcagtgcaa ctcccctgat agctacaggc tggtggcccg gcactttctc gacaaaggat      1200
     ctctttttca tcaccatcag ctaccggagg accgacccta caaaatagtc atgcgcaaca      1260
     ttcaccacgg agtcccatcg gaggatatca tcgcaaccct ccagaacgaa ggacataacg      1320
     ttgtacggat ttatacccct cgcaacaagg caacctctct tcctcttaat atgaggttca      1380
     ttgacctcaa aaaggcggag aacaacaacc aaataaaggg catatctgtt gtctgcaggc      1440
     acagggtaat atgggagaaa ccccgtaagc aatcggagcc gattcaatgc cacaggtgcc      1500
     aaggctatgg tcataccaag gcatattgtt ctcggcacta catatgcaga gaatgcggag      1560
     aaaatcaccc cactgcagag tgcaagctgg aacaggacga ggccagattc tgctttcact      1620
     gtggtggccc ccatgcagcc aactttaaag gttgcaaaaa gtacctgcta gaggcttcta      1680
     accgcaaaaa ccaacggaag gtcaatgaac cctctggttc tggtcctgca agaggaccac      1740
     accaaccctg tccaccagcc cacatgtctg gaaagccttc atttgcaaat tttgtcagag      1800
     gaagtcagcc cgtcgccaag cctgccgtta ttgtccccca tgcaagcgct aaccttgagt      1860
     ccaagctgga gcagctgttt attaggcttg acaggatgat gtcactagtt gaaacgctaa      1920
     tgcaactgct cctgcaaact cgcaccttcc cttctgctgc tcaaaatggg tcctcttaag      1980
     gtagcagctt ggaatgccaa tggggcctcc tcgaagacca atgagattct cgccttcatc      2040
     gagcttcacg aaatcgacat cctcctgctg tcggaaaccc atttcgtttc ccggtccacc      2100
     ttcagagttc ctggctttac cctccacact gccaaccacc cggatgacag caaacgcgga      2160
     ggtgcggcga tccttatcag atcactcatc tcccacctac ccttctccac cctgtcggaa      2220
     aatcacatcc agacagcagt tatccagctg acggcaagca ggggtacttt taacattgcc      2280
     tcagtatact gccctcctaa tctcaggtgg acggaggctg acgtcgagct gatcatcgct      2340
     caatttggca caaagttcct tgcggcaggt gactggaacg caaagcacag atggtgggga      2400
     aactacagga tgtgcactag aggcagggtg ctgttctctg ctctggcggg cgaaggtatc      2460
     gacatcgttg caactggaga agctacttgc tatccctttc gagcaagtgc cactccaagt      2520
     gccatcgatt tcgggatctc caaaggattc agacagcaag aaatcaacgt gcaactactg      2580
     acagaactgt catctgacca tctccccctg ctgtttgagc tggatgaaga cgcccagcta      2640
     ttcaaaggtg tcacaaaaat gctgtcacct actgcaaata ctgtggcctt caaggagcac      2700
     attgaggcca cagtagatct caacatcccc atagacacct gcaatagtct ggaagcgtat      2760
     gtagattacc tcgcagccac aatcgcggaa gcagcacgga gggccacacc tcccccacat      2820
     caagctcgtc acacgaccgc aaggagggct cccatcttga gcttggaagc cagggagctg      2880
     ctctcccaca aaaggcgcct caggagacgg tacatcgcaa caggagatcc tagcattaag      2940
     cagctatact ctagcaccac taacaaactg caccgtttgc tagccaggac gcgacgagaa      3000
     aatctggata ccctgctgga gggtactggc ccagataaca acagccattt ttcgttatgg      3060
     aggctcacaa gaggtatcaa gagacagccg ttgtttcaat ctcctgtcca gagtcacagt      3120
     ggcctctggc ttaagacgga cgatgaaaaa gcgagggcat ttgcttcgca cctgacctcc      3180
     accttcatgc ccttcaacct aacagacgac tcaaatcgcg tagccatcat taattttctg      3240
     gacactccga ctgcaccggc tcgccccatt aggcatacca caccgcagga agtcataatg      3300
     cagctgaagg cgctgcaaat caagaaaacc cctggttacg atggcattga caaccgtgct      3360
     gcgaagtctc tgccacgcaa aggagtccta gccttagtaa aaatatttaa tgccatgcta      3420
     aggctagggc actttccaag gcaatggaag cgtgcacgta tcatcatgat acctaaagcc      3480
     ggaaagccgc caacgaagat cgatgcatat cgcccaatca gcttgctatc aactttcttc      3540
     aagatttttg agagaatact cctagcccgc ctgatggaac tgccgcaagt agtgaaccac      3600
     atacctcgac accaatttgg cttcaggaag tcccacggct gccctgaaca aatacatcga      3660
     ctggtaaacc aggtgacgca tggcttcgag cacaaactct acacggtcgg cgtctttcta      3720
     gacgtgaagc aagcgtttga cagggtgtgg catgagggcc ttctatacaa gatgaaagct      3780
     ctccttcctg ctccctacta tgccatcctg agatcgttca tctctcatcg gactttcgac      3840
     gttgcagtgc gtgatgctcg gtccagcctg gaagagattc acgcaggagt tccacaggga      3900
     agtgttcttg ggcccttcct gtacaccctg tacactgccg acctgccatc tcccgccaac      3960
     aacaccgaag tctccccgga tcagctgctc ctggccactt atgccgatga caccgccatg      4020
     ctggcgtctc atcctgtact gcaaactgcc tccaacgcag tccaggaatg gctgcatgca      4080
     gtcgaaaaat ggactgccaa atggaatgtg gccattaact cctcgaagtc agcctgtgta      4140
     acttttaccc tgcggcccgg aacttgcaca gatctgactt ttgatggaaa ccccatcaac      4200
     aatgtcacat cgcactgcta cctaggagtt catctagatc ggagactgac ctggagggcc      4260
     cacatcacgt cggtcaaatt caagtcactg gcgaagctaa aaaagctcga ctggctcttc      4320
     cactccagta aactacaaat gagctctaag gctcttttaa tcaaagccat acttgctcca      4380
     acgtggagtt atgccatcca ggtgtgggga actgccgcca aatcccagct caataggctc      4440
     cgtgtggtcc agtcgagagc tgcacgtcac gcatctgggc tcccctggta cgtgacgaac      4500
     caggtaatcg aaagagatct gaaagttacc cctcttgggg atcagattaa ttttcacagc      4560
     agccgttatg ccgacaggct tatggtccac ccgaaccgac tagcaaatat cctagctaat      4620
     cccatctccc tccgaaggct gaagagggta caccccaccg atctccctac ccggaggata      4680
     gtataaaata ttacacatta agtaattaat aactagaaaa atttttcctt ttctacttaa      4740
     taattaagaa accacttggt ctcatataca tttatacaca caataggtta agttcagagg      4800
     aattgactga acgattcctt ttggatccaa aataaataga atgattattt aaaaaa          4856
//
ID   G4_DM     standard; DNA; INV;  3856 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063505; G4.
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 3856 BP; 1447 A; 760 C; 655 G; 993 T; 1 other;
     cgaagttcaa agaaaaaaga attccctgga caattcatca agcaccagcg caaataaatt        60
     cgctctctta agcgacggat tgcccgacaa aacaggaaac aaatataaca aaaacgaaga       120
     tctcgaaatg gtaaatgaag acagcgcaac tgattctgct aagcccccac ctatcattct       180
     gtctgacgtc aatgatataa gtgaaatgct agcctatctt aattctaaaa ttaaaagaga       240
     acttttttat tataagactc aacgttatgg acatgtaaga gtaatggtta aaagtattga       300
     agaattcaga aaattagtca aaacacttaa taatgattgt gtgcagtacc acacatacca       360
     gcttaaggat gacagagcat ttagagttgt tattaagaat ttgcattttt ccacaaattt       420
     agatgaaatt aaaagtgatg aagagtcaaa aggtcatgtt gttagaaaca taagtaatct       480
     taaaagccgt gcgaccaaaa cgccactgaa catgttctat gtagatattg agcctaacaa       540
     caaaaaccga gacaatgtaa aacacatagg taacgctatt gtcaatattg agcctccccg       600
     caaaaacaat gaaatcgttc aatgctatcg ctgccaggaa ttcggacata ctaaatcata       660
     ttgtaccaaa acgtaccgct gtgtaaaatc ctcttctcga cacccaagca acatctgccc       720
     gaaaaataca gaacaaccag caaaatgtgc caactgctac gaagaacacg ccgccagcta       780
     caaagggtgt agaatttatc aggaactctt gtccaaaaaa atcagctacc aatcgaaaat       840
     ccctgaatag caataaagac ctgagtaaaa atgatttagg aatccagcaa agtttgctcc       900
     gcctaacaag ccaacatata cccaacaaag taacgattat caatcttatg cccaaattgc       960
     tgcaggaaat agcaaaacaa acacatcact ggagagaata gagcaactat tagaaaaaca      1020
     gtctgaactt acaaataatt tacttaacat gataatgtta cttgtaaaca aattatgcaa      1080
     gtaaatctta accttggaat atggaatggc aatgggctkt ccagccatgt aaatgaaata      1140
     tctttataaa aacgaatgaa attgatatta tgttaatttc cgagacacac tttaccagca      1200
     aaccatatat catggttgtt ggatatgata taattagagc tgaccaccgt tccttttaat      1260
     tagacctttt aattagacgg ctaaaattag acggcctaaa atttcaaatt atggacagca      1320
     ttagagaaaa tgctatgcag gctgccacgg tcacgatcaa atgtatgcat gcggacgtat      1380
     ctgtaacagc aatttatctt cccccaagat ttgctctcaa agaagcagat tttaagaact      1440
     tttttcaaaa acttggacca cagtttatat tgagaggcga cttcaatgat aagcacccct      1500
     ggtggggctc cagattgaca aatccgaagg gaagcgaact gtacaaatgc atagtaaaca      1560
     atagcataac aacattttca accggcaagc ctacatactg gcctactaat agtagaaaga      1620
     taccaaactt aaaagacttc gtagcatact ttggaatccc agaatctcac atgcgaataa      1680
     tggaaagttt tgatctaagc tcagatcatt ctctaataat agtgacatac agtacagtag      1740
     ctcatatatt gacaaaacca tacaaagtaa tttctgcaaa tacagatatc aatgcattta      1800
     aaagttatct ggaaacagat aagatagacc atgctgtgga gctactcaca gaacaagata      1860
     aagtaagcta tatatgtacg aagctaccag ccagaaactc acaatcaaat cagctctatc      1920
     tctcagctga aatccgacaa caaatacaac acaagagaaa tttgcgtaaa agatggcaag      1980
     aaactctcta ccctgccgac aaaagatcgt ataacaaggc tgcatctgat ctcaaaaaac      2040
     tactgtcaac tttaagaaat gaatctctcg ctgaatatct tagaaatcta gatccacatt      2100
     cttgtaacca cgaacataat ttatggagag caaccaaata tctcaagcga cctgcaaaaa      2160
     gaaacacagt agtccgaaac tgtaatggcg aatggtgtag atctgatgat gaacaagcca      2220
     aagcatttgc tcaacacctg cactctgtat ttcagccaaa tgatattgat aacccgcaaa      2280
     cagaaagaga agtagataac tttctcgagt caccctgcca aatgagctta cccattcgta      2340
     aaatcagtat taatgaagtt tcatcagaaa ttaaatggct gaatagtaaa aaggctccag      2400
     gttcggacaa aatagatggc ataaccttga aaattctacc accaaagtgt gtacgatttc      2460
     taacgtttat atttaatgcg atgttaagag ttgaccactt cccaagccaa tggaaatgtg      2520
     cagaaattat aatgatcctt aaaccaaaca aggcagaaaa tgaagtgaca tcgtaccgtc      2580
     ccattagttt gttgtcaata ttttctaaag tatttgaaaa aatactttta aagagaatgt      2640
     tgccaatctt ggacgaattc gctatcatac ccgaacacca gtttggattc agaagaggcc      2700
     acggaacccc tgagcaatgt cacaggatta taaatgaaat tttgtcagca tttgagagca      2760
     aaaaatactg cactgcaaca tttcttgacg ttcaacaagc gtttgatcga gtctggcatg      2820
     acggcttatt atataaaatc aaaaagtggt tacctgcacc atatttttta ttattaaagt      2880
     catacttaac caatagacac ttttatgtgc aacaaaaaaa tgaatactcg cccttgcatt      2940
     ttataaaagc tggagtccca caaggaagcg tcttaggacc tgtcttatac accctgtaca      3000
     cggcagatat gccggtaaca aatacctgca ctgtggcaac atacgcggat gatacagcta      3060
     tattagctac cagctcatct aaagaggaag cctcacaact cctgcaagca gagctacgcc      3120
     ttattgaaag ctggtttctt ctttggaaaa ttaaagtcaa cgccctgaaa tctgcgcaaa      3180
     taacttttgc attaagaaga ggtgactgcc cagaagtgtc atttaatgga tcagcaatcc      3240
     cacaaagtaa ttgcataaag taccttggct tgcacctcga tcgcagacta acgtggaaaa      3300
     accacataaa agcaaagcgc cagcaactaa atcaaaaaag tttgaagatg acctggttgc      3360
     ttggccgaaa atctgcaacc actctggaaa ataaagtccg tttatacaaa gctatactaa      3420
     agcccgtgtg gacttatggc atacagctct ggggtactgc cagcaactca aatattgaga      3480
     ttctacaacg ctaccaatca aaaatattaa gacaaattgt taatgctcca ttttatattt      3540
     caaatgcaag tatccataaa gacttaggaa tcccttatgt taaagaagaa atagcaaaac      3600
     atagtaaaaa atatatagac agactaagaa cacatgaaaa taacttagcc ttaagtttgg      3660
     taaataataa taacaacgtc agaagactta aaagatttca cgtgctagat ctccccgaca      3720
     ggtattaagt attaaaacat gttatgcata gagtatgtag tagggattaa tggataacta      3780
     ctgcctctgt taatttaaga ttaattataa aatttactta ttgtcatact tttttaagac      3840
     agattgtaaa taaaaa                                                      3856
//
ID   ROOA_LTR  standard; DNA; INV; 7621 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063394; rooA.
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled by Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 7621 BP; 2712 A; 1444 C; 1652 G; 1808 T; 5 other;
     TGTCTAAATA TGTGTTTAGA CATGATAAGT AGGCAAACTA TAAAAATGTT CTATTTATGG        60
     GCTGCAATAA ACATGTCACy GGACAGCATA AGTGGCAACT ACAGATAAGT ACGATTGCAG       120
     CGGCCTATTG CCGAAGTGTC AAGAGATATG ACCAyGCGGG AGGTGATTAG CGCGGTCATA       180
     GTCCTCAAAC ATAGATTTAA GAATAAAACT CAGCTGCATT TACCAACGCA GACTGCGGCG       240
     TCTTACAAGC GCTGCATTAT ATAATTAGAT GATAAGAACC TATGTAAGAA TGAATAAAAG       300
     GCGAAGCCCT CGCAGTAGCG AGTCAGTTAG ATTCAAACAC CCGAATTGAA CTCATTAAGT       360
     GTACGCACAA GTTTATAGTG TGAACATTTT CGTCCTTTCG AGAAATTCTG TTGTTTTCCT       420
     CCACCAGTGG TAAGAAACAC AGAAGAAAAA ACCAGCGCTT CAAAGTAAAA AGAGCAAGGT       480
     TATTCGAGTG ATTCTGTTGT TTCCCCCACC AGTGGTAAGA AACACAGAAT AAAAGACCAC       540
     GCCTTAAAGT ACTAGGACTA TAAGGTGAAA CATTGTGTTC GTGCTTTTCC TTGGCTGATC       600
     AATCAGCTGT GAGTCGAGGC ACAGCTAGGT CAACTGGGCG ACCAATCAAA AAATACTCCA       660
     ACGGATCACG CCAAAGAATA CAAGCAGAAA GCACAAAAAA GTCACAGTGA TTGTTTTCCC       720
     AAGATGTTGT CGGAAAGAAC TGTGAAATTG ATGCAAGAAC AAGGAGAGCT GCAGAACAAA       780
     ATACTGCAAG CCATCAAGGA AAAGGCATCT ATACCAGCAA TAGAAGTATT GGTAGTCCGA       840
     TTTACTACTA ACAACAATGC GCTGGTAAAA TTGGGAGTTG GCGATCATCA ATATTTTAAT       900
     GATAAAATAT TTATTAAAAC TATGGATGCT ATCAAGGGCT ACAAGGAGTC ACAATTAAAG       960
     GTAAAAACAC TTGAAGGGAT AAATATACCA AGCGGATCTA AATTATCTGA TACCGCATCA      1020
     GCTCGGAGCT CCAGTCCAGT TGATAATCTG GTTCAACTGG TGGATAGAAG AGCGGACAGG      1080
     GTGAGGCAAC AGATGAGCCT AATCTACGAA ACCCTAGTGA GATTGAACTA GTCAAGCAGC      1140
     TGGCAATATG AAAAGTCATT GGTCCAACGT GACGTACACA TGTAAACAAG TATGACACAG      1200
     AACTGCCTTT GATCAAGATG AGGCAGACAT TCTGCAATCT AAAGTTGCCG CACTGGTACT      1260
     TCAAATGAAG TTGGAACAGT TCAAAAGTTC CAACTACGAC GTGCCAGAAC TCCCAAAAGT      1320
     GGACCTTCCA ACATTCAATG GAAATGCGAA GGAATGGCCA TCATTTTACG AGCTAATAGA      1380
     CAGCAGGAAG GATCTCAGCA ACACAAGGAA GCTGGGATAT TTAAGAGCCT GCTTAAAAGG      1440
     AGAAGCTCAA ATGGTGGTTA GCCATTTGAT AACGGGATCA GCGGCTAGCT ATACAGCAGC      1500
     GTGGGAGCTT ATCTGCAAAC GCTATGAGAA TAGCAGAAAA ATATTCTCCC AACACTTCAA      1560
     CAAATTAATG GAACTGGAGT GCTTGCTGCC CCATGATGAG AAAAATTTAA GGAAGTTTTT      1620
     GGATACTGCG ACCGAGAGCA TATTCATCAT AAAGGAAAAA GGAAAAATAG AAAGCTCTGC      1680
     TGACGTAATT TTAGCAGAAA ATTTTCGCCA GATGCCATTC AGCTGTATGA ACAGCATGTA      1740
     AAAAAGGCAA GAGCGTCCTT ACAAGACGTA CTGGAGTTTA TTGAGCAACA ATACAACTCA      1800
     GTAAATGCCA TTACCAAAAA TACCGCTCAG CTTGCTACAA GAAAAGTGCA AGTTAGATCG      1860
     TGTGCCTTTT GCTCTAAGGA TGGCCACGAT ATGATAAAGT GTCTCAAATT CAAAGCACAA      1920
     TCAATCGAAA AAAGAAAAGA ATTCGTTCAA AAGAACAGTA TGTGCTTAAG ATGCTTTGGA      1980
     AAGCATAATG CTATCGACTG CAGAAAGGAA ATTACATGCA ATCGATGCTC CAAAGGGCAC      2040
     AACAGCCTTC TTCATGAAGA CACAAAACGC AGTATCAACA GCAATAGCCT CAAGCAAGGC      2100
     CAAGACACAC TATTGGCTAC AGCTGTTGTT TTAGTGAAAA ACAAAGCTGG AGGTTACAAC      2160
     GAGTTGAGGG CGCTTATTGA CGGTGGATCC CAGAAGACGC TGATTTCAGA GGAGGCAGCA      2220
     CAAATATTAA GGATTCCCAG AGTAAGGAAT ACTATAGAGG TCGAAGGTAT CTCCCAGACT      2280
     ACTCAATTAT CAAAAAATTG CGACCACCTG ACGATCAAAA AAAATATTCC AAGCAGCTTC      2340
     AAAACATCAA CGGAAGCATT GGTTTTACCG ACACTCCATA GAGCCCTTCC CAGCAAAATG      2400
     TTTGATATTG ATATCAACAA AGAGTGGAAG GGCTACAGGC TAGCAGATCC AAGATTCAAC      2460
     GAGCCAAGCA GAATTGACAT GGTGATAGGT GTGGATCTAT TTCCCCTGAT TATGATGGAG      2520
     AAAATAAAAA CCGTGAATGG AATCTTGGGA CAAAAAACCA GATTTGGATG GATTGTGTCC      2580
     GGAAACATAA CTCGAGCAGC AAAGCAAAAA ATTATAAGTG CCACTACAAC AATAAATCTA      2640
     AAGGACCTGG AACGCTTTTG GGAATTGGAA GATGAAGCCG ATGAGACGAT TACAGACAAT      2700
     GCAGAATGCG AAAGAAAATT CCAAGAAACA ACTGTCACCA ACGAGGAAGG CAGATTTGTG      2760
     GTTTCAATTC CATTCCACCA ATTACACCAC AAAGAGGCAA AGCTGGGAGA CTCTCGCAAA      2820
     CAGGCAATGG CAAGGCTTAT GCAAATGGAA AAGAAGAATC GGGCTGCATA CAACGAATTT      2880
     TTCAAAGAAA CCCTTAAGAT GGGACATTTG GAATCTGTAA AGACAACGGG TCAAGGTAAA      2940
     TACTATTTAC CCCATCAAGC AATCATCAGG CCTGGAAGCT TAACTACGAA GCTACGAGTA      3000
     GTTTTTGACG CATCCGCAAA GACGACAAAT GGACTAAGCC TAAATGACGT TATTATAGCT      3060
     GGTCCTAAGA TTCAAAAGGA TATATTCGAT ATTCTAATTA ATTGGCGCAA GTGGCAATAT      3120
     GTTATGGTAG CTGACATTGA AAAATCGTAT CGCCAAATAA AGGTTGCTGA GAAAGACCAA      3180
     GAATACCAAT ATATCCTATG GAGAGATGAT CCAAAATTGC CGATCAGTGA GTTTAAGTTA      3240
     ACAACCGTAA CTTATGGCAC ATCGGCAGCA CCTTTCTTAG CAGTCCGATG TCTACGAGAG      3300
     TTGGCAGATC GCTTTTGCCA AGAGGATAGC GTCTTAGCAG AAACAATTAG AGACGACTTT      3360
     TATATGGATG ACATCATAAC TGGTGGAGAC ACAGTCAATG AGTGCTACGA ACTTCAAAGG      3420
     AAATCGAGAC AAGTGATGGA GAAGGTCGGC ATGCATCTGC GAAAATGGGT TGCAAATGAC      3480
     GAACGTATTT TAGCTGACAT TCAGGACGAC GGTGCTATGG AGAAAATCTG CATTGAGGAG      3540
     AATGAATCGA TCAAAACCTT AGGACTTCAA TGGGATCCGA AGAAGGATAC GTTTACGTTT      3600
     TTGGCAGAAA ACCCAATGCT AACACGCATA ACAAAGCGGT TAGTGTTATC ACAGTTGTCC      3660
     AGAATTTTCG ACCCACTAGG ATGGTTGGCA CCTGTAACGA TTCAAGGCAA ATGTTTCATT      3720
     CAGGAACTGT GGAAGTTACC GATGACTTGG GACGTTGAAT TGGAATCCAA CTTAGCTAAC      3780
     TGGTGGATGG AATATGCTAA AGGTCTATCA TATTTAGAAG AAATTAGCAT TTCACGCTGG      3840
     ACTGGATGCT CCAAAGGTAT TATGGAGCTA CATGGATTCT GCGATGCATC AGAGAAAGCA      3900
     TATGCAGCGG CTGTGTATAC AAAAGTAGGC GGCAGAGTTA CTTTGCTAGC AGCAAAAAGC      3960
     AAAGTAAATC CTATAAAAAA CAGGAAAACA ATTCCAAAGT TGGAATTATG TGCTGCGCAT      4020
     TTATTAGCAA AGTTATTAGC GAAAGTGCAG GCTATATGGA GCAACAAGAT CACAACGCAT      4080
     GCATGGAGTG ATTCGCAAAT TACTATTGCT TGGATACCGA ACAAGCGCAG CAAAGATAAA      4140
     TTCGTCAGAA CTAGAGAGGA AGAAATTAAT AAACTAATTC CCAATGTCAA ATGGAATTAC      4200
     GTTAAATCGA AAGACAATCC AGCAGACGTG GCTTCAAGAG GGATATCACC GCAAGCTCTT      4260
     AAAATCTGTG AAATTTGGTG GAGAGGGCCG AATTGGCTAG CTATAGATGC ACAACACTGG      4320
     CCCACTCAAA AGGAATCGGA AATTGTTGTG GTATCCACAT TGATAAAATC CGAATATCTG      4380
     CAAAATCATC TTTTATCGAA GTATTCATCG ATCGACAAAC TTCTTAGAGT AATGGCGTAT      4440
     GTATTACGCT TCATAACAAA GCTGAGAGGA AAATCGCAAC AGCCGTCACA TCTTACGGCA      4500
     GAGGAATTAA AGCTAGCAAA GATTGCCGTG GTAAAGATAC AACAACAGCT GGATTTTGGA      4560
     CACGAAGTCA GACTACTCAA AAACAAAAGA CCATTAGACC CAAAGAGTAA GTTACAGGCG      4620
     CTAAATCCGT TTTTGGATAG TGATGGCGTA CTTCGAGTTG GTGGACGATT ACAAAACGCA      4680
     ATGATACCCT ATAATGTAAA ACATCCAATT ATACTGGACA AGTCACATTT GACTTGGTTA      4740
     ATTGCAAAGG ATGCTCATAA AGAAACTCTG CATGGCGGAA TTAACATTAT GAGAACTTAT      4800
     ATTCAGAGGG AGTTCTGGAT ATTTGGCATA CAAAATTCCT TAAAGAAATA TTTAAGGGAA      4860
     TGTATTGTAT GCATACGATA CAAGCAAGAG ATGTCCAGTC AACTGATGGG AAATTTACCA      4920
     GTTTACCGAG TAACGACTGA TTACTCGTTT CAAAATACTG GAATCGACTA CGCCAGACCG      4980
     TTCCAGATTC GCTGCTCAAA GGCAAGAGGT CAAAAAACGT ATAAAGGATA CATTTGTGTA      5040
     TTTGTTTGTA TGGCAACAAA AGCAATACAT CTGGAAGCTG TTAGCGACCT TTCGTCAGAC      5100
     AAATTCCTGG AGGCTCTTCG ACGGTTCTTT GCAAGACGAG GCAAGAGTGA GAACCTATAC      5160
     TCAGATAATG GAACAAACTT CGTGGGAGCT TCAAGAGTAT TGGACAAAGA ATTTGTAGCT      5220
     GCCATTAAAA ACAATAATGA GTTAGCACCT ACTCTAGAAA AAGAAGGCAT CAAGTGGCAC      5280
     TTTATTCCCA CGGGAAGCCC CCACATGGGA TGTTTATCGG AATCCGGTGT AAAATCAGTG      5340
     AAGCATCACC TTAAACGAGT TATTTGTGAA AACAGCTTTA CATATGAAGA ATTTGCATCG      5400
     TTGCTATGTC AAATCGAAGC AGTGCTAAAC TCGCGTCCAT TAGTCACTGT AAGGAGCGAA      5460
     AACGATGGTC AGTACATATT ACCGCCGGGT CATTTTCTGG TGGGAAGACC TCTAATTGGA      5520
     GCTCCTGAAC ATTTTGGAGA AAGTAAGACA ATCAGCTCTT TGGATAGATG GAAGCTTATT      5580
     CAACGCATCA GAGGTGATTT TTGGAAGAAA TGGAAAGAGG AGTATCTGGT GTCATTGCAA      5640
     CAGCGAACCA AATGGCGCCA AGAAAAGCCA AATCTGAAGG AGGGACAGCT GGTTCTTATA      5700
     AAACATGAGA ACACTCACCC TGCAAGATGG CCTGCATAAA ACAATCAGAG GACTTCCTGG      5760
     GAGACTTCAA GGACTACTGC GATTTCTTCG GCACCACAAT ACGGACAAAA ATTGACAACA      5820
     TCAAAGAAAA AGACAAAATA CTACGGCACC GTACCAACCG AAAGAAAAGG TTTATACTGT      5880
     TCTTTGATAT CGGAAATGCA AATAGAATAC AGGAAAATAT GCAAGCGATC ATAAAAAACG      5940
     AAAAACATCT AATGGAATCA TAGCTACTGT GCTATGCTGT ATGTTGACAA TCAGACCTCG      6000
     GTCATCAATG CCACGGAAAA ATTAGTAAGA CCAACTACGA TGGAAGCAAA CCGGAATTTG      6060
     GGAAAACTGA CCCAACAAGT CAACATTATT GCAGAAACCA TGAAGGAGCA CTTTATGGTA      6120
     TATAAGGAGT CAATTAAATT CCTTATGTTA TCAAATCAAG TGCGAAACTG GATTGAACAG      6180
     GCAGAAAGCC TACAAGCAAC AGCGATCTCA ATGATAACGG ACATTAGTGA AGGAAGAATT      6240
     CATCCTACAC TAATTGCGCC TAACAAAATG CTGGAGGAGT TCGAAAAAGT TAAGCAAAAA      6300
     TTAGGACGAA ATCAAATGCT ACCGAGTGGA AATTCAGTTA TACAATTACC ACTGATCTAT      6360
     AAACTGATGA AGGCCCAAGC TATGTTGTGG GAAAATTTAC TATTCATCGA AGCAAAATTG      6420
     CCGATATACA ACAATCAGGA AACGGATCTC TTTGAAGTAA TCCCAATACC ACTGTGGACA      6480
     AACGGAACAA AGCTTATTCC GAAATTGAAT TCTACATTTT TTGCGTATTT TTTTTTCAAT      6540
     ACAGACATAA ACGCATATCA CCTAATGTCT GAAATGGAAA TTAACCAATG CAGACAAGAG      6600
     GATTCGACAA GGCCATGGCT TTGCCAGAAA ATAATTGGGC ATGGAAAAAC GCGGATGATC      6660
     ACTCTTGCGA AwTATCACCA TTGAAACCAA GCAAGGCACA CTCATGCGAA ATGATGGAAT      6720
     TCCAAGGCAA TTCGTTCATC AAAGAGATAA GTGGATCCAA CCGTTGCCTA TTTAGACTGT      6780
     TTCGGAATAC AACAGCTAAT ATAAGATGCA ACGAACAGCA TCAAGACAGA ACAGCTTATA      6840
     AGACTGCCCA ATCAAGGCAT TATACAACTA CTTGCAGGAT GCACAGCAAT ATTAGGGGAT      6900
     ACAACAATAA TTACTCCTCA AAAAGTAATT TCGACAGCGT CTGAAATGTC TATTATCTTT      6960
     CCCAGTTTAC GAATTATAGA CGACAAGGAG AAGGAGGCAT GGAACGTGGT CCCGCTGAAG      7020
     CACTTGATTG TCAACAACAC TAATGAACTG CAAAATCTTC AAATGCGCAT CAAGACTCTG      7080
     AAAAATAACA AGGTACACAT TGATGACTTG ATTTTCCACA CGGCAAGCGG ACACTCGGCT      7140
     CTAGGGTTGA CAACGATTAT CATAATTATA TTGGTCATTT ATATCCGGAG GCAACGCATA      7200
     AATGAGAGAC GACTACTGGC CGTACACTCA AGGGATGTCT AAATATGTGT TTAGACATGA      7260
     TAAGTAGGCA AACTATAAAA ATGTTCTATT TATGGGCTGC AATAAACATG TCACyGGACA      7320
     GCATAAGTGG CAACTACAGA TAAGTACGAT TGCAGCGGCC TATTGCCGAA GTGTCAAGAG      7380
     ATATGACCAy GCGGGAGGTG ATTAGCGCGG TCATAGTCCT CAAACATAGA TTTAAGAATA      7440
     AAACTCAGCT GCATTTACCA ACGCAGACTG CGGCGTCTTA CAAGCGCTGC ATTATATAAT      7500
     TAGATGATAA GAACCTATGT AAGAATGAAT AAAAGGCGAA GCCCTCGCAG TAGCGAGTCA      7560
     GTTAGATTCA AACACCCGAA TTGAACTCAT TAAGTGTACG CACAAGTTTA TAGTGTGAAC      7620
     A                                                                      7621
//
ID   JOCKEY2   standard; DNA; INV; 3428 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063425; jockey2.
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 3428 BP; 1080 A; 784 C; 703 G; 861 T; 0 other;
     ccttcgttgc attcggacgt tcgcgattgt ctagtctttt tgtagtgaaa catcaacaaa        60
     tcttccaatc ttactgtgca cgcgcacaat ttctatttct atccactgca cagcagtggt       120
     gacagacaat tacggtactt atcatagata agctcaacca agccgacgct ttgtacgccc       180
     ctcgtctacg ccttgggcaa ggctgttaca gtttgttctc cgcttgttat ctctcgagct       240
     tgcgaagttg acaactagta gtaacaccaa tgttaccaac accataacca cgactcaagc       300
     tagctgttcg caggcaagaa gtgctgcaat gtctgatgcc atatttttgg gcactccaaa       360
     aactattgtc tccaggatcc aatctgtggc aagtgtgctg ggccccacgc aactggctct       420
     acgctatgca cgagtgacaa ttatttgtgc atcagctgcg gtggtgatca tgcttcaacg       480
     gacaaaaact gccctgtcag aattgaaaaa ggaaagaagc tctagccaaa cccaaggctc       540
     cctacttttg ttgctcatgg caacactgtc agctctaaaa aaggtgaaag ctatactcac       600
     ggattcattc cggctgaggc catcagaagc aatatttcaa ccgccgatat tgtacaggcc       660
     aaaggccctc aatttggttc acttgcgact caccaacacc acagtgatcc aaactcacca       720
     caagacttag gctttggaaa aaagtttcag gcgctggaaa gcgccatcca ggatataaac       780
     tcgagaatgg acaaaatctt caaactaatt ggggagactg tggaatcaaa aaaggttttt       840
     agagaactgg ttcagatctt catatcacgg acgtcaaaat gacccaacca ataataaaaa       900
     tcggattgtg gaatacacga ggactagcta gaaactctga ggagcttcag cttttcctaa       960
     ggatgcaaaa tattgatatc atgcttgcca ccgaaacaaa cgtgcgggaa ggacagcgta      1020
     tctctctacg tggttactcc acctacgacg ccagtggaaa cagcagaggt ggagccactg      1080
     tcatagtgca ctcttccttg aatcattgtc cccaaccccc aatctcaacc aacgaccggc      1140
     aggtagcgag cgtgcagctg cagacctcag agggaacagt tacttaccca cccagcgagc      1200
     ggttgataaa agcttatatt gagtaacttt ttgtaacact tggtggcata tttatgcagg      1260
     tggagactac aatgcaaaac atcattggtg gggaatctca agagcctgcg ccagaggttt      1320
     acagtgcgtt atttaaaaat aaataatatc aattgtaata atggatatta aaactgtgat      1380
     tcgctcccta tccagagaaa aagctaaagg aatcatccaa ggaatttgca agaacaggag      1440
     atttccgaac ccagcagatc tacagaaggt tatcaaatcg gctcaataaa gtgctgaccc      1500
     aaagaaaaca gctacatata tacaaccttt tggattacat gggcaccgat gccccttcac      1560
     aattctccct gtggagaatc acgaaatggt ttaagtttca ggcttgtcag aaatccgctg      1620
     caaggagccc gtctggtggt tggtccgcac atcacaggac aaagcagaag tgtttgcaag      1680
     gagcttggag caaagatttt agccgctcgc atatgccgat gcgaatcatt gccgtttggt      1740
     tgcagagtct cttttaacgc catttcaaat ggcactgccc gcggatcctg tcactctcga      1800
     agaactgaaa caacttgttt ccttgttgaa ttcaaaaaaa aaccgcggtt catgaccttc      1860
     tcgacaacag aacgataaaa accctatcag accatgctct gcaatttctg gcacaaaatt      1920
     ttaacagcgt tttacttgag ggttatttcc caaaagtctg gaagactgca aacataatcc      1980
     tgatactgaa accagggaaa aggccaacag aggtagactc gtatagacca atcagcctcc      2040
     tcctttccct tggtaaaatt atggaaagga taattctcaa cagaatgcgt gacgttgagc      2100
     ctgtagtatt ggcgatacct gatttccaat tcggattccg gactcaacat ggaacatccg      2160
     agcaactcca aagagttgtc aattttgcgc tagaagccct agaaaggaaa gagtatgcgg      2220
     tagcagattt tctggacatt caacaagctt ttgacagact ttggcatcct ggacttctac      2280
     ataaagcaaa gaaaatacta acaccccagc tattccagct tgtgacgagc tttttgttag      2340
     gacgaacttt ctgtgtgacg accgatggat gcacttcgtc cgttaaagcc atcgaagctg      2400
     gagtacctca aggaagtgtg ttaggcccta ctctatactc catcttctcc gcggacatgc      2460
     ccacccagac agcagtcact ggattagatc gtaaagatgt gctgattgca acatatgctg      2520
     acaacacagc ggtactgaca aaaagcaaca gcattatcga ggcctcagac gcactgcaag      2580
     agtacttgga cgcattccag aattgggcag agttgtggaa catctgcatc aatgctgaca      2640
     aatgtgcaaa cgtcaccttc acaaagcgca taggtagttg ccattctgtc tcacttaaag      2700
     aaagagtgct tgaccacaag tcatcataca aatatcttgg agtgatttta gatagaagct      2760
     taaccttcgg aaagcatgtc acggcgatac agcagtcctt taaaaataag gtttctaaaa      2820
     tgtcctggtt aattgctgcc cgcaacaagc tttccctcgc caacaaggtt aaaatttaca      2880
     agagcatatt agcttctggt ctattctatg ccatacaggt gtatggaatc gctgccaaaa      2940
     cgcacctgaa taaaattcgg gttcttcagg caaaaactct gaggaagatc acaggcgctc      3000
     cttggtacat gaggaccaga gatatcgaac gtgatctgaa tgtgacaaaa attggagaca      3060
     ggattcagga aatagcgaaa aaatacaatg acagactaga atctcatcct aatagtctag      3120
     ctagacgact aagtatcgca gcccaaagcc atcggacaag tacgagaaga agattaaaac      3180
     gccaccaccc tcaagacctg actgaccggg acttgacata aatcctactt aattaaaatc      3240
     ttctaaatat tactgcctaa acattccatt tctttaatac tcataatcat ataatctttg      3300
     taaataactt agatattaag aatcgtttaa attgataccg attagattaa gttgtccaag      3360
     aagggtaata gtacgctagt caattaaata aaataatttc gtttaataaa ttaattaaaa      3420
     aaaaaaaa                                                               3428
//
ID   G6_DM     standard; DNA; INV; 2042 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063503; G6.
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 2042 BP; 609 A; 617 C; 462 G; 354 T; 0 other;
     cagtcgcgat cgaacactcg acgagtgcag acgtgcctgc ggatcgacag caaattgttc        60
     acagttttaa gtcccgttac ttgtgcccag ccacttcgcg tcgcgtgatc ttgtcgcgcg       120
     ttttgattgg cccagccaac gtacctaacg gtagttcgca ctaacaccat cgcacacccg       180
     agtgtgcgtg ttatcagcgc aaaaaaccca gtgctcgaag cagcggtata tttgcaaagc       240
     agcagccacg tgctgcctgg ctcaccggct tacggtgccc agcttccccc ccctcctcac       300
     tccttatcaa ctttggagaa gatggactgg caggcccccc cgcgcaccca caagcttgga       360
     acaacaccac gcaaaaaggc tctgagaaca cgcaagagca gctccagcag cgagggaagc       420
     acctcgcata cagagccgga cgagataaag cgaaaaccgg caaagaaagc acagggagag       480
     gagctggaag agaagccaag cactagcgca gctctgcgca agaagctcgc caacaacgcc       540
     ttcgctttac tctcgagcga agaagacgag gacgaccaag agagctctga tgacgaaccc       600
     ggacctaaag acgattccaa gcccaagacc cccgagaaac caaagcccac cccgaagacc       660
     atcaagccac ctccgatttt tatccccgat gtgaccaaca tctcggcact cgtcaagatg       720
     atcacgactc ttgtaggccc gaagaacaat tttacctaca agaccgtgaa tggcaacaac       780
     gtacgtgtca tgatgccgga caaagagtcc tatacagctc tgcgtctcca acttgtggcc       840
     caaaacaaga ggcatcggac tttccagccg aaagatgaac gtgcatacaa ggttgtcatc       900
     aaaggactcc accactccac cgatcgtgag gaaatcattg aagaccttcg cagacaaggg       960
     cacgctgtta gagatctgca caatcccatt ggcagaagaa ctaaagaacc gctgggaata      1020
     ttcttcgcca acctggagcc ttccagcaac aacaaagacg tctaccaagt caagcggatc      1080
     tgcaggtcgg tagtaaccat tgaaccgccg cagaagttca acgacgtgcc tcaatgcttc      1140
     aggtgccaag gattcggtca tacacagcgt tactgcttcc tggaataccg atgtgtaaag      1200
     tgtggaggcc ctcacgaatc gagggcatgt gagaagaggg aggacgacaa agcgtgctgc      1260
     ttccactgcc aggcggacca tcctgcgtct ttcaagggat gccctgcata caaaagggcc      1320
     aaagcactcg ctgctccgaa aacaaggccc gtcgctaatg ctaacaaggc gccgcccgtg      1380
     gcatcaccaa acgtcacctc tggcaggagc taccgagacg ccctcaacgg agtgcacgca      1440
     gcaccgcaga atcccacaac cccagtccaa acccaaacag aaaccccaca ctccggtcag      1500
     atagaagcga tgttcgctcg catggaagga atgatggaaa ggatgatgga gcgcatgttc      1560
     acccagatga cacagctggt ggccaccatt ctcaacagca agtcatgcaa ttaaagctcc      1620
     acctagtcgt ctggaatgcg aacggcctgc agaacagcaa ggccatagtc gagcaccatc      1680
     tgaagaccca ccagatcgat atcctactcg tagccgaaac ccacttctcc cccagatccc      1740
     actcataggg aacttggaat cccacaagtc gctgatgaaa tctccaggct cagcgagaga      1800
     tacctgaaaa ggctcgaaaa ccaccctaac cacctcgcca ccaacctgtt agacaatagc      1860
     caaacaagca gacgtctcat gaggagacac cctctcgatc ttccacaaca atagacaaca      1920
     catataaaac ccgccacaaa tacatgtaca atagtatccc ttaagctaat gttcccccgc      1980
     aaaaccattt aattattgtc cactaggaca gattttaaat aaacaaacgc acgctacaaa      2040
     aa                                                                     2042
//
ID   LOOPER1_DM repbase; DNA; INV; 1881 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063402; looper1.
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 1881 BP; 636 A; 292 C; 365 G; 588 T; 0 other;
     ttaacccttt cgcgcccaac gttgcttgtg agcaatttct atgttttcag agctaactgt        60
     aagcgtgcct tttgttttta tctgctcatt ctttatgata acggtgcttt tatgtgtcta       120
     ctctaaatat gaaaagcaaa aaacgcattt ggagattatt tgcagaaaat atttgcaata       180
     aacagcacgc gcatcacaat aattattgtt tcgatattcg gtggaacttt tggaattagt       240
     aatttacttt tataatactt taaaaagaac ctaaagtata aacaaataat tatttagcaa       300
     agagttaaca agacagtgat atagtcaaac ttagttaata gtgaacaata agtaagtaaa       360
     taattttcta agttgcttgt gagcaacctt gggcattcgt ggtaataatt ttcaccgaaa       420
     gtgaaaggtt tgtctaacga agaaattgaa cgggctttaa acttcgattg ggatatttct       480
     actgacgaag aatgtggtga tgagatggaa gacatttcta cggtactgga gaagaattta       540
     gaaggaattc ttgaaagggg agaaagtatc gagattgacc ttctggaaaa tacagtgatt       600
     gaaggatgtg aacctgactc ttgcgttgtt gttgacagtt gcttggagaa aattgatcca       660
     aagacgctaa agtggagaac aaggccgttt gtagctccag agagtatttg ggaagatgac       720
     aaaacttttg atgtcgggga gataaagacg ccagtggagt tcttctacac actttttgat       780
     actcagctaa ttcatttaat ggcaaggcaa actgatatat atagtttgca ggagcacggt       840
     attgaactta aatgtactga tgaggaaatc aaacgctaca ttggcatttt attgtacttt       900
     ggtgttttaa aactaccgca attcagaatg gcatggtcaa aggatttaaa gattaccgca       960
     ataactgatt caatgccgcg tgggagattt aaaaaaataa aacaatgctt acatttcaac      1020
     gacaacgcca aacaattaaa aaaaggggat tgcaactatg ataaactcta caagatccgc      1080
     cctttgctca gaattctcaa agaaaatttt ggaaaaacta acgcaggaag agcatcaaag      1140
     tgtcgatgag caaataattg cattcaaagg tacgttttta attttctttt aaatttgctt      1200
     tatttttatt aattgctttt gttgcaggtc gatccacgct tatacaatcc aaacctcata      1260
     aatggggtct taaaattgtt tacgcgggct ggaatatctg gattagttta tgattttacg      1320
     ctatatgttg gagaaggcac ttctccttct tatggcttgg gaatatcatc ttatgttgtc      1380
     ttatatttgg cagaaagtct tcccaaagac aaaaatttta aactgtattt tgataattgg      1440
     tttacgtctg taatccttct gatttcgttg aaggaaatag gaatctttgc aacaggtact      1500
     gtacgtatga taaagttgaa cattgggtag tttttggaga aagaggacgt tgcagactgt      1560
     gcaaaactgc aacaccgatg accaaatgcc ttacatgcaa agtccatctg tgctgcaata      1620
     acaataaaaa ctgttttttt gtcataccac acttaaattg tcattataaa gaaaaatatt      1680
     tcatattctg tgatttataa aaaaaaaaca atgcttacac atcactactg cccgacgttg      1740
     ctcacaagaa aactttcgct accgcccaaa ctaatgggcg tggcatacta aaattttgct      1800
     aaatttttct aaaaataaat gtaaaaacat taatgataaa acaaaatttc acgggtaaaa      1860
     agttgggcgc gaaagggtta a                                                1881
//
ID   AF418572   standard; RNA; INV; 804 BP.
XX
AC   AF418572;
XX
DR   FLYBASE; FBgn0046701; Penelope.
XX
FT   source          AF418572:1..804
FT   SO_feature      CDS ; SO:0000316:172..>804
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0046700; Penelope\ORF1"
FT                   /db_xref="SPTREMBL:Q95VB4"
FT                   /protein_id="AAL14648.1"
FT                   /translation="MERSPEPSININGRHAVCTATNMSYAKIKTKYKDSKRTINKFQLT
FT                   LVKLTKLKSSLKFLLKCRKSNLIPNFIKNLTQHLTILTTDNKTHPDITRTLTRHTHFYH
FT                   TKILNLLIKHKHNLLQEQTKHMEKAKTNIEQLMTTDDAKAFFESERNIENKITTTLKKR
FT                   QETKHDKLRDQRNLALADNNTQREWFVNKTKIEFPPNVVALLAKGPKF"
XX
CC   Derived from AF418572 (AF418572) (Rel. 70, Last updated, Version 3).
CC   Michael Ashburner, 15-August-2002.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 804 BP; 355 A; 163 C; 120 G; 166 T; 0 other;
     ctcagtaaca atctccacgt caaaaagcgc agacgtgtaa aataattgcc ctgaagacgg        60
     tttgccgatg tgcaaccgaa atatatcgga agagaattga ataaaattgt ttttcattgt       120
     ttgttttaac aaactcggac ctcgagccag ccaacaaata aatattgaaa tatggaaagg       180
     tcgccagagc catcaataaa tatcaacgga aggcacgccg tatgcacagc aaccaacatg       240
     agctacgcaa aaataaaaac taaatacaag gattcgaaaa gaacaattaa taaattccaa       300
     ctaacactgg taaaattaac taaacttaaa tctagtttaa aatttttgtt aaaatgtaga       360
     aaatcaaatt taatacctaa cttcatcaaa aacttgacac agcatttgac catactgacc       420
     actgacaata aaacccaccc tgacataaca agaacattga ctagacacac acatttttac       480
     cataccaaaa tattaaactt acttataaaa cacaaacaca acctattaca agaacaaaca       540
     aaacatatgg aaaaagcaaa aacaaacata gaacaactga tgaccacaga tgacgcaaaa       600
     gcgttttttg agagcgagag aaatatagaa aacaaaataa caacaacact caagaaaaga       660
     caagaaacga aacacgataa gttacgagat caacggaacc tagccttagc ggataacaac       720
     acgcaaagag agtggtttgt aaacaaaaca aaaatagaat tcccgccaaa cgtcgtagcg       780
     ttactcgcaa aagggccgaa gttc                                              804
//
ID   QBERT    standard; DNA; INV; 7650 BP.
XX
AC   AF541947;
XX
DR   FLYBASE; FBgn0063782; accord2.
XX
FT   source          AF541947:1..7650
FT   SO_feature      five_prime_LTR ; SO:0000425:1..223
FT   SO_feature      three_prime_LTR ; SO:0000426:7432..7650
FT   SO_feature      CDS ; SO:0000316:2298..3512
FT                   /db_xref="FLYBASE:FBgn0063781; accord2\gag"
FT                   /protein_id="AAN34649.1"
FT                   /translation="MLGKKANISNTVRGRLGLRSESGLSEIREATEPKEKDQSVQSEDN
FT                   NPTNTMDSGNDTAAISPIVNSSRNTNLSLQQLLTLVHQLPTYEGPPDNLDRFIDRVDQL
FT                   LLLASSVDQTTGGKYLLGTIRDKIKGRADEALNVCDVLLTWDDIKINLKRLYSSKKTEE
FT                   MLVRELHNLPDGLSMGKLYYSAAKIRSDLMSLAREADPSAHSLAVKRDQYDRFCLNTFL
FT                   TGLKDPLSSAIRNQRPETIEKAYEYGQIELNFHRSLNKHQDNRRRDNPFHRNHPYAKGQ
FT                   PTNSDYNNRYIPRQQNYNNGNNARHVPRYDNNSNNNDSRFIQRQQNFNNNNNRRFTRQH
FT                   NSHNDSNGRQDRETLGRNPFHNNEQPDQTLSHQNRNKHNPSAPLCNINDDANFLLEASG
FT                   SQSAT"
FT   SO_feature      CDS ; SO:0000316:3811..5034
FT                   /db_xref="FLYBASE:FBgn0063780; accord2\pol"
FT                   /protein_id="AAN34648.1"
FT                   /translation="MDILSSLNAKINLAESILETPETAIPILTRANPVDTVYNLPQNTK
FT                   MLLPLPVNLMEGDFIYETTNLDNQVSITGGLNTANAGSAYFEVCNNSDQIQTLYLEEPL
FT                   QAEEFSSQTHQYLNCMTAATDTERQDDQQLNILTEHLNSEEKQYILKLCKSFKRLFHNE
FT                   NNQLTFSNAIKHSIPTTDNIPIHTKSYRYPFVHKDEVRKQISKMLEQNIIKNSHSPWSA
FT                   PVWVVPKKSDNIGEKKWRLVIDFRKLNEKTVSDRYPIPNIADILDSIGKTMYFTTIDLA
FT                   SGFHQIQMNPRDASKTAFTVENGHYEFTRMPFGLKNAPATFQRVMDNVLGDLVGNVCLV
FT                   YLDDIIVFSPSLQKHIADIKSVFTKLQNANLKIQPSKCSFLRKEIDFLGHIVTQEGVKP
FT                   NPLKIQTI"
XX
CC   Sequence from BDGP, August 2002.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7650 BP; 1796 A; 1266 C; 1692 G; 2896 T; 0 other;
     GCGCTAGTTA CAATCCCGTG GCCGAGGGAG GAAAGCTTCC AAAAAAACGA CTGAGTAGTT        60
     TGAGGTGTGA AATGAGAATG ATAATGAATT CTTTATTACA AATACGTATA ATGTATGTAT       120
     CTCCCAAATA TCTTCGTCAG AGTTCGTATT GGCGATCTTC GTTGAACTTT CGCTCGGCTC       180
     TCAGTTGCAG TACTGGGTAG ACCGAGAGAG GGGGTATGTT AACTCCTCCC CCCCCCCCCC       240
     CCCCCAGTCC GAAGAGAAGG CCGTAATGGG AAATGGCCGG ATCGGAGCAA GGTGATTAGG       300
     TGGCGTGTTG TTGGTATATG CCACGAACTC CGACTGTATT TTGAATTTAA CAGTTTTTTT       360
     TTTTTTAATG GGTATCTTAA TGTTAAACAT GAGTGTTGTG TATATAAACG TTACATCTAA       420
     TGCTAAAGTT ACATTTTGTT TACTTAATTT CTATCTTATA TTATTATTTG TTTCTTATGA       480
     TATAACAGTT TAGGGATAAT GTTTAGTTTA CTGGCTAATG GCTATCGACT ACTTTATTTA       540
     CGTAATTAAA GTGTCTAAAT TGAAGCTATT CCTACTTTAT AATAAATAAG TGTTCTTTCT       600
     TGTTAATGTG GGTTTTTATG TTACTTAGTT TGATAATAAT ATATTTATTA AATAGTGCTT       660
     GTCTTTCTTA TGTTCCTGCC ACTGTTTTCT TAACTCTTTT TCTAATTTTT TGTTTGTGTA       720
     ACTTTTGACC TTTAGTTGTT AGGAAAGTGA CGCCTTTGTC CCTATCTACT TTGTGTAGTG       780
     AAAATTTCGG TGTTATCTTG TTTCTGCGGT TTTCTTTTCT AAATATTGTA TCATTAGGCT       840
     CGACTTGTAC TGGTTTCTCT CTGTCCTTGT TTAATTTAGC CAATCTTCTT TCTGCGGTCG       900
     CGCTTAAATG TTCCTGTCCT TTTGGGTATA TGTCTTTTCT AAATTCGTTT AATTTTTTAA       960
     TTTAATCGTG GTGATTGTCG ATAATTATTG TTTTGTTGAA TATGTGAGTT CTTCCGTGGA      1020
     AGAGCTCGAA AGGGGTATAG GAAGTGCTGG AGTGTATTGC ATTGTTATAT GTTGCTACTG      1080
     CTTCTGCGAG TATTTGGACG TGCTCGCGTT CTAGGCGTGC TTCCTTTCTT TTGTTCAAGA      1140
     TTATCCTGTA TAGTTCGGTT AAGGTGGAGT GCAGTCCCTC GACAGAAGCA TTGCCCGTTG      1200
     ATTGTTGAAA TGAAGTTGTA TGAGCTGTTA TTTGGAATTG AGTTAAGAGG TCGTTGAATA      1260
     GACTGCCCGA AAATTCCGCG CCCTGGTCGA AAATTATTTT CTTTGGTGCG CCATAGTGAC      1320
     TTATGAATTG TAATAGGGCA TCGGCGACCT TTATTGAATT TCTATTGCTT AGGGGGTAGG      1380
     CTTGCGCTAG CTTGGTGAAT TTATCGATAA TTGTGAGGTT ACAAGTATAT TAATGAAATA      1440
     TATGTCTATA TGTACGACTG CCAATGGACC CTCTGGGGCG GTTGGGTCTT GCATCAATGG      1500
     TCTATGGGGA TGTCTATCGT ATTTTAGGGT TAGGCAGGTA TCACAATTTT TTATAATTTT      1560
     TGTGATAGTG TCTTTTAAAT GCGGGAAGTA AATGTCCCTT TTCAAATGGT TATACGTTTC      1620
     GTCTATCCCC CTATGATTGG TATTTAAGTG GTACGCACGA ATTTCGTTTT CCTGATCGTT      1680
     AGGATTCGTA ATTTCGGTTA GCCATATATT GCAGCGGACA ATTTTGTATA AATCATTTTC      1740
     AAAAAAATAG TTATTATAGG ACTCTTCTAT TATTTTGAAA ATATCGTCCG GTGCAAATAT      1800
     AGCGACTGTT TTATTCGGTT TCATGATTGC TTGAAGAGTG TTTGTAACGG AGTCGAAAGT      1860
     ATGCACGGGT TCTGTGATTA TGTGTCTTAC TTTATGGATA AATGGTGTTT CTACTTCTCT      1920
     TAGCGTTGTT GATCCGGTAC AGAATATTAT TTGGCAATTG AAGTGATTTA GTGGTTGCGA      1980
     AACGATTGGT ATAATTCGTG GGTCTTCGTT TATGTTTAAG TTTGGCTCAA TTCTGCTGAG      2040
     TGCGTCAGCA ACTACGTTTT GCGACCCTTT CTGGTATACG ACTTCGTAGT CGTAAGCGGC      2100
     CAGGATAGTT TTCCATCGAA GTAGTTTTGG ATTCTGACCT TTCAGATTTT CTAGCCAGAT      2160
     TAATGGCTTA TGGTCTGTGA CTATTTTGAA TCTACGCCCA AAGAGGTGTA GTCTGAAGTG      2220
     ACGTACAGAC CAAATGATAG CTAGCATCTC TTTCTCTATC GTAGAATAGC GGATTTCCGT      2280
     GTTCGATAGT GTCCTGCTAG AGAAAGATAT GGGTCTGTCA TTAGTATCTG GACCTTGTGA      2340
     CAGCACAGAG CCTATCGCAT AATTACTTGC GTCTGTGGTC AGCGTGAACG GTTTATTGAA      2400
     ATCAGGGTAT ATGAGTATAG GATCATTACA AAGGAGATCT TTCGACGTTT CGAATGCTTG      2460
     TCTAAATTCA TCGTCTATTA TTATAAATTT CTTCCCTTTT AACTGTCTCG TTATGGGTTT      2520
     AGTTATTTTC GCAAAGTCCT TTATGAATTT CCTGTAATAC CCTAATAGTC CTAAAAATGA      2580
     TTTAATTTCC CTGGTTGTCT TTGGACATGG GAAGTCCTAG ATGGTTTGAA TCTTAAGTGG      2640
     GTTTGGTTTG ACTCCTTCCT GGGTTACGAT ATGTCCCAGG AAGTCGATTT CTTTCCTTAA      2700
     GAAGCTACAC TTGCTTGGTT GGATTTTTAG GTTTGCGTTT TGGAGTTTTG TGAAAACAGA      2760
     TTTAATATCT GCTATATGTT TTTGGAGTGA GGGGGAGAAT ACTATTATGT CATCGAGGTA      2820
     GACGAGACAG ACGTTACCGA CTAGGTCACC CAAAACATTG TCCATAACGC GTTGGAACGT      2880
     GGCAGGGGCG TTCTTGAGAC CGAAGGGCAT TCTCGTGAAC TCGTAATGCC CATTTTCGAC      2940
     GGTGAATGCC GTCTTGCTCG CGTCGCGTGG GTTCATTTGA ATTTGGTGAA AGCCACTTGC      3000
     TAAGTCGATT GTTGTGAAAT ACATGGTCTT TCCTATGCTG TCTAGTATAT CTGCAATGTT      3060
     TGGGATAGGG TATCTATCAG AGACAGTCTT CTCGTTTAAT TTCCGAAAAT CGATTACCAA      3120
     GCGCCACTTT TTTTCGCCTA TGTTGTCACT TTTCTTAGGT ACGACCCAAA CGGGTGCACT      3180
     CCAGGGGGAA TGGCTGTTTT TTATGATGTT TTGTTCGAGC ATTTTTGAAA TTTGCTTTCG      3240
     GACTTCGTCT TTATGTACGA ATGGGTAACG GTATGATTTT GTGTGAATCG GTATATTATC      3300
     TGTTGTTGGT ATAGAGTGTT TGATGGCGTT AGAGAACGTT AGTTGGTTGT TTTCGTTGTG      3360
     GAAAAGTCTT TTGAATGACT TGCACAGTTT AAGTATGTAT TGTTTTTCTT CGCTGTTGAG      3420
     GTGTTCCGTC AGAATGTTTA ATTGTTGGTC GTCTTGTCGT TCTGTATCTG TTGCCGCGGT      3480
     CATGCAGTTT AAGTATTGGT GGGTTTGCGA AGAGAACTCT TCTGCCTGTA ACGGTTCTTC      3540
     GAGGTAAAGT GTTTGGATCT GGTCTGAGTT ATTGCAGACC TCGAAATAAG CTGATCCTGC      3600
     GTTTGCGGTG TTTAAACCGC CTGTTATGGA TACTTGATTA TCCAAATTGG TGGTTTCATA      3660
     TATAAAATCT CCCTCCATTA AGTTTACTGG GAGCGGAAGT AGCATTTTGG TATTTTGTGG      3720
     CAGGTTATAT ACTGTGTCTA CAGGGTTTGC TCTTGTGAGG ATTGGGATGG CGGTTTCTGG      3780
     TGTTTCTAGT ATGGATTCGG CAAGGTTTAT TTTTGCATTT AGGCTAGATA GGATATCCAT      3840
     GCCTAGGAGG CCATTGAAGT GGGAGTGGAA ATCAAAATAA TAAGAACTTA AAATTGGGTA      3900
     TTTTTTCGAA TTGTTTGAAA TTTATTTTAT CGGTATATTC CCGAATTTTG AATTTATTAA      3960
     GAACAGTGTG GATATTGATA TCCGAGGTTA ATTTTTTTGT CGTGCTCTTC GTTAATAAGT      4020
     GCTGGATTTA TGAAAGAGTG AGTAGATCCA GTGTCTATTA GGAATTTGAG AGGGTTTGAC      4080
     ACCATGGAGT TTGGTGATAA GAAAACAAAT GGCAAGGAAG ATCCGTGAGT CTTCTTGCTT      4140
     ATGTGGCCGA CTGGCTTCCC GAGGCTTCTA GTAGAAAATT CGCATCATCG TTAATGTTAC      4200
     ATAGGGGAGC GCTTGGGTTA TGCTTGTTCC TGTTCTGGTG ACTAAGGGTC TGATCTGGTT      4260
     GTTCATTATT GTGGAAGGGG TTCCTGCCCA GGGTTTCTCT GTCTTGTCGA CCATTACTAT      4320
     CGTTATGGGA ATTATGTTGA CGTGTGAAGC GTCTATTATT ATTGTTGTTA AAATTTTGCT      4380
     GTCTCTGTAT AAAGCGGCTA TCATTGTTGT TGCTGTTGTT ATCATATCGT GGTACATGAC      4440
     GAGCGTTGTT GCCATTATTA TAGTTCTGTT GTCGTGGTAT GTAGCGATTG TTGTAGTCGC      4500
     TATTGGTTGG TTGTCCTTTT GCGTATGGGT GATTCCTGTG AAATGGGTTG TCGCGTCGTC      4560
     GGTTATCTTG GTGTTTGTTC AGGCTTCTAT GGAAATTTAA TTCAATCTGA CCGTACTCGT      4620
     ATGCTTTCTC GATTGTCTCT GGCCTTTGAT TCCTAATGGC TGAACTAAGT GGGTCCTTTA      4680
     ATCCAGTTAG GAATGTATTT AGGCAGAATC TATCGTATTG GTCGCGTTTG ACCGCGAGAG      4740
     AGTGTGCACT AGGGTCGGCT TCTCTAGCGA GTGACATTAA ATCGCTTCTT ATTTTAGCGG      4800
     CTGAGTAATA CAATTTTCCC ATACTGAGTC CGTCCGGAAG GTTGTGTAGC TCTCTAACAA      4860
     GCATTTCTTC TGTTTTCTTG CTAGAGTATA GTCGCTTGAG GTTTATTTTG ATGTCATCCC      4920
     AAGTAAGGAG TACATCGCAG ACATTCAGTG CTTCATCTGC CCTGCCTTTA ATTTTGTCAC      4980
     GGATAGTTCC AAGTAAGTAC TTTCCGCCTG TTGTTTGGTC CACTGATGAG GCTAACAAAA      5040
     GGAGCTGATC TACTCTGTCT ATGAATCTAT CAAGATTGTC AGGTGGGCCT TCGTAGGTTG      5100
     GTAGTTGATG TACAAGGGTT AGTAATTGTT GTAGGCTCAG GTTTGTGTTT CTTGATGAAT      5160
     TAACGATAGG ACTTATTGCC GCTGTGTCGT TACCGGAATC CATAGTGTTG GTGGGATTAT      5220
     TGTCTTCGGA TTGAACCGAC TGGTCTTTTT CTTTAGGTTC TGTCGCTTCC CTTATCTCAG      5280
     ATAGACCAGA TTCGCTTCTT AGCCCTAGTC TGCCCCTAAC TGTATTACTA ATGTTGGCTT      5340
     TTTTTCCTAA CATTTACACG TATTGGGAAG AAATCTGTAT TTTTTTTTTG CAAATAATAG      5400
     TGAATAATTA TATATTGGGG TATAGTTATG ATATGTGTAA TAATATGTAA AAATAGGTAT      5460
     ATTAATAATA TCTTTTTGTT TAGGGAAAAT TTTGGGTGTT AGGCTTGTTT TGTTTTCGTT      5520
     TGTATATTAA TGTAGTAATA TATTGTATTA TATTCTGTGA TGCTATGTAT ATGTATCTGT      5580
     TTGAATGTGT ATTATATGTG TGTATTCTTT TCAAAATAAA AGAAAACCTG TATGTGTGTG      5640
     TCCGTTACGC AGTTTCTTCT TATCCTTGTT TCCCGGTGCT TAGTATATGT CGTTCTTGTA      5700
     GTGCTGCTGT GCTTCTATCC ACCTTTGTAG TTTTTTTTTT CGTGTTTTCG ACTTTAGCTG      5760
     TAATACATGA TTTAAATAGC TATTGAATAG AGTGTATTTT TTATAGGTCT GTGAACATGT      5820
     GACAACAGTA GGCGTTAAGT TGGTTTTTTT TTTTCTTTTT TTTTCTATAC ATATATGCAT      5880
     TTTTTTTTTT GAGTGGGTTT TTTTTTAATT GAGTGTTTTT TTTTGTAGTG TATATACTGT      5940
     ATATACTGGC GAAGCGTAGG AGTCATAATG TCTGCAAATC TAATTGAGGT TCATACGGCC      6000
     GGACAGGGGT ACAAAGGGAC ATACGTTACA GGGTCTGAAA TGCTTTCTGT TATATACTTT      6060
     TAACTTTCGC ACTCTGGAGC GACATCAGCT TTTGGCGGCA GCCAATGTGC AGTGATGCGT      6120
     CGACGTCGCT AGGGTTATAC AAGCGGCGCA ACACAAACAC ATACATGCTT ACTTGATTTT      6180
     GCCGAAGGAA ACTGTATCAC TGTGCAAATT TTTTTTTTTA TTCTTCCTTT TTTTCTTTTT      6240
     TTTGTCTATT TTTTTTTATT TATTAGTATT ATTATGATTG TTATTATTAT TATTTTTTTT      6300
     TCATGTAAAT GGATAAGTGA AAACGATACC GGTGCCTTAA CAGCGATTGT TGTACACATA      6360
     TTCGGTCGTT AATCACACAA CTCACATTTA TTTTTATAAC CCACTGTGAA TTAGATCTCG      6420
     TTGCCTTGGA GGCGACTGAT GTTCAAATTC ACCTCCTGCA CAGCGAGTTC TGTATTTGTT      6480
     AAAAAAAATT TGTGTTCATT TAAATTTTTA AGTGAAAACG ATCCCGGTGC CTTATCAGCG      6540
     ATTGATGTGC ACATATTCGG TCGTTAATCA CACAACTTAC ATTTATTTAT TTATTATTAT      6600
     ATTTATTTCT TTTTTTTTTT TAAAAACACT TGTGTAGGAG GTCCCGTTGT CTCGGAGGCG      6660
     ATCGGTGTCC AAAATTTATT CTTTGCGGAG CGAGTTCTGG TCACAACGTA GTCTAATATT      6720
     CGACTGATCT CGTTCTTTAC CATTCTCTTT TCTGTTGTGC ACAACGACCA ACACTCAGCG      6780
     GCAGCGACGT CGCTCTGTCG CCGTGCCAAA CGGTTGTTCT CAGAACTATA GAGACACAAC      6840
     AACCGTTCGC AGTGCGAATA TAGGCTGATG TAATATTACC ATGGTGATGA AATTACCATT      6900
     CTTATGAAGT AACCAAAGAG CAACCAATAC TCTCGCACAC ACCAAGCGCT CTCCGACACA      6960
     CAAATGGTAA CCATACACAG TAGTTTAACA TGTCAGAAAA AATTTTTCCT CTTTTATTTT      7020
     TTTTTTTTTT ATTTATTTAT TTTTTTTTTT TGTTGATTAA TTTACCATTT TTATGAGTTA      7080
     GGGTGTATGG ATGATCCCGG TGCCTTATCA GCGATTGATG TACACATATA CGGTCATCAC      7140
     ACACAGTAAC TTGTTGGTAT AATTGTTGTA AATTGTCCCG CACAAGCGAT CCCGGTGCCT      7200
     TATCAGCGTT TGATGTACAC ATATACGGTC GCCTGTGAAG CAATTTGAAC TTGATTTCGT      7260
     TTGTTTCCTT TGTTTTACTT GCACTTGCAC GTTATTATGT TTCAATACGC TTTATCCAAT      7320
     TCCTTTCTAT TTCACCACTC ACTAATAAAA TCCCCACAAC CACTGCCGTC ACATGTTCAA      7380
     TACCTCTTTA AGCGTAGTGG GCATTGTTAA TCCCTTGTCC GTTGACCGGC TGCGCCAGTT      7440
     ACAATCCCGT GGCCGAGGGA GGAAAGCTTC CAAAAAAACG ACTGAGTAGT TTGAGGTGTG      7500
     AAATGAGAAT GATAATGAAT TCTTTATTAC AAATATGTAT AATGTATCTC CCAAATATCT      7560
     TCGTCAGAGT TCGTATTGGC GATCTTCGTT GAACTTTCGC TCGGCTCTCA GTTGCAGTAC      7620
     TGGGTATACC GAGAGAGGGG GTATGTTAAC                                       7650
//
ID   McCLINTOCK    standard; DNA; INV; 6450 BP.
XX
AC   AF541948;
XX
DR   FLYBASE; FBgn0063917; McClintock.
XX
FT   source          AF541948:1..6450
FT   SO_feature      five_prime_LTR ; SO:0000425:1..498
FT   SO_feature      three_prime_LTR ; SO:0000426:5953..6450
FT   SO_feature      CDS ; SO:0000316:1279..2562
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0063916; McClintock\gag"
FT                   /protein_id="AAN34650.1"
FT                   /translation="MAVAAPSPIILSDSNMIQVERQINGVEQFNGDPQTLYTFISRIDF
FT                   ILALYQTTDERQKLTIFGHIERNIAGEVIRTLGVTNLTTWTELRTHLILNYKPQRPNHL
FT                   LLEDFRNTQFRGNVREFLEEAERRRQILTNKLDLESDTAETTLYNQLIRTSIETLILRL
FT                   PIHIQLRIVKCEIPNLRSLINILQEKGIYEIATTYKNNTKPVSNPIKSPNNATHRQTTN
FT                   YYNHTTPFQPSYNAMYQPIRQPISYIPPQLPRTNPNPFSQYQYRQLHPQPNVSVIAQPR
FT                   PLNRQHTFDQNRPGLSYSNALNTRENITTGGPALKRQRPSDSGQSRMSFDEAHYQEELD
FT                   QTHQQFNPYMHYGNHPQYPFDLYMPYGPPPNNIPIYYMPYDPPQQHPVGIQEMAEAREE
FT                   PTEPPMELITEAQTAENFRPQASEQANS"
FT   SO_feature      CDS ; SO:0000316:2622..5642
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0063915; McClintock\pol"
FT                   /protein_id="AAN34651.1"
FT                   /translation="MATQNFFKLPIQEIAKKINSSNGQFIAQKKVTLPKNNLFPKPYDF
FT                   FIYPFSTKYDLILGRQLLDEGTTSVNYGPRTVTIYGHVHEMIDAFLPSEEIHIQDTQNN
FT                   SFRLDHLNSEEKAKLITLLKEFQDLQYKKGDQLTFTNNVKHTIRTSHNDPVYRKPYGYA
FT                   PGLDTEVENQIKEMLDQGIIRESNSPYCSPIVVVPKKPDISGQKKYRIAIDYRYLNEIT
FT                   IADKYPIPNMDEILSKLGGCNYFTTIDLIKGFHQIEMDPESIPKTAFTTKTGHYEYTRM
FT                   PFGLKNAPATFQRCMNDVLRPLLNKICMVYLDDIIVFSASLEEHLQSLRAVFQALSNAN
FT                   LKLQLDKCEFLKHDTYFLGHMVSPEGIRPNPEKLRAIENYPLPTKPKEIKSFLGLTGFY
FT                   RKFIPHFAQIAKPLTTCLKKDKKVDIKNPEYIEAFKRLKLLISNDPILRSPDFKKKFVL
FT                   TTDASNVALGAVLSQDGHPISYISRTLNDHETNYSTIEKELLAIVWATKTFRHYLLGRH
FT                   FEIASDHQPLCWLHKMKEPNAKLTRWKFRLAEYDFDIKYVKGKENHVADALSRITIEEA
FT                   FFTEATQHSAQEDNQNLISLTEKAVNNYNRQVIFTKGPEKVKQENYYKKKIIHISYETL
FT                   THKKAKQYLIDYFVNNHSALYIDSDADFETIQAAHKEIINPSTTKVIRSLTLLKNIKSY
FT                   AEFKELILQSHEKLLHPGIQKTKKLFSENYFFPNSQLQIQNIINECQVCNLAKSEHRNT
FT                   KVPFKLTPSIEFCRDKFVIDIYSVEGKHYLSCIDTYSKFATLEQIKTKDWIECKNALMR
FT                   IFNQLGKPKLLKADRDGAFSSLALKEWLETEGVELQLNTTKTGVADIERFHKTINEKIR
FT                   IINTMKNTETDLSKIETILYTYNHKTKHDTTGQTPAHIFLYAGQPTLNTQELKRTKIDK
FT                   LNKGREDHDIDTRYRKGPLQKGKLDNPYKPTKNVEQTDADHYKITNRNRAMHYYKTQFK
FT                   KRKKINQTHTPTQMATS"
XX
CC   Sequence from BDGP, August 2002.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 6450 BP; 2555 A; 1350 C; 952 G; 1593 T; 0 other;
     AGTGACGTAT TCACGCCAAC TCATCACGCT CAGTTAATTG AATATTCGCG CCACCCAAAC        60
     TGGGCCGCTC TTGTAAACGG ATTCCCAAGC TCTCCTCAAC GTAAACATCC AAGAACATCA       120
     CATGATTTTA CCGTTTAAAG CTATTTTCTG CGTTATCTGC GTGTCGATCG TTATTACTTC       180
     ACTTCACAAC CTTGGGAGAT ATTCCGTTTT TTTCCTATTC TTTATTTCTG TAACCCATAG       240
     AGGCCCCTCC TCAATTCTCA CTCACATTTG TAATCAGTCT TAAGTTGAAA GTTAGACCGT       300
     AAAGTTCAAT AAGTCTTAAA CCGATATTTA ATAAAAAACA AAACCGAATT TATTCAGTGT       360
     TTAATTTATT TCGGAGTTGA TCCTAGTTTA AATACGGATC ATTTGTTCGA CTTAAAAAAA       420
     TAAAAACTAT TTAACTTTCA GCGTTGATCT TAGTTTAAAT ACGGATCATT TGTTCGGCTC       480
     AATTAAAAAC TATTTAACTG GCGCAGTCGG TAGGATAACT CAAAGATTGC TTGATGCGAA       540
     AATATAAAAT TTTTAATTCC TGTAATCTGT GATATCCGCC AAAGAACTTA CGTAGTGTTA       600
     CTGTGAAAGT GAAGTGTTGA CCATTAATAC GCCTACACTT AAAAGAACAG TGAGACACAT       660
     CTGTTTAAAC AACAGTGAAC TTCCAACATT TACCGGAGCT ATAAATCCAG AATTTTTTTT       720
     TGGTTACTCC GAACAAGTGA ATTGCTGGAA AATAAAAAAT AAAAAAAAAA GAACCTAAAA       780
     CTAAATATAT TAAGGAATTA CCAAATAAGT GAAAAAATTA AAATCTAAGT GAAAGAAAAC       840
     ATAAGGAAGT AAACCCAAAT CAATCAGTTA AAAAAAAAAA TCTCTAATGC GAACTATTAA       900
     ATAAGTGCAT ATAAAACAAA ACTATATACA CTTAAAGAAA ATATATATCT AAATAAACTC       960
     TATCTAAGCT CAACGGAAAA TAACAAAAGA AATAAATCTT AACGTGTTAT CAAGAGAGGA      1020
     GAGTTATAGA CTTCAAACGT AACATAAGTG AAAAATCAAT AGGAGTGAAT AAAATTTAAA      1080
     TTAAGACAAA TAAAAAACTG AAGATATAAA GTTTGAATAA ATTAAAAATA AACTAAAACT      1140
     ATACAATACA AAAATAAAAA TAACAATAAT AAAATTATGA AATAACCGCT ACTCACGAAA      1200
     CATCAGCAAC TATAAACATT TAAAAACAAA AAAAAAAGAA ACCAACAATT TTGTACTCTA      1260
     ATAAAAAAAA AAAAAAAAAT GGCAGTAGCA GCACCAAGCC CAATAATACT GTCCGACTCG      1320
     AACATGATTC AAGTTGAACG ACAAATAAAT GGAGTCGAAC AATTCAACGG GGACCCACAG      1380
     ACCCTGTATA CGTTCATCAG CCGCATCGAT TTCATCCTGG CACTATATCA AACGACCGAC      1440
     GAACGGCAGA AGCTCACCAT CTTCGGACAC ATTGAGCGCA ACATCGCGGG AGAGGTCATC      1500
     CGCACACTAG GAGTTACGAA CCTCACCACC TGGACGGAAC TCAGGACTCA TCTGATCCTA      1560
     AACTACAAAC CCCAGAGACC AAATCATCTA CTATTGGAGG ACTTCCGGAA TACCCAATTC      1620
     CGAGGTAACG TTCGTGAATT TTTAGAAGAA GCCGAACGTA GACGGCAGAT ATTAACAAAT      1680
     AAGTTAGACT TAGAAAGCGA CACTGCAGAA ACTACCCTGT ATAACCAACT AATACGAACC      1740
     AGTATAGAAA CATTAATTCT AAGATTACCA ATTCACATAC AGTTAAGAAT AGTTAAATGC      1800
     GAAATTCCGA ATTTAAGATC ATTAATAAAT ATATTGCAAG AAAAGGGAAT TTATGAAATA      1860
     GCAACTACAT ACAAGAACAA TACAAAGCCA GTCTCAAATC CCATTAAATC ACCTAACAAT      1920
     GCAACTCACA GACAAACAAC TAACTACTAT AATCATACAA CACCATTCCA ACCATCATAC      1980
     AACGCCATGT ATCAACCAAT TCGCCAACCA ATTTCATATA TACCACCTCA ATTACCCAGA      2040
     ACTAACCCTA ATCCGTTTTC CCAATACCAA TACCGTCAAC TTCACCCTCA ACCTAACGTA      2100
     TCTGTTATAG CTCAACCTAG ACCATTGAAT CGTCAACATA CATTTGACCA GAACCGACCA      2160
     GGACTTAGTT ATTCAAACGC ACTAAATACA AGAGAAAATA TAACGACCGG TGGACCAGCA      2220
     CTAAAGAGAC AACGACCGTC TGACAGTGGA CAATCACGTA TGAGTTTTGA TGAGGCTCAT      2280
     TACCAAGAAG AATTAGACCA AACTCATCAA CAGTTCAATC CTTACATGCA TTACGGGAAT      2340
     CATCCCCAAT ATCCTTTCGA TCTTTACATG CCTTACGGGC CGCCCCCCAA CAACATCCCG      2400
     ATTTATTACA TGCCTTACGA CCCCCCACAA CAACATCCGG TTGGCATACA AGAGATGGCA      2460
     GAGGCACGAG AAGAGCCAAC TGAACCTCCT ATGGAATTAA TAACAGAAGC TCAAACGGCT      2520
     GAGAATTTTC GGCCCCAAGC CTCGGAACAA GCCAATTCAT AATTATTAAA CACAAAGGAC      2580
     TCAATTTAAA ATGCTTAATA GACACAGGCT CAACAGTAAA TATGGCCACT CAAAATTTTT      2640
     TCAAATTACC AATCCAAGAG ATAGCAAAGA AAATAAACTC AAGTAATGGC CAGTTCATTG      2700
     CACAAAAGAA AGTAACGTTA CCCAAAAATA ATCTTTTCCC TAAACCATAC GATTTTTTCA      2760
     TATATCCTTT TTCAACTAAA TACGACTTGA TTTTAGGACG ACAATTACTT GACGAGGGAA      2820
     CTACATCAGT AAATTACGGA CCCCGTACAG TTACAATATA CGGACACGTG CACGAAATGA      2880
     TCGATGCCTT CCTTCCTTCA GAAGAAATAC ATATTCAAGA TACACAGAAT AATTCCTTTA      2940
     GGCTAGACCA CTTAAATTCC GAAGAAAAAG CAAAATTGAT AACCCTCCTA AAAGAATTCC      3000
     AGGACCTTCA ATATAAGAAG GGAGACCAGC TCACATTCAC TAATAACGTA AAACACACTA      3060
     TTAGAACATC CCATAATGAC CCAGTATACA GAAAGCCTTA CGGATACGCA CCCGGACTAG      3120
     ATACCGAAGT AGAAAACCAA ATAAAAGAAA TGTTAGATCA GGGAATAATC CGAGAAAGCA      3180
     ATTCCCCTTA TTGTAGCCCC ATTGTAGTAG TACCCAAGAA ACCAGACATC TCCGGACAGA      3240
     AGAAATACAG AATAGCCATA GACTACCGTT ACCTCAATGA AATAACAATA GCAGACAAAT      3300
     ACCCAATACC AAATATGGAC GAAATCTTAA GCAAGTTAGG AGGCTGCAAC TATTTTACTA      3360
     CAATTGACTT AATCAAAGGG TTTCACCAAA TAGAAATGGA CCCCGAGTCT ATCCCCAAAA      3420
     CAGCCTTCAC AACTAAGACA GGGCATTACG AGTATACGCG TATGCCATTT GGACTGAAAA      3480
     ACGCCCCAGC TACCTTCCAA CGATGTATGA ACGATGTACT TCGTCCACTA TTAAATAAAA      3540
     TCTGTATGGT ATACTTGGAC GACATTATTG TATTTTCAGC TTCCTTAGAG GAACATCTTC      3600
     AATCCCTTAG AGCAGTCTTT CAAGCATTAT CTAATGCTAA TCTAAAACTC CAATTAGATA      3660
     AATGCGAGTT TTTAAAACAC GACACATATT TCTTAGGACA TATGGTTTCT CCAGAAGGTA      3720
     TAAGACCTAA CCCGGAAAAA CTACGAGCAA TAGAAAATTA CCCCCTTCCT ACTAAGCCGA      3780
     AGGAGATAAA ATCATTTTTA GGACTCACAG GTTTTTATAG AAAGTTCATA CCCCATTTCG      3840
     CACAGATTGC AAAACCCCTA ACAACATGTC TTAAAAAGGA CAAAAAAGTA GATATTAAAA      3900
     ACCCGGAATA TATTGAGGCA TTCAAAAGGT TAAAACTCCT TATTTCAAAC GATCCCATAC      3960
     TTCGATCACC AGACTTCAAG AAAAAATTTG TACTCACAAC AGACGCTAGT AATGTAGCTC      4020
     TAGGAGCAGT ACTTTCTCAA GATGGTCACC CCATAAGTTA TATTAGCAGA ACACTTAACG      4080
     ACCATGAAAC AAACTACAGT ACGATTGAAA AAGAACTACT AGCTATTGTT TGGGCAACGA      4140
     AAACGTTTAG ACACTATTTG CTAGGTCGAC ATTTTGAAAT AGCAAGTGAT CACCAACCGT      4200
     TGTGCTGGTT GCACAAGATG AAGGAGCCCA ACGCTAAATT AACAAGGTGG AAATTCAGAC      4260
     TTGCAGAATA CGACTTCGAT ATTAAATACG TCAAAGGCAA AGAAAATCAT GTAGCAGATG      4320
     CCCTATCCAG GATTACTATA GAGGAAGCGT TCTTTACTGA AGCTACACAG CACAGCGCCC      4380
     AAGAAGACAA CCAGAATTTA ATTTCCCTAA CAGAAAAAGC GGTAAATAAT TACAATAGAC      4440
     AAGTCATTTT CACTAAGGGA CCAGAAAAAG TAAAACAGGA GAATTATTAT AAGAAAAAGA      4500
     TCATTCATAT TTCGTACGAA ACACTCACTC ATAAAAAAGC CAAACAGTAT TTGATAGATT      4560
     ACTTCGTAAA CAACCACAGC GCTTTATACA TAGACAGCGA CGCTGATTTT GAAACAATAC      4620
     AGGCAGCCCA TAAAGAAATT ATCAACCCAA GCACCACAAA GGTAATTAGA AGCCTAACTT      4680
     TACTAAAAAA CATTAAATCA TATGCAGAAT TTAAGGAATT AATCCTTCAA TCCCATGAAA      4740
     AGTTATTGCA CCCAGGAATC CAGAAAACTA AGAAATTATT TAGTGAAAAC TACTTTTTTC      4800
     CAAATAGCCA ACTACAAATC CAAAACATTA TAAACGAATG TCAAGTTTGT AATCTAGCAA      4860
     AGTCAGAGCA TAGAAATACC AAAGTCCCAT TTAAACTCAC GCCAAGTATA GAATTCTGTA      4920
     GAGACAAATT CGTTATAGAT ATTTATTCAG TCGAAGGCAA ACACTATTTG AGCTGCATAG      4980
     ACACTTATTC AAAATTCGCT ACACTAGAGC AGATAAAAAC CAAGGACTGG ATAGAATGCA      5040
     AGAACGCCCT GATGCGCATA TTTAATCAAT TGGGAAAACC GAAGCTATTA AAAGCAGACA      5100
     GAGATGGTGC ATTTTCAAGT CTAGCATTAA AAGAATGGTT AGAAACAGAA GGAGTAGAAC      5160
     TACAGCTAAA TACCACAAAA ACAGGAGTAG CAGATATAGA ACGTTTTCAT AAGACCATTA      5220
     ACGAAAAAAT AAGAATAATC AATACTATGA AAAATACTGA AACAGACCTG AGTAAAATAG      5280
     AAACTATACT TTATACTTAC AATCACAAAA CAAAACATGA CACCACGGGA CAAACGCCCG      5340
     CTCACATATT CTTATACGCA GGACAACCTA CCTTGAACAC GCAGGAACTA AAGAGAACTA      5400
     AAATAGACAA ATTAAACAAA GGTAGAGAAG ACCACGATAT CGACACAAGA TACAGAAAAG      5460
     GACCATTACA AAAAGGCAAA TTGGACAACC CATATAAACC AACCAAAAAC GTAGAACAAA      5520
     CAGACGCTGA CCATTACAAA ATTACTAATA GAAACAGAGC TATGCATTAC TACAAAACAC      5580
     AATTCAAAAA ACGAAAGAAA ATTAATCAAA CCCATACCCC GACTCAAATG GCTACCAGTT      5640
     AGACTACACA GATTCACAAT TATATTTTGA GAAAAGAAAA CAAAGTGTAT AGTAATGAAA      5700
     ATAAAGAAAT AAACAATGAA TGTGTCACCA ATATAATTAA GCACCTAAAT CCAATCTGTA      5760
     ATTTTAAGCC AATACCCACA AATGAATTAA TGAAATATAT AGAATAATGA TGTATACAAA      5820
     ACTAAAATTA AGAAAAAACA AAAAAAAAAA AATCAGGACA TACCACCACA AACTGGAATG      5880
     GAAGAAGTTC CACTACCCTT ACTATATCCA TCAGTCCCAG CCCAAGTATA GGCTTATCTT      5940
     TAAGGGAAGG GAAGTGACGT ATTCACGCCA ACTCATCACG CTCAGTTAAT TGAATATTCG      6000
     CGCCACCCAA ACTGGGCCGC TCTTGTAAAC GGATTCCCAA GCTCTCCTCA ACGTAAACAT      6060
     CCAAGAACAT CACATGATTT TACCGTTTAA AGCTATTTTC TGCGTTATCT GCGTGTCGAT      6120
     CGTTATTACT TCACTTCACA ACCTTGGGAG ATATTCCGTT TTTTTCCTAT TCTTTATTTC      6180
     TGTAACCCAT AGAGGCCCCT CCTCAATTCT CACTCACATT TGTAATCAGT CTTAAGTTGA      6240
     AAGTTAGACC GTAAAGTTCA ATAAGTCTTA AACCGATATT TAATAAAAAA CAAAACCGAA      6300
     TTTATTCAGT GTTTAATTTA TTTCGGAGTT GATCCTAGTT TAAATACGGA TCATTTGTTC      6360
     GACTTAAAAA AATAAAAACT ATTTAACTTT CAGCGTTGAT CTTAGTTTAA ATACGGATCA      6420
     TTTGTTCGGC TCAATTAAAA ACTATTTAAC                                       6450
//
ID   STALKER4    standard; DNA; INV; 7359 BP.
XX
AC   AF541949;
XX
DR   FLYBASE; FBgn0063897; Stalker4.
XX
FT   source          Release3na_arms:3L_21292630..
FT   SO_feature      five_prime_LTR ; SO:0000425:1..403
FT   SO_feature      three_prime_LTR ; SO:0000426:6957..7359
XX
CC   Sequence from BDGP, August 2002.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7359 BP; 2888 A; 1340 C; 1226 G; 1905 T; 0 other;
     TGTAGCATAT TGGACTAATC TACCCTAAGA ATACAATAGA TGATTGGGTA TAACATAGCG        60
     TCAATACATT GTGACACTTT GTCATAATAA ATATAAATAT ACAAATATAC AAAAAGACCA       120
     CCAAAAACTA CGTAAGCACT CCAGCGCCCC AGTAATACGA TCTAACGCTT ATACATAAGC       180
     CGATCGCGGA GCGTGGGAAT GCTGAGCATG CACTTTGCAG CTCAAGTGGT CAATGCCTTC       240
     TGCATGCATA TGTATATGTA TAAATGTAAG TAAGAATACA TAGATATAAG CAATGTATGT       300
     GCGGGTTAGC TGAACCCAAC TTCAGCACAC TTTGATCATT CGAATAAACA GATTCAAACA       360
     GAGCAGAGGT TCTGAGCTCG GAAACCAAAT CTTTTACATC TATACCTGTT ATATTTTTAA       420
     AACAATTACA TGGCGACCGT GACAGGACAC GCGTGCATGA AGTTAACGAT TATAATAAAA       480
     GCATGAAGTG TCCGTGGCCA AAAGAAATAA AATGAATAAA TTCAAACAAA ATTCAAATTC       540
     GTGGCCAAAG AAATAAAAAC AATTACATGG CGACCGTGAC AGGACATTAC ATGGATAAAT       600
     GCATTACATA CATAGAAATG CAGAAAGGAC AAATCTTCTT AAAAAACTTT TGAACATAAA       660
     TGGCAGAGGA GCCACAATTC TCGAAGGCAG TACCCACTAA GCAAAGGGAC TTGCCAACTC       720
     TGGAAGAGGC CCTACAGGAG AATCCAGCTA ATGCACCACG CCCACTCACG ATAAAAGAGT       780
     ACAGAGCCAG GCAGCAGAAA AAACCGCAAA ATAAACATAA AAGAAGCGGT CAAAGAATTA       840
     AGCTACTTCA GCAACGGCGA CTGGTCAAGG ACATGACCAA GTCGGCAAAA GACGAGGAAT       900
     CCCGACAACG CTACATAGTG CGTCTTCAAG AAATAGAGAC TAAACTTCGC AAAGGTGCGA       960
     AACAACGCAA ACGGGCTGCA TAAATGCCAA TGCCCCAATT TGCCAAAACT TCAATCAGAT      1020
     GCATCCCGAC AACGCTACAA AGAGCGTCTT CAAACACAGG AAATAAGTTT TGCAAAGGTG      1080
     CGAAACAACG CAAACGGGCT GCATAAATGC CAATGCCCCA ATTTGCTTTA GATTTAATTT      1140
     CTACCCCAAG CCGATGCGGG AAACCGCTGC TTGGAAAATA CTAAAATCTG TTAGGCTTTT      1200
     TCACTAACAA TGTGGTTGGA GAATTTTTTT TTTATTATTG TAAACGACTA TGTGAGCCAA      1260
     CCACATATAT TAACCATTAA TATTTCCACG TCTCTGGCAC TGAGTATACA TATATACTCA      1320
     GCTGCAAAAT GTTATTTGTG TAAAATGACA ACAATGAAAA AAGTTCTTAT TTTGACTAAT      1380
     ATAAAAGAAA ATATTAATTT CATTTTTCCG ATTTTCAAGA AGAAAATATT TTTCCTTCCT      1440
     TTAAGCTCCA AATAGAATAT CTTATTTTTT TTTCCTTTTT TAAAGATCCG TTTCATTGAA      1500
     TATAGATAAA ATGGGATGGT TTAGCGATTC TAGTGAGGCA AAGGACAATA CTGCCAACGT      1560
     AGTTAATAAC GTAAAAATTA TAGATCACAC AGACGATATA AATGCGTTGT GGATCTTATT      1620
     GCTGATCATT ACAATAGTAC TACTTCTACA ATTTCTGCTT ACAATTTATG TTAAGCATAA      1680
     CAAGATCATC AAAAGACGTT ATATAAATAG GGCAAATCGT TTAGACCAGA TTTAAAAAAA      1740
     AAATAATATG GATTAGAAGA AAGCTTAATA AAAACTTTTT TTTTACGACA AGAATGGAAT      1800
     GGAGCGAAAT AGCGATACGA ATAGACGAAT TTCGCTTCAG GTTCGATAAG TCTTATAAAT      1860
     GTATCAATAG AGACGCAGTA ATAAAATCCG AAACTTTGAA AAATCATATA GAGACATTAG      1920
     TAGGAGAATA TAATAATATA GTTACATTAG TAAATAAATA TGCAAATAGG CTCACATCTG      1980
     AACATAATAA CAAATGTTTG AGGGTTATAA AATCCCTAAA CACAAGATTA AATAACATCA      2040
     GAAAAAGAAG GCATATTCTG ATAGATGTAC CAGAAAGTCT AAGTCAATTG GTTGAATTCA      2100
     ACACAGACCA GTTCAAAGAA CTAGACGAAT CTGTTCAATC AAGCGGCGCT GAGTCCGATA      2160
     GTGACATTGA AACGCTAGAA GGAAGCGACC GAATTGAATT TAAATCTGAA CCAATAAAAA      2220
     TTTCTGAGAT GGCACAGACA TTGATAGAAT TTATCAGGCT AGCCACATCT CTGATACCAG      2280
     AGTTTGATGG TAAACCAGAA AATCTACAAA GTTTTTTGGA TGCTCTAGGT CTACTAGATA      2340
     GCTTAAAGAG CACACATGAA ACGACAGCAG TAAGCCTAAT AAAAACTAAA CTTAAAGGCC      2400
     ATGTAAGAAA CCTTATAAGT AATGAGCAGA CGATTGCTGC AATCATTACC CAACTGTCAA      2460
     GTGCAGTAAA AGGAGAATCG GTAGAAGTGA TATCTGCCAA GCTTCTGAAT CTACAACAGA      2520
     GAAATAAAAC GGCTAACCAA TACACCCAAG AGGTGGAGAA ACTGACAAAG GCCCTTGAAG      2580
     GTGCCTATAT CAGTGAAGGT CTCAGCCAGT CCTTAGCAAA TAAATACAGC ACTACAACAG      2640
     CTGTAAAAGC AATGACACAG AATTGCTCCA TTGATAAGGT AAAACTTATC ATGCAAGCAG      2700
     GCACATTCAC AAACATGAAT GATGCCATCT CCAAATTTGT AAACAGTTGC ACAGAGATAA      2760
     CAGGTCAAAG TAACACTGTA CTCTATTATC GACGAGGTGC AAATAATTAT AATAGAGGCG      2820
     CCCGGGGTTA TAATCGTGGT AGAAATATCA ACCACAACAA TTACAACCGA GGTAGCAATA      2880
     ACAACAATAA TAATAACTAT AATAACCGTG GAGGTAGGCG AGGCCAAAAC CAAGGGAGAG      2940
     GCCGCGGAAA CTACAACCAT GGTAATAATA ATAATAGCAG TGTGAGAATC GCGCAAAATA      3000
     CGTCGGAAAA CTAACAGAAC CCTTTAGGAA ACAACCAATA AATGTAAAAG TTCATTCCAT      3060
     CAATTATAGT CTTAATATAT TCGTAACCTT CTATAATCAT TCCACTGAAA ATAAACTAAC      3120
     ATTTCTCATA GATACTGGTG CAGATATCTC ACTTTTGAAA GTAAATTCTG ATAACTTCGT      3180
     AATTCAAAAT GAAAAAATAA TAAACATCGA AGGCATAGGC CAAGGTGTGA TAAAGTCTCA      3240
     AGGAACAACC TTAATAGAAC TCCAATCAAC AAAATATATT ATCCCACATG AATTTCATTT      3300
     GGTAAACCCA AATTTTGCAA TACCATGTGA TGGAATAATA GGCATTGATT TTATAAAGAA      3360
     ATTCAATTGT CAACTAGATT TCAAACCAAG TGAAGACTGG TTTATAATTA GACCCCAAAA      3420
     TTTAAATTAT CCAATATATG TCCCGATAAC ATATAGCGCT GGCAACAATA CAGTTCTTCT      3480
     GCCAGCCAGA TCACAAGTTA TTCGGAAAAT AGACATTAAT GTTGTAAATG ATTTCATATT      3540
     TGTTCCTAAT CAAGAAATAC ACAATGGGAT TTATGTTGCA AATACAATAG CAGCATCCAA      3600
     ACATGTATAC GTTCGACTTC TAAATACAAC TAATTTCGAC CAAGTGGTCA AAGTAAATAA      3660
     AATACAATAT GAAAATCTAA AAGATTATGA CATTCATAAT ACCGACACTG GAAATAGAAG      3720
     CGAACAAATA CTTTCAAAAC TAAAGAAAAA TTTTCCAGAC CAATTTAAAA ATCAATTAAC      3780
     AGAATTATGC ACACAGTATA GTGATGTGTT CGGACTGGAA ACCGAACCTA TATCAACAAA      3840
     TAATTTTTAT AAACAAACAT TAAGACTTAA AGATGATGAA CCCATTTATA TAAAAAACTA      3900
     TAGAAGCCCG CATAGCCATA TTGAGGAAAT TCAAAAACAA GTAGGGAAAT TAATAAGCGA      3960
     CAAAATCGTC GAACCGTCTG TATCTGAGTA TAACAGCCCA CTCTTGCTAG TTCCAAAAAA      4020
     ATCATTACCA AATTCACAAG AGAAAAAATG GCGATTAGTA ATTGACTATC GTCAAATAAA      4080
     CAAAAAACTT CTTTCTGACA AATTTCCACT CCCTAGAATT GATGACATTT TAGATCAACT      4140
     AGGTCGAGCT AAATACTTTT CATGCCTTGA CTTGATGTCA GGTTTCCATC AAATAGAACT      4200
     TGAGGAAAAC TCTAGGAATA TAACATCTTT TTCAACGAGC AATGGCTCAT ATCGCTTCAC      4260
     GCGATTACCA TTTGGTCTTA AAATAGCACC AAATTCATTT CAGAGGATGA TGACTATATC      4320
     ATTCTCGGGA TTAGAACCCT CTCAGGCATT CCTTTACATG GATGACTTAA TGGTGATAGG      4380
     ATGTTCCGAA AAACACATGA TTAAAAACTT AACTGACGTT TTTAATGTAT GTAGGAAATA      4440
     TAACCTAAAG TTGCATCCAG AAAAATGTTC ATTTTTCATG CACGAAGTGA CATTCCTAGG      4500
     TCACAAATGC ACAGACAAAG GAGTATTGCC AGATGACAAG AAATATGACG TCATCAAAAA      4560
     TTATCCTGTC CCTCATGATG CGGACAGTGC AAGACGATTT GTAGCATTCT GCAACTATTA      4620
     TCGTCGATTT ATAAGGAACT TCGCCGACTA TTCACGGCAC ATAACTAGAT TATGTAAAAA      4680
     GAATGTCCCT TTTGAATGGT CAAGCGAATG CCAGAACGCA TTCGAATACC TAAAAGAAAA      4740
     TCTTATGCAC CCCACACTAT TACAATATCC TGATTTTCGC AAAGAATTTT GCATTATAAC      4800
     GGATGCTAGT AAACAAGCTT GCGGAGCGGT TCTAACTCAG AACCGAAACG GGATTCAGCT      4860
     CCCAATAGCT TATGCATCAC GTTCATTTAC AAAAGGAGAA AGCAATAAGA GTACAACGGA      4920
     ACAAGAACTA GCGGCAATCC ATTGGGCAAT TACCCATTTT AGACCATACA TTTATGGCAA      4980
     GCATTTCACC ATTAAAACGG ACCACAGACC ATTAACGTAC CTATTTTCTA TGACTAATCC      5040
     CAGTTCTAAA TTAACTCGCA TGCGGCTAGA ACTAGAAGAA TACGACTTCA CAGTAGAATA      5100
     CCTAAGGGGG AAAGATAATT TTGTAGCAGA CGCACTCTCA CGTATAAATA TAAAGGAACT      5160
     CAAAGACATG CAACATAAAG TCCTGAAAGT CACTACCAGG CAACAAAGTA GACAAGAAAA      5220
     CTGTACAGTA ACAAACAAGG AACTATTGCC TAGGCAAAGT ATCCAAAATG TATCTAAGCC      5280
     CAACGTACAC GAAGTCATAA CAAATGATGA AGTACGAAAA GTAGTGACCT TGCGAATAAC      5340
     TGAATCTATT TGTTTACTAA AACGAGGAAA TAAAGTTATT GCAAGAATTG ATGTTGACGA      5400
     TTTATATACC AATGGAATTT TTGATTTAGG TCAGTTCTTC CAAAGGCTTG AAATGCAAGC      5460
     CGGTATACTA AAAATCAGCC AACTCAAATT GGCACCGAGT GAAAAAATCT TTGAAACCAT      5520
     TTCAATAGAT AATTTCAAAA ATATGGGCAA TATAAAATTG AAAACATTAA GAGTAGCGCT      5580
     ACTCCAGCCG GTGACCATTA TAAAAACTGA AAAAGAGATA CAATCGATAC TGTCTACATA      5640
     TCACGACGAT CTAATTCAAG GAGGTCATAC AGGCATTACA AGAACGCTAG CGAAAATAAA      5700
     AAGACACTAT TATTGGAAAA ATATGACTCG TCATATAAAA GAGTACATAC GTAGATGTCA      5760
     TAAATGCCAA ATGTCAAAAA CAACGACACA TACAAAGACC CCATTGACTT ACACAGAAAC      5820
     CCCAACAAAT GCTTTTGATA TAGTGATAGT GGACACAGTT GGTCCACTAC CGAAATCAGA      5880
     ATATGGCAAC GAATACATCG TCACACTAAT ATGTGATTTG ACGAAGTATC TAGTAACCAT      5940
     ACCTGTTGCG AATAAGAGCG CAAATACTGT CGCAAAAGCT ATATTCGAAA ATTTTATACT      6000
     AAAGTACGGT CCAATGAAGA CGTTCATTTC GGACATGGGT ACCGAGTATA AAAACAATGT      6060
     AATTCAAGAT ATGTGTAAAT ATATGAAAAT TGAAAATCTT ACATCCACTG CATATCACCA      6120
     CCAGACTTTA GGGACAATCG AACGAAGTCA TAGAACATTC AATGAATACA TTCGTTCATA      6180
     CATCTCTGCA GATAAAACTG ATTGGGACGT TTGGATACAA TACTTTACAT ATTGTTTCAA      6240
     CACAACACCA TCAGTCATGC ATAATTACTG TCCATATGAA CTAGTCTTTG GAAGATTACC      6300
     AAGGCAGTTC GCAAATTTTA ATAAAACAGA TAGAATAGAA CCACTGTATA ATATAGAAGA      6360
     TTACTCAAAG GAAATAAAAT TTAGATTAGA AATAGCATAT AAAAGAGCTA GACTTTTGTT      6420
     AGAAAAAGCT AAGTCTTATA GAAAACAACT TTATGATAAG AAAACTTCAG ATTTTCAATT      6480
     AAAAATAGGA GATAAAGTTA TACTAAGGAA CGAATCGGGT CATAAGTTAG ATCCAGTATA      6540
     TATAGGCCCT TATACTGTAG AAACCATAGA AGACAGAGAT AACATAGTAA TTAGAGATAC      6600
     AAAACAAAAG AAGCAAAAAG TACATAAGGA TAGACTAAAA ATATATAATC AATGAAACGT      6660
     TTCATTTCAC TTAAGAAAAG GTCTGATCAA CCTCAAAACA AAAAAAAAAA AAACACAAAA      6720
     AAAATTTAAT TACTATTTTT CCTTCTAAGA AAGTTAAACA TAAATCCAAA AACATCGTAA      6780
     TTCAACATAC ATTTTTTGTA TTATTCTGTC ATTATACAAA AATGCTTTGA GACAAAACAT      6840
     TGCTAATAAT TAATAAGAAA AATCAATTTC AAAAAAATTT TTTCCTTTCT AAACACAATA      6900
     TTAATATTGA GAACTCAATG ACTACATATA TTACGTCATT TCTTTAAAAA GGGAGGTGTA      6960
     GCATATTGGA CTAATCTACC CTAAGAATAC AATAGATGAT TGGGTATAAC ATAGCGTCAA      7020
     TACATTGTGA CACTTTGTCA TAATAAATAT AAATATACAA ATATACAAAA AGACCACCAA      7080
     AAACTACGTA AGCACTCCAG CGCCCCAGTA ATACGATCTA ACGCTTATAC ATAAGCCGAT      7140
     CGCGGAGCGT GGGAATGCTG AGCATGCACT TTGCAGCTCA AGTGGTCAAT GCCTTCTGCA      7200
     TGCATATGTA TATGTATAAA TGTAAGTAAG AATACATAGA TATAAGCAAT GTATGTGCGG      7260
     GTTAGCTGAA CCCAACTTCA GCACACTTTG ATCATTCGAA TAAACAGATT CAAACAGAGC      7320
     AGAGGTTCTG AGCTCGGAAA CCAAATCTTT TACATCTAT                             7359
//
ID   HOPPER2    standard; DNA; INV; 1593 BP.
XX
AC   AF541950;
XX
DR   FLYBASE; FBgn0067381; hopper2.
