silkworm_ReAS_TE.gff is the result of masking silkworm genome with ReAS TE.

All on one line, for example here (with descriptions):


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nscaf100	RepeatMasker	TE	9	172	1323	-	.	TransposonPrediction BGIBMREASTEA00000001  Target "bm_509" 364 192  class "Unknown"
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	Where: nscaf100:        is the id of the genome sequence.
	       RepeatMasker:    is the method
	       TE:              is the kind of sequence.
	       9:               is the start of the gene.
	       172:             is the end of the gene.
	       1323:            is the score of prediction.
	       -:               is the strand of gene.
   BGIBMREASTEA00000001:  is the id of the TE.
   Target "bm_509" 364 192  class "Unknown": is the homology annotation.