# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Myosin_head PF00063.21 RKO82694.1 - 4e-174 580.5 0.0 3.5e-122 408.9 0.0 2.0 2 0 0 2 2 2 2 Myosin head (motor domain) Zeta_toxin PF06414.12 RKO82694.1 - 0.04 13.2 0.0 0.077 12.3 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_22 PF13401.6 RKO82694.1 - 0.044 14.1 0.0 0.095 13.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 RKO82694.1 - 0.06 13.9 0.1 0.14 12.7 0.1 1.6 1 0 0 1 1 1 0 ABC transporter PM0188 PF11477.8 RKO82694.1 - 0.063 12.4 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 Sialyltransferase PMO188 AAA_16 PF13191.6 RKO82694.1 - 0.13 12.6 0.0 0.32 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain PH_14 PF17787.1 RKO82697.1 - 2.9e-06 27.2 0.0 4.5e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 PH domain TerD PF02342.18 RKO82697.1 - 0.19 11.2 0.0 0.24 10.8 0.0 1.1 1 0 0 1 1 1 0 TerD domain His_Phos_1 PF00300.22 RKO82700.1 - 1.4e-15 57.5 0.0 1.9e-15 57.1 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) His_Phos_1 PF00300.22 RKO82701.1 - 1.4e-15 57.5 0.0 1.9e-15 57.1 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) zf-MYND PF01753.18 RKO82702.1 - 4.6e-10 39.4 12.6 4.6e-10 39.4 12.6 1.9 2 0 0 2 2 2 1 MYND finger TPR_MalT PF17874.1 RKO82702.1 - 0.00082 18.8 0.1 0.53 9.6 0.1 2.2 2 0 0 2 2 2 2 MalT-like TPR region TPR_2 PF07719.17 RKO82702.1 - 0.013 15.5 1.3 4.3 7.7 0.0 3.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO82702.1 - 0.017 15.9 8.4 1.6 9.7 0.2 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_12 PF13424.6 RKO82702.1 - 0.02 15.2 1.6 7.1 7.0 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat L27 PF02828.16 RKO82702.1 - 0.04 13.7 0.3 7.5 6.4 0.1 2.4 2 0 0 2 2 2 0 L27 domain TPR_7 PF13176.6 RKO82702.1 - 0.32 11.1 2.3 41 4.5 0.1 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 RKO82702.1 - 0.85 9.6 3.2 19 5.3 0.1 2.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_4 PF07721.14 RKO82702.1 - 2.8 8.8 8.9 22 6.1 0.6 4.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO82702.1 - 6.2 7.6 12.7 6.9 7.4 0.3 4.5 4 0 0 4 4 4 0 Tetratricopeptide repeat AAA_lid_3 PF17862.1 RKO82703.1 - 2.7e-09 36.7 0.0 3.7e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 AAA+ lid domain RNA_pol_A_bac PF01000.26 RKO82704.1 - 5.8e-31 107.2 0.0 8.1e-31 106.7 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 RKO82704.1 - 1.1e-10 40.8 0.0 1.2e-10 40.7 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain DUF1491 PF07372.12 RKO82704.1 - 0.1 13.0 0.0 0.64 10.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1491) Kelch_5 PF13854.6 RKO82706.1 - 0.00031 20.7 10.3 0.0051 16.8 0.0 4.5 5 0 0 5 5 5 2 Kelch motif Kelch_2 PF07646.15 RKO82706.1 - 0.00067 19.5 1.7 0.23 11.5 0.3 3.4 4 0 0 4 4 4 2 Kelch motif Kelch_3 PF13415.6 RKO82706.1 - 0.0015 18.8 0.4 0.0015 18.8 0.4 3.4 3 1 0 3 3 3 1 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO82706.1 - 0.0024 18.1 0.6 0.0024 18.1 0.6 3.2 3 1 1 4 4 4 1 Kelch motif Kelch_1 PF01344.25 RKO82706.1 - 0.0034 16.9 2.6 0.0066 16.0 0.4 2.4 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 RKO82706.1 - 0.0059 16.6 1.7 0.0059 16.6 1.7 3.0 2 1 1 3 3 3 1 Galactose oxidase, central domain Rho_GDI PF02115.17 RKO82710.1 - 7.4e-62 208.6 0.2 9.6e-62 208.2 0.2 1.0 1 0 0 1 1 1 1 RHO protein GDP dissociation inhibitor MCD PF05292.11 RKO82711.1 - 7.3e-55 186.3 0.0 3.1e-27 95.8 0.0 2.0 1 1 1 2 2 2 2 Malonyl-CoA decarboxylase C-terminal domain DUF1400 PF07176.11 RKO82714.1 - 0.05 13.9 0.0 0.38 11.0 0.0 1.9 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF1400) DUF812 PF05667.11 RKO82715.1 - 0.0076 15.2 3.3 0.0076 15.2 3.3 1.9 1 1 1 2 2 2 1 Protein of unknown function (DUF812) TPR_7 PF13176.6 RKO82715.1 - 0.37 10.9 2.2 4.3 7.6 0.4 3.1 2 1 0 2 2 2 0 Tetratricopeptide repeat Peptidase_M19 PF01244.21 RKO82716.1 - 0.0089 15.2 0.5 0.016 14.4 0.5 1.4 1 0 0 1 1 1 1 Membrane dipeptidase (Peptidase family M19) Fib_alpha PF08702.10 RKO82716.1 - 0.076 13.2 3.9 0.09 13.0 0.3 2.6 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Peptidase_S10 PF00450.22 RKO82717.1 - 0.00036 20.0 0.0 0.00046 19.7 0.0 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase MGC-24 PF05283.11 RKO82717.1 - 0.018 15.5 0.0 0.024 15.1 0.0 1.2 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Peptidase_S8 PF00082.22 RKO82718.1 - 4.3e-18 65.6 0.5 4.9e-18 65.4 0.5 1.0 1 0 0 1 1 1 1 Subtilase family Ribosomal_S5 PF00333.20 RKO82718.1 - 0.26 11.3 1.6 0.74 9.8 1.3 2.0 1 1 1 2 2 2 0 Ribosomal protein S5, N-terminal domain ABC_membrane PF00664.23 RKO82721.1 - 1.7e-08 34.5 0.5 1.7e-08 34.5 0.5 1.8 2 0 0 2 2 2 1 ABC transporter transmembrane region Glucos_trans_II PF14264.6 RKO82721.1 - 0.015 14.7 0.3 0.015 14.7 0.3 2.5 2 1 1 3 3 3 0 Glucosyl transferase GtrII DUF4491 PF14898.6 RKO82721.1 - 3.7 8.0 7.2 0.81 10.2 0.2 3.0 2 1 2 4 4 4 0 Domain of unknown function (DUF4491) DUF3792 PF12670.7 RKO82721.1 - 8.2 6.6 15.3 0.45 10.7 4.7 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3792) CCDC50_N PF15295.6 RKO82722.1 - 0.0009 19.4 10.7 0.0043 17.2 10.6 1.8 1 1 1 2 2 2 2 Coiled-coil domain-containing protein 50 N-terminus DUF4702 PF15774.5 RKO82722.1 - 0.063 12.2 0.0 0.073 12.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4702) AA_permease_2 PF13520.6 RKO82723.1 - 8.3e-08 31.5 4.2 1e-07 31.2 4.2 1.0 1 0 0 1 1 1 1 Amino acid permease Trp_Tyr_perm PF03222.13 RKO82723.1 - 0.0007 18.8 1.2 0.00082 18.5 1.2 1.0 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family ABC_tran PF00005.27 RKO82728.1 - 1.3e-20 74.3 0.0 2.1e-20 73.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 RKO82728.1 - 8.2e-05 22.5 0.0 0.033 14.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 RKO82728.1 - 0.029 13.8 0.0 0.048 13.1 0.0 1.4 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain Ribosomal_S21e PF01249.18 RKO82729.1 - 1.1e-40 137.6 0.0 1.2e-40 137.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S21e Polysacc_deac_1 PF01522.21 RKO82732.1 - 9.3e-07 28.8 0.4 3e-06 27.2 0.4 1.8 1 1 0 1 1 1 1 Polysaccharide deacetylase STE PF02200.16 RKO82733.1 - 5.2e-35 120.2 0.1 6.1e-35 120.0 0.1 1.1 1 0 0 1 1 1 1 STE like transcription factor BssC_TutF PF08201.11 RKO82733.1 - 0.14 12.2 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 BssC/TutF protein Zip PF02535.22 RKO82734.1 - 1.3 8.2 2.4 1.5 7.9 2.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter DUF4927 PF16279.5 RKO82737.1 - 0.029 15.4 0.0 0.036 15.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4927) MbeD_MobD PF04899.12 RKO82737.1 - 0.072 13.2 1.4 0.33 11.1 1.4 1.9 1 1 0 1 1 1 0 MbeD/MobD like RabGAP-TBC PF00566.18 RKO82738.1 - 5.7e-13 49.0 5.4 1.6e-12 47.5 5.4 1.7 1 1 0 1 1 1 1 Rab-GTPase-TBC domain Sdh5 PF03937.16 RKO82738.1 - 0.025 14.6 0.8 0.061 13.3 0.2 2.0 2 0 0 2 2 2 0 Flavinator of succinate dehydrogenase Copper-fist PF00649.18 RKO82742.1 - 1e-14 53.7 0.5 1.7e-14 53.0 0.5 1.4 1 0 0 1 1 1 1 Copper fist DNA binding domain DUF5349 PF17298.2 RKO82743.1 - 2 8.1 10.6 2.4 7.8 10.6 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5349) Beta-lactamase PF00144.24 RKO82744.1 - 1.7e-59 201.7 0.2 2.2e-59 201.4 0.2 1.1 1 0 0 1 1 1 1 Beta-lactamase Peptidase_S11 PF00768.20 RKO82744.1 - 0.00018 21.0 0.0 0.00032 20.2 0.0 1.3 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Beta-lactamase2 PF13354.6 RKO82744.1 - 0.0051 16.4 0.3 0.31 10.6 0.3 2.7 1 1 0 1 1 1 1 Beta-lactamase enzyme family Lipase_3 PF01764.25 RKO82748.1 - 2.3e-15 56.7 0.1 3.2e-15 56.2 0.1 1.2 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO82748.1 - 0.00017 21.2 0.7 0.00042 20.0 0.7 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) DUF4127 PF13552.6 RKO82748.1 - 0.018 13.7 0.0 0.024 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4127) MHB PF16525.5 RKO82748.1 - 0.2 12.0 0.0 0.35 11.2 0.0 1.4 1 0 0 1 1 1 0 Haemophore, haem-binding adh_short_C2 PF13561.6 RKO82749.1 - 8.1e-55 185.9 2.2 4.8e-54 183.4 2.2 1.8 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO82749.1 - 1.7e-41 141.9 1.9 3.9e-40 137.4 1.9 2.0 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 RKO82749.1 - 4.9e-08 33.1 3.2 1.7e-05 24.9 0.0 2.1 1 1 1 2 2 2 2 KR domain Pterin_4a PF01329.19 RKO82750.1 - 7e-29 99.8 0.1 8e-29 99.7 0.1 1.0 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase HAD_2 PF13419.6 RKO82751.1 - 6e-08 33.0 0.0 6.6e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 RKO82751.1 - 0.0011 19.4 0.0 0.0013 19.1 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase LcrG PF07216.12 RKO82751.1 - 0.016 15.1 0.0 0.11 12.5 0.0 2.2 1 1 0 1 1 1 0 LcrG protein Helicase_C PF00271.31 RKO82752.1 - 1.3e-12 48.0 0.0 7e-12 45.7 0.0 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain SNF2_N PF00176.23 RKO82752.1 - 1e-09 37.6 0.1 1.5e-09 37.1 0.1 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain ERCC3_RAD25_C PF16203.5 RKO82752.1 - 0.079 12.2 0.0 0.11 11.7 0.0 1.3 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase ResIII PF04851.15 RKO82752.1 - 0.17 11.9 0.1 7.5 6.5 0.0 2.5 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit FAA_hydrolase PF01557.18 RKO82755.1 - 7.6e-51 172.9 0.0 1e-50 172.4 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family FAA_hydrolase_N PF09298.11 RKO82755.1 - 4.4e-11 42.9 0.0 1.9e-10 40.9 0.0 1.9 2 0 0 2 2 2 1 Fumarylacetoacetase N-terminal CybS PF05328.12 RKO82756.1 - 1.8e-31 108.6 0.2 2e-31 108.4 0.2 1.0 1 0 0 1 1 1 1 CybS, succinate dehydrogenase cytochrome B small subunit zinc_ribbon_12 PF11331.8 RKO82758.1 - 0.061 13.1 1.5 23 4.9 0.0 3.5 3 0 0 3 3 3 0 Probable zinc-ribbon domain Zot PF05707.12 RKO82760.1 - 0.0011 18.6 0.0 0.0022 17.7 0.0 1.4 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) DUF853 PF05872.12 RKO82760.1 - 0.023 13.3 0.0 0.032 12.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) DEAD PF00270.29 RKO82760.1 - 0.067 13.0 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 DEAD/DEAH box helicase ABC2_membrane_5 PF13346.6 RKO82763.1 - 0.0045 16.6 11.4 0.0075 15.8 11.4 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein TatC PF00902.18 RKO82763.1 - 0.36 10.6 12.4 0.59 9.9 11.4 1.7 1 1 1 2 2 2 0 Sec-independent protein translocase protein (TatC) DUF5518 PF17647.1 RKO82763.1 - 0.74 10.0 20.0 0.044 13.9 13.1 2.3 2 1 1 3 3 3 0 Family of unknown function (DUF5518) DUF2070 PF09843.9 RKO82763.1 - 2.2 6.5 12.8 2.7 6.2 12.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) HSR PF03172.13 RKO82766.1 - 0.12 12.6 0.2 0.26 11.5 0.0 1.6 2 0 0 2 2 2 0 HSR domain SR-25 PF10500.9 RKO82766.1 - 1.8 8.1 17.9 0.41 10.2 5.4 2.6 1 1 1 2 2 2 0 Nuclear RNA-splicing-associated protein Nup35_RRM_2 PF14605.6 RKO82767.1 - 0.17 11.9 0.0 0.51 10.4 0.0 1.8 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif LETM1 PF07766.13 RKO82768.1 - 2.1e-17 63.4 0.0 3.2e-17 62.7 0.0 1.3 1 0 0 1 1 1 1 LETM1-like protein SAP PF02037.27 RKO82768.1 - 0.003 17.3 0.0 0.0072 16.0 0.0 1.7 1 0 0 1 1 1 1 SAP domain Rad51 PF08423.11 RKO82769.1 - 2.3e-79 266.3 0.0 2.8e-79 266.0 0.0 1.0 1 0 0 1 1 1 1 Rad51 RecA PF00154.21 RKO82769.1 - 1.5e-05 24.6 0.0 2e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.6 RKO82769.1 - 0.00049 19.7 0.1 0.00071 19.2 0.1 1.2 1 0 0 1 1 1 1 AAA domain DnaB_C PF03796.15 RKO82769.1 - 0.0023 17.3 0.0 0.0028 17.0 0.0 1.2 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain Fibrillarin_2 PF10113.9 RKO82770.1 - 0.039 12.6 0.0 0.043 12.4 0.0 1.0 1 0 0 1 1 1 0 Fibrillarin-like archaeal protein ABC_trans_N PF14510.6 RKO82772.1 - 8.6e-10 39.1 0.0 9.9e-10 38.9 0.0 1.2 1 1 0 1 1 1 1 ABC-transporter N-terminal TPR_17 PF13431.6 RKO82772.1 - 0.15 12.5 0.0 0.26 11.8 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat RRN3 PF05327.11 RKO82774.1 - 2.7 6.4 3.5 4 5.9 3.5 1.2 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Vma12 PF11712.8 RKO82775.1 - 3e-12 46.8 0.1 4.1e-12 46.3 0.1 1.2 1 0 0 1 1 1 1 Endoplasmic reticulum-based factor for assembly of V-ATPase Polysacc_synt PF01943.17 RKO82775.1 - 0.038 13.4 0.3 0.049 13.0 0.3 1.0 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein SecD_SecF PF02355.16 RKO82775.1 - 0.063 12.6 0.1 0.079 12.3 0.1 1.1 1 0 0 1 1 1 0 Protein export membrane protein Vma12 PF11712.8 RKO82776.1 - 1.7e-11 44.3 0.1 3.2e-11 43.5 0.1 1.4 1 0 0 1 1 1 1 Endoplasmic reticulum-based factor for assembly of V-ATPase Mpv17_PMP22 PF04117.12 RKO82777.1 - 9.3e-19 67.4 0.4 2e-18 66.4 0.4 1.6 1 0 0 1 1 1 1 Mpv17 / PMP22 family DUF5529 PF17669.1 RKO82777.1 - 0.046 13.7 0.0 0.068 13.2 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5529) Med30 PF11315.8 RKO82779.1 - 0.044 14.0 0.5 0.093 12.9 0.5 1.6 1 1 0 1 1 1 0 Mediator complex subunit 30 SKA2 PF16740.5 RKO82779.1 - 0.045 13.5 0.3 0.054 13.3 0.3 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 PKcGMP_CC PF16808.5 RKO82779.1 - 0.095 12.6 2.7 0.17 11.8 2.7 1.4 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Dmrt1 PF12374.8 RKO82780.1 - 1.4 9.4 7.6 0.076 13.5 1.6 1.9 2 0 0 2 2 2 0 Double-sex mab3 related transcription factor 1 Sporozoite_P67 PF05642.11 RKO82782.1 - 7 4.6 8.5 7.1 4.6 8.5 1.0 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Ribosomal_L9_C PF03948.14 RKO82784.1 - 2.6e-06 27.8 0.7 1.2e-05 25.6 0.0 2.0 2 0 0 2 2 2 1 Ribosomal protein L9, C-terminal domain TubC_N PF18563.1 RKO82784.1 - 0.38 10.8 1.6 16 5.6 0.1 2.7 2 1 0 2 2 2 0 TubC N-terminal docking domain MULE PF10551.9 RKO82786.1 - 0.023 15.1 0.0 0.026 15.0 0.0 1.1 1 0 0 1 1 1 0 MULE transposase domain RtcR PF06956.11 RKO82788.1 - 0.62 9.5 2.1 27 4.1 0.0 3.4 1 1 2 4 4 4 0 Regulator of RNA terminal phosphate cyclase F-box-like PF12937.7 RKO82790.1 - 5.5e-08 32.6 0.0 1.1e-06 28.4 0.0 2.9 2 1 0 2 2 2 1 F-box-like CENP-B_dimeris PF09026.10 RKO82790.1 - 0.001 19.4 2.6 0.0018 18.6 2.6 1.4 1 0 0 1 1 1 1 Centromere protein B dimerisation domain Radial_spoke PF04712.12 RKO82790.1 - 0.0066 15.5 0.8 0.009 15.0 0.8 1.1 1 0 0 1 1 1 1 Radial spokehead-like protein DNA_pol_phi PF04931.13 RKO82790.1 - 0.012 13.7 6.4 0.017 13.3 6.4 1.1 1 0 0 1 1 1 0 DNA polymerase phi F-box PF00646.33 RKO82790.1 - 0.069 13.0 4.2 3.3 7.7 0.2 2.8 3 0 0 3 3 3 0 F-box domain FAM176 PF14851.6 RKO82790.1 - 0.13 11.9 1.5 0.24 11.1 1.5 1.4 1 0 0 1 1 1 0 FAM176 family RXT2_N PF08595.11 RKO82790.1 - 0.13 12.2 1.1 0.22 11.5 1.1 1.3 1 0 0 1 1 1 0 RXT2-like, N-terminal NOA36 PF06524.12 RKO82790.1 - 0.14 11.5 6.1 0.19 11.0 6.1 1.1 1 0 0 1 1 1 0 NOA36 protein CobT PF06213.12 RKO82790.1 - 4.4 6.6 10.5 1.7 7.9 8.1 1.5 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT Dus PF01207.17 RKO82793.1 - 3.3e-10 39.6 0.0 3.8e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) Y_phosphatase2 PF03162.13 RKO82794.1 - 2.8e-26 92.1 0.0 2.8e-26 92.1 0.0 1.0 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase3 PF13350.6 RKO82794.1 - 2.1e-05 24.6 0.0 2.1e-05 24.6 0.0 1.1 1 0 0 1 1 1 1 Tyrosine phosphatase family DSPc PF00782.20 RKO82794.1 - 0.015 15.1 0.3 0.015 15.1 0.3 1.2 1 1 0 1 1 1 0 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 RKO82794.1 - 0.066 12.8 0.2 0.082 12.5 0.1 1.3 1 1 0 1 1 1 0 Protein-tyrosine phosphatase Radical_SAM PF04055.21 RKO82795.1 - 8.3e-12 45.8 0.0 1.2e-11 45.2 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily OSR1_C PF12202.8 RKO82796.1 - 0.0019 18.4 0.1 0.0033 17.6 0.1 1.4 1 0 0 1 1 1 1 Oxidative-stress-responsive kinase 1 C-terminal domain Bromo_TP_like PF17027.5 RKO82796.1 - 0.027 14.6 0.1 0.042 14.0 0.1 1.3 1 0 0 1 1 1 0 Histone-fold protein KH_1 PF00013.29 RKO82798.1 - 0.00091 19.0 0.0 0.0019 18.0 0.0 1.6 1 0 0 1 1 1 1 KH domain KH_4 PF13083.6 RKO82798.1 - 0.053 13.4 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 KH domain Rib_5-P_isom_A PF06026.14 RKO82799.1 - 3.3e-20 72.4 0.0 3.5e-20 72.3 0.0 1.0 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CLAMP PF14769.6 RKO82800.1 - 5.9e-16 58.7 0.0 3e-10 40.4 0.0 2.4 2 0 0 2 2 2 2 Flagellar C1a complex subunit C1a-32 Casc1_N PF15927.5 RKO82800.1 - 3 7.5 9.4 4.3 7.0 9.4 1.3 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus EF_assoc_2 PF08356.12 RKO82802.1 - 5.2e-37 125.7 0.0 2.1e-36 123.8 0.0 2.0 2 0 0 2 2 2 1 EF hand associated EF_assoc_1 PF08355.12 RKO82802.1 - 1.4e-29 101.5 1.8 2.9e-29 100.5 1.8 1.5 1 0 0 1 1 1 1 EF hand associated Ras PF00071.22 RKO82802.1 - 2.3e-14 53.3 0.1 3.2e-14 52.8 0.1 1.2 1 0 0 1 1 1 1 Ras family EF-hand_7 PF13499.6 RKO82802.1 - 1.2e-06 28.9 2.8 0.032 14.7 0.2 2.9 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 RKO82802.1 - 5.7e-06 25.8 1.5 0.014 15.3 0.0 3.0 3 0 0 3 3 3 2 EF-hand domain EF-hand_10 PF14788.6 RKO82802.1 - 1.3e-05 25.0 4.1 0.0039 17.0 0.5 2.6 2 0 0 2 2 2 2 EF hand EF-hand_1 PF00036.32 RKO82802.1 - 1.9e-05 23.9 6.0 0.017 14.7 0.4 2.7 2 0 0 2 2 2 2 EF hand Roc PF08477.13 RKO82802.1 - 0.00019 21.6 0.0 0.00043 20.5 0.0 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SPARC_Ca_bdg PF10591.9 RKO82802.1 - 0.015 15.6 0.7 3.4 8.0 0.3 2.7 2 1 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 RKO82802.1 - 0.016 15.1 4.3 1.1 9.1 0.1 3.4 3 0 0 3 3 3 0 EF-hand domain pair EF-hand_5 PF13202.6 RKO82802.1 - 0.38 10.3 5.6 0.13 11.8 0.5 2.7 2 0 0 2 2 2 0 EF hand DUF2312 PF10073.9 RKO82802.1 - 1.1 8.9 3.3 5.4 6.7 0.0 2.9 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) EMC1_C PF07774.13 RKO82803.1 - 5.5e-55 186.3 0.0 1.1e-54 185.4 0.0 1.5 1 0 0 1 1 1 1 ER membrane protein complex subunit 1, C-terminal NUDIX PF00293.28 RKO82804.1 - 0.027 14.5 0.7 0.64 10.1 0.1 3.0 3 1 0 3 3 3 0 NUDIX domain Galactosyl_T PF01762.21 RKO82805.1 - 0.081 12.7 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Galactosyltransferase Pox_MCEL PF03291.16 RKO82806.1 - 2.1e-90 303.2 0.0 2.9e-90 302.7 0.0 1.1 1 0 0 1 1 1 1 mRNA capping enzyme Methyltransf_25 PF13649.6 RKO82806.1 - 1e-16 61.4 0.0 1.9e-16 60.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 RKO82806.1 - 9.8e-12 45.0 0.0 1.4e-11 44.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 RKO82806.1 - 1.3e-11 45.0 0.0 2.3e-11 44.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO82806.1 - 2.4e-11 43.7 0.0 3.9e-11 43.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 RKO82806.1 - 3.7e-10 40.4 0.0 6.1e-10 39.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 RKO82806.1 - 1.2e-06 28.1 0.0 1.8e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family NNMT_PNMT_TEMT PF01234.17 RKO82806.1 - 0.00013 21.3 0.0 0.0002 20.7 0.0 1.3 1 0 0 1 1 1 1 NNMT/PNMT/TEMT family FtsJ PF01728.19 RKO82806.1 - 0.0037 17.4 0.0 0.0061 16.7 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_20 PF12147.8 RKO82806.1 - 0.017 14.3 0.0 0.024 13.8 0.0 1.1 1 0 0 1 1 1 0 Putative methyltransferase MetW PF07021.12 RKO82806.1 - 0.02 14.5 0.2 0.06 12.9 0.2 1.9 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW TPMT PF05724.11 RKO82806.1 - 0.022 14.4 0.0 0.032 13.9 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) NodS PF05401.11 RKO82806.1 - 0.032 13.8 0.0 0.056 13.1 0.0 1.4 1 0 0 1 1 1 0 Nodulation protein S (NodS) PrmA PF06325.13 RKO82806.1 - 0.038 13.4 0.0 0.067 12.6 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 RKO82806.1 - 0.046 13.0 0.1 0.16 11.3 0.0 1.9 1 1 0 2 2 2 0 Mycolic acid cyclopropane synthetase MTS PF05175.14 RKO82806.1 - 0.13 11.8 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_18 PF12847.7 RKO82806.1 - 0.15 11.9 0.0 0.27 11.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_15 PF09445.10 RKO82806.1 - 0.17 11.5 0.0 0.33 10.5 0.0 1.6 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase NAD_binding_10 PF13460.6 RKO82810.1 - 1.4e-05 25.1 0.0 3.2e-05 23.9 0.0 1.6 1 1 1 2 2 2 1 NAD(P)H-binding Semialdhyde_dh PF01118.24 RKO82810.1 - 0.025 15.0 0.0 0.039 14.4 0.0 1.3 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain Polysacc_synt_2 PF02719.15 RKO82810.1 - 0.12 11.5 0.0 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DapB_N PF01113.20 RKO82810.1 - 0.18 11.9 0.0 0.28 11.3 0.0 1.3 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus DUF4032 PF13224.6 RKO82811.1 - 0.13 12.2 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4032) Nup192 PF11894.8 RKO82812.1 - 1.2e-17 62.5 0.4 6.3e-10 36.9 0.0 2.0 1 1 1 2 2 2 2 Nuclear pore complex scaffold, nucleoporins 186/192/205 BioW PF03744.13 RKO82812.1 - 0.086 12.4 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 6-carboxyhexanoate--CoA ligase COPIIcoated_ERV PF07970.12 RKO82813.1 - 2.6e-86 289.1 2.5 2.9e-86 288.9 2.5 1.0 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter DUF4203 PF13886.6 RKO82815.1 - 0.00029 20.6 0.5 0.00037 20.2 0.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) NmrA PF05368.13 RKO82816.1 - 3.2e-13 49.8 0.0 4.4e-13 49.3 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 RKO82816.1 - 1.8e-05 24.7 0.0 0.00083 19.3 0.0 2.9 2 1 0 2 2 2 1 NAD(P)H-binding UCR_UQCRX_QCR9 PF05365.12 RKO82818.1 - 0.0092 15.9 0.3 0.019 14.9 0.3 1.4 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like zf-CHCC PF10276.9 RKO82820.1 - 1.3 9.2 4.3 24 5.1 0.1 3.1 3 0 0 3 3 3 0 Zinc-finger domain Integrase_H2C2 PF17921.1 RKO82821.1 - 2e-08 34.2 0.1 3.4e-08 33.5 0.1 1.4 1 0 0 1 1 1 1 Integrase zinc binding domain DNA_methylase PF00145.17 RKO82825.1 - 2.7e-23 82.9 0.0 3.7e-16 59.4 0.0 2.1 1 1 1 2 2 2 2 C-5 cytosine-specific DNA methylase Barwin PF00967.17 RKO82826.1 - 0.0095 15.8 1.9 0.031 14.1 1.7 1.8 1 1 1 2 2 2 1 Barwin family DPBB_1 PF03330.18 RKO82826.1 - 0.011 16.0 0.0 0.017 15.4 0.0 1.4 1 0 0 1 1 1 0 Lytic transglycolase adh_short PF00106.25 RKO82827.1 - 6.2e-24 84.5 0.1 6.9e-24 84.4 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO82827.1 - 1.1e-13 51.3 0.0 1.3e-13 51.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 RKO82827.1 - 2.4e-08 34.1 0.1 2.8e-08 33.9 0.1 1.0 1 0 0 1 1 1 1 KR domain AdoHcyase_NAD PF00670.21 RKO82827.1 - 0.019 15.0 0.4 0.025 14.7 0.4 1.2 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FeS PF04060.13 RKO82827.1 - 0.045 13.4 1.6 0.4 10.4 0.1 2.8 2 1 1 3 3 3 0 Putative Fe-S cluster THF_DHG_CYH_C PF02882.19 RKO82827.1 - 0.067 12.5 0.1 0.086 12.1 0.1 1.3 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Epimerase PF01370.21 RKO82827.1 - 0.073 12.5 0.0 0.081 12.4 0.0 1.1 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family 3HCDH_N PF02737.18 RKO82827.1 - 0.08 12.8 0.2 0.089 12.7 0.2 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 RKO82827.1 - 0.13 12.3 1.1 0.21 11.7 1.0 1.3 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 RKO82827.1 - 0.21 12.0 0.9 0.35 11.3 0.9 1.4 1 1 0 1 1 1 0 Putative NAD(P)-binding DNA_pol_phi PF04931.13 RKO82828.1 - 4.9 5.1 4.2 6.8 4.7 4.2 1.1 1 0 0 1 1 1 0 DNA polymerase phi ArAE_2 PF10334.9 RKO82830.1 - 2.5e-06 27.5 0.0 3.5e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 Aromatic acid exporter family member 2 Kinocilin PF15033.6 RKO82830.1 - 1.5 8.5 3.2 1.1 9.0 0.7 2.1 2 0 0 2 2 2 0 Kinocilin protein FUSC_2 PF13515.6 RKO82830.1 - 1.9 8.6 14.9 0.13 12.4 7.6 2.5 1 1 1 2 2 2 0 Fusaric acid resistance protein-like Asparaginase PF00710.20 RKO82831.1 - 5.7e-60 202.1 0.0 7.9e-60 201.7 0.0 1.2 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 RKO82831.1 - 2.3e-21 76.2 0.0 4.1e-21 75.3 0.0 1.4 1 0 0 1 1 1 1 Glutaminase/Asparaginase C-terminal domain Histone PF00125.24 RKO82832.1 - 3.7e-20 72.6 0.1 4.6e-20 72.3 0.1 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 RKO82832.1 - 1.2e-07 31.9 0.0 2.1e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID_20kDa PF03847.13 RKO82832.1 - 0.00039 20.9 0.0 0.00064 20.2 0.0 1.3 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A TAF PF02969.17 RKO82832.1 - 0.085 13.0 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 TATA box binding protein associated factor (TAF) YscO-like PF16789.5 RKO82832.1 - 0.1 12.6 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 YscO-like protein PAP_central PF04928.17 RKO82833.1 - 5.6e-06 25.5 0.0 7.6e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 Poly(A) polymerase central domain DUF410 PF04190.13 RKO82835.1 - 1.6e-57 195.3 0.0 1.8e-57 195.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF410) Swi6_N PF18530.1 RKO82835.1 - 0.22 11.7 0.0 0.4 10.8 0.0 1.3 1 0 0 1 1 1 0 Swi6 N-terminal domain DUF3486 PF11985.8 RKO82836.1 - 0.14 12.6 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3486) Ribosomal_S13_N PF08069.12 RKO82837.1 - 0.0013 18.7 0.3 0.0023 17.9 0.3 1.4 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain ThiF PF00899.21 RKO82838.1 - 1.4e-39 135.9 0.0 1.7e-39 135.6 0.0 1.0 1 0 0 1 1 1 1 ThiF family E1_4HB PF16191.5 RKO82838.1 - 0.0049 17.0 0.0 0.0091 16.2 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin-activating enzyme E1 four-helix bundle CPSase_L_D3 PF02787.19 RKO82840.1 - 7.4e-42 142.6 0.0 1.5e-41 141.6 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPSase_L_D2 PF02786.17 RKO82840.1 - 6.9e-29 100.9 0.0 1.3e-28 100.0 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.13 RKO82840.1 - 8.8e-10 38.4 0.1 1.6e-09 37.6 0.1 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 RKO82840.1 - 1.1e-09 38.1 0.1 2.5e-09 37.0 0.0 1.6 2 0 0 2 2 2 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 RKO82840.1 - 4.4e-06 26.5 0.0 1.4e-05 24.9 0.0 1.8 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 RKO82840.1 - 0.0015 18.6 0.1 0.003 17.6 0.1 1.6 1 0 0 1 1 1 1 ATP-grasp domain TrkA_N PF02254.18 RKO82840.1 - 0.011 16.0 0.0 0.036 14.3 0.0 1.9 1 0 0 1 1 1 0 TrkA-N domain Ligase_CoA PF00549.19 RKO82841.1 - 8.8e-25 87.3 0.0 1.5e-24 86.6 0.0 1.3 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 RKO82841.1 - 2.8e-10 40.1 0.0 1e-09 38.3 0.0 1.9 1 1 1 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding PF02629.19 RKO82841.1 - 2.3e-07 31.4 2.2 2.3e-07 31.4 2.2 1.9 2 0 0 2 2 2 1 CoA binding domain CoA_binding_2 PF13380.6 RKO82841.1 - 0.084 13.4 0.1 0.27 11.8 0.1 1.9 2 0 0 2 2 2 0 CoA binding domain Myosin_head PF00063.21 RKO82842.1 - 2.4e-77 260.7 0.0 2.9e-77 260.5 0.0 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) MauJ PF17419.2 RKO82842.1 - 0.037 13.5 0.0 0.061 12.8 0.0 1.3 1 0 0 1 1 1 0 Methylamine utilization protein MauJ SH3_9 PF14604.6 RKO82843.1 - 1.4e-07 31.3 0.0 2.1e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO82843.1 - 2.3e-07 30.3 0.0 3e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 RKO82843.1 - 0.016 14.9 0.0 0.024 14.3 0.0 1.3 1 0 0 1 1 1 0 Variant SH3 domain zf-CCHH PF10283.9 RKO82844.1 - 4.6e-11 42.5 1.7 7.6e-11 41.8 1.7 1.3 1 0 0 1 1 1 1 PBZ domain TT_ORF2 PF02957.15 RKO82844.1 - 0.11 13.4 4.2 0.2 12.6 1.4 2.2 2 0 0 2 2 2 0 TT viral ORF2 Ribosomal_60s PF00428.19 RKO82844.1 - 3.7 8.2 16.8 2.9 8.5 8.7 2.6 2 1 0 2 2 2 0 60s Acidic ribosomal protein HATPase_c PF02518.26 RKO82847.1 - 0.0022 18.5 0.0 0.0028 18.1 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Glyco_hydro_16 PF00722.21 RKO82850.1 - 1.5e-10 40.8 2.8 1.4e-09 37.7 2.8 2.2 1 1 0 1 1 1 1 Glycosyl hydrolases family 16 SOG2 PF10428.9 RKO82850.1 - 0.16 11.1 7.5 0.22 10.7 7.5 1.2 1 0 0 1 1 1 0 RAM signalling pathway protein dCMP_cyt_deam_1 PF00383.23 RKO82853.1 - 4.8e-06 26.4 0.0 6.4e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 RKO82853.1 - 0.042 13.6 0.0 0.048 13.4 0.0 1.1 1 0 0 1 1 1 0 MafB19-like deaminase PIG-L PF02585.17 RKO82854.1 - 1.4e-16 61.3 0.0 4e-16 59.8 0.0 1.7 1 1 0 1 1 1 1 GlcNAc-PI de-N-acetylase UBA PF00627.31 RKO82855.1 - 1.9e-07 30.8 0.6 1.9e-07 30.8 0.6 2.9 4 0 0 4 4 4 1 UBA/TS-N domain GerD PF17898.1 RKO82855.1 - 0.042 13.8 4.6 0.24 11.3 4.5 2.0 1 1 0 1 1 1 0 Spore germination GerD central core domain STI1 PF17830.1 RKO82855.1 - 0.077 12.9 17.1 0.059 13.3 3.7 3.2 2 1 1 3 3 3 0 STI1 domain SSP160 PF06933.11 RKO82855.1 - 0.12 10.6 7.5 0.17 10.0 7.5 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Cytochrome_cB PF11783.8 RKO82856.1 - 0.022 14.7 0.0 0.03 14.2 0.0 1.2 1 0 0 1 1 1 0 Cytochrome c bacterial rve PF00665.26 RKO82857.1 - 0.00037 20.7 0.1 0.0015 18.7 0.0 2.0 2 1 1 3 3 3 1 Integrase core domain Spindle_Spc25 PF08234.12 RKO82859.1 - 5.6e-25 87.4 1.4 7.6e-25 86.9 0.3 1.8 2 0 0 2 2 2 1 Chromosome segregation protein Spc25 DUF4407 PF14362.6 RKO82859.1 - 0.7 9.2 6.6 0.95 8.8 6.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Golgin_A5 PF09787.9 RKO82859.1 - 0.7 9.3 17.8 1.1 8.6 17.8 1.3 1 0 0 1 1 1 0 Golgin subfamily A member 5 OmpH PF03938.14 RKO82859.1 - 2.4 8.5 16.6 4.9 7.5 16.6 1.5 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) UPF0242 PF06785.11 RKO82859.1 - 2.8 8.0 18.1 5.2 7.1 18.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4207 PF13904.6 RKO82859.1 - 8.2 6.0 19.1 31 4.2 19.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4207) V_ATPase_I PF01496.19 RKO82859.1 - 9.5 4.0 8.9 12 3.7 8.9 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Phlebovirus_NSM PF07246.11 RKO82859.1 - 9.9 5.4 11.4 13 5.0 11.4 1.1 1 0 0 1 1 1 0 Phlebovirus nonstructural protein NS-M DUF2040 PF09745.9 RKO82860.1 - 1.2e-08 35.0 1.9 1.2e-08 35.0 1.9 1.7 2 0 0 2 2 2 1 Coiled-coil domain-containing protein 55 (DUF2040) Arrestin_N PF00339.29 RKO82865.1 - 6.1e-14 52.3 0.0 1.3e-13 51.3 0.0 1.5 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Arrestin_C PF02752.22 RKO82865.1 - 9.8e-13 48.7 0.2 2e-11 44.5 0.2 2.0 2 0 0 2 2 2 1 Arrestin (or S-antigen), C-terminal domain Rgp1 PF08737.10 RKO82865.1 - 0.00066 19.0 0.3 0.41 9.8 0.0 2.1 2 0 0 2 2 2 2 Rgp1 LDB19 PF13002.7 RKO82865.1 - 0.046 13.4 0.0 0.082 12.6 0.0 1.4 1 0 0 1 1 1 0 Arrestin_N terminal like YL1_C PF08265.11 RKO82865.1 - 0.1 12.4 0.0 0.29 10.9 0.0 1.8 1 0 0 1 1 1 0 YL1 nuclear protein C-terminal domain Pkinase PF00069.25 RKO82870.1 - 1.2e-18 67.5 0.0 1.8e-18 66.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO82870.1 - 2e-07 30.5 0.1 3e-06 26.7 0.1 2.0 1 1 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO82870.1 - 0.0055 16.7 0.0 0.0095 15.9 0.0 1.5 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 RKO82871.1 - 0.0039 16.6 0.0 0.0049 16.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO82871.1 - 0.17 11.1 0.0 0.22 10.8 0.0 1.1 1 0 0 1 1 1 0 Protein tyrosine kinase Ank_4 PF13637.6 RKO82872.1 - 1.5e-12 47.7 0.8 0.00018 22.0 0.1 4.4 3 1 0 3 3 3 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO82872.1 - 4.3e-09 36.5 0.3 0.071 13.5 0.0 4.7 2 1 3 5 5 5 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO82872.1 - 5e-06 27.0 0.0 0.12 13.0 0.0 3.2 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO82872.1 - 0.00027 21.1 0.0 1.7 9.5 0.0 4.3 4 0 0 4 4 4 1 Ankyrin repeat DUF1843 PF08898.10 RKO82872.1 - 0.053 14.0 0.3 0.55 10.8 0.0 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF1843) FANCI_S3 PF14677.6 RKO82875.1 - 7.9e-23 81.3 0.0 8.4e-22 77.9 0.0 2.1 1 1 0 1 1 1 1 FANCI solenoid 3 FANCI_HD2 PF14680.6 RKO82875.1 - 5.5e-14 52.0 0.0 9.2e-14 51.3 0.0 1.3 1 0 0 1 1 1 1 FANCI helical domain 2 VHS PF00790.19 RKO82876.1 - 1.8e-34 118.6 0.0 2.7e-34 118.1 0.0 1.2 1 0 0 1 1 1 1 VHS domain Luteo_P1-P2 PF08467.10 RKO82876.1 - 0.11 11.7 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 Luteovirus RNA polymerase P1-P2/replicase DICT PF10069.9 RKO82878.1 - 0.039 13.7 0.1 0.082 12.7 0.1 1.5 1 0 0 1 1 1 0 Sensory domain in DIguanylate Cyclases and Two-component system Peptidase_S9 PF00326.21 RKO82879.1 - 2.2e-14 53.4 0.0 3.1e-14 52.9 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Cyclin_N PF00134.23 RKO82881.1 - 1.8e-06 27.7 0.0 2.9e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 RKO82881.1 - 0.16 12.3 0.0 0.23 11.8 0.0 1.3 1 0 0 1 1 1 0 Cyclin Ribonuclease_T2 PF00445.18 RKO82886.1 - 0.00043 20.6 0.0 0.00078 19.7 0.0 1.3 1 0 0 1 1 1 1 Ribonuclease T2 family CAP_N PF01213.19 RKO82886.1 - 0.0093 15.5 0.6 0.012 15.1 0.6 1.2 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) N terminal Mito_fiss_reg PF05308.11 RKO82886.1 - 0.11 12.5 0.1 0.15 12.1 0.1 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator PRIMA1 PF16101.5 RKO82886.1 - 1.3 9.0 4.5 2.9 7.9 4.5 1.5 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 EFG_C PF00679.24 RKO82887.1 - 2.1e-15 56.5 0.0 3.8e-15 55.7 0.0 1.4 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 RKO82887.1 - 1e-06 29.0 0.4 2.4e-06 27.9 0.4 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 Pkinase PF00069.25 RKO82889.1 - 2.6e-62 210.6 0.0 2.9e-62 210.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO82889.1 - 4.4e-32 111.4 0.0 5.2e-32 111.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO82889.1 - 2.3e-07 30.4 0.0 3e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 RKO82889.1 - 0.00028 20.9 0.1 0.0011 18.9 0.0 1.9 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 RKO82889.1 - 0.0034 16.2 0.0 0.0045 15.8 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 RKO82889.1 - 0.009 15.4 0.0 0.011 15.1 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 RKO82889.1 - 0.16 11.5 0.1 0.2 11.2 0.1 1.1 1 0 0 1 1 1 0 RIO1 family FA_hydroxylase PF04116.13 RKO82890.1 - 5.7e-26 91.4 12.7 5.7e-26 91.4 12.7 2.0 2 0 0 2 2 2 1 Fatty acid hydroxylase superfamily Pro_dh PF01619.18 RKO82891.1 - 2.4e-41 142.2 0.0 2.7e-41 142.0 0.0 1.0 1 0 0 1 1 1 1 Proline dehydrogenase RgpF PF05045.12 RKO82893.1 - 0.0012 17.7 0.0 0.11 11.2 0.0 2.1 2 0 0 2 2 2 2 Rhamnan synthesis protein F bZIP_1 PF00170.21 RKO82894.1 - 0.021 14.9 1.7 0.021 14.9 1.7 3.4 2 1 1 3 3 3 0 bZIP transcription factor TMCO5 PF14992.6 RKO82894.1 - 0.15 11.6 12.6 0.19 11.3 12.6 1.1 1 0 0 1 1 1 0 TMCO5 family zf-CCCH_6 PF18585.1 RKO82894.1 - 1.6 8.7 3.2 5.9 6.9 0.2 2.6 2 1 0 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 Mod_r PF07200.13 RKO82894.1 - 3.7 7.6 15.5 1.4 9.0 11.5 1.9 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein OMPdecase PF00215.24 RKO82895.1 - 2.8e-06 27.1 0.1 3.4e-06 26.8 0.1 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Mucin PF01456.17 RKO82896.1 - 1.3 9.0 22.3 1.7 8.6 22.3 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein NolX PF05819.11 RKO82896.1 - 1.7 7.9 9.3 1.9 7.7 9.3 1.2 1 0 0 1 1 1 0 NolX protein WBS_methylT PF12589.8 RKO82899.1 - 0.3 11.9 9.5 0.53 11.1 9.5 1.4 1 0 0 1 1 1 0 Methyltransferase involved in Williams-Beuren syndrome CAF1A PF12253.8 RKO82901.1 - 2.4 8.4 7.3 6.1 7.1 0.3 2.8 3 0 0 3 3 3 0 Chromatin assembly factor 1 subunit A PKK PF12474.8 RKO82904.1 - 0.27 11.4 14.9 0.59 10.3 8.8 2.7 1 1 1 2 2 2 0 Polo kinase kinase ADIP PF11559.8 RKO82904.1 - 9 6.4 16.8 0.23 11.5 2.9 3.2 2 1 2 4 4 4 0 Afadin- and alpha -actinin-Binding E1-E2_ATPase PF00122.20 RKO82905.1 - 1.8e-16 60.2 0.1 2.3e-16 59.9 0.1 1.2 1 0 0 1 1 1 1 E1-E2 ATPase Arrestin_C PF02752.22 RKO82906.1 - 0.003 18.0 0.0 0.0055 17.2 0.0 1.4 1 0 0 1 1 1 1 Arrestin (or S-antigen), C-terminal domain DUF1639 PF07797.14 RKO82908.1 - 0.16 12.0 0.1 0.28 11.2 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) Aldedh PF00171.22 RKO82909.1 - 6.9e-65 219.3 0.0 9.5e-65 218.9 0.0 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 RKO82909.1 - 0.12 11.8 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1487) PTH2 PF01981.16 RKO82910.1 - 1.1e-20 74.0 0.3 1.3e-20 73.8 0.3 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 PQQ_2 PF13360.6 RKO82911.1 - 0.00011 21.8 0.0 0.00013 21.6 0.0 1.2 1 0 0 1 1 1 1 PQQ-like domain PQQ_3 PF13570.6 RKO82911.1 - 0.00054 20.4 0.5 0.016 15.7 0.0 2.8 3 1 0 3 3 3 1 PQQ-like domain DUF1522 PF07482.11 RKO82911.1 - 0.081 13.2 0.1 0.13 12.6 0.1 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1522) MAP65_ASE1 PF03999.12 RKO82912.1 - 0.18 10.5 0.5 0.2 10.3 0.5 1.0 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) Transglut_prok PF09017.10 RKO82912.1 - 0.27 10.5 4.3 0.33 10.2 4.3 1.1 1 0 0 1 1 1 0 Microbial transglutaminase FIT1_2 PF17357.2 RKO82912.1 - 1.1 9.3 13.1 2 8.6 12.9 1.5 1 1 0 1 1 1 0 Facilitor Of iron transport 1 and 2 rve_3 PF13683.6 RKO82915.1 - 0.099 12.4 0.6 0.24 11.2 0.1 1.9 2 0 0 2 2 2 0 Integrase core domain bZIP_1 PF00170.21 RKO82915.1 - 0.1 12.7 6.7 0.32 11.1 0.1 2.9 2 1 0 2 2 2 0 bZIP transcription factor Bul1_C PF04426.12 RKO82915.1 - 0.11 11.9 1.6 0.15 11.5 1.6 1.3 1 0 0 1 1 1 0 Bul1 C terminus TPR_MLP1_2 PF07926.12 RKO82915.1 - 0.29 11.2 23.1 0.33 11.0 5.0 2.9 1 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein DNA_pol_A_exo1 PF01612.20 RKO82918.1 - 9.3e-38 129.7 0.5 1.3e-37 129.2 0.5 1.2 1 0 0 1 1 1 1 3'-5' exonuclease HRDC PF00570.23 RKO82918.1 - 2.9e-13 49.6 0.0 7.2e-13 48.3 0.0 1.7 1 0 0 1 1 1 1 HRDC domain Serglycin PF04360.12 RKO82918.1 - 0.54 10.2 2.0 1.3 8.9 2.0 1.6 1 0 0 1 1 1 0 Serglycin DUF2476 PF10630.9 RKO82919.1 - 1.4 9.0 7.6 2.2 8.4 7.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2476) DUF3712 PF12505.8 RKO82920.1 - 6.5e-10 39.3 0.3 6.5e-10 39.3 0.3 2.6 4 1 0 4 4 4 1 Protein of unknown function (DUF3712) LEA_2 PF03168.13 RKO82920.1 - 0.12 12.9 0.4 9.5 6.8 0.1 3.3 3 1 1 4 4 4 0 Late embryogenesis abundant protein Glyco_hydro_28 PF00295.17 RKO82921.1 - 1.2e-38 133.0 9.1 1.4e-38 132.7 9.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 DUF4681 PF15732.5 RKO82923.1 - 0.22 11.8 1.3 0.41 10.9 1.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4681) Lipase_3 PF01764.25 RKO82925.1 - 3.3e-09 36.8 0.0 3.9e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) RSN1_7TM PF02714.15 RKO82933.1 - 1.5e-64 218.0 19.3 1.5e-64 218.0 19.3 1.5 2 0 0 2 2 2 1 Calcium-dependent channel, 7TM region, putative phosphate PHM7_ext PF12621.8 RKO82933.1 - 1.9e-08 34.4 0.0 3.5e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 Extracellular tail, of 10TM putative phosphate transporter DUF3246 PF11596.8 RKO82933.1 - 0.1 12.0 0.2 0.16 11.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3246) Glycos_transf_2 PF00535.26 RKO82934.1 - 2.2e-30 105.7 0.0 3e-30 105.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 RKO82934.1 - 1.7e-12 47.7 0.0 2.4e-12 47.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 RKO82934.1 - 0.0017 17.8 0.0 0.0025 17.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 RKO82934.1 - 0.0048 16.4 0.0 0.0073 15.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 RKO82934.1 - 0.019 15.5 0.0 0.047 14.2 0.0 1.7 1 1 0 1 1 1 0 Glycosyl transferase family 2 Pkinase PF00069.25 RKO82935.1 - 2.5e-09 36.9 0.6 0.0018 17.7 0.0 2.2 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 RKO82935.1 - 2.4e-05 23.8 0.1 0.00013 21.4 0.0 1.9 2 0 0 2 2 2 1 Protein tyrosine kinase Gpr1_Fun34_YaaH PF01184.19 RKO82936.1 - 7.5e-27 94.3 4.7 7.9e-27 94.2 4.7 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family DUF2393 PF09624.10 RKO82936.1 - 0.22 11.5 3.4 0.34 10.9 3.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) Arteri_Gl PF00951.18 RKO82936.1 - 1.4 8.7 6.4 1.5 8.6 6.4 1.2 1 1 0 1 1 1 0 Arterivirus GL envelope glycoprotein DLH PF01738.18 RKO82940.1 - 0.03 13.9 0.0 0.034 13.7 0.0 1.0 1 0 0 1 1 1 0 Dienelactone hydrolase family DLH PF01738.18 RKO82941.1 - 2e-16 60.2 0.0 2.3e-16 60.0 0.0 1.0 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_1 PF00561.20 RKO82941.1 - 0.0019 17.9 0.0 0.003 17.3 0.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 RKO82941.1 - 0.013 15.0 0.0 0.017 14.6 0.0 1.1 1 0 0 1 1 1 0 Prolyl oligopeptidase family Abhydrolase_2 PF02230.16 RKO82941.1 - 0.05 13.4 0.0 0.091 12.6 0.0 1.4 1 1 0 1 1 1 0 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.8 RKO82941.1 - 0.059 12.6 0.3 1.2 8.3 0.0 2.1 1 1 1 2 2 2 0 Serine aminopeptidase, S33 PGM_PMM_I PF02878.16 RKO82941.1 - 0.12 12.0 0.0 0.24 11.1 0.0 1.5 2 0 0 2 2 2 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGAP1 PF07819.13 RKO82941.1 - 0.14 11.8 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 PGAP1-like protein Ribonuc_L-PSP PF01042.21 RKO82943.1 - 2.4e-45 153.5 0.7 2.6e-45 153.3 0.7 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP Mt_ATP-synt_D PF05873.12 RKO82943.1 - 0.049 13.5 0.0 0.059 13.2 0.0 1.1 1 0 0 1 1 1 0 ATP synthase D chain, mitochondrial (ATP5H) DIL PF01843.19 RKO82944.1 - 5e-16 58.9 0.2 1.3e-15 57.5 0.2 1.8 1 0 0 1 1 1 1 DIL domain DUF2451 PF10474.9 RKO82944.1 - 0.024 14.4 0.0 0.058 13.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2451) Not1 PF04054.15 RKO82945.1 - 3.4e-17 62.4 0.8 1e-16 60.9 0.8 1.8 1 0 0 1 1 1 1 CCR4-Not complex component, Not1 WH2 PF02205.20 RKO82946.1 - 1.7e-10 40.3 0.8 2.9e-10 39.6 0.8 1.4 1 0 0 1 1 1 1 WH2 motif NABP PF07990.12 RKO82946.1 - 0.18 11.3 1.8 0.27 10.7 1.8 1.2 1 0 0 1 1 1 0 Nucleic acid binding protein NABP DUF3246 PF11596.8 RKO82946.1 - 2.6 7.4 13.3 4.7 6.6 13.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3246) GA PF01468.17 RKO82946.1 - 3.1 8.1 8.3 19 5.6 3.6 2.7 1 1 1 2 2 2 0 GA module RR_TM4-6 PF06459.12 RKO82946.1 - 8.8 6.1 11.1 15 5.3 11.1 1.3 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 SMC_N PF02463.19 RKO82947.1 - 5.9e-34 117.4 1.9 4.1e-33 114.7 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 RKO82947.1 - 3.7e-12 47.2 6.9 1.1e-11 45.6 6.9 1.8 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 RKO82947.1 - 4.9e-11 42.9 0.0 8e-11 42.2 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 RKO82947.1 - 1.2e-06 28.6 0.1 3.6e-06 27.0 0.0 1.8 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 RKO82947.1 - 7.2e-05 22.5 0.0 0.00016 21.3 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain zf-C4H2 PF10146.9 RKO82947.1 - 0.00045 20.6 4.8 0.00067 20.0 4.8 1.3 1 0 0 1 1 1 1 Zinc finger-containing protein Spc7 PF08317.11 RKO82947.1 - 0.0049 15.8 9.0 0.0064 15.4 9.0 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein GAS PF13851.6 RKO82947.1 - 0.12 11.8 11.2 0.4 10.0 1.8 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding APG6_N PF17675.1 RKO82947.1 - 0.12 12.9 16.6 0.53 10.8 6.9 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region ABC_tran PF00005.27 RKO82947.1 - 0.16 12.5 2.8 0.27 11.7 0.0 2.3 2 1 0 2 2 2 0 ABC transporter Nup88 PF10168.9 RKO82947.1 - 0.24 9.1 6.9 0.34 8.7 6.9 1.1 1 0 0 1 1 1 0 Nuclear pore component AAA_33 PF13671.6 RKO82947.1 - 0.81 9.8 3.8 8.4 6.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain DUF3844 PF12955.7 RKO82948.1 - 9.7e-17 61.0 1.9 1.6e-16 60.3 1.9 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3844) Toxin_11 PF07473.11 RKO82948.1 - 1.9 8.6 7.9 0.27 11.4 2.7 2.3 2 0 0 2 2 2 0 Spasmodic peptide gm9a; conotoxin from Conus species hEGF PF12661.7 RKO82948.1 - 4.4 8.1 6.1 10 6.9 6.1 1.7 1 0 0 1 1 1 0 Human growth factor-like EGF Zw10 PF06248.13 RKO82949.1 - 2.2e-57 194.9 0.0 2.9e-57 194.5 0.0 1.0 1 0 0 1 1 1 1 Centromere/kinetochore Zw10 CENP-F_leu_zip PF10473.9 RKO82950.1 - 5.6e-07 29.7 41.7 0.087 12.8 1.5 8.3 1 1 6 8 8 8 4 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GAS PF13851.6 RKO82950.1 - 3.6e-06 26.5 39.5 0.048 13.0 1.4 7.6 2 1 9 11 11 11 8 Growth-arrest specific micro-tubule binding TMF_TATA_bd PF12325.8 RKO82950.1 - 0.00038 20.6 55.2 0.12 12.6 0.1 10.3 2 2 9 11 11 11 4 TATA element modulatory factor 1 TATA binding Spc7 PF08317.11 RKO82950.1 - 0.003 16.5 60.9 0.25 10.2 4.8 6.4 1 1 4 6 6 6 4 Spc7 kinetochore protein Fez1 PF06818.15 RKO82950.1 - 0.12 12.8 49.2 0.15 12.5 1.1 6.0 1 1 3 5 5 5 0 Fez1 ATG16 PF08614.11 RKO82950.1 - 0.28 11.4 89.5 0.096 12.9 5.3 6.5 2 2 2 5 5 5 0 Autophagy protein 16 (ATG16) DUF4201 PF13870.6 RKO82950.1 - 0.9 9.2 20.2 7.7 6.2 0.4 7.4 2 2 4 7 7 7 0 Domain of unknown function (DUF4201) Noelin-1 PF12308.8 RKO82950.1 - 0.93 9.5 3.9 9 6.3 0.1 4.1 5 0 0 5 5 5 0 Neurogenesis glycoprotein NuA4 PF09340.10 RKO82950.1 - 2.3 8.1 4.3 55 3.7 0.0 4.8 5 1 2 7 7 7 0 Histone acetyltransferase subunit NuA4 APG6_N PF17675.1 RKO82950.1 - 2.4 8.7 89.8 0.11 13.0 2.4 9.4 1 1 7 8 8 7 0 Apg6 coiled-coil region NPV_P10 PF05531.12 RKO82950.1 - 4.6 7.8 17.3 15 6.1 0.2 6.6 4 2 2 6 6 6 0 Nucleopolyhedrovirus P10 protein DUF1664 PF07889.12 RKO82950.1 - 5.1 7.2 17.6 30 4.7 0.6 6.8 2 2 8 11 11 11 0 Protein of unknown function (DUF1664) B12D PF06522.11 RKO82951.1 - 9.1e-05 22.2 0.0 9.5e-05 22.1 0.0 1.1 1 0 0 1 1 1 1 NADH-ubiquinone reductase complex 1 MLRQ subunit B12D PF06522.11 RKO82952.1 - 0.00059 19.6 0.0 0.0006 19.6 0.0 1.1 1 0 0 1 1 1 1 NADH-ubiquinone reductase complex 1 MLRQ subunit DUF2818 PF10993.8 RKO82953.1 - 0.17 12.4 0.0 0.29 11.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2818) mRNA_cap_enzyme PF01331.19 RKO82954.1 - 3.1e-09 37.0 0.0 3.2e-09 36.9 0.0 1.0 1 0 0 1 1 1 1 mRNA capping enzyme, catalytic domain DNA_ligase_A_M PF01068.21 RKO82954.1 - 0.073 12.7 0.0 0.078 12.6 0.0 1.0 1 0 0 1 1 1 0 ATP dependent DNA ligase domain mRNA_cap_enzyme PF01331.19 RKO82955.1 - 1.3e-06 28.4 0.0 1.5e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 mRNA capping enzyme, catalytic domain HTH_34 PF13601.6 RKO82955.1 - 0.027 14.7 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain BCS1_N PF08740.11 RKO82956.1 - 1.7e-48 165.1 0.0 2e-48 164.9 0.0 1.1 1 0 0 1 1 1 1 BCS1 N terminal Acetyltransf_13 PF13880.6 RKO82959.1 - 0.14 12.2 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase DLIC PF05783.11 RKO82962.1 - 0.00062 18.7 0.0 0.0022 16.9 0.0 1.8 2 0 0 2 2 2 1 Dynein light intermediate chain (DLIC) DUF4875 PF16175.5 RKO82965.1 - 0.11 12.6 1.1 0.24 11.5 0.8 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4875) Ferritin PF00210.24 RKO82967.1 - 2.9e-35 121.3 1.1 3.9e-35 120.9 1.1 1.1 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 RKO82967.1 - 0.00037 20.9 0.6 0.00057 20.3 0.6 1.3 1 0 0 1 1 1 1 Rubrerythrin Sa_NUDIX PF18167.1 RKO82967.1 - 0.046 13.5 0.0 0.088 12.6 0.0 1.5 1 0 0 1 1 1 0 SMODS-associated NUDIX domain Lipase_GDSL PF00657.22 RKO82968.1 - 2.3e-08 34.3 0.0 1.2e-07 32.0 0.0 1.9 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase Lipase_GDSL_2 PF13472.6 RKO82968.1 - 4.4e-07 30.5 0.1 7.1e-07 29.8 0.1 1.4 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Ribosomal_L7Ae PF01248.26 RKO82971.1 - 4.9e-23 80.7 0.8 1.3e-22 79.4 0.4 1.9 2 0 0 2 2 2 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CLPTM1 PF05602.12 RKO82971.1 - 0.033 13.2 0.1 0.042 12.9 0.1 1.2 1 0 0 1 1 1 0 Cleft lip and palate transmembrane protein 1 (CLPTM1) ATPase_2 PF01637.18 RKO82971.1 - 0.08 12.8 0.5 0.13 12.1 0.5 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea FeS_assembly_P PF01883.19 RKO82972.1 - 0.02 15.1 0.0 0.027 14.6 0.0 1.3 1 0 0 1 1 1 0 Iron-sulfur cluster assembly protein Orn_Arg_deC_N PF02784.16 RKO82973.1 - 4.4e-77 258.8 0.0 5.4e-77 258.5 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 RKO82973.1 - 2.8e-21 75.6 0.0 3.3e-21 75.3 0.0 1.5 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain B12-binding PF02310.19 RKO82973.1 - 0.013 15.5 0.0 0.027 14.5 0.0 1.5 1 0 0 1 1 1 0 B12 binding domain DUF3336 PF11815.8 RKO82974.1 - 4.7e-17 62.0 0.0 2.2e-14 53.4 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF3336) Patatin PF01734.22 RKO82974.1 - 1.8e-14 54.4 0.1 2.5e-14 53.9 0.1 1.2 1 0 0 1 1 1 1 Patatin-like phospholipase Phage_holin_5_1 PF06946.11 RKO82974.1 - 0.16 12.4 0.8 0.46 10.9 0.0 2.1 2 1 1 3 3 3 0 Bacteriophage A118-like holin, Hol118 Meckelin PF09773.9 RKO82975.1 - 1.2e-53 182.5 0.0 1.4e-53 182.2 0.0 1.0 1 0 0 1 1 1 1 Meckelin (Transmembrane protein 67) Trp_oprn_chp PF09534.10 RKO82978.1 - 0.044 13.6 2.8 0.12 12.1 1.3 2.0 2 0 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) TPR_21 PF09976.9 RKO82979.1 - 0.13 11.9 12.7 0.53 10.0 1.0 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat-like domain BAR_3_WASP_bdg PF10456.9 RKO82979.1 - 0.16 11.4 0.0 0.22 11.0 0.0 1.1 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein PSII_Pbs31 PF18240.1 RKO82979.1 - 0.19 12.2 9.3 0.076 13.5 5.3 2.0 1 1 1 2 2 2 0 Photosystem II Psb31 protein TPR_1 PF00515.28 RKO82980.1 - 8.2e-17 60.2 0.0 2.1e-07 30.5 0.1 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 RKO82980.1 - 2.3e-16 58.5 0.0 2.3e-06 27.3 0.1 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 RKO82980.1 - 2.4e-14 53.3 4.0 1.5e-05 25.2 0.1 3.6 2 1 2 4 4 4 4 Tetratricopeptide repeat TPR_8 PF13181.6 RKO82980.1 - 8.5e-13 47.4 0.0 0.0017 18.4 0.1 4.0 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 RKO82980.1 - 1.6e-09 37.1 1.3 0.0096 15.9 0.0 4.7 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_6 PF13174.6 RKO82980.1 - 1.3e-07 31.8 1.4 1 10.1 0.2 4.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 RKO82980.1 - 1.3e-07 31.6 5.0 0.0065 16.6 0.3 3.1 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 RKO82980.1 - 2.7e-07 30.5 0.0 0.0012 19.1 0.0 3.7 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO82980.1 - 4.1e-07 30.5 0.2 0.0014 19.3 0.0 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 RKO82980.1 - 4e-06 27.3 0.9 0.0048 17.4 0.0 3.1 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO82980.1 - 1.8e-05 25.1 0.5 0.85 10.6 0.0 3.6 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_10 PF13374.6 RKO82980.1 - 0.00014 21.6 4.0 2.4 8.2 0.0 4.8 4 1 0 4 4 4 1 Tetratricopeptide repeat TPR_MalT PF17874.1 RKO82980.1 - 0.0011 18.4 1.2 0.027 13.8 0.8 2.6 1 1 1 2 2 2 1 MalT-like TPR region TPR_11 PF13414.6 RKO82980.1 - 0.0056 16.3 0.0 0.98 9.2 0.0 2.9 2 1 1 3 3 3 2 TPR repeat TPR_4 PF07721.14 RKO82980.1 - 0.015 15.8 6.7 24 5.9 0.1 5.0 5 1 0 5 5 4 0 Tetratricopeptide repeat ANAPC5 PF12862.7 RKO82980.1 - 0.029 14.4 4.1 1.4 9.0 0.3 2.9 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 5 TPR_21 PF09976.9 RKO82980.1 - 0.096 12.4 0.1 0.66 9.7 0.0 2.1 1 1 0 2 2 2 0 Tetratricopeptide repeat-like domain Cyt-b5 PF00173.28 RKO82983.1 - 7.5e-11 42.0 0.0 8.6e-11 41.8 0.0 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Pescadillo_N PF06732.11 RKO82985.1 - 5.1e-110 367.3 0.1 7.4e-110 366.8 0.1 1.2 1 0 0 1 1 1 1 Pescadillo N-terminus BRCT_2 PF16589.5 RKO82985.1 - 1.7e-06 28.3 0.0 5.3e-06 26.8 0.0 1.9 2 0 0 2 2 2 1 BRCT domain, a BRCA1 C-terminus domain BRCT PF00533.26 RKO82985.1 - 0.00038 20.8 0.0 0.0013 19.1 0.0 2.0 1 1 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain CPSF100_C PF13299.6 RKO82985.1 - 1.7 8.8 4.8 0.67 10.1 0.2 2.1 2 0 0 2 2 2 0 Cleavage and polyadenylation factor 2 C-terminal Ketoacyl-synt_C PF02801.22 RKO82987.1 - 3.2e-38 130.4 0.4 4.2e-38 130.0 0.4 1.2 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain ketoacyl-synt PF00109.26 RKO82987.1 - 3.7e-08 33.3 0.1 4e-07 29.9 0.0 2.0 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Thiolase_C PF02803.18 RKO82987.1 - 0.0084 15.8 0.2 0.015 14.9 0.2 1.5 1 0 0 1 1 1 1 Thiolase, C-terminal domain KAsynt_C_assoc PF16197.5 RKO82987.1 - 0.067 13.6 0.0 0.25 11.8 0.0 2.0 2 0 0 2 2 2 0 Ketoacyl-synthetase C-terminal extension HUN PF08729.10 RKO82989.1 - 0.00022 21.1 1.2 0.00057 19.8 1.2 1.7 1 0 0 1 1 1 1 HPC2 and ubinuclein domain TPR_2 PF07719.17 RKO82990.1 - 3e-16 58.1 2.5 0.00015 21.6 0.0 5.5 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_19 PF14559.6 RKO82990.1 - 3.8e-13 49.7 4.2 1.5e-07 31.8 0.0 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO82990.1 - 4.4e-12 46.4 10.6 2.6e-06 28.0 0.1 3.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 RKO82990.1 - 6.5e-12 45.2 9.8 0.038 14.8 0.1 5.7 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_1 PF00515.28 RKO82990.1 - 2.7e-10 39.6 0.3 0.00011 21.9 0.0 4.8 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_9 PF13371.6 RKO82990.1 - 8e-08 32.3 1.2 0.0089 16.2 0.3 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 RKO82990.1 - 5.8e-07 29.1 0.6 0.028 14.1 0.0 3.3 3 0 0 3 3 3 2 TPR repeat TPR_8 PF13181.6 RKO82990.1 - 1.2e-06 28.2 3.3 0.2 11.9 0.0 5.6 6 1 1 7 7 7 2 Tetratricopeptide repeat TPR_15 PF13429.6 RKO82990.1 - 0.00011 21.5 4.9 0.09 12.0 0.0 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 RKO82990.1 - 0.00052 20.2 6.0 0.41 11.0 0.1 3.6 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_4 PF07721.14 RKO82990.1 - 0.0036 17.8 6.3 0.026 15.1 0.1 3.5 4 0 0 4 4 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 RKO82990.1 - 0.0094 15.9 1.6 2.1 8.5 0.0 4.6 5 1 0 5 5 5 1 Tetratricopeptide repeat TPR_10 PF13374.6 RKO82990.1 - 0.38 10.7 8.8 5.7 6.9 0.2 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat HemY_N PF07219.13 RKO82990.1 - 0.71 10.1 3.7 1.7 8.9 0.4 2.7 2 1 0 2 2 2 0 HemY protein N-terminus TPR_6 PF13174.6 RKO82990.1 - 1.9 9.3 10.4 1.7e+02 3.2 0.0 5.7 6 0 0 6 6 6 0 Tetratricopeptide repeat UBA_2 PF08587.11 RKO82992.1 - 0.044 13.9 2.4 0.28 11.3 1.1 2.5 2 0 0 2 2 2 0 Ubiquitin associated domain (UBA) Syntaxin-18_N PF10496.9 RKO82992.1 - 0.12 12.7 3.0 0.12 12.6 1.5 1.8 2 0 0 2 2 2 0 SNARE-complex protein Syntaxin-18 N-terminus Kelch_5 PF13854.6 RKO82994.1 - 2.9e-08 33.5 9.2 0.051 13.6 0.0 4.9 5 0 0 5 5 5 3 Kelch motif Kelch_6 PF13964.6 RKO82994.1 - 6e-08 32.7 17.0 9.5e-06 25.7 0.3 5.2 3 1 2 5 5 5 2 Kelch motif Kelch_4 PF13418.6 RKO82994.1 - 2.4e-06 27.4 0.1 2.4e-06 27.4 0.1 4.8 4 1 1 5 5 5 1 Galactose oxidase, central domain Kelch_3 PF13415.6 RKO82994.1 - 3.3e-06 27.2 15.2 0.0075 16.5 0.2 5.4 5 1 0 5 5 5 3 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO82994.1 - 1e-05 25.0 10.6 9.7e-05 21.9 0.1 4.9 5 0 0 5 5 5 1 Kelch motif SH3_1 PF00018.28 RKO82994.1 - 5e-05 22.8 0.0 8.4e-05 22.1 0.0 1.4 1 0 0 1 1 1 1 SH3 domain Kelch_2 PF07646.15 RKO82994.1 - 7.2e-05 22.6 6.4 0.0017 18.2 0.1 4.4 5 0 0 5 5 5 1 Kelch motif SH3_9 PF14604.6 RKO82994.1 - 0.00027 20.7 0.0 0.00058 19.7 0.0 1.6 1 0 0 1 1 1 1 Variant SH3 domain GRA6 PF05084.13 RKO82994.1 - 0.02 14.8 0.6 0.083 12.8 0.1 2.1 2 0 0 2 2 2 0 Granule antigen protein (GRA6) Phage_Coat_B PF05356.11 RKO82994.1 - 0.075 13.0 0.1 0.2 11.6 0.1 1.7 1 0 0 1 1 1 0 Phage Coat protein B TLD PF07534.16 RKO82995.1 - 7.8e-17 61.8 0.1 8.4e-17 61.7 0.1 1.0 1 0 0 1 1 1 1 TLD FragX_IP PF05994.11 RKO82996.1 - 1.2e-123 414.0 4.5 1.3e-123 413.9 4.5 1.0 1 0 0 1 1 1 1 Cytoplasmic Fragile-X interacting family Ipi1_N PF12333.8 RKO82997.1 - 0.15 12.7 0.3 3.9 8.1 0.0 2.3 1 1 1 2 2 2 0 Rix1 complex component involved in 60S ribosome maturation DLH PF01738.18 RKO82998.1 - 0.098 12.2 0.0 0.12 11.9 0.0 1.1 1 0 0 1 1 1 0 Dienelactone hydrolase family DUF1902 PF08972.11 RKO82999.1 - 0.12 12.4 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1902) tRNA_bind PF01588.20 RKO83000.1 - 5.6e-30 103.3 0.1 6.1e-30 103.2 0.1 1.0 1 0 0 1 1 1 1 Putative tRNA binding domain Viral_protease PF08715.10 RKO83000.1 - 0.018 14.4 0.0 0.019 14.3 0.0 1.1 1 0 0 1 1 1 0 Papain like viral protease RuBisCO_large_N PF02788.16 RKO83000.1 - 0.17 12.0 0.0 0.22 11.7 0.0 1.1 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase large chain, N-terminal domain AAA_21 PF13304.6 RKO83002.1 - 0.12 12.2 0.1 0.13 12.0 0.1 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system PCNA_C PF02747.15 RKO83004.1 - 8.4e-10 38.9 0.0 1e-09 38.6 0.0 1.1 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, C-terminal domain L_protein_N PF15518.6 RKO83004.1 - 0.00097 18.9 0.0 0.0015 18.3 0.0 1.3 1 0 0 1 1 1 1 L protein N-terminus Glyco_hydro_6 PF01341.17 RKO83007.1 - 8.1e-20 71.8 0.5 8.6e-20 71.7 0.5 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 6 Aa_trans PF01490.18 RKO83009.1 - 9.1e-22 77.3 1.8 2.4e-16 59.5 0.0 3.4 2 1 0 2 2 2 2 Transmembrane amino acid transporter protein CobT PF06213.12 RKO83010.1 - 0.006 16.0 11.4 0.006 16.0 11.4 3.2 2 1 1 3 3 3 1 Cobalamin biosynthesis protein CobT TINF2_N PF14973.6 RKO83010.1 - 1.4 9.2 5.9 0.71 10.2 2.2 2.2 1 1 1 2 2 2 0 TERF1-interacting nuclear factor 2 N-terminus Prominin PF05478.11 RKO83010.1 - 3.5 5.5 15.1 5.6 4.8 15.1 1.3 1 0 0 1 1 1 0 Prominin Histone PF00125.24 RKO83012.1 - 4e-09 36.9 0.0 4.5e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Histone_H2A_C PF16211.5 RKO83012.1 - 3.8e-08 32.9 0.4 5.9e-08 32.3 0.4 1.3 1 0 0 1 1 1 1 C-terminus of histone H2A Peptidase_C2 PF00648.21 RKO83013.1 - 8.8e-45 153.0 0.0 1.2e-44 152.5 0.0 1.1 1 0 0 1 1 1 1 Calpain family cysteine protease Phenol_monoox PF04663.12 RKO83013.1 - 0.097 12.8 0.1 3.6 7.8 0.1 2.4 2 0 0 2 2 2 0 Phenol hydroxylase conserved region E1-E2_ATPase PF00122.20 RKO83014.1 - 4.4e-15 55.7 0.5 4.4e-15 55.7 0.5 2.2 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 RKO83014.1 - 9.3e-06 25.2 0.6 6.2e-05 22.6 0.0 2.1 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus BaxI_1 PF12811.7 RKO83014.1 - 0.032 13.8 1.4 0.048 13.2 1.4 1.2 1 0 0 1 1 1 0 Bax inhibitor 1 like DUF1772 PF08592.11 RKO83014.1 - 0.086 13.2 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1772) Pkinase PF00069.25 RKO83016.1 - 4.4e-24 85.3 0.0 1e-22 80.8 0.0 2.0 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO83016.1 - 0.0014 18.0 0.0 0.002 17.5 0.0 1.5 1 1 0 1 1 1 1 Protein tyrosine kinase PB1 PF00564.24 RKO83018.1 - 0.00013 21.8 0.0 0.00021 21.2 0.0 1.3 1 0 0 1 1 1 1 PB1 domain PB1 PF00564.24 RKO83019.1 - 1.9e-08 34.1 0.0 2.7e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 PB1 domain adh_short PF00106.25 RKO83020.1 - 1.4e-30 106.2 0.3 1.6e-30 106.0 0.3 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO83020.1 - 1.9e-26 93.1 0.3 2.4e-26 92.7 0.3 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 RKO83020.1 - 1.5e-08 34.8 0.7 1.9e-08 34.4 0.7 1.2 1 0 0 1 1 1 1 KR domain AdoHcyase_NAD PF00670.21 RKO83020.1 - 0.012 15.7 0.3 0.015 15.4 0.3 1.4 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Enoyl_reductase PF12241.8 RKO83020.1 - 0.029 13.7 0.0 0.038 13.3 0.0 1.2 1 0 0 1 1 1 0 Trans-2-enoyl-CoA reductase catalytic region Glyco_trans_4_2 PF13477.6 RKO83020.1 - 0.03 14.4 0.0 0.038 14.0 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase 4-like THF_DHG_CYH_C PF02882.19 RKO83020.1 - 0.033 13.5 0.0 0.057 12.7 0.0 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CD34_antigen PF06365.12 RKO83020.1 - 0.04 13.5 0.0 0.051 13.2 0.0 1.1 1 0 0 1 1 1 0 CD34/Podocalyxin family DctM PF06808.12 RKO83021.1 - 0.22 10.3 0.7 0.22 10.3 0.7 1.2 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporter, DctM component Oxidored_FMN PF00724.20 RKO83022.1 - 9.1e-17 61.3 0.0 9.8e-17 61.2 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family Xan_ur_permease PF00860.20 RKO83023.1 - 1.3e-15 57.0 9.4 1.9e-15 56.4 9.4 1.2 1 0 0 1 1 1 1 Permease family Equine_IAV_S2 PF06502.11 RKO83024.1 - 0.06 13.4 0.0 1 9.5 0.0 2.3 2 0 0 2 2 2 0 Equine infectious anaemia virus S2 protein CRAL_TRIO PF00650.20 RKO83025.1 - 0.00016 21.5 0.0 0.00029 20.6 0.0 1.4 1 0 0 1 1 1 1 CRAL/TRIO domain Anti-TRAP PF15777.5 RKO83025.1 - 2.7 8.0 5.6 6.6 6.8 5.6 1.6 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein Seipin PF06775.14 RKO83026.1 - 2.7e-20 73.3 4.7 6e-12 46.1 0.1 2.1 1 1 1 2 2 2 2 Putative adipose-regulatory protein (Seipin) Glyco_hydro_28 PF00295.17 RKO83027.1 - 9.2e-40 136.7 7.7 1.2e-39 136.3 7.7 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 Beta_helix PF13229.6 RKO83027.1 - 0.0069 16.3 8.7 0.029 14.2 8.9 2.0 1 1 0 1 1 1 1 Right handed beta helix region DUF724 PF05266.14 RKO83029.1 - 0.0059 16.5 2.9 0.0059 16.5 2.9 3.7 1 1 3 4 4 4 1 Protein of unknown function (DUF724) Filament PF00038.21 RKO83029.1 - 0.0071 16.0 3.8 0.0071 16.0 3.8 3.8 1 1 1 2 2 2 1 Intermediate filament protein GOLGA2L5 PF15070.6 RKO83029.1 - 0.02 13.6 29.9 0.025 13.3 2.1 2.5 1 1 0 2 2 2 0 Putative golgin subfamily A member 2-like protein 5 YabA PF06156.13 RKO83029.1 - 0.17 12.5 21.1 10 6.8 0.3 5.7 2 1 3 5 5 5 0 Initiation control protein YabA Spc7 PF08317.11 RKO83029.1 - 0.81 8.5 36.3 0.29 10.0 9.3 3.2 1 1 3 4 4 4 0 Spc7 kinetochore protein Fib_alpha PF08702.10 RKO83029.1 - 1 9.5 7.1 48 4.1 0.2 3.5 3 0 0 3 3 3 0 Fibrinogen alpha/beta chain family DUF16 PF01519.16 RKO83029.1 - 1.6 9.3 8.3 0.71 10.4 0.1 3.5 2 1 0 2 2 2 0 Protein of unknown function DUF16 Baculo_PEP_C PF04513.12 RKO83029.1 - 2.9 7.9 15.2 6 6.9 2.9 3.9 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus JIP_LZII PF16471.5 RKO83029.1 - 3.2 8.0 19.2 7.8 6.8 0.2 5.6 4 1 1 5 5 5 0 JNK-interacting protein leucine zipper II DUF1664 PF07889.12 RKO83029.1 - 3.7 7.6 14.9 8.3 6.5 0.6 4.2 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) GIT_CC PF16559.5 RKO83029.1 - 4.2 7.3 11.6 35 4.3 0.5 5.0 5 0 0 5 5 5 0 GIT coiled-coil Rho guanine nucleotide exchange factor SKA1 PF07160.12 RKO83029.1 - 5.9 6.7 11.4 11 5.7 0.8 3.3 2 1 0 3 3 3 0 Spindle and kinetochore-associated protein 1 Rootletin PF15035.6 RKO83029.1 - 6.3 6.8 31.1 4.7 7.2 7.9 3.5 1 1 2 3 3 3 0 Ciliary rootlet component, centrosome cohesion Jnk-SapK_ap_N PF09744.9 RKO83029.1 - 6.9 6.9 37.7 0.095 12.9 7.5 4.4 2 2 2 4 4 4 0 JNK_SAPK-associated protein-1 AAA_13 PF13166.6 RKO83029.1 - 7.3 5.1 22.7 6.6 5.2 13.0 2.1 1 1 1 2 2 2 0 AAA domain DUF4763 PF15960.5 RKO83029.1 - 9.5 5.4 13.4 2.8 7.2 5.9 3.1 1 1 3 4 4 4 0 Domain of unknown function (DUF4763) HNH_2 PF13391.6 RKO83030.1 - 0.00023 21.2 0.1 0.00045 20.3 0.1 1.5 1 0 0 1 1 1 1 HNH endonuclease TPR_14 PF13428.6 RKO83030.1 - 0.071 14.0 0.8 0.22 12.4 0.2 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat PUL PF08324.11 RKO83030.1 - 0.15 11.2 0.0 0.26 10.5 0.0 1.3 1 0 0 1 1 1 0 PUL domain DUF1997 PF09366.10 RKO83034.1 - 0.1 12.7 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1997) Hydrolase_4 PF12146.8 RKO83036.1 - 3.9e-10 39.4 0.0 4.7e-10 39.2 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 RKO83036.1 - 8.2e-08 32.2 0.0 1e-07 31.9 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 RKO83036.1 - 1.8e-06 28.7 0.0 2.2e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S15 PF02129.18 RKO83036.1 - 0.00081 19.1 0.0 0.0011 18.7 0.0 1.1 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) DUF1749 PF08538.10 RKO83036.1 - 0.001 18.3 0.0 0.0013 17.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1749) DUF915 PF06028.11 RKO83036.1 - 0.13 11.6 0.0 0.17 11.2 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) DUF697 PF05128.12 RKO83037.1 - 0.098 12.4 0.2 0.16 11.7 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF697) Abhydrolase_1 PF00561.20 RKO83040.1 - 4.8e-06 26.4 0.0 8.3e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold HSP20 PF00011.21 RKO83041.1 - 2.2e-13 50.2 0.4 2.3e-13 50.1 0.4 1.0 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 RKO83041.1 - 0.00057 19.4 0.1 0.0013 18.2 0.1 1.7 1 1 0 1 1 1 1 HSP20-like domain found in ArsA NT-C2 PF10358.9 RKO83041.1 - 0.028 14.1 0.0 0.031 14.0 0.0 1.0 1 0 0 1 1 1 0 N-terminal C2 in EEIG1 and EHBP1 proteins MFS_1 PF07690.16 RKO83042.1 - 8e-30 104.0 29.3 9.7e-30 103.7 29.3 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Fzo_mitofusin PF04799.13 RKO83042.1 - 0.23 11.0 0.2 0.44 10.1 0.2 1.4 1 0 0 1 1 1 0 fzo-like conserved region Utp12 PF04003.12 RKO83043.1 - 6.2e-19 68.3 0.0 1e-18 67.6 0.0 1.4 1 0 0 1 1 1 1 Dip2/Utp12 Family Utp21 PF04192.12 RKO83043.1 - 0.003 17.1 0.1 0.0043 16.6 0.1 1.2 1 0 0 1 1 1 1 Utp21 specific WD40 associated putative domain UTP15_C PF09384.10 RKO83043.1 - 0.054 13.2 0.8 0.075 12.7 0.0 1.6 2 0 0 2 2 2 0 UTP15 C terminal Telomere_reg-2 PF10193.9 RKO83043.1 - 0.14 12.6 0.0 0.26 11.8 0.0 1.4 1 0 0 1 1 1 0 Telomere length regulation protein ANAPC4_WD40 PF12894.7 RKO83043.1 - 0.17 12.2 0.0 1.4 9.3 0.0 2.4 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 RKO83043.1 - 0.26 12.3 1.1 18 6.4 0.0 2.8 3 0 0 3 3 3 0 WD domain, G-beta repeat Bac_rhodopsin PF01036.18 RKO83045.1 - 3.8e-13 49.5 0.5 5.6e-13 49.0 0.2 1.3 1 1 0 1 1 1 1 Bacteriorhodopsin-like protein Flavodoxin_1 PF00258.25 RKO83046.1 - 1.9e-33 115.7 0.0 2.3e-33 115.4 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.7 RKO83046.1 - 1.7e-05 25.1 0.0 0.13 12.5 0.0 2.1 1 1 1 2 2 2 2 Flavodoxin domain Flavodoxin_3 PF12641.7 RKO83046.1 - 0.0075 16.0 0.0 0.009 15.7 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin domain ABC_tran PF00005.27 RKO83047.1 - 2.2e-26 93.0 0.0 3.4e-26 92.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 RKO83047.1 - 3.7e-05 23.3 0.1 0.002 17.6 0.0 2.1 1 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 RKO83047.1 - 0.00012 22.0 0.7 0.37 10.5 0.1 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 RKO83047.1 - 0.0018 17.9 0.2 1.1 8.8 0.0 2.3 2 0 0 2 2 2 2 AAA domain MMR_HSR1 PF01926.23 RKO83047.1 - 0.0046 17.0 0.1 0.0085 16.2 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_16 PF13191.6 RKO83047.1 - 0.0068 16.8 0.5 0.016 15.6 0.5 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 RKO83047.1 - 0.047 13.4 0.1 0.096 12.4 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.6 RKO83047.1 - 0.049 13.3 0.1 0.063 13.0 0.1 1.3 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 RKO83047.1 - 0.1 12.3 0.1 0.66 9.7 0.0 2.0 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF87 PF01935.17 RKO83047.1 - 0.11 12.6 0.4 0.21 11.7 0.4 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain NB-ARC PF00931.22 RKO83047.1 - 0.27 10.4 0.5 1.7 7.8 0.2 2.0 2 0 0 2 2 2 0 NB-ARC domain Methyltransf_33 PF10017.9 RKO83050.1 - 3.4e-62 210.4 0.0 4e-62 210.1 0.0 1.0 1 0 0 1 1 1 1 Histidine-specific methyltransferase, SAM-dependent Roughex PF06020.11 RKO83051.1 - 0.013 14.7 0.1 0.016 14.3 0.1 1.1 1 0 0 1 1 1 0 Drosophila roughex protein ATG16 PF08614.11 RKO83052.1 - 0.0029 17.9 9.1 0.0075 16.5 1.3 2.3 2 0 0 2 2 2 2 Autophagy protein 16 (ATG16) BAR_2 PF10455.9 RKO83052.1 - 0.024 13.8 0.4 0.034 13.3 0.4 1.2 1 0 0 1 1 1 0 Bin/amphiphysin/Rvs domain for vesicular trafficking Atg14 PF10186.9 RKO83052.1 - 0.036 13.2 0.0 0.043 12.9 0.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 YabA PF06156.13 RKO83052.1 - 0.23 12.1 2.6 0.51 11.0 1.7 2.0 2 1 0 2 2 2 0 Initiation control protein YabA Mod_r PF07200.13 RKO83052.1 - 0.32 11.1 3.5 0.15 12.2 1.3 1.6 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein CENP-H PF05837.12 RKO83052.1 - 0.92 9.9 5.3 0.45 10.9 2.8 1.9 2 1 0 2 2 2 0 Centromere protein H (CENP-H) SlyX PF04102.12 RKO83052.1 - 1.4 9.6 4.9 3.1 8.5 1.8 3.0 2 1 0 2 2 2 0 SlyX DUF4164 PF13747.6 RKO83052.1 - 2.6 8.4 11.6 2.3 8.5 5.8 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) Cep57_CLD_2 PF14197.6 RKO83052.1 - 4.5 7.4 9.3 2.7 8.2 4.6 2.6 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 WD40 PF00400.32 RKO83053.1 - 9.5e-50 165.5 9.7 1.5e-10 41.4 0.1 6.0 6 0 0 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO83053.1 - 4.9e-12 46.0 0.0 0.00055 20.2 0.0 4.2 1 1 3 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 RKO83053.1 - 6.1e-06 25.8 0.0 0.15 11.4 0.0 4.1 3 1 2 5 5 5 2 WD40-like domain Ge1_WD40 PF16529.5 RKO83053.1 - 2e-05 23.8 0.0 1 8.3 0.0 3.4 2 1 1 3 3 3 3 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 RKO83053.1 - 2.5e-05 23.1 0.0 0.24 10.0 0.0 3.2 3 0 0 3 3 3 2 Nucleoporin Nup120/160 eIF2A PF08662.11 RKO83053.1 - 0.0013 18.6 0.0 0.36 10.7 0.0 2.5 1 1 0 2 2 2 2 Eukaryotic translation initiation factor eIF2A DUF4748 PF15932.5 RKO83054.1 - 0.0032 17.2 0.0 0.0053 16.5 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4748) DUF2919 PF11143.8 RKO83055.1 - 0.081 13.3 1.1 0.13 12.6 1.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2919) DUF5357 PF17310.2 RKO83055.1 - 1.1 7.7 2.9 1.3 7.5 0.4 1.8 1 1 1 2 2 2 0 Family of unknown function (DUF5357) Piwi PF02171.17 RKO83056.1 - 1.4e-38 132.9 0.1 4.4e-23 82.0 0.1 3.1 1 1 2 3 3 3 3 Piwi domain ArgoL2 PF16488.5 RKO83056.1 - 3.7e-11 43.2 0.0 7.2e-11 42.2 0.0 1.5 1 0 0 1 1 1 1 Argonaute linker 2 domain ArgoMid PF16487.5 RKO83056.1 - 0.02 15.2 0.1 0.047 14.0 0.1 1.6 1 0 0 1 1 1 0 Mid domain of argonaute SURF4 PF02077.15 RKO83057.1 - 1.5e-66 224.8 5.3 1.7e-66 224.6 5.3 1.0 1 0 0 1 1 1 1 SURF4 family NMN_transporter PF04973.12 RKO83057.1 - 0.01 15.8 11.3 0.015 15.3 10.6 1.6 1 1 0 1 1 1 0 Nicotinamide mononucleotide transporter MLANA PF14991.6 RKO83057.1 - 0.23 11.8 0.1 0.54 10.6 0.1 1.7 1 0 0 1 1 1 0 Protein melan-A HEV_ORF1 PF02444.16 RKO83059.1 - 8.2 7.0 9.8 0.58 10.7 3.2 2.4 2 1 0 2 2 2 0 Hepatitis E virus ORF-2 (Putative capsid protein) Kelch_6 PF13964.6 RKO83060.1 - 9e-10 38.5 1.1 9.9e-05 22.5 0.1 3.4 3 1 0 3 3 3 2 Kelch motif Kelch_1 PF01344.25 RKO83060.1 - 3.2e-09 36.2 0.8 0.00079 19.0 0.0 3.7 4 0 0 4 4 4 2 Kelch motif Kelch_3 PF13415.6 RKO83060.1 - 0.0015 18.8 3.8 0.1 12.9 0.2 2.9 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_4 PF13418.6 RKO83060.1 - 0.0023 17.9 2.9 0.16 12.0 0.1 3.1 3 1 0 3 3 3 2 Galactose oxidase, central domain Kelch_2 PF07646.15 RKO83060.1 - 0.026 14.5 0.6 25 5.0 0.1 3.6 3 1 0 3 3 3 0 Kelch motif DUF1668 PF07893.13 RKO83060.1 - 0.042 13.2 0.2 0.043 13.2 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1668) Kinesin_assoc PF16183.5 RKO83062.1 - 0.00065 19.9 0.9 0.00065 19.9 0.9 2.4 2 1 0 2 2 2 1 Kinesin-associated Kinesin PF00225.23 RKO83062.1 - 0.0082 15.1 0.0 0.019 13.9 0.0 1.6 1 0 0 1 1 1 1 Kinesin motor domain Acyl-CoA_ox_N PF14749.6 RKO83062.1 - 0.074 13.6 6.4 0.23 12.0 6.4 1.8 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal Baculo_PEP_C PF04513.12 RKO83062.1 - 2.9 7.9 4.1 25 4.9 0.2 2.6 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Macoilin PF09726.9 RKO83062.1 - 4.1 5.9 23.6 17 3.8 23.6 1.7 1 1 0 1 1 1 0 Macoilin family FPP PF05911.11 RKO83062.1 - 7.4 4.6 30.3 3.4 5.7 5.1 2.4 1 1 1 2 2 2 0 Filament-like plant protein, long coiled-coil zf-LYAR PF08790.11 RKO83063.1 - 1.6e-15 56.6 2.0 1.6e-15 56.6 2.0 2.1 2 0 0 2 2 2 1 LYAR-type C2HC zinc finger zf_UBZ PF18439.1 RKO83063.1 - 0.00026 20.5 0.4 0.065 12.8 0.1 2.3 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger zf-TRAF PF02176.18 RKO83063.1 - 0.0031 18.2 3.2 0.0044 17.7 3.2 1.3 1 0 0 1 1 1 1 TRAF-type zinc finger zf-C2H2_jaz PF12171.8 RKO83063.1 - 0.15 12.4 4.9 5.8 7.3 0.1 2.7 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2_4 PF13894.6 RKO83063.1 - 0.32 12.0 5.6 4.2 8.5 0.8 2.5 2 1 0 2 2 2 0 C2H2-type zinc finger zf_C2H2_ZHX PF18387.1 RKO83063.1 - 2.7 7.7 8.6 2.6 7.7 1.7 2.4 1 1 1 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain zf-C2H2 PF00096.26 RKO83063.1 - 3.5 8.3 7.6 9.8 6.9 0.4 2.7 3 0 0 3 3 3 0 Zinc finger, C2H2 type IQ PF00612.27 RKO83064.1 - 0.022 14.5 1.8 0.048 13.5 1.8 1.6 1 0 0 1 1 1 0 IQ calmodulin-binding motif NQRA PF05896.11 RKO83064.1 - 0.089 12.2 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) IBR PF01485.21 RKO83066.1 - 1.5e-06 28.3 11.1 0.00026 21.1 1.3 3.1 3 0 0 3 3 3 2 IBR domain, a half RING-finger domain LRR_6 PF13516.6 RKO83068.1 - 8.6e-06 25.4 0.6 2.2 8.5 0.0 5.7 6 0 0 6 6 6 1 Leucine Rich repeat F-box-like PF12937.7 RKO83068.1 - 6.9e-05 22.7 2.0 0.00013 21.8 0.2 2.4 2 0 0 2 2 2 1 F-box-like T2SSF PF00482.23 RKO83069.1 - 0.0087 16.0 3.1 0.55 10.2 0.3 2.4 2 0 0 2 2 2 2 Type II secretion system (T2SS), protein F DUF5388 PF17363.2 RKO83069.1 - 0.067 13.4 0.5 0.23 11.7 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5388) DUF3450 PF11932.8 RKO83069.1 - 0.089 12.1 4.6 1.6 8.0 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) SPATA1_C PF15743.5 RKO83069.1 - 0.42 10.7 8.0 0.57 10.2 0.1 3.0 3 0 0 3 3 3 0 Spermatogenesis-associated C-terminus DUF883 PF05957.13 RKO83069.1 - 1.1 9.9 13.6 0.42 11.2 0.4 3.0 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF883) APG6_N PF17675.1 RKO83069.1 - 1.9 9.0 7.4 0.31 11.6 3.1 1.9 2 1 0 2 2 2 0 Apg6 coiled-coil region CdvA PF18822.1 RKO83069.1 - 2.7 7.8 6.3 6.1 6.7 0.4 3.1 2 1 0 3 3 3 0 CdvA-like coiled-coil domain E1_DerP2_DerF2 PF02221.15 RKO83070.1 - 0.0037 17.7 0.0 0.0061 17.0 0.0 1.2 1 0 0 1 1 1 1 ML domain ParA PF10609.9 RKO83073.1 - 6.5e-47 160.1 0.0 7.1e-47 159.9 0.0 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase PcrB PF01884.17 RKO83073.1 - 0.012 15.1 0.0 0.014 14.9 0.0 1.1 1 0 0 1 1 1 0 PcrB family Anti-TRAP PF15777.5 RKO83073.1 - 0.055 13.4 0.1 0.079 12.9 0.1 1.3 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein Zn_Tnp_IS1595 PF12760.7 RKO83073.1 - 0.15 12.1 0.1 0.36 10.8 0.1 1.6 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DUF1272 PF06906.11 RKO83073.1 - 0.17 12.0 0.7 0.46 10.6 0.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) PTR2 PF00854.21 RKO83075.1 - 1.7e-24 86.4 1.4 3.8e-24 85.3 1.1 1.6 2 0 0 2 2 2 1 POT family AMP-binding PF00501.28 RKO83076.1 - 2.1e-52 178.2 0.1 1.1e-35 123.0 0.0 2.1 1 1 1 2 2 2 2 AMP-binding enzyme ENTH PF01417.20 RKO83079.1 - 4.7e-45 152.7 0.0 5.9e-45 152.3 0.0 1.1 1 0 0 1 1 1 1 ENTH domain DEAD PF00270.29 RKO83080.1 - 6.6e-06 26.0 0.2 1.2e-05 25.1 0.2 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase THEG4 PF15834.5 RKO83080.1 - 3.6 7.5 6.6 1 9.3 1.3 2.3 1 1 1 2 2 2 0 Testis highly expressed protein 4 YjbE PF11106.8 RKO83080.1 - 4.9 7.4 7.1 0.66 10.2 1.0 2.4 2 0 0 2 2 2 0 Exopolysaccharide production protein YjbE SURF6 PF04935.12 RKO83083.1 - 1.8e-31 109.5 63.5 1.1e-28 100.4 63.5 3.0 1 1 0 1 1 1 1 Surfeit locus protein 6 RRP14 PF15459.6 RKO83083.1 - 1.2e-19 70.7 5.0 1.2e-19 70.7 5.0 5.1 3 2 2 5 5 5 1 60S ribosome biogenesis protein Rrp14 Lentiviral_Tat PF02998.14 RKO83083.1 - 0.55 10.3 6.9 0.096 12.7 0.7 2.5 3 0 0 3 3 3 0 Lentiviral Tat protein TIMELESS PF04821.14 RKO83087.1 - 2e-10 40.4 0.1 3.4e-09 36.4 0.0 2.3 2 0 0 2 2 2 2 Timeless protein Cnd1_N PF12922.7 RKO83089.1 - 6.7e-29 100.9 2.7 6.7e-29 100.9 2.7 2.2 2 0 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1, N-term HEAT PF02985.22 RKO83089.1 - 9.6e-05 22.3 1.0 4.8 7.7 0.0 4.9 5 0 0 5 5 5 2 HEAT repeat Barstar PF01337.18 RKO83089.1 - 0.048 13.7 0.1 0.3 11.1 0.0 2.4 2 0 0 2 2 2 0 Barstar (barnase inhibitor) DUF4042 PF13251.6 RKO83089.1 - 0.053 13.2 0.0 0.14 11.8 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4042) Cnd1 PF12717.7 RKO83089.1 - 0.18 11.9 4.2 7.4 6.6 0.0 3.5 3 1 1 4 4 4 0 non-SMC mitotic condensation complex subunit 1 TPR_MalT PF17874.1 RKO83094.1 - 0.002 17.6 0.2 0.34 10.2 0.2 2.4 1 1 1 2 2 2 2 MalT-like TPR region TPR_12 PF13424.6 RKO83094.1 - 0.0044 17.3 1.1 0.021 15.1 0.3 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO83094.1 - 0.011 16.4 6.3 0.43 11.3 0.1 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO83094.1 - 0.011 16.4 2.4 0.17 12.7 0.5 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 RKO83094.1 - 0.015 15.3 1.1 3 8.1 0.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 RKO83094.1 - 0.087 13.0 1.6 9.1 6.7 0.1 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_4 PF07721.14 RKO83094.1 - 0.11 13.2 1.1 0.11 13.2 1.1 2.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 RKO83094.1 - 0.14 12.0 2.1 0.3 11.0 1.2 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 RKO83094.1 - 1.1 9.0 2.9 1.8 8.3 0.3 2.1 2 0 0 2 2 2 0 TPR repeat Beta-lactamase PF00144.24 RKO83095.1 - 1.5e-44 152.6 0.2 2.3e-44 152.0 0.2 1.2 1 0 0 1 1 1 1 Beta-lactamase Ferlin_C PF16165.5 RKO83095.1 - 0.18 11.7 0.3 0.31 11.0 0.3 1.3 1 0 0 1 1 1 0 Ferlin C-terminus NETI PF14044.6 RKO83096.1 - 0.059 13.1 0.0 4.7 7.0 0.0 2.4 2 0 0 2 2 2 0 NETI protein VWA PF00092.28 RKO83097.1 - 1.4e-08 35.1 0.0 2.7e-08 34.3 0.0 1.4 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 RKO83097.1 - 3.1e-08 34.2 0.0 5.4e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain zf-C2H2_4 PF13894.6 RKO83098.1 - 1.8e-08 34.5 17.5 0.0095 16.7 0.8 4.5 4 0 0 4 4 4 4 C2H2-type zinc finger zf-C2H2 PF00096.26 RKO83098.1 - 1.7e-07 31.3 21.5 0.036 14.5 1.4 4.4 4 0 0 4 4 4 4 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 RKO83098.1 - 4.5e-05 23.3 14.5 0.078 13.0 0.3 4.3 4 0 0 4 4 4 2 C2H2-type zinc finger zf-C2H2_aberr PF17017.5 RKO83098.1 - 0.0025 18.0 12.1 0.3 11.2 0.4 3.5 2 1 2 4 4 4 2 Aberrant zinc-finger FOXP-CC PF16159.5 RKO83098.1 - 0.0099 16.5 3.8 6.9 7.4 0.0 3.7 3 1 1 4 4 4 2 FOXP coiled-coil domain SDA1 PF05285.12 RKO83098.1 - 0.019 14.4 14.2 0.031 13.7 14.2 1.3 1 0 0 1 1 1 0 SDA1 BUD22 PF09073.10 RKO83098.1 - 0.029 13.7 19.9 0.064 12.6 19.9 1.5 1 0 0 1 1 1 0 BUD22 zf_Hakai PF18408.1 RKO83098.1 - 0.048 13.4 0.5 0.048 13.4 0.5 3.6 4 0 0 4 4 4 0 C2H2 Hakai zinc finger domain zf-C2H2_11 PF16622.5 RKO83098.1 - 0.052 13.3 0.3 0.052 13.3 0.3 3.5 4 0 0 4 4 4 0 zinc-finger C2H2-type zf-C2HE PF16278.5 RKO83098.1 - 0.055 13.9 1.0 0.17 12.4 0.6 2.0 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2_8 PF15909.5 RKO83098.1 - 0.38 11.1 6.6 2.9 8.2 0.3 3.1 2 1 0 3 3 3 0 C2H2-type zinc ribbon zf-BED PF02892.15 RKO83098.1 - 0.86 9.7 8.2 14 5.8 0.6 3.4 3 0 0 3 3 3 0 BED zinc finger Sen15 PF09631.10 RKO83099.1 - 3.2e-17 62.6 0.1 1e-16 61.1 0.1 1.8 1 1 0 1 1 1 1 Sen15 protein Ribosomal_L1 PF00687.21 RKO83100.1 - 3.4e-15 56.3 0.0 3.8e-15 56.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family SIR2 PF02146.17 RKO83101.1 - 5.7e-27 94.8 0.0 1.8e-12 47.5 0.0 2.1 1 1 1 2 2 2 2 Sir2 family Dpoe2NT PF12213.8 RKO83104.1 - 0.11 12.9 1.2 0.16 12.3 0.2 1.8 2 0 0 2 2 2 0 DNA polymerases epsilon N terminal DUF3759 PF12585.8 RKO83105.1 - 2.5 8.2 9.7 0.28 11.2 1.4 3.0 1 1 0 2 2 2 0 Protein of unknown function (DUF3759) ABC_tran PF00005.27 RKO83107.1 - 2.2e-12 47.7 0.0 3.2e-12 47.