XX
FT   source          AF541950:1..1593
XX
CC   Sequence from BDGP, August 2002.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 1593 BP; 507 A; 301 C; 250 G; 535 T; 0 other;
     ATAAAAGTTA AAAGTTTCTA AAGTTAATTT TCAATATTAA TATTGTCTAA AATTTCATAG        60
     TCGTCTTCCT CTTCACAATC AGCAGAGTCT GAAGAATCGT TATCAGGTTC GAAAGCTAAC       120
     ATTTGAATGA CTTCTGGGGA AAGAGGCAGT CGCTTATGTT TTTGAACGCG CCTCCTTAAA       180
     TTAATTGATT ATATTATGGG ATCCGAAGTA TCCTTTGCTC TGTGAAAGAG ATCTGCGAAG       240
     CTACAAATAC GATTATGCTT TCTTGAATGG TGAAGTCTGT CCGACTTGTA AATTTTATTC       300
     CTAGATTCTG CTGCCTCTTC TCCAAAATAG TCGAACTGTT TGCTCCAAGA TATTTTTGAA       360
     GTGAACCAAT ATTTTGTGGA CTGTCGCTGT CATGGGAAGC CATGGATATT TGTCAACAAT       420
     AATTTGTGCA GTTGTATGAC AAAGCTGCTC ATATTTTTCA AGGTCTATAG GTAATAGACA       480
     TGACAGACAT ATTAATATTG TCCTCATATT AAAAATGAGC TGGATGTCAA CGCCTGTTAT       540
     TTCGGAAAAT GCCTTATAGT TATTAAATGC ACGACGCGCC GTATTGTCAA CATTAGAACT       600
     ACCGAATCCG CCTTGTTTTG GTTGATCAAC CTTAAGCGAT AGTTTTTCCC AAAACATTCG       660
     CTGGGTGCAT TTTTTTCGCT CTAACTCCAT ATTTTTTTAT CAATTCCACC CACGATTCTC       720
     CACTTTTTTA CTACAGTTTT GTACCCCATA TTTGGTACAA ACGCCGAAAA TCTACAATCT       780
     TCCAACAAGG AAGTGGACTT AATCCATATT TTAAATTTCC TTGAATTTCC TTCTTTTACC       840
     TTAAGGAGTA GGTGTTCTTC TAACCACTTT GAATAAACTT TCGAAAATTC GTTTAATTTC       900
     GATAGCATTT TCTCAAATTT CGGAAAAGAT TTACTGAAAA CATTCTCGCA TTTTCCTTTA       960
     GGTATCGTTC ATTAAAGTCT AGCTTGCTAT CAGAAAAATG CCCACTGATA AAAGTGTAAA      1020
     AAGTATTTTC CTTTTGACGA AAACCCTTTT GCTTGCGCCA CACTTCCAGC AGGTCAGCAC      1080
     TGGCAATCGA GATATTGCTT CCTAAAACAT AATATTTCTC AAAAAACCGC AAACGCACAT      1140
     AGAGACTACA TGATATGAGC TAAGAATTGA ACACACTACA ACATGGATAT AAACACTTAC      1200
     TGAACAAATT TGAACAAATT GTTGTAGCTC TCTTCAAAGT TGCAATTTTT TTCAAACAGC      1260
     TACATGTGGA CATCACTTGC TAAATGTACA AATAGTTAGT AGTAGACGCA CACAATAAAC      1320
     AATATATTAA CAGGAACACA TAATACAAAC CTGAAGATTG ATTATCCATT TCAAATTATA      1380
     CTCTTTTGCG ATCTTCTTTT TAATTTCTAA CACTTTGAAA GTTAAGCTAA ATGCAGCCAC      1440
     GTGGTATGTG CTCGCAACAG CTGAAATTAA CAGCTGTTAT TATAATGGTG CGCTGTTAAA      1500
     TTAACTTTTG CGGGCTGAAA CATAACAGTT TAGAGTATTT CCAATATATT AATACTAAAA      1560
     TACTGCAAAT TTGCATACTT GTGAAAAAAC ACA                                   1593
//
ID   STALKER2 repbase; DNA; INV; 7672 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063455; Stalker2.
XX
SY   synonym: new-Stalker
XX
FT   SO_feature      five_prime_LTR ; SO:0000425:1..424
FT   SO_feature      three_prime_LTR ; SO:0000426:7248..7672
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 7672 BP; 3078 A; 1430 C; 1194 G; 1970 T; 0 other;
     TGTAGTGTAT CTACCCTCAC TATAACTCTA CTCTACATAT ATATAAGTAA CGTACATACA        60
     TTGTGACACT TTGTTGCAAA CACAAATAAA CATAATTCAC ATCAAAGACC ACATGCACTT       120
     ACATAAACAC TCCAGCCAAT GAAATACGAT CTAACGCTTA TACATAAGCC GATCGCGGAG       180
     CGTGAGAATG CTGAGCATGC ACTTAGCAGC TCAAGTGGTC AAGCCATACA TAACATATGT       240
     ATGCCTTCTG CATACACATG TATATGTATA TACAATATGT ACAATATGTA AGAACACCAT       300
     GTACGGGTAG CTGTACCCAA AGACAGCAAC ATAGGATTCA TTCAAATAAA ACGATTCAAA       360
     CGGAACAGAC GCTCTGAGCT ATTCAATATC TATTACACTG AGCTATTACT TATTACTTAT       420
     TACATGGCGA CCGTGACTTG GTCTCGAGTC TGCCTCTGTG TTGTGCCTCT GTGTATTGTG       480
     ATTATGTATC GTGTATTGTG TTTGTGTTAA AAAAAAAAAA AAAAACAACA TTTTGTGCCT       540
     ATTATATTCA ACGTGTGAAC ACACAAACAT AACTAAAATG TACTTGTAGT ACTTGGACGC       600
     ATTAAATGCA AATATATGTT CAATTGAAAC AAACAAAGCA CAAAAACACA CAAAAACACA       660
     CACAAAAACG CACAAAAACA CGCAAACACA GCACACACAG AAGAACAAGC GGCGATTGAT       720
     GGCAGACGAG CCACAATTCG CCAATGCACA ACCACAAGTG CAACGGGACC AGCCAACGCT       780
     AGAGGAAGCG TTGCGGTTAA ACAACGCCGA TGGACCACGC CCACTCACAG TAGCTGAGTA       840
     CCGGGCACGG CAGGAGAAGA AACAACTACG AAAGCACAAA CGCTCAGGAC GGAGGATTAA       900
     ACTACTACAA CAACGCCGAC TGGTCAAGGA AATGACCCAG TTGGCAAAAG AAGAATCAGC       960
     ACGACAACGC TACCAAGAGC GTTTGGAAGC CATTGAACAA GAACTTCGCC AAAGTGCGAA      1020
     GACACGCAAA CGGGCTGCTT AAATGCAAAT GCCCCAATTT GCCCTAGAAT TAAAATAAAC      1080
     CCAAGCCCGA GGCGGGAAAC CGCTGCTTGA AAATACTAAC AAAACTTTAT GCTAGGCTTT      1140
     ATACTAAAAA ATGTGGTTGG AGATTTTTTT TTTAAAATCC TATTGAATTG TAAATTGTGA      1200
     CTTGTGAGCC AACCACATTA GCACTATCAA ATTTCCATGT CTCTGCCACT GAGTATATAT      1260
     ACTCAGTTGC AAATAATTTG TGTAACTTTA ACAACTTTAA ATTTTCTATT TCAAAAATAA      1320
     AATTTTACAT TTTAAATTTA AATGAATAAC ATTTTAAAAA TGGATTAAAA AAAAAAAAAA      1380
     AATAACTTTC TTAAAGAGAA TTTTCTTTCT AAAAATACAA GAAAAAATAG ATTTTTATTT      1440
     TTCATATTAT ATATATAATA ACATTATATA TAATACTTCA AAAAAAAAAA CGTTTCATTG      1500
     AATATATAAA AATATTCAAC ACAAATTAAA ATAAATTTTC TCCTCAATTT AAAATTACAC      1560
     AAATCAAACA AAAATTAGAA ATAAAATTAG GAAACCTAAT AAGTAAAACA ATTATATTAC      1620
     ATGTCATTAA AATTGAATGA GCATTAAAGA TAATTCCATA CCGAAGATAG ACCCCCTAAA      1680
     GACAATCATT TCGGAACTGT CTACTATGTT AGACAAAAAT TCCAATATAG CGGACTCCAC      1740
     CGCAAACGTA ATCAATACAG TTCAGGTATC ACAGCCCGAA CTTAAAATAA TTACGGTACT      1800
     CCTCATAATA ATAGTAGTAC TGCTATGTGC GAGTATGATA ACGAAATTGT ACAAACTACA      1860
     TAACAGATGC CTCAAGAAGA AATACTTGAG TAAGGCATTG GACCTAGATA AGGTCTAAAG      1920
     TAGTACCCTG CGTACAAATT TCGAATATTC AATTAAATAG AAATTATCTT TACATATATA      1980
     TATATAAAAA AAAAAACAAT ATCAAACCCA CTATAACTAG GGTCAACAGA AATAATAACA      2040
     GTTGGTAAGA ATTAGAGCAT GGAATGGCAT GAAATATGCA CAACAATTAA AAATATTAAA      2100
     ACTAAATTCG ATAAGACATA TAAATGCTTA TCTGCCCAAT AGGCCTATAC AGGCTGAAAC      2160
     AATTAAAAAA CATGCATCTA CATTAGTCGA CTGCTTTAAT GAAGCACGAA CACTAATATA      2220
     CGAACATAGA GAAACACTTA ATTCTGAACA CTGGTCTAAG TTATCAAGAC TATTAATCAA      2280
     ACTTCGATTA AACTTGATAG CAGTTAAAAG GAAATTTAGT TTGGAAATTT CAATTCCAAC      2340
     AATACTAAAT ACCCCTTTAA CGATTGATAC AGACGAACAA TCTGAATCAA TAGAACCAGA      2400
     AGAAATCGAT TTAGAGGTCA CCGAGTCGGA AGAAAAATAT ACCGACATCG AGGATAAAGA      2460
     CCTACTAAAC CTAACAATTC CAGCTATATT AACATTAGCT GAAGACACTA ATCAGGAAAA      2520
     ATTTAAAACA GAAAACATAA TGGGCACAGT CCAATATTGA TTTTCTGAAT ACAGCATCAA      2580
     AGCTTATACC CGACTTTGAC GGTAAGGCTG AAAACTTAAC AAGTTTTATA GATGCTCTAA      2640
     ACATTGTAGA TACAATCAAA GGTGAGCATG AGTCTCTAGC TGTTTCGGTT ATAAAAACCA      2700
     AACTTAAAGG CCATGCAAGA AACCTCATAA GTAATGAGCA GACAATTGCT GCAATCATTA      2760
     CCCAACTGTC AAGTGCAGTT AAAGGAGAAT CGGTAGAAGT TATATCAGCT AAGCTTCTCA      2820
     GTCTCCAACA AAAGAGTAAA ACGGCCAACC AATACACCCA AGAGGTGGAG AAACTGACAA      2880
     AGGCTCTTGA AGGCGCCTAT ATCAGTGAAG GTTTAGGCCA AACTCTTGCC AATAAATACA      2940
     GCACTACCAC AGCTGTAAAG GCCATGACGA AAAATTGCTC CATTGATAAG GTAAAACTTA      3000
     TCATGCAAGC AGGCACATTC ACAAACATGA ATGATGCCAT ATCTAAATTT GTAAACAGCT      3060
     GCACGGAGAT AACAGGTCAG AGTAACACTG TACTCTATTA TCGACGAGGT GCAAATAACA      3120
     ATAATAGAGG GGGCCGAGGT TATAATCGCG GCAGAAATGG CAACAATTAC AACCGAGGCA      3180
     ACAATAATAG TAATAACTAT AACAACCGTG GAGGAAGACG AGGCCGAAAC CAAGGTAGAG      3240
     GCCGCGGCAA CTCCAACCAA GGTTACAATA CCAACAATGT GAGAGTGACG CAAAACACGT      3300
     CGGAAAACTC ACAGACCCCT TTAGGAAACA ATCAATAAAT GCTAGAGTTC ATTCCATCAA      3360
     TTATAGTCTT AATATATTCG GTAACTTTTT ACAATAATTC AACCTGATAA CAAGTTAACA      3420
     TTTCTCATTG ATACTGGTGC AGATATCTCA CTTTTAAAAG TTAATTCAGA TAACTTCAAA      3480
     ATTCAGGATG ACAAAATAAT AAACATCCAA GGCATAGGCC AAGGTGTAAT AAAGTCTCAA      3540
     GGAACAACCC TAATAGATCT TCAATCAACA AAATATATTA TTCCACATGA ATTTCATTTG      3600
     GTAAACTCAA ATTTTTCAAT ACCATGTGAT GGAATAATAG GCATTGACTT TATAAAAAAA      3660
     TTCAATTGCC AACTTGACTT CAAACCAAGT GAAGACTGGT TTATAATTAG ACCCCAAAAT      3720
     TTAAATTATC CAATATATGT CCCAATAACA TATAGCGCTG GCAACAATAC AGTTCTTCTG      3780
     CCAGCCAGAT CACAAGTTAT TCGGAAAATA GACATCAATA GCGTAAATGA TCAAATATTC      3840
     GTTCCTAATC AGGAAATACA TAATGGAATT TATGTTGCGA ATACAATAGC AGCATCAAAA      3900
     AATGTATATA TTCGACTTCT AAATACCACT AATTTCGACC AAATGGTCAA AGTAAACAAA      3960
     ATCAAATATG AAAATCTTAA AGATTATGAC ATTCATAATA CCAATCTAGA AGATAGAAGC      4020
     GAAAAAGTAC TATCATTACT GAAGAAGAAT TTTCCAGAAC AATTTAAAAG TCAATTAACT      4080
     GAATTATGCA CAAAGTATAG TGATGTGTTC GGACTGGAAA CCGAACCCAA TATCAACAAA      4140
     TAATTTTTAT AAACAAACAT TAAGACTTAA AGATGATGAA CCCATTTATA TTAAGAACTA      4200
     CAGAAGCCCG CATAGCCATA TCGAAGAAAT TCAAAAACAA GTAGGGAAAT TAATTAACGA      4260
     CAAAATCGTA GACCCATCTG TATCTGAATA TAACAGCCCA CTCTTGCTAG TTCCGAAAAA      4320
     ATCATTACCG AATTCAGAAC AAAAGAAATG GCGATTAGTA ATTGACTATC GTCAAATTAA      4380
     TAAGAAACTA CTTTCTGATA AATTCCCACT CCCTAGAATT GATGACATTT TAGATCAACT      4440
     AGGTCGAGCT AAATACTTTT CATGCCTTGA CTTGATGTCA GGTTTCCATC AAATAGAACT      4500
     TGAAGAAAAC TCAAGAAATA TAACATCTTT TTCAACAAGC AATGGCTCAT ATCGCTTCAC      4560
     GCGATTACCC ATTTGGTCTC AAAATAGCAC CAAATTCATT TCAGAGAATG ATGACTATAT      4620
     CATTCTCTGG TTTAGAACCT TCTCAGGCAT TCCTTTATAT GGATGACTTA ATGGTGATAG      4680
     GATGTTCCGA AAAACACATG ATTAAAAACT TAACTGATGT TTTTAATATA TGTAGGAAAT      4740
     ATAACCTAAA GTTGCATCCG GAAAAATGTT CATTTTTCAT GCATGAAGTG ACATTCCTAG      4800
     GTCACAAATG CACAGACAAA GGGAGTTTTG CCAGATGACA AAAAATATGA CGTCATCAAA      4860
     AATTATCCTG TCCCTCACGA TGCGGACAGC GCAAGACGAT TTGTAGCATT CTGCAACTAT      4920
     TATCGTCGAT TTATAAAGAA CTTCGCCTGA CTATTCACGG CACATAACTA GATTATGTAA      4980
     AAAGAATGTT CCTTTTGAAT GGTCAAGCGA ATGCCAAAAC GCATTCGAAT ACCTTAAAGA      5040
     AAAGCTTATG CACCCCACAT TATTACAATA TCCTGATTTT CGCAAAGAAT TTTGCATCAT      5100
     AACGGATGCT AGTAAACAAG CTTGTGGAGC GGTTTTAACC CAGAACCGAG ACGGAATTCA      5160
     GCTCCCAATA TCTTATGCAT CACGTTCGTT TACAAAAGGG GAAAGCAATA AGAGTACAAC      5220
     GGAACAAGAG TTAGCGGCAA TTCATTGGGC AATTACCCAT TTTAGACCAT ACATTTATGG      5280
     CAAACATTTC ACAATCAAAA CAGATCACAG ACCTTTAACA TATCTATTTT CTATGACCAA      5340
     TCCCAATTCA AAATTAACTC GCATGCGACT AGAGCTTGAA GAATACGACT TCACTGTAGA      5400
     ATACCTAAAG GGAAAAGATA ATTTTGTGGC AGATGCACTG TCACGTATCA CTATAAACGA      5460
     GCTGAAAGAC ATATCAGCAA ATGTACTAAA AGTCACTACA AGACAGCAAA GTAAACAGAA      5520
     AAATATCTGC GCAGATACTA ATATAAATAA ACAAGAAGAA ACTCTTGTTA ACGCTTCTAA      5580
     GCCCAACGTA TATGAAGTCA TTAATAATGA CGAAATACGA AAAGTAGTGA CTCTGCGAAT      5640
     AACTGAATCA AAATGTTTAT TCAAACATGG AAATAAAGTT ATAGCAAGAA TTGATGTTAG      5700
     CGATCTGTAC ACCAATGGAA TTCTAGACTT AGGTCAGTTC TTCCAAAGGC TTGAAACACA      5760
     AGCCGGTATA CATGAGATCA GCCAACTCAA AGTGGCACCG AGCGAAAAGA TCTTTGAAAC      5820
     AATTTCAATA GACTCTTTTA AAAAAATGGG CAATAAATTA TTGAAAATAT TGAGAGTAGC      5880
     CGCTACTCAA GCCGGTGACC CAAATATATG ATCAAAAAGA TCAAGAAGCG ATACTGTTTA      5940
     CATACCATGA CGATCCAATT CAAGGAGGTC ATACAGGCAT TACAAGAACG CTAGCAAAAA      6000
     TTAAAAGACA TTATTATTGG AAAAATATGA CACGGTCATA TCAAAGAGTA CGTTAATAAA      6060
     TGTCAAAAAT GCCTTACGTC TAAAACAACG ACGCATACAA AAACACCCCT TACAATAACG      6120
     GAAACACCAA CTTGCGCTTT CGACAGAGTG ATAGTAGACA CTATAGGTCC ACTACCCAAA      6180
     TCGGAAAATG GTAATGAATA TGCAGTCACT CTAATCTGTG ACTTAACAAA ATATTTAGTT      6240
     GCCATACCAA TTCCCAACAA AAATGCAAAT ACAGTCGCAA AAGCTATATT TGAATCATTC      6300
     ATTCTGAAGT ACGGTCCAAT GAAGACGTTC ATTACGGACA TGGGAACAGA ATACAAGAAT      6360
     AGCATTATAG CCGACTTATG CAAATATCTG AGAATAGACA ATATAACGTC TACAGCACAC      6420
     CACCACCAGA CATTAGGTAC CGTTGAAAGA AGTCATCGAA CCTTCAATGA GTACATTCGT      6480
     TCATATATAT CAGTAGATAA AACTGACTGG GACATATGGT TACAATATTT TGTGTACTGT      6540
     TTTAACACTA CACCATCCGT AACGCATAAT TACTGTCCAT ATGAACTAGT ATTTGGTAAG      6600
     ACTAGTAATT TAGCAAAACA ATTTAGTAAC ATAGATAATA TAGACCCTAT ATATAACATA      6660
     GATGATTACG CTAAAGAAGT TAAATTTAGA CTAGAAAACG CGTATAAAAG AGCACGCATA      6720
     TTATTAGAAA GAAATAAAGT AAAACAGAAA ACCAGTTATG ATAACAAAGT TAGCGATTTT      6780
     AAACTAAAAG TAGGAGATAA CGTTTTAATA AGAAACGAAA CAGGTCACAA ACTAGAACCA      6840
     ACGTATCTAG GGCCATTCGA AGTAATTAGA ATCGAAGAAA CCAATAACAT AGTAATTAGG      6900
     AATAAAAAGA CCAAAGACCA GAAAGTTCAT AAGGATAGGT TAAAAATATA TAATTAATGA      6960
     AACGTTTTAT ACAAAATAAA TAACTAAAAA AAAAAAAAAA GGGTCTGATC AACCGAAAAA      7020
     AAAAATTTAA TAAGTTTTTG TCTAAGAAAG TTAAAAATAG AAGCATAACG TAATTATAAC      7080
     CCCCCCAAAA AAAAAAAAAA TATAAAAAAA AAAAAATTCT TTTACACAAA TTATTCTGAG      7140
     ACCAAACTTT TTCTAATAGA AAGGATAAAT AAGAAATAAT ATAAGAAAAA AAATGTTTTA      7200
     ATTAATTAAA TGACTACATA TATTACGTCA TTTCTCTAAA AAGGGAGGTG TAGTGTATCT      7260
     ACCCTCACTA TAACTCTACT CTACATATAT ATAAGTAACG TACATACATT GTGACACTTT      7320
     GTTGCAAACA CAAATAAACA TAATTCACAT CAAAGACCAC ATGCACTTAC ATAAACACTC      7380
     CAGCCAATGA AATACGATCT AACGCTTATA CATAAGCCGA TCGCGGAGCG TGAGAATGCT      7440
     GAGCATGCAC TTAGCAGCTC AAGTGGTCAA GCCATACATA ACATATGTAT GCCTTCTGCA      7500
     TACACATGTA TATGTATATA CAATATGTAC AATATGTAAG AACACCATGT ACGGGTAGCT      7560
     GTACCCAAAG ACAGCAACAT AGGATTCATT CAAATAAAAC GATTCAAACG GAACAGACGC      7620
     TCTGAGCTAT TCAATATCTA TTACACTGAG CTATTACTTA TTACTTATTA CA              7672
//
ID   STALKER3 repbase; DNA; INV; 372 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0063454; Stalker3T.
XX
FT   SO_feature      long_terminal_repeat ; SO:0000286:1..372
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 372 BP; 138 A; 73 C; 73 G; 87 T; 1 other;
     TGTAGTGTAT CTACCCTCAA TATGTArAGT AGAGTTAATA TGTAAGTAAG TAATATGTAA        60
     AGTAGAGTTA ATATGTAAGT AAGCAAAAGA CCACCAACAC TTACATGAAC ACTCCAGCTC       120
     TTGAAATACG ATCGAGCGCT TAAACATAAG CCGATCGCGG AGCGTGAGAG TGCCGAGCAT       180
     ACACCTAGCA GCTCAAGTGA TTAAGATAAG ATAAGATAAG ATAACAAACA CGTAGTCTTA       240
     AGCGCGTCAT GTGCGGGTGG CTGTACCCAA GAACAGCAAA GTGAATTCAT TCGAATAAAC       300
     CGCTTCAAGC AGAGCAGAGC CAAGTCTATT ATATCAACTT CAAAAATACC GTATAACCTT       360
     GAACCTATTA CA                                                           372
//
ID   AF541951   standard; DNA; INV; 1064 BP.
XX
AC   AF541951;
XX
DR   FLYBASE; FBgn0064134; Bari2.
XX
FT   source          AF541951:1..1064
FT   SO_feature      five_prime_LTR ; SO:0000425:1..119
FT   SO_feature      three_prime_LTR ; SO:0000426:946..1064
FT   SO_feature      CDS ; SO:0000316:565..873
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:;"
FT                   /protein_id="AAN34654.1"
FT                   /translation="MKEVDINSYEKRLSFALEYKEKPIEFWFDVLWTDEIGFQFQRSFS
FT                   KKFMHFPKKLKVECRPANQSIWWWHGDVLGLFKLLWIWRHGTDRGYNKSNRIPPYLK"
XX
CC   Derived from AF541951 (Rel. 73, Last updated, Version 1).
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 1064 BP; 373 A; 172 C; 201 G; 318 T; 0 other;
     aacgaaagaa gaagtggaaa aaataactgt ttattggcta aaaatagaag cattgaactg        60
     atccttgtct gttgtcaaaa gtatttacac acaattttta cgcgtcaaaa ttatttacac       120
     agttcaaatt gaagattagt ctttgatttg cattgagtaa gtgaagttct agttgatgtt       180
     gatcgcttaa ttggaactta aactaactgt taacaggtaa gttaatagat aaaactaagc       240
     atataatttg taaaatggca aaaacaaagg agctatcagt tgggcatcga gtcgagattg       300
     tcactaaact taagactggt tcttctgcat ccaaattagc tgagttgtac aaaatatcac       360
     gtaaaactgt gtacaattta gttaaaaaaa aggacactgg gaaatttgga aaattaaaag       420
     aaacctggcc gaaaagttgc attgaaccca agactgcaga cacattattg gagttgtact       480
     cagtaatccc accattagtc ccgttttaat tgccgcagct tcgaaaaatt taattggaaa       540
     acatatagta cactgcgtcg cagaatgaag gaagttgaca tcaactccta tgaaaaacgt       600
     ctctcatttg ccttggagta taaagagaag cctatcgagt tctggtttga tgttttatgg       660
     actgatgaaa ttgggtttca gtttcagaga tcctttagca agaaatttat gcatttccca       720
     aaaaaactaa aggttgaatg ccgtccagct aatcaatcga tttggtggtg gcacggtgat       780
     gttctggggc tgtttaagct actttggatt tggagacatg gtaccgatag agggtacaat       840
     aaatcaaaca ggatacctcc atatcttaaa tgagcacgca ttcacctcag gaaatagact       900
     gttctccacg aaaaaaaaac gcaaaaaaca attaaaaaag ctgtatgtaa ataattttga       960
     cgcgtaaaaa ttgtgtgtaa atacttttga caacagacaa ggatcagttc aatgcttcta      1020
     tttttaaacc ctaaacagtt attttttcca cttcttcttt cgtt                       1064
//
ID   DME487856  standard; DNA; INV; 8556 BP.
XX
AC   AJ487856;
XX
DR   FLYBASE; FBgn0063919; Max-element.
XX
FT   source          AJ487856:73..8628
FT   SO_feature      five_prime_LTR ; SO:0000425:1..321
FT   SO_feature      three_prime_LTR ; SO:0000426:8236..8556
FT   SO_feature      polyA_signal_sequence ; SO:0000551:282..287
FT   SO_feature      polyA_signal_sequence ; SO:0000551:8445..8450
FT   SO_feature      primer_binding_site ; SO:0005850:394..411
FT   SO_feature      RR_tract ; SO:0000435:8296..8305
FT   SO_feature      CDS ; SO:0000316:1710..7202
FT                   /db_xref="FLYBASE:FBgn0063918; Max-element\gag-pol"
FT                   /protein_id="CAD32253.1"
FT                   /translation="MPLEGDKKKTPAPGKEQKFNPQSPISTRGRPAPKSVSPRVKTATP
FT                   TPKPKVLPSTSSKTTPRLVISRPVTRASSESSLSRKSESPSAVGTDFLRVTRSTTKRMA
FT                   SSEQPTPANAALHKFIAVSDRVSLFEAKINTPDQASPSLHTLQVRLQQVRALWDKVERE
FT                   YETCSDLMAQEGSLDTVPILQAKYDYCYSVYESCAAQIGETIDRATPQVAQAPSQPLIS
FT                   SGCRLPPCDTEVFDGDYLRWPTFRDLFTAIYVNNPRLTPVEKLFHLLTKTSGEAKAIVA
FT                   KSPLTNDGFASAWEALRDRFQNKRLLVNSQLKLLFNLSSISQESGHALKELQSTIQGCL
FT                   TALEHSQVSTENWDCILVFLCASKLPKQTLSLWEQSLTAKSEIPAWEEMNAFLSERYRT
FT                   LEAIEDMKPTQAVPKRLQSFETKVSTKQKGCDICSKENHPVRLCPRFLQMSVDSRSGYI
FT                   KKKQLCLNCFARGHQLRDCTSMHSCFTCKGRHHTLLHRSPPNSENASSSTSPPTQQLPR
FT                   PSSRNASASTSAVQNFFASGTSAVLLSTAMIDVCHLGTNYRARALIDSGSEATFISERL
FT                   FNLIKLPFRNTRTQVSGLNHSVSAKSSKLCHFGIRSPTKPGLQLDTEAYVLPELSGKLP
FT                   SYPIPRNSLKDLPALRWADPTFFESSQIDVLIGADILPSIMMDGTRQNICGSLLGQETI
FT                   FGWVLTGPISKGKPKRVASFTTQVHQTGDPDSLDTLLSKFWEVEDLPVKMVKESDSYCE
FT                   RNFLQTTTKDASGRYVVTLPFRDPENTGSDLGYSRSIALAQFLRNENRLKRDFPLKEQY
FT                   DSVIQEYLDLGHMKEVPPTHNSPSYHLPHHAVVKPESTTTKLRVVFNASSPSANGISLN
FT                   DILHAGPVLQSDLTIQVLKWRYFQYVFSADITKMYRQIWVDPKHTPFQRILFRNKEGDI
FT                   RDFELKTVTFGVNCAPFLAIRVLQQLAEDIQVPFPNASRIIQQHMYVDDVLAGANSVNE
FT                   AQSSIRELQAALSASGFPLRKWTSNNKSVLKDVPAEHLLHSEFLDIDAESTAKTLGIRW
FT                   RAKSDEFYFVPPDIVVEASYTKREVLSQIARLFDPAGWLAPFIIRSKIFMQEIWLQNLG
FT                   WDDKLPTEMSQRWQSFLEEYSDLNQIRVPRWIWYQPEVVIEHHGFCDASQRAYGAAIYI
FT                   RVEMGQKILTRLLTAKTRVAPVKTVSLPRLELCGAVLLTEMVTAILPHMPSASSDIRCW
FT                   TDSTIVLAWLRKPACNWTTFVANRVAKITQATPVDCWAHVRSEQNSADLASRGVSLQEL
FT                   AENHLWWHGPEWLQGPRELWPAQSDTLPVTELEQRAVKVHFVKGPSIDFLERFSKLDKA
FT                   LRVLVYVQRFFKRCRKGSFLPSSRPTSEEIREAERTLTSIAQRRAYGQELQHLTEKRPL
FT                   PVSSPLVTLFPFIDQHGLLRACGRLTASKTLQYDERHPILLPYDCRLSRLIVQFTHQIT
FT                   LHGGSQLIVRLIRTKYWIPKIKNLVKAVVNPCKICTIYKKRLQTQLMGDFPTDRVSFSR
FT                   AFTYTGIDYAGPFEIKNYTGRACLITKGYVCVFVCFSTKAIHLEPTSDLTTEKFLAAFA
FT                   RFVARRGCPQRVHSDNGKTFVGAAALISRDFLQAIKESVTDAYSHQGLVWRFIPPGAPH
FT                   MGGLWEAGVKSFKTLFLKSTSVRKYTFEELATLLAKIEACLNSRPLSPMSEDPSDLLAL
FT                   TPGHFLIGGPLLSTAEPEIKGEAKSIINRWQHLKAQHQQFSARWKEEYLKELHKRSKWQ
FT                   FPTRNLQADDMVVVKEDNLPPNEWRLGRIVSAFPGADERIRVVEIRTSRGTIKRPVHKV
FT                   ILLPMEDKESSVPRD"
XX
CC   Derived from AJ487856 (Rel. 71, Last updated, Version 1).
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 8556 BP; 2217 A; 2323 C; 1897 G; 2119 T; 0 other;
     TGTTCACGCC AGAAGGGCGC AAACAGTTGA GCGGCAGTGT AAGCGGCCAA TGCTTGTACT        60
     CGAAGCTCCT CCACGGCTCG CAAGCACCGC TGCTCGCGCT CTCCTTCTCT TCTCTCGCTC       120
     TCCTCCCTTC CCGCAGGGTA TTCACCACTC CGCGGTCCCG CGGTATTTCT ACTGTTAGTG       180
     TTAAGGTGGT TGTAATTTAC CAGTGCGTGA ATAAAGAACG AAAGGTTGAA GTCCACCCCG       240
     CGCGTTTTTA ATTTCGGGGA AAATTTCAGC AGCCGCCGCA GCAACCACAA CCAAAGGAAT       300
     CTTTCCGCCC ACTCCATTTC ATGGTCCTTC GAGCCGGATG AGCTCTGATC CTGCCAGCGC       360
     TCCTTGCGGA AAATTCAAGA TAAGTACGGC TTTAAATCCT ATTCCGTCCG TGGTCGCCAT       420
     TTTCGTTTTT TCCAACGGCG TTTATTCTTT CCGTCCATCC GTATCAAGTG AAAAGTGAAA       480
     ATATATAAGT ACATGCGCCC AGCCACCGCG ATTACTTTTT TTTTTAAGTG CATAAACAAG       540
     CACTTTGCCA ATACCGGCCC CCTAATTCGT CTAACGGTGC TCCGCTGATA TCCAAGCGCA       600
     TGTACATATA TACATATACA CACTGTCCAA AATTCACTGC TATCGTCCGC TGCTAAACTG       660
     CTGTTTTTTT TTTTGTGCCT CAATAAAATA TACAATACAA TACAATATAC AAATTTAATT       720
     AAATTCAATA AAATATACAA TACAATACAA TGTACAAATT TAATTAAATT CAATTAAATA       780
     TACACATACA TATAATCACC AAAAATTTCA CATACACACA AATATACATA GCCATATACA       840
     TACATTACGA CATATCCATT GTCATCCAAC GATATTCACA TACACACAGT CGCGACGTAC       900
     ACAGACTTGC CAAGTGCAAG TTCTTTCGTC TCCTCTTTGT TCGTTATTGC CCTGACAAAA       960
     AAACCAGCGC ATAGCGACGA GAGAATACCC TATTGTCGAG ACATAAAACA AAATAAATAA      1020
     GTCCGACGAT AAAATTTAAA AATAAATTTT AAAATATTTT ATTTATTTAT TTTTATTATT      1080
     TAATAAATAA TTTAATAAAA AAAAGGGAGA GAAACGATTG TTTTAATTAT TATTATTCTT      1140
     GATTATTAGT TAATAATTAT TTAACCCAAA TAATAATTTT TTTTTTTTTT ACAAGCTATT      1200
     TCTGGCTCCC ATTTCTGGTT CCTAAATTAC AATAATAAAA TTGTGGTCCT AAATCCGGTA      1260
     GCTATTTTTA TAAATTTAAA CTTGAATTTT CTAGCTATTT TCCATATATT AGCTATTGTT      1320
     TTTCGGGATT TCCAGTCGAT AGCGATTTTT TTTATAAATC CTTGGCTATT TTCCAGACTC      1380
     CAGCCGGTAG CTATTTTTTT TGCTTTTCGG GATTTTTCAG TCGGTAGCGA TTTTTTATAA      1440
     ATCCTTGGCT ATTATCCAGA CTCCAGCTGG TAGCTATTTT TTTTTTTTTT TTTTAGCTAT      1500
     TTTTTCAGAA ATTGCAATAA ACTGAATTTT AGCTATATTG TGCTTCAATC TCCAGATCCC      1560
     AATTGCAACC TTCTCAATTT AAGTTTTTTT TCCAGTTGAT TTAAGATCTA TTGGGGCCTT      1620
     ATTTCACAAA AATTGAGATT TTTTTTTTTT TTTTTTCCTT CGTGCTCCAA TCTCCTTCTT      1680
     GACTTCCTTC TCCTAGGGCA TAGCTGAGCA TGCCCCTAGA GGGAGACAAG AAAAAGACAC      1740
     CCGCACCTGG AAAAGAACAA AAGTTCAACC CGCAATCTCC GATATCCACT CGCGGTAGGC      1800
     CAGCACCCAA GTCCGTTAGT CCCAGGGTCA AAACCGCGAC TCCCACTCCG AAACCAAAGG      1860
     TTTTGCCATC GACCAGTTCG AAGACAACTC CTAGGTTGGT CATTTCCCGA CCAGTGACGC      1920
     GAGCGTCTAG TGAGTCTTCT CTATCGAGAA AATCCGAGAG TCCCTCCGCT GTCGGGACCG      1980
     ATTTCCTTCG CGTCACACGC TCTACCACAA AGAGAATGGC ATCCTCTGAA CAGCCGACGC      2040
     CCGCAAACGC AGCGTTGCAT AAATTCATCG CCGTCAGCGA TCGCGTAAGC CTTTTCGAAG      2100
     CGAAGATCAA CACTCCAGAT CAAGCCTCTC CGTCCCTACA CACGTTACAA GTCCGTCTGC      2160
     AACAGGTGCG AGCCTTATGG GACAAAGTGG AAAGAGAGTA CGAAACATGC TCTGACCTAA      2220
     TGGCCCAAGA AGGATCCCTA GACACAGTGC CTATTCTCCA GGCCAAATAT GACTACTGCT      2280
     ACTCAGTATA CGAGTCATGT GCAGCACAAA TTGGCGAAAC AATCGACAGA GCAACGCCTC      2340
     AAGTCGCGCA AGCACCCTCT CAGCCGCTAA TTTCGTCCGG CTGCCGCTTA CCTCCATGCG      2400
     ACACGGAAGT CTTCGATGGC GACTACCTCC GATGGCCCAC TTTCCGGGAC CTATTCACGG      2460
     CAATTTACGT AAACAACCCC AGGCTGACTC CGGTCGAGAA GCTATTCCAC CTCCTTACCA      2520
     AAACAAGTGG CGAAGCAAAA GCCATCGTGG CGAAATCTCC TCTCACGAAT GATGGTTTTG      2580
     CTTCGGCTTG GGAGGCGCTT CGAGATCGGT TCCAAAATAA GCGACTTTTA GTCAACAGCC      2640
     AGCTCAAGCT TCTTTTTAAC TTGAGCTCAA TTTCGCAAGA ATCTGGTCAT GCTCTAAAAG      2700
     AGCTACAATC CACGATTCAG GGGTGTTTAA CGGCACTAGA GCATTCCCAG GTATCCACAG      2760
     AAAACTGGGA TTGTATCTTG GTTTTCCTTT GCGCGAGCAA ACTGCCAAAG CAGACCCTGT      2820
     CCTTATGGGA ACAGTCGCTA ACTGCCAAAT CCGAGATCCC AGCTTGGGAA GAAATGAATG      2880
     CCTTCCTGAG CGAAAGGTAT CGGACATTGG AAGCCATCGA AGATATGAAA CCGACTCAGG      2940
     CGGTTCCCAA AAGGCTTCAA TCCTTCGAGA CAAAGGTCAG CACCAAACAG AAAGGGTGTG      3000
     ACATATGTTC TAAGGAGAAC CATCCGGTAC GATTGTGCCC GCGTTTTCTT CAAATGTCTG      3060
     TTGACTCGCG CTCCGGATAT ATAAAAAAGA AGCAGCTATG TCTGAATTGT TTTGCCAGAG      3120
     GTCATCAGCT ACGTGACTGC ACAAGCATGC ACAGCTGCTT TACATGTAAA GGCAGGCACC      3180
     ATACGCTGCT GCATCGCAGC CCCCCAAATT CCGAAAATGC GAGTTCCTCA ACCTCGCCCC      3240
     CTACACAGCA ACTTCCGAGA CCCTCTAGCA GAAATGCATC GGCAAGCACC TCAGCGGTGC      3300
     AAAATTTCTT CGCGTCCGGC ACTTCAGCCG TCCTACTGAG CACAGCGATG ATAGACGTGT      3360
     GCCATTTGGG GACGAACTAC CGAGCCCGAG CCTTAATCGA CTCGGGATCC GAGGCGACGT      3420
     TCATTTCAGA ACGCCTGTTC AACCTTATCA AGTTGCCATT CCGCAACACC CGGACCCAAG      3480
     TCTCCGGGTT AAATCATTCG GTCTCCGCGA AATCCTCGAA GCTGTGTCAC TTCGGGATTC      3540
     GCTCTCCGAC TAAGCCAGGT CTACAGTTAG ACACTGAAGC GTACGTCCTT CCGGAGCTCT      3600
     CAGGCAAACT GCCCTCCTAT CCGATCCCTC GGAATTCTTT GAAGGACCTG CCCGCACTCC      3660
     GCTGGGCAGA TCCTACCTTT TTTGAGAGCT CTCAAATTGA TGTACTGATC GGGGCTGACA      3720
     TTCTACCATC CATAATGATG GATGGCACCC GACAAAATAT TTGCGGCTCG CTCCTGGGCC      3780
     AAGAAACTAT TTTCGGGTGG GTGCTAACGG GGCCGATTTC CAAGGGTAAG CCGAAACGGG      3840
     TCGCATCCTT CACGACCCAG GTGCACCAAA CAGGCGACCC TGATTCGCTC GACACGCTTC      3900
     TCAGCAAGTT CTGGGAGGTG GAGGATCTAC CAGTAAAGAT GGTAAAAGAG TCGGACTCCT      3960
     ATTGTGAAAG GAACTTCCTC CAAACGACCA CAAAAGACGC AAGCGGGAGG TACGTGGTGA      4020
     CGCTCCCGTT CCGGGATCCC GAGAATACCG GATCCGATTT AGGATATTCA AGGTCCATTG      4080
     CGCTAGCTCA GTTTCTTAGA AACGAAAATC GTTTAAAAAG AGACTTTCCA TTAAAAGAGC      4140
     AATATGACAG CGTGATCCAG GAGTACCTGG ATCTGGGGCA TATGAAAGAA GTTCCGCCGA      4200
     CTCACAATTC TCCCTCGTAT CATCTTCCTC ATCACGCGGT AGTTAAGCCC GAAAGCACCA      4260
     CTACAAAGCT TCGCGTTGTA TTCAACGCTT CAAGTCCGTC GGCAAATGGG ATCAGCTTAA      4320
     ATGATATTCT TCATGCTGGT CCAGTCCTAC AATCCGATCT AACGATCCAG GTCCTGAAAT      4380
     GGCGTTATTT TCAATACGTC TTCAGTGCAG ACATTACGAA AATGTATCGT CAGATCTGGG      4440
     TCGATCCAAA ACACACCCCG TTTCAAAGAA TTCTGTTCCG AAACAAGGAA GGAGATATCC      4500
     GAGACTTCGA ATTAAAAACA GTTACCTTCG GGGTCAACTG CGCCCCCTTC CTCGCCATTC      4560
     GAGTCTTGCA ACAGCTGGCA GAGGATATCC AAGTGCCATT TCCAAATGCC AGCCGCATCA      4620
     TCCAGCAGCA CATGTACGTC GACGACGTTC TGGCAGGGGC GAATTCCGTA AACGAAGCCC      4680
     AAAGTTCAAT TCGAGAGTTG CAAGCAGCCC TAAGTGCCTC CGGGTTTCCG CTAAGAAAGT      4740
     GGACCTCAAA CAACAAAAGC GTCCTTAAAG ACGTCCCGGC CGAACACCTC CTTCATAGCG      4800
     AGTTCCTCGA CATCGATGCC GAAAGCACGG CCAAGACGCT CGGTATACGG TGGAGGGCAA      4860
     AGTCCGACGA ATTCTATTTC GTTCCTCCAG ACATAGTTGT GGAGGCCTCC TATACAAAGC      4920
     GAGAAGTTTT GTCCCAAATC GCTAGGTTGT TCGATCCTGC CGGGTGGCTC GCGCCGTTCA      4980
     TAATCCGGTC AAAAATATTC ATGCAGGAGA TTTGGTTGCA AAACTTAGGC TGGGACGATA      5040
     AGCTTCCCAC TGAAATGAGT CAGCGGTGGC AATCGTTTTT AGAGGAGTAT TCCGACCTCA      5100
     ACCAGATCCG GGTTCCGAGA TGGATCTGGT ACCAGCCTGA GGTAGTCATA GAGCACCACG      5160
     GTTTCTGTGA CGCGTCTCAG AGAGCCTATG GAGCGGCTAT ATACATCCGC GTCGAGATGG      5220
     GGCAAAAGAT CCTGACTCGC CTGCTTACAG CCAAAACACG AGTAGCCCCA GTCAAAACCG      5280
     TCTCCCTTCC TCGGCTAGAG CTCTGTGGTG CCGTGCTGTT AACCGAAATG GTGACAGCAA      5340
     TCCTTCCGCA CATGCCCTCC GCCAGTTCAG ATATCCGCTG CTGGACAGAT TCCACAATCG      5400
     TCTTAGCCTG GCTACGAAAG CCTGCGTGCA ACTGGACCAC ATTTGTGGCC AACAGAGTTG      5460
     CCAAGATCAC GCAGGCGACG CCAGTCGACT GTTGGGCGCA CGTTCGCTCA GAACAAAACT      5520
     CCGCCGATCT AGCCAGTCGA GGCGTATCCC TTCAGGAATT GGCAGAAAAC CATCTCTGGT      5580
     GGCATGGACC AGAGTGGCTG CAAGGGCCAC GAGAGCTATG GCCAGCACAA AGCGACACTC      5640
     TTCCAGTGAC AGAGCTAGAG CAGCGCGCGG TCAAAGTGCA TTTTGTCAAG GGCCCGTCCA      5700
     TCGACTTTCT CGAACGTTTC TCCAAATTGG ACAAGGCCCT GCGAGTTCTG GTCTATGTTC      5760
     AACGCTTCTT TAAACGCTGC CGCAAAGGTT CGTTCTTGCC CAGTTCACGA CCTACGAGTG      5820
     AAGAGATCCG AGAGGCAGAA CGAACTCTGA CCTCCATTGC GCAGCGCAGA GCATATGGCC      5880
     AAGAGCTTCA GCATTTGACC GAGAAAAGGC CTCTTCCAGT GTCAAGTCCT TTGGTGACTT      5940
     TGTTCCCGTT CATTGACCAA CACGGCCTTT TAAGAGCGTG CGGCCGTCTC ACTGCATCCA      6000
     AAACCCTGCA ATATGATGAA CGTCATCCGA TTCTTCTCCC CTATGACTGT AGACTGTCGC      6060
     GCCTCATCGT CCAATTTACT CACCAGATTA CTCTTCATGG CGGTAGTCAA TTGATCGTAC      6120
     GCCTGATCCG AACCAAGTAT TGGATTCCTA AAATCAAGAA TCTGGTGAAG GCTGTGGTCA      6180
     ATCCGTGTAA GATTTGCACG ATTTACAAGA AGAGACTCCA AACACAGTTG ATGGGCGACT      6240
     TCCCGACAGA TAGAGTCTCC TTCTCGAGGG CGTTCACCTA CACGGGTATC GACTATGCCG      6300
     GCCCTTTCGA AATAAAAAAT TATACAGGGA GAGCGTGTCT CATAACGAAG GGATATGTCT      6360
     GTGTGTTTGT GTGCTTTTCC ACGAAGGCTA TCCATTTGGA ACCCACTTCC GATCTAACAA      6420
     CCGAGAAATT TCTAGCGGCC TTTGCTCGTT TCGTAGCGAG GCGCGGTTGT CCTCAGCGGG      6480
     TCCATTCGGA TAATGGTAAA ACCTTTGTGG GGGCGGCAGC TTTGATTTCC AGGGACTTTC      6540
     TCCAAGCCAT CAAAGAGTCC GTGACTGATG CATATAGCCA CCAGGGACTC GTATGGCGGT      6600
     TCATCCCACC AGGGGCTCCA CATATGGGGG GTTTGTGGGA AGCAGGGGTG AAAAGCTTCA      6660
     AAACCCTGTT CCTTAAATCG ACGTCAGTCC GCAAATATAC ATTTGAGGAG CTGGCGACGC      6720
     TTCTCGCTAA GATTGAGGCT TGCCTCAACT CTAGACCCCT CTCCCCTATG TCCGAAGATC      6780
     CCTCAGATTT GCTGGCCCTC ACACCAGGCC ATTTCCTTAT TGGAGGGCCG TTGCTTTCCA      6840
     CGGCGGAACC CGAGATAAAG GGCGAAGCCA AGTCGATAAT AAATCGATGG CAACACCTCA      6900
     AGGCACAACA TCAGCAGTTT AGTGCACGGT GGAAAGAGGA GTATCTTAAG GAACTCCATA      6960
     AACGAAGCAA ATGGCAATTT CCGACCAGGA ATCTCCAAGC CGACGATATG GTAGTTGTCA      7020
     AAGAGGACAA TCTACCACCG AACGAATGGC GGCTCGGCAG AATCGTTTCT GCCTTCCCAG      7080
     GAGCCGACGA GCGCATTCGA GTCGTCGAGA TCCGTACGTC TCGCGGCACC ATAAAACGCC      7140
     CTGTCCACAA AGTTATTCTG CTACCGATGG AGGACAAAGA GTCCTCCGTT CCTAGGGATT      7200
     AGGGCACTTC CCCCATTCCG GGGCCAAAAT AGTAGTCGGC TCATACTAAG CTTCTTCATT      7260
     TCTTTTATTG GCAGACTTAC TCACTCCTCC AATAATGGCT CCTCGTCCTC GTGCCACCCA      7320
     GTCGTTGGAG AGCAGACGTA CTCGAGGTAT TAAATCCTAC CGCTGCCGAG TCTGCTCTGG      7380
     AATCCATCCT CTTCGAAAGT GCACGAGGTT CCACAAACTG AGCGTTGAAA AGCGCCTTCG      7440
     GGCAGTACTT ATTAATAAGT ACTGCTCGAA CTGCCTCGCC CATCAGCACT CAGGAGGAGA      7500
     CTGTCGCAGC CAAGAGGGAT GCAAGAAGTG TGGAGGAGAC CACCACACCC TACTCCACAT      7560
     GCACGAGGTC CTCCCCGCTC CGAACCCGGC AGCGCTACCA GCTCCGACGC GCAGAGAGCG      7620
     CCATCCCGCT GCACCTCGTC CGGTCCGGAT TTCCCGCACT CCGCCACCAG CCCCAGTCGC      7680
     CAACAATCGC CCGCGTCAGC AGCAGCAGAA GGCTGTCCCC ATACTGCCTA CAGCCATCGT      7740
     CGTGCTGGAC ACGGGCTCGA AGACCTTCGA GACCGGGGCC ATGATCGACC CATGCATGCC      7800
     GGTGAGCAGC ATCGACCGGT CGTTAGCGGC TGCGTTCCGG CTGCCCATCA CTCGGCTGGG      7860
     AGGCAACGAG ATCTGCTCGG TGACACTCCG GTCCCGAACC AGCACCTTCC GACTCAACGT      7920
     CGTCCTGAAG ATCGATCCCA TCCTAAGGAT CCGGACACCC ATCCGAGCTC TGAGCGACGC      7980
     CGCCAGGGCC AAGTTTGACG GTGTTCGTCT CGCGGACGAG CGCTTCCACC GGCCGGCCTC      8040
     CATCTCCCTC GTGTTGGGAT CAGATGTATA TGCCAATTTG ATCCAACCGG GGTTCCTAAA      8100
     AATTGAGGAT GGGTTGCCCG TCGCGCAGAA CACGGTGTTC GGATGGACCG TTTCTGGAAC      8160
     GTGCGCGAAA TGAAGAGGAC GATCCTGATA TCTAGCCGGC CAGGGATACC TTTGCCTACG      8220
     CAAGGGGGGG GAGAATGTTC ACGCCAGAAG GGCGCAAACA GTTGAGCGGC AGTGTAAGCG      8280
     GCCAATGCTT GTACTCGAAG CTCCTCCACG GCTCGCAAGC ACCGCTGCTC GCGCTCTCCT      8340
     TCTCTTCTCT CGCTCTCCTC CCTTCCCGCA AGGTATTCAC CACTCCGCGG TCCCGCGGTA      8400
     TTTCTACTGT TAGTGTTAAG GTAGTTGTAA TTTACCAGTG CGTGAATAAA GAACGAAAGG      8460
     TTGAAGTCCA CCCCGCGCGT TTTTAATTTC GGGGAAAATT TCAGCAGCCG CCGCAGCAAC      8520
     CACAACCAAA GGAATCTTTC CGCCCACTCC ATTTCA                                8556
//
ID   BS3   standard; DNA; INV; 1790 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0067624; BS3.
XX
FT   source          nnnnnnnn:1..1790
FT   SO_feature      CDS ; SO:0000316:<2..1618
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:; BS3\RT"
FT                   /protein_id=""
FT                   /translation="IKRRCARKAPLADNSGAWCRTFIEQAEVFAVHLAERFQPLNLASP
FT                   QDVDATHDQLSQALQMDLPMQPITPSEIADVIAKQNPKKAPGHDTTCNSTLRTLPRCAI
FT                   LYITLLFNAMVRLQYFPPQWKLGIISMIHKPGKPEKNPGSYRPISLLPSISKVFERLIA
FT                   ARMVRIMEAKGILPEHQFGFRAGHCTVEQLHRVVEQILSAFENKEYCNALFLDVREAFD
FT                   RVWHSGILLKIKNTLPAPYFGLLRSYLEKRRFAVRFHSALSNEHNVAAGVPQGSVLGPL
FT                   LYCLYSYDMPRPDVSLPGTSMLATFADDVCVTYRSCCEHDAADDIQDFASTFAEWAKRW
FT                   NIGINGDKSANVCYTLKRKTPPAVLIDGTPVPQSNSAKYLGVILDRRLNFSKQVSAMRV
FT                   RIRAAASKHFWLINSRSKLSLSNKVTIYKQIIAPIWRYGCQIWGLACDSQIRRIQAAQN
FT                   KIARMITGCEWYVRNTTLHKDLKLATVFEAINMHSSRYHDRLERHRNRLAKALSRARPP
FT                   RRLHRRQPKDLIIRSPLTRARR"
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 1790 BP; 483 A; 460 C; 435 G; 411 T; 1 other;
     tatcaaaagg cgatgtgcgc ggaaagcgcc attggccgat aacagtggkg catggtgccg        60
     gacttttata gagcaagccg aagtgtttgc tgttcacctc gcggagcgat tccagccttt       120
     gaacctcgcc agtccccagg atgttgacgc gactcacgac cagctgtccc aagcgctcca       180
     aatggacttg ccgatgcaac cgatcactcc cagcgagatt gctgacgtca tcgccaaaca       240
     aaaccccaaa aaagctccag ggcatgatac tacctgcaac tccaccctaa ggacactacc       300
     gagatgtgcg atcctctaca ttacgttgtt attcaacgct atggtgaggc tgcaatactt       360
     ccctccacag tggaagctcg gtattatctc catgattcac aaacctggaa agcctgaaaa       420
     gaaccctggg tcctaccggc caatcagtct cctcccttcg atctcgaagg tgtttgagag       480
     actgattgct gcccggatgg tcaggattat ggaagcgaag ggtatcctgc ccgagcatca       540
     gtttggtttt cgtgctggac actgtacggt agaacaacta caccgagtgg tcgagcaaat       600
     cctatcggct ttcgaaaaca aggagtactg caatgcactt ttcctggatg tacgtgaggc       660
     gttcgatcgg gtgtggcact ccggtatcct gctcaaaatt aagaatacgc tgcctgcacc       720
     atacttcggc ctcctgaggt cgtatctcga aaagagaaga tttgcggtac gattccactc       780
     ggctctgtca aatgagcata atgtggcagc cggagtacca cagggaagtg tacttggtcc       840
     gctgctttac tgcctgtaca gctacgacat gccacggcca gacgttagcc tacccgggac       900
     gtcaatgttg gccacatttg ctgatgacgt gtgtgtcacc tacaggtcct gctgcgaaca       960
     cgatgctgct gacgacatcc aggacttcgc atcaacattt gcggaatggg caaaacgttg      1020
     gaacattggc atcaatggtg acaaatcagc gaatgtgtgc tacacgctga aaaggaaaac      1080
     accaccggct gtgctcatcg atggcacccc tgtcccccag tccaattcag ccaaatatct      1140
     tggtgtaatc ttggatcgga gactaaactt ctcgaagcaa gtgagtgcga tgagagtgcg      1200
     tatacgtgca gcagcgtcaa agcacttctg gctaattaat tcgcgaagta aattgtcact      1260
     ctccaacaag gtgacaattt acaagcaaat tatagcgcca atatggaggt atggttgtca      1320
     gatttggggc ttggcttgcg acagccaaat tcgtcgcatt caggctgccc aaaacaaaat      1380
     cgccaggatg attaccggct gcgaatggta cgtaaggaac acaaccctgc acaaagacct      1440
     caagctagcc actgtctttg aggcaataaa catgcactcc agccggtacc acgacaggct      1500
     agagcgccac agaaatcgcc tagccaaggc actgtccaga gctcgcccac caagaaggct      1560
     ccacaggaga cagccgaagg acctcatcat acggtccccc ttgacgagag ccaggagatg      1620
     atgatgatct cataattgtt atattgttaa ttgttatatt tgtattattg ttttgttaca      1680
     gctaactttt gttagccggc gcgcctgaaa gggctgaatt aatagcgacc aaggtgacaa      1740
     aggggttttc agctaccccg tatgccttaa taaagtataa aaaaaaaaaa                 1790
//
ID   BS4   standard; DNA; INV; 754 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0067624; BS4.
XX
FT   source          nnnnnnnn:1..754
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 754 BP; 240 A; 165 C; 154 G; 195 T; 0 other;
     tcatatctgg atggacggaa gcttatggtc aggtacacgg atacctactc cgctccctgc        60
     caaatgttag ctggagttcc gcagggcagc gtccttggcc cgctgctcta ttctttatat       120
     actgctgacc tacctagacc tacctacgag aatgcgcaat acccctctaa ggctatcatt       180
     gcgacttacg ccgatgatat tgcggttctt tacagatcca aatgccgtat tgaagctgca       240
     aatgggttgc aaggatacct tcaaacttta tcggcgtgga gtagaaggtg gaacatgaag       300
     gtcaatcctt taaaaacatt caatccatgt ttcacactta aaaggcttgc tacaccagca       360
     atacaatttg aaggtgtgac attggaacag ccatctcaag cgaaatacct cggcataacc       420
     ttagataagc gccttacttt tgggccacac ataaaaacaa taaccaaacg atgtggccaa       480
     agaatgcagc acctaagatg gctgataaat aaaaggagca caatgtcgct aagagccaaa       540
     agagcagtat acgtggattg tatagcccca actgacttaa aagactggga ttcagcaaga       600
     cgattcgtta atcgtccagc cctcccaaaa cctgctagta atcctcgtga gaggtttggt       660
     tcattaagat ttgtttttat atgtgttgtt aagatgctaa tcagaatgca tggtttcaac       720
     gcttaataaa ataatatatt aaaaaaaaaa aaaa                                   754
//
ID   DOC4   standard; DNA; INV; 2791 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0069587; Doc4-element.
XX
FT   source          nnnnnnnn:1..2791
XX
FT   SO_feature      CDS ; SO:0000316:<1..1743
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:; Doc4-element\ORF2"
FT                   /protein_id=""
FT                   /translation="IQNEIREQRQREQDERRLSSIKNNAYFSFVSTETLKPSQDQRAHS
FT                   CSPSLPSTVPKSWSEECASPMPQPTTNYTQTPLTIVAKPPLLSLAAVTTSTVASLTTAI
FT                   ASTTTLTATVSSTQTIQSTTSRAFALQAKQLTATITDLRESKSNPSGRPNSVMQTGMDR
FT                   YVFVKRKRSPQRTTGNRAKINCGSETKTTTTNNKNMFALLAENASEEANKTTDSVSQKP
FT                   KPPPIYIQEITTNALANKIVQLIANNNFHVIPLRRGKIQETKLQVKTEDQFHAVSKFLN
FT                   ENGKKYYTYQLKSSKGLQVVLKGIEPDVTPNEVANALHEKGFNVKSVINILNKDKKPQP
FT                   LFKVELDPTSQTLKRNEVHPIYNLQFLLHRKITVEEPHKRNGPVQCSNCQEYGHTKTYC
FT                   TLPSVCVACGDLHESGTCPANKLDPNSKKCGNCGENHTANYRGCPVYKDLKSRMNKRIA
FT                   SARSTNNTQKIWYPKNVWYPPNRFLTFSSPTPNCHPLPPVSTIPGVSFASALKSGTEGP
FT                   ASTTEFSKAPQPRAVPDDLQQPTSAIEKIMLSFQATMTEFMSFMRTTMQDLTCALVQVL
FT                   ASQHSK"
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 2791 BP; 909 A; 697 C; 517 G; 661 T; 7 other;
     caaaacgaaa ttcgtgagca acgtcaacgt gaacaagacg agcgtcggct ctcttcaatc        60
     aaaaacaacg cgtatttctc gttcgtttct acggaaacgc tcaagccctc ccaagaccag       120
     agagcgcact cttgctctcc gtcgttgcca agcacagttc caaaatcttg gagcgaagag       180
     tgcgcttccc caatgccgca accaacaaca aattacacac aaactccgtt aaccattgta       240
     gccaagcctc ctctcttaag cctagctgca gtaactacca gcacggttgc ctctctcaca       300
     actgcaatcg catcgacaac aacattaacc gcaacagtct cttcaactca aacgattcag       360
     tcaacgacct cacgggcttt tgcattgcaa gcaaaacaat taacagctac aattaccgat       420
     ttacgtgagt caaagagcaa tccaagtggc cgcccgaatt cggtcatgca gactggtatg       480
     gatcgctacg tttttgtaaa acgtaaacgg agtccgcaac gcacaacagg taatagagcc       540
     aaaataaatt gtggtagcga aacaaaaact actactacca acaataaaaa catgtttgca       600
     ctgctagcag aaaacgcaag cgaggaagct aataaaacga cagatagtgt atctcaaaaa       660
     ccaaagcctc caccaatata catccaagag attactacga acgcactagc aaataaaata       720
     gttcagctta tcgcaaacaa caattttcac gttatacctc taagaagagg aaaaattcaa       780
     gaaactaagc ttcaggttaa aaccgaagac cagtttcatg cggtttcgaa gtttttaaac       840
     gaaaacggca aaaaatatta cacgtaccaa ctcaaaagca gtaaagggct gcaagtggta       900
     ctaaaaggca ttgagcctga tgtcacaccc aatgaagttg cgaatgcact tcacgaaaag       960
     ggctttaacg ttaaatcagt tattaatatt cttaataaag ataagaagcc ccaaccgctc      1020
     ttcaaggtcg agctagaccc aactagccaa acactaaaga gaaatgaagt gcacccaatt      1080
     tacaatctcc aattcttatt acaccgtaaa attactgtag aagaaccaca taagcgtaat      1140
     ggtccagtac aatgctccaa ctgccaagaa tatggccaca ccaagacata ttgtaccctt      1200
     ccttccgttt gcgtcgcctg cggggatctg cacgaatctg gcacttgccc ggctaataaa      1260
     cttgatccaa attcaaaaaa atgtggaaat tgtggtgaaa accacacagc taattaccgg      1320
     ggatgccctg tctacaaaga tcttaaaagt cgcatgaaca aacgaattgc ttcggctcgt      1380
     agtactaata atacccaaaa aatatggtac cccaaaaatg tatggtaccc tcccaatcgt      1440
     ttcctgacat tttcttctcc aacgccaaat tgtcatcctc ttcctccagt aagcaccata      1500
     ccgggtgttt catttgctag tgccctaaaa tcgggaacgg aaggtcctgc gtccacaaca      1560
     gagttctcaa aagcgccgca acctcgagcc gtgccagacg acctgcaaca acccacaagt      1620
     gccatcgaaa aaattatgtt atcattccaa gcaacgatga cggaatttat gtcgttcatg      1680
     agaacaacaa tgcaggatct tacgtgtgcc ttagtacaag tacttgcatc tcaacattca      1740
     aaataaaaaa atgtcctccc ttcgtatatg tttgtggaat gcgaatggcg tctcccgcca      1800
     caaacttgat ctcgctaggt tcttgaaaga taaagaagtt gatattatgt tgctctcaga      1860
     gacccatcta accagcagtc gcattaaaca taacttcctt gatcgttttg agaaaaacta      1920
     cctacaagct acatctgtgg tggtcyattc tagtggcggt aatataactc tggccgccgt      1980
     ctactgtccg ccccgtttct caattactga gaatcaattt atggaattct tttgctttcc      2040
     tttagagctt cttaacgmtg tacaahdtga adacttctca ctgtaaggtg caatgcgaat      2100
     acctccgagg acatgcgaag gggagtccct cagggtagcg ttyttggtcc gacactgtat      2160
     ctcctataca cagctgacat ccctacaagt gatcgaacaa cactatcaac ttttgctgat      2220
     gacaccgcaa ttctcagccg atcgaaatgc cctctgcaag catcagcgca cctggctggt      2280
     cacctaactg ttgtggagaa ttggctggct aactggcgta ttgcaatcaa cgagcagaaa      2340
     tgcaaacatg tcacatttac gcttaatagg cgtagctgtc ccccattaac tctaaataac      2400
     gtccaaattc cacgaagtga ttcagccatt tacctcggag ttcatctaga cagaagatta      2460
     acttggcgta agcacattga agccaagaaa acgcatttga agctgaaagc cagtaggttt      2520
     cactggctta tcaactyacg ctctccacta agtttggact acaaggtgct gttatacaac      2580
     acagttctaa aaccaatatg gacatatgga tgtcaactat ggggcaatgc atgcaacagc      2640
     aacattgaaa taatacaacg agcacaatca aaaatcctgc gaacaataac tggtgcgcct      2700
     tggtacatcc ggaacgcgaa catccaccag gacctacgga ttccagttgt aaaaactgaa      2760
     attgtccagc agaaggctaa atacctaaag c                                     2791
//
ID   DOC5   standard; DNA; INV; 4682 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0015786; Porto1.
XX
SY   synonym: Doc5-element
XX
FT   source          nnnnnnnn:1..4682
FT   SO_feature      CDS ; SO:0000316:211..1947
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:; Porto1\ORF"
FT                   /protein_id=""
FT                   /translation="MSASDAQNQKRELQAKQNKNNSYLSFTHISNYTNNYQSLHPQSDG
FT                   RARSCSPALERPNNYSQHRSAECAPNSSARTPTTTSAIPINTHSTLPLTAVTLSALPLW
FT                   TLPLSATSETNTTTVATIATTTTVFYVSMPICSSSANIKTPSSIPASTKINKTQSSLPN
FT                   QQNLKLYRDNQSPNSSKDLLNNNKKQRNKAQTATQKTLKKYWLAEPHSSNRFELLAQDD
FT                   EDENQTDNGTNATINTQMQIEHKSAKPPPIYVQNVENIYALTTALNSLEETRYELKALS
FT                   SNEIKIQPLETTHYHNILRLLKDKSTKYYTFRPKDQRGFKVILRNVHHATDKDDIINEL
FT                   AQQGHEVINLHNIQRYDSKQPLPLFSIELKMKDNNKDIYKIEHLLHCKVIFEPPRPKRT
FT                   LPQCTNCQKYGHTKNYCTKDPTCVKCAGKHSSSSCTINTRSDRTSIKCALCSENHTANY
FT                   KGCMVYKALQIQKYPTLRKKEIPVTETTHQTTQHSTTNNVVSLKTPALSYAEVLNKNQV
FT                   TSHQTNSTPQPTIVPDIQPASTQLSQTAQNDFDELKQMMKQLIAQMTNMMNIFTLLLFK
FT                   LDK"
FT   SO_feature      CDS ; SO:0000316:?..?
FT   SO_feature      start_codon ; SO:0000318:?..?
FT                   /db_xref="FLYBASE:; Porto1\ORF"
FT                   /protein_id=""
FT                   /translation="NRLQYYLSKLETTLSTNYSLWKATKKFTNSTIHKPPIKRNNNTWA
FT                   RSNKEKADTIYNDNAELPRQITNLNCAIKTITKAEIKSHIKQIKNKKAPGYDLIGGKIL
FT                   KELPDAIITYIRNLFNGILRLQYFPITWKVGQIKAIPKPNKNANTVSSYRPISLLPVLS
FT                   KVFEKVLFEKLLFNRIEPILKQKNIIPPHQFGFRKQHSTVQQVHRVINKITDDFDKKKF
FT                   CYAVYLDIAKAFDKVWHKGLLHKLRNILPYNLYTILQSYITDRYFYIKYDNECSDIMPV
FT                   SAGVPQGSVLGPILYLIYTSDIPAPTTPGSMIATFADDTVLMSSSACEKTAASTLQQIM
FT                   TQTVSWFERWGIEINKDKTQQVIYTKRQPKNFAIKINDNQILLHPYAKYLGLTIDSKLT
FT                   WKQHILNKRNEIKNKFRQLNWLIGKHSKLELHNKIAIYKAIIKPIWTYGIELWGTASKS
FT                   HLQLIQRTQSKMLRIITKAEWYIRNEDIHNDLNIETVNETIKKKQQKTHKSTT"
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 4682 BP; 1899 A; 1057 C; 676 G; 1050 T; 0 other;
     catctgaact tcaaccccga cggacgtgtt tttaacagag gtccagttaa tatcgaagtt        60
     taagtgcaaa attcaagccc aagtgcaacc atcatataaa agcgaaaaga cgctaacaca       120
     tatttatatg tgttaaaaac cttatgtctc tctgtgaaca agataaacaa aaaaaaaaaa       180
     acaagtgaaa acaataaaca aaacaaaaat atgagcgcat ccgacgctca aaatcagaag       240
     cgagagcttc aagctaaaca aaacaaaaac aactcctacc tctcattcac ccacatatca       300
     aactacacaa acaattatca aagcttacac cctcaaagtg atggaagagc gcgatcttgc       360
     tctccagcat tggagagacc caacaattac tctcagcaca ggagcgcaga atgcgcgcca       420
     aattcatctg cacgtacacc aacaacaact tccgctatac caataaacac acactcaact       480
     ctcccgctca cagcagttac gctctcagct ctcccactct ggactcttcc gctctcagca       540
     acttcagaaa ccaacaccac aactgtagca actatagcaa caacaactac agttttctat       600
     gtttcaatgc cgatttgctc ttcttcagcg aatattaaaa cgcccagctc aatacccgcc       660
     tcaacaaaaa taaacaaaac tcaatcctct ctcccaaacc aacaaaactt aaaactttac       720
     cgagacaatc agtctccaaa cagttccaaa gatctcttaa ataacaacaa gaaacagagg       780
     aataaagctc aaaccgctac ccaaaaaaca ctcaaaaagt actggctagc cgagccacac       840
     tcaagcaacc gttttgagct attagcacaa gatgatgaag acgaaaacca aactgacaat       900
     gggacaaatg caactataaa tacgcaaatg caaattgaac acaaaagtgc aaaaccgccc       960
     cctatatatg ttcaaaatgt tgaaaacata tacgcactaa ctactgcttt aaattcattg      1020
     gaagaaacac gatatgaact aaaagcacta tcaagtaatg aaataaaaat acagccacta      1080
     gaaactactc actatcacaa catattaaga ctattaaaag ataaatcgac caaatactac      1140
     accttcagac caaaagacca gagagggttt aaggtaattc ttcgtaacgt ccatcatgct      1200
     acagacaaag acgatattat caatgaacta gctcagcaag ggcatgaagt tataaattta      1260
     cacaacatcc agcgctacga ctccaaacaa ccattgcctc tattctctat tgaactcaaa      1320
     atgaaagaca ataataaaga catttataaa attgagcacc tacttcattg caaagtaatc      1380
     tttgagccac cgcgaccaaa gcgaacactt cctcaatgta caaactgcca aaaatatgga      1440
     catacaaaaa attactgcac caaagaccct acttgcgtaa agtgcgctgg aaaacacagc      1500
     tcatcatcct gtactattaa cacaagatcg gacagaacaa gcattaaatg tgcactatgc      1560
     agtgaaaacc acactgcaaa ctataaaggt tgtatggtgt acaaagcact gcaaattcaa      1620
     aaatacccaa ctcttcggaa aaaagaaata cctgtaacag aaacaacaca tcaaacgaca      1680
     caacacagta caacaaataa cgtagtaagc ttaaagacgc cagctttatc ctatgccgaa      1740
     gtcttaaata aaaaccaagt aactagccat caaaccaact caacacctca acctactatt      1800
     gtacctgata tacagcctgc ttcaactcaa ttaagccaaa ctgcacaaaa tgattttgac      1860
     gaacttaaac aaatgatgaa acaattaata gcccaaatga caaatatgat gaacattttc      1920
     acgcttttat tattcaaact tgacaaataa acacctaaca atcgccatct ggaatgctaa      1980
     cggactttca cgccatttac atgaactaaa aacattctta aatgaaaagc aaattgaggt      2040
     catgctcatt tctaaaacac acttaactga gaaaacctat tatataaaca tacctaacta      2100
     taatatttct tctacttatc acccggacgg taaggcccat ggtggtactg cagtaataat      2160
     taaaaaaagc atcaagtgca tagagctcga tggattcaaa aaggactaca tacaggctac      2220
     tactaaatcg acctcagaca caacgggtcc aataaatata tctgcagttt attgcccacc      2280
     taaatttaat aatacaaaag accaatacct cgatttccta aaatcactgg gaaatcggta      2340
     cttggcagga ggtgactata atgccaaaca cacaacttgg ggggtccaga cttaccactg      2400
     caaaggggac gtcaactgta tgaagcaata agaaacaata atagccgtgc tctaagcaca      2460
     ggagagccga cttactggcc aactgacaca aataaactac tggatttaat tgacttctgc      2520
     attacaagaa atataacatg cgagaaccta acaataaaat catgcctaga cctctttccc      2580
     gaccattccc caatattact tacattacat ggtgggctag aagaaaacag caacgactct      2640
     cctttattta aagacaaaac aaattggaac atgtttcgcg acattttgga acagaatagg      2700
     aatataaata tctctctaaa gacaaacaac gcactagact ccggagtagc atatttaaat      2760
     gagaacatca tagatgcagc aacgcaatcg acaccatcta taaaaatgaa atgagaaaaa      2820
     tcaggcaaaa gcgtacactt aggaggatac ggcaaaggac taggcatcca gaagataaaa      2880
     acaaactaaa tagagcaaca gacgagctca agagaactct cagggaagac aaagataacc      2940
     gacttcaata ctaccttagc aaacttgaga ctaccttatc tacaaattat tccctgtgga      3000
     aagcgaccaa aaaatttacg aactcaacta tacacaagcc acctataaaa agaaacaaca      3060
     acacatgggc aagatcaaac aaagaaaaag cagacaccat ttacaacgac aatgctgagc      3120
     ttccaagaca aatcaccaac ttaaattgtg caattaaaac tataacaaag gcagaaatta      3180
     aatctcacat aaaacaaatt aaaaacaaga aagcccccgg atatgattta atcggaggaa      3240
     aaattcttaa agaactaccg gacgctataa tcacctatat tagaaacttg tttaacggaa      3300
     tccttcgatt gcagtacttt cccataactt ggaaggtagg ccaaattaaa gcaattccaa      3360
     aaccaaacaa aaacgccaat actgtaagct cgtacagacc aatcagctta ttacctgtcc      3420
     tctcaaaagt atttgaaaaa gtcctatttg aaaaactcct atttaataga atcgagccaa      3480
     tcctaaaaca aaaaaatata atacctcctc accaattcgg ctttcggaag cagcactcga      3540
     ctgtccaaca ggtccatcga gtaattaaca aaataacaga cgattttgac aaaaagaaat      3600
     tttgctatgc tgtgtacttg gacattgcta aagcatttga caaagtatgg cacaaaggac      3660
     tgctgcataa gctaagaaat atactaccat ataacctata taccattctt caaagctata      3720
     taacggacag atatttctat attaaatacg acaatgaatg ctcagatatt atgccagtgt      3780
     cagcgggtgt tccccaaggt agtgtgcttg ggcccatatt atacctgatt tatacctccg      3840
     atattccagc gccaactacc cctggatcaa tgattgcgac gttcgcagac gatactgtgt      3900
     taatgtcgtc aagcgcgtgc gaaaaaacag ctgcaagtac actacaacaa atcatgacac      3960
     aaacagtatc ctggtttgag agatggggta tcgagataaa taaagacaaa actcaacaag      4020
     taatatacac aaaacgacaa cccaaaaact tcgcaattaa aatcaatgac aatcaaatat      4080
     tattacaccc atatgccaag taccttggac taactattga ctcaaaacta acatggaaac      4140
     agcacattct aaataaacga aatgaaataa aaaacaaatt tcgacaactt aactggctaa      4200
     taggaaaaca ctcaaaacta gaattacata ataaaatagc aatatacaag gcgataataa      4260
     aaccaatatg gacgtatgga atagaactct ggggaactgc cagtaaatcc cacttacagc      4320
     taattcagcg aacgcaatca aaaatgctca gaataatcac aaaagccgaa tggtacatta      4380
     gaaacgaaga tatacataat gatttaaaca tagaaacagt caacgaaact attaaaaaaa      4440
     agcagcaaaa aacacacaaa tcaactactt agccaccaaa actcaaactt gagacaaata      4500
     ccgatgacag agttggaacc aagaagatta aaacgcagaa ctccaacaga attaaactat      4560
     taaattatta atgtattagc gtatccttgc actgggaagg gccgcttctt ttctttttca      4620
     catctagtca accaattact tattgttatt ttttaaaaaa cagattgtaa tttaaagaaa      4680
     aa                                                                     4682
//
ID   FW2   standard; DNA; INV; 3961 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0067421; Fw2.
XX
FT   source          nnnnnnnn:1..3961
FT   SO_feature      CDS ; SO:0000316:2..1249
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:; Fw2\ORF1"
FT                   /protein_id=""
FT                   /translation="XSTTQTAIDRYIQIKRKLSPQNYSMGNKSKINCDITRQKTNMPNN
FT                   DNRFAILADLDDLPNSDKDIKKTPKPPPIYIREKSSSALVNKKMDLIEKDSFHIIPLTK
FT                   GNIHETKVQVKTEVNFRALTKYLNDAKKNFYTYQPKSSKGLQSSIKGLRPEITPEEISG
FT                   AQIEQGFKPKSVINIFNKDKKPQPLFKVELEPDSWALKKNESHPIYKLQYLLHRRISVE
FT                   EPHKRKGPVQCANCQEYGHTKTYCTLRTVCVACGELHSSVNCPSNKADPGMKKCSNCGG
FT                   NHTANYRGCPVYKDLKNRLHQKVTMMRGQSTPSTIIPSKHTPDVHLNSLTNRNVTFASA
FT                   LKSGLASTNPTTPFPLAEQNKVNADQPTGQPQGNIETMIFNLQQSMTEFMTFMRTTMEN
FT                   LMRNQDLLIQMLVSQQSK"
FT   SO_feature      CDS ; SO:0000316:1256..1249
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:; Fw2\ORF2"
FT                   /protein_id=""
FT                   /translation="MAPLRITLWNANGVSRHKLEMAQFLQDKHIDVMLLSETHLTNKYK
FT                   FQINGYIFYGTNHPDGKAHGGTGVLIRNRIKHTFRNDFGTNYLQATSLNIQLGNGQITL
FT                   AAVYWPPRFTISENQFLDFFNTLGDRFIAAGDYNAKHTHWGSRLVTAKGKLLYKTIIKV
FT                   SNKLSCASPGTPTYWPTDPRKIPDLIDFAVTRNISHNHINAESLPDLSSLAGLINYLQY
FT                   ADLKNSPCRVTSNRTNWLKYKKFVSSHIQCLNPRKKQTVQYMQRKPNVQIEQLVLKKRR
FT                   LRREWQSYRSPFAKQGLNNATHTIRKEVINEQECAQRPYIAQLSPFSTKYPLWGLHPSV
FT                   SPPVESVVPIRNSAGEWVRSDKHRASTFAEHLQNVFQPKPATNNFVLQEQTVVSQTTQN
FT                   TIEFRPTEIAKIIKELKPNKSPGSDLINPKMIIELPFCAVQTICQLFNAINRIGHFPSL
FT                   WKKSIIIMIPKPGKDHTVPSSYRPVSLLPCMSKLFEKCLLTFIIPYLRTFNKIPEHQFG
FT                   FQEKHGTIExVNRITTEIRTAFEKREYCTAIFLDVAQAFDRVWLDGLMHKIMSTLPECT
FT                   HKLLKSYLHNRVFSVRCGTVTSEDHIIEAGVPQGSVLGPTLYLLYTADIPTSRQLTIST
FT                   FADDTAILSRSKCPRQATAQLALYLAHIEKWLSDWRIKVNEQKCKHVTFTLNRQDCPSL
FT                   ILNNTVIPKSNEVTYLGIHLDRRLTWRRHIEAKRTHLKLKANSLHWLLSIRSPLRLEYK
FT                   VLLYNSVLKPTWTYGSQLWGNASNSSVEIIQRAQSKILRTITGAPWYVRSDNLHRDLFI
FT                   LPVRDEIAKQMEKYRNKLRAHPNRLARDLTRLSSRTRLRRNDMPTQR"
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 3961 BP; 1386 A; 941 C; 701 G; 932 T; 1 other;
     atcgaccaca cagactgcta tagatcgata catacaaata aagcgaaaac taagcccgca        60
     aaattattca atgggtaata aatcaaaaat aaattgtgac ataacaagac agaaaactaa       120
     catgcccaac aatgataacc gatttgccat tttggccgat ttagacgatc tgccaaattc       180
     tgacaaagac attaagaaga cccctaagcc gcctccaatc tacatcagag aaaaaagttc       240
     cagcgccctc gtaaacaaaa aaatggacct tattgagaaa gacagtttcc acataattcc       300
     cctgaccaag ggcaacattc atgaaacaaa agtgcaagtc aaaacggaag taaacttcag       360
     agcgcttacc aaatacctca acgatgccaa gaaaaacttt tatacgtacc agccaaaaag       420
     cagcaaggga ctacaaagta gtattaaagg ccttaggcct gaaataaccc ctgaggaaat       480
     atcaggagcc caaatagaac aaggttttaa gccgaaatca gttatcaaca tatttaacaa       540
     agataaaaag ccacaacctc ttttcaaggt cgaacttgaa ccagactctt gggcattgaa       600
     gaaaaacgag agtcacccca tttacaagct gcaatatctc ttacaccgta gaatctctgt       660
     tgaagagccg cataagcgca aaggacctgt acagtgtgca aattgccaag aatatggtca       720
     tacaaaaact tattgtaccc ttcgcactgt atgtgtagct tgtggtgagc ttcacagctc       780
     tgttaactgc ccatcaaaca aagctgaccc cggtatgaaa aagtgtagta actgcggagg       840
     taaccacaca gcaaactaca gaggttgccc tgtatataag gatctaaaaa atcggctaca       900
     ccaaaaagtg actatgatgc gtgggcaaag cacgccgagc acaattatac cctcaaaaca       960
     tacacctgat gtccacttaa acagtctgac caacaggaac gtaacatttg caagtgcgct      1020
     taaatcaggt cttgcatcta caaatcctac aactccattc ccactcgctg aacaaaacaa      1080
     ggtaaatgct gatcagccaa caggacagcc acaaggcaat attgaaacaa tgatctttaa      1140
     cttgcaacaa agcatgaccg aattcatgac atttatgaga acaaccatgg aaaatcttat      1200
     gcgtaatcag gatctattga tacagatgct ggtatcgcag cagtcaaaat aatcaatggc      1260
     tcccttacgt ataactctat ggaatgccaa cggcgtttcg cgacacaagc ttgaaatggc      1320
     tcaatttctc caagacaaac atatcgatgt aatgctcctt tctgaaacac atcttacaaa      1380
     caagtacaag tttcaaataa atggttatat attctacggc accaaccacc ctgatggtaa      1440
     agcacatgga ggcactggag tcctgattag aaaccgcata aaacatactt tccgcaacga      1500
     ctttgggaca aactacttac aggcaacatc tttaaatata cagctgggta acggacaaat      1560
     aacacttgct gctgtatact ggccacctcg ctttacgata tccgaaaacc aatttttgga      1620
     ttttttcaac acactagggg atcgcttcat agctgctggt gactacaatg ctaagcatac      1680
     gcactgggga tctcgtcttg taaccgctaa gggaaaacta ttgtacaaaa caattattaa      1740
     agtaagcaac aagcttagtt gcgcctcccc gggcacacct acatattggc caacggaccc      1800
     cagaaagata ccagacttga ttgactttgc tgttacaaga aacatctctc ataatcatat      1860
     aaacgccgaa tctctcccag acctatcttc tctggccggg ctcattaatt atcttcaata      1920
     tgcggatctg aaaaattcac cctgtcgagt gacatccaat agaactaact ggctaaaata      1980
     caagaaattc gtaagttcgc acattcaatg cctgaaccca agaaaaaaac aaactgtaca      2040
     gtatatgcaa cgtaagccaa atgttcaaat tgagcagctt gtcttgaaaa agcgccgcct      2100
     acgacgagaa tggcaatctt atagatcgcc atttgcaaaa caagggctca ataacgcaac      2160
     tcatacaata agaaaggagg taatcaacga gcaggaatgc gcacaacgcc cctacatagc      2220
     gcaattatca ccctttagca caaaataccc attatgggga ctacacccct ctgtaagccc      2280
     accggtagaa tctgttgtgc caataagaaa ttctgcaggt gaatgggtcc gcagcgataa      2340
     acatagagct tctactttcg ctgagcacct tcaaaacgta tttcaaccaa agccggcaac      2400
     gaataatttc gtattacaag agcaaacagt tgtaagccaa acgacacaga atacaataga      2460
     atttcgacca actgaaattg ctaaaatcat taaggaatta aagcctaata agagccccgg      2520
     cagcgatcta ataaacccta agatgatcat cgaacttcca ttttgtgccg tccaaactat      2580
     ttgccagctc ttcaatgcaa taaatagaat tggccacttc ccttcgttat ggaaaaagtc      2640
     gatcatcatt atgataccga aaccgggaaa ggatcataca gttccatcat catacagacc      2700
     tgtaagttta ctaccatgta tgtcaaaact cttcgaaaaa tgtctgctga cctttattat      2760
     accctatctg cgaactttta acaaaatacc ggagcatcaa ttcggttttc aggagaaaca      2820
     tggaacaatc gaasaagtca atcgaatcac aactgaaatt cgaactgcat tcgaaaagag      2880
     agagtactgc actgccattt ttctcgacgt ggcacaagca tttgacagag tctggttaga      2940
     tggcctaatg cataaaatta tgtcaacact ccctgaatgc acccataagc ttttaaagtc      3000
     gtacctgcac aatagagtgt tctcagttag atgcggcact gttacgtctg aggaccacat      3060
     catagaagct ggggttcctc aaggcagcgt acttggccca acactatatc tactatatac      3120
     agccgatata ccaacatcga ggcagctaac aatatctaca tttgccgatg acactgcaat      3180
     cctgagccgc tctaaatgtc cacggcaagc tactgcacaa cttgctctct acctggcaca      3240
     tattgagaaa tggctttctg actggcgaat aaaagtcaat gaacagaaat gtaaacacgt      3300
     aacttttacc ctcaacagac aagattgccc ttcgctcata ctaaataaca ctgttattcc      3360
     aaaatcaaat gaagttacgt atctaggtat tcatcttgac agacgactca cttggcgtag      3420
     acacatcgag gcaaaaagaa cacacctcaa actaaaagcc aatagtctac attggcttct      3480
     tagtatacgc tctcccctaa gactagaata taaggtctta ctctacaact ccgtcctaaa      3540
     accgacctgg acctatggct cccagctatg ggggaacgcc agtaacagca gcgtagaaat      3600
     catccaacga gcccaatcga aaatcctgag aaccatcacc ggcgcaccgt ggtacgttcg      3660
     aagtgataac ttacataggg atttattcat acttccggtc agagatgaaa tagccaaaca      3720
     aatggaaaaa tatcgcaaca aactacgtgc ccatccgaac aggcttgcga gagacttaac      3780
     acggctatct agccgaaccc gacttcgtcg taatgatatg ccaacccaac gataattatt      3840
     agggccacac aaactcatat cagttgcaat agtaactgtt agttaagtac tttttaagat      3900
     ttgtaaactt attgttagtc tcataatgag aagcttcaat aaacaaacca acgcataaaa      3960
     a                                                                      3961
//
ID   FW3   standard; DNA; INV; 3132 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0067420; Fw3.
XX
FT   source          nnnnnnnn:1..3132
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 3132 BP; 1051 A; 803 C; 557 G; 720 T; 1 other;
     agagaaaatc tcgaatactt ttgtaaacga aataattgaa cttgttcgaa aatacaactt        60
     ccgcataata ccccaaaaaa gggacagcat ccacgaaact aaggtccaag taaagaccga       120
     agagagcttt aggacgctta caaaatacac tacaaaaatc tactacacct atcaactgaa       180
     aagtagcaat ggccttcaag tcgttctaaa gaatatagac ctgaagtaac accttctgag       240
     ataacgcagg catttaatga taaggatttt aaagtaaaaa ccgtcttcaa cattctgaac       300
     aaagatagaa aaccacaacc actcttcaaa gttgagctgg aacctgacac taaagccatc       360
     cggaaaaaag atgtgcaccc aatctacaag ctaaagtttc ttttgcatcg tagaattacc       420
     gtagaagaac acgtagaaca cactagcgca aagggtcagt ccaatgcagg aactgtcaag       480
     aatatgtcca aacaagagga tactgcacat tgcgtccagt ttgtgtcatc tgtggagagc       540
     ttcatgactc tgctcattgc acgacaaata aaaagtgcgg aagctgtggc ggtaaccacr       600
     cagcaaacta tagaggctgt ccaatataca aagacctcaa aagccggctt cacccccgag       660
     taacgcctgt acgcctccat cacgcacaca atgcacttaa accaaagaac tctcagaaat       720
     aaacccagac gtatttttct caaccgcaaa gagatcctca tttggcccgg ggatcacctc       780
     acaaaatgtg actttcgcaa acgtcctgaa atggggactt actaaaccta gcactacgac       840
     aaccactcta catactgccc aaattgatcc gacaccgaat cctcgattac cgacgcaaca       900
     acaaagcaat atcgaaacca tgatgcatac tttgcagcag catatgattg aattcatgtc       960
     cttcatgcgg actaccatgc aagacctcat gcgtaaccaa aatctcctca tggagatgct      1020
     aatatcacaa cgttccaaat aatcaatggt tgccctacga atatcattgt agaacgccaa      1080
     cggcgtttca cggctttaac tttaaatagc tcaatttcat catgacaatc aaattggcgt      1140
     catgctactg tcggaaacac atctcactgc taaatataac ttccaaataa gcggcttttt      1200
     gttttacgga acaaatcatc cagacgaaaa agcacatggc ggaaccggta tcctgattag      1260
     aaatcgcatc aaacaccacc attatagttt gcagctattt acatgcaggc cacatctata      1320
     aacgtactac aaggaagcgg caatattacc ctcgcagcgg tatactttcc cccacgttat      1380
     attgtatccg caacaatttc tggacttctt caactcgcta ggggatcatg tcattgctgc      1440
     aggtgactac aacgccaaac acaccaactg gggatcttgc tcgtcacccc taaaggaaac      1500
     agttgtataa cgccatcata aatgtacata ctggcctacc gacccgaaca aaattcctga      1560
     tttgatcgat tttgcaatca ccaaaaacat ccctcgaaac ctgaccactc gccagtcctc      1620
     ttaatactga acgccctcca atgtcctgag actacaaagc agactagcag attaacatca      1680
     aaaagaacaa actggatcaa gtacagaaac tatataagct cacatatcgc gctgaatcca      1740
     aggcttaact ctgacgccga tattgaatcc gcaacaaata ctctcgagag tgtcttagct      1800
     gcagctgccc gcatctctac accaaaaatt gggagtgcac ctcgtagccg ctcgatggca      1860
     aggcttgtca tcgagcggct cgttcttcaa aaacgacgga tgcgacggga gtggcaagtc      1920
     catagatcgc aattcgcaaa gcaaagacta ataaatgctt cacgtaaact ctccaatgca      1980
     ctctggcaag aagagaaaaa cgcccaacgt cgctatatag aacaactatc aacatccagc      2040
     agtaaaatct cactatggaa agcccatccc agtttaacta ccccggcaga aactatttca      2100
     cctataagaa ccatcgcagg tggatgggcc cgaagcgata aagagagagc taccacattc      2160
     gcaacgcacc ttcaacatgt gttccagccg aaccctgcta caagttcgtt tgtattaccg      2220
     acgctaacag acgacaacca aacaccacat gagccaatcg aatttcgagc caacgaaata      2280
     tcaaaaatta taaaggatca actatatccg aaaaagtccc caggatgtga tctaacaact      2340
     ccaaagatta ttattgagct tccatactgt gctatatgca ctatctccca gctctttaac      2400
     gctatcacaa acctcgggta ctttccagag agatggaaaa agtcgatcat aggaatgata      2460
     ccgagggcag gaaaggacct ctcagtttcc tcatcataca ggcctataag cctattgtct      2520
     cgtctttcga aactcttcga aaaatgtctg atgacccgga tcacccccta tctgatgaca      2580
     cgtaacctta ttccagcgca tcagttcggc tttcgaaaga aacatggaac cattgaacaa      2640
     gtcaatcgaa taacatcaga aatacgaact gctttcgaaa aacgcgaatg cacaggaata      2700
     tttctggatg tctcccaggc atttgacaag gtctggctag acggtttaat gtttaacatc      2760
     aaagcaatgc ttccccaaaa cacccacaaa ctcttgaagt cgtatctcta caacagagcc      2820
     tttgctgtga ggtgtaactc tgatatgtcc aatgaccacg ctataaacgc tggagtactt      2880
     ggacctacgc tatacgtcct ttatagatca gatataccca caagcagact gttaacgact      2940
     tctacatttg ccgacgacac agcgatttta agtcgatcca aatgtcctct acaagcaaca      3000
     actcaactct ctcgtcactt attggctgtg gagaggtggc tatctgattg gcgaatcaaa      3060
     ataaacgaac aaaaatgtaa gcaagtaaca ttcacactca accggcaaga ctgcccttcg      3120
     atcacatctg aa                                                          3132
//
ID   HELITRON1_DM repbase; DNA; DRO; 564 BP.
XX
AC   AE002840;
XX
DR   FLYBASE; FBgn0067418; Helitron.
XX
FT   source          AE002840:9827..9264
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 564 BP; 177 A; 115 C; 107 G; 165 T; 0 other;
     ctgcgcgcga aagaatacat taatttgcga gacgctatca acaacaacgc cgacgtcgcc        60
     gaaatcggta accatatcat tttaccgtaa tcgtaaatag gcagtccacg tcatatgcaa       120
     gaatatttac aggatgctct gactttcgtg cgcgaatatg gacgaccatg tttatttatc       180
     acgttcacat gtaatccaaa atggccagag attacatctt tactactgcc tggccaaatg       240
     caatgcatcg ccatgacatt acagcacgtg tgttcagaca aaagttgaag tctttaataa       300
     gtttcattac taaatcacat gtattttgtc ctacactttg ctggatgtgt tcggttgagt       360
     ggcaaaagcg gtttggtttg gttcaacgac agaatctgtc ctgaagtaat cgatagtatt       420
     atttctgcgg aaatattgta gatccatcca cttcattgct ttgcatggct aatagaaatg       480
     tactaaaaat gtcccaaaaa attttaccaa taatacggtc agaaatgtcg acgaatacct       540
     aatatatcgt cgaagaaatc ctga                                              564
//
ID   R1-2   standard; DNA; INV; 3216 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0067405; R1-2.
XX
FT   source          nnnnnnnn:1..3216
XX
FT   SO_feature      CDS ; SO:0000316:<1..716
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:; R1-2\ORF1"
FT                   /protein_id=""
FT                   /translation="XXCSAVVMCDDPSIPGKQSAERVRKEVAPALGVRVHEVRELKCGG
FT                   AVIRTPSVSEMKKVVANKKLAEVGLKVQPKKSQRPKVQVFDVDSGIQPDGGIVRQQFKE
FT                   EFSPAAFMKEMHLNTKPWSVTDGERANLTLEVDEKALNVLEQTGRVYIKWFSYRCRSLV
FT                   HTYACHRCLGFDHKVSQCRVKETICPQCGQAGHTAPRCTNPVDCRNCRFKGHPSRHSML
FT                   SFTCPIYGAVLARVNARH"
FT   SO_feature      CDS ; SO:0000316:719..3216
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:; R1-2\ORF2"
FT                   /protein_id=""
FT                   /translation="MFSFLQANCGRGRAPTIELxVRLRDSGHLFALVQEPYVDLAGRIT
FT                   VFSDRRGKAAVYVDSTDSICMPIEPLVTEFGVCVSVTGSFGSIFLCSVYCQFNTGLEQ
FT                   GVPSGMRYLGYLDAVLLLASRTPVILGLDANAVSPMWFSKLPERAQGSANYLRGELLS
FT                   DWIQGCRAGVLNMPCDAFTFETPYARSDIDVTLTNDAASTCATYDWRVDEWDLSDHNI
FT                   INVVVTRDPPNTVESFAPVPSWNFSAARWRPFEDEVTRLASELPDEFADTPLDDQVSA
FT                   VRSLVHSVCDQVLGRRRPKTARKIVWWTAELSSKRQEVRRLRRRLQTARARASHDAEQ
FT                   LVSQLREISDQYKELILKYKEDNWRRLVGENKDDPWGQVFRICRGRKRTTELGCLRXG
FT                   GRQYVTWHDCAGVLLRTFFPFSSFRHPLSFLKRFHHRLSSEVDACVARLKSRRSPGMD
FT                   GITAVIFKAVWRAIPEHITAFYSRCIRSGYLPSKWKRTIAVALLKGSDKDRSDPASYR
FT                   GICPLLFVFGKVLEGIMVNRLKDVLPDGSRWQFGFREGRCVEDAWRHVVSTVAANQAQ
FT                   YMLGIFVDFKGAFDHVEWDVVMRRLIDSGCREASLWRSFFSGRSASLVSRYGEVTVPV
FT                   TRGCPQGSISGPFIWNLMMDSLLQRLEPLRGFSALADDLLLFVEGTRIVLESKGEQLM
FT                   SVVGAWEVGVAVLTSKTALLLGHFAQSRHTTVRFAGASLPYVDKYRYLGVTVVERLNV
FT                   LPHIKSLRDRLTGVVQALARVLCVDWGLSPRARRTIYAGLMVPCALFGASVWYDGPSS
FT                   AMRHLVSCQRRILLGCLPVCRTVSTVAMQVLXG"
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 3216 BP; 692 A; 827 C; 943 G; 751 T; 3 other;
     cttgctcggc ggtagtgatg tgcgacgacc cgagcatacc tgggaagcag agtgctgagc        60
     gggtccgcaa ggaggtcgcc cctgccctcg gtgtccgtgt acacgaggtg cgtgagttga       120
     agtgcggtgg agccgtcatc cgcacaccat cggtgagcga gatgaagaag gtcgtcgcga       180
     acaagaagct tgccgaggtt ggtctcaaag ttcagccgaa gaagagccaa cgacccaaag       240
     tccaggtgtt cgacgtcgac agtggaatac agcctgatgg aggaattgta cgtcaacaat       300
     tcaaggaaga gttctcccca gccgctttca tgaaagaaat gcacctcaac acgaaaccgt       360
     ggtcagtcac cgatggcgaa agagctaatc tgacgcttga ggttgacgaa aaggcgctga       420
     acgtccttga gcagaccgga cgggtctata tcaagtggtt cagttaccgt tgccggtcgc       480
     tcgtccacac ctatgcttgc cataggtgcc ttggatttga ccacaaagtt tcccagtgca       540
     gggtcaagga aaccatttgt ccacaatgtg gacaagctgg ccacacagca cccagatgca       600
     cgaatccggt ggactgccgg aattgtcgtt ttaagggcca cccttcgagg cattcaatgc       660
     tgtccttcac gtgccccatc tacggtgcgg tgcttgcgag ggtgaacgct agacattaat       720
     gtttagcttc cttcaggcaa attgtggccg tggccgagct cctaccatcg agctcgsagt       780
     ccgcttgcgc gactctggcc acttgttcgc attggtgcag gagccttatg tggacctcgc       840
     tggacgaatc acgggagtcc catccgggat gcgtgtgttt tcggacaggc gtggaaaggc       900
     tgccgtctac gtggacagca cggattccat ctgcatgccg atagagccgc ttgtcaccga       960
     gtttggagta tgcgtgagcg ttactggaag ttttggctca atcttcctat gctccgtgta      1020
     ctgccaattc aacaccggac tcgaacagta cctcgggtac ttggatgcgg tgctgctgct      1080
     agccagccgc acgcctgtca tccttggtct cgacgcgaac gcagtatccc ccatgtggtt      1140
     tagtaaactc cctgagcgtg ctcagggatc agctaactac ttacggggtg agctgctgtc      1200
     tgactggatt caaggatgtc gagccggagt gctgaatatg ccgtgtgacg cgttcacatt      1260
     cgagactccc tacgcacgta gtgatatcga tgtgacactc accaacgatg cagcgtctac      1320
     gtgcgctacg tacgactgga gagtggatga atgggatctt agtgatcaca acattatcaa      1380
     cgttgtggtt acgcgagacc caccaaacac agttgagagc tttgctcctg tgccatcctg      1440
     gaacttctcc gctgcacgct ggcgcccatt tgaggatgag gtgacaagac tggcttcgga      1500
     actcccggac gaattcgccg acacgccgtt ggatgaccag gtctctgcag tgcgctcgct      1560
     cgtgcactct gtgtgcgatc aagtgctggg acgcagacga cccaagaccg caaggaagat      1620
     agtttggtgg actgccgaac tttcttctaa acgccaagag gtcaggagac tgaggcggcg      1680
     gcttcagacc gctcgtgcgc gcgcaagcca cgatgccgag caacttgtct ctcagttgag      1740
     ggaaatctca gatcagtaca aggagctcat tctgaagtac aaagaggata actggaggcg      1800
     cttagtggga gagaacaagg acgatccatg ggggcaagtc tttaggattt gccgtggccg      1860
     caaaaggaca accgaactcg gttgtcttcg ctnaggtggc aggcagtacg taacctggca      1920
     cgactgcgcg ggtgttcttc tccggacctt ttttccattc tccagttttc ggcacccact      1980
     gtcattcctg aagagattcc accaccgctt gtcctctgag gtagacgctt gtgtcgcaag      2040
     gttgaagagc agacgctctc ccggcatgga cggcatcacc gcggtgatat tcaaggcggt      2100
     gtggcgtgcc attcccgagc acatcacagc gttttactcc cgctgtatca gaagtggata      2160
     ccttccctct aagtggaagc gcacaattgc agtggcacta ctcaaagggt cggataagga      2220
     caggagtgat cctgcttctt accgcggtat ctgtccgttg ttgtttgttt tcggcaaagt      2280
     gctagagggg atcatggtga accgattgaa ggacgttcta cccgatggaa gcagatggca      2340
     atttggattc cgagaaggac gctgcgttga ggatgcttgg agacacgtcg tgagcactgt      2400
     tgctgccaac caggcacaat atatgctcgg aatcttcgtg gacttcaaag gagccttcga      2460
     ccacgtggag tgggatgtcg tgatgagacg actcatcgac tccggctgcc gagaagccag      2520
     cttgtggaga agcttcttct ctggcaggag tgcaagttta gtcagcaggt atggtgaagt      2580
     gactgttccg gtaacacgag gttgccctca gggatccatc agcggtccat ttatttggaa      2640
     ccttatgatg gactcacttc tccagcgtct ggagccactg cgtggtttca gcgcgcttgc      2700
     agacgacttg ttgcttttcg ttgagggtac ccgaatcgta ctggagtcga aaggcgaaca      2760
     gctcatgtcc gttgttggag catgggaagt cggcgttgcc gtcctcacca gcaagacggc      2820
     gctgctgctg gggcattttg cccagagtag gcacactaca gtacggtttg caggagcaag      2880
     cctgccgtat gttgataaat accggtacct tggcgttaca gttgtcgagc ggttaaatgt      2940
     tcttccgcat atcaagtcgc tacgtgatcg gctgactgga gttgtgcagg cattggcacg      3000
     cgttctttgt gtggactggg gcctcagtcc acgcgccagg cggacaatat atgccggact      3060
     catggtgcca tgtgccttgt ttggtgcatc ggtctggtat gatggaccca gctctgccat      3120
     gaggcatctg gtctcctgcc agaggcgaat cctgcttgga tgcctaccgg tatgccgtac      3180
     agtgtccact gtggcaatgc aggtgctcgs tggcgc                                3216
//
ID   TC1-2   standard; DNA; INV; 1644 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0069340; Tc1-2.
XX
FT   source          nnnnnnnn:1..1644
XX
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..26
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1619..1644
FT   SO_feature      CDS ; SO:0000316:356..1375
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:; Tc1-2\ORF"
FT                   /protein_id=""
FT                   /translation="MGKTKELSEFIKNEIIIKYNSGISVQNIIDLYKIPRATVYYQINK
FT                   YKKTHTTKNVARSGRPRKTTQKDDGYILRKFKQNVLQTPRSVAKELKEGAEIDISERTV
FT                   RRRLKEADFGTYVSRVIPLITPRNKLKRLDFAKKYVGQPASFWNNVLWSDESSFEFHCS
FT                   KKIFFVRLPKQYRKKVAPVCQRINHSGGSVMFWGCVAFTGLGDLVPVDGTMNQRKYLDV
FT                   LNNHAFPSGDKLIGESFILQQDNAPCHKAKLITQFLKDVCVNTLDWPPQSPDLNIIENL
FT                   WSYLKRKRSANLSRSREETILEIQTLWKDISIDYIHSLVQSVPKRLQKVIDAKGGYIFY
FT                   "
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 1644 BP; 570 A; 270 C; 291 G; 513 T; 0 other;
     cactagtggg cataagtatt tagacaccat tagcttgcaa ctgccgggct atgcttttca        60
     tagtacagtc aaataaataa gtaaactatt gatgataaaa caaagagtgc aattacagtt       120
     acacgcgaga ggtatgtttt gccgtttacc ttttcaatta tccttctgct gataagaaag       180
     ctagacagac aacgatttgg gcggtggcaa aagtatttag acatcacatt taattagttc       240
     gcattgatct gttgttcgaa gaatatcaaa tttttgactt ttttagatca tttgaacatt       300
     tgttcttgat aacgtgttac tacctacttt tatttcattc ataaatttgt taaacatggg       360
     gaaaacaaag gaactgagcg aatttataaa aaatgaaata ataattaagt ataattctgg       420
     tatttcggta caaaatatca ttgatttata caaaattcca cgggcaacgg tgtattacca       480
     aataaataaa tataaaaaaa cacacacaac caaaaacgtt gcgcgtagtg gccgaccacg       540
     taaaacaact caaaaggacg atggttatat tttacggaag tttaagcaga atgttctaca       600
     aactccccga tcggttgcca aagaactaaa agaaggagca gaaatcgata tcagtgaaag       660
     aacggttcgc agacgtctta aggaagccga ttttggaaca tatgttagca gagttatacc       720
     actaataact ccacgaaata agttaaagcg cctcgacttt gccaaaaaat atgttggtca       780
     gcctgcatca ttctggaaca atgttttgtg gagcgatgaa agctcttttg agtttcactg       840
     ctcaaaaaaa attttttttg ttagattacc gaaacaatat cggaaaaaag tggcaccagt       900
     atgtcagaga ataaatcatt caggagggtc tgttatgttt tggggatgcg tagccttcac       960
     tggcttggga gatttggttc ctgttgatgg aaccatgaat caaagaaaat atttagatgt      1020
     ccttaataat catgcattcc cctctggtga taaattgatt ggagagtcct tcatactcca      1080
     gcaggataat gctccctgtc ataaggccaa actgattacg cagtttctga aagatgtttg      1140
     cgtaaacaca ttggattggc cacctcaaag tccagacctc aacataatag aaaacctctg      1200
     gtcatattta aaaagaaaaa ggagtgcaaa cttatctaga agtcgcgaag aaacgatttt      1260
     ggaaattcaa accttatgga aggatatttc aatagattat atccacagct tggtacagtc      1320
     tgtaccaaaa cgtctgcaaa aggtgataga cgctaaggga gggtatattt tttattaatt      1380
     tgtcataatt ttttagttga cttttttttt tcaatttata acatttaaat aatttgtcca      1440
     aatacttatg ccactgctaa tttgtaaaaa agtaattttt gttaaatcaa caatgaagtt      1500
     atccatatgt ttatgttacc taatttaact acgatagtct acctatttac taaaattatt      1560
     aaacaatttt gctttaagta aacaatgagt tacaaacaaa tatattgaat atatttcttg      1620
     tccaaatact tatgcccact agtg                                             1644
//
ID   G5A   standard; DNA; INV; 2841 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0069433; G5A.
