silkworm_PublicKnow_TE.gff is the result of masking silkworm genome with Public known TE.

All on one line, for example here (with descriptions):


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nscaf100	RepeatMasker	TE	1	172	1400	-	.	TransposonPrediction BGIBMKNOWNTEA00000001  Target "Bmmar1.B12" 546 368  class "DNA-BM"
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	Where: nscaf100:        is the id of the genome sequence.
	       RepeatMasker:    is the method
	       TE:              is the kind of sequence.
	       1:               is the start of the gene.
	       172:             is the end of the gene.
	       1400:            is the score of prediction.
	       -:               is the strand of gene.
   BGIBMKNOWNTEA00000001: is the id of the TE.
   Target "Bmmar1.B12" 546 368  class "DNA-BM": is the homology annotation.