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC2_membrane PF01061.24 RKO83107.1 - 1e-06 28.3 0.4 1.5e-06 27.7 0.4 1.2 1 0 0 1 1 1 1 ABC-2 type transporter Ery_res_leader1 PF08051.11 RKO83107.1 - 0.11 12.6 1.6 2.7 8.4 0.1 2.9 2 0 0 2 2 2 0 Erythromycin resistance leader peptide AAA_13 PF13166.6 RKO83107.1 - 0.11 11.1 0.0 0.17 10.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain XRN_N PF03159.18 RKO83108.1 - 2.8e-17 63.0 0.0 5.8e-10 39.0 0.0 2.1 1 1 1 2 2 2 2 XRN 5'-3' exonuclease N-terminus HEAT PF02985.22 RKO83110.1 - 0.03 14.6 0.1 9.1 6.8 0.0 3.5 3 0 0 3 3 3 0 HEAT repeat TFIIB PF00382.19 RKO83111.1 - 3.7e-38 129.4 3.7 1.7e-23 82.4 2.5 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat RB_B PF01857.20 RKO83111.1 - 0.00013 22.0 0.6 0.00023 21.2 0.6 1.5 1 0 0 1 1 1 1 Retinoblastoma-associated protein B domain Cyclin_N PF00134.23 RKO83111.1 - 0.00023 20.9 1.0 0.00075 19.3 0.6 1.8 1 1 1 2 2 2 1 Cyclin, N-terminal domain HTH_36 PF13730.6 RKO83111.1 - 0.00039 20.3 1.3 0.93 9.5 0.1 3.3 3 0 0 3 3 3 2 Helix-turn-helix domain UNC45-central PF11701.8 RKO83111.1 - 0.0053 16.7 1.3 0.015 15.2 0.7 1.8 1 1 1 2 2 2 1 Myosin-binding striated muscle assembly central TF_Zn_Ribbon PF08271.12 RKO83111.1 - 0.0089 15.5 0.0 0.015 14.8 0.0 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding HTH_Tnp_ISL3 PF13542.6 RKO83111.1 - 0.0095 15.3 0.0 1.3 8.5 0.0 2.8 2 1 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 HTH_AsnC-type PF13404.6 RKO83111.1 - 0.035 13.9 0.0 6.1 6.8 0.0 2.6 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain Peptidase_M15_3 PF08291.11 RKO83111.1 - 0.07 13.2 0.1 2.3 8.4 0.1 2.7 2 1 0 2 2 2 0 Peptidase M15 Cyclin_C PF02984.19 RKO83111.1 - 0.11 12.5 0.7 0.35 11.0 0.3 2.0 2 0 0 2 2 2 0 Cyclin, C-terminal domain DUF4134 PF13572.6 RKO83111.1 - 0.14 12.5 0.1 0.4 11.0 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4134) DUF2443 PF10398.9 RKO83111.1 - 0.14 12.2 0.0 0.33 11.0 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2443) Glycos_transf_3 PF00591.21 RKO83112.1 - 5.8e-18 65.4 0.0 6.4e-18 65.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Helicase_C PF00271.31 RKO83115.1 - 0.011 16.1 0.0 0.029 14.7 0.0 1.6 1 0 0 1 1 1 0 Helicase conserved C-terminal domain Sm_multidrug_ex PF06695.11 RKO83116.1 - 0.008 16.8 0.0 0.0085 16.7 0.0 1.1 1 0 0 1 1 1 1 Putative small multi-drug export protein Herpes_DNAp_acc PF04929.12 RKO83117.1 - 9.4 5.1 12.9 12 4.8 12.9 1.1 1 0 0 1 1 1 0 Herpes DNA replication accessory factor LIP PF03583.14 RKO83119.1 - 0.14 11.5 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 Secretory lipase 4HBT_3 PF13622.6 RKO83120.1 - 3.8e-26 92.9 0.8 4.4e-26 92.6 0.8 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily SDA1 PF05285.12 RKO83121.1 - 0.64 9.4 4.1 0.79 9.1 4.1 1.1 1 0 0 1 1 1 0 SDA1 Nop14 PF04147.12 RKO83121.1 - 1.1 7.4 4.1 1.2 7.2 4.1 1.1 1 0 0 1 1 1 0 Nop14-like family Peptidase_M14 PF00246.24 RKO83122.1 - 5e-41 141.4 0.1 5.7e-41 141.2 0.1 1.0 1 0 0 1 1 1 1 Zinc carboxypeptidase PAF-AH_p_II PF03403.13 RKO83123.1 - 0.18 10.3 0.0 0.23 9.9 0.0 1.1 1 0 0 1 1 1 0 Platelet-activating factor acetylhydrolase, isoform II zf-UBP_var PF17807.1 RKO83125.1 - 3.9e-10 39.3 0.4 6.5e-10 38.6 0.4 1.4 1 0 0 1 1 1 1 Variant UBP zinc finger zf-UBP PF02148.19 RKO83125.1 - 1.3e-06 28.6 0.7 1.3e-06 28.6 0.7 1.7 2 0 0 2 2 2 1 Zn-finger in ubiquitin-hydrolases and other protein HAD_2 PF13419.6 RKO83126.1 - 3.1e-14 53.4 0.0 3.6e-14 53.3 0.0 1.0 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 RKO83126.1 - 1.8e-08 35.0 0.0 2e-08 34.8 0.0 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase gag_pre-integrs PF13976.6 RKO83127.1 - 5.9e-06 26.0 0.2 1.6e-05 24.7 0.2 1.7 1 0 0 1 1 1 1 GAG-pre-integrase domain ActA PF05058.12 RKO83127.1 - 0.13 10.6 0.3 0.23 9.8 0.3 1.3 1 0 0 1 1 1 0 ActA Protein DUF1151 PF06625.11 RKO83127.1 - 0.71 9.8 2.2 1.3 9.0 2.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1151) Shadoo PF14999.6 RKO83128.1 - 0.11 12.6 3.7 0.29 11.2 3.7 1.6 1 0 0 1 1 1 0 Shadow of prion protein, neuroprotective TPR_9 PF13371.6 RKO83128.1 - 6.6 7.0 8.6 2.2 8.5 0.5 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO83128.1 - 8.1 7.6 9.7 8 7.6 0.9 4.3 4 1 0 4 4 4 0 Tetratricopeptide repeat zinc_ribbon_16 PF17034.5 RKO83131.1 - 2.1e-24 86.1 10.3 4.6e-24 85.0 10.3 1.6 1 1 0 1 1 1 1 Zinc-ribbon like family Zn_ribbon_17 PF17120.5 RKO83131.1 - 0.018 14.7 9.3 0.018 14.7 9.3 3.1 3 1 1 4 4 4 0 Zinc-ribbon, C4HC2 type PRMT5 PF05185.16 RKO83135.1 - 0.16 11.8 0.0 0.43 10.4 0.0 1.7 2 0 0 2 2 2 0 PRMT5 arginine-N-methyltransferase TCR PF03638.15 RKO83138.1 - 0.089 13.1 13.4 0.11 12.9 11.9 1.9 1 1 0 1 1 1 0 Tesmin/TSO1-like CXC domain, cysteine-rich domain Kelch_5 PF13854.6 RKO83139.1 - 4.8e-14 52.0 5.8 0.062 13.3 0.0 5.4 5 0 0 5 5 5 4 Kelch motif Kelch_6 PF13964.6 RKO83139.1 - 1.3e-13 50.7 7.7 0.0031 17.8 0.2 4.8 4 1 0 4 4 4 3 Kelch motif Kelch_4 PF13418.6 RKO83139.1 - 7.3e-13 48.3 15.9 4.3e-08 33.0 0.1 5.2 3 1 2 5 5 5 3 Galactose oxidase, central domain Kelch_3 PF13415.6 RKO83139.1 - 4e-10 39.7 21.6 0.0002 21.6 0.1 5.7 5 2 0 5 5 5 3 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO83139.1 - 2.9e-09 36.4 1.1 0.0046 16.5 0.0 4.2 4 0 0 4 4 4 3 Kelch motif Kelch_2 PF07646.15 RKO83139.1 - 1.2e-07 31.5 4.2 0.12 12.4 0.0 5.2 5 0 0 5 5 5 3 Kelch motif Hexapep PF00132.24 RKO83140.1 - 0.00096 18.8 6.3 0.028 14.2 0.1 3.4 4 0 0 4 4 4 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 RKO83140.1 - 0.049 13.4 4.3 0.62 9.9 0.0 3.1 3 0 0 3 3 3 0 Hexapeptide repeat of succinyl-transferase Ank_2 PF12796.7 RKO83141.1 - 5.4e-05 23.7 0.0 0.69 10.5 0.0 4.0 2 1 3 5 5 5 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO83141.1 - 0.0047 17.3 1.0 25 5.9 0.0 4.7 5 0 0 5 5 5 1 Ankyrin repeat Ank_4 PF13637.6 RKO83141.1 - 0.0077 16.8 0.1 20 5.9 0.0 4.1 5 0 0 5 5 5 2 Ankyrin repeats (many copies) SH3_9 PF14604.6 RKO83143.1 - 2.2e-06 27.4 0.0 3e-05 23.8 0.0 2.2 2 0 0 2 2 2 1 Variant SH3 domain SH3_1 PF00018.28 RKO83143.1 - 0.0048 16.5 0.0 0.0072 15.9 0.0 1.3 1 0 0 1 1 1 1 SH3 domain PhoR PF11808.8 RKO83143.1 - 0.088 13.2 0.0 0.15 12.5 0.0 1.3 1 0 0 1 1 1 0 Phosphate regulon sensor protein PhoR Gly-zipper_Omp PF13488.6 RKO83143.1 - 0.11 12.5 0.9 0.21 11.6 0.9 1.4 1 0 0 1 1 1 0 Glycine zipper PRKG1_interact PF15898.5 RKO83147.1 - 0.12 13.2 1.1 0.27 12.1 0.5 1.9 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain DHR10 PF18595.1 RKO83147.1 - 2.1 8.4 5.9 1.5 8.9 3.3 1.9 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain PDDEXK_2 PF12784.7 RKO83148.1 - 3e-15 56.4 0.0 3.4e-10 39.9 0.0 3.1 3 0 0 3 3 3 3 PD-(D/E)XK nuclease family transposase Kinesin PF00225.23 RKO83150.1 - 5.5e-18 65.0 1.0 4.3e-17 62.0 0.0 2.1 2 0 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 RKO83150.1 - 8.9e-11 41.9 0.0 1.6e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Microtubule binding Stathmin PF00836.19 RKO83150.1 - 0.2 11.7 2.2 0.39 10.7 2.2 1.5 1 0 0 1 1 1 0 Stathmin family Melittin PF01372.17 RKO83154.1 - 0.034 14.1 0.5 0.091 12.7 0.2 1.9 2 0 0 2 2 2 0 Melittin LMWPc PF01451.21 RKO83157.1 - 5.6e-48 162.9 0.0 6.2e-48 162.8 0.0 1.0 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase Sel1 PF08238.12 RKO83158.1 - 1.5e-29 101.7 10.0 0.00015 22.3 1.7 6.6 6 1 0 6 6 6 5 Sel1 repeat TPR_6 PF13174.6 RKO83158.1 - 0.2 12.4 5.2 3.1 8.6 0.3 4.5 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO83158.1 - 0.46 11.2 19.0 3.4 8.4 2.5 4.4 5 1 1 6 6 6 0 Tetratricopeptide repeat ABC_tran PF00005.27 RKO83159.1 - 1.6e-26 93.5 0.0 2.5e-26 92.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter Pox_A32 PF04665.12 RKO83159.1 - 0.0019 17.7 0.1 0.0035 16.8 0.1 1.4 1 0 0 1 1 1 1 Poxvirus A32 protein AAA_29 PF13555.6 RKO83159.1 - 0.003 17.3 0.0 0.0057 16.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain NACHT PF05729.12 RKO83159.1 - 0.0073 16.2 0.1 0.059 13.3 0.0 2.0 2 0 0 2 2 2 1 NACHT domain MobB PF03205.14 RKO83159.1 - 0.0074 16.2 0.0 0.014 15.3 0.0 1.4 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.19 RKO83159.1 - 0.0098 15.5 0.6 0.067 12.8 0.1 2.0 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 RKO83159.1 - 0.012 15.8 0.2 0.075 13.2 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 RKO83159.1 - 0.017 15.5 0.0 0.035 14.5 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 RKO83159.1 - 0.021 14.9 0.1 0.059 13.5 0.0 1.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_25 PF13481.6 RKO83159.1 - 0.023 14.3 0.0 0.051 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 RKO83159.1 - 0.031 13.9 0.0 0.036 13.7 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_22 PF13401.6 RKO83159.1 - 0.033 14.5 0.0 0.058 13.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 RKO83159.1 - 0.061 13.0 0.1 0.2 11.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 RKO83159.1 - 0.063 13.0 0.0 0.097 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 RKO83159.1 - 0.07 12.5 0.1 0.13 11.6 0.1 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family NB-ARC PF00931.22 RKO83159.1 - 0.07 12.3 0.4 0.25 10.5 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain DUF87 PF01935.17 RKO83159.1 - 0.08 13.0 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain CbiA PF01656.23 RKO83159.1 - 0.087 12.9 0.2 0.25 11.4 0.1 1.7 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain RsgA_GTPase PF03193.16 RKO83159.1 - 0.091 12.7 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase SMC_N PF02463.19 RKO83159.1 - 0.093 12.2 1.3 3.1 7.2 0.1 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain DNA_primase_S PF01896.19 RKO83159.1 - 0.094 12.7 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 DNA primase small subunit Roc PF08477.13 RKO83159.1 - 0.11 12.8 0.1 0.24 11.6 0.0 1.6 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_21 PF13304.6 RKO83159.1 - 0.13 12.0 0.2 0.25 11.1 0.1 1.6 1 1 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system T2SSE PF00437.20 RKO83159.1 - 0.14 11.2 0.1 0.27 10.3 0.1 1.5 1 1 0 1 1 1 0 Type II/IV secretion system protein ABC_ATPase PF09818.9 RKO83159.1 - 0.14 11.0 0.3 6.1 5.5 0.0 2.2 2 0 0 2 2 2 0 Predicted ATPase of the ABC class TrwB_AAD_bind PF10412.9 RKO83159.1 - 0.18 10.7 0.0 0.27 10.1 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_23 PF13476.6 RKO83159.1 - 0.2 12.1 0.1 0.33 11.4 0.1 1.2 1 0 0 1 1 1 0 AAA domain Abhydrolase_1 PF00561.20 RKO83160.1 - 4.6e-17 62.5 0.1 5.3e-17 62.3 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold zf-MYND PF01753.18 RKO83163.1 - 1.8e-11 44.0 8.8 1.8e-11 44.0 8.8 2.1 2 0 0 2 2 2 1 MYND finger zf-C6H2 PF15801.5 RKO83163.1 - 0.054 13.8 5.1 0.054 13.8 5.1 2.2 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding zf-MYND PF01753.18 RKO83164.1 - 1.8e-11 44.0 8.8 1.8e-11 44.0 8.8 2.1 2 0 0 2 2 2 1 MYND finger zf-C6H2 PF15801.5 RKO83164.1 - 0.054 13.8 5.1 0.054 13.8 5.1 2.2 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding Ras PF00071.22 RKO83165.1 - 9.2e-47 158.6 0.0 1.1e-46 158.4 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO83165.1 - 8e-25 87.4 0.0 1.1e-24 87.0 0.0 1.1 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO83165.1 - 3.4e-10 39.6 0.0 4.3e-10 39.3 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 RKO83165.1 - 0.028 13.9 0.0 0.036 13.6 0.0 1.2 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 RKO83165.1 - 0.19 11.1 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region Kelch_4 PF13418.6 RKO83166.1 - 1.4e-06 28.2 0.0 0.055 13.5 0.0 2.4 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO83166.1 - 3e-05 23.9 0.0 0.11 12.5 0.0 2.6 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 RKO83166.1 - 0.00019 21.6 0.0 1.2 9.6 0.0 2.6 2 0 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 RKO83166.1 - 0.0014 18.5 0.1 3.1 7.9 0.0 3.0 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 RKO83166.1 - 0.0064 16.8 2.7 2 8.8 0.2 4.1 3 2 0 3 3 3 1 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO83166.1 - 0.0066 16.0 1.1 0.13 11.8 0.0 2.9 3 0 0 3 3 3 1 Kelch motif UCR_UQCRX_QCR9 PF05365.12 RKO83167.1 - 2.3e-24 85.1 2.1 2.5e-24 85.0 2.1 1.0 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like Tricorn_C1 PF14684.6 RKO83167.1 - 0.086 12.9 0.1 0.1 12.7 0.1 1.1 1 0 0 1 1 1 0 Tricorn protease C1 domain Troponin-I_N PF11636.8 RKO83168.1 - 0.0013 18.6 0.4 0.0063 16.4 0.4 2.2 1 0 0 1 1 1 1 Troponin I residues 1-32 Peptidase_S10 PF00450.22 RKO83174.1 - 2.8e-37 129.1 0.1 6e-37 128.0 0.1 1.5 1 1 0 1 1 1 1 Serine carboxypeptidase Med6 PF04934.14 RKO83174.1 - 0.051 13.4 0.1 0.079 12.7 0.1 1.2 1 0 0 1 1 1 0 MED6 mediator sub complex component BTB_2 PF02214.22 RKO83176.1 - 3.7e-10 40.0 0.0 7e-10 39.1 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain TMF_TATA_bd PF12325.8 RKO83176.1 - 0.018 15.2 2.7 0.022 15.0 2.7 1.2 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding HNH_2 PF13391.6 RKO83177.1 - 6.1e-08 32.7 0.0 1.8e-07 31.2 0.0 1.8 1 1 0 1 1 1 1 HNH endonuclease DUF4200 PF13863.6 RKO83178.1 - 0.0047 17.3 6.8 0.0062 16.9 6.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4200) FAM76 PF16046.5 RKO83178.1 - 0.0079 15.6 3.4 0.0098 15.3 3.4 1.1 1 0 0 1 1 1 1 FAM76 protein DUF641 PF04859.12 RKO83178.1 - 0.0097 16.2 3.5 0.014 15.7 3.5 1.1 1 0 0 1 1 1 1 Plant protein of unknown function (DUF641) DUF4407 PF14362.6 RKO83178.1 - 0.015 14.7 0.3 0.016 14.6 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3552 PF12072.8 RKO83178.1 - 0.031 13.7 7.0 0.04 13.3 7.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) TMF_DNA_bd PF12329.8 RKO83178.1 - 0.035 14.1 9.9 0.058 13.4 9.9 1.4 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding ATG16 PF08614.11 RKO83178.1 - 0.062 13.5 3.7 0.076 13.2 3.7 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) PKcGMP_CC PF16808.5 RKO83178.1 - 0.076 12.9 12.3 1.1 9.1 0.4 2.8 1 1 1 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Borrelia_P83 PF05262.11 RKO83178.1 - 0.086 11.3 3.2 0.097 11.1 3.2 1.0 1 0 0 1 1 1 0 Borrelia P83/100 protein DivIC PF04977.15 RKO83178.1 - 0.17 11.7 4.7 0.24 11.2 4.7 1.2 1 0 0 1 1 1 0 Septum formation initiator Atg14 PF10186.9 RKO83178.1 - 0.44 9.6 4.6 0.57 9.2 4.6 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 AAA_13 PF13166.6 RKO83178.1 - 0.57 8.8 5.6 0.7 8.5 5.6 1.0 1 0 0 1 1 1 0 AAA domain PEARLI-4 PF05278.12 RKO83178.1 - 0.78 9.3 6.9 0.99 8.9 6.9 1.1 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) UPF0242 PF06785.11 RKO83178.1 - 2.1 8.4 7.7 2.8 8.0 7.7 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Vps16_N PF04841.13 RKO83180.1 - 5.1e-44 150.7 0.0 8e-44 150.0 0.0 1.3 1 0 0 1 1 1 1 Vps16, N-terminal region Vps16_C PF04840.12 RKO83180.1 - 2.7e-37 128.5 0.3 3.7e-37 128.1 0.3 1.2 1 0 0 1 1 1 1 Vps16, C-terminal region SUI1 PF01253.22 RKO83181.1 - 0.017 15.7 0.7 0.09 13.3 0.0 2.3 2 0 0 2 2 2 0 Translation initiation factor SUI1 zf-ANAPC11 PF12861.7 RKO83181.1 - 0.026 14.6 0.2 0.39 10.8 0.2 2.7 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Herpes_UL52 PF03121.15 RKO83181.1 - 0.039 13.9 1.1 4 7.4 0.1 2.6 2 0 0 2 2 2 0 Herpesviridae UL52/UL70 DNA primase Herpes_glycoH_C PF17488.2 RKO83181.1 - 0.068 13.0 0.2 0.47 10.2 0.1 2.2 2 0 0 2 2 2 0 Herpesvirus glycoprotein H C-terminal domain SAM_1 PF00536.30 RKO83183.1 - 0.00027 21.3 0.0 0.00064 20.1 0.0 1.6 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_2 PF07647.17 RKO83183.1 - 0.063 13.4 0.1 0.12 12.5 0.1 1.5 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) eIF3_N PF09440.10 RKO83185.1 - 4.1e-29 101.7 3.1 4.1e-29 101.7 3.1 2.7 3 0 0 3 3 3 1 eIF3 subunit 6 N terminal domain PCI PF01399.27 RKO83185.1 - 9.1e-17 61.5 0.1 4.1e-16 59.4 0.0 2.2 2 0 0 2 2 2 1 PCI domain CSN8_PSD8_EIF3K PF10075.9 RKO83185.1 - 0.013 15.5 2.3 4.3 7.3 0.0 3.3 3 1 1 4 4 4 0 CSN8/PSMD8/EIF3K family MoaC PF01967.21 RKO83186.1 - 5.2e-53 178.8 0.9 5.9e-53 178.6 0.9 1.0 1 0 0 1 1 1 1 MoaC family Promethin PF16015.5 RKO83189.1 - 3.4e-09 36.6 12.5 4.4e-09 36.2 12.5 1.1 1 0 0 1 1 1 1 Promethin peroxidase PF00141.23 RKO83190.1 - 2.5e-17 63.4 0.0 3e-17 63.1 0.0 1.1 1 0 0 1 1 1 1 Peroxidase Glyco_hydro_97 PF10566.9 RKO83190.1 - 1.6 8.0 2.7 3.4 6.8 0.3 2.4 2 1 1 3 3 3 0 Glycoside hydrolase 97 PMT PF02366.18 RKO83191.1 - 6.2e-71 238.8 11.4 8.8e-57 192.5 1.2 2.1 1 1 1 2 2 2 2 Dolichyl-phosphate-mannose-protein mannosyltransferase MIR PF02815.19 RKO83191.1 - 4.3e-11 43.0 1.1 7.3e-11 42.3 0.6 1.6 1 1 1 2 2 2 1 MIR domain PMT_2 PF13231.6 RKO83191.1 - 0.0024 18.1 6.4 0.0024 18.1 6.4 2.2 2 0 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase BetaGal_dom4_5 PF13364.6 RKO83192.1 - 3.2e-25 88.9 0.2 2.6e-23 82.8 0.1 2.4 2 0 0 2 2 2 1 Beta-galactosidase jelly roll domain BetaGal_dom2 PF10435.9 RKO83192.1 - 2.4e-23 82.9 0.0 3.7e-23 82.3 0.0 1.2 1 0 0 1 1 1 1 Beta-galactosidase, domain 2 Glyco_hydro_35 PF01301.19 RKO83192.1 - 7.2e-15 55.4 0.2 9.8e-15 55.0 0.2 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 35 BetaGal_dom3 PF13363.6 RKO83192.1 - 6e-09 35.4 0.1 4.4e-08 32.6 0.0 2.4 2 1 0 2 2 2 1 Beta-galactosidase, domain 3 F-box-like PF12937.7 RKO83195.1 - 3.1e-08 33.4 0.6 5.4e-08 32.6 0.6 1.4 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO83195.1 - 3.3e-07 30.0 2.2 4.5e-07 29.6 2.2 1.2 1 0 0 1 1 1 1 F-box domain DUF4148 PF13663.6 RKO83198.1 - 1.1 9.5 0.1 1.1 9.5 0.1 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4148) Ras PF00071.22 RKO83201.1 - 5e-43 146.5 0.0 6e-43 146.3 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO83201.1 - 8.9e-20 71.1 0.0 1.3e-19 70.6 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO83201.1 - 2e-08 33.9 0.0 2.5e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 RKO83201.1 - 0.0011 18.6 0.0 0.0014 18.2 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1_Xtn PF16897.5 RKO83201.1 - 0.018 15.0 0.0 0.022 14.8 0.0 1.3 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Clathrin PF00637.20 RKO83201.1 - 0.17 11.7 0.0 0.32 10.9 0.0 1.4 1 1 0 1 1 1 0 Region in Clathrin and VPS RsgA_GTPase PF03193.16 RKO83201.1 - 0.17 11.8 0.0 0.4 10.6 0.0 1.5 1 1 1 2 2 2 0 RsgA GTPase Urotensin_II PF02083.15 RKO83202.1 - 0.65 9.8 7.0 3.2 7.6 0.2 2.8 2 0 0 2 2 2 0 Urotensin II ChaC PF04752.12 RKO83203.1 - 1.1e-05 25.6 0.5 2.6e-05 24.3 0.2 1.9 2 1 0 2 2 2 1 ChaC-like protein DUF1281 PF06924.11 RKO83204.1 - 0.12 11.9 0.1 0.21 11.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1281) ELFV_dehydrog PF00208.21 RKO83205.1 - 1.1e-05 25.4 0.0 2.1e-05 24.4 0.0 1.3 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DUF2013 PF09431.10 RKO83206.1 - 1.1e-22 80.7 0.5 2.1e-22 79.8 0.4 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF2013) Cyto_heme_lyase PF01265.17 RKO83207.1 - 2.3e-11 43.9 2.0 2.5e-11 43.7 2.0 1.0 1 0 0 1 1 1 1 Cytochrome c/c1 heme lyase Ribosomal_L6e_N PF03868.15 RKO83208.1 - 0.18 12.0 2.0 0.28 11.4 2.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L6, N-terminal domain Sec1 PF00995.23 RKO83209.1 - 6.4e-33 114.8 0.1 1.1e-32 114.1 0.1 1.4 1 1 0 1 1 1 1 Sec1 family ApbA PF02558.16 RKO83211.1 - 5.3e-14 52.1 0.0 7.1e-14 51.7 0.0 1.1 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA DUF247 PF03140.15 RKO83212.1 - 0.061 12.5 0.4 0.079 12.2 0.4 1.1 1 0 0 1 1 1 0 Plant protein of unknown function Thioredoxin PF00085.20 RKO83213.1 - 9.5e-17 60.9 0.0 5.4e-09 36.0 0.0 2.5 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 RKO83213.1 - 1.6e-10 41.2 0.0 5.5e-07 29.7 0.0 3.1 2 1 1 3 3 3 2 Thioredoxin-like domain KaiB PF07689.12 RKO83213.1 - 0.028 14.2 0.0 0.076 12.8 0.0 1.7 1 0 0 1 1 1 0 KaiB domain Thioredoxin_2 PF13098.6 RKO83213.1 - 0.14 12.7 0.0 2 8.9 0.0 2.7 3 0 0 3 3 3 0 Thioredoxin-like domain PIF1 PF05970.14 RKO83214.1 - 0.099 11.8 0.0 0.15 11.2 0.0 1.2 1 0 0 1 1 1 0 PIF1-like helicase Transformer PF06495.11 RKO83214.1 - 5.2 7.1 9.0 0.23 11.5 2.5 1.8 1 1 0 2 2 2 0 Fruit fly transformer protein Astro_capsid_p PF12226.8 RKO83215.1 - 0.054 12.6 0.0 0.12 11.5 0.0 1.5 2 0 0 2 2 2 0 Turkey astrovirus capsid protein DUF370 PF04025.12 RKO83215.1 - 0.26 11.4 0.9 0.55 10.4 0.9 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF370) TMEM154 PF15102.6 RKO83216.1 - 0.0026 17.7 2.0 0.0075 16.2 0.0 2.3 2 0 0 2 2 2 1 TMEM154 protein family Kelch_5 PF13854.6 RKO83217.1 - 2.7e-06 27.2 0.1 0.031 14.2 0.1 2.8 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 RKO83217.1 - 0.00044 20.4 0.5 0.46 10.8 0.2 2.6 2 1 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 RKO83217.1 - 0.0007 19.5 0.5 0.39 10.8 0.0 2.9 1 1 1 2 2 2 2 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO83217.1 - 0.0007 19.1 0.1 1.4 8.6 0.0 2.9 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 RKO83217.1 - 0.0031 17.7 0.0 2.9 8.3 0.0 2.5 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_2 PF07646.15 RKO83217.1 - 0.0085 16.0 0.4 2.8 8.1 0.0 2.7 2 1 1 3 3 3 2 Kelch motif PHD_like PF12910.7 RKO83218.1 - 0.15 12.1 0.2 0.26 11.3 0.2 1.3 1 0 0 1 1 1 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system zf-CCHC_4 PF14392.6 RKO83218.1 - 1.4 8.7 8.9 5 6.9 0.4 3.4 3 0 0 3 3 3 0 Zinc knuckle OTT_1508_deam PF14441.6 RKO83218.1 - 3.1 7.9 7.5 5.1 7.2 0.0 2.9 3 0 0 3 3 3 0 OTT_1508-like deaminase zf-CCHC_2 PF13696.6 RKO83218.1 - 4.5 7.2 11.0 0.91 9.4 1.9 2.8 2 0 0 2 2 2 0 Zinc knuckle zf-ribbon_3 PF13248.6 RKO83218.1 - 5.7 6.5 8.0 0.33 10.4 0.2 3.0 3 0 0 3 3 3 0 zinc-ribbon domain MRP-S27 PF10037.9 RKO83218.1 - 7.1 5.4 9.8 3.2 6.5 2.0 2.2 2 0 0 2 2 2 0 Mitochondrial 28S ribosomal protein S27 Sec23_trunk PF04811.15 RKO83219.1 - 4.4e-69 232.7 0.0 5.8e-69 232.3 0.0 1.1 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain Sec23_BS PF08033.12 RKO83219.1 - 7.2e-17 61.9 0.0 1.6e-16 60.8 0.0 1.6 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain zf-Sec23_Sec24 PF04810.15 RKO83219.1 - 2.4e-15 56.3 4.8 4e-15 55.6 4.8 1.4 1 0 0 1 1 1 1 Sec23/Sec24 zinc finger LON_substr_bdg PF02190.16 RKO83220.1 - 4.8e-22 78.9 0.1 5.9e-22 78.6 0.1 1.1 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain Acyl-CoA_dh_M PF02770.19 RKO83222.1 - 8.5e-24 83.6 0.0 1.4e-23 82.9 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 RKO83222.1 - 1.4e-23 83.7 0.1 2.2e-23 83.2 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 RKO83222.1 - 6.3e-19 68.7 0.0 1.4e-18 67.6 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Cyt-b5 PF00173.28 RKO83222.1 - 2.7e-13 49.9 0.3 6.7e-13 48.6 0.1 1.8 2 0 0 2 2 2 1 Cytochrome b5-like Heme/Steroid binding domain Acyl-CoA_dh_2 PF08028.11 RKO83222.1 - 0.0068 16.7 0.0 0.014 15.7 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain HpaB_N PF11794.8 RKO83222.1 - 0.14 11.8 0.4 1.1 8.9 0.4 2.2 1 1 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase N terminal YL1 PF05764.13 RKO83223.1 - 3.6e-20 73.1 1.3 7.1e-20 72.2 1.3 1.5 1 0 0 1 1 1 1 YL1 nuclear protein YL1_C PF08265.11 RKO83223.1 - 2.9e-13 49.3 0.7 5.2e-13 48.5 0.7 1.4 1 0 0 1 1 1 1 YL1 nuclear protein C-terminal domain Ribosomal_L12 PF00542.19 RKO83224.1 - 4.9e-22 78.1 6.5 5.8e-22 77.8 6.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L7/L12 C-terminal domain HisG_C PF08029.11 RKO83224.1 - 0.029 14.5 0.0 0.19 11.9 0.0 2.1 1 1 0 2 2 2 0 HisG, C-terminal domain DsrD PF08679.11 RKO83224.1 - 0.49 10.7 3.4 1.8 8.9 0.5 2.3 1 1 2 3 3 3 0 Dissimilatory sulfite reductase D (DsrD) WW PF00397.26 RKO83226.1 - 0.00015 21.8 0.1 0.00028 20.9 0.1 1.5 1 0 0 1 1 1 1 WW domain Prefoldin PF02996.17 RKO83227.1 - 9.9e-29 99.7 4.2 1.4e-28 99.2 4.2 1.2 1 0 0 1 1 1 1 Prefoldin subunit End3 PF12761.7 RKO83227.1 - 0.00023 21.4 5.4 0.001 19.3 0.3 2.1 1 1 1 2 2 2 1 Actin cytoskeleton-regulatory complex protein END3 Prefoldin_2 PF01920.20 RKO83227.1 - 0.0083 16.1 3.5 0.14 12.1 0.1 2.2 2 0 0 2 2 2 1 Prefoldin subunit Rx_N PF18052.1 RKO83227.1 - 0.0097 16.2 1.9 3.1 8.1 0.3 2.3 2 0 0 2 2 2 2 Rx N-terminal domain Rab_bind PF16704.5 RKO83227.1 - 0.036 14.1 0.8 0.1 12.7 0.2 2.0 2 0 0 2 2 2 0 Rab binding domain FlaC_arch PF05377.11 RKO83227.1 - 0.049 14.0 1.6 1.6 9.2 0.2 2.5 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) KxDL PF10241.9 RKO83227.1 - 0.091 13.1 2.4 1.2 9.4 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein DUF1462 PF07315.11 RKO83227.1 - 0.19 12.0 1.2 4.7 7.6 0.2 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF1462) Tubulin_3 PF14881.6 RKO83228.1 - 6.1e-34 117.3 0.7 8.4e-34 116.8 0.7 1.1 1 0 0 1 1 1 1 Tubulin domain Tubulin PF00091.25 RKO83228.1 - 3.3e-08 34.0 0.0 4.6e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Ribosomal_S19e PF01090.19 RKO83231.1 - 3.4e-57 192.0 0.1 3.9e-57 191.8 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e Arrestin_N PF00339.29 RKO83233.1 - 2.8e-11 43.7 0.0 7.4e-11 42.3 0.0 1.7 2 0 0 2 2 2 1 Arrestin (or S-antigen), N-terminal domain Pkinase PF00069.25 RKO83235.1 - 1.4e-43 149.1 0.0 1.6e-43 149.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO83235.1 - 2.5e-23 82.7 0.0 2.9e-23 82.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO83235.1 - 0.0085 16.0 0.0 0.025 14.5 0.0 1.6 1 1 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 RKO83235.1 - 0.015 14.3 0.0 0.29 10.0 0.0 2.0 1 1 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 RKO83235.1 - 0.029 13.7 0.0 0.062 12.6 0.0 1.5 2 0 0 2 2 2 0 Kinase-like Pkinase PF00069.25 RKO83236.1 - 1e-47 162.7 0.0 1.1e-47 162.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO83236.1 - 1.5e-22 80.1 0.0 1.8e-22 79.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO83236.1 - 0.002 18.1 0.0 0.012 15.6 0.0 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 RKO83236.1 - 0.012 15.0 0.0 0.018 14.4 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family GerPB PF10803.8 RKO83236.1 - 0.089 12.9 0.0 0.21 11.7 0.0 1.6 2 0 0 2 2 2 0 Spore germination GerPB ApbA PF02558.16 RKO83237.1 - 1.9e-05 24.3 0.0 3.5e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Rossmann-like PF10727.9 RKO83237.1 - 0.057 13.3 1.0 5.4 6.9 0.1 3.0 2 1 1 3 3 3 0 Rossmann-like domain Acetyltransf_14 PF03421.16 RKO83238.1 - 0.065 13.3 0.0 0.18 11.9 0.0 1.7 2 0 0 2 2 2 0 YopJ Serine/Threonine acetyltransferase zf-CCCH_4 PF18044.1 RKO83239.1 - 6.8e-08 32.1 2.8 1.1e-07 31.5 2.8 1.3 1 0 0 1 1 1 1 CCCH-type zinc finger zf_CCCH_4 PF18345.1 RKO83239.1 - 2.4e-05 24.2 3.2 4e-05 23.5 3.2 1.3 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH PF00642.24 RKO83239.1 - 6.7e-05 22.7 3.9 0.00011 22.0 3.9 1.3 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 RKO83239.1 - 0.042 14.3 3.2 0.085 13.4 3.2 1.4 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger Torus PF16131.5 RKO83239.1 - 0.054 14.2 0.3 0.11 13.3 0.3 1.4 1 0 0 1 1 1 0 Torus domain RWD PF05773.22 RKO83239.1 - 0.059 13.7 0.0 0.16 12.3 0.0 1.7 1 0 0 1 1 1 0 RWD domain Nop14 PF04147.12 RKO83239.1 - 0.12 10.5 0.5 0.15 10.2 0.5 1.1 1 0 0 1 1 1 0 Nop14-like family Astro_capsid_p PF12226.8 RKO83239.1 - 0.33 10.0 2.2 0.49 9.5 2.2 1.1 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Cwf_Cwc_15 PF04889.12 RKO83239.1 - 1.5 8.5 6.2 2.3 7.9 6.2 1.2 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein IBR PF01485.21 RKO83240.1 - 4.3e-06 26.9 11.1 0.00026 21.1 1.3 3.0 3 0 0 3 3 3 2 IBR domain, a half RING-finger domain GSHPx PF00255.19 RKO83241.1 - 2e-31 107.8 0.1 2.2e-31 107.7 0.1 1.0 1 0 0 1 1 1 1 Glutathione peroxidase AhpC-TSA PF00578.21 RKO83241.1 - 0.00055 19.8 0.0 0.00056 19.8 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 RKO83241.1 - 0.0084 15.8 0.0 0.0093 15.7 0.0 1.1 1 0 0 1 1 1 1 Redoxin GSHPx PF00255.19 RKO83242.1 - 6.8e-42 141.4 0.1 8.3e-42 141.2 0.1 1.1 1 0 0 1 1 1 1 Glutathione peroxidase Redoxin PF08534.10 RKO83242.1 - 0.0017 18.0 0.0 0.0029 17.3 0.0 1.5 1 1 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 RKO83242.1 - 0.0048 16.8 0.0 0.0059 16.5 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family SUI1 PF01253.22 RKO83242.1 - 0.11 13.0 0.0 0.22 12.1 0.0 1.5 1 0 0 1 1 1 0 Translation initiation factor SUI1 Ank_4 PF13637.6 RKO83243.1 - 7.4e-06 26.4 0.7 0.19 12.4 0.0 3.9 4 1 1 5 5 5 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO83243.1 - 0.0003 21.3 0.0 0.046 14.3 0.0 3.2 1 1 3 4 4 4 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO83243.1 - 0.00042 20.6 0.1 0.1 12.9 0.0 3.3 2 1 1 3 3 3 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO83243.1 - 0.002 18.5 0.1 2.6 8.9 0.0 4.2 5 0 0 5 5 5 1 Ankyrin repeat Cu2_monoox_C PF03712.15 RKO83244.1 - 5.7e-31 107.2 0.0 1.1e-30 106.2 0.0 1.4 1 0 0 1 1 1 1 Copper type II ascorbate-dependent monooxygenase, C-terminal domain Cu2_monooxygen PF01082.20 RKO83244.1 - 1.7e-28 99.4 0.2 3.1e-28 98.6 0.2 1.4 1 0 0 1 1 1 1 Copper type II ascorbate-dependent monooxygenase, N-terminal domain DOMON PF03351.17 RKO83244.1 - 1.1e-10 41.8 0.2 3.4e-10 40.2 0.1 2.0 2 0 0 2 2 2 1 DOMON domain DNA_primase_S PF01896.19 RKO83245.1 - 8.7e-34 117.1 1.8 1.2e-33 116.6 1.8 1.2 1 0 0 1 1 1 1 DNA primase small subunit Trns_repr_metal PF02583.17 RKO83246.1 - 0.032 14.6 0.0 0.056 13.8 0.0 1.3 1 0 0 1 1 1 0 Metal-sensitive transcriptional repressor FAP PF07174.11 RKO83246.1 - 0.071 12.6 10.5 0.098 12.1 10.5 1.2 1 0 0 1 1 1 0 Fibronectin-attachment protein (FAP) FMO-like PF00743.19 RKO83247.1 - 3.9e-25 88.3 0.0 4.5e-25 88.1 0.0 1.0 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like NAD_binding_8 PF13450.6 RKO83247.1 - 1.3e-09 38.2 0.0 3.6e-09 36.7 0.0 1.8 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 RKO83247.1 - 4.9e-09 36.0 0.0 2.4e-06 27.1 0.0 2.1 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase FAD_binding_3 PF01494.19 RKO83247.1 - 1.6e-07 30.9 0.0 1.1e-06 28.1 0.0 1.9 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 RKO83247.1 - 2.2e-07 30.4 0.0 2.6e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 RKO83247.1 - 8e-07 28.9 0.9 0.0001 22.1 0.2 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 RKO83247.1 - 4.4e-06 26.2 0.0 4e-05 23.0 0.0 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 RKO83247.1 - 1.4e-05 24.0 0.1 2.2e-05 23.4 0.1 1.2 1 0 0 1 1 1 1 HI0933-like protein NAD_binding_9 PF13454.6 RKO83247.1 - 5.8e-05 23.1 0.4 0.00064 19.7 0.4 2.1 1 1 0 1 1 1 1 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 RKO83247.1 - 8.5e-05 21.8 0.0 0.00036 19.7 0.0 1.8 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 RKO83247.1 - 0.00022 20.6 0.1 0.00031 20.1 0.1 1.1 1 0 0 1 1 1 1 Thi4 family Pyr_redox PF00070.27 RKO83247.1 - 0.00049 20.6 0.2 0.001 19.6 0.2 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 RKO83247.1 - 0.011 15.6 0.0 0.016 15.1 0.0 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 RKO83247.1 - 0.012 14.9 0.4 0.019 14.3 0.4 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 RKO83247.1 - 0.036 13.4 0.1 0.051 12.9 0.1 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase GIDA PF01134.22 RKO83247.1 - 0.052 12.6 0.0 0.15 11.1 0.1 1.6 2 0 0 2 2 2 0 Glucose inhibited division protein A UDPG_MGDP_dh_N PF03721.14 RKO83247.1 - 0.096 12.3 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IlvN PF07991.12 RKO83247.1 - 0.11 12.0 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_7 PF13241.6 RKO83247.1 - 0.14 12.6 0.0 0.18 12.2 0.0 1.5 1 1 0 1 1 1 0 Putative NAD(P)-binding Shikimate_DH PF01488.20 RKO83247.1 - 0.14 12.2 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase K_oxygenase PF13434.6 RKO83247.1 - 0.23 10.6 0.0 2.6 7.1 0.0 1.9 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) DUF4129 PF13559.6 RKO83248.1 - 2.3e-05 24.5 0.2 4.1e-05 23.7 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4129) NICE-3 PF07406.11 RKO83248.1 - 0.067 13.2 0.2 0.077 13.0 0.2 1.3 1 1 0 1 1 1 0 NICE-3 protein Usg PF06233.12 RKO83250.1 - 0.12 12.5 0.1 0.19 11.9 0.1 1.3 1 0 0 1 1 1 0 Usg-like family UPF0489 PF12640.7 RKO83251.1 - 5.7 7.1 8.1 14 5.9 0.6 2.2 1 1 1 2 2 2 0 UPF0489 domain ACBP PF00887.19 RKO83252.1 - 2.3e-06 27.7 0.1 7.4e-06 26.1 0.1 1.9 1 1 0 1 1 1 1 Acyl CoA binding protein TMEM82 PF15816.5 RKO83252.1 - 0.032 13.2 0.0 0.041 12.8 0.0 1.1 1 0 0 1 1 1 0 Transmembrane protein 82 DIMCO_N PF16844.5 RKO83252.1 - 0.079 13.3 0.2 0.14 12.5 0.2 1.3 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor, N-terminal PP2C PF00481.21 RKO83254.1 - 6e-67 226.0 0.0 8.2e-67 225.5 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SUV3_C PF12513.8 RKO83254.1 - 0.23 11.4 0.2 31 4.6 0.0 2.6 2 0 0 2 2 2 0 Mitochondrial degradasome RNA helicase subunit C terminal Tyrosinase PF00264.20 RKO83255.1 - 8.6e-29 101.4 12.2 8.1e-28 98.2 12.2 2.0 1 1 0 1 1 1 1 Common central domain of tyrosinase RRM_1 PF00076.22 RKO83256.1 - 1.8e-12 46.9 0.0 2.9e-12 46.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SBP PF03110.14 RKO83256.1 - 0.12 12.7 0.2 1.9 8.9 0.0 2.2 2 0 0 2 2 2 0 SBP domain Fe-ADH PF00465.19 RKO83258.1 - 4.6e-29 101.4 0.0 5.9e-29 101.0 0.0 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 RKO83258.1 - 3.1e-09 36.9 0.0 4.5e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Peripla_BP_6 PF13458.6 RKO83258.1 - 0.00019 21.2 0.0 0.00025 20.8 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein Phosphoesterase PF04185.14 RKO83260.1 - 1e-28 100.6 0.9 8e-28 97.6 0.3 2.4 1 1 1 2 2 2 1 Phosphoesterase family IF4E PF01652.18 RKO83261.1 - 4e-53 179.5 0.1 4.6e-53 179.3 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E BRCT PF00533.26 RKO83265.1 - 0.0009 19.6 0.0 0.0013 19.1 0.0 1.3 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain PTCB-BRCT PF12738.7 RKO83265.1 - 0.022 14.7 0.0 0.091 12.7 0.0 1.8 2 0 0 2 2 2 0 twin BRCT domain Ribosomal_60s PF00428.19 RKO83266.1 - 1.5e-27 96.0 8.2 1.8e-27 95.8 8.2 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein UPF0193 PF05250.11 RKO83267.1 - 2.5e-10 40.6 0.1 2.9e-10 40.3 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0193) EIN3 PF04873.13 RKO83267.1 - 0.059 12.7 0.0 0.066 12.5 0.0 1.1 1 0 0 1 1 1 0 Ethylene insensitive 3 Draxin PF15550.6 RKO83267.1 - 0.11 12.3 0.7 0.13 12.1 0.7 1.0 1 0 0 1 1 1 0 Draxin MMS1_N PF10433.9 RKO83270.1 - 2.7e-15 56.0 0.0 3.9e-15 55.5 0.0 1.2 1 0 0 1 1 1 1 Mono-functional DNA-alkylating methyl methanesulfonate N-term DUF2959 PF11172.8 RKO83271.1 - 0.02 15.1 2.2 0.021 15.0 2.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2959) Mod_r PF07200.13 RKO83271.1 - 0.033 14.3 6.8 1.2 9.2 0.9 2.0 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein FlaC_arch PF05377.11 RKO83271.1 - 0.085 13.3 2.8 5.5 7.5 0.3 2.8 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF4047 PF13256.6 RKO83271.1 - 0.099 12.8 0.8 0.11 12.7 0.8 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4047) PRP1_N PF06424.12 RKO83271.1 - 0.12 12.7 2.2 0.1 13.0 1.1 1.5 1 1 0 1 1 1 0 PRP1 splicing factor, N-terminal Spc7 PF08317.11 RKO83271.1 - 0.14 11.0 6.3 0.16 10.8 6.3 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein Fib_alpha PF08702.10 RKO83271.1 - 0.16 12.1 0.7 0.2 11.8 0.7 1.1 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family NPV_P10 PF05531.12 RKO83271.1 - 0.3 11.6 1.6 1.4 9.4 0.7 2.0 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein GAS PF13851.6 RKO83271.1 - 0.59 9.4 8.8 1 8.7 8.8 1.4 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding GrpE PF01025.19 RKO83271.1 - 1.2 8.8 8.7 51 3.5 8.7 2.0 1 1 0 1 1 1 0 GrpE CCDC-167 PF15188.6 RKO83271.1 - 1.2 9.5 7.7 3.2 8.2 7.7 1.7 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 DLH PF01738.18 RKO83272.1 - 1e-05 25.2 0.0 1.2e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family DUF5499 PF17603.2 RKO83272.1 - 0.026 15.1 0.0 0.043 14.4 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5499) AP_endonuc_2 PF01261.24 RKO83272.1 - 0.15 11.5 0.0 0.21 11.0 0.0 1.3 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel SH3_9 PF14604.6 RKO83273.1 - 6.5e-09 35.5 0.2 1.1e-08 34.7 0.2 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO83273.1 - 5.7e-06 25.9 0.1 8.7e-06 25.2 0.1 1.3 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 RKO83273.1 - 0.0062 16.2 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain eIF-1a PF01176.19 RKO83275.1 - 5.9e-14 51.6 0.0 8.5e-14 51.1 0.0 1.3 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 DHR10 PF18595.1 RKO83276.1 - 0.017 15.2 1.0 0.017 15.2 1.0 4.2 3 2 0 3 3 3 0 Designed helical repeat protein 10 domain CK2S PF15011.6 RKO83276.1 - 0.035 14.0 5.5 0.66 9.8 0.3 3.0 2 1 1 3 3 3 0 Casein Kinase 2 substrate DUF4763 PF15960.5 RKO83276.1 - 0.055 12.8 17.2 0.15 11.4 5.1 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4763) Cor1 PF04803.12 RKO83276.1 - 0.11 12.7 26.9 0.43 10.8 5.1 3.3 2 1 1 3 3 3 0 Cor1/Xlr/Xmr conserved region Collagen_mid PF15984.5 RKO83276.1 - 0.23 11.2 0.0 0.59 9.9 0.0 1.6 1 0 0 1 1 1 0 Bacterial collagen, middle region EzrA PF06160.12 RKO83276.1 - 0.25 9.5 25.8 1.5 6.9 0.5 3.1 2 1 1 3 3 3 0 Septation ring formation regulator, EzrA DUF1664 PF07889.12 RKO83276.1 - 0.27 11.3 17.5 1.3 9.1 2.7 3.5 2 1 0 3 3 3 0 Protein of unknown function (DUF1664) Fib_alpha PF08702.10 RKO83276.1 - 0.54 10.4 23.0 0.15 12.3 1.7 3.7 3 1 0 3 3 3 0 Fibrinogen alpha/beta chain family HalX PF08663.10 RKO83276.1 - 1.1 9.6 4.4 9.8 6.6 0.2 3.0 3 0 0 3 3 2 0 HalX domain Sec20 PF03908.13 RKO83276.1 - 1.5 8.8 17.8 0.21 11.5 1.7 4.6 3 2 3 6 6 6 0 Sec20 Sec34 PF04136.15 RKO83276.1 - 1.9 8.3 20.1 0.36 10.7 1.4 3.6 2 1 2 4 4 4 0 Sec34-like family NPV_P10 PF05531.12 RKO83276.1 - 2.7 8.5 17.9 8.4 6.9 0.3 4.5 3 2 1 4 4 4 0 Nucleopolyhedrovirus P10 protein SHE3 PF17078.5 RKO83276.1 - 4.8 6.8 26.9 2 8.1 2.8 3.1 1 1 0 2 2 2 0 SWI5-dependent HO expression protein 3 Laminin_II PF06009.12 RKO83276.1 - 5.4 7.0 17.4 13 5.8 3.9 3.6 2 2 0 3 3 3 0 Laminin Domain II DUF745 PF05335.13 RKO83276.1 - 6.4 6.4 13.8 1.5 8.5 2.4 3.2 2 1 2 4 4 4 0 Protein of unknown function (DUF745) KxDL PF10241.9 RKO83276.1 - 9.4 6.6 17.6 1.3 9.3 3.3 3.8 2 2 0 3 3 3 0 Uncharacterized conserved protein RNA_pol_Rpb5_C PF01191.19 RKO83277.1 - 7e-28 96.3 0.1 1.3e-27 95.4 0.1 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain RNA_pol_Rpb5_N PF03871.14 RKO83277.1 - 4.3e-13 49.7 0.9 8e-13 48.8 0.9 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb5, N-terminal domain TOPRIM_C PF16898.5 RKO83277.1 - 0.064 13.5 0.4 0.12 12.7 0.4 1.5 1 0 0 1 1 1 0 C-terminal associated domain of TOPRIM F-box PF00646.33 RKO83279.1 - 0.053 13.4 0.3 0.34 10.9 0.3 2.4 1 1 0 1 1 1 0 F-box domain F-box-like PF12937.7 RKO83279.1 - 0.22 11.4 5.7 0.11 12.5 2.3 2.4 2 0 0 2 2 2 0 F-box-like Methyltransf_23 PF13489.6 RKO83280.1 - 1.6e-06 28.0 0.0 2.5e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO83280.1 - 1.7e-06 27.9 0.3 3.3e-06 27.0 0.3 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 RKO83280.1 - 7.8e-06 26.5 0.0 1.7e-05 25.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 RKO83280.1 - 9.9e-06 25.4 0.0 1.7e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.12 RKO83280.1 - 0.0075 17.0 0.0 0.036 14.8 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 RKO83280.1 - 0.0076 16.9 0.0 0.022 15.4 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 RKO83280.1 - 0.01 15.2 0.0 0.016 14.5 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family FtsJ PF01728.19 RKO83280.1 - 0.021 14.9 0.0 0.027 14.6 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase GCD14 PF08704.10 RKO83280.1 - 0.027 14.1 0.0 0.042 13.5 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Fibrillarin PF01269.17 RKO83280.1 - 0.05 12.7 0.0 0.079 12.1 0.0 1.2 1 0 0 1 1 1 0 Fibrillarin Helicase_C PF00271.31 RKO83284.1 - 1.5e-14 54.2 0.0 3.1e-14 53.3 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SBP_bac_1 PF01547.25 RKO83287.1 - 0.031 14.2 1.4 0.047 13.6 1.4 1.2 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein EMP24_GP25L PF01105.24 RKO83290.1 - 1.8e-47 161.7 0.4 3.7e-47 160.6 0.4 1.5 1 1 0 1 1 1 1 emp24/gp25L/p24 family/GOLD Phage_GP20 PF06810.11 RKO83292.1 - 0.0029 17.4 4.1 0.006 16.4 4.1 1.5 1 0 0 1 1 1 1 Phage minor structural protein GP20 Macoilin PF09726.9 RKO83292.1 - 0.014 14.0 1.4 0.022 13.3 1.4 1.4 1 0 0 1 1 1 0 Macoilin family CdvA PF18822.1 RKO83292.1 - 0.015 15.1 4.4 0.026 14.4 3.4 1.8 1 1 0 1 1 1 0 CdvA-like coiled-coil domain V-SNARE PF05008.15 RKO83292.1 - 0.018 15.4 11.4 0.59 10.6 0.8 3.5 2 1 1 3 3 3 0 Vesicle transport v-SNARE protein N-terminus Rootletin PF15035.6 RKO83292.1 - 0.025 14.6 12.7 0.017 15.2 10.3 1.8 1 1 0 2 2 2 0 Ciliary rootlet component, centrosome cohesion Filament PF00038.21 RKO83292.1 - 0.06 12.9 15.2 0.46 10.0 3.7 2.3 1 1 1 2 2 2 0 Intermediate filament protein ATG16 PF08614.11 RKO83292.1 - 0.064 13.5 18.4 0.2 11.9 7.5 2.5 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Seryl_tRNA_N PF02403.22 RKO83292.1 - 0.27 11.5 9.9 0.15 12.3 4.1 2.8 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF5082 PF16888.5 RKO83292.1 - 0.37 11.1 2.3 1.7 9.0 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DUF1664 PF07889.12 RKO83292.1 - 0.5 10.4 3.0 19 5.3 0.9 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF1664) DUF4201 PF13870.6 RKO83292.1 - 0.68 9.6 8.5 3.7 7.3 3.2 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF4201) Atg14 PF10186.9 RKO83292.1 - 0.73 8.9 8.0 1.3 8.1 8.0 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CENP-F_leu_zip PF10473.9 RKO83292.1 - 0.9 9.6 20.6 0.13 12.3 0.7 2.6 2 1 1 3 3 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF724 PF05266.14 RKO83292.1 - 1.5 8.6 12.2 3.9 7.3 3.2 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF724) WXG100 PF06013.12 RKO83292.1 - 1.8 8.8 8.1 2.4 8.5 1.2 3.1 1 1 1 3 3 3 0 Proteins of 100 residues with WXG Spc7 PF08317.11 RKO83292.1 - 2 7.2 15.3 1.5 7.6 0.7 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein CENP-Q PF13094.6 RKO83292.1 - 2 8.6 16.4 41 4.3 16.3 2.7 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit DUF501 PF04417.12 RKO83292.1 - 2.1 8.2 4.6 1.1 9.0 1.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF501) Golgin_A5 PF09787.9 RKO83292.1 - 2.1 7.7 17.9 0.037 13.5 10.5 1.8 2 1 0 2 2 1 0 Golgin subfamily A member 5 DUF3450 PF11932.8 RKO83292.1 - 2.4 7.4 13.6 0.24 10.7 2.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) BRE1 PF08647.11 RKO83292.1 - 2.6 8.2 9.3 5.1 7.2 5.6 2.6 1 1 1 2 2 2 0 BRE1 E3 ubiquitin ligase UPF0242 PF06785.11 RKO83292.1 - 3.3 7.8 4.9 11 6.1 4.9 2.0 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus OmpH PF03938.14 RKO83292.1 - 4.1 7.7 10.3 0.32 11.3 3.6 2.2 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) BAR_2 PF10455.9 RKO83292.1 - 4.5 6.3 8.8 1.7 7.7 4.9 2.0 2 0 0 2 2 2 0 Bin/amphiphysin/Rvs domain for vesicular trafficking THOC7 PF05615.13 RKO83292.1 - 9.3 6.5 20.0 7.9 6.8 11.6 2.7 1 1 1 2 2 2 0 Tho complex subunit 7 HIP1_clath_bdg PF16515.5 RKO83292.1 - 9.7 6.9 17.9 0.41 11.3 3.4 3.2 2 1 0 3 3 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 zf-C2H2_2 PF12756.7 RKO83295.1 - 0.0013 19.0 0.0 0.0029 17.9 0.0 1.5 2 0 0 2 2 2 1 C2H2 type zinc-finger (2 copies) TFIIIC_sub6 PF10419.9 RKO83297.1 - 2.6e-11 43.2 0.0 2.9e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 TFIIIC subunit triple barrel domain Rrp44_S1 PF17215.3 RKO83298.1 - 8.6e-14 51.3 0.0 1.5e-13 50.5 0.0 1.4 1 0 0 1 1 1 1 S1 domain Dis3l2_C_term PF17877.1 RKO83298.1 - 5.7e-05 23.4 0.0 8e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 DIS3-like exonuclease 2 C terminal RRM_1 PF00076.22 RKO83300.1 - 1.7e-32 111.0 7.2 7.9e-16 57.6 0.2 3.5 4 0 0 4 4 4 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 RKO83300.1 - 1.4e-15 56.9 0.1 0.00013 21.8 0.0 3.3 3 0 0 3 3 3 3 Occluded RNA-recognition motif Nup35_RRM_2 PF14605.6 RKO83300.1 - 3.2e-06 27.1 0.1 0.13 12.3 0.0 3.1 3 0 0 3 3 3 2 Nup53/35/40-type RNA recognition motif RRM_3 PF08777.11 RKO83300.1 - 0.00017 21.6 4.0 0.073 13.1 0.1 3.7 4 0 0 4 4 4 2 RNA binding motif DUF1866 PF08952.11 RKO83300.1 - 0.00056 19.8 0.0 0.14 12.0 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF1866) RRM_7 PF16367.5 RKO83300.1 - 0.0096 16.0 0.2 5 7.3 0.0 3.8 3 1 0 3 3 3 1 RNA recognition motif PHM7_cyt PF14703.6 RKO83300.1 - 0.2 11.9 4.7 1.2 9.3 0.0 3.5 2 2 1 3 3 3 0 Cytosolic domain of 10TM putative phosphate transporter PhoLip_ATPase_C PF16212.5 RKO83303.1 - 3.1e-28 99.2 16.7 3.9e-27 95.6 16.7 2.0 1 1 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal DDE_Tnp_1_assoc PF13808.6 RKO83303.1 - 0.018 15.1 0.5 0.045 13.8 0.3 1.7 1 1 0 1 1 1 0 DDE_Tnp_1-associated Ribosomal_L5e PF17144.4 RKO83304.1 - 4.4e-85 283.7 0.1 4.4e-85 283.7 0.1 1.7 2 0 0 2 2 2 1 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18_c PF14204.6 RKO83304.1 - 8.9e-34 116.3 8.6 8.9e-34 116.3 8.6 2.0 2 0 0 2 2 2 1 Ribosomal L18 C-terminal region P53_C PF11619.8 RKO83304.1 - 2 8.5 5.2 4 7.6 0.0 2.7 2 1 0 2 2 2 0 Transcription factor P53 - C terminal domain WD40 PF00400.32 RKO83305.1 - 3.1e-08 34.1 1.5 0.0022 18.8 0.0 3.6 4 0 0 4 4 4 2 WD domain, G-beta repeat F-box-like PF12937.7 RKO83305.1 - 0.0013 18.6 0.0 0.0029 17.4 0.0 1.6 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO83305.1 - 0.0021 17.9 0.2 0.01 15.7 0.0 2.1 2 0 0 2 2 2 1 F-box domain Nup160 PF11715.8 RKO83305.1 - 0.063 11.9 0.1 0.12 10.9 0.1 1.4 1 0 0 1 1 1 0 Nucleoporin Nup120/160 DNA_methylase PF00145.17 RKO83306.1 - 8.2e-16 58.3 0.0 8.1e-15 55.0 0.0 1.9 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase DUF445 PF04286.12 RKO83309.1 - 0.013 15.4 8.9 0.021 14.6 8.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF445) Prominin PF05478.11 RKO83309.1 - 0.47 8.3 12.5 0.97 7.3 12.5 1.4 1 1 0 1 1 1 0 Prominin DUF948 PF06103.11 RKO83309.1 - 0.73 10.1 3.6 2 8.7 2.9 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF1664 PF07889.12 RKO83309.1 - 3.5 7.7 10.5 3.6 7.7 5.8 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) OrfB_IS605 PF01385.19 RKO83309.1 - 7.2 6.9 10.1 15 5.8 2.6 3.0 2 2 1 3 3 3 0 Probable transposase zf-RING_2 PF13639.6 RKO83311.1 - 1.4e-12 47.7 4.9 3e-12 46.7 4.9 1.5 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 RKO83311.1 - 5.3e-09 36.2 2.1 1.3e-08 35.0 2.1 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 RKO83311.1 - 7.7e-09 35.3 4.1 7.7e-09 35.3 4.1 1.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 RKO83311.1 - 3.4e-08 33.1 4.7 3.4e-08 33.1 4.7 2.6 3 0 0 3 3 3 1 RING-like zinc finger zf-C3HC4 PF00097.25 RKO83311.1 - 4.9e-07 29.5 3.1 1e-06 28.5 3.1 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 RKO83311.1 - 8.6e-07 28.8 3.3 1.5e-06 28.1 3.3 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 RKO83311.1 - 6e-05 23.0 1.0 6e-05 23.0 1.0 2.9 3 0 0 3 3 3 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 RKO83311.1 - 0.00014 21.9 2.6 0.00023 21.1 2.6 1.5 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 RKO83311.1 - 0.00016 21.5 2.3 0.00028 20.7 2.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 RKO83311.1 - 0.00043 20.4 1.8 0.0014 18.7 1.8 1.9 1 1 1 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 RKO83311.1 - 0.0012 18.6 0.7 0.0027 17.5 0.7 1.6 1 1 0 1 1 1 1 RING/Ubox like zinc-binding domain Prok-RING_4 PF14447.6 RKO83311.1 - 0.019 14.8 6.6 0.019 14.8 6.6 1.9 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 RKO83311.1 - 0.026 14.1 5.0 0.026 14.1 5.0 1.8 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type RINGv PF12906.7 RKO83311.1 - 0.053 13.7 3.9 0.1 12.8 3.1 2.0 2 1 0 2 2 1 0 RING-variant domain Baculo_IE-1 PF05290.11 RKO83311.1 - 0.055 13.4 2.1 0.08 12.9 2.1 1.1 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) zf-RING-like PF08746.11 RKO83311.1 - 0.083 13.2 1.8 0.14 12.5 1.8 1.4 1 0 0 1 1 1 0 RING-like domain PHD PF00628.29 RKO83311.1 - 0.14 12.1 2.4 0.33 10.9 2.4 1.7 1 1 0 1 1 1 0 PHD-finger Prok-RING_1 PF14446.6 RKO83311.1 - 0.17 11.8 5.4 2.4 8.2 0.2 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 MRNIP PF15749.5 RKO83312.1 - 9.6e-15 55.2 0.0 1.7e-14 54.4 0.0 1.4 1 0 0 1 1 1 1 MRN-interacting protein Desulfoferrod_N PF06397.12 RKO83312.1 - 0.31 10.7 2.2 2.6 7.7 0.1 2.3 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain MDD_C PF18376.1 RKO83315.1 - 2.8e-50 170.7 0.0 3.2e-50 170.5 0.0 1.0 1 0 0 1 1 1 1 Mevalonate 5-diphosphate decarboxylase C-terminal domain eIF3_subunit PF08597.10 RKO83316.1 - 3e-41 141.9 21.2 3.4e-41 141.8 21.2 1.0 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit MCD PF05292.11 RKO83316.1 - 0.31 10.6 2.3 1 8.9 0.0 2.0 2 0 0 2 2 2 0 Malonyl-CoA decarboxylase C-terminal domain Cellulose_synt PF03552.14 RKO83316.1 - 0.36 9.3 1.8 0.39 9.2 1.8 1.1 1 0 0 1 1 1 0 Cellulose synthase DDRGK PF09756.9 RKO83316.1 - 0.63 9.6 12.3 1 8.9 12.3 1.4 1 0 0 1 1 1 0 DDRGK domain NPR3 PF03666.13 RKO83316.1 - 1.5 7.5 5.8 1.8 7.2 5.8 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Spore_coat_CotO PF14153.6 RKO83316.1 - 1.8 8.4 17.8 3.1 7.7 17.8 1.3 1 0 0 1 1 1 0 Spore coat protein CotO Presenilin PF01080.17 RKO83316.1 - 3.9 6.1 4.6 3.5 6.3 4.6 1.2 1 0 0 1 1 1 0 Presenilin HECT PF00632.25 RKO83317.1 - 1.4e-12 47.7 0.0 2.5e-12 46.9 0.0 1.4 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) TgMIC1 PF11476.8 RKO83319.1 - 0.095 12.4 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Toxoplasma gondii micronemal protein 1 TgMIC1 Flo11 PF10182.9 RKO83319.1 - 0.11 12.6 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Flo11 domain Pkinase PF00069.25 RKO83320.1 - 1.1e-58 198.7 0.0 2.7e-58 197.4 0.0 1.5 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO83320.1 - 2.8e-26 92.4 0.1 8e-26 90.9 0.1 1.6 1 1 0 1 1 1 1 Protein tyrosine kinase Thg1 PF04446.12 RKO83321.1 - 1.6e-33 115.4 0.0 2.6e-33 114.7 0.0 1.3 1 0 0 1 1 1 1 tRNAHis guanylyltransferase RFX_DNA_binding PF02257.15 RKO83322.1 - 0.041 14.5 0.1 0.066 13.8 0.1 1.3 1 0 0 1 1 1 0 RFX DNA-binding domain Iso_dh PF00180.20 RKO83323.1 - 3.6e-40 138.2 0.0 7.7e-40 137.1 0.0 1.5 1 1 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase SH3_1 PF00018.28 RKO83326.1 - 7.7e-09 35.0 0.0 2.3e-08 33.5 0.0 1.8 2 0 0 2 2 2 1 SH3 domain SH3_9 PF14604.6 RKO83326.1 - 3.1e-08 33.3 0.0 6.9e-08 32.2 0.0 1.6 1 0 0 1 1 1 1 Variant SH3 domain PAN_3 PF08277.12 RKO83326.1 - 7.4e-05 22.5 4.1 8.3e-05 22.3 0.7 2.3 2 0 0 2 2 2 1 PAN-like domain SH3_2 PF07653.17 RKO83326.1 - 0.0005 19.7 0.0 0.00086 18.9 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SOG2 PF10428.9 RKO83326.1 - 2.9 7.0 13.6 3.8 6.6 13.6 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein SPX PF03105.19 RKO83326.1 - 9.8 6.0 6.2 13 5.6 6.2 1.1 1 0 0 1 1 1 0 SPX domain Tup_N PF08581.10 RKO83327.1 - 0.00013 22.2 1.4 0.00026 21.2 0.0 2.1 2 0 0 2 2 2 1 Tup N-terminal Prp19 PF08606.11 RKO83327.1 - 0.033 14.2 0.0 0.088 12.8 0.0 1.6 1 0 0 1 1 1 0 Prp19/Pso4-like SOG2 PF10428.9 RKO83327.1 - 4.1 6.5 18.9 4.9 6.2 18.9 1.0 1 0 0 1 1 1 0 RAM signalling pathway protein PAT1 PF09770.9 RKO83327.1 - 7.3 4.7 22.3 9.1 4.4 22.3 1.1 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 F-box-like PF12937.7 RKO83328.1 - 8.9e-07 28.7 1.4 8.9e-07 28.7 1.4 2.8 3 1 0 3 3 3 1 F-box-like E1-E2_ATPase PF00122.20 RKO83329.1 - 3.1e-46 157.2 4.6 3.1e-46 157.2 4.6 1.8 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 RKO83329.1 - 3.4e-19 70.0 0.7 2e-17 64.2 0.2 2.6 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 RKO83329.1 - 2.5e-12 46.3 0.0 2.5e-12 46.3 0.0 2.4 3 0 0 3 3 3 1 Cation transporter/ATPase, N-terminus HAD PF12710.7 RKO83329.1 - 0.0094 16.4 0.0 0.02 15.3 0.0 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase ABC2_membrane_2 PF12679.7 RKO83329.1 - 0.016 14.5 5.0 0.13 11.5 3.8 2.3 2 0 0 2 2 2 0 ABC-2 family transporter protein Hydrolase_3 PF08282.12 RKO83329.1 - 0.016 14.9 0.8 1.3 8.7 0.1 2.3 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase DUF3278 PF11683.8 RKO83329.1 - 0.15 12.1 2.8 0.39 10.8 2.8 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3278) SLATT_4 PF18186.1 RKO83329.1 - 0.17 11.6 0.5 0.34 10.6 0.5 1.5 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 4 LMF1 PF06762.14 RKO83329.1 - 0.19 10.8 0.5 0.25 10.4 0.5 1.1 1 0 0 1 1 1 0 Lipase maturation factor Polysacc_deac_1 PF01522.21 RKO83330.1 - 1.6e-13 50.6 0.0 1.8e-13 50.5 0.0 1.0 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 RKO83330.1 - 0.0078 15.5 0.0 0.009 15.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 DUF2156 PF09924.9 RKO83330.1 - 0.13 11.3 0.0 0.13 11.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2156) RNB PF00773.19 RKO83334.1 - 7.6e-102 341.0 0.0 8.7e-102 340.8 0.0 1.0 1 0 0 1 1 1 1 RNB domain OB_Dis3 PF17849.1 RKO83334.1 - 3e-07 30.4 0.0 5.5e-07 29.5 0.0 1.5 1 0 0 1 1 1 1 Dis3-like cold-shock domain 2 (CSD2) Pkinase PF00069.25 RKO83335.1 - 0.034 13.5 0.0 0.047 13.0 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain Ras PF00071.22 RKO83336.1 - 2.7e-26 92.1 0.1 3e-26 92.0 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO83336.1 - 1.2e-20 73.9 0.1 1.3e-20 73.8 0.1 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO83336.1 - 1.2e-05 24.9 0.1 1.4e-05 24.6 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 RKO83336.1 - 4.8e-05 23.4 0.2 5.6e-05 23.2 0.2 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 RKO83336.1 - 0.0035 17.3 0.0 0.0035 17.3 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase PduV-EutP PF10662.9 RKO83336.1 - 0.0093 15.7 0.0 0.011 15.5 0.0 1.1 1 0 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation SRPRB PF09439.10 RKO83336.1 - 0.012 15.1 0.0 0.013 14.9 0.0 1.0 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_7 PF12775.7 RKO83336.1 - 0.012 15.1 0.0 0.012 15.1 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_22 PF13401.6 RKO83336.1 - 0.012 15.8 0.0 0.013 15.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 RKO83336.1 - 0.013 15.2 0.0 0.016 14.9 0.0 1.2 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 RKO83336.1 - 0.016 15.6 0.0 0.016 15.6 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 RKO83336.1 - 0.026 15.0 0.0 0.028 14.9 0.0 1.2 1 0 0 1 1 1 0 ABC transporter TniB PF05621.11 RKO83336.1 - 0.026 13.9 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein MCM PF00493.23 RKO83336.1 - 0.035 13.2 0.0 0.035 13.2 0.0 1.1 1 0 0 1 1 1 0 MCM P-loop domain Ploopntkinase3 PF18751.1 RKO83336.1 - 0.047 13.6 0.0 0.056 13.4 0.0 1.1 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_21 PF13304.6 RKO83336.1 - 0.05 13.4 0.1 0.05 13.4 0.1 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system FeoB_N PF02421.18 RKO83336.1 - 0.057 13.0 0.0 0.059 12.9 0.0 1.0 1 0 0 1 1 1 0 Ferrous iron transport protein B AAA_5 PF07728.14 RKO83336.1 - 0.068 13.2 0.0 0.069 13.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_29 PF13555.6 RKO83336.1 - 0.08 12.7 0.3 0.14 11.9 0.3 1.5 1 1 0 1 1 1 0 P-loop containing region of AAA domain Septin PF00735.18 RKO83336.1 - 0.12 11.7 0.1 0.15 11.4 0.1 1.1 1 0 0 1 1 1 0 Septin Gtr1_RagA PF04670.12 RKO83336.1 - 0.13 11.6 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region THF_DHG_CYH_C PF02882.19 RKO83338.1 - 1.4e-47 161.0 0.8 2.1e-47 160.4 0.8 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 RKO83338.1 - 1.9e-35 121.6 0.0 3.2e-35 120.9 0.0 1.4 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain OCD_Mu_crystall PF02423.15 RKO83338.1 - 0.0025 16.8 1.0 0.0035 16.3 1.0 1.2 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family AlaDh_PNT_C PF01262.21 RKO83338.1 - 0.0031 16.8 0.5 0.0052 16.1 0.5 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain AdoHcyase_NAD PF00670.21 RKO83338.1 - 0.011 15.8 0.7 0.71 9.9 0.7 2.4 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EGF_2 PF07974.13 RKO83341.1 - 0.00025 21.3 8.9 0.00048 20.4 8.9 1.5 1 0 0 1 1 1 1 EGF-like domain EGF_Tenascin PF18720.1 RKO83341.1 - 0.012 15.7 9.8 0.025 14.6 9.8 1.6 1 0 0 1 1 1 0 Tenascin EGF domain hEGF PF12661.7 RKO83341.1 - 0.014 16.0 6.0 0.014 16.0 6.0 2.0 2 0 0 2 2 2 0 Human growth factor-like EGF I-EGF_1 PF18372.1 RKO83341.1 - 0.031 14.4 3.9 0.066 13.3 3.9 1.5 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 EGF PF00008.27 RKO83341.1 - 0.064 13.6 7.2 0.18 12.1 7.2 1.7 1 0 0 1 1 1 0 EGF-like domain EB PF01683.18 RKO83341.1 - 0.24 11.7 2.7 0.49 10.7 2.7 1.4 1 0 0 1 1 1 0 EB module DUF4097 PF13349.6 RKO83342.1 - 9.4e-07 28.4 5.5 1.3e-06 28.0 5.5 1.2 1 0 0 1 1 1 1 Putative adhesin NatB_MDM20 PF09797.9 RKO83343.1 - 1.2e-83 281.3 0.0 1.5e-83 280.9 0.0 1.0 1 0 0 1 1 1 1 N-acetyltransferase B complex (NatB) non catalytic subunit Pkinase PF00069.25 RKO83345.1 - 6.5e-41 140.4 0.0 7.6e-41 140.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO83345.1 - 5e-26 91.5 0.0 6.1e-26 91.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO83345.1 - 0.0036 16.2 0.0 0.0042 15.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 RKO83345.1 - 0.17 11.2 0.0 0.21 10.9 0.0 1.2 1 0 0 1 1 1 0 Kinase-like RGS PF00615.19 RKO83349.1 - 7.2e-09 36.0 1.0 5.2e-08 33.2 1.0 2.0 1 1 0 1 1 1 1 Regulator of G protein signaling domain CortBP2 PF09727.9 RKO83352.1 - 0.0084 16.0 9.4 0.0093 15.9 9.2 1.3 1 1 0 1 1 1 1 Cortactin-binding protein-2 UPF0242 PF06785.11 RKO83352.1 - 0.092 12.8 6.9 0.1 12.7 6.9 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus OmpH PF03938.14 RKO83352.1 - 0.094 13.0 10.4 0.11 12.8 10.4 1.0 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF4407 PF14362.6 RKO83352.1 - 1.1 8.5 7.9 1.4 8.2 7.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SH3_1 PF00018.28 RKO83353.1 - 4.7e-06 26.1 0.0 9.2e-06 25.2 0.0 1.5 1 0 0 1 1 1 1 SH3 domain Kelch_3 PF13415.6 RKO83353.1 - 0.00022 21.4 15.1 0.0054 17.0 0.0 6.0 7 0 0 7 7 7 2 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO83353.1 - 0.0043 17.3 12.7 3.3 8.1 0.2 5.4 5 1 0 5 5 5 3 Kelch motif SH3_9 PF14604.6 RKO83353.1 - 0.0076 16.1 0.0 0.016 15.1 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain UCH PF00443.29 RKO83354.1 - 2.7e-12 46.7 0.4 2.9e-12 46.6 0.4 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Pkinase_Tyr PF07714.17 RKO83355.1 - 3.6e-06 26.5 0.0 5.3e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase ADK PF00406.22 RKO83356.1 - 5.6e-48 162.9 0.0 6.8e-48 162.6 0.0 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 RKO83356.1 - 4.4e-20 72.5 0.0 5.4e-20 72.2 0.0 1.0 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 RKO83356.1 - 0.0027 17.9 0.0 0.0034 17.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 RKO83356.1 - 0.012 16.1 0.0 0.018 15.6 0.0 1.3 1 1 0 1 1 1 0 AAA domain Hydin_ADK PF17213.3 RKO83356.1 - 0.016 15.5 0.6 4.6 7.5 0.1 2.2 1 1 1 2 2 2 0 Hydin Adenylate kinase-like domain AAA_30 PF13604.6 RKO83356.1 - 0.022 14.5 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 RKO83356.1 - 0.026 14.2 0.0 0.027 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 RKO83356.1 - 0.055 13.1 0.7 1.6 8.3 0.0 2.2 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Thymidylate_kin PF02223.17 RKO83356.1 - 0.082 12.6 0.0 0.27 10.9 0.0 1.7 2 0 0 2 2 2 0 Thymidylate kinase WD40 PF00400.32 RKO83357.1 - 0.0039 18.0 0.2 0.083 13.8 0.6 2.5 2 0 0 2 2 2 1 WD domain, G-beta repeat SNAP PF14938.6 RKO83358.1 - 2e-12 47.2 0.4 4.6e-12 46.0 0.4 1.6 1 1 0 1 1 1 1 Soluble NSF attachment protein, SNAP TPR_16 PF13432.6 RKO83358.1 - 0.0094 16.6 1.2 0.13 12.9 0.6 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO83358.1 - 0.022 15.6 3.1 0.25 12.3 0.4 3.3 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 RKO83358.1 - 0.033 14.3 1.1 0.64 10.3 0.2 3.1 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_12 PF13424.6 RKO83358.1 - 0.064 13.6 2.2 0.84 10.0 0.3 3.0 2 1 0 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 RKO83358.1 - 0.1 13.1 3.2 14 6.3 0.1 3.6 3 1 1 4 4 4 0 Tetratricopeptide repeat NSF PF02071.20 RKO83358.1 - 1.2 10.2 3.2 29 6.0 0.1 3.2 2 0 0 2 2 2 0 Aromatic-di-Alanine (AdAR) repeat zf-RING_2 PF13639.6 RKO83361.1 - 0.011 16.0 0.9 0.025 14.9 0.9 1.6 1 0 0 1 1 1 0 Ring finger domain zf-RING_11 PF17123.5 RKO83361.1 - 0.016 15.0 0.6 0.031 14.0 0.6 1.5 1 0 0 1 1 1 0 RING-like zinc finger zf-RING_5 PF14634.6 RKO83361.1 - 0.073 13.0 0.1 0.16 12.0 0.1 1.6 1 0 0 1 1 1 0 zinc-RING finger domain Apolipoprotein PF01442.18 RKO83362.1 - 3.5e-05 23.7 2.3 5.7e-05 23.1 2.3 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain DUF883 PF05957.13 RKO83362.1 - 0.002 18.7 10.9 0.089 13.4 1.0 2.2 1 1 1 2 2 2 2 Bacterial protein of unknown function (DUF883) YtxH PF12732.7 RKO83362.1 - 0.19 12.3 14.0 0.063 13.8 4.6 2.4 1 1 1 2 2 2 0 YtxH-like protein ATP-synt_B PF00430.18 RKO83362.1 - 5.3 7.1 12.8 3.9 7.6 1.1 2.0 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) RskA PF10099.9 RKO83367.1 - 0.33 11.2 5.6 0.57 10.4 5.6 1.3 1 0 0 1 1 1 0 Anti-sigma-K factor rskA GST_C PF00043.25 RKO83369.1 - 8.3e-17 61.2 0.0 9.6e-17 61.0 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 RKO83369.1 - 2e-11 43.7 0.2 2.7e-11 43.3 0.2 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 RKO83369.1 - 1.2e-09 38.2 0.0 1.4e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_5 PF16865.5 RKO83369.1 - 0.035 14.7 0.0 0.041 14.5 0.0 1.2 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 RKO83369.1 - 0.038 13.8 0.0 0.085 12.7 0.0 1.6 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Piwi PF02171.17 RKO83370.1 - 2.5e-85 286.4 0.0 2.7e-85 286.2 0.0 1.0 1 0 0 1 1 1 1 Piwi domain Pkinase PF00069.25 RKO83372.1 - 8.7e-68 228.5 0.0 1.1e-67 228.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO83372.1 - 5e-29 101.4 0.0 6.2e-29 101.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO83372.1 - 4.1e-08 32.9 0.0 6.6e-08 32.2 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 RKO83372.1 - 0.00043 19.2 0.0 0.00081 18.3 0.0 1.4 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 RKO83372.1 - 0.0011 18.3 0.0 0.0018 17.7 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 RKO83372.1 - 0.15 11.0 0.0 0.2 10.5 0.0 1.3 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 RKO83372.1 - 0.2 11.6 0.0 0.34 10.8 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family UTP15_C PF09384.10 RKO83374.1 - 3.1e-32 111.3 0.2 4.9e-32 110.6 0.2 1.3 1 0 0 1 1 1 1 UTP15 C terminal WD40 PF00400.32 RKO83374.1 - 2.1e-26 91.6 11.6 3.5e-08 34.0 0.1 6.5 6 1 0 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO83374.1 - 1.4e-08 34.9 0.2 0.42 10.9 0.0 4.8 2 2 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO83374.1 - 2.2e-06 26.6 0.5 0.13 10.8 0.1 3.2 2 1 1 3 3 3 3 Nucleoporin Nup120/160 WD40_like PF17005.5 RKO83374.1 - 0.0096 15.3 0.1 0.15 11.3 0.0 2.7 3 1 0 3 3 3 1 WD40-like domain TFIID_30kDa PF03540.13 RKO83375.1 - 2e-26 91.7 0.1 3.3e-26 91.0 0.1 1.4 1 0 0 1 1 1 1 Transcription initiation factor TFIID 23-30kDa subunit Mito_carr PF00153.27 RKO83377.1 - 0.11 12.4 0.0 0.51 10.3 0.0 2.0 2 0 0 2 2 2 0 Mitochondrial carrier protein WGR PF05406.15 RKO83378.1 - 2.2e-22 78.9 0.2 2.2e-22 78.9 0.2 1.7 2 0 0 2 2 2 1 WGR domain PBP1_TM PF14812.6 RKO83378.1 - 0.02 15.2 0.1 0.039 14.3 0.1 1.4 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF4813 PF16072.5 RKO83378.1 - 1.2 8.7 12.4 1.7 8.3 12.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4813) ABC1 PF03109.16 RKO83381.1 - 1.2e-23 83.6 0.0 9.7e-23 80.6 0.0 2.1 2 0 0 2 2 2 1 ABC1 family RIO1 PF01163.22 RKO83381.1 - 0.091 12.3 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 RIO1 family WD40 PF00400.32 RKO83383.1 - 8.7e-15 54.9 7.9 0.00026 21.7 0.8 6.0 6 0 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO83383.1 - 7.3e-07 29.4 0.0 0.27 11.6 0.0 3.6 3 1 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO83383.1 - 0.00015 20.6 0.0 0.0038 15.9 0.0 2.1 2 0 0 2 2 2 1 Nucleoporin Nup120/160 Cytochrom_D1 PF02239.16 RKO83383.1 - 0.087 11.3 0.2 0.19 10.2 0.1 1.6 2 0 0 2 2 2 0 Cytochrome D1 heme domain Cation_ATPase_N PF00690.26 RKO83385.1 - 7.5e-06 25.6 0.0 1.4e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus CAMSAP_CKK PF08683.11 RKO83385.1 - 0.0043 17.2 0.1 0.0066 16.6 0.1 1.3 1 0 0 1 1 1 1 Microtubule-binding calmodulin-regulated spectrin-associated DUF4231 PF14015.6 RKO83385.1 - 0.025 15.1 0.0 0.035 14.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) ANF_receptor PF01094.28 RKO83386.1 - 2.1e-10 40.2 0.0 2.3e-10 40.1 0.0 1.0 1 0 0 1 1 1 1 Receptor family ligand binding region ANF_receptor PF01094.28 RKO83387.1 - 6.1e-08 32.2 0.0 8.6e-08 31.7 0.0 1.2 1 0 0 1 1 1 1 Receptor family ligand binding region GPCR_chapero_1 PF11904.8 RKO83388.1 - 9.6e-30 104.1 0.5 1.2e-29 103.7 0.5 1.1 1 0 0 1 1 1 1 GPCR-chaperone Ank_2 PF12796.7 RKO83388.1 - 5.7e-05 23.6 0.0 9.7e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO83388.1 - 0.0023 18.3 0.0 2.1 9.2 0.0 3.2 3 0 0 3 3 3 1 Ankyrin repeat Ank_5 PF13857.6 RKO83388.1 - 0.0025 18.1 0.0 0.007 16.7 0.0 1.8 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO83388.1 - 0.0087 16.6 0.0 0.62 10.7 0.0 2.5 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Myc_N PF01056.18 RKO83388.1 - 0.07 13.0 2.2 0.096 12.6 2.2 1.2 1 0 0 1 1 1 0 Myc amino-terminal region Ank PF00023.30 RKO83388.1 - 0.079 13.4 2.3 0.094 13.2 0.1 2.1 2 0 0 2 2 2 0 Ankyrin repeat Glyco_hydro_52 PF03512.13 RKO83388.1 - 0.22 10.4 0.7 0.31 10.0 0.7 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 52 Atrophin-1 PF03154.15 RKO83388.1 - 8.3 4.6 7.8 12 4.0 7.8 1.1 1 0 0 1 1 1 0 Atrophin-1 family MTHFR PF02219.17 RKO83390.1 - 3.1e-16 59.5 0.0 3.7e-16 59.3 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase Glyco_hydro_71 PF03659.14 RKO83390.1 - 0.16 10.8 0.0 0.19 10.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 71 G-patch PF01585.23 RKO83391.1 - 3e-13 49.4 2.9 5.9e-13 48.5 2.9 1.5 1 0 0 1 1 1 1 G-patch domain Agenet PF05641.12 RKO83391.1 - 0.0091 16.5 0.1 0.02 15.4 0.1 1.5 1 0 0 1 1 1 1 Agenet domain Prefoldin_3 PF13758.6 RKO83391.1 - 0.012 15.7 0.1 0.02 14.9 0.1 1.3 1 0 0 1 1 1 0 Prefoldin subunit FlxA PF14282.6 RKO83391.1 - 0.11 12.5 1.1 0.19 11.7 1.1 1.3 1 0 0 1 1 1 0 FlxA-like protein F-box-like PF12937.7 RKO83392.1 - 0.034 14.0 0.2 0.11 12.5 0.2 1.8 1 0 0 1 1 1 0 F-box-like Ribosomal_L14 PF00238.19 RKO83395.1 - 1.5e-34 118.7 0.0 1.8e-34 118.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Polysacc_deac_1 PF01522.21 RKO83397.1 - 4.7e-28 97.6 0.0 6.1e-28 97.2 0.0 1.0 1 0 0 1 1 1 1 Polysaccharide deacetylase SBDS_C PF09377.10 RKO83399.1 - 6.2e-37 126.2 0.4 9.5e-37 125.6 0.4 1.3 1 0 0 1 1 1 1 SBDS protein C-terminal domain SBDS PF01172.18 RKO83399.1 - 3.6e-18 65.4 0.6 1.5e-17 63.4 0.3 2.0 2 1 0 2 2 2 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein FAM176 PF14851.6 RKO83399.1 - 0.0047 16.6 0.1 0.012 15.2 0.0 1.7 2 0 0 2 2 2 1 FAM176 family Glyco_trans_1_4 PF13692.6 RKO83400.1 - 1.3e-09 38.5 0.0 1.9e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.20 RKO83400.1 - 1.4e-07 31.2 0.0 2e-07 30.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 RKO83400.1 - 0.0051 17.2 0.0 0.02 15.3 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 adh_short PF00106.25 RKO83401.1 - 5.4e-27 94.5 0.3 6.5e-27 94.3 0.3 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO83401.1 - 4.5e-20 72.2 0.2 5e-20 72.1 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 RKO83401.1 - 2.3e-08 34.1 0.2 2.9e-08 33.8 0.2 1.1 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 RKO83401.1 - 0.00059 19.8 0.7 0.00072 19.5 0.7 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 RKO83401.1 - 0.003 17.1 0.1 0.0034 16.9 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 RKO83401.1 - 0.027 13.7 0.5 0.092 11.9 0.5 1.8 1 1 0 1 1 1 0 Male sterility protein DUF1776 PF08643.10 RKO83401.1 - 0.13 11.6 0.0 0.19 11.1 0.0 1.1 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Parvo_NS1 PF01057.17 RKO83401.1 - 0.18 10.9 0.0 0.23 10.5 0.0 1.1 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 adh_short PF00106.25 RKO83402.1 - 8e-13 48.3 0.0 9.9e-13 48.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO83402.1 - 1.8e-09 37.5 0.1 2.1e-09 37.3 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF1776 PF08643.10 RKO83402.1 - 0.012 15.0 0.0 0.013 14.9 0.0 1.1 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) FapA PF03961.13 RKO83403.1 - 0.21 10.2 25.5 0.55 8.8 4.7 3.4 2 1 1 3 3 3 0 Flagellar Assembly Protein A tRNA-synt_1b PF00579.25 RKO83405.1 - 3.4e-66 223.6 0.0 4.1e-66 223.3 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) GED PF02212.18 RKO83406.1 - 1.7e-05 24.9 0.0 2.6e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Dynamin GTPase effector domain DWNN PF08783.11 RKO83406.1 - 0.028 14.7 0.0 0.057 13.7 0.0 1.5 1 0 0 1 1 1 0 DWNN domain NAD_binding_6 PF08030.12 RKO83408.1 - 1.4e-19 70.8 0.0 1.9e-19 70.3 0.0 1.2 1 0 0 1 1 1 1 Ferric reductase NAD binding domain UDPG_MGDP_dh PF00984.19 RKO83408.1 - 0.072 13.3 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, central domain KR PF08659.10 RKO83409.1 - 0.00078 19.4 0.1 0.0012 18.8 0.1 1.3 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 RKO83409.1 - 0.022 14.7 0.5 0.26 11.2 0.2 2.5 2 1 0 2 2 2 0 NAD(P)H-binding Sacchrp_dh_NADP PF03435.18 RKO83409.1 - 0.041 14.1 0.1 0.066 13.5 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain VirE PF05272.11 RKO83409.1 - 0.14 11.9 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Virulence-associated protein E LD_cluster3 PF18180.1 RKO83409.1 - 0.15 11.6 0.0 0.3 10.7 0.0 1.5 1 1 1 2 2 2 0 SLOG cluster3 family RRM_1 PF00076.22 RKO83410.1 - 1.6e-24 85.5 0.0 2.6e-14 52.8 0.0 2.4 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 RKO83410.1 - 1.1e-09 38.0 0.0 0.00023 20.9 0.0 2.2 2 0 0 2 2 2 2 Occluded RNA-recognition motif RRM_5 PF13893.6 RKO83410.1 - 2.7e-07 30.2 0.0 0.0012 18.5 0.0 2.1 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RL10P_insert PF17777.1 RKO83411.1 - 0.14 12.2 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 RKO83411.1 - 0.27 11.8 11.8 0.055 14.1 5.3 2.2 2 0 0 2 2 2 0 60s Acidic ribosomal protein TTL PF03133.15 RKO83413.1 - 5.7e-21 74.9 0.0 9.8e-21 74.1 0.0 1.4 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 RKO83413.1 - 0.0038 16.5 0.0 0.01 15.1 0.0 1.7 1 0 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 RKO83413.1 - 0.063 12.5 0.0 0.1 11.9 0.0 1.2 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp SPT6_acidic PF14632.6 RKO83413.1 - 0.083 13.5 1.1 0.21 12.2 1.1 1.6 1 0 0 1 1 1 0 Acidic N-terminal SPT6 Sporozoite_P67 PF05642.11 RKO83413.1 - 0.088 10.9 9.7 0.11 10.6 9.7 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen GCR1_C PF12550.8 RKO83415.1 - 2.5e-18 66.2 1.4 4.1e-18 65.5 1.4 1.3 1 0 0 1 1 1 1 Transcriptional activator of glycolytic enzymes DUF1180 PF06679.12 RKO83416.1 - 1.9 8.9 8.0 0.15 12.5 1.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1180) Usp PF00582.26 RKO83420.1 - 3.6e-17 63.2 0.2 4.3e-17 62.9 0.2 1.1 1 0 0 1 1 1 1 Universal stress protein family LEA_3 PF03242.13 RKO83421.1 - 1.3 9.7 5.2 0.19 12.5 0.7 1.9 2 0 0 2 2 2 0 Late embryogenesis abundant protein LMBR1 PF04791.16 RKO83422.1 - 1.6e-55 189.0 21.3 1e-35 123.7 5.8 3.0 1 1 1 2 2 2 2 LMBR1-like membrane protein RRM_1 PF00076.22 RKO83424.1 - 0.00057 19.6 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ThiF PF00899.21 RKO83426.1 - 1.4e-10 40.9 0.0 2e-10 40.4 0.0 1.2 1 0 0 1 1 1 1 ThiF family ABC_tran PF00005.27 RKO83428.1 - 5.8e-08 33.3 0.0 6.5e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 RKO83429.1 - 2.9e-31 109.1 5.5 3.9e-31 108.7 5.5 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region Ank_2 PF12796.7 RKO83431.1 - 1.3e-08 35.2 0.3 4.3e-08 33.6 0.1 1.7 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO83431.1 - 3.4e-08 33.1 0.4 7.7e-07 29.0 0.1 2.6 3 0 0 3 3 3 1 Ankyrin repeat Ank PF00023.30 RKO83431.1 - 1.8e-07 31.3 1.0 1.3e-05 25.4 0.0 2.8 3 0 0 3 3 3 1 Ankyrin repeat Ank_5 PF13857.6 RKO83431.1 - 8.2e-07 29.2 0.6 1.2e-06 28.7 0.4 1.5 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO83431.1 - 1e-06 29.2 0.1 2.5e-06 27.9 0.1 1.7 2 0 0 2 2 2 1 Ankyrin repeats (many copies) DUF4920 PF16267.5 RKO83432.1 - 0.031 14.3 0.1 0.11 12.4 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4920) DDHD PF02862.17 RKO83432.1 - 0.28 11.3 7.9 1.2 9.2 1.9 2.2 2 0 0 2 2 2 0 DDHD domain DUF719 PF05334.13 RKO83432.1 - 0.76 9.9 14.2 0.13 12.4 1.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF719) eIF3_subunit PF08597.10 RKO83432.1 - 2.1 8.2 33.6 2.9 7.7 15.5 2.3 2 0 0 2 2 2 0 Translation initiation factor eIF3 subunit Caldesmon PF02029.15 RKO83432.1 - 3.2 6.4 41.3 5.8 5.6 41.3 1.4 1 1 0 1 1 1 0 Caldesmon DUF262 PF03235.14 RKO83432.1 - 5.3 7.1 7.4 21 5.2 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function DUF262 Pinin_SDK_memA PF04696.13 RKO83432.1 - 7.6 6.6 42.9 0.38 10.8 14.6 2.3 2 0 0 2 2 2 0 pinin/SDK/memA/ protein conserved region PRC2_HTH_1 PF18118.1 RKO83432.1 - 10 7.0 15.8 14 6.6 3.5 2.6 2 0 0 2 2 2 0 Polycomb repressive complex 2 tri-helical domain DUF3461 PF11944.8 RKO83433.1 - 0.059 13.5 0.0 0.062 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3461) DDE_Tnp_4 PF13359.6 RKO83433.1 - 0.11 12.1 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 DDE superfamily endonuclease PhoD_N PF16655.5 RKO83435.1 - 2.4e-05 24.8 0.0 4.1e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 PhoD-like phosphatase, N-terminal domain Pur_ac_phosph_N PF16656.5 RKO83435.1 - 4.6e-05 23.9 0.0 7.8e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Purple acid Phosphatase, N-terminal domain PhoD PF09423.10 RKO83435.1 - 0.11 11.5 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 PhoD-like phosphatase fn3 PF00041.21 RKO83435.1 - 0.13 12.6 0.0 0.23 11.8 0.0 1.4 1 0 0 1 1 1 0 Fibronectin type III domain Ada3 PF10198.9 RKO83436.1 - 7.3e-28 97.3 2.6 9.7e-28 96.9 2.6 1.2 1 0 0 1 1 1 1 Histone acetyltransferases subunit 3 Hydantoinase_B PF02538.14 RKO83436.1 - 0.097 11.1 0.3 0.12 10.8 0.3 1.1 1 0 0 1 1 1 0 Hydantoinase B/oxoprolinase RHD3 PF05879.12 RKO83437.1 - 0.00041 18.6 0.3 0.00064 18.0 0.3 1.3 1 0 0 1 1 1 1 Root hair defective 3 GTP-binding protein (RHD3) tRNA_SAD PF07973.14 RKO83437.1 - 0.0059 16.7 0.0 0.018 15.1 0.0 1.8 2 0 0 2 2 2 1 Threonyl and Alanyl tRNA synthetase second additional domain ChapFlgA_N PF17656.1 RKO83437.1 - 0.032 14.4 0.0 0.069 13.3 0.0 1.5 1 0 0 1 1 1 0 FlgA N-terminal domain RHD3 PF05879.12 RKO83440.1 - 1.3e-08 33.6 0.0 1.4e-05 23.5 0.0 2.0 2 0 0 2 2 2 2 Root hair defective 3 GTP-binding protein (RHD3) HALZ PF02183.18 RKO83441.1 - 0.00023 21.3 3.2 0.11 12.7 0.2 2.8 1 1 1 2 2 2 2 Homeobox associated leucine zipper SHE3 PF17078.5 RKO83441.1 - 0.019 14.7 0.8 0.022 14.5 0.8 1.0 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 DUF1640 PF07798.11 RKO83441.1 - 0.058 13.4 0.4 0.072 13.1 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) DUF4051 PF13260.6 RKO83441.1 - 0.34 10.7 4.2 7.5 6.4 0.7 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF4051) Fungal_trans PF04082.18 RKO83442.1 - 9.2e-24 83.9 0.8 1.6e-23 83.1 0.8 1.4 1 0 0 1 1 1 1 Fungal specific transcription factor domain Zn_clus PF00172.18 RKO83442.1 - 0.00018 21.6 4.2 0.0004 20.5 4.2 1.5 1 0 0 1 1 1 1 Fungal Zn(2)-Cys(6) binuclear cluster domain Pox_Ag35 PF03286.14 RKO83442.1 - 0.1 12.4 2.7 0.2 11.4 2.7 1.5 1 0 0 1 1 1 0 Pox virus Ag35 surface protein PBP1_TM PF14812.6 RKO83442.1 - 0.45 10.9 7.0 0.13 12.6 3.1 2.0 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal B12D PF06522.11 RKO83443.1 - 1.2e-10 41.0 0.0 1.2e-10 41.0 0.0 1.0 1 0 0 1 1 1 1 NADH-ubiquinone reductase complex 1 MLRQ subunit Glyco_hydro_28 PF00295.17 RKO83444.1 - 4.2e-06 26.0 0.0 5e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 Pectate_lyase_3 PF12708.7 RKO83444.1 - 6.6e-05 22.9 0.0 0.00011 22.1 0.0 1.4 2 0 0 2 2 2 1 Pectate lyase superfamily protein p450 PF00067.22 RKO83449.1 - 1.2e-26 93.5 0.0 1.5e-26 93.2 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 HEAT PF02985.22 RKO83450.1 - 5.4e-10 38.7 5.9 0.084 13.2 0.0 7.1 7 0 0 7 7 7 3 HEAT repeat HEAT_2 PF13646.6 RKO83450.1 - 4e-05 23.9 15.4 0.023 15.1 0.2 5.5 3 2 2 6 6 6 2 HEAT repeats Cnd1 PF12717.7 RKO83450.1 - 0.0072 16.4 0.2 1.6 8.8 0.0 3.9 4 1 1 5 5 5 1 non-SMC mitotic condensation complex subunit 1 DRIM PF07539.12 RKO83450.1 - 0.013 13.8 0.0 1.8 6.8 0.0 2.1 2 0 0 2 2 2 0 Down-regulated in metastasis Adaptin_N PF01602.20 RKO83450.1 - 0.029 12.9 0.1 0.3 9.6 0.0 2.4 2 1 0 2 2 2 0 Adaptin N terminal region CLASP_N PF12348.8 RKO83450.1 - 0.18 11.4 0.1 17 4.9 0.1 3.4 3 2 1 4 4 4 0 CLASP N terminal HEAT_EZ PF13513.6 RKO83450.1 - 2.3 8.8 16.4 16 6.1 0.0 6.6 8 1 1 9 9 9 0 HEAT-like repeat Exo_endo_phos PF03372.23 RKO83452.1 - 0.006 16.1 0.0 0.0099 15.4 0.0 1.3 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family zf-HC5HC2H_2 PF13832.6 RKO83453.1 - 1.3e-12 47.9 18.1 1.5e-12 47.6 4.7 4.0 3 2 0 3 3 3 1 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 RKO83453.1 - 0.00023 21.3 21.8 0.00024 21.3 4.9 3.9 3 1 1 4 4 4 2 PHD-like zinc-binding domain PHD PF00628.29 RKO83453.1 - 0.015 15.1 19.9 0.032 14.1 2.6 3.9 4 0 0 4 4 4 0 PHD-finger PHD_4 PF16866.5 RKO83453.1 - 0.71 10.0 9.2 0.55 10.4 3.4 2.7 2 0 0 2 2 2 0 PHD-finger PPR_2 PF13041.6 RKO83456.1 - 7.3e-20 70.9 0.6 0.0068 16.6 0.0 8.6 6 2 3 9 9 9 6 PPR repeat family PPR PF01535.20 RKO83456.1 - 6.7e-11 41.7 8.5 0.002 18.2 0.0 8.2 10 0 0 10 10 10 2 PPR repeat PPR_1 PF12854.7 RKO83456.1 - 1.9e-08 33.8 10.2 0.0031 17.2 0.0 6.2 6 0 0 6 6 6 2 PPR repeat PPR_3 PF13812.6 RKO83456.1 - 1.7e-06 28.0 0.0 0.063 13.4 0.0 4.4 4 0 0 4 4 4 1 Pentatricopeptide repeat domain PPR_long PF17177.4 RKO83456.1 - 0.00029 20.3 0.4 0.39 10.1 0.2 3.1 3 1 1 4 4 4 2 Pentacotripeptide-repeat region of PRORP TPR_19 PF14559.6 RKO83456.1 - 0.0085 16.6 4.5 0.57 10.7 0.1 3.8 3 2 1 4 4 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO83456.1 - 0.029 15.2 11.6 6.1 8.0 0.1 6.1 5 1 1 6 6 6 0 Tetratricopeptide repeat TPR_4 PF07721.14 RKO83456.1 - 4 8.3 11.7 21 6.1 0.3 4.9 5 0 0 5 5 5 0 Tetratricopeptide repeat COX2 PF00116.20 RKO83459.1 - 3.5e-28 97.9 0.2 5.2e-28 97.3 0.2 1.3 1 1 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain Cyt-b5 PF00173.28 RKO83460.1 - 1.7e-06 28.1 0.1 3.4e-06 27.1 0.1 1.5 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Cytochrom_B561 PF03188.16 RKO83460.1 - 0.00051 20.2 0.4 0.0012 19.0 0.4 1.5 1 0 0 1 1 1 1 Eukaryotic cytochrome b561 XRN_M PF17846.1 RKO83461.1 - 8.7e-65 219.4 5.5 9.5e-65 219.3 5.5 1.0 1 0 0 1 1 1 1 Xrn1 helical domain Mob1_phocein PF03637.17 RKO83462.1 - 5.3e-31 107.9 1.7 6.7e-31 107.6 1.7 1.0 1 0 0 1 1 1 1 Mob1/phocein family Pkinase PF00069.25 RKO83463.1 - 1.9e-16 60.2 0.0 7.4e-09 35.4 0.0 2.1 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 RKO83463.1 - 6.4e-10 38.7 0.0 3.6e-06 26.4 0.0 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase Phage_integrase PF00589.22 RKO83464.1 - 0.00022 21.1 0.0 0.0011 18.8 0.0 2.1 1 1 0 1 1 1 1 Phage integrase family Auto_anti-p27 PF06677.12 RKO83464.1 - 0.00047 20.3 0.1 0.0012 18.9 0.1 1.8 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) GMP_PDE_delta PF05351.11 RKO83466.1 - 3.7e-51 173.3 0.2 4e-51 173.2 0.2 1.0 1 0 0 1 1 1 1 GMP-PDE, delta subunit Ribosomal_60s PF00428.19 RKO83467.1 - 6.8 7.4 8.0 29 5.3 8.0 2.0 2 0 0 2 2 2 0 60s Acidic ribosomal protein zf-C2H2_aberr PF17017.5 RKO83469.1 - 0.00042 20.5 0.3 0.00064 19.9 0.3 1.1 1 0 0 1 1 1 1 Aberrant zinc-finger DUF4407 PF14362.6 RKO83469.1 - 1.3 8.3 4.4 2.1 7.7 4.