XX
FT   source          nnnnnnnn:1..2841
FT   SO_feature      CDS ; SO:0000316:16..2727
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:; G5A\ORF"
FT                   /protein_id=""
FT                   /translation="MGPLRIPTWNSIGASLKTNEFLALIELHDIDILLLSEVHFSSRSN
FT                   FRVNGFTLHTANHPDDSQHGGAAILVGSNISHQPFATLSQNHIQAVVIQLTASRGNFNV
FT                   ASVYCPPTLRWTDAIVGQFITQFGTKFLAAGDWNAKHRWWGNYRMRTRGRVLYSALAEE
FT                   GIDIVATGEATCYPYRATASPSAIDFGISKGFRQQQIKVQLLSSDHLPLLFELDEDAQS
FT                   FRSVTKMLSPQANIRIFKEHIEATVELNIPIDTCSRLEAYVDYFTPAIIEAARQATPTP
FT                   HQARLTAIRRPPILSIEARDLLSHKRRLRRRYIATGDPSIYQQYSSTTNRLRRLLANNR
FT                   KANLDTLLEGAGPDSNSGFSIWKLTRGIKRQPLFQSPIQDRGGLWLKTDDEKASAFASH
FT                   LSSTFMPFNLTDDTNREAIANFLDTPTAPTRPIRHTSPQEVMMQLKALQPKKNPGYDGI
FT                   DNRTAKFLPRKGVLALVKIFNVMLRLGHFPRQWKRARIVMIPKPGKSPTQIDSYRPISL
FT                   LPTFSKVFERILLTRLMELPQVTEHIPQHQFGFRKSHGCPEQIHRLVKHITHGFEHKLY
FT                   TVGVFLDVKQAFDKVWHEGLLYKMKDLLPAAHYAILSSFIADRTFDVAVRDSRSSMEHI
FT                   HAGVPQGSVLGPFLYTLYTADMPTPVNNTDEASPAQLILATYADDTAMLASHSSLQFAS
FT                   NAVQEWLHAIERWTAKWNIAINCTKSACVTFTLRPQTCLGLLFDGNTIDYVSSHCYLGV
FT                   HLDRTLSWKAHITAVRAKSSWKLKKLDWLFHSSKLHMATKALLIKAILGPTLTYAIQVW
FT                   GTASKTQLNRLRVIQSRAARHASGLPWYVSNRVIERDLKVVPLGDQINFHSSRYADRLS
FT                   AHPNTLANDLVDPISLRRLKRIHPHELLTRKIV"
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 2841 BP; 811 A; 761 C; 588 G; 680 T; 1 other;
     cctctgcatt taaaaatggg cccccttagg ataccaactt ggaattcaat tggggcctcc        60
     ttgaagacca atgagttcct cgctcttatt gagcttcacg acatagacat cctcctgttg       120
     tcagaagtcc acttctcctc ccggtccaac ttcagggtca atggctttac cctacatact       180
     gccaaccatc cggatgacag ccaacacgga ggcgcggcga tccttgttgg atcaaatatc       240
     tctcatcaac cattcgccac tctatcgcaa aatcatatcc aagcagtagt tattcagctg       300
     actgcaagca gaggaaactt taatgttgcc tcagtatact gccctccgac tcttagatgg       360
     acagatgcta ttgttgggca gttcatcaca caatttggca caaagttcct tgcggcaggt       420
     gactggaacg caaaacacag atggtgggga aattacagga tgcgtaccag aggtagggtg       480
     ctgtattctg cacttgcgga agaaggaatc gacatcgttg caactggaga agccacttgc       540
     tacccctatc gtgcaactgc ctctccaagt gccatcgatt tcgggatctc caaaggcttt       600
     agacagcaac aaattaaggt gcaactactg tcatctgayc atctcccctt gctgtttgag       660
     ctagatgaag acgcccaatc atttagaagt gttacaaaaa tgctgtctcc acaagcgaac       720
     attcggatat tcaaagaaca catcgaggct actgtagaac tcaacattcc cattgacacc       780
     tgcagtaggc tggaagcgta cgtcgactac ttcacacctg caatcattga agctgcaagg       840
     caggctacac caaccccaca tcaagctcgt ctcacggcca taaggaggcc tcccatttta       900
     agcatagagg ctagggactt gctcagccac aaaagacgcc tcagaagacg atacatcgcg       960
     acaggagatc ctagcattta ccagcaatat tcaagtacta ctaatagact gcgccgtctg      1020
     ctagccaata accgtaaagc aaacctggat accttattgg agggtgctgg tccagatagt      1080
     aatagtggat tctcaatatg gaaactcacg agaggcatca agagacagcc tttgtttcaa      1140
     tcaccaattc aggatcgagg tggcctctgg cttaagacgg atgatgaaaa agcaagtgct      1200
     tttgcttcgc acctgtcctc caccttcatg cccttcaatt taacagacga caccaatcgt      1260
     gaagccatcg caaatttttt ggatactccg actgctccga cacgccccat aagacatacc      1320
     tcaccgcagg aagtaatgat gcaactaaag gctttgcaac ccaaaaaaaa ccctggttac      1380
     gatggcatag acaaccgaac tgcgaaattt ctaccacgca aaggagtgct tgctcttgtg      1440
     aaaatattta atgtcatgct aagattaggt catttcccca ggcaatggaa gcgtgcgcgc      1500
     attgtaatga tccccaaacc tggaaagtca ccaacacaga tcgactcata ccgcccgata      1560
     agcctgctac caactttctc caaagttttt gagagaattt tgcttacccg cttgatggaa      1620
     ctgccgcagg taacagaaca catcccacaa caccaattcg gtttcaggaa gtctcatggt      1680
     tgccccgaac aaatccatcg ccttgtaaag cacatcacgc atggctttga gcacaagctt      1740
     tacacagtcg gcgtattttt ggacgtgaaa caagcgtttg ataaggtgtg gcatgaaggt      1800
     ctgctatata aaatgaaaga tctcctccca gcagcccatt atgccatcct cagctccttc      1860
     atcgctgatc ggaccttcga tgttgcagta cgagactctc ggtcaagcat ggaacacatt      1920
     catgcagggg ttccacaggg aagtgtgctt ggacccttcc tgtataccct gtacactgct      1980
     gacatgccaa cacccgtcaa caacaccgat gaagcgtccc ctgctcagct gatcctggcc      2040
     acctacgctg atgacaccgc catgcttgcg tcgcactcat ccttgcaatt cgcttccaat      2100
     gcagttcagg aatggctgca tgcaatcgag cgatggactg ccaaatggaa catagccatt      2160
     aactgcacta agtcggcctg tgtcacattt accctgcgac ctcaaacctg cctaggtctt      2220
     ctcttcgacg gaaataccat tgactacgtc tcatcccact gctacctcgg agttcacctt      2280
     gatcggacgc tgagttggaa agcccatatc acggcagtta gagccaaatc ctcttggaaa      2340
     ctgaaaaagc tggactggct tttccactca agcaaactcc atatggcaac taaggctctt      2400
     ttaataaaag ccatattagg tccaacactg acctacgcca tccaagtgtg gggaacagcc      2460
     tctaagactc agctcaatag gcttagagta atacaatcgc gagcggcacg acatgcatct      2520
     gggctaccct ggtatgtgag caaccgagtt attgaaaggg acttaaaagt tgtcccattg      2580
     ggagaccaaa taaacttcca cagcagccga tatgccgaca gacttagcgc ccacccgaac      2640
     acgttggcga atgatcttgt cgaccctatt tccctccgac gtctgaagag aatacatccc      2700
     catgaactcc ttacacgtaa gatagtataa tctctacatt tgtatacact ataattaagg      2760
     aacagaatcc ataatatctt ttaagctaca cattaggtta agttcagaag gaactgaacg      2820
     attcctactg actaataata a                                                2841
//
ID   G7   standard; DNA; INV; 1192 BP.
XX
AC   AC003788;
XX
DR   FLYBASE; FBgn0067419; G7.
XX
FT   source          AC003788:1880..3071
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 1192 BP; 364 A; 294 C; 257 G; 277 T; 0 other;
     tggtagctgg tgcagaaccg agaagcagaa agtcaacgcg ttcgccgacc atctgaaaaa        60
     cgtctttacc ccttattgcc gctgctctcc tgctgatgca gtcatttata ctcctggagg       120
     aacccctcga gcacgttgag cccataccaa cggtcacaga agaagaaact gctaaactaa       180
     ttgctgctgt caagtgcctt gaatttagat acggcacctt ggaaacgtgc cgaggtagta       240
     atgataccta agcctggaaa acctgagacc aatctcgctt tttatcgtcc cataagcttg       300
     ctgccgaaag agtattttta agtagagcat tgccagttat ggacgaagct ggcctgattc       360
     ccgatcacca gtttggcttc aggcggcgtc atcagaagaa atctgcccta gccttgaagt       420
     acggtttctg aagaccttcc tcaagggtcg caagtttgcg gtgaaatttg gtgaagcgcg       480
     ctctgatcat aaaggaattg gcccctgcta tacaatgctt acatggcaga actgactgtg       540
     ctgcagagcc gtgggagacg ctgcaaccga gctgatgcaa agctggacct cctaaacgcc       600
     tgacagaaaa agataactat agcggtcaac agcgaccagt taacggcttc cacattttct       660
     ctccgacccc acaatccctg aaaatgccat ataacggtat caccctcgat aggcgactta       720
     cctggaagcc gcatatcctg aaaaagataa accaagccaa ccagcccctc aagaaatatt       780
     attggcttat aggaagaaga tcaaagttac caacttcgtc caaggttccc atatataaag       840
     cgatcaggcc aatctggacg tatggcatcc aactatagca cagccaccgg cgctcacctg       900
     ctgaatgaca acgtcacctt ggattcccta gggtcggaga agagataaag aagtgcagcg       960
     atcggtacat aaagaggctt cataggcatc ccaacataac ggccatcttc ctactggaca      1020
     atagtgaaca acgccgaaga ctgcgcagga ctcatcccct agatttggct cgagagccgc      1080
     tgaataaata ttcaattcac ctgctaagtg tatgttaaaa aaattactta tccctggtgg      1140
     atatttttaa ataaataaaa taaaatattt gaactaaaaa aatatataat aa              1192
//
ID   GYPSY7   standard; DNA; INV; 5486 BP.
XX
AC   AE003788;
XX
DR   FLYBASE; FBgn0067384; gypsy7.
XX
FT   source          AE003788:34068..28834
FT   SO_feature      five_prime_LTR ; SO:0000425:1..251
FT   SO_feature      three_prime_LTR ; SO:0000426:5236..5486
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   Repbase says the LTRs are divergent by 10%.
XX
SQ   Sequence 5486 BP; 2005 A; 1066 C; 1059 G; 1356 T; 0 other;
     AGTTAACACA TTCAACGAGC AGCAAAGAGA GGCCAATGCA AGTACTGAAG CTTTCACGAT        60
     AAGAGGCGAG CTTTTGGCTT GGGATCAAAG GCGAGCTTAA GAAATAAGGG AAGAGCGAAT       120
     TGGATCATCG AACGCGTCGG TCGTCGCCAT GCAGACACAT ATTATTCAAT AAACTTACAA       180
     GCTCAAATAT AATCCAAATA TAATTCGTAG GCCATAGACA CGACATCCAT AAAAACACAA       240
     ATCTATTAAC TGGCGCCCAA CATTCACCTA CATTTCCCGA GACAACAAAA CTACGTTCAA       300
     CCGACTTCAA CTGCGGATTT TCTTTCAACA TCAACAATCA ACATCAATAC AATAACAAAT       360
     ATTAATTAAT AAAAAAAGGA TTAACTTAAC TTCTGTAAGT ACAACGCATA TTGGTTACTT       420
     AATAAGATCT CTAACTTTCA TAACGACCTT TAAATTAACG AAGGTTATTG ATGGTTATTA       480
     ATGACAAATA GAAGAAGACG AAGTTTTAGG CGACTTAGAG TAAAGTTTGA ATAGGTGGCG       540
     AGAGCATTTA CAAAACCAAA GTGTGGGAGG TGGGAGAGAA GAAAATTGAT GGTTAAAGAA       600
     GAATAAAGCT TGCGAAATGA ACTTATCGGC AGATCATTTG AAAGCAATAG TGGATAGTGC       660
     CGTTGCTGGT GCGATTGCTA GTCAAAAATA AATATTTGAT AAACAGCTGC AATAAATAAG       720
     TGCGCGTATA GAAAAAATTA CAGTGAACAC CCCAGAAGTG GAAACTTATA AAGATGCTGA       780
     AATTGTACCA GGTGTAAGAT GTACTGAACC ATTAGACATA GTAAAGTCTT TGCCAGATTT       840
     TGACGGAAAA AGTGAAACCT ATGTGTCATG GAGAAAAGCT GCCCATGTCG CTTTTAAAGA       900
     TTTCGAGAAT TACGAGGGCA GTTCAACATA CCATCAAGCA CTTGGCATAA TGCGAAAATA       960
     AAAAACTCGG CAAACACTGT GCTGGCGTAG TTTAACACTC CGCTGAATTT CAAGGCAATG      1020
     ATAAATCGTC TCGATTTTAC ATACGCCGAC AAAAGGCTAG TATATTTAAT AGAGCAGGAG      1080
     TTATCGACGT TAAGAGAGGG CGACATGGCA ATGACTGAGT TTTACGACGA AGTTGAAAAA      1140
     AAACTTACTC TCCTTACAAA CAAGACAATA ATGACATGCG ATACCACTTT AGCGATTAAC      1200
     GAAAAATACA GGTCAGACGC GTGTATTCAT AAGGGGAACA TAAAAGTCTT TGAGAGAGAC      1260
     TTACCAACAG CTCTCGCTCT AGCACAGGAA GTCGAATCAA ACCACGAACG CTACCAATTT      1320
     GCACTGAACT ATTCTAGAAG CTTAGGAGAA GGCCAGAAGG CTGAGAAAAA GCAAACTGAT      1380
     AGGGATTGGC ATACGAACGT TCATCAATAG GGCATAAACC CTCATTTTAG TAAACGGAAG      1440
     CCAGTGCCCA ACCCTGGCAA TCAGGCAAGT CAGACACGAC ACACATGATC AGTTAATGGA      1500
     CACTGACGTA TCAAAGAGAA CTATTAGAAC GGGTCAATAC CAACCCGGGC AGCCACCTTC      1560
     CTTGCATCAG GAAAGCGTAC CCTTACATCA AAACACTTGG CCGGCTCAGC AACAAAACAC      1620
     ACGGCAATAC AGGCAAACTA GCTATGATGC AACAAAAAGA CCCTATAGTG GAACTGGCTA      1680
     ACAGCACCAA AGCAAAAAAG AATTAACCAT CTAGCTTACG AAGAAGATTT AGCTGATACA      1740
     GAAAATTACG AACAGGAAGC AGAAGTGGCT GTGGAGGAAT GGGAGGACGA ACTTGCATTT      1800
     CATGATAGTG TTCATTTTTT AGACTTAAGT CCCTGTTACC ATTCATTGAA AGGAAAATTG      1860
     CAGGGAGAAC CATAAAACTC TTGATTGGCA CCGGGTCGTC GAAAAACTAC ATACAGCCTC      1920
     TTGCAGAACT AAAATATATA ATGCCGGTAC AAAAAGAATT TAAAGTAAAA TCGCTTCACG      1980
     GTTACAACAC AATAAAACTT AAATGCCTAG TTAAGATATT CGATAAAAAC GTTCCATTTT      2040
     TCATTCTTCC AGACCTCTCA AGCTTCGACG CCATAATAGG TCTTACCACA TTGACACAGA      2100
     CAAATGCAAT ATTGGACCTA AAAAATAAAA CTTTAAAAAC TGGTAATACA GTTTAACCAA      2160
     TTAAATTCAT AAGGTGTAAC AGCGTTAATT TCTCCGATAT TAAGGACATC ATCGTACCTA      2220
     AGCCAATTGC TGATAAATTT CACACTATGC TGGCAGACAG AGTGGGTGTC TTCGCAGAGC      2280
     CGGAAAAAGC ACTGCCTTAC AATACACATA TTGTTGCCAC CATACGTACC CAAGATAATC      2340
     AACCAATATA CACAAGACTT TACCCTTACC CCATGAGTGT GGCAGATTTT GTGAATAAGG      2400
     AGATGAAAGC ATTGTTAAAA GACGGCATAA TCCGACCCGC ACGATCACCA TATAATAGTC      2460
     CGGTTTGGGT AGTCGATAAA AAAGGCACAG ATGATCAGGG GTGTAGACAT AAAAGAATGG      2520
     TTATAGATTT TCGAAAGCTT AACTTTAAGA CCGTGGACGA CAAATATCCG ATACCAAATA      2580
     TAACATGCAT ACTGTCAAAT CTGGGGAAAG CCAGGTTTTT CAGCACGTTA GACCCTAAAT      2640
     CAGGATTCCA TCAAATCCTA CTCGCCGAAA AGGATAGAGA GAAAACAGCC TTTTAAATTG      2700
     CAAACGGCAA GTACGAGTTT TGCTGACTTC CCTTCGGCCT AAAAAATCCA CCTAGTATAC      2760
     TTCAACGTGC CATAGACGAT GTACTTAGGG ATGAAATAAG AAAGTCAATT ATTTTTTTAG      2820
     AACGACTAGA GGATCATGTG GATCATATTC GGTGGGAACT GGATAGATTA TTCGAAGCTA      2880
     ACAGAGAGTT TCTAGGAAAA AATCTCAATT TTTAAAGAAA GCGTCGAATA TTTAGGATTC      2940
     ATAGTATCTA GCGGGGGTAT TGAAACCAAT CCTTATAAGG CAGAGGCTAT TAAAACCTAT      3000
     TAAGAACCCA CAAATTTTTT CAACGTGAGA TCCTGTTTGG GACTAGCGAG TTATCGCAGT      3060
     TTTATAAAGG ACTTTGCATC TATAGCCAGA CCATTGAGTG ACATTCTTAA AGGCGAAAAT      3120
     GCCCAAGTTT CAGCCAGTCG CTCTAAGAAG ATTCAAGTTA GCCACGACAC TAAACAACGT      3180
     TCTGCCTTTG AAAAACTTAA GAATATCCTT ACATCCGAAA ACGTAATGCT GCTTTATCCA      3240
     GACTATAAAA AGCCCTTCGA CTTGACAACG GACGCCTCGG CACTGGGCCT CGGAGCGGTT      3300
     TTATCCCAAG GCGGCAAGCC TATTACAATG ATATCTAGGA CTTTAAAGGA TAGAGAGCTC      3360
     AGTTTCGCAA CAAACGAACA CGAACTCCTA GCTATAGAAA GAGAAAGAGT TCCTTAAAAA      3420
     GTTTAAGGAA CTATCTGTAT GACGTCAAAA ATCTGAACAT TCACACTGAT CACCAGCCGC      3480
     TAATTTTTGC CGTTTCAGAC AAAAACCCAA ACGCAGAAAT TAAAAGGTGG AAGGCGTTTA      3540
     TAGACGAACA TTTCTATAAA TGTCTCTAAC ATTTTCTATA AGGCAGGGAA GGAAAACTTC      3600
     GTTGCTGATG CACTATCTAG ACAAGCCATT CATGCTGTTG AAAGCGACGC TCGGTCAGAT      3660
     ATATCGACAA TTCATAGCGA AATTTCACTT TCATATACCA TTGAAACAGT CGACAAGCCA      3720
     GTCAATTGTT TCGGAAATCA GATAGTCTTA GAAGAAGGCA CAACATATTG TACTCGTACG      3780
     TTTGTTATAT TTAGAAATAA CTCGAGACAT TTGATACAAT TCGCAAACAG GGAAACTTTG      3840
     GTTGGCAGAA TCCGTGACGT GGTTAAACAG GATGTAACGA ATGCAATATA CTGCGAACTG      3900
     CCCGTATTGG CATTCATACA AAACAGACTT GTGGAAGAGT TTCCTAGAAC GACATTTCGA      3960
     CATACTAAAA AAATTGTCAA CGACATTTAT AACAAAGACG AACAAAGGGA AATAGTAACC      4020
     ATCGAGCATA GCAGAGCACA TAGGGCAGCA CAGGAGAATG TAAAACAGAT TTTACAAAAT      4080
     TATTTTTTTT CCCAAAATGT CACAGTTAGT AGCCAGTATT GTAAGCGACT GCTTAGTCTG      4140
     TACAAAAGCC AAATACGACC GTCATCCTCG AAAACAAGTC CTTGGGAAAA CACCTATTCC      4200
     CTCACTAATT GGCGAGACAT TACATATAAA TATTTTCTCC ACTGACAGAA AGTTCTCCAA      4260
     ATTCGCGATA GTGCAACCGA TAGGCTCTCG AACAATAGCT GATATAGAAC CTGCAATAAT      4320
     GCAGCTAATG AATTTCTATC CATGGGTAAA AACAATTTAT TGTGACAACG AACCATCTAT      4380
     GAACTCTCAA TCTATCAGGT CACTCTTACT AAACCGATTC AATGTAACAG TGGAGAATGC      4440
     ACCGCCACTC CATAGTATTT CCAATGGACA GGTGGAAAGG TTTCACAGCA AATTGGTAGA      4500
     GATAGCACGA TGTTTAAAAC TAGAAAGAGG CCTAGATGAT ACGGTCAACC TCTTACTCCA      4560
     GGCAGCCATT GAACATAATA AACGAACGAA CTGTCACTAA CAAAAGACCG ATCGACATTA      4620
     TTCATGCAAT GCCTCCCGAA CTTGCAGAAG AAATAACAAA TAGAATTGAC AAAGCACAGG      4680
     AGATACAGTT AAAAAGGATG AACGAATCAA GGTCTTTTTT TCAGGTTGGG AAAACGGTCT      4740
     TGGTAAAACA AAATAAACAC TTAGGAAATA AAATCACCCC ACGGTACAAG GAGGAAAAGA      4800
     TTGATGCAGA TATGGGAACT AATGTCCTTA TAAATGGAAG GGTAGTCCAT AAAGATAATC      4860
     TACGCTAGGT ATCTGTTGTT TAAATAAATA AGGATTTGGC AATTATTTAA TTAAATAAAT      4920
     CTTTGGCAAG TCTACTTCCC CAGAAGATAG AAAAGAATTC GAATCCAAAA ATTGGAAAAA      4980
     AACCTTTACC AGTATTTTTC AATAACAAAA AAAAAGAAAA AAAAAAACAA CAAACTTAAC      5040
     CAATTGGCAC TGTGCATAGT TTCTTAATAT ATTTATATTA TATCCAATTA TACTAGTCTT      5100
     TAATGTTTGT AATTTGTAAT GAATAAGGCA CGGTCATCGC TTTAGCCATT ATAAGAGGTA      5160
     GCCGGCAATG TTATCGTCAC CACACATAAA CCTTCTCAAG AAGTCTGTGG ACAGTCTTCG      5220
     TCTTAGAAGG GGAGGAGTTA ACACATTCAA CGAGCAGCAA AGAGAGGCCA ATGCAAGTAC      5280
     TGAAGCTTTC ACGATAAGAG GCGAGCTTTT GGCTTGGGAT CAAAGGCGAG CTTAAGAAAT      5340
     AAGGGAAGAG CGAATTGGAT CATCGAACGC GTCGGTCGTC GCCATGCAGA CACATATTAT      5400
     TCAATAAACT TACAAGCTCA AATATAATCC AAATATAATT CGTAGGCCAT AGACACGACA      5460
     TCCATAAAAA CACAAATCTA TTAACT                                           5486
//
ID   GYPSY8   standard; DNA; INV; 4955 BP.
XX
AC   AE003788;
XX
DR   FLYBASE; FBgn0067383; gypsy8.
XX
FT   source          AE003788:10579..15229
FT   SO_feature      five_prime_LTR ; SO:0000425:1..304
FT   SO_feature      three_prime_LTR ; SO:0000426:4652..4955
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   Repbase says the LTRs are divergent by 7%.
XX
SQ   Sequence 4955 BP; 1430 A; 1132 C; 1623 G; 770 T; 0 other;
     TGAGGAGTCT TAAAACTCCC CATAAATCTC GTGTAGGGGA GTGGCATAGC AACAGCCGCG        60
     GTGCAGGGTA AAGCGGAAAG ACCGTGAATT ACAGTACAGT ACTGGACCTT GAACTCCAGC       120
     GGGTCAAGGG CGAAGAGGTC GAACGGTAAC GGTGCGTGCA CAAAGAAGAC GGACGGTGAA       180
     CTAACGGTAT CGCTCTGAAA CTTGGAGCGG GCCAAGGGCA AATAGGTCGA ACGGTAACGG       240
     TGCGTGCGCA AAGAGGACGC ACCGTGAATT AAAGGCACAA TATGTGGACC TTGTACCCGG       300
     GCGGGCCGTG CGCAAAAAGG GAAATAACGG GATCCCTGCG GCCTATAAAA GGTAGGCGCT       360
     AGCACGGATG CGGGGCAGTC AGTGAGACAG CAAGATCGCG CGTGGAAGGA GATAGTGCGT       420
     CGAAGCGTTA CCAGTAGGAG TTCGGGAGTG AGAGCGCGCG GTCAAGTAAC AAACAGTGGA       480
     TGCGTCGGCG GCAAAAAGCC CGAAGGACAC GGAAGGAAGA TCACTACAAG CGAGTACAGA       540
     AGGTGCCAGG ATGACACCGC AGGCCCGTCG AGGAACGACA ACAACAGATG AGAACTGGAC       600
     CCGGTGCGGC GCGGTTTTGT GCCAAACCCA GCACAAGCCT GCCACAGATG CGGTGGCCAG       660
     GGCCACTGGT CTCAGGAGTG CAGGAACCGG CCGATTAATT TTTGCTGGAC CTGCGGGAGA       720
     ATCGGTCCAA GGACTTCGGA ATGCTGCCAC AGATCGGGAA ACGCCATGCG ACCCCAGCCT       780
     CAGAGGGGCA ACCAGGGTTC GCAAGAATTA ATGGCCAAAC TGAAGGCGGA AGAAAGGCAA       840
     CTGTCCGCCA CAGTGCTCAT AGACGGAGTA GAGATAAAAG CCACTGGCGG ACAGGTTGCA       900
     GGCGGCAGGA GAGGTCTTAC CTACGAGGAG AGAAGTGAGA ATGGCAGATG GACGGTACGA       960
     AGAAGTCACA TCGGTGATCG AAGTCAACAT AGGATTTGGC GAGAGGACCG TTCGGATGCA      1020
     ACTGCTGATC CTACACAACA TAATCGACGC ACTGGTATTG GGTTGGGATT TCCTAACGAG      1080
     AGTGGGAGCA CGTATGGAGT GCGCCGGACT GAGCGTAACA ATACCAGTTT GCTCAACGGG      1140
     ACAAAGCAGG CCAAGGGAAA AGCTTTCAGT GGCAGTCGTG GAGAGGGCTG ACTTCTCAGA      1200
     GAAGGACGTG GACGAATTCC TGAGGTCGGA GTTGACCAGT TTAGAAAACA TACAAGGGAC      1260
     GTCAACCGTG ACAGTGCACC GAATAACGAT GAAGGACGAT CAACCAGTCA AGCAGCGGTA      1320
     CTATCCGAAA AACCCCAAGA CTATGGGCTG GGCGCAGCCC TCACACAGCA TTCCGAGCGA      1380
     GGCGAGCGAG TAATCTCCTA CTCCAGTAGA ACGCTGAACG CAGCGGAAAG AAACTACTCT      1440
     GCAACGGAAA AGGAATGTTT AGCAATATTA TGGGTCGTCA GAAAGTTGAG ACCGTACCTG      1500
     GAGGGCCGAT GTCATCACGG ACCATATGGC TCTGAAGTGG CTGAATAGCA TTTAGAGTCC      1560
     GTCCGGCAGG ATAGCAAGGT GGGAGTTAGA GCTGCAACAG TACGATTTCG AAATCTCGTA      1620
     CAGAAAGGGC CAGTTGAACA TCGTCGCGGA CGCGCTTTCA AGACAACCTC TGCAGGAGAC      1680
     GAGCCGAAGA GTGAGCGTGG AGGACGACGA ACAATGGAGA GAGCAGCAGG GATGGAGGAG      1740
     ATGCAAAGAA AAGTGAAGCA GCAGCCGCAG AAATTTCCGG ACTATTTGGA GGAGGACGGC      1800
     AAGCTTCCGC ATCGGGCGGG CAACGAGGAT GTGGCATCGT GTAAGATGTG TGTACCAATC      1860
     GGTCAGAGGC AGTGCGTCAT GACCGAAAAC TACGACATCC AACTACGGGA CACTTGGGAA      1920
     GTAGCAAGAC GATTGCCAGG ATTGCAGCTC GTTTTTATTG GCCGGGAATG CATCGAGACA      1980
     TAAGAAAGTA CGTGCGAAAC TGCGAGAGAT GCATGAAGTA CAAACCCAGC CAGCTACAGG      2040
     CGGCCGAAGA AAAGGTTAAC ACAGGAGCCG GTAGAAGCAT GGGCAACCGT GTGCGCAGAT      2100
     TTCGTGGCCC CTTGCTGCGG TTGAAACACG GAAATGTTCG TGCAGTTCAC AAGTAGGGCG      2160
     TTCAGGAGGT TTCTGGATGA GCTGGGGGTG CGACACCAGC TCACGGCTCC ATATACTCCG      2220
     CAAGAGAACC CTACGGAAAG GGCCAACAGG ACCGTCAAAA CAATGATCGC TTAATTCACA      2280
     AGTGCCGATC AGAGGACATG GGACGAGCAG TGGCCGGAGC TGCAGCTGGC GGTTAACACA      2340
     AGTGTGGCGG ATCACAGGAT ACTCGCCGGC GTTCATAACA CAGGGAAGGG AGCCGAGTCT      2400
     GCCCAACGCG TTGTTTACGA AAAGACGACC GGGACCGGCA AGTGCACGCA GACACCAGCG      2460
     GAAAACGCGG AGAAATTGAA GGATATCTTC GAGATGGTGC GGAGAAACAT GGAGAGGGCG      2520
     GCACAGGATC AGGCACGCCA CTATAATCTC CGAAGACGAA GGTGGGGGAC ACAGCATGGG      2580
     CCAAAGAGCA CCACCTGTCA AAGGCAGCCG AAGGTTTCGA GGCAAAATTG GCCCCGAGAT      2640
     TTGACGGGCC GTACACAATA AAGAAGTTCA CATCACCAGT AATATGCGTC CTAGAACACA      2700
     ACACAACCAA AAAAGAAAAG ACGGCACACA TCAGCGATCT GAAGCCGGGA AGTGCGGGCG      2760
     CCGGCGTGCC AGGAGACTTC GAGGAATAAA CGGAAAAAAA AACACAAAAC GTTGGTGAGG      2820
     AAGGGGGGAA GACGATACAA GGTATCGATA CGGATCAGAA GTCAACATCA CACACACACA      2880
     CACACAGGCC CGTCAGAGCG CGAGAGCGGG ACAGGGAGGG TACGCAGCCA AGAACCGTTA      2940
     ACGGGTAACA CACACACTCA GCTGCGAATT CCGTGGGAGG CGAGTGTACG GACGAGAAAA      3000
     GCTCCGTTAC CGGTACGGGC CCACGGAATA ACGGCACAAG GAGCAGAAAG AAAACCGAGG      3060
     TTTCGTTGCG GAGAGTGCGG CTCGAGTCTG TCTTTTCAAA TTCGAGATCG TCATGGCAGC      3120
     ACACAGTTTT CACGGCCGGG GAGTACGAGA GACCGGCGCC GGGGAACAGC CCGGGGCGAT      3180
     ATGGGATTCC GATTCCTATC TCCAGCTCCT GGCGTCACCC CTGGTATCGC GATCTCCATC      3240
     CCCGGGGAGT GGGGAGGACC CGGAGGAAAT TCCGGACGTG GAACTTGAGG AAGACCAACC      3300
     GATGGCGGAT ACGGAGGGCG CGGCTGAGGT CATCACCCTC TCTTCGGAGA GTGAGGAACA      3360
     TGACGACGGA GGCGAAACGG TCACCCCGGA GTTGTCATCG GACGAGGATG AGACCGCGCG      3420
     GATGGCTTAC CGAAGCGTCC GGCGGGCTAC GCAGGGCCAG TCGTGCCGCC GACCGAGGAT      3480
     CCGGTGGACA TGAAGAGATT CATGGAGGAG CGAGTCGCCA CCCTGCGGCG ATTCCAGCAG      3540
     ATGGTGGATG AGCGAAAGGT CGCCGACGCC AAGGCCGAAT GGCAGGAGCG GTTGGCTTGG      3600
     CTGCAAGAGG AAGAAGCGTT GTGGGCACCA ACAGGGGAGA AGAGCCCGGG AGAAGCGAAC      3660
     CCGGAGAAGA GTGGAGCTGG CCCGCGCCAG ATGAGGCGCC GCCACCACCA AAGCCGCGCG      3720
     GCAAGGGGCG CGGGGGCGAA AGGTGCACTG GGCGAAGTTG TTAGAGCTTG GCGGGCTTCA      3780
     ATGTGCGGGG GGACGGAGAG GTAAAAGTCA CGATATCAGA ATAAAAGATA CCGGACGGCA      3840
     AAAAACAAAC CGTATGTCCG AGTTTGTCGT AAACGGGCAC TGGCACAATA ACTTAAACAA      3900
     AAAATGGTTG CGGGTGTCAT CTGCAGCAGC CGAATTAACG CGCGAGGGGG TGACGCGCGG      3960
     CCAGGCACGC AGGCCGGCAA ACGACGCGTG GCTGCTGCTG GCGCGGGACG AAGGAGGGGC      4020
     CGTTGCAGAT GCAAGCGATC CTCCGGGGCG CTCGGGGCCA GGGGCAGCCA CCCCAGAGCA      4080
     TGAAGGGGCA TACATGTGTT GGTGGAGCTG GAAAGAAGAG AGGATTCGTT AATATGGCGA      4140
     TACGCAAGAA AGCGTTAGAC TCACCTTTCA ATGAGCTGCT ACACCGGATC ACGTGTGAAA      4200
     AAGAATTGGG ATGGTGGCGT CGCGATAATG GCGACCGATC GATAGTGTGA TCGATAGAAA      4260
     TACTGGATGA GCACGGATGC GCAAATGCGG CCACACTGTG GGCAGCGATC CGCACGCGAT      4320
     GGCAGCGCCG GAATATCGGT AGTGACAACG CCGCTTACCG ATATCGATAA CACGAGTTCG      4380
     GCAATGTTGC CAGGCGGGAA AATTCAAATA TCGAACTGGT GGAGCAGAGC AGACAGCAGC      4440
     AGCACATGGA AGGTGAAAGA AGACCGCTAG GACAGAGGAG AACGGAGAAG GATATGTGAA      4500
     GGGTCAAGAT GCCCCGTCGA GATGGCTAAC GCCAAAGCTG AGACCAGAAG GATGTAGGAC      4560
     AACGAGCGGA GAAGTTGGAA GGAAGAGACA CCGGAGCGGA GGACCGTCGG GATCATTAAG      4620
     TTTTTAAAAT CTTCTGAAGA AAGGGGGAGA TTGAGGAGTC TTAAAACTCC CCATAAATCT      4680
     CGTGTAGGGG AGTGGCATAG CAACAGCCGC GGTGCAGGGT AAAGCGGAAA GACCGTGAAT      4740
     TACAGTACAG TACTGGACCT TGAACTCCAG CGGGTCAAGG GCGAAGAGGT CGAACGGTAA      4800
     CGGTGCGTGC ACAAAGAAGA CGGACGGTGA ACTAACGGTA TCGCTCTGAA ACTTGGAGCG      4860
     GGCCAAGGGC AAATAGGTCG AACGGTAACG GTGCGTGCGC AAAGAGGACG CACCGTGAAT      4920
     TAAAGGCACA ATATGTGGAC CTTGTACCCG GGCGG                                 4955
//
ID   GYPSY9   standard; DNA; INV; 5349 BP.
XX
AC   AE002591;
XX
DR   FLYBASE; FBgn0067382; gypsy9.
XX
FT   source          AE002591:<3717..>8393
FT   SO_feature      five_prime_LTR ; SO:0000425:1..336
FT   SO_feature      three_prime_LTR ; SO:0000426:5014..5349
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   Repbase says the LTRs are divergent by 6%.
XX
SQ   Sequence 5349 BP; 1992 A; 1135 C; 968 G; 1254 T; 0 other;
     AGTTATCATA AGTAAGATCA ATAATACTGG ACTTAATACT AAGTCAGTAT CCGGTCCGAA        60
     TCTACTACGA TAAATCAGCA GAATTTGCGG TTACTGTGAA TGGACACCCA CAGTGGGAAC       120
     CACAGTGGTG CAGCGTTAGC AGTCTGGACG TTTTGGCGTG AGGAGTCACG AGGCGCAACG       180
     TCGACAGAAA TAACGGCAGG TGTGCCGCTA TGAATATCTG AATGTGAAAT TGTACTTTAG       240
     TTTTAAACAG AACTCAAAAG TGATCAATCG TATTCTGATG CACTTCATAA AGATAAAAAT       300
     AATTATTATT AATAATAACT TAATAATTGT GTAATTGGCG CCCGAACGTA GTAAAAGTGA       360
     TCTGAAACCG GATCAAAAGA ACTCGCAACG GAAAATATTT AATTAAAGAA CAACAAACAA       420
     AATAACAGTG AAATCGTTTT ATATTAACAT ATAAAACAAA ACAACAACAA CGAAAAACTA       480
     AAAATTAAAA GCCCTAGTGC AACTACACTA AGCGAGTGAA AAACAAAAAC CACGGCCGGT       540
     TCATATGTAA CATATAAAAC GAAAACGTAC AACAACAACA AAAAATAAAA CCCCAGTGCA       600
     AATGCACTGA GTAAACGAAA TATATAAAAC GAAAAATACA TAACCGACAA AAGAAGAACA       660
     CAGGAGCGGA CCAGCACACA ACGGCACTAG AATAATAACG AAAAATGTAT GTGAGAAGTT       720
     CATTGCCTTT TCTTTCTAAA ACAAATTAAA TAAAAATTAT ATTTAAAAGT GATTATCTGT       780
     CGATTTATTG GCCTAGTGAG AGTAGTAGTA AACTAATATC AAAATTTTGT TCAGTACAAT       840
     AAAAGCCATT GTTTCTTGCA AACAAACACG AATGTATAGT AACTTGAATC GAAGTAATTC       900
     TAGTAGTGAC GAGGACACAA TACCTAGTTA GATGGAAAAA ATTAAAAACG AACAAGTTAC       960
     GATAATGAAT ATAGAACAGT GCACAACAGG AAACCTCGCA GCAACACAAG TTGCGTAGGT      1020
     TATCTGAATA TGGTAGAAAA TATGAATATG GTAGAAAAGC GGTCAAAGCC GCGCTTGAGC      1080
     ACCAATCGAC GGTTTTCGAA CAGAAATTAT CTGACACGAC ACATTATATG CTACGACAAA      1140
     TAGATACTAT TTCTATAAAA TCAGAAACTC CAAAGGTAGT AGTATACGAG GCAGCTAAAG      1200
     TAATACCAGG GATTACGTGT GACGAACCTT TAGATATCGT AAAGTCCATA CCAGAATTCG      1260
     ATGGCAAACA GGAAAATTAT GTTTCTTGGC GGCAAGCAGC AACGGTTGCT TACGAACTCT      1320
     TTAGACCATA TAATGGGAGT TCGAAGCATT ATCAGGCTGT TTCAATAATA CGCAACAAAG      1380
     TTAGAGGAAC TGCCAATTCA GCACTATCCT CATTTAGTAC GGTGTTGAAT TTCGACGCGA      1440
     TTATAGCGCG CCTAGACTTC ACATACGCAG ATAAAACCCC ACTGCGTGTT ATACAACAGG      1500
     AACTCGCAAC ACTGAGGCAG GGCTATATGC CCCTGCTCAA GTATTATGAC GAGATAGAAA      1560
     AGAAGCTAGC ACTTCTAACC AACAACGGAC CAAATAATCA ATCACAGGGT CAGAAGGCTG      1620
     GTAGTTTCAA ACAACGCCAC GCCCCCCCAA ATAATCAAGG CGTTGAGCCT ATGGAGGTTG      1680
     ATAGCTGAAC ACGCTATAGC CAACAGACCC AGTATAGAAG AAATAATGAC CAATCCATGC      1740
     GTAGCAGACA AATGCTGCAT CACACGTCCC TGGAATCACA GGGGATCAGA ATACGATTTG      1800
     TTAGCACAAT CAGAGGTATT AGCAACCGAT GACGATGACG CATCCGACGG CGAACAGTGC      1860
     AATTTTTTAG GGGAAACTCC CTGCTACCGT ACATTACAAG AACAGTAGCA GGGCATATTA      1920
     TAAACCTCCG GATAGATACG GGAGCATCAA AAAATTATAT AAAACCACTT CCCTTTCTGA      1980
     AAACCCTTAC ACCAGTTGAC AACCTGTTTC AAGTCAATTC TATACACGGG CATACCAAGA      2040
     TAGAGCAGAA ATACCTTATC TATTTATTTG GGACGAATAC TTGTTCGTCC TAAACAGTTA      2100
     AAAAAATTTC GACGGCATTA TAGGCCTCGA TTTATTAAGA AATGTTGATG CAACCATTAA      2160
     TCTTACGAGC AATTTAATTG CACACAAATT CGGCTCAGAG CCCCTACAAT TTATAAAGTA      2220
     TCAAAACGTG AACTTCATCA AAATTGACGA CAGTAACATT CCACTGGCGG TCAAAGAAAA      2280
     TTTTAACAAA ATGATCATGA CGAAAATGTC ACTAGAAAAA ACGTCTGGTT ATTGATTATA      2340
     GGAAACTAAA TCAAAAAATA ATAGACGACA AATACCCCAT ACATGCCATT TTCACCATAC      2400
     ATGGGTAGGG CTCAATATTT CACAACATTG GACCTTACTT CGGGTTTCCA CCCGATTGAA      2460
     CTAGCTGAAA GGGATCGAAA GAAAACAGAT TCAAAGAGAG GAGAACCTGG CATTCATTGT      2520
     GTCAAGTAAG GGATTAAAAA CTTCGCCTGA AAAAATTCAT ATAAAAATTT TTATGTCCAA      2580
     CCCCCAAATA CTCTATTCGG CCTAAGGTCC TTCTTAGGCT TATCCAGTTA CTACAGGTGT      2640
     TTCACTAAAG GCTTTGCAGC CATGGCCAGA CCTCCTACAG ATATGTTAAA AGGTGATAAC      2700
     GGAAAAGTAA GTACCAACCA ATCCAGGAGA GTTAGAATAA ACCTGAACCA AAGCCAACAA      2760
     CAAGCATTCG AAAAGTTGAA AAACGTCCTA GCATCAAAAG ATGTGCTCCT TATTTACCCA      2820
     AACTTCAACA GACCGTTTGA CCTCACAACT GATGCTTCGG CACATGGAGA CAAATGAGAC      2880
     AAACTTCGCG ACTAACGAAC GAGAACTTCT TGCGATAGTC TGGGCATTAA AAAACCTAAG      2940
     AAACTATCTG TACGGAGTCA AGAACCTTAA CATCTGCACC GACCACCAAC CGTTGACATT      3000
     CACGGTATCG GACAGAAACC CAAACGCAAA AATAAAACGC TGAAAGCTTT TATCGACGAA      3060
     CACAACGACA ATATCATTTA TACACCAGGC AAGGAAAATC GTGTAGCTGA TGCCTTGTCC      3120
     CGTCAAAATG TTAACGCGCT AGACAATCAC CCTGACTCGA ACGAATCCGA CAATGACTCC      3180
     AACATTGCTA CAATTCACAG CGAACAATCT CTTACATACT CAGTTGAGAC ATCCGACATC      3240
     CATCTGTTAA AACCTTTATA CTATTCAAGG ACAAGCACCG ACAATATAAT CCAATTTACA      3300
     GACCGAGAAA GTCTATGGCA CACTGTACTA GACTCAGTAA ATGCAAACGT TGTGAATGCC      3360
     ATACACTGCG AACTCCCAAT ACTAGCCTTC CTACAACACA GACTAATAGA AACATTCCCC      3420
     TCAACGACAT TCAGGTATTG TAAATACGTG GTAACGGACA TTACTGACAA GACAGAACAA      3480
     ACCGAAATAA TAACCACAGA ACATAACAGA GCACATCGCG TAGCCCAAGA AAACGTCAAG      3540
     CAGATATTGC GCGACTACTT CTTTTCGAAA ATGAGCCGCA CATTCTGTCA TCATCTTAAT      3600
     CTTAATTATT GCGATGGCGA TCGCTACAAC AAAAATAACT GACTACTCAC ATACGGACTA      3660
     TATACCAATT ATGGACGGAA ACGTAACGAT TTGGGACGAG TACTTAGGAC ACATGACAAA      3720
     CGTGACATCC TACGAGATAT ACGCAGACGA GACCAAAAGG ACTATTGACT TATTACAAAA      3780
     GGATCACATG AAAAGGATTC TTACTACAGA CCTCGGACAC ATTGACACGT TGATCGCTAC      3840
     AATAAGAGTA AAACATAGAA ATAAGAGTAG TATTAACCCG TTAGGGACCG CATTAAAAGT      3900
     AGTAGCCGGC ACACCAGATT TTGACGACTG GGAACAGATA AGGTTCCGGC AGGAACAATT      3960
     GTTAGAGTCA GAAAAAAGAC AGGTAGAAAT AAACTACAAA TTACAAAATC GATTGAACCT      4020
     TTTGACAAAA ACCTTAAACG ATATCAACAA AGCTGACGAA ATATACACCG AACATTTATT      4080
     TGAAACAATG CTAGCAAAAA ATAGAATACA AATAGAGTAA ACTAGTAATG TTTAGAAAAT      4140
     GGTTTGAAAA AATGGTAACT TCACTCACCT TGGCAAAAAT CCATTTGATC AACCCTGTCA      4200
     TTTTGGACGA TATTGATATA AAAGAAATTA ACAATGAACA ACTCACGAAT GCCAGCGTAG      4260
     CTGACATTCT AGAAGTAGCC AAAGCTAAAG TTTTCCAAAA CAATAATATG ATATATTTTT      4320
     TAATTACATT TCCAAACCCT GAGTTAGTCT GTAAAAAGAT CAAAATTTTC CCCGTTCAAC      4380
     ATAAAAATAC AATATTAAAC TTAGAAGACA GCAACATATT CGCAGATTGC GGCTCAAAAA      4440
     CCATTGCAAT AAACCAATGC GAAGCCACAG TGAGCACGAC ATTCTGCAAA ACAACAAGTA      4500
     CACCCACCTG TGCCGAACAA CTAACCGTCG CACAATGCGG CACCCGATCC AGCCACCTAA      4560
     ATCCAATAAC AGAGGTCGAC GAAGGTATCA TCATCATTAA TGACGCTGCC ATGAGAGTCA      4620
     CTGATCAAGA AGGCCTCAAC CGAACAATCA CGAGGTCTTA CCTCATAACC TACGTTGATC      4680
     GGGTCTCCCT AAATGGGACA TTGTTCATCA ACCAACCAAG TCTCTGAAAC AGAAGCCAGC      4740
     AGCATCCGTC GGGACTCAAA TCAATGTCAC GAGCCACAAA AATCACCACA GCCTGCCCTA      4800
     CCTCCATGAG CTAAGCTTGA AGAATCTCAT ATGTAGCTTA AAAGCTGAAG TATTGTCGAG      4860
     ACCGATCGTA AGCAGTGTCA TCACTTTCAC CATCTCACTC GCCTGTTTCG GCATTGTTTA      4920
     CATCGCCTAT CACTGGTTCA AACGATAACG CCTAATCGAA CCAGAGACAG CTCTGCAGAG      4980
     ACCCGAGGAC GGCCCTCACT TAACTAAGGG AGGAGTTATC ATAAGTAAGA TCAATAATAC      5040
     TGGACTTAAT ACTAAGTCAG TATCCGGTCC GAATCTACTA CGATAAATCA GCAGAATTTG      5100
     CGGTTACTGT GAATGGACAC CCACAGTGGG AACCACAGTG GTGCAGCGTT AGCAGTCTGG      5160
     ACGTTTTGGC GTGAGGAGTC ACGAGGCGCA ACGTCGACAG AAATAACGGC AGGTGTGCCG      5220
     CTATGAATAT CTGAATGTGA AATTGTACTT TAGTTTTAAA CAGAACTCAA AAGTGATCAA      5280
     TCGTATTCTG ATGCACTTCA TAAAGATAAA AATAATTATT ATTAATAATA ACTTAATAAT      5340
     TGTGTAATT                                                              5349
//
ID   GYPSY10   standard; DNA; INV; 6006 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0067387; gypsy10.
XX
FT   source          nnnnnnnn:1..6006
FT   SO_feature      five_prime_LTR ; SO:0000425:1..364
FT   SO_feature      three_prime_LTR ; SO:0000426:5643..6006
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   Repbase says the LTRs are divergent by 6%.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 6006 BP; 2113 A; 1283 C; 1203 G; 1405 T; 2 other;
     AGTTAACACG AGCAAGTCAG AGGGGTGCAA CGACCCGCCG AAATGCCATC CAAGACCGGA        60
     TGTGCCAACA ACAACATCGA CGACGCTGAA TCAGCCCAGT AACGCATTTC GCTTTAGCGA       120
     AAGCGATGTG CArGGGTCAG CGTGATGCGA GGCGGGCATG TGCGCGCTGG GTGACCGTCG       180
     AAGGCATGTA ACTCCAGACG GCACGAGGCG CCGACTAAGC GCTCTGCTAA GTCCGCTGCC       240
     TCCAACCGAA GACTTGGCGG CCTTAATAAA TTCGATTTGT AGTTAGTTCG TAACAGACCA       300
     GAATTCAGAG CAGTTGGCTC TAATAAAAGA ACCATTTAAT AATACAAACG TATTTGGTTT       360
     AATTGACGCC CAACGCGCTT AAGTGTCGTA ATAACGTAAA CTCCGTAATA AAAATATCTA       420
     AAAATCAAGG TCTCGTAACC GGGTTTTCTT TGAAAACGCT TCGGACTCGC ACGCTGCACA       480
     ACAACAGTGA ACATCAACAC ACAAACAAAA ATATCTAATG CAAAAGTAAA ACAACGCCGC       540
     ACAAGCAACA GTGAAAACCG CTGCATATCA ACAGTAAACA GCTAAAACGA CAGCCAGAGG       600
     ATAAACGGTC AACCAGCAAC CGTCTTCGCT GCATTTTAAT ATACCAATAT AACATGTAAG       660
     TGAGATCTTT ATTTTCAATT TACCTCTTTT AACGTCAACC AGATATGTGT GCCATTTTTG       720
     AAAAAAATAC AAAACTCATA ATAAATAACG AATAAAACAA ATAAAAAGAG TGAATACAAT       780
     TAAAACTTTA AGTATAGTGA TTTTAATTTA CAAATTGATT AGAAAAAAAA AAATGAAGAA       840
     TGAAAATTTA AGTCTTTCCT AAGAAGTAAT TCTTTCTCAT ACAAAGATAT CATTGTCCGA       900
     TGTATAGAAA TAGTATCGAA AACAACGACA GTGACGAGGA CTTAATACAG AGCTATAAAG       960
     ACATAAGAAA CAATAACCAA CATGGGGGTT ACATTGACGG TACTGAGACC GACGAAGATA      1020
     TAGAATTAAA AAACTTAATA GACGGCTTTA CAGACAGAGT AAAAATGGTT AACGATCAAG      1080
     AATTTCAAAA TCAACCTCAG GACCTTCAAC AAGAGGCAAC ACCAACACAG GAACAGGCGA      1140
     AAACCTCAGG TACCATTAGT AATAAAGATG TAATTAGACT CATGGAAGCG GCCGTAAATG      1200
     GTGCACTAGT GCACCAGCAT CAACAAAAAA TATTCTCAGA CAAGCTTAAA GAGGTTGAAA      1260
     ATAGGCAGAG AATAAACGAT GGTGGACCCT TAGTGGTATA CGAGCAAATA CCACATAATG      1320
     CTGCTATTCC TTGTAATGAA CCACTAGACT TGGTAAAGTC CATACCCAGT TTTGACGGAA      1380
     AACAAGATGA ATATGTGGTA TGAAGAACCG CAGCAGTTAA CGCCTACGAA ATCTACCATA      1440
     ATAATATAAT AATATATAAT AGCTAGAATG GGCTGCGCAT GTGCAGAACA AACTCCAATC      1500
     GAGGTGACGC AGCAGCAAAT GGTTACTATG CGTCAGGGAG ATCTTCCTCT AATGACTTTT      1560
     ATAATGAGAT TGAGAGAAAG CTAACTCTTA TTATTAGTAG GACTTTTTTG TCTTATGAGA      1620
     CAAATACTGC CGCTATCTTA AAAAATAGAT CACGGCAGGA CGCTTTGAAC GCTTTTGTGA      1680
     CCGGGCTAAA AAAATCAGTC CGAAATGTAG TTCTCTCAGC TGCGCCCAAA GATTTGCCAT      1740
     CAGCATTGGC CGTGGCTCAA CGGACAGAGT CCTGCAATGA ACGAGCCTGG TTCGTTGCAA      1800
     GCTTTAATAA AAATGTAGAA GAAAAATCTT ACAATTCAGA AAACCGTCGC CAAGGTAACC      1860
     GTTTTCATAA CACCCCACAA AGTAATAACC ACAACAACTC CCAGGGTGCT TTCCAGAGAA      1920
     ACTAAAACAA TAATCCACCG TGCACTAGTA ATCAAGCTAA TGGCTCTCAA TTTTCTAAAA      1980
     ACCAAAGATA AAAAGGCCAA GCGCATCAGA ACAATGAATC AAAAAATCTT CGATAAGGTT      2040
     ATACGCAAAA CCTAGGTCCT GAACCCATGG ACGTCGATCC CACATCACGT TCTAAATTCA      2100
     GGAGCGAACG GAGAGCTCGC AGTAGTCAAC GGTTGAACCA GAACAAGAGC AGTCAAATGA      2160
     CCAGGAGTAT AGGGTAAAGT CATCCTACGA AGCAGCGGAA ATCGAGGCTG ATAACACGTC      2220
     CGATTCCGAA TCATGTAATT TTTTAGGGGA CGTCCCTGCT CCCCCAAATA ATTCGTTCGA      2280
     TAGCGGGGCG AGAAATTAGG TTACTGTTGG ATACAGAAGC CTCCAAAAAT TACATAAAAC      2340
     CTCTAACAGA ATTAAAACAC TTCAAACCGG TGGAAACACC ATTTGAAGTC ACATCAATCC      2400
     ATGGTCATAC AAAAATAGAA CAAAAGTGTC TGATCCATCT ATTCAATGTT AAGTCATACT      2460
     TCTTCTTGTT AAACAACCTG AACGAATATG AAGGAATTGT TAGACTGGAT TTGCCAAAAA      2520
     AGGTCAATGC AAAAATTGAT CTAACAAAAA ACATCATCGA GCATGATCAT GGTACGGAGC      2580
     AAATTTTTTA CTCAAAATGC AGGAATGGTA ACTTTATTAA CATCGATGAC GTGGACGTGC      2640
     CGAAAGCCAT AAACGAAAAT TTCAAAAAGA TGATCAAAAA CAGATCAAAA GCCTTTGCGG      2700
     ACCCAAACGA TTCCCTCCCC TTCAAAATGA ATACGGTCGC CACGATCCGC ACTGACGGGG      2760
     AACCCGTATA TTCAAAACTT TACCCATATC CGATGGGTGT AGCCGATTTC GTCAATACGG      2820
     AGGTTAAGCA ACATCTAGCA GACGGAATAA TAAGGCCATC CCGGTCGCCT TACAATAACC      2880
     CAATTTGGGT TGTTGATAAG AAGGGTTTTG GCGGAGAAGG TCATAGGAAG AAACGTCTCG      2940
     TTATTAACTT CAGGAAACTG AATCAAAAAA CAATTGATGA CAAGTATCCT ATACCATTCA      3000
     TATCGACCAT ACTGTCGAAC TTTGGAAAAG CTCAGTACTT CACGACTCTT GATCTGAAGT      3060
     CGGGCTTCCA TCAAATTGAG CCCTCGGAGC GCTTTCGAGA AAAGACAGCT TTTTAGTAGT      3120
     ATGAATTCTG CAGACTTCCC TTTGCTTTAA AAAATGCGCC TAGTATTTTC CAATAGACGA      3180
     TGTTCTGAGA GAACACATCG GCAAAACTCG CTATGTCTAC GTCGATGACG TAATATTTTT      3240
     CTCCCAAACA ATGGAGAGTC ATGCCAACGA TATAAACACG GTTCTGAAAA CTTTGTGCGA      3300
     TGCAGGTATG AGAGTGTCTG TAGAAAAATC TATGTTCTTT AAAGAGAACG TAGAATATTT      3360
     GGGATTCATA GTGTCCCGAG GGGGAATTAA AACTTCACCC GAAAGGGTTA AGGCTATAAA      3420
     ACAATTTAAA CCTCCATCGA CATTGTTAAG TCTCAGGTCA TTTCTGGGAT TGGCCAGTTA      3480
     TTATATAATA GATGTTTCAT AAAGGGGCTT TTTAGCATCG CAAGACCTCT GACGAATATT      3540
     CTAAAAGGTG ACAACGGAAA AATTGGTGCT ACCACTCAAA GAAAGTCAAA CTGGAACGAG      3600
     CAGCGAAAAT CATTCGAAAA ACTAAGAAAC ACCCTGGAGT CTGAGGATGT CATTTTGGCA      3660
     TACCCAGATT CCACTCAGCC ATTTGACTTG AAAACTGACG CCTCTGGAAG CGGCCTAGGG      3720
     GCTGTTCTTT TACAGATTTA ATCGGCAGCG GCAGAAATCA CCGCAAATTG CAGAACGTGT      3780
     TCCGAAGCAA AACACCAATC GTCACCCAGT GCAACAAACC ATAGCGGAAA CATCAATTCC      3840
     TGGTTACACT GGGGAAAGTA TCCACATAGA TATATTTTGG ACTGATCAAA AGCATTTTCT      3900
     AACCTGTATC GACAAGTTTT CAAAATCCGC TATAGTCCAA CCAATCGATT CAAGAGCAAT      3960
     CGTAGATATC AAAACTCCGA TACTACAACT AATAAATCTG TTCACCAAAA TAAAAACAGT      4020
     TTACTGCGAC AATGAAAGAT CTATCAATTC ACAAACCATA CGAACCATCC TAGAAAATAG      4080
     GTATGGTATA CGGGTCTCAA ATGCGCACCC GTTGCACAGC ACATCTAATG GCCAAGTTGA      4140
     GAGATTTCAT AGCACCCTAG GGGAAATCGC ACGGTGCATC AAGATAGATC AAAACATAAC      4200
     CGAGACGAGC GACCTTATTC TATTCGGAAC AATAGAATAG GACAGAACTG TCCACTCGGT      4260
     TACAATTAAA AAGGGTCATG AAATAGTTCA CGCTATTCCA CCAGATTTTA CGAGCACCAT      4320
     AAGAGACAAA ATCAAAGAGG CCCAAGAGAA AACACTTAGG TACTCAAATG CACACAAATG      4380
     CAATAAACAG TACCAAATAG GCGAAAAAAT CTGGTTAAAA AACCAACAGA CGCCTGGGTA      4440
     CCAAATTAAC GCCACTCTGC TCAGAAGAGG TCATCGAGGC TGATCTCGGC ACGACAGTGC      4500
     TTATTATGGA GCAACGAACA TTACATCGTA CGAGACTTAC GCGGACGAGA CGAAACACGC      4560
     GATGGATTTC TTCGAGAAGG AGCACATGAG ACGGGTACTT GAAACGGACT AGGAACGAAT      4620
     AGAGACTCTT CTGGACACAC TAAAGGTACG TCACAGACAT GCCCGTAGTC TTAATTTCTC      4680
     TTAATTTTCT CTTAATTTCT CTTAATTTGC TTTGAAAGCA ATAGAGTGGA CACCTGACTC      4740
     TGACGGCTGA GACCAGGTGA GGTTTTGACA GGAACAGCTA ACGGACTCGG TAAACGGACA      4800
     GATAGATTTA AACAACAAAA TACAATTGCA ATTAAACACA ATGACCTCGT CCATGAATTC      4860
     TATTTTAAAA TCGGACGACT TAGACACAGA ACATTTGTAC GAGACGATTT TGGCAAAAAA      4920
     CCGTATTGTA ATTCAAGAAC TTGAAAATTT AATACTTGCA ATCACCCTTT CCAAATTAAA      4980
     CGTAATAAGT CCAATAATCT TGAATGACGT TGACGTAAGG GAGATTGAAA AAACTTTTCA      5040
     AAATCGAGAC CTATTGTACT TTTTAATAAA ATTTCCGAAG CCTTTGTTAA CTTGTAGAAA      5100
     AATAAGAATA TTCCCGGTAC AGCATGAAAA TAGAATCTTA GATTTCGAGG ACGGTAGCAC      5160
     GGTCGCGGAT TGCGGGACGG AAACCTTCGC CGTCAAGGAC TGCAATGTAT CACCACCTTC      5220
     TGCAGGAGAT CGAAAGCGCC AACCTGCGCA CAACAACTCA TCTCTGGCAT GGTCGCCCAC      5280
     TGCAACACCC AGCCTGGACA CTTGGACCCA CTCACCATGA TCGACTAGGG AATGCTCATC      5340
     ACGAACGATG TAACGATAAA TATCACCGAC GAAAAGGGAA TAAGCCGGAT AATATCAGGA      5400
     ACTTACCCGG TATGATATAC CGAAAAAATT AAAATAAACG GCACCCTTTT ACGTTAACAA      5460
     TATCGGAACA TCAAAGAAGA AAGCCGCAGT TTCAGCTATG GCCCAAGTAA ACGTTCTGAG      5520
     ACATATAGAG CGCCTTACTC TGTCCTGGAA AGAAAGATGA TGATCTTTCT TATCTACCGT      5580
     TTGAAAGCCA AACCAACTAA GACCATTGAA TCCGAGGACG AATTCATCTT AAGACAAGGA      5640
     GGAGTTAACA CGAGCAAGTC AGAGGGGTGC AACGACCCGC CGAAATGCCA TCCAAGACCG      5700
     GATGTGCCAA CAACAACATC GACGACGCTG AATCAGCCCA GTAACGCATT TCGCTTTAGC      5760
     GAAAGCGATG TGCArGGGTC AGCGTGATGC GAGGCGGGCA TGTGCGCGCT GGGTGACCGT      5820
     CGAAGGCATG TAACTCCAGA CGGCACGAGG CGCCGACTAA GCGCTCTGCT AAGTCCGCTG      5880
     CCTCCAACCG AAGACTTGGC GGCCTTAATA AATTCGATTT GTAGTTAGTT CGTAACAGAC      5940
     CAGAATTCAG AGCAGTTGGC TCTAATAAAA GAACCATTTA ATAATACAAA CGTATTTGGT      6000
     TTAATT                                                                 6006
//
ID   GYPSY11   standard; DNA; INV; 4428 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0067386; gypsy11.
XX
FT   source          nnnnnnnn:1..4428
FT   SO_feature      five_prime_LTR ; SO:0000425:1..452
FT   SO_feature      three_prime_LTR ; SO:0000426:3977..4428
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   Repbase says the LTRs are divergent by 6%.
CC   REPBASE states this to be a consensus sequence.
XX
SQ   Sequence 4428 BP; 1783 A; 786 C; 737 G; 1120 T; 2 other;
     TGTGGTATGC GTACATATAT ATTTAGAGTA CATATATACA TAGAGTACAA TGTACTCAGA        60
     ATACTTACAT AAATCACTAA CATAATTACA TACGCATTGG CAGTGCTAGC ATAAACAATA       120
     ATGTTCAAGT GGAAGTGTTA TATGATCGCC CACTTATGAA GCACACTGCA TAAGTGCATG       180
     GTCAGCATTC CCACGCTAAC CAAATGCCGC TATGTACATA ATGTGCGCAC ATAGCATTTT       240
     CTCTCAACTC TCTTAACATA ArTATATAAT ATAATATATA ACAGCCGCTT CTCTGCCGAC       300
     TTCACCAGGC AGCGAAGGCG CACTTCATAG CCTAAGAGGA ATATTGTATT AGCTTTAAGA       360
     GTCAGTCGAG TTTTACAACT GATACGAGCT TCACGATAAA AATAAACGGA GCTATGCTCC       420
     AGAAAAACAT CTAAAGGATT TTCAATATAA CATGGCGACC GTGACAGGAC AGGGACCTAA       480
     GGCCTAAGGA CATAGGGCCT AAGGACTACA ATCACAATCA ACACAAAATT TGTATTGGAC       540
     TGGACTGGAA AGGCAGATGG AAGACAAAAT TCTCAGTGAG TAGAGTAAGG CAATGAGAAA       600
     AAAGCCCGGC GGTGGGCGGC AAAAGTTAAA ACCGAGAATA GCTCACCTAA GGTGGCTATT       660
     ATATTCTCAA GCAGAGCTTG ACTTCCTACA ACAAGAATTA ACAAAAGCGC CAATAAAAAC       720
     CAAAAGCCAA ACTCTTTCAT TCATCAAAAC CACAAATAAT ACAAAAATTA AAACTGTAAC       780
     ACCACCACCC AAAGCCAGCA TACCAGTTTA CAAGGAACAA TGCCCGTTGG ACTTCGAGGG       840
     ACAATGGAGA GCCTATTGCA AATACACTTG CAAACATTGT AAGGACATCA ACCAGCAGAA       900
     GGAGACCTGT GCGACAAACA GCACCGGCAC CGCTTAACGC GTCAAGTTAA GCCAGTAAGG       960
     GCACCTCTAA CCACCAACAG CAGCAGCAGT ATCAGCAGCA ACAACAGCAG CTTGGGCAGC      1020
     CAGCACCAGC ACCGTATGGA AAGGAAAAGG AAACCGACAG CGCTTCCGAG AGCGCAATTT      1080
     TTTTTTTCTC AATAGCACTG CGTTGCAAAA ATTTTTTTTA ATGCACTACG ATGCATATTT      1140
     TATTTATATA GCCTATAAAG CTATACACAT CCAACAGGCA GGAACATATG TAAAAATTAT      1200
     AAGCAAACAT TTTTTACATA TACATTTTAG CAAAGAAATA ATAAACCTAA AATTCAAAAA      1260
     TAAAGATACA AATATTAGAA AAATGTTTAA CGTAAATGTC AATAGTGACA AACAAAATAT      1320
     ATAAAGAATA AATTTATGAA AATACTGAAG AGATCTTAAA ACCCAATATG GGCTTAGTTG      1380
     ATACAAAAAC AGAACCCACA TTTTTTTCAA ATGCAAAATG CCACAAACAA AGTGGAGATA      1440
     GAGTCAAACA ATTTAAGCTA TATAACAATA ATCTTGTTAG CAATTTTTAC TAATGATCAT      1500
     ACATGCACTC ATAAAAGTGT ATAAACTCCA CAATAAATGC CTGAAGAAAC GATATAATAG      1560
     CATGGCCGAT AGCCTAGAAA CAATTTAATT TTTAAATAAT GAGCTCATTA ATGAAAGAAA      1620
     AATAATAATA AAATCTAAAA AAAATTTTTT TTAAATACTA TTATGTATTA TGTATAATCC      1680
     GAATTATGGA TTGGCAAAAC TTAACAGCCA TCTTAAATAA AATAAAAGAA AAATTTGATA      1740
     GGTCACATAA AAGTTTGTCT CAGAATAGAA CAATCCAAAA ACAAACTGCT AATGACCATA      1800
     CAACCTTTCT GGTAGAATCC TTCAATCAGG TAAGATCCCT TATACATGAC CAAAGAGGGA      1860
     AACTAGACAA AAAACAGTGG ACAACAGTGT CCAAATTTTT AATTAGACAA GAAATACTAT      1920
     CCCTATTGTA ATAAATAGCA AAGAAAGGGT TCGATCTAAA CATATCGATA CCAACAATTC      1980
     TAAATTCCCC TTTAACTCTA AGTGAAGAAG AAACAGAATA ACTCAATGAT TCTGACTCTG      2040
     AACTAGAAAT CAAAGAAGAA GACTTGAACG ATCTAACAAT ACCAGCAATG TTGCAATTGC      2100
     CAGAAGATTA AAAGAATATA GAAGATCAGA AAATAAAATT AAGCAAAATG ACAGACAATT      2160
     CAGCCGCCAT TAGGGTCTAC ATAAGGGAAG TGTGGAGCGC AGTACCGGAG TTTGATGGAC      2220
     AAAAGATCCA TCTTCAGAGG TTTATTGTGG TCATCAAATT AGCAGACCTT GCAAAAGGAT      2280
     AATTTAAGGA CATTGCAGTC CAAGTAATAA AATCAAAATT GATTGGCACT ACTCTAAACC      2340
     TGGTACTGAG CGAATCTACA ATTGAAGCAA TAATTAACAA ACTGCACACT TCAATTGTTG      2400
     GGGAGACATC CCAAAACATC AAGGCAAAAT TATCCACTGT ACAACAAACA AAAAGGCAAA      2460
     ACAGCTACAC AGTTCACAAC CGAAGTTGAT AATTTACGTG AGCTCTTAGA AGCCTCGTAT      2520
     ATCGATGAAG GTTTACAAAG TGAGCAAGCC ATCGATGTTA TGATCAAAAA GACCAAACAC      2580
     GAAAGTGTGA AAACTGTGCT AGAAGCAGGT ACGTGCACAA CTATGGATGA TGCCATAGGT      2640
     GCATAAAAAC TAGCACCAGA GTAACCGGAA ATGTGAATCA TTTAATGTAA GAGAGGTTAC      2700
     TCTAACTCTA GAGGCCAAGG TAATGGTCGC GGCAGAGGCA ATGGCCATTA CAATAGTCGA      2760
     TACAATAACA ATAATAACAA TTACGGCGAT AACGGTATCC AAAAGAATGG TAACAATTAT      2820
     AGATGCCGTG GCAACTCAAA GAGAGGAAGC CGAAACAATC AGAATTGAAA TAATAACAAT      2880
     AACAATGATA ATGCTAGTGT GAGAGTAACC CAAAATAATT CGGGAAACTC GAAAAAAGCC      2940
     TCAGATGCAC GGCAATAAAG CTCATGTACA TTTAATCAAT CTAAGTATTA ATATATTGCA      3000
     TTTGATCATG TGCATTTGCA TTTGACCCAA TTCGACAGAG TGATAGTGGA CACTATAGGT      3060
     CCTCTACCAA AGTCGGAAAA TGGCAACGAA TATGCAGTCA CTCTCATTTG TGACTTAACT      3120
     AAATATTTAG TTGCGATTCC CATACCAAAC AAATGCGCAA CAGCAGTCGC TAAAGCAATT      3180
     TTCGAATCTT TTATTCTTAC TTATGGTCCA ATGAAGACGT TCATTACGGA CATGGGGTAC      3240
     ATAATATAAG AATTCAATCA TTACAGATCT TTTCAAATAT CTAAAAATTA AAAATATAAC      3300
     GTCTACCGCT CACCATCAAA CAGTAGGTGT AGTCGAAGGA AGTCATAGAA CTCTAAATGA      3360
     ATACATACGA TCTTACATAT CGGTTGATAA AACTGATTGG GATGTATGGA TTCATTATTT      3420
     CGTCTATTGT TTTAATAGAA CCCCTTCTAT GGTACAAAAT TATTGTCCAT ATGAACTTGT      3480
     TTTTGGTAGA ACAAATAATT TACCCAAAAA TTTTACTAAT ATAACTAGCA TAGAACCAAT      3540
     ATACAATATA GATGATTATG CTAAGGGAAA GTAAATATAG ATTAGAAGTA GCATATAAAA      3600
     GAGCTAGAAC TATGCTTGAA AAGCATTGAA AAAATAAGGA AAATTATGAT TTACAAACAC      3660
     AAAATATAGA AAAAACAGTA GGATATAAAG TTCTATTAAG AAATGAAGTA GGTCGTAAAT      3720
     TAGATTTTAA ATATACGGGA CCCTATACGG TAGAAAATAT AGAAGAAAGA GACAACATAA      3780
     CAATATCAAA CAATAAAAAT TAAAAACAAA TATTACATAA AGATCGATTA AAAGTTTTTT      3840
     ATTCATAAAT GACGTCATGA TTTAATACAA AAAGCATTAT AATAATGGAA AAATACAATT      3900
     TAAAATGTCA AAAACAAAAA ATATATATAT ATAAAAAAAA AAACAACAAA ATAATTATTT      3960
     TTTAAAAGGA GGGAGATGTG GTATGCGTAC ATATATATTT AGAGTACATA TATACATAGA      4020
     GTACAATGTA CTCAGAATAC TTACATAAAT CACTAACATA ATTACATACG CATTGGCAGT      4080
     GCTAGCATAA ACAATAATGT TCAAGTGGAA GTGTTATATG ATCGCCCACT TATGAAGCAC      4140
     ACTGCATAAG TGCATGGTCA GCATTCCCAC GCTAACCAAA TGCCGCTATG TACATAATGT      4200
     GCGCACATAG CATTTTCTCT CAACTCTCTT AACATAArTA TATAATATAA TATATAACAG      4260
     CCGCTTCTCT GCCGACTTCA CCAGGCAGCG AAGGCGCACT TCATAGCCTA AGAGGAATAT      4320
     TGTATTAGCT TTAAGAGTCA GTCGAGTTTT ACAACTGATA CGAGCTTCAC GATAAAAATA      4380
     AACGGAGCTA TGCTCCAGAA AAACATCTAA AGGATTTTCA ATATAACA                   4428
//
ID   GYPSY12   standard; DNA; INV; 10218 BP.
XX
AC   AE003789;
XX
DR   FLYBASE; FBgn0067385; gypsy12.
XX
FT   source          AE003789:>46854..38973
FT   SO_feature      five_prime_LTR ; SO:0000425:1..2336
FT   SO_feature      three_prime_LTR ; SO:0000426:7883..10218
FT   SO_feature      CDS ; SO:0000316:3141..4553
FT                   /db_xref="FLYBASE:; gypsy12\gag"
FT                   /db_xref=""
FT                   /protein_id=""
FT                   /translation="MGLDRSPTRKSPSVSNPVCKLCAAEISTQDLYVTTCHHEFYRECI
FT                   GNHFKKSEICSRCKLTCRPPAEATERVGRETRSKTKNRRNSRRGSFDISQRCGEKLAVK
FT                   LKIAATVDGGPSTSASGANANEASSSAVSANAALLAMERRLLATLSEKMADLVQNAITS
FT                   SMQRIMPTPSPAVVVTASEMSADHPNAYERQYLASPNPVPSPRSASSDLFDRPDKVVHI
FT                   LNGWKIKYSGVGVSVDNFIYRVEAVTRQTLNGNFNLLCRNISVLFEGKANDFFWRYHKF
FT                   DRVATMGTERFCTALRLQFRQSRDDGDIEELIRNTKQKPNETFDSFYDTVSELVDQLEQ
FT                   PWTANKLVRVLRNNLRPEIRHEILNLDVRTVSELREICKRREAFLADVRRCSSYAKDTP
FT                   FKREISEVCHESEDEVRSTYEAENDIESFSLVCWNCRIEGHRYQECIAERRVFCYGCGA
FT                   ANTYKPSCRKCSKNFKVGMSKLPVKPKTSNAARNQSTMTDQ"
FT   SO_feature      CDS ; SO:0000316:4740..7710
FT                   /db_xref="FLYBASE:; gypsy12\pol"
FT                   /db_xref=""
FT                   /protein_id=""
FT                   /translation="KKCKASLDYISSIPTGPRDPRPFLPMRLLNCLVYGLLDSGASISC
FT                   IGGGVVQAAMENEKFKSLIGEAATADGNSQRIVGLLKIEVEYGDIKKLLKLYVVPSLKQ
FT                   DLYLGIDFWKLYDLLPANLKIAEILSPEPNQQTVVDQHELCEGDKAKLANVINCFPSFS
FT                   QEGLGKTNLVSHSIDVGTARPVKQRHFPVSPAVEKAMYAEIDRMLRLGVIGESESAWSS
FT                   PIVMVTKPGKVRICLECRKVNSFTEMDAYPLPQINGILSRLPRAEYISSLDLKDAYWQV
FT                   PLDPKSRDKTAFTVPGRPLYQFKVMPFGLCNATSTMSRLMDKVVPAHLRNEVFIYLDDL
FT                   LIVSSCFESHLNVLRELALQIKRAGLTLNVAKSHFCMRRVRYLGHIIGDGGIRTDPEKV
FT                   SAITDFPLPKSLKSLRSFMGLCGWYRKFVANFATLSAPLTDLMTTKRKFLLTKEAIEAF
FT                   SKLKECLSKAPVLCSPDFAKPFAIHCDASKSGVGAVLVQVSEEGDERPIAFVSKKLNKA
FT                   QRNYTVTEQECLAAIVALKNFRAYVEGLPFKIITDHASLKWLMSNHDLNSRLARWALAL
FT                   QRFKFEIEHRKGSLNVVPDTLSRVNEEIVAAMDLQEDLIVDFDSEFFQSGDYVKLVETV
FT                   KENTSNFSDLKVESGFLYRKAEHLTGERMHDEYAWKLWVPKELVSKILARAHDSPLAAH
FT                   GGIHKTLERIRRYYFWPGLVSDVRAYISACEVCKSTKSQNFTLRPPLGKAPESQRFFQR
FT                   LFIDFLGPYPRSRSGNIGIFIVLDHFSKYVFLKPVKKIDSSVVIKYLEDELFMTFGVPE
FT                   VILSDNGSQFRARTFQRLIRYGVKHTLTAVHSPQANASERVNRSVIAAIRAYLRLDQKD
FT                   WDEFLSRICCALRSAVHSSIGTSPYYMVFGQHMITSGSTYSLIRRLNLLDDRSLKFDRH
FT                   ESFEIMRKQAVDQMRNKHNENEKRCNIRSRVVSFVEGQEVYREISSQAVSKPVTTPSLD
FT                   RRS"
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
CC   Repbase says the LTRs are divergent by 1%.
CC   Repbase says that the translations are 'conceptual', based on alignments
CC   with similar proteins.
XX
SQ   Sequence 10218 BP; 3033 A; 1995 C; 2287 G; 2903 T; 0 other;
     TGTAGAGGCG ACTGAAGCAG TGGGTGAGAA AAATCTCGAT GAATAATCGA TAGGGCGGTC        60
     AGCTGTGACA CACTAAAGTG AGGTCTTACT AGATGTAGCA AGAAGTAGCT AGAATATACC       120
     AGACTGGATG CAACCCTTAT TAGCTGCACC CGATAAGTTT GGTATAATTC GGTTATCGGA       180
     GAAAATGTGT TGTTCAGCTG ATCGTGGTTT CCGCCGATGG CCTACGCCTC GACTAATGTT       240
     TCCGGTTTGC CTTCTTTTCG ATCTGAACAG TCAACGCGTC AAGTTGCGAA AGTGCGTCGA       300
     AAAATTTGAA CTTGCGGTCA TACGGAATTT TTTTGTCGCG CGAAATATCG AAAATACGGC       360
     GTTCCTTCGC CTATAGTGAT GCGCGAAATA ATTCCGGCTT GTGTTTCCCG GCGATATTCA       420
     GCCGAAGAGA TCGGCGTTCG TCACGGCCAT CTCACTGCCG CCTTGCCGCC AAATCCTAGC       480
     TTCGACTGGG TCAAAGTGCA GGTTAGTGAG TTTCGAAATA TTGGTGAACC GTAGTTTGAT       540
     ACGGGAATAT AATCGCAGCA GTTTTCGCTG GACATCTTAT ACTTTCGCAT CACTGCCCGG       600
     GTCCTACGAT TTTTCGGAGC CGCCACCGGC GGGCAGAAGG AGAGACGGCA ACTGCGCCAG       660
     GCGAGTAGTG GAGCGCCTTT CCAGCAAGCC GGAGCGAAGG ACCAGCCGCA GCAGCAGGAC       720
     AGCGACCGCC CTAAGTCGGG GCCACCAGGA GGGATCTTTA AACAAATAAA AATGCAGCCT       780
     AAGTAGAGCT TAGAGTGAGG TTAGAGTGAA TGGAAAATTT TCTTTTTGCT TGATTGGCAG       840
     TCCAGAATGC CCGAAATTAA ATTAAATCAA AGTTAAATCG AGCAAAATTT CTAATTATAC       900
     AAAAAAATGC TGAAAGCCAG ACCTAACCTT ACTAGAGAGT ATTAATTCAA CCTGATCGCC       960
     ATCTTGGACA TAGAGTGGCA GAAATTAAAA TTTTTCCTAT GTAGTTTAAG TTTAACGTTA      1020
     AGCTATAAGA ATATGTACTC GAATAGGAAA CTCGGTCATA CTGTTTAATA ATTTTTCTTG      1080
     GATTTAAAAA AAATGAATTC TTATTAGTGA TTAAAATTTT TATATAGTAA GTGATTTAAC      1140
     CTAAGCTAAT TAATTGTTTT AGAAGAGTTC TCTTTCGAAA AGTGCTCATT TAAATTTTCG      1200
     AGTAGGGATT TATAAAAGTT TGATCGCAGT CGTGTAATCC AAAATTATGC CTCCTTATAG      1260
     TGTTTGTGGA AAAAAAAGCC ACCTTTTCGT TTCAGCTCAT CTGCGCCGGG AGATCGATCT      1320
     TTCGCCGAGG AGTGAAAAGT TGAGTGAGTC TCATTGATAA AACTTTATTT TATTGGAAAT      1380
     TCGGTAGTAA ACCGATTACA TTTTGATAGA GGTCATCTTA TATTGTATAC ACACTGCAAA      1440
     TAAAAAAAGT AATAATAATG GAGTGGCGAG AGCAGCCATT TGAAATATAA TGAGAAAAAG      1500
     ACAAAAAAAT GAAAAAAAGA TCTAACCGAA TTTACTCGCG GCTCTCTCTC AAACAGAATT      1560
     AAATTTTTTT TCGTTAAAGA TTCGTTATAA AGAAAACTCA AAGAAAATAA ATAAAATTAA      1620
     TAATTCACAG AACGAGATTA TAGAGAGAAC GAAAATTATT AATGATTTAA ATGAAAGCTT      1680
     TGTTCCTTCC CAAAAAAAAA AAAATATATA TATTTATACA CTAGTATTTT TAACTTTTAA      1740
     TTGTAATGAT CTCGAACATC GAATTGAATC TACATTTTCT GATCTCGCAA CTGAGAGAAA      1800
     AACTTTGCTT TGAATTCCTT TGAGTTACAC TAGTCTGTAT TTTTTATATT TACTTGGTTC      1860
     CTTTAGTATG TACTTATTTT TAGATATAAA TATTGTTATT AATTATTAAG CATTGATTGA      1920
     TTTTAAAAAT ATGAATTTCT AAAAACCTAA ATGCTGACTC GGCTGATGTT TCTCCTGACG      1980
     TAGGGCACTA AAGGGGCCGC TAGAGCTATG CTCTTAAGGA AAGTGGTCTA AGGTAGGGTA      2040
     GCGCAATGCG CGAACACGAT TCCACCTGTG TTTCGCAGGC GAAAAATTCT CAAACTTTCC      2100
     TCCCATTCTA GAACTGTCCG CTTCCGAAAG TATTAATTGG CTTCCTCCGA TTTTTGTATT      2160
     CTAGCTCCTT CATTTTGTTG TTGTTGCAAG CACGCTCAAT TTCTTGATCT TATTAATTGT      2220
     TGTCTGTAAC GAAAAGAGAT CTGTACAAGC AAGACCACCA CACCCGGCCT CTAAAGCGTG      2280
     CACCCGCAAG TACAGGTACT CCAGTCGTCC ATCCGTTTAA TTCGTTACAC GTTACAGTTT      2340
     AGTTAAGTAT AATAATAAAT AAGATAAAGT GGCGCCCAAC GTGGGGCCTT AGTGAGTTAT      2400
     TTTAAAATTC ATTAAGACTC GCGAATTAAT ATCTTCAATC CTTTCTTTAC ATTTTCTGTC      2460
     TCACTTCCAA AAATTTTTGT GTTTAGAATT GGTTGCGGAG TACACGTCAA GTCCATACTA      2520
     ATATTGCTAA CTGGCCATAA CTAAGACTGA TCACAAAAAT TTTCCTAAGT GTAGCAAAAG      2580
     GAAATGTGGA TTTTGCTGAG GAAAACAGAG TAACAGTAAC TTCGGTCAGG TTTCTGTCCC      2640
     GGTTTTATCT ACTTCCTTGA GCTAACTAAA TGCTATTCTA AAAAAAAGAT CATTAACGCA      2700
     ACATGACGGA AAATCTTTGC GTTACTTAAG AGAAATGCAA GATCCTCATA TAGTTGACGA      2760
     TTTTCCTCTT TTTACTATTC GTTTTAAATA AGATAGAGTT TCCTATAAGT TGGAATATTC      2820
     GTGCCAAGGA AAAGGCACGA TCCAGGACTT CACTGTTACA CCTACTGGTG GTGTTGAAAT      2880
     TTAGTCTAAT ATGGAATATC TTATTTTAAC GAAACTCCTA TGCCTTCGTG AGAATTTTGA      2940
     GTCTAATATA GAATATCTTA TTTTAACGAA ACTCCTATGC CTTCGTGAGA ATTTTGAGCC      3000
     AAAATAATAG ACAGCCCTAC GAAAGGAGAA CATCAAGTTC AGTTTTATTA TCTTTTCGCG      3060
     CCTTATCGTT GATATTTTTA CGTATAAGTT TATTCTATTT TTGCTCGCCA TTTTTGAACC      3120
     GGTAATTTTT CGCAAGTATG ATGGGGTTAG ACCGATCACC AACTAGGAAA TCTCCTAGTG      3180
     TCTCAAACCC TGTTTGTAAA TTATGTGCAG CCGAGATCAG CACACAAGAT TTGTATGTGA      3240
     CAACCTGTCA CCATGAATTT TACAGGGAGT GCATTGGCAA TCATTTTAAA AAAAGTGAGA      3300
     TCTGTTCGAG GTGCAAACTA ACCTGTAGGC CTCCAGCCGA AGCGACCGAA AGGGTAGGGA      3360
     GAGAAACTCG CAGTAAAACT AAAAATCGCC GCAACAGTAG ACGGGGGTCC TTCGACATCA      3420
     GCCAGCGGTG CTAACGCAAA TGAAGCTAGT TCAAGCGCTG TAAGTGCTAA TGCAGCTTTG      3480
     TTAGCCATGG AGCGTAGGCT TCTAGCAACG TTGTCAGAGA AGATGGCTGA TTTAGTACAA      3540
     AACGCTATCA CCTCAAGCAT GCAGCGAATA ATGCCCACTC CGAGTCCAGC TGTAGTCGTT      3600
     ACAGCCAGTG AAATGTCCGC TGATCACCCA AATGCATATG AGAGGCAGTA TTTAGCATCG      3660
     CCAAATCCAG TTCCTTCTCC ACGAAGCGCT TCTTCCGATT TGTTTGATCG GCCAGATAAA      3720
     GTCGTCCACA TATTAAATGG TTGGAAAATA AAATATTCTG GTGTAGGAGT GTCAGTGGAC      3780
     AACTTTATAT ACAGAGTCGA AGCGGTTACA AGACAGACGT TGAATGGAAA TTTCAACTTG      3840
     TTATGTAGAA ACATAAGTGT ATTGTTTGAA GGCAAGGCGA ACGACTTCTT TTGGCGCTAT      3900
     CATAAAGCGG TGAAATTCTG TGAGAGAGGT TTTGCACAGC CCTACGACTG CAATTTCGAC      3960
     AGAGTCGCGA CGATGGGGAC ATAGAGGAAC TGATCAGGAA TACCAAACAA AAACCAAATG      4020
     AAACTTTTGA TAGTTTCTAC GACACGGTAT CCGAGTTAGT CGACCAGCTA GAACAGCCTT      4080
     GGACAGCCAA CAAACTTGTC CGCGTGCTAA GAAATAATCT TCGTCCTGAG ATCCGCCATG      4140
     AAATTCTAAA CTTAGATGTC CGAACGGTGT CAGAGTTGAG AGAGATTTGT AAGCGAAGGG      4200
     AGGCATTCCT GGCTGACGTC AGAAGATGCA GTAGCTACGC GAAAGATACT CCGTTTAAAC      4260
     GCGAGATCTC CGAGGTCTGT CACGAGAGTG AAGATGAGGT GAGGTCAACA TACGAAGCTG      4320
     AGAACGACAT CGAATCTTTT TCCCTAGTGT GTTGGAATTG CCGAATCGAA GGACACCGAT      4380
     ACCAAGAATG TATAGCCGAA AGACGAGTGT TTTGTTACGG GTGTGGTGCA GCAAACACCT      4440
     ACAAACCAAG TTGTAGAAAA TGTTCAAAAA ACTTCAAGGT CGGCATGTCG AAGTTGCCAG      4500
     TCAAACCGAA GACTTCAAAT GCCGCAAGGA ATCAGTCGAC AATGACCGAT CAGTAGAGAA      4560
     CACCGATAAA AGTGTGTCTC TACCCCTCCC TGACGTACCA ATTAAACCGG CTATTAGACT      4620
     GCTTCACAGC AAAATTTCGG AATTACGAAA CGTCTGCATT TCGGATTCCA GAAAAACTGC      4680
     AATTTTTAAA CGGAAATCTC GTAGTGCTCG ACGCTTGAAA TTGTTCTGGA AGAACGTAAA      4740
     AAAAATGTAA AGCCAGTTTG GATTACATCA GTTCTATTCC AACAGGACCT CGAGACCCTC      4800
     GACCGTTCTT ACCGATGCGC TTATTGAATT GCCTGGTCTA CGGATTGTTG GATTCAGGCG      4860
     CATCGATTAG TTGTATTGGA GGAGGGGTAG TGCAAGCTGC GATGGAAAAC GAGAAGTTTA      4920
     AGTCGTTAAT AGGAGAAGCT GCGACAGCAG ACGGGAATTC TCAACGTATA GTAGGACTGC      4980
     TAAAAATAGA AGTGGAATAC GGTGACATCA AAAAGCTTTT GAAGTTGTAT GTCGTTCCAT      5040
     CGTTAAAACA GGATCTCTAT TTGGGAATTG ACTTTTGGAA ACTATATGAC CTCCTTCCTG      5100
     CTAATTTGAA AATAGCTGAG ATATTGTCGC CTGAGCCCAA CCAGCAAACG GTGGTGGATC      5160
     AGCACGAATT ATGTGAAGGT GACAAAGCCA AGTTGGCCAA TGTAATCAAC TGTTTTCCTT      5220
     CCTTTAGCCA GGAAGGGTTA GGTAAGACGA ACTTGGTCTC TCATTCGATC GATGTGGGCA      5280
     CCGCTAGGCC TGTGAAGCAA CGGCATTTCC CTGTCTCCCC CGCCGTCGAA AAAGCAATGT      5340
     ATGCGGAAAT CGACCGGATG TTACGCTTAG GGGTGATAGG GGAGTCTGAG AGTGCTTGGT      5400
     CTTCGCCGAT CGTGATGGTG ACTAAACCAG GCAAAGTCAG AATTTGTCTT GAATGTCGCA      5460
     AGGTTAATAG TTTTACGGAG ATGGATGCAT ATCCGTTGCC CCAAATAAAC GGGATACTGA      5520
     GTCGTTTGCC GAGAGCTGAG TACATATCGA GCCTAGATCT GAAGGATGCA TATTGGCAGG      5580
     TCCCTTTGGA TCCTAAGTCT CGGGACAAAA CAGCTTTTAC CGTCCCGGGT AGACCGTTAT      5640
     ATCAGTTTAA AGTCATGCCT TTCGGGTTGT GTAACGCCAC GAGCACTATG TCACGGTTAA      5700
     TGGACAAAGT AGTGCCGGCT CATTTGAGAA ACGAGGTTTT TATCTATTTA GACGACCTAC      5760
     TAATAGTATC TTCTTGTTTT GAGAGCCATT TGAATGTACT GAGGGAGTTA GCCCTGCAGA      5820
     TAAAGCGCGC GGGCTTAACG CTAAACGTCG CCAAAAGTCA CTTTTGTATG CGACGAGTAC      5880
     GCTATTTGGG CCACATTATC GGAGACGGTG GAATTCGCAC AGACCCTGAA AAGGTGTCCG      5940
     CGATTACCGA TTTCCCATTG CCTAAAAGTT TGAAAAGCTT GCGCAGTTTC ATGGGATTGT      6000
     GCGGATGGTA CAGGAAATTT GTCGCAAACT TCGCGACACT TTCTGCACCA TTGACTGACT      6060
     TGATGACCAC GAAGCGGAAG TTTCTACTAA CGAAGGAGGC AATTGAAGCG TTCAGCAAGC      6120
     TCAAAGAGTG TCTTAGCAAA GCTCCAGTCC TGTGTAGTCC GGATTTTGCG AAGCCGTTTG      6180
     CCATACATTG CGACGCTAGC AAGTCAGGCG TGGGTGCCGT GCTGGTACAA GTGTCTGAAG      6240
     AAGGTGACGA GCGTCCTATC GCTTTCGTTT CGAAGAAGCT GAACAAAGCT CAACGAAATT      6300
     ATACCGTCAC AGAGCAGGAG TGTTTGGCCG CAATAGTAGC TCTCAAAAAC TTCAGAGCAT      6360
     ACGTGGAAGG ACTCCCTTTT AAAATAATAA CCGACCATGC TTCGCTCAAG TGGCTAATGT      6420
     CCAATCACGA TCTAAATTCA CGACTGGCGC GATGGGCATT AGCTTTGCAG AGATTCAAGT      6480
     TCGAGATTGA ACACCGTAAG GGTTCTTTAA ATGTCGTCCC GGATACATTG TCTCGTGTTA      6540
     ACGAGGAGAT TGTAGCCGCG ATGGACTTGC AAGAAGACTT AATTGTTGAT TTCGATTCTG      6600
     AATTTTTCCA GTCCGGTGAC TACGTAAAGT TGGTAGAGAC CGTAAAGGAA AATACCTCGA      6660
     ATTTTTCTGA TCTCAAGGTG GAGAGCGGGT TTTTATATAG AAAAGCCGAG CACCTGACTG      6720
     GAGAACGAAT GCATGACGAA TACGCCTGGA AACTTTGGGT CCCCAAAGAA TTGGTATCGA      6780
     AGATTCTGGC TCGCGCGCAC GATAGTCCGT TAGCTGCGCA TGGTGGCATA CACAAAACCT      6840
     TGGAAAGAAT ACGGCGATAT TACTTCTGGC CCGGTCTCGT TTCGGACGTG AGGGCTTATA      6900
     TTAGTGCGTG TGAGGTTTGT AAGAGTACAA AATCTCAAAA TTTCACTCTC AGACCACCAT      6960
     TGGGAAAAGC GCCTGAGTCT CAGCGATTCT TCCAGCGTTT GTTCATTGAT TTTCTCGGAC      7020
     CGTATCCTAG GTCAAGGAGC GGCAACATAG GAATCTTTAT TGTTCTGGAT CATTTTTCGA      7080
     AATACGTGTT CTTGAAACCC GTAAAGAAGA TTGATTCCAG CGTCGTCATA AAGTATCTGG      7140
     AAGACGAGTT GTTCATGACG TTCGGAGTGC CCGAAGTGAT ACTGTCTGAC AATGGTTCCC      7200
     AATTTCGAGC TAGGACGTTC CAGAGACTTA TACGGCGTTA AGCACACGCT GACCGCTGTC      7260
     CACTCGCCTC AGGCAAATGC TTCTGAGCGC GTGAACAGAT CAGTAATTGC TGCAATCAGG      7320
     GCCTATCTGC GTCTCGACCA GAAAGACTGG GACGAGTTTC TCAGCCGAAT ATGTTGTGCG      7380
     TTGAGGTCGG CGGTGCATTC TAGCATTGGT ACCAGTCCCT ATTATATGGT ATTTGGGCAG      7440
     CACATGATCA CGTCAGGGTC GACGTATTCG TTGATCAGAC GCCTAAATCT CCTGGACGAT      7500
     CGTTCTCTAA AGTTCGACCG GCACGAATCT TTCGAGATAA TGCGGAAGCA AGCTGTTGAT      7560
     CAGATGAGAA ACAAGCACAA CGAGAACGAG AAGCGGTGTA ATATCCGTTC TCGTGTGGTA      7620
     TCGTTTGTCG AAGGGCAAGA AGTTTATCGC GAAATTTCAA GCCAAGCTGT TTCCAAACCG      7680
     GTTACAACGC CAAGTTTGGA CCGACGTTCG TGAAGTCTCG AGTTCGGAAG AAGATCGGCA      7740
     ACGCGTATTA CGAGCTGGAG GATCTCCAAG GACGAGTTGT GGGTACCTAT CATGCCAAGG      7800
     ACATTCGGCA GTAAGGTGCT TCCAGTCGGT CTCAGCCTAG TGTGTCTATG AGTACCCTAG      7860
     TCTGAGTGTA GCGGGGGGGT TTTGTAGAGG CGACTGAAGC AGTGGGTGAG AAAAATCTCG      7920
     ATGAATAATC GATAGGGCGG TCAGCTGTGA CACACTAAAG TGAGGTCTTA CTAGATGTAG      7980
     CAAGAAGTAG CTAGAATATA CCAGACTGGA TGCAACCCTT ATTAGCTGCA CCCGATAAGT      8040
     TTGGTATAAT TCGGTTATCG GAGAAAATGT GTTGTTCAGC TGATCGTGGT TTCCGCCGAT      8100
     GGCCTACGCC TCGACTAATG TTTCCGGTTT GCCTTCTTTT CGATCTGAAC AGTCAACGCG      8160
     TCAAGTTGCG AAAGTGCGTC GAAAAATTTG AACTTGCGGT CATACGGAAT TTTTTTGTCG      8220
     CGCGAAATAT CGAAAATACG GCGTTCCTTC GCCTATAGTG ATGCGCGAAA TAATTCCGGC      8280
     TTGTGTTTCC CGGCGATATT CAGCCGAAGA GATCGGCGTT CGTCACGGCC ATCTCACTGC      8340
     CGCCTTGCCG CCAAATCCTA GCTTCGACTG GGTCAAAGTG CAGGTTAGTG AGTTTCGAAA      8400
     TATTGGTGAA CCGTAGTTTG ATACGGGAAT ATAATCGCAG CAGTTTTCGC TGGACATCTT      8460
     ATACTTTCGC ATCACTGCCC GGGTCCTACG ATTTTTCGGA GCCGCCACCG GCGGGCAGAA      8520
     GGAGAGACGG CAACTGCGCC AGGCGAGTAG TGGAGCGCCT TTCCAGCAAG CCGGAGCGAA      8580
     GGACCAGCCG CAGCAGCAGG ACAGCGACCG CCCTAAGTCG GGGCCACCAG GAGGGATCTT      8640
     TAAACAAATA AAAATGCAGC CTAAGTAGAG CTTAGAGTGA GGTTAGAGTG AATGGAAAAT      8700
     TTTCTTTTTG CTTGATTGGC AGTCCAGAAT GCCCGAAATT AAATTAAATC AAAGTTAAAT      8760
     CGAGCAAAAT TTCTAATTAT ACAAAAAAAT GCTGAAAGCC AGACCTAACC TTACTAGAGA      8820
     GTATTAATTC AACCTGATCG CCATCTTGGA CATAGAGTGG CAGAAATTAA AATTTTTCCT      8880
     ATGTAGTTTA AGTTTAACGT TAAGCTATAA GAATATGTAC TCGAATAGGA AACTCGGTCA      8940
     TACTGTTTAA TAATTTTTCT TGGATTTAAA AAAAATGAAT TCTTATTAGT GATTAAAATT      9000
     TTTATATAGT AAGTGATTTA ACCTAAGCTA ATTAATTGTT TTAGAAGAGT TCTCTTTCGA      9060
     AAAGTGCTCA TTTAAATTTT CGAGTAGGGA TTTATAAAAG TTTGATCGCA GTCGTGTAAT      9120
     CCAAAATTAT GCCTCCTTAT AGTGTTTGTG GAAAAAAAAG CCACCTTTTC GTTTCAGCTC      9180
     ATCTGCGCCG GGAGATCGAT CTTTCGCCGA GGAGTGAAAA GTTGAGTGAG TCTCATTGAT      9240
     AAAACTTTAT TTTATTGGAA ATTCGGTAGT AAACCGATTA CATTTTGATA GAGGTCATCT      9300
     TATATTGTAT ACACACTGCA AATAAAAAAA GTAATAATAA TGGAGTGGCG AGAGCAGCCA      9360
     TTTGAAATAT AATGAGAAAA AGACAAAAAA ATGAAAAAAA GATCTAACCG AATTTACTCG      9420
     CGGCTCTCTC TCAAACAGAA TTAAATTTTT TTTCGTTAAA GATTCGTTAT AAAGAAAACT      9480
     CAAAGAAAAT AAATAAAATT AATAATTCAC AGAACGAGAT TATAGAGAGA ACGAAAATTA      9540
     TTAATGATTT AAATGAAAGC TTTGTTCCTT CCCAAAAAAA AAAAAATATA TATATTTATA      9600
     CACTAGTATT TTTAACTTTT AATTGTAATG ATCTCGAACA TCGAATTGAA TCTACATTTT      9660
     CTGATCTCGC AACTGAGAGA AAAACTTTGC TTTGAATTCC TTTGAGTTAC ACTAGTCTGT      9720
     ATTTTTTATA TTTACTTGGT TCCTTTAGTA TGTACTTATT TTTAGATATA AATATTGTTA      9780
     TTAATTATTA AGCATTGATT GATTTTAAAA ATATGAATTT CTAAAAACCT AAATGCTGAC      9840
     TCGGCTGATG TTTCTCCTGA CGTAGGGCAC TAAAGGGGCC GCTAGAGCTA TGCTCTTAAG      9900
     GAAAGTGGTC TAAGGTAGGG TAGCGCAATG CGCGAACACG ATTCCACCTG TGTTTCGCAG      9960
     GCGAAAAATT CTCAAACTTT CCTCCCATTC TAGAACTGTC CGCTTCCGAA AGTATTAATT     10020
     GGCTTCCTCC GATTTTTGTA TTCTAGCTCC TTCATTTTGT TGTTGTTGCA AGCACGCTCA     10080
     ATTTCTTGAT CTTATTAATT GTTGTCTGTA ACGAAAAGAG ATCTGTACAA GCAAGACCAC     10140
     CACACCCGGC CTCTAAAGCG TGCACCCGCA AGTACAGGTA CTCCAGTCGT CCATCCGTTT     10200
     AATTCGTTAC ACGTTACA                                                   10218
//
ID   INVADER6   standard; DNA; INV; 4885 BP.
XX
AC   NT_033778;
XX
DR   FLYBASE; FBgn0067385; invader6.
XX
FT   source          NT_033778:1483681..>1488172
FT   SO_feature      five_prime_LTR ; SO:0000425:1..393
FT   SO_feature      three_prime_LTR ; SO:0000426:4494..4885
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase9.02.embl/drorep.ref
XX
SQ   Sequence 4885 BP; 1486 A; 952 C; 1071 G; 1376 T; 0 other;
     TGTCGCATCA TTATTAGTCT TATTTTTATT TTCTATGTTC CATCTCTAAT AAACATGTCA        60
     TCTCTATTAA ATAAAATTCG TATCGAGCTG TTCTTGTCTT CGTTTCTCTT TGATCGCTGT       120
     TCGCTGTGTT CCGTTATGCG AGTTTAACGG GTTTTGCTCT GTTCTACATA GTCTCGGTTC       180
     GACGATGCGT TAGAGTGAGA CAAATGCTTG TCCTGTGGTG AGTTCGGACC AGCATGTATC       240
     AAGCGAGATA GAGCGATGTT GAAATGTACA CGGGGCACTT ATGTTTGAAA ACTCTGAGAA       300
     AGCGGACGCG TGAATATGTC GCAACCGAGG AAGTGTACGA CTCGCGGGCG GAGCGCGGCA       360
     ACAGAGGACC CCGAATCAGT TAACTTCCCG ACATCAGAAG TGGGATCGCC TCAGCCCCAA       420
     GCCATCACTG ATGATCGCCT GTCCACAATT TTAGAAATGC AGCATCGTAA TCTATTGGAA       480
     ATTGTAAATG CCGTGAGGGG CTCGCAGACT ACACAAGTAG TTGTACTACC CAAGTTCAAC       540
     CCTGAGTCCG CCGGTTCAAG TGCAGCCACT TGGTGCTCTA CAGTGGACCT TATTGTAGGA       600
     GAAAATCCTC TGGATGGCAG TGCTTTGCTC ATGGCCTTAA CCAAATCATT GGAGGGCAGT       660
     GCTTCTAATT GGCTGTCACA AATTTGTTTC GCCGGAATGA CTTGGAGCCA ATTCCAAGAA       720
     ATGTTCCTTC AGCAGTATGA AGGCAATGAG ACGCCAGCAG CAACAGTCTT TAATGTATTA       780
     AACGGGCGGC CAAACGACGG CGAATGTCTT GCGCTGTATG GTAGCTGATT AATAACAACA       840
     CTTATGGCAA AATGGAAGTC TATGACCGCA GAAGAAATTG CAGTGTCTGT TGCCCTGGCA       900
     CATGCTGCAA ATATAGATGG TAGGCTGCAA CGCACTGTGT TCACAACTAC TGTCAAAACA       960
     CGCAACGAGT TGCAGAACGA GCTAAGAGCG TTTTCGTATG GCAAGAGGAA GGACCATCCC      1020
     GTTCCAGAAA ATTCTACCAG CAAACGAGCT CGCCTACACC CAAATGTTAA GTGCCACTTT      1080
     TGTGGAAAAA TTGGCCACAA GATAGCTGAC TGCCGCTCCA TGAAAAACAA CTTAAAGAAT      1140
     CAACAAGGAT CTAGTTCGAG TATTGGGCGC TTATCTGACT CTAAACCTGG GTCAATTACT      1200
     TGCTATAGAT GTGGAAACCA GGGGCATATA GCGTCAGCTT GCCCTGCAAG ACAATCGTTG      1260
     TCAAACCAAA CTAAAGCCGA CGAGAAGCGT GTCAACGTGT GTCACGTAGT CGAGCCAATT      1320
     GGGACATTGA TATCATCTGG TGAGTCGTAT CCATTTTATT TCGACTCTGG AGCCGAATGC      1380
     TCACTTGTAA GAGAATCTGT GTCCACCCAA CTCTCGGGCA CACGAATTAA CAACAATGTA      1440
     GTTTTAAAGG GTATCGGAAA TAATACTGTT ACCAGTACAT TACAAATTTT GTCAAACGTA      1500
     ACAATAAGTG GTTACTGTCT CGAAGTGCTT TTTCACGTAA TTCTTAATGA TTGCATTAAT      1560
     TATAATATTA TAATTGGACG CGAAATTTTA AGTCAGGGAT TTAGTGCTAC TATAACAATA      1620
     GATAAAATAG AGTTATGTAA AACAAGGTCT GTGCAAACCC TATCTGCTTA GAGTAGTAGT      1680
     TTTAGTCTTG AAAATGTTAA TACCGAATTG TGTGGCGAGG ATAGGAAAAT CTTGGTAAAT      1740
     CTTTTGAATA AATTCTGTGA CTCATTTATA GACGGTTTTC CCAAAAATCG TGTTACAACT      1800
     GGCGAACTAG AAGTACGCTT AATTGATCCA ATAAAAACTG TACACAGACG ACCGTACCGA      1860
     CTTAGTATAG AGGAAAAACA AATTGTCCGA AACAAGGTTA ATGAGCTGCT GTTAGATAAC      1920
     ATCATCCGTC CTAGCAGCTC ACCGTTCGCC AGTCCAGTTT TACTCGTTAA AAAGAAAAAT      1980
     GGTTCTGATC GCCTTTGCGT GGATTACCGC GAACTAAATA CAAACACAGT TGCAGAGAAA      2040
     TATCCCTTAC CACTAATTAG TGACCAAATA TCTAGGTTGC GTGGAGCAAG TTTCTTTAGT      2100
     TGCTTGGATA TGGCCAGCGG GTTTCATCAG ATACCTATTC ACGCAAATTC AATTGAGCGC      2160
     ACGGCTTTTG TGACACCTGA CGGCCAATTC GAATTTCTAA CTATGCCCTT CGGGTTAAAG      2220
     AATGCCCCAT CCGTGTTCCA GCGTGCAGTT ATGAAAGCTT TGGGTGAGCT TGCCCACTCT      2280
     TACGTTATCG TTTATATGGA CGATATAATG ATTATCGCAG AAACAAAAGA AGAAGCTTTT      2340
     GTAAGGTTAA GGACAGTTTT GAAAATATTA TCGCAGGCTG GGTTTTCTTT TAATATCGGA      2400
     AAATGTTCAT TCCTGAAATC TTGCATTGAA TATCTGGGGT TTGTGGTAAA AGAGGGCGAA      2460
     ATAAGACCAA ATCCATCTAA GATAAAAGCA TTAGTCGCTT TACCGCCTCC GCAGTCTGTT      2520
     ACCCAAGTAA GACAAATTAT TGGCCTAGCC TCTTATTTTA GGCAGTTTGT GCCAAAGTTT      2580
     TCAGAAATCA TGAAACCCTT ATATAGACTG ACCTGCAAAA ACAAAATATT TGAATGGAAA      2640
     CTTGAACACG AACAAATTCG TCAAAAAGTC ACTAAATTGC TTACAGATGA GCCCGTCCTT      2700
     GTTATCTTCG ATCCTCGGCA TCCCATTGAA CTGCATACAG ATGCCAGTAT GGATGGCTAC      2760
     GGAGCAATTC TACTCCACAA AATAGATAAT AAACGTCGTG TAGTTGAGTA TTACAGCAAA      2820
     CAAACATCCT TGACGGAATC TCGATATCAT TCGTACGAGC TTGAAACTTT AGCTGTGTAT      2880
     AACTCCATGA GACACTTTCG TCACTATTTA CATGGGCGAA TTTGTTGTTT TTACAGACTG      2940
     TAATTCCCTA AAAGCTACTC GCAACAAGAC TGAACTAACG CCGAGAGTAC ACCGTTGGTG      3000
     GGCATATATG CAGTCCTTCG ACTTTGACTA GAATGACTTA GACTTAGAAT ATAGACCTGG      3060
     TGCCATAATG GCACATGTTG ATTTCTTGTC ACGCAATCCA CTGCCATCTG CTCGGGTTAT      3120
     TACTGGTGAG GAAGAAAAAC ATGTTCTATT GGCCAAAATA ACGGACAACT GGTTACTTGC      3180
     AGAACAGCAA AAGGATTCAG AGATTTCCAC GATTGTTGTT AAAATACAGA ACAATGAATT      3240
     GGGTGAGAGC TCGGCAAAAA GTTATGAATT ACGCTCGAAA ATGCTTTTTC GCAAAATTCA      3300
     AAGGAACGGT AAAACTCGTT GCCTGCCAGT TGCCCCCAGA TCATTCAGAT GGTCAGTAGT      3360
     GAACCAGGTC CATGAAGCAG TTGTACATTT GGGTGGGAAA AGACTTTAGA CAAAATGTAC      3420
     GAATTTTACT GGTTTGAGAA CATGGCCAAA TATGTTCGTA AGTTCGTTGA TAATTGCATT      3480
     ACGTGTAAGT TAACTAAGCC TCCGTCAGGA AAATTGCCAA TCGAACTCCA CCCCATACCA      3540
     AAAGTAGAAA TTCCATGGCT ATAAGTTGTA CGACAAATCG CATAACGAAA GCCAGTCCTC      3600
     TTGAATTACT AATCGGAAAA GAATGTAGAC CATTTAATAT GTTACCAATA TGTGAACAAG      3660
     TTAATAAAGT CGATGTAAAT ATTATAAGAA ATATCGCGAG AGAAAATATT AAGAAGAACG      3720
     CCTTGTATGA AAAAACTAGA TTCGATAAGC ACAAAGCCAA ATTTGATAAC TTTGGTGTTG      3780
     GCGATTATGT TTTACTTAAG AACGAAGAAA GGCACCAAAC AAAATTAGAC CAAAAATATA      3840
     AAGGACCTTT CCTCGTGACA GAGGTACTTA AGGGAGATCG TTATATTTTA AAATCTTTAA      3900
     CTAATAAGCG GACTTATAAG TACCCACATG AAGCTTTGCG CAGTATGCCA ACAGAGGAGA      3960
     TCCCCAAAGA GTTAGATCTA TGTGACGATC AAGAAAACGT TGAAAGAGAC GTTAGAAATC      4020
     CCTTGGTGGA TTCCAATGTG GATGAAAACG TCGAAAGAGA CGTTAGAAAT CCCTTGGTGG      4080
     ATTCCAATGG GGATGAAAAC GTTGAAAGAG ACGTTAGAAA TCCGTTGGTG GATGCCAATG      4140
     TGAGCGAAAA GTTACTGAGT TGTTTGAAGA CTCAAGTGAA TGAGAGGCAT TGATGGATTT      4200
     CAATGCGAGA TTGGGGACAC ATGCAACGTC GCCAAGTTGC CAGTGCTAGT AGGTACAAGT      4260
     GTTACTGTGT TGACTTATTT GATGTCTGGT GACTGGCGGC GTGGCGGGTT GAATTGTCCT      4320
     AGTGTGTTGC TAATAATAAC AAACGATCTT CTTGGTACTT CTGTCACTCG AGTTGGTCGA      4380
     TAACAAGAAA AATAATAATA ATAATTACGT TTAATGTTAT CTTTCTAGAT TAAGCTTGTT      4440
     TAATTTCAAA ACTTATATTA CACACGAGGA CGTGTGCTGG TCAGGAAGGC CGTGTCGCAT      4500
     CATTATTAGT CTTATTTTTA TTTTCTATGT TCCATCTCTA ATAAACATGT CATCTCTATT      4560
     AAATAAAATT CGTATCGAGC TGTTCTTGTC TTCGTTTCTC TTTGATCGCT GTTCGCTGTG      4620
     TTCCGTTATG CGAGTTTAAC GGGTTTTGCT CTGTTCTACA TAGTCTCGGT TCGACGATGC      4680
     GTTAGAGTGA GACAAATGCT TGTCCTGTGG TGAGTTCGGA CCAGCATGTA TCAAGCGAGA      4740
     TAGAGCGATG TTGAAATGTA CACGGGGCAC TTATGTTTGA AAACTCTGAG AAAGCGGACG      4800
     CGTGAATATG TCGCAACCGA GGAAGTGTAC GACTCGCGGG CGGAGCGCGG CAACAGAGGA      4860
     CCCCGAATCA GTTAACTTCC CGACA                                            4885
//
ID   DNTOMRETA  standard; DNA; INV; 7060 BP.
XX
AC   Z24451;
XX
DR   FLYBASE; FBgn0004357; Dana\Tom.
XX
FT   source          Z24451:1..7060
FT   SO_feature      five_prime_LTR ; SO:0000425:1..474
FT   SO_feature      three_prime_LTR ; SO:0000426:6587..7060
FT   SO_feature      intron ; SO:0000188:1277..5158
FT   SO_feature      CDS ; SO:0000316:859..2055
FT                   /db_xref="FLYBASE:FBgn0028827; Dana\Tom\gag"
FT                   /protein_id="CAA80823.1"
FT                   /translation="MAQPAQPENTLNESNLAEARGQLKDVPPFRGEPETLFTFISRVDY
FT                   ILSLYHTNDVRQQRILLGAIERNIEGHVTRTLGLPTIEDWPTLRSRMINEYKPQAPNYK
FT                   LLENFRETPYKGNLRAFCEEAERRRQILISKLHLEGNQSNLIIYLQAVRDSMKTLVRKL
FT                   PIQLFTILAHHDIPDLRSLINIAQNEGIYEEHINFETNKNIEIKNKTPNFYQNPKAFKN
FT                   YPINQSQYQPRYPQYPHPLQPNFNPYMHAPRPIYTQQLSNNQPMGPGQTYPGPNRYMNP
FT                   QPIFNRIPFPKSNFNLTPQTQQPRMPSNPNFPLQQTTKRPRPSDSEQTKMSIDELRLQE
FT                   AQEYEQNYQQPYEQEYYDYTQYQDQTYEEQCQAPINQDQAEINFDENFQSPAPEDTNT"
FT   SO_feature      CDS ; SO:0000316:2115..5237
FT                   /db_xref="FLYBASE:FBgn0028826; Dana\Tom\pol"
FT                   /protein_id="CAA80824.1"
FT                   /translation="MMRKNFFSLPIHNTECEVFTSNGPMTLKDSITLPSNNIFRTPEQF
FT                   YLHDFSDDYDVLIGRKLLNKAQGIINYKTHTITLFDKTYPLIDTDSNKGQFFYTQDSYE
FT                   KPIPKSDKKIDFSPFRLDHLNPEETYKLKHLLNKFKDLQYFEGERLTFTNTIKHVLNTT
FT                   HNSPIYSKQYPLAQTHENEVENQVQEMLEQGLIRESNSPYNSPTWVVPKKPDASGKAKY
FT                   RVVIDYRKLNEITIPDRFPIPNMDEILGKLGKCQYFTTIDLARGFHQIEMDSESIQKTA
FT                   FSTKRGHYEYVRMPFGLRNAPATFQRCMNNILRPLINKHCLVYLDDMIIFSTSLDEHLN
FT                   SLQLVFEKLSESNLKLQLDKCEFLKKEATFLGHIVTPDGIKPNPLKVEAIASYPIPTKV
FT                   KEIRAFLGMTGYYRKFIPSYADIAKPMTRYLKKGAKIDINNHEYVEAFEKLKTLITSEP
FT                   ILQLPNFEKKFVLTTDASNLALGAVLSQDNHPISFISRTLNDHELNYSTIEKELLAIVW
FT                   ATKTFRHYLLGRHFQIASDHQPLRWLHNLKEPNAKLQRWRIRLAEFDFHIEYIKGKQNS
FT                   IADALSRIKVEENHFSEATQHSAVEDNNDLIQLTEKPINVFKKQIIFIKSDQNSVRQTT
FT                   VFGNSITTIHYNNMTVENAKQFLLDHFISKSIAMYIVSDADFEIILTAYREIINPSYTK
FT                   VTRSLILLNNVSSYAEFKEIILQAHEKLLHPGIQKMTKLFKENHYFPNSQLLIQNIINE
FT                   CRVCNLAKTEHRNTKMPFKVTPSPGHCRDKFVIDIYSSEGKHYLSCIDIYSKFATLEQI
FT                   KTKDWIECKNALMRIFNQLGKPTLLKADRDGAFSSLALKQWLESEGVELQLNTAKTGVA
FT                   DVERLHKTINEKIRIINSSKNDEIKLGKMENILYIYNHKTRHDTTGQTPAHIFLYAGQP
FT                   TLDAQKIKEQKINKLNDDRQEYDIDTKFRKGPLQKGKLENPFKENKNVEQTDPDHYKIT
FT                   NRNRTTNYYKTQFKKRKKLMRSPFHRYLAHSDDTVPVAYHELCPTNSDRRH"
FT   SO_feature      CDS ; SO:0000316:5176..6564
FT                   /db_xref="FLYBASE:FBgn0028828; Dana\Tom\env"
FT                   /protein_id="CAA80825.1"
FT                   /translation="MILSLLLTMSYAQQIQIGGIDTNHGYLLFSSKPIQRPSAFEHHCL
FT                   TVNLTEINTITTYFGNKIQNSTDTPRIKFLYNKLIKELNGITLHKERRQKRGLFNFVGS
FT                   AFKFLFGTLDDNDRIQFEEKLNSEAENSIKIHEFNEVMQFVNDGLQRIKKYENNRNSID
FT                   TLVYELMQFIEYIEDLEMGMQLSRLGLFNPKLLNYDKLQNVNSENILLTKTSTWINYKN
FT                   NEILIISHIPINHVLINTIKIIPYPDRNGYQLEYSGSDSYFENDNKIYNQDNKEVNSEC
FT                   IANIIKRRNPTCNFVPALTKEIIKYIEPNVIITWNLTQTTLTQNCQNSNSNIQIKGNKI
FT                   IRITQCKVKIENIILSENYLHPEIDLTPLYPPLNITKIKILKHNDIIKMISQNNITLYT
FT                   IIIPAILALVAMILILKYINFNPFIFLYIKLRKQTERNQPQLQENELGENPLPTLYPSM
FT                   PAQV"
FT   SO_feature      intron ; SO:0000188:1277..5158
XX
CC   Derived from Z24451 (Rel. 44, Last updated, Version 6).
CC   Michael Ashburner, 17-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7060 BP; 2781 A; 1492 C; 1029 G; 1758 T; 0 other;
     agtgacatat tcactctcac acccatctac taatatccaa ttactgcata tccaattact        60
     gcagccaagt aaacaaataa caagagctgc gcatcatttt tgctgtgcag aaaatttaat       120
     ataaacaaat gaccgatatt cagcggcgat cgcgccttaa gcatcttcgc ttatacaaac       180
     caaataatcc ataagctctc tcaatgaatc aagcgaccaa ctgcactctc attctaatgt       240
     aaacaataga caatagccaa aaccaagatt ttcatctctt tgtaaatcag tcttaagctg       300
     aaatccaatt gacacacacg aaacctttct ttcgtcccgt acaattttaa taaataataa       360
     ataacaaaac atttttttta aaattggttt ttattttatt aaaaacggat cttagcgttg       420
     tccttagtct ttcgacggga catttatttg actcaaaata taaactattt tactggcgca       480
     gtcggtagga tacttcaagt atccgaaaaa aaagaaccgc gagtggaaaa taaattaaat       540
     tttataatcc gcaattcgca aaaatacgct cttcaactgg gaaaataaat ccaattcggt       600
     tatcccaaat aagtggaagc aaaacaaaat tcaaaaactc aaaaacctgt aagtccaaag       660
     gcaaggtaaa aacatcgaac taagtgacaa tcaaataaaa acatcgaact aagtgacaat       720
     caaacaaaaa catcaaacaa agtgacaata aaaaataaaa aataaaaaat aaaaaaataa       780
     aataaaaata aaaataaaat ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaag       840
     aacaacaaca aaaacaaaat ggcacaacca gcacaaccag agaatacatt aaacgagagc       900
     aaccttgctg aggcccgtgg acaacttaag gatgtccctc catttagagg agagccagaa       960
     acacttttta ccttcatcag cagagtggac tacatactgt ccctctacca taccaatgat      1020
     gtgcgacaac aacgcatcct gcttggagcc attgagcgga acatagaggg tcatgtgact      1080
     agaacattgg gtctgccaac catagaagac tggccgacct tgaggtccag aatgatcaac      1140
     gagtataaac cacaggcgcc gaactacaag ctgctggaga acttccgcga gacgccctac      1200
     aagggaaatc tgcgtgcatt ctgcgaggag gccgagcgac gacgccaaat actcatctcc      1260
     aaattacatc tggaaggtaa tcaatcaaac cttattattt atttgcaagc ggtccgagat      1320
     tccatgaaaa cactagttcg aaaattacca attcaattgt ttacaatttt ggcccatcac      1380
     gacattccag acttgagaag tttaattaac attgcacaaa atgagggcat ttatgaagaa      1440
     catattaatt ttgaaacaaa taaaaatatt gaaattaaaa ataaaactcc aaatttttac      1500
     caaaatccga aagcatttaa aaattaccca atcaatcaat cccaatacca accgagatac      1560
     ccccaatacc ctcatccatt acaacccaac tttaacccat acatgcatgc acccagaccc      1620
     atttatacac aacaattatc taacaaccaa cccatgggac ccggacaaac ttaccccgga      1680
     cccaacaggt acatgaatcc tcaaccaatt tttaacagaa ttccatttcc caaatccaat      1740
     tttaacctaa ctcctcaaac acaacaacca cgtatgccat ctaacccaaa cttcccacta      1800
     caacaaacaa ccaaacgacc aagaccatcg gacagcgaac aaaccaaaat gtccattgac      1860
     gaactcagat tacaagaagc acaagaatac gaacaaaatt atcaacaacc atacgaacaa      1920
     gaatattacg actacactca gtaccaggac cagacttatg aagaacagtg tcaggcacca      1980
     atcaatcaag atcaagccga aatcaatttt gacgaaaatt ttcagtcacc agccccggaa      2040
     gataccaata cttaataatt acccacaagg gttacgctca caaatgtttg attgacacag      2100
     gatccacaat cagcatgatg cgaaagaatt ttttttctct accaatacac aatactgaat      2160
     gtgaagtttt tacatcaaat ggcccgatga cattaaaaga ttcaataact ctgccaagca      2220
     acaacatatt tagaacacct gaacaatttt acttacacga cttttctgac gactacgatg      2280
     tgctaattgg cagaaaactg ctcaataaag cacaaggtat aataaattat aaaactcata      2340
     ctattacact tttcgataaa acctacccat tgatagacac agattcaaac aaaggtcaat      2400
     ttttctacac acaagattca tatgagaaac caatccccaa atcagataaa aaaatagact      2460
     tttcaccatt ccgtctggat caccttaatc cggaggaaac ctataaatta aaacatttat      2520
     taaacaaatt taaagatttg caatattttg aaggagagcg tttgacattc acaaacacaa      2580
     tcaaacatgt attaaacaca acacacaatt cgcccattta ttcaaaacaa tatccacttg      2640
     ctcaaacaca tgaaaatgag gtagagaacc aggtgcagga gatgcttgag cagggattga      2700
     tcagagaaag taattcaccc tataatagtc ccacttgggt tgtaccaaag aaacccgacg      2760
     cttcggggaa agcaaaatat agagtagtca ttgattacag gaagctaaat gaaataacca      2820
     ttcccgatag atttcctatt cccaacatgg acgaaattct tggaaaactg ggaaaatgcc      2880
     agtactttac aacaattgat ttggctaggg gttttcatca gatagaaatg gattcagaat      2940
     ccatacagaa aactgcattt tcaactaaac gcggtcatta tgaatacgtt cgcatgccat      3000
     ttggcttaag aaatgcaccc gccacattcc agaggtgcat gaataacata ctccgaccat      3060
     taattaacaa acactgttta gtttatttgg atgacatgat tattttttcc acatctctag      3120
     acgaacattt aaactcattg caattggttt ttgaaaaact gtccgaatca aatctaaagt      3180
     tgcaactaga taaatgcgaa ttcctgaaaa aggaagcaac ctttctagga cacatcgtaa      3240
     cacccgatgg aataaaacca aaccctctta aagtagaagc catagcatca tacccaatcc      3300
     caacaaaagt aaaagaaatc agagcattcc tcggaatgac tggttattac cgaaagttta      3360
     tcccaagcta cgctgacata gcaaaaccca tgacccgcta cttaaagaaa ggagcaaaaa      3420
     tagacataaa caatcacgaa tatgtggaag cattcgagaa acttaaaacc ctaataacaa      3480
     gcgaaccaat tctacaattg cccaattttg aaaagaaatt tgtattgact acagacgcta      3540
     gtaacctggc tcttggagct gtcctttctc aagacaatca ccccatatcc ttcataagca      3600
     gaacattgaa tgaccatgaa ttaaactaca gtaccattga aaaagaatta cttgccatag      3660
     tttgggccac aaaaacattc cgtcactact tgttgggaag acatttccaa atagctagtg      3720
     accatcagcc tctcagatgg ttacataatt taaaggagcc aaatgccaaa ctgcagagat      3780
     ggagaattag attggctgag tttgactttc atattgagta cataaaaggg aaacagaatt      3840
     caattgctga cgcactgtcc agaatcaagg ttgaggagaa tcatttcagt gaagccaccc      3900
     aacatagtgc agtagaagac aataatgatc ttatccagtt aacagaaaaa ccaataaatg      3960
     tattcaaaaa acaaataata ttcattaaat cagatcagaa tagtgtaagg cagacaaccg      4020
     ttttcggaaa ttcaataacc acaattcact ataacaacat gactgttgag aacgccaaac      4080
     aattcttact tgaccacttc atttccaaaa gcattgccat gtacatcgtg agcgatgccg      4140
     atttcgagat catcctgaca gcctataggg aaattattaa cccctcttat actaaagtga      4200
     ctcgtagcct cattttattg aacaacgtga gctcatatgc tgagtttaaa gagatcatac      4260
     ttcaagccca tgaaaaactg ttgcatccag gtatccaaaa aatgactaaa ttattcaaag      4320
     aaaatcatta tttcccaaat agtcaactac taattcaaaa catcataaat gagtgccgtg      4380
     tgtgtaacct agccaagaca gaacacagaa acacaaaaat gccttttaaa gtcacaccta      4440
     gccctgggca ttgccgcgat aaatttgtaa tagacatcta ttcatccgag ggtaagcatt      4500
     accttagttg cattgacatt tactcgaagt tcgccactct agaacaaata aaaacaaaag      4560
     attggataga atgcaaaaac gccctgatgc gtatctttaa ccaactcgga aaacctacat      4620
     tgttaaaggc ggatagggac ggtgcatttt ccagcctagc tcttaagcaa tggctcgaga      4680
     gtgagggtgt tgaattacaa ttaaacacag ctaaaacggg agtggcggat gttgagagat      4740
     tacataaaac aataaatgaa aaaattcgca taatcaattc ctccaaaaac gatgaaatca      4800
     aactgggcaa aatggaaaat attctttata tttacaatca taaaaccagg catgacacga      4860
     ccggacaaac acccgctcac atatttcttt acgccggaca accaaccctg gacgcacaaa      4920
     aaattaaaga acaaaaaata aacaaattaa atgatgatcg tcaggaatac gacatagaca      4980
     ccaaatttag aaagggcccc cttcagaagg gaaaattaga aaacccattt aaagaaaata      5040
     aaaatgtcga acaaaccgac ccggaccatt acaaaattac taatcgaaac agaactacta      5100
     actattacaa aacgcagttt aaaaaacgaa agaaattaat gaggtcccca ttccacaggt      5160
     atctggcgca cagtgatgat actgtccctg ttgcttacca tgagctatgc ccaacaaatt      5220
     cagataggcg gcattgatac aaaccatgga tatcttcttt tttcaagtaa accaattcaa      5280
     agaccatcag cattcgaaca tcattgccta acagtcaacc tcacagaaat aaacaccata      5340
     accacatatt ttggaaacaa aatacaaaac agtacagaca caccccggat caaatttttg      5400
     tataacaaac tgattaaaga actaaacggg atcactctac acaaagaacg tagacaaaaa      5460
     cgcggtcttt tcaatttcgt aggctcagct tttaaattcc ttttcggcac actcgacgac      5520
     aacgacagaa tacaattcga agaaaaatta aattcggagg cggaaaattc aataaaaatc      5580
     cacgaattta acgaagtaat gcagtttgtt aatgacggat tgcagagaat caaaaagtat      5640
     gaaaacaata gaaatagcat tgacaccttg gtttatgaac taatgcagtt cattgagtac      5700
     attgaggacc ttgaaatggg aatgcagctc tcacgactgg gactgttcaa cccaaaacta      5760
     cttaattacg acaagctcca aaacgttaac agcgaaaaca tattattaac caaaacatcc      5820
     acttggatta actataagaa taatgaaata ctaataatct cacatattcc tattaatcat      5880
     gttctaatta acactattaa aataatccct tatcccgata gaaatggtta ccaattggag      5940
     tactcaggca gcgattctta ctttgaaaat gataataaaa tttataatca agacaacaaa      6000
     gaagtaaata gtgaatgtat tgcaaatata ataaaacgaa gaaacccaac atgtaatttt      6060
     gtaccggccc ttacaaaaga aataattaag tatattgaac caaatgtaat aattacatgg      6120
     aatctgaccc aaacaactct tacacaaaat tgtcaaaatt caaacagcaa catacaaata      6180
     aagggaaata aaattataag aataacacaa tgtaaagtaa aaatcgaaaa tattatttta      6240
     agcgaaaatt atttacaccc agaaattgat ctaacacctt tgtatccacc gctcaacata      6300
     actaaaataa aaatcttaaa acacaatgac attataaaaa tgatttccca aaacaatatc      6360
     acactttata caattattat accggctatt ctggctttgg tcgcaatgat tcttattctt      6420
     aagtacataa actttaatcc atttatattt ttgtatataa aattaagaaa acaaactgaa      6480
     agaaatcagc cacaacttca agaaaatgaa cttggagaaa acccattacc cacattgtat      6540
     ccatcaatgc cagcccaagt ataggctgcc tttttaaggg gggaggagtg acatattcac      6600
     tctcacaccc atctactaat atccaattac tgcatatcca attactgcag ccaagtaaac      6660
     aaataacaag agctgcgcat catttttgct gtgcagaaaa tttaatataa acaaatgacc      6720
     gatattcagc ggcgatcgcg ccttaagcat cttcgcttat acaaaccaaa taatccataa      6780
     gctctctcaa tgaatcaagc gaccaactgc actctcattc taatgtaaac aatagacaat      6840
     agccaaaacc aagattttca tctctttgta aatcagtctt aagctgaaat ccaattgaca      6900
     cacacgaaac ctttctttcg tcccgtacaa ttttaataaa taataaataa caaaacattt      6960
     tttttaaaat tggtttttat tttattaaaa acggatctta gcgttgtcct tagtctttcg      7020
     acgggacatt tatttgactc aaaatataaa ctattttact                            7060
//
ID   DH14600    standard; DNA; INV; 227 BP.
XX
AC   U14600;
XX
DR   FLYBASE; FBgn0012361; Dhyd\Bungy.
XX
FT   source          U14600:181..407
XX
CC   Derived from U14600 (Rel. 63, Last updated, Version 2).
CC   Michael Ashburner, 17-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 227 BP; 65 A; 38 C; 39 G; 85 T; 0 other;
     ATATCTATTT ATTTTTTTTT TTTAAATTGC TGTTTTTATT TGCAATCTGT CTGACACAAG        60
     ACAATAAACA ATTTTCTTTA CAATAATTTA CATAACCGGA TGAGATCATC CATTTATTTA       120
     CCTACTTTAC ATATTTAACT ATTTCTGTGG GGCAGGTCTA GCACATGAAT CTTGAGTCGC       180
     CTGAGGTGCA TGAGTCACAG TAGCTGAGCT AGAGCATGCG AGTAGAG                     227
//
ID   DVRPPDV    standard; DNA; INV; 845 BP.
XX
AC   X03936;
XX
DR   FLYBASE; FBgn0000513; Dvir\Dv.
XX
FT   source          X03936:660..1532
FT   SO_feature      direct_repeat ; SO:0000314:1..58
FT   SO_feature      direct_repeat ; SO:0000314:790..845
XX
CC   Derived from X03936 (Rel. 20, Last updated, Version 1).
CC   Michael Ashburner, 17-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 845 BP; 200 A; 166 C; 206 G; 273 T; 0 other;
     AATCATCGAA AAAGTTTCGA TTTTCGCACC GATTTTGATT TTGAAAAAAA AAACGTGACC        60
     CCTTGCCATT TTGTCGACTT GGGTCGGGGT TTAGGTTTCA TTTTTTTTAT GCCAACCGAT       120
     AGAACTAACC CTTACGGTTC AAAATGGTGT GAATACAAAA CTGGCATATT GGGAATATTC       180
     AAAACAACAA AAGTTAATTT CGAACTATGG TTTTGTAGTC TTTAACATTC GTTTTGGAAC       240
     GTCATATCTC CGCGCGGAGT TATGTCGTTT TGGAACGTCA TATCTCCGCG CGGTGTAATG       300
     TCGTTTTGGA ACGTCATATC TCCGCGCGGA GCTTTGTCGT TTTGGAACGT CATATCTCCG       360
     CGCGGAGTTA TGTCGTTTTT GAACGTCATA TCTCCGCGGG GAGCTATGTC GTTTTGGAAC       420
     GTCATATCTC CGCGGGGAGT TATGTCGTTT TGGAACGTCA TATCTCCGCG TGGAGTTATG       480
     TCGTTTGGGA ACGTCATATC TCCGCGGGGA GTTATGTCGT TTGGGAACGT CATATCTCCA       540
     CGCGGAGTTA TGTCGTTTTG GAACGTCATA TCTCCGCGCG GAGTTATGTC GTTTTGGAAC       600
     GTCATATCTC CGCGTGGAGT TATGTCGTTT GGGAACGTCA TATCTCCGCG GGGAGTTATG       660
     TCGTCTTGGA ACGTCATATC TCCGCGGGGA GTTATGTCGT TTTGGAACGT CATATCTCCA       720
     CGCGGAGTTA TGTCGTTTTG GAACGTCATA TCTTGGGCGG AGCTATTACC CGAGATATTG       780
     AAAAAAAAAA ATCATCGAAA AAGGTTCAAT TTTCACACCG ACCTCGATTT TGAAAAAAAA       840
     AACGT                                                                   845
//
ID   DBU133521  standard; DNA; INV; 9045 BP.
XX
AC   AJ133521;
XX
DR   FLYBASE; FBgn0013796; Dbuz\Osvaldo.
XX
FT   source          AJ133521:21..9065
FT   SO_feature      five_prime_LTR ; SO:0000425:1..1195
FT   SO_feature      three_prime_LTR ; SO:0000426:7850..9045
FT   SO_feature      intron ; SO:0000188:5624..6439
FT   SO_feature      CDS ; SO:0000316:<1267..2509
FT   SO_feature      start_codon ; SO:0000318:<1..2
FT                   /db_xref="FLYBASE:FBgn0027838; Dbuz\Osvaldo\gag"
FT                   /db_xref="SPTREMBL:Q9XZR6"
FT                   /protein_id="CAB39732.1"
FT                   /translation="TMVRAWVYNLKKDDVLRYGDEFGVTLSGTLDVMRRQFGEWVETNE
FT                   GRIPYSLTVAELARLHGRRPSNSEDVPTVIVGNDQYEEDPNAARQSLPSTSAAARLQQT
FT                   EQGAWRATSTPQPEIRTRGPSSSEQEYPKVAKHVREWNFRFDGTSKPLEFLEQVEWSAD
FT                   TYGLDLDLIPRAMPELLKGMALKWYVANNRHWRTWGTFVRSFQEFFFAEDYLEDLKDEV
FT                   KRRKQMVDEPFKIYMVEMQTLMRPLRYGPDHEMKLIYNNSIPDLRAYARPYQFQSLMEL
FT                   MKLADEFEELERDRERLRRLQRPARTRLMAMEEDDGHEEEMLRRGALEESPRPAPRTGA
FT                   TGQRTHIPNPSRACRVCGQEGHRAVRCRNRALDFCWQCGRIGVRTVACCQSGNDQRYPQ
FT                   SRGEREQCQTAPRH"
FT   SO_feature      CDS ; SO:0000316:<2214..5658
FT   SO_feature      start_codon ; SO:0000318:<1..2
FT                   /db_xref="FLYBASE:FBgn0027837; Dbuz\Osvaldo\pol"
FT                   /db_xref="SPTREMBL:Q9XZR7"
FT                   /protein_id="CAB39733.1"
FT                   /translation="WPRRGDAAERSPGGESSSCTKDWCHGTKDTHPKSIQSVPGVWPRR
FT                   TPSCQVPQQGTGLLLAMWTHRRAHRGLLPIGKRPAVPAVQGGAGAMPNSPKTLIGSLHD
FT                   EGHQLTAIVAIGAEQQKATIDTGASSSFISERLAKRLHGGGVVRATRRRIRLANGSCSE
FT                   VNSQLDLKIRLGSRQMEVPLLVLPGVIDDLVLGCDFLAGMGTPWNVAAWRSTIEPRNPQ
FT                   RSGRREAKLSVAIASGEIGHETPLDATQVDQKLIHADPEVDAFLRHELEKFQHVKGTTK
FT                   ITEHRITMQDTRPIKQRYFPKNPKMQAEINKQVDELLVKGCIEPSKSPHTRTYSNGQGR
FT                   KNGKWRLCVDFRQLNSRSIKDAYPLPRVHHILDQLREARYITSLDLKDGYWQIPMEKSS
FT                   RPLTAFTVPGKGLFQWKVMPFGLHSAPATFQRALDQVIGPDMMPHAFAYLDDIIVIGRT
FT                   RQEHMDNLREVFRRLRAANLRINIDKCDFFKKELKYLGHKVTENGIRTDPEKVAAIAQL
FT                   KPPTNVKELRQYVGVASWYRRYVPDFASTVHPLNALLKKGVKWEWTEEHQRAFETVKAK
FT                   LTESPVLACPDFSKPFCLQTDASNYGLGAILTQTSEEGERVISYASRTLNSAERNYSAT
FT                   EKECLAIIWGIRKLRPYLEGYHFIVITDHMALKWLNSIESPSGRIARWALELQQYDFEV
FT                   RYRKGKQNVVADALSRQPLEEDACCLAKSRETPDGTACRWLQRLRQDMRKAPQKFADYR
FT                   EEAGNIYRHIPHQAGHEDVAAWKLCVSTDRRKQVLKENHDAVTAGHLGSRKTIARVAAR
FT                   YYWPGMYRDVRNYVQRCEVCQRYKPSQLQAAGQMLTQVPEEPWATVCADFVGPLPRSKH
FT                   GNTMLLVFIDRFSKWTEMVPLRSANTAALQKAFRERILARFGAPKVLITDNGTQFTSRA
FT                   FKNFLDELGVRHQLTAPYTPQENPTERANRTVKTMIAQFAGSDQRCWDEALPELTLAVN
FT                   SSVSASTGYTAAFITQGREPRLPKTMFDAQTLGTGQEAQSPIERAAKMREVLEIVRRNL
FT                   ERAAQDQARITICGGGSGSRLLGTKCGRRNATCPMPRTDLQRSWHRDTEGHIRWSSLYR
FT                   RSSAGISSDAEKRTRTAHVADLKPWRGETGESQSGAEQAA"
FT   SO_feature      CDS ; SO:0000316:join(<5163..5623,6440..7746)
FT   SO_feature      start_codon ; SO:0000318:<1..2
FT                   /db_xref="FLYBASE:FBgn0027839; Dbuz\Osvaldo\env"
FT                   /db_xref="SPTREMBL:Q9XZR8"
FT                   /protein_id="CAB39734.1"
FT                   /translation="LTLAVNSSVSASTGYTAAFITQGREPRLPKTMFDAQTLGTGQEAQ
FT                   SPIERAAKMREVLEIVRRNLERAAQDQARITICGGGSGSRLLGTKCGRRNATCPMPRTD
FT                   LQRSWHRDTEGHIRWSSLYRRSSAGISSDAEKRTRTAHVADLKPWRGETGGQTRMRDKG
FT                   SIAAVLDDTVASRPAWKSATAEGVLEQADVHIPFDVDAPTTPAAKRPGLKTRARFETAY
FT                   YSELCEQRRSSNSTTSWKAHPADPRLLAAIRLERRPSTPCTNQGAGTTSRVRLPPVRLP
FT                   FHPRRRIRPNLRRHQPYLELEPSSSEESRSPASSSGTERRTSLEGTRDEWPEEVAQLAT
FT                   QLEAKGSSRTARIIWVRGVNTASAGHAWDVASSPSATMLVVVGRRKVWAPATRPVAATG
FT                   VTGGERGSGKSSCIGQRFRWSYAKTKRVLSLPFLNVTTPLTGLRTTPILTKVQQQPRKV
FT                   MAWSHPGVLKGIQSPSAVKNITVPAPRDEVCQLKDLAILPAHLRRSHPGAAITRGVFAA
FT                   APGVWAEAAAGPSGPGASIRHQLGLEEWKLTLKIRKRKLKKNIIFTYQQRTELPAANGK
FT                   QLVSSAALLTER"
XX
CC   Derived from AJ133521 (Rel. 60, Last updated, Version 2).
CC   Michael Ashburner, 17-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 9045 BP; 2492 A; 2233 C; 2712 G; 1608 T; 0 other;
     TGTGAGGAGC AATATAGGTA TGCACGTATG CAGTGTATAT GAACACATGT ATTTGCTGTG        60
     TGTTTATATG CACATACGTG CATGCATATA TTGCTCCACA CAGCGACGCG AACACTATAG       120
     GAGCAACCCT CGCGACTGGA AGGGTCAGAG AGCGGACTAT AGTCTGTCTC TCTCGCTCCT       180
     AAAGTGTCAG CAAATGGGCT CGCGTCGCTC ACCCGCGGGT CATAGGGCAC CGTTAGCCGA       240
     GGTACCGCTG CAAGTATTGG ATGCTCTCTC TTTGCATAGC AACAGCGGTA CTTCGGCCAA       300
     CGAAAAGCGG CCGCAATATT TGGCGGGCTG CTGGCGTCAC CCAGATCACG CCATTGTGCC       360
     GTTATGTGGG CACGAGCGGC AGGCAGGCCC CGCTCTAGAG CCGAACAGGG CCTGCGGCGG       420
     CCCTATAAAA GGGCACCGGC GGTGTCATAG AGGGCAATCA AGAATCGGAA TCAAGAATCG       480
     AGAGTGAAAC TAATGTGGAT CAAGAATCAA GAGTGAAGTG AGATTCAAGT GAAAGTGCAA       540
     GTACGAGGCA ACGCGAGTGA GGACACAAGA CATCGAAGGA CTACGATATC GACGCAGGAC       600
     ACCGATATCC AGGACTCGAA TCAGGCAGGA CATCGTGGGA GCATCCAAAG TATCCTGGGA       660
     GGATACTTCA GACGCCTAAT AAGGACCACC GACACGCAGA AGCAGCAGTG GCCATCAGCT       720
     AGAGAGTTGA TACAGGGCAG CTGCAACTCG TAGTCTGGTC AGAAGTCTCG TCACAGAATT       780
     GTGTAAGTTC ACGCAGCCGT GCGAATAGGT AGCAATTGTG CGCATAAGAA CCTAGGTGTG       840
     CCAAGAGCGA GTCCAGTAGT AGGAGTAGCC TGTACAGCCG AGCGAACCGC CGGAGTAGAC       900
     AGTGCAAATC CTGGCGTGAG CTGGAGCGCT TGGGCGAATC CTGGTGCTAC TGAGCCATAA       960
     TTGTCTGCCC AGCCGGAGTG CGTGAACAAA CATAACGCAC GACGACTATA CAAGTGTGAT      1020
     TATATCGCTA AATAATAATA AGTTTTATAA CGAGAATATA CCAAGTACCA AGCAAATTCA      1080
     CAAAGTGTTA TTATTCAAAA TCGCAAGGGC TTCAACAAAT AAATTTGTTG AAACGAATCC      1140
     ACAGTCGGCT GAAACTGGCC CGGCTTAGAC TCGGGTATAA CCGAAGGTTC GTTACAACTG      1200
     GCGCCCAACG TGGGGCCCTG CGATAAGAGA ATAAGCAATA ATTGTGAACA ATGGTGCGAG      1260
     CTTGGGTGTA TAATCTCAAA AAGGACGATG TGCTACGATA TGGTGACGAA TTCGGAGTCA      1320
     CGCTGTCGGG CACATTGGAC GTGATGCGGA GACAGTTCGG TGAGTGGGTG GAGACGAATG      1380
     AGGGAAGAAT TCCATATTCT CTCACCGTCG CCGAGCTGGC ACGACTGCAT GGACGCCGCC      1440
     CTTCGAACAG CGAGGATGTG CCAACGGTCA TCGTGGGAAA CGACCAGTAC GAGGAAGATC      1500
     CAAATGCGGC GCGGCAATCT CTGCCATCCA CCAGCGCTGC TGCGCGGCTG CAGCAGACAG      1560
     AGCAAGGAGC ATGGAGAGCC ACGTCTACAC CGCAGCCTGA AATAAGGACG CGAGGGCCAA      1620
     GCAGCTCAGA GCAGGAGTAT CCAAAGGTGG CCAAACACGT GAGGGAGTGG AACTTCCGGT      1680
     TCGATGGCAC CTCAAAGCCT TTGGAGTTCC TGGAGCAGGT GGAGTGGTCA GCAGACACCT      1740
     ATGGCCTGGA TCTGGATCTG ATCCCAAGAG CGATGCCAGA GCTACTGAAA GGCATGGCTC      1800
     TAAAGTGGTA CGTGGCCAAT AATAGGCACT GGAGGACGTG GGGAACCTTC GTGAGAAGCT      1860
     TCCAGGAGTT CTTCTTCGCC GAAGACTACT TGGAGGATCT CAAAGACGAG GTCAAGCGTC      1920
     GAAAGCAGAT GGTGGACGAG CCATTCAAGA TCTACATGGT GGAGATGCAG ACTCTCATGC      1980
     GGCCGCTGCG TTATGGGCCA GATCACGAGA TGAAGTTGAT TTACAACAAC AGCATCCCTG      2040
     ATCTGCGCGC CTACGCTCGG CCGTATCAGT TCCAGAGTCT GATGGAGCTG ATGAAGCTGG      2100
     CCGACGAGTT CGAGGAACTG GAACGAGACC GAGAGAGGTT GCGTCGGCTG CAGCGGCCAG      2160
     CACGAACGCG TCTAATGGCC ATGGAGGAGG ATGATGGCCA CGAAGAGGAG ATGCTGCGGA      2220
     GAGGAGCCCT GGAGGAGAGT CCTCGTCCTG CACCAAGGAC TGGTGCCACG GGACAAAGGA      2280
     CACACATCCC AAATCCATCC AGAGCGTGCC GGGTGTGTGG CCAAGAAGGA CACCGAGCTG      2340
     TCAGGTGCCG CAACAGGGCA CTGGACTTCT GCTGGCAATG TGGACGCATA GGCGTGCGCA      2400
     CCGTGGCCTG TTGCCAATCG GGAAACGACC AGCGGTACCC GCAGTCCAGG GGGGAGCGGG      2460
     AGCAATGCCA AACAGCCCCA AGACATTAAT TGGCAGCCTG CACGACGAAG GCCACCAACT      2520
     GACGGCGATT GTGGCCATTG GGGCCGAGCA GCAGAAAGCC ACGATCGATA CTGGAGCCTC      2580
     GAGCAGCTTT ATTAGCGAAA GGCTCGCCAA AAGGCTCCAT GGAGGGGGCG TGGTGCGCGC      2640
     CACAAGGCGG CGCATACGCC TGGCGAACGG CAGCTGCAGC GAGGTGAACT CGCAACTGGA      2700
     CCTAAAGATT AGACTGGGCA GTCGGCAAAT GGAAGTTCCA TTGCTGGTGC TGCCAGGCGT      2760
     AATCGACGAT CTGGTGCTGG GCTGCGATTT CTTGGCCGGC ATGGGAACAC CTTGGAATGT      2820
     GGCGGCTTGG CGCTCGACTA TCGAGCCAAG AAATCCACAG AGGAGTGGAC GACGGGAGGC      2880
     AAAGTTGTCA GTGGCAATTG CCAGTGGAGA AATAGGCCAC GAAACGCCAC TGGACGCGAC      2940
     TCAGGTGGAC CAGAAGCTGA TCCATGCGGA TCCGGAAGTG GATGCCTTTC TGAGGCACGA      3000
     ACTGGAGAAA TTCCAACACG TGAAAGGCAC CACCAAAATC ACGGAGCATC GGATCACCAT      3060
     GCAGGACACG CGGCCAATTA AACAGCGCTA CTTCCCCAAA AATCCGAAGA TGCAGGCGGA      3120
     GATCAATAAA CAGGTGGATG AGCTGCTCGT AAAAGGCTGC ATAGAGCCTT CCAAGAGCCC      3180
     ACACACGCGC ACCTATAGTA ATGGTCAAGG AAGAAAGAAT GGCAAATGGC GGCTGTGCGT      3240
     GGACTTTAGG CAGCTGAACA GCAGATCCAT CAAGGATGCA TACCCTCTGC CTCGTGTGCA      3300
     TCACATTTTG GATCAGCTGC GAGAGGCGCG CTATATCACG AGTCTGGATC TAAAGGATGG      3360
     ATATTGGCAA ATACCCATGG AGAAATCCAG TCGACCATTG ACAGCGTTCA CAGTCCCAGG      3420
     GAAAGGCCTG TTCCAGTGGA AGGTGATGCC GTTTGGCCTC CACTCGGCAC CTGCAACATT      3480
     CCAGCGAGCT CTAGACCAGG TCATCGGCCC TGACATGATG CCACACGCTT TTGCGTACCT      3540
     GGACGACATC ATCGTCATAG GCAGGACACG TCAGGAGCAC ATGGATAACC TGAGAGAGGT      3600
     GTTCCGGCGA CTGCGGGCAG CCAATTTGAG GATCAACATC GACAAGTGCG ATTTCTTCAA      3660
     AAAGGAGCTG AAGTACCTGG GTCATAAGGT CACAGAGAAT GGCATCCGCA CTGACCCAGA      3720
     GAAAGTAGCC GCGATTGCCC AGTTGAAGCC ACCCACTAAT GTCAAAGAGC TGAGACAATA      3780
     TGTGGGAGTG GCTTCATGGT ATCGTCGCTA TGTCCCAGAC TTCGCTTCCA CAGTGCATCC      3840
     GCTCAATGCA CTACTCAAAA AGGGCGTCAA ATGGGAGTGG ACAGAGGAGC ATCAAAGGGC      3900
     GTTCGAGACT GTGAAGGCCA AGCTGACGGA ATCACCTGTC TTGGCATGCC CTGATTTCTC      3960
     GAAGCCATTT TGCTTGCAAA CGGATGCAAG TAACTATGGA CTGGGAGCAA TCCTGACGCA      4020
     AACATCGGAG GAAGGGGAGC GCGTCATTTC GTATGCCAGC CGGACACTTA ACAGTGCTGA      4080
     GAGAAACTAC TCAGCCACTG AAAAGGAGTG TCTGGCCATA ATCTGGGGCA TACGCAAACT      4140
     CAGGCCATAC CTGGAAGGCT ATCACTTCAT AGTGATCACG GACCATATGG CGCTGAAGTG      4200
     GCTCAACTCC ATCGAGAGCC CTTCAGGAAG GATTGCCAGA TGGGCGCTGG AGCTTCAGCA      4260
     ATACGACTTC GAGGTTCGCT ACCGGAAAGG CAAACAAAAT GTCGTAGCTG ATGCGCTGTC      4320
     ACGGCAGCCG CTGGAGGAGG ACGCATGCTG CTTGGCCAAG AGCAGAGAGA CGCCAGATGG      4380
     GACAGCATGT CGCTGGCTAC AAAGGCTGCG CCAGGATATG CGGAAAGCCC CGCAGAAGTT      4440
     CGCAGACTAT AGAGAGGAGG CTGGAAACAT ATACCGGCAC ATTCCGCACC AAGCCGGCCA      4500
     CGAGGATGTG GCTGCATGGA AGCTGTGCGT GTCAACAGAT AGGCGCAAAC AGGTGTTGAA      4560
     GGAGAACCAC GACGCTGTCA CTGCTGGCCA CCTTGGGAGC AGAAAAACCA TTGCTCGGGT      4620
     GGCAGCGAGG TATTACTGGC CAGGCATGTA CCGGGATGTG CGCAACTACG TGCAGCGGTG      4680
     CGAGGTGTGC CAGCGCTACA AGCCCAGTCA GCTGCAGGCA GCTGGTCAAA TGCTGACACA      4740
     AGTGCCCGAG GAGCCATGGG CAACCGTATG CGCTGATTTC GTGGGTCCGT TACCGAGGTC      4800
     GAAGCATGGG AATACGATGC TACTGGTATT CATCGATCGA TTCTCGAAGT GGACGGAGAT      4860
     GGTGCCTTTG AGGAGCGCGA ACACGGCGGC GCTGCAAAAG GCGTTCCGCG AGAGAATCTT      4920
     GGCTAGATTT GGCGCACCAA AGGTACTCAT AACGGACAAT GGCACCCAAT TCACCAGTCG      4980
     AGCCTTCAAG AACTTTTTGG ACGAGCTGGG AGTGCGGCAC CAGTTGACGG CGCCATACAC      5040
     ACCGCAAGAA AATCCGACCG AGAGGGCCAA CAGGACAGTG AAGACGATGA TCGCGCAATT      5100
     TGCTGGCAGC GATCAAAGGT GCTGGGATGA GGCTCTGCCA GAGTTGACGC TGGCAGTCAA      5160
     CAGCAGCGTG TCGGCATCTA CCGGGTACAC GGCAGCATTC ATCACGCAAG GGCGAGAGCC      5220
     GAGGCTGCCC AAAACCATGT TTGACGCACA AACTCTTGGG ACGGGCCAGG AGGCACAGAG      5280
     TCCCATAGAG AGGGCAGCCA AGATGCGAGA AGTCTTGGAG ATTGTGCGTC GAAACCTGGA      5340
     GAGAGCTGCC CAGGACCAGG CGCGCATTAC AATCTGCGGC GGAGGCAGTG GAAGCCGGCT      5400
     ATTGGGGACA AAGTGTGGGC GAAGGAACGC CACTTGTCCA ATGCCGCGGA CGGATTTGCA      5460
     GCGAAGCTGG CACCGCGATA CGGAGGGCCA TATACGGTGG TCAAGTTTGT ATCGCCGGTC      5520
     ATCTGCCGGC ATCAGCTCGG ATGCCGAAAA GCGAACCCGG ACCGCGCATG TGGCTGACTT      5580
     GAAGCCATGG AGAGGCGAGA CGGGTGAGTC GCAAAGCGGG GCAGAGCAAG CCGCCTAGTA      5640
     AAATTTTCAA AAAAAAAAAA AAAAAAAAGA GTGAATGCAC ATCGCGATGT GCATTGCTTT      5700
     TAAGACACCT AAAAACGAAG AAAAATTTGG AATTTTACGA GAAGCAAACA GTTGGAACTG      5760
     TTAACTGGGT GACGCGCAAC AACAAATTTT TAAATAACGC GCGCACTGCA GTGGAAGCGA      5820
     ACAGTTAAAA CTGTTAGCTA AGTGACGCGC AACAACAAAA TTTTAAATTG CCGCGCGCAC      5880
     TGTTACGTAC GTAACAACAA CACACACAAC AAACAAGCGT ACGAAACAAC AACACGCTCA      5940
     GCTGACAAGA GTTGGACGCG CACGCATAAA CATAAACAAC AACAAGTATG CAAGCAGCGC      6000
     ACAACAAATA ACACACACAG CTGAGTACGA ACGAGCGTGT GCAAGAGCCG GAGAAGGTCA      6060
     AGGGCCTCGC GAGAGCGAGA GAGCGCAGCG AGCATCGGTT GGCTCGGCGA GAGCGCGAGC      6120
     GAGTGCAGCG AGCATCGGTT GGCTCGCGAG AGGCGAGCGA GTGCAGCGAG CATCCGTTAG      6180
     CTTGAGAGAG GCGAGCGATC GCACAGCGCA CCGCCGTTAG CTCGAGAGAG GCAAGCAACA      6240
     ACAAAATGCA TGACATGCAA AACAGCCAGC AACAAAAGGC ACGCAGCATA CAAAACGGGC      6300
     AACAACAACA TGCGTAGGCG CGGTAACCCA GTGAACAATT TGCATAGTGC ATTTAACACA      6360
     GGCAACAACT ATGCAAGGCA AGAGAGAGCG TGCAAAGGCA TAGACTGCGT TTCCCACAGG      6420
     TGGGCAGACG AGGATGCGGG ACAAGGGGAG CATTGCAGCG GTACTGGACG ATACCGTAGC      6480
     GAGTCGGCCT GCCTGGAAGT CAGCAACTGC GGAGGGTGTG CTAGAGCAGG CCGACGTGCA      6540
     TATCCCGTTC GACGTTGACG CGCCTACGAC GCCGGCAGCG AAGCGGCCGG GGTTAAAAAC      6600
     GCGAGCACGC TTCGAGACGG CCTACTATTC GGAATTATGC GAACAAAGGA GAAGCTCAAA      6660
     TTCAACAACG TCCTGGAAGG CACACCCGGC CGATCCGCGA CTGCTGGCCG CGATTCGTCT      6720
     GGAGCGGCGT CCGAGCACGC CGTGTACCAA CCAGGGCGCG GGCACGACGA GCCGAGTGCG      6780
     CCTGCCACCG GTCAGGCTTC CGTTCCACCC GCGACGACGC ATTCGCCCGA ACCTGAGGCG      6840
     GCATCAGCCG TATCTGGAGC TGGAGCCATC TTCCAGCGAG GAATCGAGGT CGCCGGCCAG      6900
     CTCCAGCGGC ACAGAGCGGA GGACGTCTTT GGAGGGGACG CGAGATGAAT GGCCAGAAGA      6960
     GGTGGCCCAA TTGGCGACGC AGCTAGAGGC AAAGGGCAGC AGTCGGACCG CGCGCATCAT      7020
     CTGGGTGAGA GGCGTGAACA CCGCATCCGC CGGACACGCT TGGGATGTCG CGTCTTCACC      7080
     CAGCGCTACG ATGTTGGTTG TTGTTGGTCG ACGGAAAGTG TGGGCGCCTG CCACGCGGCC      7140
     GGTCGCGGCA ACTGGCGTGA CGGGTGGAGA AAGGGGCTCT GGCAAATCCT CGTGCATTGG      7200
     CCAGCGATTC CGCTGGAGCT ATGCGAAGAC GAAGAGAGTG TTGTCATTGC CATTTCTCAA      7260
     CGTCACGACG CCGTTGACCG GTTTGCGAAC GACGCCGATA CTAACCAAAG TCCAACAGCA      7320
     ACCCAGGAAA GTGATGGCGT GGTCCCATCC AGGAGTCCTG AAGGGCATCC AGAGCCCATC      7380
     AGCAGTCAAG AACATAACCG TTCCAGCGCC GAGGGACGAG GTGTGCCAAT TGAAAGATTT      7440
     GGCCATCTTA CCTGCGCACC TGCGCCGCAG CCACCCGGGG GCTGCAATCA CGAGAGGAGT      7500
     GTTTGCAGCA GCGCCCGGCG TGTGGGCAGA GGCGGCGGCA GGTCCATCGG GTCCAGGGGC      7560
     ATCAATAAGG CATCAACTCG GGCTGGAGGA GTGGAAGTTA ACGTTAAAAA TACGCAAGAG      7620
     AAAATTAAAA AAAAACATCA TATTCACTTA CCAGCAACGC ACGGAGTTGC CAGCAGCGAA      7680
     CGGGAAACAG CTGGTGAGCA GCGCGGCGCT GTTAACAGAG CGTTAACAGC AATGATCGAC      7740
     GCGCGTATAG AGCACGCGTG TCATCGATAA CGCAAGGTGG AGCAGCAAGG AGAAAAGAGG      7800
     CGCGGAATTC AAAAACACGA AGGTCGTGTT TTCCGAAGGA AGAGGGGAGT GTGAGGAGCA      7860
     ATATAGGTAT GCACGTATGC AGTGTATATG AACACATGTA TTTGCTGTGT GTTTATATGC      7920
     ACATACGTGC ATGCATATAT TGCTCCACAC AGCGACGCGA ACACTATAGG AGCAACCCTC      7980
     GCGACTGGAA GGGTCAGAGA GCGGACTATA GTCTGTCTCT CTCGCTCCTA AAGTGTCAGC      8040
     AAATGGGCTC GCGTCGCTCA CCCGCGGGTC ATAGGGCACC GTTAGCCGAG GTACCGCTGC      8100
     AAGTATTGGA TGCTCTCTCT TTGCATAGCA ACAGCGGTAC TTCGGCCAAC GAAAAGCGGC      8160
     CGCAATATTT GGCGGGCTGC TGGCGTCACC CAGATCACGC CATTGTGCCG TTATGTGGGC      8220
     ACGAGCGGCA GGCAGGCCCC GCTCTAGAGC CGAACAGGGC CTGCGGCGGC CCTATAAAAG      8280
     GGCACCGGCG GTGTCATAGA GGGCAATCAA GAATCGGAAT CAAGAATCGA GAGTGAAACT      8340
     AATGTGGATC AAGAATCAAG AGTGAAGTGA GATTCAAGTG AAAGTGCAAG TACGAGGCAA      8400
     CGCGAGTGAG GACACAAGAC ATCGAAGGAC TACGATATCG ACGCAGGACA CCGATATCCA      8460
     GGACTCGAAT CAGGCAGGAC ATCGTGGGAG CATCCAAAGT ATCCTGGGAG GATACTTCAG      8520
     ACGCCTAATA AGGACCACCG ACACGCAGAA GCAGCAGTGG CCATCAGCTA GAGAGTTGAT      8580
     ACAGGGCAGC TGCAACTCGT AGTCTGGTCA GAAGTCTCGT CACAGAATTG TGTAAGTTCA      8640
     CGCAGCCGTG CGAATAGGTA GCAATTGTGC GCATAAGAAC CTAGGTGTGC CAAGAGCGAG      8700
     TCCAGTAGTA GGAGTAGCCT GTACAGCCGA GCGAACCGCC GGAGTAGACA GTGCAAATCC      8760
     TGGCGTGAGC TGGAGCGCTT GGGCGAATCC TGGTGCTACT GAGCCATAAT TGTCTGCCCA      8820
     GCCGGAGTGC GTGAACAAAC ATAACGCACG ACGACTATAC AAGTGTGATT ATATCGCTAA      8880
     ATAATAATAA GTTTTATAAC GAGAATATAC CAAGTACCAA GCAAATTCAC AAAGTGTTAT      8940
     TACTCAAAAT CGCAAGGGCT TCAACAAATA AATTTGTTGA AACGAATCCA CAGTCGGCTG      9000
     AAACTGGCCC GGCTTAGACT CGGGTATAAC CGAAGGTTCG TTACA                      9045
//
ID   DK29466    standard; DNA; INV; 979 BP.
XX
AC   U29466;
XX
DR   FLYBASE; FBgn0014755; Dkoe\Gandalf.
XX
FT   source          U29466:51..1029
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..12
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:967..979
XX
CC   Derived from U29466 (Rel. 63, Last updated, Version 5).
CC   Michael Ashburner, 17-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 979 BP; 305 A; 150 C; 173 G; 351 T; 0 other;
     CAGTGCTGCC AGTTTGGCAA TTTAGTGGCT AGATCTGGCC ACTTTTAAAA AAATTTGCAA        60
     CTTTTATTTT GTAAATGCTA TTAGCCACAA ATCTAGCAAT TTTAAATTAT TTTTTAGCAA       120
     TTTCAGCAAC TTTATTATAA AACTAGCAAT TCGTATATTT TTCTTCAGTG ATTTTGCATT       180
     TCTTATGCCT TTTTACGATT ACGATATAGG AACTTGTATT TAACCCAGTT GTTCGATTAT       240
     ATGAACTAGT TTATGGTGTT TGAAAACTCT TTAAATGTGA TTGGTGAACA AGAACAAGAT       300
     GCCGAAAGCT AATAAGCAAA GTTTTCGTGA TGCCTGGCTG CAAGATGACG AGTTCAAGCA       360
     ATGGATTCGT AAGGATTGCA CTGATCAAAC ACGAGCTTAT TGCGCGTATC GCCAATCAAC       420
     TATTAACGTA AAGCTTTTTG ACATCCGCCA CCACAGTGCG TCAAAAAAAA AAAAAAAAAA       480
     AATGAGACTG TGATAGGCGT ATGTACCCAA AAGAATAAGT TGCCTTTTGT TAGAAAATCA       540
     ACCAAAACCG AGGAGCAGGA AGCAACATTA TCCTTGCATA TTGCTCAGCA CACGGCGATT       600
     GCCGGCGATT ACAGGTATGG ACTAGAGCGT CATGAAAAGT ATTGCCATAA CTATGATCTG       660
     ACATATGAGT ACTTGATTCA AATTACTGGT AGTGCGAGGT ACGCTACTGA ATGTGACGCT       720
     GAGGAACTGG AAAATAATTT AAGTATTACT TAGTTATTAT TTAGTTTCAC TTTTTAGTTT       780
     TTTAGTTTCA ATTTTTATTA AGTTGTTTCT AATTTGTATT TGTTTTTTGT TTGAAAATAT       840
     ATATGTATAT TTGTTAAATA TCAAAATTTT AATGGTTTAG CAATTTTTTT TGGCAATTTT       900
     CACAACATTT TTAGCTATTT TTAGCCATTT TTTTTTTCCA AATCTAGCAA TTTTTGCTTA       960
     GGAGATTCTG GCAGCACTG                                                    979
//
ID   DMMAR      standard; DNA; INV; 1286 BP.
XX
AC   M14653;
XX
DR   FLYBASE; FBgn0002651; Dmau\mariner.
XX
FT   source          M14653:1..1286
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..28
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1259..1286
FT   SO_feature      CDS ; SO:0000316:172..1209
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0013835; Dmau\mariner\T"
FT                   /protein_id="AAA28678.1"
FT                   /translation="MSSFVPNKEQTRTVLIFCFHLKKTAAESHRMLVEAFGEQVPTVKK
FT                   CERWFQRFKSGDFDVDDKEHGKPPKRYEDAELQALLDEDDAQTQKQLAEQLEVSQQAVS
FT                   NRLREMGKIQKVGRWVPHELNERQMERRKNTCEILLSRYKRKSFLHRIVTGDEKWIFFV
FT                   SPKRKKSYVDPGQPATSTARPNRFGKKTMLCVWWDQSGVIYYELLKRGETVNTARYQQQ
FT                   LINLNRALQRKRPEYQKRQHRVIFLHDNAPSHTARAVRDTLETLNWEVLPHAAYSPDLA
FT                   PSDYHLFASMGHALAEQRFDSYESVKKWLDEWFAAKDDEFYWRGIHKLPERWEKCVASD
FT                   GKYLE"
XX
CC   Derived from M14653 (Rel. 63, Last updated, Version 2).
CC   Michael Ashburner, 17-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
CC   [Not convinced best element, see transposons/mau_mariner.clustal]
XX
SQ   Sequence 1286 BP; 399 A; 270 C; 304 G; 313 T; 0 other;
     ccaggtgtac aagtagggaa tgtcggttcg aacatataga tgtctcgcaa acgtaaatat        60
     ttaccgattg tcataaaact ttgaccttgt gaagtgtcaa ccttgactgt cgaaccacca       120
     tagtttggcg caaattgagc gtcataattg ttttctctca gtgcagtcaa catgtcgagt       180
     ttcgtgccga ataaagagca aacgcggaca gtattaattt tctgttttca tttgaagaaa       240
     acagctgcgg aatcgcaccg aatgcttgtt gaagcctttg gcgaacaagt accaactgtg       300
     aaaaagtgtg aacggtggtt tcaacgcttc aaaagtggtg attttgacgt cgacgacaaa       360
     gagcacggaa aaccgccaaa aaggtacgaa gacgccgaac tgcaagcatt attggatgaa       420
     gacgatgctc aaacgcaaaa acaactcgca gagcagttgg aagtaagtca acaagcagtt       480
     tccaatcgct tgcgagagat gggaaagatt cagaaggtcg gtagatgggt gccacatgag       540
     ttgaacgaga ggcagatgga gaggcgcaaa aacacatgcg aaattttgct ttcacgatac       600
     aaaaggaagt cgtttttgca tcgtatcgtt actggcgatg aaaaatggat cttttttgtt       660
     agtcctaaac gtaaaaagtc atacgttgat cctggacaac cggccacatc gactgctcga       720
     ccgaatcgct ttggcaagaa gacgatgctc tgtgtttggt gggatcagag cggtgtcatt       780
     tactatgagc tcttgaaacg cggcgaaacg gtgaatacgg cacgctacca acaacaattg       840
     atcaatttga accgtgcgct tcagagaaaa cgaccggaat atcaaaaaag acaacacagg       900
     gtcatttttc tccatgacaa cgctccatca catacggcaa gagcggttcg cgacacgttg       960
     gaaacactca attgggaagt gcttccgcat gcggcttact caccagacct ggccccatcc      1020
     gattaccacc tattcgcttc gatgggacac gcactcgctg agcagcgctt cgattcttac      1080
     gaaagtgtga aaaaatggct cgatgaatgg ttcgccgcaa aagacgatga gttctactgg      1140
     cgtggaatcc acaaattgcc cgagagatgg gaaaaatgtg tagctagcga cggcaaatac      1200
     ttagaataaa tgattttttc tttttccaca aaatttaacg tgtttttgat taaaaaaaaa      1260
     acgacatttc atacttgtac acctga                                           1286
//
ID   DHMINOS    standard; DNA; INV; 1773 BP.
XX
AC   Z29098;
XX
DR   FLYBASE; FBgn0010242; Dhyd\Minos.
XX
FT   source          Z29098:15..1787
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..253
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1519..1773
FT   SO_feature      CDS ; SO:0000316:join(332..745,806..1477)
FT                   /db_xref="FLYBASE:FBgn0013814; Dhyd\Minos\T"
FT                   /protein_id="CAA82359.1"
FT                   /translation="MSQYSMQKNFRLLQISRSLATMVRGKPISKEIRVLIRDYFKSGK
FT                   TLTEISKQLNLPKSSVHGVIQIFKKNGNIENNIANRGRTSAITPRDKRQLAKIVKADR
FT                   RQSLRNLASKWSQQLAKLSSESGRDKLKSIGYGFYKAKEKPLLTLRQKKKRLQWARER
FT                   MSWTQRQWDTIIFSDEAKFDVSVGDTRKRVIRKRSETYHKDCLKRTTKFPASTMVWGC
FT                   MSAKGLGKLHFIEGTVNAEKYINILQDSLLPSIPKLLDCGEFTFQQDGASSHTAKRTK
FT                   NWLQYNQMEVLDWPSNSPDLSPIENIWWLMKNQLRNEPQRNISDLKIKLQEMWDSISQ
FT                   EHCKNLLSSMPKRVKCVMQAKGDVTQF"
XX
CC   Derived from Z29098.
CC   Michael Ashburner, 17-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 1773 BP; 626 A; 299 C; 342 G; 506 T; 0 other;
     CGAGCCCCAA CCACTATTAA TTCGAACAGC ATGTTTTTTT TGCAGTGCGC AATGTTTAAC        60
     ACACTATATT ATCAATACTA CTAAAGATAA CACATACCAA TGCATTTCGT CTCAAAGAGA       120
     ATTTTATTCT CTTCACGACG AAAAAAAAAG TTTTGCTCTA TTTCCAACAA CAACAAAAAT       180
     ATGAGTAATT TATTCAAACG GTTTGCTTAA GAGATAAGAA AAAAGTGACC ACTATTAATT       240
     CGAACGCGGC GTAAGCTTAC CTTAATCTCA AGAAGAGCAA AACAAAAGCA ACTAATGTAA       300
     CGGAATCATT ATCTAGTTAT GATCTGCAAA TAATGTCACA ATACAGCATG CAAAAAAATT       360
     TTAGATTGCT GCAGATCAGT AGAAGTTTAG CAACGATGGT TCGTGGTAAA CCTATTTCTA       420
     AAGAAATCAG AGTATTGATT AGGGATTATT TTAAATCTGG AAAGACACTT ACGGAGATAA       480
     GCAAGCAATT AAATTTGCCT AAGTCGTCTG TGCATGGGGT GATACAAATT TTCAAAAAAA       540
     ATGGGAATAT TGAAAATAAC ATTGCGAATA GAGGCCGAAC ATCAGCAATA ACACCCCGCG       600
     ACAAAAGACA ACTGGCCAAA ATTGTTAAGG CTGATCGTCG CCAATCTTTG AGAAATTTGG       660
     CTTCTAAGTG GTCGCAGCAA TTGGCAAAAC TGTCAAGCGA GAGTGGACGC GACAAATTAA       720
     AAAGTATTGG ATATGGTTTT TATAAAGTAT GTTTTGTTAT TACCTGTGCA TCGTACCCAA       780
     TAACTTACTC GTAATCTTAC TCGTAGGCCA AGGAAAAACC CTTGCTTACG CTTCGTCAAA       840
     AAAAGAAGCG TTTGCAATGG GCTCGGGAAA GGATGTCTTG GACTCAAAGG CAATGGGATA       900
     CCATCATATT CAGCGATGAA GCTAAATTTG ATGTTAGTGT CGGCGATACG AGAAAACGCG       960
     TCATCCGTAA GAGGTCAGAA ACATACCATA AAGACTGCCT TAAAAGAACA ACAAAGTTTC      1020
     CTGCGAGCAC TATGGTATGG GGATGTATGT CTGCCAAAGG ATTAGGAAAA CTTCATTTCA      1080
     TTGAAGGGAC AGTTAATGCT GAAAAATATA TTAATATTTT ACAAGATAGT TTGTTGCCAT      1140
     CAATACCAAA ACTATTAGAT TGCGGTGAAT TCACTTTTCA GCAGGACGGA GCATCATCGC      1200
     ACACAGCCAA GCGAACCAAA AATTGGCTGC AATATAATCA AATGGAGGTT TTAGATTGGC      1260
     CATCAAATAG TCCAGATCTA AGCCCAATTG AAAATATTTG GTGGCTAATG AAAAACCAGC      1320
     TTCGAAATGA GCCACAAAGG AATATTTCTG ACTTGAAAAT CAAGTTGCAA GAGATGTGGG      1380
     ACTCAATTTC TCAAGAGCAT TGCAAAAATT TGTTAAGCTC AATGCCAAAA CGAGTTAAAT      1440
     GCGTAATGCA GGCCAAGGGC GACGTTACAC AATTCTAATA TTAATTAAAT TATTGTTTTA      1500
     AGTATGATAG TAAATCACAT TACGCCGCGT TCGAATTAAT AGTGGTCACT TTTTTCTTAT      1560
     CTCTTAAGCA AACCGTTTGA ATAAATTACT CATATTTTTG TTGTTGTTGG AAATAGAGCA      1620
     AAACTTTTTT TTTCGTCGTG AAGAGAATAA AATTCTCTTT GAGACGAAAT GCATTGGTAT      1680
     GTGTTATCTT TAGTAGTATT GATAATATAG TGTGTTAAAC ATTGCGCACT GCAAAAAAAA      1740
     CATGCTGTTC GAATTAATAG TGGTTGGGGC TCG                                   1773
//
ID   DFU309320  standard; DNA; INV; 928 BP.
XX
AC   AJ309320;
XX
DR   FLYBASE; FBgn0044997; Dfun\Isfun-1.
XX
FT   source          AJ309320:1..928
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..14
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:915..928
XX
CC   Derived from AJ309320 (Rel. 68, Last updated, Version 1).
CC   Michael Ashburner, 17-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 928 BP; 276 A; 181 C; 175 G; 296 T; 0 other;
     ttataccctg tacagggata tattaacttt gtgaaaaaaa ttgttgtaac aggcagaagg        60
     aggcatctat gaccctataa agtatatata ttcttgatca gtatcaacag ccgagtcgat       120
     tgagccatgt ccgtctgtct gtctgtccgt ccgtccgtct gtccgactgt atgtacgcgt       180
     cgatctcagc aactattaga gctagagaca ccaaatttgg catgaaggtt cctctatacc       240
     atacgcagat caagtttatt ttaaattttg gatacccatc ccgcgcaaaa aattagagtt       300
     tcaaaagggt attctttaaa caccttaaac accttcgaaa aggctaaagt cgaccgcatt       360
     cgacagtata ataccctgta caggcttcta tattagaatt atgttgataa taggtacttt       420
     gattaaaata aaagtaagaa cataacaggt gtttaaagaa tacctctttg aaactctcat       480
     tttttgcata cgaattcttt gcatgcttat agcagctaac tttcacatat ttatacatat       540
     tcaattaaaa gctgagtgtt acgacactta atttacttat gcttgtgtcg cagtagttcg       600
     ctatctcgct cgcacaaata tgcacacatg gtaagcagac gcatgtgtca tagtcgttcg       660
     ctgtctcgct cgcacacatg tgctgcctgc cgctctacga ttccgtggaa aaataacttt       720
     tattgctgat tatctgatga aactttcagc gttccttcta tatatcattc ttaacgcacc       780
     tgttaagtaa gaagtgtata cgttgaaaaa tgtggctatt attcgttttt tttcaatttg       840
     cgggggaagg gggggaggta tccaaaatgt aaaataaact tgatctgcgt atggtataca       900
     ggaaccttta tgcctgtaca gggtataa                                          928
//
ID   U73803     standard; DNA; INV; 5540 BP.
XX
AC   U73803;
XX
DR   FLYBASE; FBgn0023239; Dsub\bilbo.
XX
FT   source          U73803:536..6065
FT   SO_feature      CDS ; SO:0000316:<464..1865
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:;"
FT                   /db_xref="SPTREMBL:O46183"
FT                   /protein_id="AAB92392.1"
FT                   /translation="RRALPGWTVPLLCSSWEPYGEIIKYCKQNQKRERHSPNACREKSQ
FT                   AGEGSGPKAGPIRSDAGKTCTVKDAGMNPGGSHPKPGMGGKSTPKTDTMVGQLSNIAAA
FT                   QPSGEAAGEDLPSTSVQAKKYSYAEKRSAGHILRRQNASQEVSPTADWLKKVEWASTVL
FT                   PNFSVEPQKVAAQQKRQRSQETPGPAAKRSRILPNVSFAQIAKERTLIGVLDKGSAEGK
FT                   IPRSQWKWVEAALADRCFELLEKDPGPPPVCKDMGWFQGNIKVVACEDERSVKLYKAAV
FT                   AQIGEVYAGAKLVAVDWSEVPSRPRARIWVPATFKEPERILTMLQRCNPTLPTSDWKVA
FT                   KVEASKGPTNQAVVILNKESLAPIEAARGELNFGFSSVTMKVYKSDAAAEARSANKPVE
FT                   QDVASEIEAPEVDPEPEPALESYSSETELLLDFEAMCRDDILDDSDADITVVENVSNEV
FT                   SEASADKSPPL"
FT   SO_feature      CDS ; SO:0000316:<1801..3465
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:;"
FT                   /db_xref="SPTREMBL:O46184"
FT                   /protein_id="AAB92393.1"
FT                   /translation="QWWRMFLMKSLRLLQINLHHCKAASAALILRLVASGGDIVLIQEP
FT                   WVVGGRVCGLATKDYNLIVAQTEGKIRTCILARKHLNIFLLHNFSNGDNTAASLELQGT
FT                   RLNLVSSYMAHEESDPPSDLVRKIVSDSERSDTSLLIGCDANAHHTQWGSSDTNVRGES
FT                   LFSFILNSNLFIGNRGNDPTFIIKNRQEVIDLTLLSHKLLDTIKSWRVLEDHSFSDHRY
FT                   IETTLSLESTIPTSYVNPRKTNWDTYSAKMEELLPPLAPKCPDTQDDFNRLVDNFTEAC
FT                   NKAFMAACPSTKPRGKKKPPWWSKHIDTLRKDCRTLFNRAKSSSEVAHWENYKSKLTLY
FT                   KKETRRAKRASWHKFCSEIEDTSEAARLRKVLSKTSPSVGYLKRTDGTWTNSSEDSLHI
FT                   LLETHFPGCTTIEPADTPSEGPETSMGHILTKRNISWAVNSFKSYKSPGPDQVIPAQLQ
FT                   KAGDVAINWLQSIFRKILTVGKIPRAWLKAKIVFIPKAGKPSHTTPKDFRPISLSSFLL
FT                   KTFERLVGLQLRKTIKPQAVRRSTCLPKREIHGNGTP"
FT   SO_feature      CDS ; SO:0000316:<3386..5413
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:;"
FT                   /db_xref="SPTREMBL:O46185"
FT                   /protein_id="AAB92394.1"
FT                   /translation="GKPLNLRLSGAQHAYRKGKSTETALHEVISAVEKSLHVKEYSLIA
FT                   FLDIEGAFNNVIPGAITEALTDLGVDRHLVMLIDQLLTCRTVTSSMGSSTQSRYVNRGT
FT                   PQGGVLSPLLWNIAVNKILCDLEGEGCKVVAYADDVAIIFSGKFPQTLCELMTAKLARL
FT                   SEWTKSRGLGINPSKTELVLFTNKYKIPPLNPPILNGCRLSFSDSASYLGLVIDKKLSW
FT                   NLSIKDRVKKATIALYTCKKAIGLKWGMNPRIVQWIYLAIVRPILLYGVTVWWTALSKG
FT                   TITKQLSKVQRTAALSISGALSTTPTDALNAILCLQSPELAGKEQAEMAAIRLRDSDQW
FT                   VSQRTGHASILNGNNIVPAKTDYCVPREYTDTPFETIIPHRNDWLEGPPGPKEAIQIFT
FT                   DGSKLDNKVGGGIYSELLNISYSFRLPDHCSVFQAEVIAIKEALSCLQELTPEATYINI
FT                   YSDSQAAIKSLNAITTSSATVANCRKSLHEMAYQFVISLIWVPGHQDIEGNCIADELAR
FT                   AGTTIPLLNDKEDIRMPMATCKLRIKEHFKKLTNDRWQTVPLCRITRQTWPNINRKRTD
FT                   ELCKLSRSRCSSVIRSLTGHWLIGTHANRLGAPYNDFCRSCRDEDEEETVEHLFCSCPA
FT                   LSRRRLQYLGSPFLNDISDMSTISPRRIAGFIRASGWDNG"
XX
CC   Derived from U73803 (Rel. 54, Last updated, Version 1).
CC   Michael Ashburner, 17-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 5540 BP; 1604 A; 1460 C; 1407 G; 1069 T; 0 other;
     TCTATTTACG TCCGATGATC CTATTGGGCT TTGAGGTGGC TCAGAGGGGG CCTAGCTGAG        60
     GCCACCGGAC GGGTCGCAGG TTGCGGATAG CGAACGGCCT ACCCCAGTGG GTAGGTCAGC       120
     TGTGAATAGG CGGGCATCCT AAAGAGCATC AACTAAGTTG GCTCTGAGGG AGAGTACCGA       180
     AATAAGCAGT CCCGGACAGC CAGCGGGTGT TCGCGACGCA GCAACACTGA CGATGCGCTT       240
     GTGGTGCCGC CTCTCATTAA GTAGCTCACA CAATCCCATC CCTACACAAC ACCTACCCAC       300
     ATCCTAGCCC CAACACTCAC CTCACACCGG GCCGGACTAA GGTGTCACTC GACCCGTGCC       360
     AAGAGTCAGC CTGGCTGGGG GCCCGGTATA AACACTAGCC CAGTCGTGAA CGGAGAGCTC       420
     AGGGATTTGG CAGCCCCCTG TTCTAATTAT GCCTTACCCG GGTAACGCAG AGCTCTGCCG       480
     GGGTGGACCG TTCCCCTTCT CTGCAGCTCG TGGGAACCAT ATGGAGAAAT CATTAAATAT       540
     TGTAAACAAA ACCAAAAACG AGAGAGGCAC TCCCCAAATG CCTGCAGGGA GAAATCCCAA       600
     GCGGGAGAAG GCAGCGGCCC AAAGGCTGGC CCGATCCGCT CAGACGCAGG AAAGACCTGC       660
     ACGGTGAAGG ACGCGGGTAT GAATCCGGGT GGATCCCATC CCAAACCTGG GATGGGTGGA       720
     AAGTCAACAC CCAAAACTGA TACCATGGTA GGGCAGCTAA GCAATATTGC GGCTGCCCAA       780
     CCTTCCGGTG AAGCGGCGGG TGAGGACTTG CCATCTACCA GCGTCCAAGC CAAAAAGTAT       840
     AGCTATGCCG AAAAGAGAAG TGCTGGGCAC ATACTCCGTC GGCAGAACGC CAGCCAAGAA       900
     GTCAGTCCGA CAGCAGACTG GCTGAAAAAA GTAGAATGGG CCTCGACGGT GTTGCCCAAC       960
     TTCAGTGTGG AGCCACAGAA GGTGGCCGCA CAACAGAAGA GGCAACGCTC TCAAGAGACG      1020
     CCCGGACCTG CCGCGAAGCG ATCCAGGATT CTACCAAACG TATCCTTCGC GCAGATTGCC      1080
     AAGGAGAGGA CGCTGATAGG CGTTCTCGAT AAAGGCAGCG CGGAGGGGAA AATACCCAGA      1140
     AGCCAATGGA AGTGGGTGGA AGCGGCACTG GCCGACCGCT GCTTCGAGCT TCTAGAGAAG      1200
     GATCCCGGGC CACCCCCAGT CTGCAAGGAC ATGGGATGGT TCCAGGGAAA TATAAAAGTG      1260
     GTAGCCTGCG AGGATGAGCG CTCCGTGAAG CTATACAAAG CTGCGGTGGC GCAAATCGGT      1320
     GAGGTCTACG CAGGGGCGAA GCTCGTCGCT GTAGACTGGA GCGAGGTGCC AAGTAGGCCA      1380
     AGAGCCCGTA TATGGGTACC GGCCACTTTC AAGGAGCCCG AGCGGATCCT AACGATGTTG      1440
     CAGAGATGCA ACCCCACACT GCCAACCTCA GACTGGAAGG TGGCTAAAGT GGAGGCATCA      1500
     AAGGGCCCCA CAAACCAGGC GGTAGTGATC CTGAACAAGG AATCGCTAGC CCCGATCGAG      1560
     GCAGCCAGGG GAGAGCTCAA CTTCGGGTTC AGCTCGGTGA CCATGAAGGT CTACAAGTCG      1620
     GATGCAGCGG CCGAGGCGCG TTCTGCCAAC AAACCAGTTG AGCAGGACGT TGCCTCGGAG      1680
     ATCGAGGCAC CGGAAGTAGA CCCGGAGCCG GAGCCGGCCC TAGAGAGCTA CTCCTCGGAG      1740
     ACGGAGCTGC TGCTCGATTT TGAGGCGATG TGTCGGGACG ACATCCTCGA CGACTCAGAC      1800
     GCCGATATAA CAGTGGTGGA GAATGTTTCT AATGAAGTCT CTGAGGCTTC TGCAGATAAA      1860
     TCTCCACCAC TGTAAAGCAG CATCCGCTGC TCTTATACTC CGCTTAGTCG CGAGCGGAGG      1920
     AGACATAGTC CTAATCCAAG AGCCCTGGGT GGTAGGAGGC AGGGTCTGTG GATTAGCGAC      1980
     AAAGGACTAC AACCTAATTG TAGCCCAAAC GGAAGGTAAA ATAAGAACCT GCATATTAGC      2040
     AAGAAAGCAC TTAAATATCT TTCTGCTCCA CAACTTTAGC AACGGCGACA ACACGGCGGC      2100
     CAGCCTAGAG CTACAAGGGA CACGCCTGAA CCTGGTGTCG TCTTACATGG CTCATGAGGA      2160
     AAGCGATCCT CCCAGTGACC TCGTTCGCAA GATTGTCAGC GATAGCGAGA GGTCGGACAC      2220
     AAGCCTACTA ATAGGCTGCG ATGCCAACGC TCACCACACC CAATGGGGGA GCTCGGATAC      2280
     AAATGTAAGG GGTGAGTCAC TTTTTAGCTT CATCCTTAAC TCCAACCTAT TTATTGGAAA      2340
     TCGGGGTAAT GACCCCACTT TCATTATAAA AAACCGCCAA GAGGTTATTG ACCTCACTCT      2400
     GTTATCTCAC AAACTGTTAG ACACTATAAA AAGTTGGAGA GTCCTAGAGG ACCACTCCTT      2460
     CTCCGACCAC AGGTACATCG AGACAACCCT ATCGCTCGAA AGCACCATAC CCACTAGCTA      2520
     TGTAAACCCA AGAAAAACCA ACTGGGATAC GTATAGCGCA AAAATGGAGG AATTACTCCC      2580
     CCCCCTAGCC CCAAAATGCC CGGATACACA AGACGATTTT AATCGTCTTG TGGACAATTT      2640
     CACGGAAGCT TGCAATAAGG CCTTCATGGC AGCTTGCCCC TCGACCAAAC CAAGAGGGAA      2700
     AAAGAAACCC CCCTGGTGGT CTAAACATAT AGATACCCTC CGAAAAGACT GCAGGACTCT      2760
     CTTTAACAGA GCCAAAAGCA GCAGCGAGGT AGCGCACTGG GAAAATTACA AAAGTAAGCT      2820
     AACCCTATAC AAAAAAGAAA CAAGGAGAGC AAAAAGGGCC TCTTGGCATA AATTTTGCTC      2880
     CGAAATTGAG GACACGTCAG AAGCCGCAAG GCTACGCAAG GTCCTGTCAA AAACATCCCC      2940
     CTCGGTGGGA TATCTCAAGA GAACTGATGG TACGTGGACA AACTCTAGCG AGGACTCCCT      3000
     ACACATTCTT CTCGAAACTC ACTTTCCTGG GTGTACGACC ATCGAGCCGG CAGACACCCC      3060
     AAGTGAAGGC CCGGAAACCT CGATGGGGCA CATCCTCACA AAACGGAATA TAAGCTGGGC      3120
     AGTAAACAGC TTTAAATCCT ACAAATCGCC TGGCCCGGAC CAAGTCATTC CGGCTCAGCT      3180
     ACAAAAAGCC GGGGACGTGG CCATCAACTG GCTGCAAAGT ATCTTCAGGA AGATACTGAC      3240
     AGTGGGAAAA ATCCCCCGCG CTTGGCTAAA GGCTAAAATA GTCTTTATAC CCAAGGCAGG      3300
     AAAACCCTCT CACACAACCC CAAAAGACTT CAGACCAATA AGTCTATCGT CCTTCCTTCT      3360
     TAAAACCTTT GAAAGACTAG TCGGGCTGCA GCTGAGGAAA ACCATTAAAC CTCAGGCTGT      3420
     CAGGCGCTCA ACATGCCTAC CGAAAAGGGA AATCCACGGA AACGGCACTC CATGAAGTAA      3480
     TCTCGGCGGT AGAGAAATCT CTTCACGTCA AAGAATACTC CCTAATCGCT TTCCTAGACA      3540
     TTGAGGGAGC TTTTAACAAC GTCATACCGG GAGCCATCAC AGAGGCACTG ACTGACCTGG      3600
     GGGTGGATCG TCACTTGGTG ATGCTCATAG ATCAATTGCT CACATGCAGG ACAGTGACAT      3660
     CATCAATGGG ATCGTCCACT CAGTCAAGGT ATGTCAACAG AGGCACCCCG CAAGGCGGTG      3720
     TCCTGTCTCC CCTTCTATGG AACATAGCCG TCAATAAGAT CTTGTGTGAC TTGGAAGGGG      3780
     AGGGCTGCAA GGTGGTAGCT TACGCGGACG ACGTTGCCAT TATCTTCTCG GGAAAATTCC      3840
     CTCAAACACT CTGCGAACTA ATGACCGCAA AGCTCGCACG ATTGTCAGAA TGGACAAAGT      3900
     CGCGTGGACT GGGTATTAAT CCCTCTAAAA CGGAACTTGT GTTGTTTACA AACAAATACA      3960
     AAATCCCGCC CCTCAACCCC CCAATACTAA ACGGATGCAG GCTCTCCTTC AGCGACAGTG      4020
     CCAGTTACTT AGGGTTGGTA ATTGATAAAA AGCTCAGCTG GAACCTAAGC ATCAAAGACA      4080
     GAGTGAAGAA GGCTACGATA GCCCTCTACA CTTGCAAGAA GGCCATTGGG CTAAAATGGG      4140
     GCATGAACCC AAGAATAGTC CAATGGATCT ACCTAGCAAT AGTTAGACCA ATACTGCTCT      4200
     ACGGAGTCAC AGTGTGGTGG ACTGCCCTAT CGAAGGGGAC CATCACAAAA CAACTAAGCA      4260
     AGGTGCAGCG AACTGCAGCC TTAAGCATCA GTGGAGCTCT GAGCACAACG CCAACGGATG      4320
     CGCTAAATGC TATACTTTGC CTGCAGAGCC CTGAACTTGC AGGTAAGGAG CAGGCAGAAA      4380
     TGGCAGCAAT CCGTCTCAGA GACTCCGACC AATGGGTGTC ACAACGCACC GGCCATGCAT      4440
     CCATCCTAAA TGGAAACAAC ATCGTCCCTG CAAAAACGGA CTACTGCGTT CCGAGGGAGT      4500
     ATACAGATAC CCCCTTTGAG ACAATCATCC CTCACAGAAA CGACTGGCTT GAGGGACCGC      4560
     CTGGTCCAAA GGAAGCCATT CAAATTTTTA CTGATGGCTC AAAGCTTGAC AACAAGGTCG      4620
     GAGGAGGAAT ATACTCCGAA CTGCTGAATA TAAGCTACTC CTTCAGGCTC CCGGATCACT      4680
     GCAGTGTCTT CCAAGCGGAG GTCATAGCGA TCAAGGAAGC TCTGAGCTGT CTTCAGGAAC      4740
     TAACCCCTGA AGCGACTTAC ATAAACATCT ACAGTGATAG CCAAGCTGCA ATCAAATCAT      4800
     TGAATGCGAT AACGACAAGC TCGGCCACAG TTGCGAACTG TCGCAAATCT CTTCACGAGA      4860
     TGGCTTATCA GTTCGTCATC AGCCTAATAT GGGTCCCGGG CCACCAGGAC ATTGAAGGCA      4920
     ACTGTATAGC AGATGAGCTG GCCAGAGCTG GAACAACAAT CCCCCTTCTC AATGATAAGG      4980
     AGGATATTCG TATGCCAATG GCCACCTGCA AGCTCAGAAT AAAAGAACAT TTTAAGAAAC      5040
     TTACAAATGA CAGATGGCAA ACTGTGCCAC TATGTCGCAT AACTCGGCAA ACATGGCCTA      5100
     ACATAAATAG GAAGCGCACC GATGAGCTCT GCAAACTCAG TAGGAGTAGG TGCAGCTCAG      5160
     TCATACGCTC CCTTACGGGA CACTGGCTAA TAGGCACACA TGCAAACAGG CTGGGAGCCC      5220
     CTTATAACGA TTTCTGTCGA AGCTGTAGAG ATGAGGACGA GGAGGAGACT GTGGAACACC      5280
     TTTTCTGCTC CTGCCCGGCT CTCAGTAGAA GGAGACTCCA ATACTTGGGC TCTCCTTTTC      5340
     TAAATGACAT TTCGGACATG TCTACAATAA GTCCCAGACG GATCGCTGGC TTCATAAGGG      5400
     CATCCGGATG GGATAATGGA TAAAATAGGG TCTCACGGGA GAGAAGGGAG CGAAACATGC      5460
     GGTATCACAA TGGGCCGAAA CCGGCCTAAG TGTGTCGGGT CTCTGACAAT CCCCGACAGC      5520
     CGCCTCAACC TAACCTAACC                                                  5540
//
ID   DSV28T24   standard; DNA; INV; 7779 BP.
XX
AC   X60177; S39346;
XX
DR   FLYBASE; FBgn0005661; Dsil\Loa.
XX
FT   source          X60177:1..7779
FT   SO_feature      CDS ; SO:0000316:689..1816
FT   SO_feature      CDS ; SO:0000316:1786..7716
XX
CC   This is a consensus sequence according to Felger & Hunt (1992).
CC   CDS annotation from Felger & Hunt (1992).
CC   Derived from X60177 (Rel. 37, Last updated, Version 8).
CC   Michael Ashburner, 17-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7779 BP; 2297 A; 1808 C; 1900 G; 1774 T; 0 other;
     ttaaccaccg ttagcaaaaa acattaatga ttttgatttc tttattggct tcatgtcgat        60
     ctaaactagt tgatcgattt ccaaatcaat accacaatta ttgttaaaag agaatgagat       120
     tgttcttggt agattatttc gccactttcc tcttttccga aaacaattct tcaaattaaa       180
     gtagaatcag taattggtta agggaaatca cgattgatat atttataatt tcaagatgaa       240
     accattttat taacggttaa gtctcaacgt gattcataaa ttcataaatg gcagtgcagc       300
     gaagtaacga agatatagca gctagcataa atgctgatat ggtattgtgt aacatttgta       360
     gagccccagt tctgattaat actgaaattg cggagacccc ttgcaaacat aaattccatc       420
     ggtaacctga ttacgtacta atgaaacatg tccgtcgtgt agaacgccat gtacactttc       480
     ccagttaatt gatgtcaaaa gccagtcatc gaaagggcct tttcaagttc ctcgaacagt       540
     tcgtggtggt catcgagttg gtgctacaca taggaatata cctaatatca aatccaataa       600
     ctctggagca caggcttaca ggcctaatac taatttcaat gtcgggaata gacgggattc       660
     attcaatgct tcgcttgacc catccatccc ttctgaacag cgaattcagc aacttatttc       720
     aaactcgtta gatacatttc gagccagtat ggttgtagca gtgtctgacg agatcatttt       780
     agctataaga aaccttaata tctcaaataa ccagcaggaa gctcgaattg aatcaggagt       840
     cgagcaaaat attcgaacag ctgtagataa tcgaagcact gattccattg aacgacccga       900
     caaagtctca agtattattt cgagttggca tgtacaattc tgtggatctt ttaatgaaat       960
     ttccgtggaa gattttattt accgcatcaa tcgcttgacc gacgaatgct tgaacggaaa      1020
     ttggaatttg ctttatcaat ttgcaattat tttgttctgt ggacctgcat tacagttcta      1080
     ctggcggttt caaagaacaa atagtcggtc taattggttt caactatccg atgccttgcg      1140
     tgagcgatat agagaacaac gcccggatga gaaaataaaa gattctttaa gatctcgtaa      1200
     acagcgaagt ggagaacgtt ttgttcaatt tttggatgct atccagtgta ttgctgatac      1260
     actgcgagaa ccaatgacag atcgggaatt agtggctaat attaaaagaa atgttaaggt      1320
     tgaaatgagg ttagaactac ttcatgtagc ttcacccaat atagcaaccc ttcgaactga      1380
     atgtcacaag cacgaacaat tctgtttaag tatgtcttca aaacctgtgc ctcggccaac      1440
     taacaccagt cattttctta atgaagtcat acatgaggaa gaatcgatag atacttccca      1500
     tatatattct acagagtcaa ccgagataaa tgcaatacgc tcagttgata ggataaaatg      1560
     ttggaattgt aatgaggtag gtcatagata tcaagattgt ataaaaacca gacgcagacc      1620
     aggcgtattt tgctatggtt gtggccgttt tgataccacg catcggaaaa cttgcaacag      1680
     gatgtccacc gagcataatc agttgatatc cacctacagt ctcggatcaa caatttgtac      1740
     cccgccaatt cctaacaata acacgagcct atcgaagaat ctaagatgca aacagttgca      1800
     tggcaacttg aattaatatt attcaaaaaa aaaattattg ccagcgtaga gcggaaatat      1860
     tctatttgta aatcaattcg cttcccaaaa gttagaatag atgaattttg gagaaacaag      1920
     cgatcgccaa agaacattac atttatctct accatccgca accgtaatga ttccgcgtcc      1980
     atatttacaa atcttatgtt gtttggtcaa agctatttag cattattgga tagcggtgct      2040
     aataaaagcg tgatcggagg acaattggcc atacgattgc ttgccgcaga cctaaagtta      2100
     aaaaaattga aaggcaattt tcgcactgca gatggccaac acgaaaacgt attaagtgct      2160
     cttcttattc cgttggagta tgacttatta cagaaagaat ttgaatttat gattctacct      2220
     tcaatcacac aagacatcat ctgtggaatg gatttttgga agtcatttgg tattaatatt      2280
     tctaccacga ctgtaataag cgaattagac tacagtgatc aaacgtgtaa taataggtgt      2340
     ctagtgttac agagaggacc tggtctaaag aacgtgtggg atggttcgga aagggctgag      2400
     ctgaggcacc aggcgggtcg cgggttgcgg atagggaacg gccttcctgc agggaggtta      2460
     gctgcgaata atacgaggtt cgtcgtaaat aagcagtccc ggacaaacag cgggcgcata      2520
     atgtcgatcg taccgacaag gcgcttgtat tgccgccttc caaagtgtag cttaccacaa      2580
     ccgcccctat ctccccacat atttacctac cctatcctat cccctcatct cactccgggc      2640
     tggactaagg cgtcattcga accgtgccga gagtcagctt ggctggcggc acggattaaa      2700
     actagccaag tcgttaatcc atccatcctc cacaccgtgc tgctccagca actattagga      2760
     gatgccgcag gcacaagaaa ctttggctgt gaggcatggg ggcgatggct ggtacaccca      2820
     gaccaccgcg cccagcaccg aacgccgcga ggcaacccgc tcagcgccca aagaggaagg      2880
     gagagttcct gccacctagg ggtcaactcg gtggactgga tgacccgaac cggaggaatc      2940
     tctgcggttc aagggtcaaa tggtacctcc aatcaggaac tcacccctga tgaagccctg      3000
     aaaaaggcca aagagcccag ggaggagatt gcagcacatg cgccacgccc gaagaggcgt      3060
     acgagcaatc tcacaccacc ggtggccacc cccaagagga tttgcccaga ggttgtgggc      3120
     gctacccgcg gctcggcaac ggcaaaggtg ctgaacaaaa atggggcagg gaatctagac      3180
     ctgcgcccaa gcacgtcgcg tgcagcggcc acgaagccca gctcgccgac acccaccgag      3240
     cctcgcctgt catatgcaga catggcaaaa aacgttaggg tagccgtgtt gcccgtggat      3300
     ttcccacggg tcatgctcag tcacggagat ttgtctgtgt tggaagaggc catcatagac      3360
     gaagttattg cgtctggtgg agatatcgcg gcctcattca cgggcattca cttccgggtt      3420
     ggattcctgc taattgaatg ctccggtgag gcctcagccg cctggctgag gaccgcaaca      3480
     tcgaggctga aatcgtggaa gggcgtgccc cttaagtgca aggtgggaga tgacataccg      3540
     tcgccccact gcatcacgct gttttgcccc aggagtgtgg gtcggtccac cgaatccctg      3600
     ttggttctgc tgaggaacca gaacaggatc gagaccgaca cctggaaggt gatctccagg      3660
     aggaacgagg gtggaggagc cctcctggtg atcgcgatcg acgagctatc caaatgtata      3720
     ttgtggagaa ggggcaccat gtcttctccg ctacggacca tccccgtaag tggactaaag      3780
     aagaagactg gagcaaagcc ccaacctgct ccaacgggca aggaggatgt ctcagtgggt      3840
     aacatcacca catcagacac tcctgcctcg gagcagagca gtccaaccgc gcagcccgcc      3900
     gacccgtcgg aggacctcgc agaagacgag gaactggcag acgtgacgct ctgccaggag      3960
     gggattctgg gggaggaaga catccccatg tcctcgcaag agctggcgga ggagctgcag      4020
     gatgcagctg tagctgacgt cgttatgacg aacagcggtg acgggtgcag ctccaggccc      4080
     cattcaccgt gtcagctgga gccttcccag aagtacatga cgaagggcat caacacaggg      4140
     ctggcccagg taaacatcca ccgggctaag gcagcctcgg cggtcttagc aaggatgttc      4200
     accaacaaac accttgggct ggccctggta caggagccgt gggtgaacaa tggcattaag      4260
     ggcctgttca cagccgactc aaaggtaatc tgggatcgga gagatccagc acccagagcc      4320
     tgtatcatgg taaggaaaag tattaacttt aatatccttt cagaattctt gactagagac      4380
     tgcgttccca tattggtgta taccaaaggc agcgcggtct ctatggtcat cgtgtctgca      4440
     tatttcgcag gggatgcgcc ctgcccacca ccagaggtcg aaaggctggt ggagtattgc      4500
     aggaaagaga agatgccggt gctcatcgga tgcgatgcca gtgcgcacca tacgatatgg      4560
     ggcagcagtg acatacattt aaggggtgag tgcctaactg attttatttt taaatataat      4620
     ctagaactag aaaatgtcgg atctgctccg tcatttgtta ctaggatcag ggaagaggtg      4680
     ctggacatca ccctaatcag tcggtcccta aagcctcacc ttagggaatg gcatgtttcc      4740
     caagaggaat ccatgtctga ccataggact atcctattta atttaaaatt aaatacggat      4800
     agtagcacac caggtcgcaa ccccaggaga accaactggg aaggctataa gtcgacctta      4860
     gggctcaacc tagccaacgg actatctggt acacccagga atccgataga gctggacaga      4920
     gccacggatg acctcaataa gtgcataatt agtgcatttg aggagaattg cccggtaggg      4980
     aaaagattca tggaaaaaga tgccccatgg tggaacgaca gtctggaaag gctgcgcgtc      5040
     accacacgtc gcctcttcaa taaagccaag agagacggaa tatgggaaca ataccgcgaa      5100
     tgccttacct cctataataa ggagataaga aaggctaagc ggaagaatta cagagacttc      5160
     tgtgaaagca tagttagcac aagcgaaggc gccaggctcc acagagcact ggcgaaacga      5220
     acgcctgatg ctaaccttgc actgaagcgt ggggataatt ccttcacgat tagcaataag      5280
     caaagattag aattactctt cgagacgcac ttcccaggct gcacacccct gcaggaagag      5340
     gctatcgtag gaataagcag atatagaccg tccactgacg actgggcatg cgccaagtcg      5400
     acagtcacaa aggagaaact aaattgggca attggcacat tccagcccta taaatctccc      5460
     ggaatggacg gcatatcgcc agccttcctt caaacgggcc aggatatact cctctcccgt      5520
     attaggaaag ctctagtaag tagcctagcc ctcggacaca taccgagcgc atgcaggaga      5580
     gcaagggtag tcttcatccc gaaagcaggg aagaaagata ttaccgaccc gaagtccttc      5640
     agacccatca gcttgacatc gtttttattg aaaacgttgg aaaagatggt ggactacaag      5700
     attagaagca ctttgctcaa gcaaaggccg ctgcacccag cgcagcatgc atatagagta      5760
     ggcaggtcta cggacacagc actttatcag ctgcaacgca ccttgagtgc ggcaattgat      5820
     tataaggaag tagctttgtg cgccttccta gacatagagg gtgcctttga caatacatca      5880
     cacgatgcga tcaaggacac cctctcgaga aggggcctgg atcctaccac cagcagatgg      5940
     attctcgcac tgctgcgatc caggcaggtc acagcatcag tgcatgatag caccgtaacg      6000
     gtcctaacca ccaagggctg tccccaaggg ggggttctgt ctccgctact ctggagtctg      6060
     ttggtagacg aactactaaa cagactcact aacagtggta tacaatgtca aggttatgcc      6120
     gatgacattg ttatcatggc gcgaggaaaa tttgaagaat cactctgtga catggtccag      6180
     tctgggctaa ggataacgta tgactggtgt aaggaggtcg gactcaacct taaccctacg      6240
     aaaacagtca tcgtcccctt taccagacga cataaactac agaggatgag gcaaatatgg      6300
     ctctcaggta ccccactaga aagaagtagg gaggttaaat acctgggcgt catatttgac      6360
     agtaaactta actttggcac ccatgtgcag aatgccatgt taaagtgctc cagagcgctt      6420
     tacacatgtc gcagcatagc cggcaaatca tggggcacat caccaaagat agtaagatgg      6480
     ctatacctaa tggtagtaag acccatgcta acctatgggg taatagcatg gggtgacaga      6540
     gcacggttga tcaccgtgaa aaagcaactg caaaaattgc aaagaatggc ctgtgtctgt      6600
     atgacaggag taatgtgcac ctgcccaaca atggcccttg aagccttaat ggagctcacg      6660
     ccactccacc acatcataag gctcaagcag aaagcgacgc ttttaaggat gtcagcagaa      6720
     ggagttggat gcccaactct ctcaaatgaa ctgcccctgc tattgcaacc cagggacgaa      6780
     atgaaagtcg aatacatctt cgaacgtaat ttcacagttt acatgagcag taaaaggaac      6840
     tggacaactc tggaagaggt ccaccctatg aagccgcaca ccataaggtg gtacacagcg      6900
     gatcactcac caaccagggc acaggtctcg gtgtggtggg ccctcgggtg tcataccacg      6960
     aatccctacg gaacgcacac aagcatattc caggctgagg tatgtgcgtt aggaaaatgt      7020
     gcgattttaa ccttaaaacg taactatcgg aatacagaca catccatact atccgatagt      7080
     caagcagcat taaatgcaat aacggggact aaaataacat caaagatagt ccaggaggct      7140
     cgttcaaagc taaacctact tgggactcac aacaggcttg cctgcgatgg gtcccgggcc      7200
     acagggatat accgggtaac gaggcggctg ataagcaggc gagaatgggg gcagaaaggc      7260
     cccctgatag gaccagaacc gtattgtggc ataggcagac acactatacg gctggtactt      7320
     agaaatgaag agaaacaggt gcggcagcag agctggtcgg aggcagtagg tctcaggcaa      7380
     gccagatgtc tcctcggtgg ttataatctc aagcgattta agcaagttat aaccatggga      7440
     aagaacaacc ttaggatcct caccggtcta atgacggggc actgtcgact aagaagtcac      7500
     ctaactagac taggtatata tagtagcgat ctctgcaggt tctgtgaaat agaggaggaa      7560
     tcctcggtac acatcctagc agaatgtgtc gcactagcta gaaggagatg cagcatcctg      7620
     gggatgcatg tcttgaattt tagagacata gaagacctca acccaacaaa gatcctcaca      7680
     ttcgttcggg aagtggggct gatggaagag ctataggctc agaagggggc acaatagatc      7740
     taaaaggtcg cggtgcaact tccccaataa taataataa                             7779
//
ID   DHUHUH3    standard; DNA; INV; 1658 BP.
XX
AC   X63028; S51651;
XX
DR   FLYBASE; FBgn0003948; Dhet\Uhu.