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CBS PF00571.28 RKO83470.1 - 1e-16 61.1 0.8 2.3e-08 34.4 0.0 3.7 3 1 0 3 3 3 3 CBS domain GDA1_CD39 PF01150.17 RKO83473.1 - 6.9e-41 140.3 0.0 1e-19 70.5 0.0 2.0 1 1 1 2 2 2 2 GDA1/CD39 (nucleoside phosphatase) family ACOX PF01756.19 RKO83474.1 - 9.7e-21 74.1 0.0 4.7e-20 71.9 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA oxidase Acyl-CoA_dh_M PF02770.19 RKO83474.1 - 2.9e-09 37.0 0.0 5.5e-09 36.1 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 RKO83474.1 - 4.2e-09 36.8 0.1 4.3e-08 33.5 0.1 2.3 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Fimbrial_PilY2 PF14481.6 RKO83474.1 - 0.013 15.1 0.0 0.033 13.8 0.0 1.6 1 0 0 1 1 1 0 Type 4 fimbrial biogenesis protein PilY2 PGM_PMM_III PF02880.16 RKO83475.1 - 2.7e-10 40.4 0.0 5.5e-10 39.4 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 RKO83476.1 - 1.8e-07 31.2 0.0 2.7e-07 30.7 0.0 1.4 1 1 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain B1 PF02246.15 RKO83476.1 - 0.062 13.3 1.6 0.072 13.1 0.9 1.6 1 1 0 1 1 1 0 Protein L b1 domain RCC1 PF00415.18 RKO83478.1 - 9e-08 32.6 9.6 9.4e-07 29.4 3.5 3.4 3 1 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 RKO83478.1 - 0.017 14.9 15.8 0.019 14.8 0.5 3.5 3 1 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat RPA_interact_C PF14768.6 RKO83479.1 - 8e-06 26.3 0.3 1.3e-05 25.6 0.3 1.3 1 0 0 1 1 1 1 Replication protein A interacting C-terminal Shugoshin_N PF07558.11 RKO83480.1 - 0.037 13.9 0.1 0.053 13.4 0.1 1.2 1 0 0 1 1 1 0 Shugoshin N-terminal coiled-coil region Mto2_bdg PF12808.7 RKO83480.1 - 0.17 12.2 2.8 0.27 11.5 0.6 2.0 2 0 0 2 2 2 0 Micro-tubular organiser Mto1 C-term Mto2-binding region EI24 PF07264.11 RKO83481.1 - 0.072 13.3 0.1 0.1 12.9 0.1 1.1 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) Ferrochelatase PF00762.19 RKO83482.1 - 1.7e-23 83.2 0.0 1.8e-23 83.1 0.0 1.0 1 0 0 1 1 1 1 Ferrochelatase DUF4294 PF14127.6 RKO83482.1 - 0.12 12.3 0.0 0.14 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4294) Voltage_CLC PF00654.20 RKO83485.1 - 9e-17 61.3 1.5 1.2e-16 61.0 1.5 1.1 1 0 0 1 1 1 1 Voltage gated chloride channel CBS PF00571.28 RKO83485.1 - 8.6e-10 38.9 1.2 7.9e-09 35.8 0.4 2.4 2 0 0 2 2 2 1 CBS domain Myc_N PF01056.18 RKO83486.1 - 0.042 13.8 0.8 0.042 13.7 0.8 1.1 1 0 0 1 1 1 0 Myc amino-terminal region Rogdi_lz PF10259.9 RKO83486.1 - 0.11 12.0 0.1 0.1 12.0 0.1 1.1 1 0 0 1 1 1 0 Rogdi leucine zipper containing protein Pkinase_Tyr PF07714.17 RKO83489.1 - 4.8e-32 111.3 0.0 2.1e-25 89.5 0.0 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase Pkinase PF00069.25 RKO83489.1 - 7.8e-22 77.9 0.0 3.1e-19 69.4 0.0 2.1 2 0 0 2 2 2 2 Protein kinase domain S-AdoMet_synt_C PF02773.16 RKO83489.1 - 0.041 13.9 0.2 0.07 13.1 0.2 1.2 1 0 0 1 1 1 0 S-adenosylmethionine synthetase, C-terminal domain Kinase-like PF14531.6 RKO83489.1 - 0.06 12.7 0.0 0.078 12.3 0.0 1.1 1 0 0 1 1 1 0 Kinase-like GDI PF00996.18 RKO83490.1 - 4.7e-192 638.3 0.1 5.6e-192 638.0 0.1 1.0 1 0 0 1 1 1 1 GDP dissociation inhibitor Amino_oxidase PF01593.24 RKO83490.1 - 0.012 14.9 0.0 0.015 14.6 0.0 1.2 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase Cyt-b5 PF00173.28 RKO83491.1 - 1.9e-08 34.3 0.0 4.5e-08 33.1 0.0 1.6 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Cytochrom_B561 PF03188.16 RKO83491.1 - 5.6e-07 29.8 5.7 7.5e-07 29.4 4.2 1.9 2 0 0 2 2 2 1 Eukaryotic cytochrome b561 DUF2427 PF10348.9 RKO83491.1 - 0.5 10.2 6.5 0.47 10.3 4.7 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF2427) DnaJ PF00226.31 RKO83492.1 - 5.9e-18 64.7 0.0 7.9e-18 64.3 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain F_bP_aldolase PF01116.20 RKO83493.1 - 1.3e-93 313.5 0.2 1.5e-93 313.3 0.2 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II S-methyl_trans PF02574.16 RKO83493.1 - 0.074 12.9 0.0 1.9 8.2 0.0 2.1 2 0 0 2 2 2 0 Homocysteine S-methyltransferase Lipase_GDSL_2 PF13472.6 RKO83493.1 - 0.084 13.3 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family ABC_sub_bind PF04392.12 RKO83493.1 - 0.099 11.9 0.0 5 6.3 0.0 2.2 2 0 0 2 2 2 0 ABC transporter substrate binding protein MAGE PF01454.19 RKO83495.1 - 1.5e-38 132.6 0.0 2e-38 132.2 0.0 1.1 1 0 0 1 1 1 1 MAGE family DNA_ligase_A_M PF01068.21 RKO83497.1 - 2.9e-62 209.9 0.0 4.2e-62 209.4 0.0 1.2 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_C PF04679.15 RKO83497.1 - 1.9e-13 50.8 0.0 4e-13 49.8 0.0 1.5 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 RKO83497.1 - 0.00014 22.2 0.1 0.00024 21.5 0.1 1.4 1 0 0 1 1 1 1 RNA ligase SCF PF02404.15 RKO83497.1 - 0.0075 15.6 0.0 0.014 14.7 0.0 1.4 1 0 0 1 1 1 1 Stem cell factor Ank_5 PF13857.6 RKO83500.1 - 1.1e-05 25.6 0.1 0.026 14.9 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO83500.1 - 0.00037 21.0 0.1 0.099 13.3 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO83500.1 - 0.0042 17.6 0.1 0.009 16.6 0.1 1.7 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO83500.1 - 0.029 14.9 0.1 3.3 8.6 0.0 2.7 3 0 0 3 3 3 0 Ankyrin repeat ChAPs PF09295.10 RKO83501.1 - 8.4e-22 77.7 0.0 1.3e-21 77.1 0.0 1.2 1 0 0 1 1 1 1 ChAPs (Chs5p-Arf1p-binding proteins) HEAT_EZ PF13513.6 RKO83503.1 - 2.6e-11 43.8 1.1 0.0012 19.3 0.0 5.6 5 1 1 6 6 6 3 HEAT-like repeat HEAT_2 PF13646.6 RKO83503.1 - 2.8e-05 24.4 0.0 0.19 12.2 0.0 4.0 3 1 1 4 4 4 3 HEAT repeats Vac14_Fab1_bd PF12755.7 RKO83503.1 - 0.00016 22.2 0.1 2.1 9.0 0.0 4.0 4 0 0 4 4 4 2 Vacuolar 14 Fab1-binding region HEAT PF02985.22 RKO83503.1 - 0.00019 21.4 5.5 0.0027 17.8 0.0 5.5 8 0 0 8 8 8 1 HEAT repeat CLASP_N PF12348.8 RKO83503.1 - 0.00099 18.7 0.0 0.73 9.4 0.0 3.5 3 0 0 3 3 3 1 CLASP N terminal IFRD PF05004.13 RKO83503.1 - 0.038 13.1 0.0 1.2 8.1 0.0 2.4 2 0 0 2 2 2 0 Interferon-related developmental regulator (IFRD) RNA_pol PF00940.19 RKO83504.1 - 1.4e-32 113.1 0.0 1.6e-32 112.9 0.0 1.0 1 0 0 1 1 1 1 DNA-dependent RNA polymerase RNA_pol PF00940.19 RKO83505.1 - 2.2e-105 352.9 0.0 2.8e-105 352.5 0.0 1.0 1 0 0 1 1 1 1 DNA-dependent RNA polymerase DUF3128 PF11326.8 RKO83508.1 - 2.7e-19 69.3 0.3 3.2e-19 69.1 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3128) CTD PF12815.7 RKO83510.1 - 0.015 15.8 0.0 1 10.0 0.0 3.9 2 2 0 2 2 2 0 Spt5 C-terminal nonapeptide repeat binding Spt4 DUF2621 PF11084.8 RKO83510.1 - 4.9 7.1 5.8 11 5.9 0.2 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2621) Kelch_4 PF13418.6 RKO83511.1 - 2.7e-14 52.9 10.4 3.1e-06 27.1 0.3 4.0 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO83511.1 - 4.8e-14 51.7 2.6 7.6e-07 28.6 0.1 3.5 4 0 0 4 4 4 2 Kelch motif Kelch_3 PF13415.6 RKO83511.1 - 8e-13 48.3 11.6 0.0002 21.6 0.2 4.1 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO83511.1 - 2.6e-12 46.4 0.3 5.4e-05 23.1 0.0 2.8 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 RKO83511.1 - 1.6e-11 44.1 6.2 0.0001 22.4 0.1 3.6 3 1 1 4 4 4 2 Kelch motif Kelch_2 PF07646.15 RKO83511.1 - 4e-08 32.9 0.4 7.9e-05 22.5 0.1 3.3 3 0 0 3 3 3 2 Kelch motif Dynamitin PF04912.14 RKO83512.1 - 0.036 13.4 1.5 0.17 11.2 0.5 2.0 1 1 1 2 2 2 0 Dynamitin CheZ PF04344.13 RKO83512.1 - 0.069 13.1 0.4 0.12 12.3 0.4 1.3 1 0 0 1 1 1 0 Chemotaxis phosphatase, CheZ Cache_3-Cache_2 PF17201.4 RKO83512.1 - 0.14 11.4 0.6 0.24 10.6 0.6 1.2 1 0 0 1 1 1 0 Cache 3/Cache 2 fusion domain Fib_alpha PF08702.10 RKO83512.1 - 1 9.5 6.2 2.2 8.5 3.1 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family MRG PF05712.13 RKO83514.1 - 3e-29 101.8 0.1 4.2e-29 101.3 0.1 1.1 1 0 0 1 1 1 1 MRG Tudor-knot PF11717.8 RKO83514.1 - 3.6e-09 36.4 0.4 7e-09 35.4 0.4 1.5 1 0 0 1 1 1 1 RNA binding activity-knot of a chromodomain Chromo PF00385.24 RKO83514.1 - 0.056 13.4 4.7 0.2 11.6 4.7 2.0 1 1 0 1 1 1 0 Chromo (CHRromatin Organisation MOdifier) domain TFIIS_M PF07500.14 RKO83515.1 - 1.5e-28 99.5 2.2 1.5e-28 99.5 2.2 1.9 2 0 0 2 2 2 1 Transcription factor S-II (TFIIS), central domain TFIIS_C PF01096.18 RKO83515.1 - 2.6e-18 65.6 6.5 3.9e-18 65.0 6.5 1.3 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS) Med26 PF08711.11 RKO83515.1 - 2.1e-07 30.9 0.7 3.9e-07 30.0 0.2 1.8 2 0 0 2 2 2 1 TFIIS helical bundle-like domain zf-DNL PF05180.12 RKO83515.1 - 0.051 13.5 1.9 0.13 12.2 1.9 1.6 1 0 0 1 1 1 0 DNL zinc finger DUF1542 PF07564.11 RKO83515.1 - 0.09 12.9 0.1 0.09 12.9 0.1 3.2 4 0 0 4 4 4 0 Domain of Unknown Function (DUF1542) XRN_M PF17846.1 RKO83515.1 - 1.4 7.8 5.6 1.5 7.7 4.8 1.3 1 1 0 1 1 1 0 Xrn1 helical domain Peptidase_M36 PF02128.15 RKO83517.1 - 1.4e-12 47.5 2.6 7.5e-11 41.8 0.3 2.1 2 0 0 2 2 2 2 Fungalysin metallopeptidase (M36) TPR_2 PF07719.17 RKO83519.1 - 5.1e-13 48.1 5.1 0.24 11.6 0.0 7.2 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_14 PF13428.6 RKO83519.1 - 2.3e-11 43.5 13.6 0.0036 18.0 0.2 6.7 4 1 2 6 6 6 4 Tetratricopeptide repeat TPR_1 PF00515.28 RKO83519.1 - 2.7e-10 39.6 1.7 0.13 12.1 0.0 6.5 7 0 0 7 7 6 2 Tetratricopeptide repeat TPR_8 PF13181.6 RKO83519.1 - 8.5e-08 31.8 2.6 21 5.7 0.1 7.2 8 0 0 8 8 8 0 Tetratricopeptide repeat TPR_19 PF14559.6 RKO83519.1 - 9.2e-08 32.5 16.4 0.0018 18.7 0.1 5.2 3 1 3 6 6 6 3 Tetratricopeptide repeat TPR_11 PF13414.6 RKO83519.1 - 1.6e-05 24.5 1.6 0.099 12.3 0.5 4.8 6 0 0 6 6 6 1 TPR repeat TPR_12 PF13424.6 RKO83519.1 - 6.3e-05 23.2 12.5 1.1 9.5 1.2 5.7 3 3 3 6 6 6 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO83519.1 - 0.00018 22.1 10.2 0.072 13.7 0.2 4.7 4 1 2 6 6 6 3 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO83519.1 - 0.00019 21.6 5.5 0.37 11.1 0.1 3.7 2 1 2 4 4 4 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.6 RKO83519.1 - 0.0017 17.7 6.9 0.022 14.0 0.6 2.7 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 RKO83519.1 - 0.0019 18.1 4.6 5 7.4 0.2 5.8 5 1 1 6 6 6 1 Tetratricopeptide repeat TPR_9 PF13371.6 RKO83519.1 - 0.004 17.3 6.2 0.16 12.2 0.1 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 RKO83519.1 - 0.083 13.6 3.5 35 5.3 0.0 5.0 4 1 0 4 4 4 0 Tetratricopeptide repeat ChAPs PF09295.10 RKO83519.1 - 0.32 10.0 1.1 2 7.3 0.1 2.0 2 0 0 2 2 2 0 ChAPs (Chs5p-Arf1p-binding proteins) Lipase_3 PF01764.25 RKO83520.1 - 0.00015 21.6 0.0 0.00021 21.2 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) Lipase_3 PF01764.25 RKO83521.1 - 5e-15 55.6 0.1 7.1e-15 55.1 0.1 1.2 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO83521.1 - 0.0013 18.3 1.2 0.0035 16.9 1.2 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Kinesin PF00225.23 RKO83523.1 - 7.5e-12 44.8 0.0 7.5e-12 44.8 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO83523.1 - 4.2e-10 39.8 0.0 6.2e-10 39.2 0.0 1.3 1 1 0 1 1 1 1 Microtubule binding T2SSE PF00437.20 RKO83523.1 - 0.07 12.2 0.0 0.071 12.1 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein Ras PF00071.22 RKO83524.1 - 2.1e-48 164.0 0.4 2.4e-48 163.8 0.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO83524.1 - 2.1e-16 60.2 0.0 3e-16 59.7 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO83524.1 - 2.7e-07 30.2 0.0 3e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 RKO83524.1 - 9.7e-05 22.3 0.0 0.009 15.9 0.0 2.1 2 0 0 2 2 2 1 RsgA GTPase GTP_EFTU PF00009.27 RKO83524.1 - 0.00037 20.1 0.2 0.0088 15.6 0.1 2.2 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 RKO83524.1 - 0.0027 17.7 0.0 0.0037 17.3 0.0 1.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_14 PF13173.6 RKO83524.1 - 0.016 15.2 0.0 0.025 14.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain SRPRB PF09439.10 RKO83524.1 - 0.019 14.4 0.0 0.027 13.9 0.0 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_16 PF13191.6 RKO83524.1 - 0.19 12.1 0.0 0.21 12.0 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain DEP PF00610.21 RKO83525.1 - 1.2e-09 38.1 0.0 1.5e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) Usp PF00582.26 RKO83528.1 - 0.00013 22.5 0.0 0.00017 22.1 0.0 1.3 1 0 0 1 1 1 1 Universal stress protein family Usp PF00582.26 RKO83529.1 - 3e-24 86.1 0.9 4.8e-24 85.5 0.9 1.3 1 0 0 1 1 1 1 Universal stress protein family ChuX_HutX PF06228.13 RKO83529.1 - 0.065 13.0 0.0 0.095 12.5 0.0 1.2 1 0 0 1 1 1 0 Haem utilisation ChuX/HutX SSB PF00436.25 RKO83534.1 - 1.2e-09 38.1 0.1 7.6e-09 35.6 0.1 1.9 1 1 0 1 1 1 1 Single-strand binding protein family PNISR PF15996.5 RKO83536.1 - 0.1 12.9 2.6 0.14 12.4 2.6 1.1 1 0 0 1 1 1 0 Arginine/serine-rich protein PNISR ResIII PF04851.15 RKO83538.1 - 1.5e-07 31.6 0.0 0.0073 16.3 0.0 2.2 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit DEAD PF00270.29 RKO83538.1 - 3.3e-07 30.2 0.0 0.0001 22.1 0.0 3.0 2 1 0 2 2 2 1 DEAD/DEAH box helicase Ferrochelatase PF00762.19 RKO83539.1 - 2e-81 273.5 0.0 2.3e-81 273.4 0.0 1.0 1 0 0 1 1 1 1 Ferrochelatase MIIP PF15734.5 RKO83542.1 - 0.014 15.0 0.1 0.019 14.5 0.1 1.2 1 0 0 1 1 1 0 Migration and invasion-inhibitory SOG2 PF10428.9 RKO83543.1 - 0.0088 15.3 10.8 0.011 14.9 10.8 1.2 1 0 0 1 1 1 1 RAM signalling pathway protein Minor_capsid_2 PF11114.8 RKO83546.1 - 0.014 15.5 0.9 0.047 13.7 0.9 2.1 1 0 0 1 1 1 0 Minor capsid protein DUF1922 PF09082.10 RKO83546.1 - 2 8.8 10.4 2.4 8.5 0.4 3.7 3 1 1 4 4 4 0 Domain of unknown function (DUF1922) Hist_deacetyl PF00850.19 RKO83550.1 - 1.2e-82 277.8 0.0 1.4e-82 277.6 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain Ribosomal_L3 PF00297.22 RKO83554.1 - 1.3e-91 307.4 0.7 1.5e-91 307.2 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 Tmemb_14 PF03647.13 RKO83555.1 - 0.0024 18.5 3.2 0.0043 17.8 3.2 1.5 1 1 0 1 1 1 1 Transmembrane proteins 14C Response_reg PF00072.24 RKO83557.1 - 1.2e-11 44.7 0.0 0.00016 21.8 0.0 2.1 1 1 1 2 2 2 2 Response regulator receiver domain Tcell_CD4_C PF12104.8 RKO83559.1 - 0.29 11.1 1.2 0.54 10.2 1.2 1.4 1 0 0 1 1 1 0 T cell CD4 receptor C terminal region ABC_tran PF00005.27 RKO83560.1 - 0.0061 17.1 0.2 0.011 16.3 0.2 1.4 1 0 0 1 1 1 1 ABC transporter Abhydrolase_1 PF00561.20 RKO83561.1 - 3.2e-13 49.9 0.0 4e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 RKO83561.1 - 1.2e-11 44.4 0.0 2e-11 43.6 0.0 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO83561.1 - 3.6e-09 37.6 0.4 3.6e-09 37.6 0.4 1.4 2 0 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 RKO83561.1 - 0.016 15.0 0.1 0.031 14.0 0.1 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase family Lipase_3 PF01764.25 RKO83561.1 - 0.04 13.8 0.0 0.058 13.3 0.0 1.3 1 0 0 1 1 1 0 Lipase (class 3) PGAP1 PF07819.13 RKO83561.1 - 0.054 13.2 0.1 0.075 12.7 0.1 1.3 1 1 0 1 1 1 0 PGAP1-like protein DUF2974 PF11187.8 RKO83561.1 - 0.085 12.4 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Abhydrolase_2 PF02230.16 RKO83561.1 - 0.088 12.6 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Phospholipase/Carboxylesterase Peptidase_S9 PF00326.21 RKO83561.1 - 0.11 12.0 0.1 0.31 10.5 0.1 1.6 1 1 0 1 1 1 0 Prolyl oligopeptidase family DLH PF01738.18 RKO83561.1 - 0.15 11.6 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Dienelactone hydrolase family PNP_UDP_1 PF01048.20 RKO83562.1 - 1.1e-37 129.5 0.1 1.3e-37 129.3 0.1 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily LRR_6 PF13516.6 RKO83563.1 - 0.14 12.3 0.0 3.2 8.0 0.0 3.2 3 0 0 3 3 3 0 Leucine Rich repeat JHD PF17811.1 RKO83564.1 - 1.4e-15 57.7 0.6 2.1e-15 57.1 0.6 1.3 1 0 0 1 1 1 1 Jumonji helical domain Cupin_8 PF13621.6 RKO83564.1 - 0.045 13.5 0.0 0.16 11.7 0.0 1.8 2 0 0 2 2 2 0 Cupin-like domain eIF2A PF08662.11 RKO83564.1 - 0.1 12.4 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A SasG_E PF17041.5 RKO83566.1 - 0.091 12.8 0.3 4.3 7.4 0.0 3.0 3 0 0 3 3 3 0 E domain PPR_2 PF13041.6 RKO83567.1 - 1.3e-32 111.7 0.0 9.3e-08 32.1 0.0 8.1 5 3 3 8 8 8 7 PPR repeat family PPR_1 PF12854.7 RKO83567.1 - 8.8e-26 89.3 0.0 8.3e-05 22.2 0.0 7.7 7 0 0 7 7 7 6 PPR repeat PPR PF01535.20 RKO83567.1 - 4.3e-24 83.0 0.1 0.00052 20.1 0.0 8.8 9 0 0 9 9 8 4 PPR repeat PPR_3 PF13812.6 RKO83567.1 - 3.8e-13 49.3 0.0 4e-05 23.6 0.0 4.8 3 1 1 5 5 5 3 Pentatricopeptide repeat domain PPR_long PF17177.4 RKO83567.1 - 1.3e-07 31.3 1.4 0.13 11.6 0.0 4.0 3 1 1 4 4 4 2 Pentacotripeptide-repeat region of PRORP TPR_19 PF14559.6 RKO83567.1 - 0.002 18.6 12.0 0.042 14.4 0.1 5.8 5 1 1 6 6 6 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO83567.1 - 0.013 16.2 27.3 13 6.9 0.1 9.0 4 3 6 10 10 10 0 Tetratricopeptide repeat Toxin_YhaV PF11663.8 RKO83567.1 - 0.099 12.7 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Toxin with endonuclease activity, of toxin-antitoxin system TPR_4 PF07721.14 RKO83567.1 - 1.7 9.5 20.6 18 6.3 0.1 6.5 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_10 PF13374.6 RKO83567.1 - 3.3 7.7 10.7 30 4.7 0.0 5.6 7 0 0 7 7 7 0 Tetratricopeptide repeat TetR_C_11 PF16859.5 RKO83567.1 - 4.2 7.7 13.2 4.3 7.7 0.5 3.5 3 1 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain CysG_dimeriser PF10414.9 RKO83567.1 - 7.3 6.4 8.1 29 4.5 0.1 4.5 5 0 0 5 5 5 0 Sirohaem synthase dimerisation region MULE PF10551.9 RKO83568.1 - 0.00096 19.5 0.0 0.0019 18.5 0.0 1.5 1 0 0 1 1 1 1 MULE transposase domain RSN1_7TM PF02714.15 RKO83570.1 - 0.0054 16.1 0.6 0.0077 15.6 0.1 1.4 2 0 0 2 2 2 1 Calcium-dependent channel, 7TM region, putative phosphate NTP_transf_2 PF01909.23 RKO83571.1 - 7.7e-06 26.1 0.0 1.2e-05 25.5 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 RKO83571.1 - 0.17 12.0 0.0 0.3 11.2 0.0 1.3 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase Ribosomal_L12_N PF16320.5 RKO83572.1 - 1.3e-05 24.8 0.3 2.7e-05 23.8 0.3 1.6 1 0 0 1 1 1 1 Ribosomal protein L7/L12 dimerisation domain Formyl_trans_N PF00551.19 RKO83572.1 - 0.12 12.1 0.2 0.2 11.4 0.2 1.2 1 0 0 1 1 1 0 Formyl transferase Androgen_recep PF02166.16 RKO83573.1 - 0.63 8.8 20.6 0.95 8.2 20.6 1.2 1 0 0 1 1 1 0 Androgen receptor TSKS PF15358.6 RKO83573.1 - 1.1 7.6 3.0 1.4 7.2 3.0 1.1 1 0 0 1 1 1 0 Testis-specific serine kinase substrate TFIIA PF03153.13 RKO83573.1 - 1.3 8.9 12.3 1.7 8.5 12.3 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Pex14_N PF04695.13 RKO83573.1 - 6.3 7.4 24.1 1.6 9.4 20.9 1.6 2 0 0 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region UCH PF00443.29 RKO83574.1 - 1.8e-27 96.4 0.0 2.1e-27 96.2 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 RKO83574.1 - 5.2e-08 32.8 0.0 6.5e-08 32.5 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Tet_JBP PF12851.7 RKO83575.1 - 3.7e-07 29.8 0.0 4.8e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Oxygenase domain of the 2OGFeDO superfamily Dak1 PF02733.17 RKO83576.1 - 2.1 7.1 7.7 2.1 7.2 0.2 3.4 1 1 3 4 4 4 0 Dak1 domain Sugar_tr PF00083.24 RKO83577.1 - 5.8e-117 391.3 29.3 6.6e-117 391.1 29.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 RKO83577.1 - 8.4e-29 100.6 40.5 5e-23 81.6 17.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily ABC_membrane PF00664.23 RKO83578.1 - 2.9e-12 46.8 0.7 2.4e-09 37.3 0.0 2.1 2 0 0 2 2 2 2 ABC transporter transmembrane region ABC_tran PF00005.27 RKO83578.1 - 2.6e-07 31.2 0.0 3.9e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 RKO83578.1 - 0.0029 17.5 0.1 0.0047 16.8 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase Dynamin_N PF00350.23 RKO83578.1 - 0.0031 17.6 0.1 0.0052 16.9 0.1 1.4 1 0 0 1 1 1 1 Dynamin family MMR_HSR1 PF01926.23 RKO83578.1 - 0.007 16.4 0.0 0.017 15.2 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase Presenilin PF01080.17 RKO83578.1 - 0.095 11.5 0.1 0.18 10.6 0.1 1.4 1 0 0 1 1 1 0 Presenilin SBE2 PF17076.5 RKO83578.1 - 0.34 9.1 0.9 0.45 8.7 0.9 1.1 1 0 0 1 1 1 0 SBE2, cell-wall formation EMP70 PF02990.16 RKO83578.1 - 0.48 9.0 2.8 0.18 10.5 0.2 1.5 2 0 0 2 2 2 0 Endomembrane protein 70 Membr_traf_MHD PF10540.9 RKO83581.1 - 7.1e-12 45.7 0.1 0.0002 21.6 0.5 2.6 1 1 1 2 2 2 2 Munc13 (mammalian uncoordinated) homology domain C2 PF00168.30 RKO83581.1 - 2.9e-10 40.3 0.0 1.1e-08 35.3 0.0 2.4 1 1 0 1 1 1 1 C2 domain DUF810 PF05664.11 RKO83581.1 - 0.00035 19.2 0.0 0.00058 18.5 0.0 1.2 1 0 0 1 1 1 1 Plant family of unknown function (DUF810) SET PF00856.28 RKO83582.1 - 2.5e-09 37.8 0.0 2.8e-09 37.6 0.0 1.2 1 0 0 1 1 1 1 SET domain SCAMP PF04144.13 RKO83585.1 - 3.3e-30 105.7 2.9 4.5e-30 105.2 1.2 1.8 2 0 0 2 2 2 1 SCAMP family NPIP PF06409.11 RKO83585.1 - 0.092 11.8 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Nuclear pore complex interacting protein (NPIP) Peptidase_C48 PF02902.19 RKO83586.1 - 3.1e-42 144.9 1.4 3.7e-42 144.6 1.4 1.1 1 0 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain Peptidase_C57 PF03290.13 RKO83586.1 - 0.012 14.3 1.4 1.9 7.1 0.1 2.5 2 1 0 2 2 2 0 Vaccinia virus I7 processing peptidase Acetyltransf_10 PF13673.7 RKO83588.1 - 1.1e-14 54.4 0.0 1.2e-14 54.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 RKO83588.1 - 2.3e-11 44.0 0.1 2.7e-11 43.7 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 RKO83588.1 - 7.4e-07 29.1 0.1 1.1e-06 28.5 0.1 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.7 RKO83588.1 - 7.5e-07 29.5 0.1 1.1e-06 29.0 0.1 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_5 PF13444.6 RKO83588.1 - 2.3e-06 28.3 0.0 1.4e-05 25.7 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 RKO83588.1 - 0.00053 20.1 0.1 0.012 15.6 0.1 2.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 RKO83588.1 - 0.04 14.0 0.0 0.064 13.4 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Sfi1 PF08457.10 RKO83590.1 - 0.33 9.5 59.9 0.42 9.1 18.9 2.2 2 0 0 2 2 2 0 Sfi1 spindle body protein FeoC PF09012.10 RKO83590.1 - 0.98 9.5 4.7 11 6.2 0.7 2.8 3 0 0 3 3 3 0 FeoC like transcriptional regulator EF-G-binding_N PF07299.11 RKO83593.1 - 0.094 13.2 0.6 0.094 13.2 0.6 4.1 3 1 2 5 5 5 0 Elongation factor G-binding protein, N-terminal IF3_C PF00707.22 RKO83593.1 - 0.69 9.9 5.2 0.93 9.5 0.5 3.4 3 1 1 4 4 4 0 Translation initiation factor IF-3, C-terminal domain zf-primase PF09329.11 RKO83594.1 - 0.13 12.1 2.6 0.39 10.6 1.2 2.4 2 1 1 3 3 3 0 Primase zinc finger AAA PF00004.29 RKO83596.1 - 4e-44 150.2 0.0 6.5e-44 149.6 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 RKO83596.1 - 2e-10 40.3 0.2 5.6e-10 38.9 0.2 1.8 1 0 0 1 1 1 1 AAA+ lid domain RuvB_N PF05496.12 RKO83596.1 - 3.7e-09 36.5 0.0 1.1e-07 31.7 0.0 2.5 1 1 1 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 RKO83596.1 - 4.7e-07 29.9 0.1 1.8e-05 24.8 0.1 2.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 RKO83596.1 - 8.3e-07 29.5 1.8 3.3e-05 24.3 1.8 3.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 RKO83596.1 - 9.8e-05 22.6 0.1 0.0083 16.4 0.0 2.7 2 1 1 3 3 3 1 AAA domain AAA_33 PF13671.6 RKO83596.1 - 0.00043 20.5 0.0 0.00096 19.3 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 RKO83596.1 - 0.00071 19.6 0.0 0.00096 19.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 RKO83596.1 - 0.00084 18.6 0.1 0.0022 17.3 0.0 1.6 1 1 1 2 2 2 1 TIP49 P-loop domain AAA_2 PF07724.14 RKO83596.1 - 0.0018 18.4 0.0 0.0035 17.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_24 PF13479.6 RKO83596.1 - 0.0033 17.2 0.0 0.0062 16.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 RKO83596.1 - 0.0035 17.9 0.0 0.0066 17.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.6 RKO83596.1 - 0.0053 17.0 0.0 0.016 15.5 0.0 1.8 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 RKO83596.1 - 0.012 15.0 0.1 0.023 14.1 0.1 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 RKO83596.1 - 0.013 15.2 0.0 0.13 12.0 0.0 2.2 1 1 0 1 1 1 0 Sigma-54 interaction domain IstB_IS21 PF01695.17 RKO83596.1 - 0.016 15.0 0.0 0.024 14.3 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein RNA_helicase PF00910.22 RKO83596.1 - 0.03 14.7 0.0 0.047 14.1 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_25 PF13481.6 RKO83596.1 - 0.031 13.9 0.6 0.2 11.2 0.1 2.3 2 1 0 3 3 3 0 AAA domain Zeta_toxin PF06414.12 RKO83596.1 - 0.042 13.1 0.0 0.1 11.9 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_7 PF12775.7 RKO83596.1 - 0.044 13.3 0.0 0.14 11.6 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region ATPase PF06745.13 RKO83596.1 - 0.053 12.9 0.0 0.22 10.9 0.0 1.8 2 0 0 2 2 2 0 KaiC PhoH PF02562.16 RKO83596.1 - 0.061 12.8 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein IPT PF01745.16 RKO83596.1 - 0.074 12.4 0.1 0.13 11.7 0.1 1.3 1 0 0 1 1 1 0 Isopentenyl transferase DUF2075 PF09848.9 RKO83596.1 - 0.084 12.1 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Parvo_NS1 PF01057.17 RKO83596.1 - 0.092 11.8 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 TsaE PF02367.17 RKO83596.1 - 0.1 12.6 0.0 0.16 12.0 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Brr6_like_C_C PF10104.9 RKO83601.1 - 3.4e-24 85.1 0.7 3.9e-24 84.9 0.7 1.0 1 0 0 1 1 1 1 Di-sulfide bridge nucleocytoplasmic transport domain SR-25 PF10500.9 RKO83602.1 - 0.00069 19.3 17.0 0.00085 19.0 17.0 1.2 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein RNA_polI_A34 PF08208.11 RKO83602.1 - 0.013 15.6 12.1 0.013 15.6 12.1 1.1 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 IMUP PF15761.5 RKO83602.1 - 0.095 13.4 24.0 0.15 12.8 24.0 1.2 1 0 0 1 1 1 0 Immortalisation up-regulated protein DUF4964 PF16334.5 RKO83602.1 - 0.15 11.7 0.0 0.25 10.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4964) CDC45 PF02724.14 RKO83602.1 - 0.4 8.9 9.9 0.37 9.0 9.9 1.1 1 0 0 1 1 1 0 CDC45-like protein RPN2_C PF18004.1 RKO83602.1 - 0.54 10.2 11.9 0.69 9.8 11.9 1.2 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain Tim54 PF11711.8 RKO83602.1 - 1.2 7.9 14.1 0.69 8.6 11.9 1.5 1 1 1 2 2 2 0 Inner membrane protein import complex subunit Tim54 TMEM214 PF10151.9 RKO83602.1 - 1.3 7.4 5.9 1.2 7.5 5.9 1.1 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator DUF4519 PF15012.6 RKO83602.1 - 2.7 8.2 5.7 5.6 7.2 5.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4519) MCM_bind PF09739.9 RKO83602.1 - 3.2 6.1 8.0 3.7 5.9 8.0 1.1 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor DUF3827 PF12877.7 RKO83602.1 - 3.5 5.9 8.7 3.8 5.8 8.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) Zip PF02535.22 RKO83602.1 - 3.9 6.6 5.9 4 6.6 5.9 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter NPR3 PF03666.13 RKO83602.1 - 4 6.1 9.7 4.2 6.1 9.7 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Presenilin PF01080.17 RKO83602.1 - 4.5 5.9 7.4 4.2 6.0 7.4 1.1 1 0 0 1 1 1 0 Presenilin DUF913 PF06025.12 RKO83602.1 - 9.4 5.1 9.0 11 4.8 9.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) PH_15 PF17339.2 RKO83603.1 - 0.011 15.6 0.0 2.8 7.9 0.0 2.2 2 0 0 2 2 2 0 PH domain Lipase_3 PF01764.25 RKO83604.1 - 0.15 11.9 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 Lipase (class 3) Ribosomal_L27A PF00828.19 RKO83606.1 - 1.4e-20 74.3 0.0 1.9e-20 73.9 0.0 1.3 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Tmemb_170 PF10190.9 RKO83608.1 - 0.26 11.7 3.3 0.39 11.1 3.3 1.2 1 0 0 1 1 1 0 Putative transmembrane protein 170 DUF3486 PF11985.8 RKO83608.1 - 0.4 11.1 7.5 0.5 10.8 7.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3486) HisKA_3 PF07730.13 RKO83608.1 - 0.95 10.0 4.2 0.89 10.1 1.2 2.4 2 1 0 2 2 2 0 Histidine kinase Usp PF00582.26 RKO83608.1 - 1.8 9.0 8.4 4.9 7.7 0.6 2.0 1 1 1 2 2 2 0 Universal stress protein family HSP20 PF00011.21 RKO83609.1 - 4.8e-20 71.6 0.3 4.8e-20 71.6 0.3 1.3 2 0 0 2 2 2 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 RKO83609.1 - 1.6e-10 40.4 0.0 3.2e-10 39.4 0.0 1.5 1 1 0 1 1 1 1 HSP20-like domain found in ArsA GvpH PF05455.11 RKO83609.1 - 0.0038 17.3 0.1 0.022 14.9 0.1 2.0 1 1 0 1 1 1 1 GvpH AMP-binding PF00501.28 RKO83612.1 - 9.5e-73 245.2 0.0 1.2e-72 244.9 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 RKO83612.1 - 1.1e-16 60.5 0.1 1.9e-16 59.7 0.1 1.4 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus LRR_6 PF13516.6 RKO83613.1 - 1.1e-11 43.8 5.1 0.076 13.1 0.0 8.4 9 0 0 9 9 9 2 Leucine Rich repeat LRR_8 PF13855.6 RKO83613.1 - 3.9e-08 32.9 1.1 0.0013 18.5 0.0 4.7 5 0 0 5 5 5 2 Leucine rich repeat LRR_4 PF12799.7 RKO83613.1 - 3.7e-07 30.4 0.2 1.8 9.1 0.0 5.5 6 0 0 6 6 6 2 Leucine Rich repeats (2 copies) CCDC53 PF10152.9 RKO83614.1 - 0.065 13.6 0.3 0.065 13.6 0.3 3.3 2 1 1 3 3 3 0 Subunit CCDC53 of WASH complex Metallophos PF00149.28 RKO83615.1 - 0.00014 22.4 0.0 0.00025 21.6 0.0 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase CSS-motif PF12792.7 RKO83615.1 - 0.05 13.1 0.0 0.071 12.6 0.0 1.2 1 0 0 1 1 1 0 CSS motif domain associated with EAL Cation_ATPase PF13246.6 RKO83617.1 - 6.7e-07 29.3 0.0 1.8e-06 27.9 0.0 1.6 2 0 0 2 2 2 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 RKO83618.1 - 7.2e-05 22.6 0.0 7.2e-05 22.6 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 RKO83618.1 - 0.012 15.9 0.0 0.014 15.7 0.0 1.2 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase HAD PF12710.7 RKO83618.1 - 0.095 13.1 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase BING4CT PF08149.11 RKO83619.1 - 0.028 14.2 0.1 0.076 12.8 0.1 1.8 1 1 0 1 1 1 0 BING4CT (NUC141) domain Beta-lactamase PF00144.24 RKO83620.1 - 2e-38 132.5 0.1 6.8e-38 130.7 0.1 1.7 1 1 0 1 1 1 1 Beta-lactamase ATP-synt_F PF01990.17 RKO83620.1 - 0.16 12.3 0.0 0.36 11.2 0.0 1.6 1 0 0 1 1 1 0 ATP synthase (F/14-kDa) subunit Cas_Csn2 PF09711.10 RKO83621.1 - 0.0057 16.3 3.1 0.0064 16.2 0.3 2.1 1 1 1 2 2 2 1 CRISPR-associated protein (Cas_Csn2) Desmo_N PF06771.11 RKO83621.1 - 0.018 15.4 2.2 4.1 7.8 0.2 2.7 1 1 1 2 2 2 0 Viral Desmoplakin N-terminus HSBP1 PF06825.12 RKO83621.1 - 0.018 14.9 4.9 10 6.0 0.1 4.6 4 1 0 4 4 4 0 Heat shock factor binding protein 1 TBCC_N PF16752.5 RKO83621.1 - 0.05 14.1 6.3 0.28 11.6 0.4 3.1 2 1 2 4 4 4 0 Tubulin-specific chaperone C N-terminal domain Nup54 PF13874.6 RKO83621.1 - 0.3 11.2 3.7 3.5 7.7 0.7 2.6 2 1 0 2 2 2 0 Nucleoporin complex subunit 54 DUF16 PF01519.16 RKO83621.1 - 0.74 10.3 7.4 2.9 8.4 0.8 3.4 1 1 1 2 2 2 0 Protein of unknown function DUF16 Exonuc_VII_L PF02601.15 RKO83621.1 - 2.6 7.5 9.5 31 4.0 9.5 2.0 1 1 0 1 1 1 0 Exonuclease VII, large subunit BLOC1_2 PF10046.9 RKO83621.1 - 5.8 7.3 8.5 1.6 9.1 0.4 3.4 2 2 2 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Cation_ATPase PF13246.6 RKO83622.1 - 7.7e-20 70.8 0.0 1.7e-19 69.7 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase PF00702.26 RKO83622.1 - 3.9e-19 69.8 0.1 1e-18 68.4 0.1 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 RKO83622.1 - 1.2e-09 38.0 2.1 2.1e-09 37.2 2.1 1.4 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase_3 PF08282.12 RKO83622.1 - 2.6e-05 24.1 0.6 0.0013 18.5 0.3 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Voldacs PF03517.13 RKO83624.1 - 0.00076 19.6 2.0 0.088 12.9 2.8 2.6 2 0 0 2 2 2 1 Regulator of volume decrease after cellular swelling NOA36 PF06524.12 RKO83624.1 - 0.0077 15.6 10.1 0.014 14.8 10.1 1.3 1 0 0 1 1 1 1 NOA36 protein DNA_pol_phi PF04931.13 RKO83624.1 - 0.088 10.9 10.5 0.12 10.5 10.5 1.1 1 0 0 1 1 1 0 DNA polymerase phi Nop14 PF04147.12 RKO83624.1 - 0.11 10.6 3.3 0.14 10.3 3.3 1.3 1 0 0 1 1 1 0 Nop14-like family DUF4611 PF15387.6 RKO83624.1 - 0.32 11.2 12.7 0.078 13.2 6.3 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4611) Sporozoite_P67 PF05642.11 RKO83624.1 - 0.55 8.3 5.9 1.1 7.3 5.9 1.6 1 0 0 1 1 1 0 Sporozoite P67 surface antigen RXT2_N PF08595.11 RKO83624.1 - 0.57 10.2 4.8 1.3 9.0 4.8 1.6 1 0 0 1 1 1 0 RXT2-like, N-terminal Importin_rep_4 PF18808.1 RKO83624.1 - 0.71 10.2 5.0 1.7 9.0 3.3 2.3 2 0 0 2 2 2 0 Importin repeat RRN3 PF05327.11 RKO83624.1 - 0.97 7.9 4.3 1.3 7.5 4.3 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 PBP1_TM PF14812.6 RKO83624.1 - 1.8 9.0 16.9 1.9 8.9 12.0 3.4 3 0 0 3 3 3 0 Transmembrane domain of transglycosylase PBP1 at N-terminal CDC45 PF02724.14 RKO83624.1 - 2.5 6.3 9.3 4.1 5.6 9.3 1.2 1 0 0 1 1 1 0 CDC45-like protein FAM176 PF14851.6 RKO83624.1 - 6.9 6.3 10.8 1.5 8.5 4.0 2.7 3 0 0 3 3 3 0 FAM176 family GST_N PF02798.20 RKO83627.1 - 2e-16 60.1 3.6 3.6e-16 59.3 0.0 2.4 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain EF1G PF00647.19 RKO83627.1 - 6e-15 55.2 0.2 1.2e-14 54.2 0.2 1.6 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_C PF00043.25 RKO83627.1 - 7.3e-13 48.5 0.0 7.3e-13 48.5 0.0 2.6 2 2 0 2 2 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 RKO83627.1 - 2.2e-10 40.8 0.0 7e-10 39.2 0.0 1.8 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 RKO83627.1 - 8.1e-09 35.4 0.0 8.7e-08 32.1 0.0 2.2 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 RKO83627.1 - 4.9e-07 29.9 0.0 1.3e-06 28.6 0.0 1.8 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 RKO83627.1 - 3.4e-06 27.2 0.1 3.4e-06 27.2 0.1 1.9 2 0 0 2 2 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 RKO83627.1 - 0.01 15.6 0.1 0.021 14.6 0.1 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Tom37 PF10568.9 RKO83627.1 - 0.064 13.6 0.0 0.13 12.6 0.0 1.5 1 0 0 1 1 1 0 Outer mitochondrial membrane transport complex protein Pox_Ag35 PF03286.14 RKO83627.1 - 0.13 12.1 6.1 0.22 11.3 6.1 1.3 1 0 0 1 1 1 0 Pox virus Ag35 surface protein FAM176 PF14851.6 RKO83627.1 - 0.58 9.8 1.8 1 9.0 1.8 1.3 1 0 0 1 1 1 0 FAM176 family Ank_2 PF12796.7 RKO83628.1 - 4e-24 85.0 0.1 3e-13 50.1 0.0 3.4 1 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO83628.1 - 3.9e-18 65.3 0.2 2.2e-08 34.2 0.0 4.0 3 1 0 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 RKO83628.1 - 1.4e-14 53.7 5.5 0.0025 18.2 0.0 5.8 6 0 0 6 6 6 4 Ankyrin repeat Ank_3 PF13606.6 RKO83628.1 - 5.2e-14 51.0 0.8 0.0049 17.3 0.0 5.5 6 0 0 6 6 6 4 Ankyrin repeat Ank_4 PF13637.6 RKO83628.1 - 1.9e-13 50.6 0.2 0.017 15.7 0.0 5.1 2 1 4 6 6 6 4 Ankyrin repeats (many copies) fn3 PF00041.21 RKO83628.1 - 1.4e-05 25.3 0.0 2.8e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Fibronectin type III domain Ank_5 PF13857.6 RKO83629.1 - 6.8e-17 61.3 3.2 0.0054 17.0 0.0 7.8 3 2 6 9 9 9 6 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO83629.1 - 1.6e-14 54.2 0.1 0.00019 22.0 0.0 4.5 2 1 3 5 5 5 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO83629.1 - 1.3e-12 48.0 2.2 0.0045 17.5 0.0 6.5 4 1 4 8 8 8 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO83629.1 - 1.8e-06 27.8 0.7 35 5.4 0.0 7.4 8 0 0 8 8 8 0 Ankyrin repeat DUF5049 PF16468.5 RKO83629.1 - 0.00082 19.2 0.1 0.37 10.7 0.0 4.1 3 1 2 5 5 5 1 Domain of unknown function (DUF5049) Ank PF00023.30 RKO83629.1 - 0.036 14.5 0.2 2.3e+02 2.5 0.0 5.2 5 1 0 5 5 5 0 Ankyrin repeat YmaF PF12788.7 RKO83629.1 - 0.13 12.8 2.0 19 5.8 0.1 2.5 2 0 0 2 2 2 0 YmaF family TPR_12 PF13424.6 RKO83630.1 - 0.088 13.1 0.1 0.25 11.7 0.1 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_2 PF07719.17 RKO83630.1 - 0.091 12.9 0.5 0.2 11.9 0.5 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat Methyltransf_2 PF00891.18 RKO83631.1 - 8.8e-07 28.4 0.0 1.1e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain Cullin PF00888.22 RKO83632.1 - 9e-116 387.9 0.3 1.2e-115 387.5 0.3 1.2 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 RKO83632.1 - 4.8e-23 81.0 0.9 9.3e-23 80.1 0.9 1.5 1 0 0 1 1 1 1 Cullin protein neddylation domain Sin_N PF04801.13 RKO83632.1 - 0.043 13.0 0.1 0.1 11.8 0.0 1.7 2 0 0 2 2 2 0 Sin-like protein conserved region Retrotran_gag_2 PF14223.6 RKO83633.1 - 4.3e-08 32.9 0.0 0.0028 17.3 0.0 2.1 2 0 0 2 2 2 2 gag-polypeptide of LTR copia-type G-patch PF01585.23 RKO83635.1 - 3.1e-12 46.2 1.2 3.1e-12 46.2 1.2 2.1 2 0 0 2 2 2 1 G-patch domain G-patch_2 PF12656.7 RKO83635.1 - 0.01 15.9 0.3 0.01 15.9 0.3 3.5 5 1 0 5 5 5 0 G-patch domain EutN_CcmL PF03319.13 RKO83635.1 - 0.16 12.5 4.9 5.2 7.7 0.1 2.9 3 0 0 3 3 3 0 Ethanolamine utilisation protein EutN/carboxysome WD40 PF00400.32 RKO83636.1 - 0.0066 17.3 1.4 0.13 13.2 0.0 3.3 4 0 0 4 4 4 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO83636.1 - 0.017 15.4 0.0 6.6 7.1 0.0 2.4 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 RKO83636.1 - 0.17 10.8 0.2 0.47 9.4 0.1 1.7 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein CbbQ_C PF08406.10 RKO83637.1 - 0.037 14.3 0.0 0.063 13.5 0.0 1.4 1 0 0 1 1 1 0 CbbQ/NirQ/NorQ C-terminal EF-hand_6 PF13405.6 RKO83642.1 - 0.056 13.4 1.8 0.089 12.8 1.8 1.3 1 0 0 1 1 1 0 EF-hand domain EF-hand_5 PF13202.6 RKO83642.1 - 0.15 11.6 0.7 0.24 10.9 0.7 1.4 1 0 0 1 1 1 0 EF hand EF-hand_1 PF00036.32 RKO83642.1 - 0.23 11.1 1.1 0.33 10.6 1.1 1.3 1 0 0 1 1 1 0 EF hand F-box-like PF12937.7 RKO83643.1 - 0.048 13.5 0.3 0.048 13.5 0.3 2.1 3 0 0 3 3 3 0 F-box-like Dynamitin PF04912.14 RKO83644.1 - 3.3e-51 174.8 0.7 3.9e-51 174.6 0.7 1.0 1 0 0 1 1 1 1 Dynamitin BRX_N PF13713.6 RKO83644.1 - 0.021 14.6 0.2 0.72 9.7 0.1 2.4 2 0 0 2 2 2 0 Transcription factor BRX N-terminal domain CLZ PF16526.5 RKO83644.1 - 0.066 13.6 7.0 1.9 8.9 0.6 4.3 4 1 0 4 4 4 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels BLOC1_2 PF10046.9 RKO83644.1 - 0.083 13.2 0.4 11 6.4 0.0 3.5 3 1 1 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Baculo_PEP_C PF04513.12 RKO83644.1 - 0.17 12.0 0.3 18 5.3 0.0 3.0 2 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Snapin_Pallidin PF14712.6 RKO83644.1 - 0.23 11.9 2.4 13 6.3 0.1 3.5 3 1 0 3 3 3 0 Snapin/Pallidin ATG16 PF08614.11 RKO83644.1 - 0.42 10.8 3.9 0.56 10.4 1.1 2.5 2 1 0 2 2 2 0 Autophagy protein 16 (ATG16) SlyX PF04102.12 RKO83644.1 - 0.52 11.0 6.3 38 5.0 0.1 4.5 4 1 0 4 4 4 0 SlyX Gal4_dimer PF03902.13 RKO83644.1 - 0.63 10.2 9.3 0.057 13.6 1.1 3.0 3 1 0 3 3 3 0 Gal4-like dimerisation domain DASH_Hsk3 PF08227.11 RKO83644.1 - 2.7 8.4 4.4 48 4.4 0.3 3.9 4 0 0 4 4 4 0 DASH complex subunit Hsk3 like NPR3 PF03666.13 RKO83645.1 - 0.0053 15.6 0.2 0.0056 15.5 0.2 1.1 1 0 0 1 1 1 1 Nitrogen Permease regulator of amino acid transport activity 3 Kelch_5 PF13854.6 RKO83646.1 - 1.2e-05 25.1 0.3 0.019 15.0 0.0 3.4 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 RKO83646.1 - 2.5e-05 24.4 3.4 0.0032 17.7 0.0 3.4 3 0 0 3 3 3 1 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO83646.1 - 4.5e-05 23.6 1.2 0.00065 19.9 0.0 2.9 3 0 0 3 3 3 1 Kelch motif Kelch_1 PF01344.25 RKO83646.1 - 0.0048 16.4 1.5 0.043 13.4 0.1 2.6 2 1 0 2 2 2 1 Kelch motif Kelch_2 PF07646.15 RKO83646.1 - 0.0066 16.4 0.0 3 8.0 0.0 2.7 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 RKO83646.1 - 0.0092 16.0 8.7 0.049 13.6 0.6 3.3 3 2 0 3 3 3 2 Galactose oxidase, central domain Vault_3 PF17795.1 RKO83646.1 - 0.094 12.8 0.4 0.71 10.0 0.3 2.3 2 1 0 2 2 2 0 Major Vault Protein Repeat domain Asp PF00026.23 RKO83647.1 - 1.6e-06 27.8 3.3 8.6e-05 22.1 3.3 2.4 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO83647.1 - 4.3e-05 23.8 1.4 0.1 12.8 0.3 2.2 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal FCH PF00611.23 RKO83648.1 - 4.9e-08 33.1 0.0 4.9e-08 33.1 0.0 2.5 3 2 0 3 3 3 1 Fes/CIP4, and EFC/F-BAR homology domain HWE_HK PF07536.14 RKO83648.1 - 0.053 14.2 0.4 0.23 12.2 0.4 2.1 1 0 0 1 1 1 0 HWE histidine kinase C1_1 PF00130.22 RKO83648.1 - 0.063 13.2 0.7 0.19 11.7 0.7 1.8 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) BOP1NT PF08145.12 RKO83649.1 - 1.2e-74 251.6 2.5 1.2e-74 251.6 2.5 1.8 2 0 0 2 2 2 1 BOP1NT (NUC169) domain SDA1 PF05285.12 RKO83649.1 - 0.00083 18.9 30.8 0.0011 18.5 30.8 1.2 1 0 0 1 1 1 1 SDA1 BUD22 PF09073.10 RKO83649.1 - 3.9 6.7 38.9 3.8 6.8 37.7 1.6 2 0 0 2 2 2 0 BUD22 Nop14 PF04147.12 RKO83649.1 - 4.9 5.2 42.1 7.6 4.6 42.1 1.2 1 0 0 1 1 1 0 Nop14-like family Suf PF05843.14 RKO83650.1 - 9.2e-10 39.0 0.5 1.1e-09 38.7 0.5 1.0 1 0 0 1 1 1 1 Suppressor of forked protein (Suf) zf-C2H2_9 PF16293.5 RKO83652.1 - 0.022 14.6 0.0 0.04 13.8 0.0 1.4 1 0 0 1 1 1 0 C2H2 type zinc-finger (1 copy) zf-C2H2_6 PF13912.6 RKO83652.1 - 0.027 14.5 0.1 0.044 13.8 0.1 1.3 1 0 0 1 1 1 0 C2H2-type zinc finger zf-met PF12874.7 RKO83652.1 - 0.068 13.6 0.0 0.12 12.8 0.0 1.4 1 0 0 1 1 1 0 Zinc-finger of C2H2 type zf-C2H2_4 PF13894.6 RKO83652.1 - 0.076 13.9 0.1 0.16 12.9 0.1 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2_2 PF12756.7 RKO83652.1 - 0.18 12.1 0.0 0.27 11.6 0.0 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) zf-CCCH PF00642.24 RKO83653.1 - 9.6e-13 47.7 19.1 2.4e-07 30.5 4.2 2.4 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 RKO83653.1 - 1.5e-05 24.9 16.2 0.0037 17.3 1.7 2.4 2 0 0 2 2 2 2 Zinc finger domain oligo_HPY PF08352.12 RKO83653.1 - 0.012 16.1 3.7 0.31 11.6 0.2 2.5 2 0 0 2 2 2 0 Oligopeptide/dipeptide transporter, C-terminal region zf-CCCH_4 PF18044.1 RKO83653.1 - 6.6 6.6 22.3 0.41 10.5 6.4 2.6 3 0 0 3 3 3 0 CCCH-type zinc finger Pkinase PF00069.25 RKO83655.1 - 5.9e-18 65.2 0.0 7.3e-18 64.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 RKO83655.1 - 1e-08 34.4 0.0 1.4e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Pkinase_Tyr PF07714.17 RKO83655.1 - 9.8e-08 31.6 0.0 1.3e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO83655.1 - 0.0082 16.1 0.0 0.019 14.9 0.0 1.5 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 RKO83655.1 - 0.0085 15.1 0.0 0.013 14.5 0.0 1.1 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase DEAD PF00270.29 RKO83656.1 - 6e-16 58.7 0.1 6.9e-16 58.5 0.1 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase EamA PF00892.20 RKO83657.1 - 8.6e-12 45.4 29.6 1e-06 29.0 4.5 2.2 2 0 0 2 2 2 2 EamA-like transporter family PUNUT PF16913.5 RKO83657.1 - 5.4e-05 22.6 1.8 5.4e-05 22.6 1.8 2.0 2 0 0 2 2 2 1 Purine nucleobase transmembrane transport Nuc_sug_transp PF04142.15 RKO83657.1 - 7.2e-05 22.1 0.0 0.00013 21.2 0.0 1.5 1 0 0 1 1 1 1 Nucleotide-sugar transporter TPT PF03151.16 RKO83657.1 - 0.00037 19.9 6.4 0.0015 17.9 6.4 1.8 1 1 0 1 1 1 1 Triose-phosphate Transporter family TMEM234 PF10639.9 RKO83657.1 - 0.93 9.5 9.4 0.54 10.3 1.6 2.3 2 0 0 2 2 2 0 Putative transmembrane family 234 Kelch_5 PF13854.6 RKO83658.1 - 4.3e-25 87.2 8.9 1.2e-07 31.5 0.1 4.3 4 0 0 4 4 4 4 Kelch motif Kelch_3 PF13415.6 RKO83658.1 - 8.9e-25 86.4 22.5 5.8e-06 26.4 0.1 5.4 5 1 0 5 5 5 5 Galactose oxidase, central domain Kelch_4 PF13418.6 RKO83658.1 - 1.2e-22 79.6 14.3 7.7e-09 35.4 0.1 5.5 4 1 1 5 5 5 4 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO83658.1 - 1.2e-22 79.2 8.7 7.1e-06 25.5 0.0 5.2 5 0 0 5 5 5 5 Kelch motif Kelch_2 PF07646.15 RKO83658.1 - 5.5e-21 73.7 3.5 2.6e-05 24.0 0.1 5.1 5 0 0 5 5 5 4 Kelch motif Kelch_6 PF13964.6 RKO83658.1 - 1.1e-17 63.6 6.4 6.1e-05 23.2 0.0 4.9 4 1 1 5 5 5 4 Kelch motif DUF3097 PF11296.8 RKO83658.1 - 0.15 11.2 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3097) SH3_9 PF14604.6 RKO83659.1 - 1.9e-09 37.2 0.0 4.4e-09 36.0 0.0 1.6 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO83659.1 - 4.2e-06 26.3 0.0 6.8e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 RKO83659.1 - 0.026 14.2 0.0 0.053 13.2 0.0 1.5 1 0 0 1 1 1 0 Variant SH3 domain CNH PF00780.22 RKO83663.1 - 1e-08 35.1 0.0 1.5e-08 34.6 0.0 1.2 1 0 0 1 1 1 1 CNH domain MORN PF02493.20 RKO83664.1 - 2.8e-18 64.7 28.4 2e-07 30.5 1.3 5.5 6 0 0 6 6 6 5 MORN repeat Mob1_phocein PF03637.17 RKO83665.1 - 4e-69 232.0 0.2 4.6e-69 231.8 0.2 1.0 1 0 0 1 1 1 1 Mob1/phocein family TFIIB PF00382.19 RKO83666.1 - 1.3e-22 79.6 0.1 1.2e-11 44.4 0.1 2.4 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 RKO83666.1 - 6.9e-05 22.3 1.4 0.00014 21.3 1.4 1.6 1 0 0 1 1 1 1 TFIIB zinc-binding Cyclin_N PF00134.23 RKO83666.1 - 0.035 13.9 0.1 0.056 13.2 0.1 1.4 1 0 0 1 1 1 0 Cyclin, N-terminal domain DZR PF12773.7 RKO83666.1 - 0.081 13.0 1.4 0.096 12.7 0.2 1.7 2 0 0 2 2 2 0 Double zinc ribbon DUF676 PF05057.14 RKO83667.1 - 5.3e-05 22.8 0.0 8e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) DEAD PF00270.29 RKO83668.1 - 6.7e-40 136.7 0.0 1.3e-39 135.8 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 RKO83668.1 - 4.5e-05 23.5 0.0 8.4e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 RKO83668.1 - 0.0094 16.2 0.5 0.043 14.1 0.5 2.1 1 1 0 1 1 1 1 AAA domain DUF3381 PF11861.8 RKO83668.1 - 0.038 13.8 0.3 0.038 13.8 0.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3381) Ada3 PF10198.9 RKO83668.1 - 0.077 13.1 0.8 0.2 11.8 0.8 1.7 1 0 0 1 1 1 0 Histone acetyltransferases subunit 3 Syja_N PF02383.18 RKO83671.1 - 2.9e-44 151.7 0.0 6.5e-44 150.5 0.0 1.3 1 1 0 1 1 1 1 SacI homology domain Chitin_synth_1N PF08407.11 RKO83674.1 - 3.4e-21 75.0 0.0 4.9e-21 74.5 0.0 1.2 1 0 0 1 1 1 1 Chitin synthase N-terminal Chitin_synth_1 PF01644.17 RKO83674.1 - 0.0021 18.0 0.1 0.0027 17.7 0.1 1.1 1 0 0 1 1 1 1 Chitin synthase Defb50 PF17546.2 RKO83675.1 - 0.18 11.7 0.0 0.53 10.2 0.0 1.7 2 0 0 2 2 2 0 Beta defensin 50 adh_short PF00106.25 RKO83676.1 - 8.2e-53 178.8 0.2 1e-52 178.5 0.2 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO83676.1 - 2.2e-41 141.9 0.1 2.9e-41 141.6 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 RKO83676.1 - 2.2e-12 47.2 0.2 3.3e-12 46.7 0.2 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 RKO83676.1 - 0.0087 15.5 0.1 0.013 15.0 0.1 1.4 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family TRP PF06011.12 RKO83677.1 - 1.4e-23 83.4 7.9 8.9e-22 77.4 3.3 3.0 2 1 0 2 2 2 2 Transient receptor potential (TRP) ion channel DUF5316 PF17247.2 RKO83677.1 - 0.047 13.7 0.3 2.1 8.4 0.1 3.1 3 0 0 3 3 3 0 Family of unknown function (DUF5316) TMEM52 PF14979.6 RKO83677.1 - 0.059 13.3 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Transmembrane 52 DUF2157 PF09925.9 RKO83677.1 - 9.9 5.9 15.9 0.63 9.8 0.4 3.6 4 0 0 4 4 4 0 Predicted membrane protein (DUF2157) IGFBP PF00219.18 RKO83678.1 - 1.4e-07 32.1 23.4 0.015 15.9 1.4 5.1 3 2 2 5 5 5 4 Insulin-like growth factor binding protein SLBB PF10531.9 RKO83678.1 - 0.028 14.3 0.1 55 3.7 0.0 4.2 5 0 0 5 5 5 0 SLBB domain Herpes_VP19C PF03327.14 RKO83678.1 - 0.049 13.1 0.1 15 4.9 0.0 3.0 2 1 0 2 2 2 0 Herpesvirus capsid shell protein VP19C Toxin_24 PF08094.11 RKO83678.1 - 0.17 11.8 21.9 4.1 7.3 0.2 5.6 5 0 0 5 5 5 0 Conotoxin TVIIA/GS family Toxin_7 PF05980.12 RKO83678.1 - 0.52 10.6 18.8 22 5.4 0.1 5.9 5 0 0 5 5 5 0 Toxin 7 SCA7 PF08313.12 RKO83678.1 - 0.84 9.6 15.2 36 4.3 0.1 5.1 5 0 0 5 5 5 0 SCA7, zinc-binding domain Opy2 PF09463.10 RKO83678.1 - 4.7 7.6 13.1 12 6.3 0.1 5.4 5 0 0 5 5 5 0 Opy2 protein F-box-like PF12937.7 RKO83679.1 - 0.016 15.1 0.9 0.016 15.1 0.9 2.2 2 0 0 2 2 2 0 F-box-like LRR_6 PF13516.6 RKO83679.1 - 0.059 13.5 0.3 0.66 10.2 0.1 2.5 2 0 0 2 2 2 0 Leucine Rich repeat FAP PF07174.11 RKO83680.1 - 0.00048 19.7 12.1 0.00048 19.7 12.1 2.3 1 1 1 2 2 2 1 Fibronectin-attachment protein (FAP) SOG2 PF10428.9 RKO83680.1 - 0.99 8.5 6.2 0.91 8.6 6.2 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein Profilin PF00235.19 RKO83682.1 - 2.7e-10 40.6 0.0 3.7e-10 40.2 0.0 1.2 1 0 0 1 1 1 1 Profilin DUF2812 PF11193.8 RKO83682.1 - 0.16 12.2 0.0 0.24 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2812) RC-P840_PscD PF10657.9 RKO83683.1 - 0.053 13.6 0.0 0.061 13.4 0.0 1.1 1 0 0 1 1 1 0 Photosystem P840 reaction centre protein PscD Pkinase PF00069.25 RKO83686.1 - 7.9e-38 130.3 0.0 1e-37 130.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO83686.1 - 3.6e-25 88.7 0.0 4.8e-25 88.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO83686.1 - 0.001 19.1 0.1 0.0023 17.9 0.0 1.5 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 RKO83686.1 - 0.069 12.1 0.0 0.08 11.9 0.0 1.1 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase SLC12 PF03522.15 RKO83687.1 - 4e-23 82.1 0.0 7.2e-11 41.8 0.0 3.0 3 0 0 3 3 3 3 Solute carrier family 12 Dynamin_M PF01031.20 RKO83690.1 - 1.3e-29 103.4 0.0 1.5e-29 103.1 0.0 1.1 1 0 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 RKO83690.1 - 1e-07 32.2 0.0 1.9e-07 31.3 0.0 1.4 1 0 0 1 1 1 1 Dynamin family ORF6C PF10552.9 RKO83690.1 - 0.14 12.2 0.0 0.28 11.3 0.0 1.5 1 0 0 1 1 1 0 ORF6C domain Pardaxin PF07425.11 RKO83691.1 - 0.13 11.9 0.2 0.38 10.4 0.0 1.9 2 0 0 2 2 2 0 Pardaxin TLD PF07534.16 RKO83692.1 - 2.2e-32 112.1 0.0 2.5e-32 112.0 0.0 1.0 1 0 0 1 1 1 1 TLD EF-hand_7 PF13499.6 RKO83693.1 - 6.8e-12 45.7 1.9 8.8e-12 45.3 1.9 1.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 RKO83693.1 - 3.7e-11 41.7 1.7 1.3e-06 27.5 0.1 2.3 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 RKO83693.1 - 1.1e-09 37.9 1.5 3.2e-05 23.7 0.2 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 RKO83693.1 - 4.7e-08 32.3 1.7 4.8e-06 26.1 0.1 2.4 2 1 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 RKO83693.1 - 2e-06 27.0 6.4 8.5e-05 21.9 0.1 2.8 2 1 1 3 3 3 2 EF hand EF-hand_9 PF14658.6 RKO83693.1 - 0.073 13.4 0.0 0.099 13.0 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain EF-hand_14 PF17959.1 RKO83693.1 - 0.12 12.8 0.0 0.15 12.4 0.0 1.1 1 0 0 1 1 1 0 EF-hand domain BRE PF06113.12 RKO83694.1 - 8.4e-11 41.3 0.1 1.2e-10 40.8 0.1 1.2 1 0 0 1 1 1 1 Brain and reproductive organ-expressed protein (BRE) Asp PF00026.23 RKO83695.1 - 1.8e-12 47.3 1.0 1.8e-07 30.9 0.0 2.1 2 0 0 2 2 2 2 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO83695.1 - 0.034 14.4 0.0 0.063 13.5 0.0 1.5 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal SYCE1 PF15233.6 RKO83696.1 - 0.37 10.8 9.0 0.71 9.9 9.0 1.4 1 0 0 1 1 1 0 Synaptonemal complex central element protein 1 Glyco_hydro_1 PF00232.18 RKO83697.1 - 2.4e-07 29.6 0.1 3.2e-07 29.1 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 DUF5549 PF17703.1 RKO83697.1 - 0.068 12.8 4.2 0.12 12.1 4.2 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5549) DUF4407 PF14362.6 RKO83698.1 - 0.11 11.8 4.2 0.15 11.4 4.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ATP-synt_B PF00430.18 RKO83698.1 - 0.13 12.4 15.5 0.21 11.7 15.5 1.2 1 0 0 1 1 1 0 ATP synthase B/B' CF(0) Dsh_C PF12316.8 RKO83698.1 - 0.37 11.2 8.6 0.22 11.9 6.8 1.4 2 0 0 2 2 2 0 Segment polarity protein dishevelled (Dsh) C terminal THOC2_N PF16134.5 RKO83698.1 - 0.37 9.4 4.4 0.55 8.8 4.4 1.1 1 0 0 1 1 1 0 THO complex subunit 2 N-terminus Copper-fist PF00649.18 RKO83699.1 - 1.5e-08 34.0 3.6 5.4e-08 32.2 0.9 2.3 2 0 0 2 2 2 2 Copper fist DNA binding domain oligo_HPY PF08352.12 RKO83700.1 - 0.15 12.6 1.3 8.1 7.1 0.1 3.2 4 0 0 4 4 4 0 Oligopeptide/dipeptide transporter, C-terminal region Exo84_C PF16528.5 RKO83701.1 - 2.9e-55 187.3 0.2 4.5e-55 186.7 0.2 1.3 1 0 0 1 1 1 1 Exocyst component 84 C-terminal Sec5 PF15469.6 RKO83701.1 - 0.00013 21.8 0.1 0.00029 20.7 0.1 1.5 1 0 0 1 1 1 1 Exocyst complex component Sec5 Peptidase_S10 PF00450.22 RKO83702.1 - 2.6e-26 93.0 2.3 3.4e-15 56.4 0.1 2.9 2 1 0 2 2 2 2 Serine carboxypeptidase ABC2_membrane PF01061.24 RKO83703.1 - 1.2e-05 24.9 0.2 1.8e-05 24.2 0.2 1.3 1 0 0 1 1 1 1 ABC-2 type transporter AAA_13 PF13166.6 RKO83703.1 - 0.059 12.0 0.0 0.1 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 RKO83703.1 - 0.16 12.5 0.0 0.43 11.1 0.0 1.7 2 0 0 2 2 2 0 ABC transporter UBA PF00627.31 RKO83704.1 - 2e-10 40.3 0.8 6.7e-10 38.7 0.1 2.3 2 1 0 2 2 2 1 UBA/TS-N domain ubiquitin PF00240.23 RKO83704.1 - 1.7e-07 30.9 0.0 3.1e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family STI1 PF17830.1 RKO83704.1 - 8.5e-06 25.6 11.7 0.00031 20.6 5.9 2.7 1 1 1 2 2 2 2 STI1 domain DUF2407 PF10302.9 RKO83704.1 - 0.0028 18.2 0.0 0.0059 17.1 0.0 1.5 1 0 0 1 1 1 1 DUF2407 ubiquitin-like domain Nuc_recep-AF1 PF11825.8 RKO83704.1 - 0.039 14.0 0.1 0.039 14.0 0.1 2.9 2 1 0 2 2 2 0 Nuclear/hormone receptor activator site AF-1 TUG-UBL1 PF11470.8 RKO83704.1 - 0.092 13.0 0.1 0.19 11.9 0.1 1.5 1 0 0 1 1 1 0 TUG ubiquitin-like domain Rad60-SLD_2 PF13881.6 RKO83704.1 - 0.2 11.8 0.0 0.39 10.8 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 RKO83704.1 - 0.2 12.2 0.0 0.41 11.1 0.0 1.5 1 0 0 1 1 1 0 Ubiquitin-like domain GerD PF17898.1 RKO83704.1 - 0.21 11.6 6.7 0.64 10.0 2.6 2.3 1 1 1 2 2 2 0 Spore germination GerD central core domain XPC-binding PF09280.11 RKO83704.1 - 0.43 10.3 5.9 1.2 8.9 0.7 2.8 1 1 1 2 2 2 0 XPC-binding domain TPR_12 PF13424.6 RKO83705.1 - 0.0029 17.9 1.0 0.056 13.7 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 RKO83705.1 - 0.0089 16.0 0.7 0.15 12.2 0.0 2.7 2 1 0 2 2 2 1 Tetratricopeptide repeat GST_N PF02798.20 RKO83706.1 - 2.4e-06 27.8 0.0 5e-06 26.8 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 RKO83706.1 - 0.00048 20.5 0.0 0.00081 19.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 RKO83706.1 - 0.0011 19.2 0.0 0.17 12.1 0.0 2.4 1 1 1 2 2 2 2 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 RKO83706.1 - 0.0042 17.4 0.0 0.008 16.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain WD40 PF00400.32 RKO83709.1 - 6.9e-07 29.9 0.4 0.0012 19.6 0.4 2.9 2 0 0 2 2 2 2 WD domain, G-beta repeat T5orf172 PF10544.9 RKO83710.1 - 0.018 15.6 0.1 0.04 14.4 0.1 1.7 1 0 0 1 1 1 0 T5orf172 domain Stomagen PF16851.5 RKO83710.1 - 0.074 13.1 0.0 0.24 11.5 0.0 1.8 1 0 0 1 1 1 0 Stomagen DUF4611 PF15387.6 RKO83710.1 - 0.09 13.0 1.6 0.16 12.2 0.3 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4611) SCA7 PF08313.12 RKO83711.1 - 1.4e-20 72.9 0.2 1.5e-20 72.9 0.2 1.0 1 0 0 1 1 1 1 SCA7, zinc-binding domain adh_short_C2 PF13561.6 RKO83713.1 - 1.1e-46 159.3 0.2 1.2e-46 159.2 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO83713.1 - 3.1e-32 111.6 0.0 4.3e-32 111.2 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 RKO83713.1 - 0.028 14.3 0.0 0.04 13.8 0.0 1.2 1 0 0 1 1 1 0 KR domain DUF3843 PF12954.7 RKO83713.1 - 0.29 10.1 0.0 0.33 9.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3843) adh_short_C2 PF13561.6 RKO83714.1 - 2.3e-49 168.1 1.0 2.6e-49 167.9 1.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO83714.1 - 8.4e-48 162.4 0.5 9.9e-48 162.2 0.5 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 RKO83714.1 - 5.9e-14 52.4 0.3 7.8e-14 52.0 0.3 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 RKO83714.1 - 0.0001 21.8 0.3 0.0011 18.4 0.3 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family AdoHcyase_NAD PF00670.21 RKO83714.1 - 0.00085 19.4 0.8 0.0017 18.5 0.8 1.6 1 1 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain YjeF_N PF03853.15 RKO83714.1 - 0.0078 16.1 0.1 0.011 15.7 0.1 1.2 1 0 0 1 1 1 1 YjeF-related protein N-terminus THF_DHG_CYH_C PF02882.19 RKO83714.1 - 0.0089 15.4 0.1 0.018 14.4 0.1 1.5 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KdpD PF02702.17 RKO83714.1 - 0.011 15.2 0.1 0.019 14.5 0.1 1.3 1 0 0 1 1 1 0 Osmosensitive K+ channel His kinase sensor domain Enoyl_reductase PF12241.8 RKO83714.1 - 0.021 14.2 0.0 0.042 13.2 0.0 1.5 1 0 0 1 1 1 0 Trans-2-enoyl-CoA reductase catalytic region Polysacc_synt_2 PF02719.15 RKO83714.1 - 0.023 13.9 0.1 0.035 13.2 0.1 1.3 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein Glyco_trans_4_2 PF13477.6 RKO83714.1 - 0.073 13.1 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase 4-like Peripla_BP_4 PF13407.6 RKO83715.1 - 3.8e-09 36.5 0.6 0.0017 18.0 0.1 2.1 2 0 0 2 2 2 2 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 RKO83715.1 - 0.0022 17.5 0.0 0.0064 15.9 0.0 1.7 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family DUF1822 PF08852.11 RKO83716.1 - 0.1 11.6 2.0 0.15 11.1 2.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1822) CDC45 PF02724.14 RKO83716.1 - 0.34 9.1 10.3 0.42 8.8 10.3 1.1 1 0 0 1 1 1 0 CDC45-like protein AAA_11 PF13086.6 RKO83716.1 - 0.9 9.3 14.9 1.6 8.4 14.9 1.4 1 0 0 1 1 1 0 AAA domain Borrelia_P83 PF05262.11 RKO83716.1 - 1 7.8 13.7 1.3 7.4 13.7 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein SprA-related PF12118.8 RKO83716.1 - 1.1 8.3 7.8 1.7 7.7 7.8 1.3 1 0 0 1 1 1 0 SprA-related family V_ATPase_I PF01496.19 RKO83716.1 - 1.8 6.4 5.7 2.2 6.1 5.7 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family NPR3 PF03666.13 RKO83716.1 - 1.9 7.2 8.5 2.6 6.7 8.5 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 DDRGK PF09756.9 RKO83716.1 - 8.4 5.9 31.7 16 5.0 31.7 1.4 1 0 0 1 1 1 0 DDRGK domain Pyr_redox_2 PF07992.14 RKO83717.1 - 1.5e-09 37.5 0.0 0.00019 20.8 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 RKO83717.1 - 0.0048 17.4 0.1 0.63 10.6 0.0 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DOMON PF03351.17 RKO83718.1 - 1.5e-11 44.6 0.1 2.4e-11 43.9 0.1 1.3 1 0 0 1 1 1 1 DOMON domain An_peroxidase PF03098.15 RKO83718.1 - 4.6e-11 42.0 0.0 6.8e-11 41.4 0.0 1.1 1 0 0 1 1 1 1 Animal haem peroxidase Cytochrom_B561 PF03188.16 RKO83718.1 - 3.5e-06 27.2 1.3 8.3e-06 26.0 1.2 1.6 1 1 0 1 1 1 1 Eukaryotic cytochrome b561 SdpI PF13630.6 RKO83718.1 - 0.84 9.8 7.2 0.35 11.0 0.2 3.2 3 0 0 3 3 3 0 SdpI/YhfL protein family AAA_30 PF13604.6 RKO83719.1 - 0.053 13.2 0.2 0.089 12.5 0.2 1.3 1 0 0 1 1 1 0 AAA domain Herpes_Helicase PF02689.14 RKO83719.1 - 0.068 11.1 0.0 0.1 10.5 0.0 1.2 1 0 0 1 1 1 0 Helicase UvrD_C_2 PF13538.6 RKO83719.1 - 0.092 12.6 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain WD40 PF00400.32 RKO83720.1 - 6.4e-11 42.6 9.2 0.0018 19.1 0.0 5.4 5 1 0 5 5 5 3 WD domain, G-beta repeat Nucleoporin_N PF08801.11 RKO83720.1 - 0.064 12.0 0.0 2.7 6.6 0.0 2.6 2 1 1 3 3 3 0 Nup133 N terminal like DAGK_cat PF00781.24 RKO83720.1 - 3.9 7.1 5.8 0.55 9.9 0.4 2.1 2 0 0 2 2 2 0 Diacylglycerol kinase catalytic domain F-box-like PF12937.7 RKO83721.1 - 0.00025 20.9 1.5 0.00044 20.1 1.5 1.4 1 0 0 1 1 1 1 F-box-like TPR_14 PF13428.6 RKO83722.1 - 0.00082 20.0 2.2 1.9 9.5 0.0 3.7 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 RKO83722.1 - 0.021 14.9 0.1 2 8.7 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO83722.1 - 0.053 14.2 4.0 2.1 9.1 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat CDV3 PF15359.6 RKO83724.1 - 5.3 7.5 11.2 12 6.4 11.2 1.7 1 1 0 1 1 1 0 Carnitine deficiency-associated protein 3 ABC_tran PF00005.27 RKO83725.1 - 1.6e-14 54.6 0.0 2.4e-14 54.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter ABC2_membrane PF01061.24 RKO83725.1 - 2.6e-10 40.1 1.9 3.9e-10 39.5 1.9 1.1 1 0 0 1 1 1 1 ABC-2 type transporter T2SSE PF00437.20 RKO83725.1 - 0.0002 20.5 0.0 0.00028 20.1 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC2_membrane_3 PF12698.7 RKO83725.1 - 0.00026 20.2 2.7 0.00036 19.8 2.7 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein AAA_10 PF12846.7 RKO83725.1 - 0.00039 19.4 0.0 0.00059 18.9 0.0 1.2 1 0 0 1 1 1 1 AAA-like domain RsgA_GTPase PF03193.16 RKO83725.1 - 0.00049 20.1 0.2 0.0008 19.3 0.2 1.2 1 0 0 1 1 1 1 RsgA GTPase TrwB_AAD_bind PF10412.9 RKO83725.1 - 0.00054 19.0 0.1 0.00078 18.5 0.1 1.1 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain AAA_30 PF13604.6 RKO83725.1 - 0.00064 19.5 0.9 0.004 16.9 0.1 2.3 3 0 0 3 3 3 1 AAA domain AAA_16 PF13191.6 RKO83725.1 - 0.0025 18.2 0.0 0.0048 17.3 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 RKO83725.1 - 0.011 16.0 0.0 0.026 14.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 RKO83725.1 - 0.036 14.6 0.2 0.062 13.8 0.2 1.3 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 RKO83725.1 - 0.039 13.7 0.4 0.077 12.7 0.4 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Thymidylate_kin PF02223.17 RKO83725.1 - 0.058 13.1 0.0 0.08 12.6 0.0 1.2 1 0 0 1 1 1 0 Thymidylate kinase ABC2_membrane_2 PF12679.7 RKO83725.1 - 0.097 11.9 2.1 0.33 10.2 2.9 1.5 1 1 0 1 1 1 0 ABC-2 family transporter protein cobW PF02492.19 RKO83725.1 - 0.1 12.1 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase PF06745.13 RKO83725.1 - 0.13 11.5 0.1 0.2 11.0 0.1 1.2 1 0 0 1 1 1 0 KaiC RecA PF00154.21 RKO83725.1 - 0.15 11.5 0.0 0.22 10.9 0.0 1.2 1 0 0 1 1 1 0 recA bacterial DNA recombination protein AAA_24 PF13479.6 RKO83725.1 - 0.19 11.5 0.1 0.28 10.9 0.1 1.2 1 0 0 1 1 1 0 AAA domain adh_short_C2 PF13561.6 RKO83726.1 - 1.2e-39 136.2 0.1 1.4e-39 136.0 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO83726.1 - 2.4e-33 115.3 0.0 2.9e-33 115.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 RKO83726.1 - 9.3e-08 32.2 1.4 3.2e-07 30.5 1.4 1.8 1 1 0 1 1 1 1 KR domain YjeF_N PF03853.15 RKO83726.1 - 0.072 13.0 0.1 0.12 12.2 0.1 1.3 1 0 0 1 1 1 0 YjeF-related protein N-terminus PhoLip_ATPase_C PF16212.5 RKO83727.1 - 2e-72 244.0 18.8 2.6e-72 243.6 18.8 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Cation_ATPase PF13246.6 RKO83727.1 - 2.4e-09 37.1 0.0 9.5e-09 35.2 0.0 2.0 2 0 0 2 2 2 1 Cation transport ATPase (P-type) Hydrolase PF00702.26 RKO83727.1 - 1.2e-08 35.5 0.2 0.00063 20.1 0.0 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 RKO83727.1 - 0.0034 17.2 0.0 0.0088 15.8 0.0 1.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Caleosin PF05042.13 RKO83730.1 - 1e-71 240.3 0.2 1.2e-71 240.1 0.2 1.0 1 0 0 1 1 1 1 Caleosin related protein EF-hand_6 PF13405.6 RKO83730.1 - 3.5e-05 23.4 0.1 0.015 15.2 0.3 2.5 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 RKO83730.1 - 8.1e-05 21.9 0.8 0.0014 18.0 0.3 2.4 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 RKO83730.1 - 0.00022 21.6 0.0 0.004 17.6 0.0 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_8 PF13833.6 RKO83730.1 - 0.00042 20.1 0.2 0.0019 18.0 0.1 2.1 2 0 0 2 2 2 1 EF-hand domain pair Aldedh PF00171.22 RKO83733.1 - 8.8e-09 34.4 0.0 9.6e-09 34.3 0.0 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Aldo_ket_red PF00248.21 RKO83734.1 - 1.1e-65 221.7 0.0 1.3e-65 221.5 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family DEAD PF00270.29 RKO83735.1 - 2.2e-43 148.0 0.0 3.1e-43 147.6 0.0 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 RKO83735.1 - 8.6e-06 25.9 0.0 1.3e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 RKO83735.1 - 0.025 14.9 0.0 0.04 14.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain CMS1 PF14617.6 RKO83735.1 - 0.029 13.7 0.0 0.045 13.1 0.0 1.2 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit NAD_binding_3 PF03447.16 RKO83735.1 - 0.065 13.9 0.1 8.2 7.1 0.0 3.0 3 0 0 3 3 3 0 Homoserine dehydrogenase, NAD binding domain AAA_22 PF13401.6 RKO83735.1 - 0.077 13.3 1.3 1.2 9.4 1.3 2.7 1 1 0 1 1 1 0 AAA domain Helicase_C PF00271.31 RKO83735.1 - 0.17 12.2 0.0 0.51 10.7 0.0 1.8 1 0 0 1 1 1 0 Helicase conserved C-terminal domain zf-RING_2 PF13639.6 RKO83737.1 - 1.8e-14 53.8 6.5 3.3e-14 52.9 6.5 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 RKO83737.1 - 2e-10 40.2 3.6 4.2e-10 39.2 3.6 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 RKO83737.1 - 1.9e-09 37.2 5.6 3.9e-09 36.2 5.6 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO83737.1 - 1.4e-08 34.5 4.2 2.4e-08 33.7 4.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 RKO83737.1 - 3.2e-07 30.5 6.7 2.5e-06 27.7 6.7 2.2 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 RKO83737.1 - 3.4e-07 30.1 2.6 5.9e-07 29.3 2.6 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 RKO83737.1 - 4.6e-06 26.5 3.1 4.6e-06 26.5 3.1 1.8 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 RKO83737.1 - 0.00013 21.8 2.9 0.00022 21.0 2.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 RKO83737.1 - 0.00017 21.6 1.7 0.00033 20.7 1.7 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 RKO83737.1 - 0.0044 17.1 5.7 0.009 16.2 5.7 1.5 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-Nse PF11789.8 RKO83737.1 - 0.011 15.5 4.1 0.021 14.6 4.1 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Prok-RING_4 PF14447.6 RKO83737.1 - 0.013 15.4 4.5 0.026 14.4 4.5 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 RINGv PF12906.7 RKO83737.1 - 0.032 14.3 2.9 0.068 13.3 2.9 1.6 1 0 0 1 1 1 0 RING-variant domain Zn_ribbon_17 PF17120.5 RKO83737.1 - 0.083 12.5 1.4 0.18 11.4 1.4 1.6 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_4 PF14570.6 RKO83737.1 - 0.18 11.6 3.3 0.35 10.7 3.3 1.5 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING-like PF08746.11 RKO83737.1 - 0.8 10.1 2.9 1.8 9.0 2.9 1.6 1 0 0 1 1 1 0 RING-like domain HTH_17 PF12728.7 RKO83738.1 - 0.029 14.5 0.0 0.048 13.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Thiolase_N PF00108.23 RKO83742.1 - 7.5e-43 146.8 1.1 8.6e-43 146.6 1.1 1.0 1 0 0 1 1 1 1 Thiolase, N-terminal domain ketoacyl-synt PF00109.26 RKO83742.1 - 1.5e-06 28.0 2.4 0.00075 19.1 0.5 2.0 1 1 1 2 2 2 2 Beta-ketoacyl synthase, N-terminal domain PHD_3 PF13922.6 RKO83742.1 - 0.12 12.8 0.0 0.2 12.1 0.0 1.4 1 0 0 1 1 1 0 PHD domain of transcriptional enhancer, Asx p450 PF00067.22 RKO83743.1 - 6e-53 180.2 0.0 3.6e-29 101.8 0.0 2.0 2 0 0 2 2 2 2 Cytochrome P450 AAA_16 PF13191.6 RKO83744.1 - 4.8e-12 46.6 0.0 7.8e-12 45.9 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain ORC5_C PF14630.6 RKO83744.1 - 1.1e-11 44.8 0.0 1.4e-11 44.5 0.0 1.1 1 0 0 1 1 1 1 Origin recognition complex (ORC) subunit 5 C-terminus AAA_22 PF13401.6 RKO83744.1 - 4.9e-05 23.6 0.0 0.00035 20.9 0.0 2.3 3 0 0 3 3 3 1 AAA domain TniB PF05621.11 RKO83744.1 - 0.00032 20.2 0.0 0.00053 19.5 0.0 1.3 1 0 0 1 1 1 1 Bacterial TniB protein T2SSE PF00437.20 RKO83744.1 - 0.0014 17.7 0.0 0.0022 17.1 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_7 PF12775.7 RKO83744.1 - 0.011 15.2 0.0 0.017 14.6 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region SRPRB PF09439.10 RKO83744.1 - 0.024 14.1 0.0 0.038 13.4 0.0 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_11 PF13086.6 RKO83744.1 - 0.049 13.4 0.0 0.25 11.1 0.0 1.9 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 RKO83744.1 - 0.051 14.0 0.0 5.1 7.5 0.0 2.3 2 0 0 2 2 2 0 RNA helicase AAA_14 PF13173.6 RKO83744.1 - 0.065 13.3 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 RKO83744.1 - 0.089 13.3 0.0 0.14 12.7 0.0 1.4 1 0 0 1 1 1 0 ABC transporter AAA_18 PF13238.6 RKO83744.1 - 0.11 13.0 0.0 0.18 12.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 RKO83744.1 - 0.12 12.1 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 RKO83744.1 - 0.13 12.1 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_35 PF14516.6 RKO83744.1 - 0.22 10.3 0.0 0.3 9.9 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain AAA_23 PF13476.6 RKO83744.1 - 0.25 11.8 0.0 0.38 11.