XX
FT   source          X63028:1..1658
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..50
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1609..1658
FT   SO_feature      TATA_box ; SO:0000174:293..296
FT   SO_feature      CDS ; SO:0000316:366..1121
FT                   /db_xref="FLYBASE:FBgn0044280; Dhet\Uhu"
FT                   /db_xref="SPTREMBL:Q02881"
FT                   /protein_id="CAA44763.1"
FT                   /translation="MGKRTTIEQRNLILEHFKIGYSYRQIAKMVNLSTTTVFNIIRRFV
FT                   DENRIEDKGRKAPNKIFTEQEKRRIIRKIRENPKLSAPKLTQQVQDEMGKKCSVQTVRR
FT                   VLHNHDFNAQVPRKKPFISTKNKGTRMTFAKTHLDKDLEFWNTVIFEDESKFNIFDSDG
FT                   RNYVWRQSNTELNPKHLKATVKHGGGSVMVWACISAAGVGNLVCIETTTDRNVDLRILK
FT                   ENLLQSAEKLGIRRTFRFYQDNDQDNNQA"
XX
CC   Derived from X63028 (Rel. 36, Last updated, Version 7).
CC   Michael Ashburner, 17-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 1658 BP; 547 A; 315 C; 343 G; 453 T; 0 other;
     tatatacagt gtctcacagc tcaactggaa cagtgcctag caaaaaattt aattgcctgc        60
     agtaaactaa ttatccaata ttttttaaaa attccaaaga ccgatggcag gtacatatat       120
     taactaccat aatgaatata tgatcccaat aaactggggt tttccaccgg ctaggccggg       180
     ttatgtaaca aagtacctta atttatggtt tcatattatt tggaacaatg gcgttatgga       240
     cacctgggtg ccataaaacc cggatttttt acgtcaggtt gattattttc ggtataaata       300
     gaccaatcct tcgtagtcag tttagttata tcctgcatct cgggtgcaac cagccaacaa       360
     ggcatatggg caagcggact accattgaac aacggaatct gatcctggaa catttcaaga       420
     ttggatattc atatcgccaa atagctaaaa tggtaaatct aagtaccaca actgtattca       480
     acatcattcg gcgcttcgtc gacgaaaatc ggatagagga caagggcaga aaggcaccaa       540
     acaagatttt caccgaacag gagaagcgga ggatcatcag gaaaataagg gaaaatccca       600
     agctatcggc tccaaaactg actcaacagg tgcaggatga aatggggaaa aagtgcagtg       660
     tgcaaactgt gcgccgggtt ctgcacaacc atgactttaa tgcccaagta ccacggaaga       720
     agccatttat aagcacaaaa aataaaggga ctaggatgac gttcgccaaa acccacttgg       780
     acaaggattt ggagttctgg aacacagtca tatttgaaga tgagtccaaa ttcaacattt       840
     ttgactcgga cggacggaat tatgtgtggc gacagtccaa tactgagctg aatccgaaac       900
     acctaaaggc aacagtgaag cacggcggag gaagtgtcat ggtatgggca tgtatctcgg       960
     cagccggcgt cggaaatttg gtgtgtattg aaacaacaac ggacaggaat gtggacctca      1020
     gaatattaaa ggaaaattta ctccaaagtg ccgagaagct aggaatccga cgtactttcc      1080
     ggttctacca ggacaacgac caggacaaca accaagcata agtccggatt agtacagtcc      1140
     tggcttatct ggaactgccc ccacatgata attccaccgg cccagtctcc agatgtaaat      1200
     gttatttaaa atttgtggga tctgctggaa aataacatcc ggaatcacag atccaatctc      1260
     aaaaatgttt tgctggatga gtggagcaaa atcagtccag aaactacccg gaagctggta      1320
     tcttccatga ataataggtt aagggcagtt attaaggcta aaggatatca tactaagtgt      1380
     taacatcctt atttaagttt ttatacgcca aatatgttac ttttttaaga ctgttcgaat      1440
     taagctttga catgtatttt ggatatgttt tcagtttttg actaatttta attaattaat      1500
     taatatttta gtaaaaacta aagattattt ttcaaacatg atatagcatg aaacaatttg      1560
     gcatttaaac attttgcatt tgtttctttg tttaaacttt atagcacttt aaaatatttg      1620
     ctaggcgctg ttccagttga gctgtaagac actgtata                              1658
//
ID   DSRN       standard; DNA; INV; 6644 BP.
XX
AC   D83207;
XX
DR   FLYBASE; FBgn0015168; Dsim\ninja.
XX
FT   source          D83207:1..6644
FT   SO_feature      five_prime_LTR ; SO:0000425:1..316
FT   SO_feature      three_prime_LTR ; SO:0000426:6329..6644
FT   SO_feature      transcription_start_site ; SO:0000315:183..188
FT   SO_feature      primer_binding_site ; SO:0005850:323..338
FT   SO_feature      CDS ; SO:0000316:<411..4493
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044186; Dsim\ninja\pol"
FT                   /db_xref="SPTREMBL:O02006"
FT                   /protein_id="BAA19771.1"
FT                   /translation="RFRRPARICVSAASATYRQRSRSQRQWRAVSDIEGRSLRRTPVRT
FT                   SRSQRQGDARSVICGDRSQRSEGVRDAILEAQRRHHLELGKMQHSPRKSARLNGGEATP
FT                   ITTASQQPASSGAGTRTRVNITAASIPCPATTVTTVASQPRSTAVTAASSVPEVNQPLV
FT                   LELMERIAALERELEKARSLESVSTANCAPIAVGPSAVGANSGASGRPPFWSGQPIPTS
FT                   NGEALHNGVGSVPYNGDGASGAACTLPPSSSGPPLLTTSNYFVEPLCATGTAQPAHGLV
FT                   LPGVSIHNAATASPLVGSYAATTPSGIQGAYGPRKLPDLPIFGGQPEEWPIFSCAFVET
FT                   TRAYNCTDLENNQRLLKALKDEAREAVKALLIHPGNVSAVMEQLRFRFGRPEQLIRSQL
FT                   NNVREVQPISEHNLAKIIPFATRVSNLAAFLQSAKAEQHLGNPTLMEELVAKLPTSKRV
FT                   DWARHAATIAPFPTVVHFSAWLQEYANVVCTVLDVEGKEPRRRLLHASVDHNECDQQDD
FT                   RHGGCSICGGQHGILNCRKFIAASPQERWSNVKRHRLCFNCLRSGHTARSCYTQGECQI
FT                   NGCRREHHRLLHGADEERRPLQRGGFRRHEGNQQPTVSRRSPARRPSLRDGHKDQERNR
FT                   QPAVPSNSLERGAPREAGAPMQRNLSCVDAEGGRLLFRILPVTLYGAGRKVDTYALLDE
FT                   GSSVTMIDDELRRDLGVQGERRQLNIKWFGGKATREPTNVVSLKISGVGKPTRHVLRNV
FT                   YAVSSLSLPMQTLSRRDVQGVHRDARLPMKPYSNVVPKLLIGLDHGHLGLPLRTRRFAR
FT                   EGPYAAVTELGWVVFGPVSGQPTTPSPRSSLLAVSVDDAMEKMVEDYFDMENFGVKTAP
FT                   PVAASDDVRAQRILEDTTVKVGRRYQTGLLWKDDHVVLPPSYEMAYRRLVNVEKKMKRN
FT                   KPLAQEYDRIIKDYVSKGYARRLQPEEVAVRSDRLWYLPHFSVENPNKPGKVRLVFDAA
FT                   AKVGGTSLNSELDKGPQHYKPLPAVLFHFREGAVGVCGDIKEMFHQVLIRPEDRCSQRF
FT                   LWRDGDDERDPDVYEMNVMTFGAACSPSAAHYVKTMNALKYRDSDPRAVKAITDYHYVD
FT                   DYVDSFATESEAISVSTRVKEIHKDAGFELCQFSSSSPTVETALGPGRVKSVGWGEAEE
FT                   KILGMRWQVATDDFRFNVEYHRVPSSVLSGDRVPTKREYLSLVMSTFDPLGFLCCLMVT
FT                   AKLLLREIWRQKIQWDEPLPEELSKAFAIWRKEMDAVGQFRCPRHYFGRGAVRAVELHV
FT                   FVDASQAAFAAVAYWRVTYEDDDVQVSFVSAKTKCAPMRTMTIPRLELQAAVLGTRLMN
FT                   TVKQEHSVVITDLLLWT"
FT   SO_feature      CDS ; SO:0000316:<4471..6237
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044186; Dsim\ninja\pol"
FT                   /db_xref="SPTREMBL:O02007"
FT                   /protein_id="BAA19772.1"
FT                   /translation="RTCCYGLDSKTVLRWIGSTHRRYKQFVGNRVAEILESSKVSQWRW
FT                   VPTADNAADDATRSQKGVDLSQESRWLRGPAFLRQPAASWPGPEEGTERVPDAPDEEEM
FT                   PSEFALVAADDFVIPFQRFSSFSRLVRTTAWVLRFARWCRKQRNELEEYGLTAAECKAA
FT                   ENLLVRQAQLESFPDEMRSAETGQDVGGSSDIRGLVPYLDEDGILRAYGRIDAALCMPY
FT                   SARRPVLLSHRHSLTELIVRDFHDRMKHQNVDATIAEIRTKFWVTKMRRVMRKSHLIVQ
FT                   RVQVAATATDAADNGTPSGRQTGCGWMAIQIHRTGLLWATAGDCVPSQGEALGRLVYVF
FT                   DDKGDSPGVAHDLSTDSCIIAIRNFVCRRGPVYRLRNDNGKNFVGADREARRFGDVFEM
FT                   EKLQSELSSRSIEWVFNCPANPSEGGVWERMVQCVKRVLRHTLKEVAPRDHVLESFLIE
FT                   AENIVNSRPLTHLPVDADQEAPLTPNDLLKGVANLPDTPGLDAECPRRVLRESSGGLLA
FT                   CSETVSGGGGSWSTCLRLCAARSGAAERSPSTRVIWSSSAILPWPDESGARASWRRSTA
FT                   ELMESSDALRCA"
FT   SO_feature      primer_binding_site ; SO:0005850:6318..6327
FT   SO_feature      polyA_signal_sequence ; SO:0000551:6544..6549
XX
CC   Derived from D83207 (Rel. 53, Last updated, Version 4).
CC   Michael Ashburner, 18-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 6644 BP; 1603 A; 1589 C; 2098 G; 1354 T; 0 other;
     tgtcgcggat cgaatattgt tatcgatagg ctagtatttt gagaagtccg aatgtggacg        60
     gatttgtaag cccatatgtg tctgggcaca ttgttttcgc cattgtaaat tgccgggaaa       120
     atttagcttt tcattgtcgt gcaagagttg gaggacacac tgcggtgagc taataagtta       180
     agttagttac aattgtaaaa cattaattct tccagaataa aacgctttct actaccacga       240
     attagtctgc cctttctttc gggaaccaat gcgtggagta gccgtttaag gcaactcctt       300
     gtgacgcacg acgacaactt tttattcgca gtcctaggcg actgcagggg caacttgcgc       360
     tggaatgacg gtttagacgg ccagctagag agttgccgga gctggagtga cggtttagac       420
     ggccagccag gatttgtgtg agcgcagcca gcgctacgta ccggcagagg agtcgcagcc       480
     agcgacagtg gcgcgcagtc agcgacatag agggacgcag cctgcgtcga acgccggtac       540
     gaacgagtcg cagccagcga caaggagacg caagaagcgt catttgtgga gaccgcagcc       600
     agcggtcaga aggcgtcaga gacgcaattt tggaagcgca gaggcgccac catttggagc       660
     tggggaagat gcagcattcc ccaaggaaga gtgcccggct gaacggaggg gaagccaccc       720
     ctataacaac agcgagtcag cagccagcca gtagtggagc aggaactcgg acgcgggtga       780
     acatcacggc ggcgtcgatt ccttgcccgg ccactacggt gactacagta gcttcccaac       840
     ccagaagtac tgctgtcaca gctgcgagtt cagtaccgga ggtgaaccag cccctcgtgt       900
     tggaactcat ggagaggatc gcagcgttgg agagggagct ggagaaggct agatccctgg       960
     aaagtgtgag caccgccaat tgcgcgccaa tcgcagttgg cccaagcgca gttggcgcca      1020
     acagtggagc gtcggggcgg ccgccatttt ggagcggcca gccaataccc acatctaacg      1080
     gagaggcctt acataacggg gtcgggtcgg tgccatacaa cggtgacggt gcgagcggtg      1140
     cggcctgcac gctgccgcca tcttcgagtg ggccgccatt gctaacgact agcaactatt      1200
     ttgtggagcc actgtgtgca acaggcactg cgcagccagc gcatggactc gtgctaccgg      1260
     gcgtgagcat ccacaatgcg gcaacagcat cgccacttgt cggatcctac gccgcgacga      1320
     cgccgagtgg aatccaggga gcatatgggc caaggaagct tccggacttg cctatatttg      1380
     gagggcagcc cgaggagtgg ccgatcttca gctgtgcgtt cgtggagacg acccgagcgt      1440
     acaactgcac ggacctggag aacaaccaga ggttgttgaa ggcgctgaag gatgaagcgc      1500
     gcgaggcagt gaaggcgcta ttgattcatc cagggaatgt cagcgccgtg atggagcagc      1560
     tgcgctttag gttcggccga ccggagcagc ttatccgcag ccagctcaac aacgtgcgag      1620
     aggtgcagcc aatttcggag cacaatttgg cgaagatcat tcccttcgca actcgagtga      1680
     gtaacctcgc ggccttcttg cagtcagcga aagcggagca acacctgggg aacccaaccc      1740
     tcatggagga gcttgtggcc aagctgccaa cgagcaagcg agtggactgg gccaggcatg      1800
     ctgcaacgat tgcgcccttt cccactgtag tccacttcag cgcgtggcta caggagtacg      1860
     caaacgtggt gtgcacggtt ttggacgtcg agggaaagga gccgaggcgc cgacttctac      1920
     atgcgagcgt cgaccataat gaatgcgatc aacaggatga tcggcatgga ggttgttcca      1980
     tctgtggagg acagcatgga atattgaatt gcagaaaatt tattgcagct tcgccacagg      2040
     aaaggtggag caatgtgaag aggcatcggc tctgcttcaa ttgcctgcga agcgggcaca      2100
     cggctagatc ctgctatacg caaggtgagt gccagattaa tggatgccga agggagcatc      2160
     accgtctgct acatggtgcg gacgaggagc gaaggccgct gcagcgaggt ggcttcagac      2220
     gccacgaagg gaaccagcag ccaacagttt ccagacgcag cccggccagg aggccttcgc      2280
     tacgagatgg tcacaaggac caggagagga accggcaacc agccgttccc agcaacagcc      2340
     tggagagagg agccccgcgt gaagcgggag cgcccatgca gaggaatttg agctgcgttg      2400
     acgccgaagg aggccgtcta ctgttccgta tactgccggt tacgctgtac ggagcggggc      2460
     gaaaggtgga cacgtatgcg ctcctagatg agggatcctc cgtcacgatg atcgatgacg      2520
     aactacgaag ggatcttgga gtgcaaggag agcgtcggca gctaaatatc aaatggtttg      2580
     gaggtaaggc aaccagagag cctaccaacg tggtgagtct gaagataagt ggagttggaa      2640
     agcccactcg ccatgtatta agaaacgttt atgccgtttc gagtttgagt ttgccgatgc      2700
     agacattgag ccgacgagat gtccagggcg tgcacaggga tgcgcgtctg ccgatgaagc      2760
     cttacagcaa cgtggtgccg aagctgctca tcggcctgga tcacggacat ctgggattgc      2820
     cacttaggac gaggcggttc gctcgagagg gaccgtatgc ggccgtaacc gagctgggct      2880
     gggttgtgtt tgggcctgta agtgggcaac cgaccacgcc gtcaccgagg tccagcctac      2940
     ttgccgtgtc agtggatgac gcgatggaga agatggtgga ggactacttc gacatggaga      3000
     actttggagt gaagaccgcg ccgccggtcg cagccagcga cgatgttcgg gcccaaagga      3060
     tactcgaaga caccacggtg aaagtggggc gccgctacca gacgggatta ctctggaagg      3120
     acgaccacgt tgtgctgcca ccgagctatg agatggcgta caggaggctg gtcaacgtcg      3180
     agaagaagat gaagcgcaac aagccgttgg cgcaggaata cgatcggatc ataaaggatt      3240
     acgtgtctaa aggatacgcg aggaggttgc agccggagga ggtcgcggta aggagcgatc      3300
     gtctatggta tttgccacat tttagtgtcg aaaacccaaa caagcccggc aaggtacggc      3360
     ttgtgtttga tgctgcagcc aaagttggag gaacctcgct aaactcggag ctggacaaag      3420
     ggcctcagca ctataagcct ttgccagctg tgctctttca tttcagagag ggagccgtcg      3480
     gagtctgcgg tgacatcaag gagatgttcc accaagtgct gatccgaccc gaggatagat      3540
     gttcccaacg attcctctgg agagatggcg acgacgagag agatccggat gtctatgaga      3600
     tgaacgtaat gacgtttgga gcagcctgct cgccgagcgc tgcgcattac gtgaagacta      3660
     tgaatgccct gaagtatcgg gattcggatc cgagagcggt caaggccatc accgactacc      3720
     attatgtcga tgactatgtg gacagtttcg ctacagagag cgaggctatc agcgtatcta      3780
     cccgagtgaa ggagatacac aaggatgctg gattcgaatt atgccagttt tcatccagct      3840
     cacccaccgt ggagacggct ttaggacctg gtcgagtcaa gagcgtcgga tggggtgagg      3900
     ctgaagagaa gatcctcgga atgcgttggc aagtagcaac agatgacttc agattcaacg      3960
     tggagtatca tcgagtgcca agcagcgtcc tgagtggaga tcgagtccct acgaagaggg      4020
     aatatttgag cctggtgatg tcaacgtttg atcccctggg attcctgtgc tgcctcatgg      4080
     ttacagcgaa gctcttgctg cgagagattt ggaggcagaa gatccagtgg gacgaaccac      4140
     taccggagga gttaagcaaa gcctttgcga tttggcgcaa agagatggac gccgtgggac      4200
     agttccgatg tccgcgccat tattttgggc gtggagcagt ccgggccgta gagttgcacg      4260
     tcttcgtgga tgccagtcag gcagcattcg cggcggtggc ctattggagg gtcacatatg      4320
     aggacgacga cgtgcaggtg agcttcgtga gtgcgaagac gaagtgtgcc ccaatgagaa      4380
     cgatgacgat cccacggctg gagctacagg cagcagttct tggaaccagg ctgatgaaca      4440
     ctgtcaagca ggagcacagt gtggtcataa cggacctgtt gttatggact tgactctaag      4500
     acggtgctga gatggatcgg cagcacccac cgccggtata agcagtttgt tggcaaccga      4560
     gtggcggaga ttttggagtc gtcgaaggtt tcccaatgga gatgggtgcc tacagccgac      4620
     aatgcggctg atgatgcgac gcggtcccag aaaggagtcg accttagcca ggaatcaagg      4680
     tggctaagag gacctgcatt tttgaggcag ccagcagcca gctggccggg gcctgaggaa      4740
     ggaactgagc gtgttccaga tgcccctgat gaagaagaga tgcccagtga gtttgcatta      4800
     gttgcggcag acgattttgt tattccgttt cagagattct cgagcttcag tcgcctggtg      4860
     aggaccacag cctgggtcct acggttcgcg cgctggtgcc gcaaacagcg aaacgagctc      4920
     gaggaatacg gccttactgc agcagaatgt aaggccgcgg agaacctgtt ggtcaggcag      4980
     gcacaattgg agtcgttccc cgacgagatg aggtcggcgg aaactggaca ggacgtcggt      5040
     ggatcgagcg acattcgagg attggtgccc tacctagacg aggacgggat tctgcgagct      5100
     tacggcagaa ttgatgccgc actgtgcatg ccgtacagtg cgaggagacc cgtattactg      5160
     tcacacaggc acagtctgac agagctgatt gtgagagact tccacgacag gatgaagcat      5220
     caaaatgtgg atgctacgat tgcggagatc cggacaaagt tctgggtcac aaagatgaga      5280
     cgtgtgatgc ggaagagtca tctcatcgtg caacgagtgc aagttgcagc gaccgcgacc      5340
     gatgccgccg ataatgggac cccatccgga agacagactg gatgcgggtg gatggccatt      5400
     caaatacaca ggactggact actttgggcc actgctggtg actgtgtccc gtcacaagga      5460
     gaagcgttgg gtcgccttgt ttacgtgttt gacgacaagg gcgattcacc tggagtggcg      5520
     catgacctgt cgacggattc ctgcataatt gcgatcagga acttcgtctg ccgtagaggg      5580
     ccagtatata gactgcgcaa cgataacggc aagaacttcg tgggagctga cagggaagcc      5640
     aggcgctttg gtgacgtatt cgagatggag aagcttcaga gtgagttgtc aagcagaagc      5700
     attgaatggg tttttaattg cccagcgaac ccgtctgagg gcggagtttg ggagcgcatg      5760
     gtgcagtgcg tcaagagagt actgcgtcat accctgaagg aagttgcacc gagggaccat      5820
     gtattggaga gtttcctgat tgaggcggag aatattgtaa actcgcgtcc gctcacccac      5880
     ttgcctgtgg atgcggacca ggaggcgccg ttgacgccaa acgatctact caagggagta      5940
     gccaatctgc cggatacgcc tggattggat gcggagtgcc caaggagggt tctacgagaa      6000
     agcagtggag gattgctcgc ctgctccgag accgtttctg gaggaggtgg gtcctggagt      6060
     acctgcctac gcttgtgcgc cgcgagaagt ggtgccgccg aacggagccc atccaccagg      6120
     gtgatatggt cttcgtctgc gatcctgcct tggcccgacg agagtggcgc aagggcatcg      6180
     tggaggagat ctacagcgga gctgatggag tcgtcagacg cgctaaggtg cgcgtgaacg      6240
     acaacggcct acctaggaca atgatgcgac ccgtctctaa acttgcagtt ttggatttga      6300
     gtgaagcggt tcttcacggg gtcggggatg tcgcggatcg aatattgtta tcgataggct      6360
     agtattttga gaagtccgaa tgtggacgga tttgtaagcc catatgtgtc tgggcacatt      6420
     gttttcgcca ttgtaaattg ccgggaaaat ttagcttttc attgtcgtgc aagagttgga      6480
     ggacacactg cggtgagcta ataagttaag ttagttacaa ttgtaaaaca ttaattcttc      6540
     cagaataaaa cgctttctac taccacgaat tagtctgccc tttctttcgg gaaccaatgc      6600
     gtggagtagc cgtttaaggc aactccttgt gacgcacgac gaca                       6644
//
ID   DV26847    standard; DNA; INV; 691 BP.
XX
AC   U26847;
XX
DR   FLYBASE; FBgn0011601; Dvir\Helena.
XX
FT   source          U26847:11..701
FT   SO_feature      CDS ; SO:0000316:<3..540
FT                   /db_xref="FLYBASE:FBgn0026901; Dvir\Helena\RTase"
FT                   /db_xref="REMTREMBL:CAB35346"
XX
CC   Derived from U26847 (Rel. 63, Last updated, Version 2).
CC   Michael Ashburner, 18-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 691 BP; 235 A; 167 C; 145 G; 144 T; 0 other;
     TGCGGATGCA TATCCCTCCA ATTCAGCTTG AAGGAGTTAC CCTGGAGCAG CCGCCACAAG        60
     CTAAGTATCT CGGCATCACC TTAGACAAGC GCCTTACCTT TGGGCCACAC CTCAAAGCTA       120
     CGGTAAAAAA ATGTCGGCGC AGACTGCAAC AACTGCGGTG GCTCAACAAC AAAAGGAGCA       180
     CCCTGCCGCT GAGATGCAAA AGAGCTGTAT ATGTGCACTG TATTTTGCCG ATATGGCTCT       240
     ATGGAGTGCA GATTTGGGGG ATTGCAGCCA AATCAAATTA TAAACGCATA CAGGTACTGC       300
     AGAATCGGGT ATTACGACAG ATAACCAACT GTCCCTGGTA CGTACGCGGT TCTACACTCC       360
     ATAAAGACCT CAAAGTGCAC ACAGTCGAAG AACAGATTGG AAGGCACACA AGCAGATACA       420
     GCGACAGACT GCTGAGACAC CGCAGCCTGC TCGCCAGAGG ACTACTCCCT GCCCAACCTC       480
     TAAGGCGACT CAAACGGCAA GGTTTTGCCA AGACGATTGG GCGCCAGTAA GACCACCCGC       540
     ATTAAAATCC TCATACTACG TTATGGGGTT CGGCTCTAAA TAACATTTCT ATCCATGTGT       600
     TGTTAAGGTA CTAACCATTA TGATTGTTAC AGGTTCTACA CTTAATAATA AAAAAAAAAA       660
     AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA A                                      691
//
ID   DV49102    standard; DNA; INV; 4158 BP.
XX
AC   U49102;
XX
DR   FLYBASE; FBgn0015679; Dvir\Penelope.
XX
FT   source          U49102:1..4158
FT   SO_feature      CDS ; SO:0000316:617..3190
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044148; Dvir\Penelope\ORF1"
FT                   /db_xref="SPTREMBL:Q24736"
FT                   /protein_id="AAA92124.2"
FT                   /translation="MERSPEPSININGRHAVCTATNMSYAKIKTKYKDSKRTINKFQLT
FT                   LVKLTKLKSSLKFLLKCRKSNLIPNFIKNLTQHLTILTTDNKTHPDITRTLTRHTHFYH
FT                   TKILNLLIKHKHNLLQEQTKHMEKAKTNIEQLMTTDDAKAFFESERNIENKITTTLKKR
FT                   QETKHDKLRDQRNLALADNNTQREWFVNKTKIEFPPNVVALLAKGPKFALPISKRDFPL
FT                   LKYIADGEELVQTIKEKETQESARTKFSLLVKEHKTKNNQNSRDRAILDTVEQTRKLLK
FT                   ENINIKILSSDKGNKTVAMDEDEYKNKMTNILDDLCAYRTLRLDPTSRLQTKNNTFVAQ
FT                   LFKMGLISKDERNKMTTTTAVPPRIYGLPKIHKEGTPLRPICSSIGSPSYGLCKYIIQI
FT                   LKNLTMDSRYNIKNAVDFKDRVNNSQIREEETLVSFDVVSLFPSIPIELALDTIRQKWT
FT                   KLEEHTNIPKQLFMDIVRFCIEENRYFKYEDKIYTQLKGMPMGSPASPVIADILMEELL
FT                   DKITDKLKIKPRLLTKYVDDLFAITNKIDVENILKELNSFHKQIKFTMELEKDGKLPFL
FT                   DSIVSRMDNTLKIKWYRKPIASGRILNFNSNHPKSMIINTALGCMNRMMKISDTIYHKE
FT                   IEHEIKELLTKNDFPPNIIKTLLKRRQIERKKPTEPAKIYKSLIYVPRLSERLTNSDCY
FT                   NKQDIKVAHKPTNTLQKFFNKIKSKIPMIEKSNVVYQIPCGGDNNNKCNSVYIGTTKSK
FT                   LKTRISQHKSDFKLRHQNNIQKTALMTHCIRSNHTPNFDETTILQQEQHYNKRHTLEML
FT                   HIINTPTYKRLNYKTDTENCAHLYRHLLNSQTTSVTISTSKSADV"
XX
CC   Derived from U49102 (Rel. 69, Last updated, Version 4).
CC   Michael Ashburner, 18-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 4158 BP; 1694 A; 817 C; 666 G; 972 T; 9 other;
     gatcgaaaaa agcaacgtcg tttaccaaat accatgtggc ggggataaca acaacaagtg        60
     caatagtgtc tacataggta caacaaaatc gaagctaaaa acaaggatta gtcaacataa       120
     atcggacttc aaactaagac atcaaaataa tatacagaaa acagcactta tgacccattg       180
     tataagaagc aacccacaca ccaaattttg atgaaacaac aatcttacaa caagaacaac       240
     actataacaa gcgacacaca ttggaaatgc tacacataat taacacacca acctacaaac       300
     gactaaacta caagacagac acagaaaatt gcgctcactt gtacagacac ctcttaaaca       360
     gtcaaacaac ctcagtaaca atctccacgt caaaaagcgc agacgtgtaa aataatgtat       420
     gtaaaatgtt cgaaataatg tttaatttat tgtattataa ttgttaattg ttttttgtat       480
     cttggtgtta gtgccctgaa gacggtttgc cgatgtgcaa ccgaaatata tcggaagaga       540
     attgaataaa attgtttttc attgtttgtt ttaacaaact cggacctcga gccagccaac       600
     aaataaatat tgaaatatgg aaaggtcgcc agagccatca ataaatatca acggaaggca       660
     cgccgtatgc acagcaacca acatgagcta cgcaaaaata aaaactaaat acaaggattc       720
     gaaaagaaca attaataaat tccaactaac actggtaaaa ttaactaaac ttaaatctag       780
     tttaaaattt ttgttaaaat gtagaaaatc aaatttaata cctaacttca tcaaaaactt       840
     gacacagcat ttgaccatac tgaccactga caataaaacc caccctgaca taacaagaac       900
     attgactaga cacacacatt tttaccatac caaaatatta aacttactta taaaacacaa       960
     acacaaccta ttacaagaac aaacaaaaca tatggaaaaa gcaaaaacaa acatagaaca      1020
     actgatgacc acagatgacg caaaagcgtt ttttgagagc gagagaaata tagaaaacaa      1080
     aataacaaca acactcaaga aaagacaaga aacgaaacac gataagttac gagatcaacg      1140
     gaacctagcc ttagcggata acaacacgca aagagagtgg tttgtaaaca aaacaaaaat      1200
     agaattcccg ccaaacgtcg tagcgttact cgcaaaaggg ccgaagttcg ctctcccaat      1260
     cagcaagaga gattttcctc tcttgaaata catcgcagac ggtgaggagc tagtgcaaac      1320
     aataaaagaa aaggaaacac aagagtcggc gcgcacaaaa ttctctttgt tagtcaaaga      1380
     gcataaaacc aagaacaacc aaaacagtag ggatcgagca atactggaca cagtggaaca      1440
     gacacgaaaa ttactgaaag aaaatataaa tattaaaatt ctatcgtcgg ataagggcaa      1500
     caaaaccgta gcaatggatg aggatgaata taaaaataaa atgacaaata ttttagacga      1560
     cttatgcgcg tatagaacat tgagactgga tccgacatca agactacaga caaagaataa      1620
     caccttcgta gcacaattat tcaagatggg tcttatttca aaggacgaaa gaaataagat      1680
     gactacaaca acagcggtac ctccgaggat atatggacta ccaaaaatac acaaggaagg      1740
     aactccactg agaccaatat gttcttccat aggatctcca tcttacgggc tgtgcaaata      1800
     tataatacaa atattaaaaa atctgacaat ggactctagg tacaacatca agaacgcggt      1860
     agattttaaa gacagagtca acaactccca gattagagaa gaggaaacat tagtatcttt      1920
     tgacgtagta tccttatttc ccagcatacc aatagaatta gcacttgaca caataagaca      1980
     aaaatggacc aaattagaag agcacacgaa tataccgaaa caactattta tggacatagt      2040
     tagattttgc atagaggaaa acagatattt caaatacgaa gacaaaatat acacacaact      2100
     taagggaatg ccaatgggat caccggcttc cccagtaatc gcagatatat taatggagga      2160
     actgttggac aagattacag ataaattaaa aattaaacca agactcttga ccaaatatgt      2220
     agatgacctt tttgccataa cgaacaaaat agacgtggaa aatattctaa aagaattgaa      2280
     ttccttccac aaacagataa aatttacaat ggaattagaa aaggacggga aattaccatt      2340
     tttagactct attgtaagca gaatggacaa cacactcaaa ataaagtggt ataggaaacc      2400
     catagcctcc ggacgaatac tcaacttcaa ttcaaaccac ccaaagagta tgataatcaa      2460
     tacagcacta ggctgtatga atagaatgat gaaaatatcg gacacaatat accacaaaga      2520
     aattgaacat gaaatcaaag aacttttgac caaaaatgac ttccccccaa atataatcaa      2580
     aacattatta aaaagacgac aaatcgaaag aaaaaagcca acagaacctg ctaaaatata      2640
     caaatcacta atatatgtac cacgactatc agaacgcctc acaaactcag actgttataa      2700
     caaacaagat ataaaagtag cacacaaacc gacgaataca ttacaaaaat tcttcaacaa      2760
     gataaagtcg aaaatcccga tgatcgaaaa aagcaacgtc gtttaccaaa taccatgtgg      2820
     cggggataac aacaacaagt gcaatagtgt ctacataggt acaacaaaat cgaagctaaa      2880
     aacaaggatt agtcaacata aatcggactt caaactaaga catcaaaata atatacagaa      2940
     aacagcactt atgacccatt gtataagaag caaccacaca ccaaattttg atgaaacaac      3000
     aatcttacaa caagaacaac actataacaa gcgacacaca ttggaaatgc tacacataat      3060
     taacacacca acctacaaac gactaaacta caagacagac acagaaaatt gcgctcactt      3120
     gtacagacac ctcttaaaca gtcaaacaac ctcagtaaca atctccacgt caaaaagcgc      3180
     agacgtgtaa aataatgtat gtaaaatgtt cgaaataatg tttaatttat tgtattataa      3240
     ttgttaattg ttttttgtat cttggttgtt agtgccctga agacggtttg ccgatgtgca      3300
     accgaaatat atcggaagag aattgaataa aattgttttt cattgtttgt tttaacaaac      3360
     tcggacctcg agccagccaa caaataaata ttgatattaa atgataaagc tatatataat      3420
     taactgaatc cacaaataaa caaaccaggt caagtagatc tggttctcgg cagctgacct      3480
     aacacactca tttttttaaa attgaaataa tnnanatagc gggcttctcg gccagaacac      3540
     agaattcggn cganattcaa aggagaggnn anatagtcgc gtcagccatt gaggttaaag      3600
     atttggaaag attttgagag ttagaagaat aaaacaaaga acatgcagaa taccctgaac      3660
     cctcaacttc caacatcaaa tacgatatat attcttctct agaagctata tgtcatgttt      3720
     ggatcctagc tcttattatt taccaaaatt cccaaaaaac acgatatcga tatcgatttt      3780
     tatcgattgc ttggaaacgg agtagtttat cgattatcgg aaacaatatc gatctgcgct      3840
     ggcactagga gcacctacat ctaaaatttc aagtctctac cgcttatagg ttctgagatc      3900
     cttgcgttca tatatacgga cggacggacn gtatacggac ggacagacat acgcatagct      3960
     agatcgactc ggctattgat gctgatcaat atatacactt tatgggctcg gagatgctac      4020
     cttctgcctg ttacatacat ttggattttc acaatacccc ttacaatata cccctatacc      4080
     catatttaat gggttcaggg tgtaagttca aagttccctt gccaggattc gaactggcaa      4140
     ctgaccgtat tacttgct                                                    4158
//
ID   DVULYSS    standard; DNA; INV; 10653 BP.
XX
AC   X56645; S37633;
XX
DR   FLYBASE; FBgn0004146; Dvir\Ulysses.
XX
FT   source          X56645:1..10653
FT   SO_feature      five_prime_LTR ; SO:0000425:1..2136
FT   SO_feature      three_prime_LTR ; SO:0000426:8518..10653
FT   SO_feature      polyA_signal_sequence ; SO:0000551:536..541
FT   SO_feature      polyA_signal_sequence ; SO:0000551:570..575
FT   SO_feature      TATA_box ; SO:0000174:580..584
FT   SO_feature      TATA_box ; SO:0000174:612..616
FT   SO_feature      polyA_signal_sequence ; SO:0000551:615..620
FT   SO_feature      polyA_signal_sequence ; SO:0000551:1138..1143
FT   SO_feature      primer_binding_site ; SO:0005850:2140..2150
FT                   /bound_moiety="tRNA-lys"
FT   SO_feature      CDS ; SO:0000316:3422..4870
FT                   /db_xref="FLYBASE:FBgn0044141; Dvir\Ulysses\ORF2"
FT                   /protein_id="CAA39966.1"
FT                   /translation="MGRRSATAEPSWRAGANANEFPGSLMRETDPCKGGSPGRLGGKNW
FT                   RNSLDLHGTWSSQKPRKTQCSNPAANAAIAQAHQRISACSAIWHQRVHPRGDASWLHGN
FT                   DEGHPLMCLGRQGAKPAETNTAPKPPRTCRAGTANRRHPERTEVFQREHSTTVPPKPRR
FT                   QAHRAEYSSSSPVYVADAQSRNWRNPNNRHFRVEDRRADDFQPEEAYANVRETAYMKLE
FT                   RWNVKFDGEDAMNSVEDFVFRLEFLQRQYQCPWKEVLRGFHLLLTGRAREWYWMHVRHS
FT                   RVDSWMQLRHALLDRFRGYQTEHEVMQELLQREQQASEGVDDYIHHMRQLAARFQKPLR
FT                   DRELVRIIKRGLKESLAKYIYAMDVLTVDELRQECLEVERHMGRRSRTGYLQPSRCPQG
FT                   TRPVVHEVEVPPHLTETPPGELEEAFVRTRNSSELYAGTRDSSTTSLETACPRSGKYSA
FT                   IGVESRTRSARSVKTVRETPEGAR"
FT   SO_feature      CDS ; SO:0000316:4836..8027
FT                   /db_xref="FLYBASE:FBgn0044142; Dvir\Ulysses\ORF1"
FT                   /protein_id="CAA39967.1"
FT                   /translation="KLSGKPQRERGDGGTDAFRDGDRGKAGEGHLPEPIIIGKETEIWN
FT                   KDQDKANYNNSISKGGTLRGLPYEERVRAYMSARNRIFGERQLEGMTLATRRMVKARAR
FT                   FRRRRITRRQVVEAVRREESIDPRVFAEVEVAGAKMKGLLDTGASVSLLGQGCRELVEK
FT                   LGWEARPYESMVRTACMGANRPILGRVVLPVKYGIERLDIVFYMCPDLRQELYLGIDFW
FT                   RAFEIAPELLGPARKSETPPEASEVTVANPEVAYYRDDDDCVTDPEMWDLDNDQRSQLE
FT                   SVKRRFLQFEKDGLGKTHLLQHRIQLIEGAEPVKDRLNPLSPAKQEIVWAEVDKMLKLG
FT                   IIEESDSPWSNRTTVVMRPGKNRFCLDARKLNSVTVKDAYPLPCIEGILSRSTRLILSL
FT                   ASTLSSRSGNRDGGEEQGVYGVYCTRRPLYQFRHMPFGLCNAAQHFEAHDKVIPANLRS
FT                   NVFVYLDDLLIISADFPTHLKYLELVAECLRNANLTIGMAKSKFLFRNLNYLGFIQLRR
FT                   RTWRMDPGRVEAIRNIPNPRTVKELRSFLGTAGWYRRFIKNFAEISVPLTDALKKRTGR
FT                   FVLSDEAIEAIESLKLALTTAPVLVHADFRRPFFIQCDASHYGVGAVLFQLDDEQQERP
FT                   IAFFSAKLNKHQINYSVTEKECLAAKLAIHRFRPYVEMMPFTVITDHASLQWLMSLKDL
FT                   SGRLARWSLELQAFPFSMQYRKGADNVCRHIVRSVEEVELTPEDLLGFQTPEFESPNIE
FT                   ELIREVMSQQGKFPDLSSGRTDFSSRGTVHESLEDEVEGTSWKLWVPESLTAGLIQQAT
FT                   RRTRRSAHGGMRKTLHALARQYYWPNMAIQVRDYVRKCDTCKETKAQNYRMQVGIGEEV
FT                   RTDRPFQKLYIDFLGKYPRSKRGHAWIFVVVDHFSKFTFLKAMREATAADVVNFLVHEV
FT                   FFKFGVPEVIHSDNGRQFVSKSFDAMVQAFGITHLRTPVYSPQSNAAERVNRTVLSAIR
FT                   TYLGQDHREWDAYLPEVEVAIRNAVHSGYGSHSVLRGLWTADVPEWFQLQTGQEAVDHW
FT                   PTTVFLTLTQRTDWL"
FT   SO_feature      polyA_signal_sequence ; SO:0000551:9053..9058
FT   SO_feature      polyA_signal_sequence ; SO:0000551:9087..9092
FT   SO_feature      TATA_box ; SO:0000174:9095..9100
FT   SO_feature      polyA_signal_sequence ; SO:0000551:9101..9106
FT   SO_feature      TATA_box ; SO:0000174:9129..9134
XX
CC   Derived from X56645 (Rel. 38, Last updated, Version 6).
CC   Michael Ashburner, 18-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 10653 BP; 2889 A; 2390 C; 2887 G; 2487 T; 0 other;
     tgttgcattt gacgttatcg gcagcaccga gggttactca gttggttgcg tgcgatatta        60
     tgggccactg ccgatatctt tttggcatat ggtcggagta tgccgggtga agctgggccc       120
     acggcggacg caaaattttg aagggtggca acgccagaca tgcgatccac ggcgccaaaa       180
     gcgacgattg ctattggccg cccgtttcgc tcttaaaggg aatacgagga gagtggatcg       240
     catgcccttg gatatgccct tggccttcat ttgggccgtt gacccaaaaa aatgcagctg       300
     tgcagatgag cagcaacggt gcccgcctcg caaatgtatg cgtgtgccga aattcggcac       360
     cgatggtgtg gctgaaaaaa aatgtcgagg agttcgattt gttcagcggt taacggcggg       420
     cgtgccagct cgaagtgagc aaaaaagttg gacattgcat ttctgcttga cagagtaaaa       480
     ttttttccct tctgaaaaat taagccggca cataatacca atggcttaac agacgaataa       540
     aagttttgtt tttgtgttct ttgccatgta ataaatttat ataaatcaaa ccgctcgaat       600
     cacaaagaaa atataataaa aaaattgaaa gagacttaaa aatttaagtt gcgacgagag       660
     acgaaccaaa taagccaaaa attaacggct ccggcaccaa ggagaccggc tcgcgcacca       720
     gagaggccca cgaaatattc aaggccagga ttcagtgcag cggcgcaaac cagccatatc       780
     cgcgacgtcc gccagcaagc gtcggcgcaa acgtgaaggc gacgagacga gccaccaacg       840
     accgggctcc aacaacgaag aagtcggtcc acaggcgtag accccggtcc cacatccacc       900
     gtagtgagtc cgttccattg ttctggccca tccctcggtt cgagcccctg gcatgagttc       960
     agaagaattg actcctaatt gcactccctg aaaaggagta gatttttttt tatcgttaaa      1020
     tttggttaat ttgtatttat aaaatatatt catacataca taggcactta cgccgagctt      1080
     cactttagag tgcgagcggt gaggaaaact ccaacggtga tgcatctgcg cctgtaaaat      1140
     aaaaaaaaaa aaaaaatcta aaattaactc ttgcgcgaac tatgctcaca tacttaccta      1200
     atttgaattt acgcatttat atcgcccctt accacccccc agagagctct ttaggtaggg      1260
     taaggtagaa ttaagcgatt taatacatac aatacacaat acgtgacata cccagtttta      1320
     agtaattgtg cgggccattg ttcctaaatc ggggcaacga ttgcctctaa agtgcctcat      1380
     tgcgcgtttc ttttgcggcg actagccaat atccttgtag tgtttcgtcg cctgttccgt      1440
     tcagtgttgt aaaaaaaaaa aaaaaaaatt aattctataa gataagagaa aaatttagga      1500
     attaatgcgc tgtgtcaatt agtataagta tatgcagcag taatacgcac ctgtgaagtt      1560
     aatgaattat ccgcttgcat gagatcctga acagctgcaa gataaatgcc ataagcaatg      1620
     attatgattg ttatacattt taagaaaacg caaccaatta tacgcaccta ttgaaagaaa      1680
     tcatgtccgg ctaaaataat attgctgggg agagtgggca ttatggccga cacgggctaa      1740
     tataggccat ttggtggcca aaatgaggga gacgagtgga ggtgatcgtc tcatggtagg      1800
     gcgggtacgc tgggtccgga accggggccc gatctggaag agtaaggtgg ataaatagtg      1860
     tttttttttg ttaatttata ttgagtgtct tacctttgtt gtttacattt tcatagttgt      1920
     tacagctgtg gattttgttc atgagttagt agttccgaat atttgttatc gattatgcgg      1980
     ttcattttga gtagtgttgt gtgagtctat tttgctacag acgtgtagct ttgttgttat      2040
     cgattgtgcg gactgcgggc cagggatggg accacaccca gagaatccga tgagccagcc      2100
     ggcgcggccc actgagaaac aagcagttcc ctaacaatat ggcgcccaaa ttgaagaagc      2160
     actcggcttc tttgaagtcg gtgtgtaatc aaagaaaaat aaatacgata aaaatgaagg      2220
     tacagaggaa aggactccct tggcttcagg accccacacc gctgaagtct tatgtcggca      2280
     gagtaggtag ctcataatgc gcacggtgta gtggaatccg agaagcacga cggaagtaga      2340
     ggttatctga atatccatcc ataagcatga ggggtttttt ttgtagtggt tgatggccgt      2400
     tcgcatgttg gcgaaacatt tgcgactatc catcgttcgc ctggtggtag ccgcaacgac      2460
     aaaggcatct catggttaaa aaaatgtgat attagggtag tttagtcaga tgttatttat      2520
     tcaattagtt gtttttgtct cattttgtgt taatgttgat gtatgctggc cgtagttata      2580
     cgagcttcgg agaccggttg acccagacga tatagagccg agcctgcgcc gcatctgtca      2640
     cacagcatat cccaagaatg gccagaagag cgacggagaa cggatcttgc catggtgtcc      2700
     attgacatgg ggtgttttct tgtcgcggtt gatgactggt aagtcacgtt tgctagttgg      2760
     tgaacgttcg cgaccgtcaa tcgtagcctg gtggtagccg ccatgacaaa ataacctgtg      2820
     aacgaaatgt gatattaggg taggtctgac tagagtttgt ttaatgtttt caatttgttt      2880
     tgtcccactc tgtgttaacg tttggtgtgt gctggccgta gttaaatgag cttcggaggc      2940
     aggtgaccca ggacgatata gagccgatcc tggcgccgca cctgtcacgc agcatactct      3000
     aagggtgcac agaagtgcga cagaaaccaa tagccttcaa ggtagcgttc cttgcatgcc      3060
     gtccgtcagt caaactgacg aactgagcat gggacgaatg ccttaagtgt tgtccactgt      3120
     ccagattatg cgtagattat ttagcctgtg ttaggatttg tcgtctctcc ccaagtattt      3180
     gaaattaatt agaaagaaaa caaaattttt gtgaagtggt ttttgtggat caatgtgtat      3240
     taatttatta ttctttatta gtaagatttg ttagtgggat gtttatttat ttattaattt      3300
     attagaaata ttagtaaagt ttttataagg gttgtacgcc ttgtagaaga tagggggtac      3360
     tgttctcaga aggaataagt atggctgaga aacaggtgtc tgattgggct tctgacgact      3420
     gatggggcgt cgctctgcca ccgccgagcc cagctggagg gctggtgcga acgccaatga      3480
     atttccgggg agtttaatga gagagacaga tccctgtaaa ggagggtcac ctggtagact      3540
     tggaggaaag aattggcgca acagcctaga cctccacgga acctggagtt cccaaaagcc      3600
     ccgaaagact cagtgctcaa atccggcggc aaacgcggcg atcgctcagg cccaccaaag      3660
     gatatctgca tgctctgcca tctggcatca gcgagtccat ccgcgaggag atgcgagctg      3720
     gcttcatgga aatgatgaag ggcatccatt gatgtgctta ggccgccagg gagccaaacc      3780
     cgccgaaact aacactgcgc cgaagccgcc aaggacatgt cgagccggga ccgcgaacag      3840
     gcgccatccc gaaagaacgg aagtgttcca gcgcgagcat tccaccaccg tgccaccgaa      3900
     gccacgtagg caagcgcaca gggcggagta ttcgtccagc agcccagttt acgtggcaga      3960
     tgctcagtcg aggaactggc gtaacccgaa taaccgccat ttccgagtag aggaccggag      4020
     agcggatgat tttcaaccgg aggaggcgta cgccaacgtg cgagaaactg cgtacatgaa      4080
     gctcgagcgg tggaacgtca agtttgacgg cgaggacgcg atgaattcgg tcgaggactt      4140
     cgtgttccgc ctagagttcc tgcagaggca gtatcagtgc ccgtggaagg aggtcctgcg      4200
     cggtttccac ctgctcctga ccggccgcgc ccgcgagtgg tactggatgc acgtgcggca      4260
     ttctagggtc gacagctgga tgcaactgcg gcatgccctc ttggacaggt tccggggcta      4320
     ccagacggaa cacgaggtaa tgcaggagct tctacaacga gagcaacagg ccagcgaagg      4380
     ggtggatgat tatatccacc acatgcgtca actcgccgcg cgattccaga agccgctgag      4440
     agaccgagag ctggtgagga ttataaagcg tggtttaaaa gaaagtctgg cgaaatatat      4500
     ttatgccatg gacgtactca ccgtggatga gctgcgccaa gagtgcctag aagtggagag      4560
     gcacatgggt cgcagaagcc ggactgggta ccttcagccg tcgcgttgtc cacaaggaac      4620
     gaggcccgta gtccacgagg ttgaagttcc accgcatctt acagaaacgc caccgggaga      4680
     actggaggag gcattcgtgc gaacgaggaa ctcatccgaa ttgtatgctg gaactcgaga      4740
     cagttcgacc acgtctttag agactgcctg tccaaggagc ggaaaatatt ctgctatagg      4800
     tgtggaaagc cggacacgtt ctgctcgcag tgtgaaaact gtccgggaaa ccccagaggg      4860
     agcgcggtga tggcgggaca gacgcgttcc gggacggcga ccgcgggaaa gcaggagagg      4920
     ggcacctacc agagccaata atcattggaa aggagacgga gatttggaat aaggatcagg      4980
     ataaggctaa ttataataat agtataagca aaggaggaac acttaggggc ttaccatacg      5040
     aagaacgtgt tcgggcatac atgtcggccc gaaatagaat ttttggtgag cgacagctgg      5100
     aggggatgac gctagccacc cggagaatgg tgaaggcacg tgcgcgcttc cgcagacgca      5160
     ggattaccag gcgccaggtc gtcgaagcgg tgagacggga ggagagtata gacccacgag      5220
     tattcgccga agtggaggtc gctggagcca aaatgaaagg gttgctggac acgggggcct      5280
     cagtcagtct gttgggacaa ggatgccggg agttagtgga gaaactggga tgggaagcgc      5340
     ggccatacga atcgatggtg aggacagcat gcatgggtgc caatcgccca attttaggtc      5400
     gcgttgttct gcctgtgaaa tacggaatag aacggttaga tatcgtattt tacatgtgcc      5460
     cggacctgcg acaggaacta tacctgggaa tcgacttctg gcgagccttt gagatcgcac      5520
     cagagctgct cggtccggcc agaaagtccg aaacaccacc agaggcatct gaggtaacgg      5580
     tagcgaaccc agaggtggct tattaccggg acgacgacga ctgcgtaacg gatccggaaa      5640
     tgtgggacct ggacaacgat cagaggagtc agttggaaag cgtgaagcgc agatttctcc      5700
     aatttgagaa ggatggccta gggaaaactc acctgctgca gcaccgaatt cagctgatcg      5760
     agggagcaga acccgtgaaa gacagactta atccgctgtc cccggccaaa caggagatcg      5820
     tgtgggccga ggtggataag atgctaaagt tgggcatcat cgaggagagt gacagcccct      5880
     ggagcaaccg gacgacggtg gtgatgaggc ctgggaagaa caggttttgc ttagacgcca      5940
     ggaaattaaa cagtgtaacg gtaaaagacg cgtacccgct tccatgcatc gagggcatcc      6000
     tatcgcgatc gacgagactc attttatctc tagcgtcgac cttaagttcg cgttctggca      6060
     atagagatgg aggagaagag cagggcgtat acggcgttta ctgtaccagg aggccgctgt      6120
     accagttccg ccacatgcca ttcgggctct gcaacgccgc tcaacacttc gaggctcatg      6180
     acaaggtaat cccggcgaat ctgaggtcca acgtattcgt atacctggac gacttgctga      6240
     taatatcggc agattttcca acgcacttaa aatacttgga attggtggcc gagtgtctga      6300
     ggaacgcgaa cctcaccata ggcatggcga agtcgaaatt cctgttccgc aacctaaact      6360
     acctgggttt cattcaatta aggcggcgga cgtggcgcat ggatccggga agggtagaag      6420
     cgatccggaa catcccgaat ccgaggacgg tcaaggaact acgaagcttc ttaggtacgg      6480
     cggggtggta ccgccgattc ataaagaatt tcgctgagat atcggtaccg ttgactgatg      6540
     cccttaagaa gagaacgggt agatttgtgt tgagcgacga ggccatagaa gccatagaga      6600
     gcttaaagtt agccctcacc acagccccgg tgttagttca cgcagatttt cgaagaccat      6660
     tcttcatcca atgcgacgca tctcactacg gagtaggagc tgtgttgttc cagctagacg      6720
     acgaacaaca ggaaaggccg atcgcattct tctcggccaa actcaacaag caccagatca      6780
     actattcggt gaccgagaag gaatgcctag ccgccaaact ggccatacat cgattccggc      6840
     cgtacgtgga gatgatgccg ttcacggtaa tcaccgatca tgcgagtctg cagtggctta      6900
     tgagtctcaa agacttgagc gggagattag ccaggtggtc cctcgaactg caagcgttcc      6960
     ctttctccat gcagtaccgc aagggagccg acaacgtgtg cagacacatt gtccgaagcg      7020
     tggaagaggt cgaactgacc ccggaagatc tgttgggatt tcagaccccg gagttcgaga      7080
     gtccgaatat cgaggagctg ataagagagg tgatgagcca acaagggaag tttccggacc      7140
     ttagcagtgg caggacggac ttctcttcaa gagggaccgt gcacgagagc ttggaggatg      7200
     aggtcgaagg cacaagttgg aagctctggg tgccggagtc gctgacggca ggactcatcc      7260
     aacaagcgac acggcggacg agacgctcag ctcatggagg catgaggaaa acgctgcacg      7320
     cgctggccag gcaatattat tggcccaaca tggccataca agtcagggac tatgttcgga      7380
     aatgcgatac atgcaaggag accaaggcac agaactaccg aatgcaggtc ggaattgggg      7440
     aagaagtgcg caccgaccgc cccttccaga agctatatat cgacttcttg gggaagtatc      7500
     cacggtcgaa acgagggcat gcgtggatat tcgtcgtcgt agaccacttc tcgaagttta      7560
     ccttcctgaa ggccatgagg gaagccaccg cggcggatgt cgtgaacttc ctagtgcatg      7620
     aggtgttctt caaatttggc gtgccggaag tgatccattc ggataatgga cgacaattcg      7680
     tgtcaaagtc gttcgatgcg atggtccagg cgtttggcat tactcacctg cgcacaccag      7740
     tgtattcgcc tcagagcaac gccgccgaac gcgtgaaccg cacagtgctg tcggcaatcc      7800
     gaacctacct gggtcaggat catcgggaat gggacgcgta cctaccagag gtggaagtgg      7860
     cgatccggaa tgcggtccac agcggctacg ggagtcactc cgttcttcgc ggtctttgga      7920
     cagcagatgt acctgaatgg ttccagttac aaactggcca ggaagctgta gatcattggc      7980
     cgaccacagt atttctgacc ttgacgcaaa ggacagactg gctgtaatcc gaagccaagt      8040
     caaggaccac ctgcacaccg catacgagcg aagtcgccaa cggtacgacc accgcgcgcc      8100
     gacagctcca tctggaaccg ggacaggaag tgtggaggcg caacttcgca ctaagcagct      8160
     tcggcaaagc cttcaatgcc aagttcgccc ggaagttctt gaagagccgc gtcgtccgag      8220
     ccgtgggaac caacgcctac gagttggaag atctccaggg acgcgtgcta ggcgtcttcc      8280
     acgcaaaaga tatacgaaca taatcgtaat ttgctcacct ccttgccagg caacggcggc      8340
     ggcagcgcca gtccccccct ttttttttgg gtcagcaaaa aaaaaaaaat atagattact      8400
     tgtcgtgggt gtggcctacg ttgggcatcg ttattagccg gctgggtcaa tccatgaaat      8460
     gcgcacgcag attccttgta actgtccttc atgtcgttac aataatctgc gtggtgatgt      8520
     tgcatttgac gttatcggca gcaccgaggg ttactcagtt ggttgcgtgc gatattatgg      8580
     gccactgccg atatcttttt ggcatatggt cggagtatgc cgggtgaagc tgggcccacg      8640
     gcggacgcaa aattttgaag ggtggcaacg ccagacatgc gatccacggc gccaaaagcg      8700
     acgattgcta ttggccgccc gtttcgctct taaagggaat acgaggagag tggatcgcat      8760
     gcccttggat atgcccttgg ccttcatttg ggccgttgac ccaaaaaaat gcagctgtgc      8820
     agatgagcag caacggtgcc cgcctcgcaa atgtatgcgt gtgccgaaat tcggcaccga      8880
     tggtgtggct gaaaaaaaat gtcgaggagt tcgatttgtt cagcggttaa cggcgggcgt      8940
     gccagctcga agtgagcaaa aaagttggac attgcatttc tgcttgacag agtaaaattt      9000
     tttcccttct gaaaaattaa gccggcacat aataccaatg gcttaacaga cgaataaaag      9060
     ttttgttttt gtgttctttg ccatgtaata aatttatata aatcaaaccg ctcgaatcac      9120
     aaagaaaata taataaaaaa attgaaagag acttaaaaat ttaagttgcg acgagagacg      9180
     aaccaaataa gccaaaaatt aacggctccg gcaccaagga gaccggctcg cgcaccagag      9240
     aggcccacga aatattcaag gccaggattc agtgcagcgg cgcaaaccag ccatatccgc      9300
     gacgtccgcc agcaagcgtc ggcgcaaacg tgaaggcgac gagacgagcc accaacgacc      9360
     gggctccaac aacgaagaag tcggtccaca ggcgtagacc ccggtcccac atccaccgta      9420
     gtgagtccgt tccattgttc tggcccatcc ctcggttcga gcccctggca tgagttcaga      9480
     agaattgact cctaattgca ctccctgaaa aggagtagat ttttttttat cgttaaattt      9540
     ggttaatttg tatttataaa atatattcat acatacatag gcacttacgc cgagcttcac      9600
     tttagagtgc gagcggtgag gaaaactcca acggtgatgc atctgcgcct gtaaaatata      9660
     aaaaaaaaaa aaaatctaaa attaactctt gcgcgaacta tgctcacata cttacctaat      9720
     ttgaatttac gcatttatat cgccccttac caccccccag agagctcttt aggtagggta      9780
     aggtagaatt aagcgattta atacatacaa tacacaatac gtgacatacc cagttttaag      9840
     taattgtgcg ggccattgtt cctaaatcgg ggcaacgatt gcctctaaag tgcctcattg      9900
     cgcgtttctt ttgcggcgac tagccaatat ccttgtagtg tttcgtcgcc tgttccgttc      9960
     agtgttgtaa aaaaaaaaaa aaaaaattaa ttctataaga taagagaaaa atttaggaat     10020
     taatgcgctg tgtcaattag tataagtata tgcagcagta atacgcacct gtgaagttaa     10080
     tgaattatcc gcttgcatga gatcctaaac agctgcaaga taaatgccat aagcaatgat     10140
     tatgattgtt atacatttta agaaaacgca accaattata cgcacctatt gaaagaaatc     10200
     atgtccggct aaaataatat tgctggggag agtgggcatt atggccgaca cgggctaata     10260
     taggccattt ggtggccaaa atgagggaga cgagtggagg tgatcgtctc atggtagggc     10320
     gggtacgctg ggtccggaac cggggcccga tctggaagag taaggtggat aaatagtgtt     10380
     tttttttgtt aatttatatt gagtgtctta cctttgttgt ttacattttc atagttgtta     10440
     cagctgtgga ttttgttcat gagttagtag ttccgaatat ttgttatcga ttatgcggtt     10500
     cattttgagt agtgttgtgt gagtctattt tgctacagac gtgtagcttt gttgttatcg     10560
     attgtgcgga ctgcgggcca gggatgggac cacacccaga gaatccgatg agccagccgg     10620
     cgcggccact gagaaacaag cagttcccta aca                                  10653
//
ID   AF056940   standard; DNA; INV; 6868 BP.
XX
AC   AF056940;
XX
DR   FLYBASE; FBgn0013099; Dvir\Tv1.
XX
FT   source          AF056940:1..6868
FT   SO_feature      five_prime_LTR ; SO:0000425:1..452
FT   SO_feature      three_prime_LTR ; SO:0000426:6416..6868
FT   SO_feature      CDS ; SO:0000316:857..1642
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0028756; Dvir\Tv1\gag"
FT                   /db_xref="SPTREMBL:O76325"
FT                   /protein_id="AAC33317.1"
FT                   /translation="MTMELSEQHLNQALSQLRQVPSFDGSTDQLNAFIKRIDYILHLYP
FT                   TRDVRQHSILYGAIELQVTGDAQRISQRTAANTWQELRNALIEEYKVQTPFEELLRRLY
FT                   NTNYQGNVRKFIEELENKSFVILNKLALENIPSNTTLYTNAMNNTIKDVITKKLPDRLF
FT                   MMLARHDITSTQKLKQVAQREGLYENSVTEKPKNNNVQGNPNNNRRNMGNYQQNANPTT
FT                   ISSGYSNTNQSYHAQNKQHNKSEDNQKAHHEFPTEIKSR"
FT   SO_feature      CDS ; SO:0000316:<1416..4982
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0028755; Dvir\Tv1\pol"
FT                   /db_xref="SPTREMBL:O76326"
FT                   /protein_id="AAC33318.1"
FT                   /translation="MKIVLLKNLKIIMFREIQITIVGTWEIISKMLTQPPFQVVIPTRI
FT                   RVITHKINSIISPKTIRKLTTSFQQKLSQGRYQNPLNYQISPIHAECTKPSRLTSRDSN
FT                   SGQIRIWDNIGKFLFSKPREPNRNKSIHKNWIMELTKFLKCVIDTGSTINLMKTNRLNF
FT                   PVYNETLKVHTINGVIELKQSIRLGASKICPSKQKFYIHDFSEHYDVLIGREYLEACQA
FT                   KIDYAQGSVTLGEFNFCFRYNDEEVEEDMTAQECLDPPSTEDRPFNFAINNELIENNEF
FT                   RLEHLNSEEKEKIKKVLHEFVISSYHEGDNLTFTSYNLNTKFLTKHEDPIYKRSHTNIL
FT                   QLSNEEVIPFSDLIKPIPNGLPVIIVPKRNDAFGKPKFRLVIDYRHFNELTINDKYPIP
FT                   IMDEILDKLGKCQYFTTIDLAKGFHQIQMDPGSIPKTAFSTKHGHYEYTRMPFGLKNAP
FT                   ATFQRCMNNLLEDLIFKDCLVHLDDIIIFSTSLEEHILSLQKVFKKLREANLKLQLDKC
FT                   EFMRKETEFLGHIITTEGIKPNPNKIQAIVKFPIPKTPKEIKSFLGLCGFYRKFIPNFA
FT                   NIVKPLTLKLKGSKINIKDRDYELAFEKLKVLITSDPILIYPNFEKPFSLTTDASNMAI
FT                   GAVLSQEHKPICYASRTLNEHELNYSTIEKELLAIVWATKYFRSYLFGRQFQILSDHRP
FT                   LVWLNNMKEPNMKLQRWKIKLNEFDFQIKYVPGKENYVADALSRIQLNENFLGEDTIST
FT                   RATIHSAQEDNSNHLQITERPLNYYNRQIEFEKGTENETKVTNYFHKTNIKITYKDMTN
FT                   THAKELIKEYLCTKKSVLYFHNEADFPIFQEAYLEIISPNNSTKAMKTSTKLIDLQTYA
FT                   EFKELILKKHKELLHPGIEKTINWFKETHYFPDYQNLINECETCNIAKTEHRDTKLTFE
FT                   ITPEIANIREKYVMDFYIVGDKQFLSCIDIYSKFASLIEIKSRDWLETKRAILQVFNQM
FT                   GKPIEIKADKDSAFMCTALQLWLKSEAVNINITTSKNGISDVERFHKTVNEKLRIINSD
FT                   SDVENKLTKFETILYTYNHKTKHKTTNRTPADIFIYAGTPEYDTQANKEKLINNLNKKR
FT                   TNYEIDTRYKHSPLVKSKTTTPFKKTGELRQIDDKHFEETNRGRKITHYKTKFKKKKKT
FT                   NQSKYNNYRSTTDSDQNIQAPA"
FT   SO_feature      CDS ; SO:0000316:complement(5005..5292)
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044143; Dvir\Tv1\epigene"
FT                   /db_xref="SPTREMBL:O76327"
FT                   /protein_id="AAC33320.1"
FT                   /translation="MLTKPLLLRLAIFKPFISLFNFSTRYSICIRLLNSLLCSIKLLKV
FT                   SSVFVILTVKQWEFVICRNVYGSCFKYEISVMGFDRINFNTLCIYIVYSY"
FT   SO_feature      CDS ; SO:0000316:5445..6110
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0028757; Dvir\Tv1\env"
FT                   /db_xref="SPTREMBL:O76328"
FT                   /protein_id="AAC33319.1"
FT                   /translation="MNELDQEKQKGKKLDILIFNLQHFTEYIEDIEMGMQLTRLGIFNP
FT                   KLLKHDYLLHVNSEKLLNTKTSTWFKSDTNEILIISHIPREIIKSPVFEIIPYPDENNN
FT                   ILTEIAHEKYFTQDKKVYSRETKKLINNKCLTGILNQITSECSYTKILQNFQINYIEPN
FT                   IILTWNLPKTILNHNCINNEITIEGNNIIKIFNCSLQINEISISNNMLDYTSKHLRRQ"
XX
CC   Derived from AF056940 (Rel. 62, Last updated, Version 4).
CC   Michael Ashburner, 18-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 6868 BP; 2840 A; 1292 C; 1004 G; 1732 T; 0 other;
     agtgacatat ccatagtcgc acccaccctt taacataact tagcacataa gcataagcac        60
     aattataaac atttctaata ttgtaaacaa agagcctggt gataacatcg acattggtca       120
     agatcaaact gtcccccttt ggtagacata aacaattcac cctaaatatc acgccactgt       180
     ggtagacata aacaattcac cctaaatatc acgccactgt caatgttccc atcagagtac       240
     tatcccacgc ataattgctg acgcagctca aacttcactc aattttgact caaactctct       300
     caaagcgaag tttgctaagc gaccgcaaca gttagataaa tcagttcata ttcgggaagc       360
     aaatctgaat gtactcaaca aaagtagccg ttaagtgaaa ataataaatt gaaatatatt       420
     tttttatagt aacctaacgt gtaaaactta attggcgcag ccggtaggat acgtcgggaa       480
     aaattaaaga tcgctaaagg ataattaatt cccagatcta acgcacaatc gcgaccgaaa       540
     gtgttgtcgg agttgtaata aaaattttcc tcgaatacgt atccgcacaa gaaccttccg       600
     gtccctagtt agcttaataa tattgaccct ttgggcaata aagctactac agttaataac       660
     gactggcttt gcatatcgtt tgatccctgc aatacgttat tactgagtct ttttaagaca       720
     cacacacaaa aaaaaaaaac atttaaccaa taatccatca caaactttaa cctaaaataa       780
     aagtgcaaaa tcaaagaaca ataaagttca aacctacaaa ctcaaaacta ttcaaaaaaa       840
     agtgtattac accaagatga caatggaatt atcagaacaa cacctcaacc aggccctttc       900
     acaacttaga caggtgccaa gctttgacgg atcaacggat caactaaacg ccttcattaa       960
     aaggatagat tacatcctac acctgtatcc aacccgagat gttagacaac atagcatctt      1020
     atacggagcc atcgaattgc aagtcacagg agatgctcag agaatatcac aaaggacagc      1080
     agccaacact tggcaggagc tgagaaacgc attgattgaa gaatacaaag tgcagacacc      1140
     atttgaagaa ctccttcgac gcttatacaa cacgaattac caaggaaacg tccgtaagtt      1200
     catcgaggag ctcgagaata aatcttttgt tatattaaat aagttagcac tagaaaatat      1260
     acctagcaat acaacccttt atacaaatgc tatgaataac acaatcaaag atgttattac      1320
     aaaaaaatta ccagataggc ttttcatgat gttagccaga cacgacatta cgtcgacaca      1380
     aaaactaaag caagtagctc aaagagaggg attatatgaa aatagtgtta ctgaaaaacc      1440
     taaaaataat aatgttcagg gaaatccaaa taacaatcgt aggaacatgg gaaattatca      1500
     gcaaaatgct aacccaacca ccatttcaag tggttattcc aacacgaatc agagttatca      1560
     cgcacaaaat aaacagcata ataagtccga agacaatcag aaagctcacc acgagtttcc      1620
     aacagaaatt aagtcaaggt agataccaaa atcccttaaa ctaccaaatc agtcccattc      1680
     acgctgaatg caccaaaccc tcccgactaa cgtcaagaga tagtaacagt gggcaaatta      1740
     gaatctggga taacatcggg aaatttttat tcagcaagcc tcgggaacca aacaggaaca      1800
     aatccattca taaaaattgg attatggaat tgacgaagtt cttaaaatgt gtcatcgaca      1860
     caggttcaac cataaatcta atgaaaacaa accgcttaaa ttttccagtt tacaacgaaa      1920
     cattaaaggt tcacaccata aatggtgtta ttgaattaaa acaaagtata cgcttaggag      1980
     caagcaaaat ttgtccgagc aaacaaaaat tctatattca cgacttctca gagcattatg      2040
     atgttctgat tgggagagaa taccttgagg catgtcaagc aaaaatagac tatgcacaag      2100
     gatccgtaac cttaggagaa tttaactttt gttttagata taacgacgaa gaggtcgaag      2160
     aggacatgac cgcacaagag tgccttgatc caccctcaac agaggacaga ccatttaact      2220
     tcgctattaa taatgaatta atagaaaaca atgagtttag gctagagcac ctaaactcag      2280
     aagaaaaaga aaaaataaaa aaagttttac atgaatttgt gatatccagt taccatgaag      2340
     gtgacaattt gactttcact agttacaatt taaacaccaa attcctaacc aaacatgagg      2400
     accccattta caagcgttcc cataccaata tcctccaatt atcgaatgaa gaagttattc      2460
     catttagcga tttgattaaa ccaattccta atggtttacc agtaataatt gttccaaaga      2520
     gaaacgatgc atttgggaag ccaaagttcc ggttagtcat agattaccgc catttcaatg      2580
     aactaactat taatgataaa taccctatcc cgatcatgga tgaaatatta gacaaacttg      2640
     ggaaatgtca atatttcaca accattgatc tagccaaagg cttccaccaa atccaaatgg      2700
     atcctggttc aatacccaag accgcatttt cgactaaaca tggccattac gagtacactc      2760
     gcatgccatt tggtcttaag aatgcacctg caacgttcca acgttgtatg aacaatctct      2820
     tagaagattt aatttttaag gattgtctgg tccacttaga cgacattatt attttttcca      2880
     cttcattgga ggaacacatt ttgtcgctac aaaaggtatt taagaagctt agagaagcta      2940
     acttaaaact acagttggat aaatgcgagt ttatgagaaa agaaactgaa tttctcggtc      3000
     acataatcac aactgagggt ataaaaccaa atcccaacaa gatacaagca attgtcaaat      3060
     tcccaattcc aaaaacccca aaagaaatta aatcatttct aggattatgt ggtttctata      3120
     ggaaatttat accaaatttc gctaatatag taaaaccatt aacacttaaa ttaaaaggga      3180
     gcaaaatcaa tataaaagac agagactacg aactagcgtt tgaaaagcta aaagtactca      3240
     taacatccga cccaatttta atatacccta acttcgaaaa accattttca ttaactacag      3300
     acgcgagtaa tatggcaata ggggccgtcc tttcgcaaga gcataagcct atatgctatg      3360
     caagtagaac tctcaacgag catgagttaa attattcaac gattgaaaaa gaattattag      3420
     caatcgtttg ggccactaaa tactttaggt cctatctctt tggtcgacaa tttcaaatcc      3480
     ttagtgatca cagaccactc gtctggttaa ataatatgaa agaacctaac atgaaattac      3540
     aaaggtggaa gatcaagcta aatgagtttg atttccaaat taaatacgtc ccaggaaaag      3600
     aaaattatgt ggcagatgct ctgtccagaa ttcaattaaa cgaaaacttc ttaggcgaag      3660
     atacaattag cacaagagca acaatacata gtgctcaaga agacaacagt aaccatttac      3720
     aaatcacaga aagaccactt aattattata atcgacaaat agaatttgaa aaaggaaccg      3780
     agaacgaaac aaaagttacg aattactttc acaaaaccaa cataaaaatt acgtacaaag      3840
     acatgactaa tacgcatgcc aaagaattaa taaaagaata cttatgcaca aagaaaagtg      3900
     tgctatactt ccacaacgaa gcagattttc caatttttca agaagcctac ttagaaataa      3960
     taagtccgaa taattcaaca aaggcaatga aaactagtac aaaattaata gaccttcaaa      4020
     catatgcaga attcaaagaa ttaatattaa aaaagcacaa agaattatta catccaggaa      4080
     ttgaaaaaac tatcaattgg ttcaaagaaa cccactattt cccagattat caaaatctaa      4140
     taaatgaatg tgagacttgc aacatcgcaa aaacagaaca cagagataca aaattaactt      4200
     tcgaaataac tccggaaatc gctaatatcc gagaaaaata tgtaatggat ttttacatag      4260
     taggagataa acaattttta tcttgcattg atatctattc aaaatttgca tcattaatag      4320
     aaataaaaag tagagactgg ctagaaacca aacgagctat attacaagtg ttcaaccaaa      4380
     tgggtaaacc catcgaaata aaggcagaca aagactcagc ttttatgtgc acagctttgc      4440
     aattatggct aaaatcagaa gcagtaaata ttaatataac cactagtaaa aatggtatat      4500
     ccgacgtaga acgatttcat aagacagtta acgaaaaact aagaatcatt aacagcgact      4560
     cagacgtcga aaataaactt acaaaatttg aaactatact ctacacgtac aatcataaaa      4620
     caaagcacaa aacgactaac agaacaccag cggacatatt catatatgca ggtacaccag      4680
     agtatgacac acaagctaat aaagaaaaac taataaataa tctcaacaaa aaacgaacaa      4740
     attatgaaat tgacactaga tacaaacact caccgttagt taaatcaaag acgacaaccc      4800
     cgttcaagaa aacaggagaa ctaagacaaa tcgacgacaa acattttgag gaaactaaca      4860
     gaggcaggaa aataacacat tacaaaacca aattcaaaaa gaaaaagaag actaatcaaa      4920
     gcaaatataa caattacagg tcaacaacag acagcgatca aaacatacaa gcaccagctt      4980
     aaattaatta ttataatatt actatcaata actgtaaact atataaatgc acagagtatt      5040
     gaaattaatc ctatcaaagc ccataacgga tatctcatat ttaaaacagg aaccatagac      5100
     attccgacag attacgaatt cccactgttt aacggttaat ataacaaaaa ccgaagaaac      5160
     ttttaacaat ttaattgaac aaagtaaaga attcaataac cttatacaaa tcgaatacct      5220
     agtagaaaaa ttaaacagag aaataaacgg cttaaaaata gccaaacgca acaaaagagg      5280
     tttagttaac atagtaggaa cagcatataa atacttattt ggaacattag atcaagaaga      5340
     caaagcagaa attgaacaaa aaataagcaa cttagcagaa aacagcgttc aggttaacga      5400
     attaaattac ataatagaag ctataaaaca aggggatagg aatcatgaac gaactagatc      5460
     aagagaaaca aaaagggaag aaattagata tccttatatt taacttacaa cactttacag      5520
     aatatataga agacatcgag atgggaatgc agctcacaag attaggaatt tttaacccaa      5580
     aattactaaa acatgactat ttgttgcatg ttaattctga gaaattgttg aatacaaaaa      5640
     cttccacttg gtttaaatca gatacaaacg aaatactgat aatatcccat attcctcgag      5700
     aaataataaa aagcccggta ttcgaaataa ttccataccc ggatgaaaat aataatattt      5760
     tgacagaaat agctcatgaa aaatatttta cccaagataa aaaagtttat agcagagaaa      5820
     caaaaaaatt aattaataat aaatgtttaa caggaatttt aaaccaaata acatcagaat      5880
     gtagttatac taaaattttg caaaattttc aaatcaacta catagaacca aatataattt      5940
     taacttggaa tttaccaaaa actatattaa accataattg tataaataac gaaataacaa      6000
     tagaaggaaa caatataata aaaatcttta attgttcatt gcaaattaat gaaatttcaa      6060
     tttcaaacaa tatgttagat tatacctcaa agcatttacg taggcaatga tgttataaaa      6120
     ttagaaccac tttcgtttgt acaaacgaaa caaattatta tatgcacata caaaatttac      6180
     caatgtattc cagataatta caataaccat atttgtaatc atattaataa gtttaacact      6240
     gtattgacat ataagttcaa aagcatacct aagaaattaa ttataaaata taaaaaaccc      6300
     aaagtagaag aaacacctac aataatagga gatataccaa ttctaaaaga agaaaatgtt      6360
     acactatatc caaacttaaa cacctgagga caggcacttt tctaatggtt gggggagtga      6420
     catatccata gtcgcaccca ccctttaaca taacttagca cataagcata agcacaatta      6480
     taaacatttc taatattgta aacaaagagc ctggtgataa catcgacatt ggtcaagatc      6540
     aaactgtccc cctttggtag acataaacaa ttcaccctaa atatcacgcc actgtggtag      6600
     acataaacaa ttcaccctaa atatcacgcc actgtcaatg ttcccatcag agtactatcc      6660
     cacgcataat tgctgacgca gctcaaactt cactcaattt tgactcaaac tctctcaaag      6720
     cgaagtttgc taagcgaccg caacagttag ataaatcagt tcatattcgg gaagcaaatc      6780
     tgaatgtact caacaaaagt agccgttaag tgaaaataat aaattgaaat atattttttt      6840
     atagtaacct aacgtgtaaa acttaatt                                         6868
//
ID   AF009439   standard; DNA; INV; 2485 BP.
XX
AC   AF009439;
XX
DR   FLYBASE; FBgn0020675; Dvir\Tel.
XX
FT   source          AF009439:573..3057
FT   SO_feature      five_prime_LTR ; SO:0000425:1..431
FT   SO_feature      CDS ; SO:0000316:720..>2485
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044144; Dvir\Tel\Tel1"
FT                   /db_xref="SPTREMBL:O16111"
FT                   /protein_id="AAB66824.1"
FT                   /translation="MFDEGASANGNDEATSASQVAVGTQAAVFKIKIKNLTDRLNRLSS
FT                   ELDPARLRDVDDYELQDYISMASDLQAKFEIVCDGLLEVDHASVDEDLQTSFESTIRQL
FT                   RLSLQRERGNRSKVQQIPHCSTFNSAAADDSRSTFVVPNHSRLPQLKLPEFSGGYTEWA
FT                   DFSNLFTTVIDKDPYLTNIEKLQHLRSCLKGTALDTIRSLEISNANYAAALELLDKRFN
FT                   NKRLIFQAHISEILGLRKVDKGATAQLREFSDKLNSHLRALKSMGSVEQIAGCVIVHTL
FT                   LQKLDSVTQASWEDDAPLDVIPSCERFTTFIERRCQRLENADHATAMYTPSSQVGQNNS
FT                   SRRTFVVTRNGTSACVFCEVAGHSIYKCLQFANLSPLLRLHEAKRLALCLNCLQRGHQL
FT                   RVCGSSACRVCGSKHHSLLHLGNTSSHIAASSPNNAQDTETYSSSQNTLAALLSSPLTT
FT                   AQHLKHDVVLLATAVINVKNRAGSLVPCRALLDSGSQLHIITSRLAHQLQLRKFKSTAI
FT                   VSGIGDAAFASDGFSVNINVKSRVSEYSTCIPALIAPSITDNQPGFTLDPASWNIPSNI
FT                   QLADPEFEYQAY"
XX
CC   Derived from AF009439 (Rel. 66, Last updated, Version 3).
CC   Michael Ashburner, 18-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 2485 BP; 632 A; 599 C; 556 G; 698 T; 0 other;
     TGTTTGGTCA AGTAACAGCA GAGATAACAC CGACGGCTGC GGACATCATC CAACAGCAGA        60
     AAATAACAAT CATAATTACA GCCTAAGAGC AAATAGTTTT TTTTGCGCGC TCTTTGTAAG       120
     CTGCTGTCCA CTCTCCTTCT GAATTGCTTT GCTTGCATTG CTGCCCTTCG CTCTAACCGG       180
     CGAGCGTCTT ATTGGAGTTT CGTTTCGATT CGCTTTACAT ATTGTTATAA CCAGTCAGTC       240
     TTTCGTTTTG ATCGCAACCT AGGCACAACT AATTCGAGTT GGCTGCCAAG CAACAATTTA       300
     AAACTTATAA ATTCTAATAA GTGCCCTGCG CGGCAAATAA ATCCATTTGA AAACTAATCT       360
     AAGTGTTTGA ATTTCGCTGC ACAAGCAGTT AGAATTAATT GGTTGCAAAA AAGCTTGCAA       420
     CTACACATTT TGGTGACCCC GACGTGATTT TTTCTTTCTT TCATTTTTTC TATTTTTTTT       480
     CTTGTACTTC GTTCTTGTCG TGTCAACGGA CAGTTATCAG TTCGGGCAAA GCTGTGTGGT       540
     GAGCCGTTTG CTTGCGCATC TGCATACAGT TGGTTGTTAT ACATAAACGC CGTAGCAAAT       600
     CCCCGCTAAT CGTTGCGCGC TATAACCCGC TATACGCTAT CTCGCTCGAA CGAACACTTG       660
     CGCGATCAGA CTTGTATTGT AGTTCGGCTG TGTGAACCTT GTTGTGCGCT ACATTCATAA       720
     TGTTTGATGA AGGTGCAAGT GCAAATGGAA ATGATGAGGC GACATCAGCT AGTCAAGTGG       780
     CGGTTGGAAC CCAGGCTGCT GTTTTTAAAA TAAAGATCAA GAATTTAACT GATCGACTCA       840
     ATAGATTGTC CTCGGAACTT GATCCCGCTC GACTTCGCGA TGTTGATGAC TACGAGCTGC       900
     AAGATTACAT AAGCATGGCA TCTGACTTGC AGGCGAAATT TGAGATAGTC TGTGATGGTT       960
     TGTTGGAGGT GGATCATGCC AGCGTTGATG AGGATCTTCA GACAAGTTTT GAGTCAACTA      1020
     TTAGGCAGCT ACGGCTGTCC CTTCAACGCG AGCGCGGAAA TCGAAGCAAG GTTCAGCAGA      1080
     TTCCGCATTG TTCCACCTTC AATTCAGCCG CAGCCGATGA CTCGCGTTCT ACCTTTGTTG      1140
     TTCCAAACCA CTCTCGATTG CCTCAACTTA AATTGCCGGA GTTTAGTGGA GGCTACACAG      1200
     AATGGGCCGA TTTCTCGAAC CTGTTCACCA CGGTCATTGA CAAGGATCCG TATTTGACCA      1260
     ACATTGAAAA ACTCCAGCAT CTACGGTCAT GCCTTAAAGG AACAGCGCTG GATACAATTC      1320
     GCTCATTGGA AATTTCAAAC GCAAATTATG CTGCCGCTTT AGAACTGCTT GATAAGCGTT      1380
     TTAATAACAA GCGTCTTATT TTTCAGGCAC ACATCTCTGA AATTTTGGGT TTGAGAAAGG      1440
     TGGACAAGGG CGCGACTGCA CAGCTGCGCG AATTTTCAGA TAAGCTCAAC TCTCATCTAC      1500
     GTGCTTTAAA ATCGATGGGC AGTGTGGAAC AGATCGCCGG TTGCGTCATA GTACATACGT      1560
     TGCTGCAAAA ACTAGATAGC GTTACGCAGG CTAGCTGGGA GGATGATGCG CCGTTGGACG      1620
     TCATACCATC ATGCGAGCGG TTTACAACCT TCATAGAGAG GCGTTGCCAA AGGCTGGAAA      1680
     ATGCGGATCA CGCTACGGCA ATGTACACGC CTAGCTCCCA GGTGGGCCAG AACAACAGTA      1740
     GTAGAAGAAC GTTTGTAGTG ACTAGGAATG GAACGAGTGC TTGTGTGTTT TGTGAAGTCG      1800
     CAGGCCACTC TATTTATAAA TGTTTGCAAT TCGCAAATTT ATCGCCCTTG CTGCGCCTTC      1860
     ACGAAGCCAA GCGGCTTGCG CTGTGCCTAA ACTGCCTGCA AAGGGGACAT CAGCTGAGAG      1920
     TCTGCGGCTC CAGCGCTTGC AGAGTTTGTG GAAGCAAACA TCATAGCTTG TTGCATCTTG      1980
     GCAACACAAG CAGTCACATC GCTGCTTCTA GCCCAAACAA TGCTCAAGAT ACCGAAACTT      2040
     ATTCGTCATC CCAAAACACC TTGGCGGCAC TTTTATCTTC GCCTCTCACT ACCGCCCAGC      2100
     ATCTCAAGCA CGATGTGGTC CTGCTTGCCA CTGCCGTCAT CAACGTGAAA AATCGCGCTG      2160
     GCTCCTTGGT GCCTTGCCGT GCGTTGCTCG ACTCTGGGTC GCAGTTGCAC ATCATCACCT      2220
     CTCGTCTTGC TCATCAGCTC CAGCTGCGCA AATTCAAGTC AACAGCAATC GTCTCTGGCA      2280
     TTGGTGATGC AGCATTTGCG TCCGATGGGT TTTCGGTCAA CATCAATGTC AAATCTCGAG      2340
     TGTCGGAGTA CTCCACATGC ATCCCGGCCT TGATTGCACC ATCCATCACC GATAATCAGC      2400
     CTGGCTTCAC TCTTGACCCT GCATCATGGA ACATTCCATC AAATATACAA CTAGCTGATC      2460
     CTGAATTCGA ATATCAAGCT TATCA                                            2485
//
ID   DMTRAM     standard; DNA; INV; 3452 BP.
XX
AC   Y08905;
XX
DR   FLYBASE; FBgn0005772; Dmir\TRAM.
XX
FT   source          Y08905:1..3452
FT   SO_feature      five_prime_LTR ; SO:0000425:1..372
FT   SO_feature      three_prime_LTR ; SO:0000426:3080..3452
XX
CC   Derived from Y08905 (Rel. 51, Last updated, Version 3).
CC   Michael Ashburner, 18-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 3452 BP; 883 A; 867 C; 793 G; 909 T; 0 other;
     tgttcggagc agaacccagc cgattagctg cttgccaaat agcacctaat tcttggccct        60
     cagccgctta ttttgtttgt tacttatgtc tatgtcactc atttgtttgt taaagctttg       120
     cgcttgcttg ccctgctaaa cgctctctgc cagctcgctc ttcgctatct ccgctttgcg       180
     tctgcctacc gacgtcggcc gagcgaagct gcgcttagcg atcggagcgg caatgtaaag       240
     ggcaggcaag ccacacttgc aatttggatg tcacgcatta aagaacatat cgtaatttta       300
     tttctgcgcc gagttttgtt taattcgaaa taattagtcg gccgattggg gataaaaaac       360
     attatctcca cataaaattt ggtgaccccg acgtgatctc tgagttgcag tgtcaattaa       420
     taatcattcg cgatcgacat tcgttagccc tagcaaattt tcgtcggtta agcacaattc       480
     ggtgctaaaa cacacttaca tacacctaca tacacgcatt gctggctatt aatttctctg       540
     tcgcacaatt cggtcagtgc agtgcggtag gcagtgcagc gaactcacta atacacacaa       600
     gcggagtaca aagcggaatc ggacagctcg cacagccgca cagctaaagg cattagctgt       660
     aatccctttg ctttcggttc ccacgtttat acgtatacag ggtgtctttt tcggtcgtgc       720
     tgagagactc ttttaaaacc tcaacatggc agcacctgag cctaccaatg tcgcgaacgc       780
     agcaatgccg agtgatgtag atttctacaa gcacaaggcc gagtccatcg cgcgccaact       840
     aaaggccatg gatcgctttc ttaccaagga agagcttgcc cgagttagat gaggcagaac       900
     ttcaagctcg cttagagcaa atcgagcgaa tgaatgcgga tttcgatgcc gctcaaacga       960
     gccttgaaag gctggatttc ctgcagttag cccatgatgc ccggctggac ttttcgaatg      1020
     tttatgtcaa ggttaggtcc aggctgtcgc gggagttgat ggctgctcgc acggtaaatg      1080
     ttgccaattg aacggctcgg catactctcg aggggaattc gtcgttgttc gcctataata      1140
     gtataggccg ttctcgaatg cccgagttgc agcttccgcg attcggtggg aactacatgg      1200
     attggccaga attccactcg atgttctcga caatggtgca caaagaccat cgtataccaa      1260
     tcatcgaaaa attccaatat cttcgtggat gtctagatgg tgctgcgctg gatacgattc      1320
     gttccttgga actttctgag gagaattacg acaaggcgtt gaatttacta atgttgcgat      1380
     tcgataataa actgttacat tttcaggcac acgtcaaggc tattttcggg ctgcaagggg      1440
     tggagaaggg ctcggctatc ggcttgcgcg cgctcaggca caaaatcaat tcgcacttgc      1500
     gggcacttca gaccttggcg accccgcagg agatatccga tgggttgctg atcttcatca      1560
     taggcacgaa actggaccac aaaacaaagg agaaatggga tgagaacttg ccgacgtcag      1620
     gattgcctcg gtggtcaagc atggcctcat ttctggaagc gagatgtcgg atgctggaga      1680
     atttgggatc agccatggca acaagtccta gtcaacaggt gggagaagac aaacctgtca      1740
     cccttatcac ctccagtaac gaccatccta accccatatg taaccattgc aattcctccg      1800
     agcattacat atctagatgt caggcattcc tgaatctctc tgcgtttgaa cgacacaaag      1860
     aagcaaagaa gagccgcttg tgtttgaact gcctcaacaa aggccatgaa ttgcagaggt      1920
     gcaggtcagg actttgcagg cattgccagg ccaaacatca cacgctactc cacattccat      1980
     cgggaactgg tgcttcatct tcctcttcac cggccgagga atcgatccag caagaggccg      2040
     cgactgtgct tctagcaagc gggtgttcca gccctccccc ctcgatacag aaatctcagc      2100
     ctagccagaa cgtgttgcta cctactgccc tcgtccatgt aacagatcgt tatggagcac      2160
     ttatctcatg tcgtgccatt ttggattctg catcacaggc aaactttgta acatctagac      2220
     ttgctgatca gttgcagttg gatcatcgct cgtcttatgt tcacatctct ggaatcggag      2280
     attccattct accttcgagc aagtctgtac atatagttgt acaatcccag gacgcaagct      2340
     atcgagcttc cttcgctgca attgtcacca actcaattac ggaaatgcag cctaacttcg      2400
     gcctagacgc aaaggattgg ccaatgccga ataatctaaa actagctgat cctaatttct      2460
     ccaagcccca acgtatcgat ctgttgatag gttctggttt gttcttcgat ttaatgtgcg      2520
     tcggacagat tcgactatca gcccaattgc caacattgca ggagacaaaa cttggttgga      2580
     tagtatcagg aagcattgat agctcggaga ataagcgtgc agctttagcc gcttttgaaa      2640
     attcctcgtg catctctatt gacgattttc gacccacaac gctggagtac caaaacttag      2700
     agcagcaatg caggaagcag ctgctcgagt gccaggtgca agtggaaaaa ctgcgatcgg      2760
     agaatcagga actgcagcgc gaacttttcc atatattaaa aacctacata tccacgctaa      2820
     atgaaattca actttcaaca atttctacat tgccaaattt cctgccattc tatacaaata      2880
     cagaggttcc cgatgatcaa gacgtaatca cgacaagccg ccttcgtaaa gaagcgccga      2940
     tttctcgctt cgacgatcat tccagcgtag ccgccagctg cgcccaagca agcatcttca      3000
     agagggccgt tggaaaatta gcggttctgc cccttcagga tggatctgtt gaaagccttt      3060
     gccttccaac ggggggtgaa tgttcggagc agaacctagc cgattagctg cttgccaaat      3120
     agcacctaat tcttggccct cagccgctta ttttgtttgt tacttatgtc tatgtcactc      3180
     atttgtttgt taaagctttg cgctttcttg ccctgctaaa cgctctctgc cagctcgctc      3240
     ttcgctatct ccgctttgcg tctgcctacc gacgtcggcc gagcgaagct gcgcttagcg      3300
     atcggagcgg caatgtaaag ggcaggcaag ccacacttgc aatttggatg tcacgcatta      3360
     aagaacatat cgtaatttta tttctgcgcc gagttttgtt taattcgaaa taattagtcg      3420
     gccgattggg gataaaaaac attatctcca ca                                    3452
//
ID   DMTRIM     standard; DNA; INV; 3111 BP.
XX
AC   X59239;
XX
DR   FLYBASE; FBgn0004642; Dmir\TRIM.
XX
FT   source          X59239:1..3111
FT   SO_feature      five_prime_LTR ; SO:0000425:1..792
FT   SO_feature      three_prime_LTR ; SO:0000426:3062..3111
FT   SO_feature      polyA_signal_sequence ; SO:0000551:308..313
FT   SO_feature      TATA_box ; SO:0000174:740..745
FT   SO_feature      primer_binding_site ; SO:0005850:795..811
FT   SO_feature      CDS ; SO:0000316:768..1286
FT                   /db_xref="FLYBASE:FBgn0063547; Dmir\TRIM\ORF0"
FT                   /protein_id="CAA41923.1"
FT                   /translation="FTRESSPDTWLQTKVVFIPKAGKPSHTAPKDFRPISLSSFLLKAM
FT                   ELLLGLHLTACIPSSLISDSQHAYRKGRSTETALHSITSIIEASLNFKEYTLVAFLDIK
FT                   GAFNNILPTAITGALTDLGVDSRTVSLIDQMLQCRTVEASLGTLTCTRFVSRGTPQGES
FT                   SRPSYGTWQ"
FT   SO_feature      CDS ; SO:0000316:1193..1444
FT                   /db_xref="FLYBASE:FBgn0063546; Dmir\TRIM\ORF1"
FT                   /protein_id="CAA41924.1"
FT                   /translation="GITGDANVYQICQQRHTAGRVLSPLLWNVAVNTLLREIEGGGCRV
FT                   VAYADDVAIAFSGKFPQTLCECITSTLTKMSNGQTNAG"
FT   SO_feature      CDS ; SO:0000316:1390..2955
FT                   /db_xref="FLYBASE:FBgn0063545; Dmir\TRIM\ORF2"
FT                   /protein_id="CAA41925.1"
FT                   /translation="VHYKYSHENVEWADKCGLGVNPSKTELVLFTRKYKVPVLIPPRLC
FT                   GETLVFSNNAKYLGLILDRKLDWKLSIEDRVKKATVALYTCRKAIGLKWGMTPYIVRWL
FT                   YTAIIRPIMLYGVVVWWPALDRRTCLNKLSRVQRMAELCITGGLRTTPGEALDTVLDLL
FT                   PVDLMGKKVATLAALRMREARLWKASAVGHSGILMRLPQLPERTDYCIPSDHLSTPFQV
FT                   SIPSREDWEMGEPGPANAVHFYTDGSKLDGRVGGGVYCSELEISHCFRLPDHCSVFQAE
FT                   IEAIKEAISIVSKLRLDTHLVCVFSDSQAAIKALGSISSNSATVKDCRRSLHEIAEQLD
FT                   LFLIWVPGHRDIEGNDAADELARQGTTIPLLSEREQVAMPLATCRLLTHELFEQNANRR
FT                   WQQTVSCKVSRLICSYRSKKRSAELYRLSRAQCFAVTRAITGHWQIGTHASRLSIPHND
FT                   FCRSCRDEEEEESVLHFFCHCPALGNRRLRILGAAFLADISGLSEIKPGTLSKYIQATG
FT                   WDCP"
FT   SO_feature      CDS ; SO:0000316:2624..3103
FT                   /db_xref="FLYBASE:FBgn0063544; Dmir\TRIM\ORF3"
FT                   /protein_id="CAA41926.1"
FT                   /translation="YAHIDRRSAQQSCTDSAEHSVLQLLEPLRDTGRSALMPPDCQSLI
FT                   TTSAGVVATRRRRNRSSTSSAIAQPLEIVVFVFSGPLSLRTFRACPKSNQGPCPNTSKP
FT                   PDGTALNPAVVCSHGSGNEKGHMPMRQHNGPSIGPSELGGGRLLSPPSAYRLNLT"
FT   SO_feature      RR_tract ; SO:0000435:3050..3059
XX
CC   Derived from X59239 (Rel. 35, Last updated, Version 3).
CC   Michael Ashburner, 18-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 3126 BP; 799 A; 873 C; 789 G; 665 T; 0 other;
     attctcggac cacaggtacg tggaaactgt cttctccttc tcagtaccga agccagtccg        60
     attccggaac atcaggcgga caaactggac tcggtactct gattacctct gtcgtgttct       120
     ccctgagccc ccatctgagg aggagttctc cacggaggcc acgactcgtc ttcttaagat       180
     ctttaccgac gcctgcaata aggcgctcga caaagcatgc ctctctggca agaacagagg       240
     ccggaggaaa cctgaatggt ggaatccgaa actgggtgaa ctccggaaag cctcccggag       300
     actcttcaat aaagctaagg ctgaaaacgt tgagcaaaac tgggccgaat acaaggccag       360
     tctgtcaacc tacaacaaag aacttagaaa agctaaacgc gcctcctggc gtaagttctg       420
     cagcgaaatc gagagtaact cagaagcctc acgcttgcgc agagttctct cgaagacaac       480
     acccaccctg ggctacttga agaacaccga ccagtcgtgg actacgtcca gcgaggagtc       540
     gctaaatctt ctcctaaata cccacttccc tggctgcgat gaaaacagac ccaactacct       600
     cgcgcctcct tctgtcgcct caaatgccat cctgagactg ctaagccagg agaacatttc       660
     ctgggcgatc agaagcttta aaccctacaa gtccgcgggg ccagacggca tttttcctgc       720
     ccaactgatt cacgcgggat ataaagccat taactggctc aaaataattt acgagggaat       780
     cttctcctga cacctggctt cagaccaaag tcgtattcat acccaaggca ggcaagccct       840
     cgcacactgc cccaaaagat ttcagaccca taagtctatc gtcttttctt ctaaaggcga       900
     tggagctgct cctggggctg catctaacgg cgtgcattcc gtccagtctg atctcagact       960
     cccagcatgc ctatcggaag ggaagatcca ccgaaacggc cctacactca atcacatcga      1020
     tcatcgaagc gtcccttaat tttaaggagt acaccctagt agccttcctc gacattaaag      1080
     gcgcctttaa caacatcctt ccgaccgcca tcacgggcgc actgacggat ctgggcgttg      1140
     actccaggac ggtgagcctg atcgatcaga tgctacaatg caggacggtt gaggcatcac      1200
     tggggacgct aacgtgtacc agatttgtca gcagaggcac accgcagggc gagtcctctc      1260
     gcccctccta tggaacgtgg cagtgaacac actgctgcgg gagatagagg ggggtggctg      1320
     ccgtgtggtg gcgtacgcgg acgatgttgc catagcattc tccggaaaat ttccgcagac      1380
     gttgtgtgag tgcattacaa gtactctcac gaaaatgtcg aatgggcaga caaatgcggg      1440
     ttaggcgtca acccgtctaa aacggaactg gtgcttttca ctaggaagta caaagttccg      1500
     gtactgattc cgccaagact atgtggggaa acgctagtct tcagcaacaa cgccaagtat      1560
     cttggcctaa tcctcgatag aaagctcgat tggaaattga gcatagagga tagagtaaag      1620
     aaggccacag tggccctcta tacttgcagg aaagccatcg gactaaaatg gggaatgacc      1680
     ccctatatag ttcggtggct ctacaccgcc atcatacgac caatcatgct ctatggagtg      1740
     gtggtatggt ggccagcctt ggacagaagg acatgcctca ataaactcag cagagttcaa      1800
     cgcatggcag agctatgcat aactggcggg ctacgcacta ctccagggga agccctggat      1860
     actgtgctgg acctcctgcc tgtggatctc atgggaaaga aggtggcaac acttgccgcc      1920
     ctcagaatga gagaagccag actgtggaaa gcatccgcgg ttgggcactc gggaatcctg      1980
     atgagactcc cgcaattacc agagaggaca gattactgta tccccagtga tcacctctcg      2040
     acgcccttcc aggtatcaat cccatctagg gaggactggg agatgggcga accaggacct      2100
     gcaaatgcgg tccacttcta cactgatggc tcaaagctag acggccgcgt gggaggcgga      2160
     gtctactgca gcgagctgga aatcagtcat tgcttcaggc tcccggacca ctgtagtgtg      2220
     ttccaagcgg agattgaagc catcaaggag gccatttcta tagtctccaa actacgtcta      2280
     gacacgcact tagtgtgcgt tttctcggac agccaagcgg ctattaaagc tctaggctca      2340
     atatcgtcga actcagcgac tgttaaagac tgccgcagat ctctgcacga gatcgcagag      2400
     cagttggatc tcttccttat atgggtcccc ggccacaggg acatcgaggg gaacgacgcc      2460
     gccgacgagc tagccaggca gggtactacg atccctctcc tatcggagag ggagcaggta      2520
     gcgatgccct tagctacgtg caggctccta acgcacgaat tgttcgagca aaatgccaat      2580
     agaagatggc agcaaaccgt ctcctgtaaa gtctcaagat tgatatgctc atatcgatcg      2640
     aagaagcgct cagcagagct gtacagactc agcagagcac agtgttttgc agttactcga      2700
     gccattacgg gacactggca gatcggcact catgcctcca gactgtcaat ccctcataac      2760
     gacttctgca ggagttgtcg cgacgaggag gaggaggaat cggtcctcca cttcttctgc      2820
     cattgcccag cccttggaaa tcgtcgtctt cgtattctcg gggccgcttt ccttgcggac      2880
     atttcgggcc tgtccgaaat caaaccaggg accttgtcca aatacatcca agccaccgga      2940
     tgggactgcc cttaatcctg cagtagtctg ctctcacggt tcaggcaacg agaaggggca      3000
     catgcccatg cggcaacaca acggaccttc tataggtcca agtgagcttg ggggcgggag      3060
     gctcttatcc cccccctcgg cctaccgcct taacctaacc taacctagtc c               3111
//
ID   TV1    standard; DNA; INV; 1728 BP.
XX
AC   Z49253;
XX
DR   FLYBASE; FBgn0015678; Dvir\Paris.
XX
FT   source          Z49253:1..1730
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..242
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1489..1730
FT   SO_feature      CDS ; SO:0000316:394..1440
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /protein_id="CAA89219.1"
FT                   /db_xref="FLYBASE:FBgn0044149; Dvir\Paris\T"
FT                   /db_xref="TrEMBL:Q27281"
FT                   /translation="MPGQRINENVIQLVYFHYHKGKCAKELAEMFSIKLRTIYNIINR
FT                   AEKENRLELKHSGGRPAKLSRRDHSKILKQINENPQTSLRQLALDLKNDCNKTVSHET
FT                   VRKVLKMHKYSSQIARKKPLLSAVNIQRRLNFSITNVNKPAEYWDDVIFCDETKIMLY
FT                   YHDGPSKVWRKPNTALEQKNIIPTVKFGKLSVMVWGCISSKGVGELRIFNDVMTKEFY
FT                   LDILKNELSRSAIKFGFVDPQNPSKQRYKLYQDNDPKHKSFLCRTWLLYNCSKVIDTP
FT                   AQSPDLNPIENLWAFLKKRVGKRSPTNKNALIKAIQEEWIKIPEIYDLHNLIQSMSRR
FT                   LRAVMDANGQYTKY"
XX
CC   Derived from Z49253.
CC   Michael Ashburner, 18-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 1730 BP; 607 A; 312 C; 313 G; 498 T; 0 other;
     CAGTTTGTCA AGTAATTGTT TGCAAAGTGA AAAACAGCAC ACAAATTCAT TTTTAGGCTT        60
     ATATTTTACC GAATTAAACT ATTTCTTCTT CATTTTTTTT GCATATAATT ATTATTCTAA       120
     GTATTCTTAA TAGATATAAG GCACAAACAT AACAAAATTC AAAGCGCAAA TGTAAAAAAA       180
     ACAGTCAAAA CTAAAATTAG GCAAATATTG CGCTGTCAAT TAATTCTTTG CAAAATGCAA       240
     ACACAATTCG AAATAGAGCC CAAGCTACCT AACGGTACTT CAAATTCGAA GAAATTTGAA       300
     TGCATGAGTC ATTGGTATGC AGTGTGCGAA TGCCTTCTAA ACGATTTTGC GATTTTAACA       360
     GTTCACATCT TGCCTAATTG AGAGCTTCTT ACAATGCCTG GCCAACGAAT TAATGAAAAC       420
     GTTATTCAAT TAGTTTATTT CCACTACCAC AAAGGAAAAT GTGCTAAGGA ATTGGCGGAA       480
     ATGTTCTCAA TTAAGCTAAG AACTATTTAT AATATTATTA ACCGCGCCGA AAAAGAAAAC       540
     AGATTGGAAT TAAAGCACTC CGGAGGCAGG CCAGCAAAGC TCAGTAGACG CGATCATTCA       600
     AAAATTTTAA AACAGATTAA TGAAAATCCT CAAACTAGCC TCAGACAGTT AGCATTGGAC       660
     TTGAAAAATG ACTGCAATAA GACAGTGAGC CACGAGACAG TTCGTAAAGT TTTAAAAATG       720
     CATAAATACT CCTCGCAAAT AGCTAGAAAG AAGCCACTAC TATCTGCAGT AAATATTCAG       780
     AGGCGGCTTA ATTTCTCTAT TACGAATGTC AACAAGCCCG CGGAGTACTG GGATGACGTT       840
     ATTTTTTGCG ACGAGACTAA AATAATGTTA TACTATCATG ACGGACCCAG CAAAGTTTGG       900
     AGAAAGCCCA ACACAGCTCT GGAACAAAAG AATATAATAC CAACAGTAAA GTTTGGCAAG       960
     CTGTCTGTAA TGGTGTGGGG CTGCATATCG TCGAAAGGTG TTGGTGAGCT GCGCATTTTC      1020
     AACGATGTGA TGACGAAGGA ATTTTACTTG GACATTCTGA AGAATGAATT GTCAAGGAGC      1080
     GCAATAAAGT TTGGCTTCGT AGACCCCCAA AACCCCAGTA AACAGAGGTA CAAGCTTTAT      1140
     CAGGACAACG ACCCCAAGCA CAAATCGTTT TTGTGCAGGA CTTGGCTGCT GTATAATTGC      1200
     AGCAAAGTCA TTGACACCCC TGCCCAGAGT CCTGACTTAA ACCCGATTGA AAATTTGTGG      1260
     GCTTTCCTAA AGAAGCGCGT CGGGAAACGG AGCCCAACTA ACAAAAACGC TCTCATCAAG      1320
     GCCATTCAAG AAGAATGGAT AAAAATACCC GAAATATATG ACCTGCATAA CCTTATTCAG      1380
     TCAATGTCTC GTCGTCTACG GGCTGTAATG GATGCTAATG GCCAATATAC CAAATATTAG      1440
     TACCACAATA GCTATAATTT CCTAGATTTA GTTATGTATA CAGTACTAGT TTGCATTTTG      1500
     CAAAGAATTA ATTGACAGCG CAATATTTGC CTAATTTTAG TTTTGACTGT TTTTTTTACA      1560
     TTTGCGCTTT GAATTTTGTT ATGTTTGTGC CTTATATCTA TTAAGAATAC TTAGAATAAT      1620
     AATTATATGC AAAAAAAATG AAGAAGAAAT AGTTTAATTC GGTAAAATAT AAGCCTAAAA      1680
     ATGAATTTGT GTGCTGTTTT TCACTTTGCA AACAATTACT TGACAAACTG                 1730
//
ID   SPOCK    standard; DNA; INV; 4952 BP.