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain FCH PF00611.23 RKO83745.1 - 0.01 16.1 0.6 0.064 13.6 0.0 2.6 3 0 0 3 3 3 0 Fes/CIP4, and EFC/F-BAR homology domain R3H-assoc PF13902.6 RKO83745.1 - 0.12 12.7 0.8 0.37 11.2 0.2 2.0 2 0 0 2 2 2 0 R3H-associated N-terminal domain MRPL52 PF18699.1 RKO83745.1 - 0.13 12.4 1.1 0.43 10.8 1.1 1.9 1 0 0 1 1 1 0 Mitoribosomal protein mL52 CEP63 PF17045.5 RKO83745.1 - 0.14 12.0 3.1 0.17 11.8 1.0 2.0 2 0 0 2 2 2 0 Centrosomal protein of 63 kDa CDC50 PF03381.15 RKO83747.1 - 3.7e-87 292.4 0.6 4.4e-87 292.2 0.6 1.1 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family Gluconate_2-dh3 PF13618.6 RKO83748.1 - 0.05 13.8 0.1 0.086 13.1 0.1 1.4 1 0 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 Piwi PF02171.17 RKO83749.1 - 7.9e-85 284.7 0.0 8.8e-85 284.6 0.0 1.0 1 0 0 1 1 1 1 Piwi domain GRAM PF02893.20 RKO83750.1 - 4.4e-19 68.4 0.2 6.2e-19 68.0 0.2 1.2 1 0 0 1 1 1 1 GRAM domain Vps36_ESCRT-II PF11605.8 RKO83750.1 - 0.02 15.1 0.0 0.034 14.3 0.0 1.3 1 0 0 1 1 1 0 Vacuolar protein sorting protein 36 Vps36 UPF0560 PF10577.9 RKO83750.1 - 0.17 10.3 2.7 0.23 9.9 2.7 1.0 1 0 0 1 1 1 0 Uncharacterised protein family UPF0560 Nucleopor_Nup85 PF07575.13 RKO83751.1 - 5.5e-39 134.2 0.8 6.4e-39 134.0 0.8 1.0 1 0 0 1 1 1 1 Nup85 Nucleoporin SAP30_Sin3_bdg PF13867.6 RKO83752.1 - 1.8e-15 57.0 0.1 3.1e-15 56.2 0.1 1.4 1 0 0 1 1 1 1 Sin3 binding region of histone deacetylase complex subunit SAP30 Pox_polyA_pol PF03296.13 RKO83752.1 - 0.14 12.0 0.1 0.19 11.6 0.1 1.1 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase nucleotidyltransferase domain TPPII_N PF12583.8 RKO83752.1 - 0.18 12.4 10.1 0.23 12.0 10.1 1.2 1 0 0 1 1 1 0 Tripeptidyl peptidase II N terminal CCDC53 PF10152.9 RKO83752.1 - 1.1 9.7 3.8 1.4 9.3 3.8 1.2 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex RNA_pol_L_2 PF13656.6 RKO83753.1 - 1.1e-18 66.8 0.0 1.3e-18 66.5 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 RKO83753.1 - 1.6e-06 27.4 0.0 2.3e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Nse4_C PF08743.10 RKO83754.1 - 8.3e-17 61.2 0.2 2.3e-16 59.8 0.0 1.9 2 0 0 2 2 2 1 Nse4 C-terminal Nse4-Nse3_bdg PF15412.6 RKO83754.1 - 1.2e-09 38.2 1.1 2.5e-09 37.1 1.1 1.6 1 0 0 1 1 1 1 Binding domain of Nse4/EID3 to Nse3-MAGE PGBA_C PF15437.6 RKO83754.1 - 0.22 11.9 3.3 0.48 10.8 3.3 1.7 1 0 0 1 1 1 0 Plasminogen-binding protein pgbA C-terminal DUF3827 PF12877.7 RKO83755.1 - 0.033 12.6 0.3 0.033 12.6 0.3 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3827) PPR PF01535.20 RKO83761.1 - 5.2e-07 29.5 0.7 17 5.9 0.0 9.0 11 0 0 11 11 11 1 PPR repeat PPR_2 PF13041.6 RKO83761.1 - 3.9e-06 27.0 0.0 14 6.0 0.0 6.7 8 1 0 8 8 8 2 PPR repeat family TPR_14 PF13428.6 RKO83761.1 - 0.00068 20.2 28.1 1 10.4 0.1 8.8 7 2 2 9 9 9 3 Tetratricopeptide repeat TPR_7 PF13176.6 RKO83761.1 - 0.0093 15.9 0.4 0.55 10.4 0.0 3.6 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_19 PF14559.6 RKO83761.1 - 0.0098 16.4 15.9 2 9.0 0.0 6.7 6 2 2 8 8 8 2 Tetratricopeptide repeat PPR_long PF17177.4 RKO83761.1 - 0.017 14.5 0.1 3.5 6.9 0.0 2.7 2 1 0 3 3 3 0 Pentacotripeptide-repeat region of PRORP Glycoprot_B_PH1 PF17416.2 RKO83761.1 - 0.079 12.6 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus Glycoprotein B PhoLip_ATPase_N PF16209.5 RKO83762.1 - 1.2e-21 76.2 0.6 2.6e-21 75.1 0.6 1.6 1 0 0 1 1 1 1 Phospholipid-translocating ATPase N-terminal E1-E2_ATPase PF00122.20 RKO83762.1 - 1.1e-11 44.6 0.0 8.1e-11 41.8 0.0 2.1 1 1 0 1 1 1 1 E1-E2 ATPase MIF4G PF02854.19 RKO83764.1 - 4.5e-10 39.5 0.0 4.8e-10 39.4 0.0 1.0 1 0 0 1 1 1 1 MIF4G domain GUN4 PF05419.12 RKO83764.1 - 0.018 15.1 0.0 0.021 14.9 0.0 1.1 1 0 0 1 1 1 0 GUN4-like BetR PF08667.10 RKO83764.1 - 0.14 12.2 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 BetR domain PIG-L PF02585.17 RKO83766.1 - 1.9e-27 96.5 0.0 2.6e-27 96.0 0.0 1.1 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase Sas10_Utp3 PF04000.15 RKO83767.1 - 3.1e-16 59.7 4.2 5e-16 59.1 1.3 2.3 2 0 0 2 2 2 1 Sas10/Utp3/C1D family HlyD_D23 PF16576.5 RKO83767.1 - 0.072 12.3 0.2 0.11 11.6 0.2 1.2 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion ArgoN PF16486.5 RKO83770.1 - 4e-09 37.2 0.0 4.8e-09 36.9 0.0 1.1 1 0 0 1 1 1 1 N-terminal domain of argonaute WD40 PF00400.32 RKO83771.1 - 3.3e-27 94.2 19.9 5.2e-06 27.1 0.5 6.1 5 1 1 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO83771.1 - 2.5e-10 40.5 0.2 0.027 14.8 0.0 4.1 2 1 1 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO83771.1 - 7.3e-05 21.6 0.1 0.28 9.8 0.0 2.3 1 1 1 2 2 2 2 Nucleoporin Nup120/160 Ge1_WD40 PF16529.5 RKO83771.1 - 0.00017 20.7 0.1 0.0041 16.1 0.0 2.4 1 1 0 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein eIF2A PF08662.11 RKO83771.1 - 0.00048 20.1 0.0 0.066 13.1 0.0 2.3 1 1 1 2 2 2 2 Eukaryotic translation initiation factor eIF2A WD40_like PF17005.5 RKO83771.1 - 0.019 14.3 0.4 0.81 8.9 0.1 2.7 1 1 0 2 2 2 0 WD40-like domain Cytotoxic PF09000.10 RKO83771.1 - 0.042 14.2 0.0 1.2 9.5 0.0 2.8 3 0 0 3 3 3 0 Cytotoxic PSS PF03034.15 RKO83774.1 - 1.4e-67 228.3 7.9 2.1e-67 227.8 7.9 1.2 1 0 0 1 1 1 1 Phosphatidyl serine synthase Peptidase_S10 PF00450.22 RKO83774.1 - 1.4e-37 130.2 0.2 1.8e-37 129.7 0.2 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase WLM PF08325.10 RKO83775.1 - 3.3e-37 128.4 0.0 3.7e-37 128.3 0.0 1.0 1 0 0 1 1 1 1 WLM domain DUF790 PF05626.11 RKO83778.1 - 0.07 11.8 0.0 0.095 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF790) PP2C PF00481.21 RKO83779.1 - 5.4e-28 98.3 0.0 7.9e-28 97.8 0.0 1.3 1 0 0 1 1 1 1 Protein phosphatase 2C Fasciclin PF02469.22 RKO83780.1 - 0.00027 21.2 1.4 0.00027 21.2 1.4 2.1 2 0 0 2 2 2 1 Fasciclin domain Suf PF05843.14 RKO83780.1 - 0.11 12.4 4.4 0.14 12.1 4.4 1.0 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) HHV-5_US34A PF17087.5 RKO83780.1 - 0.22 11.7 1.3 0.34 11.1 1.3 1.2 1 0 0 1 1 1 0 Herpesvirus US34A protein family CDC27 PF09507.10 RKO83780.1 - 0.23 10.8 13.1 0.27 10.6 13.1 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Herpes_capsid PF06112.11 RKO83780.1 - 0.33 11.0 10.0 0.52 10.4 10.0 1.4 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein SWI-SNF_Ssr4 PF08549.10 RKO83780.1 - 0.43 9.2 6.0 0.54 8.8 6.0 1.1 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) FSA_C PF10479.9 RKO83780.1 - 1.4 6.9 18.6 1.7 6.7 18.6 1.3 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus CCDC53 PF10152.9 RKO83780.1 - 7.2 7.0 10.2 6.7 7.1 5.1 2.0 1 1 1 2 2 2 0 Subunit CCDC53 of WASH complex TALPID3 PF15324.6 RKO83780.1 - 8.7 3.9 30.1 10 3.6 30.1 1.0 1 0 0 1 1 1 0 Hedgehog signalling target DNA_pol_phi PF04931.13 RKO83783.1 - 8.2 4.4 8.1 3.9 5.5 5.4 1.6 2 0 0 2 2 2 0 DNA polymerase phi F-box-like PF12937.7 RKO83784.1 - 0.067 13.1 0.2 0.18 11.7 0.2 1.7 1 0 0 1 1 1 0 F-box-like Pkinase_Tyr PF07714.17 RKO83785.1 - 4.7e-05 22.8 0.0 6.6e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase AT_hook PF02178.19 RKO83787.1 - 0.077 12.9 0.5 0.077 12.9 0.5 6.8 7 0 0 7 7 7 0 AT hook motif F-box PF00646.33 RKO83789.1 - 0.00011 21.9 1.5 0.0014 18.5 0.3 2.5 2 0 0 2 2 2 1 F-box domain F-box-like PF12937.7 RKO83789.1 - 0.18 11.7 4.3 0.15 11.9 1.6 2.2 2 0 0 2 2 2 0 F-box-like SWIRM PF04433.17 RKO83791.1 - 9.2e-12 45.1 0.0 1.7e-11 44.3 0.0 1.4 1 0 0 1 1 1 1 SWIRM domain Myb_DNA-binding PF00249.31 RKO83791.1 - 6.1e-11 42.3 0.2 1.4e-10 41.2 0.2 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO83791.1 - 1.8e-07 31.3 0.1 3.4e-07 30.4 0.1 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain SLIDE PF09111.10 RKO83791.1 - 0.013 15.5 0.0 0.023 14.7 0.0 1.2 1 0 0 1 1 1 0 SLIDE GCS PF03074.16 RKO83792.1 - 2e-163 544.0 0.0 3.1e-163 543.4 0.0 1.3 1 1 0 1 1 1 1 Glutamate-cysteine ligase GCS2 PF04107.13 RKO83792.1 - 0.05 12.9 0.0 0.085 12.2 0.0 1.3 1 0 0 1 1 1 0 Glutamate-cysteine ligase family 2(GCS2) Barwin PF00967.17 RKO83793.1 - 0.0006 19.6 1.1 0.00073 19.4 1.1 1.2 1 0 0 1 1 1 1 Barwin family Fer4_2 PF12797.7 RKO83793.1 - 0.58 10.4 5.6 13 6.1 0.2 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain IBN_N PF03810.19 RKO83797.1 - 3.7e-13 49.2 0.2 6.4e-12 45.2 0.0 2.5 2 0 0 2 2 2 1 Importin-beta N-terminal domain Cse1 PF08506.10 RKO83797.1 - 1.7e-06 27.1 0.0 3.8e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 Cse1 Xpo1 PF08389.12 RKO83797.1 - 0.0022 18.1 0.2 0.011 15.8 0.0 2.1 2 1 0 2 2 2 1 Exportin 1-like protein Adaptin_N PF01602.20 RKO83797.1 - 0.025 13.2 0.7 0.043 12.4 0.7 1.3 1 0 0 1 1 1 0 Adaptin N terminal region Ipi1_N PF12333.8 RKO83797.1 - 0.03 14.9 0.1 0.15 12.7 0.0 2.2 2 1 1 3 3 3 0 Rix1 complex component involved in 60S ribosome maturation FANCI_S4 PF14678.6 RKO83797.1 - 0.13 11.4 0.0 0.24 10.5 0.0 1.4 1 0 0 1 1 1 0 FANCI solenoid 4 BAR PF03114.18 RKO83798.1 - 6e-48 163.6 1.5 7.4e-48 163.3 1.5 1.1 1 0 0 1 1 1 1 BAR domain BAR_3 PF16746.5 RKO83798.1 - 9.9e-07 28.7 0.1 1.6e-06 28.1 0.1 1.3 1 0 0 1 1 1 1 BAR domain of APPL family Arfaptin PF06456.13 RKO83798.1 - 0.0062 16.1 1.7 0.012 15.3 1.7 1.5 1 1 0 1 1 1 1 Arfaptin-like domain DUF99 PF01949.16 RKO83798.1 - 0.045 13.2 0.2 0.085 12.3 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function DUF99 Gp-FAR-1 PF05823.12 RKO83798.1 - 0.064 13.6 0.8 0.13 12.6 0.2 1.8 2 0 0 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) IFT57 PF10498.9 RKO83798.1 - 0.069 12.1 1.2 0.13 11.2 0.4 1.7 2 0 0 2 2 2 0 Intra-flagellar transport protein 57 baeRF_family5 PF18846.1 RKO83798.1 - 0.1 12.8 0.5 0.25 11.5 0.5 1.6 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 5 OrfB_IS605 PF01385.19 RKO83798.1 - 0.11 12.7 1.0 1.3 9.3 0.4 2.3 2 0 0 2 2 2 0 Probable transposase Usp PF00582.26 RKO83799.1 - 2.1e-06 28.3 0.1 3.6e-06 27.5 0.0 1.4 2 0 0 2 2 2 1 Universal stress protein family ARGLU PF15346.6 RKO83800.1 - 0.33 10.8 3.0 0.47 10.3 3.0 1.3 1 0 0 1 1 1 0 Arginine and glutamate-rich 1 PFK PF00365.20 RKO83802.1 - 8.4e-135 448.6 0.1 3.7e-78 262.7 0.0 2.1 2 0 0 2 2 2 2 Phosphofructokinase UVR PF02151.19 RKO83802.1 - 0.11 12.3 0.3 0.23 11.3 0.3 1.4 1 0 0 1 1 1 0 UvrB/uvrC motif NAD_kinase PF01513.21 RKO83802.1 - 0.12 11.6 0.1 0.21 10.7 0.1 1.4 1 0 0 1 1 1 0 ATP-NAD kinase Pirin_C PF05726.13 RKO83803.1 - 1.1e-16 61.1 0.0 1.2e-16 60.9 0.0 1.1 1 0 0 1 1 1 1 Pirin C-terminal cupin domain Entericidin PF08085.11 RKO83803.1 - 0.045 13.8 0.2 0.068 13.2 0.2 1.3 1 0 0 1 1 1 0 Entericidin EcnA/B family ATP-synt_ab PF00006.25 RKO83806.1 - 2.1e-18 66.7 0.0 4.9e-18 65.6 0.0 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain DUF4336 PF14234.6 RKO83807.1 - 0.045 12.9 0.0 0.07 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4336) Redoxin PF08534.10 RKO83808.1 - 0.12 12.1 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Redoxin DNA_pol_A PF00476.20 RKO83809.1 - 5.9e-48 163.8 0.0 8.2e-48 163.3 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family A DNA_pol_A_exo1 PF01612.20 RKO83809.1 - 0.18 11.5 0.0 0.38 10.4 0.0 1.5 1 0 0 1 1 1 0 3'-5' exonuclease Oxidored_FMN PF00724.20 RKO83810.1 - 1.7e-60 205.1 0.0 2.1e-60 204.8 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family CBM_25 PF03423.13 RKO83810.1 - 0.054 13.8 0.1 0.14 12.4 0.1 1.8 1 0 0 1 1 1 0 Carbohydrate binding domain (family 25) Gas_vesicle_C PF01304.17 RKO83810.1 - 0.14 12.1 0.2 0.23 11.5 0.2 1.3 1 0 0 1 1 1 0 Gas vesicles protein GVPc repeated domain PCI PF01399.27 RKO83812.1 - 1.3e-11 44.9 0.0 2.3e-11 44.1 0.0 1.3 1 0 0 1 1 1 1 PCI domain DUF2061 PF09834.9 RKO83817.1 - 0.068 13.7 0.3 0.14 12.7 0.3 1.6 1 0 0 1 1 1 0 Predicted membrane protein (DUF2061) Kelch_3 PF13415.6 RKO83819.1 - 9.7e-25 86.3 7.3 2.5e-12 46.7 0.7 4.0 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO83819.1 - 1.7e-23 82.1 0.2 1.5e-05 24.9 0.0 4.2 4 0 0 4 4 4 4 Kelch motif Kelch_4 PF13418.6 RKO83819.1 - 1.6e-21 76.0 10.4 2.6e-10 40.1 0.4 4.5 4 1 0 4 4 4 3 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO83819.1 - 2.5e-20 71.8 0.5 1.2e-09 37.6 0.1 4.0 4 0 0 4 4 4 3 Kelch motif Kelch_6 PF13964.6 RKO83819.1 - 2.8e-19 68.7 2.3 3.8e-09 36.5 0.1 4.1 4 1 0 4 4 4 3 Kelch motif Kelch_2 PF07646.15 RKO83819.1 - 6.4e-15 54.4 8.2 1.3e-07 31.3 0.3 4.4 4 1 0 4 4 4 3 Kelch motif Cyclin PF08613.11 RKO83820.1 - 0.0039 17.6 0.0 0.0053 17.1 0.0 1.2 1 0 0 1 1 1 1 Cyclin DUF724 PF05266.14 RKO83821.1 - 0.015 15.1 2.7 0.015 15.1 2.7 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF724) TPR_MLP1_2 PF07926.12 RKO83821.1 - 0.015 15.3 50.3 0.31 11.1 25.8 3.4 1 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein Laminin_B PF00052.18 RKO83821.1 - 0.017 15.0 1.5 0.044 13.7 1.5 1.7 1 0 0 1 1 1 0 Laminin B (Domain IV) YojJ PF10372.9 RKO83821.1 - 0.1 12.7 0.4 0.1 12.7 0.4 3.8 4 1 1 5 5 4 0 Bacterial membrane-spanning protein N-terminus Jnk-SapK_ap_N PF09744.9 RKO83821.1 - 0.15 12.3 46.7 0.042 14.1 15.1 3.4 1 1 2 3 3 2 0 JNK_SAPK-associated protein-1 Filament PF00038.21 RKO83821.1 - 0.16 11.5 44.6 0.044 13.4 12.5 3.1 1 1 2 3 3 3 0 Intermediate filament protein Img2 PF05046.14 RKO83821.1 - 0.28 11.5 1.8 1.1 9.6 0.1 2.6 1 1 0 2 2 2 0 Mitochondrial large subunit ribosomal protein (Img2) TACC_C PF05010.14 RKO83821.1 - 0.33 10.7 36.2 0.041 13.7 9.1 3.6 1 1 2 3 3 3 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal FlaC_arch PF05377.11 RKO83821.1 - 0.35 11.3 0.2 0.35 11.3 0.2 5.5 2 2 3 5 5 5 0 Flagella accessory protein C (FlaC) DUF4472 PF14739.6 RKO83821.1 - 0.53 11.1 35.9 1.1 10.1 8.7 4.5 1 1 3 4 4 4 0 Domain of unknown function (DUF4472) Bacillus_HBL PF05791.11 RKO83821.1 - 0.64 9.8 23.7 0.21 11.4 1.0 3.9 1 1 3 4 4 4 0 Bacillus haemolytic enterotoxin (HBL) Tropomyosin_1 PF12718.7 RKO83821.1 - 0.73 10.0 47.2 0.035 14.3 16.6 3.6 1 1 2 3 3 2 0 Tropomyosin like WXG100 PF06013.12 RKO83821.1 - 1.5 9.1 19.9 7.3 6.9 0.2 4.4 3 2 1 4 4 4 0 Proteins of 100 residues with WXG bZIP_1 PF00170.21 RKO83821.1 - 1.7 8.8 37.3 0.048 13.8 2.7 6.1 4 2 2 6 6 6 0 bZIP transcription factor DUF1664 PF07889.12 RKO83821.1 - 1.7 8.7 27.6 1 9.4 2.5 4.6 1 1 5 6 6 6 0 Protein of unknown function (DUF1664) GAS PF13851.6 RKO83821.1 - 2.3 7.5 45.3 1.7 7.9 10.0 3.1 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding Golgin_A5 PF09787.9 RKO83821.1 - 2.5 7.5 45.6 0.87 9.0 17.8 2.1 1 1 1 2 2 2 0 Golgin subfamily A member 5 HALZ PF02183.18 RKO83821.1 - 5.5 7.3 19.3 2.2 8.6 1.3 4.3 4 1 0 4 4 4 0 Homeobox associated leucine zipper Fzo_mitofusin PF04799.13 RKO83821.1 - 6.1 6.4 26.6 0.52 9.8 5.1 3.7 1 1 2 4 4 4 0 fzo-like conserved region Spc7 PF08317.11 RKO83821.1 - 6.4 5.6 44.5 3 6.6 17.2 2.3 1 1 1 2 2 2 0 Spc7 kinetochore protein SH3_9 PF14604.6 RKO83823.1 - 2.6e-10 40.0 0.0 1.1e-09 38.0 0.0 1.9 2 0 0 2 2 2 1 Variant SH3 domain Septin PF00735.18 RKO83823.1 - 5.4e-10 39.0 0.0 7.8e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 Septin SH3_1 PF00018.28 RKO83823.1 - 8.8e-06 25.2 0.0 1.6e-05 24.4 0.0 1.5 1 0 0 1 1 1 1 SH3 domain RsgA_GTPase PF03193.16 RKO83823.1 - 3.8e-05 23.7 0.0 5.9e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 RKO83823.1 - 0.00038 20.5 0.0 0.00065 19.8 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 RKO83823.1 - 0.0033 17.6 0.0 0.0052 17.0 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase AAA_24 PF13479.6 RKO83823.1 - 0.0075 16.0 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain SH3_2 PF07653.17 RKO83823.1 - 0.012 15.3 0.0 0.022 14.4 0.0 1.5 1 0 0 1 1 1 0 Variant SH3 domain AAA_16 PF13191.6 RKO83823.1 - 0.012 16.0 0.0 0.029 14.8 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain Ras PF00071.22 RKO83823.1 - 0.018 14.6 0.0 0.03 13.9 0.0 1.3 1 0 0 1 1 1 0 Ras family IIGP PF05049.13 RKO83823.1 - 0.021 13.9 0.0 0.028 13.5 0.0 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) TniB PF05621.11 RKO83823.1 - 0.093 12.1 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein AAA_22 PF13401.6 RKO83823.1 - 0.11 12.8 0.0 0.2 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain adh_short PF00106.25 RKO83824.1 - 3.5e-15 56.0 0.1 3.9e-15 55.8 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 RKO83824.1 - 9.2e-09 35.5 0.0 1.1e-08 35.2 0.0 1.0 1 0 0 1 1 1 1 KR domain adh_short_C2 PF13561.6 RKO83824.1 - 7.1e-08 32.3 0.1 8e-08 32.1 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Nitro_FeMo-Co PF02579.17 RKO83824.1 - 0.13 12.6 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor Clathrin PF00637.20 RKO83825.1 - 1.3e-105 349.3 15.8 4.5e-34 117.4 0.9 5.0 5 0 0 5 5 5 5 Region in Clathrin and VPS Coatomer_WDAD PF04053.14 RKO83825.1 - 4.3e-11 42.5 0.4 2.9e-05 23.3 0.0 3.1 3 0 0 3 3 3 2 Coatomer WD associated region TPR_7 PF13176.6 RKO83825.1 - 0.00049 19.9 2.2 2.9 8.1 0.0 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 RKO83825.1 - 0.0019 18.8 6.5 1.3 10.0 0.1 5.5 5 1 1 6 6 6 1 Tetratricopeptide repeat TPR_1 PF00515.28 RKO83825.1 - 0.011 15.5 5.6 0.82 9.6 0.2 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF2181 PF10223.9 RKO83825.1 - 0.026 14.0 0.1 0.076 12.5 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2181) TPR_2 PF07719.17 RKO83825.1 - 0.045 13.9 8.4 1.4 9.2 0.2 4.9 4 1 1 5 5 5 0 Tetratricopeptide repeat TPR_8 PF13181.6 RKO83825.1 - 0.68 10.3 0.1 0.68 10.3 0.1 5.1 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_12 PF13424.6 RKO83825.1 - 3.3 8.1 6.1 53 4.2 0.0 4.4 5 1 0 5 5 5 0 Tetratricopeptide repeat Nucleoporin_N PF08801.11 RKO83828.1 - 3.7e-57 194.0 0.1 1.9e-41 142.2 0.1 2.0 2 0 0 2 2 2 2 Nup133 N terminal like ICL PF00463.21 RKO83830.1 - 2.1e-115 386.2 0.0 2.5e-115 386.0 0.0 1.0 1 0 0 1 1 1 1 Isocitrate lyase family HEAT_2 PF13646.6 RKO83830.1 - 0.95 9.9 8.1 3.3 8.2 3.4 2.3 2 0 0 2 2 2 0 HEAT repeats ICL PF00463.21 RKO83831.1 - 4e-25 88.3 0.7 4.3e-25 88.2 0.7 1.0 1 0 0 1 1 1 1 Isocitrate lyase family PB1 PF00564.24 RKO83832.1 - 0.00053 19.9 0.0 0.0011 18.9 0.0 1.5 1 0 0 1 1 1 1 PB1 domain YL1 PF05764.13 RKO83832.1 - 0.17 12.0 3.7 0.22 11.6 3.7 1.3 1 0 0 1 1 1 0 YL1 nuclear protein DNA_pol_phi PF04931.13 RKO83832.1 - 0.23 9.5 12.8 0.33 9.0 12.8 1.1 1 0 0 1 1 1 0 DNA polymerase phi Cwf_Cwc_15 PF04889.12 RKO83832.1 - 0.23 11.2 9.8 0.4 10.4 9.8 1.4 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Nop14 PF04147.12 RKO83832.1 - 0.34 9.1 7.5 0.41 8.8 7.5 1.1 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 RKO83832.1 - 0.56 9.6 7.5 0.7 9.3 7.5 1.1 1 0 0 1 1 1 0 SDA1 BUD22 PF09073.10 RKO83832.1 - 0.99 8.7 7.7 1.3 8.3 7.7 1.1 1 0 0 1 1 1 0 BUD22 CDC45 PF02724.14 RKO83832.1 - 4.5 5.4 4.4 5.6 5.1 4.4 1.1 1 0 0 1 1 1 0 CDC45-like protein RRN3 PF05327.11 RKO83832.1 - 5.8 5.3 6.5 7.5 5.0 6.5 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Methyltransf_25 PF13649.6 RKO83833.1 - 1.2e-15 58.0 0.0 3.3e-15 56.6 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 RKO83833.1 - 2.4e-13 50.7 0.1 9.7e-13 48.7 0.0 1.9 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 RKO83833.1 - 3.7e-12 46.4 0.0 4.9e-12 46.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 RKO83833.1 - 6.6e-12 45.9 0.0 1.2e-11 45.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO83833.1 - 2.5e-09 37.1 0.0 4.5e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CheR PF01739.18 RKO83833.1 - 2.5e-06 27.1 0.0 0.0087 15.6 0.0 2.5 2 1 1 3 3 3 2 CheR methyltransferase, SAM binding domain NNMT_PNMT_TEMT PF01234.17 RKO83833.1 - 5.2e-05 22.6 0.0 0.0035 16.6 0.0 2.3 1 1 1 2 2 2 1 NNMT/PNMT/TEMT family Methyltransf_24 PF13578.6 RKO83833.1 - 0.00065 20.7 0.0 0.0014 19.6 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 RKO83833.1 - 0.0013 18.1 0.0 0.0035 16.7 0.0 1.7 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 RKO83833.1 - 0.0059 16.2 0.0 0.011 15.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_8 PF05148.15 RKO83833.1 - 0.097 12.5 0.0 0.32 10.8 0.0 1.9 1 1 0 1 1 1 0 Hypothetical methyltransferase Rsm22 PF09243.10 RKO83833.1 - 0.13 11.5 0.0 0.23 10.7 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 FmrO PF07091.11 RKO83833.1 - 0.21 11.1 0.0 0.31 10.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) PH PF00169.29 RKO83834.1 - 0.00094 19.7 0.0 0.0015 19.0 0.0 1.3 1 0 0 1 1 1 1 PH domain PH_13 PF16652.5 RKO83834.1 - 0.0094 15.8 0.0 0.17 11.7 0.0 2.1 1 1 0 1 1 1 1 Pleckstrin homology domain IQ_SEC7_PH PF16453.5 RKO83834.1 - 0.022 14.7 0.0 0.037 14.0 0.0 1.2 1 0 0 1 1 1 0 PH domain RNA_lig_T4_1 PF09511.10 RKO83835.1 - 4.9e-15 56.0 0.0 7.4e-15 55.4 0.0 1.2 1 0 0 1 1 1 1 RNA ligase RNA_ligase PF09414.10 RKO83835.1 - 3.3e-05 24.3 0.0 5e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 RNA ligase RBD PF02196.15 RKO83836.1 - 0.012 15.7 0.0 0.022 14.8 0.0 1.4 1 0 0 1 1 1 0 Raf-like Ras-binding domain CutC PF03932.14 RKO83838.1 - 1.7e-32 112.6 0.0 1.9e-32 112.4 0.0 1.0 1 0 0 1 1 1 1 CutC family Glyco_hydro_71 PF03659.14 RKO83838.1 - 0.0044 15.9 0.0 0.0049 15.7 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 71 VHP PF02209.19 RKO83838.1 - 0.15 12.2 0.1 0.31 11.1 0.1 1.5 1 0 0 1 1 1 0 Villin headpiece domain cobW PF02492.19 RKO83840.1 - 3.5e-31 108.2 0.0 4.3e-31 107.9 0.0 1.0 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain Rhodanese PF00581.20 RKO83841.1 - 1.1e-05 25.9 0.1 0.1 13.1 0.1 2.7 3 0 0 3 3 3 2 Rhodanese-like domain Cation_efflux PF01545.21 RKO83843.1 - 7.3e-13 48.7 7.4 1.6e-12 47.6 7.4 1.6 1 1 0 1 1 1 1 Cation efflux family BPD_transp_2 PF02653.16 RKO83843.1 - 0.049 12.8 3.8 0.066 12.4 3.8 1.3 1 0 0 1 1 1 0 Branched-chain amino acid transport system / permease component dCache_2 PF08269.11 RKO83844.1 - 0.26 10.4 1.1 0.37 9.9 1.1 1.3 1 0 0 1 1 1 0 Cache domain DAO PF01266.24 RKO83845.1 - 3.8e-07 30.0 0.0 3.9e-07 30.0 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 RKO83845.1 - 1.4e-05 25.2 0.1 2.5e-05 24.4 0.1 1.6 1 1 0 1 1 1 1 NAD(P)-binding Rossmann-like domain ApbA PF02558.16 RKO83845.1 - 0.00013 21.6 0.1 0.00017 21.2 0.1 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Pyr_redox_2 PF07992.14 RKO83845.1 - 0.01 15.1 0.0 0.012 14.8 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 RKO83845.1 - 0.012 15.5 0.0 0.012 15.5 0.0 1.1 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IlvN PF07991.12 RKO83845.1 - 0.016 14.8 0.0 0.019 14.5 0.0 1.1 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_Gly3P_dh_N PF01210.23 RKO83845.1 - 0.018 15.0 0.1 0.023 14.7 0.1 1.2 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FAD_binding_3 PF01494.19 RKO83845.1 - 0.018 14.3 0.0 0.023 14.0 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain Pyr_redox PF00070.27 RKO83845.1 - 0.025 15.1 0.0 0.037 14.6 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 RKO83845.1 - 0.043 13.1 0.0 0.043 13.1 0.0 1.2 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain NmrA PF05368.13 RKO83845.1 - 0.056 13.0 0.0 0.07 12.7 0.0 1.1 1 0 0 1 1 1 0 NmrA-like family FAD_binding_2 PF00890.24 RKO83845.1 - 0.068 12.2 0.0 0.076 12.1 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain Glu_dehyd_C PF16912.5 RKO83845.1 - 0.1 12.0 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus Hint PF01079.20 RKO83845.1 - 0.12 11.9 0.1 0.15 11.5 0.1 1.1 1 0 0 1 1 1 0 Hint module 2-Hacid_dh_C PF02826.19 RKO83845.1 - 0.15 11.4 0.0 0.2 11.0 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 RKO83845.1 - 0.18 11.9 0.0 0.25 11.4 0.0 1.2 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Thi4 PF01946.17 RKO83845.1 - 0.21 10.8 0.0 0.31 10.2 0.0 1.2 1 0 0 1 1 1 0 Thi4 family WD40 PF00400.32 RKO83847.1 - 1.9e-14 53.8 11.8 0.0021 18.9 0.8 7.1 6 2 0 6 6 6 3 WD domain, G-beta repeat PD40 PF07676.12 RKO83847.1 - 1.6e-06 27.9 0.5 0.16 12.0 0.0 4.7 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat ANAPC4_WD40 PF12894.7 RKO83847.1 - 1.5e-05 25.2 0.0 1.1 9.7 0.0 4.4 3 2 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 RKO83847.1 - 0.0004 20.3 0.0 0.026 14.4 0.0 3.0 3 0 0 3 3 3 1 Eukaryotic translation initiation factor eIF2A IKI3 PF04762.12 RKO83847.1 - 0.00085 17.5 0.1 0.0012 16.9 0.1 1.2 1 0 0 1 1 1 1 IKI3 family DUF2793 PF10983.8 RKO83847.1 - 0.059 13.2 0.0 0.17 11.8 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2793) DNA_pol_alpha_N PF12254.8 RKO83847.1 - 0.21 11.7 4.8 0.46 10.6 4.8 1.6 1 0 0 1 1 1 0 DNA polymerase alpha subunit p180 N terminal DUF612 PF04747.12 RKO83848.1 - 6.1 5.8 7.2 9.4 5.2 7.2 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF612 Cwf_Cwc_15 PF04889.12 RKO83849.1 - 2.9 7.6 7.5 0.23 11.2 2.2 1.9 2 0 0 2 2 2 0 Cwf15/Cwc15 cell cycle control protein Pkinase PF00069.25 RKO83851.1 - 3.6e-33 115.0 0.0 3.9e-33 114.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO83851.1 - 1.1e-19 70.7 0.0 1.2e-19 70.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO83851.1 - 2.5e-06 27.0 0.0 4.6e-06 26.1 0.0 1.4 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 RKO83851.1 - 2.4e-05 23.3 0.0 2.7e-05 23.1 0.0 1.0 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 RKO83851.1 - 0.036 13.4 0.0 0.047 13.1 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 RKO83851.1 - 0.046 13.6 0.0 0.06 13.3 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF2946 PF11162.8 RKO83852.1 - 0.058 14.0 1.6 0.093 13.4 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2946) MINDY_DUB PF04424.13 RKO83854.1 - 6.8e-08 32.6 0.0 1.1e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 MINDY deubiquitinase Sugar_tr PF00083.24 RKO83855.1 - 1.7e-15 56.9 2.6 1.8e-15 56.8 2.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 RKO83855.1 - 1.4e-05 24.2 6.6 1.5e-05 24.1 6.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily PAS_3 PF08447.12 RKO83858.1 - 0.012 15.9 0.0 5.1 7.4 0.0 2.5 2 0 0 2 2 2 0 PAS fold DUF1796 PF08795.10 RKO83858.1 - 0.1 12.5 0.0 0.18 11.7 0.0 1.3 1 0 0 1 1 1 0 Putative papain-like cysteine peptidase (DUF1796) NARP1 PF12569.8 RKO83860.1 - 0.63 8.9 4.4 0.74 8.7 4.4 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Ndc1_Nup PF09531.10 RKO83860.1 - 3.3 6.3 4.7 4.3 5.9 4.7 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup peroxidase PF00141.23 RKO83861.1 - 5.1e-25 88.5 0.0 7e-25 88.1 0.0 1.1 1 0 0 1 1 1 1 Peroxidase VASt PF16016.5 RKO83862.1 - 1.6e-06 28.6 0.0 2.7e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 VAD1 Analog of StAR-related lipid transfer domain Bud13 PF09736.9 RKO83863.1 - 7.2e-46 156.2 3.6 8.6e-46 155.9 3.6 1.1 1 0 0 1 1 1 1 Pre-mRNA-splicing factor of RES complex AAA_assoc_2 PF16193.5 RKO83864.1 - 0.02 15.3 0.0 0.037 14.4 0.0 1.4 1 0 0 1 1 1 0 AAA C-terminal domain RCC1 PF00415.18 RKO83866.1 - 4.6e-31 107.2 0.1 5.4e-12 46.2 0.0 3.5 3 0 0 3 3 3 3 Regulator of chromosome condensation (RCC1) repeat Ank_4 PF13637.6 RKO83866.1 - 2e-13 50.6 0.3 6.2e-06 26.7 0.1 3.4 1 1 2 3 3 3 3 Ankyrin repeats (many copies) RCC1_2 PF13540.6 RKO83866.1 - 6.6e-13 48.1 16.7 4.2e-09 36.0 0.4 4.3 4 0 0 4 4 4 3 Regulator of chromosome condensation (RCC1) repeat Ank_5 PF13857.6 RKO83866.1 - 9.5e-11 41.7 0.2 1.3e-09 38.1 0.1 2.5 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO83866.1 - 4.4e-10 40.0 0.1 5.6e-08 33.3 0.1 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 RKO83866.1 - 4.7e-06 26.8 1.4 0.46 11.0 0.0 4.3 4 0 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 RKO83866.1 - 4.9e-05 23.4 0.3 0.07 13.7 0.1 4.0 4 0 0 4 4 4 1 Ankyrin repeat DUF1459 PF07312.11 RKO83866.1 - 0.068 13.4 0.2 12 6.2 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1459) DUF2457 PF10446.9 RKO83866.1 - 0.22 10.6 14.0 0.35 10.0 14.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Sigma70_ner PF04546.13 RKO83866.1 - 0.25 11.2 8.5 0.42 10.5 8.5 1.3 1 0 0 1 1 1 0 Sigma-70, non-essential region FAM176 PF14851.6 RKO83866.1 - 0.33 10.6 4.3 0.63 9.7 4.3 1.4 1 0 0 1 1 1 0 FAM176 family Nop14 PF04147.12 RKO83866.1 - 1 7.5 9.3 1.2 7.3 6.7 1.9 2 0 0 2 2 2 0 Nop14-like family CDC45 PF02724.14 RKO83866.1 - 3.8 5.7 6.6 5.1 5.3 6.6 1.1 1 0 0 1 1 1 0 CDC45-like protein PBP1_TM PF14812.6 RKO83866.1 - 3.9 7.9 14.4 3 8.3 11.0 2.1 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal NOA36 PF06524.12 RKO83866.1 - 4.2 6.6 11.7 6.7 5.9 11.7 1.2 1 0 0 1 1 1 0 NOA36 protein RXT2_N PF08595.11 RKO83866.1 - 8.1 6.5 7.8 16 5.5 7.8 1.4 1 0 0 1 1 1 0 RXT2-like, N-terminal DNA_pol_phi PF04931.13 RKO83866.1 - 9.3 4.2 14.5 13 3.7 14.5 1.1 1 0 0 1 1 1 0 DNA polymerase phi Sec62 PF03839.16 RKO83867.1 - 4.7 6.7 9.0 5.9 6.3 9.0 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 Presenilin PF01080.17 RKO83867.1 - 5.4 5.7 5.4 5.9 5.5 5.4 1.0 1 0 0 1 1 1 0 Presenilin Methyltransf_16 PF10294.9 RKO83868.1 - 1.3e-20 73.8 0.0 1.8e-20 73.4 0.0 1.2 1 0 0 1 1 1 1 Lysine methyltransferase PrmA PF06325.13 RKO83868.1 - 2.6e-07 30.3 0.0 3.6e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 RKO83868.1 - 7.4e-05 22.4 0.0 0.00011 21.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 RKO83868.1 - 0.0044 17.7 0.0 0.014 16.0 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain FAM86 PF14904.6 RKO83868.1 - 0.023 14.8 0.0 0.052 13.6 0.0 1.5 1 1 0 1 1 1 0 Family of unknown function Cons_hypoth95 PF03602.15 RKO83868.1 - 0.031 13.9 0.0 0.049 13.3 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Sec62 PF03839.16 RKO83869.1 - 4.7 6.7 9.0 5.9 6.3 9.0 1.0 1 0 0 1 1 1 0 Translocation protein Sec62 Presenilin PF01080.17 RKO83869.1 - 5.4 5.7 5.4 5.9 5.5 5.4 1.0 1 0 0 1 1 1 0 Presenilin CCDC154 PF15450.6 RKO83870.1 - 0.027 13.0 3.2 0.034 12.7 3.2 1.0 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 154 Sin3a_C PF16879.5 RKO83870.1 - 0.058 13.1 1.1 0.065 12.9 1.1 1.0 1 0 0 1 1 1 0 C-terminal domain of Sin3a protein Prenyltransf PF01255.19 RKO83871.1 - 1.2e-13 51.2 0.0 1.2e-13 51.1 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Prenyltransf PF01255.19 RKO83872.1 - 9.2e-29 100.6 0.0 1.1e-28 100.3 0.0 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Fz PF01392.22 RKO83873.1 - 1.2e-07 32.3 5.5 1.7e-07 31.9 5.5 1.3 1 0 0 1 1 1 1 Fz domain PAS_9 PF13426.7 RKO83874.1 - 0.016 15.5 0.4 6.7 7.0 0.1 2.7 2 1 0 2 2 2 0 PAS domain DUF3869 PF12985.7 RKO83874.1 - 0.063 13.7 0.2 0.14 12.6 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3869) ArgoN PF16486.5 RKO83875.1 - 6.3e-11 43.0 0.0 1.9e-10 41.5 0.0 1.7 1 1 0 1 1 1 1 N-terminal domain of argonaute ArgoL1 PF08699.10 RKO83875.1 - 1.4e-06 27.8 0.0 1.5e-05 24.6 0.1 2.5 2 0 0 2 2 2 1 Argonaute linker 1 domain Aminotran_5 PF00266.19 RKO83880.1 - 0.0011 18.0 0.0 0.5 9.3 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V Pyridoxal_deC PF00282.19 RKO83880.1 - 0.012 14.3 0.0 0.022 13.5 0.0 1.5 1 1 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain MCCD1 PF15707.5 RKO83880.1 - 0.17 12.3 0.0 0.32 11.5 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial coiled-coil domain protein 1 Helicase_C PF00271.31 RKO83882.1 - 2.2e-16 60.2 0.0 5.1e-16 59.0 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain RecQ_Zn_bind PF16124.5 RKO83882.1 - 1.2e-05 26.0 0.0 2.9e-05 24.7 0.0 1.7 1 0 0 1 1 1 1 RecQ zinc-binding DOMON PF03351.17 RKO83883.1 - 9.5e-11 42.0 0.1 1.5e-10 41.3 0.1 1.2 1 0 0 1 1 1 1 DOMON domain CDH-cyt PF16010.5 RKO83883.1 - 5.9e-07 29.3 1.2 8.6e-07 28.8 1.2 1.2 1 0 0 1 1 1 1 Cytochrome domain of cellobiose dehydrogenase Bac_rhodopsin PF01036.18 RKO83883.1 - 0.0015 18.1 6.7 0.0026 17.3 6.7 1.4 1 0 0 1 1 1 1 Bacteriorhodopsin-like protein peroxidase PF00141.23 RKO83884.1 - 3.7e-26 92.2 0.1 5.1e-26 91.8 0.1 1.1 1 0 0 1 1 1 1 Peroxidase CCDC24 PF15669.5 RKO83885.1 - 0.46 10.3 3.9 1.2 8.9 3.9 1.7 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 24 family Ribosomal_60s PF00428.19 RKO83887.1 - 3.9 8.1 10.1 7.7 7.2 1.5 2.7 2 0 0 2 2 2 0 60s Acidic ribosomal protein Metallopep PF12044.8 RKO83889.1 - 0.00049 18.8 0.0 0.00054 18.7 0.0 1.0 1 0 0 1 1 1 1 Putative peptidase family Rap_GAP PF02145.15 RKO83890.1 - 1.6e-19 70.2 0.0 2.6e-19 69.5 0.0 1.3 1 0 0 1 1 1 1 Rap/ran-GAP HSP20 PF00011.21 RKO83891.1 - 4.2e-21 75.0 1.2 5.3e-21 74.7 1.2 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 RKO83891.1 - 3.2e-10 39.4 0.1 5.7e-10 38.6 0.1 1.4 1 1 0 1 1 1 1 HSP20-like domain found in ArsA FKBP26_C PF18046.1 RKO83891.1 - 0.0011 19.0 1.1 0.14 12.3 0.0 2.6 2 1 0 2 2 2 2 FKBP26_C-terminal DUF572 PF04502.13 RKO83894.1 - 0.17 11.4 7.0 0.23 11.1 7.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF572) zf-CCHC_3 PF13917.6 RKO83896.1 - 0.29 11.1 4.1 2.7 8.1 2.4 2.3 2 0 0 2 2 2 0 Zinc knuckle CBM_1 PF00734.18 RKO83896.1 - 4.3 7.4 9.8 1.6 8.8 1.4 2.6 2 1 0 2 2 2 0 Fungal cellulose binding domain GLE1 PF07817.13 RKO83898.1 - 0.21 10.8 0.0 0.36 10.0 0.0 1.3 1 0 0 1 1 1 0 GLE1-like protein LRR_4 PF12799.7 RKO83898.1 - 1.5 9.3 3.9 4.4 7.9 1.0 3.1 3 1 1 4 4 4 0 Leucine Rich repeats (2 copies) Crust_neuro_H PF03858.13 RKO83900.1 - 0.029 15.2 0.9 0.066 14.0 0.9 1.6 1 0 0 1 1 1 0 Crustacean neurohormone H Methyltransf_16 PF10294.9 RKO83901.1 - 2.8e-27 95.5 0.0 4.1e-27 95.0 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase Asp PF00026.23 RKO83904.1 - 0.005 16.3 4.9 0.22 10.9 3.8 2.7 1 1 1 2 2 2 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO83904.1 - 0.028 14.6 0.4 0.089 13.0 0.1 1.8 1 1 1 2 2 2 0 Xylanase inhibitor N-terminal TAXi_N PF14543.6 RKO83905.1 - 0.00073 19.8 0.1 0.0012 19.1 0.1 1.4 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal Asp PF00026.23 RKO83905.1 - 0.0035 16.8 1.0 0.011 15.2 1.0 1.7 1 1 0 1 1 1 1 Eukaryotic aspartyl protease Asp_protease_2 PF13650.6 RKO83905.1 - 0.016 15.9 0.0 0.024 15.3 0.0 1.4 1 0 0 1 1 1 0 Aspartyl protease IPU_b_solenoid PF18783.1 RKO83905.1 - 0.044 13.8 0.1 0.12 12.5 0.1 1.7 1 0 0 1 1 1 0 Isopullulanase beta-solenoid repeat zf-GRF PF06839.12 RKO83906.1 - 9.3e-05 22.4 8.0 0.0018 18.3 3.2 2.4 2 0 0 2 2 2 2 GRF zinc finger DUF641 PF04859.12 RKO83906.1 - 0.017 15.5 0.0 2.5 8.5 0.0 2.3 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) Cortex-I_coil PF09304.10 RKO83906.1 - 0.023 14.9 0.4 4.8 7.4 0.1 2.3 2 0 0 2 2 2 0 Cortexillin I, coiled coil MPS2 PF17060.5 RKO83906.1 - 0.17 11.1 0.0 1.9 7.6 0.0 2.0 2 0 0 2 2 2 0 Monopolar spindle protein 2 KH_1 PF00013.29 RKO83907.1 - 8.8e-06 25.5 0.1 0.00019 21.2 0.1 2.6 2 1 1 3 3 3 1 KH domain CBS PF00571.28 RKO83908.1 - 9.8e-25 86.8 1.0 5.3e-07 30.0 0.1 4.4 4 0 0 4 4 4 4 CBS domain DUF3525 PF12039.8 RKO83908.1 - 0.02 13.6 0.1 0.039 12.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3525) SAP30_Sin3_bdg PF13867.6 RKO83908.1 - 0.066 13.6 0.0 0.15 12.5 0.0 1.5 1 0 0 1 1 1 0 Sin3 binding region of histone deacetylase complex subunit SAP30 ABC_tran PF00005.27 RKO83909.1 - 1e-15 58.5 0.0 1.9e-15 57.6 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 RKO83909.1 - 2.1e-05 24.5 0.0 3.5e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 RKO83909.1 - 0.0008 20.0 0.1 0.0041 17.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 RKO83909.1 - 0.0024 17.6 0.0 0.0052 16.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 RKO83909.1 - 0.0065 15.9 0.0 0.018 14.5 0.0 1.7 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_27 PF13514.6 RKO83909.1 - 0.049 13.2 0.0 0.084 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 RKO83909.1 - 0.05 13.0 0.0 0.078 12.3 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_16 PF13191.6 RKO83909.1 - 0.11 12.9 0.2 0.26 11.7 0.1 1.7 2 0 0 2 2 2 0 AAA ATPase domain Mg_chelatase PF01078.21 RKO83909.1 - 0.16 11.4 0.1 0.27 10.6 0.1 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_15 PF13175.6 RKO83909.1 - 0.18 11.5 0.0 0.3 10.7 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain Hexapep PF00132.24 RKO83910.1 - 0.00074 19.2 4.2 0.0016 18.1 4.2 1.6 1 0 0 1 1 1 1 Bacterial transferase hexapeptide (six repeats) CDT1 PF08839.11 RKO83914.1 - 2e-18 67.3 0.0 8.7e-07 29.4 0.0 3.6 3 0 0 3 3 3 3 DNA replication factor CDT1 like AraC_N PF06719.13 RKO83916.1 - 1.9e-07 30.8 0.0 1.6 8.4 0.0 5.9 1 1 3 5 5 5 2 AraC-type transcriptional regulator N-terminus FLYWCH_N PF15423.6 RKO83916.1 - 9.4e-05 22.5 3.4 38 4.5 0.0 6.9 3 2 4 8 8 8 0 FLYWCH-type zinc finger-containing protein AraC_binding PF02311.19 RKO83916.1 - 0.00014 21.8 2.5 0.39 10.6 0.1 4.9 4 1 1 5 5 5 1 AraC-like ligand binding domain DUF3447 PF11929.8 RKO83916.1 - 0.00018 21.4 2.2 4.5 7.3 0.1 5.0 3 3 2 5 5 5 2 Domain of unknown function (DUF3447) DUF1102 PF06510.11 RKO83916.1 - 0.015 15.5 11.3 2.3 8.4 1.5 4.9 1 1 2 5 5 5 0 Protein of unknown function (DUF1102) RDM PF11002.8 RKO83916.1 - 0.12 12.4 0.8 88 3.2 0.0 4.1 4 0 0 4 4 4 0 RFPL defining motif (RDM) FlaE PF07559.14 RKO83916.1 - 0.27 11.8 4.2 15 6.2 0.2 3.8 2 2 0 2 2 2 0 Flagellar basal body protein FlaE DUF4116 PF13475.6 RKO83916.1 - 0.29 10.9 1.9 4.9 7.0 0.0 3.9 4 0 0 4 4 4 0 Domain of unknown function (DUF4116) Ribosomal_L37ae PF01780.19 RKO83918.1 - 1.7e-39 133.8 8.1 1.9e-39 133.6 8.1 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family zf-BED PF02892.15 RKO83918.1 - 0.026 14.6 4.1 1.7 8.7 0.2 2.2 1 1 1 2 2 2 0 BED zinc finger Zn_Tnp_IS1595 PF12760.7 RKO83918.1 - 0.037 14.0 1.9 0.061 13.3 1.9 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-RING_13 PF17977.1 RKO83918.1 - 0.045 13.9 1.7 0.062 13.4 1.7 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain DUF1451 PF07295.11 RKO83918.1 - 0.062 13.3 0.7 0.088 12.8 0.7 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain A2L_zn_ribbon PF08792.10 RKO83918.1 - 0.076 12.7 3.0 5.3 6.9 0.1 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain Zn_ribbon_SprT PF17283.2 RKO83918.1 - 1.6 8.7 8.3 0.25 11.3 2.7 2.4 3 1 0 3 3 3 0 SprT-like zinc ribbon domain zf-H2C2_2 PF13465.6 RKO83918.1 - 2.3 8.8 6.0 3 8.4 1.2 2.2 1 1 1 2 2 2 0 Zinc-finger double domain Pkinase PF00069.25 RKO83919.1 - 8.3e-27 94.2 0.0 1e-26 93.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO83919.1 - 2.4e-16 59.8 0.0 2.9e-16 59.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO83919.1 - 3.1e-10 39.4 0.0 4.2e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 RKO83919.1 - 0.0021 18.0 0.0 0.0074 16.2 0.0 1.9 3 0 0 3 3 3 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 RKO83919.1 - 0.024 13.6 0.0 0.035 13.1 0.0 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Kdo PF06293.14 RKO83919.1 - 0.049 13.0 0.4 0.1 12.0 0.0 1.7 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Helicase_C_3 PF13625.6 RKO83920.1 - 1.9e-33 115.3 0.0 2.9e-33 114.7 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO83920.1 - 6e-06 26.4 0.0 1e-05 25.6 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 RKO83920.1 - 0.073 12.8 0.0 0.18 11.6 0.0 1.6 1 0 0 1 1 1 0 DEAD/DEAH box helicase PNP_UDP_1 PF01048.20 RKO83922.1 - 2.6e-45 154.5 2.0 5.4e-45 153.5 2.0 1.5 1 1 0 1 1 1 1 Phosphorylase superfamily DIM1 PF02966.16 RKO83923.1 - 8.1e-34 116.3 0.0 9.5e-34 116.0 0.0 1.0 1 0 0 1 1 1 1 Mitosis protein DIM1 Cation_ATPase_N PF00690.26 RKO83926.1 - 2.2e-14 52.9 0.0 4e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus DUF3336 PF11815.8 RKO83927.1 - 0.025 14.3 0.0 3 7.6 0.0 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF3336) DIT1_PvcA PF05141.12 RKO83929.1 - 2.3e-83 279.9 0.0 3e-83 279.5 0.0 1.1 1 0 0 1 1 1 1 Pyoverdine/dityrosine biosynthesis protein CC2D2AN-C2 PF15625.6 RKO83931.1 - 3.5e-21 75.7 0.0 1.5e-10 41.1 0.0 2.4 2 0 0 2 2 2 2 CC2D2A N-terminal C2 domain Ank_4 PF13637.6 RKO83932.1 - 0.00057 20.4 0.4 0.18 12.4 0.0 3.7 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO83932.1 - 0.004 17.7 0.4 0.3 11.7 0.0 2.7 1 1 2 3 3 3 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO83932.1 - 0.093 13.3 0.7 19 6.2 0.1 4.2 4 1 1 5 5 5 0 Ankyrin repeat SPX PF03105.19 RKO83933.1 - 4.8e-07 30.0 1.7 0.00061 19.8 0.0 3.1 2 1 1 3 3 3 2 SPX domain HAD PF12710.7 RKO83933.1 - 1.8e-06 28.5 0.1 5e-06 27.0 0.1 1.8 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 RKO83933.1 - 2.1e-06 28.2 0.1 4.4e-06 27.1 0.1 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase ACT_6 PF13740.6 RKO83933.1 - 5e-06 26.4 0.0 1.1e-05 25.3 0.0 1.6 1 0 0 1 1 1 1 ACT domain Put_Phosphatase PF06888.12 RKO83933.1 - 0.065 12.6 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Putative Phosphatase DUF705 PF05152.12 RKO83933.1 - 0.094 12.2 0.1 0.16 11.4 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF705) Ribosomal_S30 PF04758.14 RKO83934.1 - 3.1e-27 94.5 9.6 3.6e-27 94.3 9.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S30 Mcl1_mid PF12341.8 RKO83935.1 - 3.4e-74 249.9 0.0 1.7e-70 237.7 0.0 2.6 2 1 0 2 2 2 2 Minichromosome loss protein, Mcl1, middle region HlyIII PF03006.20 RKO83938.1 - 5.3e-59 199.6 18.9 7.4e-59 199.2 18.9 1.1 1 0 0 1 1 1 1 Haemolysin-III related Pam17 PF08566.10 RKO83938.1 - 7.5 6.4 4.9 2 8.2 0.5 2.1 2 1 1 3 3 3 0 Mitochondrial import protein Pam17 Vps51 PF08700.11 RKO83939.1 - 6.8e-08 32.5 0.0 1.8e-07 31.1 0.0 1.7 1 0 0 1 1 1 1 Vps51/Vps67 Sec10 PF07393.11 RKO83940.1 - 3.3e-39 134.9 0.0 4.5e-39 134.5 0.0 1.0 1 0 0 1 1 1 1 Exocyst complex component Sec10 F-box PF00646.33 RKO83940.1 - 3.8e-07 29.8 0.2 8.7e-07 28.7 0.2 1.7 1 0 0 1 1 1 1 F-box domain F-box-like PF12937.7 RKO83940.1 - 1.4e-05 24.9 0.8 5.7e-05 22.9 0.1 2.2 2 0 0 2 2 2 1 F-box-like SpoIIAA-like PF11964.8 RKO83940.1 - 0.13 13.4 0.2 0.33 12.0 0.1 1.7 2 0 0 2 2 2 0 SpoIIAA-like Hpt PF01627.23 RKO83940.1 - 0.13 12.5 0.1 0.84 9.9 0.0 2.3 2 0 0 2 2 2 0 Hpt domain HYR PF02494.16 RKO83941.1 - 0.063 13.6 0.0 0.085 13.2 0.0 1.3 1 0 0 1 1 1 0 HYR domain Pectinesterase PF01095.19 RKO83943.1 - 7e-15 54.5 0.0 7.1e-08 31.5 0.0 2.1 2 0 0 2 2 2 2 Pectinesterase Clat_adaptor_s PF01217.20 RKO83945.1 - 2.3e-25 89.2 1.3 2.4e-25 89.1 1.3 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain HSF_DNA-bind PF00447.17 RKO83946.1 - 2e-31 108.5 0.9 2.3e-31 108.3 0.9 1.0 1 0 0 1 1 1 1 HSF-type DNA-binding Ets PF00178.22 RKO83946.1 - 0.011 16.2 0.0 0.017 15.6 0.0 1.3 1 1 0 1 1 1 0 Ets-domain Cdc6_C PF09079.11 RKO83946.1 - 0.047 13.7 0.0 0.062 13.3 0.0 1.2 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain ubiquitin PF00240.23 RKO83947.1 - 2.8e-121 395.4 18.2 7.2e-34 115.4 0.5 5.0 4 1 1 5 5 5 5 Ubiquitin family Rad60-SLD PF11976.8 RKO83947.1 - 1.2e-54 182.0 12.8 1.6e-15 56.7 0.6 4.8 5 0 0 5 5 5 4 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 RKO83947.1 - 7.1e-20 71.3 7.1 0.00024 21.5 0.1 5.5 4 3 0 4 4 4 4 Ubiquitin-like domain TBK1_ULD PF18396.1 RKO83947.1 - 1.2e-14 54.0 1.5 0.032 14.2 0.0 4.2 4 0 0 4 4 4 4 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 RKO83947.1 - 2.3e-13 50.2 1.2 0.1 12.7 0.0 4.8 4 3 0 4 4 4 4 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 RKO83947.1 - 4e-13 49.8 1.0 0.03 14.9 0.0 4.2 1 1 3 4 4 4 4 DUF2407 ubiquitin-like domain Ubiquitin_5 PF18037.1 RKO83947.1 - 6.1e-12 45.7 7.2 0.023 15.1 0.2 4.1 4 0 0 4 4 4 4 Ubiquitin-like domain Sde2_N_Ubi PF13019.6 RKO83947.1 - 1.2e-07 31.7 1.1 0.53 10.1 0.0 3.9 1 1 3 4 4 4 3 Silencing defective 2 N-terminal ubiquitin domain Methyltrans_RNA PF04452.14 RKO83947.1 - 2.7e-07 30.1 1.0 0.69 9.2 0.0 3.2 3 0 0 3 3 3 3 RNA methyltransferase Ubiquitin_4 PF18036.1 RKO83947.1 - 2.1e-06 27.7 15.1 8.5 6.5 0.1 6.3 6 0 0 6 6 6 0 Ubiquitin-like domain DUF3861 PF12977.7 RKO83947.1 - 3.7e-05 23.8 0.6 7.7 6.8 0.0 3.5 3 0 0 3 3 3 0 Domain of Unknown Function with PDB structure (DUF3861) DUF2870 PF11069.8 RKO83947.1 - 6.1e-05 23.3 0.0 29 5.1 0.0 4.7 4 1 0 4 4 4 0 Protein of unknown function (DUF2870) UDP-g_GGTase PF06427.11 RKO83947.1 - 0.00026 21.1 1.8 3.6 7.7 0.1 3.4 3 0 0 3 3 3 2 UDP-glucose:Glycoprotein Glucosyltransferase ACT_5 PF13710.6 RKO83947.1 - 0.00059 19.6 1.4 14 5.6 0.0 3.4 3 0 0 3 3 3 0 ACT domain Big_7 PF17957.1 RKO83947.1 - 0.0022 18.7 0.0 45 4.9 0.0 3.2 3 0 0 3 3 3 0 Bacterial Ig domain ACT_4 PF13291.6 RKO83947.1 - 0.0055 17.3 0.3 55 4.5 0.0 3.4 3 0 0 3 3 3 0 ACT domain DUF969 PF06149.12 RKO83947.1 - 0.016 14.6 0.0 18 4.6 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF969) ORF11CD3 PF10549.9 RKO83947.1 - 0.14 12.3 0.0 88 3.3 0.0 3.7 3 0 0 3 3 3 0 ORF11CD3 domain PilN_bio_d PF18222.1 RKO83947.1 - 0.19 12.1 0.2 37 4.8 0.0 3.4 4 0 0 4 4 4 0 PilN biogenesis protein dimerization domain Phage_sheath_1N PF17481.2 RKO83947.1 - 0.26 11.8 2.9 39 4.8 0.6 3.1 1 1 1 2 2 2 0 Phage tail sheath protein beta-sandwich domain Plexin_cytopl PF08337.12 RKO83947.1 - 0.3 9.7 7.8 16 4.0 0.3 3.8 3 1 0 4 4 4 0 Plexin cytoplasmic RasGAP domain Tash_PEST PF07708.11 RKO83947.1 - 0.32 11.2 18.4 6 7.2 1.4 3.4 3 0 0 3 3 3 0 Tash protein PEST motif YcgR_2 PF12945.7 RKO83947.1 - 0.37 11.0 2.0 1.2e+02 2.9 0.1 3.2 3 0 0 3 3 3 0 Flagellar protein YcgR DMA PF03474.14 RKO83947.1 - 0.4 10.3 4.3 1.5e+02 2.1 0.0 4.1 4 0 0 4 4 4 0 DMRTA motif ProRS-C_2 PF09181.10 RKO83947.1 - 0.72 10.0 7.4 52 4.1 0.1 3.7 4 0 0 4 4 4 0 Prolyl-tRNA synthetase, C-terminal FlgD_ig PF13860.6 RKO83947.1 - 0.88 9.5 4.6 94 3.0 0.1 3.4 3 0 0 3 3 3 0 FlgD Ig-like domain PI3K_p85B PF02192.16 RKO83947.1 - 1.7 8.5 5.3 80 3.1 0.1 3.3 3 0 0 3 3 3 0 PI3-kinase family, p85-binding domain ubiquitin PF00240.23 RKO83948.1 - 6.1e-10 38.7 0.0 8.7e-10 38.2 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 RKO83948.1 - 0.0026 18.2 0.0 0.0032 17.9 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD PF11976.8 RKO83948.1 - 0.15 11.9 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like WD40 PF00400.32 RKO83950.1 - 4.9e-39 131.6 16.8 9.9e-07 29.4 0.1 7.1 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO83950.1 - 7.7e-17 61.4 0.0 0.0016 18.7 0.1 5.1 1 1 4 5 5 5 5 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 RKO83950.1 - 5.4e-05 23.2 0.0 0.15 11.9 0.0 2.7 1 1 2 3 3 3 2 Eukaryotic translation initiation factor eIF2A WD40_like PF17005.5 RKO83950.1 - 9.1e-05 21.9 0.0 0.0012 18.2 0.0 2.6 2 1 1 3 3 3 1 WD40-like domain Nup160 PF11715.8 RKO83950.1 - 0.029 13.0 0.7 2 6.9 0.0 2.2 1 1 0 2 2 2 0 Nucleoporin Nup120/160 Cytochrom_D1 PF02239.16 RKO83950.1 - 0.14 10.7 0.0 0.29 9.6 0.0 1.5 1 0 0 1 1 1 0 Cytochrome D1 heme domain TIM PF00121.18 RKO83951.1 - 4.5e-86 288.2 0.0 5.1e-86 288.0 0.0 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase CoA_binding PF02629.19 RKO83951.1 - 0.016 15.9 0.4 0.07 13.8 0.0 2.1 3 0 0 3 3 3 0 CoA binding domain DeoRC PF00455.22 RKO83951.1 - 0.068 13.1 0.1 0.18 11.7 0.1 1.8 2 0 0 2 2 2 0 DeoR C terminal sensor domain Abhydrolase_4 PF08386.10 RKO83952.1 - 5.3e-16 58.6 0.0 5.8e-16 58.5 0.0 1.0 1 0 0 1 1 1 1 TAP-like protein IIGP PF05049.13 RKO83954.1 - 0.081 12.0 0.0 0.098 11.7 0.0 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) YEATS PF03366.16 RKO83955.1 - 2.6e-12 46.5 0.2 6.1e-12 45.4 0.0 1.8 2 1 0 2 2 2 1 YEATS family AAA_22 PF13401.6 RKO83956.1 - 0.0014 18.9 0.0 0.004 17.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 RKO83956.1 - 0.074 12.6 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_25 PF13481.6 RKO83956.1 - 0.12 12.0 0.1 0.28 10.7 0.1 1.6 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 RKO83956.1 - 0.17 10.9 0.0 0.49 9.4 0.0 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein SANT_DAMP1_like PF16282.5 RKO83957.1 - 1e-21 76.9 1.7 2.1e-21 75.9 0.1 2.2 2 0 0 2 2 2 1 SANT/Myb-like domain of DAMP1 DMAP1 PF05499.12 RKO83957.1 - 5.3e-07 29.7 6.4 1.8e-05 24.7 6.4 2.3 1 1 0 1 1 1 1 DNA methyltransferase 1-associated protein 1 (DMAP1) Myb_DNA-bind_6 PF13921.6 RKO83957.1 - 0.00078 19.6 0.8 0.018 15.3 0.0 2.6 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 RKO83957.1 - 0.059 13.6 0.0 0.3 11.3 0.0 2.1 2 0 0 2 2 2 0 Myb-like DNA-binding domain DMAP1_like PF17024.5 RKO83957.1 - 0.078 13.1 0.0 0.15 12.2 0.0 1.5 1 0 0 1 1 1 0 Putative DMAP1-like DUF4119 PF13494.6 RKO83957.1 - 9.6 6.4 6.7 22 5.2 2.0 2.8 3 0 0 3 3 3 0 Domain of unknown function, B. Theta Gene description (DUF4119) DUF4668 PF15701.5 RKO83958.1 - 6.6 6.5 8.2 7.8 6.3 0.9 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4668) START PF01852.19 RKO83960.1 - 1.3e-20 73.7 0.0 3e-20 72.5 0.0 1.5 2 0 0 2 2 2 1 START domain FTR1 PF03239.14 RKO83962.1 - 1.7e-38 132.6 3.5 1.9e-38 132.4 3.5 1.0 1 0 0 1 1 1 1 Iron permease FTR1 family DUF1772 PF08592.11 RKO83962.1 - 0.016 15.5 1.5 0.016 15.5 1.5 1.6 2 1 0 2 2 2 0 Domain of unknown function (DUF1772) Anoctamin PF04547.12 RKO83962.1 - 0.023 13.6 0.3 0.024 13.5 0.3 1.1 1 0 0 1 1 1 0 Calcium-activated chloride channel DUF1440 PF07274.12 RKO83962.1 - 0.055 13.8 0.5 0.095 13.0 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1440) RseC_MucC PF04246.12 RKO83962.1 - 0.082 12.9 2.7 0.56 10.2 0.5 2.5 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC PsbX PF06596.11 RKO83962.1 - 0.21 11.6 3.0 0.79 9.8 3.0 2.0 1 0 0 1 1 1 0 Photosystem II reaction centre X protein (PsbX) ABC2_membrane_5 PF13346.6 RKO83962.1 - 6 6.4 13.8 9.7 5.7 0.3 2.7 1 1 0 2 2 2 0 ABC-2 family transporter protein Cu-oxidase_3 PF07732.15 RKO83963.1 - 1.2e-05 25.3 0.1 1.6e-05 24.9 0.1 1.1 1 0 0 1 1 1 1 Multicopper oxidase F-box-like PF12937.7 RKO83964.1 - 9e-06 25.5 0.9 2.1e-05 24.3 0.9 1.7 1 0 0 1 1 1 1 F-box-like LRR_6 PF13516.6 RKO83964.1 - 0.0013 18.7 5.6 0.43 10.8 0.0 3.9 4 0 0 4 4 4 2 Leucine Rich repeat LRR_4 PF12799.7 RKO83964.1 - 0.028 14.8 0.2 1.7 9.1 0.2 3.0 3 0 0 3 3 3 0 Leucine Rich repeats (2 copies) Imm68 PF15583.6 RKO83964.1 - 0.22 11.7 0.0 0.42 10.8 0.0 1.3 1 0 0 1 1 1 0 Immunity protein 68 DNA_ligase_A_N PF04675.14 RKO83965.1 - 1.1e-39 136.6 0.1 1.1e-39 136.6 0.1 1.7 2 0 0 2 2 2 1 DNA ligase N terminus SRP54 PF00448.22 RKO83967.1 - 2.7e-08 33.7 0.0 3.9e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain DUF4085 PF13315.6 RKO83967.1 - 0.02 14.5 0.0 0.048 13.3 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF4085) D5_N PF08706.11 RKO83968.1 - 5.2e-10 39.8 0.4 8.2e-10 39.1 0.4 1.3 1 1 0 1 1 1 1 D5 N terminal like Speriolin_C PF15059.6 RKO83968.1 - 0.049 13.8 0.1 0.09 12.9 0.1 1.4 1 0 0 1 1 1 0 Speriolin C-terminus Viral_protease PF08715.10 RKO83968.1 - 0.076 12.4 0.2 0.097 12.0 0.2 1.1 1 0 0 1 1 1 0 Papain like viral protease WD40 PF00400.32 RKO83969.1 - 2e-18 66.4 0.1 5.9e-07 30.1 0.0 4.4 4 0 0 4 4 4 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO83969.1 - 2.7e-10 40.4 0.0 0.053 13.8 0.0 3.3 1 1 2 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain CSTF1_dimer PF16699.5 RKO83969.1 - 2.4e-06 27.2 0.4 5.7e-06 26.0 0.0 1.8 2 0 0 2 2 2 1 Cleavage stimulation factor subunit 1, dimerisation domain Ge1_WD40 PF16529.5 RKO83969.1 - 0.0015 17.5 0.0 0.22 10.4 0.0 2.5 1 1 2 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Guanylate_cyc PF00211.20 RKO83972.1 - 6.8e-15 55.2 0.0 8.1e-15 54.9 0.0 1.0 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain UBA PF00627.31 RKO83973.1 - 2.6e-24 84.7 4.2 1.9e-11 43.6 0.9 2.3 2 0 0 2 2 2 2 UBA/TS-N domain UCH PF00443.29 RKO83973.1 - 1.7e-21 76.9 0.0 1.9e-21 76.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 RKO83973.1 - 7.7e-08 32.3 0.0 7.7e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UBA_4 PF14555.6 RKO83973.1 - 0.0014 18.4 0.4 0.0033 17.2 0.4 1.6 1 0 0 1 1 1 1 UBA-like domain CUE PF02845.16 RKO83973.1 - 0.12 12.1 0.0 0.32 10.8 0.0 1.8 1 0 0 1 1 1 0 CUE domain TauD PF02668.16 RKO83974.1 - 0.084 12.7 0.0 0.093 12.5 0.0 1.1 1 0 0 1 1 1 0 Taurine catabolism dioxygenase TauD, TfdA family ABC_tran PF00005.27 RKO83977.1 - 3e-28 99.1 0.0 4.7e-28 98.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 RKO83977.1 - 3.6e-07 29.9 0.5 6.7e-05 22.4 0.1 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 RKO83977.1 - 0.0076 16.3 0.4 0.02 14.9 0.1 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 RKO83977.1 - 0.057 13.3 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase DUF87 PF01935.17 RKO83977.1 - 0.095 12.8 0.1 0.18 11.8 0.1 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_29 PF13555.6 RKO83977.1 - 0.15 11.8 0.1 0.47 10.2 0.1 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain B56 PF01603.20 RKO83978.1 - 1.5e-191 636.9 4.7 1.7e-191 636.7 4.7 1.0 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) Sec7_N PF12783.7 RKO83978.1 - 0.011 15.7 0.6 0.92 9.4 0.1 2.7 2 1 0 2 2 2 0 Guanine nucleotide exchange factor in Golgi transport N-terminal Kelch_4 PF13418.6 RKO83981.1 - 6.8e-21 74.0 15.3 9.8e-08 31.9 0.1 5.3 5 1 0 5 5 5 3 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO83981.1 - 1.8e-13 50.1 12.0 6.5e-07 29.2 0.1 5.5 6 0 0 6 6 6 3 Kelch motif Kelch_3 PF13415.6 RKO83981.1 - 4.5e-11 42.7 11.4 0.00028 21.1 0.1 4.9 5 0 0 5 5 5 3 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO83981.1 - 1.8e-10 40.2 7.1 6e-07 29.0 0.1 4.6 4 1 0 4 4 4 3 Kelch motif Kelch_6 PF13964.6 RKO83981.1 - 1.8e-08 34.3 14.9 0.003 17.8 0.3 5.0 5 1 1 6 6 6 3 Kelch motif SH3_1 PF00018.28 RKO83981.1 - 3.5e-07 29.7 0.0 6.1e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 SH3 domain SH3_9 PF14604.6 RKO83981.1 - 8.7e-07 28.7 0.0 1.8e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 Variant SH3 domain Kelch_2 PF07646.15 RKO83981.1 - 0.0016 18.3 7.3 0.54 10.3 0.0 4.5 5 0 0 5 5 5 2 Kelch motif SH3_2 PF07653.17 RKO83981.1 - 0.0062 16.2 0.0 0.011 15.4 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain zf-rbx1 PF12678.7 RKO83984.1 - 9.9e-12 45.0 0.5 2.1e-11 43.9 0.5 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_2 PF13639.6 RKO83984.1 - 4e-09 36.7 4.3 2.1e-08 34.4 4.3 2.1 1 1 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 RKO83984.1 - 2.5e-08 33.8 0.3 5e-08 32.8 0.3 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 RKO83984.1 - 6.6e-07 29.1 0.8 9.6e-07 28.6 0.2 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 RKO83984.1 - 1.5e-05 25.0 0.3 2.6e-05 24.2 0.3 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_2 PF13923.6 RKO83984.1 - 2.7e-05 23.9 1.7 2.7e-05 23.9 1.7 2.5 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 RKO83984.1 - 0.00039 20.1 1.4 0.00039 20.1 1.4 2.6 3 0 0 3 3 3 1 RING-like zinc finger Zn_ribbon_17 PF17120.5 RKO83984.1 - 0.001 18.6 0.6 0.001 18.6 0.6 1.9 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type zf-C3HC4_3 PF13920.6 RKO83984.1 - 0.015 15.1 4.7 0.9 9.5 0.5 2.5 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 RKO83984.1 - 0.042 14.0 0.2 0.083 13.1 0.2 1.5 1 0 0 1 1 1 0 FANCL C-terminal domain zf-RING_5 PF14634.6 RKO83984.1 - 0.07 13.1 6.8 0.1 12.6 3.5 2.6 2 1 1 3 3 3 0 zinc-RING finger domain Prok-RING_4 PF14447.6 RKO83984.1 - 0.13 12.1 3.6 0.7 9.8 3.8 2.0 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 RKO83984.1 - 0.44 10.7 1.8 0.48 10.6 0.3 1.9 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING DUF5636 PF18686.1 RKO83985.1 - 0.28 11.4 0.0 0.37 11.0 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5636) Syntaxin PF00804.25 RKO83986.1 - 3.4e-22 79.1 16.2 3.4e-22 79.1 16.2 1.4 2 0 0 2 2 2 1 Syntaxin SNARE PF05739.19 RKO83986.1 - 1.6e-11 44.0 5.6 2.5e-11 43.4 0.3 3.4 4 0 0 4 4 3 1 SNARE domain Syntaxin_2 PF14523.6 RKO83986.1 - 3.1e-05 24.3 14.9 7.4e-05 23.0 5.3 2.3 2 0 0 2 2 2 1 Syntaxin-like protein Baculo_PEP_C PF04513.12 RKO83986.1 - 0.0025 17.9 11.1 0.063 13.3 2.5 2.3 2 0 0 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus Syntaxin-6_N PF09177.11 RKO83986.1 - 0.0093 16.5 12.9 0.13 12.8 1.8 3.1 1 1 2 3 3 3 2 Syntaxin 6, N-terminal SKA1 PF07160.12 RKO83986.1 - 0.01 15.7 1.6 0.01 15.7 1.6 2.2 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 1 Spectrin PF00435.21 RKO83986.1 - 0.034 14.6 13.5 0.35 11.4 2.3 3.2 2 1 1 3 3 3 0 Spectrin repeat Fib_alpha PF08702.10 RKO83986.1 - 0.044 14.0 10.0 0.5 10.6 1.3 3.1 2 1 1 3 3 3 0 Fibrinogen alpha/beta chain family COG5 PF10392.9 RKO83986.1 - 0.056 13.6 0.4 0.056 13.6 0.4 2.7 2 1 0 2 2 2 0 Golgi transport complex subunit 5 Spc7 PF08317.11 RKO83986.1 - 0.079 11.8 15.5 0.19 10.6 6.0 2.1 2 0 0 2 2 2 0 Spc7 kinetochore protein Prominin PF05478.11 RKO83986.1 - 0.086 10.8 5.7 0.082 10.9 0.5 2.0 2 0 0 2 2 2 0 Prominin Phage_Mu_Gam PF07352.12 RKO83986.1 - 0.26 11.2 6.4 0.17 11.8 1.0 2.3 2 0 0 2 2 2 0 Bacteriophage Mu Gam like protein DUF948 PF06103.11 RKO83986.1 - 0.35 11.2 7.9 3.6 7.9 0.3 3.1 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Laminin_II PF06009.12 RKO83986.1 - 0.41 10.6 12.1 0.21 11.6 1.3 2.7 2 2 1 3 3 3 0 Laminin Domain II NPV_P10 PF05531.12 RKO83986.1 - 0.7 10.4 8.3 0.99 9.9 0.9 3.1 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein BLOC1_2 PF10046.9 RKO83986.1 - 1.1 9.6 10.8 16 5.9 1.8 3.5 2 2 2 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF16 PF01519.16 RKO83986.1 - 1.3 9.5 10.6 0.77 10.3 1.0 2.4 2 1 0 2 2 2 0 Protein of unknown function DUF16 CorA PF01544.18 RKO83986.1 - 1.5 8.1 14.9 1.8 7.8 5.8 2.1 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein MCU PF04678.13 RKO83986.1 - 3.4 7.7 15.3 0.83 9.7 4.4 2.8 1 1 1 2 2 2 0 Mitochondrial calcium uniporter Allexi_40kDa PF05549.11 RKO83986.1 - 3.8 6.9 8.3 8.1 5.9 1.2 2.1 2 0 0 2 2 2 0 Allexivirus 40kDa protein XhlA PF10779.9 RKO83986.1 - 4.3 7.6 6.7 2.8 8.2 0.8 3.0 3 0 0 3 3 3 0 Haemolysin XhlA Occludin_ELL PF07303.13 RKO83986.1 - 5.2 7.9 8.9 5.4 7.8 0.3 3.3 2 1 1 3 3 3 0 Occludin homology domain SKA2 PF16740.5 RKO83986.1 - 8.1 6.3 18.3 0.047 13.5 1.9 3.3 3 1 0 3 3 3 0 Spindle and kinetochore-associated protein 2 GrpE PF01025.19 RKO83986.1 - 9.4 5.9 10.6 3.9 7.1 2.8 2.3 1 1 0 2 2 2 0 GrpE IFT57 PF10498.9 RKO83987.1 - 5.1e-37 127.7 0.2 5.7e-37 127.5 0.2 1.0 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Couple_hipA PF13657.6 RKO83988.1 - 0.06 14.0 0.2 3 8.6 0.0 2.3 2 0 0 2 2 2 0 HipA N-terminal domain F-box-like PF12937.7 RKO83989.1 - 1.1e-05 25.2 2.6 3.3e-05 23.7 0.6 2.7 2 1 0 2 2 2 1 F-box-like UDP-g_GGTase PF06427.11 RKO83990.1 - 3.3e-37 126.9 0.0 7.3e-37 125.8 0.0 1.6 1 0 0 1 1 1 1 UDP-glucose:Glycoprotein Glucosyltransferase Glyco_transf_24 PF18404.1 RKO83990.1 - 4.2e-08 32.9 0.1 6e-08 32.4 0.1 1.2 1 0 0 1 1 1 1 Glucosyltransferase 24 Thioredoxin_15 PF18403.1 RKO83990.1 - 0.00027 20.9 0.1 0.00041 20.3 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin-like domain FOXP-CC PF16159.5 RKO83991.1 - 2.1 9.0 9.7 10 6.9 5.3 2.3 1 1 1 2 2 2 0 FOXP coiled-coil domain zf-C2H2_4 PF13894.6 RKO83991.1 - 3.5 8.7 9.8 3.8 8.6 0.6 3.2 3 0 0 3 3 3 0 C2H2-type zinc finger Tyrosinase PF00264.20 RKO83992.1 - 2.4e-20 73.8 2.4 3.4e-20 73.3 2.4 1.3 1 0 0 1 1 1 1 Common central domain of tyrosinase TPT PF03151.16 RKO83994.1 - 1.1e-08 34.8 6.1 1.6e-08 34.3 6.1 1.2 1 0 0 1 1 1 1 Triose-phosphate Transporter family Nuc_sug_transp PF04142.15 RKO83994.1 - 1.4e-07 31.0 0.4 2.2e-07 30.4 0.4 1.3 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 RKO83994.1 - 1.6e-07 31.6 24.4 7.3e-05 23.0 2.6 3.2 3 0 0 3 3 3 2 EamA-like transporter family PUNUT PF16913.5 RKO83994.1 - 0.00042 19.6 3.0 0.00042 19.6 3.0 1.8 2 0 0 2 2 2 1 Purine nucleobase transmembrane transport Fumarate_red_C PF02300.17 RKO83994.1 - 0.034 14.2 0.6 0.034 14.2 0.6 2.0 2 0 0 2 2 2 0 Fumarate reductase subunit C RdRP PF05183.12 RKO83996.1 - 7.8e-57 193.2 0.0 9.6e-57 192.9 0.0 1.1 1 0 0 1 1 1 1 RNA dependent RNA polymerase Pkinase PF00069.25 RKO83997.1 - 1.9e-31 109.4 0.0 2.1e-31 109.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO83997.1 - 2.7e-06 26.8 0.0 3.1e-06 26.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 RKO84002.1 - 3.2e-26 92.3 0.3 3.9e-26 92.0 0.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO84002.1 - 5.2e-12 45.6 0.2 6.8e-12 45.2 0.2 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO84002.1 - 1.1e-07 31.0 0.1 1.4e-07 30.7 0.1 1.1 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 RKO84002.1 - 0.0061 16.2 0.0 0.0092 15.6 0.0 1.3 1 0 0 1 1 1 1 RIO1 family Kinase-like PF14531.6 RKO84002.1 - 0.036 13.4 0.1 0.081 12.2 0.0 1.5 2 0 0 2 2 2 0 Kinase-like DHFR_1 PF00186.19 RKO84003.1 - 7.8e-37 126.4 0.0 9.6e-37 126.2 0.0 1.0 1 0 0 1 1 1 1 Dihydrofolate reductase UPF0767 PF15990.5 RKO84004.1 - 0.13 12.5 11.1 20 5.4 1.4 5.4 1 1 7 8 8 8 0 UPF0767 family U1snRNP70_N PF12220.8 RKO84004.1 - 0.24 12.0 16.8 5.3 7.8 0.5 4.8 1 1 2 3 3 3 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal CBM_1 PF00734.18 RKO84006.1 - 0.0085 16.0 0.9 1.4 8.9 0.0 2.6 3 0 0 3 3 3 2 Fungal cellulose binding domain IGFBP PF00219.18 RKO84006.1 - 0.12 13.1 1.8 5.6 7.7 0.1 2.4 2 0 0 2 2 2 0 Insulin-like growth factor binding protein Excalibur PF05901.11 RKO84007.1 - 0.54 10.9 3.8 18 6.0 0.5 3.4 3 0 0 3 3 3 0 Excalibur calcium-binding domain HTH_39 PF14090.6 RKO84008.1 - 0.031 14.0 0.2 0.1 12.4 0.2 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain Zwilch PF09817.9 RKO84011.1 - 0.19 10.2 0.0 2.8 6.3 0.0 2.0 2 0 0 2 2 2 0 RZZ complex, subunit zwilch RRM_1 PF00076.22 RKO84012.1 - 1.5e-13 50.4 0.0 1.7e-13 50.1 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SAP130_C PF16014.5 RKO84013.1 - 2.6 7.0 11.6 3 6.8 11.6 1.1 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus DUF2749 PF10907.8 RKO84013.1 - 3.3 7.9 5.7 4.3 7.6 1.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2749) SOG2 PF10428.9 RKO84014.1 - 6.3 5.9 27.5 10 5.2 27.5 1.3 1 0 0 1 1 1 0 RAM signalling pathway protein DNA_pol_B PF00136.21 RKO84015.1 - 1.7e-20 73.2 0.0 1.4e-13 50.4 0.0 2.2 1 1 1 2 2 2 2 DNA polymerase family B DNA_ligase_A_N PF04675.14 RKO84018.1 - 7.5e-06 26.4 0.0 8e-06 26.3 0.0 1.1 1 0 0 1 1 1 1 DNA ligase N terminus Sec63 PF02889.16 RKO84019.1 - 1.2e-65 221.2 0.0 1.8e-65 220.6 0.0 1.3 1 0 0 1 1 1 1 Sec63 Brl domain adh_short PF00106.25 RKO84022.1 - 6e-07 29.1 0.0 6.4e-07 29.0 0.0 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 RKO84022.1 - 9.8e-07 28.9 0.1 1.1e-06 28.7 0.1 1.0 1 0 0 1 1 1 1 KR domain NAD_binding_10 PF13460.6 RKO84022.1 - 0.015 15.2 0.1 0.017 15.1 0.1 1.0 1 0 0 1 1 1 0 NAD(P)H-binding RNase_P_p30 PF01876.16 RKO84025.1 - 2.8e-47 160.9 0.0 3.3e-47 160.7 0.0 1.0 1 0 0 1 1 1 1 RNase P subunit p30 DUF249 PF03158.13 RKO84025.1 - 0.081 12.6 0.0 0.093 12.4 0.0 1.2 1 0 0 1 1 1 0 Multigene family 530 protein BAH PF01426.18 RKO84026.1 - 4e-09 36.4 0.0 1.7e-08 34.3 0.0 1.9 2 0 0 2 2 2 1 BAH domain Transmemb_17 PF09799.9 RKO84027.1 - 9.2e-14 51.9 1.7 1.4e-13 51.4 1.6 1.4 1 1 0 1 1 1 1 Predicted membrane protein DNA_pol_phi PF04931.13 RKO84029.1 - 1.9 6.5 2.7 1.6 6.8 2.7 1.1 1 0 0 1 1 1 0 DNA polymerase phi Mannosyl_trans3 PF11051.8 RKO84030.1 - 1.5e-37 129.4 0.0 9.1e-37 126.9 0.0 1.8 1 1 0 1 1 1 1 Mannosyltransferase putative Kelch_4 PF13418.6 RKO84031.1 - 1.2e-06 28.4 10.0 0.0082 16.1 0.2 3.7 2 1 1 3 3 3 2 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO84031.1 - 4.3e-05 23.6 15.8 0.0012 19.1 0.4 5.3 5 1 1 6 6 6 2 Kelch motif Kelch_5 PF13854.6 RKO84031.1 - 0.028 14.4 14.0 0.11 12.6 0.4 3.6 2 1 1 3 3 3 0 Kelch motif DUF3980 PF13140.6 RKO84032.1 - 0.14 12.7 0.0 0.14 12.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3980) LRR_6 PF13516.6 RKO84034.1 - 0.00019 21.2 0.8 0.012 15.6 0.0 2.8 2 0 0 2 2 2 2 Leucine Rich repeat PHD PF00628.29 RKO84035.1 - 4.6e-11 42.4 5.7 4.6e-11 42.4 5.7 2.6 3 0 0 3 3 3 1 PHD-finger PHD_2 PF13831.6 RKO84035.1 - 0.016 14.8 6.0 0.063 12.9 6.0 2.1 1 1 0 1 1 1 0 PHD-finger Prok-RING_1 PF14446.6 RKO84035.1 - 0.048 13.6 14.6 0.037 14.0 4.7 3.4 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 DZR PF12773.7 RKO84035.1 - 0.43 10.7 11.1 34 4.6 0.3 3.6 2 1 0 2 2 2 0 Double zinc ribbon C1_1 PF00130.22 RKO84035.1 - 5.9 6.9 13.2 0.18 11.8 1.5 3.2 4 0 0 4 4 4 0 Phorbol esters/diacylglycerol binding domain (C1 domain) PHD_4 PF16866.5 RKO84035.1 - 6.1 7.0 11.9 2.1 8.5 5.6 2.9 3 0 0 3 3 3 0 PHD-finger Otopetrin PF03189.13 RKO84036.1 - 0.021 13.7 2.4 0.022 13.6 2.4 1.1 1 0 0 1 1 1 0 Otopetrin MCU PF04678.13 RKO84036.1 - 0.023 14.8 7.0 0.028 14.5 7.0 1.1 1 0 0 1 1 1 0 Mitochondrial calcium uniporter GREB1 PF15782.5 RKO84036.1 - 0.026 11.7 8.5 0.028 11.6 8.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer EPL1 PF10513.9 RKO84036.1 - 0.07 13.5 10.8 0.11 12.9 10.8 1.4 1 0 0 1 1 1 0 Enhancer of polycomb-like Linker_histone PF00538.19 RKO84036.1 - 0.14 12.5 0.0 0.27 11.6 0.0 1.4 1 0 0 1 1 1 0 linker histone H1 and H5 family MAP7 PF05672.11 RKO84036.1 - 0.17 11.6 21.3 0.24 11.1 21.3 1.2 1 0 0 1 1 1 0 MAP7 (E-MAP-115) family FAM222A PF15258.6 RKO84036.1 - 0.23 10.6 39.5 0.32 10.1 39.5 1.1 1 0 0 1 1 1 0 Protein family of FAM222A WTX PF09422.10 RKO84036.1 - 0.27 10.2 9.8 0.35 9.9 9.8 1.1 1 0 0 1 1 1 0 WTX protein SLC12 PF03522.15 RKO84036.1 - 0.3 10.1 11.5 0.32 9.9 11.5 1.1 1 0 0 1 1 1 0 Solute carrier family 12 MMR1 PF08505.10 RKO84036.1 - 0.33 11.2 17.2 0.58 10.4 17.2 1.4 1 0 0 1 1 1 0 Mitochondrial Myo2 receptor-related protein RR_TM4-6 PF06459.12 RKO84036.1 - 0.47 10.3 12.8 0.57 10.0 12.8 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 PAT1 PF09770.9 RKO84036.1 - 0.49 8.6 34.6 0.6 8.3 34.6 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 Neur_chan_memb PF02932.16 RKO84036.1 - 0.72 9.9 10.6 0.88 9.6 10.6 1.2 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region RepL PF05732.11 RKO84036.1 - 1.5 8.2 4.1 2.1 7.8 0.0 2.2 2 0 0 2 2 2 0 Firmicute plasmid replication protein (RepL) Lin-8 PF03353.15 RKO84036.1 - 1.7 8.1 20.7 2.2 7.7 20.7 1.1 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Presenilin PF01080.17 RKO84036.1 - 2.1 7.0 17.2 2.5 6.7 17.2 1.1 1 0 0 1 1 1 0 Presenilin Asp-B-Hydro_N PF05279.11 RKO84036.1 - 2.4 8.1 8.8 3.3 7.7 8.8 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region Exonuc_VII_L PF02601.15 RKO84036.1 - 2.6 7.5 15.6 3.5 7.1 15.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Endostatin PF06482.11 RKO84036.1 - 2.9 7.3 18.8 3.6 7.0 18.8 1.1 1 0 0 1 1 1 0 Collagenase NC10 and Endostatin CDK5_activator PF03261.15 RKO84036.1 - 3.1 7.2 11.0 3.6 7.0 11.0 1.1 1 0 0 1 1 1 0 Cyclin-dependent kinase 5 activator protein CLPTM1 PF05602.12 RKO84036.1 - 3.8 6.4 9.8 4.6 6.1 9.8 1.0 1 0 0 1 1 1 0 Cleft lip and palate transmembrane protein 1 (CLPTM1) ALMT PF11744.8 RKO84036.1 - 3.8 6.2 13.7 5 5.8 13.7 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Velvet PF11754.8 RKO84036.1 - 5.3 6.9 18.9 7.2 6.5 18.9 1.2 1 0 0 1 1 1 0 Velvet factor Macoilin PF09726.9 RKO84036.1 - 6.1 5.3 15.1 9.7 4.6 15.1 1.3 1 0 0 1 1 1 0 Macoilin family FAM60A PF15396.6 RKO84036.1 - 7.3 6.5 9.9 9.4 6.2 9.9 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Hydin_ADK PF17213.3 RKO84036.1 - 7.4 6.8 12.7 12 6.2 12.7 1.4 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain Hid1 PF12722.7 RKO84036.1 - 9.6 4.2 14.2 11 4.0 14.2 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Mg_trans_NIPA PF05653.14 RKO84037.1 - 3.9e-96 321.7 19.3 4.8e-96 321.4 19.3 1.0 1 0 0 1 1 1 1 Magnesium transporter NIPA EamA PF00892.20 RKO84037.1 - 1.4e-06 28.6 33.1 3.9e-06 27.1 5.1 3.5 3 1 0 3 3 3 2 EamA-like transporter family CdiI_N PF18228.1 RKO84037.1 - 0.17 11.7 0.1 0.31 10.9 0.1 1.3 1 0 0 1 1 1 0 CdiI N-terminal domain TSC22 PF01166.18 RKO84038.1 - 0.00037 20.7 0.7 0.0024 18.1 0.7 2.5 1 0 0 1 1 1 1 TSC-22/dip/bun family ssDNA_DBD PF18333.1 RKO84038.1 - 0.007 16.5 5.1 0.9 9.7 0.6 2.7 2 0 0 2 2 2 2 Non-canonical single-stranded DNA-binding domain RICH PF05062.12 RKO84038.1 - 0.18 12.2 5.4 11 6.5 0.2 3.0 2 0 0 2 2 2 0 RICH domain Pox_A_type_inc PF04508.12 RKO84038.1 - 0.26 11.2 7.7 0.05 13.5 1.9 3.0 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat DUF713 PF05218.14 RKO84038.1 - 0.33 10.7 4.4 1.9 8.2 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF713) Ank_2 PF12796.7 RKO84039.1 - 0.00039 21.0 0.0 0.00066 20.2 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO84039.1 - 0.00087 19.8 0.0 0.0018 18.8 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO84039.1 - 0.074 13.6 0.0 0.37 11.5 0.0 2.2 2 0 0 2 2 2 0 Ankyrin repeat Osmo_CC PF08946.10 RKO84039.1 - 0.14 12.4 0.1 0.32 11.3 0.1 1.6 1 0 0 1 1 1 0 Osmosensory transporter coiled coil DSBA PF01323.20 RKO84040.1 - 2e-23 83.2 0.1 2.2e-23 83.0 0.1 1.0 1 0 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 RKO84040.1 - 3.7e-06 27.2 0.0 4.2e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_3 PF13192.6 RKO84040.1 - 3.5e-05 23.8 0.1 6.9e-05 22.8 0.0 1.7 1 1 1 2 2 2 1 Thioredoxin domain Thioredoxin_5 PF13743.6 RKO84040.1 - 0.0063 16.2 0.0 0.0071 16.1 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin LppX_LprAFG PF07161.13 RKO84040.1 - 0.029 14.2 0.0 0.032 14.1 0.0 1.1 1 0 0 1 1 1 0 LppX_LprAFG lipoprotein Swi3 PF07962.12 RKO84040.1 - 0.03 14.3 0.0 0.052 13.5 0.0 1.4 1 0 0 1 1 1 0 Replication Fork Protection Component Swi3 Pkinase PF00069.25 RKO84041.1 - 4.9e-20 72.0 0.0 3.4e-13 49.6 0.0 2.1 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 RKO84041.1 - 4.4e-10 39.3 0.0 7.8e-06 25.4 0.0 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase BUD22 PF09073.10 RKO84041.1 - 0.0015 18.0 7.2 0.0019 17.7 7.2 1.1 1 0 0 1 1 1 1 BUD22 Nop14 PF04147.12 RKO84041.1 - 0.11 10.7 11.4 0.15 10.3 11.4 1.1 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 RKO84041.1 - 0.21 11.0 9.1 0.26 10.7 9.1 1.2 1 0 0 1 1 1 0 SDA1 TFIIA PF03153.13 RKO84041.1 - 1.4 8.8 10.9 1.7 8.6 10.9 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF2722 PF10846.8 RKO84041.1 - 2.1 7.2 6.1 2.9 6.7 6.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) FAM176 PF14851.6 RKO84041.1 - 6.6 6.4 5.9 15 5.2 5.9 1.6 1 0 0 1 1 1 0 FAM176 family Cyt-b5 PF00173.28 RKO84043.1 - 2.6e-21 75.6 0.0 3.4e-21 75.2 0.0 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain DUF3035 PF11233.8 RKO84046.1 - 0.021 15.1 0.2 0.046 14.0 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3035) Remorin_C PF03763.13 RKO84046.1 - 0.05 13.5 1.4 0.083 12.8 1.4 1.3 1 0 0 1 1 1 0 Remorin, C-terminal region PRKG1_interact PF15898.5 RKO84046.1 - 0.29 12.0 2.5 0.48 11.4 1.7 1.7 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain Pkinase PF00069.25 RKO84047.1 - 3.8e-12 46.1 0.2 4.2e-12 46.0 0.2 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO84047.1 - 3e-06 26.7 0.1 3.2e-06 26.6 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase ADIP PF11559.8 RKO84048.1 - 3e-23 82.6 7.8 3e-23 82.6 7.8 1.5 2 0 0 2 2 2 1 Afadin- and alpha -actinin-Binding SlyX PF04102.12 RKO84048.1 - 0.086 13.5 7.3 2.2 9.0 2.3 3.1 3 0 0 3 3 3 0 SlyX CEP63 PF17045.5 RKO84048.1 - 0.098 12.5 13.1 0.15 11.9 12.5 1.7 1 1 0 1 1 1 0 Centrosomal protein of 63 kDa CENP-K PF11802.8 RKO84048.1 - 0.12 11.9 10.2 0.48 9.9 10.0 1.9 1 1 1 2 2 2 0 Centromere-associated protein K TPR_MLP1_2 PF07926.12 RKO84048.1 - 0.57 10.2 18.9 0.24 11.5 9.0 2.9 2 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein V_ATPase_I PF01496.19 RKO84048.1 - 0.83 7.5 3.8 1 7.2 3.8 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family LMBR1 PF04791.16 RKO84048.1 - 1.7 7.5 3.6 1.9 7.3 3.6 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Spc7 PF08317.11 RKO84048.1 - 2 7.3 15.6 0.61 8.9 12.4 1.8 2 1 0 2 2 2 0 Spc7 kinetochore protein Fez1 PF06818.15 RKO84048.1 - 3.7 8.0 15.9 8 6.9 15.9 1.6 1 1 0 1 1 1 0 Fez1 Golgin_A5 PF09787.9 RKO84048.1 - 5.4 6.4 16.7 0.38 10.2 11.1 1.8 2 1 0 2 2 2 0 Golgin subfamily A member 5 MRC1 PF09444.10 RKO84049.1 - 4.3e-19 69.5 11.7 4.3e-19 69.5 11.7 6.3 5 2 1 6 6 6 1 MRC1-like domain KorB PF08535.10 RKO84049.1 - 0.11 12.5 0.1 0.2 11.7 0.1 1.3 1 0 0 1 1 1 0 KorB domain adh_short_C2 PF13561.6 RKO84053.1 - 2.1e-51 174.7 0.2 2.5e-51 174.5 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO84053.1 - 6.2e-40 136.8 0.1 7.6e-40 136.5 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 RKO84053.1 - 3.8e-05 23.7 0.0 5.2e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 KR domain PC_rep PF01851.22 RKO84054.1 - 3.2e-29 99.9 23.6 3e-06 27.4 0.2 7.3 7 0 0 7 7 7 6 Proteasome/cyclosome repeat HEAT_2 PF13646.6 RKO84054.1 - 5.9e-15 55.4 2.3 1.4e-09 38.2 0.0 4.0 3 1 1 4 4 4 2 HEAT repeats HEAT PF02985.22 RKO84054.1 - 0.00035 20.6 0.1 0.66 10.4 0.1 4.6 6 0 0 6 6 6 1 HEAT repeat HEAT_EZ PF13513.6 RKO84054.1 - 0.00079 19.9 0.7 0.083 13.4 0.0 3.9 3 1 1 4 4 4 1 HEAT-like repeat Arm PF00514.23 RKO84054.1 - 0.0059 16.6 0.0 13 6.0 0.0 3.7 3 0 0 3 3 3 2 Armadillo/beta-catenin-like repeat HEAT_PBS PF03130.16 RKO84054.1 - 1 10.3 5.2 13 6.8 0.0 4.6 5 0 0 5 5 5 0 PBS lyase HEAT-like repeat DUF4813 PF16072.5 RKO84054.1 - 2.3 7.8 9.2 1.4 8.5 1.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4813) Glyco_hydro_18 PF00704.28 RKO84055.1 - 1.3e-49 169.7 0.1 1.6e-49 169.4 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 DUF1712 PF08217.11 RKO84056.1 - 0.094 11.2 0.0 0.11 10.9 0.0 1.2 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1712) Aminotran_1_2 PF00155.21 RKO84057.1 - 1.5e-25 90.2 0.0 1.8e-25 89.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II PNTB_4TM PF12769.7 RKO84058.1 - 1.2 9.7 10.9 0.084 13.4 2.5 2.6 3 0 0 3 3 3 0 4TM region of pyridine nucleotide transhydrogenase, mitoch adh_short PF00106.25 RKO84059.1 - 4.6e-08 32.8 0.0 5.2e-08 32.6 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO84059.1 - 4.9e-05 23.0 0.0 5.9e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase THF_DHG_CYH_C PF02882.19 RKO84059.1 - 0.022 14.1 0.0 0.026 13.9 0.0 1.1 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KR PF08659.10 RKO84059.1 - 0.029 14.3 0.0 0.032 14.2 0.0 1.1 1 0 0 1 1 1 0 KR domain AdoHcyase_NAD PF00670.21 RKO84059.1 - 0.051 13.6 0.3 0.063 13.3 0.3 1.1 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RICTOR_N PF14664.6 RKO84060.1 - 0.016 14.2 0.0 0.018 14.1 0.0 1.1 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, N-term WD40 PF00400.32 RKO84060.1 - 0.076 13.9 0.0 3 8.9 0.0 2.4 2 0 0 2 2 2 0 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO84060.1 - 0.14 12.5 0.0 0.24 11.7 0.0 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain TMPIT PF07851.13 RKO84061.1 - 2.1e-23 83.1 2.3 2.6e-23 82.8 2.3 1.1 1 0 0 1 1 1 1 TMPIT-like protein Metallopep PF12044.8 RKO84064.1 - 0.00062 18.5 0.0 0.0008 18.1 0.0 1.2 1 0 0 1 1 1 1 Putative peptidase family ICMT PF04140.14 RKO84065.1 - 8.5e-08 32.5 1.2 1.8e-07 31.4 0.1 2.0 1 1 1 2 2 2 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family Type2_restr_D3 PF16902.5 RKO84067.1 - 0.078 12.9 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 Type-2 restriction enzyme D3 domain CALCOCO1 PF07888.11 RKO84068.1 - 0.037 12.9 29.8 0.046 12.6 29.8 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like CRR7 PF12095.8 RKO84068.1 - 0.26 11.8 9.8 1.5 9.3 0.4 3.7 2 2 2 4 4 4 0 Protein CHLORORESPIRATORY REDUCTION 7 Golgin_A5 PF09787.9 RKO84068.1 - 0.46 9.9 25.6 1.2 8.5 7.3 2.1 1 1 1 2 2 2 0 Golgin subfamily A member 5 ApoO PF09769.9 RKO84068.1 - 1.4 8.9 5.0 5.3 7.0 0.6 2.7 2 1 1 3 3 3 0 Apolipoprotein O GAGA_bind PF06217.12 RKO84068.1 - 3.1 8.0 17.3 5.7 7.1 17.3 1.4 1 1 0 1 1 1 0 GAGA binding protein-like family Nre_C PF04895.12 RKO84068.1 - 3.9 7.4 7.1 6.3 6.8 1.0 2.8 2 1 0 2 2 2 0 Archaeal Nre, C-terminal V_ATPase_I PF01496.19 RKO84068.1 - 4.5 5.1 10.4 5.5 4.8 10.4 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family ADIP PF11559.8 RKO84068.1 - 4.9 7.2 30.1 10 6.2 13.0 2.8 2 1 1 3 3 3 0 Afadin- and alpha -actinin-Binding FAM76 PF16046.5 RKO84069.1 - 0.44 9.9 9.1 0.93 8.8 9.1 1.5 1 0 0 1 1 1 0 FAM76 protein CAP59_mtransfer PF11735.8 RKO84069.1 - 2.1 8.0 6.0 3.4 7.3 5.5 1.4 1 1 0 1 1 1 0 Cryptococcal mannosyltransferase 1 TSC22 PF01166.18 RKO84069.1 - 6.3 7.2 9.7 22 5.4 1.1 3.4 2 1 1 3 3 3 0 TSC-22/dip/bun family DnaJ PF00226.31 RKO84070.1 - 1.1e-18 67.1 0.0 1.4e-18 66.7 0.0 1.2 1 0 0 1 1 1 1 DnaJ domain Rotamase PF00639.21 RKO84071.1 - 1.7e-19 70.5 0.0 2.1e-19 70.2 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 RKO84071.1 - 2.6e-15 57.0 0.1 3.3e-15 56.7 0.1 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain WW PF00397.26 RKO84071.1 - 9.1e-08 32.1 0.4 1.6e-07 31.2 0.4 1.5 1 0 0 1 1 1 1 WW domain DNA_pol_E_B PF04042.16 RKO84072.1 - 7.6e-36 123.4 0.1 9.6e-36 123.1 0.1 1.1 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B CENP-T_C PF15511.6 RKO84073.1 - 4.2e-08 33.3 0.1 5.3e-08 33.0 0.1 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 RKO84073.1 - 1.3e-05 25.4 0.0 1.7e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 RKO84073.1 - 0.0002 21.7 0.1 0.00023 21.5 0.1 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID_20kDa PF03847.13 RKO84073.1 - 0.0054 17.2 0.1 0.0097 16.4 0.1 1.4 1 1 0 1 1 1 1 Transcription initiation factor TFIID subunit A TFIID-31kDa PF02291.15 RKO84073.1 - 0.0095 16.0 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit Motilin_assoc PF04643.12 RKO84073.1 - 0.052 13.4 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Motilin/ghrelin-associated peptide CENP-S PF15630.6 RKO84073.1 - 0.068 13.6 0.2 0.076 13.4 0.2 1.3 1 1 0 1 1 1 0 CENP-S protein Cullin PF00888.22 RKO84075.1 - 1.6e-54 185.6 0.6 1.8e-54 185.4 0.6 1.0 1 0 0 1 1 1 1 Cullin family TRF PF08558.10 RKO84075.1 - 0.04 13.5 0.1 0.052 13.1 0.1 1.2 1 0 0 1 1 1 0 Telomere repeat binding factor (TRF) Sel1 PF08238.12 RKO84078.1 - 4.1e-08 33.6 0.5 0.00022 21.8 0.2 3.4 3 0 0 3 3 3 2 Sel1 repeat Aldedh PF00171.22 RKO84079.1 - 5.3e-122 407.6 0.0 6.1e-122 407.4 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Nup153 PF08604.10 RKO84081.1 - 0.052 12.4 4.5 0.12 11.2 4.5 1.5 1 0 0 1 1 1 0 Nucleoporin Nup153-like AstE_AspA PF04952.14 RKO84083.1 - 2e-35 122.3 0.0 2.3e-35 122.1 0.0 1.0 1 0 0 1 1 1 1 Succinylglutamate desuccinylase / Aspartoacylase family WD40 PF00400.32 RKO84085.1 - 2.3e-22 78.8 13.4 8.6e-08 32.7 1.4 4.7 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO84085.1 - 1.4e-11 44.5 1.7 9e-05 22.7 0.1 4.0 2 1 2 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 RKO84085.1 - 4e-07 30.1 0.2 2.9e-05 24.0 0.1 2.8 2 1 1 3 3 3 2 Eukaryotic translation initiation factor eIF2A IKI3 PF04762.12 RKO84085.1 - 0.0039 15.3 0.7 0.11 10.5 0.3 2.0 1 1 1 2 2 2 2 IKI3 family Ge1_WD40 PF16529.5 RKO84085.1 - 0.079 11.9 0.1 5.9 5.8 0.0 2.4 2 1 1 3 3 3 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Coatomer_WDAD PF04053.14 RKO84085.1 - 0.2 10.7 0.1 0.51 9.3 0.1 1.7 1 1 1 2 2 2 0 Coatomer WD associated region MscS_porin PF12795.7 RKO84087.1 - 0.013 15.0 0.7 0.023 14.2 0.2 1.6 2 0 0 2 2 2 0 Mechanosensitive ion channel porin domain Pkinase PF00069.25 RKO84088.1 - 3e-59 200.6 0.0 3.5e-59 200.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO84088.1 - 3.2e-28 98.7 0.0 4.1e-28 98.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO84088.1 - 0.00018 20.4 0.5 0.00031 19.6 0.5 1.6 1 1 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 RKO84088.1 - 0.0014 18.0 0.7 0.014 14.8 0.7 2.2 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 RKO84088.1 - 0.0038 17.2 0.5 0.0096 15.9 0.5 1.5 1 1 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 RKO84088.1 - 0.0068 15.8 0.6 0.012 15.0 0.6 1.5 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family LptF_LptG PF03739.14 RKO84091.1 - 0.17 10.7 4.0 1.4 7.7 0.2 2.0 2 0 0 2 2 2 0 Lipopolysaccharide export system permease LptF/LptG LapA_dom PF06305.11 RKO84091.1 - 0.7 9.8 3.5 24 4.8 0.0 2.3 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain GAF PF01590.26 RKO84093.1 - 1.5e-24 87.1 0.2 2.4e-16 60.6 0.0 2.4 2 0 0 2 2 2 2 GAF domain GAF_2 PF13185.6 RKO84093.1 - 2.5e-22 79.7 1.3 1.1e-11 45.2 0.0 2.4 2 0 0 2 2 2 2 GAF domain GAF_3 PF13492.6 RKO84093.1 - 2e-11 44.3 0.1 3.2e-05 24.3 0.0 2.7 2 0 0 2 2 2 2 GAF domain TPH PF13868.6 RKO84097.1 - 3.6e-14 52.1 109.4 1.6e-11 43.3 84.2 2.0 2 0 0 2 2 2 2 Trichohyalin-plectin-homology domain DUF1601 PF07671.11 RKO84097.1 - 0.0092 15.8 0.8 0.081 12.8 0.2 2.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1601) CDP-OH_P_transf PF01066.21 RKO84099.1 - 5.7e-11 43.0 0.6 7.7e-11 42.6 0.6 1.2 1 0 0 1 1 1 1 CDP-alcohol phosphatidyltransferase Ank_4 PF13637.6 RKO84102.1 - 6.3e-07 29.8 0.0 0.017 15.7 0.0 3.5 3 0 0 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO84102.1 - 0.00016 22.2 0.0 0.0069 16.9 0.0 2.5 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO84102.1 - 0.0014 18.9 0.8 8.4 7.3 0.0 4.6 4 2 2 6 6 6 1 Ankyrin repeat DUF2457 PF10446.9 RKO84102.1 - 0.15 11.2 5.2 0.19 10.9 5.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) F-box PF00646.33 RKO84102.1 - 0.54 10.2 3.0 18 5.3 0.1 2.3 2 0 0 2 2 2 0 F-box domain CENP-B_dimeris PF09026.10 RKO84102.1 - 1.8 9.0 14.0 0.072 13.5 7.4 2.0 2 0 0 2 2 2 0 Centromere protein B dimerisation domain NOA36 PF06524.12 RKO84102.1 - 6.2 6.1 8.5 9.5 5.4 8.5 1.2 1 0 0 1 1 1 0 NOA36 protein Tctex-1 PF03645.13 RKO84107.1 - 1.8e-23 82.7 0.0 2.2e-23 82.4 0.0 1.1 1 0 0 1 1 1 1 Tctex-1 family RINT1_TIP1 PF04437.13 RKO84108.1 - 0.00096 18.2 0.0 0.001 18.1 0.0 1.1 1 0 0 1 1 1 1 RINT-1 / TIP-1 family Tudor-knot PF11717.8 RKO84109.1 - 0.00065 19.5 0.0 0.0011 18.8 0.0 1.4 1 0 0 1 1 1 1 RNA binding activity-knot of a chromodomain Tmemb_14 PF03647.13 RKO84111.1 - 3.6e-10 40.4 0.6 4e-10 40.3 0.6 1.0 1 0 0 1 1 1 1 Transmembrane proteins 14C Aim19 PF10315.9 RKO84111.1 - 0.011 16.0 0.4 0.013 15.8 0.4 1.2 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 19 YabA PF06156.13 RKO84112.1 - 3 8.5 16.2 7.4 7.3 1.9 4.2 2 1 2 4 4 4 0 Initiation control protein YabA DUF4061 PF13270.6 RKO84112.1 - 7 7.0 9.6 6.7 7.1 0.3 3.3 1 1 3 4 4 4 0 Domain of unknown function (DUF4061) Acetyltransf_1 PF00583.25 RKO84113.1 - 6.3e-16 58.7 0.0 7.2e-16 58.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 RKO84113.1 - 4e-10 40.0 0.0 5e-10 39.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 RKO84113.1 - 8.5e-10 38.7 0.0 1e-09 38.4 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 RKO84113.1 - 5.8e-09 35.8 0.1 6.8e-09 35.6 0.1 1.1 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.6 RKO84113.1 - 2.2e-05 24.2 0.0 2.5e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 RKO84113.1 - 5e-05 24.0 0.0 6.3e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 RKO84113.1 - 0.0063 16.7 0.0 0.0071 16.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 RKO84113.1 - 0.0066 16.5 0.0 0.0075 16.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain PanZ PF12568.8 RKO84113.1 - 0.014 15.1 0.0 0.016 14.9 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_CG PF14542.6 RKO84113.1 - 0.057 13.6 0.1 0.084 13.0 0.1 1.4 1 1 0 1 1 1 0 GCN5-related N-acetyl-transferase Plasmodium_HRP PF05403.11 RKO84114.1 - 1.2e-05 25.2 64.0 1.8e-05 24.6 64.0 1.1 1 0 0 1 1 1 1 Plasmodium histidine-rich protein (HRPII/III) Syntaxin PF00804.25 RKO84115.1 - 7.7e-16 58.4 15.6 9.6e-16 58.1 15.6 1.1 1 0 0 1 1 1 1 Syntaxin DUF1759 PF03564.15 RKO84115.1 - 0.03 14.3 5.1 2.3 8.1 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1759) VitD-bind_III PF09164.10 RKO84115.1 - 0.11 12.5 0.0 0.32 11.0 0.0 1.7 1 0 0 1 1 1 0 Vitamin D binding protein, domain III AAA_22 PF13401.6 RKO84115.1 - 0.21 11.9 2.4 0.27 11.5 0.4 2.1 1 1 1 2 2 2 0 AAA domain Ntox15 PF15604.6 RKO84115.1 - 0.28 11.3 7.8 0.86 9.7 8.0 1.8 1 1 0 1 1 1 0 Novel toxin 15 V_ATPase_prox PF18274.1 RKO84115.1 - 0.35 10.9 2.3 0.32 11.0 0.2 2.0 2 0 0 2 2 2 0 Vacuolar ATPase Subunit I N-terminal proximal lobe XhlA PF10779.9 RKO84115.1 - 0.57 10.4 3.6 8.9 6.6 0.0 3.2 3 0 0 3 3 3 0 Haemolysin XhlA PCRF PF03462.18 RKO84115.1 - 0.73 9.7 8.7 0.38 10.6 0.9 2.5 1 1 2 3 3 3 0 PCRF domain Fzo_mitofusin PF04799.13 RKO84115.1 - 1.7 8.1 8.3 2 8.0 1.7 2.8 3 0 0 3 3 3 0 fzo-like conserved region BLOC1_2 PF10046.9 RKO84115.1 - 2.7 8.3 11.5 1.7 9.0 2.2 3.5 3 1 0 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Arm PF00514.23 RKO84118.1 - 0.1 12.7 0.1 0.1 12.7 0.1 4.3 4 0 0 4 4 4 0 Armadillo/beta-catenin-like repeat TAF6_C PF07571.13 RKO84118.1 - 0.15 12.4 0.0 1.6 9.1 0.0 2.4 2 0 0 2 2 2 0 TAF6 C-terminal HEAT repeat domain F-box-like PF12937.7 RKO84119.1 - 9.3e-05 22.2 0.2 0.00019 21.3 0.2 1.5 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO84119.1 - 0.042 13.7 0.4 0.14 12.1 0.4 1.9 1 1 0 1 1 1 0 F-box domain FMO-like PF00743.19 RKO84121.1 - 3.3e-09 35.7 0.0 4.3e-09 35.4 0.0 1.1 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like TIP49 PF06068.13 RKO84124.1 - 2.8e-161 536.6 2.7 2.8e-161 536.6 2.7 1.3 2 0 0 2 2 2 1 TIP49 P-loop domain TIP49_C PF17856.1 RKO84124.1 - 4e-28 97.3 1.3 1.1e-27 96.0 1.3 1.8 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA PF00004.29 RKO84124.1 - 2.5e-09 37.6 1.5 1.4e-05 25.5 0.2 3.0 2 2 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 RKO84124.1 - 2.2e-08 34.0 0.6 0.0009 19.0 0.1 2.7 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain DnaB_C PF03796.15 RKO84124.1 - 4.3e-06 26.3 0.5 8.1e-06 25.3 0.5 1.4 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_5 PF07728.14 RKO84124.1 - 5.4e-06 26.5 0.2 0.0029 17.6 0.0 2.7 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 RKO84124.1 - 5.4e-05 22.7 1.2 0.0045 16.4 0.6 2.5 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_19 PF13245.6 RKO84124.1 - 5.9e-05 23.4 3.7 0.0037 17.6 3.7 2.8 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 RKO84124.1 - 0.00036 20.8 0.5 0.17 12.2 0.0 2.6 1 1 1 2 2 2 1 AAA domain AAA_16 PF13191.6 RKO84124.1 - 0.00066 20.1 0.1 0.0041 17.5 0.1 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 RKO84124.1 - 0.0015 18.1 0.2 0.0037 16.9 0.2 1.6 1 0 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 RKO84124.1 - 0.0018 18.0 0.5 2 8.1 0.1 3.0 3 0 0 3 3 3 2 Sigma-54 interaction domain AAA_33 PF13671.6 RKO84124.1 - 0.008 16.3 0.0 0.015 15.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 RKO84124.1 - 0.016 14.5 0.3 0.039 13.2 0.3 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_14 PF13173.6 RKO84124.1 - 0.024 14.7 0.1 1.3 9.0 0.0 3.0 3 1 0 3 3 3 0 AAA domain PIF1 PF05970.14 RKO84124.1 - 0.033 13.4 0.4 5.6 6.0 0.0 2.2 2 0 0 2 2 2 0 PIF1-like helicase ResIII PF04851.15 RKO84124.1 - 0.042 13.9 1.0 1.3 9.0 1.0 2.4 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_28 PF13521.6 RKO84124.1 - 0.042 14.1 0.1 0.11 12.7 0.1 1.8 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 RKO84124.1 - 0.049 14.0 1.7 0.11 12.9 0.5 2.3 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 RKO84124.1 - 0.071 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_7 PF12775.7 RKO84124.1 - 0.071 12.6 0.1 0.39 10.2 0.0 2.1 2 0 0 2 2 2 0 P-loop containing dynein motor region DUF2075 PF09848.9 RKO84124.1 - 0.094 11.9 0.1 0.14 11.3 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) TsaE PF02367.17 RKO84124.1 - 0.1 12.6 1.0 0.23 11.5 0.3 1.9 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 RKO84124.1 - 0.34 10.6 4.6 3 7.5 2.9 2.4 2 1 0 2 2 2 0 AAA domain AAA_11 PF13086.6 RKO84124.1 - 0.6 9.8 2.7 0.81 9.4 0.6 2.3 2 1 0 2 2 2 0 AAA domain Oxysterol_BP PF01237.18 RKO84127.1 - 8.9e-58 195.9 0.0 1e-57 195.7 0.0 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein Sortilin-Vps10 PF15902.5 RKO84129.1 - 5.1e-09 35.4 4.5 8.4e-05 21.5 0.5 3.1 1 1 2 3 3 3 3 Sortilin, neurotensin receptor 3, BNR_6 PF15899.5 RKO84129.1 - 0.004 17.1 2.5 0.92 9.7 0.0 5.1 5 0 0 5 5 5 1 BNR-Asp box repeat BNR PF02012.20 RKO84129.1 - 8.9 6.8 25.5 1.5 9.1 0.5 8.5 8 0 0 8 8 8 0 BNR/Asp-box repeat AAA PF00004.29 RKO84130.1 - 9e-13 48.8 0.1 1.5e-12 48.1 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 RKO84130.1 - 0.00074 19.3 0.0 0.0014 18.4 0.0 1.3 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 RKO84130.1 - 0.0013 18.0 0.0 0.0019 17.5 0.0 1.1 1 0 0 1 1 1 1 TIP49 P-loop domain Mg_chelatase PF01078.21 RKO84130.1 - 0.0039 16.6 0.1 0.0087 15.5 0.1 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 RKO84130.1 - 0.0042 17.1 0.1 0.01 15.9 0.1 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.17 RKO84130.1 - 0.0072 16.1 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_16 PF13191.6 RKO84130.1 - 0.0087 16.4 0.0 0.021 15.2 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 RKO84130.1 - 0.0088 16.2 1.7 0.0098 16.1 0.1 1.9 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 RKO84130.1 - 0.018 15.3 0.2 0.034 14.4 0.2 1.5 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 RKO84130.1 - 0.022 15.3 0.1 0.045 14.3 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 RKO84130.1 - 0.03 14.6 0.3 0.058 13.6 0.3 1.5 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 RKO84130.1 - 0.036 13.5 0.1 0.059 12.8 0.1 1.3 1 0 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 RKO84130.1 - 0.058 12.9 0.0 0.096 12.2 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_3 PF07726.11 RKO84130.1 - 0.071 13.0 0.0 0.19 11.6 0.0 1.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.9 RKO84130.1 - 0.095 11.9 0.1 0.15 11.3 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) TPR_1 PF00515.28 RKO84130.1 - 0.096 12.5 0.0 0.24 11.3 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat RNA_helicase PF00910.22 RKO84130.1 - 0.1 13.0 0.0 0.25 11.7 0.0 1.7 1 0 0 1 1 1 0 RNA helicase NTPase_1 PF03266.15 RKO84130.1 - 0.11 12.3 0.2 0.24 11.3 0.2 1.5 1 0 0 1 1 1 0 NTPase TsaE PF02367.17 RKO84130.1 - 0.14 12.1 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase PF06745.13 RKO84130.1 - 0.16 11.3 0.0 0.27 10.5 0.0 1.3 1 0 0 1 1 1 0 KaiC Sigma54_activat PF00158.26 RKO84130.1 - 0.2 11.4 0.0 0.35 10.6 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain Peptidase_M16_M PF16187.5 RKO84131.1 - 3.4e-78 262.7 0.0 3.1e-77 259.6 0.0 1.9 1 1 0 1 1 1 1 Middle or third domain of peptidase_M16 Peptidase_M16_C PF05193.21 RKO84131.1 - 2.4e-13 50.5 0.0 4.4e-13 49.7 0.0 1.5 1 0 0 1 1 1 1 Peptidase M16 inactive domain VP9 PF09625.10 RKO84131.1 - 0.11 12.6 0.2 4 7.7 0.1 2.3 2 0 0 2 2 2 0 VP9 protein Cellulase PF00150.18 RKO84131.1 - 0.16 11.4 0.0 0.24 10.8 0.0 1.2 1 0 0 1 1 1 0 Cellulase (glycosyl hydrolase family 5) LRR_4 PF12799.7 RKO84132.1 - 9.2e-34 114.9 20.6 1.6e-08 34.7 0.0 5.1 2 1 5 7 7 7 7 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 RKO84132.1 - 6.5e-20 71.3 9.4 1.4e-10 40.9 2.4 2.6 1 1 2 3 3 3 3 Leucine-rich repeat LRR_8 PF13855.6 RKO84132.1 - 5e-15 55.0 15.8 6.6e-06 25.8 1.3 4.5 2 1 1 4 4 4 4 Leucine rich repeat LRR_6 PF13516.6 RKO84132.1 - 1.4e-06 27.9 4.7 2.3 8.5 0.0 5.7 4 1 1 5 5 5 3 Leucine Rich repeat LRR_1 PF00560.33 RKO84132.1 - 6e-05 23.1 10.1 3.2 8.6 0.0 6.9 7 1 0 7 7 7 2 Leucine Rich Repeat HAS-barrel PF09378.10 RKO84132.1 - 0.18 11.9 0.3 13 6.0 0.0 2.7 1 1 1 2 2 2 0 HAS barrel domain Abhydrolase_3 PF07859.13 RKO84133.1 - 2.8e-30 105.8 0.3 4.3e-30 105.1 0.3 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 RKO84133.1 - 1e-11 44.3 0.0 1.5e-11 43.8 0.0 1.3 1 1 0 1 1 1 1 Steryl acetyl hydrolase Peptidase_S9 PF00326.21 RKO84133.1 - 0.033 13.7 0.0 0.72 9.3 0.0 2.1 1 1 0 1 1 1 0 Prolyl oligopeptidase family YqeY PF09424.10 RKO84135.1 - 1e-24 87.2 2.9 1.4e-24 86.8 2.9 1.3 1 0 0 1 1 1 1 Yqey-like protein F5_F8_type_C PF00754.25 RKO84136.1 - 3.3e-05 24.0 1.6 8.2e-05 22.7 1.6 1.7 1 0 0 1 1 1 1 F5/8 type C domain DUF321 PF03778.13 RKO84136.1 - 0.11 12.1 1.2 8.2 6.2 0.2 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF321) VCBS PF13517.6 RKO84136.1 - 6.1 7.5 9.3 26 5.5 0.5 3.9 3 0 0 3 3 3 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella DUF2855 PF11017.8 RKO84137.1 - 1.3e-70 238.8 0.0 1.5e-70 238.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2855) AAA_2 PF07724.14 RKO84139.1 - 2.1e-34 119.1 0.0 3.2e-34 118.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA PF00004.29 RKO84139.1 - 8.2e-15 55.4 0.0 1.3e-14 54.8 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 RKO84139.1 - 4.2e-07 29.6 0.8 0.002 17.5 0.1 2.6 2 1 1 3 3 3 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 RKO84139.1 - 1.5e-05 24.8 0.1 0.0097 15.6 0.0 2.4 1 1 1 2 2 2 2 Sigma-54 interaction domain AAA_5 PF07728.14 RKO84139.1 - 2e-05 24.6 0.4 0.00018 21.5 0.4 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 RKO84139.1 - 0.00015 21.5 0.0 0.00037 20.3 0.0 1.7 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain MCM PF00493.23 RKO84139.1 - 0.00073 18.7 0.0 0.0013 17.8 0.0 1.4 1 0 0 1 1 1 1 MCM P-loop domain Sigma54_activ_2 PF14532.6 RKO84139.1 - 0.0016 18.5 0.0 0.0042 17.2 0.0 1.6 2 0 0 2 2 1 1 Sigma-54 interaction domain AAA_22 PF13401.6 RKO84139.1 - 0.0021 18.4 0.2 0.013 15.8 0.1 2.1 1 1 1 2 2 2 1 AAA domain AAA_7 PF12775.7 RKO84139.1 - 0.0023 17.5 0.1 0.005 16.4 0.0 1.5 2 0 0 2 2 2 1 P-loop containing dynein motor region T2SSE PF00437.20 RKO84139.1 - 0.0023 17.0 0.0 0.0035 16.5 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_25 PF13481.6 RKO84139.1 - 0.0047 16.5 0.1 0.014 15.0 0.0 1.7 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 RKO84139.1 - 0.0097 15.7 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein NACHT PF05729.12 RKO84139.1 - 0.018 15.0 0.0 3.4 7.6 0.0 2.3 1 1 1 2 2 2 0 NACHT domain AAA_16 PF13191.6 RKO84139.1 - 0.02 15.3 0.1 0.053 13.9 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain PhoH PF02562.16 RKO84139.1 - 0.022 14.2 0.0 0.036 13.5 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein DEAD PF00270.29 RKO84139.1 - 0.036 13.8 0.0 0.074 12.8 0.0 1.4 1 0 0 1 1 1 0 DEAD/DEAH box helicase TsaE PF02367.17 RKO84139.1 - 0.051 13.6 0.0 0.08 12.9 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 RKO84139.1 - 0.055 14.0 0.0 0.09 13.3 0.0 1.3 1 0 0 1 1 1 0 ABC transporter AAA_29 PF13555.6 RKO84139.1 - 0.06 13.1 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.6 RKO84139.1 - 0.079 13.0 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain ResIII PF04851.15 RKO84139.1 - 0.088 12.8 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_24 PF13479.6 RKO84139.1 - 0.1 12.3 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_8 PF12780.7 RKO84139.1 - 0.14 11.4 0.0 0.2 11.0 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region D4 TRAPPC-Trs85 PF12739.7 RKO84142.1 - 4.8e-36 124.6 0.0 6.6e-36 124.2 0.0 1.2 1 0 0 1 1 1 1 ER-Golgi trafficking TRAPP I complex 85 kDa subunit Ribosomal_L27A PF00828.19 RKO84146.1 - 5.4e-25 88.5 0.1 1.2e-24 87.4 0.1 1.5 2 0 0 2 2 2 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A COesterase PF00135.28 RKO84147.1 - 0.001 18.1 0.0 0.0016 17.4 0.0 1.2 1 0 0 1 1 1 1 Carboxylesterase family SSP160 PF06933.11 RKO84147.1 - 0.018 13.3 14.5 0.024 12.9 14.5 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 Sporozoite_P67 PF05642.11 RKO84147.1 - 5.4 5.0 9.3 7.8 4.4 9.3 1.2 1 0 0 1 1 1 0 Sporozoite P67 surface antigen MGC-24 PF05283.11 RKO84147.1 - 7.3 7.0 13.5 1 9.8 7.9 2.1 2 0 0 2 2 2 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Clr2_transil PF16761.5 RKO84150.1 - 1.3e-14 54.7 0.1 2.3e-14 54.0 0.1 1.4 1 0 0 1 1 1 1 Transcription-silencing protein, cryptic loci regulator Clr2 Menin PF05053.13 RKO84150.1 - 0.19 10.1 0.2 0.24 9.7 0.2 1.0 1 0 0 1 1 1 0 Menin RAP1 PF07218.11 RKO84150.1 - 0.47 8.7 2.1 0.62 8.3 2.1 1.0 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) Herpes_capsid PF06112.11 RKO84150.1 - 1 9.4 8.0 1.7 8.7 8.0 1.3 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein AF-4 PF05110.13 RKO84150.1 - 5.5 4.9 17.2 7.1 4.6 17.2 1.1 1 0 0 1 1 1 0 AF-4 proto-oncoprotein DEC-1_N PF04625.13 RKO84151.1 - 0.14 11.1 2.6 0.21 10.6 2.6 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region CENP-B_dimeris PF09026.10 RKO84151.1 - 0.67 10.4 3.5 0.99 9.8 2.1 1.9 2 0 0 2 2 2 0 Centromere protein B dimerisation domain Ferric_reduct PF01794.19 RKO84152.1 - 6.1e-14 52.2 6.3 1.1e-13 51.5 6.3 1.3 1 0 0 1 1 1 1 Ferric reductase like transmembrane component HU-CCDC81_euk_2 PF18289.1 RKO84153.1 - 1e-14 54.4 0.1 2.2e-14 53.4 0.1 1.5 1 0 0 1 1 1 1 CCDC81 eukaryotic HU domain 2 SR-25 PF10500.9 RKO84154.1 - 2.1 7.9 10.2 4.8 6.7 10.2 1.5 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein HEAT_2 PF13646.6 RKO84155.1 - 1.6e-08 34.8 0.6 0.00037 20.8 0.0 3.6 3 1 0 3 3 3 2 HEAT repeats HEAT PF02985.22 RKO84155.1 - 5.6e-08 32.4 4.1 0.16 12.3 0.1 6.2 7 0 0 7 7 7 3 HEAT repeat CLASP_N PF12348.8 RKO84155.1 - 1.2e-06 28.3 0.1 1.9e-06 27.6 0.1 1.2 1 0 0 1 1 1 1 CLASP N terminal Cnd1 PF12717.7 RKO84155.1 - 0.00012 22.1 0.1 0.8 9.7 0.1 3.0 2 1 1 3 3 3 3 non-SMC mitotic condensation complex subunit 1 Dopey_N PF04118.14 RKO84155.1 - 0.001 18.3 0.0 0.0016 17.6 0.0 1.2 1 0 0 1 1 1 1 Dopey, N-terminal Aminotran_5 PF00266.19 RKO84156.1 - 9.1e-45 153.2 0.0 1e-44 153.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V B12-binding PF02310.19 RKO84156.1 - 0.0056 16.7 0.0 1.6 8.8 0.0 2.2 2 0 0 2 2 2 2 B12 binding domain DUF3369 PF11849.8 RKO84156.1 - 0.059 13.6 0.0 0.079 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3369) zf_CCCH_5 PF18384.1 RKO84158.1 - 0.21 11.8 2.2 0.58 10.3 0.3 2.7 3 0 0 3 3 3 0 Unkempt Zinc finger domain 1 (Znf1) PPR_2 PF13041.6 RKO84159.1 - 4.2e-18 65.3 0.0 4.9e-07 29.8 0.0 5.5 2 2 4 6 6 6 5 PPR repeat family PPR_3 PF13812.6 RKO84159.1 - 1.8e-10 40.7 0.0 0.0018 18.3 0.0 3.9 3 1 1 4 4 4 3 Pentatricopeptide repeat domain PPR PF01535.20 RKO84159.1 - 1e-06 28.6 0.0 3.2 8.2 0.0 5.1 6 0 0 6 6 6 2 PPR repeat PPR_long PF17177.4 RKO84159.1 - 2.6e-06 27.0 0.9 0.016 14.5 0.0 2.5 2 0 0 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 RKO84159.1 - 0.0003 20.4 0.0 0.42 10.3 0.0 4.4 6 0 0 6 6 6 1 PPR repeat DUF3808 PF10300.9 RKO84160.1 - 4.2e-06 25.8 0.0 7.3e-06 25.0 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF3808) Tim17 PF02466.19 RKO84161.1 - 8.3e-16 58.3 5.0 1.2e-15 57.9 5.0 1.2 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Pico_P2B PF01552.17 RKO84161.1 - 0.15 12.3 0.0 0.25 11.5 0.0 1.5 1 1 0 1 1 1 0 Picornavirus 2B protein EXS PF03124.14 RKO84163.1 - 2e-05 24.1 0.0 2.6e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 EXS family PAP2_C PF14360.6 RKO84163.1 - 0.045 14.3 0.3 0.095 13.3 0.3 1.5 1 0 0 1 1 1 0 PAP2 superfamily C-terminal D123 PF07065.14 RKO84164.1 - 1.3e-64 218.3 0.0 1.5e-64 218.1 0.0 1.1 1 0 0 1 1 1 1 D123 DUF1618 PF07762.14 RKO84165.1 - 0.12 13.0 0.3 0.43 11.2 0.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1618) MSP1_C PF07462.11 RKO84166.1 - 0.53 8.9 1.0 0.53 8.9 1.0 1.0 1 0 0 1 1 1 0 Merozoite surface protein 1 (MSP1) C-terminus AAA_7 PF12775.7 RKO84168.1 - 0.23 11.0 0.0 0.32 10.5 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region ABC_tran PF00005.27 RKO84169.1 - 3.4e-22 79.4 0.0 5.6e-22 78.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 RKO84169.1 - 3.2e-09 37.0 0.0 0.00041 20.2 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system YccF PF03733.13 RKO84169.1 - 0.0003 21.4 5.3 0.0003 21.4 5.3 3.4 3 0 0 3 3 3 2 Inner membrane component domain AAA_15 PF13175.6 RKO84169.1 - 0.0014 18.4 0.0 0.28 10.9 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 RKO84169.1 - 0.0053 16.2 0.0 0.39 10.1 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 RKO84169.1 - 0.11 13.0 0.1 0.19 12.2 0.1 1.3 1 0 0 1 1 1 0 AAA domain PIP5K PF01504.18 RKO84172.1 - 3.1e-57 193.9 0.0 4.9e-57 193.2 0.0 1.3 1 0 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase MMtag PF10159.9 RKO84173.1 - 0.00014 22.1 0.1 0.00014 22.1 0.1 3.1 2 0 0 2 2 2 1 Multiple myeloma tumor-associated F-box PF00646.33 RKO84174.1 - 0.0038 17.1 1.1 0.014 15.3 1.1 2.0 1 0 0 1 1 1 1 F-box domain F-box-like PF12937.7 RKO84174.1 - 0.0041 17.0 4.5 0.0041 17.0 4.5 2.2 2 0 0 2 2 2 1 F-box-like ASFV_L11L PF05293.11 RKO84175.1 - 0.037 14.4 0.6 0.2 12.0 0.2 2.3 1 1 1 2 2 2 0 African swine fever virus (ASFV) L11L protein YidC_periplas PF14849.6 RKO84177.1 - 6.2e-07 29.6 0.2 2.5 7.9 0.0 6.1 4 1 2 7 7 7 2 YidC periplasmic domain DUF4969 PF16339.5 RKO84177.1 - 5e-05 23.6 8.8 3.4 8.1 0.1 6.1 6 0 0 6 6 6 2 Domain of unknown function (DUF4969) Hyaluronidase_1 PF07212.11 RKO84177.1 - 7.3e-05 22.2 0.8 2 7.6 0.0 4.7 4 1 1 5 5 5 2 Hyaluronidase protein (HylP) Y_Y_Y PF07495.13 RKO84177.1 - 0.029 14.3 0.0 30 4.6 0.0 4.3 4 0 0 4 4 4 0 Y_Y_Y domain DUF1863 PF08937.11 RKO84177.1 - 0.086 13.2 0.0 25 5.2 0.0 4.2 6 0 0 6 6 6 0 MTH538 TIR-like domain (DUF1863) PPC PF04151.15 RKO84177.1 - 0.35 12.0 3.2 30 5.8 0.1 4.0 3 1 0 3 3 3 0 Bacterial pre-peptidase C-terminal domain PilS PF08805.11 RKO84177.1 - 0.39 10.5 3.1 1.6 8.6 0.0 3.1 3 0 0 3 3 3 0 PilS N terminal ApbA PF02558.16 RKO84178.1 - 0.0035 17.0 0.1 0.12 12.0 0.0 2.2 2 0 0 2 2 2 2 Ketopantoate reductase PanE/ApbA YscO PF07321.12 RKO84182.1 - 0.24 11.4 1.4 0.35 10.8 1.4 1.1 1 0 0 1 1 1 0 Type III secretion protein YscO SOG2 PF10428.9 RKO84182.1 - 4 6.5 11.8 5.4 6.1 11.8 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein Cep57_CLD PF14073.6 RKO84183.1 - 0.16 12.0 0.0 0.26 11.3 0.0 1.3 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 LRR_4 PF12799.7 RKO84184.1 - 0.011 16.2 6.4 17 6.0 0.5 5.5 6 1 1 7 7 7 0 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO84184.1 - 0.12 12.1 2.5 0.73 9.6 0.5 3.2 3 1 0 3 3 3 0 Leucine rich repeat YIF1 PF03878.15 RKO84187.1 - 1.8e-62 211.0 0.1 2.5e-62 210.5 0.1 1.0 1 0 0 1 1 1 1 YIF1 Yip1 PF04893.17 RKO84187.1 - 0.0014 18.4 0.1 0.0019 17.9 0.1 1.2 1 0 0 1 1 1 1 Yip1 domain CW_binding_1 PF01473.20 RKO84187.1 - 0.11 12.9 0.3 0.24 11.8 0.3 1.6 1 0 0 1 1 1 0 Putative cell wall binding repeat LOH1CR12 PF10158.9 RKO84188.1 - 2.6e-11 43.6 0.0 4.1e-11 43.0 0.0 1.2 1 0 0 1 1 1 1 Tumour suppressor protein TGS PF02824.21 RKO84188.1 - 0.14 12.2 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 TGS domain Aldo_ket_red PF00248.21 RKO84189.1 - 0.01 15.0 0.0 0.016 14.4 0.0 1.2 1 0 0 1 1 1 0 Aldo/keto reductase family Acyl_transf_1 PF00698.21 RKO84190.1 - 9.5e-31 107.5 0.0 1.1e-30 107.2 0.0 1.1 1 0 0 1 1 1 1 Acyl transferase domain NBD94 PF16830.5 RKO84190.1 - 0.16 12.4 0.4 0.25 11.8 0.4 1.3 1 0 0 1 1 1 0 Nucleotide-Binding Domain 94 of RH Fas_alpha_ACP PF18325.1 RKO84191.1 - 3.8e-62 209.4 0.0 5.4e-62 208.9 0.0 1.2 1 0 0 1 1 1 1 Fatty acid synthase subunit alpha Acyl carrier domain FAS_I_H PF18314.1 RKO84191.1 - 8.6e-27 94.1 0.2 1.4e-26 93.4 0.2 1.3 1 0 0 1 1 1 1 Fatty acid synthase type I helical domain D5_N PF08706.11 RKO84192.1 - 4e-05 23.9 0.1 0.00016 21.9 0.0 2.0 2 0 0 2 2 2 1 D5 N terminal like UDG PF03167.19 RKO84193.1 - 1e-09 38.6 0.0 1.2e-09 38.3 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily DDE_Tnp_1_assoc PF13808.6 RKO84193.1 - 0.047 13.7 0.0 31 4.7 0.0 3.1 3 0 0 3 3 3 0 DDE_Tnp_1-associated Glyco_hydro_26 PF02156.15 RKO84194.1 - 0.044 13.2 2.8 0.9 8.9 0.1 2.0 2 0 0 2 2 2 0 Glycosyl hydrolase family 26 EF-hand_5 PF13202.6 RKO84194.1 - 0.092 12.3 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 EF hand Phage_term_smal PF05944.12 RKO84199.1 - 0.1 12.5 1.1 6.8 6.7 0.1 2.8 1 1 2 3 3 3 0 Phage small terminase subunit Dpy-30 PF05186.13 RKO84200.1 - 0.15 11.7 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 Dpy-30 motif zf-C6H2 PF15801.5 RKO84200.1 - 0.18 12.2 0.1 0.33 11.3 0.1 1.3 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding ATG27 PF09451.10 RKO84200.1 - 0.22 11.4 0.8 0.33 10.8 0.8 1.2 1 0 0 1 1 1 0 Autophagy-related protein 27 E1-E2_ATPase PF00122.20 RKO84201.1 - 2.5e-11 43.4 3.9 5.2e-11 42.4 3.9 1.5 1 1 0 1 1 1 1 E1-E2 ATPase Cation_ATPase PF13246.6 RKO84201.1 - 2.9e-07 30.5 0.0 6.4e-07 29.4 0.0 1.6 1 1 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase PF00702.26 RKO84201.1 - 0.0011 19.3 0.0 0.0071 16.6 0.0 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Coilin_N PF15862.5 RKO84202.1 - 0.0016 18.3 0.0 0.0016 18.3 0.0 2.7 2 1 0 2 2 2 1 Coilin N-terminus Presenilin PF01080.17 RKO84202.1 - 0.41 9.4 37.3 1 8.1 7.4 2.2 2 0 0 2 2 2 0 Presenilin SpoIIP PF07454.11 RKO84202.1 - 0.74 9.2 26.5 2.4 7.6 13.2 2.3 2 0 0 2 2 2 0 Stage II sporulation protein P (SpoIIP) RR_TM4-6 PF06459.12 RKO84202.1 - 3.1 7.5 29.7 2.2 8.0 16.4 2.2 2 0 0 2 2 2 0 Ryanodine Receptor TM 4-6 PAT1 PF09770.9 RKO84202.1 - 4.6 5.4 69.4 0.71 8.1 36.5 2.2 2 0 0 2 2 2 0 Topoisomerase II-associated protein PAT1 CPSF100_C PF13299.6 RKO84202.1 - 7.9 6.6 21.1 4.8 7.3 10.4 2.5 2 0 0 2 2 2 0 Cleavage and polyadenylation factor 2 C-terminal SPOC PF07744.13 RKO84203.1 - 1.6e-08 34.6 0.0 2.2e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 SPOC domain Methyltransf_11 PF08241.12 RKO84204.1 - 7.5e-16 58.6 0.0 2e-15 57.2 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 RKO84204.1 - 3.1e-13 50.3 0.0 7.9e-13 48.9 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO84204.1 - 5.4e-10 39.3 0.0 7.2e-10 38.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 RKO84204.1 - 4.2e-07 30.0 0.0 8.6e-07 28.9 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 RKO84204.1 - 1.6e-06 28.8 0.0 2.7e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 RKO84204.1 - 0.00029 20.5 0.0 0.00043 19.9 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_8 PF05148.15 RKO84204.1 - 0.00067 19.6 0.0 0.001 19.0 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase Ubie_methyltran PF01209.18 RKO84204.1 - 0.0063 15.9 0.0 0.01 15.2 0.0 1.4 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_29 PF03141.16 RKO84204.1 - 0.034 12.7 0.0 0.044 12.3 0.0 1.2 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase peroxidase PF00141.23 RKO84205.1 - 8.8e-12 45.2 0.0 9.6e-12 45.1 0.0 1.1 1 0 0 1 1 1 1 Peroxidase GST_N PF02798.20 RKO84206.1 - 6.9e-14 52.0 0.1 2.6e-13 50.1 0.0 2.0 3 0 0 3 3 3 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 RKO84206.1 - 5.5e-12 45.9 0.0 1.1e-11 45.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 RKO84206.1 - 4.6e-09 36.5 0.0 7.8e-09 35.7 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_4 PF17172.4 RKO84206.1 - 0.15 12.8 0.0 0.28 12.0 0.0 1.6 1 1 0 1 1 1 0 Glutathione S-transferase N-terminal domain MGC-24 PF05283.11 RKO84208.1 - 0.0079 16.6 0.4 0.02 15.4 0.4 1.6 1 0 0 1 1 1 1 Multi-glycosylated core protein 24 (MGC-24), sialomucin DEAD PF00270.29 RKO84209.1 - 3.8e-38 131.0 0.0 5.1e-37 127.3 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO84209.1 - 3.6e-28 98.1 0.0 2.4e-26 92.3 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Patatin PF01734.22 RKO84210.1 - 0.0029 17.8 0.0 0.0052 17.0 0.0 1.4 1 0 0 1 1 1 1 Patatin-like phospholipase Cadherin_C PF01049.17 RKO84210.1 - 0.14 12.5 0.0 0.26 11.6 0.0 1.4 1 1 0 1 1 1 0 Cadherin cytoplasmic region Flocculin_t3 PF13928.6 RKO84211.1 - 0.086 13.4 20.0 0.92 10.1 0.2 2.2 2 0 0 2 2 2 0 Flocculin type 3 repeat Sugarporin_N PF11471.8 RKO84211.1 - 0.18 11.8 3.0 0.15 12.0 1.5 1.7 1 1 1 2 2 2 0 Maltoporin periplasmic N-terminal extension Abhydrolase_6 PF12697.7 RKO84212.1 - 3.7e-08 34.2 0.0 6.2e-08 33.5 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 RKO84212.1 - 1.1e-07 32.2 0.0 1.8e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 Thioesterase domain Hydrolase_4 PF12146.8 RKO84212.1 - 1.2e-06 28.0 0.0 4.3e-06 26.2 0.0 2.0 2 1 1 3 3 3 1 Serine aminopeptidase, S33 PGAP1 PF07819.13 RKO84212.1 - 0.00065 19.5 0.0 0.0013 18.5 0.0 1.5 1 0 0 1 1 1 1 PGAP1-like protein Abhydrolase_1 PF00561.20 RKO84212.1 - 0.0024 17.6 0.2 0.017 14.8 0.2 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold DUF2974 PF11187.8 RKO84212.1 - 0.0045 16.6 0.0 0.0062 16.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2974) Acyl_transf_1 PF00698.21 RKO84212.1 - 0.0057 16.2 0.6 0.0088 15.6 0.6 1.2 1 0 0 1 1 1 1 Acyl transferase domain Lipase_3 PF01764.25 RKO84212.1 - 0.016 15.1 0.0 0.046 13.6 0.0 1.8 2 0 0 2 2 2 0 Lipase (class 3) DUF3089 PF11288.8 RKO84212.1 - 0.018 14.6 0.0 0.032 13.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) LCAT PF02450.15 RKO84212.1 - 0.028 13.6 0.0 0.048 12.8 0.0 1.3 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase DUF915 PF06028.11 RKO84212.1 - 0.039 13.3 0.0 1.9 7.8 0.0 2.2 1 1 1 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) DUF726 PF05277.12 RKO84212.1 - 0.064 12.2 0.0 0.11 11.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF726) Abhydrolase_8 PF06259.12 RKO84212.1 - 0.11 12.2 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase DUF900 PF05990.12 RKO84212.1 - 0.11 12.0 0.0 0.34 10.4 0.0 1.8 1 1 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) RRM_3 PF08777.11 RKO84213.1 - 7.5e-11 42.0 0.0 1.2e-09 38.1 0.0 2.2 2 0 0 2 2 2 1 RNA binding motif RRM_1 PF00076.22 RKO84213.1 - 1.2e-06 28.2 0.1 0.0016 18.2 0.1 2.6 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) La PF05383.17 RKO84213.1 - 0.23 11.5 0.0 0.43 10.7 0.0 1.4 1 0 0 1 1 1 0 La domain PRP38_assoc PF12871.7 RKO84213.1 - 0.44 11.2 10.4 1 10.0 10.4 1.6 1 1 0 1 1 1 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term MULE PF10551.9 RKO84214.1 - 0.13 12.6 0.1 0.32 11.4 0.1 1.6 1 0 0 1 1 1 0 MULE transposase domain DUF5609 PF18429.1 RKO84214.1 - 0.16 11.7 0.0 0.45 10.3 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF5609) PIN_4 PF13638.6 RKO84215.1 - 1.1e-16 61.3 0.2 3e-16 59.9 0.2 1.7 1 1 0 1 1 1 1 PIN domain Cor1 PF04803.12 RKO84215.1 - 0.18 12.0 0.4 0.31 11.3 0.4 1.3 1 0 0 1 1 1 0 Cor1/Xlr/Xmr conserved region PIN_12 PF16289.5 RKO84215.1 - 0.21 12.1 0.0 0.33 11.4 0.0 1.3 1 0 0 1 1 1 0 PIN domain Mannosyl_trans3 PF11051.8 RKO84217.1 - 1.6e-12 47.4 0.0 3.6e-12 46.2 0.0 1.5 1 1 0 1 1 1 1 Mannosyltransferase putative SlyX PF04102.12 RKO84218.1 - 0.008 16.8 0.0 0.026 15.1 0.0 1.9 1 0 0 1 1 1 1 SlyX IFT57 PF10498.9 RKO84218.1 - 0.057 12.4 0.1 0.08 11.9 0.1 1.1 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Img2 PF05046.14 RKO84218.1 - 0.12 12.7 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) FAM76 PF16046.5 RKO84218.1 - 0.27 10.5 0.0 0.27 10.5 0.0 1.8 2 0 0 2 2 2 0 FAM76 protein C1_1 PF00130.22 RKO84219.1 - 0.52 10.2 6.2 0.92 9.4 0.1 2.9 3 0 0 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Pox_VLTF3 PF04947.14 RKO84220.1 - 5.3e-05 23.0 2.1 0.00022 21.0 2.1 1.8 1 1 0 1 1 1 1 Poxvirus Late Transcription Factor VLTF3 like Myosin_head PF00063.21 RKO84221.1 - 1.4e-93 314.4 3.8 1.9e-93 314.0 3.8 1.1 1 0 0 1 1 1 1 Myosin head (motor domain) Myosin_TH1 PF06017.13 RKO84221.1 - 3e-06 27.0 0.1 6.4e-06 26.0 0.1 1.6 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding IQ PF00612.27 RKO84221.1 - 0.00079 19.0 2.5 0.0018 17.9 2.5 1.6 1 0 0 1 1 1 1 IQ calmodulin-binding motif DLP_helical PF18709.1 RKO84221.1 - 0.029 13.6 0.2 0.053 12.7 0.0 1.6 2 0 0 2 2 2 0 Dynamin-like helical domain TPR_1 PF00515.28 RKO84222.1 - 8.4e-10 38.1 0.9 4.7e-05 23.0 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 RKO84222.1 - 5.6e-07 29.2 0.5 0.086 13.0 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 RKO84222.1 - 0.00024 20.9 0.1 0.0075 16.2 0.0 2.7 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 RKO84222.1 - 0.00034 20.9 0.2 0.58 10.5 0.0 3.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO84222.1 - 0.0042 17.6 0.1 5.3 7.9 0.0 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_20 PF14561.6 RKO84222.1 - 0.0058 16.9 3.2 0.028 14.7 0.0 2.2 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 RKO84222.1 - 0.0089 15.9 1.7 0.12 12.3 0.0 2.9 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_8 PF13181.6 RKO84222.1 - 0.011 15.9 2.1 0.18 12.1 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO84222.1 - 0.063 14.1 0.0 1.6 9.8 0.0 2.7 3 0 0 3 3 2 0 Tetratricopeptide repeat LUC7 PF03194.15 RKO84222.1 - 0.079 12.6 0.5 0.1 12.3 0.5 1.1 1 0 0 1 1 1 0 LUC7 N_terminus Poxvirus PF06227.12 RKO84222.1 - 0.095 12.5 0.1 0.12 12.2 0.1 1.1 1 0 0 1 1 1 0 dsDNA Poxvirus ZapB PF06005.12 RKO84222.1 - 0.21 12.1 5.1 0.42 11.1 5.1 1.4 1 0 0 1 1 1 0 Cell division protein ZapB SAP PF02037.27 RKO84223.1 - 4.1e-05 23.2 1.3 4.1e-05 23.2 1.3 2.0 2 0 0 2 2 2 1 SAP domain zf-C4H2 PF10146.9 RKO84223.1 - 0.00013 22.4 0.3 0.0002 21.8 0.3 1.3 1 0 0 1 1 1 1 Zinc finger-containing protein Tropomyosin_1 PF12718.7 RKO84223.1 - 0.015 15.5 5.9 1.5 8.9 0.1 2.4 2 1 0 2 2 2 0 Tropomyosin like CTNNBL PF08216.11 RKO84223.1 - 0.029 14.5 2.2 0.16 12.2 0.8 2.1 1 1 1 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear CorA PF01544.18 RKO84223.1 - 0.052 12.9 7.6 0.1 11.9 6.0 1.8 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein Synaptobrevin PF00957.21 RKO84223.1 - 0.2 11.5 0.3 0.54 10.1 0.3 1.7 1 0 0 1 1 1 0 Synaptobrevin SlyX PF04102.12 RKO84223.1 - 0.22 12.1 0.4 0.22 12.1 0.4 3.4 2 1 1 3 3 3 0 SlyX Cnn_1N PF07989.11 RKO84223.1 - 0.37 11.0 5.3 0.53 10.5 0.1 2.5 2 0 0 2 2 2 0 Centrosomin N-terminal motif 1 Ax_dynein_light PF10211.9 RKO84223.1 - 0.43 10.5 10.1 0.21 11.5 5.1 2.1 2 0 0 2 2 2 0 Axonemal dynein light chain SPATA24 PF15175.6 RKO84223.1 - 0.46 10.4 6.7 3.1 7.7 5.8 2.1 1 1 1 2 2 2 0 Spermatogenesis-associated protein 24 FlaC_arch PF05377.11 RKO84223.1 - 0.52 10.7 3.0 4.6 7.7 0.4 2.5 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) YabA PF06156.13 RKO84223.1 - 0.85 10.3 7.3 3.2 8.4 1.0 2.3 1 1 1 2 2 2 0 Initiation control protein YabA TPR_MLP1_2 PF07926.12 RKO84223.1 - 1.1 9.3 10.7 12 6.0 0.1 2.5 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein KASH_CCD PF14662.6 RKO84223.1 - 1.3 8.8 10.6 1.4 8.8 4.5 2.0 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH Prefoldin_2 PF01920.20 RKO84223.1 - 1.9 8.5 6.2 9.2 6.3 0.7 2.4 2 0 0 2 2 2 0 Prefoldin subunit BST2 PF16716.5 RKO84223.1 - 2.3 8.9 6.5 5.8 7.6 0.2 2.7 2 1 0 2 2 2 0 Bone marrow stromal antigen 2 Uso1_p115_C PF04871.13 RKO84223.1 - 2.9 8.3 8.6 6 7.3 3.5 2.5 2 1 0 3 3 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region CENP-H PF05837.12 RKO84223.1 - 4.7 7.7 7.4 30 5.1 3.0 2.3 2 0 0 2 2 2 0 Centromere protein H (CENP-H) TMF_DNA_bd PF12329.8 RKO84223.1 - 7.6 6.6 8.5 0.67 10.0 0.7 2.8 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding PseudoU_synth_1 PF01416.20 RKO84224.1 - 2.9e-13 50.2 0.0 1.2e-11 45.1 0.0 2.6 3 0 0 3 3 3 1 tRNA pseudouridine synthase PKI PF02827.16 RKO84225.1 - 0.027 14.7 0.0 0.069 13.4 0.0 1.6 1 0 0 1 1 1 0 cAMP-dependent protein kinase inhibitor Peptidase_M24 PF00557.24 RKO84226.1 - 6.2e-49 166.5 0.0 7.1e-49 166.3 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 AMP_N PF05195.16 RKO84227.1 - 9.1e-12 44.8 0.0 1.3e-11 44.3 0.0 1.1 1 0 0 1 1 1 1 Aminopeptidase P, N-terminal domain MqsA_antitoxin PF15731.5 RKO84227.1 - 0.2 11.8 0.0 0.35 11.0 0.0 1.4 1 1 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA Ank_2 PF12796.7 RKO84228.1 - 1.9e-19 70.0 0.2 0.00045 20.7 0.0 6.2 2 2 5 7 7 7 7 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO84228.1 - 1.1e-17 64.1 4.4 8.9e-05 23.0 0.0 8.1 5 2 4 9 9 9 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO84228.1 - 7.1e-16 58.1 8.8 0.011 16.0 0.0 9.0 5 3 6 11 11 11 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO84228.1 - 1.5e-07 31.1 2.9 1.6e+02 3.4 0.0 10.0 11 1 1 12 12 12 0 Ankyrin repeat DUF5049 PF16468.5 RKO84228.1 - 1.4e-05 24.9 0.3 40 4.2 0.0 7.0 5 2 3 8 8 8 0 Domain of unknown function (DUF5049) VHL_C PF17211.3 RKO84228.1 - 0.085 12.9 0.0 34 4.5 0.0 4.3 4 0 0 4 4 4 0 VHL box domain Kelch_5 PF13854.6 RKO84229.1 - 1.8e-09 37.3 4.8 0.017 15.1 0.0 4.5 4 0 0 4 4 4 3 Kelch motif Kelch_2 PF07646.15 RKO84229.1 - 4.4e-09 36.0 1.2 0.013 15.5 0.1 5.5 5 0 0 5 5 5 2 Kelch motif Kelch_6 PF13964.6 RKO84229.1 - 1.9e-08 34.3 6.2 0.027 14.8 0.1 5.3 4 1 1 5 5 5 2 Kelch motif Stevor PF17410.2 RKO84229.1 - 0.0027 17.3 0.1 0.0049 16.5 0.1 1.3 1 0 0 1 1 1 1 Subtelomeric Variable Open Reading frame Kelch_3 PF13415.6 RKO84229.1 - 0.0037 17.5 17.0 0.083 13.2 0.1 5.1 5 0 0 5 5 5 2 Galactose oxidase, central domain Kelch_4 PF13418.6 RKO84229.1 - 0.0037 17.2 19.2 0.033 14.2 0.2 5.8 5 1 1 6 6 6 2 Galactose oxidase, central domain SKG6 PF08693.10 RKO84229.1 - 0.0038 16.6 0.6 0.0038 16.6 0.6 2.3 2 0 0 2 2 2 1 Transmembrane alpha-helix domain Kelch_1 PF01344.25 RKO84229.1 - 0.0063 16.1 13.2 0.1 12.2 0.0 5.0 6 0 0 6 6 6 1 Kelch motif DUF2062 PF09835.9 RKO84229.1 - 0.053 13.4 0.0 1.2 9.0 0.0 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2062) Kei1 PF08552.11 RKO84229.1 - 0.059 13.2 0.3 0.23 11.3 0.0 1.9 2 0 0 2 2 2 0 Inositolphosphorylceramide synthase subunit Kei1 DUF2207 PF09972.9 RKO84229.1 - 0.12 11.1 0.0 0.2 10.4 0.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Amnionless PF14828.6 RKO84229.1 - 0.15 10.8 0.0 0.22 10.3 0.0 1.1 1 0 0 1 1 1 0 Amnionless Gemini_mov PF01708.16 RKO84229.1 - 0.32 10.8 1.0 1 9.1 0.2 2.2 2 0 0 2 2 2 0 Geminivirus putative movement protein Adeno_E3_CR2 PF02439.15 RKO84229.1 - 9.1 6.1 6.4 0.38 10.6 0.2 1.9 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 Methyltransf_2 PF00891.18 RKO84230.1 - 2.3e-09 36.9 0.0 3.8e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain GCFC PF07842.12 RKO84234.1 - 2.3e-06 27.4 0.0 3.2e-06 27.0 0.0 1.1 1 0 0 1 1 1 1 GC-rich sequence DNA-binding factor-like protein Sgf11 PF08209.11 RKO84235.1 - 7.7e-10 38.2 1.6 4.2e-09 35.8 0.1 2.2 2 0 0 2 2 2 1 Sgf11 (transcriptional regulation protein) zf-WRNIP1_ubi PF18279.1 RKO84235.1 - 0.0066 17.0 1.1 0.0076 16.8 0.0 1.7 2 0 0 2 2 2 1 Werner helicase-interacting protein 1 ubiquitin-binding domain zf-Di19 PF05605.12 RKO84235.1 - 0.012 15.9 0.1 0.76 10.1 0.1 2.2 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-Dof PF02701.15 RKO84235.1 - 0.16 12.2 2.6 0.39 10.9 0.4 2.2 2 0 0 2 2 2 0 Dof domain, zinc finger UQ_con PF00179.26 RKO84236.1 - 3.7e-22 78.5 0.0 4.1e-22 78.3 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UEV PF05743.13 RKO84236.1 - 0.011 15.6 0.0 0.016 15.0 0.0 1.2 1 1 0 1 1 1 0 UEV domain RRM_1 PF00076.22 RKO84239.1 - 4.9e-11 42.3 0.0 7.7e-11 41.7 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) UBX PF00789.20 RKO84239.1 - 0.12 12.6 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 UBX domain NMD3 PF04981.13 RKO84240.1 - 1.7e-83 279.8 2.1 2.4e-83 279.3 2.1 1.2 1 0 0 1 1 1 1 NMD3 family DUF1289 PF06945.13 RKO84240.1 - 0.91 9.4 6.1 12 5.8 0.1 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF1289) DZR PF12773.7 RKO84240.1 - 1.7 8.7 9.5 95 3.1 9.5 2.8 1 1 0 1 1 1 0 Double zinc ribbon 2-oxogl_dehyd_N PF16078.5 RKO84241.1 - 0.45 10.1 0.1 0.45 10.1 0.1 1.8 2 0 0 2 2 2 0 2-oxoglutarate dehydrogenase N-terminus Pkinase_Tyr PF07714.17 RKO84242.1 - 1.3e-18 67.2 0.0 1.5e-18 67.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 RKO84242.1 - 2.5e-16 59.8 0.0 2.7e-16 59.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 RKO84242.1 - 0.0077 15.6 0.0 0.0081 15.5 0.0 1.1 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 RKO84242.1 - 0.0081 16.1 0.0 0.0088 16.0 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 RKO84242.1 - 0.01 15.4 0.0 0.013 15.2 0.0 1.1 1 0 0 1 1 1 0 RIO1 family YrbL-PhoP_reg PF10707.9 RKO84242.1 - 0.05 13.1 0.0 0.065 12.8 0.0 1.1 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL Seadorna_VP7 PF07387.11 RKO84242.1 - 0.083 11.9 0.0 0.1 11.6 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 Kdo PF06293.14 RKO84242.1 - 0.12 11.7 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family LDB19 PF13002.7 RKO84243.1 - 0.00039 20.2 0.0 0.00065 19.4 0.0 1.3 1 0 0 1 1 1 1 Arrestin_N terminal like Arrestin_N PF00339.29 RKO84243.1 - 0.0025 17.9 1.1 0.028 14.5 0.0 2.4 2 1 1 3 3 3 1 Arrestin (or S-antigen), N-terminal domain Spt5_N PF11942.8 RKO84243.1 - 0.61 11.1 6.6 1.1 10.2 6.6 1.4 1 0 0 1 1 1 0 Spt5 transcription elongation factor, acidic N-terminal DUF4142 PF13628.6 RKO84244.1 - 0.011 16.0 2.1 0.02 15.2 2.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4142) FapA PF03961.13 RKO84244.1 - 0.098 11.2 4.4 0.14 10.7 4.4 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A Gal11_ABD1 PF18535.1 RKO84244.1 - 0.14 12.3 0.5 1.1 9.3 0.0 2.2 1 1 0 2 2 2 0 Gal11 activator-binding domain (ABD1) Fib_alpha PF08702.10 RKO84244.1 - 0.17 12.1 3.7 0.29 11.3 3.7 1.4 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Syntaxin-6_N PF09177.11 RKO84244.1 - 0.34 11.5 2.7 7.5 7.2 0.5 2.4 1 1 1 2 2 2 0 Syntaxin 6, N-terminal GAS PF13851.6 RKO84244.1 - 0.41 10.0 10.0 2 7.7 10.0 2.0 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding ADIP PF11559.8 RKO84244.1 - 6.1 6.9 10.7 3.9 7.5 6.4 3.0 2 1 0 2 2 2 0 Afadin- and alpha -actinin-Binding Cornifin PF02389.15 RKO84247.1 - 0.011 15.9 0.0 0.011 15.9 0.0 2.3 3 0 0 3 3 3 0 Cornifin (SPRR) family TRAM_LAG1_CLN8 PF03798.16 RKO84249.1 - 1.3e-40 139.2 15.4 1.5e-40 139.1 15.4 1.0 1 0 0 1 1 1 1 TLC domain AMP-binding_C PF13193.6 RKO84250.1 - 1.3e-15 58.1 2.7 1.7e-15 57.7 2.7 1.2 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 RKO84250.1 - 8.1e-06 24.7 0.0 1.1e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme HAP1_N PF04849.13 RKO84252.1 - 0.0014 17.9 13.9 0.0014 17.9 13.9 2.4 1 1 1 2 2 2 1 HAP1 N-terminal conserved region Fez1 PF06818.15 RKO84252.1 - 0.0078 16.7 26.9 0.0078 16.7 26.9 3.0 2 1 1 3 3 3 1 Fez1 AAA_13 PF13166.6 RKO84252.1 - 0.041 12.5 22.2 0.09 11.4 22.2 1.5 1 1 0 1 1 1 0 AAA domain Filament PF00038.21 RKO84252.1 - 0.094 12.3 33.4 0.064 12.8 11.1 2.7 2 1 1 3 3 3 0 Intermediate filament protein Tup_N PF08581.10 RKO84252.1 - 0.096 13.0 23.7 0.19 12.1 8.9 3.5 3 1 1 4 4 4 0 Tup N-terminal GAS PF13851.6 RKO84252.1 - 0.12 11.7 39.1 0.69 9.2 15.0 3.6 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding Rnk_N PF14760.6 RKO84252.1 - 0.18 12.3 7.6 1.3 9.6 0.7 3.2 2 0 0 2 2 2 0 Rnk N-terminus Atg14 PF10186.9 RKO84252.1 - 0.22 10.6 27.7 0.21 10.6 9.3 2.3 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 RKO84252.1 - 0.75 8.6 32.1 0.53 9.1 21.0 2.8 1 1 2 3 3 3 0 Spc7 kinetochore protein DinB PF05163.12 RKO84252.1 - 0.77 9.7 11.3 3.8 7.4 2.4 2.7 2 0 0 2 2 2 0 DinB family Spc24 PF08286.11 RKO84252.1 - 0.77 10.0 17.0 1.9 8.7 6.3 2.9 2 1 0 2 2 2 0 Spc24 subunit of Ndc80 ZapB PF06005.12 RKO84252.1 - 1.3 9.6 36.6 0.98 9.9 6.1 4.7 3 1 1 4 4 4 0 Cell division protein ZapB Laminin_II PF06009.12 RKO84252.1 - 1.5 8.8 14.3 0.05 13.6 3.1 2.5 2 1 1 3 3 3 0 Laminin Domain II Fungal_TACC PF12709.7 RKO84252.1 - 2.6 8.6 18.8 4.6 7.8 1.4 4.2 3 1 1 4 4 4 0 Fungal Transforming acidic coiled-coil (TACC) proteins Cauli_AT PF03233.13 RKO84252.1 - 5.8 6.8 9.8 11 5.9 2.0 2.3 2 0 0 2 2 2 0 Aphid transmission protein DUF3450 PF11932.8 RKO84252.1 - 6.4 6.0 27.4 1.1 8.5 4.4 3.3 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) ADIP PF11559.8 RKO84252.1 - 8.2 6.5 38.7 0.19 11.8 9.4 3.0 2 1 0 3 3 3 0 Afadin- and alpha -actinin-Binding Ribosomal_L21e PF01157.18 RKO84254.1 - 3.7e-45 151.9 3.7 3.7e-45 151.9 3.7 1.8 2 0 0 2 2 2 1 Ribosomal protein L21e Acyl-CoA_dh_1 PF00441.24 RKO84255.1 - 4.2e-46 156.9 1.8 6.2e-46 156.3 1.8 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 RKO84255.1 - 3.1e-23 82.6 0.0 8.2e-23 81.2 0.0 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 RKO84255.1 - 4.4e-23 81.3 0.0 7.4e-23 80.6 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 RKO84255.1 - 5e-23 81.8 0.1 8e-23 81.2 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain AgrD PF05931.11 RKO84255.1 - 0.045 13.8 0.0 0.14 12.2 0.0 1.7 1 0 0 1 1 1 0 Staphylococcal AgrD protein RhoGAP PF00620.27 RKO84257.1 - 1.5e-36 125.6 0.1 2.1e-36 125.0 0.1 1.2 1 0 0 1 1 1 1 RhoGAP domain DUF1048 PF06304.11 RKO84257.1 - 0.11 13.0 0.0 0.21 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1048) WD40 PF00400.32 RKO84258.1 - 2.1e-05 25.2 3.5 1.3 10.0 0.0 6.1 7 1 0 7 7 7 2 WD domain, G-beta repeat WD40 PF00400.32 RKO84259.1 - 2.4e-22 78.8 5.5 2.8e-05 24.8 0.1 4.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO84259.1 - 3.1e-09 37.0 0.2 5.3e-05 23.4 0.0 2.9 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 RKO84259.1 - 3.1e-06 26.7 1.4 0.0025 17.2 0.2 2.0 1 1 1 2 2 2 2 WD40-like domain PQQ PF01011.21 RKO84259.1 - 0.00019 21.2 0.0 2.3 8.3 0.0 3.3 3 0 0 3 3 3 2 PQQ enzyme repeat DUF5046 PF16465.5 RKO84259.1 - 0.00065 19.2 0.2 0.091 12.2 0.1 3.2 1 1 1 2 2 2 1 Domain of unknown function (DUF5046) BBS2_Mid PF14783.6 RKO84259.1 - 0.0014 18.6 0.0 1.3 9.0 0.0 2.7 1 1 2 3 3 3 2 Ciliary BBSome complex subunit 2, middle region Frtz PF11768.8 RKO84259.1 - 0.0017 16.8 0.1 0.072 11.4 0.1 2.0 2 0 0 2 2 2 2 WD repeat-containing and planar cell polarity effector protein Fritz Ge1_WD40 PF16529.5 RKO84259.1 - 0.07 12.1 0.2 2.2 7.2 0.0 2.2 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein zf-MIZ PF02891.20 RKO84260.1 - 5.3e-15 54.9 0.1 8.4e-15 54.3 0.1 1.3 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger zf-Nse PF11789.8 RKO84260.1 - 0.00033 20.4 0.1 0.00074 19.3 0.1 1.6 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Cullin PF00888.22 RKO84261.1 - 5e-108 362.3 3.4 9.4e-100 335.0 0.2 2.4 1 1 1 2 2 2 2 Cullin family DUF3531 PF12049.8 RKO84261.1 - 0.013 15.5 0.1 0.031 14.2 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3531) DUF2096 PF09869.9 RKO84261.1 - 0.062 13.4 0.5 0.12 12.4 0.1 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2096) Ceramidase_alk PF04734.13 RKO84262.1 - 1.3e-148 495.8 0.0 1.5e-148 495.6 0.0 1.1 1 0 0 1 1 1 1 Neutral/alkaline non-lysosomal ceramidase, N-terminal Ceramidse_alk_C PF17048.5 RKO84262.1 - 5.4e-32 111.0 0.1 1e-31 110.1 0.1 1.5 1 0 0 1 1 1 1 Neutral/alkaline non-lysosomal ceramidase, C-terminal CBM_1 PF00734.18 RKO84264.1 - 1.8e-31 107.8 34.7 1.2e-12 47.6 4.7 3.9 3 0 0 3 3 3 3 Fungal cellulose binding domain Cellulase PF00150.18 RKO84264.1 - 3e-25 89.2 0.9 9.7e-19 67.9 0.0 3.2 2 1 1 3 3 3 3 Cellulase (glycosyl hydrolase family 5) Oxidored_FMN PF00724.20 RKO84265.1 - 0.00011 21.6 0.0 0.00012 21.4 0.0 1.1 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family zf-DNA_Pol PF08996.10 RKO84266.1 - 3.4e-30 105.2 0.7 3.7e-30 105.1 0.7 1.0 1 0 0 1 1 1 1 DNA Polymerase alpha zinc finger KIP1 PF07765.12 RKO84268.1 - 0.031 14.4 2.5 0.031 14.4 2.5 3.3 2 2 2 4 4 4 0 KIP1-like protein DUF4661 PF15576.6 RKO84268.1 - 7.2 6.4 20.7 9 6.1 20.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) Evr1_Alr PF04777.13 RKO84269.1 - 2.8e-06 27.7 0.0 7.4e-06 26.4 0.0 1.7 1 0 0 1 1 1 1 Erv1 / Alr family DUF3675 PF12428.8 RKO84269.1 - 0.096 13.2 0.1 0.26 11.8 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3675) Trp_oprn_chp PF09534.10 RKO84269.1 - 0.14 11.9 2.1 0.55 10.0 0.4 2.2 2 0 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Pkinase PF00069.25 RKO84271.1 - 1.8e-08 34.1 0.0 8.6e-08 31.9 0.0 1.8 2 0 0 2 2 2 1 Protein kinase domain O_Spanin_T7 PF17531.2 RKO84273.1 - 0.1 12.6 0.9 31 4.8 0.1 3.1 3 0 0 3 3 3 0 outer-membrane spanin sub-unit MBOAT_2 PF13813.6 RKO84275.1 - 0.13 12.5 0.0 3.8 7.8 0.1 2.2 2 0 0 2 2 2 0 Membrane bound O-acyl transferase family Tom22 PF04281.13 RKO84276.1 - 1.4e-26 93.0 1.7 1.6e-26 92.8 1.7 1.0 1 0 0 1 1 1 1 Mitochondrial import receptor subunit Tom22 WD40 PF00400.32 RKO84277.1 - 4.6e-05 24.1 0.5 8.3e-05 23.3 0.5 1.4 1 0 0 1 1 1 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO84277.1 - 0.058 13.7 0.0 0.084 13.2 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 4 WD40 domain DUF3368 PF11848.8 RKO84277.1 - 0.22 11.3 0.0 0.37 10.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3368) ABC_tran PF00005.27 RKO84278.1 - 5.1e-17 62.7 0.0 7.5e-17 62.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter ABC_trans_N PF14510.6 RKO84278.1 - 3.6e-10 40.3 0.0 8.3e-10 39.1 0.0 1.6 1 0 0 1 1 1 1 ABC-transporter N-terminal MFS_5 PF05631.14 RKO84280.1 - 2.2e-18 66.3 1.1 2.2e-18 66.3 1.1 1.4 2 0 0 2 2 2 1 Sugar-tranasporters, 12 TM MFS_1 PF07690.16 RKO84280.1 - 1.8e-05 23.8 4.9 1.8e-05 23.8 4.9 1.3 1 1 0 1 1 1 1 Major Facilitator Superfamily MFS_3 PF05977.13 RKO84280.1 - 0.00028 19.4 0.1 0.00028 19.4 0.1 1.4 2 0 0 2 2 2 1 Transmembrane secretion effector Piwi PF02171.17 RKO84281.1 - 9.5e-92 307.5 0.0 1.3e-91 307.1 0.0 1.2 1 0 0 1 1 1 1 Piwi domain ArgoMid PF16487.5 RKO84281.1 - 3.3e-05 24.1 0.0 0.00013 22.2 0.0 2.1 1 0 0 1 1 1 1 Mid domain of argonaute ArgoL2 PF16488.5 RKO84281.1 - 0.00033 20.9 0.1 0.0007 19.9 0.1 1.6 1 0 0 1 1 1 1 Argonaute linker 2 domain MAPKK1_Int PF08923.10 RKO84282.1 - 9.3e-20 70.6 0.0 9.7e-20 70.6 0.0 1.0 1 0 0 1 1 1 1 Mitogen-activated protein kinase kinase 1 interacting peroxidase PF00141.23 RKO84284.1 - 1e-19 71.2 0.3 1.2e-19 70.9 0.3 1.1 1 0 0 1 1 1 1 Peroxidase Peptidase_M16 PF00675.20 RKO84285.1 - 0.00013 22.0 0.0 0.00015 21.8 0.0 1.0 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Ricin_B_lectin PF00652.22 RKO84286.1 - 2.8e-37 127.8 17.1 1.3e-19 70.7 3.7 2.2 2 0 0 2 2 2 2 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 RKO84286.1 - 2.1e-35 121.3 28.4 2.9e-10 40.7 0.4 5.6 1 1 5 6 6 6 6 Ricin-type beta-trefoil lectin domain-like Adeno_hexon_C PF03678.14 RKO84286.1 - 0.00063 19.3 1.9 0.11 12.0 0.3 2.2 2 0 0 2 2 2 2 Hexon, adenovirus major coat protein, C-terminal domain DUF4469 PF14734.6 RKO84286.1 - 0.0015 18.6 0.3 0.44 10.7 0.1 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4469) with IG-like fold MCM PF00493.23 RKO84286.1 - 0.0028 16.8 0.0 0.3 10.1 0.0 2.2 2 0 0 2 2 2 1 MCM P-loop domain Colipase_C PF02740.14 RKO84286.1 - 0.031 14.4 7.5 1.5 9.1 1.7 2.6 2 0 0 2 2 2 0 Colipase, C-terminal domain Rbx_binding PF18113.1 RKO84286.1 - 0.038 13.8 0.2 4 7.3 0.0 2.5 2 0 0 2 2 2 0 Rubredoxin binding C-terminal domain LEA_3 PF03242.13 RKO84286.1 - 0.11 13.3 0.4 27 5.6 0.0 3.1 3 0 0 3 3 3 0 Late embryogenesis abundant protein LAMTOR5 PF16672.5 RKO84286.1 - 0.16 11.9 2.0 4.7 7.2 0.3 2.6 2 0 0 2 2 2 0 Ragulator complex protein LAMTOR5 Orf78 PF06024.12 RKO84286.1 - 0.24 11.7 0.8 0.49 10.7 0.1 1.9 2 0 0 2 2 2 0 Orf78 (ac78) HPIP_like PF18524.1 RKO84286.1 - 1.1 9.1 3.3 4.2 7.2 0.1 3.3 4 0 0 4 4 4 0 High potential iron-sulfur protein like EF-hand_1 PF00036.32 RKO84287.1 - 1.7e-30 102.3 8.8 6.2e-07 28.5 0.0 4.1 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 RKO84287.1 - 4.7e-27 94.2 1.8 4.5e-14 52.7 0.0 2.0 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 RKO84287.1 - 3.4e-25 85.8 6.8 1.5e-07 30.8 0.0 4.1 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 RKO84287.1 - 1.1e-20 73.2 10.5 5.8e-08 32.5 0.0 4.1 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 RKO84287.1 - 2.4e-18 64.7 9.1 9.5e-06 24.9 0.8 4.3 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 RKO84287.1 - 2.3e-10 40.6 0.1 9.3e-05 22.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain Dockerin_1 PF00404.18 RKO84287.1 - 2.2e-05 24.5 0.7 0.00067 19.8 0.1 2.2 2 0 0 2 2 2 1 Dockerin type I domain EF-hand_4 PF12763.7 RKO84287.1 - 5.6e-05 23.0 4.4 1.2 9.1 0.1 3.7 2 2 2 4 4 4 2 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 RKO84287.1 - 0.0031 17.5 0.3 0.1 12.5 0.1 2.4 2 1 0 2 2 2 1 Caleosin related protein EFhand_Ca_insen PF08726.10 RKO84287.1 - 0.0097 16.0 0.0 0.02 15.0 0.0 1.6 1 0 0 1 1 1 1 Ca2+ insensitive EF hand CoA_transf_3 PF02515.17 RKO84288.1 - 1.2e-34 120.0 0.0 2.1e-33 116.0 0.0 1.9 2 0 0 2 2 2 2 CoA-transferase family III PH PF00169.29 RKO84289.1 - 9.5e-07 29.3 0.0 1.7e-06 28.5 0.0 1.4 1 0 0 1 1 1 1 PH domain PH_11 PF15413.6 RKO84289.1 - 0.016 15.6 0.1 0.11 12.9 0.1 2.1 1 1 0 1 1 1 0 Pleckstrin homology domain Fis1_TPR_C PF14853.6 RKO84290.1 - 3.2e-21 75.1 0.9 5.9e-21 74.3 0.9 1.4 1 0 0 1 1 1 1 Fis1 C-terminal tetratricopeptide repeat Fis1_TPR_N PF14852.6 RKO84290.1 - 5e-16 58.1 0.8 8.9e-16 57.3 0.2 1.8 2 0 0 2 2 2 1 Fis1 N-terminal tetratricopeptide repeat TPR_2 PF07719.17 RKO84290.1 - 0.0081 16.2 2.1 0.02 15.0 1.4 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO84290.1 - 0.11 13.2 0.6 0.76 10.6 0.2 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat Pribosyltran PF00156.27 RKO84291.1 - 2.2e-13 50.0 0.3 4.7e-13 49.0 0.3 1.5 1 1 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 RKO84291.1 - 0.013 15.0 0.0 0.018 14.5 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase UPRTase PF14681.6 RKO84291.1 - 0.019 14.4 0.0 0.025 14.0 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase CPT PF07931.12 RKO84291.1 - 0.046 13.6 0.3 0.069 13.0 0.3 1.1 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein Synaptobrevin PF00957.21 RKO84292.1 - 8.2e-22 76.8 2.6 9.5e-22 76.6 2.6 1.1 1 0 0 1 1 1 1 Synaptobrevin Fzo_mitofusin PF04799.13 RKO84292.1 - 0.046 13.3 0.4 0.046 13.3 0.4 1.0 1 0 0 1 1 1 0 fzo-like conserved region NPV_P10 PF05531.12 RKO84292.1 - 0.092 13.2 1.7 0.17 12.4 1.8 1.4 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF4566 PF15130.6 RKO84292.1 - 0.1 12.0 0.0 0.11 11.9 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4566) TMEM65 PF10507.9 RKO84292.1 - 0.12 12.4 0.1 0.13 12.3 0.1 1.1 1 0 0 1 1 1 0 Transmembrane protein 65 DUF2937 PF11157.8 RKO84292.1 - 0.14 11.8 0.8 0.15 11.7 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2937) zf-MYND PF01753.18 RKO84293.1 - 3.3e-09 36.7 3.4 7.4e-09 35.6 3.4 1.6 1 0 0 1 1 1 1 MYND finger PDCD2_C PF04194.13 RKO84293.1 - 6.8e-06 26.3 2.3 2.8e-05 24.3 2.4 1.9 1 1 0 1 1 1 1 Programmed cell death protein 2, C-terminal putative domain Allantoicase PF03561.15 RKO84294.1 - 0.0021 18.0 0.1 0.0035 17.3 0.1 1.3 1 0 0 1 1 1 1 Allantoicase repeat peroxidase PF00141.23 RKO84295.1 - 7.1e-10 39.0 0.0 1.4e-09 38.0 0.0 1.4 1 1 0 1 1 1 1 Peroxidase Pkinase PF00069.25 RKO84296.1 - 1e-30 107.0 0.0 1.2e-30 106.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO84296.1 - 2.1e-18 66.6 0.0 3.1e-18 66.0 0.0 1.3 1 1 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO84296.1 - 0.04 12.7 0.0 0.047 12.5 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase PG_binding_1 PF01471.18 RKO84297.1 - 2.5e-07 30.8 0.1 1e-05 25.6 0.0 2.2 2 0 0 2 2 2 1 Putative peptidoglycan binding domain DPRP PF04244.13 RKO84297.1 - 0.0022 17.9 0.0 0.0029 17.5 0.0 1.1 1 0 0 1 1 1 1 Deoxyribodipyrimidine photo-lyase-related protein NAD_binding_5 PF07994.12 RKO84297.1 - 0.027 13.8 0.0 0.037 13.4 0.0 1.1 1 0 0 1 1 1 0 Myo-inositol-1-phosphate synthase Nucleo_P87 PF07267.11 RKO84298.1 - 0.19 10.5 1.4 0.27 10.1 1.4 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 YL1 PF05764.13 RKO84298.1 - 0.89 9.6 22.0 5.5 7.0 18.2 2.1 2 0 0 2 2 2 0 YL1 nuclear protein Cwf_Cwc_15 PF04889.12 RKO84298.1 - 1.1 8.9 17.7 0.23 11.2 11.3 2.1 2 0 0 2 2 2 0 Cwf15/Cwc15 cell cycle control protein BUD22 PF09073.10 RKO84298.1 - 1.7 7.9 14.1 0.37 10.1 9.1 1.9 2 0 0 2 2 2 0 BUD22 Roughex PF06020.11 RKO84298.1 - 4.8 6.2 10.5 9.5 5.2 10.5 1.4 1 0 0 1 1 1 0 Drosophila roughex protein RPN2_C PF18004.1 RKO84298.1 - 8.3 6.3 7.7 5.5 6.9 3.2 2.1 2 0 0 2 2 2 0 26S proteasome regulatory subunit RPN2 C-terminal domain EPL1 PF10513.9 RKO84300.1 - 0.81 10.1 10.4 1.6 9.1 6.7 2.4 2 0 0 2 2 2 0 Enhancer of polycomb-like DUF4770 PF15994.5 RKO84300.1 - 1.2 9.4 15.7 0.13 12.5 8.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4770) ABC2_membrane_2 PF12679.7 RKO84300.1 - 4.9 6.3 4.8 2.2 7.5 0.4 2.1 2 0 0 2 2 2 0 ABC-2 family transporter protein CPSF100_C PF13299.6 RKO84300.1 - 6.5 6.9 11.7 8 6.6 5.9 2.3 2 0 0 2 2 2 0 Cleavage and polyadenylation factor 2 C-terminal Gti1_Pac2 PF09729.9 RKO84300.1 - 6.8 6.7 7.9 17 5.4 7.9 1.7 1 1 0 1 1 1 0 Gti1/Pac2 family Eapp_C PF10238.9 RKO84300.1 - 9.6 6.3 12.5 0.83 9.7 4.8 2.3 2 0 0 2 2 2 0 E2F-associated phosphoprotein PfkB PF00294.24 RKO84301.1 - 1.4e-05 24.6 1.3 9.7e-05 21.8 1.3 1.9 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 RKO84301.1 - 0.088 12.2 0.1 0.13 11.7 0.1 1.2 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase Robl_LC7 PF03259.17 RKO84303.1 - 5.2e-06 26.1 0.1 1.6e-05 24.6 0.1 1.7 2 0 0 2 2 2 1 Roadblock/LC7 domain Ank_5 PF13857.6 RKO84304.1 - 2.1e-14 53.4 3.3 0.0091 16.3 0.0 7.0 7 0 0 7 7 7 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO84304.1 - 1.2e-10 41.6 0.6 0.11 13.1 0.0 6.4 6 1 1 7 7 7 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO84304.1 - 9.8e-10 38.9 0.1 0.27 11.8 0.1 5.3 4 1 0 4 4 4 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO84304.1 - 4e-07 29.8 3.1 17 6.4 0.0 7.0 8 0 0 8 8 8 2 Ankyrin repeat DUF5049 PF16468.5 RKO84304.1 - 0.0045 16.9 0.0 10 6.1 0.0 4.3 4 1 1 5 5 5 1 Domain of unknown function (DUF5049) KAR9 PF08580.10 RKO84305.1 - 0.34 9.4 3.7 0.41 9.1 3.7 1.0 1 0 0 1 1 1 0 Yeast cortical protein KAR9 Adeno_E3_CR2 PF02439.15 RKO84306.1 - 0.00052 19.7 5.4 0.00096 18.9 5.4 1.4 1 0 0 1 1 1 1 Adenovirus E3 region protein CR2 SKG6 PF08693.10 RKO84306.1 - 0.035 13.5 2.6 0.061 12.7 2.6 1.4 1 0 0 1 1 1 0 Transmembrane alpha-helix domain VSP PF03302.13 RKO84306.1 - 0.043 12.7 5.6 0.058 12.3 5.6 1.1 1 0 0 1 1 1 0 Giardia variant-specific surface protein Hum_adeno_E3A PF05393.11 RKO84306.1 - 0.16 12.0 0.0 11 6.1 0.0 2.3 2 0 0 2 2 2 0 Human adenovirus early E3A glycoprotein Shisa PF13908.6 RKO84306.1 - 0.42 10.8 1.8 0.67 10.2 1.1 1.7 1 1 0 1 1 1 0 Wnt and FGF inhibitory regulator RNase_H PF00075.24 RKO84307.1 - 9.7e-36 123.1 0.0 1.1e-35 122.9 0.0 1.0 1 0 0 1 1 1 1 RNase H RVT_3 PF13456.6 RKO84307.1 - 0.027 14.3 0.0 0.053 13.3 0.0 1.6 2 0 0 2 2 2 0 Reverse transcriptase-like YfhD PF14151.6 RKO84308.1 - 0.15 12.2 0.1 0.15 12.2 0.1 3.3 3 0 0 3 3 3 0 YfhD-like protein DTHCT PF08070.11 RKO84308.1 - 9.5 7.0 39.7 16 6.3 15.5 3.2 1 1 1 2 2 2 0 DTHCT (NUC029) region CTD_bind PF04818.13 RKO84310.1 - 1.2e-08 35.7 0.0 2.7e-08 34.5 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase II-binding domain. Cytochrom_B558a PF05038.13 RKO84310.1 - 0.83 9.2 5.5 1.5 8.4 5.5 1.3 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit PAT1 PF09770.9 RKO84310.1 - 1.5 7.0 15.8 2.2 6.4 15.8 1.2 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 Lin-8 PF03353.15 RKO84310.1 - 3.4 7.1 8.3 5.3 6.5 8.3 1.2 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist ERCC3_RAD25_C PF16203.5 RKO84311.1 - 1.9e-40 138.6 0.1 9.3e-34 116.7 0.2 2.2 2 0 0 2 2 2 2 ERCC3/RAD25/XPB C-terminal helicase Helicase_C PF00271.31 RKO84311.1 - 1.3e-09 38.4 0.0 3e-09 37.2 0.0 1.6 1 1 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO84311.1 - 0.00091 19.3 0.0 0.0015 18.6 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 RKO84311.1 - 0.17 11.7 0.0 0.27 11.0 0.0 1.3 1 0 0 1 1 1 0 DEAD/DEAH box helicase F-box-like PF12937.7 RKO84314.1 - 2.2e-06 27.4 1.5 4.3e-06 26.5 0.3 2.1 2 0 0 2 2 2 1 F-box-like LRR_4 PF12799.7 RKO84314.1 - 0.0067 16.8 0.0 1.9 9.1 0.0 3.9 3 1 0 3 3 3 1 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 RKO84314.1 - 0.0068 16.4 0.8 13 6.1 0.0 5.0 5 0 0 5 5 5 1 Leucine Rich repeat LRR_1 PF00560.33 RKO84314.1 - 1.6 9.5 3.1 1.6e+02 3.5 0.0 4.4 4 2 0 4 4 4 0 Leucine Rich Repeat Ribosomal_L18A PF01775.17 RKO84317.1 - 1.1e-55 186.9 0.4 1.4e-55 186.6 0.4 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A Peptidase_M13_N PF05649.13 RKO84318.1 - 4.1e-20 72.8 0.2 4.9e-20 72.6 0.2 1.1 1 0 0 1 1 1 1 Peptidase family M13 Neur PF00064.18 RKO84318.1 - 0.041 12.6 0.1 0.049 12.4 0.1 1.1 1 0 0 1 1 1 0 Neuraminidase CD34_antigen PF06365.12 RKO84318.1 - 0.17 11.4 0.0 0.29 10.7 0.0 1.3 1 0 0 1 1 1 0 CD34/Podocalyxin family SurA_N_3 PF13624.6 RKO84318.1 - 0.25 11.1 0.0 0.34 10.7 0.0 1.3 1 0 0 1 1 1 0 SurA N-terminal domain Asp PF00026.23 RKO84319.1 - 1.1e-17 64.5 0.0 1.1e-17 64.4 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Pkinase PF00069.25 RKO84321.1 - 8.2e-31 107.3 0.0 9.9e-31 107.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO84321.1 - 2.6e-11 43.3 0.0 3.3e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 RKO84321.1 - 0.043 12.7 0.0 0.052 12.5 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 RKO84321.1 - 0.16 11.3 0.0 0.25 10.6 0.0 1.4 1 1 0 1 1 1 0 Kinase-like CSN5_C PF18323.1 RKO84322.1 - 0.013 16.4 0.4 0.079 13.9 0.0 2.4 2 1 0 2 2 2 0 Cop9 signalosome subunit 5 C-terminal domain DUF908 PF06012.12 RKO84322.1 - 0.47 9.8 3.5 0.63 9.4 3.5 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) Mucin PF01456.17 RKO84322.1 - 0.77 9.7 37.9 0.17 11.9 32.7 2.1 2 0 0 2 2 2 0 Mucin-like glycoprotein 7tm_1 PF00001.21 RKO84323.1 - 4.1e-11 42.7 0.0 7.3e-11 41.9 0.0 1.4 1 0 0 1 1 1 1 7 transmembrane receptor (rhodopsin family) DUF2781 PF10914.8 RKO84323.1 - 0.0077 16.7 0.4 0.021 15.3 0.4 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2781) Leg1 PF05612.12 RKO84323.1 - 0.13 11.4 0.1 0.2 10.8 0.1 1.2 1 0 0 1 1 1 0 Leg1 Ax_dynein_light PF10211.9 RKO84325.1 - 9.3e-08 32.2 6.4 2.4e-07 30.9 6.4 1.6 1 1 0 1 1 1 1 Axonemal dynein light chain Mg_chelatase_C PF13335.6 RKO84325.1 - 0.015 15.9 0.2 0.05 14.2 0.2 1.9 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI C-terminal Lipoprotein_20 PF13942.6 RKO84325.1 - 0.12 12.3 2.9 0.24 11.3 2.9 1.5 1 1 0 1 1 1 0 YfhG lipoprotein TSNAXIP1_N PF15739.5 RKO84325.1 - 0.37 11.2 4.5 0.26 11.7 2.6 1.7 2 0 0 2 2 2 0 Translin-associated factor X-interacting N-terminus Med13_C PF06333.12 RKO84330.1 - 3.3 6.9 6.2 6.7 5.9 6.2 1.4 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain Kelch_6 PF13964.6 RKO84331.1 - 2.4e-06 27.6 11.2 0.00023 21.3 0.1 4.6 3 1 2 5 5 5 2 Kelch motif Kelch_4 PF13418.6 RKO84331.1 - 2.1e-05 24.4 5.9 0.053 13.5 0.0 4.0 3 1 1 4 4 4 2 Galactose oxidase, central domain Kelch_3 PF13415.6 RKO84331.1 - 8.9e-05 22.7 8.6 2 8.8 0.0 4.7 5 0 0 5 5 5 3 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO84331.1 - 0.00044 20.2 0.0 0.81 9.7 0.0 2.7 2 0 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 RKO84331.1 - 0.00068 19.2 4.0 0.66 9.6 0.1 4.6 5 0 0 5 5 5 2 Kelch motif Kelch_2 PF07646.15 RKO84331.1 - 0.0011 18.8 1.5 0.97 9.5 0.0 4.2 5 0 0 5 5 5 1 Kelch motif Y_phosphatase3 PF13350.6 RKO84332.1 - 5.2e-30 105.1 0.0 8.3e-30 104.5 0.0 1.3 1 1 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase PF00102.27 RKO84332.1 - 0.00015 21.5 0.0 0.00023 20.8 0.0 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase2 PF03162.13 RKO84332.1 - 0.00078 19.1 0.0 0.0012 18.5 0.0 1.3 1 0 0 1 1 1 1 Tyrosine phosphatase family Myotub-related PF06602.14 RKO84332.1 - 0.26 10.2 0.0 0.39 9.6 0.0 1.2 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain GalP_UDP_transf PF01087.22 RKO84334.1 - 7.2e-63 212.3 0.1 1.3e-62 211.5 0.1 1.4 1 0 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, N-terminal domain GalP_UDP_tr_C PF02744.17 RKO84334.1 - 2.6e-59 199.7 0.0 6.4e-59 198.4 0.0 1.6 2 0 0 2 2 2 1 Galactose-1-phosphate uridyl transferase, C-terminal domain DUF4921 PF16268.5 RKO84334.1 - 0.00018 20.5 0.2 0.11 11.2 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4921) DUF4931 PF16285.5 RKO84334.1 - 0.14 11.5 0.0 0.21 10.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4931) CoA_transf_3 PF02515.17 RKO84335.1 - 2.5e-21 76.2 0.0 2.8e-21 76.1 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III SAM_4 PF18017.1 RKO84335.1 - 0.21 11.6 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) GRP PF07172.11 RKO84336.1 - 0.067 13.9 28.0 0.85 10.3 1.8 2.2 2 0 0 2 2 2 0 Glycine rich protein family Adeno_PX PF05829.12 RKO84336.1 - 1.2 9.1 7.2 5 7.1 0.6 2.4 2 0 0 2 2 2 0 Adenovirus late L2 mu core protein (Protein X) DIM PF08194.12 RKO84336.1 - 1.5 9.1 4.0 16 5.8 0.4 2.2 2 0 0 2 2 2 0 DIM protein DUF2842 PF11003.8 RKO84336.1 - 3.3 8.0 4.6 14 6.1 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2842) Xan_ur_permease PF00860.20 RKO84336.1 - 5.2 5.7 7.1 5.1 5.7 0.4 2.0 2 0 0 2 2 2 0 Permease family Histone PF00125.24 RKO84338.1 - 9.1e-17 61.6 2.0 9.1e-17 61.6 2.0 2.1 1 1 1 2 2 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 RKO84338.1 - 6.1e-09 36.0 0.3 6.1e-09 36.0 0.3 1.9 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Nop14 PF04147.12 RKO84338.1 - 3.1e-05 22.5 33.3 3.6e-05 22.2 33.3 1.0 1 0 0 1 1 1 1 Nop14-like family SDA1 PF05285.12 RKO84338.1 - 3.2e-05 23.5 29.5 3.2e-05 23.5 29.5 1.1 1 0 0 1 1 1 1 SDA1 DUF2457 PF10446.9 RKO84338.1 - 6e-05 22.4 29.5 7.7e-05 22.0 29.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2457) CENP-T_C PF15511.6 RKO84338.1 - 0.00015 21.9 0.0 0.00025 21.1 0.0 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TFIIF_alpha PF05793.12 RKO84338.1 - 0.00026 19.7 28.6 0.00035 19.3 28.6 1.2 1 0 0 1 1 1 1 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Mpp10 PF04006.12 RKO84338.1 - 0.00072 18.1 31.1 0.0008 18.0 31.1 1.2 1 0 0 1 1 1 1 Mpp10 protein TFIID_20kDa PF03847.13 RKO84338.1 - 0.00085 19.8 0.0 0.0016 18.9 0.0 1.3 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A MDM1 PF15501.6 RKO84338.1 - 0.0097 15.1 20.0 0.01 15.0 20.0 1.2 1 0 0 1 1 1 1 Nuclear protein MDM1 CDC45 PF02724.14 RKO84338.1 - 0.013 13.8 28.0 0.015 13.6 28.0 1.1 1 0 0 1 1 1 0 CDC45-like protein CENP-S PF15630.6 RKO84338.1 - 0.018 15.4 0.1 0.053 13.9 0.1 1.8 1 0 0 1 1 1 0 CENP-S protein YL1 PF05764.13 RKO84338.1 - 0.063 13.4 36.1 0.086 12.9 36.1 1.3 1 0 0 1 1 1 0 YL1 nuclear protein CCSAP PF15748.5 RKO84338.1 - 0.34 11.0 24.1 0.44 10.7 24.1 1.2 1 0 0 1 1 1 0 Centriole, cilia and spindle-associated Presenilin PF01080.17 RKO84338.1 - 1.3 7.7 20.1 1.4 7.7 20.1 1.2 1 0 0 1 1 1 0 Presenilin LAP1C PF05609.12 RKO84338.1 - 1.6 7.7 22.7 1.6 7.7 22.7 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) Cwf_Cwc_15 PF04889.12 RKO84338.1 - 2 8.1 29.4 2.8 7.6 29.4 1.3 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Hid1 PF12722.7 RKO84338.1 - 3.9 5.5 20.9 4.1 5.4 20.9 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Apt1 PF10351.9 RKO84338.1 - 4.1 6.2 15.1 4.6 6.0 15.1 1.1 1 0 0 1 1 1 0 Golgi-body localisation protein domain Lin-8 PF03353.15 RKO84338.1 - 4.6 6.7 29.1 5.5 6.5 29.1 1.1 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Macoilin PF09726.9 RKO84338.1 - 4.9 5.6 14.6 5.2 5.5 14.6 1.0 1 0 0 1 1 1 0 Macoilin family Peptidase_S64 PF08192.11 RKO84338.1 - 5 5.5 17.1 5.5 5.3 17.1 1.1 1 0 0 1 1 1 0 Peptidase family S64 DUF2151 PF10221.9 RKO84338.1 - 5.9 5.4 15.0 7.9 4.9 15.0 1.3 1 0 0 1 1 1 0 Cell cycle and development regulator LTV PF04180.14 RKO84338.1 - 6.1 6.5 28.4 8.5 6.0 28.4 1.2 1 0 0 1 1 1 0 Low temperature viability protein eIF-3c_N PF05470.12 RKO84338.1 - 8.3 4.6 18.7 10 4.3 18.7 1.4 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus Pept_tRNA_hydro PF01195.19 RKO84339.1 - 1.7e-27 96.5 0.0 2.1e-27 96.2 0.0 1.1 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase IKI3 PF04762.12 RKO84341.1 - 8.2e-111 371.6 0.0 9.1e-89 298.7 0.0 2.2 2 0 0 2 2 2 2 IKI3 family AAA PF00004.29 RKO84342.1 - 1.6e-16 60.9 0.0 2.7e-16 60.2 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 RKO84342.1 - 0.0014 19.0 0.0 0.088 13.2 0.2 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_lid_3 PF17862.1 RKO84342.1 - 0.0037 17.0 0.0 0.0076 16.0 0.0 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_22 PF13401.6 RKO84342.1 - 0.021 15.1 0.5 0.35 11.1 0.1 2.2 1 1 1 2 2 2 0 AAA domain ATPase PF06745.13 RKO84342.1 - 0.04 13.3 0.3 0.065 12.6 0.3 1.3 1 0 0 1 1 1 0 KaiC IstB_IS21 PF01695.17 RKO84342.1 - 0.053 13.3 0.0 0.089 12.5 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_5 PF07728.14 RKO84342.1 - 0.08 12.9 0.5 0.29 11.1 0.5 2.0 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 RKO84342.1 - 0.095 12.4 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 RKO84342.1 - 0.1 12.0 1.3 0.18 11.2 0.2 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI NACHT PF05729.12 RKO84342.1 - 0.13 12.2 2.3 0.76 9.7 0.6 2.1 2 0 0 2 2 2 0 NACHT domain DUF2075 PF09848.9 RKO84342.1 - 0.17 11.1 0.2 0.3 10.3 0.2 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Dymeclin PF09742.9 RKO84343.1 - 1.8e-45 155.5 0.0 2.1e-45 155.3 0.0 1.0 1 0 0 1 1 1 1 Dyggve-Melchior-Clausen syndrome protein Hid1 PF12722.7 RKO84343.1 - 2.4e-06 26.0 0.0 3.5e-06 25.5 0.0 1.2 1 0 0 1 1 1 1 High-temperature-induced dauer-formation protein NARG2_C PF10505.9 RKO84344.1 - 7.8e-09 35.4 0.0 1.2e-08 34.8 0.0 1.3 1 0 0 1 1 1 1 NMDA receptor-regulated gene protein 2 C-terminus Glyco_hydro_28 PF00295.17 RKO84345.1 - 7.1e-38 130.5 6.1 8.5e-38 130.2 6.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 Beta_helix PF13229.6 RKO84345.1 - 1e-08 35.2 2.0 2e-08 34.2 1.8 1.5 1 1 0 1 1 1 1 Right handed beta helix region NosD PF05048.13 RKO84345.1 - 0.076 12.3 2.4 0.15 11.3 1.2 1.8 1 1 0 2 2 2 0 Periplasmic copper-binding protein (NosD) Pribosyltran PF00156.27 RKO84346.1 - 2.4e-08 33.6 0.2 6.9e-06 25.7 0.0 2.1 2 0 0 2 2 2 2 Phosphoribosyl transferase domain F-box-like PF12937.7 RKO84347.1 - 0.00053 19.8 2.2 0.00053 19.8 0.3 2.0 2 0 0 2 2 2 1 F-box-like LRR_6 PF13516.6 RKO84347.1 - 0.0014 18.5 0.3 4.6 7.6 0.0 3.2 3 0 0 3 3 3 2 Leucine Rich repeat Nup84_Nup100 PF04121.13 RKO84350.1 - 6.7e-95 318.8 0.0 8e-49 166.4 0.0 2.1 1 1 1 2 2 2 2 Nuclear pore protein 84 / 107 APH PF01636.23 RKO84351.1 - 0.0039 17.1 0.0 0.0066 16.4 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 RKO84351.1 - 0.067 12.5 0.0 0.11 11.9 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 RKO84351.1 - 0.24 10.7 0.0 0.36 10.1 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain Bax1-I PF01027.20 RKO84352.1 - 1.9e-11 44.2 15.8 2.6e-11 43.8 15.8 1.2 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 Syntaxin_2 PF14523.6 RKO84354.1 - 1.2e-08 35.2 0.2 2.1e-08 34.4 0.2 1.4 1 0 0 1 1 1 1 Syntaxin-like protein ANAPC4_WD40 PF12894.7 RKO84355.1 - 0.0027 18.0 0.0 0.007 16.6 0.0 1.6 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain Reg_prop PF07494.11 RKO84355.1 - 0.12 12.6 0.1 0.26 11.6 0.1 1.6 1 0 0 1 1 1 0 Two component regulator propeller GATA PF00320.27 RKO84357.1 - 1.6e-13 50.0 3.7 2.8e-13 49.2 3.7 1.4 1 0 0 1 1 1 1 GATA zinc finger DZR PF12773.7 RKO84357.1 - 0.075 13.1 0.9 0.21 11.7 0.9 1.7 1 0 0 1 1 1 0 Double zinc ribbon Cupin_8 PF13621.6 RKO84358.1 - 9.4e-12 45.2 0.0 1.3e-11 44.8 0.0 1.2 1 1 0 1 1 1 1 Cupin-like domain BetaGal_dom4_5 PF13364.6 RKO84362.1 - 1.5e-39 135.1 0.3 5.2e-22 78.6 0.0 2.7 2 0 0 2 2 2 2 Beta-galactosidase jelly roll domain Glyco_hydro_35 PF01301.19 RKO84362.1 - 9.9e-26 91.1 0.2 1.4e-25 90.6 0.2 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 35 BetaGal_dom2 PF10435.9 RKO84362.1 - 1.3e-22 80.5 0.0 2.1e-22 79.8 0.0 1.3 1 0 0 1 1 1 1 Beta-galactosidase, domain 2 BetaGal_dom3 PF13363.6 RKO84362.1 - 2.3e-09 36.7 0.0 1.9e-08 33.8 0.0 2.3 2 0 0 2 2 2 1 Beta-galactosidase, domain 3 Mem_trans PF03547.18 RKO84363.1 - 1.6e-29 102.5 0.4 2.6e-29 101.8 0.4 1.3 1 0 0 1 1 1 1 Membrane transport protein DUF3392 PF11872.8 RKO84363.1 - 0.19 12.0 2.7 0.53 10.6 2.7 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3392) G-alpha PF00503.20 RKO84365.1 - 3.5e-121 404.7 0.6 4.2e-121 404.4 0.6 1.0 1 0 0 1 1 1 1 G-protein alpha subunit Arf PF00025.21 RKO84365.1 - 8.9e-17 61.1 2.7 3.4e-12 46.2 0.5 2.6 2 1 0 2 2 2 2 ADP-ribosylation factor family Gtr1_RagA PF04670.12 RKO84365.1 - 0.00029 20.3 4.3 0.01 15.2 0.3 2.6 2 1 0 2 2 2 2 Gtr1/RagA G protein conserved region zf-CHC2 PF01807.20 RKO84365.1 - 0.00045 20.0 0.1 0.0019 18.0 0.0 2.0 2 0 0 2 2 2 1 CHC2 zinc finger MMR_HSR1 PF01926.23 RKO84365.1 - 0.0005 20.1 0.0 1.2 9.2 0.0 2.6 1 1 1 2 2 2 2 50S ribosome-binding GTPase Roc PF08477.13 RKO84365.1 - 0.00052 20.2 0.3 0.72 10.1 0.0 2.7 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase AAA_15 PF13175.6 RKO84365.1 - 0.0011 18.8 0.0 0.0017 18.1 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain ATP_bind_1 PF03029.17 RKO84365.1 - 0.0062 16.3 0.2 2 8.2 0.0 3.0 3 0 0 3 3 3 1 Conserved hypothetical ATP binding protein AAA_29 PF13555.6 RKO84365.1 - 0.015 15.1 0.0 0.031 14.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain GTP_EFTU PF00009.27 RKO84365.1 - 0.016 14.7 0.0 1.6 8.2 0.0 2.5 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain MCM PF00493.23 RKO84365.1 - 0.062 12.4 0.0 0.11 11.6 0.0 1.4 1 0 0 1 1 1 0 MCM P-loop domain FtsK_SpoIIIE PF01580.18 RKO84365.1 - 0.069 12.5 0.0 0.16 11.3 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family Rad17 PF03215.15 RKO84365.1 - 0.092 12.7 0.1 0.22 11.5 0.1 1.6 1 0 0 1 1 1 0 Rad17 P-loop domain EF-hand_7 PF13499.6 RKO84367.1 - 8.8e-07 29.3 0.2 0.00011 22.6 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 RKO84367.1 - 0.00019 20.7 1.4 0.47 10.1 0.0 2.6 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 RKO84367.1 - 0.0027 17.5 0.1 2.5 8.0 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 RKO84367.1 - 0.11 12.4 0.0 16 5.8 0.0 2.4 2 0 0 2 2 2 0 EF-hand domain Citrate_synt PF00285.21 RKO84369.1 - 2e-74 250.8 0.0 2.4e-74 250.6 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain SH3_9 PF14604.6 RKO84370.1 - 3e-06 27.0 0.1 5.2e-06 26.2 0.1 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO84370.1 - 0.00034 20.1 0.0 0.00058 19.4 0.0 1.4 1 0 0 1 1 1 1 SH3 domain NAD_binding_1 PF00175.21 RKO84370.1 - 0.0034 18.0 0.0 0.011 16.4 0.0 1.7 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain XendoU PF09412.10 RKO84373.1 - 5.3e-89 297.9 0.0 7.4e-89 297.5 0.0 1.2 1 0 0 1 1 1 1 Endoribonuclease XendoU SOG2 PF10428.9 RKO84373.1 - 2.3 7.3 15.8 3.7 6.6 15.8 1.4 1 0 0 1 1 1 0 RAM signalling pathway protein DUF2039 PF10217.9 RKO84375.1 - 0.076 13.4 0.6 0.21 12.0 0.6 1.7 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) SnAPC_2_like PF11035.8 RKO84376.1 - 0.024 14.8 0.3 0.032 14.4 0.3 1.1 1 0 0 1 1 1 0 Small nuclear RNA activating complex subunit 2, SNAP190 Myb Mob1_phocein PF03637.17 RKO84377.1 - 4.9e-34 117.8 0.0 5.6e-34 117.6 0.0 1.0 1 0 0 1 1 1 1 Mob1/phocein family Tubulin PF00091.25 RKO84380.1 - 2.8e-51 174.5 0.0 6.3e-51 173.4 0.0 1.5 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 RKO84380.1 - 2.2e-46 157.1 1.1 3.6e-46 156.4 0.1 1.9 3 0 0 3 3 3 1 Tubulin C-terminal domain Tubulin_2 PF13809.6 RKO84380.1 - 0.064 12.4 0.0 0.1 11.8 0.0 1.3 1 0 0 1 1 1 0 Tubulin like zf_CCCH_4 PF18345.1 RKO84381.1 - 0.016 15.2 3.9 0.016 15.2 3.9 2.9 3 1 0 3 3 3 0 Zinc finger domain zf-CCCH_4 PF18044.1 RKO84381.1 - 3.5 7.5 16.4 0.19 11.6 8.8 2.5 3 0 0 3 3 3 0 CCCH-type zinc finger Mannosyl_trans2 PF04188.13 RKO84382.1 - 8.5e-74 249.4 25.8 2.2e-71 241.5 25.8 2.9 1 1 0 1 1 1 1 Mannosyltransferase (PIG-V) PB1 PF00564.24 RKO84383.1 - 0.016 15.1 0.0 0.043 13.8 0.0 1.7 1 0 0 1 1 1 0 PB1 domain SelK_SelG PF10961.8 RKO84383.1 - 0.15 12.7 1.4 0.71 10.5 0.0 2.4 2 1 0 2 2 2 0 Selenoprotein SelK_SelG SH3_9 PF14604.6 RKO84384.1 - 3.6e-09 36.4 0.1 8.8e-09 35.1 0.1 1.6 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO84384.1 - 2.1e-06 27.2 0.1 4.7e-06 26.1 0.1 1.6 1 0 0 1 1 1 1 SH3 domain PAN_1 PF00024.26 RKO84384.1 - 3e-05 23.9 1.6 0.021 14.8 0.3 2.4 2 0 0 2 2 2 2 PAN domain SKG6 PF08693.10 RKO84384.1 - 0.00014 21.2 0.2 0.00014 21.2 0.2 1.9 2 0 0 2 2 2 1 Transmembrane alpha-helix domain Rax2 PF12768.7 RKO84384.1 - 0.0022 17.5 0.0 0.0035 16.8 0.0 1.3 1 0 0 1 1 1 1 Cortical protein marker for cell polarity SH3_2 PF07653.17 RKO84384.1 - 0.0081 15.8 0.1 0.016 14.9 0.1 1.4 1 0 0 1 1 1 1 Variant SH3 domain Gram_pos_anchor PF00746.21 RKO84384.1 - 0.13 12.2 8.7 6.3 6.8 5.8 2.8 1 1 1 2 2 2 0 LPXTG cell wall anchor motif PAN_4 PF14295.6 RKO84384.1 - 0.34 10.9 10.5 0.21 11.5 3.4 2.5 2 0 0 2 2 2 0 PAN domain FeoB_associated PF12669.7 RKO84384.1 - 0.34 11.3 0.1 0.34 11.3 0.1 2.4 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein PAN_3 PF08277.12 RKO84384.1 - 0.48 10.3 7.2 7.5 6.4 1.8 2.4 2 0 0 2 2 2 0 PAN-like domain TFIID_20kDa PF03847.13 RKO84385.1 - 0.039 14.4 0.2 62 4.2 0.1 3.2 3 0 0 3 3 3 0 Transcription initiation factor TFIID subunit A FKBP_C PF00254.28 RKO84386.1 - 4.6e-29 100.6 0.0 5e-29 100.5 0.0 1.0 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase DDE_Tnp_4 PF13359.6 RKO84387.1 - 0.022 14.4 0.1 0.035 13.8 0.1 1.2 1 0 0 1 1 1 0 DDE superfamily endonuclease Transposase_23 PF03017.14 RKO84387.1 - 0.18 11.8 0.0 1.2 9.1 0.0 2.1 2 0 0 2 2 2 0 TNP1/EN/SPM transposase CYYR1 PF10873.8 RKO84389.1 - 0.12 12.9 7.3 0.16 12.4 2.9 2.3 1 1 1 2 2 2 0 Cysteine and tyrosine-rich protein 1 F-box-like PF12937.7 RKO84391.1 - 4.5e-05 23.2 1.9 4.5e-05 23.2 1.9 2.4 2 0 0 2 2 2 1 F-box-like Amino_oxidase PF01593.24 RKO84392.1 - 8.2e-32 111.1 1.8 1.3e-24 87.4 0.3 2.0 1 1 1 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 RKO84392.1 - 2.6e-08 33.9 0.8 4.6e-08 33.2 0.3 1.7 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 RKO84392.1 - 5.5e-06 26.4 4.6 0.00024 21.1 0.2 2.2 2 0 0 2 2 2 2 FAD-NAD(P)-binding Thi4 PF01946.17 RKO84392.1 - 4.5e-05 22.8 0.4 7.8e-05 22.0 0.4 1.4 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.24 RKO84392.1 - 0.00039 19.6 1.8 0.00051 19.2 1.8 1.3 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 RKO84392.1 - 0.00044 19.9 3.3 0.00059 19.5 3.3 1.5 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 RKO84392.1 - 0.13 11.5 0.3 0.21 10.8 0.3 1.5 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 RKO84392.1 - 0.14 11.2 2.5 0.47 9.5 0.4 2.0 2 0 0 2 2 2 0 Lycopene cyclase protein Pyr_redox_3 PF13738.6 RKO84392.1 - 0.21 10.8 2.7 2.2 7.4 0.1 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 RKO84392.1 - 0.23 10.5 1.0 0.54 9.3 1.0 1.6 1 1 0 1 1 1 0 Glucose inhibited division protein A Zip PF02535.22 RKO84393.1 - 2.3e-23 83.0 4.1 6.7e-23 81.4 4.1 1.6 1 1 0 1 1 1 1 ZIP Zinc transporter DUF4418 PF14387.6 RKO84393.1 - 0.007 16.6 0.6 0.02 15.1 0.6 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4418) GST_C_2 PF13410.6 RKO84399.1 - 3.6e-15 55.7 0.0 5.3e-15 55.2 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 RKO84399.1 - 1.8e-12 47.4 0.2 9.3e-11 41.9 0.0 2.2 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 RKO84399.1 - 2e-09 37.5 0.0 3e-09 37.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 RKO84399.1 - 9e-07 29.0 0.0 1.6e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 RKO84399.1 - 0.0018 18.1 0.0 0.003 17.3 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain DHQ_synthase PF01761.20 RKO84400.1 - 5.1e-100 334.0 0.0 6.9e-100 333.5 0.0 1.2 1 0 0 1 1 1 1 3-dehydroquinate synthase EPSP_synthase PF00275.20 RKO84400.1 - 5.7e-47 160.3 0.1 8.2e-47 159.8 0.1 1.2 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Fe-ADH_2 PF13685.6 RKO84400.1 - 1.5e-07 31.4 0.2 1.4e-06 28.2 0.2 2.1 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 RKO84400.1 - 0.0026 16.6 0.6 0.031 13.1 1.6 2.3 2 1 0 2 2 2 1 Iron-containing alcohol dehydrogenase Aldedh PF00171.22 RKO84401.1 - 1.6e-115 386.2 0.2 2e-115 386.0 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 RKO84401.1 - 0.18 10.8 0.0 0.26 10.3 0.0 1.2 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) SDA1 PF05285.12 RKO84402.1 - 3 7.2 5.1 3.6 6.9 5.1 1.1 1 0 0 1 1 1 0 SDA1 Prothymosin PF03247.14 RKO84402.1 - 5.5 7.5 13.4 8.1 6.9 13.4 1.2 1 0 0 1 1 1 0 Prothymosin/parathymosin family VASt PF16016.5 RKO84403.1 - 2.5e-06 28.0 0.0 4.1e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 VAD1 Analog of StAR-related lipid transfer domain DUF812 PF05667.11 RKO84403.1 - 0.039 12.8 0.0 0.051 12.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Thyroglobulin_1 PF00086.18 RKO84404.1 - 0.07 12.8 0.3 0.21 11.3 0.2 1.8 2 0 0 2 2 2 0 Thyroglobulin type-1 repeat RINT1_TIP1 PF04437.13 RKO84405.1 - 1.7e-19 70.1 0.0 1.8e-19 70.0 0.0 1.0 1 0 0 1 1 1 1 RINT-1 / TIP-1 family Maf_N PF08383.11 RKO84405.1 - 0.13 12.0 0.4 3.1 7.6 0.0 2.7 3 0 0 3 3 3 0 Maf N-terminal region Mn_catalase PF05067.12 RKO84406.1 - 0.063 12.2 0.0 0.096 11.6 0.0 1.2 1 0 0 1 1 1 0 Manganese containing catalase Leu_zip PF15294.6 RKO84407.1 - 8.8e-05 22.2 29.3 0.00096 18.7 3.0 3.2 2 1 0 3 3 3 2 Leucine zipper DUF1611_N PF17396.2 RKO84407.1 - 0.0037 17.5 2.2 0.016 15.4 0.5 2.6 2 0 0 2 2 2 1 Domain of unknown function (DUF1611_N) Rossmann-like domain DUF948 PF06103.11 RKO84407.1 - 0.15 12.4 8.8 3.7 7.9 0.0 4.8 5 1 1 6 6 6 0 Bacterial protein of unknown function (DUF948) Fez1 PF06818.15 RKO84407.1 - 1.1 9.6 35.2 2.3 8.6 4.2 3.5 2 1 0 3 3 3 0 Fez1 NPV_P10 PF05531.12 RKO84407.1 - 1.3 9.6 7.2 23 5.5 0.0 4.9 5 1 2 7 7 7 0 Nucleopolyhedrovirus P10 protein SHE3 PF17078.5 RKO84407.1 - 1.6 8.4 0.0 1.6 8.4 0.0 5.0 3 1 1 4 4 4 0 SWI5-dependent HO expression protein 3 ADIP PF11559.8 RKO84407.1 - 2.5 8.2 41.2 2.8 8.0 0.4 4.7 3 1 0 4 4 4 0 Afadin- and alpha -actinin-Binding Sec34 PF04136.15 RKO84407.1 - 2.5 8.0 15.0 5.5 6.8 0.1 4.0 3 1 1 4 4 4 0 Sec34-like family YabA PF06156.13 RKO84407.1 - 2.9 8.6 23.9 1 10.0 0.1 5.1 3 1 2 5 5 5 0 Initiation control protein YabA Spc7 PF08317.11 RKO84407.1 - 6.3 5.6 40.1 1 8.2 10.9 3.3 2 1 0 3 3 3 0 Spc7 kinetochore protein DUF4549 PF15082.6 RKO84407.1 - 8.1 6.2 11.0 0.17 11.7 1.4 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4549) Mito_carr PF00153.27 RKO84408.1 - 2.6e-07 30.5 0.2 0.0001 22.1 0.1 2.1 2 0 0 2 2 2 2 Mitochondrial carrier protein Proteasome PF00227.26 RKO84409.1 - 2.2e-59 200.2 0.2 2.6e-59 199.9 0.2 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 RKO84409.1 - 1.3e-06 28.0 0.5 2.3e-06 27.2 0.5 1.4 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature BCL_N PF04714.13 RKO84410.1 - 0.59 10.2 4.7 2.1 8.5 1.9 2.3 2 0 0 2 2 2 0 BCL7, N-terminal conserver region MFMR_assoc PF16596.5 RKO84410.1 - 2.1 8.8 10.8 0.3 11.5 6.2 1.8 1 1 1 2 2 2 0 Disordered region downstream of MFMR DUF4360 PF14273.6 RKO84412.1 - 1.1e-13 51.5 0.5 3.3e-09 36.9 0.2 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4360) T6SS_VipA PF05591.12 RKO84413.1 - 0.023 14.5 0.1 0.049 13.4 0.1 1.5 1 0 0 1 1 1 0 Type VI secretion system, VipA, VC_A0107 or Hcp2 DUF2019 PF09450.10 RKO84413.1 - 0.58 10.1 4.8 0.41 10.6 1.2 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF2019) Exo_endo_phos PF03372.23 RKO84414.1 - 3.7e-08 33.2 0.0 6e-08 32.5 0.0 1.4 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family DUF601 PF04642.12 RKO84415.1 - 0.16 11.5 1.0 0.2 11.1 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function, DUF601 Med17 PF10156.9 RKO84416.1 - 1.1e-10 40.8 0.0 9.9e-06 24.5 0.0 2.1 2 0 0 2 2 2 2 Subunit 17 of Mediator complex Pho88 PF10032.9 RKO84417.1 - 0.0093 15.2 0.0 0.013 14.7 0.0 1.2 1 0 0 1 1 1 1 Phosphate transport (Pho88) Pho88 PF10032.9 RKO84418.1 - 8.3e-29 100.1 0.0 8.8e-29 100.1 0.0 1.0 1 0 0 1 1 1 1 Phosphate transport (Pho88) WD40 PF00400.32 RKO84419.1 - 1.9e-38 129.7 8.4 4.5e-08 33.6 0.6 5.5 5 0 0 5 5 5 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO84419.1 - 6.5e-11 42.4 0.3 0.011 16.1 0.0 4.0 1 1 3 4 4 4 4 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO84419.1 - 6.6e-05 21.8 3.6 0.028 13.1 0.0 3.7 1 1 3 4 4 4 2 Nucleoporin Nup120/160 Ge1_WD40 PF16529.5 RKO84419.1 - 0.00046 19.3 2.1 0.19 10.7 1.9 3.3 1 1 2 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein LisH PF08513.11 RKO84419.1 - 0.00063 19.6 0.0 0.0013 18.6 0.0 1.6 1 0 0 1 1 1 1 LisH eIF2A PF08662.11 RKO84419.1 - 0.0021 17.9 0.0 0.0037 17.2 0.0 1.4 1 0 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A Nucleoporin_N PF08801.11 RKO84419.1 - 0.0026 16.6 0.1 1.5 7.5 0.1 2.9 1 1 3 4 4 4 2 Nup133 N terminal like Snf7 PF03357.21 RKO84421.1 - 1.6e-32 112.5 16.3 3.7e-26 91.8 10.4 2.0 1 1 1 2 2 2 2 Snf7 NPV_P10 PF05531.12 RKO84421.1 - 0.00068 20.0 2.7 0.22 12.0 1.6 2.8 2 1 0 2 2 2 1 Nucleopolyhedrovirus P10 protein AATF-Che1 PF13339.6 RKO84421.1 - 0.025 15.3 3.0 1.7 9.3 2.7 2.1 1 1 1 2 2 2 0 Apoptosis antagonizing transcription factor PARG_cat PF05028.14 RKO84421.1 - 0.033 13.5 0.2 0.043 13.1 0.2 1.1 1 0 0 1 1 1 0 Poly (ADP-ribose) glycohydrolase (PARG) DUF87 PF01935.17 RKO84421.1 - 0.063 13.4 1.3 0.075 13.1 1.3 1.1 1 0 0 1 1 1 0 Helicase HerA, central domain DUF484 PF04340.12 RKO84421.1 - 0.15 11.7 5.9 0.89 9.2 2.0 2.0 1 1 1 2 2 2 0 Protein of unknown function, DUF484 FlaC_arch PF05377.11 RKO84421.1 - 0.2 12.0 11.1 1.4 9.3 0.2 3.4 3 1 1 4 4 4 0 Flagella accessory protein C (FlaC) CorA PF01544.18 RKO84421.1 - 0.39 10.0 7.2 0.11 11.8 4.0 1.6 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein EMP24_GP25L PF01105.24 RKO84421.1 - 0.74 9.7 7.2 1.6 8.6 0.2 2.2 1 1 0 2 2 2 0 emp24/gp25L/p24 family/GOLD zf-C4H2 PF10146.9 RKO84421.1 - 0.99 9.7 11.2 1.4 9.2 11.3 1.3 1 1 0 1 1 1 0 Zinc finger-containing protein cwf21 PF08312.12 RKO84421.1 - 5 7.4 7.8 22 5.3 0.2 2.4 2 0 0 2 2 2 0 cwf21 domain FapA PF03961.13 RKO84421.1 - 7.2 5.1 11.3 21 3.6 11.3 1.7 1 1 0 1 1 1 0 Flagellar Assembly Protein A WRC PF08879.10 RKO84422.1 - 0.09 12.5 0.1 0.14 11.9 0.1 1.2 1 0 0 1 1 1 0 WRC DUF4366 PF14283.6 RKO84423.1 - 0.024 14.7 0.2 0.028 14.5 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) NKAIN PF05640.14 RKO84429.1 - 0.058 12.6 0.0 0.14 11.4 0.0 1.6 1 1 1 2 2 2 0 Na,K-Atpase Interacting protein DUF1416 PF07210.12 RKO84431.1 - 0.15 11.9 2.1 0.76 9.7 0.1 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1416) AAA_22 PF13401.6 RKO84431.1 - 0.26 11.5 1.3 1.3 9.3 0.1 2.5 2 0 0 2 2 2 0 AAA domain Abhydrolase_6 PF12697.7 RKO84433.1 - 1.7e-08 35.4 0.0 2.1e-08 35.0 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 RKO84433.1 - 1e-07 32.3 0.0 1.6e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 Thioesterase domain Hydrolase_4 PF12146.8 RKO84433.1 - 1.2e-06 28.0 0.0 2.5e-06 27.0 0.0 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 PGAP1 PF07819.13 RKO84433.1 - 0.00052 19.8 0.1 0.001 18.8 0.1 1.5 1 1 0 1 1 1 1 PGAP1-like protein Abhydrolase_1 PF00561.20 RKO84433.1 - 0.0022 17.7 0.2 0.017 14.8 0.2 2.1 1 1 0 1 1 1 1 alpha/beta hydrolase fold DUF2974 PF11187.8 RKO84433.1 - 0.0036 16.9 0.0 0.0075 15.9 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Acyl_transf_1 PF00698.21 RKO84433.1 - 0.0038 16.8 0.2 0.0059 16.1 0.2 1.2 1 0 0 1 1 1 1 Acyl transferase domain Lipase_3 PF01764.25 RKO84433.1 - 0.011 15.5 0.0 0.03 14.2 0.0 1.7 2 0 0 2 2 2 0 Lipase (class 3) DUF3089 PF11288.8 RKO84433.1 - 0.018 14.6 0.0 0.031 13.