XX
AC   AY144571;
XX
DR   FLYBASE; FBgn0015678; Dmir\spock.
XX
FT   source          AY144571:1..4952
XX
CC   Derived from AY144571.
CC   Michael Ashburner, 18-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 4952 BP; 1554 A; 1113 C; 1113 G; 1172 T; 0 other;
     CAAAAAACGT TGTTCAACAC TGGTATGGCG CGTACCTAAA ATTGTTTGCG GAAGGAAAAA        60
     ATTAACATAT TTCAAGACGT TCGCTGATAG TTTTAATCAA AAAGACTTTT TCCGAAGCTT       120
     CTGGGGGTGC CTCACACGCC TACGAAGACG GCGCGAAGAA ATTCCCAAAG CTTAATCAAT       180
     TAAGTCGAAA AACCTGGAAT TTACTGCATG GCGTCCCGGA ATAACTCTTA AAACGGCTCT       240
     TGGAACTCCG TCTGGACCCT GAGAAGCATG GCAAGCATAG GAAAGACAAG GATGGCCACG       300
     GAGAAGGCGA CGGGAGTTAA AATTTGCATG GAAACGCTGA AAAAAAGGGA AGGAGAAGCT       360
     AAATCCGCCA TGCGGGTAGG AGTAAAGATG GCGGCAAAAA CGGCTCCGCA GCTTTTGGCT       420
     TCTAAACTGC TGTGCAAGAA ACCAAACTTG TCGACGAACG TGTCGACAAA CATGTCCACG       480
     AACACGACAA CAAGCATGAC ATCAAACATT TCTACGACGA AAGAGAGAGA GAAGACTGAC       540
     GCGGTTTGGT GGCTTCCGTG AGTACGAAAA ACGGAAGTAA CCGCAAAATC ATCGTTAACA       600
     AGTATTATGA GGGGCATAAA GGCCCATACA TTGTTTGTAT CGACAAAATG AGTGCGAATA       660
     ATGCCAGAAT TGCTATAAAC CAGTTTGATC TATCCGATCT GCTGCTGAAA CAGGGCATTA       720
     GCGATATCGA GGAGGTTGCT AGAATGGGCT ATGGCAGGTG CAAGATTGTG TGCGGGTCGG       780
     CGGGAATATG CAAACGGGCT AGTGGAAAAG AGTGTTTTCG CTGCTCAAGG GTACTCAACC       840
     CGAATCTTTA GGCACTTCGT CCAAAAAGCA GGGTTAATTT TTGGGTTCCC CGTGCACTAC       900
     TCGGAGGAAC AGCTAGCGGA GCTTGTAACC TCGGATATCC CAATTGAGGA GATAGTTCGG       960
     ATTACGCGAA GGGATAGAGC ATCGGGGGAA CGTGTACCTA CTGGCAGGGT GAAACTCTGG      1020
     TTCAGAGGAG AGCAGTTACC AACCAAAATC AATTTTCTAT ATTCTAAAGT AGAAGTGAAA      1080
     CCTTTTGTTC AGCTTATTCA ATGTTTCAGG TGTTTTAGGT TTGGCCATCT GGCGCAACAT      1140
     TGCAAGAGTG GAGCGAAATG TTTCAAATGC GGACAAGATC GCAGCAAAGA TATTATCTGC      1200
     TCAGGGCTGG TCTGTGCTAA CTGCAAGGGG GAACATGCTG CCACCCACCC GCAGTGTGAG      1260
     GCCAGGAAAA AAGCGTACGC CATTCAAAAG TGTATGACAC TGGAAAACCT AACTAGAGCT      1320
     GAGGTCAAGG CTAGATATCC GATCCTTTTT GATAGAACTT CCCCCAACCT AAGGGATCAA      1380
     GGGGAATTTC CTAGACCCAG TTGGCAATCT AACCGCTCTT AGAGTCCGCC AGGGAAATTC      1440
     ATTCTGTCAC CTCTTTCGCG GAAGTGACCA AATCCAATAG GGTTGCCGCC CGGAACGCAG      1500
     AGGCGGCCAA GGCAGCAGCC AACATGGCAG AGTGGAAGAA CTCAATAAAC TCAGACTGCG      1560
     TCCAAATGAG CGAGAAATTT GTTAGATCTT CATCCGTGGC ATCTTCTCTG GCCCAGGATA      1620
     AGCTAAACGC ACTAGGAGCC AAACTCACAG CGTTCCTGAT TGATCCAAAC AACATCATTA      1680
     AAGGGGATTC TTTAGCAAAT AAATTTATTA AGGAAATTAG AGAATTTGTC AATGCTTCCA      1740
     ACGCAGAACT AGATAGGCGT CAGATTGCCC AAGGGATGGC AGTTGGTTCT CAAAACATCC      1800
     AACAATGAAG ATTCTTCAGC TAAATATTCA AAGTCTGACA CACAACAACA ACAAACAGCT      1860
     ACTCTCAATG TTCCTAGACC AGAACGCAAT AGATATTGCC ATCCTCTCAG AGATTTGGGT      1920
     GTTGAACAAC GCGGACTGCA GCATTTTAGA CTATAACTTT TTCTGCATGC CCAGAGAGGA      1980
     CGGCTACGGC GGGGTTGGCA TCTACGTCAG GAAAAACATT CAATTCAGCA TTTTAAAAAT      2040
     AGAGAACGAC TTGGAAATTT TAGGAATAAA AACATTAAAC CTCAAGAGCA ATTTCAATAT      2100
     TTTTAGCATA TATGCACCGC CATCAACAAC AGTTTCACAG TTTAAATCGG GCACAAAAAA      2160
     GTTTTTGGAA TTCGCGGCTT CGCTTGACAT ACCCTCAATA GTGGGCGGGG ACTTCAACGC      2220
     TAGGTCTTCT ATCTGGGGAA GTCCGATCTG TGATCGCAAT GGTCGCAGCA TTGAGAATTC      2280
     CACCCGGGAG GCCGGATTTA TCTGCCTAAA CGACGGTTCG CCAACCTTCT CCAGGAGCCC      2340
     ATCTCAATTC TCCGTTCTTG ACCTTTCTTT TTCGAACTAC AGAAATGGAA CTATTAACTG      2400
     GCAAGTCCTC AAAACAAAAA TTACGAACAG CAACCACTTC CCAATTGTAT TATCAGTGCA      2460
     AGGCCTAAAT GCCCCCCTCC AAGGCAAGAA GATCCTTCAC AACAGAATAG CCCGGATTCT      2520
     GGGTGCAAGT GATTTCTCAA ATCTGGAGGA GCTCAATGAA AAAGTGAAAT CCCTGACCTT      2580
     AAAAAACACG GTCACATTCC CACGCAAGAA CAAGTACGTT GCTAAGAAAT GGTGGAACGA      2640
     GGAAACGGAA AAACTTTTTC GCGTGAGAAA CGCTTGCAGG CAAAAATTCT ACCTCACCAA      2700
     AAAATTGGCT GATGCCAGAG CAACCTTAGA AGCTGACAAA AATCTACAAA ATCACGTAAA      2760
     AAATCTTCGA AAGCGCAACT TTTCCAAGTT TATAGAAGAG GTCTCCTCAT CTCCCTCTAT      2820
     GTGGAGCAGG GTGAAGAACA TCAAAAAATA CGGTCAAATC AAAAATGTAG GGAACAAATG      2880
     GACGAACGAA GATGACAAAA ACTTTCTCAA TATGGTTAAA GTAACCCCAT CCACGTCAAA      2940
     CAGTAGGCCC CCTAAGAAAA TTCCTGCCCC TTTGTAAGGA CCAGACGACC CGGAACCCCT      3000
     GGAACTGGAA GAATTCCTGG CCTTCCTAAA AACCAGGAAC CCCAATTCGG CTAGAGGCCC      3060
     TGATGGCATC TCGTTCAGGA TGCTTCAAAA GCTACCAAGT GGGAAAAACA AGACATTTTT      3120
     GAAATTATAA ATAAAGTATG GCTGAGTGGC GTCATCCCTG AAGTCTGGCG CAGGATAAAA      3180
     GTGGTACCCA TCCCCAAGAA GAATGCAGAC CCTACTTCCT TCCAAAACCA TAGGCCGATT      3240
     TGTTTGATTA ACACGCTGTT TAAATCCATA GAGGGGTTGA TAAAGTTGAA GTTGGACGAG      3300
     CACATAGCAA ACTGTGACCA GCTGCCGGTC AGGTCCTATG CCTTAAGGAG AAACAGGTCC      3360
     ACGGCTCTTT GCATCAACGA CCTTATCAAC AAAGTTCTGG CGCTGAAGGC GAGGGGTTGT      3420
     CAGGTTGTCG CAGCTTGCTG GATCTCCAGC TTCCTTAACA GACGAATTCT CATAAAGGGC      3480
     AAAAGCGAGG TAGAGGTGAA CAGAGGTGTT AGCCAGGGTA GCTGTCTCAG CCCAACCCTT      3540
     TTTAACCTTT ACACAGCCGA ACTACATGAT ATTAACAGTC ATAACTGCTT ACTGTTTCAG      3600
     TATGCTGATG ACTTTTTCAT AGTTTGTTTT CATAAAGACG TATCCATTGC GAAAGGTGTT      3660
     CTGGAAGACA GTATAGATAA GTTCGAAGAA AAATGCAATA GGCTAAACCT GTCATTCAAT      3720
     CCGGTGAAGT CTAAGTGATT TACTTCAACA ATCGTAGAGC TGCGCTAAAT ATCTCGCATC      3780
     AAGGAGTTGA GATCAGACAA GTAGAGCAGA TCAAATACCT AGGCAGGACT ATCTCAGCAA      3840
     ACAACTCAGC CTCTGGTCAC ATTGATCTGG CCATCTCGGA ATCGAACAGA AACTGTGCGT      3900
     TTCTCAGTGG GTGTCACTAT GGTATCAGCC CCAAAAGAGG GCTTATATTT TACAAGGCAT      3960
     TTGTCAGAAG TAGGCTAGAG TACGCGTGCT CATCATTCTG CAACCTGTCC AAATCTGCCT      4020
     TGGCCAAAAT CAAATCCCAC TGCAACCATC ACCTCAGAAA GTCGCTGGGT CTGATAATCT      4080
     GCACTCTCGT TCCTATCATA TATCACATGG CAGGAGAACT TCCCCCGGAC TACAGGATGA      4140
     GATTCCTGGC GGCGAAAGAG TTGGTTAAGG TGTTTGCATT TAATCTCCCA GCAAGTGAAA      4200
     CAGTGTCAGC AAATAGGGAT TTAAACACGG GCTACGCTAA GGCATATCGG GAGTTTGGCA      4260
     GCATAATAGA TAGAGTTGAG GTTTTCGAGA ACACAGCTTC ATTTTGCACT AAAATTAGCT      4320
     CCGACTTAGA ATTTTTCAAG GGTTCTGCAC CCAACAAGCA CGCTATAGAC CAGGCAGGTA      4380
     TCATGCTGCT CCTCGGGGAA AAGAAGGATC AGCTGACAAA GGGTGGTTTT GAAATCTATT      4440
     ACACGGATGG GTCAGTCGCA GATGGGCATT CCAGCGCCGC TTTCCTGCAC GATAGGACAG      4500
     GTTTTTTAGA TAGCTATTAC ACGCACAAAA CCCTTTCCTC GTTGTCCGCC GAGCTCCTTG      4560
     CTATCGAGAA GGCATGAGAC CATGCTATTT TGTACAATTT TCCTCGTGTC GCGCTCCTGA      4620
     CAGACAGCAG AAACGGGGCC CTCATTCTGG CGAAGAACAT TCAGGATAAC TCTATCGCCT      4680
     ACAAAATCAG AGAAAAGATC CAACAAAATC CACATCTAAG AACTGTAGAG GTTCACTACA      4740
     TTCCCGGACA CGCTACCAAA CAAACGCTGC GTACCAAACA CTAATTGACT TCATCGACGA      4800
     AATTGATGTA AAGCTATAAA CAGTACTCCA ACATCTTCTA TTCTTTGACT TGGCAATTTC      4860
     CACCTTCAAA AGGCGGGCGG CCAAATAATC CCACGCTACT CACGGGTAGT TTGGTAACTT      4920
     AAATCCTAAA AAAAAAAAAA AAAAAAAGGT TT                                    4952
//
ID   WORF    standard; DNA; INV; 4174 BP.
XX
AC   AY144572;
XX
DR   FLYBASE; FBgn0064494; Dmir\worf.
XX
FT   source          AY144572:1..4174
XX
CC   Derived from AY144572.
CC   Michael Ashburner, 18-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 4174 BP; 1010 A; 1004 C; 752 G; 1408 T; 0 other;
     TTTTCTTTTG TGTCTCTGCT TTGGTGAGTT TACCGCTCGT TTTCTGCACT TCGTTGGATC        60
     ATCTGCTTTG AATTATTGCC GCTGCAGCTG ATTGTCTGGC TCGCTCTGCT GTCTGCTCTC       120
     CTACTTTACC TGCGATCTCA CTCCGTTCTC TTATTATTCG TGCACAGTGA TTCTACTGCT       180
     GTCAATAATG GCAATCGTTT GTAGTGCAAA GAAATGTGAA TTCGGTGGTG TTATCATTGG       240
     TGATTCATTT CTTAGCTGCT GGCTGTGCGA CAATTTTGCC CACATAAAAT GTGCTGGTGG       300
     TGGAAATTTT GGCCGGCTGA ATGATCTGAT CTCGAAACGC ATGGGCCTGT CTTGGTCATG       360
     TCTGGCTTGT CGGGAGATTG AGGCCGAAAT GCGCACATTT ATGAGACAGA CTCGAACTGG       420
     GTTTCTGGAT GTCCGGAAAC AATTTGTGGC TCTCAACGAG AAATTTCTTG CCCTTGAATC       480
     ACAGTTTCTT GGGCTCAAAC TCTTGAGCGA ATCGCCTAGA CGGAAAATTC CGCATAATGA       540
     TACCAATCTC TTGCAACCTA ATCCGATTGG TACGCCTGCC TCCCACCTTC ATCCATCGGA       600
     AGCATTTCCG TGTAGGCATG CCACGCCGTT GTCTGTAAAT CCGCCAACGG TGGCTCCGGA       660
     GTTCTTTACA CCGAGCAATG TGCTTCCTTC GAGCACCCAA CTCCCCAACA GCATCAATCC       720
     CATCCCTGCA GTTTCTGTGG CCGTCACTTC TGACGCGGTG AGTGCTCCTA GTGCGGGTGT       780
     GCTGGTTGCT GACGACGTCT TGCCAATTCC TGCTCCAATT CCTGCTCCAA TTCCTGCTGC       840
     AATTCCTACT CCAATTCCTG CTACAGCCAT TGCTGCCAAT TCCTCTGCCC TTGTACCGAG       900
     ATCTCTTTTA GGTGTGGCTC CACCATCTCG ATCTCGCTCG GGACTTCAAC TTAAAGCAGT       960
     GGTCCCTCGG AAAGCAATAT TTGTTTCTCG TCTTATTCCT GAGGCTACAA CGGAGGATGT      1020
     TAAACAACAT CTTGCCACTA AACTTAACAC TTCGCCTGTT GATATAGTTG TGACTAAATT      1080
     TTCATTTAAA CATAAGCGCA ACATATCATC ATTTAAAATT CTTCTCCCTG ATTCTTTACT      1140
     ATCCTGTTCT CTAGAACCGT CAATATGGCC TGAGCATACA ATTGTGCATG AGTTCCTTCT      1200
     CAAAGATTCG AACTCGAATC CAAGAATTAC CGAACATGCT CCAAAAAACT AATGTACTAT      1260
     TTTTCCATGC ACTATCAGAA CGTTCGCAGT TTGCTGGGAA AGTTGCGTCA AATTCATACT      1320
     AATAGCGCGT CCTTTGATTT CGATGCCATC GCGTTTACCG AAACCTGGCT TAACTCCTCT      1380
     GTCAATGATC ACGAAATTTT CATTGATAGT TACACTATTT ATAGAATGGA CCGCCCATCT      1440
     TTTGCAGGTG GGGTTCTGAT TGCAGTTAAA TCTGTTTTCT CATCTGAGTT ATTCCCATTC      1500
     AATAACATTC ATGGAATTGA ATTTGTTGCA GTCAAAGTTC GTGTTGGCTC CGCATTTTTC      1560
     TATTTAACCT GCTCTTACAT TCCTCCCAGG TCTGATGCTG AGCTTTACTT ACACCACCTT      1620
     TCAGCAATTA ATAATGTTGT TTCTACATTA GGGTGCAATG ATCGAATTAT TGTCATGGGG      1680
     GACTTTAACC TCCCATTTCT TTCTTGGCTG CCTTGTAATG ACGCTAACCT GTTGTTTCCC      1740
     AATTGCCATA ATGACTTTAT CAATGGGCTA ACGGATATTT CCCTTGTCCA AATTAATGCC      1800
     GTTAAAAACA TTAGGGACAG ACTTCTTGAC CTCGTTTTTG TTAACGATGG TTCTCTTACT      1860
     ACTGTATCTA GAGCAAGCCC AATATCTCTC CCTGAAGATC CTTACCATCC AACTTTGTTG      1920
     ATATCACTGG AGTGTACACA ATCTGGAGGT GCTGACAGTT CCATGGCTCC TTGTCACATA      1980
     AAGTGTTTTC GCAAAACAAA CTTTATTGAT TTAGATCTAC ATCTCTCGCG TGTTGATTGG      2040
     TCGTTTCTTT ATTCATTACC GAACATAGAT GCAACTGTTA ACTCGTTTTA TAGTTCTATT      2100
     TACTCCGCCC TTAATACGTT TGTTCCAGAT ATCACTGTAC CTGTATCGTC CAAGCCTCCC      2160
     TGGTTCTCCA AGTATTTGTC ATACTTAAAA AATAATAAAT CCCGGCTCTA TAAAAAGTAC      2220
     CAGAAGTCGG GCTCCACGTT GGCCTTAGCT CTATACTCCT CCGCTCGCTC TCTGTTCCTT      2280
     GCCGTCAATA GTCAGTGTTA TAATCATTAC CTTTCACAAT GTAGTAGTAA TTTTCGTAGT      2340
     GATCCTAAAA AATTCTATTC GTTCGTTAAT TCTAAGCGCA AGTCAAACGT TTTTCCTCCG      2400
     TCCCTTCATT ACCAGAACAA AACAGAAGCT TCTGCTGTTG GTATTGCAAA TTTATTCGCT      2460
     AACTTTTTCC AAACAACGTA CTCGTCTCAT ATTTACAACG CATCCACTCC GTATCCGTAC      2520
     CAGCTACCTC AAGCTAACAG TATTTTTCTG CCCTTTTTCG AGGAAAGCGT TGTTCTTGAA      2580
     GGTTTGTCAT CTATGGACAT ATCGTTTTCT GCGGGTCCAG ATAAGGTACC AAGTTGCATC      2640
     TTAAAACACT GTGCCCAGTC CCTTTGCAAG CCCTTGACCT TTCTCTTCAA CCTCTCCTTG      2700
     GAACAGTCTT GTCTCCCAGT AATTTGGAAT GAGTCCTACA TCATTCCGCT TCACAAAAAA      2760
     GGTTCAAGAT CAAACATTGA AAACTATCGT GGTATCGCAA AGCTTTCCGC CATCCCGAAG      2820
     CTTCTTGAGT TCCTGGTCAC CCGGCAACTG CAACATCTTT GTTGCAGCTT GATATCTCCG      2880
     TCGCAACACG GTTTTTTCAG ACATCGTTCA ACATCGACTA ACCTTCTTGA GTTTTCTAAC      2940
     CTAATCCACC GTGGTTTTCA AATTGGTTTG CAGACGGATG TAGTTTTTAC GGACTTCAGC      3000
     AAGGCATTCG ATTCTGTGAA CCATGCTCTG CTTATTCAAA AGCTCTCCTT ATTAGGGTTC      3060
     CCAACGAATC TTCTAGATTG GATTTTGTCC TATCTCTCTA ACCGTACTCA ACGTGTTTTG      3120
     TTTTCTAACG TGTTGTCAAA TACTGTTAAT GTTACTTCAG GTGTGCCACA GGGAAGTCAT      3180
     CTGGGCCCGC TTCTGTTTAT TTTATTTGTG AACGACCTTC CTCAAGTTAT AACATACTCT      3240
     ACTACACTAA TGTATGCTGA TGATGTCAAA ATCTGTCTTT CTTACTCTGA TTGGTATTTG      3300
     CACACACGCC TTCAACTTGA TCTAAGTGAA CTACTATTGT GGTGTTCAAC TAATCTTCTT      3360
     TTTCTGAACC TTTCCAAATG CAAACTTATG ACATTTTACC GTCGCGCTCC TCATTTTGTC      3420
     TCATATGTTC TAGGAAATCA TGTCCTTGAG CGAATTTCGA GTTCAAATGA CCTCGGAGTC      3480
     CTTTTTGATC ATAAGATGTG TTTCAACACC CATATAGCTG CAACTGTAAA TAAAGCTAAG      3540
     GGTGTTTTAG CGTTCATCAA GCGTTGGTCC AAGGAGTTTG ACGACCCGTA CGTTACGAAA      3600
     CAATTGTACA TCTCGTTAGT ACGTCCTATA TTGGAGTATT GTTCTTGTGT GTGGAGCCCG      3660
     CAGTATAAAG AGCAGCAGGC TGTTATTGAA TCCGTGCAAA AGCAATTTTT AATTTTTGCC      3720
     CTTCGGAACT TTAACTGGGA CTCGGGTAGA ATCTTGCCAC CCTACCGGTC TAGGCTAAAT      3780
     CTTATTGACC TGCCGTCGTT GCACCATCGC AGAATATGCA ATGGCGTAAT GTTCGTGCAC      3840
     AAGCTCCTTC TTGGGACTGT TGACTCCCAA ACTCTCTTGG GTCAGATTGA CTTGGCCGTT      3900
     CCATCCAGAC CTACCCGTAC TTTTAGGCCT ATCCGTCTAC CCATATGTAG GTCTAATTAT      3960
     GCTGATCATG AACCTTTTAG GGTTTTATGC CATAATTATA ACTCCCTCTG TCTAACCCTA      4020
     TCCCCTGAAC TGTCTCTTAA ACTAATTGCA TGCAATATTT ATAATCATTT AAATTTAGCT      4080
     AACTTTTAAC TTATCTTTTT CTGCCTTTAG TAACTAAGTA CCATTATTAA CAGATAATTT      4140
     GTTAATTTAA TAAATAAATA AATAAATAAA TAAA                                  4174
//
ID   VEGE    standard; DNA; INV; 884 BP.
XX
AC   AF518730;
XX
DR   FLYBASE; FBgn0066140; Dwil\Vege.
XX
FT   source          AF518730:1..884
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..12
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:873..884
XX
CC   Derived from AF518730.
CC   Michael Ashburner, 18-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 884 BP; 292 A; 151 C; 133 G; 308 T; 0 other;
     CAGTGTTGCC AACTTTTGTC GACCAAAAAA GCTGTGTTTG ACGGGAGAAA ATTAAAAAAG        60
     AGCTTTTATT TTTACAAAAT GTTTAGTATT TGATCTAAAT CATCACAATA AATTTCCTTG       120
     TCGTACGATC CCATAATGCC TTTGTTTGAC AGACGCAGAC CGTATCTATA AATATATACA       180
     TTTCATTATT AACTTTTCAA TATTAGTTTT AAATATTAAT TTACCTGACG CATAAAATTG       240
     AGTTAAGCAT TTGAGTGTTT ATTTTGTTTC GTAATTTGGT TTTTACGAGA TTGACTTGGC       300
     TGAAAATTCT GAAAACAATG TCATTGCAAA AGTGGCCAAG TCCCCAAATT TATTATTTCA       360
     ACCCGAATAC TTATGTATGT ATGTATGATC GCACTTCAAT TCAAAACTTT GTAGTGTCGT       420
     TTTAAATTCG TCGCTATTAA GCCTCACTTT ACGGCACCTT TGCTTATATT CCTTTGGCAT       480
     TTTGCAGACT TAATGGACTT AATGGCACAA TTTTGAAATC ACAAAGTTCA ATAATCGTTT       540
     CGTTCACAAT AAGATCAATT GAACTATTTG AGCGAACTAA GCTTCTAGTT CAACTAATCA       600
     TATTCAAGTT CAGTTGACTC CGCTCTATTA TCGATAAGTT CGCTTATCAA AAATTGAACT       660
     ACTGAAATAT ATCGGTTTAA TTCAGCTACA ATGAACAACT ATTATTGTTA GTACGATTTA       720
     TCGCTAAAAT ATTTTAAATT TCTTAGAAAA TGAAAGAGCG GAAAAAAGGC CTTTCATAAA       780
     AAAAAATCCA GAATTCCCGC TGCCCGTTGT TTCGAAATTT TTCCCGCAAA TGCATTATCA       840
     AAAAAGCCAG ATTTGACGGG AAAAAAGCTG ATTTGGCAAC ACTG                        884
//
ID   MAR    standard; DNA; INV; 610 BP.
XX
AC   AF518731;
XX
DR   FLYBASE; FBgn0066141; Dwil\Mar.
XX
FT   source          AF518731:1..610
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..11
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:600..610
XX
CC   Derived from AF518731.
CC   Michael Ashburner, 18-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 610 BP; 189 A; 122 C; 111 G; 188 T; 0 other;
     CAGAGGTAGG CACAAAGAGA GCCAGATCAA ACTGTCAATG TATGCGTGCG CTTGCTTGTG        60
     TACGTAAGCT GCTTTACACT GCGCGAATCG TATGTGAAGA AACGAATAAA AAAATTAAAC       120
     TGCAAGTGAA ACTGCGGAAT TTTCCCACAA CCCTTTTTTA CCGAGTCGCC TTAAAAAACA       180
     AAGTACAGTC ATGAGTCTTG GATTCCTTTT ACCTTAATGT CATAAAAATG AATGCATATT       240
     TTGTATCGGC TATTATATGT ATATATTTTT CATACTATAC ATATATGTGC ATACATGTAT       300
     ATCTTACATT TATATTACAT TATGCATGTT CGCTTATATT ATAATATACT TTTTACCCTA       360
     TAGGGACAAA ATATAAATAA TAGCAAAATA TTTTTAAAGT TGCCATGTAC GAAAGTGAAG       420
     CATTAATTTT TCTGCGTGTA GCTGCGTAAC AAAGCGACAT AGTACTGCTT TCGTCAAAAG       480
     TCTGTGCGAC ACTAGCTGTT TTTTTACGCT CTCAACTTGT ACTTCGTGCT CACATCGGCA       540
     TGCACACAGA CGGCCACACG AGCAATTGCC GAGCAAAAGT GCCCGCACGG GCTATGGGCG       600
     CCTACCTCTG                                                              610
//
ID   HEL    standard; DNA; INV; 1317 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0020425; Helena.
XX
FT   source          nnnnnnnn:1..1317
XX
CC   Consensus sequence from Dimitri Petrov, 18-March-2004.
XX
SQ   Sequence 1317 BP; 419 A; 305 C; 264 G; 325 T; 4 other;
     AAAGCTCCAG GAATTGACAG GATTTGTCAT GCCACGCTAA AGGTTTTACC TATAAAAGCG        60
     ATAATATATA TAGCACTAAT CTTTAATGCT ATTTTAAGGA TCCAAGTGTT CCCAAGACAG       120
     TGGAAAATGG CTGYTATTTT GATGATCCAC AAGCCTGGAA AACCWGAAGA TGATCCTGAG       180
     TCGTATCGGC CTATAAGCCT CTTACCCTCC CTTTCTAAAT TATGGGAGAG ACTTATTGCC       240
     AATCGGATCA ACGACATTAT AAGACAAGGC AATATCTTGC CGGATCATCA ATTTGGATTT       300
     CGAAAGGGAC ACGGAACTAT TGAACAGGTC CACAGACTGG TGAAACACAT ATTACAGGCT       360
     TTTGACGACT GCGAGTACTC CAACGCTGTC TTTATAGATA TGCAACAAGC CTTCGACAAA       420
     GTATGGCATG TTGGATTATT ATGCAAGATA AAGACCCTTC TACCTGCGCC CTACTTCTGT       480
     ATTTTAAAGT CATATCTGGA AGAACGACAA TTTAAAATCA CGGTGAGAAA TAGCTACTCC       540
     TCTATATACC CAATGAGAGC TGGAGTCCCA CAGGGCAGTG TTCTCGGACC GCTACTATAT       600
     TCCTTGTACA CTGCTGATAT CCCTTGCCCG AATTTCGAAC ACATGGAAGC ACCGAACAGG       660
     ACTCTTATTG CAACCTATGC AGATGACATC GCAGTTGTAT ATAACTCTAG GGACAGCAGA       720
     GAGGCAGCTA ACGGACTACA AGAATATATT AATGCTCTGG CAGCCTGGTG TAAACGGTGG       780
     AACCTAAAAA TAAACCCACT GAAAACAACA AATCCATGCT TCACATTAAA AACGCTTATC       840
     CCGAACACCC CTCCAATTCG GCTAGAAGGA GTTACCCTGA ATCAGCCCCT GCAAGCAACA       900
     TATCTAGGTA TCACCCTGGA TAAACGGCTC ACCTTTGGGC CGCATCTCAA AAACACAGTA       960
     AAGAAATGTG GTCACAGATC ACAACAGCTG AGATGGCTCA TGAATAGAAG GAGCACTCTT      1020
     TCGATGAGGT GCAAAAGAGC TGTGTATGCG CACTGTATCG TACCGATATG GTTATACGGG      1080
     ATCCAGATTT GGGGAATTGC AGCCAAATCG AATTATAAWC GTATCCAGGT GATGCAAAAT      1140
     CGCGCAYTAC GACAAATAAC CAACTGTCCC TGGTATGTAC GTAACTCTAC ACTCCATAAA      1200
     GACCTCAATA TTCACACAGT TGAGACACAA ATTGGGAGAC ATACAAGTCG ATATAGTGAC      1260
     AGATTACTGA GCCATAGCAG TCTTCTTGCA AGACGTCTCA TCCCCGCTCG ACCTCTG         1317
//
ID   P_T    standard; DNA; INV; 3329 BP.
XX
AC   AF012414;
XX
DR   FLYBASE; FBgn0020218; Damb\P-element_T.
XX
FT   source          AF012414:1..3329
XX
CC   Derived from AF012414.
CC   Michael Ashburner, 19-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 3329 BP; 1067 A; 606 C; 695 G; 961 T; 0 other;
     CATGATGCAA TTATATAAGG TGGTCTCGTC GGCTGCCGAA TCGTTCGGAC CTTAAGCTTC        60
     AGTGCGCGCT CGCTTGTTGT AGTAAAAGGT TGGGTACGGA CAAATTTTTT GCGGAAACCT       120
     TAACCCTTGT GAAAAAAAAA TGACATATTG CCGCGTTTGC CGCAAGCACG TGCTCCGTGT       180
     GAAATTGATA AAGGCACCAA AATGTGTTGT GAGAAGAGAA TTGAGGGAGA AATCTCTAGG       240
     CTGCAGCCTG GGAGAGAACT CCAAAATTTG CGACACGCAT TTTAAAGCTT CGGAGTGGAA       300
     GTCAGCTCCA AAAAAAGGCC AAGTCTTTAA AAGAAGGCGC CTGAATGACG ATGCTGTTCC       360
     GGAAAGAGAC CCAGATCCTG AACCAAATAT TTAAAAATTA GGCTACGCCG ATTCGAGCAC       420
     GCAAACAGAG TAAGCTAACC GTGTTTAAAT AAATAAAACA ATAATTTACT TGTAATGTAG       480
     GGTAAAATTG ATAAATCGTA ACATAATTAT GGAGAACGAA AGCCTGAGAA AACAACTTCG       540
     CCTTATGGAG AAGGAGATGC TATCTTTACG CCAGCAACTT GGATAGTACG AGGAATTAAA       600
     CAAATCTTTA GGAAAAATTT TCACCGAGAC GCAAATAAGT ATTTTGAAGA GTGGAGGAAA       660
     GAGAGCTGTA TTTAATGCAA CAGACATTTC TCCCGCCATC TGCCTTCATA CCGCGGGACC       720
     ATAACTATAC AATCATCTAT ATAGAAAAGG ATTTCCTTTG CCGAGTCGGG CAACATTATA       780
     TAGATGGTTG CCAAATGTGA AAATTAATGC CGGTACGCTA GTCTATCACT ACGACCTCAT       840
     GGAAAATGAG GGAAATGTCT GAAGTGATAA GCTCTGCGTT TTGTCCTTCG ATGAAATGAA       900
     GGTTGCTGCT GCTTTCGAGT ATGACAGCTC AGCGGATGTT GTGTATGAGC CGAGCAACTA       960
     TGTTCAACTG GCCATAGCTC GTGGCTTGAA AAAATCTTGG AAGCAACCAG TATACTTTGA      1020
     TTTCAATGCT CGAATGGACG CGGATACTTT GCTATCAATT ATAAATAAGC TTCACAAAAG      1080
     AGGTTGTTGT TGCCATTGTT TCTGATTTGG GCGCTGGAAA TCAAAGATTA TGAAGGGAGC      1140
     TTGGCATATC GGAGAGTAAG TTTCGTATAC AAAATTATAC AAAAGAGATA TTTCAAACAT      1200
     TTTTTTTTTA GCAAAGACCT GGTTTAGTCA TCCAGCGGAT GAAGAATTGA AAATATTTGT      1260
     TTTTTCGGAT ACTCCACTCC GGATTAGTCA TCAACAGAAA TAGATTGACT AAGACGACAG      1320
     TCCAGCAGAC AATCAGCCAC TGTGCTAAAT CAGATGTGTC AATATTGTTC AAGATTACCG      1380
     ATAATCACAT CAATATTGGT TCGCTGGCTA AACAGAAGGT CAAATTGGCA ACACAACTGT      1440
     TCTCCAGTAC AACCGCTATG AAGTGGAGAA CGCATGCGAA ACCGCTGATC TCTTCAAAAT      1500
     ATTCAATGAT TGGTTTGACG TTTTCAATTC GAAATTATCA ACAGCAAATT CCATTGAAGC      1560
     GACGCAGCCT TATGGCCAAC AAATCGAAGT TCAACGAAGC ATTTTGGCTA AAATGTCTGA      1620
     GATTATGCGC ACGGAGATAG TTGGCAAAGC TCATAAGCTT CCGTTCCAAA AAGGTATTTT      1680
     AATTAACAAT GCATCCCTTC CCGGTTTGCA TGGATATTTA TCGGAGAAGT ACGAGATTCG      1740
     TTATATTTTA ACAAGTCGTC TTAACCAAGA CATTGTGGAG AATTTTTTTT GGCGCCATGC      1800
     GGTCAAAGGT GGACAGTTTG ACCATCCGAC TCCACTTCAA TTTAAGTCTA GGCTAAGAAA      1860
     ATATATAACA GGTATGACAA AATTGAAACA CTCTATTAAT TAATGATTGA ATTTAAAAAT      1920
     ACTAATTGTC AAATGTTTAG CTCTATGTTT CAGCCAGAAA AGTTTTCATC GTGCTTGTTT      1980
     GTAGGTTTGT TCTGTGTTCT GTATTTTGTG TTTTGTTTTG TGATTTACCA TGTTTTACAC      2040
     AATCAAAATG TTGAATGAAA GACACTTCTC ACACTTGGTT GAACCTAGAT ATAACTACTC      2100
     AAGCAGACCA AAGTCAACAC AACAAGGAGA ACGAATATGA AGATTTTGCG GTAGACATTG      2160
     ATAACAACAT AGCACCAGAA ACTGAGCTAG ACGAGCTAAA GGAGGATGCC ATTGAGTACC      2220
     TAGCAGGCTA TGTTATCAAA AAACTGCGAC TTTCCAATGA GTTGGCCGAA AATTCGACAT      2280
     TTACCTAGGT AGATGAGGTC TCGCAGGGTG GACTCATAAA ACCTTCTGCA CAGTTCAAAA      2340
     ATGAACTGAA AGAGCCGGAA ATAATATTTT TAAACATTAT AAAAGAACAT TTTAACATAA      2400
     CAAAAAACGT TAAGGAAAAT TTGATAATGG ATTCCGAAAA TGTTAATATA AATTTAGATA      2460
     TAACGAGAAG GAACGTGTGA GTCGCTTCTG GGGACAGGAC TCTACTTATA CCCGTACTAA      2520
     GTCAGTGTTT ACATTTTGGA GCATAATTTT TTTAGAATTT TAAAATTAAA AAAAAAATTT      2580
     TATATTTTAC ATTTTTTGCT ACATCTGTTA TCTACATCTA CATTTACAAT GTATATTATA      2640
     CATCTAACAT GTAGTATACA TGTACCATTT AGAATCTCCT CCGCTAGGGG TTGCTCGCGC      2700
     ACTGAACGCG GCAGTGTGTG CGAGCGAGAA AGACAATGAG TATCATGGTC GTTGGCTGGA      2760
     GGGGGGCAGG GGAAGGCAAG CTGAAAATTA ATTTCTTCAT TCTGGCTATA ATTATGATCC      2820
     GATTTGATTC AGATTCGGCA ATCTGGTAGA TATGGGCACT CTCTACATAC TATCTGTCGT      2880
     ATCTTAAAAA TGTGCCCTGT CCAACAGATT TTCGTCTTTT GTGATGCGGA AAGGGGGTCA      2940
     GCCCGAAATT TTGAAATACA CTTGTAGCAG TGGAATATCA CATGAGTCTG GAAACCAAAT      3000
     TTGGTTGCCC TAGCTCTTTT AGTCTCTGAG ATCTAATCGC TCATCGAGAC AGACAGACAG      3060
     ACAGACGGAC AGACAGACAT GGCTCTATCG ACTCGACTAT TGATGCTGAT CAAGAATATA      3120
     TATACTTTAT GGGGTCGGAA AATTTTCCTT AAACACCTTT TATTATAACC GGCAAGTTTA      3180
     AACCCCATGG ACCATCAGAG GGTTAATCCA CAAGCTCTAT TGTTGTTTCA CTCACACTTA      3240
     CTGAGGTGAG CCGTTTCACT CGCACTTATT GTAAGTATTG TTAAGGGCCT GCTGCTGCTG      3300
     ACGAGACCAC CTTATATAAT TGCATTATG                                        3329
//
ID   P_O    standard; DNA; INV; 2986 BP.
XX
AC   X71634;
XX
DR   FLYBASE; FBgn0012207; Dbif\P-element_O.
XX
FT   source          X71634:1..2986
FT   SO_feature      CDS ; SO:0000316:join(173..453,542..1221,1288..2013,2198..2781)
XX
CC   Derived from X71634.
CC   Michael Ashburner, 19-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 2986 BP; 1022 A; 508 C; 609 G; 847 T; 0 other;
     CATGGCAAAA CGAGTGCCTT CGTAAGGTAG TCTACTCGGC TGCCTTTGCT TTCGGGTTTA        60
     CTAGCTCTTT TGCCAGTGCA CTTTGCTTGT CAAAGTGGAA GGTTGGTTAC GGACGATTTT       120
     TTCTCGTTTT ATTTTTCGCA TTAACCCTAA CGTGTTCAAA AAAAAGAAAA AAATGAACTA       180
     TTGTTATTTT TGCCGCAAGA ATGTACCGGG CGTGAAAATC ATTCATGCCC CGAAATGTGA       240
     AATGAAGAGA AAGCTGTGGG AGGAAAGCCT GGGGTGCAGC CTAAGCAAAA ATTCCCAAAT       300
     ATGTGATACA CATTTTAATG CGTCTCAGTG GAGGACTGCC CTCAAGGGGA AGATTTATAA       360
     GAAGAGACGC TTAAACAATG ATGCCGTTCC GCAAAGAGAG AAAGAGGATG AAAGTGTTAA       420
     AGAAGGCTAT GCTAATGCCA GTACGGAAAC TGAGTAAGTT TGGCGTGTGA AATATATATG       480
     TACATATATT TCTTTTTGTA CATATGGATG GATATGTAAA CATAATGAAA CTGTCTTGTA       540
     GGGACACAGT GATAAATCAT TCAACGTCCA TGGAAATAAA GACTCTGAGG CAAAAGATTC       600
     GTGCTTTGGA GGATGAAGTA CAGAGCTTAC GTAAGCTCGT AGAGGACGCA AGCCAGTTAG       660
     AGAAATCTTT AAGTACCATC TTCACTCAGA CCCAAATAAA AATTTTAAAG AGTGGTGGAA       720
     AGAGGTCAGA ATTTAATTCA GATGACATAT CATGGGCTAT GTGCCTCCAT ACCGCAGGTC       780
     CTAGGGCATA TAACCATCTG TACAAAAAAG GATTTCCATT ACCTTGTCGG GCAACATTAT       840
     ACAAGTGGTT GTCAAACGTG GAAATACAGA CTGGTTGCCT GGATGTGGTC ATCGATCTTA       900
     TGGACAATAT GGACATGGAT ACGGCAGATA AGCTTTGCGT ATTAGCATTC GACGAAATGA       960
     AGGTTGCTGG TACATTCGAG TACGACAGCT CGGCGGATCT TGTATACGAG CCAAGCGAAT      1020
     ACGTGCAACT TGCGATGGTT CGAGGATTGA AAAAATCGTG GAAGCAACCA GTGTTCTTCG      1080
     ACTATGATAC CAGAATGGAC GTGCCAACTC TTTATGAATT AATAAAAAAA CTACACAGAA      1140
     GAGGATATTT TGTGGTATCA ATTGTCTCCG ATATGGGTGC TGGAAACCAA AGATTATGGA      1200
     GAGAGCTCGG TATATCTGAA GGTAAAGTAT ATTCTTATTA TGAATGAAAT CAAAGATAGT      1260
     TGTTAATTTT TTTAAATTTA CAATTAGAAA AAACCTGGTT TGGCCATCCC GAGGATGAAG      1320
     ATCTGAAAAT TTTCGTGTTT TCAGATGCAC CACATCTAAT AAAGCTGGTT CGTAACCATT      1380
     ATTTGGCTAC AGGTTTACAT ATAAACGGAC AAACATTGAC CAAGTCGACT GTCGAACAAA      1440
     CTATAACTCA CTGTTGTAAA ACAGATGTAA CAATATTGTT CAAAGTAAAT GAGAGCCATT      1500
     TAAATGTTCG CTCCTTTGCC AAGCAAAAGG TCAAATTAGC AACACAATTA TTTTCGAATA      1560
     CAACCGCCAG TGCCATCAGA CGCTGCTACT CTTTAGGCTA TCAAGTTGAA AATGCAGTCG      1620
     AAACCTCGGA TTTATTTAAA CTCCTCAACG ATTGGTTCGA CGTTTTCAAT TCAAAGCTGT      1680
     CAACGTCCAA CTGCATCGAA ACTACTCAGC CTTATGGCAA GCAGCTCGAA CTGCAAAGAG      1740
     ACATTTTAAA ACAGATGTCT CACATTATGA GTAATAGGAT ATGCGGGCAG ACCCATAGGC      1800
     TCCCATTCCA AAAAGGGATA CTAATAAACA ATGCATCTCT TGATGGACTG CATGCCTATT      1860
     GCAATGAAAA GTACGGAATG GAGTATATTT TGACAAGTCG GCTGAATCAA GATATTGTTG      1920
     AAAATTTTTT CGGAGCCATG CGGGCGAAGG GTGGACAACA TGACCATCCG TCACCCTTAC      1980
     AATTTAAGTA TAGATTAAGA AAATACATTG TAGGTAAGAC AAAACTAAAA CAATTTGTTA      2040
     ATTAGCAAAT AATTGATTTT AATAATAATA ATTGTCAAAT GTCTAGATTT ATGTTTCAGC      2100
     AAAGTTTGAA TTGTGAATGT TGGTAGTTAT GTGTTGTCCT GTTTTATGTG TTTATTTGAT      2160
     TATTTTCATT TATTAATAAC CCTTAAATAT TATTCAGCCA AGAATACAGA GTTGTTAGCC      2220
     GGTAACGGAA ATGTTGACGA GGACAACTGC GACAGCTGGC TCAATCTCAA CATAACTCCA      2280
     AATGGCAATA AGGAGAATGA GCCCGATGAA GGGAAGTGGA AAGGGTGGTC GAAAGAGTTC      2340
     GAAGAGTTCG AAATAGAGAT GGACAACAAC ATAGCTGCAG AGTACATCAT GGATGAACTA      2400
     ACGGAGGACG CTATGGAATA TCTAGCAGGT TATGTTGTTA GAAAATTAAG GTTGTCTAAT      2460
     GAATCAACGC AATCTGGATT TACATATGTG GATGAGGTAT CGCACGGCGG GCTTATAAAG      2520
     CCGTCAGACC AGTTTACTGC TACATTAAAA CACTTAGAGT CTATATTTAT AAATAATATT      2580
     CACAATACTA TTGAAATAAC TAAAGACATA AAAAAAAAAT TATTAATTGC TGCTAAACAT      2640
     GTACAAATTG ATAATAATGT AAAACAATTT TATTTTAAAA CTAGAATTTA TTTTAGACTT      2700
     AAATATTTAA ACAAAAAATT AGCTATTAAG AATCAAAAAC AACGTTTAGT TGGAAATTCA      2760
     AAATTATTAA AAATAAAATT ATAAACACAA AAATAACATC GTCTCAATTC ATTATTGTAG      2820
     GCTATTTTCA CCCCAACAGG CAACAAGGGG TTAATCAACT CACAGCAGTG CCTTTCAGTC      2880
     GCACTCATGT ACTATGTGCC ATTTCACTCG CACTCATTGC AATCATACAA GAGCTAGTTT      2940
     GGCAGCCGAG TAGACTACCT TATACACAAG CACTTATTTT GCCATG                     2986
//
ID   P_M    standard; DNA; INV; 2935 BP.
XX
AC   X60990;
XX
DR   FLYBASE; FBgn0012207; Dbif\P-element_M.
XX
FT   source          X60990:1..2935
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..31
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:..
FT   SO_feature      CDS ; SO:0000316:join(155..447,512..1179,1242..1967,2159..2733)
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044301; Dbif\P-element\T"
FT                   /protein_id="CAA43305.1"
FT                   /translation="MKYCKFCCKVVTAGVSLVHVPKCSVKRKLWEESLGCSLGGNSQI
FT                   CATHFNDSQWKSTENKGQANKRRRLNKDAIPTKEIEPEPENVKEGYTSSSTQTECCSL
FT                   SKENKSLRQTIRAMEYDLQRLRSQLEESRQLEESLGKIFTETQIKILKNGGKRSTFTS
FT                   DDISAAICLHTAGPRAYNHLYKKGFPLPSRTTLYRWLSDVEIKTGCLDVAIDLMENDA
FT                   MDEADKLCVVAFDEMKVAAAFEYDSSADVIYEPSNYVQLAIVRGLKKSWKQPIFFDFS
FT                   TRMDADTLNNIIRKLHTKGYPVVAIVSDLGSGNQRLWSELGVSESKTWFSHPTDEHLK
FT                   IFVFSDTPHLIKLVRNHYVDSGLTLNGKKLTKTTVQQTLNHCTKSDVSILFKISENHL
FT                   NVRSLDKQKVKLATQLFSNTTASSIRRCYSLGYDVENACETSDLFKLLNDWFDVFNSK
FT                   LSTANCIQSTQPYGKQLEFQRDVLEKMTKIMSSEILGKSQKLPFQKGIIVNNASLDGL
FT                   FLYLKDKYNMEYLLTSRLNQDIVENFFGAMRSRGGQFDHPTPLQFKYRLRKYLIAKNT
FT                   ELLRNTGNVEEDNTDSWLNLDFSSKNSENWENNPEDVEPEDDEQTIANNIPADIEMDE
FT                   LTEDAIEYVAGYVIKRLRTSDCVEQSSTFTYVDEVSHGGLIKPSDQFKNKLKELEKIF
FT                   LHYTKENFKITKNLKEKLIIAAQNVELDKFVISFYFKIRIYFRVKYLNKKICIKNQKQ
FT                   RLLGNSKLLKMKL"
XX
CC   Derived from X60990.
CC   Michael Ashburner, 19-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 2935 BP; 1003 A; 495 C; 589 G; 848 T; 0 other;
     CATAATGGAA TAACATAAGG TGGTCCCGTC GTGAGGCCGA AGTTTTACGA AGTATCCACT        60
     TATTTCAGTG CACGTTTGCT TGTTGAAGAG AAAGGTTGTG TGCGGACGAA TTTTTTTTGA       120
     CATTCTTTAA CCCTTAAGCG TGACACATAT TAATATGAAA TATTGCAAAT TTTGCTGCAA       180
     AGTTGTGACG GCGGGAGTGA GTCTTGTTCA TGTTCCGAAG TGTAGTGTAA AAAGAAAATT       240
     GTGGGAAGAA AGCCTGGGGT GCAGCCTGGG TGGAAACTCG CAAATCTGTG CCACACACTT       300
     TAACGATTCG CAGTGGAAGT CTACAGAGAA CAAAGGCCAG GCAAATAAAA GAAGGCGACT       360
     TAATAAAGAT GCCATTCCAA CAAAAGAAAT AGAGCCTGAA CCAGAAAATG TAAAAGAAGG       420
     CTACACCAGT TCCAGTACGC AAACAGAGTA AGTTAAAATA GTAAAAGAAG CATGTGCAAT       480
     AATGTAAACA ATAATGTAAC TGTGTTTGTA GGTGCTGTTC ATTGTCCAAA GAAAATAAGA       540
     GCCTGAGGCA GACAATTCGA GCGATGGAGT ACGATTTACA ACGTTTACGA AGTCAGCTTG       600
     AGGAGTCTCG CCAATTAGAA GAGTCTCTTG GGAAAATTTT TACAGAGACT CAAATTAAAA       660
     TCCTTAAGAA TGGTGGAAAA AGAAGCACAT TTACATCAGA CGACATATCG GCAGCTATTT       720
     GTCTCCACAC CGCTGGCCCT CGAGCGTATA ACCATCTATA CAAAAAAGGA TTTCCATTAC       780
     CCAGCCGTAC CACGTTGTAT AGATGGTTAT CAGATGTGGA GATAAAGACA GGATGTCTGG       840
     ATGTTGCCAT AGATCTTATG GAAAATGATG CAATGGATGA GGCCGACAAG CTTTGCGTAG       900
     TGGCCTTTGA CGAGATGAAG GTCGCTGCAG CCTTTGAGTA CGACAGCTCA GCAGATGTGA       960
     TTTACGAGCC CAGCAACTAT GTGCAACTGG CTATTGTTCG TGGTCTCAAA AAATCGTGGA      1020
     AGCAGCCAAT TTTTTTTGAC TTCAGCACCC GAATGGACGC AGATACCCTG AACAACATAA      1080
     TAAGGAAGCT ACACACAAAA GGGTATCCAG TAGTAGCTAT TGTATCCGAT TTGGGTTCTG      1140
     GAAACCAAAG ACTTTGGTCA GAGCTTGGTG TATCAGAATG TAAGTTTGTC ACAAGCATTA      1200
     AAATTAAAAA TAATCTTTAA TATTTTGTAA TTTTTTTTTA GCAAAAACCT GGTTTAGCCA      1260
     TCCAACGGAC GAACATTTGA AAATTTTCGT TTTTTCGGAT ACACCACATT TAATTAAGTT      1320
     GGTCCGAAAC CATTACGTGG ATTCCGGATT AACATTAAAT GGAAAAAAGT TGACGAAAAC      1380
     GACAGTACAA CAGACACTTA ATCATTGTAC TAAGTCAGAT GTCTCTATTC TGTTTAAAAT      1440
     AAGCGAGAAC CATTTAAATG TTCGCTCGCT AGATAAACAA AAGGTAAAAT TGGCAACGCA      1500
     GCTTTTTTCC AACACTACCG CCAGCTCCAT CAGACGCTGC TATTCGTTGG GGTATGATGT      1560
     GGAGAATGCT TGCGAAACGT CGGATTTATT TAAGTTGCTG AATGATTGGT TCGACGTGTT      1620
     TAATTCAAAA TTGTCAACGG CAAATTGCAT CCAATCCACG CAGCCTTATG GGAAGCAACT      1680
     TGAATTCCAA AGAGATGTTT TGGAAAAAAT GACAAAAATA ATGAGTTCCG AAATTCTTGG      1740
     CAAATCCCAA AAGCTGCCAT TTCAAAAAGG GATTATTGTT AATAATGCAT CCCTGGATGG      1800
     ATTGTTCTTA TATTTAAAAG ATAAATACAA CATGGAGTAT TTATTAACTA GCCGTCTTAA      1860
     CCAAGACATA GTGGAAAATT TTTTTGGCGC TATGCGATCG AGGGGTGGTC AGTTTGACCA      1920
     TCCAACTCCA CTACAGTTTA AGTATAGGTT AAGAAAATAT TTAATAGGTA TGTCAAATTT      1980
     AGAAAAATGA ATTACAAATT AATTCATTTT ATTAATTAAA TTTTTTAAAT GTTTAGCTAT      2040
     ATGTTTCAGC AAAGTGTGGA TCGAGAATGT AGGTAGTTAT GTGGTGTCTT ATGTGTTTTG      2100
     TCTTTTATAT GTTTCTTTTA ATTTTATTAT TTACTAATAA TTCTTATACT TTATCCAGCC      2160
     AAGAATACAG AATTGTTGAG AAACACTGGA AATGTGGAAG AAGACAACAC TGATAGCTGG      2220
     CTTAATTTAG ACTTTAGCTC TAAAAATTCA GAAAATTGGG AAAATAATCC TGAAGATGTT      2280
     GAGCCTGAAG ATGACGAACA AACCATAGCA AACAACATAC CTGCAGACAT CGAAATGGAT      2340
     GAGTTGACGG AGGATGCCAT AGAGTATGTC GCCGGCTATG TCATTAAAAG GCTAAGGACG      2400
     AGTGACTGCG TCGAACAATC TTCGACATTT ACCTATGTAG ATGAGGTGTC TCACGGCGGT      2460
     CTTATTAAAC CGTCGGATCA ATTTAAAAAT AAGCTCAAAG AGCTAGAAAA AATTTTTTTG      2520
     CATTATACAA AAGAAAATTT TAAAATAACA AAAAATTTAA AAGAAAAATT AATAATCGCA      2580
     GCACAAAATG TAGAGCTGGA TAAGTTTGTA ATTTCTTTTT ATTTTAAAAT AAGAATATAC      2640
     TTTAGAGTTA AGTACTTAAA CAAAAAAATT TGTATTAAGA ACCAAAAGCA GCGTTTACTT      2700
     GGTAACTCAA AACTATTAAA AATGAAACTT TAAAAAAATT GCTCGTCTCT TTATTATAAA      2760
     TGGCATATTC AAAGCCTACG GACATGCTAA GGGTTAATCA ACAATCACAT TGCCGCCTCA      2820
     CTCACACTTA CTACGACACT CAGTTTACTA TGTTCCTTTC ACTCGCACTT ATTGCAAGCA      2880
     TACAATAAGT GGATGTCTGT TGCCGACGGG ACCACCTTAT GGTTATTCCA TCATG           2935
//
ID   SGM    standard; DNA; INV; 823 BP.
XX
AC   AF043638;
XX
DR   FLYBASE; FBgn0069871; Dsub\SGM.
XX
FT   source          AF043638:1..823
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..16
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:765..780
XX
CC   Derived from AF043638.
CC   Michael Ashburner, 19-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 823 BP; 217 A; 189 C; 188 G; 229 T; 0 other;
     TTTTATAACC CGGTACTCGA AGAGTAAATA GGGTATTTTG TATTTGTGCA CAAAGTGAAT        60
     GTATGTAACG CACAGAAGGA AACGTCTCCG ACCCCATAAA GTATATATAT TCTTGATCAG       120
     CATCAATAGA CGAGTCGATT GAGCCATGTC TGTCTGTCCG TCTGTCCGTC CGTCTTGTTG       180
     AGCGCCTGGA TCTCAGAGAC TATAAGAGCT AGAGCCACCA AATTTTGCAT CCAGACTTCT       240
     GTATGCTCAC ACTGTTACAA GTGTATTTCA AAAAAAGAGC GTACGCCCCC TTCCGCCTCC       300
     GCAAAAAAGG CGAAAACCTC CCAAGTCTAC AATTTTGAAG ATAGTAGAAA ACTATTCCGT       360
     AGGGAGTGAC CATATCTATC AGATCACCAA ATTGGGGCAT TATTGGAGCT TTATTATAGC       420
     CACAATGAAG ATATTAATTA GCAGTGGCCA AACCCACCCC GTTCCGCAGC TTATATTTGT       480
     TCGCGCAATG TGTGGCGTCT GCCCCTGCGG TTCCTCCGCC TCTGCCATAT TAGCTTATAT       540
     TTGGTTTTTT GCACATTCTC TCATTCACAC TTCTCTTCGC GCAGTGGCCG CACACTGGCC       600
     GTCTGCCGCT GGCTCTGCCT CTGCCGTGAG TCTGCAGTGT GTGGGCTAGG AAGGGGGCCG       660
     AGCTAAAGGA GCGTGTTGGC GAGAGTAGTG TTGTTGATGT AGATGACACA TGAAGAAAAA       720
     ATTAAAAATT TGACAAATAA CCGCTATTGT ACAGATGTAG TACTGAGTGC CGGGTATAAA       780
     AGTTGTGACG CGTAAGAAGC GTCTCACAAG TCCCTTCTCG TTG                         823
//
ID   DDBARI1    standard; DNA; INV; 1676 BP.
XX
AC   Y13852;
XX
DR   FLYBASE; FBgn0020486; Ddip\Bari1.
XX
FT   source          Y13852:1..1676
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:<1..198
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1423..1676
FT   SO_feature      CDS ; SO:0000316:331..1349
FT   SO_feature      pseudogene ; SO:0000336:331..1349
XX
CC   Derived from Y13852.
CC   Michael Ashburner, 19-March-2004.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 1676 BP; 600 A; 319 C; 348 G; 497 T; 0 other;
     TCGCTTATTG CTGCTGCTTT TGTACTCAGA AACGAACATA ACGGTATTTG TCGTCCTTCT        60
     ACATCTATAC AGAAGCAAAA GAAAGAAGAA GTGGAAAAAA TAACTGTTCA TGGACTAAAA       120
     AAAGAAGCAT TGAACTGATG CTTGTCTGTT GTCAGAAGTA TTTACACACA ATTTTTACGC       180
     GTCAAAATTA TTTACACAGT GCAAATTGAA GATTAGTCTT TGATTTGCAT TGTGTAAGTG       240
     AAGTTCTAGT TGATGTTGAA CGCTTAATTG GAAGTTTAAC TAACTGTTAA CAGTTAAATT       300
     AATAGATAAA ACTAAGCATT TAATTTGTAA ATGGCAAACA CAAAGGAGCT ATCAGTTGAG       360
     CATCGAGCCG AGATTGTCAC TAAATTTAAG GCTGGTACTT CTGCATCCAA ATTAGCAGAG       420
     TTGTACAAAA TATAACGTAA GACTGTGTAC AATTTATTTA AAAAAAGGAC ACACTGGGAA       480
     ATTTGGAAAA TAAAAAGAGA ACTGGCCGAA AAGTTGCATT GAACCCAAGT GACTGCAGAC       540
     ACTATAGGAG ATTGTACTAT GTAATCCCAC ATAAGTCCCG TTAAAATTGC CGCAGACTTA       600
     CGAAAAATTT AATTGGAAAA CATATTAGCG ATAGTTACAC GCGTCGCAGA ATGAAGGAAG       660
     TTGACATCAA CACCTATGTT GTTCGTGCAG TAGTTAATAT TACCCCAAGA AACAAGGAAA       720
     AACGTCTCGC ATTTGCCTTG GAGTATAAAG AGAAGCCTCT CGAGTTCTGG TTTGATGTTT       780
     TATGGACTGA TGAAGTTGCG TTTCAGTTTC AGGGATCCTT TATCAAGCAA TTTATGCATC       840
     TCCCAAAACA ACTAAAGGGT AATGCCGACC AGCCTATCAA TCGGTTTGGT GGTGGCACAG       900
     TGATTTTCTG GGGCTGTTTA AGCTACTATG GATTTGGAGA CATGGTACCG ATAGAGGGTA       960
     CACTAAATCA AACAGGATAC CTCCATATCT TAAATGAGCA CGCATTAACC TCAGGAAAAA      1020
     GACTGTTCTC CACGAATGAC TGGATCTTGC AGCAGGACAA TGCTCCATCC GCAAAGGGCC      1080
     GAGGTCCAAC CAAGTTCTTG AAAGACATAA ATCAGGCGGT ACTTCCATGG CCCGCACAAA      1140
     GCCCCGATCT GAACATTATC GAAAATGTCT GGGCTTATGT TAAGAGTCAG AGGACATTTG      1200
     AAAGAGATCG CCAGCGCGAT GAAGCTATAG CCGAAATTAC GAAAAAATGG TCCAAATTAC      1260
     CTCTTGAGTT TGCGCACAAC TTGGTCCGGT CAATACCAGC AAGGCTCCAA GCTGTCATTG      1320
     ATGCCAGAGG CAGAGTAACT AGATATTAGT TGGCTTATTA AAATAATATA AAATATTTCG      1380
     TTTAAATTCA ATAAAAAACG CAAAAATCAA TTAAAAAAGC TGTGTGTAAA TAATTTTGAC      1440
     GCGTAAAAAT TATGTGTAAA TACTTCTGAC AACAGACAAG CATCAGTTCA ATGCTTCTTT      1500
     TTTTAGCCCA TGAACAGTTA TTTCTTCCAC TTCTTCTTTC TTTTGCTTCT GTATAGATGT      1560
     AGAAGGACGA CAAATACCCT TATGTTCGTT TCTGAGTACA AAAGCAGCAG CAATAAGCGA      1620
     TCAAAGTTGA CAATTGAAAA AAAAGCACGT TGTGTAAATA CTTTTGACCA CCTCTGT         1676
//
ID   TC3    standard; DNA; INV; 1743 BP.
XX
AC   AC009537;
XX
DR   FLYBASE; FBgn0061191; Tc3.
XX
FT   source          complement(AC009537:133476..135218)
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..27
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1717..1743
XX
CC   Casey Bergman & Michael Ashburner, 2-April-2004.
XX
SQ   Sequence 1743 BP; 599 A; 284 C; 297 G; 563 T; 0 other;
     CAGTGCCGCT CAACTGAATA GGTTTGAAAA ATCTTTCTCA CATTTCTCTT TTTAGTTTTT        60
     CTTTGGTCCA ATTGCGTTTT TTTCTATAAT TTTTTTTTTT TTGTTTTGAA CCTTCAATTC       120
     CTTACTTATT ATGTGCAAGA AAAAAATAAT GGGAAAAATG CAACGGTAAT TCGGAATTTT       180
     GCTCTAATCG TGAAATTTGC TCAATGTGTG GACTATTCTT GGCTCATCTG AATAGGTTTT       240
     ACCAAAGACA CTTGAATAAT ATATAATATT AATTATTAAT TAATATTATT ATATATAGTA       300
     ATATATTAAT ATTAATATTC TAGTGTCTTT GGTTTTACAC TTTTGACTTC ACTTTTTGTT       360
     TGACCGCGTG ATTGTAAAGA GTTAAATTTT TTTTTGTATT CTAAAATTTA AATCATCTTT       420
     TATCATCTTT TTCTAAAATG GGCCGCGAAA AACCTTTATC CGATTTTGAA AAAGTTCAAA       480
     TCAAAGGCTA TATTGAATCT GGCTTAAAAC ACTTTGTAAT AGCCAAGAAA ATCGGTCGAA       540
     GTCAAAACGT TGTGAGTAAT TTTCTCCGCA ATGAAGCCGA CTAATGGAAA AAATGAAAGG       600
     AGGAAAAAAA TATTGTATGC AACAATACCA TAAGAGAGGC CACTTATACT ACGAACTGCC       660
     TCAAATTCTC ACCTTTCTGC TGGAAAAATT AAGGAAAAAT GCGGTGTAAA TGCTAGTGTG       720
     GCCACGGTAA AACGAATTAT TCAAAGTTGC AAATACTTGA ACAGATTACA AATGAAAAAA       780
     AAAAACACCT CTCAATCATG CTCGTAAGGA AGCACGACTG CGATTTGCCC GAGAACACAT       840
     GACGTGGAGC AAGGAGTGGA AGAAGGTGGT TTTCTCCGAT GAAAAGAAGT TCAACCTCGA       900
     TGGACCGGAT GGCTACTATA ACTACTATTT CCATGATATA AGAAAGGAAG ATTGTTTTTT       960
     AAGCCGTCAT CACACTTGTG CAGGTGGTGT AATGGTGTGG GGAGCCATAT CTTTTTATGG      1020
     AACTTGCGAG TTCCAGTTTG TCACCTCGAA AATGAACGCA AACGTGTATA AGACTGTGCT      1080
     TCAAAAGGCT TTTCCAGAGT TTTGTGAGAT TTATGGTCAT ATTCAATAGA CGTACCAACA      1140
     TGACAACGTG CCCATCCATA CGGCTCGGAT TATAAAACAG TGGATCACAG ACCAAAACGT      1200
     TAAATTGCTC GAATGGCGGC CGCCTTACTC CCCTGACAAT AACATTATTG AAAACATTTA      1260
     AGGACTTTTG TCCAGCAGAG TGTACGAAGG AGGAAGACAA TTTAGTGACA CTGAGACCGT      1320
     AGTTGAAGCA ATTCAAAAAG CCTGGGCAAC AATTTCACTA AATGAAATTA AAAAATATTA      1380
     TGATCCCTTA CCAAACCGTA TGTTTGAAGT AATTAAGAAC AAGGGTGGCC ATACCAAATA      1440
     CTAAATAATG CTAAAACAGT GCCTTTTATT ATTTAAACTA TCCAGTGCCT TGGAATTTTG      1500
     GTTTATACAA ATAAATGTAT ACTTTATTAA ATACTATTAA ACTTTATTAA ACTTTTTTTG      1560
     TGTTTTTGAA AAAATAAAAA TGATATAAAA ACAAATTTAA GAGATCAGAA ACTTTGCTAT      1620
     TTAACAAATG AGTGATCTAT TCATACATAC AAATTTATTT CGCTTAAATC GGATTGCATA      1680
     TAACTAAGTT ACAACGTTTC AATCCTAAAC AAATAGTCAA ACCTATTCAG TTGAGCGTCA      1740
     CTG                                                                    1743
//
ID   Beagle2   standard; DNA; INV; 7220 BP.
XX
AC   AF365402;
XX
DR   FLYBASE; FBgnnnnnnnn; HMS-Beagle2.
XX
FT   source          3R.Release.3:2000950-2008169
XX
CC   Casey Bergman & Michael Ashburner, 2-April-2004.
XX
SQ   Sequence 7220 BP; 2491 A; 1622 C; 1399 G; 1708 T; 0 other;
     AGTTATTGCC CTATAAGTTA TCGTCCCACA TCTTATATTT CAACATCATT TCTGGGTAAA        60
     CACAAGTGCC CAAAATGCTG ACCAAAGGTC TGCATTCTTT CCGCTGTCAA CGACCAGCTA       120
     AAAGTGCGAT CATCTGCACT TCTCCGCCGC GTAGCCGCTG ACGACCACTG ATTCGCTGCC       180
     GACGCCTGCT GCGACGCTGC CGACGCCCAC ACTTGATTGC TAGGGACTTA GGGAAATATT       240
     TTGTATCTTA GCTTTAGTTT CAAATGAACA ATTACAATAA ACGGTCGCTT GCGATCTACA       300
     AAATAAAAAT CAATAAACTG TAATTATTTA CTGGCGCCCG AACAGGGACC AGCGAATAAC       360
     GCGTACGACA GACAAAATTC TAAGTCGCGA AGCAAAATAA AATTTTGCAA AAAAAAATTC       420
     GTTGGTTAAA TTAGTGCCGA AGAAACTCCC GTGAGTTAAT AAAAAATTCG CGGTCGGCAT       480
     TTATAAAAAA AAAAAAAAAA AAAAAAAACT TTTGTTTTCC GGAAGAGGAA AATATTCAAC       540
     GGCAGAATAT TGCCCATCGG TGGATCACAT CTTTTGTCAG GCCAGCCCGC AGAAGACCTT       600
     ATTTGGAGTG CTGACGTGGA TCCCCAGTAG CACAAGGCAA AAAGGATGAC CTTCACCCAG       660
     CCAGGAGGAG TGACCACAGC AATTTTATTG TGAGACAAGA AAGAAATATT TTTTTTTATA       720
     GAATTTATTT TAAGATTTAA AAATTTAATA CACTTGTACT TTAACATTTC ATCGACCCCA       780
     GATCGGTTTC GACAGTACAT TTAATTTTTT AATTTCCCTT TTAATTTACT TACGGTTTTG       840
     GAAAATATAA TTCAAGCTCG AATAGTTCGA ACGATTTAAA TTGCCAAGAT CATAACACTC       900
     GTGCCTTTTT GTTTTGGTTA AGATCGTTTT GTGTAAGTGT TGTCCGAGTC AAAAGCCAAC       960
     ATGGCAAACC CCAATAATCT AATAAGACCA CCGGTTCTCA GTTCTAATGA GAGACCGGTA      1020
     CCCGTAGAAA GACCCGACCT GCCTGAACGG CAGCGCGTAG ATATGAATGT TGAACAGTTG      1080
     ACAGGGTTAA TTGGCCAAAC GGTAGCCCAA ATTTTACCTG GACTGATAAA ACAAATGAAC      1140
     AATGACACAC TTGACTTTAC TGACGTGAGA GATCAGGTCG TCGAGCCTGA ATACAGAAAC      1200
     AATTTAGGGG ATTTTGACAG GGTACCTGAT ATCGTAAAAT CGATCAGGGA ATTCTCTGGG      1260
     GACCCAGCAG AATTCGGCTC TTGGAAAAAG AGCGTTGATA GAATCATGGA AACTTATACC      1320
     CCATTTGTGG GTACTCCAAA ATATTATGGT ATACTTCATA CCATAAGAAA TAAAATTGTC      1380
     GGAAGTGCCG ACGTGGCACT CGAGTCATAC AGCATTCCGC TGGATTGGAA TTCCATGTCA      1440
     AGATGTCTCA CTCTACATTA CGCAGACAAA CGAGACATAA CTACACTAGA ATACCAAATG      1500
     TCAATTTTGG TCCAAGGTCG CCAACAGTCG GTGGAAGACT TCCACCAAGA CGTTTATAAA      1560
     AATCTCTCGC TTATTTTAAA TAAGCTTAGC TGCATGCAAA TGACCAGAGA ATCCGAGCAT      1620
     TTCATTACAA AAATGTACAG AGATAAAGCT CTGGACACTT TTATTAGAGG CCTTCGAGGA      1680
     GACTTACCTC GCCTCTTGGC TATAAAGGAG CCAGCCGATC TCCCTTCAGC TTTGCATTAT      1740
     TGCTTAAAAC TTGAAAACCA AACATACAGA TCAAACCATG CAACAAATAA AGGGCAACAG      1800
     TCGAGCTTCA GAGTAAACGA AAAACCCATA CCGGCACCCC GCAATTTTCA GCCATCGAAC      1860
     GCCTTTGGCC ATCGACAGCC TCCACCGGTC CCTCCACGAA ACTTCATGAG GGGACCACCA      1920
     CAACACTTAG GTCAGCCATT CGCTGCGCCA AGACAACACA TGCTCAATTT CGGTAATGCA      1980
     CCGTTCGCCG CACCCCGACA AAATTATCAA CAATTGCAAC AATATAATGC CCCACCCCGT      2040
     CCTTTCGCGG CCAAACCGCA ACCAAGACCA GAACCAATGG ACGTGGACCG CAGCATACAG      2100
     ACGAGAAATA TCAATTATAT GAACCGACCA CATTTTGACG CCGGCAAACG ACCGAGTGGA      2160
     CAGACTACAG ACATAAACAA AAGACAAAGA AATTATAATA TCCAAACTAG GGGCATGGGA      2220
     CATCCAAGTG CCAAAATAGC TGGGCCCAGT TCAAGCATGA CAGACTATCA ACGGTCGATG      2280
     CAAGAATATG AAACCCAGAA CGACATAAAC GGCACCATGG ACGAATATTG CAACGAACTG      2340
     ACGGACTACT TAAATGACGA TGAGCAACAA CAACAGATGC ATTTTTTAGA TTAGAAGACT      2400
     CCTCACTGCC ATACTTCGAA TGTAGAGTGA GGAGTGGAAA GGTTCTAAAG GTGTTGATCG      2460
     ACACGGGCTC CAACAAAAAT TATATTCAGC CAAAACTGGT GTCGAATGCA ATACCAAATT      2520
     ACAAGCCTTT CATAGCTGCC ACTCCGGGTG GCGATATAAA AATAACACAC TACAAAAGAG      2580
     CAGACCTTTT TGACTGGGAA ATAAAATTTT TCCTCTTAAC ATCTCTTACG ACATTCGACG      2640
     CAATTCTCGG CAAAGACACC CTGAAAGAAA TGGGAGCACA GATAGATTTA GGAAATTTGA      2700
     CCATGACACT AGGAAATGGG AAGAGGATTG CTATCAAGGA ACGAAAGTTC GAGGCTGTTA      2760
     ATACAATCAG CCCCAGAATA GATCACTTGG GACAAAAACA AAAAGAAAAA CTGAATCGGG      2820
     TAATTAATAA TTATCCAGGT CTCTTCGCAG ACCCAAACCA AAAACTGACC TTCACAACAA      2880
     ATGTAAAGGC AGCAATTCGA ACCACATCGG ATACACCTGT GTATTCGAAG TTTTATCAGT      2940
     ACCCGATGTC CCTAAAAGAT GAAGTCAATA AACAAATAGC GGAGCTTTTG CACGACGGAA      3000
     TAATTCGACC ATCAAGGTCA CCCTACAATT CACCAGTGTG GATTGTGCCA AAAAAACTCG      3060
     ACTCCTCTGG TAAAAAGAAA TACAGAGTCG TGATTGATTA CCGAAAACTC AATATGGTAA      3120
     CAGTAGCAGA TAGGTACCCA ATCCCCGATA TTAACGAGGT TTTAGCCCAA CTTGGTGACA      3180
     ACAAAGTTTT CTCGGTGCTC GATCTTAAAA GTGGGTTTCA CCAGATCCCA CTAAAAGACT      3240
     CCGATATCGA AAAGACCGCC TTTTCCATAA ATCATGGAAA ATACGAGTTC ACTCGACTTC      3300
     CATTCGGTCT GAAAAATGCA CCATCAATAT TCCAACGCGC ACTCGACGAT ATCCTTCATG      3360
     AGCATATTGG CAAAATATGT TTCATCTATA TCGACGATAT CATTATCTTT AGCAAAGATG      3420
     ATGAAACCCA TTACAAAAAC CTGGACATAA TTTTCAAGAC CTTGCAACAA GCCAACATGA      3480
     AATGTCAGTT GGACAAATGC GAGTTTATGA AGAGGAAGGT AGAATTCCTG GGATTCGTCG      3540
     TGTCCGACAA GGGCATAGAA ACCAATCCAA TCAAAGTACA GGCAATTTCA GACTTCCCAA      3600
     TTCCAAAAAC ACTCAAAGAA CTGAGATCAT TCTTGGGATT ATCTGGATAT TACAGGAGAT      3660
     TTATACCCAA CTACGCTAAG TTGGCAAAAC CACTTAGCTC GCTTTTGAGA GGGGAGGATG      3720
     GACGAATTTC CAAGACATTA TCATCAAAAA AATCCGTCTC CCTTAATAAC GAAGCAATGG      3780
     AAGCCTTCAA GAAATTGAAG AGCAGTTTGA TTTCCCCAGA CGTGATACTC CACTACCCAG      3840
     ATTTTAAAAA AGAATTTCAC CTAACAACGG ACGCTTCCAA TTTCGCAGTG GGTGCTGTTC      3900
     TTTCACAAGA AAACAGACCC ATTTCATTCT TATCGAGAAC ACTCTCGAAG GCAGAGGAAA      3960
     ACTACGCCAC AAATGAGAAA GAAATGCTAG CCATTATCTG GGCTCTAAAA AAGCTCAAAA      4020
     CTTACCTTTA CGGTAAAGCA AAGGTGAAAA TCTTTACCGA CCATCAGCCT CTGACCCATT      4080
     CCCTCAGCAG CTGGAATGGA AATGCGAGAA TCAAAAGATG GAAGTCATAC CTCGAGGAAT      4140
     ACGACTATGA AATTCTCTAT AAACCAGGCA AAGAAAACGC TGTGGCCGAC GCTCTGTCCA      4200
     GAGGACCAAC AGCCGCGCAA ATAAACTCGG TAACCTCAAC AATGCACAGC TCTGACAGTT      4260
     CGAGCCATGG GTTGATACCT AGCGTTGAAG CTCCAATAAA TGCATTTAAA AATCAAATTT      4320
     TCTTCCGGAA AGCAGAGTCG GAGAATTACT CAGTTAGCAT CCCATTCCCG ACATTCCATA      4380
     GGCATTTAGT GGACCGTAAA TTGTTCACAC CTGATAGCCT CTTGTCAGAT TTGAAGAAAT      4440
     ATCTTAACCC ATCCGTGATA AACGGAATTT TCACATCCCA GGATGTAATG GGGAAAATAC      4500
     AAATCCTCTA CCCCATCCAC TTTAAGGGTT TCAAGATTAG ATTCACTCAG ACTGAGGTCA      4560
     AAGACCTTGT TACCGAAGCC GAACAGGAGG AAGAAATACT TAGGACACAC AACAGAGCAC      4620
     ACAGAAACGC TTTGGAAAAT AAAGCTCAGC TGTCCGAAAG AGTGTACTTT CCTAAAATGA      4680
     GGAAAAAAGT TTCAGCTATC GTGAGTCAGT GTTTGGTGTG TAAGACCTCT AAATATGACA      4740
     GACACCCCAC ACATCCGGAA ATCAGAGAAA CTCCCTTGCC AGAATACCCC GGACAAATTA      4800
     TTCATGTCGA CATCTATTCG ACAGAACGAT ATCTGGTGCT CACAGCAATC GACAAATTCT      4860
     CCAAGCTGGC TCTGGGAAGA GTCATTAAGT CGAAAGCTAT AGAGGACATT AGAAAACCCT      4920
     TAAGAGATAT CGTATTCTAT TATGGAGTGC CCAAACTAAT AGTAATGGAC AACGAAAAGT      4980
     CCCTCAACTC AGCTTCTATC AAATTCATGT TGGCAGACCA GCTGGGCATT GAGCTCTATA      5040
     AAGCACCTCC GTACAAGAGT ACGGTAAACG GACAGATAGA AAGATTTCAC TCCACACTCT      5100
     CTGAAATAAT GAGATGCTTG AAAGGAGATG GGACACATAG AAGCTTCGAA GAACTTCTTG      5160
     ATAGAGCTAT CTATGAATAC AACTTCACTG TCCATTCGGT CACAAAAAAA CGACCCCTAG      5220
     AGGTGTTCTT CGGTAGGGGA ACTACCGCGT CACCAGAACA GTATGAACAA GCTAGACTGG      5280
     ACAATGTAGA CCGTCTTAGA AAGAAACAGG AAACTGACAT TAAAAATTAC AACCGGACAA      5340
     GAAAGCCCAT AAAGACCTAC ATCAAGGGCC AAGAAATTTT CGTTAGGGTT AATACAAGAT      5400
     TAGGATCTAA GCTATCAAAC AGATTTAGAA AAGAAATAGT TAAGCAAGAT AGGAATACTA      5460
     CAATACTAAC AGAGTCAGGA AAAATAGTGC ACAAAAGTAA CATCAGATCA TGATTACTTT      5520
     CAGGATACTT ACTGTGGTCG CATTGACAAA TGGACTCATT GAAATAACTA ACTACACCGA      5580
     CGCACAGACT GTGACGATTT ACAACGGGAT AGGACAGATA CAGATAGGAA CAACGAGAAT      5640
     TGTCCATATC ATCGACTTGG ACCACGTACA ACTGACCATA GGAAAACTAA CAGACTACAT      5700
     CGATCAGGAC TTCAACGACG ACAAGTCATA TCACTTACTG AACTACGAAC TGACACAGAC      5760
     GAAGAACTTG CTCGACACTG TGATCCTGGC AAAGACAAGG AAAACTAGAT CGATAAATCT      5820
     TATAGGGACG GCCTGGAAGT ATGTTGCCGG TAGCCCGGAT CACGATGACC TTGTAGCTCT      5880
     GACCGACGGG ATAAACGACT TGACGGATAA CAACAATAGA CAGGTAATAA TCAATAGACA      5940
     GCTGGAAAAT AGAATGAACC TACTAACCGA CGTGACCACG AAAATACAAA ACTCAATCAG      6000
     AAAAGATTCT ACCTTAAAGG ATGAGCTGGC CATAAGACTA CAGAACCAGA TTAGGCTCGT      6060
     AAAAGAAGAG ATAGTCAACA TTAAATTTGC CATTCAATGG GCAAGGCTGG GTGTTATGAA      6120
     CACATTCCTG CTAAACGAGT TCGAGTTGAA AGAGATCGAC AGCCTACTCA AAATCAATAA      6180
     TATGCCGACT TCTGCCTTAA CGGTCGAAGA AATGTTAAAA CTCTCAGACG TTTCCGTTTT      6240
     ACATAACGGA ACTACAATTT TGTATGTTAT CAAAATCCCA ATTTTAAAAC CAACTAATTT      6300
     CCTAAATTAT CAAATAAGGC CAGTAAAGAA AAACAATAAT ATCATTAATT TACCAGCTAA      6360
     AGAAATTTTT AAATTTAAAG ACGAAATGTA CGGAATTAAT GCACAGTGAA CTGGAGGGAC      6420
     ATCGAGAGAC GATTGAGCGG CACTTACTTG ATAACGTTCC TGAACGAGAC CCTGAAAATC      6480
     AACGGCCGAG AGTTCAGTAA CAATGAAGTG GCTTCAACAA AACCTGCGCC ACCACTGATA      6540
     CAGCTGACTC CATACGAGGT GGGACGCCTT CGAATTCTCT CGCTAGAAGT ACTCGAGCAA      6600
     CTTCATCTGA ATAACACATC TGAGTTACGC AAACTTCGAA CGCACTCAAC AATAAACAGA      6660
     GTGTTCGGCG CAACAATACT AATGATGATT GCTGTCCTGA TCTTCGTGAC AAATCGGTGC      6720
     TGCCGGAGAG GAAAAAAGGT GGTCCTTCAA ATCGACGCAC CTGGCATTCA AAACATTGAC      6780
     GCGGTGCCCA AACCACCACA GATCACCCCA CCAACAATGC GTTTCAACAA CATCCCGTTT      6840
     TTTTGATGAC CGCTTGAGGA CAAGCGTCGA TTAAGAGGGG AGGAGTTATT GCCCTATAAG      6900
     TTATCGTCCC ACATCTTATA TTTCAACATC ATTTCTGGGT AAACACAAGT GCCCAAAATG      6960
     CTGACCAAAG GTCTGCATTC TTTCCGCTGT CAACGACCAG CTAAAAGTGC GATCATCTGC      7020
     ACTTCTCCGC CGCGTAGCCG CTGACGACCA CTGATTCGCT GCCGACGCCT GCTGCGACGC      7080
     TGCCGACGCC CACACTTGAT TGCTAGGGAC TTAGGGAAAT ATTTTGTATC TTAGCTTTAG      7140
     TTTCAAATGA ACAATTACAA TAAACGGTCG CTTGCGATCT ACAAAATAAA AATCAATAAA      7200
     CTGTAATTAT TTACTTATAC                                                  7220
//
ID   DPSEMINIME    standard; DNA; INV; 4622 BP.
XX
AC   AC131959;
XX
DR   FLYBASE; FBgnnnnnnnn; Dpse\mini-me.
XX
FT   source          AC131959:30620..35241
FT   SO_feature      CDS ; SO:0000316:2480..3364
FT   SO_feature      inverted_repeat ; SO:0000294:252.. 693
FT   SO_feature      inverted_repeat ; SO:0000294:4189..4622
FT   SO_feature      dinucleotide_repeat_microsatellite_feature ; SO:0000290:
FT                   100..111
FT                   /remark="repeat=TA"
FT   SO_feature      tetranucleotide_repeat_microsatellite_feature ; SO:0000641:
FT                   150..197
FT                   /remark="repeat=GTCY"
FT   SO_feature      region ; SO:0000001:117..149
FT                   /remark="Wilder and Hollocher core sequence"
XX
CC   Sequence & annotation from Steve Schaeffer, 2 April 2004.
XX
SQ   Sequence 4622 BP; 1198 A; 1081 C; 895 G; 1448 T; 0 other;
     TTATACCCGA TACTCAAAAT GAGTATTGGG GTATATTAGA TTTGTGGTAA AAGTGGATGT        60
     GTGTAACGTC CAGAAGGAAT CGTTTCCGAC CCCATAAAGT ATATATATAT ATTCTTGATC       120
     AGCATCAATA GCCGAGTCGA TTGAGCCATG TCTGTCTGTC CGTCTGTCCG TCCGTCCGTC       180
     TGTCCGTCTG TCCGTCCCCT TCAGCGCCTA ATGCTCAAAG ACTATAAGAG CTAGAGCAAC       240
     GATGTTTTGG ATCCAGACTT ATGTGATATG TCACTGCTAC AAAAATATTT CAAAACTTTG       300
     CCCCGCCCAC TTCCGCCCCC ACAAAGTGCG AAAATCTGTG GCATCCACAA TTTCGACGAT       360
     ACGAGAAAAC TAAAAACGCA GAATCGTAGA GAATGACCAT ATCTTTTAGA CTGCAGAATC       420
     CGAATTGGAT CGTATTATTA TTATAGCCAG CATCACGAAA ACAATTTAAT TTTTTCTCGC       480
     CCTGTCTCTC TCTAACACAC ACGTAGCATA GGCGGCTTTG CTTAGAGTAA AACATTAGCG       540
     CCTAGATCTC AGAGACTATA AAAGCCAGAG CAACCAAATT TGGTATCCAC ACTCCTAATA       600
     TATCGGACCG AGACGAGTTT GTTTCAAAAT TTCGCCACAC CCCCTTCCGC CCCCGCAAAG       660
     GATGCAAATC TGGGGATATT CACAAATCTC AGAGACTATT AAAGCTCGAG TAACCAAATT       720
     TAGTATCCGC ACTCCTGTTA GATCTCACTA TTCATTCAAA GCAAAATAAA AGCCGTGGGT       780
     TTAAAGGTGG AGAAATTTAA CTTCTCTTAT GCCAGGGAGA TAGCGTCGTT TAAGATAAGC       840
     ATCTCCCCAA CTCAATTTGA CACCATTTGC TCCACCAAAT TTTGGCAGGA GCATTTGGTG       900
     GTGAAGGAGT TTAAGGCTAA GAAGAAGAAT AGGCCCCCCA TATCGCTTCC AAATCTTTCC       960
     AGCGTGCCAC CCTCAACCTC AACTTCCTCT TCCTCAACTT CCCGTCTTGC TCCAACCTTT      1020
     CCAAAAAACT AACTTCTCTT TTAGTAACCT ATCAGAATGT AAGAGGCTTG CGTAGTAAGC      1080
     TCAGCATTCT TTTCCGGGAT AGTGTTGCAT TTGCTTCCCA CGTTATTGTG TTTACTGAAA      1140
     CCTGGTTAAA GCCGGACATT CTTAGTTCCG AGGTTTTGGC AGGTCGGTAC ACAACTTTTA      1200
     GAAAGGACCG TTCGTCTCGA CGTGCAGGAG GGGTTCTAAT TGCAGTGGAC TCTTACTTCA      1260
     CGTCAGAACA CTTCACAGTC CAAGTTCAAC AGGAACTGGA ATTCCTTTGT GTAAAACTGA      1320
     TTCTTCCCGC TTTCGCTATA TTCATTACTT GCTCGTATAT CCCACCTTCT TCGGATATTT      1380
     CAATTTATGA GCAGCACTTG TCCGCTTTAA CCGCTGTTGC TTCCTCGCTA TCTGATAAAG      1440
     ATCGTATGAT AGTTCTTGGT GACTTCAACT TGCCAGGAAC TGTTTGGTCT TCGGTAAACG      1500
     AGTCTAGTAT CCTAGTGCCC ATGTCACGAC ATGACTTTGT TGACGGCTTG CTTGACCTGT      1560
     CCCTGTCTCA AGTCAATCAT GTGAAAAATT CCTTGGGTCG ATTGCTTGAT CTATGCTTTG      1620
     TATCGGATCC GACCATAGTG TTGTTAACCC GAGCCCTTCC GCTCACTATA CCTGAAGACG      1680
     CCTACCACCC TACTTTCGAA GTGTCGCTAG ACATATGACC AACTGTATTG GATCGGTCGA      1740
     GTAGACTACC TGAACGTGTC CGCTGCTTTC GTAAAGCCGA GTTTGCGAAG CTTAATACCC      1800
     TAATTAGGGA TTTTGATTGG TCCGCTTTGT ACTTGTGCAC TGATGTCACA AAAGGCACAA      1860
     ATATTTTTTA CAATGCTCTT GGCACATTTT TTGATTCTTG TGTCCCGCTT TCTTGTCCGA      1920
     TTAGATCTGG AAAACCCCCT TGGTTTACCA AAGAGTTATC CAGTCTAAAA AACTTAAAAT      1980
     CAAGACTTTA TAACAAATTT CAAGAAGTGG GTTCTCCTAC TTCTCATTCT CGTTATGTAA      2040
     TAGCTCGGTC AAACTTTTCA GTTCTTAATG CTCAATGCTA TAAGAACTAC CTATCTCGTT      2100
     GCAGGATACG TTTTTCTCAG GACCCTAAAC AGTTTTACTG CTTCGTAAAC AGTAAGCGTA      2160
     GAACGTCCGC ACACCCATCC TCGCTATCAT TTTGTAATAC GTCGGCAAAT AATGATCAGG      2220
     TAATTGCCGA TCTTTTTGCC CAGTTTTTCC AAACCACCTA TTCTGAGGAA CGCTACTCTG      2280
     GTCAACCGTA CCCATACGGA TTACCGAGGT CGAACGGCAT TTTCAGTCCC TTGTTAAATG      2340
     AGTATTCCCT ACTTCAAGAT CTTCGACTAG TTAAGCCGGT GTTTTCACCG GGTCCAGACG      2400
     GGGTTCCAGG TTGTGTACTC AGGTACTGCG CCGAGGCTCT GTGTGGACCA TTGCTTAAAC      2460
     TATTCACCAT GTCCATTGAT TCCTCTTGCT TCCCCCCAAT CTGGAGGAAT CGTTTATAAT      2520
     TCCTCTCCAT AAAAAAGGTA GTAAGTCTGA TGCAAAAAAT TATAGAGGTA TAGCAAAGTT      2580
     ATCCGCTATT CCCAAATTGT TTGAGAAGGT TTTAACTCCG CACTTGCAAC ATCTCTGCAA      2640
     GTCACTTATA TCTCCAACTC AGCATGGATT TATAAGGCGG CGATCAACCA CCACGAACTT      2700
     GTTAGAGTTT ACCTCTTTCA TTATTAAAGG CTTTCAAGGT AACTTACAGA CGGATGTTAT      2760
     TTACACCGAC TTTAGTAAAG CATTCGACTC TGTAAACCAT TCCCTTTTAG CACATAAACT      2820
     TGACCTTTTA GGGTTTCCGC CCAACCTCCT GAGATGGATT TCTAGCTATC TTTGTTCTAG      2880
     GTCTCAAAGA GTCCTCTTCA AAAACTCCCT CTCTTTACCA GTAAAGGTTT CTTCGGGAGT      2940
     ACCACAGGGC ATCCATCTAG GCCCCTTACT CTTCACACTC TTTATTAATG ACTTGCCTTC      3000
     AGTAATAACA TACTCTCGAG TACTTATGTA TGCGGATGAT GTTAAACTCT GTGTCCAGTA      3060
     CAAGGACATT TCATTTCATT CTCGCTTGCA ATCCGATCTC AATAGCTTTC AGTCATGGTG      3120
     TTGTGCAAAC TTGTTACACC TTAATGCCTC GAAATGCAAA GTTATGACAT TTCATCGTTC      3180
     TAGCCCTTTG TTGGCTCCCT ACACCCTATT TGGTGGTTCT CTTGAGAGAA TTACCCTGGT      3240
     GGATGATCTG GGTGTTATGT TAGATCCCAA GTTAAAGTTT TCCGAACACA TTTCTACCAT      3300
     GGTAAATAAG GCCATGGGCG TGCTTGGGTT TATAAAGAGG TGGTCAAAGC CTCCCATCCT      3360
     TAGTTAACCG TACAAAAATC CGACGTGTTG AGTTGCATAA ACTTCACGAT TCCTATTAGA      3420
     CTGACTAGAA ATTTTATACC GTTGTTTCTT CCACTTTGTA CATCGAATTA TTGCTTGCAA      3480
     GCACCGTTTA GGGTCTTATG CTCGGATTAT AATTCCCTCT ACCATATTAT ATCCTCCACT      3540
     AATTCTCTTC CTCTTATTAA ATTACTAATC CTTACACACC TTTCTAGTAA TTAGTAATTG      3600
     TAGTGGTACT TGTATTTTGT ATTTTATTGC ATGCTTAATT TCTTAATAAG TTTAGTGCTA      3660
     ATTTTCCTCG AATGTTAGTC TAATATCTAT CTTTCTTGCA TGCTCGCGTT TGGTTCGGCT      3720
     ACGCACCGCG CGTCATGCGG CAGCGCCCCT CGGTCGGTTG GGCGGGAGGA GGGCTGCGTT      3780
     TTGCCTGGGA TCCGCGCGTA ACAGCCTTCT GCTGGTGTCA CACGGGCCAC TTGACGGTGC      3840
     AGTAATTGCA TCGCCTCTTG ATAGATGCAG TCATTGCATG TCAACGTCCA AAAAACGTAT      3900
     ATCTCAAAAT TTCGCCCCAC CCCCTTCCGC CCACACAAAG GACGAAAATC TGTTGCATCC      3960
     ACAGTATTGC AGATTCGAGA AAACTAAAAA CGCAGAATCA TAGATAACGA CCATATCTAT      4020
     CAGATTGCTG AATCTGGATC AGATCAGATC ACTTTTATAG CCAGAAGGAA CAAATCAATT      4080
     TGCAGTGGCT ACGCTGCGCC CGACGTCACG CTCAGACTGA TTTTCTGTCT CTCTCGCACG      4140
     CACTCTTTGT CGTGTCGTTT AATATTAGCG GCGTCTGCCT CTGAGATTTC TGAGATTTTT      4200
     GAATATACCC AGATTTTCGT CCTTTGCGGG GGCGGAAGGG GGTGTGGCGA AATTTTAAAA      4260
     CAAACTCGTC TCGGTCCGAT ATATTAGGAG TGTGGATACC AAATTTGGTT GCTTTTATAG      4320
     TCTCTGAGAT ATAGGCGCTA GTGCTTTACT CTAAGCAAAG CCGCCTATGC TACGTGTGTG      4380
     TTAGAGAGAG ACAGGGCGAA AAAAAATAAA ATTGTTTTCT TGATGCTGGC TAATATAATA      4440
     ATACGATCCA ATTCAGATTC TGCAGTCTAA AAGATATAGT CATTCTCTAC GATTCTGCGT      4500
     TTTTGGTTTT CTCGTATCTT TAAAATTGTG GATGCCACAG ATTTTCGCCC TTTTTGGGGG      4560
     CGGAAGTGGG CGGGGCAATG TTTTGAAATA TTTTTGTAGC AGTGACATAA CACAGTAGTC      4620
     TG                                                                     4622
//
ID   Q    standard; DNA; INV; 759 BP.
XX
AC   AE002612;
XX
DR   FLYBASE; FBgn0063900; Q-element.
XX
FT   source          complement(AE002612:6924-6166)
XX
CC   Coordinates from Berezikov et al. 2000.
XX
SQ   Sequence 759 BP; 231 A; 168 C; 116 G; 244 T; 0 other;
     CTGAAACTGC TCACCTTATC TCTGGAATCT TCACAATTCC CTCATATATG GAATGAGTCC        60
     TTTGTGATTC CTCTTCATAA AAAAGGTAGC AAACTGGATG CAAGCAATTA CAGAGGAATC       120
     TCTAAATTGT CGGCTATCCC AAAACTTTTT GAAAATGTTA TCACTCTTCA TTTGCAGCAC       180
     CTTTGTAGAT CAATCATATC ACCGTGTCAA CACGGTTTTA TGAAACGCAG ATCAACAACC       240
     ACTAACCTCT TGGAGCTAAC TTCTTTCGTA ATACAGGGAT TCAAAAATAA TCTTCAAACA       300
     GATGTCATCT ATACTGATTT TAGTAAAGCA TTTGACTCTG TTAATCATTA CCTTCTAATA       360
     AGAAAACTTG ATCTTTTAGG TTTCCCTATT GATCTTCTAA ATGGGATTTC AAGCTGTCTG       420
     AATGGCAGGA CACAACAAGT CCTCTTTAAA AATTCTTTAT CTCGTATTTT ACGAGTCACA       480
     TCCGGTGTCC CACAAGGGAG CCATCTTGGT CCGCTTCTTT TTACCTTATT TATTAAAGAC       540
     CTCCCATTAA TAATAAAACA TTCGCGTGTA CTTATGTACG CAGACGATGT TAAATTATAT       600
     CTCCAGTACA AGGACACTTC GTGCCATTTA GACTTACAAT CCGATCTAGA TCGATTTCAA       660
     ATATGGCTCC AAGTGTAAAG TTATGACCTT TTGTCGTGCC AACCCAATAC GCATGACTTA       720
     CACTCTAAGT GAGTGCTCCT TGAACAGAAT AACACGAGT                              759
//
ID   BUT1    standard; DNA; INV; 769 BP.
XX
AC   AF162798;
XX
DR   FLYBASE; FBgn0063576; Dbuz\BuT1.
XX
FT   source          AF162798:600..1368
XX
SQ   Sequence 769 BP; 266 A; 117 C; 148 G; 238 T; 0 other;
     CAGTGATGCC AACTTGTTCT TTTTCCGGAC AGATCTGTCC TGTTTTTAAG CGCTTTGTCC        60
     GGAAAATATA TCAAACATCC CCTATCCGGA AATCTGTCCT TTTTTGTGAA TGCGAATCGT       120
     GTAAATATGA ACAGTTGGTT GGTTGTTTCC CCAGTTGGTT GGTTGTTTTC CCAGTTGATC       180
     GGTTGTTGAT GCCACAGAAT TTTATTAAAT AATATTGCAG AGCAGTTTAA CAGAACTTTG       240
     GCATAAAATA TACTAAATTG TGTACCGATA TTTTGTTAAG AACAGCGCCA AAATGAGTAT       300
     AACAGTGATA AATTGATAGT GTAGGAGGTT TATATGTATT ATCGATATCG TTTCTTATCT       360
     AAAGTTGAAT TTGAAAAGAG TGATAAAATG CCCAAGGAGA TATATAAACA AATATTTTGG       420
     GATTGCTGGC TACAGCAGCC AGATTTCAAG CCGTGGATAG CCCGGGATGA GAACGACAAT       480
     AATAAGGGGT ACTGTAAATG CAGTATAAAT TGCAAAATTG ACCAAATTCG CGCACATATG       540
     GCTACAAAAA AACATATGAA AAACGCATCG TGTTTTCCCA AAAAAATAAA ATATGTTGGA       600
     TCCATGGCGA CGTACGTGGC CAGGGAAGAG GAAAAATATA ATAAAAAAGA AAAAAAATAC       660
     AAATTTAGAA AAAAAAAAAA TGTTTTCTGT CCTTTTTTCT TAGATTTTCT GCCTTTTTTC       720
     CGTATTTTAC GGACAGTTTT GCCTAAAAAA AAAAAAAAAT GGCATCACT                   769
//
ID   BUT2    standard; DNA; INV; 2775 BP.
XX
AC   AF368884;
XX
DR   FLYBASE; FBgn0063575; Dbuz\BuT2.
XX
FT   source          AF368884:458..3232
XX
SQ   Sequence 2775 BP; 866 A; 514 C; 469 G; 926 T; 0 other;
     CAGTGCTGCC AACAATTTGT TGCATGGACA CGCTAGATCA GCCTTTGAAA AAAGCTAGAA        60
     ATAGCTAGAA ATATTTCTTC ATAGCTAAAA AAAAACGTAA AAAAAAACGT TAGATTAAAA       120
     TTTTTTTTTT CCGGTTTATT TCAATATTTT ATAAGAATTC GTCAATCACT TCATCTTCAT       180
     CGTTTTGATT TGTGTAGGTT TCATTGGTAC CTATCTTTCT TAAACATGCT GCTGGTAATT       240
     TGTAATCGTG GCAACATTTT TTTTGGAGGC GTAGTCCGTA TCTACAAATA TAAAATTAAA       300
     TGTAAATAAT AATTTTATAA AATATTAACA GAAAAATACC TTATATGTAA AATGGCGTTC       360
     AAAGTTCTAT TAGCCATACT ATTTCTTAGC TTTGTTTTTA TTATGTTCAT TTGACTAAAA       420
     ACCCTTTCTA CCTCTGCGTT CGACCAAGGC AACGATAAAA GGTTTAGTGC AAATGATGCC       480
     AGTGCCGAAA ACCGTTTCGT CCCTGCCCCA TCTCGATATC TTAACACTTC GGCCCAAAAG       540
     GGTATTGTCT CGTCTGTATT GCACCACTTA ATTAGGTGGA TGCTCGCGTA CTGCGTCAAA       600
     ATGTCCTCAA TATCGGTGGA TTCCACCTTG AAATGCACGA GAATATTCAC AATGTCAGCT       660
     TTTTGTGCAC ATAGTATTTT TTCTACAGAA AACAAGTTAA CTTGCTGAAG GATTTCAAAA       720
     TTATCAGGCA ACCTGAAACA ATTTATAATT TAATAAAACA AAATATCACA ACTTATTCAT       780
     AATTACATAC CTCTGTTTTA ACTCGTTGAT TAATGCTACT ATAAAATTGG AACATTTCAA       840
     ACGAATTTCT GTCTCTATTT CATTCGAGAT TTTTTTTTCT TTAAGCTTTG TTTCAAATGC       900
     ATATCCCAAA TAGCAGTCAT ACTTAACAAA TTGTTCGAAG TCTTCTTTTA AAATATCAAT       960
     ATCGACATCA GGGGGAATAA TTTTACTTTT AAATGAATTT ATCGTATATA CGAGATCACT      1020
     TAATAGTTTG CTTGAGTCTC CAGTGCTTGT TTGAAAAATT TTATTGATGT GCTGCATTTG      1080
     GGCTAGCACT GGTTGCAAGA ACAGAAGATA CAAATGATTA ACGTCATCAC TATAAAGTTT      1140
     TTGCAACGTC TGCGCCATAA GACATTTTTC ATTTGTTGCA GCAATGGTGA AGTGAAGCTT      1200
     CAGTTCAATC CACTGCTGTA GAATTCGGCT AACTGCTTTT TCAATGGACA GCCACCTTGT      1260
     CTCGCATACT CGAGGTATTT TAAGAGGATC CTAAAGAAAT ACATGTTATT CATATACATT      1320
     ATATATATAC ATATCTATAT AAACAAACAT GTACAAAACA CAAACTACTT ACACACGCAT      1380
     GTTAAATAGA ACGAAACGCA CACAATTGTT AATGTTGAAA AATGCAAAAA GATGTCTCTT      1440
     TCACCTGGTC GGAATTTATA ATTTGATATA TTTTTTTGTA CTCAGTTTGT CTTTTCGTAC      1500
     TGCAGGAAAA CCAATAATAT GTTTGAGCAA CAATGTACTC TAAGACCTCG GGAACAGTTT      1560
     TGCAGGCATT ACTCACAGCC AATTGCAGTG AATGGCATAC ACATTTGATT AAAACTAAAG      1620
     CCGGAACCAT TTGTTTTAAC TCCGTGTAAA CACTTTGTTT GGAACCAACC ATAACACTTG      1680
     CGTTGTCCGT GCCGATTCCA ATCAAATTCG CAAGCTTTAA GTTAAAGTTA TTTTGTTCCT      1740
     CGCAGAGGCT TTTCACTATC GTTTTTGAGT CGCCTGCCTC GAGCGGGACT ATGGATAAAA      1800
     ATGTGGAGAC CATAACGCTC CGTTTTGAGC TAAAATAGTT TATGGCAACA CCTATACAGA      1860
     AAGTAATTAT GATTAAGATG GTGTTTCAGA ATGATTAGAA TTATTACTTA CCAAGAGTCT      1920
     TGTACACACT TATATCGGTA CTCTCATCAA TCAATAAGCT ATACTTCGCA TCACCGGTGT      1980
     CCTCCTTCAG TAGCTCTATG AAGTGAGGAG CTAGAACGTT TTTTATTATG GTTGTGCACT      2040
     TTGTCCTATG GAGCTTTAAT TGAGTGGCAT CCTGAAACTT TTCTTTGCAC AGCAATCCTA      2100
     AATGGCCCAC AGGTTTGATG GAAGAATGTG TTGCAATATA TAAACACAAT CCCGCTTCTT      2160
     GTTCGCAAGT TTTCAATGCG ATTGAAGAAA CAAATTTAAT TTTATTAGGC TGTGCAAAAG      2220
     CCGCTGAAGT TGCCTTGTGC TTAGCAGTCT TGGCATGTGC GTGCAAATCT GAAAGTTTAG      2280
     CATTAATGCT AGATTTGCAG TATTTGCAAT AGCATTTGCC CTCATCAGCT GCATCTACAC      2340
     TTAACCAATC TTTAAATGCA GGATCTTGCA TCCATACTGT GCGCGGTTTT TGTTTATAAA      2400
     TTTTCGGCAT TGTACTTGTA AACTTGTAAG CTACGCTCTA CGCTTTAAAA CTTGTGAAAT      2460
     ACCCTCTTGG TGATGGCATA AAACACGATT CGGTAGACTT CACAGACATC GATAAGATTG      2520
     AATGCTCGTC TGGCTTATCG ATGTTTGTTG TCATTCATAT GAAAAAATAC TATACGTATG      2580
     AAAATGTGGC ATCATAGAGC AGAGAGCACA GATAAAATAC ACCAAGTTAC CAGATGTTGC      2640
     AAAAATATGA AGTAAAGCTA ATTTTTCATG AAAAATAGCT ATAATTCCCG CTAGCCGCTA      2700
     TTTCACAATT TATCCCGCAT TTCCTTGTTG CAACCCACTA GATCTAGTGG GAAAATAGCT      2760
     AAATTGGCAG CAGTG                                                       2775
//
ID   BUT3    standard; DNA; INV; 795 BP.