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3089) LCAT PF02450.15 RKO84433.1 - 0.025 13.8 0.0 0.043 13.0 0.0 1.3 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase DUF915 PF06028.11 RKO84433.1 - 0.033 13.5 0.0 1.7 7.9 0.0 2.2 1 1 1 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) DUF726 PF05277.12 RKO84433.1 - 0.058 12.3 0.0 0.11 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF726) MORN_2 PF07661.13 RKO84433.1 - 0.088 13.1 0.0 31 5.3 0.0 2.6 2 0 0 2 2 2 0 MORN repeat variant DUF900 PF05990.12 RKO84433.1 - 0.1 12.1 0.0 0.34 10.4 0.0 1.9 1 1 1 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF900) Abhydrolase_8 PF06259.12 RKO84433.1 - 0.12 12.0 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase PKD PF00801.20 RKO84433.1 - 0.18 11.7 0.1 0.33 10.8 0.1 1.3 1 0 0 1 1 1 0 PKD domain Kelch_2 PF07646.15 RKO84434.1 - 5.8e-05 22.9 0.8 0.00029 20.7 0.2 2.2 2 0 0 2 2 2 1 Kelch motif Kelch_1 PF01344.25 RKO84434.1 - 0.0013 18.3 3.4 0.0075 15.8 0.3 2.4 2 0 0 2 2 2 1 Kelch motif Kelch_5 PF13854.6 RKO84434.1 - 0.011 15.7 1.0 0.052 13.6 0.3 2.2 2 0 0 2 2 2 0 Kelch motif Kelch_4 PF13418.6 RKO84434.1 - 0.13 12.3 1.9 0.24 11.4 0.4 2.2 2 0 0 2 2 2 0 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO84434.1 - 0.14 12.5 1.3 1.1 9.7 0.1 2.6 2 0 0 2 2 2 0 Kelch motif Kelch_3 PF13415.6 RKO84434.1 - 1.1 9.7 5.7 0.19 12.1 1.0 2.2 2 0 0 2 2 2 0 Galactose oxidase, central domain Kdo PF06293.14 RKO84435.1 - 3.5e-06 26.5 0.1 8.3e-06 25.3 0.0 1.6 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 RKO84435.1 - 0.00034 20.6 0.1 0.0004 20.4 0.1 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family EcKinase PF02958.20 RKO84435.1 - 0.2 10.9 0.0 1.5 8.0 0.0 1.9 1 1 1 2 2 2 0 Ecdysteroid kinase FPP PF05911.11 RKO84436.1 - 0.00024 19.5 8.9 0.00028 19.3 8.9 1.0 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil DUF948 PF06103.11 RKO84436.1 - 0.00081 19.6 2.3 1.2 9.4 0.0 2.7 2 1 1 3 3 3 2 Bacterial protein of unknown function (DUF948) DUF1664 PF07889.12 RKO84436.1 - 0.0012 18.9 8.7 0.01 15.9 3.3 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) Shugoshin_N PF07558.11 RKO84436.1 - 0.0029 17.4 4.9 0.0079 16.0 0.6 3.1 2 1 1 3 3 3 1 Shugoshin N-terminal coiled-coil region BRE1 PF08647.11 RKO84436.1 - 0.0043 17.1 7.1 0.0043 17.1 7.1 2.2 1 1 1 2 2 2 1 BRE1 E3 ubiquitin ligase ApoLp-III PF07464.11 RKO84436.1 - 0.0049 17.0 1.3 0.0083 16.2 1.3 1.4 1 0 0 1 1 1 1 Apolipophorin-III precursor (apoLp-III) Jnk-SapK_ap_N PF09744.9 RKO84436.1 - 0.0062 16.8 23.4 0.048 13.9 16.4 2.1 1 1 1 2 2 2 2 JNK_SAPK-associated protein-1 KASH_CCD PF14662.6 RKO84436.1 - 0.0077 16.1 19.9 0.17 11.7 2.5 2.1 1 1 1 2 2 2 2 Coiled-coil region of CCDC155 or KASH FAM76 PF16046.5 RKO84436.1 - 0.0085 15.5 7.4 0.0085 15.5 7.4 2.1 1 1 1 2 2 2 1 FAM76 protein Atg14 PF10186.9 RKO84436.1 - 0.024 13.8 14.0 0.031 13.3 14.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Tropomyosin_1 PF12718.7 RKO84436.1 - 0.025 14.7 21.4 0.059 13.5 21.3 1.8 1 1 0 1 1 1 0 Tropomyosin like Lectin_N PF03954.14 RKO84436.1 - 0.039 13.7 3.8 1 9.1 1.3 2.3 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain DUF4358 PF14270.6 RKO84436.1 - 0.046 14.0 2.6 0.051 13.9 0.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4358) ATG16 PF08614.11 RKO84436.1 - 0.068 13.4 20.4 0.069 13.4 4.6 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) DUF4140 PF13600.6 RKO84436.1 - 0.084 13.3 0.8 0.084 13.3 0.8 3.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Exonuc_VII_L PF02601.15 RKO84436.1 - 0.087 12.4 6.7 0.11 12.0 6.7 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit ERM PF00769.19 RKO84436.1 - 0.12 12.2 25.3 0.014 15.2 19.2 1.9 1 1 1 2 2 2 0 Ezrin/radixin/moesin family Ax_dynein_light PF10211.9 RKO84436.1 - 0.14 12.1 20.5 0.44 10.5 2.3 3.0 1 1 2 3 3 3 0 Axonemal dynein light chain Leu_zip PF15294.6 RKO84436.1 - 0.15 11.5 17.7 0.2 11.2 9.1 2.0 1 1 1 2 2 2 0 Leucine zipper CENP-H PF05837.12 RKO84436.1 - 0.16 12.4 21.0 0.44 11.0 10.6 2.1 1 1 1 2 2 2 0 Centromere protein H (CENP-H) TPR_MLP1_2 PF07926.12 RKO84436.1 - 0.22 11.6 18.6 0.089 12.8 12.8 2.5 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein GBP_C PF02841.14 RKO84436.1 - 0.51 9.7 15.1 0.61 9.4 15.1 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain DUF4164 PF13747.6 RKO84436.1 - 0.61 10.4 25.3 0.83 10.0 4.3 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4164) CENP-F_leu_zip PF10473.9 RKO84436.1 - 0.69 9.9 22.5 1.6 8.8 15.6 2.3 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 YabA PF06156.13 RKO84436.1 - 0.69 10.6 14.6 1.3 9.7 6.3 2.3 1 1 1 2 2 2 0 Initiation control protein YabA Muted PF14942.6 RKO84436.1 - 0.78 10.1 15.3 0.21 11.9 11.2 1.8 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein DUF4472 PF14739.6 RKO84436.1 - 1.1 10.0 14.3 0.94 10.2 7.2 2.7 1 1 0 2 2 2 0 Domain of unknown function (DUF4472) DUF724 PF05266.14 RKO84436.1 - 1.2 9.0 16.7 16 5.3 15.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF724) LMBR1 PF04791.16 RKO84436.1 - 1.3 7.9 4.6 1.6 7.6 4.6 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein UPF0242 PF06785.11 RKO84436.1 - 1.4 9.0 20.3 10 6.2 20.3 1.9 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ZapB PF06005.12 RKO84436.1 - 1.6 9.3 19.9 1 9.8 2.1 3.0 1 1 2 3 3 3 0 Cell division protein ZapB Fmp27_WPPW PF10359.9 RKO84436.1 - 2.3 7.0 12.5 3 6.6 12.4 1.3 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain DUF4407 PF14362.6 RKO84436.1 - 2.3 7.5 15.7 5.1 6.3 15.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) FUSC PF04632.12 RKO84436.1 - 2.4 6.6 3.0 2.5 6.5 3.0 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family Prefoldin_2 PF01920.20 RKO84436.1 - 2.8 7.9 18.1 2.4 8.2 2.7 3.4 1 1 1 3 3 3 0 Prefoldin subunit APG6_N PF17675.1 RKO84436.1 - 2.8 8.5 24.9 5.4e+03 -2.2 25.3 2.7 1 1 0 1 1 0 0 Apg6 coiled-coil region DUF3450 PF11932.8 RKO84436.1 - 3.1 7.0 17.1 5.7 6.2 10.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF883 PF05957.13 RKO84436.1 - 3.2 8.4 10.8 0.76 10.4 5.9 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) bZIP_2 PF07716.15 RKO84436.1 - 3.4 7.8 20.4 1.2 9.3 0.2 4.2 3 1 0 3 3 3 0 Basic region leucine zipper CpXC PF14353.6 RKO84436.1 - 4 7.5 7.2 7 6.7 0.1 2.2 1 1 1 2 2 2 0 CpXC protein KELK PF15796.5 RKO84436.1 - 4.2 7.9 19.4 4 7.9 9.4 2.3 1 1 1 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase HR1 PF02185.16 RKO84436.1 - 4.5 7.4 13.2 2.9 8.0 0.2 2.8 2 1 1 3 3 3 0 Hr1 repeat Fez1 PF06818.15 RKO84436.1 - 4.7 7.6 19.3 9.5 6.6 19.3 1.5 1 1 0 1 1 1 0 Fez1 FlaC_arch PF05377.11 RKO84436.1 - 5.9 7.4 11.1 15 6.0 2.3 3.5 2 2 1 3 3 3 0 Flagella accessory protein C (FlaC) OmpH PF03938.14 RKO84436.1 - 6 7.2 18.7 1.1 9.6 11.7 2.0 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) Spc24 PF08286.11 RKO84436.1 - 6.1 7.2 16.8 25 5.2 2.0 2.8 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 V_ATPase_I PF01496.19 RKO84436.1 - 7.9 4.3 8.6 10 3.8 8.6 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family TMPIT PF07851.13 RKO84436.1 - 8.2 5.6 10.0 2.1 7.5 5.9 1.7 1 1 1 2 2 2 0 TMPIT-like protein PRKG1_interact PF15898.5 RKO84436.1 - 8.4 7.4 21.5 6.7 7.7 12.4 2.4 1 1 0 2 2 2 0 cGMP-dependent protein kinase interacting domain S1-P1_nuclease PF02265.16 RKO84437.1 - 2e-32 113.0 0.0 6.6e-23 81.8 0.0 2.0 2 0 0 2 2 2 2 S1/P1 Nuclease CAMSAP_CH PF11971.8 RKO84437.1 - 0.17 11.7 0.0 0.31 10.9 0.0 1.3 1 0 0 1 1 1 0 CAMSAP CH domain AA_permease PF00324.21 RKO84438.1 - 7.2e-14 51.2 5.1 1.1e-13 50.6 5.1 1.2 1 0 0 1 1 1 1 Amino acid permease FtsX PF02687.21 RKO84438.1 - 0.12 12.9 6.0 0.26 11.8 0.6 2.2 1 1 1 2 2 2 0 FtsX-like permease family O-antigen_lig PF13425.6 RKO84438.1 - 0.43 9.3 2.1 0.57 8.9 2.1 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF4282 PF14110.6 RKO84438.1 - 0.76 10.6 8.3 0.12 13.1 3.6 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4282) Glyco_hydro_16 PF00722.21 RKO84439.1 - 2.9e-09 36.7 0.0 6.3e-09 35.6 0.0 1.5 1 1 0 1 1 1 1 Glycosyl hydrolases family 16 Helicase_C PF00271.31 RKO84440.1 - 3.4e-10 40.3 0.1 6.3e-10 39.4 0.1 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HLH PF00010.26 RKO84441.1 - 9.7e-18 63.9 1.9 1.7e-17 63.1 1.9 1.4 1 0 0 1 1 1 1 Helix-loop-helix DNA-binding domain YscO-like PF16789.5 RKO84441.1 - 0.022 14.8 0.8 0.03 14.3 0.8 1.1 1 0 0 1 1 1 0 YscO-like protein tRNA_lig_CPD PF08302.11 RKO84443.1 - 3.4e-11 43.1 0.3 2.5e-10 40.3 0.0 2.4 2 0 0 2 2 2 1 Fungal tRNA ligase phosphodiesterase domain DUF3670 PF12419.8 RKO84444.1 - 0.036 13.9 1.0 1.5 8.6 0.1 2.4 2 0 0 2 2 2 0 SNF2 Helicase protein DUF768 PF05589.11 RKO84444.1 - 0.07 13.1 0.4 8.4 6.5 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF768) Glyco_hydro_35 PF01301.19 RKO84449.1 - 3.5e-40 138.6 0.2 4e-40 138.4 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 35 Glyco_hydro_42 PF02449.15 RKO84449.1 - 1.1e-09 38.2 0.0 1.3e-09 37.9 0.0 1.1 1 0 0 1 1 1 1 Beta-galactosidase Cellulase PF00150.18 RKO84449.1 - 1.1e-05 25.1 0.0 1.1e-05 25.1 0.0 1.0 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) Ribosomal_L39 PF00832.20 RKO84449.1 - 0.013 15.2 0.2 0.024 14.3 0.2 1.4 1 0 0 1 1 1 0 Ribosomal L39 protein DUF1729 PF08354.10 RKO84453.1 - 1e-107 360.1 0.0 1.5e-107 359.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1729) SAT PF16073.5 RKO84453.1 - 4.2e-16 59.4 0.1 6.5e-16 58.8 0.1 1.2 1 0 0 1 1 1 1 Starter unit:ACP transacylase in aflatoxin biosynthesis NMO PF03060.15 RKO84453.1 - 0.022 14.2 0.0 0.4 10.0 0.1 2.3 2 1 0 2 2 2 0 Nitronate monooxygenase zf-RRN7 PF11781.8 RKO84455.1 - 7.8e-09 35.1 0.2 1.4e-08 34.2 0.2 1.5 1 0 0 1 1 1 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Apt1 PF10351.9 RKO84455.1 - 0.0076 15.2 1.0 0.009 14.9 1.0 1.1 1 0 0 1 1 1 1 Golgi-body localisation protein domain CDC45 PF02724.14 RKO84455.1 - 0.016 13.6 16.0 0.023 13.0 16.0 1.1 1 0 0 1 1 1 0 CDC45-like protein SDA1 PF05285.12 RKO84455.1 - 0.27 10.6 15.0 0.37 10.2 15.0 1.1 1 0 0 1 1 1 0 SDA1 Presenilin PF01080.17 RKO84455.1 - 0.53 9.0 1.2 0.7 8.6 1.2 1.2 1 0 0 1 1 1 0 Presenilin Rrn6 PF10214.9 RKO84455.1 - 1.1 7.6 11.5 2 6.8 11.5 1.3 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor YL1 PF05764.13 RKO84455.1 - 2 8.4 18.4 0.11 12.6 13.0 1.6 2 0 0 2 2 2 0 YL1 nuclear protein NOA36 PF06524.12 RKO84455.1 - 2.9 7.1 12.9 5.1 6.3 8.7 2.3 2 0 0 2 2 2 0 NOA36 protein Transformer PF06495.11 RKO84455.1 - 3 7.9 25.1 0.12 12.4 18.0 2.0 2 0 0 2 2 2 0 Fruit fly transformer protein Cwf_Cwc_15 PF04889.12 RKO84455.1 - 4.4 7.0 15.6 8.7 6.0 15.6 1.5 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Corona_nucleoca PF00937.18 RKO84455.1 - 4.7 6.1 13.5 8.3 5.3 13.5 1.3 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein Sporozoite_P67 PF05642.11 RKO84455.1 - 6.9 4.6 9.9 8.8 4.3 9.9 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DUF2267 PF10025.9 RKO84457.1 - 1.4 9.2 3.8 3.1 8.1 0.4 2.5 2 1 2 4 4 4 0 Uncharacterized conserved protein (DUF2267) TPR_1 PF00515.28 RKO84460.1 - 7.4e-08 31.9 8.1 0.0013 18.5 0.6 3.8 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 RKO84460.1 - 4.3e-06 26.4 6.5 0.0038 17.2 0.4 3.9 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO84460.1 - 0.0037 17.7 1.5 0.0037 17.7 1.5 3.2 3 1 1 4 4 4 1 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO84460.1 - 0.0041 17.3 4.9 0.0069 16.6 4.9 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 RKO84460.1 - 0.009 16.8 9.0 0.0097 16.7 0.3 4.3 4 1 2 6 6 6 1 Tetratricopeptide repeat TPR_8 PF13181.6 RKO84460.1 - 0.084 13.1 1.4 16 6.0 0.2 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat Glyco_hydro_15 PF00723.21 RKO84461.1 - 6.2e-18 64.8 0.2 8e-18 64.4 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 15 Trefoil PF00088.18 RKO84462.1 - 1.7e-10 40.6 7.7 2.3e-10 40.2 7.7 1.2 1 0 0 1 1 1 1 Trefoil (P-type) domain 7TM-7TMR_HD PF07698.11 RKO84465.1 - 0.11 12.2 1.9 0.14 11.9 1.9 1.1 1 0 0 1 1 1 0 7TM receptor with intracellular HD hydrolase tRNA-synt_1c PF00749.21 RKO84466.1 - 7.3e-26 90.8 0.0 8.9e-26 90.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain PB1 PF00564.24 RKO84467.1 - 5.2e-07 29.5 0.0 8.3e-07 28.9 0.0 1.3 1 0 0 1 1 1 1 PB1 domain Glyoxal_oxid_N PF07250.11 RKO84468.1 - 1.7e-33 115.8 0.0 1.4e-32 112.8 0.0 2.4 3 1 0 3 3 3 1 Glyoxal oxidase N-terminus Kelch_6 PF13964.6 RKO84468.1 - 1.3e-05 25.3 0.4 2.4 8.6 0.0 5.0 5 0 0 5 5 5 2 Kelch motif Kelch_4 PF13418.6 RKO84468.1 - 0.00027 20.9 0.1 0.061 13.3 0.0 3.9 5 0 0 5 5 5 1 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO84468.1 - 0.0063 16.5 0.0 0.28 11.2 0.0 2.9 3 0 0 3 3 3 1 Kelch motif Kelch_2 PF07646.15 RKO84468.1 - 0.033 14.2 0.2 5 7.3 0.0 3.8 4 0 0 4 4 4 0 Kelch motif 2OG-FeII_Oxy_3 PF13640.6 RKO84471.1 - 0.015 16.2 0.0 0.017 16.0 0.0 1.1 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Anticodon_1 PF08264.13 RKO84472.1 - 4.1e-16 59.3 0.8 9e-16 58.2 0.2 1.9 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 RKO84472.1 - 2.6e-10 39.6 0.0 4.4e-10 38.9 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 RKO84472.1 - 4.9e-09 35.0 0.0 8.5e-09 34.2 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 RKO84472.1 - 2e-08 34.0 0.0 3.6e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 RKO84472.1 - 0.0051 15.8 0.0 0.0099 14.8 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetases class I (K) Ank_2 PF12796.7 RKO84473.1 - 7.9e-13 48.8 0.0 5.1e-07 30.2 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) TIG PF01833.24 RKO84473.1 - 7.9e-12 45.1 0.8 1.4e-11 44.3 0.8 1.4 1 0 0 1 1 1 1 IPT/TIG domain Ank_4 PF13637.6 RKO84473.1 - 2.7e-11 43.7 0.2 2.3e-08 34.4 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO84473.1 - 1.6e-08 34.6 0.8 1e-06 28.9 0.0 3.5 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank PF00023.30 RKO84473.1 - 0.00044 20.6 0.6 4.8 7.8 0.0 3.5 3 0 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 RKO84473.1 - 0.00079 19.7 0.1 14 6.6 0.0 3.8 3 0 0 3 3 3 1 Ankyrin repeat COPI_C PF06957.11 RKO84473.1 - 0.32 9.7 5.0 0.47 9.2 5.0 1.1 1 0 0 1 1 1 0 Coatomer (COPI) alpha subunit C-terminus BUD22 PF09073.10 RKO84473.1 - 2.2 7.6 7.9 3.9 6.7 7.9 1.3 1 0 0 1 1 1 0 BUD22 Nop14 PF04147.12 RKO84473.1 - 3.4 5.8 7.5 4.8 5.3 7.5 1.1 1 0 0 1 1 1 0 Nop14-like family FYDLN_acid PF09538.10 RKO84473.1 - 8.1 7.2 10.0 20 5.9 10.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) ThiF PF00899.21 RKO84475.1 - 3.2e-21 75.8 0.0 4.1e-21 75.5 0.0 1.1 1 0 0 1 1 1 1 ThiF family E2_bind PF08825.10 RKO84475.1 - 1.7e-15 56.9 0.1 2.5e-15 56.4 0.1 1.2 1 0 0 1 1 1 1 E2 binding domain UBA_e1_thiolCys PF10585.9 RKO84475.1 - 0.062 13.2 0.6 3.8 7.3 0.0 2.2 1 1 1 2 2 2 0 Ubiquitin-activating enzyme active site DUF2353 PF09789.9 RKO84481.1 - 0.0018 17.7 9.1 0.019 14.3 5.7 2.1 1 1 1 2 2 2 1 Uncharacterized coiled-coil protein (DUF2353) FliJ PF02050.16 RKO84481.1 - 0.0026 18.0 5.1 0.005 17.1 5.1 1.5 1 0 0 1 1 1 1 Flagellar FliJ protein UPF0242 PF06785.11 RKO84481.1 - 0.0086 16.2 7.4 0.012 15.7 7.4 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus DUF16 PF01519.16 RKO84481.1 - 0.021 15.3 1.9 0.061 13.8 1.9 1.8 1 0 0 1 1 1 0 Protein of unknown function DUF16 DUF1192 PF06698.11 RKO84481.1 - 0.055 13.5 0.6 1.7 8.8 0.1 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) Fzo_mitofusin PF04799.13 RKO84481.1 - 0.073 12.6 1.9 0.12 11.9 1.9 1.4 1 0 0 1 1 1 0 fzo-like conserved region CENP-H PF05837.12 RKO84481.1 - 0.078 13.4 6.5 0.19 12.2 5.9 2.0 1 1 0 1 1 1 0 Centromere protein H (CENP-H) DUF1664 PF07889.12 RKO84481.1 - 0.08 13.0 2.3 0.19 11.8 2.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF489 PF04356.12 RKO84481.1 - 0.087 12.8 1.3 0.2 11.6 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF489) ADIP PF11559.8 RKO84481.1 - 0.092 12.8 8.2 0.035 14.2 5.5 1.7 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding YxiJ PF14176.6 RKO84481.1 - 0.098 13.2 0.2 0.29 11.6 0.1 1.8 2 0 0 2 2 2 0 YxiJ-like protein HIP1_clath_bdg PF16515.5 RKO84481.1 - 0.16 12.6 7.9 0.42 11.3 5.1 2.6 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF724 PF05266.14 RKO84481.1 - 0.19 11.6 4.0 0.43 10.4 4.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF724) SOGA PF11365.8 RKO84481.1 - 0.35 12.0 3.5 8.7 7.5 0.5 2.6 1 1 1 2 2 2 0 Protein SOGA YabA PF06156.13 RKO84481.1 - 0.42 11.3 4.3 0.94 10.2 3.3 2.1 1 1 1 2 2 2 0 Initiation control protein YabA Atg14 PF10186.9 RKO84481.1 - 0.42 9.7 9.8 0.09 11.8 6.3 1.6 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 TMPIT PF07851.13 RKO84481.1 - 0.44 9.8 2.9 0.74 9.0 2.9 1.3 1 0 0 1 1 1 0 TMPIT-like protein YlqD PF11068.8 RKO84481.1 - 0.83 10.0 6.7 0.2 12.1 2.8 1.9 2 0 0 2 2 2 0 YlqD protein FAM76 PF16046.5 RKO84481.1 - 1.5 8.2 7.0 1.9 7.8 7.0 1.2 1 0 0 1 1 1 0 FAM76 protein SlyX PF04102.12 RKO84481.1 - 1.5 9.5 6.0 1.9 9.2 3.3 2.6 2 1 1 3 3 3 0 SlyX DivIC PF04977.15 RKO84481.1 - 1.6 8.5 8.6 24 4.8 2.7 3.0 1 1 3 4 4 4 0 Septum formation initiator Cyt-b5 PF00173.28 RKO84482.1 - 5.1e-16 58.6 0.0 9.2e-16 57.8 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain FAD_binding_6 PF00970.24 RKO84482.1 - 1.4e-09 38.2 0.0 3.2e-09 37.1 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Cytochrom_B561 PF03188.16 RKO84482.1 - 3.6e-05 23.9 7.8 3.6e-05 23.9 7.8 1.6 2 0 0 2 2 2 1 Eukaryotic cytochrome b561 NAD_binding_1 PF00175.21 RKO84482.1 - 0.084 13.5 0.0 0.17 12.5 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase NAD-binding domain DUF2427 PF10348.9 RKO84482.1 - 2.3 8.0 6.7 1.3 8.9 2.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF2427) DUF4079 PF13301.6 RKO84482.1 - 3.1 7.9 6.9 39 4.4 6.9 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) Ni_hydr_CYTB PF01292.20 RKO84482.1 - 8.9 5.9 13.6 1.4e+03 -1.3 13.6 3.1 1 1 0 1 1 1 0 Prokaryotic cytochrome b561 EamA PF00892.20 RKO84484.1 - 2.4e-08 34.3 12.3 2.8e-08 34.0 12.3 1.1 1 0 0 1 1 1 1 EamA-like transporter family NTP_transferase PF00483.23 RKO84485.1 - 0.0014 18.3 0.0 0.0018 17.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase DUF719 PF05334.13 RKO84486.1 - 0.0089 16.2 0.3 0.0089 16.2 0.3 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF719) RAP1 PF07218.11 RKO84486.1 - 0.12 10.6 3.0 0.15 10.3 3.0 1.1 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) Connexin PF00029.19 RKO84486.1 - 1.6 8.4 4.9 3.4 7.4 4.9 1.4 1 0 0 1 1 1 0 Connexin FmiP_Thoc5 PF09766.9 RKO84486.1 - 4.3 6.5 9.5 6.9 5.9 0.1 2.0 2 0 0 2 2 2 0 Fms-interacting protein/Thoc5 MIF4G_like_2 PF09090.11 RKO84486.1 - 6.1 6.2 7.9 11 5.4 7.9 1.3 1 0 0 1 1 1 0 MIF4G like DDRGK PF09756.9 RKO84486.1 - 9.5 5.8 18.8 17 4.9 18.8 1.3 1 0 0 1 1 1 0 DDRGK domain IL1 PF00340.19 RKO84487.1 - 0.0014 18.3 0.0 0.026 14.2 0.0 2.2 2 0 0 2 2 2 1 Interleukin-1 / 18 Thioredoxin_3 PF13192.6 RKO84491.1 - 0.18 11.9 0.0 0.28 11.2 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin domain Pkinase PF00069.25 RKO84492.1 - 2.2e-06 27.2 0.0 3.7e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain DUF2408 PF10303.9 RKO84493.1 - 0.18 12.4 0.0 0.3 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) DUF1860 PF08949.10 RKO84494.1 - 0.044 13.5 0.3 0.044 13.5 0.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1860) Fib_alpha PF08702.10 RKO84495.1 - 0.0013 18.9 2.5 0.0057 16.8 0.4 2.8 3 0 0 3 3 3 1 Fibrinogen alpha/beta chain family Baculo_PEP_C PF04513.12 RKO84495.1 - 2 8.5 7.1 17 5.5 0.1 3.3 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Tropomyosin PF00261.20 RKO84495.1 - 7.9 5.8 50.7 0.43 9.9 22.9 3.3 1 1 0 2 2 2 0 Tropomyosin Inhibitor_I53 PF11714.8 RKO84496.1 - 0.083 13.1 0.5 0.083 13.1 0.5 3.9 2 2 2 4 4 4 0 Thrombin inhibitor Madanin BAH PF01426.18 RKO84497.1 - 0.0044 16.9 0.0 0.025 14.4 0.0 1.9 2 0 0 2 2 2 1 BAH domain RNA_pol_Rpb1_R PF05001.13 RKO84497.1 - 1.4 9.4 3.8 3.1 8.3 3.8 1.6 1 0 0 1 1 1 0 RNA polymerase Rpb1 C-terminal repeat DUF3361 PF11841.8 RKO84499.1 - 1.6e-24 86.6 0.2 2.9e-24 85.8 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3361) Gcd10p PF04189.13 RKO84499.1 - 0.11 11.6 0.0 0.2 10.8 0.0 1.3 1 0 0 1 1 1 0 Gcd10p family TMEM208_SND2 PF05620.11 RKO84499.1 - 0.16 11.8 0.1 0.25 11.1 0.1 1.3 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 RNA_pol_Rpb2_7 PF04560.20 RKO84500.1 - 1.3e-07 31.9 0.0 1.9e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_6 PF00562.28 RKO84500.1 - 0.0031 16.6 0.0 0.004 16.3 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 HSP20 PF00011.21 RKO84502.1 - 1.2e-18 67.1 0.1 1.3e-18 67.0 0.1 1.0 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 RKO84502.1 - 1.9e-09 37.0 0.0 3e-09 36.3 0.0 1.4 1 1 0 1 1 1 1 HSP20-like domain found in ArsA FKBP26_C PF18046.1 RKO84502.1 - 0.13 12.4 0.1 0.58 10.3 0.0 1.9 2 0 0 2 2 2 0 FKBP26_C-terminal ABC2_membrane PF01061.24 RKO84503.1 - 4.8e-41 140.5 21.0 4.8e-41 140.5 21.0 1.6 2 0 0 2 2 2 1 ABC-2 type transporter AAA_21 PF13304.6 RKO84503.1 - 0.021 14.7 0.0 0.034 14.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system ABC2_membrane_3 PF12698.7 RKO84503.1 - 0.066 12.3 29.2 0.19 10.8 29.2 1.7 1 1 0 1 1 1 0 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 RKO84503.1 - 1 8.6 19.2 3.1 7.0 19.2 1.7 1 1 0 1 1 1 0 ABC-2 family transporter protein Thioredoxin_12 PF18400.1 RKO84504.1 - 9e-18 64.8 0.0 1.2e-17 64.5 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin-like domain LRR_6 PF13516.6 RKO84505.1 - 1.3e-11 43.5 18.7 0.01 15.8 0.0 8.2 9 0 0 9 9 9 4 Leucine Rich repeat LRR_4 PF12799.7 RKO84505.1 - 3.6e-10 39.9 0.7 0.00012 22.4 0.0 5.3 4 1 3 7 7 7 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO84505.1 - 8.2e-07 28.7 4.2 0.00011 21.8 0.0 4.4 3 2 0 3 3 3 1 Leucine rich repeat LRR_1 PF00560.33 RKO84505.1 - 0.0016 18.7 6.6 2 9.3 0.0 5.7 7 1 0 7 7 7 2 Leucine Rich Repeat Peptidase_M50B PF13398.6 RKO84506.1 - 1.1e-42 146.0 11.3 1.2e-42 145.8 11.3 1.0 1 0 0 1 1 1 1 Peptidase M50B-like PGPGW PF09656.10 RKO84506.1 - 1.5 8.4 8.2 7.7 6.1 1.0 3.2 1 1 2 3 3 3 0 Putative transmembrane protein (PGPGW) ECH_1 PF00378.20 RKO84507.1 - 5.1e-53 180.0 0.0 6.5e-53 179.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 RKO84507.1 - 1.2e-36 126.9 0.2 1.4e-30 107.0 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase Reo_sigmaC PF04582.12 RKO84508.1 - 0.055 13.7 0.0 0.092 13.0 0.0 1.4 1 0 0 1 1 1 0 Reovirus sigma C capsid protein C-terminal domain Hexapep_2 PF14602.6 RKO84509.1 - 0.073 12.8 0.2 8.2 6.3 0.3 2.8 2 0 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase Cpn60_TCP1 PF00118.24 RKO84510.1 - 4.1e-30 104.9 0.0 4.5e-30 104.7 0.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF2828 PF11443.8 RKO84510.1 - 0.13 10.3 0.1 0.14 10.2 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF2828) RCC1 PF00415.18 RKO84511.1 - 1.1e-06 29.1 1.7 0.0074 16.9 0.1 2.6 2 1 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 RKO84511.1 - 0.00018 21.2 1.1 0.00018 21.2 1.1 1.6 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat Presenilin PF01080.17 RKO84511.1 - 1.2 7.8 2.6 1.3 7.7 2.6 1.1 1 0 0 1 1 1 0 Presenilin Vfa1 PF08432.10 RKO84511.1 - 1.3 9.3 9.0 1.8 8.8 9.0 1.2 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 SPATIAL PF15256.6 RKO84511.1 - 4 7.7 4.8 33 4.7 5.0 2.2 2 1 0 2 2 2 0 SPATIAL RR_TM4-6 PF06459.12 RKO84511.1 - 8 6.2 10.4 11 5.8 10.4 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CDC45 PF02724.14 RKO84511.1 - 8.9 4.5 5.9 11 4.2 5.9 1.1 1 0 0 1 1 1 0 CDC45-like protein DHHA1 PF02272.19 RKO84512.1 - 0.033 14.6 1.1 0.042 14.3 1.1 1.1 1 0 0 1 1 1 0 DHHA1 domain DHHA1 PF02272.19 RKO84513.1 - 5.3e-15 56.0 6.7 6e-15 55.9 6.7 1.0 1 0 0 1 1 1 1 DHHA1 domain Cyclin PF08613.11 RKO84515.1 - 1.2e-06 29.0 0.0 1.3e-06 28.9 0.0 1.0 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 RKO84515.1 - 0.0034 17.1 0.0 0.0036 17.0 0.0 1.0 1 0 0 1 1 1 1 Cyclin, N-terminal domain ATP-synt_ab PF00006.25 RKO84516.1 - 5.7e-62 209.1 0.0 9.5e-62 208.4 0.0 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 RKO84516.1 - 1.7e-24 86.1 1.2 3.5e-24 85.1 1.2 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain NB-ARC PF00931.22 RKO84516.1 - 0.02 14.1 1.0 0.029 13.6 0.1 1.6 2 0 0 2 2 2 0 NB-ARC domain AAA_16 PF13191.6 RKO84516.1 - 0.041 14.3 0.1 0.11 12.8 0.1 1.8 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 RKO84516.1 - 0.045 13.7 0.1 0.12 12.3 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase AAA_19 PF13245.6 RKO84516.1 - 0.061 13.6 1.1 0.26 11.6 0.3 2.1 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 RKO84516.1 - 0.064 13.1 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Med2 PF11214.8 RKO84516.1 - 0.069 13.3 0.1 0.25 11.5 0.0 1.8 1 1 0 1 1 1 0 Mediator complex subunit 2 AAA PF00004.29 RKO84516.1 - 0.11 13.0 0.0 1.2 9.6 0.0 2.5 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 RKO84516.1 - 0.16 12.4 0.1 0.5 10.8 0.0 1.9 2 0 0 2 2 2 0 RNA helicase ATPase PF06745.13 RKO84516.1 - 0.22 10.9 1.4 0.55 9.5 0.6 1.9 2 0 0 2 2 2 0 KaiC Cnd3 PF12719.7 RKO84518.1 - 2.2e-36 125.5 1.8 2.7e-36 125.3 1.8 1.0 1 0 0 1 1 1 1 Nuclear condensing complex subunits, C-term domain NAD_binding_6 PF08030.12 RKO84521.1 - 1.1e-11 45.1 0.0 2.4e-11 44.0 0.0 1.6 1 1 0 1 1 1 1 Ferric reductase NAD binding domain FAD_binding_8 PF08022.12 RKO84521.1 - 8.5e-10 38.7 0.0 1.6e-09 37.8 0.0 1.4 1 0 0 1 1 1 1 FAD-binding domain Troponin-I_N PF11636.8 RKO84521.1 - 0.15 12.0 5.8 0.31 11.0 5.8 1.5 1 0 0 1 1 1 0 Troponin I residues 1-32 Proteasom_PSMB PF10508.9 RKO84522.1 - 5.7e-39 134.0 0.0 1.5e-38 132.6 0.0 1.6 2 0 0 2 2 2 1 Proteasome non-ATPase 26S subunit HEAT PF02985.22 RKO84522.1 - 0.00059 19.9 2.0 1.5 9.3 0.0 4.3 4 0 0 4 4 4 2 HEAT repeat RICTOR_V PF14668.6 RKO84522.1 - 0.0018 18.5 0.0 0.1 12.9 0.0 3.0 2 0 0 2 2 2 1 Rapamycin-insensitive companion of mTOR, domain 5 Arm PF00514.23 RKO84522.1 - 0.0078 16.2 1.1 0.06 13.4 0.0 3.1 3 0 0 3 3 3 1 Armadillo/beta-catenin-like repeat TTRAP PF14203.6 RKO84522.1 - 0.059 13.4 0.0 6 6.9 0.0 2.7 2 0 0 2 2 2 0 Putative tranposon-transfer assisting protein HEAT_EZ PF13513.6 RKO84522.1 - 0.077 13.5 6.3 9.8 6.8 0.1 5.0 4 1 0 4 4 4 0 HEAT-like repeat tRNA_bind_3 PF17176.4 RKO84522.1 - 0.13 12.6 0.0 0.31 11.3 0.0 1.6 1 0 0 1 1 1 0 tRNA-binding domain ATG16 PF08614.11 RKO84524.1 - 0.12 12.5 0.4 0.28 11.4 0.1 1.6 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Baculo_PEP_C PF04513.12 RKO84524.1 - 0.79 9.8 10.2 4 7.5 1.5 2.2 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus C2 PF00168.30 RKO84525.1 - 7.5e-19 67.9 0.0 1.7e-15 57.1 0.0 2.5 2 0 0 2 2 2 2 C2 domain zf-TFIIB PF13453.6 RKO84525.1 - 0.16 11.3 0.0 0.36 10.2 0.0 1.6 1 0 0 1 1 1 0 Transcription factor zinc-finger RRM_1 PF00076.22 RKO84526.1 - 6.1e-23 80.4 0.0 1.2e-22 79.5 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CSTF2_hinge PF14327.6 RKO84526.1 - 5.3e-22 78.1 3.1 5.3e-22 78.1 3.1 1.6 2 0 0 2 2 2 1 Hinge domain of cleavage stimulation factor subunit 2 RRM_7 PF16367.5 RKO84526.1 - 0.0002 21.4 0.0 0.00069 19.7 0.0 2.0 1 1 0 1 1 1 1 RNA recognition motif Spo7_2_N PF15407.6 RKO84526.1 - 0.065 12.9 0.0 0.18 11.5 0.0 1.7 2 0 0 2 2 2 0 Sporulation protein family 7 DRY_EERY PF09750.9 RKO84527.1 - 1e-25 90.6 0.0 1.9e-25 89.7 0.0 1.5 1 0 0 1 1 1 1 Alternative splicing regulator Prefoldin_2 PF01920.20 RKO84528.1 - 2.2e-05 24.4 0.1 3e-05 23.9 0.1 1.2 1 0 0 1 1 1 1 Prefoldin subunit K_channel_TID PF07941.11 RKO84529.1 - 4.4 7.8 22.2 3.8 8.0 0.6 3.4 3 0 0 3 3 3 0 Potassium channel Kv1.4 tandem inactivation domain Ephrin_rec_like PF07699.13 RKO84530.1 - 1.9e-07 30.7 6.3 5.3e-07 29.3 6.3 1.8 1 0 0 1 1 1 1 Putative ephrin-receptor like VSP PF03302.13 RKO84530.1 - 0.012 14.5 4.6 0.024 13.5 4.6 1.4 1 0 0 1 1 1 0 Giardia variant-specific surface protein NCD3G PF07562.14 RKO84530.1 - 0.062 13.3 5.0 0.24 11.4 5.0 1.9 1 1 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR TNFR_c6 PF00020.18 RKO84530.1 - 0.28 11.6 4.0 1.9 9.0 0.3 2.6 1 1 2 3 3 3 0 TNFR/NGFR cysteine-rich region MTBP_C PF14920.6 RKO84531.1 - 0.097 12.4 1.0 0.15 11.8 1.0 1.2 1 0 0 1 1 1 0 MDM2-binding CBM_19 PF03427.13 RKO84531.1 - 4 7.5 18.2 37 4.4 18.2 2.4 1 1 0 1 1 1 0 Carbohydrate binding domain (family 19) MFS_2 PF13347.6 RKO84532.1 - 4.3e-09 35.4 6.8 5.4e-09 35.1 6.8 1.1 1 0 0 1 1 1 1 MFS/sugar transport protein Chalcone PF02431.15 RKO84532.1 - 0.092 12.1 0.1 0.15 11.5 0.1 1.4 1 0 0 1 1 1 0 Chalcone-flavanone isomerase Methyltransf_7 PF03492.15 RKO84533.1 - 2.6e-24 86.1 0.0 3.5e-24 85.6 0.0 1.0 1 0 0 1 1 1 1 SAM dependent carboxyl methyltransferase NOT2_3_5 PF04153.18 RKO84534.1 - 1e-38 132.4 14.8 1.1e-38 132.3 14.8 1.0 1 0 0 1 1 1 1 NOT2 / NOT3 / NOT5 family DUF2373 PF10180.9 RKO84534.1 - 0.0068 16.2 3.1 0.01 15.7 3.1 1.4 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2373) RRM_1 PF00076.22 RKO84535.1 - 2.3e-43 145.9 0.1 1.2e-19 69.9 0.0 3.2 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RBM39linker PF15519.6 RKO84535.1 - 6.5e-12 46.4 0.5 4.8e-10 40.4 0.5 2.7 1 1 0 1 1 1 1 linker between RRM2 and RRM3 domains in RBM39 protein RRM_occluded PF16842.5 RKO84535.1 - 0.025 14.4 0.0 4.3 7.3 0.0 3.2 3 0 0 3 3 3 0 Occluded RNA-recognition motif RRM_5 PF13893.6 RKO84535.1 - 0.041 13.5 0.0 8.7 6.0 0.0 2.6 2 1 1 3 3 3 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 RKO84535.1 - 0.077 13.0 0.0 7.5 6.6 0.0 2.7 3 0 0 3 3 3 0 Nup53/35/40-type RNA recognition motif RRM_3 PF08777.11 RKO84535.1 - 0.079 13.0 0.0 0.46 10.6 0.0 2.2 2 0 0 2 2 2 0 RNA binding motif RSRP PF17069.5 RKO84535.1 - 0.28 10.7 50.4 0.4 10.2 50.4 1.1 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 Thr_synth_N PF14821.6 RKO84537.1 - 1.3e-23 83.0 0.0 3.8e-23 81.5 0.0 1.9 1 0 0 1 1 1 1 Threonine synthase N terminus SET PF00856.28 RKO84538.1 - 3e-07 31.0 0.0 8.1e-07 29.6 0.0 1.8 1 1 0 1 1 1 1 SET domain Peptidase_M14 PF00246.24 RKO84539.1 - 9.6e-13 48.6 0.0 1.5e-12 47.9 0.0 1.3 1 0 0 1 1 1 1 Zinc carboxypeptidase Propep_M14 PF02244.16 RKO84539.1 - 3.1e-06 27.5 0.1 5.1e-06 26.8 0.1 1.4 1 0 0 1 1 1 1 Carboxypeptidase activation peptide PCI PF01399.27 RKO84540.1 - 3.5e-15 56.4 0.0 5.7e-15 55.7 0.0 1.3 1 0 0 1 1 1 1 PCI domain WXG100 PF06013.12 RKO84541.1 - 0.12 12.7 0.4 0.51 10.6 0.4 2.1 2 0 0 2 2 2 0 Proteins of 100 residues with WXG ApoLp-III PF07464.11 RKO84542.1 - 0.027 14.6 0.3 0.035 14.2 0.3 1.1 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) UPF0242 PF06785.11 RKO84542.1 - 0.033 14.3 1.1 0.038 14.1 1.1 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4407 PF14362.6 RKO84542.1 - 0.035 13.5 2.0 0.048 13.0 2.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DLP_helical PF18709.1 RKO84542.1 - 0.05 12.8 0.7 0.059 12.6 0.7 1.1 1 0 0 1 1 1 0 Dynamin-like helical domain DUF3958 PF13125.6 RKO84542.1 - 0.08 13.1 6.1 0.086 13.0 5.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3958) Dynamin_N PF00350.23 RKO84543.1 - 3.9e-10 40.0 0.1 7.7e-10 39.1 0.1 1.5 1 0 0 1 1 1 1 Dynamin family Dynamin_M PF01031.20 RKO84543.1 - 0.00068 18.9 0.0 0.0011 18.2 0.0 1.4 1 0 0 1 1 1 1 Dynamin central region GED PF02212.18 RKO84543.1 - 0.028 14.5 0.0 0.055 13.6 0.0 1.5 1 0 0 1 1 1 0 Dynamin GTPase effector domain Peptidase_M16 PF00675.20 RKO84544.1 - 8.5e-10 38.8 0.0 9e-10 38.7 0.0 1.0 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Ank_2 PF12796.7 RKO84545.1 - 8.2e-26 90.4 0.8 7e-13 49.0 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 RKO84545.1 - 3.7e-23 80.9 9.1 3.3e-05 24.1 0.1 4.1 4 0 0 4 4 4 4 Ankyrin repeat Ank_3 PF13606.6 RKO84545.1 - 4.1e-21 72.8 3.5 0.00012 22.2 0.0 4.1 4 0 0 4 4 4 4 Ankyrin repeat Ank_5 PF13857.6 RKO84545.1 - 9.7e-21 73.6 9.9 1.5e-09 37.9 0.1 4.0 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO84545.1 - 1.5e-17 63.7 1.5 1.1e-08 35.4 0.1 3.4 3 1 1 4 4 4 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO84546.1 - 6.5e-19 68.0 6.3 3.7e-08 33.7 0.4 3.0 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO84546.1 - 1.2e-17 62.1 3.0 2.6e-05 24.3 0.1 3.2 3 0 0 3 3 3 3 Ankyrin repeat Ank_2 PF12796.7 RKO84546.1 - 6.5e-17 61.9 1.2 8.6e-16 58.3 1.4 2.1 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 RKO84546.1 - 7.3e-17 61.0 4.2 4.9e-05 23.6 0.3 3.2 3 0 0 3 3 3 3 Ankyrin repeat Ank_5 PF13857.6 RKO84546.1 - 1.8e-14 53.6 6.5 1.2e-07 31.9 0.8 2.8 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Chromo_shadow PF01393.19 RKO84547.1 - 4.4e-19 68.3 0.0 5.7e-19 68.0 0.0 1.2 1 0 0 1 1 1 1 Chromo shadow domain DMT_YdcZ PF04657.13 RKO84548.1 - 1.1e-47 161.8 29.6 3.6e-31 108.3 15.0 2.1 2 0 0 2 2 2 2 Putative inner membrane exporter, YdcZ sCache_3_2 PF17203.4 RKO84548.1 - 0.12 12.6 0.2 0.3 11.2 0.2 1.7 1 0 0 1 1 1 0 Single cache domain 3 PWI PF01480.17 RKO84549.1 - 1.6e-10 41.1 0.1 2.9e-10 40.3 0.1 1.4 1 0 0 1 1 1 1 PWI domain RRM_1 PF00076.22 RKO84549.1 - 0.0026 17.5 0.0 0.012 15.4 0.0 2.0 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Polysacc_deac_1 PF01522.21 RKO84551.1 - 5.8e-18 65.0 0.1 7.7e-18 64.6 0.1 1.2 1 0 0 1 1 1 1 Polysaccharide deacetylase Helicase_C PF00271.31 RKO84552.1 - 9.8e-11 42.0 0.0 2.5e-10 40.7 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SNF2_N PF00176.23 RKO84552.1 - 2.7e-05 23.0 0.0 3.7e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain TMCO5 PF14992.6 RKO84556.1 - 0.0096 15.5 0.3 0.023 14.3 0.3 1.6 1 0 0 1 1 1 1 TMCO5 family Exonuc_VII_L PF02601.15 RKO84556.1 - 0.016 14.8 7.8 0.82 9.2 8.7 2.8 2 1 0 2 2 2 0 Exonuclease VII, large subunit CCDC32 PF14989.6 RKO84556.1 - 0.16 11.9 2.0 1.8 8.6 0.0 2.7 3 0 0 3 3 3 0 Coiled-coil domain containing 32 Snapin_Pallidin PF14712.6 RKO84556.1 - 0.42 11.1 10.9 14 6.2 0.7 5.5 6 1 1 7 7 7 0 Snapin/Pallidin Syntaxin-6_N PF09177.11 RKO84556.1 - 0.49 11.0 6.0 29 5.3 0.0 3.9 3 1 1 4 4 4 0 Syntaxin 6, N-terminal DUF1515 PF07439.11 RKO84556.1 - 0.67 10.0 2.9 0.78 9.8 0.3 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1515) DUF3037 PF11236.8 RKO84556.1 - 0.79 10.2 2.8 29 5.1 0.2 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF3037) Lebercilin PF15619.6 RKO84556.1 - 2.5 7.7 13.1 1 9.0 2.5 3.7 3 1 0 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease Fib_alpha PF08702.10 RKO84556.1 - 3.8 7.7 5.1 73 3.5 0.0 3.6 4 1 1 5 5 5 0 Fibrinogen alpha/beta chain family RasGEF PF00617.19 RKO84558.1 - 5.2e-60 202.7 0.0 8.3e-60 202.0 0.0 1.3 1 0 0 1 1 1 1 RasGEF domain RasGEF_N PF00618.20 RKO84558.1 - 4.1e-06 27.0 0.1 8.5e-06 26.0 0.1 1.5 1 0 0 1 1 1 1 RasGEF N-terminal motif Asp PF00026.23 RKO84560.1 - 2.8e-66 224.1 0.0 3.6e-66 223.7 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO84560.1 - 1.4e-11 44.9 4.0 4e-09 37.0 1.6 3.3 2 1 0 2 2 2 1 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 RKO84560.1 - 0.00071 20.2 0.2 0.5 11.0 0.0 2.9 2 1 0 2 2 2 2 Aspartyl protease gag-asp_proteas PF13975.6 RKO84560.1 - 0.076 13.6 0.2 6.4 7.4 0.0 3.0 3 0 0 3 3 3 0 gag-polyprotein putative aspartyl protease ABC2_membrane PF01061.24 RKO84561.1 - 0.13 11.7 9.5 0.032 13.6 6.6 1.4 2 0 0 2 2 2 0 ABC-2 type transporter GATA PF00320.27 RKO84562.1 - 5.2e-11 42.0 3.0 8.6e-11 41.3 3.0 1.4 1 0 0 1 1 1 1 GATA zinc finger ArfGap PF01412.18 RKO84562.1 - 0.026 14.6 0.5 0.037 14.1 0.5 1.3 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf Mito_carr PF00153.27 RKO84563.1 - 2.1e-20 72.5 0.0 2.3e-20 72.3 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial carrier protein BAR_3_WASP_bdg PF10456.9 RKO84563.1 - 0.067 12.7 0.0 0.077 12.4 0.0 1.1 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein WD40 PF00400.32 RKO84564.1 - 0.0042 17.9 0.1 0.96 10.4 0.0 3.1 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO84565.1 - 0.0014 18.9 0.0 0.054 13.8 0.0 2.4 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 RKO84565.1 - 0.0057 17.5 0.1 0.026 15.4 0.0 2.1 2 0 0 2 2 2 1 WD domain, G-beta repeat LGFP PF08310.11 RKO84565.1 - 0.1 13.1 0.0 14 6.3 0.0 2.5 2 0 0 2 2 2 0 LGFP repeat Ion_trans_2 PF07885.16 RKO84566.1 - 8.8e-13 48.0 11.5 1.3e-12 47.5 11.5 1.2 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 RKO84566.1 - 0.0084 15.4 0.7 0.011 15.0 0.7 1.2 1 0 0 1 1 1 1 Ion transport protein WD40 PF00400.32 RKO84567.1 - 4.8e-18 65.2 13.7 0.00034 21.4 0.6 5.6 5 0 0 5 5 5 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO84567.1 - 2.5e-07 30.9 4.3 0.006 16.9 0.2 4.0 1 1 3 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain LRR_6 PF13516.6 RKO84568.1 - 0.034 14.2 0.0 0.18 12.0 0.0 2.3 2 0 0 2 2 2 0 Leucine Rich repeat ATP-synt_C PF00137.21 RKO84569.1 - 2.3e-34 117.5 34.7 1e-21 77.0 14.3 2.4 2 0 0 2 2 2 2 ATP synthase subunit C SCP2 PF02036.17 RKO84570.1 - 2.8e-06 27.8 0.0 4.9e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 SCP-2 sterol transfer family L1R_F9L PF02442.17 RKO84571.1 - 3.2e-06 27.2 25.5 3.9e-06 26.9 25.5 1.1 1 0 0 1 1 1 1 Lipid membrane protein of large eukaryotic DNA viruses Phage_int_SAM_6 PF18644.1 RKO84571.1 - 0.095 12.7 1.2 0.15 12.1 1.2 1.3 1 0 0 1 1 1 0 Phage integrase SAM-like domain Vps52 PF04129.12 RKO84574.1 - 1.2e-105 354.3 3.6 1.4e-105 354.0 3.6 1.1 1 0 0 1 1 1 1 Vps52 / Sac2 family COG6 PF06419.11 RKO84574.1 - 0.00053 18.3 0.8 0.00082 17.7 0.8 1.2 1 0 0 1 1 1 1 Conserved oligomeric complex COG6 LSM PF01423.22 RKO84575.1 - 1.3e-17 63.2 0.1 1.5e-17 63.1 0.1 1.0 1 0 0 1 1 1 1 LSM domain Epimerase PF01370.21 RKO84576.1 - 1.7e-50 171.7 0.0 1.9e-50 171.6 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 RKO84576.1 - 5.2e-43 147.7 0.0 6.1e-43 147.5 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 RKO84576.1 - 2.5e-14 53.1 0.0 6.5e-13 48.5 0.0 2.6 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 RKO84576.1 - 8.5e-13 47.9 0.0 1.8e-12 46.8 0.0 1.5 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 RKO84576.1 - 1.3e-12 47.4 0.0 1.6e-12 47.2 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.6 RKO84576.1 - 6.5e-07 29.4 0.0 8.2e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 RKO84576.1 - 5.6e-06 25.7 0.0 0.00038 19.7 0.0 2.5 2 1 0 2 2 2 1 Male sterility protein KR PF08659.10 RKO84576.1 - 0.00034 20.6 0.2 0.023 14.6 0.2 2.3 1 1 0 1 1 1 1 KR domain NmrA PF05368.13 RKO84576.1 - 0.0072 15.9 0.0 0.011 15.3 0.0 1.4 1 1 0 1 1 1 1 NmrA-like family TrkA_N PF02254.18 RKO84576.1 - 0.12 12.7 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 TrkA-N domain TPR_12 PF13424.6 RKO84578.1 - 2.5e-07 30.9 0.3 2.5e-07 30.9 0.3 1.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 RKO84578.1 - 3.7e-07 29.8 0.8 0.023 14.6 0.0 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 RKO84578.1 - 0.046 13.8 0.1 18 5.8 0.0 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat BAH PF01426.18 RKO84579.1 - 2.2e-05 24.3 0.0 2.6e-05 24.1 0.0 1.0 1 0 0 1 1 1 1 BAH domain DDT PF02791.17 RKO84580.1 - 5.5e-07 29.8 0.5 8.5e-07 29.2 0.5 1.2 1 0 0 1 1 1 1 DDT domain F-box-like PF12937.7 RKO84584.1 - 0.00039 20.3 4.0 0.0004 20.2 0.1 2.9 3 0 0 3 3 3 1 F-box-like HSP70 PF00012.20 RKO84584.1 - 0.09 10.9 0.1 0.13 10.4 0.1 1.1 1 0 0 1 1 1 0 Hsp70 protein F-box PF00646.33 RKO84584.1 - 0.4 10.6 2.9 24 4.9 0.2 3.4 2 1 0 2 2 2 0 F-box domain DUF4246 PF14033.6 RKO84589.1 - 1.8e-22 80.1 0.0 5.5e-12 45.5 0.0 2.9 1 1 1 2 2 2 2 Protein of unknown function (DUF4246) CK_II_beta PF01214.18 RKO84590.1 - 4.9e-33 114.5 0.0 6.3e-33 114.1 0.0 1.1 1 0 0 1 1 1 1 Casein kinase II regulatory subunit E1-E2_ATPase PF00122.20 RKO84592.1 - 2.3e-48 164.1 0.1 4.2e-48 163.2 0.1 1.5 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 RKO84592.1 - 6.8e-18 65.7 2.5 5.9e-15 56.1 2.5 3.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 RKO84592.1 - 7.9e-17 61.1 0.0 1.7e-16 60.0 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_C PF00689.21 RKO84592.1 - 1.8e-06 27.8 1.9 6.6e-06 25.9 0.1 2.2 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase_3 PF08282.12 RKO84592.1 - 8.7e-06 25.7 0.4 0.0059 16.4 0.3 2.5 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 RKO84592.1 - 0.014 15.8 0.2 0.095 13.1 0.2 2.1 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase ILEI PF15711.5 RKO84593.1 - 1.5e-24 86.3 0.0 4.3e-24 84.8 0.0 1.7 2 0 0 2 2 2 1 Interleukin-like EMT inducer RRM_1 PF00076.22 RKO84594.1 - 3.9e-41 138.7 0.1 9e-16 57.5 0.0 3.3 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 RKO84594.1 - 8.5e-05 22.3 0.0 0.6 10.0 0.0 2.5 2 0 0 2 2 2 2 Occluded RNA-recognition motif Calpain_III PF01067.22 RKO84595.1 - 2.8e-08 34.1 0.0 0.0094 16.2 0.0 3.1 3 0 0 3 3 3 3 Calpain large subunit, domain III AF-4 PF05110.13 RKO84598.1 - 1.6 6.8 10.8 2.1 6.4 10.8 1.2 1 0 0 1 1 1 0 AF-4 proto-oncoprotein DUF1115 PF06544.12 RKO84601.1 - 0.1 12.7 1.7 1 9.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1115) 4HBT_3 PF13622.6 RKO84602.1 - 1.8e-16 61.2 0.4 2.2e-16 60.9 0.4 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily TPX2_importin PF12214.8 RKO84603.1 - 2.8e-17 63.4 8.1 1.1e-10 42.0 3.8 5.5 3 2 3 6 6 6 4 Cell cycle regulated microtubule associated protein TPX2 PF06886.11 RKO84603.1 - 8.7e-10 38.7 19.4 8.7e-10 38.7 19.4 4.1 4 0 0 4 4 4 1 Targeting protein for Xklp2 (TPX2) Dynactin_p62 PF05502.13 RKO84603.1 - 0.021 13.6 0.5 0.036 12.8 0.5 1.2 1 0 0 1 1 1 0 Dynactin p62 family Chloroplast_duf PF14476.6 RKO84603.1 - 0.23 10.4 1.2 0.34 9.8 1.2 1.2 1 0 0 1 1 1 0 Petal formation-expressed PSRP-3_Ycf65 PF04839.13 RKO84604.1 - 0.031 14.5 0.1 0.055 13.7 0.1 1.4 1 0 0 1 1 1 0 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) Ribosomal_S17 PF00366.20 RKO84608.1 - 7.7e-27 93.2 0.6 1.5e-26 92.3 0.6 1.5 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 RKO84608.1 - 1.5e-22 79.7 0.2 3.5e-22 78.6 0.2 1.6 1 0 0 1 1 1 1 Ribosomal_S17 N-terminal Ribosomal_S13 PF00416.22 RKO84609.1 - 7.9e-56 187.9 4.3 9.3e-56 187.7 4.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S13/S18 FbpA PF05833.11 RKO84609.1 - 0.029 13.1 0.0 0.032 13.0 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) PP28 PF10252.9 RKO84609.1 - 0.074 13.5 0.5 0.15 12.5 0.5 1.5 1 0 0 1 1 1 0 Casein kinase substrate phosphoprotein PP28 DUF2423 PF10338.9 RKO84610.1 - 7.1e-15 55.0 5.2 7.1e-15 55.0 5.2 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2423) Laps PF10169.9 RKO84610.1 - 0.022 15.3 1.3 0.022 15.3 1.3 1.9 2 0 0 2 2 2 0 Learning-associated protein TPR_12 PF13424.6 RKO84611.1 - 4.3e-10 39.8 15.3 0.0025 18.1 0.9 4.9 4 1 1 5 5 5 4 Tetratricopeptide repeat TPR_2 PF07719.17 RKO84611.1 - 0.00035 20.5 11.0 1.3 9.3 0.1 5.9 6 0 0 6 6 6 2 Tetratricopeptide repeat Retinal PF15449.6 RKO84611.1 - 0.077 10.8 22.2 0.1 10.4 22.2 1.2 1 0 0 1 1 1 0 Retinal protein ANAPC3 PF12895.7 RKO84611.1 - 0.14 12.4 0.4 6.2 7.1 0.1 2.6 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 RKO84611.1 - 7.5 7.7 17.5 9.1 7.4 1.1 5.9 6 0 0 6 6 6 0 Tetratricopeptide repeat Asp PF00026.23 RKO84614.1 - 1.6e-11 44.2 3.5 2e-11 43.9 3.5 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO84614.1 - 0.00014 22.1 1.9 0.0011 19.3 0.2 2.1 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal HEM4 PF02602.15 RKO84618.1 - 2.3e-34 118.8 0.0 2.5e-34 118.6 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD zf-C2H2_6 PF13912.6 RKO84619.1 - 9.1e-10 38.3 9.2 2.6e-07 30.4 0.2 2.1 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO84619.1 - 9.6e-10 38.5 12.2 5.2e-07 29.8 3.2 3.0 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2 PF00096.26 RKO84619.1 - 1.2e-07 31.8 15.7 0.00011 22.4 1.9 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO84619.1 - 1.4e-05 25.6 14.3 0.00028 21.4 1.7 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-met PF12874.7 RKO84619.1 - 0.00015 22.0 0.6 0.12 12.7 0.0 2.2 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 RKO84619.1 - 0.0012 19.1 0.1 0.025 14.8 0.0 2.1 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2HC_2 PF13913.6 RKO84619.1 - 0.01 15.7 9.1 0.014 15.2 0.6 2.2 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-C2H2_2 PF12756.7 RKO84619.1 - 0.041 14.2 3.2 1 9.8 0.1 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-C2HE PF16278.5 RKO84619.1 - 0.1 13.0 0.1 0.1 13.0 0.1 2.1 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf_C2H2_ZHX PF18387.1 RKO84619.1 - 0.13 11.9 5.5 2.8 7.7 0.8 2.1 1 1 1 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain zf-C4 PF00105.18 RKO84619.1 - 0.19 12.2 3.4 0.73 10.3 3.5 1.8 1 1 0 1 1 1 0 Zinc finger, C4 type (two domains) DUF530 PF04409.12 RKO84619.1 - 0.4 9.0 1.2 0.43 8.9 1.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF530) PIN_4 PF13638.6 RKO84621.1 - 2.1e-19 70.1 0.0 3.2e-19 69.5 0.0 1.3 1 0 0 1 1 1 1 PIN domain PIN_9 PF18477.1 RKO84621.1 - 0.066 13.5 0.1 4.6 7.6 0.1 2.7 2 1 0 2 2 2 0 PIN like domain DUF1102 PF06510.11 RKO84622.1 - 0.093 12.9 0.3 29 4.8 0.0 3.1 2 1 0 3 3 3 0 Protein of unknown function (DUF1102) Agarase_CBM PF17992.1 RKO84622.1 - 0.3 10.6 6.1 3.3 7.2 0.9 3.7 2 1 2 4 4 4 0 Agarase CBM like domain RtcR PF06956.11 RKO84622.1 - 0.44 10.0 1.7 25 4.2 0.0 3.4 1 1 2 4 4 4 0 Regulator of RNA terminal phosphate cyclase DUF3040 PF11239.8 RKO84623.1 - 0.13 12.5 0.1 0.21 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) Peptidase_S10 PF00450.22 RKO84627.1 - 5.4e-26 91.9 1.1 7.5e-26 91.5 1.1 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase WD40 PF00400.32 RKO84629.1 - 3.1e-57 189.2 23.5 2e-10 41.1 0.1 6.5 6 0 0 6 6 6 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO84629.1 - 3.3e-23 81.8 0.4 8.5e-05 22.8 0.0 5.9 1 1 4 5 5 5 5 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO84629.1 - 1.8e-15 56.6 4.1 0.00026 19.8 0.0 4.6 1 1 4 5 5 5 4 Nucleoporin Nup120/160 eIF2A PF08662.11 RKO84629.1 - 1.2e-14 54.7 0.1 2.9e-08 33.8 0.0 3.7 2 1 2 4 4 4 2 Eukaryotic translation initiation factor eIF2A WD40_like PF17005.5 RKO84629.1 - 3.4e-07 29.9 0.1 0.00026 20.4 0.0 3.1 1 1 2 3 3 3 3 WD40-like domain Ge1_WD40 PF16529.5 RKO84629.1 - 3.5e-07 29.5 1.9 0.11 11.4 0.4 3.9 1 1 2 3 3 3 3 WD40 region of Ge1, enhancer of mRNA-decapping protein PALB2_WD40 PF16756.5 RKO84629.1 - 0.00014 20.9 1.3 0.25 10.2 0.0 4.0 2 1 4 6 6 6 1 Partner and localizer of BRCA2 WD40 domain Frtz PF11768.8 RKO84629.1 - 0.00046 18.6 0.0 0.003 16.0 0.0 1.8 1 1 1 2 2 2 1 WD repeat-containing and planar cell polarity effector protein Fritz PD40 PF07676.12 RKO84629.1 - 0.00086 19.2 2.4 1.6 8.8 0.2 3.7 3 0 0 3 3 3 1 WD40-like Beta Propeller Repeat VID27 PF08553.10 RKO84629.1 - 0.0017 17.5 0.0 0.029 13.4 0.0 2.4 1 1 1 3 3 3 2 VID27 C-terminal WD40-like domain Coatomer_WDAD PF04053.14 RKO84629.1 - 0.017 14.2 0.6 0.2 10.6 0.3 2.4 1 1 1 2 2 2 0 Coatomer WD associated region Nucleoporin_N PF08801.11 RKO84629.1 - 0.017 13.8 6.4 0.28 9.9 1.4 4.0 1 1 2 4 4 4 0 Nup133 N terminal like DUF1513 PF07433.11 RKO84629.1 - 0.045 12.8 0.1 2.4 7.2 0.0 3.1 1 1 2 4 4 4 0 Protein of unknown function (DUF1513) Cytochrom_D1 PF02239.16 RKO84629.1 - 0.061 11.8 0.0 2 6.9 0.0 2.6 1 1 0 2 2 2 0 Cytochrome D1 heme domain IKI3 PF04762.12 RKO84629.1 - 0.25 9.3 0.1 0.45 8.4 0.1 1.3 1 0 0 1 1 1 0 IKI3 family Stk19 PF10494.9 RKO84631.1 - 1.4e-06 28.2 0.0 1.8e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 Serine-threonine protein kinase 19 Pkinase PF00069.25 RKO84632.1 - 2.2e-47 161.6 0.1 2.5e-47 161.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO84632.1 - 2.1e-08 33.8 0.0 3.1e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO84632.1 - 8.5e-07 29.1 0.1 1.6e-06 28.2 0.1 1.5 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 RKO84632.1 - 0.0066 16.1 0.5 0.017 14.8 0.1 1.8 2 0 0 2 2 2 1 Choline/ethanolamine kinase Pkinase_fungal PF17667.1 RKO84632.1 - 0.0088 14.9 0.0 0.011 14.5 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 RKO84632.1 - 0.012 15.0 0.2 0.018 14.4 0.2 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 RKO84632.1 - 0.017 14.5 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Kinase-like MAT1-1-2 PF17043.5 RKO84632.1 - 0.16 11.8 0.1 0.56 10.1 0.0 1.8 2 0 0 2 2 2 0 Mating type protein 1-1-2 of unknown function Seadorna_VP7 PF07387.11 RKO84632.1 - 0.2 10.7 0.1 0.36 9.8 0.1 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 CH PF00307.31 RKO84633.1 - 1.3e-10 41.4 0.0 2.6e-10 40.4 0.0 1.4 1 0 0 1 1 1 1 Calponin homology (CH) domain DJ-1_PfpI PF01965.24 RKO84634.1 - 1.7e-11 44.2 0.0 2e-11 44.0 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family BfiI_DBD PF18243.1 RKO84638.1 - 0.039 13.6 1.8 0.049 13.2 1.8 1.3 1 1 0 1 1 1 0 Metal-independent restriction enzyme BfiI DNA binding domain Mito_carr PF00153.27 RKO84648.1 - 1.7e-26 91.9 5.2 1.8e-13 50.2 0.2 3.2 3 0 0 3 3 3 3 Mitochondrial carrier protein YjcB PF15940.5 RKO84648.1 - 0.077 13.2 0.1 1 9.6 0.1 2.4 2 0 0 2 2 2 0 Family of unknown function Ank_5 PF13857.6 RKO84649.1 - 5.8e-10 39.2 5.7 0.028 14.7 0.0 5.6 4 1 2 6 6 6 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO84649.1 - 1.1e-08 35.6 0.2 0.002 18.7 0.1 3.5 3 1 0 3 3 3 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO84649.1 - 1.4e-07 31.9 0.7 0.43 11.2 0.0 5.4 3 1 1 4 4 4 2 Ankyrin repeats (many copies) DUF5049 PF16468.5 RKO84649.1 - 0.00019 21.3 0.2 0.7 9.8 0.0 4.3 4 1 1 5 5 5 1 Domain of unknown function (DUF5049) Ank_3 PF13606.6 RKO84649.1 - 0.0033 17.8 1.8 38 5.3 0.0 5.5 6 0 0 6 6 6 0 Ankyrin repeat BTB PF00651.31 RKO84650.1 - 0.055 13.7 0.0 0.095 12.9 0.0 1.3 1 0 0 1 1 1 0 BTB/POZ domain Fels1 PF05666.11 RKO84651.1 - 0.1 12.3 0.3 0.2 11.3 0.3 1.4 1 0 0 1 1 1 0 Fels-1 Prophage Protein-like Hamartin PF04388.12 RKO84651.1 - 0.78 8.3 3.0 0.87 8.2 3.0 1.1 1 0 0 1 1 1 0 Hamartin protein ABC_tran PF00005.27 RKO84654.1 - 1.6e-22 80.5 0.0 2.5e-22 79.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 RKO84654.1 - 6.6e-06 25.7 0.3 0.015 14.8 0.7 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain Dynamin_N PF00350.23 RKO84654.1 - 0.002 18.2 0.1 0.0029 17.7 0.1 1.3 1 0 0 1 1 1 1 Dynamin family AAA_29 PF13555.6 RKO84654.1 - 0.0056 16.4 0.1 0.011 15.4 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 RKO84654.1 - 0.0068 16.2 0.0 0.1 12.4 0.0 2.0 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 RKO84654.1 - 0.007 16.9 0.0 0.0088 16.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 RKO84654.1 - 0.012 15.7 0.1 0.02 14.9 0.1 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase Zeta_toxin PF06414.12 RKO84654.1 - 0.031 13.6 0.0 0.045 13.0 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin DUF87 PF01935.17 RKO84654.1 - 0.039 14.1 1.4 0.062 13.4 1.4 1.2 1 0 0 1 1 1 0 Helicase HerA, central domain RsgA_GTPase PF03193.16 RKO84654.1 - 0.081 12.8 0.2 0.11 12.4 0.2 1.2 1 0 0 1 1 1 0 RsgA GTPase Pkinase PF00069.25 RKO84655.1 - 3e-12 46.5 0.0 3e-10 39.9 0.0 2.7 1 1 1 2 2 2 2 Protein kinase domain WW PF00397.26 RKO84655.1 - 6e-07 29.5 4.9 0.00032 20.7 0.1 2.6 2 0 0 2 2 2 2 WW domain Pkinase_Tyr PF07714.17 RKO84655.1 - 0.0044 16.3 0.0 0.0071 15.7 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Caldesmon PF02029.15 RKO84655.1 - 1.3 7.7 35.8 2.2 6.9 35.8 1.3 1 0 0 1 1 1 0 Caldesmon LAP1C PF05609.12 RKO84655.1 - 6.8 5.7 14.5 9.8 5.1 14.5 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) GREB1 PF15782.5 RKO84655.1 - 6.9 3.7 5.6 9.2 3.2 5.6 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Peptidase_C98 PF15499.6 RKO84657.1 - 0.21 11.0 0.2 0.33 10.4 0.0 1.4 2 0 0 2 2 2 0 Ubiquitin-specific peptidase-like, SUMO isopeptidase Kelch_5 PF13854.6 RKO84658.1 - 2e-14 53.2 2.3 3.8e-07 30.0 0.1 3.5 3 1 0 3 3 3 2 Kelch motif Kelch_4 PF13418.6 RKO84658.1 - 8.2e-11 41.7 1.6 5.4e-05 23.1 0.0 3.6 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO84658.1 - 4.1e-09 36.4 0.3 0.0018 18.5 0.1 2.7 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 RKO84658.1 - 1.2e-05 25.5 9.3 0.071 13.4 0.6 4.2 3 1 0 3 3 3 3 Galactose oxidase, central domain Kelch_2 PF07646.15 RKO84658.1 - 7.3e-05 22.6 0.5 0.21 11.6 0.0 3.4 3 0 0 3 3 3 2 Kelch motif Kelch_1 PF01344.25 RKO84658.1 - 0.00024 20.6 2.7 0.0014 18.2 0.1 2.9 3 0 0 3 3 3 1 Kelch motif DLH PF01738.18 RKO84659.1 - 0.0003 20.4 0.1 0.0017 17.9 0.1 1.8 1 1 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S9 PF00326.21 RKO84659.1 - 0.097 12.1 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 Prolyl oligopeptidase family PigN PF04987.14 RKO84660.1 - 1.9e-15 56.7 3.0 1.9e-15 56.7 3.0 1.5 2 0 0 2 2 2 1 Phosphatidylinositolglycan class N (PIG-N) Pre-SET PF05033.16 RKO84661.1 - 1.2e-09 38.7 0.1 2.1e-09 38.0 0.1 1.4 1 0 0 1 1 1 1 Pre-SET motif Transpos_assoc PF13963.6 RKO84661.1 - 0.03 14.7 0.3 0.075 13.4 0.3 1.6 1 0 0 1 1 1 0 Transposase-associated domain AWS PF17907.1 RKO84661.1 - 0.037 14.1 0.9 0.037 14.1 0.9 2.2 2 1 0 2 2 2 0 AWS domain DUF4527 PF15030.6 RKO84662.1 - 0.012 15.1 0.7 0.014 14.9 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4527) RRM_1 PF00076.22 RKO84664.1 - 1.7e-14 53.4 0.1 2.7e-14 52.7 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SR-25 PF10500.9 RKO84665.1 - 0.0016 18.1 5.9 0.0026 17.4 5.9 1.3 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein CbiX PF01903.17 RKO84665.1 - 0.077 13.3 0.0 0.13 12.6 0.0 1.3 1 0 0 1 1 1 0 CbiX Ndc1_Nup PF09531.10 RKO84665.1 - 1.8 7.1 4.9 2.6 6.6 4.9 1.3 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup DUF4551 PF15087.6 RKO84665.1 - 4.1 6.1 6.9 4.9 5.9 6.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) Aminotran_1_2 PF00155.21 RKO84666.1 - 2.5e-12 46.7 0.0 2.8e-06 26.8 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class I and II Aminotran_MocR PF12897.7 RKO84666.1 - 2.4e-05 23.3 0.0 0.075 11.8 0.0 2.2 2 0 0 2 2 2 2 Alanine-glyoxylate amino-transferase Phage_TAC_11 PF11836.8 RKO84669.1 - 0.0012 18.9 1.0 0.0016 18.5 1.0 1.3 1 0 0 1 1 1 1 Phage tail tube protein, GTA-gp10 K_channel_TID PF07941.11 RKO84669.1 - 0.0058 17.1 16.4 0.0058 17.1 16.4 1.7 1 1 1 2 2 2 1 Potassium channel Kv1.4 tandem inactivation domain ANAPC4_WD40 PF12894.7 RKO84670.1 - 0.00031 21.0 0.0 15 5.9 0.0 3.8 4 0 0 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 RKO84670.1 - 0.032 15.1 0.0 12 7.0 0.0 3.8 4 0 0 4 4 4 0 WD domain, G-beta repeat WD40_like PF17005.5 RKO84670.1 - 0.072 12.4 0.0 0.14 11.5 0.0 1.5 1 0 0 1 1 1 0 WD40-like domain DUF4178 PF13785.6 RKO84670.1 - 0.14 12.3 0.0 0.27 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4178) PQQ PF01011.21 RKO84670.1 - 0.18 11.8 0.2 22 5.2 0.0 3.2 3 0 0 3 3 3 0 PQQ enzyme repeat Ras PF00071.22 RKO84672.1 - 6.3e-55 185.2 0.0 7.2e-55 185.0 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO84672.1 - 3.4e-21 75.7 0.0 4.8e-21 75.2 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO84672.1 - 3.1e-07 30.0 0.0 5.1e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 RKO84672.1 - 0.017 14.5 0.0 0.023 14.2 0.0 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 RKO84672.1 - 0.048 13.0 0.0 0.061 12.7 0.0 1.2 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region NB-ARC PF00931.22 RKO84672.1 - 0.049 12.8 0.0 0.55 9.4 0.0 2.0 1 1 1 2 2 2 0 NB-ARC domain VMA21 PF09446.10 RKO84675.1 - 0.033 14.3 0.3 0.092 12.9 0.3 1.7 1 0 0 1 1 1 0 VMA21-like domain HAUS5 PF14817.6 RKO84676.1 - 1e-06 27.8 18.2 0.00065 18.6 5.5 2.1 1 1 1 2 2 2 2 HAUS augmin-like complex subunit 5 Jnk-SapK_ap_N PF09744.9 RKO84676.1 - 0.08 13.2 6.9 3.2 8.0 2.1 2.7 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 Fib_alpha PF08702.10 RKO84676.1 - 0.18 12.0 4.5 1.1 9.5 0.1 3.0 3 1 1 4 4 4 0 Fibrinogen alpha/beta chain family BST2 PF16716.5 RKO84676.1 - 0.9 10.2 6.0 3.7 8.2 0.2 3.3 3 0 0 3 3 3 0 Bone marrow stromal antigen 2 PIN_9 PF18477.1 RKO84676.1 - 0.98 9.7 7.8 0.22 11.8 1.0 2.3 2 0 0 2 2 2 0 PIN like domain DUF4472 PF14739.6 RKO84677.1 - 1e-10 42.3 16.9 1e-10 42.3 16.9 4.3 4 0 0 4 4 4 1 Domain of unknown function (DUF4472) DUF3450 PF11932.8 RKO84677.1 - 0.0049 16.2 2.4 0.0049 16.2 2.4 3.3 2 1 1 3 3 3 2 Protein of unknown function (DUF3450) CENP-F_leu_zip PF10473.9 RKO84677.1 - 0.013 15.5 10.6 0.013 15.5 10.6 5.1 2 1 3 5 5 5 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4055 PF13264.6 RKO84677.1 - 0.12 12.6 5.1 0.54 10.4 5.1 2.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4055) APG6_N PF17675.1 RKO84677.1 - 0.22 12.1 51.9 0.13 12.8 4.9 4.0 3 1 1 4 4 4 0 Apg6 coiled-coil region DUF2968 PF11180.8 RKO84677.1 - 1.2 8.7 26.7 0.08 12.6 0.8 3.2 2 1 0 3 3 3 0 Protein of unknown function (DUF2968) KASH_CCD PF14662.6 RKO84677.1 - 1.4 8.8 43.6 0.15 11.9 17.3 3.4 2 1 1 3 3 3 0 Coiled-coil region of CCDC155 or KASH DUF724 PF05266.14 RKO84677.1 - 2.1 8.2 43.4 0.041 13.7 12.1 4.6 1 1 3 4 4 4 0 Protein of unknown function (DUF724) Mod_r PF07200.13 RKO84677.1 - 2.8 8.0 38.8 0.23 11.6 6.7 4.5 2 1 2 4 4 4 0 Modifier of rudimentary (Mod(r)) protein Leu_zip PF15294.6 RKO84677.1 - 4.3 6.8 41.9 0.65 9.5 3.5 3.4 1 1 1 3 3 3 0 Leucine zipper GAS PF13851.6 RKO84677.1 - 4.5 6.6 42.5 2.6 7.4 3.7 3.6 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding DUF2353 PF09789.9 RKO84677.1 - 4.5 6.5 39.6 8.5 5.6 24.8 2.9 1 1 1 2 2 2 0 Uncharacterized coiled-coil protein (DUF2353) GIT_CC PF16559.5 RKO84677.1 - 5.5 6.9 16.4 2.9 7.8 4.1 3.5 4 1 1 5 5 5 0 GIT coiled-coil Rho guanine nucleotide exchange factor Lipoprotein_20 PF13942.6 RKO84677.1 - 7.3 6.5 26.9 1.6 8.6 5.7 3.4 1 1 2 3 3 3 0 YfhG lipoprotein SNAP PF14938.6 RKO84678.1 - 6.9e-76 255.4 12.0 7.7e-76 255.2 12.0 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP TPR_12 PF13424.6 RKO84678.1 - 0.009 16.3 7.8 0.08 13.2 0.3 2.7 1 1 2 3 3 3 2 Tetratricopeptide repeat DHR-2 PF06920.13 RKO84678.1 - 0.01 14.5 3.0 0.014 14.0 0.4 1.9 1 1 1 2 2 2 0 Dock homology region 2 Spatacsin_C PF14649.6 RKO84678.1 - 0.042 12.9 3.7 0.062 12.4 3.1 1.4 1 1 0 1 1 1 0 Spatacsin C-terminus TPR_2 PF07719.17 RKO84678.1 - 0.11 12.7 11.0 1.9 8.8 0.1 4.5 4 1 0 4 4 4 0 Tetratricopeptide repeat TPR_8 PF13181.6 RKO84678.1 - 0.43 10.9 4.6 41 4.7 0.2 3.9 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO84678.1 - 2.8 8.6 8.4 2.5 8.8 0.1 3.4 2 1 2 4 4 4 0 Tetratricopeptide repeat SnoaL_2 PF12680.7 RKO84679.1 - 0.003 18.1 0.3 0.011 16.4 0.1 2.0 2 0 0 2 2 2 1 SnoaL-like domain TIMELESS_C PF05029.13 RKO84679.1 - 0.051 12.7 0.5 0.069 12.3 0.5 1.1 1 0 0 1 1 1 0 Timeless protein C terminal region DDE_3 PF13358.6 RKO84680.1 - 4.2e-07 29.8 0.0 1e-06 28.6 0.0 1.6 1 0 0 1 1 1 1 DDE superfamily endonuclease HTH_Tnp_ISL3 PF13542.6 RKO84680.1 - 2.4e-06 26.9 0.2 7.8e-06 25.2 0.2 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_23 PF13384.6 RKO84680.1 - 0.00036 20.2 0.1 0.0016 18.2 0.0 2.0 2 0 0 2 2 2 1 Homeodomain-like domain Sigma70_r4_2 PF08281.12 RKO84680.1 - 0.042 13.5 0.1 0.21 11.3 0.0 2.1 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_31 PF13560.6 RKO84680.1 - 0.046 14.1 0.0 0.76 10.2 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_32 PF13565.6 RKO84680.1 - 0.054 14.1 0.6 1.1 9.9 0.0 2.7 2 1 1 3 3 3 0 Homeodomain-like domain MerR PF00376.23 RKO84680.1 - 0.083 12.7 0.6 3.1 7.7 0.1 2.8 2 1 0 2 2 2 0 MerR family regulatory protein HTH_3 PF01381.22 RKO84680.1 - 0.11 12.6 0.0 0.34 11.0 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix HTH_17 PF12728.7 RKO84680.1 - 0.14 12.4 0.0 0.32 11.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_DeoR PF08220.12 RKO84680.1 - 0.2 11.4 1.0 0.36 10.6 0.2 1.8 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain HTH_Crp_2 PF13545.6 RKO84680.1 - 0.26 11.3 0.8 6.1 6.9 0.0 2.4 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain LacI PF00356.21 RKO84680.1 - 1.2 9.0 4.5 27 4.7 0.0 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family eIF2A PF08662.11 RKO84683.1 - 3.5e-79 265.2 0.3 1e-78 263.6 0.2 1.9 2 0 0 2 2 2 1 Eukaryotic translation initiation factor eIF2A WD40 PF00400.32 RKO84683.1 - 0.035 15.0 3.8 2.3 9.2 0.4 3.9 5 0 0 5 5 5 0 WD domain, G-beta repeat PD40 PF07676.12 RKO84683.1 - 0.28 11.2 1.0 13 5.8 0.1 2.9 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat Glyco_hydro_15 PF00723.21 RKO84684.1 - 9.7e-44 149.9 0.0 1.2e-43 149.6 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 15 DNA_methylase PF00145.17 RKO84687.1 - 1.1e-08 34.8 0.0 0.0011 18.4 0.0 2.1 1 1 1 2 2 2 2 C-5 cytosine-specific DNA methylase CMAS PF02353.20 RKO84688.1 - 2.1e-05 24.0 0.3 3.3e-05 23.3 0.1 1.4 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase Ran_BP1 PF00638.18 RKO84690.1 - 4.1e-10 40.0 1.0 1.5e-06 28.4 0.1 2.6 2 1 0 2 2 2 2 RanBP1 domain Raftlin PF15250.6 RKO84690.1 - 0.54 8.9 4.6 0.11 11.2 0.3 1.8 2 0 0 2 2 2 0 Raftlin Nexin_C PF08628.12 RKO84691.1 - 9e-19 68.1 0.0 1.9e-18 67.1 0.0 1.6 1 0 0 1 1 1 1 Sorting nexin C terminal PX PF00787.24 RKO84691.1 - 0.0015 18.5 0.0 0.003 17.5 0.0 1.5 1 0 0 1 1 1 1 PX domain RGS PF00615.19 RKO84691.1 - 0.0084 16.4 0.0 0.015 15.5 0.0 1.4 1 0 0 1 1 1 1 Regulator of G protein signaling domain TerB PF05099.13 RKO84691.1 - 0.08 12.9 1.4 0.17 11.9 1.4 1.5 1 0 0 1 1 1 0 Tellurite resistance protein TerB ArsA_ATPase PF02374.15 RKO84692.1 - 9.4e-99 330.4 0.3 1.2e-98 330.1 0.3 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_31 PF13614.6 RKO84692.1 - 0.0002 21.3 0.0 0.00088 19.2 0.0 1.9 2 0 0 2 2 2 1 AAA domain CbiA PF01656.23 RKO84692.1 - 0.1 12.6 0.0 0.17 12.0 0.0 1.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain Fibrillarin PF01269.17 RKO84693.1 - 3.5e-108 359.9 0.0 4.3e-108 359.6 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin GCD14 PF08704.10 RKO84693.1 - 1.3e-05 25.0 0.0 1.8e-05 24.5 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit PCMT PF01135.19 RKO84693.1 - 0.0039 17.0 0.1 0.0065 16.2 0.1 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltr_RsmB-F PF01189.17 RKO84693.1 - 0.0059 16.3 0.0 0.032 13.9 0.0 2.1 1 1 1 2 2 2 1 16S rRNA methyltransferase RsmB/F FtsJ PF01728.19 RKO84693.1 - 0.036 14.2 0.0 0.049 13.7 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase PAP2 PF01569.21 RKO84695.1 - 4.6e-19 68.5 5.0 5.8e-19 68.2 5.0 1.1 1 0 0 1 1 1 1 PAP2 superfamily PhyH PF05721.13 RKO84696.1 - 1.5e-08 35.1 0.5 4.6e-08 33.6 0.5 1.7 1 1 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) Aft1_HRA PF11786.8 RKO84696.1 - 0.035 14.4 1.4 0.035 14.4 1.4 2.2 2 0 0 2 2 2 0 Aft1 HRA domain ING PF12998.7 RKO84698.1 - 0.0005 20.6 3.0 0.039 14.5 1.2 2.2 1 1 0 2 2 2 2 Inhibitor of growth proteins N-terminal histone-binding WbqC PF08889.11 RKO84698.1 - 0.011 15.7 1.4 0.013 15.4 1.4 1.1 1 0 0 1 1 1 0 WbqC-like protein family YkuD_2 PF13645.6 RKO84698.1 - 0.028 13.9 0.0 0.039 13.4 0.0 1.4 1 0 0 1 1 1 0 L,D-transpeptidase catalytic domain Noelin-1 PF12308.8 RKO84698.1 - 0.23 11.5 3.0 1.2 9.2 0.6 2.2 2 0 0 2 2 2 0 Neurogenesis glycoprotein Nup54 PF13874.6 RKO84698.1 - 0.42 10.7 3.5 1.2 9.3 3.5 1.7 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 DUF1627 PF07789.12 RKO84699.1 - 0.08 12.6 0.2 0.1 12.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1627) DUF1590 PF07629.11 RKO84699.1 - 0.11 12.3 8.4 1.8 8.5 2.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1590) Kinesin PF00225.23 RKO84700.1 - 4.2e-78 262.6 0.1 5e-78 262.4 0.1 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO84700.1 - 1.2e-13 51.3 0.0 4.1e-13 49.5 0.0 1.9 2 0 0 2 2 2 1 Microtubule binding PPR_2 PF13041.6 RKO84701.1 - 7e-05 22.9 0.0 0.0069 16.6 0.0 3.3 3 0 0 3 3 3 1 PPR repeat family PPR_3 PF13812.6 RKO84701.1 - 0.018 15.1 0.0 2.4 8.3 0.0 2.7 2 0 0 2 2 2 0 Pentatricopeptide repeat domain PPR_long PF17177.4 RKO84701.1 - 0.041 13.2 0.0 2.3 7.5 0.0 2.8 2 1 1 3 3 3 0 Pentacotripeptide-repeat region of PRORP Cnd1 PF12717.7 RKO84701.1 - 0.074 13.1 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1 Abhydrolase_1 PF00561.20 RKO84703.1 - 1.9e-07 31.0 0.0 2.5e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 RKO84703.1 - 1.8e-06 28.8 2.1 3.3e-06 27.9 0.0 2.0 2 0 0 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 RKO84703.1 - 5.4e-06 25.8 0.0 7.5e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF1057 PF06342.12 RKO84703.1 - 0.079 12.0 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) Cutinase PF01083.22 RKO84703.1 - 0.17 11.9 0.1 0.27 11.2 0.1 1.3 1 0 0 1 1 1 0 Cutinase Palm_thioest PF02089.15 RKO84703.1 - 0.23 11.3 0.0 0.33 10.7 0.0 1.2 1 0 0 1 1 1 0 Palmitoyl protein thioesterase MatE PF01554.18 RKO84704.1 - 6.6e-49 165.7 16.1 6.3e-28 97.4 9.1 2.7 3 0 0 3 3 3 2 MatE Tyr-DNA_phospho PF06087.12 RKO84706.1 - 2.1e-94 316.8 0.0 2.5e-94 316.6 0.0 1.0 1 0 0 1 1 1 1 Tyrosyl-DNA phosphodiesterase SH3_9 PF14604.6 RKO84708.1 - 0.17 11.8 0.0 0.33 10.9 0.0 1.5 1 0 0 1 1 1 0 Variant SH3 domain MAP65_ASE1 PF03999.12 RKO84708.1 - 1.2 7.8 3.0 1.6 7.4 3.0 1.2 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) Hamartin PF04388.12 RKO84708.1 - 5.3 5.6 7.6 6.4 5.3 7.6 1.2 1 0 0 1 1 1 0 Hamartin protein Bromo_TP PF07524.13 RKO84709.1 - 0.088 12.8 0.0 8.3 6.5 0.0 2.5 2 0 0 2 2 2 0 Bromodomain associated DUF2345 PF10106.9 RKO84712.1 - 0.85 9.5 14.8 0.37 10.6 0.9 4.3 4 1 0 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2345) HMG_box PF00505.19 RKO84713.1 - 9.3e-07 29.2 0.6 2.6e-06 27.8 0.6 1.7 1 1 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 RKO84713.1 - 6.8e-06 26.6 0.2 6.8e-06 26.6 0.2 1.6 2 0 0 2 2 2 1 HMG-box domain Myb_DNA-binding PF00249.31 RKO84714.1 - 8.3e-26 89.9 2.3 3.2e-12 46.5 0.0 2.5 3 0 0 3 3 3 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO84714.1 - 1.1e-23 83.2 0.0 3e-15 56.2 0.0 2.1 1 1 1 2 2 2 2 Myb-like DNA-binding domain Gln-synt_C PF00120.24 RKO84715.1 - 9.5e-45 153.1 0.0 1.5e-44 152.5 0.0 1.2 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N_2 PF16952.5 RKO84715.1 - 9.7e-08 31.8 0.1 2e-07 30.8 0.1 1.6 1 0 0 1 1 1 1 Glutamine synthetase N-terminal domain Amidohydro_2 PF04909.14 RKO84715.1 - 9.9e-07 28.8 0.1 1.7e-06 28.0 0.1 1.3 1 0 0 1 1 1 1 Amidohydrolase MMR_HSR1 PF01926.23 RKO84717.1 - 4e-18 65.6 0.0 4.7e-18 65.3 0.0 1.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 RKO84717.1 - 4e-08 32.9 0.0 4.9e-08 32.6 0.0 1.1 1 0 0 1 1 1 1 Ferrous iron transport protein B Roc PF08477.13 RKO84717.1 - 0.072 13.3 0.0 0.097 12.9 0.0 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 RKO84717.1 - 0.16 11.4 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit TB2_DP1_HVA22 PF03134.19 RKO84720.1 - 2.3e-16 59.5 6.5 2.6e-16 59.3 6.5 1.0 1 0 0 1 1 1 1 TB2/DP1, HVA22 family Kelch_4 PF13418.6 RKO84721.1 - 1.2e-12 47.6 0.2 2.4e-09 37.1 0.0 2.7 2 0 0 2 2 2 2 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO84721.1 - 2e-08 33.7 1.3 0.00064 19.3 0.0 2.5 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 RKO84721.1 - 2.3e-06 27.8 0.0 2.3e-06 27.8 0.0 3.5 4 0 0 4 4 4 1 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO84721.1 - 2.6e-06 27.3 0.3 0.04 13.9 0.0 2.6 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 RKO84721.1 - 1.2e-05 25.4 0.7 0.092 13.1 0.0 3.1 2 1 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 RKO84721.1 - 3e-05 23.8 1.4 0.015 15.2 0.0 2.6 2 0 0 2 2 2 2 Kelch motif S36_mt PF10937.8 RKO84721.1 - 7.1 8.3 11.1 0.35 12.5 5.6 1.7 2 0 0 2 2 2 0 Ribosomal protein S36, mitochondrial Dynactin_p22 PF07426.11 RKO84723.1 - 5.8e-12 45.8 0.2 6.1e-11 42.5 0.1 2.3 1 1 1 2 2 2 1 Dynactin subunit p22 Adenine_deam_C PF13382.6 RKO84723.1 - 0.16 11.3 0.1 0.5 9.7 0.0 1.7 2 0 0 2 2 2 0 Adenine deaminase C-terminal domain Sec63 PF02889.16 RKO84725.1 - 4.2e-36 124.4 0.0 5.2e-36 124.1 0.0 1.1 1 0 0 1 1 1 1 Sec63 Brl domain HHH_5 PF14520.6 RKO84725.1 - 0.00058 20.4 0.0 0.0079 16.8 0.1 2.5 2 0 0 2 2 2 1 Helix-hairpin-helix domain DUF4332 PF14229.6 RKO84725.1 - 0.0038 17.4 0.1 0.013 15.7 0.0 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4332) Cdd1 PF11731.8 RKO84725.1 - 0.012 15.8 0.0 0.061 13.6 0.0 2.2 2 0 0 2 2 2 0 Pathogenicity locus TfoX_C PF04994.13 RKO84725.1 - 0.043 13.9 0.2 1.7 8.8 0.0 2.4 2 0 0 2 2 2 0 TfoX C-terminal domain Sugar_tr PF00083.24 RKO84726.1 - 2.7e-71 240.8 19.2 1.4e-40 139.6 3.5 2.0 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 RKO84726.1 - 4.2e-15 55.5 32.4 4.7e-14 52.1 12.0 2.9 2 1 1 3 3 3 2 Major Facilitator Superfamily PsaL PF02605.15 RKO84726.1 - 0.13 11.9 1.8 0.26 10.9 0.1 2.2 2 0 0 2 2 2 0 Photosystem I reaction centre subunit XI peroxidase PF00141.23 RKO84727.1 - 3.4e-11 43.3 0.0 5.5e-11 42.6 0.0 1.3 1 0 0 1 1 1 1 Peroxidase tRNA_SAD PF07973.14 RKO84727.1 - 0.16 12.1 0.1 0.4 10.8 0.0 1.7 2 0 0 2 2 2 0 Threonyl and Alanyl tRNA synthetase second additional domain Gly-rich_Ago1 PF12764.7 RKO84729.1 - 8.8 7.2 11.8 6 7.7 2.1 2.6 2 1 0 3 3 3 0 Glycine-rich region of argonaut Mycobact_memb PF05423.13 RKO84732.1 - 0.014 15.3 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 Mycobacterium membrane protein OrfB_Zn_ribbon PF07282.11 RKO84732.1 - 0.035 14.0 0.0 0.091 12.7 0.0 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Glyco_hydro_15 PF00723.21 RKO84735.1 - 4.4e-45 154.3 0.0 1.6e-38 132.6 0.0 2.1 2 0 0 2 2 2 2 Glycosyl hydrolases family 15 Tcp10_C PF07202.13 RKO84736.1 - 7.4e-51 172.6 2.3 9.6e-51 172.2 2.3 1.1 1 0 0 1 1 1 1 T-complex protein 10 C-terminus MORN_2 PF07661.13 RKO84736.1 - 0.082 13.2 7.6 44 4.8 0.0 5.5 6 2 1 7 7 7 0 MORN repeat variant PsaD PF02531.16 RKO84736.1 - 0.13 11.8 0.1 4.6 6.8 0.0 2.7 1 1 0 2 2 2 0 PsaD DUF4468 PF14730.6 RKO84736.1 - 0.16 12.3 0.0 0.31 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4468) with TBP-like fold DUF3684 PF12449.8 RKO84738.1 - 1.3e-17 63.0 0.5 4.4e-17 61.2 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF3684) WLM PF08325.10 RKO84738.1 - 0.027 14.6 1.3 0.049 13.7 1.3 1.3 1 0 0 1 1 1 0 WLM domain F-box-like PF12937.7 RKO84741.1 - 5.9e-09 35.7 0.1 1.4e-08 34.5 0.1 1.7 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO84741.1 - 0.00087 19.1 0.0 0.0029 17.4 0.0 1.9 1 0 0 1 1 1 1 F-box domain MFS_1 PF07690.16 RKO84743.1 - 1.3e-06 27.6 7.8 1.6e-06 27.3 7.8 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Mannosyl_trans3 PF11051.8 RKO84746.1 - 4.2e-21 75.5 0.3 1e-14 54.6 0.0 2.6 3 0 0 3 3 3 2 Mannosyltransferase putative CLN3 PF02487.17 RKO84746.1 - 0.014 14.5 3.3 0.048 12.7 3.3 1.7 1 1 0 1 1 1 0 CLN3 protein CDC45 PF02724.14 RKO84746.1 - 1 7.6 24.2 1.2 7.3 24.2 1.1 1 0 0 1 1 1 0 CDC45-like protein RR_TM4-6 PF06459.12 RKO84746.1 - 4.4 7.0 23.3 7.3 6.3 23.3 1.3 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 FGF-BP1 PF06473.12 RKO84746.1 - 5.5 6.8 18.5 8.1 6.2 18.5 1.1 1 0 0 1 1 1 0 FGF binding protein 1 (FGF-BP1) Presenilin PF01080.17 RKO84746.1 - 9.4 4.9 22.8 13 4.5 22.8 1.1 1 0 0 1 1 1 0 Presenilin PPP1R35_C PF15503.6 RKO84747.1 - 7.4e-08 32.3 1.3 1.5e-07 31.4 0.0 2.2 2 0 0 2 2 2 1 Protein phosphatase 1 regulatory subunit 35 C-terminus POLO_box PF00659.18 RKO84748.1 - 1.2e-37 127.9 2.6 4.9e-21 74.7 1.2 2.3 2 0 0 2 2 2 2 POLO box duplicated region DUF5305 PF17231.2 RKO84749.1 - 1.5 8.2 4.2 4.8 6.5 3.8 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5305) zf-RING_11 PF17123.5 RKO84754.1 - 1.2e-12 47.3 10.7 2.5e-12 46.3 10.7 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_2 PF13639.6 RKO84754.1 - 5.1e-09 36.3 10.5 7.6e-09 35.8 10.5 1.3 1 0 0 1 1 1 1 Ring finger domain FHA PF00498.26 RKO84754.1 - 3.1e-05 24.2 0.0 5e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 FHA domain zf-RING_5 PF14634.6 RKO84754.1 - 4.9e-05 23.2 9.5 8.6e-05 22.4 9.5 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 RKO84754.1 - 0.00023 21.2 2.3 0.00036 20.5 2.3 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_2 PF13923.6 RKO84754.1 - 0.00028 20.7 12.2 0.00047 20.0 12.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO84754.1 - 0.00061 19.6 10.4 0.001 18.9 10.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 RKO84754.1 - 0.013 15.5 12.5 0.026 14.5 12.5 1.6 1 0 0 1 1 1 0 RING-type zinc-finger zf-rbx1 PF12678.7 RKO84754.1 - 0.019 15.3 11.9 0.13 12.6 11.9 2.0 1 1 0 1 1 1 0 RING-H2 zinc finger domain PHD PF00628.29 RKO84754.1 - 0.023 14.6 6.8 0.042 13.8 6.8 1.5 1 0 0 1 1 1 0 PHD-finger Arf PF00025.21 RKO84755.1 - 1.8e-19 69.9 0.0 2.3e-19 69.5 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family G-alpha PF00503.20 RKO84755.1 - 0.0017 17.6 0.0 0.019 14.1 0.0 1.9 2 0 0 2 2 2 1 G-protein alpha subunit Roc PF08477.13 RKO84755.1 - 0.0081 16.4 0.1 0.074 13.3 0.1 2.0 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 RKO84755.1 - 0.21 11.0 0.0 0.27 10.6 0.0 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Ank_4 PF13637.6 RKO84756.1 - 2.5e-16 59.8 0.0 1.4e-07 31.9 0.0 3.1 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO84756.1 - 1.1e-15 57.4 0.2 7.3e-05 23.0 0.0 4.1 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO84756.1 - 2.9e-12 47.0 0.0 1.4e-08 35.2 0.0 2.2 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO84756.1 - 6.2e-10 38.5 0.0 1.1 10.1 0.0 4.8 5 0 0 5 5 5 3 Ankyrin repeat DUF5049 PF16468.5 RKO84756.1 - 0.042 13.8 0.0 21 5.1 0.0 3.4 2 1 2 4 4 4 0 Domain of unknown function (DUF5049) DEP PF00610.21 RKO84756.1 - 0.12 12.5 0.1 16 5.7 0.0 3.5 3 1 1 4 4 4 0 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) DUF768 PF05589.11 RKO84756.1 - 0.15 12.1 0.1 1.1 9.3 0.0 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF768) PGM_PMM_I PF02878.16 RKO84758.1 - 1.7e-33 115.3 0.1 2.2e-33 114.9 0.1 1.2 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 RKO84758.1 - 5.8e-16 59.0 0.0 1.3e-15 57.9 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Asp PF00026.23 RKO84759.1 - 0.028 13.8 1.5 3.8 6.9 0.1 2.1 1 1 1 2 2 2 0 Eukaryotic aspartyl protease Mersacidin PF16934.5 RKO84759.1 - 0.34 10.7 0.1 0.34 10.7 0.1 1.7 2 0 0 2 2 2 0 Two-component Enterococcus faecalis cytolysin (EFC) HOOK PF05622.12 RKO84760.1 - 0.00078 17.7 1.9 0.016 13.4 0.1 2.0 1 1 1 2 2 2 2 HOOK protein Atg14 PF10186.9 RKO84760.1 - 0.91 8.5 4.6 1.9 7.5 4.6 1.5 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 FUSC PF04632.12 RKO84760.1 - 1.9 7.0 13.9 2.8 6.4 13.9 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family PRKG1_interact PF15898.5 RKO84762.1 - 0.021 15.7 6.7 0.18 12.7 5.0 2.1 2 0 0 2 2 2 0 cGMP-dependent protein kinase interacting domain CENP-F_leu_zip PF10473.9 RKO84762.1 - 0.11 12.5 11.6 11 6.1 10.7 2.1 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HIP1_clath_bdg PF16515.5 RKO84762.1 - 0.62 10.7 13.4 6.6 7.4 0.1 2.3 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 CRAL_TRIO_N PF03765.15 RKO84765.1 - 1.3e-08 34.9 0.0 1.6e-08 34.6 0.0 1.4 1 0 0 1 1 1 1 CRAL/TRIO, N-terminal domain IQCJ-SCHIP1 PF15157.6 RKO84765.1 - 0.0045 16.9 2.4 0.0048 16.7 1.9 1.4 1 1 0 1 1 1 1 Fusion protein IQCJ-SCHIP1 with IQ-like motif FCH PF00611.23 RKO84766.1 - 0.0015 18.8 0.2 0.0047 17.2 0.0 2.0 2 0 0 2 2 2 1 Fes/CIP4, and EFC/F-BAR homology domain Pkinase PF00069.25 RKO84768.1 - 6.1e-27 94.6 0.0 8e-27 94.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO84768.1 - 1.8e-10 40.6 0.0 2.3e-10 40.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO84768.1 - 1.5e-07 31.6 0.3 2.2e-06 27.8 0.1 2.2 1 1 1 2 2 2 1 Phosphotransferase enzyme family PIP49_C PF12260.8 RKO84768.1 - 0.053 13.2 0.0 0.094 12.3 0.0 1.4 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 Pkinase_fungal PF17667.1 RKO84768.1 - 0.064 12.0 0.0 0.086 11.6 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase DUF4097 PF13349.6 RKO84769.1 - 4.7e-07 29.4 3.4 6.3e-07 29.0 3.4 1.1 1 0 0 1 1 1 1 Putative adhesin FHA PF00498.26 RKO84770.1 - 0.073 13.4 0.0 0.097 13.0 0.0 1.2 1 0 0 1 1 1 0 FHA domain WD40 PF00400.32 RKO84771.1 - 0.056 14.3 2.9 1e+02 4.0 0.1 4.3 3 1 0 3 3 3 0 WD domain, G-beta repeat Nucleoporin_N PF08801.11 RKO84771.1 - 0.14 10.8 0.0 2.4 6.8 0.0 2.1 1 1 0 2 2 2 0 Nup133 N terminal like PQQ_3 PF13570.6 RKO84771.1 - 0.97 10.0 10.4 13 6.4 0.3 4.5 3 2 0 3 3 3 0 PQQ-like domain DUF1664 PF07889.12 RKO84772.1 - 0.17 11.9 0.0 0.34 11.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) CAF1 PF04857.20 RKO84773.1 - 9.4e-12 44.7 0.4 1.7e-11 43.8 0.4 1.6 1 1 0 1 1 1 1 CAF1 family ribonuclease Torus PF16131.5 RKO84773.1 - 0.022 15.5 1.6 0.022 15.5 1.6 1.9 1 1 1 2 2 2 0 Torus domain Mre11_DNA_bind PF04152.14 RKO84774.1 - 1.2e-50 172.2 0.3 1.9e-50 171.5 0.3 1.3 1 0 0 1 1 1 1 Mre11 DNA-binding presumed domain Metallophos PF00149.28 RKO84774.1 - 8.8e-14 52.5 0.0 1.9e-13 51.4 0.0 1.6 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 RKO84774.1 - 9e-05 22.7 0.0 0.0021 18.3 0.0 2.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain SDA1 PF05285.12 RKO84775.1 - 0.0026 17.3 6.0 0.0026 17.3 6.0 1.1 1 0 0 1 1 1 1 SDA1 Nop14 PF04147.12 RKO84775.1 - 2.1 6.4 11.3 2.5 6.2 11.3 1.1 1 0 0 1 1 1 0 Nop14-like family Glutaredoxin PF00462.24 RKO84776.1 - 3e-18 65.8 0.0 3.5e-18 65.6 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_2 PF13098.6 RKO84776.1 - 0.00042 20.7 0.2 0.0012 19.3 0.2 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain DUF836 PF05768.14 RKO84776.1 - 0.009 16.4 0.0 0.011 16.1 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) GST_N_3 PF13417.6 RKO84776.1 - 0.029 14.8 0.0 0.034 14.5 0.0 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Thioredoxin_9 PF14595.6 RKO84776.1 - 0.091 12.5 0.0 0.11 12.2 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin GST_N_2 PF13409.6 RKO84776.1 - 0.12 12.7 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Thioredoxin_3 PF13192.6 RKO84776.1 - 0.13 12.3 0.0 0.21 11.7 0.0 1.4 1 1 0 1 1 1 0 Thioredoxin domain TraF PF13728.6 RKO84776.1 - 0.13 12.1 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 F plasmid transfer operon protein Peptidase_C48 PF02902.19 RKO84777.1 - 8.9e-11 42.0 1.5 1e-08 35.3 0.1 2.5 2 1 0 2 2 2 2 Ulp1 protease family, C-terminal catalytic domain Thioredoxin_11 PF18078.1 RKO84777.1 - 0.13 12.4 0.1 0.3 11.2 0.1 1.5 1 0 0 1 1 1 0 Thioredoxin-like SNTX domain HAUS2 PF15003.6 RKO84779.1 - 2.2e-15 56.9 0.1 2.6e-15 56.7 0.1 1.0 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 2 GvpK PF05121.12 RKO84779.1 - 0.82 9.7 4.1 2.4 8.2 3.3 2.2 3 1 0 3 3 3 0 Gas vesicle protein K Ion_trans_N PF08412.10 RKO84781.1 - 0.15 11.7 0.1 0.32 10.6 0.1 1.5 1 0 0 1 1 1 0 Ion transport protein N-terminal E1-E2_ATPase PF00122.20 RKO84783.1 - 5e-19 68.5 2.4 6.7e-19 68.1 0.5 1.9 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 RKO84783.1 - 1.2e-08 34.5 0.0 2.5e-07 30.3 0.0 2.3 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus DUF3852 PF12963.7 RKO84783.1 - 0.0089 16.4 0.4 0.017 15.5 0.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3852) LPG_synthase_TM PF03706.13 RKO84783.1 - 0.15 11.5 1.3 1.2 8.6 0.1 2.1 2 0 0 2 2 2 0 Lysylphosphatidylglycerol synthase TM region Adeno_E3_CR2 PF02439.15 RKO84783.1 - 0.23 11.3 0.0 0.23 11.3 0.0 2.1 3 0 0 3 3 3 0 Adenovirus E3 region protein CR2 DUF5549 PF17703.1 RKO84784.1 - 0.0077 15.9 1.3 0.011 15.3 1.3 1.5 1 0 0 1 1 1 1 Family of unknown function (DUF5549) Nucleoside_tran PF01733.18 RKO84785.1 - 2.8e-20 72.9 4.1 3.2e-19 69.4 0.1 2.2 2 0 0 2 2 2 2 Nucleoside transporter PMSR PF01625.21 RKO84786.1 - 9.6e-58 194.7 0.3 1.1e-57 194.5 0.3 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase Kelch_3 PF13415.6 RKO84787.1 - 3.5 8.0 8.8 1.7 9.0 0.1 3.5 4 0 0 4 4 4 0 Galactose oxidase, central domain PH_18 PF18469.1 RKO84789.1 - 0.00025 21.0 1.6 0.15 12.1 0.3 2.2 2 0 0 2 2 2 2 Pleckstrin homology domain VasI PF11319.8 RKO84789.1 - 0.0061 16.2 1.2 2 8.0 0.1 2.2 2 0 0 2 2 2 2 Type VI secretion system VasI, EvfG, VC_A0118 DUF5333 PF17267.2 RKO84789.1 - 0.035 14.3 0.4 11 6.3 0.1 2.8 2 0 0 2 2 2 0 Family of unknown function (DUF5333) DUF406 PF04175.12 RKO84789.1 - 0.99 9.9 3.1 8 7.0 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF406) Defensin_beta PF00711.19 RKO84790.1 - 0.31 11.1 2.0 0.52 10.4 2.0 1.3 1 0 0 1 1 1 0 Beta defensin Tetraspanin PF00335.20 RKO84791.1 - 1.6e-12 47.7 0.5 1.9e-12 47.4 0.5 1.1 1 0 0 1 1 1 1 Tetraspanin family ESPR PF13018.6 RKO84791.1 - 0.028 14.2 0.0 0.078 12.8 0.0 1.8 1 0 0 1 1 1 0 Extended Signal Peptide of Type V secretion system peroxidase PF00141.23 RKO84793.1 - 5.6e-27 94.9 0.0 8.9e-27 94.3 0.0 1.3 1 0 0 1 1 1 1 Peroxidase Syntaxin PF00804.25 RKO84794.1 - 5.2e-26 91.6 15.4 1.1e-25 90.5 15.4 1.5 1 1 0 1 1 1 1 Syntaxin SNARE PF05739.19 RKO84794.1 - 3.3e-15 55.8 1.5 1e-14 54.2 1.5 1.9 1 0 0 1 1 1 1 SNARE domain Syntaxin_2 PF14523.6 RKO84794.1 - 2.7e-07 30.9 20.7 1.2e-06 28.8 11.6 2.6 2 1 0 2 2 2 2 Syntaxin-like protein SKA1 PF07160.12 RKO84794.1 - 0.024 14.5 1.2 0.024 14.5 1.2 2.2 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 1 Vac_Fusion PF02346.16 RKO84794.1 - 0.033 13.8 2.8 7.2 6.3 0.1 3.4 3 1 1 4 4 4 0 Chordopoxvirus multifunctional envelope protein A27 Laminin_II PF06009.12 RKO84794.1 - 0.049 13.6 0.6 0.049 13.6 0.6 3.2 2 1 0 2 2 2 0 Laminin Domain II DUF2207 PF09972.9 RKO84794.1 - 0.12 11.1 1.5 0.29 9.8 0.0 1.9 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) MutS_III PF05192.18 RKO84794.1 - 0.2 11.9 6.0 0.33 11.1 6.0 1.3 1 0 0 1 1 1 0 MutS domain III DUF2951 PF11166.8 RKO84794.1 - 0.21 11.8 1.6 0.3 11.3 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2951) FAA_hydrolase_N PF09298.11 RKO84794.1 - 0.44 10.8 8.8 0.045 13.9 1.9 2.6 1 1 2 3 3 3 0 Fumarylacetoacetase N-terminal DUF3094 PF11293.8 RKO84794.1 - 1.6 8.5 5.0 0.31 10.8 0.8 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) LMBR1 PF04791.16 RKO84794.1 - 2.9 6.7 13.4 17 4.2 13.4 1.9 1 1 0 1 1 1 0 LMBR1-like membrane protein COG2 PF06148.11 RKO84794.1 - 3.4 7.8 8.8 1.7 8.8 0.2 3.1 2 2 2 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 Synaptobrevin PF00957.21 RKO84794.1 - 4.1 7.3 17.6 5.1 7.0 0.3 3.6 3 2 0 3 3 3 0 Synaptobrevin DUF4709 PF15821.5 RKO84794.1 - 4.2 7.7 12.2 2.8 8.3 1.4 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4709) IZUMO PF15005.6 RKO84794.1 - 7.1 7.1 9.6 23 5.5 0.6 3.0 1 1 1 3 3 3 0 Izumo sperm-egg fusion, Ig domain-associated PCRF PF03462.18 RKO84794.1 - 7.6 6.3 12.7 0.42 10.5 1.5 2.6 1 1 2 3 3 3 0 PCRF domain ADH_zinc_N_2 PF13602.6 RKO84797.1 - 1.3e-11 45.6 0.0 8e-11 43.1 0.0 2.3 2 1 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 RKO84797.1 - 1.8e-09 37.5 0.0 3.4e-09 36.6 0.0 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 RKO84797.1 - 4.9e-06 26.5 0.0 5.9e-05 23.1 0.0 2.3 2 0 0 2 2 2 1 Zinc-binding dehydrogenase DNA_pol_A PF00476.20 RKO84801.1 - 5.9e-52 177.0 0.0 7.4e-52 176.6 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase family A DUF761 PF05553.11 RKO84801.1 - 0.24 11.0 1.7 0.43 10.1 1.7 1.4 1 0 0 1 1 1 0 Cotton fibre expressed protein PARP PF00644.20 RKO84803.1 - 0.00085 19.0 0.0 0.00085 19.0 0.0 2.3 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase catalytic domain Transglut_i_TM PF14400.6 RKO84803.1 - 0.061 13.4 13.8 0.15 12.1 13.8 1.6 1 0 0 1 1 1 0 Inactive transglutaminase fused to 7 transmembrane helices BING4CT PF08149.11 RKO84803.1 - 0.41 10.5 0.0 0.41 10.5 0.0 2.1 2 0 0 2 2 2 0 BING4CT (NUC141) domain Exonuc_VII_L PF02601.15 RKO84803.1 - 4.1 6.9 21.2 0.62 9.6 13.6 2.5 2 1 0 2 2 2 0 Exonuclease VII, large subunit DUF3246 PF11596.8 RKO84804.1 - 0.18 11.2 3.5 0.057 12.8 0.6 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3246) NOA36 PF06524.12 RKO84804.1 - 1.7 7.9 16.9 0.12 11.7 5.4 2.5 2 0 0 2 2 2 0 NOA36 protein zf-like PF04071.12 RKO84805.1 - 0.3 11.0 0.1 0.3 11.0 0.1 2.3 1 1 1 2 2 2 0 Cysteine-rich small domain Tudor-knot PF11717.8 RKO84807.1 - 2.5e-12 46.5 0.5 4.3e-12 45.7 0.5 1.4 1 0 0 1 1 1 1 RNA binding activity-knot of a chromodomain Chromo PF00385.24 RKO84807.1 - 0.0049 16.8 2.3 0.0073 16.2 2.3 1.3 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain PWWP PF00855.17 RKO84807.1 - 0.037 14.4 0.1 0.041 14.3 0.1 1.3 1 0 0 1 1 1 0 PWWP domain DUF5383 PF17355.2 RKO84807.1 - 0.084 13.3 0.1 0.19 12.1 0.0 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5383) DUF4407 PF14362.6 RKO84809.1 - 0.0075 15.7 4.6 0.03 13.7 5.3 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4407) DUF812 PF05667.11 RKO84809.1 - 0.032 13.1 0.9 0.054 12.4 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF812) BRE1 PF08647.11 RKO84809.1 - 0.04 14.0 5.2 0.07 13.2 5.2 1.3 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase PKcGMP_CC PF16808.5 RKO84809.1 - 0.061 13.2 0.0 0.2 11.6 0.0 1.8 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase TMF_DNA_bd PF12329.8 RKO84809.1 - 0.075 13.0 3.2 0.16 12.0 3.2 1.4 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Phage_GP20 PF06810.11 RKO84809.1 - 0.091 12.6 3.4 0.16 11.8 3.4 1.3 1 0 0 1 1 1 0 Phage minor structural protein GP20 ERM PF00769.19 RKO84809.1 - 0.099 12.4 6.9 0.16 11.8 6.9 1.2 1 0 0 1 1 1 0 Ezrin/radixin/moesin family Med9 PF07544.13 RKO84809.1 - 0.13 12.4 0.7 0.27 11.3 0.7 1.4 1 0 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 zf-C3H1 PF10650.9 RKO84809.1 - 0.17 11.7 0.1 0.36 10.6 0.1 1.6 1 0 0 1 1 1 0 Putative zinc-finger domain Atg14 PF10186.9 RKO84809.1 - 0.28 10.2 7.2 0.037 13.1 3.2 1.5 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 T4SS PF07996.11 RKO84809.1 - 0.35 11.2 6.9 0.76 10.2 6.9 1.5 1 0 0 1 1 1 0 Type IV secretion system proteins Fez1 PF06818.15 RKO84809.1 - 0.54 10.7 4.8 0.89 10.0 4.8 1.2 1 0 0 1 1 1 0 Fez1 ZapB PF06005.12 RKO84809.1 - 0.76 10.3 2.7 1.4 9.4 2.7 1.4 1 0 0 1 1 1 0 Cell division protein ZapB Spc7 PF08317.11 RKO84809.1 - 1.1 8.1 9.6 1.7 7.5 9.6 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein CENP-H PF05837.12 RKO84809.1 - 1.5 9.3 5.3 3.3 8.2 5.3 1.5 1 0 0 1 1 1 0 Centromere protein H (CENP-H) DUF2968 PF11180.8 RKO84809.1 - 2.8 7.5 9.8 5.1 6.7 9.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) APG6_N PF17675.1 RKO84809.1 - 4.1 7.9 10.3 7.4 7.1 10.3 1.4 1 0 0 1 1 1 0 Apg6 coiled-coil region CPL PF08144.11 RKO84810.1 - 1.5e-26 93.5 0.1 4.1e-24 85.6 0.0 4.1 4 1 0 4 4 4 1 CPL (NUC119) domain PUF PF00806.19 RKO84810.1 - 0.0023 17.5 0.0 50 3.9 0.0 4.9 6 0 0 6 6 6 2 Pumilio-family RNA binding repeat Codanin-1_C PF15296.6 RKO84810.1 - 0.54 10.3 0.0 0.54 10.3 0.0 2.3 3 0 0 3 3 3 0 Codanin-1 C-terminus Beta-lactamase PF00144.24 RKO84811.1 - 7.7e-31 107.5 1.9 6.5e-18 65.1 0.1 2.0 2 0 0 2 2 2 2 Beta-lactamase Beta-lactamase2 PF13354.6 RKO84811.1 - 0.057 13.0 0.2 0.96 9.0 0.0 2.3 2 1 0 2 2 2 0 Beta-lactamase enzyme family Tyrosinase PF00264.20 RKO84812.1 - 3.4e-31 109.3 4.2 5.7e-31 108.5 4.2 1.3 1 0 0 1 1 1 1 Common central domain of tyrosinase COesterase PF00135.28 RKO84813.1 - 1.3e-70 238.7 0.3 1.5e-70 238.5 0.3 1.0 1 0 0 1 1 1 1 Carboxylesterase family Abhydrolase_3 PF07859.13 RKO84813.1 - 7.7e-05 22.6 1.8 0.00017 21.5 0.1 1.9 2 0 0 2 2 2 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 RKO84813.1 - 0.068 12.6 0.1 0.093 12.2 0.1 1.1 1 0 0 1 1 1 0 Prolyl oligopeptidase family PHD20L1_u1 PF16660.5 RKO84817.1 - 0.0055 17.4 4.6 0.15 12.9 0.0 3.9 4 0 0 4 4 4 1 PHD finger protein 20-like protein 1 SnAC PF14619.6 RKO84817.1 - 0.11 13.1 0.8 17 6.1 0.0 3.1 3 0 0 3 3 3 0 Snf2-ATP coupling, chromatin remodelling complex Actin PF00022.19 RKO84818.1 - 5.4e-17 61.5 0.0 6.1e-17 61.3 0.0 1.0 1 0 0 1 1 1 1 Actin IF4E PF01652.18 RKO84819.1 - 1.2e-51 174.7 3.2 1.5e-51 174.3 3.2 1.1 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E zf-CCHC_2 PF13696.6 RKO84820.1 - 8.6e-09 35.1 6.7 1.9e-08 34.0 6.7 1.6 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC PF00098.23 RKO84820.1 - 1.1e-05 25.2 2.2 1.1e-05 25.2 2.2 1.9 2 0 0 2 2 2 1 Zinc knuckle zf-C3HC4_3 PF13920.6 RKO84820.1 - 0.0019 18.0 6.6 0.0019 18.0 6.6 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 RKO84820.1 - 0.0021 18.2 11.1 0.0041 17.2 11.1 1.5 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 RKO84820.1 - 0.0032 17.8 9.4 0.0032 17.8 9.4 1.6 2 0 0 2 2 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 RKO84820.1 - 0.005 16.7 9.4 0.005 16.7 9.4 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) HrpB2 PF09487.10 RKO84820.1 - 0.012 16.0 1.2 0.026 15.0 0.2 2.1 2 0 0 2 2 1 0 Bacterial type III secretion protein (HrpB2) zf-CCHC_3 PF13917.6 RKO84820.1 - 0.021 14.8 0.2 0.046 13.7 0.2 1.5 1 0 0 1 1 1 0 Zinc knuckle Rad50_zn_hook PF04423.14 RKO84820.1 - 0.18 11.7 0.8 4.1 7.3 0.0 2.3 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-RING_UBOX PF13445.6 RKO84820.1 - 0.2 11.7 6.4 0.23 11.5 5.1 1.8 1 1 0 1 1 1 0 RING-type zinc-finger zf-C3HC4 PF00097.25 RKO84820.1 - 0.21 11.5 10.4 0.41 10.5 10.4 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 RKO84820.1 - 1.6 8.7 15.5 0.075 13.0 8.7 2.0 2 0 0 2 2 2 0 zinc-RING finger domain HSP70 PF00012.20 RKO84821.1 - 6.6e-28 97.3 0.0 7.2e-28 97.1 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein APG6_N PF17675.1 RKO84822.1 - 2.8 8.5 21.0 3.7 8.1 6.2 2.4 2 0 0 2 2 2 0 Apg6 coiled-coil region DUF3138 PF11336.8 RKO84822.1 - 3 6.4 6.6 0.86 8.1 3.5 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3138) Ephrin_rec_like PF07699.13 RKO84823.1 - 1.2e-05 25.0 3.8 3.4e-05 23.5 3.8 1.7 1 0 0 1 1 1 1 Putative ephrin-receptor like G-patch PF01585.23 RKO84826.1 - 2.4e-05 24.1 1.8 4.4e-05 23.3 1.8 1.4 1 0 0 1 1 1 1 G-patch domain G-patch_2 PF12656.7 RKO84826.1 - 0.013 15.6 0.2 0.036 14.2 0.2 1.7 1 0 0 1 1 1 0 G-patch domain GAS2 PF02187.17 RKO84828.1 - 4.5e-11 42.7 0.0 9.6e-11 41.6 0.0 1.6 1 0 0 1 1 1 1 Growth-Arrest-Specific Protein 2 Domain GARP PF16731.5 RKO84828.1 - 0.46 10.1 8.9 2.8 7.6 4.2 2.3 2 0 0 2 2 2 0 Glutamic acid/alanine-rich protein of Trypanosoma LRR_4 PF12799.7 RKO84831.1 - 0.074 13.5 0.1 10 6.7 0.0 2.7 2 0 0 2 2 2 0 Leucine Rich repeats (2 copies) SEEEED PF14797.6 RKO84832.1 - 0.83 9.8 13.4 0.16 12.1 9.8 1.6 2 0 0 2 2 2 0 Serine-rich region of AP3B1, clathrin-adaptor complex RGCC PF15151.6 RKO84832.1 - 4.2 7.6 8.4 2.4 8.4 0.3 2.3 2 0 0 2 2 2 0 Response gene to complement 32 protein family THDPS_M PF14789.6 RKO84833.1 - 0.09 12.9 0.0 5.9 7.1 0.0 2.7 2 0 0 2 2 2 0 Tetrahydrodipicolinate N-succinyltransferase middle DUF4097 PF13349.6 RKO84833.1 - 0.2 11.0 0.0 0.25 10.7 0.0 1.1 1 0 0 1 1 1 0 Putative adhesin FH2 PF02181.23 RKO84836.1 - 4.1e-19 69.0 1.6 9e-15 54.7 0.2 2.0 2 0 0 2 2 2 2 Formin Homology 2 Domain MCC-bdg_PDZ PF10506.9 RKO84836.1 - 0.0089 16.0 0.0 0.36 10.9 0.0 2.2 2 0 0 2 2 2 1 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF4551 PF15087.6 RKO84837.1 - 0.0016 17.4 0.0 0.0019 17.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4551) RasGAP PF00616.19 RKO84838.1 - 1.9e-17 63.7 0.0 1.4e-08 34.8 0.0 2.8 3 0 0 3 3 3 2 GTPase-activator protein for Ras-like GTPase ECM1 PF05782.11 RKO84838.1 - 3.5 6.4 4.9 0.26 10.2 0.2 1.5 2 0 0 2 2 2 0 Extracellular matrix protein 1 (ECM1) PCNA_C PF02747.15 RKO84839.1 - 1.8e-09 37.8 0.1 2.3e-09 37.5 0.1 1.1 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, C-terminal domain L_protein_N PF15518.6 RKO84839.1 - 0.0015 18.3 0.0 0.0021 17.8 0.0 1.3 1 0 0 1 1 1 1 L protein N-terminus DEAD PF00270.29 RKO84841.1 - 4.7e-20 72.1 0.0 7.4e-20 71.4 0.0 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO84841.1 - 0.16 12.3 0.1 0.58 10.5 0.0 1.9 2 0 0 2 2 2 0 Helicase conserved C-terminal domain ResIII PF04851.15 RKO84841.1 - 0.2 11.6 0.0 0.35 10.8 0.0 1.4 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit DNA_pol_E_B PF04042.16 RKO84842.1 - 7e-34 117.0 0.0 9.3e-34 116.6 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Pol_alpha_B_N PF08418.10 RKO84842.1 - 3.5e-06 27.2 0.0 5.9e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase alpha subunit B N-terminal DUF16 PF01519.16 RKO84843.1 - 0.0016 18.9 3.7 0.003 18.0 3.7 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF16 DivIC PF04977.15 RKO84843.1 - 0.0059 16.4 5.0 0.012 15.4 5.0 1.4 1 0 0 1 1 1 1 Septum formation initiator HrpB7 PF09486.10 RKO84843.1 - 0.0074 16.7 5.4 0.014 15.8 5.4 1.4 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB7) Spc29 PF17082.5 RKO84843.1 - 0.0083 16.0 2.3 0.016 15.1 2.3 1.4 1 0 0 1 1 1 1 Spindle Pole Component 29 UPF0242 PF06785.11 RKO84843.1 - 0.11 12.6 6.2 0.18 11.9 6.2 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Atg14 PF10186.9 RKO84843.1 - 0.17 10.9 3.2 0.28 10.2 3.2 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fib_alpha PF08702.10 RKO84843.1 - 0.2 11.8 3.0 0.34 11.1 3.0 1.3 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family SlyX PF04102.12 RKO84843.1 - 0.45 11.2 8.7 0.97 10.1 8.7 1.5 1 0 0 1 1 1 0 SlyX YlqD PF11068.8 RKO84843.1 - 0.53 10.7 7.0 1.8 8.9 5.5 2.0 2 0 0 2 2 2 0 YlqD protein Pkinase PF00069.25 RKO84844.1 - 2.8e-17 62.9 0.0 1.6e-14 53.9 0.0 2.2 2 0 0 2 2 2 2 Protein kinase domain Imm31 PF15591.6 RKO84844.1 - 0.022 14.6 0.2 0.077 12.9 0.0 1.9 2 0 0 2 2 2 0 Immunity protein 31 Alk_phosphatase PF00245.20 RKO84845.1 - 6.4e-48 163.7 0.0 7.8e-48 163.4 0.0 1.1 1 0 0 1 1 1 1 Alkaline phosphatase Metalloenzyme PF01676.18 RKO84845.1 - 0.0063 15.9 0.0 0.0092 15.4 0.0 1.2 1 0 0 1 1 1 1 Metalloenzyme superfamily Noc2 PF03715.13 RKO84847.1 - 8.9e-16 58.0 0.3 1.2e-15 57.6 0.3 1.1 1 0 0 1 1 1 1 Noc2p family TFIIA PF03153.13 RKO84847.1 - 0.035 14.1 14.7 0.045 13.7 14.7 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit AC_N PF16214.5 RKO84847.1 - 0.37 9.9 5.5 0.39 9.8 5.5 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Sporozoite_P67 PF05642.11 RKO84847.1 - 0.9 7.5 5.9 1 7.3 5.9 1.2 1 0 0 1 1 1 0 Sporozoite P67 surface antigen CSN5_C PF18323.1 RKO84847.1 - 0.98 10.4 7.5 20 6.2 7.5 2.2 1 1 0 1 1 1 0 Cop9 signalosome subunit 5 C-terminal domain RXT2_N PF08595.11 RKO84847.1 - 4.6 7.3 14.9 43 4.1 14.9 2.2 1 1 0 1 1 1 0 RXT2-like, N-terminal RR_TM4-6 PF06459.12 RKO84847.1 - 4.9 6.9 9.1 5.9 6.6 9.1 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CDC45 PF02724.14 RKO84847.1 - 5.5 5.2 13.5 6.6 4.9 13.5 1.1 1 0 0 1 1 1 0 CDC45-like protein Ank_4 PF13637.6 RKO84848.1 - 2.8e-07 31.0 0.4 0.00036 21.0 0.1 3.5 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO84848.1 - 1.1e-05 25.9 0.1 0.0042 17.7 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO84848.1 - 3.6e-05 24.0 0.1 0.53 10.7 0.0 3.5 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO84848.1 - 0.06 13.9 0.2 1.5e+02 3.5 0.0 4.0 5 0 0 5 5 5 0 Ankyrin repeat PGA2 PF07543.12 RKO84848.1 - 0.18 11.8 2.9 0.44 10.5 2.9 1.6 1 0 0 1 1 1 0 Protein trafficking PGA2 IQ PF00612.27 RKO84850.1 - 2.3e-06 26.9 21.9 0.00098 18.7 0.4 4.4 4 0 0 4 4 4 3 IQ calmodulin-binding motif Pkinase PF00069.25 RKO84851.1 - 0.00043 19.7 0.0 0.00071 19.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain APH PF01636.23 RKO84851.1 - 0.0058 16.6 0.0 0.012 15.5 0.0 1.6 1 0 0 1 1 1 1 Phosphotransferase enzyme family GST_N_3 PF13417.6 RKO84852.1 - 1.1e-17 64.2 0.0 1.6e-16 60.4 0.0 2.1 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 RKO84852.1 - 2e-15 56.9 0.0 4.4e-15 55.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 RKO84852.1 - 1.2e-12 48.0 0.0 2.1e-12 47.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 RKO84852.1 - 4.2e-11 42.9 0.0 7e-11 42.2 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 RKO84852.1 - 1.1e-05 25.3 0.1 2.3e-05 24.3 0.1 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 RKO84852.1 - 0.0038 17.4 0.0 0.0069 16.5 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_5 PF18485.1 RKO84852.1 - 0.034 14.5 0.0 0.067 13.6 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain NLPC_P60 PF00877.19 RKO84853.1 - 0.2 11.7 0.0 2.3 8.3 0.0 2.1 2 0 0 2 2 2 0 NlpC/P60 family Glyco_hydro_35 PF01301.19 RKO84854.1 - 1.3e-50 172.8 0.3 1.5e-50 172.6 0.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 35 Glyco_hydro_42 PF02449.15 RKO84854.1 - 3.6e-09 36.4 0.0 4.4e-09 36.2 0.0 1.1 1 0 0 1 1 1 1 Beta-galactosidase Cellulase PF00150.18 RKO84854.1 - 6.5e-06 25.8 0.0 6.7e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) Aldo_ket_red PF00248.21 RKO84856.1 - 1.8e-66 224.3 0.0 2.1e-66 224.1 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family PNP_UDP_1 PF01048.20 RKO84860.1 - 6.6e-20 71.4 0.8 5e-19 68.5 0.4 2.4 1 1 1 2 2 2 1 Phosphorylase superfamily WD40 PF00400.32 RKO84861.1 - 1.2e-05 25.9 0.3 2.2e-05 25.1 0.3 1.4 1 0 0 1 1 1 1 WD domain, G-beta repeat 4HBT_2 PF13279.6 RKO84863.1 - 2e-05 25.0 0.0 2.2e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Thioesterase-like superfamily SnoaL_3 PF13474.6 RKO84863.1 - 0.075 13.3 0.3 0.2 11.9 0.3 1.8 1 1 0 1 1 1 0 SnoaL-like domain GON PF08685.11 RKO84864.1 - 3.6e-07 30.2 0.0 9e-07 29.0 0.0 1.6 1 1 0 1 1 1 1 GON domain Complex1_LYR_2 PF13233.6 RKO84865.1 - 3e-13 50.3 0.1 3.3e-13 50.2 0.1 1.1 1 0 0 1 1 1 1 Complex1_LYR-like Complex1_LYR PF05347.15 RKO84865.1 - 4.6e-05 23.4 2.4 0.00092 19.2 0.9 2.1 1 1 1 2 2 2 2 Complex 1 protein (LYR family) DUF3482 PF11981.8 RKO84865.1 - 0.035 13.5 0.0 0.036 13.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3482) bVLRF1 PF18826.1 RKO84866.1 - 1.4e-57 193.8 0.5 2.4e-57 193.0 0.5 1.4 1 0 0 1 1 1 1 bacteroidetes VLRF1 release factor VATC PF18716.1 RKO84866.1 - 6.7e-08 32.3 0.8 1.3e-07 31.3 0.8 1.4 1 0 0 1 1 1 1 Vms1-associating treble clef domain Ank_4 PF13637.6 RKO84866.1 - 2.7e-06 27.8 0.0 6.2e-06 26.7 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO84866.1 - 8.1e-06 26.3 0.0 1.6e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 RKO84866.1 - 4.2e-05 23.8 1.0 9.6e-05 22.7 0.2 2.0 2 0 0 2 2 2 1 Ankyrin repeat Ank_3 PF13606.6 RKO84866.1 - 9.7e-05 22.5 0.0 0.015 15.8 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeat Ank_5 PF13857.6 RKO84866.1 - 0.0001 22.5 0.0 0.0014 18.9 0.0 2.4 1 1 1 2 2 2 1 Ankyrin repeats (many copies) PLATZ PF04640.14 RKO84866.1 - 0.015 15.9 0.8 0.015 15.9 0.8 2.2 2 0 0 2 2 2 0 PLATZ transcription factor OPT PF03169.15 RKO84868.1 - 4.9e-20 71.7 0.0 6.4e-20 71.3 0.0 1.1 1 0 0 1 1 1 1 OPT oligopeptide transporter protein Amelin PF05111.12 RKO84869.1 - 0.094 11.8 0.2 0.12 11.5 0.2 1.1 1 0 0 1 1 1 0 Ameloblastin precursor (Amelin) A_deaminase PF00962.22 RKO84871.1 - 1.7e-25 90.1 0.0 2.6e-25 89.5 0.0 1.2 1 0 0 1 1 1 1 Adenosine/AMP deaminase A_deaminase_N PF08451.11 RKO84871.1 - 0.057 13.7 0.0 0.09 13.1 0.0 1.3 1 0 0 1 1 1 0 Adenosine/AMP deaminase N-terminal OCRE PF17780.1 RKO84874.1 - 0.037 14.0 0.2 0.085 12.9 0.2 1.5 1 0 0 1 1 1 0 OCRE domain Cpn60_TCP1 PF00118.24 RKO84875.1 - 2.6e-20 72.5 0.0 3.3e-20 72.2 0.0 1.1 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family AC_N PF16214.5 RKO84878.1 - 2.3 7.3 4.1 2.7 7.0 4.1 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region Cytochrom_B561 PF03188.16 RKO84879.1 - 4.9e-22 78.5 5.9 9.7e-22 77.6 5.9 1.5 1 0 0 1 1 1 1 Eukaryotic cytochrome b561 PSII PF00421.19 RKO84879.1 - 0.025 13.3 1.4 0.03 13.0 1.4 1.1 1 0 0 1 1 1 0 Photosystem II protein DUF4079 PF13301.6 RKO84879.1 - 0.058 13.5 5.7 0.17 12.0 5.7 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) Abhydrolase_9_N PF15420.6 RKO84879.1 - 0.085 12.9 5.7 0.026 14.5 1.5 2.0 1 1 1 2 2 2 0 Alpha/beta-hydrolase family N-terminus Formyl_trans_N PF00551.19 RKO84881.1 - 1.9e-24 86.4 0.0 3e-24 85.8 0.0 1.2 1 0 0 1 1 1 1 Formyl transferase Formyl_trans_C PF02911.18 RKO84881.1 - 4.6e-13 49.3 0.0 7e-13 48.7 0.0 1.3 1 0 0 1 1 1 1 Formyl transferase, C-terminal domain Lyase_1 PF00206.20 RKO84882.1 - 3.2e-10 39.9 0.0 4e-10 39.6 0.0 1.1 1 0 0 1 1 1 1 Lyase SLATT_2 PF18183.1 RKO84883.1 - 0.0018 18.1 0.0 0.0035 17.2 0.0 1.4 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain 2 Aldolase_II PF00596.21 RKO84885.1 - 9.4e-26 90.9 0.0 1.2e-25 90.5 0.0 1.1 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Sel1 PF08238.12 RKO84886.1 - 1.2e-24 86.2 5.2 3e-07 30.9 0.0 5.1 5 0 0 5 5 5 3 Sel1 repeat TPR_6 PF13174.6 RKO84886.1 - 0.047 14.3 7.3 32 5.5 0.2 4.6 5 0 0 5 5 5 0 Tetratricopeptide repeat PrmC_N PF17827.1 RKO84886.1 - 0.08 13.5 0.0 0.29 11.7 0.0 1.9 2 0 0 2 2 2 0 PrmC N-terminal domain TPR_16 PF13432.6 RKO84886.1 - 0.32 11.7 9.5 0.42 11.3 0.3 4.1 2 2 1 3 3 3 0 Tetratricopeptide repeat LRR_9 PF14580.6 RKO84887.1 - 3.1e-14 52.9 1.0 1.2e-12 47.7 1.0 2.2 1 1 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 RKO84887.1 - 7.5e-08 32.6 6.5 0.001 19.4 1.0 3.7 1 1 4 5 5 5 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO84887.1 - 3.2e-06 26.8 8.1 0.00055 19.6 4.1 3.5 1 1 3 4 4 4 3 Leucine rich repeat CS PF04969.16 RKO84887.1 - 0.02 15.9 0.0 0.051 14.6 0.0 1.6 1 0 0 1 1 1 0 CS domain LRR_6 PF13516.6 RKO84887.1 - 0.068 13.3 1.2 15 5.9 0.1 3.8 4 0 0 4 4 4 0 Leucine Rich repeat LRR_6 PF13516.6 RKO84889.1 - 9.3e-14 50.2 19.2 2.1e-06 27.3 0.7 6.1 7 0 0 7 7 7 3 Leucine Rich repeat LRR_4 PF12799.7 RKO84889.1 - 9.8e-08 32.2 6.6 8.9e-05 22.8 2.9 2.7 2 0 0 2 2 2 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 RKO84889.1 - 3.8e-05 23.7 5.6 3.2 8.6 0.1 5.3 5 1 0 5 5 5 2 Leucine Rich Repeat LRR_8 PF13855.6 RKO84889.1 - 0.66 9.8 10.6 0.061 13.1 2.6 3.1 3 2 1 4 4 4 0 Leucine rich repeat Glyco_hydro_18 PF00704.28 RKO84891.1 - 1.7e-68 231.7 6.9 3.4e-58 197.8 1.6 2.3 2 1 0 2 2 2 2 Glycosyl hydrolases family 18 Btz PF09405.10 RKO84892.1 - 0.094 13.0 0.1 0.16 12.2 0.1 1.3 1 0 0 1 1 1 0 CASC3/Barentsz eIF4AIII binding FixS PF03597.15 RKO84894.1 - 6.7 6.5 7.6 5.9 6.7 3.3 2.8 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type DNA_methylase PF00145.17 RKO84896.1 - 2.8e-14 53.2 0.0 3.4e-14 52.9 0.0 1.1 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase VTC PF09359.10 RKO84898.1 - 2.7e-99 332.0 0.1 3.9e-99 331.5 0.1 1.2 1 0 0 1 1 1 1 VTC domain SPX PF03105.19 RKO84898.1 - 1.5e-16 61.4 20.3 1.2e-07 32.1 1.4 4.1 3 1 2 5 5 5 3 SPX domain DUF202 PF02656.15 RKO84898.1 - 4.1e-16 59.2 2.1 9.7e-16 58.0 2.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF202) L_HMGIC_fpl PF10242.9 RKO84898.1 - 0.079 13.2 0.0 0.38 10.9 0.0 1.9 2 0 0 2 2 2 0 Lipoma HMGIC fusion partner-like protein MARVEL PF01284.23 RKO84898.1 - 0.2 11.7 3.5 0.34 11.0 3.5 1.3 1 0 0 1 1 1 0 Membrane-associating domain GDC-P PF02347.16 RKO84899.1 - 2.2e-107 359.6 0.3 5.4e-99 331.9 0.0 2.4 2 1 0 2 2 2 2 Glycine cleavage system P-protein Aminotran_5 PF00266.19 RKO84899.1 - 5.1e-07 29.0 0.1 6.4e-05 22.1 0.0 2.3 2 0 0 2 2 2 2 Aminotransferase class-V Beta_elim_lyase PF01212.21 RKO84899.1 - 1.5e-05 24.5 0.1 3.5e-05 23.2 0.0 1.6 2 0 0 2 2 2 1 Beta-eliminating lyase MFS_1 PF07690.16 RKO84901.1 - 6.2e-23 81.3 28.5 6.2e-23 81.3 28.5 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_2 PF13347.6 RKO84901.1 - 2.5e-11 42.8 12.4 3.2e-11 42.4 0.1 2.9 1 1 1 3 3 3 2 MFS/sugar transport protein Nuc_H_symport PF03825.16 RKO84901.1 - 0.00014 21.0 0.4 0.005 15.9 0.2 2.2 1 1 1 2 2 2 2 Nucleoside H+ symporter OppC_N PF12911.7 RKO84901.1 - 0.032 14.2 6.6 0.2 11.6 0.2 4.3 4 0 0 4 4 4 0 N-terminal TM domain of oligopeptide transport permease C PTR2 PF00854.21 RKO84901.1 - 0.033 13.0 0.3 0.033 13.0 0.3 2.1 2 0 0 2 2 2 0 POT family OATP PF03137.20 RKO84901.1 - 0.035 12.4 3.7 0.031 12.6 1.8 1.8 2 1 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family Sugar_tr PF00083.24 RKO84901.1 - 0.41 9.5 20.6 0.14 11.0 4.0 2.8 2 2 0 2 2 2 0 Sugar (and other) transporter MFS_1_like PF12832.7 RKO84901.1 - 1.4 7.6 8.1 0.18 10.6 1.0 2.5 2 1 2 4 4 4 0 MFS_1 like family Amino_oxidase PF01593.24 RKO84903.1 - 6.9e-36 124.5 0.0 8.1e-36 124.3 0.0 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 RKO84903.1 - 3.7e-13 49.5 0.1 8e-13 48.4 0.1 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 RKO84903.1 - 7.6e-06 25.3 0.1 1.5e-05 24.4 0.1 1.5 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 RKO84903.1 - 0.00017 21.3 0.5 0.00034 20.3 0.5 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 RKO84903.1 - 0.00072 18.9 1.4 0.018 14.3 0.1 2.9 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 RKO84903.1 - 0.00097 18.3 0.5 0.0093 15.1 0.2 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 RKO84903.1 - 0.34 9.7 1.4 0.57 9.0 1.4 1.3 1 0 0 1 1 1 0 Tryptophan halogenase WW PF00397.26 RKO84904.1 - 6.9e-05 22.9 1.2 0.00014 21.9 1.2 1.5 1 0 0 1 1 1 1 WW domain SR-25 PF10500.9 RKO84906.1 - 1.6e-05 24.6 9.4 1.6e-05 24.6 9.4 2.1 2 0 0 2 2 2 1 Nuclear RNA-splicing-associated protein CCDC106 PF15794.5 RKO84906.1 - 0.73 9.5 10.7 0.021 14.6 3.2 1.9 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 106 Nodulin-like PF06813.13 RKO84908.1 - 1.5e-21 77.0 8.6 1.5e-21 77.0 8.6 1.7 2 0 0 2 2 2 1 Nodulin-like MFS_1 PF07690.16 RKO84908.1 - 4.4e-09 35.7 31.4 9.1e-09 34.7 31.4 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily DUF3611 PF12263.8 RKO84908.1 - 0.058 13.3 0.5 0.058 13.3 0.5 2.8 4 0 0 4 4 4 0 Protein of unknown function (DUF3611) EMP70 PF02990.16 RKO84908.1 - 1.2 7.8 5.6 1.8 7.1 5.6 1.3 1 0 0 1 1 1 0 Endomembrane protein 70 TssN PF17555.2 RKO84908.1 - 2.4 7.5 7.5 3.8 6.8 7.5 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssN Arf PF00025.21 RKO84909.1 - 3.5e-78 261.0 0.1 4.1e-78 260.8 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 RKO84909.1 - 5.7e-14 52.4 0.0 7.5e-14 52.0 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 RKO84909.1 - 5.9e-13 48.7 1.0 4.4e-09 36.0 0.2 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Ras PF00071.22 RKO84909.1 - 9.4e-13 48.1 0.0 1e-12 47.9 0.0 1.0 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 RKO84909.1 - 1.2e-12 47.7 0.0 1.4e-12 47.4 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 RKO84909.1 - 9.3e-10 38.2 0.0 1.2e-09 37.9 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 RKO84909.1 - 1.6e-05 25.0 0.0 2.3e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 RKO84909.1 - 0.011 15.1 0.2 0.028 13.7 0.1 1.6 2 0 0 2 2 2 0 6-phosphofructo-2-kinase SNF2_N PF00176.23 RKO84910.1 - 1.4e-25 89.8 0.2 7.2e-25 87.4 0.2 1.9 1 1 0 1 1 1 1 SNF2 family N-terminal domain Chromo PF00385.24 RKO84910.1 - 7.5e-14 51.4 7.9 2.8e-06 27.2 0.1 3.6 3 0 0 3 3 3 3 Chromo (CHRromatin Organisation MOdifier) domain ResIII PF04851.15 RKO84910.1 - 1.1e-07 32.0 0.0 2.4e-07 30.9 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 RKO84910.1 - 1.5e-05 24.9 0.0 2.5e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase PHD PF00628.29 RKO84910.1 - 0.027 14.4 9.6 0.061 13.2 9.6 1.6 1 0 0 1 1 1 0 PHD-finger FYVE_2 PF02318.16 RKO84910.1 - 0.072 13.3 1.5 0.19 11.9 1.5 1.7 1 0 0 1 1 1 0 FYVE-type zinc finger AAA_34 PF13872.6 RKO84910.1 - 0.14 11.1 0.0 0.38 9.6 0.0 1.7 1 1 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 C1_1 PF00130.22 RKO84910.1 - 0.65 9.9 6.9 0.038 13.9 1.1 1.9 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Nop14 PF04147.12 RKO84910.1 - 3.3 5.8 19.0 4.5 5.4 19.0 1.2 1 0 0 1 1 1 0 Nop14-like family DUF1688 PF07958.11 RKO84911.1 - 2.1e-150 501.1 0.0 2.4e-150 500.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1688) Q_salvage PF10343.9 RKO84911.1 - 0.00062 19.4 0.0 0.011 15.3 0.0 2.0 2 0 0 2 2 2 1 Potential Queuosine, Q, salvage protein family Peptidase_S10 PF00450.22 RKO84912.1 - 1.4e-34 120.2 1.1 1.5e-34 120.1 1.1 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase HA2 PF04408.23 RKO84913.1 - 4.3e-25 88.1 0.0 7.9e-25 87.2 0.0 1.4 1 0 0 1 1 1 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 RKO84913.1 - 1.2e-16 60.8 0.0 2.4e-16 59.9 0.0 1.5 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 RKO84913.1 - 2.3e-12 47.3 0.0 5.6e-12 46.0 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain NgoMIV_restric PF09015.10 RKO84913.1 - 0.022 13.9 0.0 0.036 13.2 0.0 1.2 1 0 0 1 1 1 0 NgoMIV restriction enzyme DUF2398 PF09661.10 RKO84913.1 - 0.083 12.1 0.1 0.13 11.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2398) S1-P1_nuclease PF02265.16 RKO84914.1 - 3.9e-51 174.3 0.0 4.3e-51 174.2 0.0 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease DUF3493 PF11998.8 RKO84916.1 - 0.013 15.7 0.1 0.038 14.1 0.1 1.8 1 0 0 1 1 1 0 Low psii accumulation1 / Rep27 PMSR PF01625.21 RKO84916.1 - 0.21 11.7 0.0 0.35 11.0 0.0 1.3 1 0 0 1 1 1 0 Peptide methionine sulfoxide reductase LRR_9 PF14580.6 RKO84920.1 - 4.1e-17 62.2 4.0 4.1e-17 62.2 4.0 3.3 2 2 2 4 4 4 2 Leucine-rich repeat LRR_4 PF12799.7 RKO84920.1 - 2.1e-15 56.6 32.1 1.7e-08 34.6 4.2 3.8 4 0 0 4 4 4 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO84920.1 - 1.2e-11 44.2 24.5 3.8e-09 36.2 9.3 4.1 3 2 1 4 4 4 3 Leucine rich repeat V-ATPase_G_2 PF16999.5 RKO84920.1 - 0.061 13.8 0.3 0.061 13.8 0.3 2.8 3 0 0 3 3 3 0 Vacuolar (H+)-ATPase G subunit PSDC PF12588.8 RKO84920.1 - 0.22 11.5 2.2 0.48 10.4 0.3 2.4 2 0 0 2 2 2 0 Phophatidylserine decarboxylase ArdA PF07275.11 RKO84920.1 - 0.96 10.0 6.7 0.17 12.4 1.8 2.3 2 1 0 2 2 2 0 Antirestriction protein (ArdA) DNA_repr_REX1B PF14966.6 RKO84921.1 - 4e-26 91.5 3.0 4e-26 91.5 3.0 1.7 2 0 0 2 2 2 1 DNA repair REX1-B DUF1400 PF07176.11 RKO84921.1 - 0.007 16.7 1.5 0.011 16.1 1.5 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1400) NPV_P10 PF05531.12 RKO84921.1 - 0.0092 16.4 1.4 4.7 7.8 0.1 2.3 2 0 0 2 2 2 2 Nucleopolyhedrovirus P10 protein TarH PF02203.15 RKO84921.1 - 0.014 15.3 1.5 0.024 14.6 1.4 1.5 1 1 0 1 1 1 0 Tar ligand binding domain homologue Baculo_PEP_C PF04513.12 RKO84921.1 - 0.017 15.2 2.1 0.022 14.8 1.7 1.4 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus HAUS-augmin3 PF14932.6 RKO84921.1 - 0.02 14.5 7.8 0.023 14.3 7.8 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Aida_N PF08910.10 RKO84921.1 - 0.033 14.6 2.6 3.6 8.0 2.6 2.2 1 1 0 1 1 1 0 Aida N-terminus DUF3416 PF11896.8 RKO84921.1 - 0.13 12.5 0.7 0.18 12.0 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3416) Focal_AT PF03623.13 RKO84921.1 - 0.16 11.9 2.6 0.71 9.9 2.2 2.0 1 1 0 1 1 1 0 Focal adhesion targeting region ATP-cone PF03477.16 RKO84921.1 - 0.18 12.4 2.3 0.2 12.2 0.9 1.9 1 1 1 2 2 2 0 ATP cone domain CdvA PF18822.1 RKO84921.1 - 0.19 11.6 9.1 0.96 9.3 0.4 2.6 1 1 0 2 2 2 0 CdvA-like coiled-coil domain FAM76 PF16046.5 RKO84921.1 - 0.27 10.6 3.4 0.29 10.5 3.4 1.0 1 0 0 1 1 1 0 FAM76 protein Duffy_binding PF05424.11 RKO84921.1 - 0.64 10.0 3.1 30 4.6 3.1 2.1 1 1 0 1 1 1 0 Duffy binding domain DUF4404 PF14357.6 RKO84921.1 - 1 10.1 7.4 14 6.4 4.3 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF4404) ADH_zinc_N PF00107.26 RKO84922.1 - 7.6e-25 87.4 0.6 1e-24 87.0 0.6 1.1 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 RKO84922.1 - 0.0012 19.9 0.0 0.0022 19.1 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ACP_syn_III_C PF08541.10 RKO84922.1 - 0.0031 17.6 0.2 0.01 16.0 0.1 1.9 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AlaDh_PNT_C PF01262.21 RKO84922.1 - 0.066 12.5 1.4 0.092 12.0 1.4 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain AflR PF08493.10 RKO84923.1 - 7.6 5.9 9.2 9.6 5.6 9.2 1.1 1 0 0 1 1 1 0 Aflatoxin regulatory protein TPPII_N PF12583.8 RKO84923.1 - 8.2 7.0 16.3 11 6.6 16.3 1.2 1 0 0 1 1 1 0 Tripeptidyl peptidase II N terminal Pyr_redox_2 PF07992.14 RKO84924.1 - 1e-20 74.2 0.3 8.1e-18 64.7 0.4 2.0 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 RKO84924.1 - 2.5e-07 30.3 0.1 1.6e-05 24.3 0.0 2.5 2 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 RKO84924.1 - 0.0025 18.4 0.1 0.0072 16.9 0.0 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 RKO84924.1 - 0.021 15.2 0.0 0.046 14.2 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding SelP_N PF04592.14 RKO84925.1 - 0.27 10.6 3.3 0.4 10.1 3.3 1.2 1 0 0 1 1 1 0 Selenoprotein P, N terminal region S4 PF01479.25 RKO84928.1 - 5.9e-13 48.3 2.5 1.3e-12 47.2 0.7 2.5 2 0 0 2 2 2 1 S4 domain Ribosomal_S4 PF00163.19 RKO84928.1 - 1.3e-05 26.0 1.0 2.5e-05 25.1 1.0 1.8 1 1 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain FAS_meander PF17951.1 RKO84929.1 - 1.3e-38 132.1 0.0 1.4e-37 128.7 0.0 2.4 3 0 0 3 3 3 1 Fatty acid synthase meander beta sheet domain DUF1729 PF08354.10 RKO84929.1 - 5.9e-33 114.2 0.1 8.6e-33 113.7 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1729) Acyl_transf_1 PF00698.21 RKO84929.1 - 6.9e-30 104.6 0.3 9.8e-30 104.1 0.3 1.2 1 0 0 1 1 1 1 Acyl transferase domain MaoC_dehydratas PF01575.19 RKO84929.1 - 8e-29 99.7 0.1 4.6e-28 97.3 0.0 2.3 2 0 0 2 2 2 1 MaoC like domain MaoC_dehydrat_N PF13452.6 RKO84929.1 - 1.1e-12 48.2 0.0 4.7e-12 46.2 0.0 2.1 2 0 0 2 2 2 1 N-terminal half of MaoC dehydratase PH_10 PF15411.6 RKO84930.1 - 0.02 15.1 0.0 0.037 14.3 0.0 1.5 1 0 0 1 1 1 0 Pleckstrin homology domain BTV_NS2 PF04514.12 RKO84932.1 - 0.13 11.1 0.3 0.19 10.6 0.3 1.1 1 0 0 1 1 1 0 Bluetongue virus non-structural protein NS2 Translin PF01997.16 RKO84933.1 - 1.6e-41 142.5 0.2 2.1e-41 142.2 0.2 1.1 1 0 0 1 1 1 1 Translin family CHCH PF06747.13 RKO84934.1 - 7.8e-08 32.3 1.5 1.4e-07 31.4 1.5 1.5 1 0 0 1 1 1 1 CHCH domain GCK PF07802.11 RKO84934.1 - 0.027 14.9 0.5 0.032 14.7 0.5 1.2 1 0 0 1 1 1 0 GCK domain UMP1 PF05348.11 RKO84935.1 - 0.29 11.4 8.0 4.3 7.6 0.1 3.3 2 1 0 3 3 3 0 Proteasome maturation factor UMP1 Pex14_N PF04695.13 RKO84936.1 - 0.99 10.0 3.4 0.5 11.0 0.6 1.9 2 0 0 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region CRAL_TRIO PF00650.20 RKO84940.1 - 2.7e-16 59.7 0.0 3e-16 59.6 0.0 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain NTP_transferase PF00483.23 RKO84941.1 - 1.2e-52 179.0 0.0 1.4e-52 178.8 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 RKO84941.1 - 2.1e-11 43.1 9.0 5.9e-09 35.3 3.0 3.5 3 1 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 RKO84941.1 - 7e-11 42.7 0.0 8.9e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.6 RKO84941.1 - 0.0011 18.7 3.6 0.0049 16.6 1.7 2.8 2 1 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 RKO84941.1 - 0.051 13.3 0.0 0.098 12.4 0.0 1.5 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF4954 PF16314.5 RKO84941.1 - 0.13 10.3 0.2 0.18 9.9 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) Reo_sigmaC_M PF17750.1 RKO84941.1 - 0.16 11.9 0.0 0.39 10.6 0.0 1.6 1 0 0 1 1 1 0 Reovirus sigma C capsid protein triple beta spiral CTP_transf_3 PF02348.19 RKO84941.1 - 0.2 11.6 0.0 0.31 10.9 0.0 1.2 1 0 0 1 1 1 0 Cytidylyltransferase SAPS PF04499.15 RKO84944.1 - 3.1e-67 227.4 0.0 9.1e-36 123.7 0.0 2.1 2 0 0 2 2 2 2 SIT4 phosphatase-associated protein Response_reg PF00072.24 RKO84946.1 - 2.3e-08 34.2 0.1 1e-07 32.1 0.0 2.1 2 1 0 2 2 2 1 Response regulator receiver domain SURF1 PF02104.15 RKO84947.1 - 0.12 12.6 0.0 0.13 12.5 0.0 1.1 1 0 0 1 1 1 0 SURF1 family FAD_binding_6 PF00970.24 RKO84948.1 - 8e-10 39.0 0.0 1.6e-09 38.0 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain SH3_9 PF14604.6 RKO84948.1 - 3.3e-09 36.5 0.0 1.4e-08 34.5 0.0 2.0 2 0 0 2 2 2 1 Variant SH3 domain SH3_1 PF00018.28 RKO84948.1 - 9.4e-08 31.5 0.0 5.6e-07 29.1 0.0 2.1 2 0 0 2 2 2 1 SH3 domain NAD_binding_1 PF00175.21 RKO84948.1 - 4.7e-06 27.2 0.0 0.036 14.7 0.1 2.5 2 1 0 2 2 2 2 Oxidoreductase NAD-binding domain SH3_2 PF07653.17 RKO84948.1 - 0.017 14.8 0.0 0.041 13.6 0.0 1.7 1 0 0 1 1 1 0 Variant SH3 domain AAA_11 PF13086.6 RKO84949.1 - 9.6e-28 97.7 0.3 2.4e-14 53.7 0.0 2.3 1 1 0 2 2 2 2 AAA domain AAA_30 PF13604.6 RKO84949.1 - 1.4e-13 51.0 0.0 2.4e-13 50.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 RKO84949.1 - 1.4e-10 41.6 0.0 4.4e-10 40.1 0.0 1.8 2 0 0 2 2 2 1 AAA domain ResIII PF04851.15 RKO84949.1 - 7.7e-07 29.3 0.2 4.5e-06 26.8 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit UvrD-helicase PF00580.21 RKO84949.1 - 8.6e-07 28.8 0.0 4.5e-05 23.1 0.0 2.1 2 0 0 2 2 2 1 UvrD/REP helicase N-terminal domain PhoH PF02562.16 RKO84949.1 - 0.0085 15.6 0.0 0.11 12.0 0.0 2.1 1 1 0 1 1 1 1 PhoH-like protein Helicase_RecD PF05127.14 RKO84949.1 - 0.01 15.7 0.0 0.018 14.9 0.0 1.4 1 0 0 1 1 1 0 Helicase Viral_helicase1 PF01443.18 RKO84949.1 - 0.016 15.0 0.0 0.84 9.3 0.0 2.3 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase T2SSE PF00437.20 RKO84949.1 - 0.019 14.0 0.0 0.035 13.2 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_22 PF13401.6 RKO84949.1 - 0.023 15.0 0.0 0.046 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 RKO84949.1 - 0.043 13.7 0.0 0.075 12.9 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea PIF1 PF05970.14 RKO84949.1 - 0.059 12.5 0.0 0.096 11.8 0.0 1.3 1 0 0 1 1 1 0 PIF1-like helicase AAA PF00004.29 RKO84949.1 - 0.073 13.5 0.0 0.15 12.4 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 RKO84949.1 - 0.16 11.7 0.0 0.31 10.8 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 RKO84949.1 - 0.19 12.1 0.0 0.37 11.1 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain Glyco_hydro_28 PF00295.17 RKO84950.1 - 1.1e-25 90.4 14.4 9.4e-25 87.3 14.4 2.6 1 1 0 1 1 1 1 Glycosyl hydrolases family 28 Pectate_lyase_3 PF12708.7 RKO84950.1 - 0.0039 17.1 6.9 0.53 10.1 0.1 2.5 1 1 1 2 2 2 2 Pectate lyase superfamily protein MVL PF12151.8 RKO84952.1 - 0.33 10.8 1.3 0.84 9.5 1.3 1.6 1 0 0 1 1 1 0 Mannan-binding protein Chibby PF14645.6 RKO84953.1 - 9e-14 51.9 0.0 1e-13 51.7 0.0 1.1 1 0 0 1 1 1 1 Chibby family Mating_C PF12737.7 RKO84953.1 - 0.023 13.9 0.1 0.027 13.7 0.1 1.1 1 0 0 1 1 1 0 C-terminal domain of homeodomain 1 TSC22 PF01166.18 RKO84953.1 - 0.041 14.2 0.1 0.067 13.5 0.1 1.3 1 0 0 1 1 1 0 TSC-22/dip/bun family HSF_DNA-bind PF00447.17 RKO84954.1 - 1.8e-32 111.8 0.1 3.3e-32 111.0 0.1 1.4 1 0 0 1 1 1 1 HSF-type DNA-binding Methyltransf_32 PF13679.6 RKO84955.1 - 8.3e-26 90.9 0.2 1.1e-25 90.4 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO84955.1 - 0.016 15.0 0.2 0.026 14.3 0.2 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 RKO84955.1 - 0.018 15.8 0.0 0.074 13.8 0.0 2.1 2 0 0 2 2 2 0 Methyltransferase domain MTS PF05175.14 RKO84955.1 - 0.019 14.5 0.0 0.033 13.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain PCMT PF01135.19 RKO84955.1 - 0.034 13.9 0.0 0.069 12.9 0.0 1.5 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PrmA PF06325.13 RKO84955.1 - 0.14 11.5 0.1 0.2 11.0 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) MULE PF10551.9 RKO84956.1 - 1.4e-05 25.4 0.3 9e-05 22.8 0.3 1.9 1 1 0 1 1 1 1 MULE transposase domain AhpC-TSA PF00578.21 RKO84958.1 - 9.9e-30 103.0 0.0 1.3e-29 102.6 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 RKO84958.1 - 7.3e-14 51.7 0.0 1.2e-13 51.0 0.0 1.3 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 RKO84958.1 - 9.6e-10 38.2 0.0 2.2e-09 37.0 0.0 1.7 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin AhpC-TSA_2 PF13911.6 RKO84958.1 - 0.023 14.8 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 AhpC/TSA antioxidant enzyme GSHPx PF00255.19 RKO84958.1 - 0.11 12.1 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Glutathione peroxidase DEAD PF00270.29 RKO84960.1 - 3.7e-12 46.4 0.1 4.6e-12 46.1 0.1 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase NAD_binding_10 PF13460.6 RKO84960.1 - 0.079 12.8 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H-binding SecA_DEAD PF07517.14 RKO84960.1 - 0.24 10.7 0.2 2.4 7.4 0.1 2.0 1 1 1 2 2 2 0 SecA DEAD-like domain WD40 PF00400.32 RKO84964.1 - 3.4e-17 62.5 7.2 0.028 15.3 0.7 7.3 7 0 0 7 7 7 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO84964.1 - 6.5e-05 23.2 0.0 0.31 11.4 0.0 3.9 3 1 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Nucleoporin_N PF08801.11 RKO84964.1 - 0.0011 17.8 0.0 2.3 6.9 0.0 3.2 3 0 0 3 3 3 3 Nup133 N terminal like Nup160 PF11715.8 RKO84964.1 - 0.035 12.8 1.4 2.5 6.7 0.1 2.6 3 0 0 3 3 3 0 Nucleoporin Nup120/160 Motile_Sperm PF00635.26 RKO84968.1 - 1.1e-12 47.8 0.0 1.7e-12 47.1 0.0 1.3 1 0 0 1 1 1 1 MSP (Major sperm protein) domain Rhomboid PF01694.22 RKO84970.1 - 7.6e-10 39.0 15.9 0.00017 21.6 0.7 2.9 2 1 0 2 2 2 2 Rhomboid family APH PF01636.23 RKO84971.1 - 2e-14 54.1 0.3 1.2e-12 48.3 0.3 2.1 1 1 0 1 1 1 1 Phosphotransferase enzyme family ATP19 PF11022.8 RKO84972.1 - 0.0015 18.8 0.0 0.002 18.5 0.0 1.1 1 0 0 1 1 1 1 ATP synthase subunit K Alpha-amylase PF00128.24 RKO84974.1 - 7.9e-57 193.3 0.1 1.1e-56 192.8 0.1 1.2 1 0 0 1 1 1 1 Alpha amylase, catalytic domain DUF1966 PF09260.11 RKO84974.1 - 5.4e-08 33.0 0.2 1.9e-07 31.3 0.2 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1966) Alpha-amylase_C PF02806.18 RKO84974.1 - 0.057 13.9 0.1 0.2 12.2 0.1 2.0 1 0 0 1 1 1 0 Alpha amylase, C-terminal all-beta domain AKAP28 PF14469.6 RKO84978.1 - 1.9e-05 24.4 0.1 3e-05 23.8 0.1 1.3 1 0 0 1 1 1 1 28 kDa A-kinase anchor Thymidylate_kin PF02223.17 RKO84979.1 - 1.8e-40 138.6 0.0 2.1e-40 138.4 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase CPT PF07931.12 RKO84979.1 - 3.8e-05 23.6 0.1 7.6e-05 22.6 0.0 1.6 2 0 0 2 2 2 1 Chloramphenicol phosphotransferase-like protein ADK PF00406.22 RKO84979.1 - 0.012 15.7 0.0 0.018 15.1 0.0 1.2 1 0 0 1 1 1 0 Adenylate kinase CLP1_P PF16575.5 RKO84979.1 - 0.06 13.1 0.0 0.74 9.6 0.0 2.1 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop DS PF01916.17 RKO84980.1 - 1.1e-06 28.1 0.1 1.3e-06 27.9 0.1 1.1 1 0 0 1 1 1 1 Deoxyhypusine synthase peroxidase PF00141.23 RKO84981.1 - 0.003 17.3 0.0 0.0039 16.9 0.0 1.1 1 0 0 1 1 1 1 Peroxidase Sel1 PF08238.12 RKO84982.1 - 3.9e-08 33.7 3.1 9.1e-05 23.0 0.1 3.6 3 0 0 3 3 3 2 Sel1 repeat BLACT_WH PF17778.1 RKO84982.1 - 0.12 12.4 0.8 0.43 10.6 0.2 2.2 2 0 0 2 2 2 0 Beta-lactamase associated winged helix domain VIT1 PF01988.19 RKO84983.1 - 9.9e-39 133.4 0.0 1.1e-38 133.3 0.0 1.0 1 0 0 1 1 1 1 VIT family PI3_PI4_kinase PF00454.27 RKO84986.1 - 8.5e-24 84.7 0.0 9.8e-24 84.5 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DUF4135 PF13575.6 RKO84986.1 - 0.059 12.7 0.0 0.059 12.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) CD34_antigen PF06365.12 RKO84989.1 - 0.078 12.5 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 CD34/Podocalyxin family ER-remodelling PF14755.6 RKO84989.1 - 0.73 10.1 8.8 1.1 9.5 0.4 2.1 2 0 0 2 2 2 0 Intracellular membrane remodeller GST_N PF02798.20 RKO84990.1 - 7.1e-21 74.3 0.0 7.8e-21 74.2 0.0 1.0 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 RKO84990.1 - 5.7e-14 52.3 0.0 6.3e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 RKO84990.1 - 2.6e-13 50.1 0.0 2.9e-13 49.9 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Guanylate_cyc PF00211.20 RKO84991.1 - 1.7e-37 128.8 0.1 2.9e-37 128.1 0.1 1.3 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain FHA PF00498.26 RKO84991.1 - 5.5e-17 61.9 0.1 1.3e-16 60.7 0.1 1.7 1 0 0 1 1 1 1 FHA domain GAF_2 PF13185.6 RKO84991.1 - 4.4e-13 49.7 0.0 7.4e-13 49.0 0.0 1.3 1 0 0 1 1 1 1 GAF domain Yop-YscD_cpl PF16697.5 RKO84991.1 - 1.5e-12 47.6 0.0 6.5e-12 45.6 0.0 2.0 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain GAF_3 PF13492.6 RKO84991.1 - 1.2e-11 45.1 0.0 2.1e-11 44.3 0.0 1.5 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 RKO84991.1 - 1.5e-11 45.0 0.0 2.7e-11 44.2 0.0 1.4 1 0 0 1 1 1 1 GAF domain YEATS PF03366.16 RKO84994.1 - 1.6e-20 72.8 0.1 3.3e-20 71.8 0.1 1.5 1 0 0 1 1 1 1 YEATS family BIR PF00653.21 RKO84996.1 - 6.5e-32 110.0 0.1 8.3e-17 61.6 0.0 2.7 3 0 0 3 3 3 2 Inhibitor of Apoptosis domain MSP1_C PF07462.11 RKO84997.1 - 0.019 13.7 1.9 0.023 13.4 1.9 1.0 1 0 0 1 1 1 0 Merozoite surface protein 1 (MSP1) C-terminus DUF2666 PF10869.8 RKO84997.1 - 0.095 12.9 0.3 9.9 6.4 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2666) DUF3421 PF11901.8 RKO84998.1 - 2.1e-15 56.7 0.0 4.7e-08 33.0 0.0 1.6 1 1 1 2 2 2 2 Protein of unknown function (DUF3421) F-box-like PF12937.7 RKO85000.1 - 0.0024 17.7 0.0 0.0062 16.4 0.0 1.8 1 0 0 1 1 1 1 F-box-like AMP-binding PF00501.28 RKO85001.1 - 1.7e-60 204.8 0.0 2.1e-60 204.5 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme Dynamin_N PF00350.23 RKO85005.1 - 1.3e-34 119.7 0.3 1.1e-33 116.6 0.3 1.9 1 1 0 1 1 1 1 Dynamin family MMR_HSR1 PF01926.23 RKO85005.1 - 1e-06 28.8 0.1 2.3e-06 27.7 0.1 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 RKO85005.1 - 0.0019 17.8 0.1 0.53 9.8 0.0 2.2 2 0 0 2 2 2 2 Ferrous iron transport protein B Dynamin_M PF01031.20 RKO85005.1 - 0.0037 16.5 0.0 0.0058 15.9 0.0 1.3 1 0 0 1 1 1 1 Dynamin central region Roc PF08477.13 RKO85005.1 - 0.014 15.7 0.0 0.094 12.9 0.0 2.0 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Zeta_toxin PF06414.12 RKO85005.1 - 0.018 14.3 0.0 0.4 9.9 0.0 2.1 2 0 0 2 2 2 0 Zeta toxin NPH3 PF03000.14 RKO85005.1 - 0.026 14.2 0.1 0.035 13.7 0.1 1.1 1 0 0 1 1 1 0 NPH3 family AAA_16 PF13191.6 RKO85005.1 - 0.051 14.0 0.0 0.063 13.7 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain Mito_carr PF00153.27 RKO85007.1 - 7.2e-43 144.4 4.3 1.4e-18 66.6 0.1 3.6 3 1 0 3 3 3 3 Mitochondrial carrier protein FtsL PF04999.13 RKO85009.1 - 0.3 11.1 5.1 3.2 7.8 0.3 2.5 2 1 0 2 2 2 0 Cell division protein FtsL HRM PF02793.22 RKO85010.1 - 6.3e-13 48.8 42.3 0.02 15.2 1.8 7.6 7 1 0 7 7 7 6 Hormone receptor domain Sushi PF00084.20 RKO85010.1 - 0.012 16.2 24.4 1.9 9.1 0.3 6.2 6 1 0 6 6 6 0 Sushi repeat (SCR repeat) Glyco_hydro_15 PF00723.21 RKO85013.1 - 3.4e-12 45.9 0.1 5.3e-12 45.3 0.1 1.3 1 1 0 1 1 1 1 Glycosyl hydrolases family 15 zf-RING_14 PF17978.1 RKO85014.1 - 0.094 13.1 0.7 0.2 12.1 0.7 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain ADH_zinc_N PF00107.26 RKO85016.1 - 4.7e-07 29.8 1.0 8.6e-07 29.0 0.7 1.6 1 1 1 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 RKO85016.1 - 1e-06 29.9 0.3 1.4e-06 29.4 0.3 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Questin_oxidase PF14027.6 RKO85016.1 - 0.037 13.6 0.1 0.053 13.1 0.1 1.2 1 0 0 1 1 1 0 Questin oxidase-like TPR_2 PF07719.17 RKO85017.1 - 1.9e-07 30.7 0.9 0.32 11.2 0.1 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_9 PF13371.6 RKO85017.1 - 0.0019 18.3 4.5 0.39 10.9 0.6 3.2 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 RKO85017.1 - 0.0023 17.7 0.0 8.7 6.3 0.0 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO85017.1 - 0.044 14.4 4.4 3.8 8.2 2.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 RKO85017.1 - 0.046 14.0 3.0 0.092 13.1 0.9 2.4 1 1 1 2 2 2 0 Tetratricopeptide repeat SET PF00856.28 RKO85017.1 - 0.085 13.2 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 SET domain TPR_14 PF13428.6 RKO85017.1 - 0.58 11.1 5.2 17 6.6 0.2 3.4 1 1 3 4 4 4 0 Tetratricopeptide repeat ADH_zinc_N PF00107.26 RKO85018.1 - 0.00017 21.6 0.1 0.003 17.5 0.1 2.2 1 1 0 1 1 1 1 Zinc-binding dehydrogenase F-box-like PF12937.7 RKO85020.1 - 0.00037 20.3 0.0 0.00094 19.0 0.0 1.7 1 0 0 1 1 1 1 F-box-like Polysacc_deac_1 PF01522.21 RKO85021.1 - 3.2e-25 88.4 0.1 1.1e-24 86.7 0.1 1.8 2 0 0 2 2 2 1 Polysaccharide deacetylase Drf_FH3 PF06367.16 RKO85022.1 - 6.9e-37 127.0 2.7 7.1e-37 126.9 0.0 2.3 2 1 1 3 3 3 1 Diaphanous FH3 Domain Drf_GBD PF06371.13 RKO85022.1 - 4.3e-33 114.4 0.3 9.8e-33 113.3 0.1 1.6 2 0 0 2 2 2 1 Diaphanous GTPase-binding Domain CENP-F_N PF10481.9 RKO85022.1 - 0.01 15.5 1.5 0.26 10.9 0.5 2.2 2 0 0 2 2 2 0 Cenp-F N-terminal domain CAP_N PF01213.19 RKO85022.1 - 0.019 14.5 0.1 0.019 14.5 0.1 8.7 2 1 1 3 3 3 0 Adenylate cyclase associated (CAP) N terminal TMF_DNA_bd PF12329.8 RKO85022.1 - 0.068 13.2 0.4 0.068 13.2 0.4 3.2 4 0 0 4 4 4 0 TATA element modulatory factor 1 DNA binding LsmAD PF06741.13 RKO85022.1 - 0.3 11.7 1.4 0.74 10.4 0.7 2.0 2 0 0 2 2 2 0 LsmAD domain AAA PF00004.29 RKO85023.1 - 5.5e-15 56.0 0.0 9.5e-15 55.2 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 RKO85023.1 - 4.7e-05 23.6 0.1 0.00029 21.0 0.0 2.2 2 1 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 RKO85023.1 - 0.00026 21.0 0.0 0.00072 19.6 0.0 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 RKO85023.1 - 0.00095 18.9 0.5 0.01 15.6 0.5 2.2 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 RKO85023.1 - 0.0012 18.9 0.0 0.0022 18.0 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 RKO85023.1 - 0.0061 16.8 0.0 0.033 14.5 0.0 2.0 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 RKO85023.1 - 0.0093 15.9 0.0 0.033 14.1 0.0 1.8 2 0 0 2 2 2 1 NACHT domain AAA_16 PF13191.6 RKO85023.1 - 0.01 16.3 0.0 0.017 15.5 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 RKO85023.1 - 0.014 15.5 0.1 0.06 13.5 0.1 2.0 2 1 1 3 3 3 0 AAA domain RNA_helicase PF00910.22 RKO85023.1 - 0.031 14.6 0.1 0.16 12.4 0.0 2.2 3 0 0 3 3 3 0 RNA helicase TsaE PF02367.17 RKO85023.1 - 0.045 13.8 0.0 0.083 12.9 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 RKO85023.1 - 0.046 14.3 0.0 0.075 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 RKO85023.1 - 0.12 12.9 0.2 0.25 11.9 0.2 1.9 1 1 0 1 1 1 0 ABC transporter PRMT5_TIM PF17285.2 RKO85024.1 - 0.1 11.8 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 PRMT5 TIM barrel domain DEAD PF00270.29 RKO85026.1 - 3.5e-13 49.7 0.0 5.9e-13 49.0 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Kdo PF06293.14 RKO85027.1 - 0.0035 16.7 0.0 0.006 16.0 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 RKO85027.1 - 0.027 14.4 0.0 0.064 13.2 0.0 1.5 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase PF00069.25 RKO85027.1 - 0.031 13.7 0.0 0.36 10.2 0.0 2.0 2 0 0 2 2 2 0 Protein kinase domain Ndc80_HEC PF03801.13 RKO85028.1 - 6.2e-44 149.3 0.0 1.5e-43 148.0 0.0 1.6 1 0 0 1 1 1 1 HEC/Ndc80p family DUF5595 PF18077.1 RKO85028.1 - 3.5e-13 49.4 1.4 3.5e-13 49.4 1.4 3.9 4 1 2 6 6 6 1 Domain of unknown function (DUF5595) GCR PF02155.15 RKO85028.1 - 0.13 11.3 2.7 0.11 11.6 0.7 1.7 2 0 0 2 2 2 0 Glucocorticoid receptor ADIP PF11559.8 RKO85028.1 - 0.29 11.2 30.6 0.2 11.8 8.7 4.2 2 2 2 4 4 4 0 Afadin- and alpha -actinin-Binding ATP-synt_G PF04718.15 RKO85028.1 - 1.6 9.6 3.5 9.6 7.1 0.0 3.0 3 1 0 3 3 3 0 Mitochondrial ATP synthase g subunit zf-C4H2 PF10146.9 RKO85028.1 - 4.1 7.6 30.7 0.079 13.3 14.3 3.7 1 1 1 3 3 3 0 Zinc finger-containing protein Umbravirus_LDM PF04817.12 RKO85030.1 - 0.019 14.4 10.4 0.027 13.8 10.4 1.2 1 0 0 1 1 1 0 Umbravirus long distance movement (LDM) family WES_acyltransf PF03007.16 RKO85030.1 - 0.21 11.3 3.4 0.24 11.1 1.8 1.7 2 0 0 2 2 2 0 Wax ester synthase-like Acyl-CoA acyltransferase domain Bestrophin PF01062.21 RKO85031.1 - 6e-40 137.5 0.0 7.9e-40 137.1 0.0 1.1 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel BAR PF03114.18 RKO85032.1 - 1e-09 38.4 0.0 1.3e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 BAR domain SH3_1 PF00018.28 RKO85032.1 - 4.5e-09 35.8 0.6 1.1e-08 34.5 0.6 1.7 1 1 0 1 1 1 1 SH3 domain SH3_9 PF14604.6 RKO85032.1 - 8.5e-09 35.2 0.8 7.1e-08 32.2 0.1 2.4 2 1 1 3 3 3 1 Variant SH3 domain SH3_2 PF07653.17 RKO85032.1 - 4.4e-07 29.5 0.0 7.7e-07 28.7 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain MFS_1 PF07690.16 RKO85034.1 - 2.5e-28 99.1 33.0 3.6e-28 98.5 33.0 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO85034.1 - 4.4e-07 29.1 1.6 4.4e-07 29.1 1.6 2.8 2 1 1 3 3 3 2 Sugar (and other) transporter DUF4538 PF15061.6 RKO85034.1 - 0.14 11.9 0.0 0.39 10.5 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4538) MIF4G PF02854.19 RKO85039.1 - 7.2e-12 45.4 1.6 2.2e-11 43.8 0.2 2.0 2 0 0 2 2 2 1 MIF4G domain ADIP PF11559.8 RKO85039.1 - 0.012 15.7 1.8 0.012 15.7 1.8 1.6 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding Vps5 PF09325.10 RKO85039.1 - 0.017 14.7 0.0 0.032 13.8 0.0 1.5 1 0 0 1 1 1 0 Vps5 C terminal like CREPT PF16566.5 RKO85039.1 - 0.03 14.5 0.4 0.03 14.5 0.4 2.4 2 1 1 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour ERM PF00769.19 RKO85039.1 - 0.35 10.6 8.4 0.47 10.2 8.4 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family ATG16 PF08614.11 RKO85039.1 - 2.9 8.1 16.3 0.22 11.7 8.0 2.3 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) CENP-H PF05837.12 RKO85039.1 - 7.3 7.0 10.7 4.1 7.8 4.1 2.6 2 1 0 2 2 2 0 Centromere protein H (CENP-H) WD40 PF00400.32 RKO85040.1 - 1.8e-06 28.6 0.4 0.00032 21.5 0.1 2.5 2 0 0 2 2 2 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO85040.1 - 0.0049 17.1 0.0 0.037 14.3 0.0 1.9 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 RKO85041.1 - 1.2e-06 29.1 1.1 0.00026 21.7 0.2 2.8 3 0 0 3 3 3 2 WD domain, G-beta repeat NUDIX PF00293.28 RKO85042.1 - 1.2e-06 28.6 0.0 1.8e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain Cupin_8 PF13621.6 RKO85046.1 - 0.036 13.8 0.0 0.054 13.2 0.0 1.2 1 0 0 1 1 1 0 Cupin-like domain APH PF01636.23 RKO85046.1 - 1.5 8.6 9.6 1.3 8.9 8.1 1.6 2 1 0 2 2 2 0 Phosphotransferase enzyme family MIP PF00230.20 RKO85047.1 - 1e-34 120.2 5.1 1.2e-34 120.1 5.1 1.0 1 0 0 1 1 1 1 Major intrinsic protein DUF1295 PF06966.12 RKO85048.1 - 5.4e-28 98.1 0.1 6.9e-28 97.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Steroid_dh PF02544.16 RKO85048.1 - 0.00048 20.1 0.1 0.00057 19.9 0.1 1.2 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase ICMT PF04140.14 RKO85048.1 - 0.0037 17.6 0.0 0.0094 16.4 0.0 1.7 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AbiEi_3_N PF17194.4 RKO85050.1 - 0.0032 17.5 0.0 0.0049 16.9 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator, AbiEi antitoxin N-terminal domain Ank_5 PF13857.6 RKO85051.1 - 1e-08 35.2 7.8 0.21 12.0 0.3 5.8 5 1 0 5 5 5 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO85051.1 - 1.9e-08 34.8 0.0 0.18 12.4 0.0 3.7 2 1 1 4 4 4 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO85051.1 - 4.1e-08 33.6 2.3 1 10.0 0.0 6.1 6 0 0 6 6 6 2 Ankyrin repeats (many copies) Kdo PF06293.14 RKO85053.1 - 0.00027 20.4 0.0 0.00039 19.8 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 RKO85053.1 - 0.00044 20.3 0.0 0.00084 19.3 0.0 1.3 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 RKO85053.1 - 0.014 14.8 0.0 0.22 10.9 0.0 2.0 2 0 0 2 2 2 0 Protein kinase domain Ntox28 PF15605.6 RKO85053.1 - 0.088 13.1 0.0 0.26 11.5 0.0 1.7 2 0 0 2 2 2 0 Bacterial toxin 28 Glyco_tranf_2_3 PF13641.6 RKO85055.1 - 0.031 14.2 0.0 0.058 13.3 0.0 1.5 1 1 0 1 1 1 0 Glycosyltransferase like family 2 KORA PF16509.5 RKO85055.1 - 0.19 12.0 0.0 0.37 11.1 0.0 1.4 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor TMF_TATA_bd PF12325.8 RKO85057.1 - 8.5e-18 64.7 12.5 4.3e-11 43.1 2.6 4.2 3 2 1 4 4 4 2 TATA element modulatory factor 1 TATA binding UPF0242 PF06785.11 RKO85057.1 - 0.0032 17.6 1.8 0.0032 17.6 1.8 3.1 2 1 0 2 2 2 1 Uncharacterised protein family (UPF0242) N-terminus DUF3450 PF11932.8 RKO85057.1 - 0.012 15.0 3.7 0.012 15.0 3.7 3.6 2 1 2 4 4 4 0 Protein of unknown function (DUF3450) Takusan PF04822.13 RKO85057.1 - 0.015 15.2 2.4 0.015 15.2 2.4 4.2 4 1 0 4 4 4 0 Takusan DivIC PF04977.15 RKO85057.1 - 0.019 14.7 1.1 0.019 14.7 1.1 5.6 3 2 3 6 6 6 0 Septum formation initiator Flu_NS1 PF00600.19 RKO85057.1 - 0.026 14.1 0.0 0.047 13.3 0.0 1.4 1 0 0 1 1 1 0 Influenza non-structural protein (NS1) FlaC_arch PF05377.11 RKO85057.1 - 0.47 10.9 16.9 4.5 7.7 1.5 4.8 4 1 2 6 6 6 0 Flagella accessory protein C (FlaC) KIAA1430 PF13879.6 RKO85057.1 - 1.6 9.5 17.6 5.2 7.9 13.9 2.7 2 1 0 2 2 2 0 KIAA1430 homologue XRN_M PF17846.1 RKO85057.1 - 4.8 6.0 16.6 11 4.9 12.8 2.1 2 0 0 2 2 2 0 Xrn1 helical domain CENP-H PF05837.12 RKO85057.1 - 5.7 7.4 43.4 0.077 13.4 3.4 4.0 3 1 1 4 4 4 0 Centromere protein H (CENP-H) adh_short PF00106.25 RKO85058.1 - 9.5e-07 28.5 0.2 4.1e-06 26.4 0.2 1.8 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 RKO85058.1 - 0.0019 18.1 0.0 0.0031 17.5 0.0 1.2 1 0 0 1 1 1 1 KR domain adh_short_C2 PF13561.6 RKO85058.1 - 0.015 14.9 0.6 0.037 13.6 0.6 1.7 1 1 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Mucin PF01456.17 RKO85059.1 - 8.3e-05 22.6 19.1 8.3e-05 22.6 19.1 2.2 2 0 0 2 2 2 1 Mucin-like glycoprotein Reeler PF02014.16 RKO85059.1 - 0.0038 18.0 0.0 0.0083 16.9 0.0 1.5 1 0 0 1 1 1 1 Reeler domain Fasciclin PF02469.22 RKO85060.1 - 0.0058 16.8 0.1 0.019 15.1 0.0 1.9 2 0 0 2 2 2 1 Fasciclin domain Helicase_C PF00271.31 RKO85061.1 - 6e-25 87.7 0.2 1.6e-24 86.4 0.0 1.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Ribosomal_S6e PF01092.19 RKO85062.1 - 2.4e-57 192.3 0.3 4.1e-57 191.6 0.3 1.4 1 0 0 1 1 1 1 Ribosomal protein S6e PhyH PF05721.13 RKO85063.1 - 1.7e-09 38.3 0.0 1.9e-09 38.1 0.0 1.1 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) PAN_1 PF00024.26 RKO85064.1 - 0.076 13.0 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 PAN domain Potass_KdpF PF09604.10 RKO85064.1 - 6.6 6.8 7.0 13 5.9 7.0 1.5 1 0 0 1 1 1 0 F subunit of K+-transporting ATPase (Potass_KdpF) DUF1325 PF07039.11 RKO85067.1 - 4.9e-07 29.9 0.0 9.1e-07 29.0 0.0 1.4 1 0 0 1 1 1 1 SGF29 tudor-like domain LRR_8 PF13855.6 RKO85068.1 - 6.6e-06 25.8 0.5 1e-05 25.2 0.5 1.3 1 0 0 1 1 1 1 Leucine rich repeat LRR_4 PF12799.7 RKO85068.1 - 8.7e-05 22.8 0.4 8.7e-05 22.8 0.4 1.6 2 0 0 2 2 2 1 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 RKO85068.1 - 0.061 13.4 0.3 0.21 11.7 0.0 2.1 2 0 0 2 2 2 0 Leucine Rich repeat DUF3551 PF12071.8 RKO85069.1 - 0.054 13.6 0.0 2.6 8.1 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3551) adh_short PF00106.25 RKO85070.1 - 3.8e-51 173.3 9.2 4e-39 134.1 3.4 2.4 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 RKO85070.1 - 3.9e-42 144.4 4.4 3.1e-33 115.3 1.1 2.5 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase MaoC_dehydratas PF01575.19 RKO85070.1 - 2e-28 98.4 0.0 6.3e-28 96.8 0.0 1.8 1 0 0 1 1 1 1 MaoC like domain KR PF08659.10 RKO85070.1 - 1.6e-15 57.5 4.8 2.9e-11 43.6 0.6 2.3 2 0 0 2 2 2 2 KR domain MaoC_dehydrat_N PF13452.6 RKO85070.1 - 7.8e-07 29.3 0.1 0.0032 17.6 0.0 2.8 3 0 0 3 3 3 2 N-terminal half of MaoC dehydratase THF_DHG_CYH_C PF02882.19 RKO85070.1 - 0.045 13.1 0.9 0.11 11.8 0.9 1.6 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PglL_A PF15864.5 RKO85070.1 - 1.8 8.3 8.2 8.7 6.2 1.0 2.6 2 0 0 2 2 2 0 Protein glycosylation ligase VWA PF00092.28 RKO85073.1 - 0.00062 20.1 0.1 0.025 14.8 0.0 2.8 3 0 0 3 3 3 1 von Willebrand factor type A domain Asp_protease_2 PF13650.6 RKO85076.1 - 9.3e-09 35.8 0.0 2e-08 34.7 0.0 1.6 1 0 0 1 1 1 1 Aspartyl protease gag-asp_proteas PF13975.6 RKO85076.1 - 3.6e-07 30.7 0.0 6.6e-07 29.8 0.0 1.5 1 0 0 1 1 1 1 gag-polyprotein putative aspartyl protease Retrotrans_gag PF03732.17 RKO85076.1 - 1.9e-06 28.1 0.0 3.5e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Retrotransposon gag protein Asp_protease PF09668.10 RKO85076.1 - 0.019 14.8 0.0 0.032 14.0 0.0 1.3 1 0 0 1 1 1 0 Aspartyl protease Pet127 PF08634.10 RKO85080.1 - 1.8e-18 67.0 0.5 2.6e-18 66.4 0.5 1.3 1 0 0 1 1 1 1 Mitochondrial protein Pet127 Reovirus_M2 PF05993.12 RKO85080.1 - 0.053 11.6 0.0 0.065 11.3 0.0 1.1 1 0 0 1 1 1 0 Reovirus major virion structural protein Mu-1/Mu-1C (M2) efThoc1 PF11957.8 RKO85081.1 - 0.00016 20.5 0.1 0.00022 20.0 0.1 1.2 1 0 0 1 1 1 1 THO complex subunit 1 transcription elongation factor RSN1_TM PF13967.6 RKO85082.1 - 3.1e-26 92.0 2.9 4.6e-26 91.4 2.9 1.2 1 0 0 1 1 1 1 Late exocytosis, associated with Golgi transport PHM7_cyt PF14703.6 RKO85082.1 - 3.3e-21 76.3 0.0 4.7e-21 75.8 0.0 1.2 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter Cyclin_C_2 PF16899.5 RKO85083.1 - 1.3e-11 44.8 0.1 2.3e-11 44.0 0.1 1.5 1 1 0 1 1 1 1 Cyclin C-terminal domain DUF3135 PF11333.8 RKO85083.1 - 4.1e-05 23.8 3.9 4.9e-05 23.5 1.5 2.3 2 1 0 2 2 2 1 Protein of unknown function (DUF3135) DUF4807 PF16065.5 RKO85083.1 - 0.15 11.7 0.3 0.23 11.1 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4807) MDM31_MDM32 PF08118.11 RKO85087.1 - 0.077 11.7 0.5 0.095 11.4 0.5 1.0 1 0 0 1 1 1 0 Yeast mitochondrial distribution and morphology (MDM) proteins PmbA_TldD PF01523.16 RKO85087.1 - 0.14 12.0 3.8 0.16 11.8 3.8 1.1 1 0 0 1 1 1 0 Putative modulator of DNA gyrase DUF3987 PF13148.6 RKO85087.1 - 0.2 10.6 8.4 0.24 10.4 8.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) DUF1682 PF07946.14 RKO85087.1 - 8.1 5.6 13.0 10 5.2 13.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Med1 PF10744.9 RKO85088.1 - 2.8e-13 49.7 0.1 2.9e-12 46.4 0.1 2.2 1 1 0 1 1 1 1 Mediator of RNA polymerase II transcription subunit 1 THEG4 PF15834.5 RKO85088.1 - 0.043 13.8 0.4 0.069 13.1 0.4 1.3 1 0 0 1 1 1 0 Testis highly expressed protein 4 PEX-1N PF09262.11 RKO85089.1 - 6e-28 97.1 2.1 1.9e-27 95.5 2.1 1.9 1 0 0 1 1 1 1 Peroxisome biogenesis factor 1, N-terminal AAA PF00004.29 RKO85089.1 - 3.7e-11 43.6 0.0 6.2e-11 42.9 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 RKO85089.1 - 2.3e-06 28.1 4.5 0.00012 22.5 2.4 3.1 2 1 0 2 2 2 1 AAA ATPase domain PEX-2N PF09263.10 RKO85089.1 - 6.2e-05 23.3 0.0 0.0003 21.1 0.0 2.1 1 1 0 1 1 1 1 Peroxisome biogenesis factor 1, N-terminal NACHT PF05729.12 RKO85089.1 - 0.0011 18.9 0.0 0.0029 17.5 0.0 1.7 1 1 0 1 1 1 1 NACHT domain UFD1 PF03152.14 RKO85089.1 - 0.0015 18.1 0.0 0.0025 17.3 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin fusion degradation protein UFD1 CDC48_2 PF02933.17 RKO85089.1 - 0.0078 16.0 0.6 0.053 13.3 0.0 2.4 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 DUF815 PF05673.13 RKO85089.1 - 0.01 15.0 0.0 0.015 14.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DEAD PF00270.29 RKO85090.1 - 6.2e-18 65.2 0.9 2.1e-17 63.4 0.7 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO85090.1 - 1.9e-12 47.5 0.7 1.7e-10 41.2 0.1 3.3 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO85090.1 - 4e-09 36.7 0.2 8.8e-09 35.6 0.2 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Flavi_DEAD PF07652.14 RKO85090.1 - 0.037 14.0 0.1 0.81 9.7 0.1 2.5 2 0 0 2 2 2 0 Flavivirus DEAD domain AAA PF00004.29 RKO85090.1 - 0.16 12.4 1.1 0.68 10.4 1.1 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) CDPS PF16715.5 RKO85091.1 - 0.0023 17.6 0.5 0.0032 17.1 0.5 1.1 1 0 0 1 1 1 1 Cyclodipeptide synthase Ribosomal_S19e PF01090.19 RKO85091.1 - 0.14 11.9 0.7 0.85 9.3 0.0 2.2 1 1 1 2 2 2 0 Ribosomal protein S19e Wzz PF02706.15 RKO85091.1 - 0.24 11.7 0.0 0.45 10.9 0.0 1.3 1 0 0 1 1 1 0 Chain length determinant protein HNF-1A_C PF04813.12 RKO85091.1 - 4.7 8.1 13.2 0.11 13.3 2.1 2.5 2 1 0 2 2 2 0 Hepatocyte nuclear factor 1 (HNF-1), alpha isoform C terminus Phage_GPO PF05929.11 RKO85093.1 - 0.26 10.9 0.0 0.39 10.3 0.0 1.1 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase Actin PF00022.19 RKO85094.1 - 6.7e-26 90.8 0.0 7.3e-26 90.7 0.0 1.0 1 0 0 1 1 1 1 Actin ALP_N PF17989.1 RKO85094.1 - 0.14 12.3 0.0 0.17 12.1 0.0 1.1 1 0 0 1 1 1 0 Actin like proteins N terminal domain ANAPC9 PF12856.7 RKO85094.1 - 0.16 12.1 0.0 0.2 11.8 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 9 Cytochrom_C PF00034.21 RKO85095.1 - 1.1e-11 45.7 0.0 1.5e-11 45.3 0.0 1.2 1 0 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 RKO85095.1 - 6e-06 26.5 2.5 3e-05 24.2 2.5 1.9 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 RKO85095.1 - 0.0017 18.0 0.2 0.0045 16.7 0.1 1.8 2 0 0 2 2 2 1 Cytochrome c-550 domain PAC3 PF10178.9 RKO85096.1 - 4.4e-15 55.6 0.0 6.9e-15 55.0 0.0 1.3 1 0 0 1 1 1 1 Proteasome assembly chaperone 3 T2SSI PF02501.17 RKO85098.1 - 0.026 14.7 0.8 1.1 9.4 0.0 2.9 3 0 0 3 3 3 0 Type II secretion system (T2SS), protein I Chromo PF00385.24 RKO85100.1 - 1.1e-08 34.8 2.0 1.7e-08 34.2 2.0 1.3 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain GTP_EFTU_D3 PF03143.17 RKO85101.1 - 1.2e-27 96.5 0.2 3.6e-27 94.9 0.0 1.8 2 1 1 3 3 3 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 RKO85101.1 - 6.5e-20 71.3 2.6 6.5e-20 71.3 2.6 1.5 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU PF00009.27 RKO85102.1 - 2e-58 197.1 0.2 2.3e-58 196.9 0.2 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 RKO85102.1 - 2.4e-05 24.4 0.0 3.3e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase cobW PF02492.19 RKO85102.1 - 0.00016 21.4 0.6 0.00032 20.3 0.0 1.7 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 RKO85102.1 - 0.0023 17.8 0.1 0.0067 16.3 0.0 1.7 1 1 1 2 2 2 1 RsgA GTPase PduV-EutP PF10662.9 RKO85102.1 - 0.0062 16.3 0.7 2.3 7.9 0.1 2.2 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation Gtr1_RagA PF04670.12 RKO85102.1 - 0.099 12.0 0.0 0.6 9.4 0.0 1.9 1 1 0 1 1 1 0 Gtr1/RagA G protein conserved region Ependymin PF00811.18 RKO85102.1 - 0.18 12.1 0.0 0.26 11.5 0.0 1.2 1 0 0 1 1 1 0 Ependymin FeoB_N PF02421.18 RKO85102.1 - 0.34 10.4 2.2 8.5 5.9 0.2 2.6 2 1 0 2 2 2 0 Ferrous iron transport protein B DAHP_synth_1 PF00793.20 RKO85103.1 - 1.5e-96 322.5 0.0 1.9e-96 322.2 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family Glyco_transf_4 PF13439.6 RKO85104.1 - 0.043 13.8 1.8 2.6 8.0 0.2 2.5 2 1 1 3 3 3 0 Glycosyltransferase Family 4 TMF_TATA_bd PF12325.8 RKO85104.1 - 0.26 11.5 3.0 1.7 8.9 0.4 2.4 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF4407 PF14362.6 RKO85104.1 - 1.3 8.3 6.8 1.3 8.3 5.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) UQ_con PF00179.26 RKO85105.1 - 1.4e-24 86.4 0.0 1.5e-24 86.2 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 RKO85105.1 - 0.019 14.7 0.0 0.022 14.5 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family B ATP11 PF06644.11 RKO85107.1 - 9.7e-48 163.3 0.4 1.1e-47 163.1 0.4 1.0 1 0 0 1 1 1 1 ATP11 protein GTP_EFTU PF00009.27 RKO85108.1 - 1e-48 165.4 0.0 1.4e-48 165.1 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFTUD2 PF16004.5 RKO85108.1 - 7.5e-38 129.9 6.8 1.1e-37 129.3 6.8 1.2 1 0 0 1 1 1 1 116 kDa U5 small nuclear ribonucleoprotein component N-terminus MMR_HSR1 PF01926.23 RKO85108.1 - 1.2e-06 28.6 0.0 2.3e-06 27.6 0.0 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 RKO85108.1 - 0.0032 17.7 0.0 0.033 14.4 0.0 2.3 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 RKO85108.1 - 0.012 15.6 0.1 4.3 7.4 0.0 2.5 2 0 0 2 2 2 0 Dynamin family Ras PF00071.22 RKO85108.1 - 0.017 14.7 0.1 0.089 12.4 0.1 1.9 1 1 0 1 1 1 0 Ras family Septin PF00735.18 RKO85108.1 - 0.039 13.2 0.0 0.06 12.6 0.0 1.2 1 0 0 1 1 1 0 Septin RsgA_GTPase PF03193.16 RKO85108.1 - 0.056 13.4 0.2 7.9 6.4 0.3 2.9 2 1 1 3 3 3 0 RsgA GTPase YL1 PF05764.13 RKO85108.1 - 0.56 10.3 5.6 0.78 9.8 5.6 1.2 1 0 0 1 1 1 0 YL1 nuclear protein eRF1_3 PF03465.15 RKO85109.1 - 9.2e-09 35.8 0.0 1e-08 35.6 0.0 1.0 1 0 0 1 1 1 1 eRF1 domain 3 Rgp1 PF08737.10 RKO85110.1 - 0.00012 21.4 0.0 0.00018 20.8 0.0 1.3 1 0 0 1 1 1 1 Rgp1 Fungal_trans PF04082.18 RKO85111.1 - 1.9e-16 59.9 0.0 3.6e-16 59.0 0.0 1.4 1 0 0 1 1 1 1 Fungal specific transcription factor domain TcpS PF17456.2 RKO85113.1 - 0.04 14.0 3.0 8.4 6.4 0.7 3.4 1 1 2 3 3 3 0 Toxin-coregulated pilus protein S Gas_vesicle PF00741.18 RKO85113.1 - 0.13 12.5 2.9 2e+02 2.2 0.0 5.0 6 0 0 6 6 6 0 Gas vesicle protein YjbH PF06082.11 RKO85113.1 - 0.17 10.6 6.0 0.22 10.3 6.0 1.0 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH OEP PF02321.18 RKO85113.1 - 0.25 11.1 21.0 0.44 10.3 2.5 3.4 1 1 3 4 4 4 0 Outer membrane efflux protein AAA_13 PF13166.6 RKO85113.1 - 1 7.9 10.7 1.3 7.6 10.7 1.2 1 0 0 1 1 1 0 AAA domain KptA_kDCL PF18176.1 RKO85113.1 - 1.3 8.9 5.1 24 4.7 0.4 2.8 1 1 1 2 2 2 0 KptA in kinetoplastid DICER domain URO-D PF01208.17 RKO85114.1 - 8.2e-92 308.0 0.0 8.8e-52 176.4 0.0 2.1 1 1 1 2 2 2 2 Uroporphyrinogen decarboxylase (URO-D) DSPc PF00782.20 RKO85115.1 - 2.6e-13 49.9 0.0 4.2e-13 49.3 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 RKO85115.1 - 1.2e-05 25.0 0.0 1.8e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 RKO85115.1 - 5.9e-05 23.2 0.0 0.00011 22.3 0.0 1.4 1 0 0 1 1 1 1 Inositol hexakisphosphate PNP_phzG_C PF10590.9 RKO85115.1 - 0.067 13.3 1.2 0.13 12.3 1.2 1.5 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Y_phosphatase3 PF13350.6 RKO85115.1 - 0.16 11.9 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 Tyrosine phosphatase family Glyoxal_oxid_N PF07250.11 RKO85116.1 - 5.8e-33 114.1 0.0 2.5e-32 112.0 0.0 2.1 2 1 0 2 2 2 1 Glyoxal oxidase N-terminus DUF1929 PF09118.11 RKO85116.1 - 1.9e-26 92.2 0.5 3.4e-26 91.3 0.5 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1929) Kelch_4 PF13418.6 RKO85116.1 - 2.4e-05 24.3 0.5 0.076 13.0 0.0 4.7 5 1 1 6 6 6 1 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO85116.1 - 0.00029 21.0 0.1 3.3 8.1 0.0 5.3 6 1 1 7 7 7 1 Kelch motif Kelch_5 PF13854.6 RKO85116.1 - 0.016 15.2 0.0 0.37 10.8 0.0 2.8 3 0 0 3 3 3 0 Kelch motif NUMOD1 PF07453.13 RKO85116.1 - 0.11 12.8 0.0 32 4.9 0.0 2.9 3 0 0 3 3 3 0 NUMOD1 domain Kelch_2 PF07646.15 RKO85116.1 - 0.11 12.5 0.0 5.7 7.1 0.0 3.3 4 0 0 4 4 4 0 Kelch motif Amelin PF05111.12 RKO85117.1 - 0.045 12.9 0.0 0.055 12.6 0.0 1.2 1 0 0 1 1 1 0 Ameloblastin precursor (Amelin) 3Beta_HSD PF01073.19 RKO85118.1 - 3.9e-70 236.0 0.0 4.7e-70 235.8 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Epimerase PF01370.21 RKO85118.1 - 5.6e-31 107.8 0.0 7.3e-31 107.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 RKO85118.1 - 3.3e-16 59.6 0.0 1.3e-15 57.7 0.0 1.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_10 PF13460.6 RKO85118.1 - 3.6e-16 59.6 0.0 5.4e-16 59.0 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_4 PF07993.12 RKO85118.1 - 2.2e-12 46.7 0.6 6.1e-11 42.0 0.0 2.2 1 1 0 2 2 2 1 Male sterility protein RmlD_sub_bind PF04321.17 RKO85118.1 - 1e-08 34.7 0.0 1.4e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 RKO85118.1 - 4.2e-07 29.4 0.4 3.3e-06 26.4 0.2 2.3 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Sacchrp_dh_NADP PF03435.18 RKO85118.1 - 0.00024 21.4 0.0 0.00042 20.6 0.0 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NmrA PF05368.13 RKO85118.1 - 0.0045 16.6 0.0 0.01 15.4 0.0 1.5 1 1 0 1 1 1 1 NmrA-like family TrkA_N PF02254.18 RKO85118.1 - 0.008 16.4 0.0 0.013 15.7 0.0 1.3 1 0 0 1 1 1 1 TrkA-N domain KR PF08659.10 RKO85118.1 - 0.054 13.4 0.0 1.2 9.0 0.0 2.3 2 0 0 2 2 2 0 KR domain RNase_H PF00075.24 RKO85125.1 - 3e-12 46.9 0.1 4.1e-12 46.5 0.1 1.2 1 0 0 1 1 1 1 RNase H Polysacc_deac_1 PF01522.21 RKO85126.1 - 3.6e-18 65.6 0.1 4.8e-18 65.2 0.1 1.2 1 0 0 1 1 1 1 Polysaccharide deacetylase IL3 PF02059.15 RKO85127.1 - 0.0097 16.0 0.1 0.016 15.3 0.1 1.3 1 0 0 1 1 1 1 Interleukin-3 Pex19 PF04614.12 RKO85128.1 - 7.7e-47 160.1 3.3 8.4e-47 160.0 3.3 1.0 1 0 0 1 1 1 1 Pex19 protein family Oxidored_FMN PF00724.20 RKO85130.1 - 4e-15 55.9 0.0 4.3e-15 55.8 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family OrfB_Zn_ribbon PF07282.11 RKO85131.1 - 0.0035 17.2 0.0 0.076 12.9 0.0 2.3 2 0 0 2 2 2 1 Putative transposase DNA-binding domain TB2_DP1_HVA22 PF03134.19 RKO85132.1 - 2.8e-19 68.8 0.0 3.3e-19 68.6 0.0 1.0 1 0 0 1 1 1 1 TB2/DP1, HVA22 family p450 PF00067.22 RKO85133.1 - 5.5e-09 35.3 0.0 6.8e-09 35.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Aminotran_1_2 PF00155.21 RKO85134.1 - 4.1e-52 177.6 0.0 4.9e-52 177.