XX
AC   AF368870;
XX
DR   FLYBASE; FBgn0063575; Dbuz\BuT3.
XX
FT   source          AF368870:568..1362
XX
SQ   Sequence 795 BP; 263 A; 130 C; 145 G; 257 T; 0 other;
     TAGTGCTGGC AAACTATCGA TAGCACTATC GATATATCGA ATTTTCACAT TTTTGCGCCG        60
     CCATCGATAT TTTTTATCCA CTATCGATAG GGATCGAAAA TAACGCTCGC AGTTTGACAC       120
     ATCACTCGTT TTGGCGATTT GGTTATACGA AATTTATTAA AATATAATCC GGTATAAGCT       180
     TTTTGGTTAG TGGTATAGAC GGTGGTATTG GCATGGACAA ATTTTTGATC GATAATAACA       240
     AGGGGAAGTA TTATTTTCCA TTTCATTGTT AGAACCGTAA AACTAATTTT ATAAGTATGT       300
     ATTAACATAG ATGGCGACAT TTGCAATGTG GATGTTGAAA ATACGGTGGC CAAAAAACCA       360
     CGCATTGGCA AATCTAAAGT TTGCCAATTC TTTACAAGAA TTAATGATGG TAAATTGGGA       420
     AAGTGTCGTT CATGTGATAA AACATACAAG ACAAGTGGAA ATACATCTAA TTTATTCGAC       480
     CACCTCAAAC GTGTACATCC AACACTGCAA ATAAATGAAT TGCCAATTGT TAACAAAATC       540
     GAGAGCTACG TAAGCGCAAC ATGTGATTCT TCAAACAAGC GTAAAAAGGA GCTTGATATA       600
     GCGCTTATGG AGTACATTTC ATCAGACATG CAACCATTCT CCGTTGTTAT AATTTGCCAT       660
     TTTGTTATTT TTCGTTATTT TCAAATTTAA ATGTAAATAA AGACGGTTTT AGCGATAGTA       720
     TCGATAGTAT CGAATTTTTT GCTTAAAACA TCGAAAATAT CGAATGGCGC CACTATCGAT       780
     AGTTTGCCAG CTCTA                                                        795
//
ID   BUT4    standard; DNA; INV; 1447 BP.
XX
AC   AF368868;
XX
DR   FLYBASE; FBgn0063573; Dbuz\BuT4.
XX
FT   source          AF368868:207..1653
XX
SQ   Sequence 1447 BP; 396 A; 312 C; 269 G; 470 T; 0 other;
     CTATCGATAG CACTATCGAT AAATCGAATT TTCACATTTT TGCGCCGCCA TCGATATTTT        60
     TATCCACTAT CGATAGGGAT CGAAAATAAC GCTCGCAGTT TGACACATCA CTCGTTTTGG       120
     CGATTTGGTT ATACCACTAA CCATACAACA CATAGACTGG ACAACTCGAA CAAACTTTTT       180
     TCACGAACCT GATTTTGATA TCCCGGCCTA GTCATCTTCG TATTTGCTCG GCTCTTTAAT       240
     TTACTGTTCG GGCAGCGAAA ATATAGCAGT TGATATTCAG TTCGCTGCCA GCGCTCGAAC       300
     GAAATGATTC TATTCTCATA TGAAGCACCG CTGCGTGCTA TTCTTTCTTT ACTCACTCTC       360
     TCACTCACTC TCTCTATGCC TCTCATATAT ACATACATAT ATGTATGTAA GTCTGTGTGT       420
     GTATGCAGGC ACAAGCCAGC AGCTCACAAA AATTGAAATT TGTCCGCGAG TCGCGATTCG       480
     CGACGATCAC ATCTTCGATT CTGAATAAGA GTATGCCGAA CTCTTAAAAA GGTTTGCCAT       540
     GCTCATGCAA AATTTTAGTG TTTTCGTGAT TATTTTTTTA AGGGTATGAA AGCGTGATGT       600
     ACATAAGCAT TGCTTTTTCG CGATGAGCAT GCACACACAC ACATTTACCA TATCTTGCTA       660
     CATGTATGAG CATTTATGTG ACTGTGAGCG AAACTATTGC TGCCTGTGGC AATTGTAGGG       720
     CCCAACATTT GCAGTATGTT TTTCTTGTGG ACCATGGCAT TAGAATTGTG AGAACGGTCT       780
     TAGATTTGTT CGACCTTCTA TGGCGATTTG TGTTGTATGG TTAGTGGTAG TAGGCTATAG       840
     TGCTGGGAAA AAGATCGATC TAAAAACGAT ACATCTATGT TTTGTTAGAT ATCGAAAATA       900
     TCGATACTGC TAACTTCGAT ACTCGATATA TCGCCATCTG TAGACTAATA TCACTAACCA       960
     TACAACACAT AGATTGGACA ACTGGAACAA ATTAATGTGC ACACTTATTT TTTGACATTA      1020
     GAACCCCATC AACTTCGTAT TTGCTCGGGT TTTTACTTTT CGGGTCGGGA GAGAAAAATT      1080
     GCTGATGACA AAATCATTCC GCTTCGAGCG CTCGACGGTG ACGGTCGATA TTCCAAAAAG      1140
     GCCTGACATG TACCGCTCTT TCCCTTGCTT TCTTTCTCTT TCTGCCCTAT GCTTTTTACT      1200
     CTCTGCTCTC TTCTTACAAA AATATATGTA TGCTAGCACA AACAGCAAGC AGCTCACAAA      1260
     AATTGAAATT TCTTCTCGAC GCGATCCCAT TGGTTCCCTT CTGAGCGAAG GGTATACCGA      1320
     ATTCTTAAAC GGCTTTGCCA TGCTCATGCA AAATGTTAGC GTTTTCATGA TTATTTGTGG      1380
     AAAGGGTATG AAAGTGTTGA TGTACATAAA CAATACTATT TCCCGATGAC CATACACACA      1440
     CACATTT                                                                1447
//
ID   BUT5    standard; DNA; INV; 669 BP.
XX
AC   AY187768;
XX
DR   FLYBASE; FBgn0063572; Dbuz\BuT5.
XX
FT   source          AY187768:1462..2130
XX
SQ   Sequence 669 BP; 253 A; 110 C; 116 G; 190 T; 0 other;
     CACTGTTAAA AGACTCAGTA GGTTACGCAA AGATGTTAAC TAACAGACCC CCCTGTGACG        60
     TCACATGCTC ATAAGCAGCC AAAATAAGTT GTTTTGCAAC GAATTCGAAT AGTAAGAACC       120
     ATAAAAATGA TCAATCCATA CTTTTATTTA CTTAAAATAC AAAAACTTAT TAGATAATGG       180
     AAGAAAGTGT GAGGCCTTCT GGCAGCAGCA ACAGCAGTTC CTAAATGGGT ACTACGTCCG       240
     AAAAAATGGT CAGAAGGCAT GATTTTTTTA ATTTTATGCA TTAGTATTGT TTATAAATGC       300
     CAATATATAT CAATATTCAA ATAGAGTACA TGTTGAAGTC ATATCAGGTA AGCTGCTGCT       360
     CACAGCTGCT TCCATGTCGA AAAGAAAGCC CAAAGACCGA AATAAATTTT ATGTATTAAT       420
     TAAAAACCCC AAAAAGGACT GAGATTATAA GTAGTCAAAC ATAAAGAAAC AGATAATCTG       480
     GTTCAACCAG CCATCAGAAA TCTTGGTAGA AGCTAACAAT GCCGCACCCA AGCTTTGGCC       540
     AACAGATTTC TAATATGATG AATGAATATG ATAGATGTAA TGATGTGGAT TGCTGGGAAA       600
     CGATTAGTAT ATGTTATTAC CACTTACTTT TGTAAAATAA AGTCGTTTAA AATAAAGTTT       660
     AAGTTATAC                                                               669
//
ID   BUT6    standard; DNA; INV; 387 BP.
XX
AC   AY187768;
XX
DR   FLYBASE; ; Dbuz\BuT6.
XX
FT   source          AY187768:420..806
XX
SQ   Sequence 387 BP; 87 A; 89 C; 99 G; 112 T; 0 other;
     CAGTGTTTGA AAAGCAAAGC AAAAACCATG GAAGCTGTCT GCTGTGCTGT GCTGTGCTGT        60
     GCTGTGCTGT GCTGTGCTGT GCTGTTCGGC AGTCGACAGT TTTTGCTCTA GCTGCGCTAC       120
     GACTGTCGCC AGTGAACGCA GTTCGAAGCG CTGCGCTGCT GATCAAGAAT TGTTTTTTGC       180
     TTTTGCTGCG ACTGCGACTG TTGAAAATGC TCGCAGCAAC AGTTCTAGCA TTCTCAAAAC       240
     TGCCGAAGCT GTCGATTCCC GAAGCGCTGT GCTGCTGATC AAGAAATGTT TTTGCTTTTG       300
     CTGCGACTGC GACTGTCGAA AATGCTCGCA GCAACAGTTC TAGCAATAAC AGAACTGCGA       360
     AAACTGTTCG CAGTTTTTTA AACACTG                                           387
//
ID   ISBU1    standard; DNA; INV; 1467 BP.
XX
AC   AF368900;
XX
DR   FLYBASE; FBgn0045754; Dbuz\INE-1.
XX
SY   synonym: ISBu1
XX
FT   source          AF368900:125..1591
XX
SQ   Sequence 1467 BP; 509 A; 282 C; 255 G; 421 T; 0 other;
     CAAGTAAGAA GGCTCTAGTC GAGACGGCTC GACTACGAGA TACCCTGAAC CCTGCAAAAA        60
     AGTGATACTC TTCTTCTTTA CGCACGTATA AGCACGCGCT CTGCTAACCG CGCAGTTGCT       120
     CTTGTATCTT CGAAAATCAA ATAGAAAAGA ATAAATAATA ATAAAAAATA AAGAAATAAT       180
     AAAAAAATAA AAATAAAAAT AATAAATTAT GAAGGGCTTA GGCGAGGCTA GAACCTCCGA       240
     CACCCTAACA TTCGTTGCAT CTGTCTAGCC ATCTACACCA CGGCTCACTT AAACGGCAAA       300
     GTAGCGAAAA CGAATGAAAT TTGCCATATA CGAAAGAAAC ACTAAAGCAG TGGCTGAAAA       360
     TACAAATACA ATTCAAAAAC AATTCTAACG GAATTCAAAA ACAATTGTGA TTCTTAGAAT       420
     ATACACGCAT AGCAACATAG AAAACAGCCC AAGACTTTTT GTGTGTATAC ATACATATGT       480
     ACATATGTGG ACACGCATAC GAAAATTGAT TTGCATTACT CAACGTTGCT TGCATTTCCA       540
     TTGTTATTTT AATTGTTTTA AAATTTTTAA ATATATAATG GAATGTAATG AGAGTTCAGC       600
     ATATGATCTA CATATTCTAT TTAACATTTA GGTTTTTTTT TAGAAATCAT AACTCTTTTA       660
     CAATTAGCTT TACATGCACA AATATGTACA TATGTATGTA TGTACGATTG CAGCCACACG       720
     CTGATCTACG CTTGCACACA TATACATACA TACGTGTATG TATGTGCGCC CGCAATGCGA       780
     CTTGCTGTAT CGCTGCCTTG CTTGCTGCGC CACATGGGTT TTGAATAGAA AACTTTATGG       840
     ACTAATAATT CTGTTTCTAG ATGGACAATC ATATTGATAT GTTCAGATTA AGATAATGAT       900
     ATTCATATCT ATATGCCAAA CCAAACTGTA TGTCTCTAGT ATTTGAAATG CATTTTTTAC       960
     ACATTTGGGG GTGGTGGGGC TAATTGGGGA CCGGAATCCA AAATCTAACA AAAACCGAAA      1020
     TTGTATTAAA TTAGTATCTA TATATATGCA GAAGACTTGG AGACTCTAAC TCTAAAGATG      1080
     AAATAGCTAG AATTTTAAAA CTGGTTCCCG ATAAATTCGT TTATCGATAA CTTTGCAAAT      1140
     ATACAAGTTA TCGGATTTCT GAAACAAACT CGTACTGCGC GTGCAATATA CGAACCTAAC      1200
     ACAAAAGGAA TGAACACTCT AGCTTTTGTA TCTTCGGAAA TCGACGCGTT CAAACATACG      1260
     GACAGACGGA CAGACGGACG GACGGACAGA CGGACAGACG GACAGACGGA CGGACAGACA      1320
     GACGGACATG GCTATATCAA CTTTTCTCGT CACCCTGATC AAGAATATAT ATACTTTATG      1380
     GGGTCTGCCA CGCCTCCTTC TGCCTGTTAC ATACTTTTAA CAAAACCATT ATACCCTGAT      1440
     TTCCCATTTT CAATGGGCTC AGGGTAT                                          1467
//
ID   ISBU2    standard; DNA; INV; 726 BP.
XX
AC   AF368867;
XX
DR   FLYBASE; FBgn0063571; Dbuz\ISBu2
XX
FT   source          AF368867:811..1536
XX
SQ   Sequence 726 BP; 219 A; 148 C; 140 G; 219 T; 0 other;
     ATACCCTGAA CCCATTGAAA ATGGGAATTC AGGGTATAAT GGTTTTGTGA AAATGTATGT        60
     AACAGGCAGA AGGAGACGTC GCAGACCCCA TAAAGTATAT ATATTCTTGA TCAGCATAAA       120
     AAAATATGTA AGTTGATTGA GCCCTGTCCG TCTGTCCGTC CGTCCGTCCG TCCGTATGAA       180
     CGTCGAGATT TCGGAAACTA CAAGAGCTAG AGAGCTGAAA TTTCACATGA ACACTCATAT       240
     GTTACTACGC AGTACGAGTT TATTTTGTTT TTTCGATAAC TCATCCCATT TCCATCGATA       300
     AAAAATCGAA AATTCTTTTC AATTTTTTAT GTTTTTTGAG CATAGCTTCT ACACCGTTTT       360
     AGCTAAAGAC TTCAAATTTG TATATTTAGA TAGATATTAT GAATACGCAG ATTATGTAAT       420
     TTTTGGATTT TGGATGCCAC GGCCCATTCG GCCCCAATTT GGAAAAAACG CATTTCAAAT       480
     ACTAGAGACT TGAAATTCGG CACATAGTTA CATTTAGACA CTCTTAATCT ACTCTGAAGA       540
     TCATGCATCT ATAAATGGAG TTATAAGCGT TCAAAGTATA GCCCAACCCA CCCCCAAGCC       600
     ACGGCAGCAA CTGCGCGGTT AGCAGAGCTC GCGCTCATGC GATCGTAAAG AAGAAGAATA       660
     TCACTTTTTT TGCAGGGTTC AGGGGATCTC GTAGTCGAGC CGTCTCGACT AGAGCCTTCT       720
     TACTTG                                                                  726
//
ID   ISBU3    standard; DNA; INV; 993 BP.
XX
AC   AY313771;
XX
DR   FLYBASE; ; Dbuz\ISBu3.
XX
FT   source          AY313771:3584..4576
XX
SQ   Sequence 993 BP; 340 A; 182 C; 176 G; 295 T; 0 other;
     CAAGTATAAA ATGTTATGAG TAATAAGACT ACGACTACGA GATACCCTGA ACTCTGCATA        60
     AAACTAATAC TCTTCTTATT TACGCGCGCT TTGCAAACCG ATCAGATGCT GCCGTAGGTT       120
     GGGGGTGGGT TGGGCTATAC TTTGGACGCT TATAACTCCA TTTCTAGCTG AACGACCTTC       180
     ATGAAAATTT CGGAATATAT TAATAGCATC CAAATGTATC AATTTGCAAA TTGTCTCTAG       240
     TATTTGAAAT TAATTTTTTT TTTTAGTTCC ATTTTATAAA TGTCTGAAAA TATCGCTTCC       300
     CATGTCAAAA AGCAGCTGGC CAAAAGTAAC AAACATGTTG AACGCTTTAA AAATGAAAAT       360
     GCAATCTGGC TGGCAACTGA AATATGATTT TTCAGAAAAA TTCAAATTTC AAAAACAAGA       420
     AAATCCAAAA TTCTAAAAAA ATAATCTAAG AATATATGCA AAATTTCAAG TCTATATCTT       480
     TAAATTTGGA GTTTATGCCG CTAAATCGGC ATTTGTGCCC ATAGTGCAAC GCAGCAGCAA       540
     CGCATAGAGA GAAAAAAAGA AAAACTGCGT CGCTGACCAA CGCAGCAGCA GTACACACAG       600
     AAAAACTGCC GAAGACGGAA AACCCCACGG TTTATGCATG GCTCACTGAG TAAGAGGGAT       660
     ATTCCTAAGC ACATTTTGAA AGTGTTATTT TGGGAGTTTT ATTTATAAAC GTCCATGCGA       720
     AACACTTATT TGTGGACGTT TTGAAATTCG AAACGGGTAT TCGGGGTCTC AAATTTGAAG       780
     TTTCTAGCTC AAACCGTGTT GAAGCTATGT CCAAAAAACG TAAAAAAGTA AACGTATTTT       840
     CGATTTCTTA ACGATAATAA GGAAATGGGA CTTATCGAAA CAATCAAGAA TCTATATACT       900
     TTTTGGGGTC TGCGACGTCT CCTTCTGCCT GTTAAATACC TTTTCACAAA ACCATTATAC       960
     CCTGAATCCC CATTTTCAAT GGCTTCAGGG TAT                                    993
//
ID   NEWTON    standard; DNA; INV; 1510 BP.
XX
AC   AF368890;
XX
DR   FLYBASE; FBgn0063569; Dbuz\Newton.
XX
FT   source          AF368890:291..1800
XX
SQ   Sequence 1510 BP; 454 A; 313 C; 304 G; 439 T; 0 other;
     CACTAACCAT ACAACACATA GACTGGACAA CTAGAACAAA CTTTTTTCAC GCACAAAAAT        60
     ATGAGCGAAG TGCCGCACAA CTTCGTATTT GTTCGGTTTC GGCACTTCGC GCTCGGGCAG       120
     TCAAAATTTG AAACGACGAA TTCAGTGCGC TGTAAGCGCT CAACCGGCAT GGTCGCATTT       180
     TCATATGAGC ACATTCTGTG TGCTATTATT CTTTACTCTC CCTCTCTCTT TTTTCTCTCT       240
     CTATCTCACT CTTTGCGAGC ACAAGCCAGT TGCCCACAAA AATTGAAATT TGTTCGCGAG       300
     TGGCAATTCG CGACGATCCC GTCTGCCATT CTTAGTAAGA GTATGCCGAA CTCTTAAACG       360
     GCTTTGCCAT TCTCATGCAA AATTTTAGTG TTTTCGTGAT CATTTTTGGG AAGGGTATGA       420
     AAGCGCTGAT GTGCGTCAGT ATAATTTTTT TCGATGAGCA TGCACACACA CATTTACAAT       480
     ATCTTGCTAC ATGTATGAGC ATTTATGTGA CTGTGTGCGA AACTATTGCT GCCTGTGGCA       540
     ATTGTAGGGC CCAACATTTG CAGTTTTTCT TGTGGACCAC GGCATTAGAA TTGTGAGAAC       600
     GGTCTTAGAT TTGTTCGACC TAGTAGACTG TCAAATCTAC TTCCCCCATT CATATGGCAT       660
     TAATGTTTAT ATGCATACAT ATGCATTTAT TGTTATACAT GTTTAATAAA TAAAAATGGC       720
     TATAATTAAT TTAGTAACAT AGCCACCAAA ATATTTTTGA ACGGGCTATA AACTATTTAA       780
     GTGGATCTGG AAATTCATAT GTATTGACAA ATTTCAGAAT ACACCATGTA CTCATGATTG       840
     CCAAAATGAC TGCTGCAAGC CGTAAAGGCT CATTTGACAG TCACTCTACA ATTCAAACCA       900
     AACAAAATAG ACAAACTACT GGATCGCGCA GGTAGCAAGA AAACAAACTG CAAATGTTGG       960
     GCCCTACAAT TGCCACAGGC AGCAATAGTT TCGCACACAG TCACATAAAT GCTCATACAT      1020
     GTAGCAAGAT ATTGTAAATG TGTGTGTGCA TGCTCATCGC AAAAAAATTA TACTGACGCA      1080
     CATCAGCGCT TTCATACCCT TCCCAAAAAT GATCACGAAA ACACTAAAAT TTTGCATGAG      1140
     AATGGCAAAG CCGTTTAAGA GTTCGGCATA CTCTTACTAA GAATGGCAGA CGGGATCGTC      1200
     GCGAATTGCC ACTCGCGAAC AAATTTCAAT TTTTGTGGGC AACTGGCTTG TGCTCGCAAA      1260
     GAGTGAGATA GAGAGAGAAA AAAGAGAGAG GGAGAGTAAA GAATAATAGC ACACAGAATG      1320
     TGCTCATATG AAAATGCGAC CATGCCGGTT GAGCGCTTAC AGCGCACTGA ATTCGTCGTT      1380
     TCAAATTTTG ACTGCCCGAG CGCGAAGTGC CGAAACCGAA CAAATACGAT GTTGTGCGGC      1440
     ACTTCGCTCA TATTTTTGTG CGTGAAAAAG TTTGTTCTAG TTGTCCAGTC TATGTGTTGT      1500
     ATGGTTAGTG                                                             1510
//
ID   GALILEO    standard; DNA; INV; 2304 BP.
XX
AC   AY187769;
XX
DR   FLYBASE; FBgn0027840; Dbuz\Galileo.
XX
FT   source          AY187769:3729..6032
XX
SQ   Sequence 2304 BP; 701 A; 468 C; 452 G; 683 T; 0 other;
     CACTAACCAT ACAACACATA GACTGGACAA CTGGAACAAA TTAATGTGCA CACTTATTTT        60
     TTGACATTAG AACCCCATCA ACTTCGTATT TGCTCGGGTT TTTACTTTTC GGGTCGGGAG       120
     AGAAAAATTG CTGATGACAA AATCATTCCG CTTCGAGCGC TCGACGGTGA CGGTCGATAT       180
     TCCAAAAAGG CCTGACATGT ACCGCTCTTT CCCTTGCTTT CTTTCTCTTT CTGCCCCATG       240
     CTTTTTACTC TCTGCTCTCT TCTCACAAAA ATATATGTAT GCTAGCACAA ACAGCAAGCA       300
     GCTCACAAAA ATTGAAATTT CTTCTCGACG CGATCCCATT GGTTCCCTTC TGAGCGAAGG       360
     GTATACCGAA TTCTTAAACG GCTTTGCCAT GCTCATGCAA AATGTTAGCG TTTTCATGAT       420
     TATTTGTGGA AAGGGTATGA AAGTGTTGAT GTTCATAAAC AATACTATTT CCCGATGACC       480
     ATACACACAC ACATTTACAC TTCCTCGCTA TATGTGTAGG CATTTATGTG CTTGTGTGCA       540
     ATATTCTTGC TGCCTGTAGA ACTATTAGAA TCCCAGCAGT TGATGTTCGT TCGGTTGGGT       600
     AGCGATGTGA GCTTGCATAC ACACACACAT TTACACTTCC TCGCTATATG TATAGGCATT       660
     TATGTGCATG TGTGCGATAC ACTTGCTGCA TGTAGCAATT CTAATTTCCG AGCGATTGCT       720
     GTTGGGTAGC TGATGTGAGT CTACACACAC ACACATACAT ATGTAAGTGT ACGTCTGTGA       780
     TGTCATAATC ACAATCGCCG AGTATCACTT GTATAGGCAC TTGAATGAAT GCTCTGCCTG       840
     GGGTGTGCTT ACCTCAACTT TGAGTTAAGT AAACGATTTT CGGTTCAAAT TGCACGAGAG       900
     GTCAAATATT TTCAATTACC TGTTCGGTTA TCATTTGTTC TTTAATATTT AGTACCTGTT       960
     TTGACCCTAT AGGCAAAAAT GATACATGTT ATTCAAATGC TTGCGCAAAT TCAGGTCACA      1020
     TATAACCCTT TTTAATAAAT GCCTACATAT ACAGGTAAAA TTTACCCTTT TATGCAAAAA      1080
     ATATGCATCC GTTATGTAGA CATATTTTTC ACTAAATAAC AACAAAAATA TATTATGTTT      1140
     TATGTTTTAT TTATTTTAAA TTTCTTATTC ACGAATCATT TTCAGTTTAC TTACAGGTAC      1200
     TAAATATTAA AGAACAAATG ATAACCGATC AACAGGTAAT ACAAAATAAT TGACCTCTCG      1260
     TGCAATTTGA ACCCAAAATC GTTTACTTAA TTCAAAGTAG GTAGGCACAC GCCCAATATT      1320
     CGAGACCCAT GCACGAAACA TGCAAATGCC CCAGGCAGAG CATTCATTCA AGTGCCTATA      1380
     CAAGTGATAC TCGGCGATTG TGATTATCAC ATCACAGACG TACACATATG TATGTATGTG      1440
     TGTGCGTATG CATGCTGACA TTGGCTAGCC AACAGCAATC GCTCGGAAAT TAGAATTGCT      1500
     ACATGCAGCA AGTGTATCGC ACACAGGCAC ATAAATGCCT ACACATATGG CAAGGAAGTG      1560
     TAAATGTGTA TGTGTACAGA ACGATCAACT GCTGGGGTTC TAATAGTGCT CTACAGGCGG      1620
     CAGCAAGAAT ATTGCACACA GGCACATAAA TGCCTACACA TATAGCGAAG AAGTGTAAAT      1680
     GTGTGTGTGT ATGCAAGCTC ACATCGCTAC CCAACCAAAC GAACATCAAC TGCTGGGGTT      1740
     CTAATGTGCT ACAGGCAGCA AGCATATTGC ACACAGGCAC ATAAATGCCT ACACATATAG      1800
     CGAGGAAGTG TAAATGTGTG TGTGTATGGT CAGCGAGAAA AAATATTCTG TATGCACATC      1860
     AACACTTTCA TACCCTTTCC ACAAATAATC ATGAAAACGC TAACATTTTG CATGAGCATG      1920
     GCAAAGCTGT TTAAGAATTC GGTATACTCT TCGCTCAGAA GGGAACCAAT GGGATCGCGT      1980
     CGAGAAGAAA TTTCAATTTT TGTGAGCTGC TTGCTGGTTG TGCCAGCATA CATATATTTT      2040
     TGTGAGAAGA GAGCAGAGAG TAAAAAGCAT GGGGCAGAAA GAGAAAGAAA GCAAGGGAAA      2100
     GAGCGGTACA TGTCAGGCCT TTTTGGAATA TCGACCGTCA CCGTCGAGCG CTCGAAGCGG      2160
     AATGATTTTG TCATCAGCAA TTTTTCTCTC CCGACCCGAA AAGTAAAAAC CCGAGCAAAT      2220
     ACGAAGTTGA TGGGGTTCTA ATGTCAAAAA ATAAGTGTGC ACATTAATTT GTTCCAGTTG      2280
     TCCAGTCTAT GTGTTGTATG GTTA                                             2304
//
ID   KEPLER    standard; DNA; INV; 722 BP.
XX
AC   AF368884;
XX
DR   FLYBASE; FBgn0063570; Dbuz\Kepler.
XX
FT   source          AF368884:4070..4791
XX
SQ   Sequence 722 BP; 241 A; 132 C; 140 G; 209 T; 0 other;
     CACTAACCAT ACAACACATA GACTGGACAA CTAGAACAAA CTTTTTTCAC GAAGCAGATT        60
     ATGATTTCCC GTCCTAGTCA TCTTCGTATT TGCTCGGCTC TTTAATTTAC TGTTCGGGCA       120
     GCGAAAATAT AGCAGTTGAT ATTCAGTTCG AGTCACATAA ATGCTCATAC ATGAAGCAAG       180
     ACATAGTAAA TGTGTGTGTG CATGCTCATC GCGAAAAAGG AATGCTTATG TACATCACGC       240
     TTTCATACCC TTCAAAAAAA TAATCACGAA AACACTAAAA TTTTGCATGA GCATGGCAAA       300
     CCTTTTGAAG AGTTCGGCAT ACTCTTATTC AAAAGCGAAC ATGTGATCGT CGCGAATCGC       360
     GACTCGCGGA CAAATTTCAA TTTTTGTGAG CTGCTGGCTT GTGCCTGCGT AGACACACAT       420
     ACGTATATAC ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT       480
     AGAGAGGCAT AGAGAGAGTG AGTGAGTAAA GAGAGAATAG CACACATCGG ACTTCATATG       540
     AGAATAAAAT CATTTCGTTC GAGCGCTGGC AGCGAACTGA ATATCAACTG CTGTATTTTC       600
     GCTGCCCGAA CAGTAAATTA AAGAGCCGAG CAAATACGAA GATGACTAGG ACGAGAAATC       660
     ATAATCTGCT TCGTGCAAAA AGTTTGTTCT AGTTGTCCAG TCTATGTGTT GTATGGTTAG       720
     TG                                                                      722
//
ID   YAKHETA    standard; DNA; INV; 5691 BP.
XX
AC   AF043258;
XX
DR   FLYBASE; FBgn0024768; Dyak\HeT-A.
XX
FT   source          AF043258:34..5724
FT   SO_feature      five_prime_UTR ; SO:0000204:1..587
FT   SO_feature      three_prime_UTR ; SO:0000205:3276..5691
FT   SO_feature      CDS ; SO:0000316:588..3275
FT                   /protein_id="AAC01742.1"
FT                   /translation="MAQVILSDDSSNDEVLSLFSSPESQNTPFYLEISPMSQNSNNSQ
FT                   FNISIINMKKSSSNSAINSLKNPSEAAIKIINSLTYKGKENRENKNAQKDPLFLTNTN
FT                   KETAGAKSSVSNGPVVSLLSVTHTNRGKKLTTAHNTNAAETTNTNMDDKKSGALRNFP
FT                   FPTHEDNSMERNLSSSTKIGSKSISPHSLSPTHTSKVINISTNSRSKSPALANADTLH
FT                   KLANIYDNSRDHNQGETQHKFITRNTFFQNLYPKPDISKLSLKNKATILAKTTKNKCI
FT                   SPQLKGASLCSPVQPNLNFKVTTTHSMGNTSASRTLNRPAAKRDLFNSPPNSTNALPM
FT                   SFSEVVAGTGPGIVASSDPAPITKTPGKRTNTNMDMDSFSYKTPNKKACVPTNFATPN
FT                   PFPPLATPIFKSKAAKSIVEEIKAPRHPVESEKASARSVPAQTEIAPPPPKNSATELP
FT                   PWQIVPQSRRAPPIHIKNVREIVPLLEKLNYSAGVDSFTTKTSIGNGVTIQAKDLTAH
FT                   RIIKDILAKSGIPYYSNQNKSERGFRVVIRHLHPSTPCSWITSELQKLGHQTKFTRNM
FT                   TNPATGGPMRMHEIEIVSAMDGSHLRILSIKQLGGQKVEIERKNRTRELVQCFRCQGF
FT                   RHARNTCMKPPRCMKCAGQHWSSECTKPRSTPATCSNCQGNHISAYKGCPAYKAEKQK
FT                   LAVNRIDFHKIRTIMDAKSNNNERQPRPPFNKTPRLPYSTEMAEARKEAARKSAMNPF
FT                   RQNVKDSRPNLPYLSSHEIAIQKRLNKWRRSTNKASTNSRTNPKVKAPNMTKNPAQRH
FT                   LEKFQNGLRKEQKNVEKAMEHKQGKDDSPPTTSRAALANLKPKIVKETTPSPQNINTF
FT                   PENSQPDDPVIKLANRVDNLEKKIDILMALIIQARNAHE"
XX
CC   Annotation from Mary-Lou Pardue (6 April 2004).
XX
SQ   Sequence 5691 BP; 2041 A; 1425 C; 1025 G; 1199 T; 1 other;
     CAAACGAAAA ATAAACGGGA CAGTTAAGTG AAAATCTCCG CAAGTGAAAA GACAAAAGCA        60
     AAGTTCAAAT AGCAAAGTTA ATAAAAAATA TTTTAAATTG CCTAAAAATT GTTTATAACA       120
     ATTACAATTT AAAATACAAT CAAAAGTACA AAGCAAACGA AAAATAAACG GGACATTTAA       180
     GTGAAAATCT CCACAAGTGA AAAAACAAAA AATTCCCGAC CGAAAAATTT ATATAGAAAC       240
     AATTCGACAA ACAATTAAAA TAAACAATTA AAATAAACAT ATTAAAAAGC ATATAAATTC       300
     GGTTTTTTCG GTGAAATACT TTGAGACAAA TCGACAAACT CAGCGAGCTG CAGATTTTAA       360
     TAAAGAAGAG GAGCCATAAA GAAGAACATA AAGAGGAGCT ATAAAGAGGA ACCTTAAAGG       420
     AGAACCATAA AGAAGAACGC TAACGTCGCA AAGAAGGAAG AACGCAAAAA AGAGGCAAAG       480
     AAGGACTAGC AAAGAAAAGG AATCGTACCA AAGGACCCGC CAAAACCAAA GCCAGGGTAT       540
     TTATACCACA AAAAGTATCG TTCCTTTACA TATAGTCAGC AAATATTATG GCCCAAGTAA       600
     TTCTCTCTGA CGACTCTTCA AATGATGAGG TGCTCTCTCT TTTCTCGAGC CCAGAAAGTC       660
     AAAATACCCC TTTCTACCTG GAAATCTCGC CCATGTCCCA AAATTCTAAC AACTCTCAGT       720
     TTAATATCAG CATAATAAAC ATGAAAAAAT CGTCTTCCAA CTCTGCAATT AACAGTCTAA       780
     AAAACCCTTC CGAGGCTGCT ATAAAAATTA TAAATTCACT TACATATAAG GGGAAAGAGA       840
     ATAGAGAAAA CAAAAATGCC CAAAAAGACC CGCTCTTCCT TACTAATACC AATAAAGAAA       900
     CAGCTGGCGC CAAAAGTAGC GTCTCAAATG GGCCAGTGGT TTCCCTTCTT TCTGTCACAC       960
     ATACAAATAG GGGGAAAAAA TTGACAACAG CTCACAACAC CAATGCAGCT GAAACCACTA      1020
     ATACCAACAT GGATGACAAA AAGAGCGGCG CTCTTAGAAA TTTCCCTTTC CCCACACATG      1080
     AAGACAACAG CATGGAGAGA AACCTCAGCT CATCTACAAA AATTGGCTCT AAAAGCATTT      1140
     CCCCTCACTC TCTCTCACCT ACACACACAA GCAAGGTTAT TAACATAAGC ACAAACAGCC      1200
     GCTCAAAAAG TCCCGCGCTT GCAAATGCTG ACACACTACA TAAACTAGCC AATATATATG      1260
     ACAATAGCAG GGACCACAAC CAAGGTGAAA CACAACATAA ATTTATAACT CGCAATACTT      1320
     TTTTCCAAAA CTTGTATCCT AAACCTGACA TTTCCAAACT AAGCTTAAAA AATAAGGCCA      1380
     CCATTCTCGC GAAAACTACA AAAAATAAAT GCATCTCCCC CCAACTGAAA GGCGCTTCTT      1440
     TGTGTTCCCC TGTTCAGCCT AATTTAAATT TCAAAGTCAC CACTACACAC TCTATGGGTA      1500
     ACACATCTGC ATCCAGAACC CTAAACCGGC CTGCAGCCAA GCGGGACCTT TTTAATTCAC      1560
     CCCCCAATAG CACGAACGCA CTGCCTATGA GTTTTTCGGA AGTGGTGGCC GGAACCGGTC      1620
     CAGGAATTGT GGCATCCTCT GATCCGGCAC CAATTACGAA AACCCCGGGC AAGCGCACAA      1680
     ATACCAACAT GGACATGGAT AGCTTTAGCT ACAAAACGCC CAATAAAAAA GCATGTGTGC      1740
     CCACCAATTT TGCGACCCCA AACCCTTTCC CCCCCCTAGC CACCCCCATC TTTAAAAGTA      1800
     AGGCGGCCAA AAGTATTGTC GAGGAAATAA AAGCCCCCCG CCACCCAGTC GAGAGTGAAA      1860
     AGGCCTCTGC ACGCAGCGTA CCGGCGCAAA CTGAAATTGC CCCCCCTCCC CCTAAAAATT      1920
     CGGCTACCGA ACTGCCCCCG TGGCAAATAG TTCCACAGAG CCGCAGGGCC CCCCCTATTC      1980
     ATATAAAAAA TGTTAGGGAA ATCGTGCCAC TATTGGAAAA GCTAAATTAC TCAGCAGGGG      2040
     TAGACAGTTT TACAACAAAA ACGTCTATAG GAAACGGTGT AACTATACAG GCTAAAGACT      2100
     TGACTGCACA TAGAATAATT AAAGACATAC TTGCTAAAAG TGGTATCCCA TACTATTCAA      2160
     ACCAGAATAA ATCTGAAAGG GGTTTCAGAG TTGTTATTCG TCACCTGCAC CCCTCTACCC      2220
     CTTGCTCGTG GATCACCAGC GAGCTGCAGA AGCTCGGCCA CCAGACTAAG TTCACAAGGA      2280
     ACATGACAAA TCCTGCAACT GGTGGTCCGA TGCGGATGCA CGAGATAGAA ATTGTCTCGG      2340
     CCATGGACGG AAGCCACCTT AGGATCCTCT CCATTAAACA GCTAGGAGGA CAAAAAGTGG      2400
     AAATCGAAAG GAAAAACAGG ACGAGGGAAC TCGTCCAGTG CTTCAGGTGC CAGGGTTTCA      2460
     GGCATGCTAG GAACACATGT ATGAAGCCCC CTAGGTGCAT GAAGTGCGCA GGCCAGCATT      2520
     GGTCTAGTGA GTGCACTAAG CCAAGATCAA CCCCCGCCAC CTGTTCAAAC TGCCAAGGAA      2580
     ACCACATCAG CGCATATAAG GGGTGCCCTG CCTATAAGGC AGAGAAGCAA AAATTAGCAG      2640
     TCAACAGGAT AGATTTTCAC AAAATTAGGA CAATAATGGA CGCAAAAAGC AACAATAACG      2700
     AACGTCAGCC CCGCCCCCCT TTCAACAAGA CCCCCCGACT ACCCTATAGT ACCGAAATGG      2760
     CCGAAGCCCG AAAGGAAGCC GCCAGGAAGT CTGCAATGAA CCCGTTCCGG CAAAATGTGA      2820
     AGGATAGTAG GCCAAACCTA CCGTACCTTT CTTCACATGA AATTGCCATC CAAAAACGCC      2880
     TAAATAAATG GCGCCGGAGT ACAAACAAGG CCTCCACAAA TAGCAGGACC AATCCTAAGG      2940
     TAAAGGCCCC AAATATGACT AAAAACCCTG CGCAAAGGCA TCTGGAAAAA TTCCAGAACG      3000
     GGCTTCGAAA GGAACAAAAA AACGTAGAAA AAGCTATGGA GCACAAACAG GGAAAAGACG      3060
     ACAGCCCCCC GACAACGAGC AGAGCTGCTT TGGCAAATCT AAAGCCAAAG ATAGTCAAGG      3120
     AGACAACGCC CTCACCACAA AATATCAACA CTTTTCCAGA AAATAGCCAA CCCGACGACC      3180
     CAGTCATTAA ACTGGCAAAT AGAGTTGACA ACCTGGAAAA GAAAATTGAT ATATTAATGG      3240
     CCTTAATTAT ACAAGCAAGA AATGCGCACG AATAAACCTC TTGACGACGT ATTCCTGCTG      3300
     ACCCCCACGA TGAAGACGTA AAGGATGCCA CCCACTAGGA CCAGCATATA CGAATCTGGA      3360
     AGCTGATGGA CAGGAGAAGG ATCAACGCGC AGCAAAAACA TGATGAATTT AAGTCGACTC      3420
     ATTGCAGCAG CGTATCGACA ACGTCACTTA TCTGAATTTT TTGCTGCAAC TCCTTTGAAA      3480
     TGTCCCAAAA CACCAGCTGC AATCTCTACG AAAGCCATAC TTGACGACAA AAGACGACCC      3540
     GACTGGGCGA AATGGACAAA CTAACTTCTT GACACTCATA ACACAAAAAA CATACAATGT      3600
     TTTGATGCAG TTTCCTTATT GGGATTCCCC CTCGTTTTTA CAGACCCTAG GCGTGGTGCT      3660
     GCCGACGCGC GAAAAGGTCG AAATCGTAAC CTCTATAATT GACTTTTTTC CTCCAGAAAT      3720
     GCAATATCGA CAAAATCTCC GTTAAAGATT GAAATACTTT AATCAAAACA TAAAACAGAG      3780
     CAATATATAA TAATATATAT AAAAATCCAC AATGTTTTGA TGCCGTCCCT ATTCCAGGAA      3840
     GCCCCCTCGA TTTTATTGAC CCTTGGTGCG CGCTCGCGAC CCGGCAAAAG GTCAAAATCG      3900
     TGACCCTTGA ATTTCGACTT TTTCTGGTAG CAACGATAAC ACTGACAATA TCCCTGAAAA      3960
     AGAAAAACAT ATTAATAAAA GCATAAAACT ACGCAACCTA CTACTTCCCT GCTAGGCGCA      4020
     ACGAAAAACG AAGCTTTTGG CACCCAAAAC ATTAAAATCC TATAATGTTT GGATGCCGTC      4080
     TCCATGTTGG GGTGCATCCT CGTCCTTCTG AACCCTAGGT GCGCCGCTGC TGACCCGGTA      4140
     AGGGGTCAAT CTCGCGACCC TTGAATTCGA ATTCGACTTT TTCCTGGCAG CAACGGCTTA      4200
     CAGACAAAAT CCCTGTAAAA TCATAAAACA AATTAAAAAA CAAATTTATA AAAACATAAA      4260
     ATCACGCAAC TTACCTTTTC CCGACTCGGC GAAATGAAAA ACGACGATTT TGGCACATAA      4320
     AACATTAAAA ACCTAAAATG TTTGTGCCGT CTCCATGTTG GGATGCCCCC TCGCCCTTAT      4380
     GAATTCCAAG TGCGGCGCTG TTGACCCGGC AAAAGGTCAA AATCTTGACC CTTAAATTCC      4440
     ACCTTTTCTT GGTAGCAACG GCATACTGAC AATATCCCTG AAAAGAGCAA AATAAACTAA      4500
     CAACAACAGA AAACTAAATG CATTTACAAA CTCACTGACA AACGAACCTC CGACGATGCT      4560
     CTTTATAAAT CCAAGGCAAT GCATTCCTAC CCAAATCCCA CCGGAAAAAA TGAAAAATCC      4620
     TGGACGATTT GGACCTGCAA AAGAAAAGAC AAAACAAAAA TCAGAAACAA AACTAAACAC      4680
     ATAGATATAC TTATCTAATC CAATTTTCTG CATCCAATTC CATGGACACT ACGAGCGTCG      4740
     GCCCTAAGCA AAGCATCTTG GCCCGGCGTC CACAAGATGC CTCCTTTCCC TGCGAGACGA      4800
     CCCACAGAAG CGACGACCCT GGTGACTCCA AAGCAATGAC GACGCTCTCG CCGACACGAT      4860
     GAACTCCAAC CGAAGTGAAG CAACTCCCTG GACCCTGGAA TAAGACGGCG ACGCGAATCC      4920
     ACTACGCACT GAAGAACTCC AGCTGAAATG CAGCAACTCC TTGGACCTTG GAATAAGACG      4980
     GCGGCGCGGG AATCCACTTC GCTTTGGACC ATTTGACGGC TGGCGACGAG ACCCATGGGC      5040
     GGGTTGGCAG CCTCCTGCAA ATTAAAATAT AAATTGACGG CGGCGCGGGA TCTGTACACG      5100
     AATATAAAAA CACTGACGAC TGGTGAAACT ACTGTAACAA AAATGAAAAC TCAAACGCAA      5160
     AATAACGGCC GCTGTGGTGG TAAAAAGTAC CACACTTGTC AGCCGGCCAA AATTTACACC      5220
     AGGAATACTT ACCAGAAACG CTGGCCCAAC TTTTTCCTTT CAAATCTGCG CGCAGCCTGC      5280
     GGCTCCAAAT AACTGGGACA AACAACTCCC TTTCTCCACC GGCAATGACT CCTGAnGTTC      5340
     GATGTTTCCG TCCTTCTGGC GGGGGCATCT GAAAATAGAA ACAATATAAA TGTTAAACTT      5400
     AATTTAATTG ACAAATGCAA ATTTCCTAAA CCTTTAAAAT GTTAACAAAC AAAAACCATA      5460
     TGTTAATGTT ACCATCCACG CAATGTTTAT AAGTAAGAAA ATACCAAACC ATGTTATACT      5520
     TACCACACCT GTCCCAACCC TAACACTCAT CCCCAACAAT GTACAAATTC AAAATCGAAA      5580
     ATAATTGTAC CTAGATATTG CATCTGTGTA ATCACAGGCA AATAAATGCG TGGATGCGGG      5640
     GCAGAAATCA TCATTCTGTC TCCCGTACTT TCACCAGAAA CGTCAAAAAA A               5691
//
ID   TARTVIR    standard; DNA; INV; 8500 BP.
XX
AC   AY219709;
XX
DR   FLYBASE; FBgn0066148; Dvir\TART.
XX
FT   source          AY219709:4651..13210
FT   SO_feature      five_prime_UTR ; SO:0000204:1..197
FT   SO_feature      three_prime_UTR ; SO:0000205:7957..8500
FT   SO_feature      CDS ; SO:0000316:198..3311
FT   SO_feature      CDS ; SO:0000316:3362..7957
FT                   /protein_id="AAO67563.1"
FT                   /translation="MQKPTVSKSPPKSPHNASEITANSAVPPHRATEECSISERAKSE
FT                   LSQLQQQLTKNPQKQLSREHRRQQLLRLCEEEERLMPDVPAQQPTLTLKHKPKLKTVL
FT                   ANSSPPSSAPLRMSLTKSSKAKARKESQSSACREKSPEENTYVNVLESDDESDIAANK
FT                   NYDQPQQQTTIAQVHNFNTNTSITSTPKAASHCDPSPNVSAHEVELHNVDNTREASYV
FT                   NNIDELTDVFDDEDDDDDCYRPAAVINSSVADMLNRTTTVEHNSTATANRGEILANVK
FT                   TSDAFAANKINSITFEKIEPIPQTITPTVAKGPKFNCSMLPTTSLSAKKSLKRKGTLP
FT                   QQSKQKRAQTLAVQGNSRPGMKIQDFLKSSTRVTKATNKAAIINKYKKSNRNTKKVNP
FT                   SSSTKLNNSSMDIDLDSSDISANNIGSDDDIVQIQSNAQEVTNHATKVQQQQQHRQQQ
FT                   QHHQQQQQQQQQQPTKSTKIPTIFLPSISDIQQIIDMLNNTVGANKYTTKCTQNDGVR
FT                   VQCSDLLSYNAAIALLGANTEIQMHTHQMRSERGYRVLLKNVHHSTPCEQIRAELAKH
FT                   GHTVRFASVIKHRFERRPLNMFEVELAPNGDTNDKVLELKTLGNQHIEVERQLKRDEP
FT                   VQCHRCQSFGHSKNYCRRPFACLKCGEQHPTTTCTKPRNTPAKCVNCKADHIASFKGC
FT                   SVYKMEREKLAANRVRAAIDRQQQHQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQ
FT                   QQQQQNRQLQQHQQQQQQQHRQLQQHHQQQQQLQHQHQQPQYLAINTSAPSGIKSTKE
FT                   RKQQQQQLRQQQQKQQQQQQQQHQQLKPNNQLTYSQVASGQANTSLSHNPAMQHLKKY
FT                   QQQLQLEQQQQQRQQQQQQQQQLQPEQQQQLQRQQRLRQQQLPEQQKRQQYQRQQEQQ
FT                   SHEQQQRHQQQSQQQQHRQQADSPLLEALQQNVISINEMSKKIDMLISLLLTMAASNT
FT                   NINKQGEQQTIPLTTSTSDTLNNVNKKNNFPNLMSTLISTAQPINNSQSANANCEHIA
FT                   TDSSQYV"
FT                   /protein_id="AAO67562.1"
FT                   /translation="RRGVELLRSIHSNKKLNILATGGATHFPYTSRNRPSAIDIAVYR
FT                   ALTMTGLQTHSTIDLESDHLPIHIGLRVGRFPYKQTTMRLLPINANVKKFQNHLDKNV
FT                   RLNTEIISGPDIEDAIDILNKNIYNASLAATHPPRRHQQQQRQGTNTNRMNHGRFKLT
FT                   NETIRLLAIKRQRKREHMVMRTPLTRSRLSQAQNKLKKALRMDKKKQTNKMFEQIDAT
FT                   DRYKIQKLWRITNNIKRQPEPNWPLKIQATDNNNSRSNRTQWTKTSKEKAEVFAAYLE
FT                   QRFSPIFSNTAEYRLQVNNEINTRQQTNDCDSGAGVAGVIPFRPITYTEVTKEIGCLT
FT                   IKKAAGIDNIDNRVIKALPKKAILYLVMIYNCILRHGHFPRQWKCAAIKTILKPGKPT
FT                   EDVASYRPISLLAGFSKIFERLLMYRLYECSEFAKAVPLHQFGFRKDHGTEQQLARVT
FT                   QFILSAFEKKQYCSAVYIDIREAFDRVWHEGLLLNLARYCLIGCIMVLKSYLLDRTFI
FT                   VHGNEGIKSRIGKVSAGVPQGSVLGPILYIIYTSDMPLPHIATPPNPTTTAATITNTE
FT                   TSITNPYNCSMLLSTFADDTVIMSSADILQTSYSANQTYLRQFTIWCNRWCIQINDSK
FT                   SAHVVHTLRNLNSRMNYLTPRLNGQEIPSKPRQKYLGVHLDRKLHMQHHVTQLRCRLK
FT                   ALYNKLEWLIGNKSVLSVECKITIYKQMIAPIWRYALPIWGAMISDTQLRRIESTQNW
FT                   ILRKIVKASWWTRNKDIRDTYDIGTVDEIFHTTSKRFADSLAIHPNANARKLIASPYV
FT                   PIRLDRQRYSLQLQQHVRPLQQLVQQSQEQQQLPTLLRMELEEEEANSLRMQQQQQQQ
FT                   TPQQQPARFSEMRINSLRRHYREGRITLEELKLAIREQPLVIQQLVLPRELAIQIYQQ
FT                   QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQEQQQQQQQQQHQYQQQH
FT                   QQQQQQQIQQQQQQLEGLQHQPNQSPDVEIVLDTPQQQQEQQLERPLPQPQQANLQQQ
FT                   RLTEDEQQLEHRLERLRQQLEREMDEAANNEPTQQQRTPEQQQSNQQQHTIALTENKN
FT                   TNINPSNSVCANITNFSISQSIIIAPYSLINIATDAPWQQNQPTTTQQLRQQHSNLHQ
FT                   QHLQQQREVVEAPSSNNAQSTVRGAKRRRSSSTSCIEPKRRSPAAPDNQQQRQLHTLL
FT                   GKRHSGGPAQHNCWPPKRQKLVQQQQQRQACLRRTRLGTWQLQMPHRLGIWLLLSCFG
FT                   MQTHHKVPQKLVWAPPADYGQSSTNGRHLQIARRRPWHSWQRLQRRWSNCGRQTHRKA
FT                   RPYNILIHET"
XX
CC   Annotation from Elena Casacuberta (6 April 2004).
XX
SQ   Sequence 8500 BP; 3098 A; 2143 C; 1624 G; 1635 T; 0 other;
     CAATTTAAAA AAAACACAAC TTAAAAATCA GAATTTTTCA ATTCTAATAA TTAACCAAGC        60
     TTGCAAATAT ATTTGTGAAG TTATCTGAGT AATTGCTAAA CAGGCATAGT GGCAAGCAAA       120
     TACAATAAAT ATTTAAAAGG TGCAATAGTG GTAAAGACAA ACATAACTGC ACCAGAAATA       180
     ATATATAAAG TGCATAAATG CAAAAACCAA CTGTGTCTAA AAGCCCGCCT AAAAGTCCGC       240
     ATAACGCTTC TGAAATTACC GCAAACTCGG CTGTCCCCCC CCACCGCGCA ACCGAAGAAT       300
     GCAGCATAAG TGAAAGAGCG AAAAGTGAAC TTTCACAGTT GCAGCAACAG CTCACAAAAA       360
     ATCCGCAAAA GCAGCTCAGC CGAGAACACC GGCGACAGCA GTTGCTAAGG CTATGCGAAG       420
     AGGAGGAAAG GTTAATGCCC GATGTCCCAG CGCAGCAGCC GACGCTTACG CTCAAGCATA       480
     AGCCGAAGCT GAAAACAGTT CTCGCCAACT CTTCACCGCC CAGCTCGGCA CCGCTGAGAA       540
     TGTCTCTGAC GAAGTCGTCG AAAGCTAAGG CAAGGAAAGA GAGCCAATCA TCTGCCTGCA       600
     GAGAGAAAAG TCCAGAAGAG AACACCTATG TCAATGTGTT GGAGTCTGAC GATGAAAGCG       660
     ACATAGCAGC CAATAAAAAT TATGACCAGC CGCAACAGCA GACAACTATT GCACAGGTAC       720
     ATAATTTCAA TACAAATACT AGCATAACTA GCACTCCCAA AGCAGCCTCT CACTGTGATC       780
     CATCGCCAAA CGTATCGGCA CACGAAGTTG AACTTCATAA TGTTGATAAC ACAAGAGAAG       840
     CTAGCTATGT TAATAACATT GATGAACTAA CAGACGTCTT TGACGACGAA GATGATGATG       900
     ATGACTGTTA CCGGCCCGCT GCTGTTATTA ACAGCTCAGT TGCTGACATG CTTAACAGAA       960
     CAACTACTGT TGAGCATAAC AGCACAGCCA CTGCTAACAG AGGGGAAATT CTTGCAAATG      1020
     TTAAAACATC TGATGCATTT GCTGCCAATA AAATTAATAG TATTACTTTT GAAAAAATCG      1080
     AACCAATTCC ACAAACAATA ACGCCAACAG TAGCAAAAGG ACCTAAATTT AACTGCTCTA      1140
     TGCTACCTAC AACTTCCCTG TCTGCCAAGA AAAGTTTAAA ACGTAAAGGT ACACTGCCGC      1200
     AACAAAGTAA ACAAAAGCGA GCACAGACAC TGGCAGTACA AGGAAACTCA CGACCAGGCA      1260
     TGAAGATACA GGACTTCTTG AAGTCATCAA CAAGAGTAAC TAAGGCAACA AATAAAGCAG      1320
     CTATAATCAA CAAATATAAA AAAAGCAATC GTAATACTAA AAAAGTAAAC CCCTCTAGCA      1380
     GCACTAAACT CAACAACAGC AGTATGGATA TTGACCTGGA TAGCAGCGAC ATATCAGCAA      1440
     ATAACATAGG CTCTGATGAT GACATTGTTC AGATCCAGAG CAATGCACAA GAGGTTACAA      1500
     ACCACGCCAC CAAAGTCCAG CAACAACAAC AGCATCGACA GCAGCAACAA CATCACCAGC      1560
     AGCAGCAACA ACAGCAACAG CAGCAGCCAA CTAAAAGCAC AAAAATTCCA ACAATTTTTC      1620
     TACCCAGCAT AAGTGACATA CAACAAATAA TTGATATGCT CAATAATACA GTGGGTGCAA      1680
     ATAAATATAC AACAAAGTGC ACACAAAACG ATGGAGTCAG AGTGCAATGC AGCGACTTAC      1740
     TATCGTATAA TGCAGCTATA GCACTGCTCG GCGCCAATAC GGAAATACAG ATGCACACCC      1800
     ACCAGATGCG AAGCGAGCGA GGATACCGTG TTTTACTTAA AAATGTCCAC CACTCCACGC      1860
     CATGCGAGCA AATCCGAGCA GAATTGGCGA AACATGGACA CACGGTTCGC TTTGCCAGCG      1920
     TCATTAAACA TCGATTTGAG CGACGGCCAC TTAACATGTT TGAAGTCGAA CTGGCACCAA      1980
     ACGGCGACAC CAACGACAAA GTACTGGAAC TGAAAACTCT GGGAAACCAA CACATTGAAG      2040
     TAGAAAGACA GCTGAAGCGA GATGAGCCTG TACAGTGTCA TCGGTGCCAA TCGTTTGGGC      2100
     ATAGCAAGAA CTACTGTCGT AGGCCTTTTG CATGTCTCAA ATGCGGTGAA CAGCACCCGA      2160
     CTACAACGTG TACTAAACCC AGAAACACAC CTGCTAAGTG CGTCAACTGC AAGGCTGACC      2220
     ACATAGCCAG CTTTAAGGGA TGCAGTGTGT ACAAAATGGA GCGGGAAAAA CTAGCAGCAA      2280
     ACCGTGTCCG GGCGGCAATT GATAGGCAAC AGCAGCACCA ACAACAGCAG CAACAGCAAC      2340
     AACAACAGCA GCAGCAGCAG CAGCAACAGC AGCATCAGCA ACAGCAACAG CAACAACAAC      2400
     AGCAACAACA GCAGCAGCAA CAACAACAAC AAAATCGGCA GCTACAACAA CATCAGCAGC      2460
     AGCAGCAACA ACAACATCGG CAGCTACAAC AACATCATCA GCAGCAGCAG CAACTACAAC      2520
     ACCAACACCA GCAGCCACAA TACCTAGCAA TTAATACTTC AGCTCCTAGT GGAATTAAGT      2580
     CGACTAAGGA ACGGAAGCAA CAGCAACAGC AACTTCGGCA ACAACAGCAA AAGCAGCAGC      2640
     AGCAACAACA GCAGCAACAT CAACAATTGA AGCCAAACAA TCAACTGACT TATAGCCAAG      2700
     TAGCCAGTGG ACAAGCAAAT ACGAGCCTCA GTCACAACCC AGCCATGCAA CACCTCAAGA      2760
     AGTACCAGCA ACAGCTACAA CTGGAGCAGC AACAGCAGCA ACGACAACAG CAGCAACAAC      2820
     AACAGCAGCA GCTACAGCCC GAGCAGCAGC AGCAACTTCA GAGGCAACAG CGACTGAGGC      2880
     AACAACAACT ACCTGAGCAG CAAAAACGGC AGCAATATCA ACGACAGCAA GAGCAGCAAT      2940
     CACATGAGCA ACAGCAACGA CACCAGCAGC AATCGCAACA ACAACAACAT AGACAACAGG      3000
     CGGACTCACC ACTCTTGGAG GCGCTGCAGC AAAATGTGAT AAGTATAAAT GAGATGTCCA      3060
     AGAAAATAGA CATGCTAATT AGCCTGTTGC TCACAATGGC AGCAAGCAAC ACTAATATTA      3120
     ATAAACAAGG AGAACAACAA ACAATCCCAC TAACAACATC AACCTCTGAT ACCTTGAACA      3180
     ATGTCAATAA AAAAAACAAT TTTCCTAATT TAATGAGTAC ATTGATTAGC ACAGCACAGC      3240
     CAATAAACAA CAGCCAATCG GCAAACGCCA ATTGTGAACA CATAGCCACT GACAGTAGCC      3300
     AGTATGTATA GAGCGAACAA CACCAACAAT GCCAGCGCGA CTGCCACATT GAGTCAAGTC      3360
     AATGATGGCA GACACACCAC TCACACTACT AGTGACACCA CAACTACTAC AACAACACAT      3420
     TTGTCCAACC TTAACAGTCC ATTGCTTAAC AGGAGAAGGC CAAACATTAT TCCAAATGAC      3480
     GAACCACAGC AGCGACCAAT ATGGCAACTC TTTTAAAATT GCATATTGGA ACGCTGCTGG      3540
     CGTTAGAAAC AAACTAAATG AATTAGAGGT TTTCATGAAT CGACATAAAA TTGATATTAT      3600
     GATGCTCGTC GAGCTACGAT TGGGCCCCAG CGCTCTCAAT CCAGGTCCCC CAATTACTAT      3660
     TAACGGCTAC CATACATATG CGGCAACTCG CCCACCACCA CACCATAGAT GCGGGGGTGT      3720
     TGCCACTTTA GTAAAACACG GAATCAAACA CATTGCCCTG GAAGCAATTG TGTTTGAATC      3780
     CATGCAATCT GCACCAGTAG CTGTGACCCT GGCAAAAAAT GAGACCATTG TCCTAGCTCC      3840
     AATTTATTGC CCACCGCAAT ATAATTGGAG CGCTGACATG TTTGCCAAAC TTTTCCAACA      3900
     TTTTGAAAAA TTGAGCGGGT CCGGGTTCAT TTTATGTGGC GACTGGAACG CCAAACATTC      3960
     CTGGTGGGGC AACCAACGTG CTTGTCGACG AGGGGTAGAG CTGCTAAGAA GCATTCACAG      4020
     CAACAAGAAG CTGAACATTC TTGCTACAGG TGGGGCTACA CACTTCCCAT ACACAAGTAG      4080
     GAACAGGCCA TCCGCTATCG ATATTGCGGT CTACAGGGCA TTAACAATGA CCGGACTACA      4140
     AACACACTCT ACAATCGATC TAGAATCGGA TCATCTACCT ATACATATAG GCCTCAGAGT      4200
     AGGCCGATTC CCGTATAAAC AAACAACAAT GCGATTGCTA CCGATAAATG CAAACGTAAA      4260
     AAAATTTCAA AACCATTTAG ATAAAAACGT TCGTCTTAAT ACAGAAATAA TATCGGGACC      4320
     CGATATTGAA GACGCCATCG ACATATTAAA TAAAAACATA TATAATGCTT CCTTAGCAGC      4380
     AACACACCCA CCTCGTAGAC ATCAACAGCA ACAAAGACAA GGCACAAATA CAAATCGCAT      4440
     GAACCATGGC CGTTTTAAAT TAACAAACGA AACAATTAGA CTTTTGGCAA TAAAACGGCA      4500
     GCGCAAGAGA GAACATATGG TTATGCGAAC ACCTCTCACG CGAAGCCGAC TTAGCCAGGC      4560
     CCAAAACAAA CTAAAAAAAG CGCTTCGTAT GGACAAGAAG AAACAAACGA ACAAAATGTT      4620
     TGAACAAATA GATGCCACTG ATCGCTACAA GATACAAAAG CTTTGGCGCA TCACAAACAA      4680
     CATCAAAAGG CAACCAGAGC CAAATTGGCC ACTTAAAATA CAAGCGACTG ACAACAACAA      4740
     CAGTCGCAGC AATAGAACAC AATGGACTAA AACTAGTAAA GAAAAGGCTG AGGTCTTCGC      4800
     TGCATACCTG GAGCAACGTT TCAGCCCCAT ATTCTCAAAT ACGGCTGAAT ACAGACTCCA      4860
     GGTGAATAAT GAGATAAACA CTAGACAGCA AACTAACGAT TGCGACAGCG GCGCTGGCGT      4920
     CGCTGGTGTT ATCCCTTTTC GCCCAATTAC ATATACTGAG GTGACAAAAG AGATTGGCTG      4980
     CTTGACAATA AAAAAGGCTG CAGGCATCGA TAACATAGAC AATAGAGTCA TTAAAGCACT      5040
     ACCAAAGAAA GCAATACTGT ACCTTGTCAT GATATACAAC TGCATACTCA GACATGGCCA      5100
     TTTCCCGCGA CAGTGGAAAT GCGCTGCCAT AAAAACAATT TTAAAGCCTG GAAAACCCAC      5160
     AGAAGATGTC GCCTCATATC GACCAATAAG CCTGCTTGCA GGTTTCTCCA AAATCTTTGA      5220
     AAGGCTTCTC ATGTACAGGC TCTATGAATG CTCTGAATTT GCAAAGGCCG TGCCACTACA      5280
     TCAATTTGGC TTTCGCAAAG ATCATGGCAC TGAGCAGCAA CTAGCACGGG TAACCCAATT      5340
     CATCCTGAGT GCATTTGAAA AGAAACAATA CTGCTCAGCC GTCTATATCG ATATACGCGA      5400
     AGCATTTGAT CGAGTATGGC ACGAAGGATT GCTCTTGAAC TTGGCAAGAT ACTGCCTAAT      5460
     AGGCTGTATA ATGGTTCTCA AGAGCTATCT ACTTGATCGC ACATTCATCG TACATGGAAA      5520
     CGAGGGCATT AAATCTAGAA TAGGCAAAGT TAGCGCTGGA GTGCCCCAGG GGAGCGTACT      5580
     TGGGCCAATT CTATATATCA TCTACACATC AGATATGCCA TTACCACACA TTGCAACACC      5640
     TCCCAATCCA ACAACAACAG CAGCAACAAT AACAAATACA GAAACGTCCA TAACTAACCC      5700
     ATACAACTGC AGCATGCTAC TGTCAACGTT TGCCGATGAC ACAGTCATAA TGAGCTCTGC      5760
     TGACATACTG CAAACATCAT ACAGTGCAAA TCAAACGTAT CTGCGCCAAT TCACCATTTG      5820
     GTGCAATCGC TGGTGCATCC AAATTAATGA CAGCAAATCA GCTCATGTAG TACATACTCT      5880
     ACGCAATTTA AACAGCCGAA TGAATTACCT GACTCCACGA CTCAATGGGC AAGAAATCCC      5940
     CTCTAAACCA AGGCAAAAGT ACCTAGGTGT CCATCTGGAC CGAAAGCTCC ACATGCAACA      6000
     CCATGTTACG CAGCTACGAT GCCGTCTTAA AGCACTCTAT AATAAACTAG AGTGGCTAAT      6060
     AGGAAACAAA AGCGTACTCT CTGTAGAATG CAAAATCACT ATCTACAAGC AGATGATTGC      6120
     GCCGATATGG AGATATGCTT TGCCGATCTG GGGTGCCATG ATCTCTGACA CACAGCTACG      6180
     CCGAATAGAA TCCACACAGA ACTGGATTCT AAGGAAGATA GTGAAGGCCT CCTGGTGGAC      6240
     TAGAAACAAA GACATACGTG ATACTTACGA CATAGGCACA GTGGACGAAA TATTCCATAC      6300
     TACAAGCAAA AGATTCGCCG ACTCACTTGC TATTCATCCT AATGCCAACG CTCGTAAGCT      6360
     AATCGCAAGT CCGTATGTTC CAATTCGTCT TGATCGGCAA AGGTATAGTC TGCAACTACA      6420
     ACAACATGTT CGCCCTCTAC AGCAACTAGT GCAGCAATCG CAAGAACAAC AACAGCTGCC      6480
     AACTCTGCTT CGCATGGAGC TTGAAGAAGA AGAAGCAAAC TCGCTCAGAA TGCAACAGCA      6540
     GCAGCAACAG CAGACCCCAC AACAACAGCC AGCCAGATTC AGCGAAATGA GGATAAATTC      6600
     GCTAAGAAGG CACTACAGAG AGGGACGAAT TACGCTCGAA GAGCTAAAAC TAGCAATTAG      6660
     GGAACAGCCA TTGGTGATTC AGCAATTAGT ACTGCCTCGC GAGCTGGCTA TTCAAATATA      6720
     CCAGCAGCAA CAACAGCAGC AGCAACAGCA ACAACAGCAG CAGCAACAGC AACAACAGCA      6780
     GCAGCAACAG CAACAACAGC AGCAGCAACA GCAGCAGCAA CAGCAACAAG AGCAGCAGCA      6840
     ACAACAGCAG CAGCAGCAAC ACCAGTACCA ACAGCAGCAT CAGCAACAGC AACAACAGCA      6900
     AATACAGCAG CAGCAACAAC AGCTCGAGGG ACTCCAGCAT CAGCCAAATC AGTCGCCTGA      6960
     CGTCGAAATA GTGCTAGATA CACCACAGCA GCAACAAGAG CAACAACTAG AACGGCCACT      7020
     TCCACAACCT CAGCAAGCCA ATTTACAACA GCAACGGCTA ACTGAGGACG AGCAGCAGCT      7080
     TGAGCACCGA CTTGAAAGAC TCAGGCAGCA ACTTGAGCGC GAGATGGACG AGGCTGCAAA      7140
     TAACGAGCCA ACTCAACAAC AGCGAACACC AGAGCAGCAG CAATCAAACC AACAGCAACA      7200
     CACAATAGCC TTAACTGAAA ATAAAAATAC AAATATTAAT CCAAGCAACT CAGTCTGTGC      7260
     CAATATAACA AATTTTTCTA TTTCACAGAG CATAATAATA GCCCCATACA GCCTCATAAA      7320
     CATTGCCACA GATGCTCCTT GGCAACAAAA TCAGCCCACA ACCACACAAC AGCTCCGCCA      7380
     GCAGCACTCG AACCTTCACC AGCAGCACCT ACAGCAACAA CGGGAGGTAG TGGAGGCGCC      7440
     CAGCAGCAAC AACGCACAGT CAACAGTCAG GGGGGCTAAA AGAAGAAGAA GCAGTTCAAC      7500
     AAGCTGTATT GAACCCAAAA GACGCTCACC TGCAGCTCCT GACAACCAGC AACAGCGGCA      7560
     ACTCCACACT CTACTCGGCA AAAGGCACTC GCAACAACGT CAAGCATGCC TTCGCAGAAC      7620
     ACGGCTGGGT ACATGGCAGC TGCAAATGCC CCACAGGCTG GGAATATGGC TCCTACTCTC      7680
     CTGCTTTGGC ATGCAAACAC ACCATAAGGT GCCCCAGAAG CTTGTGTGGG CACCTCCAGC      7740
     AGACTACGGT CAATCCTCGA CGAACGGCAG ACACCTCCAA ATTGCCAGAA GGCGCCCGTG      7800
     GCACTCCTGG CAGCGGCTCC AACGTCGATG GTCCAATTGC GGGCGGCAAA CACACAGGAA      7860
     GGCCAGGCCG TATAACATAT TAATCCATGA GACCTGAAAT AGATAAATAA TAAGTAAATT      7920
     TGCACCAACT AGAATTATAA ATTCCAACAA ATCCTTAAAT TCGCCCCTCT GGCAAACTAT      7980
     GTTTACAATT TAACTCAATC AATATGTTAA CTCAGCTGTT CATAACGCAA TCGAAAGCAG      8040
     CCCTGATAAC ATTAACAGAG GTATGTAATA ACAGAACCAT TGCAGTAATT GCTCAACTGT      8100
     TCTGAACGCA ATCGCCAACA ACCCTGATAA CGTTAGACAG AGGCACTGTT AATAACAGAA      8160
     ATAGTACCGC CAACGTGCTA AAAATTCAAA TAAGCCTGCT CAAGCATAGT ATTAAGTAAT      8220
     GTTAAATGTA AAAAATAACT GTTAAATGTT TATTTATCGT AATTCGTCAC AATTTTCTTT      8280
     TATGTTGTGA TATGCATGTA AAATTTTGTT AAAATATGTC ATACATGCCA GTAATTTGTC      8340
     AGCTAGTCCG TTTCACAATT AGACCTATTT CGTTCCAATT CTGTCTCATA TATTGCATTG      8400
     GAACTAGAAT TAAGCAATGA AAAAGACAAT AAAATGCGAC TACTAGCTTA ATCGCTAGAA      8460
     GTTCGCCGTA GCGCACGCAT GCGCAGCAAT TTAAAAATTA                            8500
//
ID   HETAVIR    standard; DNA; INV; 6610 BP.
XX
AC   AY369259;
XX
DR   FLYBASE; FBgn0067468; Dvir\Het-A.
XX
FT   source          AY369259:7671..14072
FT   SO_feature      five_prime_UTR ; SO:0000204:1-1274
FT   SO_feature      three_prime_UTR ; SO:0000205:3999..6342
FT   SO_feature      CDS ; SO:0000316:1274-3998
FT                   /protein_id="AAQ75089.1"
FT                   /translation="MSDPNTTPTTHLSAEPTISPGLLSNLSGLLLSPILTMPASMNGL
FT                   LSISVDSLAPATALSPQALISTASETPAQKGQEQKRAAGKETENTVSETTTTSSITAK
FT                   TTATNTNIESIHIPADAQAQLAHFKRLIAQLELDTTPPNSQAADNFTSYYDEHSSSDS
FT                   IVNIMDSDDAPCTPKPAQPLPMSTFRHHTPTSVVATKTSTQVISPTYAAILAGNAANQ
FT                   KPKNSTCISSSSDSSSNNAPGIGGPGGKITTTATTGASHYKLLHPTGKTANQIRKNNA
FT                   RKSNRQNSAISRLSQQDAQRRNQFANRFTLLSESDFEAPDTHQSQQLPAKTNNLAVPL
FT                   QAALSPVKQSTTTTTTPTNTRAALTSIHFATAATAVNATPSNSPDCQQQQQAGAINVS
FT                   APAAKHYKPPQICIQHYNQPDQNGIDSVIAKLNGQNPPIIDYGLKLGGPGILRILPKT
FT                   LETYSKIINVLNTDNSINYNTYQRREERSFRVVVRGIHASTSTDAIRNELTCMGYTIR
FT                   NVYCPKYKNRSGPGTYQPNIFFVELAPDSTKNRSIFEIRNLCKYVVRFEWPKIDGKNL
FT                   PQCHRCQRFNHTARYCRHPARCVKCGNEHLTQTCVKPANVPATCANCGSDHTANYKGC
FT                   PLYLDLLQAKLLSLPNSKNISPNVRQPQPKLQRRQKQPQRQQSAQLQLQQQQQQQKQQ
FT                   QVQLQRQLPKPKLINNKNNKKSKQNGGQIGTQPIQNQKLQTSTPAGVPRKSTTPITNN
FT                   NINTANNANNSNPPTVSSSNSLDPRSRWARIQSLQQQQQQQRQLERPDSVQTREQIIS
FT                   RQRQMLENWSIRQQATSANQPVTQQQSTPMQVDVEQRQLLPSPQQQQLYQTPSSNDLR
FT                   NDILLQMANKQQEQLDGLMGSVLILQQQLQGVLRLGADSTPLAVPWSNSSQ"
XX
CC   Annotation from Elena Casacuberta (6 April 2004).
XX
SQ   Sequence 6610 BP; 2218 A; 1712 C; 1013 G; 1667 T; 0 other;
     TAAATCAATA AATTGCTATA GCTATATATA TTTTCAATTA CTTATTAAAT ATACATATAT        60
     ACCTAGCATA TATATTGCTA CAAACTGTCC GTCTACGGAC AATCATACCC TCTTAGCTAA       120
     AAAGAGAGCA ATTTAATCAA AAATTTATTA CCTATAAATA AATTAATACA TAACCAAAAA       180
     TAACAATTAA CCCTTCAAAT CTCTAAAAAC AAGGTATTAC ATCAACTTTT GCCATAAAAC       240
     TTCAAGCCCA AAGGTGACCA ATCAGATTAA CCTAAAAATT TCTAGCAATT TCTCAGCAAA       300
     AGTTTATGCC AATATATGAC GTGTGTGTGT GTGGGCAATT GTTCTGATTT TTCTTTGCAC       360
     ACCTATACAA TCGCTAAAAT AGCTGCTGTC GCGCAACTTG ACACACACAC GCATACACAC       420
     ACTTATTACA GTTCATAAAT TACACATATA TACATCTATC AAAACATATA CATATATACT       480
     TTCACATACA TATCTACAAC TCCTGTCAAA ACACATATAT AAACAAACAT ATATATCTAC       540
     AGCAAACACA TACAAACTCA CTTATATACA TTACTTCCCC TCTTTTTTGA CGTCCATATA       600
     AGTGACGCGC GCATAGAAAC CTGACGAAGC TGAGAGCAGG CGGAACTGTA GCTAGTCGAC       660
     ATTCTGGTTT GTGAATTGAC TAAATCGGTC AACTTGGTGC GAAACCAAAA GCACACACTC       720
     ACAAACAAAT CACAACAAAG CGCCATTTAG TCGTTTCATC CACCCATCTC CATTTTGCAC       780
     TTTTCCTATT TCATATAAAC TCAACCTTTG CAAAAACCAA CAAAGAGCTC AAGCTTTTAC       840
     ACGTCCCCTT TGTAGGCTGC TCTTAATTTT TCGTAAAGGT TGACACAAAC AAAATCAAAA       900
     CTGGTGCTTC ATCACCAATA AACTAAATAA ATTAAAACTA AATACTTACC TTAATCAAAC       960
     CTATTAAAAA ATTGAAGCTT AATCAGGTGT TTCGCCACCA ACAATATTAA GCTACTATCA      1020
     CACATACACT TACTTATACT CACCTTATCA CACTTCTCAT ATACTTACCT ATACTTACCT      1080
     TATCACACCT TCATATTACA TATATTCATA CTTACCTATA CTTACCTTAT CATACTCATA      1140
     TATAATTATA ATTTCATACC GGTGTGCCAT CACCAATCAC AAACTATATA TAATATATAT      1200
     ACTTACCTCA ACCATATACT CACCGTATAC CAATACCTAC CTTTCACCCA TATTTACCAA      1260
     TTACCACTAT CAATATGTCA GATCCAAACA CTACGCCCAC TACTCACCTG TCCGCCGAGC      1320
     CTACAATATC GCCAGGACTC TTGTCAAACT TATCAGGCCT ACTGCTCTCG CCGATACTGA      1380
     CAATGCCGGC ATCAATGAAC GGTCTACTAT CAATTTCAGT AGACTCATTG GCGCCAGCAA      1440
     CAGCCCTGTC CCCCCAGGCT CTCATATCGA CAGCCAGTGA AACACCTGCG CAAAAAGGAC      1500
     AAGAACAGAA ACGCGCTGCG GGCAAAGAAA CAGAAAACAC TGTTTCGGAA ACGACAACAA      1560
     CATCATCAAT AACGGCAAAA ACAACAGCTA CAAACACGAA TATCGAGAGT ATTCATATAC      1620
     CAGCTGACGC TCAGGCACAA CTAGCACATT TTAAACGCCT AATTGCCCAG CTTGAGTTGG      1680
     ATACTACTCC TCCAAACAGT CAAGCTGCCG ACAACTTTAC CAGCTACTAC GATGAACACT      1740
     CCTCTAGTGA TTCAATCGTA AATATTATGG ATAGCGATGA TGCCCCTTGC ACACCAAAGC      1800
     CAGCTCAACC GCTGCCGATG AGCACCTTTC GCCACCATAC TCCCACTTCG GTTGTTGCTA      1860
     CAAAAACCTC CACACAAGTC ATTTCGCCAA CATATGCAGC CATTTTGGCT GGCAATGCTG      1920
     CAAATCAAAA ACCCAAAAAT TCAACGTGTA TAAGCAGCAG CAGTGACAGC AGTTCCAACA      1980
     ATGCACCCGG TATTGGTGGT CCCGGCGGCA AAATCACCAC CACAGCCACT ACCGGTGCAT      2040
     CTCACTATAA GTTACTGCAT CCCACAGGCA AAACAGCCAA TCAAATTCGC AAAAATAATG      2100
     CACGAAAGTC AAATCGCCAA AACTCGGCAA TTTCTCGCCT ATCCCAGCAA GATGCTCAAA      2160
     GACGCAACCA ATTTGCAAAT CGGTTCACAT TATTATCTGA ATCCGACTTT GAAGCGCCAG      2220
     ATACACATCA GTCCCAACAG CTGCCGGCGA AAACTAACAA TTTGGCCGTG CCGCTACAAG      2280
     CTGCCCTGTC ACCTGTCAAA CAGTCAACAA CTACGACAAC AACTCCAACT AACACAAGAG      2340
     CAGCATTGAC AAGTATCCAT TTCGCCACTG CCGCCACGGC CGTCAATGCT ACTCCTTCTA      2400
     ACTCTCCCGA CTGTCAACAA CAACAGCAAG CTGGTGCGAT CAATGTTTCT GCCCCTGCGG      2460
     CGAAACACTA CAAACCGCCA CAGATATGCA TTCAGCATTA CAACCAGCCA GATCAAAACG      2520
     GCATCGATTC TGTAATTGCC AAATTAAACG GACAAAACCC GCCCATAATT GATTATGGAT      2580
     TAAAATTGGG TGGTCCTGGC ATATTAAGAA TCCTGCCAAA AACTTTAGAG ACTTACTCTA      2640
     AAATCATAAA CGTCCTCAAT ACGGACAATT CAATCAATTA TAACACGTAC CAGAGGCGTG      2700
     AGGAGCGCTC ATTCAGGGTT GTGGTGCGGG GCATTCACGC CTCCACAAGC ACCGACGCAA      2760
     TCCGGAACGA GCTGACCTGC ATGGGCTATA CGATTCGCAA CGTATATTGC CCAAAATATA      2820
     AGAATCGCAG CGGCCCTGGT ACATATCAAC CGAATATATT CTTTGTGGAA TTGGCTCCCG      2880
     ATTCCACAAA GAATCGATCT ATATTCGAAA TCAGAAATCT TTGCAAATAC GTCGTCCGCT      2940
     TCGAGTGGCC TAAAATAGAT GGCAAGAATT TGCCACAGTG CCACCGATGC CAGCGCTTTA      3000
     ACCACACGGC CCGTTATTGC CGCCACCCTG CTCGCTGTGT GAAGTGCGGT AATGAGCACC      3060
     TCACACAGAC TTGCGTCAAA CCGGCAAATG TGCCAGCCAC TTGTGCAAAC TGCGGCTCGG      3120
     ACCATACAGC CAATTACAAG GGCTGCCCCT TGTATCTGGA TCTGCTACAA GCAAAACTGT      3180
     TGTCCCTGCC AAACAGCAAA AATATCAGTC CGAATGTTCG GCAGCCTCAG CCGAAATTAC      3240
     AGCGGCGGCA AAAGCAGCCT CAGCGCCAGC AATCTGCTCA ACTGCAACTG CAACAGCAGC      3300
     AGCAACAGCA AAAACAACAA CAAGTTCAGC TGCAGCGCCA GCTGCCAAAG CCTAAGCTAA      3360
     TCAACAACAA AAATAACAAG AAATCAAAAC AAAATGGTGG ACAGATAGGA ACGCAACCAA      3420
     TACAAAATCA AAAATTACAA ACTAGCACTC CAGCTGGAGT TCCCCGAAAA TCTACCACAC      3480
     CAATCACAAA CAACAATATC AATACGGCAA ACAATGCCAA TAACTCCAAT CCCCCCACCG      3540
     TCTCCTCATC CAACTCCTTG GATCCACGCT CTAGATGGGC GCGGATCCAA AGTTTACAAC      3600
     AACAACAACA GCAGCAACGC CAACTTGAGA GACCTGACTC TGTTCAAACC AGAGAACAGA      3660
     TCATCTCAAG GCAGCGCCAG ATGCTAGAAA ATTGGTCCAT CCGGCAACAA GCCACCTCCG      3720
     CCAATCAACC CGTCACACAA CAACAATCCA CGCCAATGCA AGTTGACGTT GAGCAGCGAC      3780
     AGCTACTACC ATCACCACAA CAACAGCAAC TTTACCAAAC ACCCTCCTCC AACGATCTGC      3840
     GAAACGATAT ACTGCTTCAA ATGGCCAACA AGCAGCAAGA GCAGTTAGAC GGTCTGATGG      3900
     GCTCGGTGTT GATATTGCAA CAACAATTGC AAGGAGTGCT CCGCCTAGGC GCAGACTCTA      3960
     CACCGCTCGC TGTACCATGG TCAAACTCAA GCCAATAATT TGAATGAATT CAGAGCCCGT      4020
     TTTCATTGGC TCATCTACTG CTCAATCAAA ATTAAAATCC TGGAAAAAAT AGCAACTTTT      4080
     ACTTACCTCC AACTTACCTT TTATTAGTTA ATTTCCCAAA CCAAATCTTT ATTTTAGTAC      4140
     TTACCCGTTA CTTACCTCCT TATTATTTTT ACCTACCTTA TTTACTTACC TTTTTAATTT      4200
     ATCCTCAAGC AGCTATTATT TTCCTAAAAA TATACCAACC TCATCACAAA TTGCATTTCT      4260
     CAATGCAACA CAACACAATC ATCAATGCAA TTGTCAACAA GTTGCAAAAT ACAAAAATGC      4320
     CACAACAAAT TGCCAGTCAT GTTCCGCTAT GTGCGCCTCT GTGTCTGCTC GCTCACAACA      4380
     CTCCAGCTTT TCCAATGCTC GAATACAGTG AGCTTATGCA CACACACGCG CACAATGAGC      4440
     GCGCTTCCTA TTCGTCAATG CGCTGGCGCA CACTAAAACA TAAGCAGACG AAACAAGATG      4500
     TCTGTTCCAC ACTTGCCCAC CCCATGACCA ATGGCAACAG AAGCTGCTAT TTGCATCCCT      4560
     AACCGGCCTA CGAGGGAAGA CGGGCAACTT CCTTTTCAAG AAAAGCTCCA GAAATCCACA      4620
     TTTGGCAGCA TCAAACATCA TCACTCCTTT ACACACACAC ACACACACAA TCACATCGAG      4680
     AAAAAGCAAT GAACACAAAC ACAGCACACA ATATGCTTAT CATTGCCTCT TCACACCAAT      4740
     GAATCTGCCA ATTCAAAATT CTACTTACTA AAAACTTCTC AATCTCAACC ATCTTTTTTA      4800
     TCCCGCATCG CAAATATTTA ATCATAGCCA ACACGCATTT GATAACAGCC AGTGCAAATA      4860
     TATTTAAATT ATTGAAATTT AAATGAACTG AGAGAAGGTA CTCGGCTAAA ATAACATCAA      4920
     TTTTCTTATC AACTGCGGTG TTATTTATCT GCTTTTGATG TGGGAAACAG AGGATAGGGA      4980
     GATTTTTTAA ATTGGGAAAA CAAAAAACCA ACAATCAACA CAGGACGGAC ATGACAAATC      5040
     ACAGTTGTGA ATTGTGGAGT GGCCCTGTGT GTTCTCTGTT CATTTGCCAA CCCTATGTCT      5100
     CGGGCAATGC AGACACACAC ACCATACAAT TGGGAACACA CACACACTGT ATATTCATGC      5160
     GCCGAGTCCA ATTCTCTATC AATAAGAAAC AAGAAAACAT TTCTCCTTAT TTCGTACATC      5220
     AAACACAGAC AAATCACAAC GAAAAATTAT TATTTTCATA AACTCCATTA AATAAATTCT      5280
     CTCATCATTT TGCTGTACTC TTATCAATAA TGCTGGCTTA TGGCGAACCA GATTTGCTGA      5340
     CGCCGCACAC CACTCCAATT GTATACTTCT TCTATACACT TGAATTTTTA TTTACTAAAA      5400
     ATATAGAGAC ATATCATTTT AGCTCTTATC ATAAAGTTAA TTTTTTGCAC AAATGGTATG      5460
     AATATTAAGT TGGCAAATTC ATATAATTTT GTAAAACATA CACGACACAC ACAAATTCCT      5520
     AAACATGTAT ATACACATAA ACATATCACA AAACACAAAA ATTTAAAATG TATAGAATTA      5580
     AGGAAGTATA TATCAATAAA CTCTGGAGGG GGGATTGGTT CGGTGTGTGA CGGTGGGAGG      5640
     GGGGATACTT TGTACCGCTG CAGGATAGTG GCCTGTGTGT GGGTGTGCAT ACCCGTGATG      5700
     GTTTGGAGCG GTTGACGAGC ATGAGCTAGT AGGCACCTTT AATGCTGCCT CGCCATGTCT      5760
     CGAGCCCTCC AGGCCACCAC GACCATGCAT ACTCAAACAC TCGCTCGCTC TCTGTGCGAT      5820
     GCGAATGCTC GATGCCCGAC GCTCGGTACT CGGTACTCGG TACACGATGC TCGGTGTCCT      5880
     CGATCCCGTT TCCCATTCGT CTCATCCGAC CCGGTCTCCT GCTCAACCTA AAACAGAAAA      5940
     AATTGAGTCT CTTTTTGGTG CCTGAAGTGA ACGGACGTGC TCGCGGAGAA ATAAAAAGTA      6000
     AAAATCATAT AAATTCGGCA GCGCGCGCCA AAACGAACCG AACATAGTAT ATAGGGACAC      6060
     GATTGCAAAG TGCAAATTGC AATACATATC CCTCGGTTTT TTCATTCGGT TTTTCACTCG      6120
     CTCAATACAG TGGCTTTTTT TTCCTTGTAC ATATATATAG TGCACGTGGC CTGCTGTGAC      6180
     TTTTGCACAA AGTGTCGCCA CGTGGACAAT CTAGAACTTT TGCTTTAGTT GTTCTGCTGC      6240
     GCATCAGACG CTGGCGCACG GCGTGCAAAA ACACAAAAGT GGGTTATGTA TAACAAATAC      6300
     ATAACTGCCT AGGGCCTTAT ATGTACTAAA ATTAACCACT ATAACTCATA CTCTCGTCAA      6360
     TAAATCAATA ATAATTGATA TAACCTAAAA TAAAATTACA TATAAATCAA TAAATTGCTA      6420
     TAGCTATATA TATTTTCAAT TACTTATTAA ATATACATAT ATACCTAGCA TATATATTGC      6480
     TACAAACTGT CCGTCTACGG ACAATCATAC CCTCTTGCTA AAAAGAGAGC AATTTAATCA      6540
     AAAATTTATT ACCTATAAAC AAATTAATAC ATAACCAAAA ATAACAATTA ACCCTTCAAA      6600
     TCTTTAAAAA                                                             6610
//
ID   TARTYAK    standard; DNA; INV; 8444 BP.
XX
AC   AF468026;
XX
DR   FLYBASE; FBgn0026443; Dyak\TART.
XX
FT   source          AF468026:1319..9762
XX
SQ   Sequence 8444 BP; 2822 A; 2187 C; 1737 G; 1698 T; 0 other;
     AAAAAACATA TAAACATACC CACACAATAT AACGACACCA ATGCAACCAA AGCATTAAAA        60
     ACCGAAAAAG CAGCTTCTCC CTCCCACACA TACTTACGCC AGACAAAACC AATAAAGCCC       120
     GCCATAAACG CATTGCATGC CGCCCAAGAC ACAAACCCAA GCCCAGCAAT CAGCGCTGTC       180
     ACTTACACAG ACAAACCCAC AGCTACTCAG AATATTTTTC CTGTCAAAAC TTTTGCAGAG       240
     CTGATTAGAG AAAATGCAAA ACGCTCACCA ACTCCAATGC AAAATCCCCC TCAAGCAAAA       300
     CATGACTCTG CCGCCCTCGG ACGCCCTCCG ACTGCAGCTA GAAAAAATCT AAATAAAACA       360
     CTGATTTCTC CTAAAACTCC TGGGAAGCGC TGTGGGGACT GTCTTGATGA AGGCCTACTT       420
     CAAACCTCTA ACAAAAAGGT TAGAATACGC GACGACTTCT CTGATGATGA TCTGGGGGTC       480
     ACAAACCTAC TCTCTGAAAC ACCCTTATTC AAAAGCAAAG CAGCTATTAA GATTCGGCAA       540
     GACTCGAGAA GAGAATCCCT GCAGAAGTCA GCTGAAATGG ACACAGCTCC AGCAATAAGT       600
     CCCTCAAACG CAGCAGCCGA TCCCGACCTA CCGCCCTGGA AAACTGTTCC AGCTAGCAGA       660
     AAACCACCAT CAATCTTCCT GTCCAATATA CAGCAGATTA TCCCGCTAAT AGAAAAACTA       720
     AACTATAAAG CCGGGGTAAA TAGCTTTACT ACCAAGTCTG AACTTGGCAA CAATATTAGA       780
     ATCCAGGCTA AAACGATGGA CGCCTACAAT GCAATTCAGA ATGTCCTCCT TGAAGCAAAC       840
     ATTCCCCTAC ACTCTCACCA GCCAAAGAAT GCAAAGGGCT TCCAAATTGT AATTAGGCAC       900
     CTCCACCAGT CAACCCCGAC CAAATGGATT GAAAGCCAAC TTCAAGACAT CGGTATAGCT       960
     ACAAAATTTA TCAGGGCAAT GCAGTTTAGG GACACGAGAA ATCCTATGCG CATCCATGAG      1020
     GTTGAGGTTG TACCCAAGGC TGACGGCAGC CATCTTAAGG TCCTGCTAAT AAAATCCCTT      1080
     GGAGGACAAA CGGTCAAGGT TGAAAGGAAA CGGGTATCGA AGGATCCTAC ACAATGCCAT      1140
     CGCTGCCAAT GCTTTGGACA CACAAAAAAT TATTGCAGAA ACCCGTTTAA ATGTATGAAA      1200
     TGTGGCCAGC TGCACGCCAC GGTCTCATGC ACCAAACCCA AAAACCTTCC GGCTACTTGT      1260
     GCAAACTGCA ATGGAAGCCA CGTTAGCAGC TATAAAGGAT GTCCTGTTTT CCAAGAAGCA      1320
     AAGCAAAGAC TATCTATCAA CAAAATTCAA TCCCTTCACT CACAACCCAC CCACCTTCAG      1380
     ACCCCCCGCA ATAAACATCC CTACCCAAAA CCCACCCACA TTCAGACGCC CCTCAATAAG      1440
     CAGCCCTACA CAAACCCCCT CCCTCGCACA TTAGTAAACA ACACAAAACT ACCTGCCAAA      1500
     AGAATCCAAG GAAAGAAGAT ATCGCAAAGG AATCTATCTA TAAATAAACG CTTAAACAGA      1560
     ATCAGGACAT TGGACAGAAA ACCGAGGAAT GAGACAAGCC CGCCGACAAC TAGCAAAAAG      1620
     GCCTTGGCCT CTCTAGAAGA AAGCAGAAAA AACCCAAATA GCGCCCTAAA CCCGGCCAAC      1680
     ACCCATCTCA CTCATTTCCG CCCACCACCA TTAGCACAAA ATATTCCTAA TGACGAATCT      1740
     AAGGAGGTGA GTGGGGAGCA ATACCTTTTA AATCGCATTG AAGGGATGGA AAAGAAGCTC      1800
     AACAACCTTC TTGAAATCGT CACCCGCCTA CTAAGCCAAG GAAAAGACTG TCCAAAATCT      1860
     CCAAAAAATC CTTTCCGAGA TCCAATCTTC GTTTAAATGC TCTTTCTAGT AACATCAGAA      1920
     AGTGACGTCT CCTATGACTC GGGAGTGCAA CAGGGACATC CTTAAAATCG CTTTCTGGAA      1980
     TGCTGGTGGG ATCAACAATA AAATAGATGA GCTTAAGCTG TTCATTCTAA ATATTGATGC      2040
     CCACATAGTC ATAGTCACCG AAACTAGACT AGACAACAAT TCTACCAAAC TAGAGCTGCC      2100
     AGGATATTTC ACATACTTAG CCCAAAATCC TGCCTCTAGC AAGAGAGGAG GAGTCGCCAC      2160
     GATAGTAAAC AGTAGTCTCC GCCACATGGC CTTAGAACCG ATTGAAAAGG AATGCATACA      2220
     GAGTGCCCCA ATAGTATTAC TGCCTGAAAA CAACAAACGC AGCGAAATGA TTGTAATAGC      2280
     ATCTGTCTAC TGTCCGCCTT CGCTAAGCTG GTCGCCCCAC CATTTTACTG ACGTTCTCAA      2340
     TTTTGCTGAG AAAACTATGG GAGGGCAGAC TAAGCTCATT CTATGTGGCG ACTGGAACGC      2400
     AAAACATAGA CAATGGGGTT GTATACGCGC CTGCCAACGT GGCGCCGCAC TCTACGATGC      2460
     AATTCAAGCA GACTCCATGG CTGAAATCGT CGCGACTGGC AGCGCTACAC ATTTCCCGCA      2520
     CGATACAAGG AAAAGCCCGT CAGCAATAGA CTTCTCGATA TGTAAACGGC TTGGCAGGTA      2580
     TGAAAAAAGA ATCTCCTCAA GTGCACACCT ATCCTCAGAC CATCTTCCCA TCTTACTTGA      2640
     GATAAACCTA GATATAAAAA CCATCTCCCT GCAAAAACAA AACAACAATA TCCTCAAGAA      2700
     AACAACGAAC ATTGAGCTCT TTAAGAACGT TCTAGAAAGG AAGATACTTC TAAACACTGA      2760
     GATAAGGGTA GCAGAAGACA TAAATGACGC CATAAACATC TTTATTAAAA ACATCAAGGA      2820
     CTCGGCTGCT GAATCAACTC CCTCCCCAAG AATTCTGATA ACCACAGAAG AAGATATGGG      2880
     CAAGCTAACA GAAATAGTCA TACGCTCACA CTAGACGAAA ACACAAGCAG ATTGCTGGAA      2940
     GAAAAACGTA TACAAAGTAG AATTTTTAAA GCTACTAGAA CGAACGAGGA CAAAACTAAA      3000
     CTAAAAGCAG CTGAAAATCG ACTTAAAAAA GCAATTAAAA TCTTAAGAGA AAAGAGAATC      3060
     AATGAGCAAA TTGAAGGAAT TGACACAAAT AACCCGGACA GAATGAGGAA AATTTGGAGG      3120
     CTGCTAGATG AAGGGAAAAA AATGAATCAA CCCAACTTTC CCCTCAAATT AGAAACCAAA      3180
     AAAGGCCCTA AATGGACTAA AACAATTAAG GAGACAACAG AAGCGTTTGT CTCCCACTTG      3240
     GAAGGAAGAT TCAAGCCAAA TAAAATTGTA CCTGATTACC ACATAGATAA GGTTAACACC      3300
     GGACTAAGAA TAATTAAGGA AAGCATGCTA ACAGAACGAC ATAATCTAAA CAAAAACCCC      3360
     CATAACCAAC CCATTACGCT AAACGAATTA AATGAAGAAA TAAAAAACTT AAAGAATAGC      3420
     AAAGCACCTG GTAAAGACCT TATAACAAAC CAGCTCATAA AAACCCTACC GACTAAAGCT      3480
     ACCCTGTACC TTATCCTAAT CTATAACTCC ATACTTAGAT TAGGATACTA CCCTGAAGCC      3540
     TGGAAACATG CACAGGTAAA AATGATCCTG AAGCCAGGGA AAAGCTCAAA CGAGCCGAAG      3600
     TCATACAGGC CGATTAGTCT ACTCTCGGGA CTCTCTAAAA TGTTTGAAAG ACTACTCCTA      3660
     AAAAGACTTT TCAGGGTAGA TCTATTCAAA AAAGCCATAC CACTGCACCA ATTTGGCTTC      3720
     AGAAAAGAGC ACGGAACTGA GCAGCAAATA GCCAGGGTCA CCCAGTTCAT CCTCGAGGCC      3780
     TTCGAGCGGA AGGAATACTG CTCAGCGGTT TTCCTTGACA TCTCTGAGGC CTTTGATAGG      3840
     GTATGGCACG AAGGCCTTTT ACTTAAATTA GCTAAGATCC TACCTTACAA CCTATACATT      3900
     ATACTGGAGA GCTACCTTAC AAATAGAACG TTCGAAGTTA AAGACCAAGC AGGAGAGACT      3960
     TCGAGAACAG GACAAATAGG CGCAGGAGTG CCTCAAGGAA GCAATCTCGG ACCACTACTT      4020
     TACTCTATCT TCTCCTCTGA CATGCCCCTC CCATATATCT ACCGCCCTTC ACCAACACAA      4080
     AGAATTATGC TCTCAACATA CGCAGACGAC ACTATAGTCC TCAGCTCAGA CACACTAGCA      4140
     ACTGCCACCA CAAGAAACAA CGAAAACTAC CTCAAGACAT TTTCGGACTG GGCGGACAAA      4200
     TGGGGTATCT CAGTAAACGC TGCTAAAACC GGACATGTCA TTTTTACATT AAAAAACGAC      4260
     TTACCTACAA ACTCAATGAA TGTGAAGATC AAGGGTCAAA CAATAAAGAA GGAAGCAGCA      4320
     TCATACCTTG GCGTAACCCT TGATAGCAAG CTAACCCTTA GCTCTCACGT CACAAAGCTA      4380
     TTGGGTAAAT ACTCTACAGC CTACAGAAAA TTGACATGGA TCCTAAACGG AAGAAGTAAA      4440
     CTCCCTACTA AAACTAAGAT ACTGATCCTT AAATCAGTTT TATCACCAAT ATGGCAGTAT      4500
     GCCATAGCAG CTTGGGGTCC CCTTGTGACA GATGCACAGA TAAGGAGGGT CCAGGTTGAG      4560
     GAAAACAGAA AAATAAGAGA CATATGTAGA GCGGGAAGAT ATACGAGAAA CCAAACTATA      4620
     AGGGACCTTT TTGGCGTCAA AACAGTAGAA GAATTCTATC AACAGGCTAT GCACAGGTTC      4680
     TCAGAAACTA TAAAATCGCA CCCAAATATA GCTGTTCGCA GGATTCTCTC TAGGCACTAT      4740
     ATCCCGAACA GACTAGAAAG AAGCAGGCAG AGGTACTTTA AAATGACAAA TGATCATATC      4800
     ACGCAAAAGC AGACTGGACT TACCCTCTCA CCTAAACTCT TAAAAATCCC TGATATAGAT      4860
     GACTGCAGAA CCGTAAAAAA GCGTAGCGAG AGAGAGAAAA TAAGACAAAT GCATCTAACT      4920
     GAACTCCCCA CCTTGCTGAG ACTAGAGGAA GAGGAGGAAG AGCTCAAAAG AATAAAAAAA      4980
     CAGGAAGAAA GGGAAAAAAG AGAAAGGGAA AACCAAAAGT GGCCTCCAGA TAGATGGTGC      5040
     GAATTGGAAA TAAACCGATA TAATAAACAA TATAGAAAGG GCGACCTAAC CAGGCAGGAA      5100
     GTTATAGAAA AATTCAGAGG GCAACCATTA AATGTACAAC GAATAATCCT ACCCGACTAT      5160
     GAAGGGGACA TAAAATTAAA TCAAAACAAA CCAGGACAGG AGCAGAAGGC AGAAATAATC      5220
     AAAACTGGCG GAAGGGGTGG CAAAATATTG AAAAGAGAGG AAAGAAATAT AAAAGGCTAA      5280
     AGGCTAAGTT ACAGGTTACA TAAAAAGGGA AATCTGCTTA TATATACTAT GGTAAAATTA      5340
     ACTTAACTAA TCACCTACTG GTTAACAAAA TAATTATGCC TGCATGGCAC AAGCTGCTTT      5400
     CTCAAATCAT TTCTCCTGAC GCTATTGAAA ATCCATCTTT ACTTTCCAAC CGAGGGACTT      5460
     GCGACTGCGG TCTTTCCGCC TTATTGGCTC CTTATGGATC CATCTGCTGC CGTATTGGGC      5520
     GACACACCAG CGCTCCAACC TAAAAGAGAG ATAACATGTT TTAATTCACT TTCCTTTTCT      5580
     CATAAACTAA ATCACAACAA CACCAACAGC GCATCGGGCG ACTGACAAAA GCATTAGCTC      5640
     ACCAAGTCAG CAACAACAGC AGCAGCAAGA CCAGAATCAG TTGAGGAGGA GGCTTGGTGG      5700
     TGTGCTGAAC ATTTCGCCGC CCACACCCAC CATTTCTGTA GGCCTGTATG ACCCTGAGCC      5760
     CAACGCCGGC ATGGCAAATC CGGTCTTCCT GAGGAGGCGG GGCTCTAGTG TGAGGCGCGC      5820
     TTTTGCCCCA AAAGCAACAA CGACAGCGGC AGTAGGGTCG GCGCCCCCTG CGTGACCGAG      5880
     TCCATCTTAG CAATCGGTCC TTTTGGCGGT GTTATGCCGA CGCGGCGGTC GCGCTTATGA      5940
     GGACTGCCTG CAATGCTTGG CCATGAGACG GCGTCATCAG CAACATTTCA ATCACGCTCA      6000
     ACTGGTTGAC CGGGGGCAAC ATGCTTGCCA TGCAGCAACA ATGGTGCATG CAGTCCAGCA      6060
     TGCAGCAACA ACAACAATAT TGGCAGCAGC AGCATAATGT TTCGCAGCAG ATTCCATCTG      6120
     GCAACTTCCG ACGACCAGAC TCCTCGCTTG GCCCCTGGAG ACTCGCTCTG GAAAAAAAAG      6180
     AAATAAGCAT GGATTAGTTT TTTCTTTCCC TCTAGCTATT GGATTAAATT TCTTTCCTGG      6240
     ACAACCGGCG CCTTCATGCA GATGACGCTG GACTGCGGCG ATTTTTTCCC TCCAGCCACA      6300
     GATGGGAAGC TCACATCATG GCATATATGC GGCATCGTGC TAATCAGCTC CCCCATGCTG      6360
     AACGAGATCT TGATGCGGCG ATGCACTCAC TAGCGAGCAG CGGGAACAGC ATACAGCGTC      6420
     AGCAACAGCA GGAAGAGACT TTGTAGCAGA AGCCTTTCGG CATTCTCCGA CGACCCGACT      6480
     CCTCGATCGG GGTCAGGCAA ATTGTCCTGG ACCGACAAAT TTTCCCGGCG TTTCGTCCTG      6540
     GAATAAGGAA GGAAGCACGG ATTAATTTCT CCCCTTCAGC TTACGACCCT TCTCACCAAC      6600
     AGCAGCAACT ACAACAACAT CGGCAGCAGA CGACTTGCAG CTGCTTGGCT CACCTAATGC      6660
     GACAGCAATA ATCCCGGCAA GGCCAGAAAC GGCACCGAGC AGAAGCACGA CAGGGTGAAG      6720
     AACAACATGC CGCCCACGTC CACCAATCCG GAAGCCCTGC ATTAGGGGTC TGAAGCGCCA      6780
     TTAACTGGAG GATCCGGCAG CGTATGCCTA CGCAGAAGCG GGGCGTCGTA AATCCGGTGG      6840
     CCGGAATAGC GCCTTGAACA GCATGCTGTG TATGTTTGCC CCAAAAGCAG AAACTGCCAC      6900
     AGCAAAGGAA CCGCAAGCAG GATCATCACT CGTGGCAAAC TGGCGTATTC CTGTTGAAGA      6960
     CGCGGGACTG CGGCGCATTC TTCCTTTCCA ACCGGGGGCT TTAGCGCCTG CGGTATTTCT      7020
     GGCTTTCCAC GGCTCCATTT GCTGCTGCAT CTGACGCCTC ATCAGCGCTC CTCCCTGAAA      7080
     GAAAGAGAAT ATGTAGTAGT TTTCTTTCCA TTCCTTACAA TATCTCTCAC CAAACCTCCA      7140
     CGACACAACA ACAGCAGCAG AAACAGGTCT AGCCCACAAT GGCAGCAGCT ACAGCAATCA      7200
     GCAGAAGCAA GGCCGGCAAA AGCAACAACA AAAGCCCTCT CTGAAAGCCC GGATGTGGAG      7260
     ACTGAAGCGC CGGAAACTTG AGGATCCGCC CCCGATGCAC GCCCACCAAC AATAAGCTGG      7320
     AGGAGAAGTT ACTGAAGCAT GGGAAGCAGC ACCAGGGGTC GCATACGCAG TGTCAGGGCT      7380
     TTGCGAACCA GATCGAATGA GGAGAGCCTG GAACAGCATA ACATCAGCGG CAGCAACAAC      7440
     AGCGCCAGCA GGGTCAGCGG CGTCCTGCAT GGCTGTGTCC AAAACAACTC CAATTCAACC      7500
     TGCCTGTATG ATGCAGCGCA CCACCGGCTT TCACAGGGAC CGTCTCAAAC GCTTGCAGGA      7560
     GCCGGTGAAG GCCTGGGCGA AGACATGGAG ACACCAATGC GCGTCCTTTC GCCCCGGCGG      7620
     CAACAGGCTT GCGCATGCAA TAAGAACAGT AAATGCCTCA AATAACAGCA GAAGATACAG      7680
     ACGTCCAAAT TGGGAACACT GACGCCAGCC CTCACCGTGA ACGACTCGAC CTGTGCAGCA      7740
     GCAGCAACCA TCAGCACCCA TGCCCTCACG CATCGGCAGC AGAGGGTGTT TTGGGCCCTT      7800
     GACAATTCCC TGCGACTTGA CTTCTTCTTG GCACCTGGTC AATCATCACG TGCCAGCAAA      7860
     CAGTGGCTTG TCACCCTGGA AGAAAGAAGA CTGGATTAGT TTCTCCCCTT CTAATACATT      7920
     TTGTGTGTTG AAATGCATCA GGCGGCGACA CACTCACCAG CAACAGCAGC AACAACACCA      7980
     GCGGCACCGG TAGCAGGAAA TGGATCCTCA GCAAAAACCA TCGGCACTTT CAGACGTCCC      8040
     GTACTCCTCG CCTGGCCCTG GCCGGTAACA GGGGCTTGTT AGATAGAGAA GACGACGGTC      8100
     ATCCGACGGA CAGCAGCCTG AAGATGGAAG CAGGCCTACG CTGCCCACCT CTCCGATGCC      8160
     TGCAGCAGCA ACGGCAGCGG CTCATAAATG CAAACTGGCG CCAGCCCTCG GCTCTTCGGG      8220
     CTCATGTAGG CGGTGACACA CTCACTAGCA GCTAAAACAG CAACGGCGGA ATTAGCAGAA      8280
     GGCAATGTTT TGCCGCAGCT GCCAGATGGC ATACTCCTAG CTTGGCCCCT GCCCAAACCG      8340
     TATTGGACCG GCAAATGATT CGACAATCCG ATCGAGTCGA CGAATTCGTC TTTTTTCCCG      8400
     GTAACAACAG TATACTGAAA ACTTCCTTAA AAAAAAAAAA AAAG                       8444
//
ID   NEOR1A    standard; DNA; INV; 1757 BP.
XX
AC   AY369259;
XX
DR   FLYBASE; FBgn0013854; Dnet\R1A.
XX
FT   source          AY369259:1..1757
FT   SO_feature      start_codon ; SO:0000318:1..3
FT   SO_feature      CDS ; SO:0000316:<1..1134
FT                   /protein_id="AAF75688.1"
FT                   /translation="VVGSSRLELETKGAQLMSIVGAWGAEAGVAVSTSKTAVMLLKGI
FT                   LSRNRRPMVRFAGANLPYVDNYRYLGITVSERLNYQRHIASLRERLTGVVGALGRVLR
FT                   VDWGVSPRDKRTIYAGLMMPCALFGASVWYRTTDRGVTAKKRLIRCQRLILLGCLPVC
FT                   RTVSTVALQVLAGAPPFDLAAKKLAIKYKLKRDYPLEEGDWLYGQDLADLTSEQKMAR
FT                   LDECMLSEWQLRWDGDVHGRVTYAFSERKFVYLRRDFRFTLRAGFFLTGHGSLNEFLH
FT                   GRALSETPTCTCGAVSEDSLHVLCECPLYADLRDLDGLGVRNLHGVWDVSGVKETRER
FT                   MQLLDAFADAVFTRRRNAQHVQDGQDGLDGPDGQVRRGLPVPS"
FT   SO_feature      three_prime_UTR ; SO:0000205:1135..1757
XX
SQ   Sequence 1757 BP; 402 A; 417 C; 516 G; 422 T; 0 other;
     GTCGTGGGAA GTTCCCGCTT GGAACTGGAG ACCAAAGGCG CGCAGCTGAT GTCCATCGTA        60
     GGCGCTTGGG GAGCTGAAGC TGGAGTAGCT GTATCAACCA GCAAGACGGC AGTCATGTTG       120
     CTGAAAGGCA TTCTTTCACG CAACAGGCGA CCTATGGTGC GATTTGCTGG AGCAAACTTG       180
     CCATATGTTG ACAACTACCG GTACCTTGGC ATCACAGTCA GCGAGCGTTT GAATTATCAA       240
     CGCCATATCG CGTCGCTACG CGAACGGCTG ACTGGAGTCG TAGGGGCTTT GGGACGCGTA       300
     CTGCGAGTCG ACTGGGGTGT CAGTCCTCGC GACAAGCGGA CCATTTATGC CGGACTCATG       360
     ATGCCATGTG CACTCTTTGG TGCCTCGGTA TGGTATCGTA CGACGGATCG AGGTGTAACA       420
     GCCAAGAAAC GTCTCATACG ATGCCAGAGA TTGATCCTGT TAGGATGTCT CCCGGTATGC       480
     CGAACAGTGT CCACAGTGGC ACTGCAGGTG CTTGCTGGTG CTCCCCCGTT TGACTTGGCT       540
     GCCAAGAAAT TGGCAATCAA GTACAAACTC AAGCGTGACT ACCCGCTGGA GGAAGGCGAT       600
     TGGCTGTACG GTCAGGATCT GGCGGATCTG ACCTCGGAGC AAAAGATGGC GCGACTGGAT       660
     GAGTGTATGC TGAGTGAGTG GCAACTCAGA TGGGATGGCG ATGTTCACGG ACGAGTGACA       720
     TACGCGTTTT CCGAACGTAA GTTCGTCTAT CTTAGGCGGG ACTTTCGTTT TACACTCCGC       780
     GCAGGATTCT TTTTGACTGG CCACGGATCG CTGAACGAAT TTCTGCATGG AAGAGCTCTG       840
     AGCGAAACGC CCACATGCAC TTGTGGTGCT GTTAGCGAAG ACTCGCTTCA CGTGCTATGT       900
     GAATGCCCAC TCTATGCAGA TCTTCGAGAC CTCGATGGAC TAGGAGTACG GAACCTACAC       960
     GGCGTCTGGG ATGTATCTGG AGTGAAGGAG ACTCGGGAGA GGATGCAGCT GCTGGACGCA      1020
     TTTGCCGACG CCGTCTTTAC GAGGCGACGA AATGCGCAGC ATGTCCAGGA CGGACAGGAT      1080
     GGACTGGATG GGCCGGATGG ACAGGTGAGA CGTGGGTTGC CAGTCCCGAG TTAATAGCTG      1140
     AAACTGACCT GTGTGGTTGG CGGTCTTAGA ATTCCACCAC AGTGCATCTC TGCTTGTCGT      1200
     ATGAGACGAC TAAATGAGGT ACCTGGATTG TCAGTTCCGG CTGAAAAGCC AAAACTGACC      1260
     CACCCGTGTG TTGGCGGGTC TTAGAATACC AACTCAGTAT GCAACCGCTT GTCGTACGAG      1320
     GCGACTAAGG TGCACCCTTC CTGGATTACC CAGCGTCCGA GCCTATCGGG GCTAAATGGG      1380
     GAGGGGATAC CGATCCCTCG ATTAATTTTT AATTAATCGA ATTCGGAACC ACGGGTTGAG      1440
     ATAGTTTCTC CAAGGCTTCT CATTGAGGTC GGCCCCCTAG TGGGAGTTCG TGGTGGCTGT      1500
     GTATAACGTA GCGTTGCGTT TCAACGCCGG AGAGAAACTG CTAGATGTTT CGGCCCTCAC      1560
     CAAGGGTGAA TGCATACCCG ATGTATGCAT TCTATTGGCA CCTATGAGAT GGAGGCCTCT      1620
     GCTAACATCA CTTAGGGGCG TTAGTTGGCG CTCAAACCAA ACTCGCTGCA CTATCTGCTT      1680
     GCAGAAACGT GTACCGTGGT TGTAATCCCT TGTTGGAAGA CGCCACGTTA AATAAACTGG      1740
     AGAGATCCTT TGGCAAT                                                     1757
//
ID   TAKR1A2    standard; DNA; INV; 1753 BP.
XX
AC   U23198;
XX
DR   FLYBASE; FBgn0013903; Dtak\R1A2.
XX
FT   source          U23198:1..1753
FT   SO_feature      start_codon ; SO:0000318:2..3
FT   SO_feature      CDS ; SO:0000316:<1..1134
FT                   /protein_id="AAA91003.1"
FT                   /translation="ARSISGPFIWNLLMDVLLQRLEPHCAVSAYADDLFLFVDGNSRA
FT                   DLERKGEQLMGIVGAWGSEVGVSVSTSKTAIMLLKGSLSQQRRPTVRFAGTSLPYVIK
FT                   CRYLGILVGERLSFLPHISALRDRLSGVVAGLARVLRVDWGLSSRAKRTIYRGLMMPC
FT                   ALFGASVWYKAVRRGKSLKLLTSCQRTILSGCLPVCRTVSTVALQVLAGAPPMDLDAH
FT                   RSALKFKLRKEIPLDTNDWLHGLDMTGMNWKDKMALLDERLLNEWQLRWDNAITGHVT
FT                   REFFPEAAFVYKRKDFVFTLKAGFLLTGHGSLNAFLHGRTLSTTTACSCGEEDESWLH
FT                   VLYECRLYNELRDLDALGIVQDQGRWIVAGVVETPERMRLLGVFADAAFSRRRTDAAD
FT                   G"
FT   SO_feature      three_prime_UTR ; SO:0000205:1184..1753
XX
SQ   Sequence 1753 BP; 390 A; 418 C; 527 G; 418 T; 0 other;
     CGCAAGGTCC ATTAGTGGTC CATTCATTTG GAACCTTCTG ATGGATGTGC TGCTTCAGCG        60
     CTTAGAGCCA CATTGTGCTG TGAGCGCGTA TGCAGATGAT TTGTTCCTTT TCGTCGACGG       120
     GAATTCCCGT GCTGATCTGG AGCGAAAAGG CGAGCAGTTG ATGGGCATCG TGGGAGCCTG       180
     GGGATCTGAA GTTGGAGTGA GTGTGTCCAC CAGCAAGACG GCAATCATGT TGCTGAAGGG       240
     AAGCCTTTCG CAACAAAGGA GACCGACGGT GCGTTTTGCT GGAACAAGCC TACCGTACGT       300
     CATCAAATGC CGGTACCTTG GCATCCTAGT CGGCGAGCGG TTGAGCTTTC TACCGCATAT       360
     CTCGGCACTT CGAGATCGGC TGTCTGGAGT TGTCGCAGGG CTAGCACGGG TGCTTCGAGT       420
     CGATTGGGGA CTCAGTTCCC GCGCAAAGAG GACCATATAT AGGGGACTCA TGATGCCATG       480
     TGCACTCTTT GGTGCCTCGG TCTGGTACAA GGCGGTGAGA AGGGGTAAAT CCCTAAAACT       540
     CCTCACCTCG TGCCAGAGGA CCATCCTTTC GGGATGCCTA CCGGTATGCC GCACAGTGTC       600
     CACGGTGGCA CTGCAGGTGC TTGCTGGTGC TCCTCCAATG GATCTGGACG CTCATCGGTC       660
     TGCTTTGAAG TTCAAACTAC GGAAGGAAAT CCCCCTGGAT ACCAACGACT GGCTGCATGG       720
     ACTGGATATG ACCGGGATGA ACTGGAAGGA CAAGATGGCT CTGCTAGACG AGCGTCTGCT       780
     AAATGAGTGG CAACTCAGAT GGGATAACGC GATCACGGGG CATGTGACTC GGGAATTCTT       840
     CCCAGAGGCA GCGTTTGTCT ACAAGAGGAA AGACTTTGTC TTTACTCTAA AAGCCGGATT       900
     CTTACTGACA GGACACGGGT CGCTGAACGC ATTCTTGCAC GGCAGGACTC TCAGCACCAC       960
     GACCGCATGC TCATGTGGGG AGGAGGACGA GAGCTGGCTT CACGTATTAT ATGAATGCCG      1020
     GCTGTACAAT GAATTGCGTG ACCTCGATGC TCTCGGAATT GTTCAGGACC AAGGAAGATG      1080
     GATCGTCGCG GGAGTAGTAG AGACCCCAGA ACGGATGCGT CTCCTAGGAG TCTTCGCGGA      1140
     TGCTGCCTTT TCAAGGCGTA GGACGGATGC AGCGGATGGA TGAACCACAG GCGCTGGGCT      1200
     TAGCCCAATC AACTCCTGCT GTGTGGCTAG CGGCGAAGAA TACTACCACA GCTTGTCATA      1260
     GCTTGTCGTA GGAGGCGACT AATATGACAT GGGTGCCCTA TCCGAGCTTG TCGGAGCTTC      1320
     AGGGGTGAGG CCTACCGAGC CTGTAATTTC GGTACCACGG GTTGAGCAGC TGTCCAAGGC      1380
     TGCTCATTGA GGTTGGCCCC CATGTGGAGT ATCGTGGTGG CTGTGGTTGA TACCATATGC      1440
     GGTAGAGCCT CGGTTCGACG TGGAGTTGCG TCATACACTC GGGGTCTGTG ACCCAAAGAT      1500
     CAGTAGGGAT TTAGATAGAT CCCGCTCCTC AGCAAGGGGG AATGCTTGCC CGACAAGTAA      1560
     GCATTCGAAT TGCTACCGGG GTGGTTGCTA TGTACATAGC TATAGCTTCT AGTCCGGGGC      1620
     GTTGGTCTGG CGCTTAACCT AGACACATTG CACTATACAC TCACTTGTGG GTGTATAAGA      1680
     GTGCCGTGGT TGTAATCCCT TCAGTGTGGA ACACGCCACG TTAAATAAGC TTCGGAGGGA      1740
     TCCGATAGAC ACC                                                         1753
//
ID   MERCR1A3    standard; DNA; INV; 3772 BP.
XX
AC   AF015277;
XX
DR   FLYBASE; FBgn0013836; Dmer\R1A3.
XX
FT   source          AF015277:143..3914
FT   SO_feature      five_prime_UTR ; SO:0000204:1..468
FT   SO_feature      start_codon ; SO:0000318:2..2
FT   SO_feature      CDS ; SO:0000316:<469..1786
FT                   /protein_id="AAB94026.1"
FT                   /translation="TEEAQPRSCSARAAMKDALIMPPPDSPPRKIVACYEVSEDSDTS
FT                   LAATITGKGSRSRLLLLPLRLYPLLHLLLSLLLPLLLLLLPMRGHRHPPPTAATVAAV
FT                   PDAKVSSNSVVERMQHIERKLRKAILVEDVPNAVALSVLDLAAKYQELVLDMYGAMKE
FT                   LETERRIRPQPVVTLAATTAAPAAPVAAPRIRKVAETWSAIVTSNNPEETPKQVAERV
FT                   RKEVAPALGVRVHEVRELKRGGAIIRTPSSGEMRRVVANPKFKEVGLDVKQNAASKPK
FT                   VMVRDVDSSITAKQFMNGMWNNHFSGRMSNVVFEKSVKITSKPWTAESGPTVNIQLEV
FT                   DQKALDILEDHERIYVEWFSFRWHTVTPTYACYKCVSFDHRVAQCRMNEEICRQCGQA
FT                   GHRASKCSNPVSCRNCSFKGMPSTHRMLSAACPIYGAVLARVASRH"
FT   SO_feature      start_codon ; SO:0000318:2..3
FT   SO_feature      CDS ; SO:0000316:<1779..3772>
FT                   /protein_id="AAB94027.1"
FT                   /translation="TLIMFRVIQANCGRSRAAVIDLGVRMRDSGVTSALLQEPYVDRG
FT                   GRITGLPAGMRVFSDSRNKAAVIVHQEVVCMPVSSLITEHGVYVSASGNFGSIFLTSV
FT                   YCQFNAELEPYLLYMDAVLLLASRTPVIYGLDANAVSPLWFSKLPERSRGYLNRQRGE
FT                   LLADWIQGSRAGVLNVHSNVYTFDNRRARSDIDVTIVSDSATTWAAYEWSVSEWDLSD
FT                   HNIITIVVTLDPASTVESYAPVPSWKLHSADWRRFGDELRTASMDFPLEQFRAMTSDE
FT                   QVTALRSLVHQVSDAVFGRQQLRAKRRVSWWTAALTDARRELRRARRRLQHARRTHSD
FT                   SATVLASYFRIARKEYERMMLHEKRNWKRYVGEHQRHPWGSVYRICRGRKKCTDLGCL
FT                   RWNNELVVTWAACANVLLHSFFPAAERPVDVPVPPEVPPVLDPIEVDTCIAKVRSRRS
FT                   PGLDGITGDMVKAVCTAIPEHMTTLYTRCLADGYFPTEWKRPRVIALLKGPDKDRSDP
FT                   ASYRGICLLPVFGKVLEGIMVNRIKEVLTDESRWQFGFRPGRCVEDAWSHVVSSVEAS
FT                   AAKYVLGVFIDFRGAFDHVEWDAALRRLSDLGCREVGIWRSFFSDRKASIVSSFGEVN
FT                   VDVTRGCTQGSISGPFIWNILMDVLLHRLETHCTISAYAD"
XX
SQ   Sequence 3772 BP; 842 A; 997 C; 1094 G; 836 T; 3 other;
     CAGTCGCTTT CTGACGCTCA ACGCGAGCGG TTGTGTTTTT CGGCTGCGCG CATCGCAAAT        60
     TCTCGTGAAT TTTGTTGTTG TTGTAAAATC AATTGTTTCG GCTCTTCCTC GAAAAGCAGT       120
     GCGCGTGTAT TGGTGTGCAT ATACAGCAAG CACCGTTACC GTGCGTGTGT ATTAGTGCGC       180
     GTGTCAAGCA AGCACCGTTA CTGTGCnCnG ATTGGCCAGC CAATCAGAAC TGACTGAACT       240
     TTTTGAACTA AATTAATTTT TTGTGTAGCA TACTTTTGTG CGCnGACTAA AAGTAGTGCA       300
     TACTTTTAGC GACGGACAAT TTTCAATAGT GAATTTTTTG TTTAACATAC TTTTGGCGGC       360
     ACGAATAAAA GTAGTGAATA CTTTTAGTGC AGAATTTCCA ATAAGGAAAT AATGGATAGC       420
     GACGCTAGTA GCAGCGCCGC GAGCTCGGTG CACTCTGCGC GTTCGGGTGA ACGGAAGAAG       480
     CGCAGCCGCG TTCGTGCAGC GCACGAGCTG CGATGAAGGA CGCGCTCATC ATGCCACCGC       540
     CGGACTCTCC GCCGCGTAAA ATCGTCGCAT GTTATGAAGT CAGCGAGGAT AGCGACACCT       600
     CCCTGGCCGC AACCATCACT GGTAAAGGTA GCCGCTCCAG GCTGCTGCTG CTGCCCCTAC       660
     GGCTGTACCC GCTGCTGCAT CTGCTGCTGT CCCTGCTGCT GCCCCTGCTG CTGTTATTGC       720
     TGCCGATGAG AGGCCATCGA CATCCGCCGC CAACCGCCGC TACCGTCGCC GCTGTCCCCG       780
     ATGCCAAGGT GAGCTCCAAC TCTGTGGTGG AGCGCATGCA GCACATCGAG AGGAAACTCA       840
     GGAAAGCCAT CTTGGTTGAA GATGTGCCCA ACGCCGTTGC GCTCAGCGTG CTGGACCTTG       900
     CGGCGAAGTA CCAAGAGCTG GTCCTGGATA TGTATGGAGC AATGAAGGAG CTGGAGACCG       960
     AGAGGAGGAT CCGCCCCCAG CCCGTCGTCA CCCTAGCCGC CACTACTGCT GCCCCCGCTG      1020
     CTCCAGTTGC TGCACCCCGC ATCCGCAAGG TTGCGGAAAC ATGGTCGGCA ATTGTGACGA      1080
     GCAATAACCC GGAGGAAACT CCTAAGCAAG TCGCTGAGCG AGTACGCAAA GAAGTTGCGC      1140
     CTGCACTTGG TGTACGTGTA CACGAGGTGC GAGAGCTGAA GCGGGGAGGT GCCATCATCC      1200
     GCACCCCATC CTCTGGAGAG ATGCGTCGGG TTGTGGCGAA CCCCAAGTTC AAGGAAGTTG      1260
     GACTTGACGT GAAGCAGAAC GCCGCTTCAA AGCCTAAGGT GATGGTCCGC GACGTGGACA      1320
     GCAGCATCAC CGCGAAGCAG TTTATGAACG GGATGTGGAA TAACCACTTC TCGGGACGCA      1380
     TGTCTAATGT TGTCTTCGAG AAGTCGGTGA AGATCACATC GAAGCCATGG ACAGCCGAGA      1440
     GCGGACCCAC GGTCAACATC CAGCTGGAAG TAGACCAGAA GGCACTGGAT ATCCTGGAGG      1500
     ACCATGAGAG GATCTACGTG GAGTGGTTCT CTTTCCGCTG GCACACCGTC ACGCCGACGT      1560
     ACGCTTGCTA CAAGTGCGTC AGTTTTGACC ACCGAGTAGC ACAGTGCAGG ATGAACGAGG      1620
     AGATATGCCG GCAATGCGGA CAAGCCGGAC ACCGCGCGTC GAAGTGCAGC AACCCTGTGT      1680
     CCTGCAGGAA CTGCAGCTTC AAGGGCATGC CGTCAACGCA CCGTATGCTT TCGGCAGCGT      1740
     GTCCGATATA CGGAGCTGTG CTCGCCAGGG TGGCCTCTAG ACATTAATAA TGTTTAGAGT      1800
     CATCCAGGCA AACTGCGGCC GCAGTAGAGC TGCCGTAATT GACCTTGGAG TCCGGATGAG      1860
     AGACTCGGGG GTCACGTCTG CGCTGCTCCA GGAGCCATAT GTTGACCGTG GAGGAAGGAT      1920
     CACCGGATTA CCGGCAGGCA TGCGAGTGTT CTCCGACAGT CGGAACAAAG CCGCTGTGAT      1980
     CGTACACCAG GAGGTCGTCT GCATGCCTGT CTCATCGCTC ATCACCGAGC ATGGCGTATA      2040
     CGTGAGTGCG TCGGGAAATT TCGGCTCAAT TTTCCTCACC TCCGTATACT GCCAATTTAA      2100
     CGCAGAATTG GAACCATACC TGCTGTATAT GGATGCGGTG CTGCTGCTGG CCAGCCGCAC      2160
     GCCCGTCATC TATGGCCTTG ATGCGAACGC AGTATCCCCC CTGTGGTTCA GTAAGCTCCC      2220
     CGAGCGCTCT CGGGGCTACT TGAACAGGCA GCGGGGTGAA CTGCTAGCTG ACTGGATTCA      2280
     GGGCAGTCGA GCCGGCGTGC TTAATGTCCA CAGCAATGTG TACACGTTTG ATAATCGCAG      2340
     GGCGAGGAGC GATATCGACG TCACTATCGT CAGTGATTCA GCGACTACGT GGGCTGCGTA      2400
     TGAGTGGAGC GTAAGCGAGT GGGATCTGAG TGATCACAAC ATCATCACTA TTGTTGTGAC      2460
     TCTCGATCCG GCAAGCACAG TTGAGAGCTA TGCTCCTGTG CCCTCGTGGA AGCTCCACAG      2520
     TGCTGACTGG CGGCGTTTCG GTGATGAGCT TAGGACTGCA TCGATGGATT TTCCTCTGGA      2580
     GCAATTTCGC GCGATGACAT CAGACGAACA GGTGACTGCA CTTCGCTCCC TAGTACATCA      2640
     GGTGAGCGAC GCTGTGTTTG GACGACAGCA ATTGCGTGCC AAACGTCGTG TGAGCTGGTG      2700
     GACTGCCGCT CTCACTGACG CACGCCGCGA GCTCAGGAGA GCCCGGCGCC GGCTGCAGCA      2760
     TGCTCGTCGC ACTCACAGCG ATAGTGCTAC TGTCCTGGCC TCGTATTTCA GGATTGCCCG      2820
     AAAGGAATAC GAGAGGATGA TGCTGCATGA AAAGAGAAAC TGGAAAAGGT ATGTCGGCGA      2880
     GCACCAAAGA CACCCCTGGG GGTCTGTCTA CAGGATATGC CGAGGCCGCA AGAAGTGCAC      2940
     CGATCTCGGA TGCCTTCGGT GGAATAACGA ACTGGTCGTA ACCTGGGCAG CCTGCGCGAA      3000
     CGTCCTGCTC CACAGCTTTT TCCCTGCTGC GGAGAGGCCA GTGGACGTTC CTGTTCCACC      3060
     CGAAGTGCCC CCAGTACTCG ACCCGATTGA GGTCGACACA TGCATCGCCA AGGTTCGGAG      3120
     CAGACGCTCA CCTGGCTTAG ATGGCATCAC TGGGGATATG GTTAAAGCGG TTTGCACTGC      3180
     CATCCCGGAG CACATGACAA CGTTGTACAC CCGTTGTCTG GCAGATGGGT ATTTCCCCAC      3240
     TGAGTGGAAG CGCCCCCGTG TGATTGCGCT TCTCAAAGGC CCCGACAAGG ACAGGAGCGA      3300
     TCCAGCGTCC TATCGGGGCA TCTGCCTGCT GCCTGTTTTT GGCAAAGTAC TGGAGGGGAT      3360
     CATGGTAAAC CGTATAAAGG AGGTGCTCAC GGATGAAAGT CGATGGCAAT TCGGCTTTCG      3420
     TCCCGGACGC TGCGTCGAGG ATGCCTGGAG TCATGTGGTG AGCAGTGTTG AAGCCAGCGC      3480
     GGCTAAATAC GTGCTCGGAG TCTTCATTGA CTTCAGAGGA GCTTTCGACC ACGTCGAATG      3540
     GGACGCAGCA TTACGCCGAC TATCGGATCT TGGATGCAGG GAAGTTGGGA TCTGGCGCAG      3600
     CTTCTTTTCG GACCGAAAAG CTAGCATCGT CAGCAGCTTC GGCGAAGTCA ACGTAGATGT      3660
     AACCCGTGGC TGCACGCAGG GGTCCATTAG TGGTCCATTT ATTTGGAATA TATTAATGGA      3720
     TGTCCTCCTG CATCGCCTGG AAACGCACTG CACGATCAGT GCATATGCTG AC              3772
//
ID   NETR1B    standard; DNA; INV; 2038 BP.
XX
AC   AF248068;
XX
DR   FLYBASE; FBgn0013854; Dnet\R1B.
XX
FT   source          AF248068:1..2038
FT   SO_feature      three_prime_UTR ; SO:0000205:1078..2038
FT   SO_feature      start_codon ; SO:0000318:1..3
FT   SO_feature      CDS ; SO:0000316:<1//1077
FT                   /protein_id="AAF75689.1"
FT                   /translation="VEGQSRAEIEALAGAHLRTVCDWGNSVGVSLAMDKTTTMLLKGR
FT                   LSASRHPSIGLNGAFLRYVTEVKYLGITFGERMCFTPHFTGLKRRLLGVVGQVRRILR
FT                   NEWGLSRRAVRTIYNGLFVACATYGSSVWCDAVTTVVGRKKVLACQRVTMMGCMPVCR
FT                   TVSTEAMQVLLGVPPLDLEVRRRAVLFKVKRRIPLLQGEWLADRNVESLGLSVCKKLL
FT                   DECVMSDWQVRWDTCLNGRDTYRYIRDVTFVGSRPDFGFNLSLGFLLTGHGSLNAFLH
FT                   QRRLSDTQECHCGLSEETWEHVLCECPSYEDLRSLSAFGVRQVRGGFDVSQALSTSDR
FT                   VRLLNEFARAAFARRRVLTHQGIV"
XX
SQ   Sequence 2038 BP; 429 A; 407 C; 612 G; 590 T; 0 other;
     GTTGAGGGGC AGTCGCGCGC TGAGATTGAG GCACTTGCGG GGGCGCATTT GCGCACTGTA        60
     TGCGATTGGG GCAACAGTGT TGGCGTTAGC TTGGCCATGG ACAAGACGAC GACAATGCTG       120
     CTCAAGGGCA GATTGTCGGC CAGTCGACAT CCATCTATTG GTTTGAATGG CGCCTTCTTA       180
     AGGTATGTGA CTGAGGTTAA ATACCTTGGC ATTACCTTTG GTGAGAGGAT GTGTTTCACT       240
     CCTCATTTCA CCGGTCTCAA ACGCCGGCTG CTTGGAGTGG TTGGACAAGT GCGTCGTATT       300
     TTGCGGAATG AGTGGGGCCT CAGCAGGCGT GCCGTTCGCA CCATATACAA CGGTCTGTTC       360
     GTTGCATGCG CAACGTATGG CTCGTCTGTG TGGTGTGATG CGGTTACGAC TGTTGTTGGT       420
     AGAAAGAAAG TGCTGGCTTG CCAGAGAGTG ACAATGATGG GGTGTATGCC AGTGTGCCGC       480
     ACTGTCTCTA CTGAGGCGAT GCAGGTTCTA CTGGGGGTTC CACCTCTTGA CTTGGAAGTT       540
     CGGCGTCGGG CCGTTCTTTT TAAGGTTAAG AGGCGGATAC CATTGCTGCA GGGTGAATGG       600
     TTAGCGGATA GGAATGTGGA GAGTTTAGGG CTTAGTGTGT GTAAGAAGCT GTTGGATGAG       660
     TGTGTTATGT CTGACTGGCA GGTCAGATGG GACACATGTC TGAATGGGCG GGACACTTAC       720
     CGATACATTC GTGATGTCAC GTTTGTGGGT AGCCGACCGG ACTTTGGTTT TAACCTAAGT       780
     CTCGGGTTCT TGTTGACTGG TCACGGGTCT CTTAATGCTT TTCTGCATCA GAGGCGTCTC       840
     AGTGACACAC AGGAATGCCA TTGTGGCTTG AGCGAGGAGA CATGGGAACA TGTTCTCTGT       900
     GAGTGTCCTT CGTACGAAGA CCTTCGGAGT CTGAGTGCGT TTGGTGTGAG ACAGGTTAGG       960
     GGCGGGTTTG ACGTCAGTCA AGCTCTCTCC ACAAGTGATA GGGTCAGATT GTTGAATGAG      1020
     TTCGCACGTG CTGCTTTTGC CAGACGGCGA GTATTAACTC ATCAGGGAAT TGTATGAATC      1080
     GGTTGAATGG GTTGGTATTT CGATTGTGAG TTTAAATGGA TTGACTGGTT ATTGGGGTAT      1140
     ATGTATGTTG ATGGTTTGGA TCTGGGGTAC GAATGGTGGG GATTTGAATC AGAATGATGA      1200
     ATGGTTTGTA TGGATTGCTG GCTTTGTGTT CGACGCAATG GGCCACCAGT CCCGAAGTTT      1260
     CATGGAACTT TACTGGTAGT AGCCTTCGGG TTACAGTCTT GACCAGAGGA CGTGTCTGGT      1320
     ACCACGGGCT CTTTGGGGTC ACAGAGGCGG TCTCAGCTCT CTGCCCATTT AGCTAAATCC      1380
     TTCGGGATTG TTGGGGGCAT ATGCTGGCCG TTCTTTTGAA CGCTTTGATC TTGTATCAAT      1440
     TATATTAATG CCACGTCTTG TGGAAGAGGT AGGAATAGAC CTCGCTCCTA ACAGGGAGAT      1500
     GGTATGACCA TGAGCATATC ATCGACTGTG CCATCTGAAA ACTGATGTTA TCAGTTTTTC      1560
     ATTCCTATTC CTTACAGCTA TGCTCATCTT TCTTACATTG GGCCACCAAC CCGTAACTGT      1620
     TTTGGAGTTA AAATTGGAAG TGTCCTTCGT GGCACGAAGC TTGACCGGAG CTTTAATTCT      1680
     GGTACCACGG GTGACCAGGT GCCCACGGAA TTTATTCCGT TCTGGTCTTT GGTTGCGGCC      1740
     CTTCGGGGAG TATCGTGGTG GCTGTGGTTT ACCGTCCAAA TGCGGACAGA GCTTAGGCTC      1800
     GACGTGGACC TGCGTTATAC AACCGGGCGC TGGACCACCA TAGTTCAGTA GAGGTTTTAG      1860
     GTAGGCCTCG ATCCTCACCA AGGATGTCGT CACGACCAAA CAGTAGTGAG ACAATTGGCA      1920
     CTTGTGGTTC GCCATGAGGG CGCTGATTGA CGCTTAAATT AATCCAGTGA ATGCACCGTG      1980
     AATGCACCGT GAAATTAAGC CAATGTGGCA GGAGTTCACG TAAACACACC GACTTTCA        2038
//
ID   GEM    standard; DNA; INV; 1730 BP.
XX
AC   AJ131629;
XX
DR   FLYBASE; FBgn0026463; Dsub\GEM.
XX
FT   source          AJ131629:1..1730
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..128
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:982..1137
XX
SQ   Sequence 1730 BP; 459 A; 368 C; 400 G; 503 T; 0 other;
     ACTACATCTG CAACTTAGCG GTTATTTGTC AAATTTTACA TTTTTTCTTC ATCTGTCATC        60
     TACATCAACA ACACTACTCA CGCCAACACG CTCCTTTAGC TCGCCACCCT CCCCTAGAAA       120
     CACACACTGC AGAGTCAGGG CAGAGTCGCG GCAGAGGCAG CGGCAGAGAC GTGTCAGGGG       180
     CAGAGGCCAA TAAACTGAAG TATCTTTTGG GGGCTGCTTT TGTTCTCAAA AGTATAGCAT       240
     ACTTTCAGGC TGAAAAGTTC CCAATTACAA AATAGCGTAG GACAGCCATA TCCTGCAGTC       300
     CTTGTGGTCC TTGATGGACT CAAGCGATAC AGGAGACTCG TACCTTCGCC AGGAGGCATG       360
     CCATGTCCTG ATCCGACAGG AAACAGCCGA GTTATAGCGT TGAAGGGGAT TATATAGAAA       420
     AACAATATTC AAATGGCATT ATCCTTAATG TCCTAGCACC CGAAGTGATC CGGGACATTT       480
     TCCCGATCCC GAGGAGGCGT GACATGTCCT TTTTCGACAG GAAACAGCTG AGCTATAGCC       540
     TTGTAGAGAT TAAAAAGAAA AAACAACGTG AAAATGGCAT TATCCTTAAT GTCCTTGCAC       600
     CCGAACTGGT CGCAAAGGAT CCAGGACATT GTGCCGATCA CGAGGGGGCG TGGCACATCC       660
     TGGACGGACT ACAAATAAAG GAGAAAACAA CAAAACAAAT CTCTCCTGTT ATTTTTGTCA       720
     AATTTTGACA GTCACCTCTT TGCACAGTGG CGCCCACACG ATGAAGACGG TTATTTCTGG       780
     AACTAAAATA ACGTAGTTCG AGAATTGGCC GATCTGTGTT GGGACGCCAC TGTGAACTTT       840
     TGAAATTGCT TCTAATTTTA GTTTCTTGGC GACTGAAAAA TGAATTGCGG TTTCATAGCA       900
     TCCAGATTTT GACACAGTGA AAAAACATGG AAACCAGTTA CCTTCTGCTG ACTTCTGTTC       960
     GCCTGGTACT TTGTCTGAAA AGGACAGACA GACATGGCTC AATCGACTCG GCTATTGATG      1020
     CTGATCAAGA CTATATTATA CTTATGGGGT CGGAAACGTT TCCTGCTGTG CGTTACATAC      1080
     AACCGTTATC CGCACAAATA CAATATACCC TATTTACTCT TCGAGTACCG GGTATAATGA      1140
     ACTAATTTAG CGGAATGTTC GTGTTGAGTG GGTGGCTGAT GATGTGGCTG TGACGTCATG      1200
     GCCATAAGGT TAACAGCCCA CTTAGCATTA TGCGGCTATT TGGTAATGTG CCACCCAATA      1260
     ATAGACCAAC GAAATTGGCC CAACTGACCT TACGCTGCTC TTCGATTGCA ATTGGCTTTT      1320
     ATTTCTCTCC TTCCACAATT GTTTGCTTAC TTTGTGTGTG TGTGTGTGTG TGTGTGTGTG      1380
     GTGTGCCTTG AAATTGGTTA ATAAATTATT AAAGCCTTAC CGACTAAGAG GGTCATGACT      1440
     TATGGTTTAG TTCCTAACTT AAAAGTAGGC GTATGCCACA GCTAACACTA ATTCTAGAGG      1500
     AGCTGACGGC AACTGCGGTT AAAACAATAG TAGCCCGGTC GGGCCTTTAA TTATTAATTT      1560
     CCTGGTGCAT TTCATTTTTG TAATGCACTT TTTTTGGGCG CTACTTCTAT TACTTTGACC      1620
     GCAGTGTCCG GCCCTGTGGG GTTCTGTGGG ATTGTGTATC GATTAGCTTA TGGCACGAGT      1680
     GGGTTAGTGT GGGGCCAAGT ATTTGGATTA GTGCAGTGTG TGTTTCTAGG                 1730
//
ID   VIRUVIR    standard; DNA; INV; 6564 BP.
XX
AC   AY369259;
XX
DR   FLYBASE; FBgn0067460; Dvir\Uvir.
XX
FT   source          AY369259:1107..7670
FT   SO_feature      five_prime_UTR ; SO:0000204:1..1230
FT   SO_feature      three_prime_UTR ; SO:0000205:3907..6564
FT   SO_feature      CDS ; SO:0000316:1231..3906
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /protein_id="AAQ75088.1"
FT                   /translation="MIGLRIGIWHANGLSNKTDELEQFIIRHNVDLMLISETRFNFNS
FT                   RVQIPGYSIITANSPQTHLCIGGAAILISNHIEYQALPGISLPQLQCAIVRLRTDLGG
FT                   ANIASCYWPPNHAVLADDYVCLFNQLGENFLIGGDWNAKHRLWGNMRRCPRGSILANI
FT                   LMDSNKYNVLTTAEPTHFPSNSNRPSVLDFGIYAGISSHRLAISRVTELHSDHLPLLV
FT                   QLKITINGQSLWNNPNLIHRSRPRRRNRHRLLTERSNLEIFHQKLESSINLNIEIDCI
FT                   NDIDDMLENFMSKLHIAAEASNSRSAMASIIPPHQNSSNNTLNNENNNNVNLDLSSPQ
FT                   PLPLSAFIRTDEHRELMRLKRRLRKRWARTRQLDHWLEWQRVGRQLANQLEQQRRDYV
FT                   DYVLSNADPQKKGAFNLWHATKYLKRQPHAQPSVRNLNGHWCQSAEEQAEAFADELQA
FT                   RFTPFNLAPSGQCERVKRTLNQQVNLYDNTLNAINPQYPILSSHIRHVTLCELNTYIG
FT                   HLQMRKAPGLDQIDNYLIRSLPQKARLFLLLLFNGMLRLRYFPSAWKCAAVRMILKSG
FT                   NRSAANLNSYRPISLLSTISKLFEKVIYERLNDELQSPLESESELECSRVIPNHQFGF
FT                   RSGHGTIQQVHRIVEHINNSFERGHCTSGAFLDLQQAFDRVWHDGLLFKLRTHTSEPL
FT                   YQLLKSFLSNRSFCVLSTNPTTNGNRGADACHSTLRPMVAGVPQGSVLAPLLFNIFVS
FT                   DMPCIATHIQQVFQPPPGQTNTSIIGLTATYADDTAFLCSAMNAVVATTILQGHMHRF
FT                   VKWANNWNIQINDNKSVHIIFTLRRQIANAGSLTTQLTINNNIIPAKSYVKYLGLNLD
FT                   KKLNWARHARLQHKLCAKNCSNTNGYYLPANPDYH"
XX
SQ   Sequence 6564 BP; 2169 A; 1676 C; 1040 G; 1679 T; 0 other;
     AAATCAATAA ATTGCTATAG CTATATATAT TTTCAATTAC TTATTAAATA TACATATATA        60
     CCTAGCATAT ATATTGCTAC AAACTGTCCG TCTACGGACA ATCATACCCT CTTAGCTAAA       120
     AAGAGAGCAA TTTAATCAAA AATATATTAC TTATAAATAA AATAATACAT AATCAAAAAT       180
     AACAATTAAC CCTTCAAATC TATAAAAACA AGGTATTACA TCAACTTTTG CCATAAAACT       240
     TCAAGCCCAA AGGTGACCAA TCAAATTAAC CTAAAAATTT CTAGCAATTT CCAGCAAAAG       300
     TGTTGTGCCA ATATATGACA TGTGTGTGTG TGGGCAATTG TTCTGATTTT TCTTTGCACA       360
     CCTATACAAT CGCTAAAATA GCTGCTGTCG CGCAACTTGA CACACACACG CATACACACA       420
     CTTATTACAG TTCATAAATT ACACATATAT ACATCTATCA AAACATATAC ATATATACTT       480
     TCACATACAT ATCTACAACT CCTGTCAAAA CACATATATA AACAAACATA TATATCTACA       540
     GCAAACACAT ACAAACTCAC TTATATACAT TACTTCCCCT CTTTTTTGAC GTCCATATAA       600
     GTGACGCGCG CATAGAAACC TGACGAAGCT GAGAGCAGGC GCAACCGTAG CTAGTCGACT       660
     TTCTGGTTTG TGAATTGACT AAATCGGTCA ACTTGGTGCG AAACCAAAAG CACACACTCA       720
     CAAACAAATC ACAACAAAGC GCCATTTAGT CGTTTCATCC ACCCATCGCC ATTTTGCACT       780
     TTTCCTATTT CATACAAACT CAACCTTTGC ATAAACCAAC AAAGAGCTCA AGCTTTTACA       840
     CGTCCCCTTT GTAGGCTGCT CTTAATTTTT CGTAAAGGTT GACACAAACA AAATCAAAAC       900
     TGGTGCTTCA TCACCAATAA ACTAAATAAA TTAAAACTAA ATACTTACCT TAATCAAACC       960
     TATTAAAAAA TTGAAGCTTA ATCAGGTGTG TCGCCACCAA CAATATTTAA GCTACAATCA      1020
     CACATACACT TACTTATACT TACCTTATCA CACCTTCTCA TATACTTACC TATACTTACC      1080
     ATTATCACAC CTTCATATTA CATATATTCA TACTCACCTC ATCACACCTT CATATCTTTT      1140
     ATATTTACGC CCTATAAATA TAAATTTATC TCTTTCTGGT GTACCATCAC CAAAAACCAT      1200
     ACTTTACTTA CCTTCACACA AACTGCTCGC ATGATTGGCC TCCGTATTGG CATTTGGCAT      1260
     GCCAATGGTT TGTCAAACAA AACTGACGAG CTAGAGCAAT TTATAATACG TCATAATGTC      1320
     GATCTAATGC TTATAAGCGA GACTCGCTTC AACTTCAACT CTCGTGTCCA AATCCCTGGA      1380
     TACTCCATCA TAACGGCCAA CTCACCCCAA ACTCACTTAT GCATTGGTGG TGCAGCCATC      1440
     CTAATCTCAA ACCACATCGA ATATCAAGCT CTTCCAGGCA TATCACTGCC ACAATTACAA      1500
     TGTGCTATTG TGCGCCTCCG TACAGATCTG GGTGGTGCCA ACATTGCGTC CTGCTACTGG      1560
     CCCCCCAATC ACGCAGTCTT AGCAGACGAC TATGTCTGCT TATTTAACCA ATTGGGTGAA      1620
     AACTTTCTGA TTGGAGGGGA TTGGAATGCC AAGCATCGCC TCTGGGGCAA CATGCGACGT      1680
     TGTCCTCGTG GCTCGATCCT TGCAAACATT CTAATGGACT CCAACAAATA TAACGTACTC      1740
     ACAACGGCTG AGCCAACACA CTTCCCATCT AATAGCAATC GTCCAAGTGT ACTCGACTTT      1800
     GGCATCTATG CAGGTATCTC GAGTCATAGG CTTGCCATAA GTCGAGTCAC AGAGCTCCAT      1860
     AGCGACCATC TGCCCTTGCT AGTCCAACTC AAAATCACCA TTAACGGTCA AAGTCTATGG      1920
     AATAATCCTA ACCTAATTCA TCGGTCACGC CCCCGCCGGC GAAACCGTCA CCGTCTACTC      1980
     ACCGAACGCT CAAACCTGGA GATTTTTCAT CAAAAATTGG AATCATCCAT CAATCTCAAT      2040
     ATTGAGATTG ATTGTATAAA TGACATCGAT GATATGCTCG AAAATTTTAT GTCCAAGCTG      2100
     CACATTGCAG CCGAAGCGTC AAATTCTCGA TCAGCCATGG CATCCATTAT ACCCCCGCAT      2160
     CAAAACAGCT CCAATAACAC ACTCAATAAC GAAAACAATA ACAATGTCAA TCTCGACTTA      2220
     TCGTCACCTC AACCATTACC ACTGTCCGCT TTTATCAGAA CAGACGAACA TCGCGAATTG      2280
     ATGCGACTAA AACGCCGTCT CCGTAAACGC TGGGCACGCA CGCGTCAACT TGATCACTGG      2340
     CTTGAATGGC AGCGGGTTGG CCGACAACTG GCCAACCAGC TTGAACAACA ACGCCGTGAT      2400
     TACGTTGACT ACGTGCTGAG CAATGCAGAC CCTCAAAAGA AGGGCGCCTT CAACCTGTGG      2460
     CATGCCACAA AATATTTAAA ACGACAACCC CATGCTCAAC CCAGTGTTCG CAACCTCAAC      2520
     GGTCACTGGT GCCAGTCTGC CGAAGAGCAG GCTGAAGCAT TTGCCGATGA GCTACAAGCA      2580
     CGTTTCACAC CATTCAACCT TGCCCCATCA GGACAATGCG AACGTGTGAA GCGCACACTC      2640
     AATCAACAAG TCAACTTATA TGACAACACT CTAAACGCAA TCAATCCTCA ATATCCCATT      2700
     CTATCATCAC ACATACGCCA TGTAACACTA TGCGAGCTAA ATACTTACAT TGGGCATCTA      2760
     CAAATGCGTA AAGCACCGGG GCTCGATCAA ATTGATAACT ATTTGATCAG GTCCTTGCCT      2820
     CAAAAAGCCA GACTTTTCTT GTTGCTACTA TTCAATGGCA TGCTTCGACT ACGGTATTTT      2880
     CCATCAGCAT GGAAATGTGC CGCCGTCCGG ATGATATTGA AAAGTGGCAA TCGGTCAGCT      2940
     GCAAACCTCA ACTCTTACCG GCCAATAAGC CTATTATCTA CGATCTCGAA ACTATTTGAG      3000
     AAAGTGATAT ATGAGCGGCT AAATGACGAA TTACAATCTC CACTAGAGAG CGAATCTGAA      3060
     TTAGAGTGCT CCAGAGTGAT CCCGAACCAT CAATTCGGTT TCCGCTCTGG TCACGGCACC      3120
     ATCCAACAAG TGCATCGGAT TGTCGAGCAC ATAAACAACT CATTTGAAAG GGGCCACTGC      3180
     ACCTCGGGAG CTTTTCTCGA TCTGCAGCAA GCTTTTGATC GTGTCTGGCA TGACGGTTTA      3240
     CTATTCAAAC TGCGCACACA CACGAGTGAA CCCCTCTATC AATTACTCAA ATCATTCCTA      3300
     TCAAATCGTA GTTTCTGTGT ATTAAGCACA AATCCGACAA CAAATGGCAA CAGAGGTGCC      3360
     GACGCCTGCC ACTCGACACT ACGACCAATG GTGGCCGGTG TGCCGCAGGG CAGCGTGCTG      3420
     GCTCCACTAT TATTCAATAT ATTCGTCTCA GACATGCCAT GCATTGCTAC GCACATACAA      3480
     CAAGTGTTCC AACCGCCGCC CGGCCAAACA AACACCAGCA TAATTGGTCT AACAGCCACC      3540
     TACGCCGATG ACACAGCATT CTTATGCAGT GCCATGAACG CAGTGGTGGC CACCACCATT      3600
     CTGCAGGGTC ATATGCATCG ATTTGTTAAA TGGGCCAATA ACTGGAACAT TCAAATCAAT      3660
     GACAACAAAT CGGTGCATAT TATCTTTACC CTAAGGCGCC AGATTGCCAA TGCTGGCAGC      3720
     CTAACAACAC AACTAACAAT AAACAACAAT ATCATACCGG CCAAGAGCTA TGTCAAATAT      3780
     CTGGGTCTGA ATTTGGACAA AAAATTAAAT TGGGCACGTC ATGCCCGTTT ACAGCACAAA      3840
     TTGTGCGCAA AAAACTGTTC AAACACAAAT GGCTACTATC TGCCAGCCAA TCCAGATTAT      3900
     CATTAAAAAA CAAATTGCTT ATTTATCGAC AGATCATAGC CCCCACCTGG CACTACGGCA      3960
     TTTGAACTCT ATGGCTGTGC AGCTGACACG CATCTGCGCC GTCTACAAAC TGCACAGTCG      4020
     CGAGCTCTTC GCCTCATTAG CGGTGCACCA TATTATATTA CAAATCGCAC ACTGCACCGA      4080
     GTAATGAAAG TGCCATCAAT ATGGGACCAG CTCAATCTAA ACGCCAGTCG GCACAACGAC      4140
     CGACTGGAAA AACACACTAA CAAAATGGCT AGCACGCTAT TGCTTTCAGG TGGACACCGA      4200
     GCCCAACGCC GTCTCCGACG TATCTGGCCA GGCATTGAAT TAATTCAACG CCAAGCGCCC      4260
     GCCAACCTTT TTTAAATAAC TACACTAATA ATCAAAAATG TGACACCCCT CATGGGACAC      4320
     ACATTCACCC ACGAAAAATA CTTTTTCCAA ACATCATAAA TAAACACTTT AGTTTAGGTA      4380
     ACTCACTCAC CTTATCCCAT GGCGAGCCCA TAAGAAACAC TTGTCACATG GATTCAAAAT      4440
     AACGGCAAAT ATATTATGCC GCAATTATTT TTGATGACAG CCGCTAAGCC GCAGCTAATG      4500
     ACAACAAGAA ACAGCAGCAG AAGAAGAAGC AGCGGCTAAA ACAGCAGCAG AAGCATTGGT      4560
     AGCAGACGAA GACAAAACGG CAGCAGAATG CAACAGCTAC ATCAACATCA ACTATAAGCA      4620
     CGCCCAAATA ACCATACCAA TACAATCAAA TCAGAAATTA CACATGTAAT ATACACAATC      4680
     ACATTCATAC CAAATATAAT ACAAAAATAA TACATTCTCA ATCAGCTGTA ATACACACAC      4740
     TCACAATACT CACATAAGCT ATAATACACC TATTAGATAA AATACACATA TTTACTCTAA      4800
     CACTGGCATA CACATATGCT CACACTCGAA TCAAACAAAA AACCAAATTT TACTCACTCA      4860
     TCAAAAAAGA CAATGAATAT CAGGTAAAGT TATATCACCC GATTCCCCTC CCCCACCCAC      4920
     AAATCATAAT GCCGATTGCT GGCGGCAACC AAATTACTGC CGCGAGAGAA GGCATTTCAA      4980
     AAACGGCCTG CTGCCTAGCT ACAAATATAT ATATATATAT GCGTACTCAT ACACATATAT      5040
     GTACATATTC TAAAAATAAT CCCCTTTATC CCACCAAAAC AATTGATAAC GCAGTGGCAA      5100
     TGTCAATGTG TCAAAATTGC ATAGTCTACG AATGATGACA GCAGTATCAA TTTTTGCTAA      5160
     AAACTAATTA ATATGCTGAA TACATCTGGA GACAATTTGC ACGCACACAC ACAAATCCGC      5220
     TCGCATCAAT ATACTCCCAC ATATCACAAC AAATTTACAT CTCACAACAT TCTAGCAAAT      5280
     ATAAACAATT AATTTCTCTC AAACATACAT TCTTACAAAA AAGATACTCT ATCAAAACTG      5340
     CTGGCTTATG GCGAACTAGT TTTGCTGATG CCGCACTTTC ACCCTAAATT ATATATTACA      5400
     CTAAACAATA ATCATAAATA ATCTTAACAA AAACTCTACC ACATCAAGCC CATACAAAAA      5460
     ATATGGAGCA TTCACTTGAA GACGTGTGCA ATCGCGACAA ATGAATTATT CACTAAGTCA      5520
     GTTCGGCCAC TTAATACCCA TATGTATACT CATTTGTCTA TACTGCGCAC ACACACACTC      5580
     TCTTCACAAC TTATGCCAAA TTACACACAA CCACCACAAA ATATAACTTT ATAACACTTT      5640
     CAAATCAAAA CCTCATGCAC ACATATACAC ATAAAAATTG TATAGCTTAA GAAATACTTT      5700
     TTAAGAAATC AAAATTTATA ACGTTATGCA CAAATAGTAA TATATAATTT TAAAGTCAAT      5760
     AAACTCTGGA GGGGGGATTG GTTCGGTGTG TGACGGTGGG AAGGGGGATA CTTCGTACCG      5820
     CTACAGGATA GTGGCCTGTG TGTGGGTGTG CATACCCGTG ATGGTTGGAG CGGTTGACGA      5880
     GCATGAGCTA GTAGGCACCT TTAATGCTGC CTCGCCATGT CTCGAGCCCT CCAGGCCACC      5940
     ACGACCATGC ATACTCAAAC ACTCGCTCGC TCTCTGTGCG ATGCGAATGC TCGATGCCCG      6000
     ACGCTCGGTA CTCGGTACTC GGTACACGAT GCTCGGTGTC CTCGATCCCG TTTCCCATTC      6060
     GTCTCATCCG ACCCGGTCTC CTGCTCAACC TAAAACAGAA AAAATTGAGT CTCTTTTTGG      6120
     TGCCTGAAGT GAACGGACGT GCTCGCGGAG AAATAAAAAG TAAAAATCAT ATAAATTCGG      6180
     CAGCGCGCGC CAAAACGAAC CGAACATAGT ATATAGGGAC ACGATTGCAA AGTGCAAATT      6240
     GCAATACATA TCCCTCGGTT TTTTCATTCG GTTTTTCACT CGCTCAATAC AGTGGCTTTT      6300
     TTTTCCTTGT ACATATATAT AGTGCACGTG GCCTGCTGTG ACTTTTGCAC AAAGTGTCGC      6360
     CACGTGGACA ATCTAGAACT TTTGCTTTAG TTGTTCTGCT GCGCATCAGA CGCTGGCGCA      6420
     CGGCGTGCAA AAACACAAAA GTGGGTTATG TATAACAAAT ACATAACTGC CTAGTGCCTT      6480
     ATATGTACTA AAATTAACCA CTATAACTCA TACTCTCGTC AATAAATCAA TAATAATTGA      6540
     TATAACCTAA AATAAAATTA CATA                                             6564
//
ID   DTEII    standard; DNA; INV; 5386 BP.
XX
AC   M28878;
XX
DR   FLYBASE; FBgn0013017; Dtei\I-element.
XX
FT   source          M28878:1..5386
FT   SO_feature      CDS ; SO:0000316:190..1479
FT                   /protein_id="AAA74494.1"
FT                   /translation="MTDPPDIHNFTAKSYQSQLGNPKFIVIKRKDNNSLERISPFIIK
FT                   KSVDFACGGEVEVCKRTRDGSLLIKTKNELQAIKLLKLTTMADVEVTATEHKTLNFSK
FT                   GVIYCNDLRYIDEDTILQELKPQKVTEVKKIMKRQNPNSNSDTNNTTLIETGLIIITF
FT                   ESHKLPEILRIGYETVRVRDYIPLPLRCKKCLRFGHPAPICKSLETCTNCSEIKHTND
FT                   GETCTNEKNCLNCRNNPEINHQHSPLDRKCPTFIKNQELTAIKTTQKVDHKTAQRIYF
FT                   ERHGFQLRDSYAKTLTNGTTQIKTNTQAPNIDANTHTIQSQNQNSYITPTSTPHTTSS
FT                   KTTTTGPAKTTPLSNQPQQRHHHHCYDEPEDMDTYHPTDHPTFTPYSSQHTEDLKIKI
FT                   YSKDKSNNLSTNLKASKIKAKALNKKKHTNNSDSESI"
FT   SO_feature      CDS ; SO:0000316:1559..5263
FT                   /protein_id="AAA74495.1"
FT                   /translation="MSLTVIQWNLKGYVNNYSQLLILIKKYSPHIISLQETHIQHTNT
FT                   IPTPINYKLLTNIATNRFGGVRILVHKSIQYTTLNITSDPEAIAINIQSKIKLNIFST
FT                   YISPTKNISDQTLQNTFNIQQTPSLITGDFNGWHPSWGSPTTNTRGKITQRFIDNTHL
FT                   ILLNDKSPTHFSTHNTYSHIDLTLCSPILAPHANWKILNDLHGSDHFPIITTLFPTTN
FT                   TQKFNRPFFKLKEANWDQYSAHTQQINEKYPTSQNVNKEAAQINRIILYSANLSIPQT
FT                   SPNAHPTGFHGGTSTSTNCESKNNLRWKKLNRTITLENIIDYRRKNAKFRYELKKRKK
FT                   EASSSFTSTIHPTTPSSKIWTNIRRFCGLNPIKQIHAISSPENNETTLASNEIANIFA
FT                   QHLSELSGDWNFSEEFRNNKYRNNLHNYTPSPIAQTIEKNITYLELISALQTLKGSAP
FT                   GLNRISYQMIKNSSPTTKHRITKLFNEIFNSHIPQAYKTSLIIPILKPNTDKTKTTSY
FT                   RPISLNCCIAKKLDKIIAKRLWWLVTHSNLLSENQFGFKKGKSTSDCLLYVDYLITKS
FT                   KMHTSLVTLDFSRAFDRVGVHSIIHQLQEWKTGPKIINYIQNFMINRKIIVRVGPHTS
FT                   SPLPLSNGIPLGSPISVILFLIAFNKLSNIISLYKEIKFNAYADDFFLIINFKKNTNI
FT                   SLDNLLNDIGNWGSYSGASLSLSKCQHLHICKKHHCTSKISCNNIQIPTVTSLKILGI
FT                   TINNKYKWNTHIYSLLPKLYNKLNIIKCLSSPKFNCNTLSLLNVAKATVIAKLEYGLF
FT                   LYGHAPKSILNKLKTPFNSAIRLALGAYRSTPINNLLYESNIPSLEMKRDLQIAKLSQ
FT                   NLSFCKNRPIHKFVRHKKYKKKTLSIIDQTIKLSLELNLPYKPIKLHKYKPSWDLPNL
FT                   IDTSLRGHKKQETSPESYRKLFEHTKNKLKPHSFIFTDGSKINCIITFAITTDTNILK
FT                   QGILPPYSSVLTSETIAILEAIELIKTRRGKFGIWFDSLSAIDSIKNPNNNSFYPNRI
FT                   RSLITQLAPKIKIMWIPGHSGIIGNELADQAAKLASNMPLIVTPNINNTDIKRHLKAE
FT                   LATKQKENIINCNQWYQSLNTNNTHTCDYLKQTHQNWTRLDQIKIIRLRLGHTNITHQ
FT                   HYLNPNPITVCPFCQGDLSISHILNSCPSLIQTKQAIFRTLPLDLLSKPNPENIQKIL
FT                   VFLKKTRIIPPNFKKKKQMYNNKHSNHLTN"
XX
SQ   Sequence 5386 BP; 2183 A; 1430 C; 614 G; 1159 T; 0 other;
     CAGTACAACT TCAACCTCCG AAGAGATAAG TCGTGCCGCT ATGTTTAAAG CCTCGCTTCG        60
     GCCACAAGCC CTAAACTCTT ATCAGCAAAA CTTTGCACAA ACAAATATAA ACCACAAAGA       120
     TAAACAAAAA AACACAACAA CAAAAACACC AAGACCTATA ACTCGGGCTG AAGCCTTTAA       180
     CTAACAATCA TGACAGACCC ACCAGACATT CATAATTTCA CCGCAAAATC TTACCAATCC       240
     CAATTAGGCA ACCCAAAATT TATTGTCATT AAAAGGAAAG ATAACAACTC GCTTGAAAGA       300
     ATATCACCTT TCATCATTAA AAAATCTGTG GACTTTGCCT GTGGAGGAGA AGTTGAGGTA       360
     TGCAAACGTA CAAGAGACGG CAGCCTATTA ATAAAAACTA AAAATGAACT ACAAGCCATA       420
     AAACTCCTTA AACTAACAAC AATGGCAGAT GTGGAAGTAA CAGCAACTGA ACATAAAACA       480
     TTAAACTTCT CTAAGGGAGT TATCTATTGC AACGACCTTA GATATATCGA CGAAGACACA       540
     ATTCTGCAAG AGTTGAAACC ACAAAAAGTA ACTGAAGTAA AAAAAATAAT GAAACGACAA       600
     AACCCCAACT CTAACTCTGA TACGAACAAC ACCACCTTAA TTGAAACCGG CCTGATCATT       660
     ATAACATTTG AATCACACAA ACTCCCTGAA ATATTACGAA TCGGATACGA AACAGTCCGA       720
     GTACGAGACT ATATTCCACT TCCACTCCGA TGCAAAAAAT GCCTTCGCTT CGGCCACCCA       780
     GCACCAATAT GCAAAAGCCT AGAAACCTGC ACCAATTGCT CAGAAATAAA ACACACAAAC       840
     GACGGAGAAA CATGCACAAA CGAAAAAAAC TGCTTAAACT GCAGAAATAA CCCAGAAATC       900
     AATCATCAAC ACAGCCCACT TGATCGCAAA TGCCCCACTT TTATTAAAAA CCAGGAACTA       960
     ACAGCCATTA AAACCACACA AAAAGTAGAC CATAAAACTG CTCAACGTAT CTATTTTGAA      1020
     CGACACGGCT TCCAATTGCG AGACTCCTAT GCCAAAACAC TCACAAACGG CACAACACAG      1080
     ATAAAAACAA ACACTCAAGC ACCTAATATC GACGCAAATA CACACACAAT CCAATCGCAA      1140
     AACCAAAATT CGTACATCAC ACCCACATCA ACACCACATA CCACTTCATC GAAGACAACA      1200
     ACAACTGGAC CAGCCAAAAC AACTCCACTA TCAAACCAAC CGCAACAACG CCACCATCAT      1260
     CACTGCTACG ACGAACCAGA AGACATGGAT ACTTACCACC CCACTGACCA CCCCACATTT      1320
     ACGCCATACT CATCACAACA TACAGAGGAC CTAAAAATAA AAATTTACTC AAAAGATAAG      1380
     TCTAATAACC TATCTACTAA CCTCAAAGCA TCCAAAATAA AGGCCAAAGC TCTAAACAAA      1440
     AAGAAACACA CTAACAACAG CGATAGCGAA TCCATATAGA ATCTTAAGCC CTACACAGAA      1500
     CTTAAACTAA ACCGTCAACA CCACCCCTAA ACTAAGTTAT AAGCTTATCT CCTCCCAAAT      1560
     GTCCCTTACT GTAATCCAAT GGAACTTAAA AGGATACGTA AACAACTACA GCCAACTCCT      1620
     TATTCTCATT AAGAAATACT CCCCACACAT AATTTCCCTC CAAGAAACCC ACATTCAACA      1680
     CACTAATACC ATTCCAACTC CAATAAACTA TAAGCTATTA ACCAATATAG CCACCAATAG      1740
     ATTTGGGGGC GTACGCATAC TAGTTCATAA GTCAATCCAA TACACTACCC TCAATATCAC      1800
     AAGCGATCCA GAAGCAATAG CCATAAACAT ACAATCTAAA ATAAAACTAA ACATATTTTC      1860
     CACATACATC TCCCCTACCA AAAACATTTC TGACCAGACA CTCCAAAACA CATTTAACAT      1920
     TCAGCAAACA CCATCTCTAA TTACGGGAGA TTTCAATGGA TGGCACCCGT CTTGGGGCTC      1980
     CCCAACAACA AATACACGAG GGAAAATAAC TCAAAGATTC ATCGACAATA CACACCTTAT      2040
     TCTACTAAAC GACAAATCTC CCACACACTT TTCAACACAC AATACTTACT CACATATCGA      2100
     CCTCACACTC TGCTCTCCAA TCCTAGCCCC TCACGCAAAC TGGAAAATTC TAAACGATCT      2160
     TCATGGCAGC GACCATTTTC CTATCATTAC GACCCTATTC CCAACGACTA ATACACAAAA      2220
     ATTCAACAGA CCCTTTTTTA AACTGAAAGA AGCCAACTGG GACCAGTACA GCGCACATAC      2280
     ACAACAAATA AACGAGAAAT ACCCTACCTC CCAAAACGTA AACAAAGAAG CCGCCCAAAT      2340
     TAATAGAATT ATTTTATATA GCGCAAACCT TTCAATCCCG CAAACCTCAC CAAACGCACA      2400
     TCCTACAGGG TTCCATGGTG GAACAAGCAC CTCAACCAAC TGCGAAAGCA AAAACAACTT      2460
     GCGTTGGAAA AAATTAAACC GTACAATCAC CCTAGAAAAC ATTATTGACT ATAGACGTAA      2520
     AAACGCAAAA TTTAGGTACG AATTAAAAAA AAGAAAAAAA GAAGCTTCCA GCTCATTCAC      2580
     CTCAACCATC CATCCCACTA CCCCCTCATC CAAAATATGG ACCAATATAA GACGTTTCTG      2640
     CGGACTTAAC CCAATAAAAC AAATTCATGC CATATCCAGC CCAGAAAACA ACGAAACGAC      2700
     ACTAGCTAGC AACGAAATTG CTAACATATT CGCACAACAC CTTTCTGAAC TCTCCGGCGA      2760
     CTGGAACTTT TCAGAGGAGT TCCGAAACAA TAAATACAGA AACAACCTAC ACAACTATAC      2820
     CCCCTCTCCA ATAGCCCAAA CCATTGAAAA AAACATAACA TATCTCGAAC TCATCTCAGC      2880
     GCTACAAACA TTAAAAGGAT CAGCTCCAGG ACTCAATAGA ATTTCATATC AAATGATAAA      2940
     AAATAGCTCC CCCACAACCA AACACAGAAT AACAAAACTA TTTAATGAAA TATTTAATAG      3000
     CCACATACCA CAAGCCTACA AAACAAGCCT AATCATCCCA ATCCTCAAGC CTAACACCGA      3060
     CAAAACTAAA ACTACGTCTT ACCGACCCAT TTCTCTCAAC TGCTGTATAG CAAAAAAACT      3120
     AGATAAAATT ATAGCCAAAA GACTCTGGTG GTTGGTGACA CATAGCAACC TACTTAGCGA      3180
     AAACCAATTT GGATTTAAAA AAGGCAAATC GACTTCGGAC TGTCTACTCT ATGTAGACTA      3240
     CCTCATAACG AAGTCAAAAA TGCACACCTC CCTCGTCACT CTTGACTTTT CAAGAGCCTT      3300
     CGATCGAGTA GGTGTGCACT CCATAATCCA CCAGCTGCAG GAATGGAAAA CAGGCCCAAA      3360
     AATTATAAAC TACATACAAA ACTTTATGAT TAACAGAAAA ATAATTGTCC GTGTCGGTCC      3420
     GCATACATCA AGCCCACTAC CCCTATCCAA CGGAATTCCC CTTGGTTCAC CCATATCCGT      3480
     AATACTCTTT CTCATAGCTT TTAATAAATT ATCTAATATC ATATCCCTAT ACAAAGAAAT      3540
     AAAATTTAAC GCATACGCCG ACGACTTCTT CCTTATAATA AATTTCAAAA AAAACACAAA      3600
     CATCAGCCTA GACAACCTAT TAAATGATAT AGGGAATTGG GGCTCCTACT CAGGGGCATC      3660
     GCTATCCCTA TCAAAATGCC AACACCTCCA CATATGTAAA AAACATCACT GTACTTCGAA      3720
     GATAAGCTGC AACAACATCC AAATTCCTAC CGTTACTTCC CTAAAAATTC TAGGTATAAC      3780
     CATAAACAAC AAATATAAAT GGAACACACA CATATATTCA CTCTTACCCA AACTCTACAA      3840
     TAAGCTAAAC ATAATAAAAT GTCTATCCAG TCCCAAATTC AATTGCAACA CGCTCTCTCT      3900
     ACTTAATGTA GCAAAGGCAA CGGTCATCGC CAAATTAGAG TATGGCCTGT TTCTATACGG      3960
     CCACGCTCCC AAAAGCATTC TAAACAAATT AAAAACACCA TTTAACTCCG CAATCCGTCT      4020
     AGCCCTCGGA GCCTATCGCT CTACCCCAAT AAATAATTTA CTCTACGAAT CAAATATTCC      4080
     CTCTTTAGAA ATGAAACGAG ACCTTCAAAT AGCCAAGCTA TCCCAAAACC TAAGCTTTTG      4140
     CAAAAACAGG CCAATTCACA AATTTGTTAG GCACAAAAAA TATAAAAAGA AAACACTATC      4200
     AATAATAGAC CAAACAATCA AGCTCAGCCT AGAACTTAAC CTACCCTACA AACCAATAAA      4260
     ACTCCATAAA TACAAGCCAT CATGGGACCT CCCCAACCTA ATAGACACAT CACTCAGAGG      4320
     CCACAAGAAA CAAGAAACAT CCCCAGAATC ATACAGAAAA TTATTCGAAC ACACAAAAAA      4380
     TAAACTAAAG CCACATAGTT TCATATTCAC CGACGGTTCA AAAATTAACT GCATTATAAC      4440
     ATTCGCCATA ACAACTGACA CAAACATCTT GAAACAAGGC ATACTGCCTC CATACTCATC      4500
     CGTCCTCACC TCCGAAACAA TTGCCATACT AGAAGCAATA GAACTAATTA AAACCCGAAG      4560
     AGGTAAATTT GGTATCTGGT TCGACTCCCT ATCAGCAATA GACTCAATCA AAAACCCGAA      4620
     TAACAACAGC TTTTACCCAA ACCGAATAAG ATCCCTAATA ACACAACTTG CCCCTAAAAT      4680
     TAAAATAATG TGGATTCCTG GCCATTCAGG AATAATAGGA AATGAACTTG CCGATCAAGC      4740
     TGCAAAATTA GCAAGCAATA TGCCACTAAT AGTCACCCCA AATATAAACA ACACAGATAT      4800
     AAAAAGACAT CTTAAAGCTG AACTTGCGAC AAAACAAAAA GAAAACATTA TAAACTGCAA      4860
     TCAATGGTAC CAATCTCTTA ACACAAATAA CACACACACC TGCGATTACC TTAAACAAAC      4920
     TCACCAAAAT TGGACCAGAC TCGACCAAAT AAAAATAATA CGACTTCGAC TAGGACACAC      4980
     AAACATAACC CACCAACACT ACCTAAATCC TAATCCTATA ACAGTTTGCC CTTTTTGCCA      5040
     AGGAGATCTT TCAATAAGCC ACATACTGAA CTCATGCCCA TCCCTTATAC AAACCAAGCA      5100
     AGCCATATTT AGAACACTAC CCCTAGACCT TCTTAGCAAG CCCAACCCAG AAAACATACA      5160
     AAAAATCCTA GTTTTCCTAA AAAAAACTAG AATTATACCA CCAAATTTTA AAAAAAAAAA      5220
     ACAAATGTAC AACAACAAAC ACAGTAATCA TTTAACCAAT TAGATTTAAA AAATAAATTA      5280
     ATAAATAAAA AATTGTAAAC CAACATAGCC ATAGGCCCAG CAGCTAGTGC TATATTACTT      5340
     ATAGTTAGTT TAGTTTTGTA AACTGCTCTA TCTATAATAA TAATAA                     5386
//
ID   OSV    standard; DNA; INV; 1543 BP.
XX
AC   AY089271;
XX
DR   FLYBASE; FBgn0063755; Osvaldo.
XX
FT   source          AY089271:1..1543
FT   SO_feature      CDS ; SO:0000316:172..1527
FT                   /protein_id="AAL90009.1"
FT                   /translation="MGVGAATVRFRNLVQKGPAEHRCRRTFKTTSAGDEPKNELEVHE
FT                   QPREQQGCRCFEEMRRKVKQPPQKFPDYLEEDGKLYRHIAHRACNEEVASWKMCIPIG
FT                   QRQRVMTENHDMPTAARYYWPGMHRGVRKYVRNCECCMMYKPSQLQAAGKMLTQVPEE
FT                   PWATVCADFVGPLPRSKHGNSMLLVLVDRFSKWTEIVPMRRATTETMRKAVRERIVAR
FT                   YGVPKVMITDNNVQLTIRAFRKFLEELGVRHQLTAPYTPQENPTERANRTVKTMIAQF
FT                   TGADQRTWDEHWPELQLAVNTSVAETTGYSPAFITQGREPRLPNALFDEKTTGTGKCT
FT                   QTPVENAEKLKEIFELVRRNMEKAVQDQARHYNLRRRPWKPKVRDTVWAKEHHLSKAA
FT                   EGFAAKLAPRFDGPYMIKKFTSPVICVLEHKTSKKEKTAHISDLKPGSAGAGGPGDFE
FT                   E"
XX
SQ   Sequence 1543 BP; 471 A; 359 C; 469 G; 244 T; 0 other;
     GTAATCTCAT ACTCCAGTAG AACGCTGAAC GCAGCGGAGA GGAACTACTC GGCAACGGAA        60
     AAGGAATGTT TAGCAATAGT ATGGGCCGTC GGAAGTTGAG ACCGTACCTC ATCACGGACC       120
     ATATGGCTCT GAAATGGCTG AATAACATCG AGAGCCCATC AGGATAGCGA GATGGGCGTT       180
     GGAGCTGCAA CAGTACGATT TCGAAATCTC GTACAGAAAG GGCCAGCTGA ACATCGTTGC       240
     CGACGCACTT TCAAGACAAC CTCTGCAGGA GATGAGCCGA AGAATGAGCT AGAGGTCCAC       300
     GAACAACCGA GAGAGCAGCA AGGATGTAGG TGCTTTGAGG AGATGCGAAG AAAAGTGAAG       360
     CAGCCGCCGC AAAAATTTCC GGACTATTTG GAGGAAGACG GCAAGCTGTA CCGACACATA       420
     GCTCATCGGG CGTGCAACGA GGAGGTGGCA TCGTGGAAGA TGTGTATACC GATCGGTCAG       480
     AGGCAGCGCG TCATGACCGA AAACCACGAC ATGCCGACTG CAGCTCGGTA TTACTGGCCG       540
     GGAATGCATC GAGGCGTAAG AAAGTACGTG CGGAACTGCG AGTGCTGCAT GATGTACAAG       600
     CCCAGCCAGC TACAGGCGGC CGGAAAAATG TTGACACAGG TGCCGGAAGA ACCATGGGCA       660
     ACAGTGTGCG CAGATTTCGT GGGCCCCTTG CCACGGTCGA AGCATGGAAA TTCGATGCTG       720
     CTGGTCCTGG TGGACAGATT TTCAAAGTGG ACCGAGATCG TTCCTATGAG AAGGGCGACC       780
     ACTGAGACGA TGCGAAAGGC TGTTCGAGAG CGGATAGTGG CCAGATACGG AGTGCCCAAA       840
     GTGATGATCA CAGACAACAA CGTGCAGTTG ACAATTAGGG CGTTCAGGAA GTTCCTGGAG       900
     GAGCTGGGGG TACGACACCA GCTCACGGCT CCATACACTC CGCAAGAAAA CCCTACGGAA       960
     AGGGCCAACA GGACCGTCAA AACAATGATC GCGCAATTCA CAGGTGCCGA TCAGAGGACA      1020
     TGGGATGAGC ACTGGCCGGA GCTGCAGCTG GCGGTTAACA CAAGTGTAGC GGAGACCACA      1080
     GGATACTCGC CGGCGTTCAT AACGCAGGGA AGGGAGCCGA GGCTGCCCAA TGCGTTGTTC      1140
     GACGAAAAGA CGACCGGGAC CGGCAAGTGC ACCCAGACAC CGGTGGAGAA CGCGGAGAAA      1200
     TTGAAAGAAA TCTTCGAGCT GGTGCGGAGG AATATGGAAA AGGCGGTCCA GGATCAGGCA      1260
     CGCCACTATA ATCTCCGAAG ACGGCCGTGG AAACCCAAGG TGAGGGACAC AGTATGGGCC      1320
     AAAGAGCACC ACCTGTCAAA GGCAGCCGAA GGTTTCGCGG CAAAATTGGC CCCGAGATTT      1380
     GACGGGCCGT ACATGATAAA GAAATTCACG TCACCAGTAA TATGCGTCCT GGAACACAAA      1440
     ACAAGCAAGA AAGAAAAGAC AGCACACATA AGCGATCTGA AGCCGGGAAG CGCGGGCGCC      1500
     GGCGGGCCAG GAGACTTCGA GGAATAAAAA AAAAAAAAAA AAA                        1543
//
LOCUS       DME542581               10463bp    DNA 
XX
AC   AJ542581;
XX
DR   FLYBASE; FBgn0069343; TAHRE.
XX
FT   source          AJ542581:1..10463
FT   SO_feature      five_prime_UTR ; SO:0000425:1..452
FT   SO_feature      three_prime_UTR ; SO:0000426:6698..10463
FT   SO_feature      CDS ; SO:0000316:453..3350
FT                   /db_xref="TAHRE:; TAHRE\gag"
FT                   /protein_id="CAD65868.3"
FT                   /translation="MSTSDHLFSDDEVHSISSSPEQRNSPFHLEISPMSHESDNSQSN
FT                   ISIINLRKLPLKPTNNISKCSSGTAINIFHSLSHKEKENMNTNIAQKDPLSIDNTAAD
FT                   TDGAKSSILKGKLPSPPLSSHTYKGKLPPATTHTNISALTHTDASQREKIPTSVICTN
FT                   AAAATNTNADLGAKTSDALGNFPSLSHSDHSMENNLSSSTKIGPNTNSPSSHILTNTS
FT                   QATNISAESRSKFPAPTNTDARLKKAITSDKGEIHTQIQTNKSKEHNQENKPFNYLSC
FT                   YASWSTSNPKPDISKLSLTRKSTNRTGNSGKRSISPHQKNASLCPSAQGNLNSNLNSN
FT                   SNPKSSATPTEVNLSAARTLSRPAAKRDLFNSSSRSPEEQPMSFSEVVAGTGPDIIAP
FT                   SAPAPLTKTPGKRTNSDLDCSSFKTPNKRLRATPNFETPSLFPPLITPVFKSKAAQSV
FT                   YEESKARNGPPRQPLPCSNNASARSATAPPGIAPLPPQNTDVELPPWKIVPQSRRAPP
FT                   ILVNNVREIVPLLEKLNYTAGVSSYSTRATEGNGVRIQAKDMTAYNKIKEVLTANGFP
FT                   LFTNQPKSERGFRVIIRHLHHSTPCSWIVEELLKLGFQARFARNMTNPATGGPMRMFE
FT                   VEIVMAKDSSHGKIISLKQLGGQRVDIERKNRTREPVQCYRCQGFRHSKNSCMRPPRC
FT                   MKCAGGHLSSCCTKPRTTPATCVNCSGEHISAYKGCPAYKTEKRKLAVNNIDINKIRT
FT                   IKDANITNYGRQGPPSRNNFPRLPFSSSTSNRTTAESRQDTARARRNNPFRQNRNEAR
FT                   PIQPRFSSHDFAIQKRLNKWRRNSDNVSKKGTINPKDKPKPRTPNMTSNPAQKHLEMF
FT                   QEKLRKARCERKEQDPEEKKTNIRMGDDESPPTTSRAARAFLKPRIIDDNIPTPMDTY
FT                   SNPQKSPSDFDSKSLTQRVENIEKKIDNLMELLFKCLESTKESTLAHLMTS"
FT   SO_feature      CDS ; SO:0000316:3386..6687
FT                   /db_xref="TAHRE:; TAHRE\pol"
FT                   /protein_id="CAD65869.1"
FT                   /translation="MTFNLNNGQASNTLKIGYWNSCGITNKTNELEAYIKKEGIQIML
FT                   VTETRLERNSNALNIKGFHTYLAQNPTSHRKGGTATIVSQNIRHACLNPIETDFMQSA
FT                   PIALIPSSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNC
FT                   KHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFH
FT                   TQKLKTYSTDELSSDHLPIQIVLDPDDSDWQHNKTNNAIIQKRTDLTKFKKNLENKIL
FT                   LNTEIRTGQDIDDCIDILINNIKSAANEATPPNRPQNNRTYNSSRRSTNLRLDEATKR
FT                   LLEEKKELNRIFRAVGTDEARRWFKNVQNRLSKEIRKLKQKLLNRNLQDIDTTDRYRT
FT                   QKLWKTTNTIKMQPRPCWPIKKDNDDSRQRTDYPWTRTLDEKAEAFASHLESRFRTNQ
FT                   INDAKDREFVRNELNKFKSLNASGESGNSNFKPVTLAELNGLINSLELKKAPGTDNLN
FT                   NKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISL
FT                   LSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD
FT                   VCSATFLDITEAFDRVWHDGLLYKLSRLIPRYLFDLLENYLSNRTFSVRIDGETTSRI
FT                   GNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTII
FT                   LSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLIN
FT                   GQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKIL
FT                   LWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNI
FT                   KSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPNRLELSKNRYVKQLSKYILPLQ
FT                   QHRPKPPAEPIYSSIHNYTKKEEAEIVAKMRTKFRQTLPTLLRIADQELEIRQSIAEE
FT                   KRKEKEKSERRKALEKGPPDRWCELQINKYSKLYRKGLRAREEILELMLGQPATVIKI
FT                   VIPDYEPEDDLTKKS"
XX
SQ   Sequence 10463 BP; 3913 A; 2638 C; 1670 G; 2242 T;
     TTAAAAGCAA AGTTTTTTAA AAGTTCAAAA ATATAATAAA ATAAAGCAAA TTAAATTTAA        60
     TTAATAAAAC AATTAATTTT ATTTAATAAA ATTAAACGCG CTTCGTCGGC AAATAACTCT       120
     CACGCGCAAA TTTTATTAAA TTCGCCTTTC AAGTTGAAAA ATTAAAAGTT AAAATCGTCT       180
     TCCGGCCGCA AAGTTTGAAC CGCGACGATA CAAACATTTA ATAGACAAAC AAAAAGCGAA       240
     CAATAAATCA GTGAATTATT TGTGCAAGCT GCCGCCATAA CCAAAAGGAG AAGAAGCCAA       300
     AAGACGAAGA GGAGAAAGTA AACCAGGAGA AATTAAGAAG ACAAGGAGGA AAACTTATTT       360
     AAAAAGACGA CCTAAACTGG AGGACAAATT ACAAATTAAA AGCCAGGGTA TTTATACCTT       420
     ACAAGTATCG ACCTAATATA ATATAAATAA ATATGTCCAC GTCCGACCAC CTATTTTCTG       480
     ACGATGAGGT TCACTCAATC TCCTCAAGCC CAGAACAGCG AAATTCACCA TTCCACCTTG       540
     AAATATCGCC CATGTCCCAT GAATCTGACA ATTCTCAGTC TAATATAAGC ATTATTAATC       600
     TGAGGAAATT GCCCTTAAAA CCAACAAATA ATATTTCAAA ATGCTCTTCT GGGACTGCCA       660
     TAAATATTTT TCATTCCCTT TCACACAAGG AGAAAGAGAA CATGAACACC AATATTGCCC       720
     AAAAAGACCC CCTCTCGATC GACAATACAG CTGCAGACAC GGACGGCGCC AAAAGTAGCA       780
     TCTTGAAGGG GAAATTGCCT TCCCCTCCGC TCTCATCACA CACATACAAG GGGAAACTAC       840
     CTCCAGCAAC GACCCACACT AACATATCTG CTCTTACTCA CACTGACGCT TCTCAAAGAG       900
     AAAAAATACC CACCTCAGTG ATCTGCACTA ATGCAGCTGC AGCTACTAAT ACAAATGCAG       960
     ATCTAGGCGC CAAAACGAGC GACGCCTTGG GAAATTTCCC CTCCCTCTCA CACAGCGATC      1020
     ATAGCATGGA GAACAACCTA AGTTCCTCCA CCAAAATTGG ACCCAATACA AATTCCCCTT      1080
     CTTCTCACAT ACTCACCAAC ACAAGCCAGG CCACAAACAT AAGCGCAGAA AGCCGCTCAA      1140
     AATTTCCCGC GCCCACCAAT ACTGACGCAC GCCTCAAGAA GGCCATTACT AGTGACAAAG      1200
     GGGAAATTCA CACACAAATT CAAACAAACA AAAGCAAGGA ACACAACCAA GAAAATAAAC      1260
     CATTTAATTA CTTAAGTTGC TACGCTTCAT GGTCAACTTC AAACCCAAAG CCAGACATTT      1320
     CCAAACTAAG TTTAACTAGG AAATCCACCA ACCGTACTGG AAATAGTGGG AAAAGAAGCA      1380
     TTTCCCCCCA CCAAAAGAAT GCTTCGTTAT GCCCTTCTGC TCAGGGTAAT TTAAATTCAA      1440
     ATTTAAATTC AAATTCAAAT CCCAAATCTA GCGCCACTCC CACTGAGGTG AATTTATCAG      1500
     CAGCCCGCAC CCTCAGCCGG CCGGCTGCCA AGCGCGATTT ATTTAATTCA TCTTCCAGGA      1560
     GCCCAGAAGA GCAGCCTATG AGTTTTTCGG AAGTGGTTGC TGGAACAGGT CCAGATATAA      1620
     TAGCACCCTC CGCTCCTGCA CCACTAACGA AAACTCCGGG CAAACGAACA AACAGCGATC      1680
     TGGACTGCTC TAGCTTTAAG ACACCTAATA AAAGATTACG TGCGACTCCT AACTTTGAAA      1740
     CTCCAAGCCT TTTCCCCCCG CTCATTACAC CCGTTTTTAA AAGTAAGGCG GCTCAATCTG      1800
     TTTATGAGGA GTCCAAGGCC AGGAATGGAC CCCCCCGCCA GCCGTTACCC TGCAGCAACA      1860
     ATGCTTCTGC TCGCAGCGCA ACAGCACCAC CCGGGATTGC CCCCCTACCC CCTCAGAACA      1920
     CAGATGTAGA GCTGCCCCCC TGGAAAATCG TTCCCCAGAG CCGTAGAGCA CCCCCTATAC      1980
     TAGTCAACAA TGTGAGGGAA ATTGTCCCAC TGCTGGAAAA GCTGAATTAT ACAGCAGGAG      2040
     TCTCCAGCTA CTCCACCAGG GCAACAGAAG GAAACGGGGT CAGGATCCAG GCCAAGGATA      2100
     TGACTGCCTA CAACAAAATC AAAGAAGTCC TGACCGCCAA CGGTTTTCCT TTATTCACTA      2160
     ACCAGCCCAA ATCCGAGAGG GGCTTCCGAG TCATCATCAG ACACCTCCAT CATTCCACAC      2220
     CATGCTCGTG GATAGTCGAG GAGCTGCTGA AGCTCGGATT CCAAGCACGC TTCGCTAGAA      2280
     ACATGACGAA TCCAGCTACA GGTGGCCCCA TGCGAATGTT TGAAGTGGAG ATAGTCATGG      2340
     CCAAGGACAG CAGCCATGGC AAAATTATCT CATTGAAACA ACTCGGTGGG CAAAGGGTGG      2400
     ATATCGAAAG GAAAAACAGG ACTCGGGAGC CGGTCCAGTG CTACAGATGC CAGGGCTTCA      2460
     GGCACTCCAA AAATTCATGC ATGAGGCCGC CCAGATGCAT GAAATGCGCT GGCGGTCACC      2520
     TGTCATCCTG TTGCACAAAG CCAAGAACCA CCCCTGCCAC CTGCGTCAAC TGCTCTGGTG      2580
     AGCATATTAG TGCGTACAAG GGATGCCCCG CTTATAAGAC TGAAAAACGA AAACTGGCGG      2640
     TCAACAACAT TGACATCAAT AAAATAAGGA CAATCAAGGA CGCGAACATT ACCAACTATG      2700
     GACGACAGGG CCCTCCCTCT CGCAACAACT TTCCCCGGCT ACCATTTAGC TCCTCAACCT      2760
     CCAACAGGAC AACAGCCGAA TCCCGCCAAG ACACAGCAAG AGCACGGCGG AATAACCCCT      2820
     TCCGGCAAAA CAGAAACGAA GCAAGGCCAA TCCAGCCACG CTTCTCCTCC CACGACTTTG      2880
     CCATCCAGAA ACGTCTGAAT AAATGGCGCC GCAACTCTGA CAACGTCTCC AAAAAAGGCA      2940
     CGATAAATCC CAAGGACAAG CCAAAGCCAC GAACACCTAA CATGACGAGC AATCCTGCAC      3000
     AAAAACACCT GGAAATGTTC CAGGAAAAGC TCCGCAAAGC AAGATGTGAA CGCAAGGAAC      3060
     AGGACCCGGA AGAAAAGAAG ACAAACATCA GGATGGGAGA CGATGAAAGC CCGCCAACCA      3120
     CCAGCAGAGC TGCCAGAGCA TTCCTCAAGC CAAGGATCAT AGACGACAAC ATCCCCACGC      3180
     CTATGGATAC ATACTCTAAC CCGCAAAAGA GTCCCTCTGA CTTCGACAGC AAAAGCCTTA      3240
     CACAACGAGT GGAAAATATT GAAAAGAAAA TTGATAATCT AATGGAACTA TTATTCAAGT      3300
     GCCTCGAATC CACGAAAGAG TCTACCTTAG CACACCTCAT GACCTCCTAA ATCACTAAAT      3360
     TCTCTACGCA AATTAAAATA CTACTATGAC CTTTAATCTA AACAACGGAC AAGCTTCCAA      3420
     TACCCTAAAA ATAGGGTACT GGAACTCATG TGGAATTACA AATAAAACAA ATGAACTGGA      3480
     GGCCTACATC AAAAAAGAGG GTATTCAAAT TATGTTAGTA ACTGAAACCA GGTTAGAGCG      3540
     AAATTCCAAC GCACTTAATA TCAAAGGCTT CCACACCTAC CTAGCACAAA ACCCTACATC      3600
     CCACAGAAAA GGCGGCACGG CCACCATAGT CAGTCAAAAC ATTAGACATG CCTGCCTAAA      3660
     TCCCATAGAG ACTGACTTCA TGCAGAGCGC ACCCATCGCA CTTATCCCCT CAAGTCGAAT      3720
     ACGCGCAGAC ATGACAATTG TTGCCCCAAT ATACTGTCCG CCTGTATATA AATGGACCAC      3780
     TGAACAATTC TCGAAGCTCT TCAACCACTT CGAGATGCTT CTCGATGGTA AGTCCAAATT      3840
     TATACTTGGC GGCGATTGGA ATTGCAAACA CAGACTCTGG GGTAACTATT TATCCTGCGC      3900
     TAGGGGAAGA TCTCTGTCAC AGTCAATCCT TGCAAGGAAA GACCTTGACA TAGTTGCTAC      3960
     CGGCCATGCC ACACACTTTC CCTTCGACAA GAAAAAACAG CCCTCTGCAC TGGACTTTGC      4020
     AATATGCAAG GGCTTCCACA CTCAAAAACT AAAAACCTAC TCCACAGATG AACTCAGCTC      4080
     TGACCACCTT CCCATCCAAA TAGTCCTAGA TCCTGACGAC TCAGACTGGC AACATAATAA      4140
     GACAAACAAT GCTATTATAC AAAAAAGAAC AGATCTCACT AAATTTAAGA AAAACCTAGA      4200
     AAACAAAATA TTACTAAACA CCGAAATTCG CACAGGACAG GACATCGACG ACTGCATAGA      4260
     CATTCTTATC AATAACATAA AATCCGCAGC CAATGAAGCC ACCCCACCTA ATCGCCCCCA      4320
     AAATAACCGC ACCTACAATT CTTCAAGAAG ATCCACAAAC CTAAGGCTAG ATGAAGCAAC      4380
     TAAAAGGTTA CTTGAGGAGA AAAAGGAGCT AAATCGAATC TTTAGAGCAG TAGGAACTGA      4440
     CGAAGCCCGA AGATGGTTTA AGAACGTGCA AAATAGACTG TCTAAAGAAA TCAGAAAGCT      4500
     CAAACAAAAA CTACTCAACC GCAACCTACA AGATATTGAC ACTACGGACC GATATAGAAC      4560
     GCAAAAACTA TGGAAAACCA CAAATACAAT TAAAATGCAA CCTCGACCCT GCTGGCCGAT      4620
     AAAAAAGGAC AATGACGACA GCCGTCAAAG AACTGACTAC CCCTGGACCA GGACTTTAGA      4680
     TGAAAAAGCT GAAGCCTTTG CATCTCACCT TGAGTCCCGC TTCAGGACAA ACCAAATTAA      4740
     CGACGCCAAA GACAGGGAAT TCGTCAGAAA TGAGCTAAAC AAATTTAAAT CATTAAATGC      4800
     GAGCGGCGAA TCCGGAAACA GCAACTTCAA ACCAGTCACT CTGGCTGAAC TAAATGGCCT      4860
     GATAAACTCA CTGGAATTAA AGAAAGCCCC AGGAACTGAC AATCTTAACA ACAAGACCAT      4920
     AATAAACTTA CCTACAAAGG CCAGAATATA TTTAATACTT ATTTATAACA ACATCCTGAG      4980
     AACTGGACAT TTCCCGAACA AATGGAAGCA CGCTAGCATC TCAATGATTC CCAAACCAGG      5040
     GAAATCACCA TTTGCTCTAA ATTCATACCG CCCAATCAGC TTACTCTCTG GTCTTTCCAA      5100
     ACTACTCGAA AGAATACTAC TGAAACGACT GTATGACATT GACTCTTTTG CCAAAGCAAT      5160
     CCCTTCCCAT CAATTTGGTT TCAGAAAGGA TCATGGAGCG GAACATCAGC TGGCCAGGGT      5220
     GACCCAATTT ATTCTAAAAG CTTTTGATGA AAAAGATGTC TGTTCTGCCA CATTCCTTGA      5280
     CATTACGGAA GCCTTTGACC GAGTATGGCA CGACGGCTTG CTATATAAAC TATCCAGACT      5340
     CATCCCCAGA TACCTATTCG ACCTACTTGA AAACTATTTA TCTAATAGAA CCTTCTCAGT      5400
     AAGGATCGAC GGTGAAACAA CGTCTAGGAT AGGTAATATT AGAGCAGGAG TGCCCCAGGG      5460
     CAGCATACTG GGACCGGTCC TCTACTCAAT ATACTCATCC GACATGCCCT ATCCCATCGT      5520
     AAAAGACTAT ATGCGTAACA TATCCTTCCC TGATTACCAC CCAACTAATA TTATCTTAGC      5580
     TACATATGCA GATGATACCA TAATTCTTAG CCGGTCCAAA TATACCAAGC TTGCGATCAA      5640
     CCTAAATCAA AACTACCTTA ACGTCTTCTG TAGGTGGTCA AAAAAATGGG ACATAGCAAT      5700
     TAATGCAAAA AAAACCGGAC ACATTCTTTT CTCCCTAAAA AAAGAACAAA CTAATATATA      5760
     CACTCCCCCA CTAATCAACG GACAAAGAGC TGCCAAACTA AACAAACAAC GCTATCTCGG      5820
     ACTTATGCTA GACAGAAGAC TGACCTTTTG TGCACACATG ACGCTGCTAA AGGGAAAGAC      5880
     TATAGCTGCA TATAAAAAAC TGGAATGGCT AATAGGAAAA AACAGCCACC TACCCAAAAA      5940
     TGCAAAAATT CTCCTCTGGA AGCAAATTGT CTCCCCCATC TGGCATTACG CCATAGCAAT      6000
     CTGGGGCTCG CTGGTATCTG ACACCCAAGC AAAGAAAATT CAAACAATGG AAAACAAATA      6060
     CATCAGACGA ATCATAAACG CCAGCAGATA CACGAGACAA GCAGACATAA GGACAAAATA      6120
     TAACATTAAA TCATTTGATG AAATTTTTGA CAAAGCAAGC CAACGCTACG CCAACTCCCT      6180
     CACTGACCAT GAAAACCCTT TAATATATGA CCTCCTTATC AACGCCTACA AGCCGAACAG      6240
     ACTGGAACTA AGCAAAAACA GATACGTCAA GCAATTATCA AAATATATAC TGCCCCTTCA      6300
     ACAACACCGA CCTAAACCAC CCGCAGAACC CATCTACAGC TCCATACATA ATTATACAAA      6360
     AAAGGAAGAA GCTGAAATAG TCGCCAAAAT GAGAACCAAA TTCAGACAGA CCCTTCCAAC      6420
     CCTCCTCCGG ATCGCTGACC AAGAATTGGA AATAAGACAA TCCATAGCTG AGGAAAAGAG      6480
     AAAGGAAAAA GAAAAATCCG AAAGGAGAAA AGCCTTAGAG AAGGGACCGC CAGATAGATG      6540
     GTGTGAACTT CAAATAAACA AATACAGCAA ATTATACAGA AAAGGACTAA GGGCCAGAGA      6600
     GGAAATCCTT GAATTAATGC TCGGACAACC CGCCACTGTA ATCAAAATAG TAATCCCAGA      6660
     CTATGAACCC GAAGACGACC TAACAAAAAA GTCTTGAAAA CTAAATAAAA GCAAATAAAA      6720
     CCAAAAGTAC ATGTATTTAC AATAATCATT GATTGTATAA TTGGTGATTA TAATATAACA      6780
     ATTATAATTA TTAATATAAT TGATTGTCAT AATTGTTAGC TATTGATTAT AAATAACTAA      6840
     TCAAAATACA AACTACAAAC TATGACCGAC GGAAAGACGC ACGCCGACCT GCTTCTCTTC      6900
     CTACAATAGC GATACACATC TCCTTCTCCA TAGTCAGCAT CTTTCTGTGG AAAAACAAAC      6960
     CAATTAGATG GATGATACAA AAACACAAAT AATAACCACA CCTCAACGCA TCCGGATAAA      7020
     AACAACCAAC GACAACGCAT TCCAGCTGAT CATGACGAAG TGATGCGAAT AAAATCACCA      7080
     CCTGGACATA AAAGAAGAAT CGGTAGATGG ATATGAAAAG GATTGGTGCG GCGAAAGCAT      7140
     GATGAATATA AGGCGACTCG CTGCAGCAAT ATATGCACAA CGTCACTTAC CTGAATCTTC      7200
     TTGCCGCACA GTCTTTTGAA GATCCTTATC ACCGCTGCAA TCCACACACA TCGCCGCATT      7260
     GCTAAAGACA GGCCATCTAA GCTGACCCAG CGCCGATTAG GACACTCTGT TCGACGAGCG      7320
     CCTACAGCGA ATTGCCGCTA AAACCTAAAA ACAAAAAATT TATTAACAAA TGAAATACAA      7380
     ATATACAAAA TTCAAATAAA ACAAAGCACT TACCTCACTG ACCGCATCCA ACTGCACGCA      7440
     ACACATCCAT ATCCAACATA ACAGACAAGA GGAGACGGGC CCTCAAACGT AAAACAATAT      7500
     CGCCAACTTT GCGCTTACAA ACACAAAAAA ATTTACAATT TTATGATGCC GTCTCCTCTT      7560
     CCCGATGCCA CTGCCTCAAT ATGGATTACT AGCGCGGAGC CGACAGCACA CTAAAAGGCT      7620
     GAAAAATTTG TCCTCAAAAT TAATATTTTT CCTTAGTACC ACTATCCCAA CGAATTTTCC      7680
     GCAAACCTGA AATAAAAAGA AAATTAATAA GAAAGTGATA CAAAATTAAC TAAAAACAAA      7740
     TAGAAAATAG CAAACCGGAC AAGCAAAGTA ACAGATATAA ATATGCTACT TCATCCTGCT      7800
     GAAGACACGC ATCCATGCAT CCTTCTTCCA AGACTGCAAA ACAGAAAGAA GGAAACACAA      7860
     GCTATACTGG GAAAAATATA TTAAATCACA ATACTTATCT AATTGCCAAT TTGAAGAATC      7920
     CTAAACCACG GCATCCCAGC GGCGATGGCC TTATCTTTAG CTGCTACAAA TGTACCTGAA      7980
     AACAAAAATC AAAAAACAAA AAGTAATTCA ACTATAAAAA CAAACATAAT ACTTACCTCC      8040
     AGACTATTTT CCTCCCGAAA AACATACCTG GAAAACAAAA ACAATGCAAC TATATAAACA      8100
     AATAAATACA CAAATAATAC TTACCTCCGA ACTGCATTCC ACCTAATGTA CCTGAAAAAA      8160
     TACAAAAATT ACAGAAATCA CAAAAATAAA TAACAAATGC TATACTTACC TAATTTTAAT      8220
     ATTACACCCA TTCCCATGGC CCAATCTTTG GGCGGTCCCC AGCAACAATT CCTGACCCGG      8280
     AACATTCTAA AATAATAGGA AAATAAATAA GATTGCGACT CAAAATTAAG CAATAACACA      8340
     AAAAAAAAAA CAACAAACCT GGCAGACAAA TTAGCTGACG ATAAATTACA ACACCATCCT      8400
     GCTGACGTCA CGCACGAAAA TTCTCTCTCC TAAAACACGG GATCCCAGCG GCGATGTCCT      8460
     TAACTTTAGC TGCTACAAAT GTACCTGAAA ACAAAAAAAC AAAAATTAAT TCAATTATAA      8520
     AAACAAACAT AATACTTACC TCCAGACTAT TTTTCCTCCC GAAAAACATA CCTGGAAAAC      8580
     AAAAACAAGG CAACTATATA AACAAATAAA TACATATATA ATACTTACAT CCAAACTACA      8640
     TTCCACCTAA TGTATCTGAG AAATACAAAA ATTAGAGAAA TCACAAAAAT AAATAACAAA      8700
     GGTTATACTT ACCTAAAATT TAATATTACA TCCATTCCCA TGGCCCAATC GTTGCGGCGG      8760
     TCCTCAGCAA CAATTCCTGA CCCGGAACAT CCTAAAATAA AAGGCAAATA AAATAACACA      8820
     CATAAAATAG CAAACCTGAC AGGCAAACTA GCAGATGCTA ATTTGCAACA CCATCCCGCT      8880
     GACGTCACGC ACGAAAATCC TTTCTCCAAG AGCGCAAAAA CTGAAAAAAG AAACACAAGC      8940
     TAACACTGGG AAATATATAC TTCTTAACAA AATACTTATC TAAATTGCCA ACCGGACGAC      9000
     TTCAAAGCTG CGGCCTAATT TTAATATTAC ATCTATCTCC GTGGCCCAAT CTTTGCGGCG      9060
     GTCCTCAGCA ACAACTCCTG ACCCGGAACA TCCTAAAATA AAAAGAAAAA CAAATAAGAA      9120
     TGCGACTCAA AATTAAGAAA TAACACACAA AAAATAACAA ACCTGACAGG CAAACTAGCA      9180
     GATGCTAATT TGCAACACCA TCATGCTGAC GTCACGCACG AAAATCCTTT CTCCTAAGAC      9240
     CGCAAAAGCT GAAAAAGGAA ACACAAGCTA ATACTGGGAA ATATATATTT TTAACAAAAT      9300
     ACTTATCTAA ACTGCCAAAT TGACGACTTC AAAGCTGCGG CATCATAACT ACAACGACCT      9360
     CCAAAATAAC TTTCAAAAAA TGTACCTGAA AAACAGAAAC TAATGAAATC ATAAAAACAA      9420
     ATATAATACT TACCCCCAGA TTAGCTATTA CCTGAAAAAC AAAAAATTAA TGCAACTATA      9480
     TAAACAAATA AAAACAAATA TACTTACCAT CAAACTATCC ATCACATTGT ACCTGAAAAC      9540
     AAAAACAAAT GCAATCATAA AAAACAATCC TAATGCAATA CTTACCTATC TCTAACTTTA      9600
     CATTCATTTC CATGCCCGTA TCGCTGCGGC GGACTTCTGC AACAAATCTT GAACCGGCGG      9660
     CCCCAAGCTG CCAATCCCGA CGCAATGGCC AATAGACGAG GCGCTCCTGG CAACTCTTGG      9720
     CGAACAACTA AGCTGCATTC TACTGACGAC TCCTCTGCCA CAACGAGACA GATTCCTCCA      9780
     TTACGATCCC AGCAGCTTTA AGACCTTGTA ACGACGGCTG CGCTGGACCC TCCTTGTTCT      9840
     ACCTTCTTTT GATGACCGGC GAAGTGGCCC TGCAAATTAA CAATTTATCA AACAACTGCA      9900
     ATCATCTGCC ACTGAGGTTG AAATATATAC CTACTAAATG ACAGCGGCGC GGGATACACT      9960
     CACCTATAAT AGGCTGCTTG CAGCGCTGGC CGGACATGCA TATTGCAAGT GGCACGCATC     10020
     CAGAGTCCAC AACAAGCCCC AGCCAGAATG CCAAAATTAC TCACCTGCAA TGTTTCCTGA     10080
     GGCCTCCAGC GACTCGGTGC TTCCGTCCTT CCGACGGGGG TACCTGAAAA GAATAAATCA     10140
     ATAACAATGT TAGTTTTAAA TTTCAATGTT TTCTATAAAA TCATTTCAAT TGTAAATTGT     10200
     AAACATACCA TACAATATGA TAATGTTACC TGTCCTAATT ACTGTCAAAA GCCTAAGTCT     10260
     ACAAAATACT AACTACTTTT ACATTATTAC TAACTATGTC CAACCCCCAA ACTCACCACA     10320
     TGTAATGTTA CATTCAAAAA TGCAAATTAT TGTACCTATA TATTACAAAC TCTGTAATCA     10380
     AAGGCAAAAT AAATTGTGGA TGCGGAACAG AATTTATTCT GTCTCCGTAC CTCCACCAGC     10440
     AAAGTTAAAA AAAAAAAAAA AAA                                             10463
//