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 RKO85134.1 - 0.00045 18.9 0.0 0.00072 18.2 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme CinA_KH PF18146.1 RKO85134.1 - 0.43 10.8 2.7 22 5.3 0.1 3.1 3 0 0 3 3 3 0 Damage-inducible protein CinA KH domain FragX_IP PF05994.11 RKO85135.1 - 3.9e-32 111.2 0.0 8.7e-32 110.1 0.0 1.5 1 1 0 1 1 1 1 Cytoplasmic Fragile-X interacting family G-alpha PF00503.20 RKO85136.1 - 9.6e-08 31.6 0.1 1.1e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 G-protein alpha subunit FragX_IP PF05994.11 RKO85137.1 - 1.1e-20 73.3 0.0 1.5e-20 72.9 0.0 1.0 1 0 0 1 1 1 1 Cytoplasmic Fragile-X interacting family TraT PF05818.12 RKO85137.1 - 4.5 6.9 7.2 5.8 6.5 7.2 1.1 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein Tachystatin_B PF11478.8 RKO85138.1 - 0.021 14.8 1.9 0.021 14.8 1.9 1.7 2 0 0 2 2 2 0 Antimicrobial chitin binding protein tachystatin B Colipase_C PF02740.14 RKO85138.1 - 6.1 7.1 6.7 30 4.9 0.1 3.7 4 1 0 4 4 4 0 Colipase, C-terminal domain LRR_4 PF12799.7 RKO85139.1 - 0.00084 19.7 0.1 11 6.6 0.0 4.2 3 2 1 4 4 4 3 Leucine Rich repeats (2 copies) F-box-like PF12937.7 RKO85139.1 - 0.02 14.8 0.2 0.02 14.8 0.2 2.0 2 0 0 2 2 2 0 F-box-like DUF3322 PF11795.8 RKO85139.1 - 0.063 13.3 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria N-term (DUF3322) LRR_6 PF13516.6 RKO85139.1 - 0.19 11.9 0.1 76 3.8 0.2 3.9 5 0 0 5 5 5 0 Leucine Rich repeat Radical_SAM PF04055.21 RKO85140.1 - 8e-13 49.1 0.0 1.7e-12 48.0 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily TRAM PF01938.20 RKO85140.1 - 1.3e-09 37.9 0.2 3.9e-09 36.4 0.2 1.8 1 0 0 1 1 1 1 TRAM domain UPF0004 PF00919.20 RKO85140.1 - 0.0052 16.8 0.0 0.011 15.8 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 F-box-like PF12937.7 RKO85142.1 - 3e-08 33.4 0.5 3e-08 33.4 0.5 2.0 2 0 0 2 2 2 1 F-box-like LRR_6 PF13516.6 RKO85142.1 - 5.9e-06 25.9 10.0 1.8 8.8 0.1 6.5 7 0 0 7 7 7 3 Leucine Rich repeat LRR_4 PF12799.7 RKO85142.1 - 0.0018 18.6 4.5 2.3 8.8 0.1 4.0 4 1 0 4 4 4 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 RKO85142.1 - 0.035 14.6 8.7 16 6.5 0.3 6.3 6 1 1 7 7 7 0 Leucine Rich Repeat F-box PF00646.33 RKO85142.1 - 0.081 12.8 0.5 0.31 11.0 0.0 2.3 2 0 0 2 2 2 0 F-box domain LRR_8 PF13855.6 RKO85142.1 - 0.29 10.9 6.4 13 5.7 0.6 4.2 4 1 0 4 4 4 0 Leucine rich repeat DnaJ PF00226.31 RKO85143.1 - 4.2e-11 42.8 0.1 9.5e-11 41.7 0.1 1.6 1 0 0 1 1 1 1 DnaJ domain NACHT_N PF17100.5 RKO85143.1 - 0.5 10.2 5.3 0.86 9.4 3.3 1.9 2 0 0 2 2 2 0 N-terminal domain of NWD NACHT-NTPase 3HCDH_N PF02737.18 RKO85144.1 - 1.5e-15 57.5 0.1 4.3e-15 56.1 0.1 1.7 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEK_C PF08766.11 RKO85145.1 - 4.3e-18 65.0 3.2 3.9e-17 61.9 0.3 2.4 2 0 0 2 2 2 1 DEK C terminal domain SAP PF02037.27 RKO85145.1 - 0.028 14.2 0.0 0.1 12.4 0.0 2.1 1 0 0 1 1 1 0 SAP domain DUF4407 PF14362.6 RKO85145.1 - 2 7.7 7.1 1.4 8.2 5.4 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) BNIP2 PF12496.8 RKO85147.1 - 1.4 9.4 6.1 2.4 8.6 0.8 2.7 2 0 0 2 2 2 0 Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 K_trans PF02705.16 RKO85150.1 - 1.2e-81 274.9 12.0 1.4e-81 274.6 12.0 1.1 1 0 0 1 1 1 1 K+ potassium transporter DUF4131 PF13567.6 RKO85150.1 - 0.01 15.5 0.5 0.031 13.9 0.5 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) SAP130_C PF16014.5 RKO85150.1 - 0.015 14.4 2.2 0.018 14.1 0.0 2.0 1 1 1 2 2 2 0 Histone deacetylase complex subunit SAP130 C-terminus DUF1523 PF07509.11 RKO85150.1 - 0.032 13.6 0.1 0.12 11.7 0.1 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1523) Herpes_LMP1 PF05297.11 RKO85150.1 - 1.6 7.9 4.4 2.7 7.1 4.4 1.3 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) TSNAXIP1_N PF15739.5 RKO85153.1 - 0.0013 19.1 2.6 0.0013 19.1 2.6 3.5 2 2 1 3 3 3 1 Translin-associated factor X-interacting N-terminus AAA_21 PF13304.6 RKO85153.1 - 0.2 11.5 2.1 0.47 10.2 2.1 1.5 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_12 PF13087.6 RKO85155.1 - 3.8e-36 124.6 0.0 4.2e-36 124.5 0.0 1.0 1 0 0 1 1 1 1 AAA domain UvrD_C_2 PF13538.6 RKO85155.1 - 9.7e-05 22.1 0.1 0.00023 20.9 0.1 1.7 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain UvrD_C PF13361.6 RKO85155.1 - 0.045 13.1 0.1 1.9 7.8 0.0 2.0 2 0 0 2 2 2 0 UvrD-like helicase C-terminal domain AMP-binding PF00501.28 RKO85156.1 - 4.3e-50 170.5 0.1 5e-50 170.3 0.1 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 RKO85156.1 - 0.00048 21.0 0.0 0.00082 20.3 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 RKO85156.1 - 0.017 14.0 0.0 0.036 12.9 0.0 1.5 2 0 0 2 2 2 0 GH3 auxin-responsive promoter T2SSF PF00482.23 RKO85157.1 - 0.058 13.4 0.0 0.058 13.4 0.0 2.4 2 1 0 2 2 2 0 Type II secretion system (T2SS), protein F Spc7 PF08317.11 RKO85157.1 - 0.69 8.7 7.8 0.92 8.3 7.8 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4200 PF13863.6 RKO85157.1 - 3.8 7.9 11.7 15 6.0 10.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) DUF5401 PF17380.2 RKO85157.1 - 6.9 4.6 11.6 8.8 4.3 11.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) Actin PF00022.19 RKO85158.1 - 4.2e-68 229.8 0.1 3.5e-67 226.8 0.1 1.9 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 RKO85158.1 - 0.018 13.9 0.0 0.022 13.6 0.0 1.1 1 0 0 1 1 1 0 MreB/Mbl protein DUF3502 PF12010.8 RKO85158.1 - 0.019 15.6 0.1 0.09 13.4 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3502) Porphobil_deam PF01379.20 RKO85159.1 - 8.3e-12 45.0 0.0 1.8e-11 43.9 0.0 1.5 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Stevor PF17410.2 RKO85161.1 - 0.034 13.7 0.5 0.057 13.0 0.5 1.3 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Fer4_4 PF12800.7 RKO85161.1 - 0.22 12.1 0.8 40 5.1 0.1 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain ICAP-1_inte_bdg PF10480.9 RKO85161.1 - 2.7 7.9 5.5 4.1 7.4 5.5 1.2 1 0 0 1 1 1 0 Beta-1 integrin binding protein Dicty_REP PF05086.12 RKO85161.1 - 4 5.3 7.6 4.9 5.0 7.6 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Kri1 PF05178.12 RKO85162.1 - 2.2e-26 92.4 7.8 2.2e-26 92.4 7.8 4.1 3 1 0 3 3 3 1 KRI1-like family LigB PF02900.18 RKO85162.1 - 0.06 12.4 0.2 1.2 8.1 0.1 2.3 2 0 0 2 2 2 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase DUF2284 PF10050.9 RKO85162.1 - 0.12 12.1 0.0 0.34 10.6 0.0 1.7 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) Gpr1_Fun34_YaaH PF01184.19 RKO85163.1 - 3.1e-71 239.2 11.7 3.7e-71 239.0 11.7 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family Retrotran_gag_3 PF14244.6 RKO85165.1 - 0.044 13.6 0.4 0.091 12.6 0.2 1.6 1 1 0 1 1 1 0 gag-polypeptide of LTR copia-type Dicty_CAR PF05462.11 RKO85166.1 - 2.3e-17 63.1 14.7 5.5e-16 58.6 5.8 2.0 2 0 0 2 2 2 2 Slime mold cyclic AMP receptor Frizzled PF01534.17 RKO85166.1 - 7.4e-09 35.1 13.0 2.4e-07 30.1 13.0 2.2 1 1 0 1 1 1 1 Frizzled/Smoothened family membrane region 7tm_1 PF00001.21 RKO85166.1 - 5e-08 32.6 3.2 6.5e-08 32.2 3.2 1.1 1 0 0 1 1 1 1 7 transmembrane receptor (rhodopsin family) Git3 PF11710.8 RKO85166.1 - 2.1e-07 30.9 9.0 2.1e-07 30.9 9.0 1.5 2 0 0 2 2 2 1 G protein-coupled glucose receptor regulating Gpa2 7TM_GPCR_Srsx PF10320.9 RKO85166.1 - 3.2e-07 30.0 2.9 4.2e-07 29.6 2.9 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srsx DUF2070 PF09843.9 RKO85166.1 - 8.2 4.6 7.8 0.92 7.7 2.9 1.7 2 0 0 2 2 2 0 Predicted membrane protein (DUF2070) YjeF_N PF03853.15 RKO85170.1 - 0.14 12.0 0.0 0.16 11.9 0.0 1.0 1 0 0 1 1 1 0 YjeF-related protein N-terminus DUF4013 PF13197.6 RKO85173.1 - 0.5 10.2 10.1 0.32 10.8 7.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF4013) DUF3693 PF12472.8 RKO85176.1 - 1.9 8.2 4.9 0.86 9.3 2.3 1.8 1 1 1 2 2 2 0 Phage related protein Cyclin PF08613.11 RKO85178.1 - 7.6e-08 32.9 0.0 1.1e-07 32.4 0.0 1.2 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 RKO85178.1 - 0.0014 18.4 0.2 0.0026 17.5 0.2 1.6 1 1 0 1 1 1 1 Cyclin, N-terminal domain Peptidase_M20 PF01546.28 RKO85180.1 - 7e-28 97.7 0.0 9e-28 97.4 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 RKO85180.1 - 9.9e-14 51.2 0.0 5e-13 48.9 0.0 2.0 1 1 0 1 1 1 1 Peptidase dimerisation domain PQQ_2 PF13360.6 RKO85182.1 - 3.4e-10 39.9 0.2 3e-07 30.3 0.0 2.3 2 0 0 2 2 2 2 PQQ-like domain PQQ_3 PF13570.6 RKO85182.1 - 5.4e-10 39.4 0.0 0.0056 17.1 0.0 4.7 5 0 0 5 5 5 2 PQQ-like domain PQQ PF01011.21 RKO85182.1 - 0.0049 16.7 0.0 0.026 14.4 0.0 2.3 2 0 0 2 2 2 1 PQQ enzyme repeat ANAPC4_WD40 PF12894.7 RKO85182.1 - 0.011 16.0 0.0 0.071 13.4 0.0 2.3 3 0 0 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain Lactonase PF10282.9 RKO85182.1 - 0.16 11.2 0.0 0.25 10.5 0.0 1.4 1 0 0 1 1 1 0 Lactonase, 7-bladed beta-propeller Hydrolase PF00702.26 RKO85184.1 - 2.4e-13 50.9 0.4 3.1e-13 50.5 0.4 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 RKO85184.1 - 0.0019 18.0 0.3 0.0069 16.1 0.1 1.9 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 RKO85184.1 - 0.037 14.4 0.1 0.87 10.0 0.2 2.2 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 RKO85184.1 - 0.08 13.1 0.0 0.2 11.8 0.0 1.7 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase PhetRS_B1 PF18262.1 RKO85185.1 - 1.3e-30 105.4 0.1 4.9e-30 103.6 0.0 2.0 2 1 0 2 2 2 1 Phe-tRNA synthetase beta subunit B1 domain B3_4 PF03483.17 RKO85185.1 - 5.8e-27 94.5 0.1 1.1e-26 93.6 0.1 1.5 1 0 0 1 1 1 1 B3/4 domain B5 PF03484.15 RKO85185.1 - 4.7e-19 68.5 0.0 7.6e-17 61.4 0.0 2.9 3 0 0 3 3 3 1 tRNA synthetase B5 domain tRNA_synthFbeta PF17759.1 RKO85185.1 - 0.00032 20.2 0.0 0.00058 19.4 0.0 1.4 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain DUF2740 PF10872.8 RKO85185.1 - 0.099 12.5 0.1 1.4 8.8 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2740) DHBP_synthase PF00926.19 RKO85186.1 - 1.4e-83 279.1 0.0 1.6e-83 278.9 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase EFG_IV PF03764.18 RKO85187.1 - 6.9e-26 90.4 0.0 1.8e-25 89.1 0.0 1.7 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 RKO85187.1 - 3.3e-22 78.3 0.0 6.2e-22 77.4 0.0 1.5 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 RKO85187.1 - 1.1e-08 35.3 0.1 2.4e-08 34.2 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_II PF14492.6 RKO85187.1 - 4e-07 30.0 0.0 3.3e-06 27.1 0.0 2.2 2 0 0 2 2 2 1 Elongation Factor G, domain II Ribosomal_S17e PF00833.18 RKO85188.1 - 2.8e-61 204.8 0.1 3.4e-61 204.6 0.1 1.1 1 0 0 1 1 1 1 Ribosomal S17 DUF3016 PF11454.8 RKO85188.1 - 0.14 11.9 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3016) ABC_tran PF00005.27 RKO85190.1 - 1.8e-08 35.0 0.0 2.5e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_13 PF13166.6 RKO85190.1 - 0.0041 15.8 0.0 0.0051 15.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 RKO85190.1 - 0.12 12.6 0.1 0.5 10.6 0.0 1.9 1 1 1 2 2 2 0 Putative exonuclease SbcCD, C subunit DUF3421 PF11901.8 RKO85191.1 - 1.9e-41 140.7 2.9 9.8e-24 83.6 0.7 2.2 1 1 2 3 3 3 3 Protein of unknown function (DUF3421) Radical_SAM PF04055.21 RKO85192.1 - 2.6e-13 50.7 0.0 4.6e-13 49.9 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 RKO85192.1 - 0.00028 21.0 0.0 0.00051 20.2 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 RKO85192.1 - 0.11 12.7 0.0 0.22 11.8 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain TRAPPC10 PF12584.8 RKO85193.1 - 0.017 14.8 0.0 0.034 13.8 0.0 1.4 1 0 0 1 1 1 0 Trafficking protein particle complex subunit 10, TRAPPC10 DUF3824 PF12868.7 RKO85196.1 - 0.0059 17.3 2.7 0.0099 16.5 2.7 1.4 1 0 0 1 1 1 1 Domain of unknwon function (DUF3824) CDC45 PF02724.14 RKO85197.1 - 5.8 5.1 12.2 6.5 4.9 12.2 1.0 1 0 0 1 1 1 0 CDC45-like protein DEAD PF00270.29 RKO85199.1 - 4.9e-49 166.5 0.0 7.1e-49 165.9 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO85199.1 - 3.1e-30 104.8 0.0 1.5e-29 102.6 0.0 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO85199.1 - 0.012 15.6 0.0 0.021 14.8 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit CMS1 PF14617.6 RKO85199.1 - 0.15 11.3 0.0 0.34 10.2 0.0 1.5 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit ERCC3_RAD25_C PF16203.5 RKO85199.1 - 0.17 11.1 0.0 0.3 10.3 0.0 1.3 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase PAP_RNA-bind PF04926.15 RKO85200.1 - 8.5e-07 28.8 0.0 8.5e-07 28.8 0.0 1.1 1 0 0 1 1 1 1 Poly(A) polymerase predicted RNA binding domain Init_tRNA_PT PF04179.12 RKO85200.1 - 0.062 13.6 0.0 0.078 13.3 0.0 1.2 1 0 0 1 1 1 0 Rit1 DUSP-like domain DUF4620 PF15399.6 RKO85200.1 - 0.067 13.5 1.2 0.25 11.7 0.3 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4620) Melibiase_2 PF16499.5 RKO85202.1 - 1.3e-28 100.0 0.6 1.7e-28 99.6 0.6 1.1 1 0 0 1 1 1 1 Alpha galactosidase A Peptidase_M16_C PF05193.21 RKO85204.1 - 1.3e-18 67.7 0.0 4.4e-11 43.1 0.0 3.6 3 1 0 3 3 3 3 Peptidase M16 inactive domain DNA_pol_phi PF04931.13 RKO85204.1 - 0.00049 18.4 16.6 0.00086 17.6 16.6 1.3 1 0 0 1 1 1 1 DNA polymerase phi CDC45 PF02724.14 RKO85204.1 - 0.77 8.0 9.2 1.2 7.3 9.2 1.2 1 0 0 1 1 1 0 CDC45-like protein Nop14 PF04147.12 RKO85204.1 - 5.6 5.0 19.1 9 4.4 19.1 1.2 1 0 0 1 1 1 0 Nop14-like family RXT2_N PF08595.11 RKO85204.1 - 6.9 6.7 9.7 18 5.3 9.7 1.7 1 0 0 1 1 1 0 RXT2-like, N-terminal NOA36 PF06524.12 RKO85204.1 - 9 5.5 19.1 17 4.6 19.1 1.4 1 0 0 1 1 1 0 NOA36 protein BUD22 PF09073.10 RKO85204.1 - 9.7 5.4 16.0 0.14 11.5 8.8 1.4 2 0 0 2 2 2 0 BUD22 DUF5327 PF17261.2 RKO85205.1 - 0.085 13.6 0.2 0.18 12.6 0.2 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5327) SOG2 PF10428.9 RKO85205.1 - 0.16 11.1 8.4 0.31 10.2 8.4 1.4 1 0 0 1 1 1 0 RAM signalling pathway protein SNF2_N PF00176.23 RKO85206.1 - 0.037 12.8 0.1 0.067 11.9 0.1 1.5 2 0 0 2 2 2 0 SNF2 family N-terminal domain Y_phosphatase3 PF13350.6 RKO85207.1 - 5.1e-37 128.1 0.0 5.8e-37 127.9 0.0 1.1 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase PF00102.27 RKO85207.1 - 0.0024 17.5 0.0 0.0033 17.0 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase DSPc PF00782.20 RKO85207.1 - 0.0028 17.5 0.0 0.005 16.7 0.0 1.4 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Myotub-related PF06602.14 RKO85207.1 - 0.0069 15.4 0.0 0.01 14.8 0.0 1.2 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain Y_phosphatase2 PF03162.13 RKO85207.1 - 0.025 14.2 0.0 0.041 13.4 0.0 1.3 1 0 0 1 1 1 0 Tyrosine phosphatase family Gag_p30 PF02093.16 RKO85207.1 - 0.13 11.8 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 Gag P30 core shell protein PTPlike_phytase PF14566.6 RKO85207.1 - 0.14 12.3 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 Inositol hexakisphosphate WD40 PF00400.32 RKO85208.1 - 2.8e-10 40.6 6.2 1e-06 29.4 0.1 4.3 4 0 0 4 4 4 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO85208.1 - 0.00012 22.3 0.0 0.15 12.3 0.0 3.7 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain PQQ_3 PF13570.6 RKO85208.1 - 0.0091 16.5 4.3 8 7.1 0.0 4.0 4 1 0 4 4 4 2 PQQ-like domain DUF3280 PF11684.8 RKO85209.1 - 4.1e-05 24.0 0.6 0.065 13.7 0.1 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF2380) Ldl_recept_b PF00058.17 RKO85209.1 - 0.0029 18.0 0.8 12 6.5 0.0 4.9 4 0 0 4 4 4 1 Low-density lipoprotein receptor repeat class B MHYT PF03707.16 RKO85209.1 - 0.63 10.2 7.0 7.2 6.9 0.8 3.3 2 0 0 2 2 2 0 Bacterial signalling protein N terminal repeat Capsid_VP7 PF17071.5 RKO85209.1 - 1.2 8.4 5.5 12 5.1 0.2 3.1 3 0 0 3 3 3 0 Outer capsid protein VP7 PilS PF08805.11 RKO85209.1 - 1.6 8.5 15.0 0.18 11.6 0.6 3.9 4 0 0 4 4 4 0 PilS N terminal SopA PF13981.6 RKO85209.1 - 2.5 8.5 5.7 44 4.5 0.0 4.1 4 0 0 4 4 4 0 SopA-like central domain ThiF PF00899.21 RKO85210.1 - 1.5e-40 139.1 0.0 2.2e-40 138.6 0.0 1.1 1 0 0 1 1 1 1 ThiF family Sacchrp_dh_NADP PF03435.18 RKO85210.1 - 0.00073 19.8 2.2 0.008 16.4 2.1 2.2 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain TrkA_N PF02254.18 RKO85210.1 - 0.012 15.8 0.1 0.037 14.3 0.1 1.9 1 1 0 1 1 1 0 TrkA-N domain AlaDh_PNT_C PF01262.21 RKO85210.1 - 0.032 13.5 0.1 0.052 12.8 0.1 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain ApbA PF02558.16 RKO85210.1 - 0.12 12.0 0.1 0.22 11.2 0.1 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA FAD_binding_3 PF01494.19 RKO85210.1 - 0.13 11.5 0.1 0.18 11.0 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain UDPG_MGDP_dh_N PF03721.14 RKO85210.1 - 0.15 11.6 0.0 0.47 10.0 0.0 1.8 1 1 1 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CagA PF03507.13 RKO85210.1 - 0.21 11.5 0.0 0.44 10.5 0.0 1.6 1 1 0 1 1 1 0 CagA exotoxin GTP_cyclohydro2 PF00925.20 RKO85213.1 - 1.2e-30 106.2 0.0 1.8e-30 105.7 0.0 1.1 1 0 0 1 1 1 1 GTP cyclohydrolase II WD40 PF00400.32 RKO85214.1 - 1.4e-16 60.6 10.4 2.3e-07 31.4 0.0 5.4 6 0 0 6 6 6 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO85214.1 - 0.0037 17.5 0.1 0.27 11.5 0.0 3.5 3 0 0 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain Adeno_PIX PF03955.14 RKO85214.1 - 0.0086 16.2 0.0 0.019 15.2 0.0 1.5 1 0 0 1 1 1 1 Adenovirus hexon-associated protein (IX) ApbA_C PF08546.11 RKO85215.1 - 1.2e-25 90.1 0.0 1.5e-25 89.8 0.0 1.1 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal PCI PF01399.27 RKO85216.1 - 8.8e-13 48.7 0.6 2e-12 47.5 0.2 1.9 2 0 0 2 2 2 1 PCI domain eIF3m_C_helix PF18005.1 RKO85216.1 - 2.8e-12 46.1 5.2 6.4e-12 45.0 5.2 1.7 1 0 0 1 1 1 1 eIF3 subunit M, C-terminal helix TFIIE_alpha PF02002.17 RKO85216.1 - 0.09 12.6 0.9 0.33 10.8 0.8 2.0 1 1 0 1 1 1 0 TFIIE alpha subunit Imm63 PF15599.6 RKO85216.1 - 0.17 12.3 1.4 0.37 11.2 0.7 1.9 2 0 0 2 2 2 0 Immunity protein 63 Thioredoxin PF00085.20 RKO85221.1 - 1.4e-12 47.5 0.0 2.2e-12 46.8 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin DUF455 PF04305.14 RKO85222.1 - 1.3e-80 270.5 0.0 1.5e-80 270.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF455) Ribosomal_S28e PF01200.18 RKO85223.1 - 0.12 12.4 4.4 0.13 12.2 2.9 1.8 2 0 0 2 2 2 0 Ribosomal protein S28e Nucleoporin_FG2 PF15967.5 RKO85224.1 - 6.1e-18 64.7 2.7 6.1e-18 64.7 2.7 3.4 1 1 2 3 3 2 1 Nucleoporin FG repeated region Nucleoporin_FG PF13634.6 RKO85224.1 - 1.1e-10 42.2 53.3 0.00025 21.8 12.8 3.9 2 1 1 3 3 3 3 Nucleoporin FG repeat region HCNGP PF07818.13 RKO85224.1 - 0.00013 22.5 2.9 0.029 15.0 0.2 3.2 2 1 1 3 3 3 1 HCNGP-like protein FliJ PF02050.16 RKO85224.1 - 0.0032 17.7 1.8 1.2 9.3 0.1 2.2 2 0 0 2 2 2 2 Flagellar FliJ protein P4Ha_N PF08336.11 RKO85224.1 - 0.0053 16.8 0.6 0.46 10.5 0.0 2.7 3 0 0 3 3 3 1 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region Pyrid_ox_like PF16242.5 RKO85224.1 - 0.02 14.5 0.0 0.031 13.9 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase like Prominin PF05478.11 RKO85224.1 - 0.063 11.2 5.9 0.27 9.2 6.0 1.7 1 1 0 1 1 1 0 Prominin CTNNBL PF08216.11 RKO85224.1 - 0.082 13.1 0.0 0.38 11.0 0.0 2.1 2 0 0 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear AAA_13 PF13166.6 RKO85224.1 - 0.1 11.3 2.9 0.2 10.3 2.7 1.4 1 1 0 1 1 1 0 AAA domain End3 PF12761.7 RKO85224.1 - 0.15 12.2 1.4 0.32 11.2 0.1 1.9 2 0 0 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 DUF2533 PF10752.9 RKO85224.1 - 0.17 12.3 0.6 0.55 10.7 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2533) ALIX_LYPXL_bnd PF13949.6 RKO85224.1 - 0.24 10.7 6.0 1.3 8.2 6.1 1.8 1 1 1 2 2 2 0 ALIX V-shaped domain binding to HIV Sec20 PF03908.13 RKO85224.1 - 1.1 9.3 5.8 0.31 11.0 1.5 2.0 2 0 0 2 2 2 0 Sec20 DUF745 PF05335.13 RKO85224.1 - 2 8.1 5.1 11 5.7 1.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF745) ATG2_CAD PF13329.6 RKO85225.1 - 1.8e-11 44.0 0.0 2e-10 40.6 0.0 2.3 2 0 0 2 2 2 1 Autophagy-related protein 2 CAD motif F-box-like PF12937.7 RKO85226.1 - 1.2e-07 31.4 0.5 3.7e-07 29.9 0.5 1.9 1 0 0 1 1 1 1 F-box-like Sugar_tr PF00083.24 RKO85227.1 - 8.5e-29 100.7 0.1 9.2e-29 100.6 0.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 RKO85227.1 - 0.0077 15.2 0.2 0.0084 15.1 0.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily EMP70 PF02990.16 RKO85229.1 - 3.2e-129 432.0 23.2 4.3e-129 431.5 23.2 1.2 1 0 0 1 1 1 1 Endomembrane protein 70 DUF1168 PF06658.12 RKO85230.1 - 2.2e-38 131.1 14.8 2.5e-38 131.0 14.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1168) NYAP_C PF15452.6 RKO85230.1 - 0.021 14.7 3.3 0.023 14.5 3.3 1.2 1 0 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter Silic_transp PF03842.13 RKO85230.1 - 0.39 8.9 1.8 0.42 8.8 1.8 1.0 1 0 0 1 1 1 0 Silicon transporter Thioredoxin PF00085.20 RKO85231.1 - 6.9e-07 29.2 0.1 9e-07 28.8 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin Adaptin_N PF01602.20 RKO85232.1 - 8.9e-79 265.4 3.2 1.3e-78 264.9 3.2 1.1 1 0 0 1 1 1 1 Adaptin N terminal region HEAT_2 PF13646.6 RKO85232.1 - 2.3e-08 34.3 3.1 0.0053 17.1 0.0 4.8 3 1 2 5 5 5 3 HEAT repeats Cnd1 PF12717.7 RKO85232.1 - 3.3e-08 33.7 5.6 2.9e-07 30.7 0.1 3.0 1 1 2 3 3 3 1 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 RKO85232.1 - 1.7e-06 27.8 2.2 0.028 14.6 0.0 4.8 4 0 0 4 4 4 2 HEAT repeat DUF5578 PF17741.1 RKO85232.1 - 0.0011 18.5 1.7 3.3 7.1 0.0 3.2 2 1 1 3 3 3 2 Family of unknown function (DUF5578) HEAT_EZ PF13513.6 RKO85232.1 - 0.0017 18.8 1.2 1.4 9.5 0.0 4.1 4 0 0 4 4 4 1 HEAT-like repeat Arm PF00514.23 RKO85232.1 - 0.14 12.3 0.1 1e+02 3.2 0.0 4.1 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat Pkinase PF00069.25 RKO85233.1 - 2.4e-73 246.8 0.0 2.8e-73 246.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO85233.1 - 1.9e-33 115.9 0.0 2.5e-33 115.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 RKO85233.1 - 0.00048 19.2 0.2 0.0012 17.9 0.2 1.6 1 1 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 RKO85233.1 - 0.053 12.9 0.0 0.095 12.0 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 RKO85233.1 - 0.094 12.0 0.0 1.3 8.3 0.0 2.1 1 1 0 2 2 2 0 Kinase-like APH PF01636.23 RKO85233.1 - 0.15 11.9 0.2 0.47 10.3 0.0 1.9 3 0 0 3 3 3 0 Phosphotransferase enzyme family cNMP_binding PF00027.29 RKO85234.1 - 3.8e-08 33.3 0.0 0.0014 18.6 0.0 3.2 3 0 0 3 3 3 2 Cyclic nucleotide-binding domain LCE6A PF15858.5 RKO85234.1 - 1.9 9.3 4.5 5.6 7.8 4.5 1.7 1 0 0 1 1 1 0 Late cornified envelope protein 6A family DUF2196 PF09962.9 RKO85237.1 - 4.9e-22 77.7 5.6 5.3e-22 77.6 5.6 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2196) SRP-alpha_N PF04086.13 RKO85238.1 - 0.12 12.3 27.9 0.02 14.8 18.8 2.3 2 0 0 2 2 2 0 Signal recognition particle, alpha subunit, N-terminal ETRAMP PF09716.10 RKO85238.1 - 0.14 12.3 1.9 0.23 11.6 1.9 1.4 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) eIF3_subunit PF08597.10 RKO85238.1 - 0.23 11.4 28.1 0.021 14.7 22.6 1.9 2 0 0 2 2 2 0 Translation initiation factor eIF3 subunit DUF5427 PF10310.9 RKO85238.1 - 0.47 9.4 16.4 0.95 8.3 16.4 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5427) FAM60A PF15396.6 RKO85238.1 - 2.7 7.9 15.2 6.3 6.7 15.2 1.6 1 0 0 1 1 1 0 Protein Family FAM60A SprA-related PF12118.8 RKO85238.1 - 5.9 5.9 17.7 14 4.7 17.7 1.5 1 0 0 1 1 1 0 SprA-related family SAPS PF04499.15 RKO85238.1 - 5.9 5.5 8.8 6.9 5.3 8.8 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Spore_YtfJ PF09579.10 RKO85240.1 - 1.3 9.3 5.4 0.39 10.9 0.7 2.2 2 0 0 2 2 2 0 Sporulation protein YtfJ (Spore_YtfJ) Anoctamin PF04547.12 RKO85240.1 - 8.7 5.0 6.3 39 2.9 4.0 2.1 2 0 0 2 2 2 0 Calcium-activated chloride channel EIF_2_alpha PF07541.12 RKO85241.1 - 1.9e-39 134.4 0.1 4.2e-39 133.2 0.1 1.6 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 RKO85241.1 - 3.7e-13 49.6 1.0 7.1e-13 48.7 1.0 1.5 1 0 0 1 1 1 1 S1 RNA binding domain UBX PF00789.20 RKO85241.1 - 0.045 14.0 0.0 0.093 12.9 0.0 1.5 1 0 0 1 1 1 0 UBX domain Spindle_Spc25 PF08234.12 RKO85241.1 - 0.1 12.8 0.1 0.29 11.4 0.1 1.8 1 1 0 1 1 1 0 Chromosome segregation protein Spc25 ABC_tran_CTD PF16326.5 RKO85241.1 - 4.7 7.5 6.1 17 5.7 2.2 2.9 2 1 0 2 2 2 0 ABC transporter C-terminal domain OAD_gamma PF04277.13 RKO85242.1 - 0.46 11.1 5.7 0.72 10.5 5.7 1.3 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain GATA PF00320.27 RKO85243.1 - 5.6e-18 64.3 4.5 6.8e-18 64.0 4.5 1.1 1 0 0 1 1 1 1 GATA zinc finger TF_Zn_Ribbon PF08271.12 RKO85243.1 - 0.00037 20.0 0.7 0.00045 19.7 0.7 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding Auto_anti-p27 PF06677.12 RKO85243.1 - 0.041 14.0 0.4 0.058 13.6 0.4 1.3 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TDP43_N PF18694.1 RKO85243.1 - 0.08 12.8 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 Transactive response DNA-binding protein N-terminal domain GATA PF00320.27 RKO85244.1 - 9.4e-16 57.1 5.7 1.3e-15 56.7 5.7 1.2 1 0 0 1 1 1 1 GATA zinc finger TF_Zn_Ribbon PF08271.12 RKO85244.1 - 0.0003 20.2 0.4 0.00047 19.6 0.4 1.4 1 1 0 1 1 1 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 RKO85244.1 - 0.0052 16.7 0.5 0.0059 16.5 0.5 1.1 1 0 0 1 1 1 1 Putative transposase DNA-binding domain DZR PF12773.7 RKO85244.1 - 0.0064 16.5 2.1 0.13 12.3 1.8 2.0 1 1 1 2 2 2 2 Double zinc ribbon Auto_anti-p27 PF06677.12 RKO85244.1 - 0.012 15.8 0.7 0.016 15.3 0.7 1.2 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) ArfGap PF01412.18 RKO85244.1 - 0.012 15.6 0.2 0.013 15.6 0.2 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf zf-ribbon_3 PF13248.6 RKO85244.1 - 0.014 14.8 3.3 0.41 10.1 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 RKO85244.1 - 0.021 14.9 0.2 0.029 14.5 0.2 1.2 1 0 0 1 1 1 0 Zinc ribbon domain DUF3039 PF11238.8 RKO85244.1 - 0.031 14.0 0.4 0.036 13.8 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3039) HIPIP PF01355.17 RKO85244.1 - 0.087 13.2 2.1 5.4 7.4 0.6 2.1 1 1 1 2 2 2 0 High potential iron-sulfur protein zf-RRN7 PF11781.8 RKO85244.1 - 0.16 11.7 1.9 12 5.7 0.1 2.2 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Vps36-NZF-N PF16988.5 RKO85244.1 - 0.27 10.7 4.6 4.2 6.8 0.5 2.1 1 1 1 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain PGI PF00342.19 RKO85246.1 - 1.5e-78 264.5 0.6 1.9e-78 264.2 0.6 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase Cyt-b5 PF00173.28 RKO85248.1 - 1.2e-11 44.6 0.0 2.5e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain FA_desaturase PF00487.24 RKO85248.1 - 2.4e-05 24.3 3.0 3.5e-05 23.8 3.0 1.2 1 0 0 1 1 1 1 Fatty acid desaturase PseudoU_synth_1 PF01416.20 RKO85249.1 - 8.1e-10 39.1 0.0 3.2e-07 30.8 0.0 2.3 2 0 0 2 2 2 2 tRNA pseudouridine synthase Cytochrome_C7 PF14522.6 RKO85250.1 - 0.55 10.3 4.3 13 5.9 0.1 2.6 2 1 1 3 3 3 0 Cytochrome c7 and related cytochrome c GON PF08685.11 RKO85254.1 - 9.9e-13 48.4 0.0 1.6e-07 31.4 0.0 2.2 1 1 1 2 2 2 2 GON domain Tocopherol_cycl PF14249.6 RKO85256.1 - 7.2e-06 25.4 0.0 0.00023 20.4 0.0 2.1 2 0 0 2 2 2 2 Tocopherol cyclase Raptor_N PF14538.6 RKO85259.1 - 2.9e-70 234.9 0.0 3.7e-70 234.6 0.0 1.1 1 0 0 1 1 1 1 Raptor N-terminal CASPase like domain DUF2347 PF09804.9 RKO85260.1 - 0.005 16.5 0.0 0.27 10.8 0.0 2.1 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2347) Kelch_4 PF13418.6 RKO85261.1 - 3.7e-07 30.1 0.4 3.7e-07 30.1 0.4 3.7 3 1 1 4 4 4 1 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO85261.1 - 6.9e-06 25.9 7.5 0.035 14.1 0.0 3.9 4 0 0 4 4 4 2 Kelch motif Kelch_2 PF07646.15 RKO85261.1 - 0.0082 16.1 3.7 3.4 7.8 0.1 3.8 3 0 0 3 3 3 2 Kelch motif Kelch_1 PF01344.25 RKO85261.1 - 0.032 13.8 12.6 0.13 11.9 0.1 4.2 4 1 0 4 4 4 0 Kelch motif Kelch_6 PF13964.6 RKO85261.1 - 0.56 10.6 14.0 0.96 9.8 0.1 4.8 6 0 0 6 6 6 0 Kelch motif DUF4217 PF13959.6 RKO85263.1 - 1e-19 70.5 0.1 1.1e-19 70.3 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) EFP PF01132.20 RKO85265.1 - 1.1e-06 28.6 0.0 1.5e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 Elongation factor P (EF-P) OB domain Elong-fact-P_C PF09285.11 RKO85266.1 - 5.8e-12 45.2 0.3 1.1e-11 44.3 0.3 1.4 1 0 0 1 1 1 1 Elongation factor P, C-terminal EFP PF01132.20 RKO85266.1 - 1.6e-11 44.0 0.0 2.9e-11 43.2 0.0 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) OB domain mono-CXXC PF15626.6 RKO85266.1 - 0.13 12.6 0.1 0.21 11.9 0.1 1.3 1 0 0 1 1 1 0 single CXXC unit DUF5435 PF17503.2 RKO85267.1 - 0.08 12.7 0.3 0.14 11.9 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5435) Cation_ATPase_C PF00689.21 RKO85268.1 - 2e-20 73.3 3.6 7.8e-12 45.3 0.2 2.3 2 0 0 2 2 2 2 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 RKO85268.1 - 2.9e-09 37.5 0.1 0.00085 19.7 0.0 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 RKO85268.1 - 2e-07 31.0 0.6 3.2e-07 30.4 0.6 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 RKO85268.1 - 0.0048 17.3 0.0 10 6.5 0.0 3.1 3 0 0 3 3 3 2 haloacid dehalogenase-like hydrolase TMEM154 PF15102.6 RKO85269.1 - 0.0082 16.1 5.6 0.0082 16.1 5.6 2.6 1 1 1 2 2 2 1 TMEM154 protein family SOG2 PF10428.9 RKO85269.1 - 2.3 7.3 30.7 0.039 13.2 17.0 2.2 2 0 0 2 2 2 0 RAM signalling pathway protein DAP10 PF07213.11 RKO85269.1 - 7.9 6.5 6.7 1.3 9.0 0.9 2.3 2 0 0 2 2 2 0 DAP10 membrane protein DER1 PF04511.15 RKO85270.1 - 1.4e-22 80.6 0.2 1.5e-22 80.4 0.2 1.0 1 0 0 1 1 1 1 Der1-like family MtrE PF04206.12 RKO85270.1 - 0.18 11.1 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit E Clathrin-link PF09268.10 RKO85271.1 - 0.08 12.3 0.0 0.22 10.9 0.0 1.7 2 0 0 2 2 2 0 Clathrin, heavy-chain linker Arf PF00025.21 RKO85273.1 - 2.2e-76 255.2 0.3 2.5e-76 255.0 0.3 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 RKO85273.1 - 1.6e-15 57.4 0.0 2.3e-15 56.9 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 RKO85273.1 - 6.4e-15 55.1 0.1 7.9e-15 54.8 0.1 1.0 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 RKO85273.1 - 3e-13 49.7 0.6 1.1e-08 34.6 0.1 2.3 1 1 1 2 2 2 2 G-protein alpha subunit SRPRB PF09439.10 RKO85273.1 - 1e-12 47.9 0.0 1.1e-12 47.7 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 RKO85273.1 - 5.8e-11 42.2 0.0 7.1e-11 41.9 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 RKO85273.1 - 4.2e-06 26.8 0.0 6.8e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 RKO85273.1 - 0.00031 20.3 0.4 0.0023 17.5 0.0 2.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain MeaB PF03308.16 RKO85273.1 - 0.00039 19.5 1.4 0.033 13.2 0.2 2.9 2 1 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 RKO85273.1 - 0.015 14.9 0.3 3.1 7.4 0.0 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain SRP54 PF00448.22 RKO85273.1 - 0.063 12.9 0.3 0.65 9.6 0.0 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain ABC_tran PF00005.27 RKO85273.1 - 0.069 13.7 0.4 0.15 12.6 0.4 1.8 1 1 0 1 1 1 0 ABC transporter AAA_18 PF13238.6 RKO85273.1 - 0.08 13.5 0.0 0.12 13.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 RKO85273.1 - 0.11 12.2 0.1 0.17 11.6 0.1 1.6 1 1 0 1 1 1 0 AAA domain FeoB_N PF02421.18 RKO85273.1 - 0.16 11.5 2.0 0.58 9.7 2.0 1.9 1 1 0 1 1 1 0 Ferrous iron transport protein B AAA_23 PF13476.6 RKO85273.1 - 0.21 12.0 0.3 0.42 11.1 0.3 1.5 1 1 0 1 1 1 0 AAA domain TBPIP PF07106.13 RKO85274.1 - 6.3e-19 67.7 0.2 1.4e-18 66.6 0.2 1.6 1 0 0 1 1 1 1 TBPIP/Hop2 winged helix domain LZ3wCH PF18517.1 RKO85274.1 - 1.2e-07 31.7 4.0 2.4e-07 30.7 4.0 1.5 1 0 0 1 1 1 1 Leucine zipper with capping helix domain Penicillinase_R PF03965.16 RKO85274.1 - 9.2e-07 29.2 0.3 8.5e-05 22.9 0.1 2.2 2 0 0 2 2 2 1 Penicillinase repressor PilJ PF13675.6 RKO85274.1 - 7.7e-05 22.7 1.2 0.00017 21.6 0.6 1.7 1 1 1 2 2 2 1 Type IV pili methyl-accepting chemotaxis transducer N-term Atg14 PF10186.9 RKO85274.1 - 0.0075 15.4 1.5 0.0089 15.2 1.5 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 ORF6C PF10552.9 RKO85274.1 - 0.0085 16.2 0.7 0.17 12.0 0.0 2.7 1 1 1 2 2 2 1 ORF6C domain Fez1 PF06818.15 RKO85274.1 - 0.025 15.1 3.7 0.034 14.6 3.7 1.2 1 0 0 1 1 1 0 Fez1 FapA PF03961.13 RKO85274.1 - 0.025 13.2 0.8 0.029 13.0 0.8 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A RRM_Rrp7 PF17799.1 RKO85274.1 - 0.038 13.8 0.1 0.064 13.1 0.1 1.4 1 0 0 1 1 1 0 Rrp7 RRM-like N-terminal domain Spc7 PF08317.11 RKO85274.1 - 0.044 12.7 5.0 0.054 12.4 5.0 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF1192 PF06698.11 RKO85274.1 - 0.047 13.8 3.7 2 8.5 2.1 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) PIN_12 PF16289.5 RKO85274.1 - 0.067 13.7 0.3 0.12 12.9 0.3 1.3 1 0 0 1 1 1 0 PIN domain TMPIT PF07851.13 RKO85274.1 - 0.072 12.3 0.3 0.094 11.9 0.3 1.1 1 0 0 1 1 1 0 TMPIT-like protein M PF02370.16 RKO85274.1 - 0.096 13.3 2.1 5.7 7.8 1.2 3.2 2 0 0 2 2 2 0 M protein repeat Med9 PF07544.13 RKO85274.1 - 0.13 12.4 1.6 0.24 11.5 0.6 1.8 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF1640 PF07798.11 RKO85274.1 - 0.17 11.9 6.3 0.54 10.3 6.2 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) YabA PF06156.13 RKO85274.1 - 0.19 12.4 1.5 0.67 10.6 1.0 2.0 2 0 0 2 2 2 0 Initiation control protein YabA Spectrin PF00435.21 RKO85274.1 - 0.19 12.2 5.7 1.8 9.1 0.8 2.4 1 1 1 2 2 2 0 Spectrin repeat TFIIE_beta PF02186.15 RKO85274.1 - 0.2 12.0 0.9 1.3 9.3 0.0 2.4 2 1 0 2 2 2 0 TFIIE beta subunit core domain DivIC PF04977.15 RKO85274.1 - 0.54 10.1 5.0 3.6 7.4 2.7 2.4 1 1 1 2 2 2 0 Septum formation initiator E3_binding PF02817.17 RKO85276.1 - 0.052 13.9 0.1 0.052 13.9 0.1 1.9 2 0 0 2 2 2 0 e3 binding domain RNA_pol_Rpc82 PF05645.13 RKO85277.1 - 3.7e-18 66.2 2.6 5.2e-18 65.7 1.5 1.8 2 1 0 2 2 2 1 RNA polymerase III subunit RPC82 TFIIE_alpha PF02002.17 RKO85277.1 - 0.00081 19.2 0.0 0.017 15.0 0.0 2.7 2 0 0 2 2 2 1 TFIIE alpha subunit MCM PF00493.23 RKO85279.1 - 8.6e-80 267.0 0.0 1.1e-78 263.5 0.0 2.0 1 1 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 RKO85279.1 - 4.8e-26 91.1 0.0 1e-25 90.0 0.0 1.5 1 0 0 1 1 1 1 MCM OB domain Mg_chelatase PF01078.21 RKO85279.1 - 8.2e-10 38.4 0.0 1.3e-06 27.9 0.0 2.2 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 RKO85279.1 - 1.5e-07 31.5 0.0 2.5e-07 30.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 RKO85279.1 - 0.0002 21.2 0.0 0.00045 20.1 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 RKO85279.1 - 0.002 17.8 0.0 0.0068 16.1 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_16 PF13191.6 RKO85279.1 - 0.0056 17.1 0.7 0.14 12.5 0.0 2.5 2 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 RKO85279.1 - 0.046 13.5 0.0 0.093 12.5 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA PF00004.29 RKO85279.1 - 0.067 13.6 0.0 0.14 12.6 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) zf-DNL PF05180.12 RKO85279.1 - 0.3 11.0 1.0 0.56 10.2 1.0 1.4 1 0 0 1 1 1 0 DNL zinc finger CPBP PF02517.16 RKO85280.1 - 1.5e-15 57.3 5.7 1.5e-15 57.3 5.7 2.2 3 0 0 3 3 3 1 CPBP intramembrane metalloprotease His_biosynth PF00977.21 RKO85281.1 - 2.8e-19 69.5 0.0 3.9e-19 69.0 0.0 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Cyclin_N PF00134.23 RKO85283.1 - 1.2e-08 34.7 0.7 4.1e-08 33.0 0.1 1.9 2 1 0 2 2 2 1 Cyclin, N-terminal domain Cyclin_C_2 PF16899.5 RKO85283.1 - 0.00042 20.7 3.5 0.00078 19.8 0.3 2.7 2 1 1 3 3 3 1 Cyclin C-terminal domain TFIIB PF00382.19 RKO85283.1 - 0.0045 17.0 0.2 0.073 13.1 0.1 2.3 2 0 0 2 2 2 1 Transcription factor TFIIB repeat p450 PF00067.22 RKO85284.1 - 1.1e-53 182.7 0.1 1.2e-53 182.6 0.1 1.0 1 0 0 1 1 1 1 Cytochrome P450 HPIH PF13323.6 RKO85285.1 - 1.6e-05 24.8 0.0 2.4e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 N-terminal domain with HPIH motif Hydrolase_4 PF12146.8 RKO85286.1 - 3.7e-47 160.6 0.2 4.3e-47 160.4 0.2 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 RKO85286.1 - 3e-10 40.2 0.1 9.3e-10 38.6 0.1 1.7 1 1 1 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 RKO85286.1 - 7.8e-10 39.7 0.9 1.1e-09 39.2 0.9 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 RKO85286.1 - 0.0041 16.9 0.3 0.025 14.4 0.0 2.4 3 0 0 3 3 3 1 Phospholipase/Carboxylesterase Thioesterase PF00975.20 RKO85286.1 - 0.036 14.2 0.0 0.049 13.7 0.0 1.2 1 0 0 1 1 1 0 Thioesterase domain Peptidase_S9 PF00326.21 RKO85286.1 - 0.05 13.1 0.6 0.083 12.3 0.6 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family Abhydrolase_3 PF07859.13 RKO85286.1 - 0.055 13.3 0.0 0.081 12.8 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold LsmAD PF06741.13 RKO85287.1 - 1.3e-21 76.9 5.2 4e-21 75.3 2.1 2.7 2 1 0 2 2 2 1 LsmAD domain SM-ATX PF14438.6 RKO85287.1 - 2.7e-18 65.9 0.6 5.8e-18 64.8 0.2 1.7 2 0 0 2 2 2 1 Ataxin 2 SM domain LSM14 PF12701.7 RKO85287.1 - 0.13 12.4 0.1 0.24 11.5 0.1 1.4 1 0 0 1 1 1 0 Scd6-like Sm domain bZIP_2 PF07716.15 RKO85288.1 - 0.5 10.5 10.5 0.18 11.9 7.3 1.9 2 0 0 2 2 2 0 Basic region leucine zipper Cep57_CLD_2 PF14197.6 RKO85288.1 - 1.3 9.1 9.4 0.88 9.7 5.0 2.3 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 DUF1640 PF07798.11 RKO85288.1 - 1.8 8.6 8.0 0.69 9.9 2.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1640) AAA_23 PF13476.6 RKO85288.1 - 3.9 7.9 6.1 6.1 7.3 6.1 1.3 1 0 0 1 1 1 0 AAA domain LAP1C PF05609.12 RKO85288.1 - 9.5 5.2 12.5 0.25 10.4 4.3 1.9 1 1 0 2 2 2 0 Lamina-associated polypeptide 1C (LAP1C) Pribosyltran PF00156.27 RKO85289.1 - 2.1e-05 24.1 0.0 2.6e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyltran PF00156.27 RKO85290.1 - 2.1e-05 24.1 0.0 2.6e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Ribosomal_S19 PF00203.21 RKO85291.1 - 2.4e-36 123.5 1.1 3.4e-36 123.0 1.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S19 FliH PF02108.16 RKO85291.1 - 0.12 12.4 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Flagellar assembly protein FliH PP2C PF00481.21 RKO85293.1 - 5.8e-32 111.3 0.0 8.2e-32 110.8 0.0 1.2 1 0 0 1 1 1 1 Protein phosphatase 2C SAD_SRA PF02182.17 RKO85294.1 - 3.2e-51 173.1 0.0 5.4e-51 172.4 0.0 1.4 1 0 0 1 1 1 1 SAD/SRA domain zf-C3HC4_2 PF13923.6 RKO85294.1 - 2e-07 30.7 13.1 3.7e-07 29.9 13.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 RKO85294.1 - 2.9e-07 30.5 12.4 5.5e-07 29.6 12.4 1.5 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 RKO85294.1 - 9.6e-07 28.6 10.1 2e-06 27.6 10.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO85294.1 - 5.5e-06 26.2 15.3 1e-05 25.3 15.3 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 RKO85294.1 - 8.8e-06 26.0 12.6 1.6e-05 25.1 12.6 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 RKO85294.1 - 5.5e-05 23.1 11.4 0.00011 22.2 11.4 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 RKO85294.1 - 0.0011 18.9 12.9 0.0022 17.9 12.9 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_10 PF16685.5 RKO85294.1 - 0.0013 18.8 9.0 0.0025 17.9 9.0 1.4 1 0 0 1 1 1 1 zinc RING finger of MSL2 zf-RING_4 PF14570.6 RKO85294.1 - 0.0085 15.9 7.7 0.019 14.8 7.7 1.6 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain Mpp10 PF04006.12 RKO85294.1 - 0.011 14.2 7.0 0.016 13.7 7.0 1.1 1 0 0 1 1 1 0 Mpp10 protein zf-RING_6 PF14835.6 RKO85294.1 - 0.083 12.8 4.8 0.18 11.7 4.8 1.5 1 0 0 1 1 1 0 zf-RING of BARD1-type protein Prok-RING_4 PF14447.6 RKO85294.1 - 0.17 11.8 11.0 0.35 10.8 11.0 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 CDC45 PF02724.14 RKO85294.1 - 1.3 7.2 6.6 1.8 6.8 6.6 1.1 1 0 0 1 1 1 0 CDC45-like protein Nop14 PF04147.12 RKO85294.1 - 9.3 4.3 11.6 13 3.8 11.6 1.1 1 0 0 1 1 1 0 Nop14-like family FmiP_Thoc5 PF09766.9 RKO85295.1 - 0.31 10.3 4.4 0.63 9.3 4.4 1.5 1 1 0 1 1 1 0 Fms-interacting protein/Thoc5 YjbH PF06082.11 RKO85295.1 - 3.2 6.4 3.9 4.1 6.1 3.9 1.0 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH Fasciclin PF02469.22 RKO85296.1 - 4.8e-25 88.2 0.4 1.1e-19 70.9 0.1 2.0 2 0 0 2 2 2 2 Fasciclin domain CorA PF01544.18 RKO85299.1 - 8.9e-34 117.1 1.0 1e-33 116.9 1.0 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein P53 PF00870.18 RKO85299.1 - 0.01 15.6 0.0 0.014 15.2 0.0 1.2 1 0 0 1 1 1 0 P53 DNA-binding domain Synaptobrevin PF00957.21 RKO85300.1 - 4.2e-07 29.7 0.2 5.5e-07 29.3 0.2 1.2 1 0 0 1 1 1 1 Synaptobrevin HSP9_HSP12 PF04119.12 RKO85300.1 - 0.061 13.7 0.1 0.14 12.6 0.1 1.5 1 0 0 1 1 1 0 Heat shock protein 9/12 TetR_C_32 PF09209.11 RKO85300.1 - 0.13 12.2 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain WD40 PF00400.32 RKO85301.1 - 0.0092 16.8 5.5 13 6.8 0.1 4.3 4 0 0 4 4 4 2 WD domain, G-beta repeat YmzC PF14157.6 RKO85301.1 - 0.075 13.1 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 YmzC-like protein Exostosin PF03016.15 RKO85302.1 - 1.2e-19 70.7 0.2 1.4e-19 70.4 0.2 1.1 1 0 0 1 1 1 1 Exostosin family CUB PF00431.20 RKO85303.1 - 9.6e-06 25.9 0.0 1.6e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 CUB domain EGF_Tenascin PF18720.1 RKO85303.1 - 0.0018 18.2 9.7 0.0025 17.8 7.9 2.3 2 0 0 2 2 2 1 Tenascin EGF domain TIG PF01833.24 RKO85303.1 - 0.0091 16.0 0.7 0.0091 16.0 0.7 2.7 2 1 1 3 3 3 1 IPT/TIG domain EGF_2 PF07974.13 RKO85303.1 - 0.021 15.2 11.3 0.052 13.9 11.3 1.7 1 0 0 1 1 1 0 EGF-like domain LRR_8 PF13855.6 RKO85303.1 - 0.039 13.7 3.9 0.13 12.0 4.2 1.8 1 1 0 1 1 1 0 Leucine rich repeat LRR_1 PF00560.33 RKO85303.1 - 0.35 11.6 2.1 50 5.0 0.1 3.5 4 0 0 4 4 4 0 Leucine Rich Repeat Peptidase_M1_N PF17900.1 RKO85307.1 - 1.2e-14 55.0 0.0 2.4e-14 54.0 0.0 1.5 1 1 0 1 1 1 1 Peptidase M1 N-terminal domain Peptidase_M1 PF01433.20 RKO85307.1 - 6.2e-11 42.3 0.0 8.5e-11 41.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M1 domain DUF3510 PF12022.8 RKO85313.1 - 0.006 17.0 5.1 0.0088 16.4 5.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3510) Peptidase_M2 PF01401.18 RKO85313.1 - 0.34 9.5 3.0 0.38 9.3 3.0 1.0 1 0 0 1 1 1 0 Angiotensin-converting enzyme Myb_DNA-binding PF00249.31 RKO85315.1 - 4.9e-09 36.2 3.8 5.1e-09 36.2 0.2 2.3 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO85315.1 - 4.3e-07 30.1 1.4 9.3e-07 29.0 1.1 1.7 1 1 0 1 1 1 1 Myb-like DNA-binding domain SWIRM-assoc_2 PF16496.5 RKO85315.1 - 0.0024 16.8 2.8 0.0027 16.7 2.8 1.1 1 0 0 1 1 1 1 SWIRM-associated domain at the N-terminal TusA PF01206.17 RKO85316.1 - 0.2 11.5 0.4 0.51 10.2 0.1 1.7 2 0 0 2 2 2 0 Sulfurtransferase TusA PEPCK_N PF17297.2 RKO85316.1 - 0.23 11.1 0.0 0.35 10.5 0.0 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxykinase N-terminal domain Cyclin_N PF00134.23 RKO85318.1 - 1.1e-12 47.9 1.3 4.8e-12 45.7 1.3 1.8 1 1 0 1 1 1 1 Cyclin, N-terminal domain TFIIB PF00382.19 RKO85318.1 - 0.01 15.8 0.1 0.016 15.2 0.1 1.4 1 1 0 1 1 1 0 Transcription factor TFIIB repeat Helicase_C_2 PF13307.6 RKO85320.1 - 2.4e-32 112.4 0.0 7.9e-22 78.2 0.0 2.2 2 0 0 2 2 2 2 Helicase C-terminal domain Zip PF02535.22 RKO85321.1 - 6.6e-50 170.2 16.2 7.5e-50 170.0 16.2 1.0 1 0 0 1 1 1 1 ZIP Zinc transporter MDM10 PF12519.8 RKO85322.1 - 1.2e-42 146.4 0.1 1.6e-38 132.8 0.0 3.6 1 1 1 2 2 2 2 Mitochondrial distribution and morphology protein 10 Porin_3 PF01459.22 RKO85322.1 - 2.3e-06 27.3 0.3 5.5e-06 26.1 0.2 1.7 2 1 0 2 2 2 1 Eukaryotic porin DEAD_2 PF06733.15 RKO85323.1 - 1.8e-12 47.3 0.0 2.1e-12 47.0 0.0 1.1 1 0 0 1 1 1 1 DEAD_2 ResIII PF04851.15 RKO85323.1 - 0.0069 16.4 0.0 0.0069 16.4 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DUF2075 PF09848.9 RKO85323.1 - 0.075 12.3 0.0 0.08 12.2 0.0 1.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Exog_C PF18026.1 RKO85323.1 - 0.09 12.8 0.1 0.14 12.2 0.1 1.3 1 0 0 1 1 1 0 Endo/exonuclease (EXOG) C-terminal domain RNA_pol_Rpb2_6 PF00562.28 RKO85324.1 - 1.2e-65 222.1 0.4 1.7e-65 221.6 0.4 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 RKO85324.1 - 5.3e-09 36.4 1.8 9.4e-09 35.6 0.7 2.0 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 7 Mgm101p PF06420.12 RKO85326.1 - 2.8e-30 105.1 0.0 3e-30 105.0 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial genome maintenance MGM101 NopRA1 PF16201.5 RKO85327.1 - 0.062 12.9 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Nucleolar pre-ribosomal-associated protein 1 Coiled PF05710.12 RKO85327.1 - 0.094 13.5 1.9 0.7 10.8 0.7 2.4 1 1 1 2 2 2 0 Coiled coil RhoGAP PF00620.27 RKO85329.1 - 3.1e-06 27.1 0.0 4.5e-05 23.3 0.0 2.1 1 1 0 1 1 1 1 RhoGAP domain zf-RING_7 PF02591.15 RKO85329.1 - 0.041 14.1 0.4 0.24 11.6 0.1 2.3 2 0 0 2 2 2 0 C4-type zinc ribbon domain PQQ_2 PF13360.6 RKO85330.1 - 4e-05 23.3 3.9 0.0025 17.4 3.9 2.6 1 1 0 1 1 1 1 PQQ-like domain WD40 PF00400.32 RKO85330.1 - 0.0013 19.5 4.9 0.14 13.1 0.1 4.8 5 1 0 5 5 5 1 WD domain, G-beta repeat SGL PF08450.12 RKO85330.1 - 0.022 14.4 0.0 0.47 10.0 0.0 2.6 2 1 1 3 3 3 0 SMP-30/Gluconolactonase/LRE-like region ANAPC4_WD40 PF12894.7 RKO85330.1 - 0.028 14.7 0.0 9.9 6.5 0.0 2.8 1 1 2 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain SH3_6 PF12913.7 RKO85330.1 - 0.076 12.6 0.0 4.6 6.9 0.0 3.1 3 0 0 3 3 3 0 SH3 domain (SH3b1 type) PD40 PF07676.12 RKO85330.1 - 0.11 12.5 2.4 73 3.5 0.0 5.0 6 0 0 6 6 6 0 WD40-like Beta Propeller Repeat PQQ_3 PF13570.6 RKO85330.1 - 0.12 12.9 0.3 0.12 12.9 0.3 5.9 4 3 2 6 6 6 0 PQQ-like domain Lactonase PF10282.9 RKO85330.1 - 0.2 10.9 0.0 20 4.3 0.0 3.0 1 1 2 3 3 3 0 Lactonase, 7-bladed beta-propeller Hist_deacetyl PF00850.19 RKO85331.1 - 5.4e-70 236.3 0.1 1.9e-68 231.2 0.1 2.1 1 1 0 1 1 1 1 Histone deacetylase domain Arb2 PF09757.9 RKO85331.1 - 0.0077 15.4 0.0 0.014 14.5 0.0 1.4 1 0 0 1 1 1 1 Arb2 domain Tyrosinase PF00264.20 RKO85332.1 - 3e-05 24.4 8.5 0.00022 21.6 8.5 2.0 1 1 0 1 1 1 1 Common central domain of tyrosinase AMP-binding PF00501.28 RKO85333.1 - 8e-51 172.9 0.0 1.3e-50 172.3 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 RKO85333.1 - 1.7e-12 48.1 1.6 2.9e-06 28.2 0.7 2.7 2 0 0 2 2 2 2 AMP-binding enzyme C-terminal domain PP-binding PF00550.25 RKO85333.1 - 2.4e-10 40.6 0.0 4.8e-10 39.7 0.0 1.6 1 0 0 1 1 1 1 Phosphopantetheine attachment site GH3 PF03321.13 RKO85333.1 - 0.062 12.1 0.0 0.11 11.3 0.0 1.3 1 0 0 1 1 1 0 GH3 auxin-responsive promoter WD40 PF00400.32 RKO85334.1 - 1.2e-15 57.6 3.9 6.2e-05 23.7 0.0 3.1 3 0 0 3 3 3 3 WD domain, G-beta repeat Gmad1 PF10647.9 RKO85334.1 - 3.4e-05 23.7 1.1 3.5e-05 23.7 1.1 1.1 1 0 0 1 1 1 1 Lipoprotein LpqB beta-propeller domain ANAPC4_WD40 PF12894.7 RKO85334.1 - 5.6e-05 23.4 0.1 0.0062 16.8 0.1 2.3 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 RKO85334.1 - 0.031 13.2 0.1 0.044 12.7 0.1 1.5 1 1 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein eIF2A PF08662.11 RKO85334.1 - 0.096 12.6 0.0 0.13 12.1 0.0 1.3 1 1 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A IDO PF01231.18 RKO85335.1 - 7.9e-07 28.2 0.0 9.1e-07 28.0 0.0 1.1 1 0 0 1 1 1 1 Indoleamine 2,3-dioxygenase tRNA-synt_1c_C PF03950.18 RKO85336.1 - 9.5e-33 113.5 0.1 1.8e-32 112.6 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA_bind PF01588.20 RKO85336.1 - 1.1e-29 102.3 0.1 2e-29 101.5 0.1 1.4 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_1c PF00749.21 RKO85336.1 - 2e-14 53.2 0.0 3e-14 52.6 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain Piwi PF02171.17 RKO85339.1 - 1.3e-48 165.8 0.0 1.8e-48 165.3 0.0 1.1 1 0 0 1 1 1 1 Piwi domain 6PGD PF00393.19 RKO85340.1 - 1.5e-128 428.2 0.0 1.9e-128 427.9 0.0 1.1 1 0 0 1 1 1 1 6-phosphogluconate dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 RKO85340.1 - 2e-51 174.3 0.0 2.9e-51 173.8 0.0 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 RKO85340.1 - 0.0017 18.9 0.0 0.004 17.7 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_11 PF14833.6 RKO85340.1 - 0.021 15.1 0.0 0.048 13.9 0.0 1.6 1 0 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TrbH PF07283.11 RKO85340.1 - 0.1 12.8 0.1 0.53 10.5 0.0 2.2 3 0 0 3 3 3 0 Conjugal transfer protein TrbH Fasciclin PF02469.22 RKO85341.1 - 8.8e-22 77.7 0.0 8.9e-12 45.4 0.0 2.3 2 0 0 2 2 2 2 Fasciclin domain FHA PF00498.26 RKO85342.1 - 4.6e-13 49.3 0.0 7.1e-13 48.7 0.0 1.3 1 0 0 1 1 1 1 FHA domain Rad51 PF08423.11 RKO85343.1 - 8.4e-31 107.1 1.8 1.4e-30 106.4 1.8 1.3 1 0 0 1 1 1 1 Rad51 HHH_5 PF14520.6 RKO85343.1 - 2.8e-06 27.9 0.8 5e-06 27.0 0.8 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix domain RecA PF00154.21 RKO85343.1 - 0.00022 20.8 0.2 0.00034 20.2 0.1 1.4 1 1 0 1 1 1 1 recA bacterial DNA recombination protein ATPase PF06745.13 RKO85343.1 - 0.0072 15.7 1.1 0.011 15.1 0.1 1.6 2 0 0 2 2 2 1 KaiC PUA PF01472.20 RKO85343.1 - 0.014 15.4 1.3 1.1 9.3 0.1 2.2 1 1 1 2 2 2 0 PUA domain HlyD_D4 PF16572.5 RKO85343.1 - 0.029 14.2 0.3 6 6.8 0.1 2.3 2 0 0 2 2 2 0 Long alpha hairpin domain of cation efflux system protein, CusB PAXNEB PF05625.11 RKO85343.1 - 0.037 13.2 0.0 0.053 12.7 0.0 1.2 1 0 0 1 1 1 0 PAXNEB protein DUF347 PF03988.12 RKO85347.1 - 0.022 14.9 0.7 0.029 14.5 0.7 1.2 1 0 0 1 1 1 0 Repeat of Unknown Function (DUF347) DAP10 PF07213.11 RKO85347.1 - 0.95 9.5 3.7 1.2 9.1 2.0 1.9 1 1 1 2 2 2 0 DAP10 membrane protein PsbX PF06596.11 RKO85347.1 - 1.3 9.1 5.4 3 7.9 5.4 1.6 1 0 0 1 1 1 0 Photosystem II reaction centre X protein (PsbX) DUF2442 PF10387.9 RKO85348.1 - 0.034 14.4 0.2 0.86 10.0 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2442) Glyco_hydro_43 PF04616.14 RKO85349.1 - 2e-30 106.1 0.4 2.7e-30 105.7 0.4 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 43 Glyco_hydro_43 PF04616.14 RKO85350.1 - 2e-30 106.1 0.4 2.7e-30 105.7 0.4 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 43 RHSP PF07999.11 RKO85351.1 - 0.27 10.0 0.0 0.38 9.5 0.0 1.1 1 0 0 1 1 1 0 Retrotransposon hot spot protein FAD_binding_3 PF01494.19 RKO85352.1 - 1e-10 41.4 0.5 5e-05 22.7 0.4 3.2 3 0 0 3 3 3 3 FAD binding domain DAO PF01266.24 RKO85352.1 - 0.00072 19.2 0.3 0.0018 17.9 0.3 1.7 1 0 0 1 1 1 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 RKO85352.1 - 0.0042 16.4 0.3 0.3 10.3 0.0 2.2 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_2 PF07992.14 RKO85352.1 - 0.026 13.8 0.1 0.04 13.1 0.1 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 RKO85352.1 - 0.055 13.7 0.5 0.055 13.7 0.5 2.0 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 RKO85352.1 - 0.078 12.0 0.5 0.11 11.5 0.5 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A Lycopene_cycl PF05834.12 RKO85352.1 - 0.12 11.4 0.1 0.27 10.2 0.1 1.6 1 0 0 1 1 1 0 Lycopene cyclase protein Trp_halogenase PF04820.14 RKO85352.1 - 0.23 10.3 0.9 0.34 9.7 0.9 1.2 1 0 0 1 1 1 0 Tryptophan halogenase FAD_binding_2 PF00890.24 RKO85352.1 - 0.51 9.4 3.9 0.95 8.5 3.9 1.4 1 0 0 1 1 1 0 FAD binding domain NTP_transf_2 PF01909.23 RKO85355.1 - 0.0025 18.1 0.0 0.0037 17.5 0.0 1.3 1 1 0 1 1 1 1 Nucleotidyltransferase domain DUF4707 PF15806.5 RKO85355.1 - 0.0079 15.2 0.0 0.0098 14.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4707) SrfB PF07520.11 RKO85355.1 - 0.035 12.0 0.0 0.035 12.0 0.0 1.0 1 0 0 1 1 1 0 Virulence factor SrfB SMP_C2CD2L PF18696.1 RKO85355.1 - 0.064 13.1 0.1 0.18 11.7 0.1 1.6 2 0 0 2 2 2 0 Synaptotagmin-like, mitochondrial and lipid-binding domain SMODS PF18144.1 RKO85355.1 - 0.076 13.2 0.0 0.093 12.9 0.0 1.1 1 0 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain Nop53 PF07767.11 RKO85356.1 - 8.3e-32 111.1 3.6 9.2e-32 110.9 3.6 1.0 1 0 0 1 1 1 1 Nop53 (60S ribosomal biogenesis) Reeler PF02014.16 RKO85358.1 - 2.8e-07 31.3 0.0 4e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Reeler domain ABC_membrane PF00664.23 RKO85359.1 - 3.8e-21 76.0 7.3 5.9e-21 75.3 7.3 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 RKO85359.1 - 1.9e-05 25.2 0.0 4e-05 24.2 0.0 1.6 1 0 0 1 1 1 1 ABC transporter Gp5_OB PF06714.11 RKO85359.1 - 0.23 11.7 0.3 0.45 10.7 0.3 1.4 1 0 0 1 1 1 0 Gp5 N-terminal OB domain Zmiz1_N PF18028.1 RKO85360.1 - 2.5e-12 47.0 0.0 4.9e-12 46.0 0.0 1.4 1 0 0 1 1 1 1 Zmiz1 N-terminal tetratricopeptide repeat domain DEAD PF00270.29 RKO85363.1 - 4.3e-13 49.4 0.2 4.3e-13 49.4 0.2 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 RKO85363.1 - 0.027 14.5 0.0 0.027 14.5 0.0 1.1 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit HA2 PF04408.23 RKO85364.1 - 3.4e-21 75.6 0.0 7e-21 74.5 0.0 1.6 1 0 0 1 1 1 1 Helicase associated domain (HA2) Helicase_C PF00271.31 RKO85364.1 - 7.5e-12 45.6 0.0 3.8e-11 43.3 0.0 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain OB_NTP_bind PF07717.16 RKO85364.1 - 2.9e-11 43.6 0.0 7e-11 42.3 0.0 1.6 1 1 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold DNA_pol_phi PF04931.13 RKO85364.1 - 6.9 4.6 11.4 11 3.9 11.4 1.2 1 0 0 1 1 1 0 DNA polymerase phi SIR2 PF02146.17 RKO85366.1 - 7.6e-07 29.2 0.1 1.2e-06 28.6 0.1 1.3 1 0 0 1 1 1 1 Sir2 family PAC2 PF09754.9 RKO85366.1 - 0.00088 19.3 0.0 0.001 19.1 0.0 1.0 1 0 0 1 1 1 1 PAC2 family SIR2 PF02146.17 RKO85367.1 - 2.8e-22 79.5 0.0 1.8e-12 47.6 0.0 2.2 2 0 0 2 2 2 2 Sir2 family Costars PF14705.6 RKO85368.1 - 8.9e-27 93.1 0.3 9.9e-27 92.9 0.3 1.0 1 0 0 1 1 1 1 Costars V-ATPase_G PF03179.15 RKO85369.1 - 9.9e-31 106.4 11.5 1.2e-30 106.1 11.5 1.1 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit 4HB_MCP_1 PF12729.7 RKO85369.1 - 0.056 13.0 6.1 0.091 12.3 6.0 1.3 1 1 0 1 1 1 0 Four helix bundle sensory module for signal transduction FliD_N PF02465.18 RKO85369.1 - 0.3 11.8 5.7 0.16 12.7 3.5 1.6 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus DUF4407 PF14362.6 RKO85369.1 - 0.32 10.3 8.0 0.39 10.0 8.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ATP-synt_B PF00430.18 RKO85369.1 - 0.4 10.8 19.8 0.16 12.0 17.1 1.6 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) Oxidored_FMN PF00724.20 RKO85370.1 - 1.4e-60 205.4 0.0 2.2e-59 201.4 0.0 1.9 1 1 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family His_Phos_2 PF00328.22 RKO85371.1 - 0.0072 15.7 0.0 0.008 15.6 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) Orthopox_A5L PF06193.11 RKO85371.1 - 0.13 11.7 0.6 0.14 11.6 0.6 1.2 1 0 0 1 1 1 0 Orthopoxvirus A5L protein-like Cytochrom_B561 PF03188.16 RKO85372.1 - 3.3e-05 24.0 8.2 3.3e-05 24.0 8.2 2.5 2 1 1 3 3 3 1 Eukaryotic cytochrome b561 DOMON PF03351.17 RKO85372.1 - 0.063 13.5 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 DOMON domain SH3_9 PF14604.6 RKO85373.1 - 3.7e-05 23.5 0.0 7.9e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain FA_desaturase PF00487.24 RKO85374.1 - 9.1e-14 51.9 24.1 1.5e-13 51.2 24.1 1.4 1 0 0 1 1 1 1 Fatty acid desaturase Cyt-b5 PF00173.28 RKO85374.1 - 1.1e-11 44.7 0.0 2.2e-11 43.7 0.0 1.6 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain PB1 PF00564.24 RKO85375.1 - 1.5e-14 53.7 0.0 2.3e-14 53.1 0.0 1.3 1 0 0 1 1 1 1 PB1 domain HEPN_RES_NTD1 PF18870.1 RKO85375.1 - 0.18 12.0 0.0 0.26 11.5 0.0 1.2 1 0 0 1 1 1 0 HEPN/RES N-terminal domain 1 Cellulase PF00150.18 RKO85376.1 - 1.7e-12 47.4 0.0 1.8e-12 47.3 0.0 1.0 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) UTP25 PF06862.12 RKO85378.1 - 1.1e-16 60.8 0.5 1.3e-16 60.4 0.5 1.1 1 0 0 1 1 1 1 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 BUD22 PF09073.10 RKO85378.1 - 0.0047 16.3 13.9 0.0056 16.1 13.9 1.1 1 0 0 1 1 1 1 BUD22 SAC3_GANP PF03399.16 RKO85378.1 - 0.12 11.8 0.3 0.22 10.9 0.1 1.5 2 0 0 2 2 2 0 SAC3/GANP family DUF2457 PF10446.9 RKO85378.1 - 0.19 10.9 15.9 0.29 10.3 15.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) Cwf_Cwc_15 PF04889.12 RKO85378.1 - 7 6.3 16.3 2.3 7.9 13.3 1.7 2 0 0 2 2 2 0 Cwf15/Cwc15 cell cycle control protein HTH_24 PF13412.6 RKO85380.1 - 0.0016 18.0 0.1 0.0051 16.3 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding NAD_binding_2 PF03446.15 RKO85383.1 - 1.4e-45 155.3 0.6 2.3e-45 154.6 0.6 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 RKO85383.1 - 2.4e-31 108.5 0.1 4.3e-31 107.7 0.1 1.4 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 RKO85383.1 - 4.9e-07 30.2 0.0 2.5e-06 28.0 0.0 2.0 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent OCD_Mu_crystall PF02423.15 RKO85383.1 - 0.0065 15.4 0.2 0.0095 14.9 0.2 1.2 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family GFO_IDH_MocA PF01408.22 RKO85383.1 - 0.056 14.3 0.0 0.11 13.3 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold PDH PF02153.17 RKO85383.1 - 0.12 11.4 0.2 0.18 10.8 0.2 1.2 1 0 0 1 1 1 0 Prephenate dehydrogenase UDPG_MGDP_dh_N PF03721.14 RKO85383.1 - 0.15 11.6 0.1 3.6 7.1 0.0 2.4 2 1 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Arm_2 PF04826.13 RKO85383.1 - 0.23 10.9 0.0 0.36 10.2 0.0 1.2 1 0 0 1 1 1 0 Armadillo-like ApbA_C PF08546.11 RKO85384.1 - 1e-21 77.4 0.0 1.6e-21 76.8 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal ApbA PF02558.16 RKO85384.1 - 3.6e-15 55.9 0.1 4.8e-15 55.5 0.1 1.2 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 RKO85384.1 - 0.21 12.2 5.8 0.97 10.1 3.3 2.8 2 1 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent TPR_19 PF14559.6 RKO85385.1 - 0.18 12.3 2.1 5.6 7.6 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_4 PF07721.14 RKO85385.1 - 0.4 11.4 5.7 11 7.0 0.1 4.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO85385.1 - 8.3 7.5 12.0 6 8.0 0.4 4.8 4 1 1 5 5 5 0 Tetratricopeptide repeat RhoGEF PF00621.20 RKO85386.1 - 5.8e-44 150.5 0.0 7.5e-44 150.1 0.0 1.1 1 0 0 1 1 1 1 RhoGEF domain SH3_9 PF14604.6 RKO85386.1 - 2e-21 75.6 0.9 2.4e-10 40.1 0.1 2.5 2 0 0 2 2 2 2 Variant SH3 domain SH3_1 PF00018.28 RKO85386.1 - 2.5e-21 75.0 0.1 8.2e-11 41.3 0.0 2.3 2 0 0 2 2 2 2 SH3 domain SH3_2 PF07653.17 RKO85386.1 - 2.1e-18 65.8 0.0 1e-09 37.9 0.0 2.4 2 0 0 2 2 2 2 Variant SH3 domain PH_13 PF16652.5 RKO85386.1 - 2.4e-15 56.7 0.0 4.8e-15 55.7 0.0 1.5 1 0 0 1 1 1 1 Pleckstrin homology domain SH3_3 PF08239.11 RKO85386.1 - 0.00035 20.8 0.2 0.46 10.8 0.0 2.6 2 0 0 2 2 2 2 Bacterial SH3 domain SH3_10 PF17902.1 RKO85386.1 - 0.025 14.6 0.0 0.058 13.5 0.0 1.6 1 0 0 1 1 1 0 SH3 domain PH PF00169.29 RKO85386.1 - 0.048 14.2 0.0 0.17 12.4 0.0 1.9 2 0 0 2 2 2 0 PH domain PH_5 PF15405.6 RKO85386.1 - 0.054 13.6 0.1 7.8 6.6 0.0 2.4 2 0 0 2 2 2 0 Pleckstrin homology domain OB_NTP_bind PF07717.16 RKO85387.1 - 2.3e-23 82.3 0.0 5e-23 81.3 0.0 1.5 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold HA2 PF04408.23 RKO85387.1 - 5.9e-20 71.6 0.0 1.3e-19 70.5 0.0 1.6 1 0 0 1 1 1 1 Helicase associated domain (HA2) Helicase_C PF00271.31 RKO85387.1 - 1.4e-15 57.6 0.0 3.5e-15 56.3 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Phage_tail_L PF05100.12 RKO85387.1 - 0.11 11.9 0.0 0.18 11.1 0.0 1.3 1 0 0 1 1 1 0 Phage minor tail protein L Tropomyosin PF00261.20 RKO85388.1 - 0.0053 16.2 41.4 0.0053 16.2 41.4 4.9 2 2 1 4 4 4 3 Tropomyosin DUF2353 PF09789.9 RKO85388.1 - 0.0078 15.6 4.2 0.0078 15.6 4.2 3.4 2 1 2 4 4 4 1 Uncharacterized coiled-coil protein (DUF2353) MscS_porin PF12795.7 RKO85388.1 - 0.011 15.3 51.9 0.31 10.6 6.7 4.8 1 1 2 4 4 4 0 Mechanosensitive ion channel porin domain Cep57_CLD_2 PF14197.6 RKO85388.1 - 0.018 15.1 4.5 0.018 15.1 4.5 7.9 6 3 3 9 9 9 0 Centrosome localisation domain of PPC89 Fez1 PF06818.15 RKO85388.1 - 0.061 13.8 39.3 1.4 9.3 4.8 5.2 1 1 3 4 4 4 0 Fez1 ATG16 PF08614.11 RKO85388.1 - 0.16 12.2 60.7 0.49 10.6 9.4 4.6 2 1 2 4 4 4 0 Autophagy protein 16 (ATG16) Sugarporin_N PF11471.8 RKO85388.1 - 1.4 8.9 0.0 1.4 8.9 0.0 7.7 8 1 0 8 8 8 0 Maltoporin periplasmic N-terminal extension Sas10 PF09368.10 RKO85390.1 - 0.14 12.6 0.2 0.29 11.7 0.2 1.4 1 0 0 1 1 1 0 Sas10 C-terminal domain fn3 PF00041.21 RKO85392.1 - 8.4e-14 51.7 0.3 2.3e-07 31.1 0.1 5.0 5 0 0 5 5 5 2 Fibronectin type III domain Pur_ac_phosph_N PF16656.5 RKO85392.1 - 0.03 14.9 0.0 3.3 8.3 0.0 2.5 2 0 0 2 2 2 0 Purple acid Phosphatase, N-terminal domain fn3_4 PF16794.5 RKO85392.1 - 0.041 13.8 0.0 0.35 10.8 0.0 2.2 2 0 0 2 2 2 0 Fibronectin-III type domain Glyco_transf_21 PF13506.6 RKO85392.1 - 0.045 13.2 0.1 0.1 12.1 0.1 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 21 OMS28_porin PF03532.13 RKO85392.1 - 0.13 11.5 0.1 0.24 10.6 0.1 1.3 1 0 0 1 1 1 0 OMS28 porin Asp PF00026.23 RKO85393.1 - 2e-19 70.1 3.2 2.6e-19 69.8 3.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO85393.1 - 5e-06 26.9 3.7 0.0012 19.2 3.7 2.3 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal SDA1 PF05285.12 RKO85395.1 - 7.2 5.9 11.4 10 5.4 11.4 1.1 1 0 0 1 1 1 0 SDA1 Ald_Xan_dh_C2 PF02738.18 RKO85396.1 - 5.3e-92 309.1 0.0 6.9e-92 308.7 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 RKO85396.1 - 2e-31 108.6 0.7 4.8e-31 107.4 0.1 2.0 2 0 0 2 2 2 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CO_deh_flav_C PF03450.17 RKO85396.1 - 4.1e-12 46.2 0.1 1.4e-11 44.5 0.0 2.0 2 0 0 2 2 2 1 CO dehydrogenase flavoprotein C-terminal domain Helicase_C_3 PF13625.6 RKO85399.1 - 7e-27 94.1 0.0 1.5e-25 89.8 0.0 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain IFT20 PF14931.6 RKO85400.1 - 1.8e-31 108.8 8.0 2e-31 108.6 8.0 1.0 1 0 0 1 1 1 1 Intraflagellar transport complex B, subunit 20 Alpha-2-MRAP_C PF06401.11 RKO85400.1 - 0.0025 17.8 3.1 0.0029 17.6 3.1 1.0 1 0 0 1 1 1 1 Alpha-2-macroglobulin RAP, C-terminal domain CSN7a_helixI PF18392.1 RKO85400.1 - 0.51 10.3 3.1 0.24 11.3 1.0 1.6 2 0 0 2 2 2 0 COP9 signalosome complex subunit 7a helix I domain ABC2_membrane PF01061.24 RKO85403.1 - 3.3e-38 131.2 15.6 4.1e-38 130.9 15.6 1.1 1 0 0 1 1 1 1 ABC-2 type transporter ABC_tran PF00005.27 RKO85403.1 - 3.8e-16 59.9 0.0 7.1e-16 59.0 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 RKO85403.1 - 1.3e-06 28.5 1.0 0.004 17.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC2_membrane_3 PF12698.7 RKO85403.1 - 1.9e-05 24.0 16.9 2.9e-05 23.4 16.9 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein RsgA_GTPase PF03193.16 RKO85403.1 - 0.00019 21.4 0.4 0.00039 20.4 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase SMC_N PF02463.19 RKO85403.1 - 0.0023 17.4 0.0 0.11 11.9 0.0 2.3 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 RKO85403.1 - 0.0058 16.3 0.3 0.014 15.2 0.3 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 RKO85403.1 - 0.028 14.9 0.3 0.2 12.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 RKO85403.1 - 0.036 13.7 0.6 0.078 12.5 0.3 1.6 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 RKO85403.1 - 0.19 12.0 0.4 1.2 9.4 0.1 2.4 3 0 0 3 3 3 0 AAA domain ABC_ATPase PF09818.9 RKO85403.1 - 0.22 10.3 0.0 0.34 9.6 0.0 1.2 1 0 0 1 1 1 0 Predicted ATPase of the ABC class HMGL-like PF00682.19 RKO85405.1 - 5.8e-73 245.7 0.3 7.7e-73 245.3 0.3 1.2 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 RKO85405.1 - 1.8e-23 82.9 0.0 1.2e-22 80.2 0.0 2.2 1 1 0 1 1 1 1 LeuA allosteric (dimerisation) domain ORC5_C PF14630.6 RKO85407.1 - 4.6e-26 92.0 0.0 5e-26 91.9 0.0 1.0 1 0 0 1 1 1 1 Origin recognition complex (ORC) subunit 5 C-terminus OrfA PF17495.2 RKO85407.1 - 0.15 12.2 0.0 0.18 12.0 0.0 1.1 1 0 0 1 1 1 0 Vpr-like OrfA LRR_9 PF14580.6 RKO85408.1 - 8.3e-13 48.2 0.1 3.1e-12 46.3 0.1 1.8 1 1 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 RKO85408.1 - 1.7e-08 34.6 2.5 0.0017 18.7 0.1 2.7 1 1 0 2 2 2 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO85408.1 - 6.7e-07 29.0 5.6 2.7e-06 27.0 1.8 2.4 2 0 0 2 2 2 1 Leucine rich repeat Fasciclin PF02469.22 RKO85409.1 - 2.1e-05 24.8 0.0 5.2e-05 23.5 0.0 1.6 2 0 0 2 2 2 1 Fasciclin domain Pkinase PF00069.25 RKO85410.1 - 2.5e-56 190.9 1.0 1.9e-55 188.1 1.0 1.9 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO85410.1 - 2.1e-31 109.1 0.0 2.7e-31 108.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO85410.1 - 2.1e-08 33.9 0.0 5.9e-08 32.4 0.0 1.6 1 1 1 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 RKO85410.1 - 2e-06 26.8 0.1 2.7e-06 26.4 0.1 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 RKO85410.1 - 0.012 15.0 0.1 0.017 14.5 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 RKO85410.1 - 0.031 13.2 0.3 0.038 12.9 0.3 1.1 1 0 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 RKO85410.1 - 0.089 12.7 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family adh_short_C2 PF13561.6 RKO85412.1 - 7.2e-38 130.4 0.0 7.9e-38 130.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO85412.1 - 8.6e-21 74.3 0.0 1e-20 74.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase tRNA_int_endo PF01974.17 RKO85413.1 - 1.4e-08 34.6 0.6 3.2e-08 33.5 0.6 1.6 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 RKO85413.1 - 0.014 15.0 0.0 0.039 13.6 0.0 1.7 1 0 0 1 1 1 0 tRNA intron endonuclease, N-terminal domain Thymidylate_kin PF02223.17 RKO85413.1 - 0.11 12.1 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Thymidylate kinase MCC-bdg_PDZ PF10506.9 RKO85414.1 - 0.0016 18.4 0.9 0.0038 17.2 0.9 1.6 1 0 0 1 1 1 1 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF4407 PF14362.6 RKO85414.1 - 0.087 12.2 5.5 0.15 11.3 5.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Lebercilin PF15619.6 RKO85414.1 - 3 7.5 8.6 6.8 6.3 0.2 2.2 2 0 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Spc24 PF08286.11 RKO85414.1 - 6.6 7.0 6.5 17 5.7 1.5 2.3 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 NTP_transf_9 PF04248.12 RKO85415.1 - 1.4e-17 63.4 0.1 2e-17 62.8 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF427) SBF PF01758.16 RKO85416.1 - 4.3e-44 150.5 9.1 4.3e-44 150.5 9.1 2.1 3 0 0 3 3 3 1 Sodium Bile acid symporter family DUF962 PF06127.11 RKO85416.1 - 0.024 14.7 0.0 0.079 13.0 0.0 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF962) HMG-CoA_red PF00368.18 RKO85417.1 - 5.8e-140 466.5 3.6 6.7e-140 466.3 3.6 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase RyR PF02026.16 RKO85418.1 - 0.11 12.7 4.9 79 3.5 0.0 4.7 5 0 0 5 5 5 0 RyR domain Carbpep_Y_N PF05388.11 RKO85418.1 - 0.27 11.8 0.0 1.9e+02 2.6 0.0 3.7 4 0 0 4 4 4 0 Carboxypeptidase Y pro-peptide GDWWSH PF15667.5 RKO85418.1 - 2.8 7.3 4.4 24 4.3 0.1 2.9 2 1 1 3 3 3 0 Protein of unknown function with motif GDWWSH Vinculin PF01044.19 RKO85419.1 - 0.05 11.8 0.0 0.062 11.5 0.0 1.0 1 0 0 1 1 1 0 Vinculin family GDP_Man_Dehyd PF16363.5 RKO85420.1 - 6.9e-151 502.3 0.0 7.7e-151 502.2 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 RKO85420.1 - 3.5e-73 246.0 0.0 4.2e-73 245.8 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 RKO85420.1 - 0.00011 21.5 0.0 0.00015 21.0 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 RKO85420.1 - 0.0026 17.0 0.0 0.0044 16.2 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NmrA PF05368.13 RKO85420.1 - 0.019 14.6 0.0 0.063 12.8 0.0 1.8 2 0 0 2 2 2 0 NmrA-like family NAD_binding_10 PF13460.6 RKO85420.1 - 0.037 13.9 0.0 0.046 13.6 0.0 1.3 1 0 0 1 1 1 0 NAD(P)H-binding GIT_SHD PF08518.11 RKO85421.1 - 1.1e-24 85.8 6.5 5.9e-12 45.0 2.0 2.7 2 0 0 2 2 2 2 Spa2 homology domain (SHD) of GIT GIT1_C PF12205.8 RKO85421.1 - 2.1e-08 34.3 0.1 2.1e-08 34.3 0.1 2.9 3 0 0 3 3 3 1 G protein-coupled receptor kinase-interacting protein 1 C term ATG16 PF08614.11 RKO85421.1 - 0.0012 19.1 3.5 0.0012 19.1 3.5 2.8 3 0 0 3 3 3 1 Autophagy protein 16 (ATG16) Laminin_I PF06008.14 RKO85421.1 - 0.0045 16.7 5.4 0.0045 16.7 5.4 3.6 4 0 0 4 4 4 1 Laminin Domain I CENP-K PF11802.8 RKO85421.1 - 0.062 12.9 3.9 0.97 9.0 1.7 3.2 3 0 0 3 3 3 0 Centromere-associated protein K Rad9 PF04139.13 RKO85421.1 - 0.25 10.8 2.7 0.22 10.9 0.6 1.8 2 0 0 2 2 2 0 Rad9 Mer2 PF09074.10 RKO85421.1 - 0.43 10.4 13.0 2.9 7.7 1.1 3.5 3 1 0 3 3 3 0 Mer2 DUF4763 PF15960.5 RKO85421.1 - 1.8 7.8 7.2 19 4.4 4.5 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4763) DUF1525 PF07511.11 RKO85421.1 - 2.5 8.2 6.0 3.1 8.0 0.5 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF1525) HAUS-augmin3 PF14932.6 RKO85421.1 - 3.9 7.0 11.5 0.36 10.4 4.7 2.6 3 0 0 3 3 3 0 HAUS augmin-like complex subunit 3 MbeD_MobD PF04899.12 RKO85421.1 - 6.2 7.0 7.6 4.7 7.4 0.8 3.2 2 0 0 2 2 2 0 MbeD/MobD like FTCD_C PF04961.12 RKO85421.1 - 7.7 6.2 9.8 0.47 10.2 0.3 3.0 3 0 0 3 3 3 0 Formiminotransferase-cyclodeaminase Sec34 PF04136.15 RKO85421.1 - 8 6.3 13.7 0.68 9.8 2.5 3.3 4 0 0 4 4 4 0 Sec34-like family RHD3 PF05879.12 RKO85422.1 - 6.5e-14 51.0 0.0 1e-13 50.4 0.0 1.2 1 0 0 1 1 1 1 Root hair defective 3 GTP-binding protein (RHD3) CK2S PF15011.6 RKO85422.1 - 0.14 12.1 0.0 0.28 11.1 0.0 1.4 1 0 0 1 1 1 0 Casein Kinase 2 substrate WD40 PF00400.32 RKO85423.1 - 3.1e-25 88.0 15.1 1.6e-06 28.7 0.2 6.5 6 0 0 6 6 6 5 WD domain, G-beta repeat Nup160 PF11715.8 RKO85423.1 - 3.5e-05 22.7 4.6 0.13 10.8 0.1 3.3 1 1 1 3 3 3 3 Nucleoporin Nup120/160 ANAPC4_WD40 PF12894.7 RKO85423.1 - 0.00062 20.0 0.1 5.3 7.4 0.0 4.3 2 2 2 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Pyr_redox_2 PF07992.14 RKO85424.1 - 3.8e-08 32.9 0.0 3e-07 30.0 0.0 2.2 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 RKO85424.1 - 0.00073 19.7 0.0 0.0022 18.2 0.0 1.8 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 RKO85424.1 - 0.016 15.2 0.3 0.082 12.9 0.0 2.3 4 0 0 4 4 4 0 FAD-NAD(P)-binding Thi4 PF01946.17 RKO85424.1 - 0.019 14.2 0.0 0.049 12.9 0.0 1.6 2 0 0 2 2 2 0 Thi4 family FAD_binding_2 PF00890.24 RKO85424.1 - 0.05 12.7 0.0 0.25 10.4 0.0 1.9 2 0 0 2 2 2 0 FAD binding domain K_oxygenase PF13434.6 RKO85424.1 - 0.28 10.3 0.0 1.6 7.8 0.0 1.9 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) DLH PF01738.18 RKO85425.1 - 1.2e-21 77.3 0.0 1.5e-21 77.0 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_1 PF00561.20 RKO85425.1 - 4.6e-05 23.2 0.0 8.2e-05 22.4 0.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 RKO85425.1 - 0.014 14.6 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 BAAT_C PF08840.11 RKO85425.1 - 0.043 13.7 0.0 0.062 13.2 0.0 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal DLH PF01738.18 RKO85426.1 - 2.3e-18 66.6 0.1 2.5e-18 66.4 0.1 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_1 PF00561.20 RKO85426.1 - 0.00094 18.9 0.0 0.0011 18.6 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 RKO85426.1 - 0.097 11.9 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Peptidase_C2 PF00648.21 RKO85427.1 - 0.01 14.9 0.0 0.01 14.9 0.0 1.0 1 0 0 1 1 1 1 Calpain family cysteine protease Peptidase_M20 PF01546.28 RKO85429.1 - 7.4e-25 87.9 0.0 7.5e-25 87.8 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 RKO85429.1 - 4.9e-06 26.4 0.0 9.8e-06 25.4 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain FAD_binding_6 PF00970.24 RKO85434.1 - 1.1e-08 35.3 0.0 1.9e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Cyt-b5 PF00173.28 RKO85434.1 - 1.3e-05 25.2 0.0 2.2e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain NAD_binding_1 PF00175.21 RKO85434.1 - 0.00011 22.8 0.0 0.0002 21.9 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain DUF2345 PF10106.9 RKO85435.1 - 0.84 9.5 14.8 0.37 10.6 0.9 4.3 4 1 0 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2345) ANF_receptor PF01094.28 RKO85436.1 - 3e-32 112.1 1.1 4e-20 72.2 0.3 2.1 2 0 0 2 2 2 2 Receptor family ligand binding region Peripla_BP_6 PF13458.6 RKO85436.1 - 1.7e-08 34.6 5.3 4.2e-08 33.3 1.3 2.5 2 1 0 2 2 2 1 Periplasmic binding protein Abhydrolase_9_N PF15420.6 RKO85436.1 - 0.44 10.5 5.5 1.4 8.8 0.7 2.5 2 0 0 2 2 2 0 Alpha/beta-hydrolase family N-terminus BTB_2 PF02214.22 RKO85437.1 - 1.8e-16 60.3 0.0 3.1e-16 59.5 0.0 1.4 1 0 0 1 1 1 1 BTB/POZ domain Lip_A_acyltrans PF03279.13 RKO85437.1 - 0.12 11.5 0.0 0.18 10.9 0.0 1.3 1 1 0 1 1 1 0 Bacterial lipid A biosynthesis acyltransferase Phage_Nu1 PF07471.12 RKO85437.1 - 0.38 10.5 4.2 0.71 9.6 4.0 1.6 1 1 0 1 1 1 0 Phage DNA packaging protein Nu1 Clr2_transil PF16761.5 RKO85438.1 - 2.1e-17 63.7 0.0 3.9e-17 62.8 0.0 1.4 1 0 0 1 1 1 1 Transcription-silencing protein, cryptic loci regulator Clr2 LRS4 PF10422.9 RKO85438.1 - 2.2 7.8 4.3 3.8 7.0 4.3 1.3 1 0 0 1 1 1 0 Monopolin complex subunit LRS4 Sulfotransfer_4 PF17784.1 RKO85439.1 - 0.058 13.2 0.0 0.078 12.8 0.0 1.2 1 0 0 1 1 1 0 Sulfotransferase domain DZR PF12773.7 RKO85439.1 - 0.16 12.0 3.6 7.9 6.6 0.5 2.5 2 0 0 2 2 2 0 Double zinc ribbon DUF1746 PF08508.10 RKO85440.1 - 0.017 15.4 9.1 0.098 13.0 9.1 2.0 1 1 0 1 1 1 0 Fungal domain of unknown function (DUF1746) 6PGD PF00393.19 RKO85444.1 - 1.7e-72 244.2 0.0 2.2e-72 243.9 0.0 1.1 1 0 0 1 1 1 1 6-phosphogluconate dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 RKO85444.1 - 3.1e-50 170.4 0.0 4.4e-50 169.9 0.0 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 RKO85444.1 - 0.0016 19.0 0.0 0.0038 17.8 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_11 PF14833.6 RKO85444.1 - 0.039 14.2 0.0 0.077 13.2 0.0 1.5 1 0 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MscL PF01741.18 RKO85446.1 - 4.3e-25 88.4 0.0 5.5e-25 88.0 0.0 1.1 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL DZR PF12773.7 RKO85446.1 - 0.0071 16.3 3.0 0.014 15.4 3.0 1.4 1 0 0 1 1 1 1 Double zinc ribbon Pkinase PF00069.25 RKO85448.1 - 3e-68 230.0 0.0 3.4e-68 229.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO85448.1 - 7.2e-34 117.2 0.0 8.4e-34 117.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO85448.1 - 5.6e-11 42.3 0.0 6.3e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 RKO85448.1 - 6.9e-05 22.9 0.2 0.00035 20.6 0.1 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 RKO85448.1 - 0.0003 20.2 0.0 0.00043 19.7 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 RKO85448.1 - 0.00084 19.0 0.1 0.0044 16.6 0.0 1.8 1 1 1 2 2 2 1 Choline/ethanolamine kinase Haspin_kinase PF12330.8 RKO85448.1 - 0.0014 17.6 0.0 0.0016 17.4 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 RKO85448.1 - 0.0045 16.6 0.0 0.0077 15.9 0.0 1.4 1 0 0 1 1 1 1 RIO1 family YukC PF10140.9 RKO85448.1 - 0.0046 15.8 0.0 0.0065 15.3 0.0 1.2 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukC Seadorna_VP7 PF07387.11 RKO85448.1 - 0.0076 15.3 0.0 0.01 14.9 0.0 1.1 1 0 0 1 1 1 1 Seadornavirus VP7 TetR_C_25 PF17933.1 RKO85448.1 - 0.042 14.2 0.0 0.11 12.9 0.0 1.6 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain FTA2 PF13095.6 RKO85448.1 - 0.067 12.8 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Motile_Sperm PF00635.26 RKO85449.1 - 1.9e-23 82.4 0.0 2.3e-23 82.1 0.0 1.1 1 0 0 1 1 1 1 MSP (Major sperm protein) domain ASH PF15780.5 RKO85449.1 - 0.0038 17.4 0.0 0.0049 17.1 0.0 1.2 1 0 0 1 1 1 1 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin F-box PF00646.33 RKO85451.1 - 3.6e-06 26.7 1.1 5.4e-05 22.9 0.1 2.8 2 1 1 3 3 3 1 F-box domain F-box-like PF12937.7 RKO85451.1 - 8.1e-05 22.4 0.3 0.00017 21.4 0.3 1.5 1 0 0 1 1 1 1 F-box-like Focadhesin PF11229.8 RKO85452.1 - 0.052 11.8 0.0 0.062 11.5 0.0 1.1 1 0 0 1 1 1 0 Focadhesin Mur_ligase_M PF08245.12 RKO85453.1 - 0.055 13.5 0.0 0.086 12.8 0.0 1.3 1 0 0 1 1 1 0 Mur ligase middle domain PBP PF01161.20 RKO85456.1 - 3.8e-10 40.2 0.1 7.9e-10 39.2 0.1 1.5 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Proteasome PF00227.26 RKO85456.1 - 1.6e-06 27.7 0.0 2.9e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 Proteasome subunit FtsQ PF03799.15 RKO85456.1 - 0.1 13.4 0.1 2.9 8.7 0.0 2.5 2 0 0 2 2 2 0 Cell division protein FtsQ Nop14 PF04147.12 RKO85457.1 - 5.2e-56 190.4 9.9 6.4e-56 190.1 9.9 1.1 1 0 0 1 1 1 1 Nop14-like family MFS_1 PF07690.16 RKO85458.1 - 5.4e-45 153.9 23.9 8.4e-45 153.2 23.9 1.3 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO85458.1 - 9e-11 41.3 10.3 9e-11 41.3 10.3 2.6 2 1 1 3 3 3 2 Sugar (and other) transporter MFS_3 PF05977.13 RKO85458.1 - 0.0018 16.7 4.9 0.0032 15.9 4.9 1.4 1 0 0 1 1 1 1 Transmembrane secretion effector Gly-zipper_Omp PF13488.6 RKO85458.1 - 0.059 13.4 4.7 3.6 7.7 1.1 2.5 2 0 0 2 2 2 0 Glycine zipper OATP PF03137.20 RKO85458.1 - 0.17 10.1 15.5 0.47 8.7 6.9 3.2 1 1 1 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family MFS_1_like PF12832.7 RKO85458.1 - 0.52 9.1 20.5 0.014 14.3 6.9 3.1 3 0 0 3 3 3 0 MFS_1 like family Tyrosinase PF00264.20 RKO85460.1 - 5.8e-09 36.6 0.0 6.4e-09 36.4 0.0 1.1 1 0 0 1 1 1 1 Common central domain of tyrosinase RRM_1 PF00076.22 RKO85461.1 - 1.7e-05 24.6 0.0 7.6e-05 22.5 0.0 2.0 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-RanBP PF00641.18 RKO85461.1 - 0.018 14.4 1.7 0.097 12.0 0.1 2.2 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others RTX PF02382.15 RKO85461.1 - 0.019 14.7 11.0 0.03 14.0 11.0 1.3 1 0 0 1 1 1 0 N-terminal domain in RTX protein PWWP PF00855.17 RKO85462.1 - 0.082 13.3 0.0 0.23 11.9 0.0 1.8 1 0 0 1 1 1 0 PWWP domain RRM_1 PF00076.22 RKO85463.1 - 1.3e-16 60.1 0.1 3e-16 59.0 0.1 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 RKO85463.1 - 0.0016 18.4 0.1 0.0029 17.6 0.1 1.4 1 0 0 1 1 1 1 RNA binding motif RL PF17797.1 RKO85463.1 - 0.026 14.4 0.0 0.042 13.8 0.0 1.4 1 0 0 1 1 1 0 RL domain Nup35_RRM_2 PF14605.6 RKO85463.1 - 0.04 13.9 0.1 0.073 13.1 0.1 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif I_LWEQ PF01608.17 RKO85464.1 - 1.5e-46 158.4 7.6 1.5e-46 158.4 7.6 1.9 2 0 0 2 2 2 1 I/LWEQ domain Talin_middle PF09141.10 RKO85464.1 - 0.013 15.6 0.4 0.013 15.6 0.4 3.2 2 2 1 3 3 3 0 Talin, middle domain RbcS PF12338.8 RKO85464.1 - 1.1 9.6 6.4 0.12 12.6 0.9 2.2 2 0 0 2 2 2 0 Ribulose-1,5-bisphosphate carboxylase small subunit DUF948 PF06103.11 RKO85464.1 - 5.8 7.3 13.5 2.7 8.3 0.6 2.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) SNF2_N PF00176.23 RKO85465.1 - 9.9e-75 251.4 0.1 1.6e-74 250.8 0.1 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 RKO85465.1 - 6.2e-15 55.5 0.0 4.7e-14 52.7 0.0 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO85465.1 - 2.8e-10 40.5 0.0 5.1e-10 39.6 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 RKO85465.1 - 0.00041 20.1 0.0 0.00076 19.3 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase HDA2-3 PF11496.8 RKO85465.1 - 0.00084 18.6 0.0 0.0016 17.7 0.0 1.4 1 0 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 SWI2_SNF2 PF18766.1 RKO85465.1 - 0.0015 18.3 0.0 0.004 16.8 0.0 1.8 1 1 0 1 1 1 1 SWI2/SNF2 ATPase DEAD_2 PF06733.15 RKO85465.1 - 0.022 14.4 0.3 0.045 13.4 0.3 1.4 1 0 0 1 1 1 0 DEAD_2 ERCC3_RAD25_C PF16203.5 RKO85465.1 - 0.092 11.9 0.0 0.16 11.2 0.0 1.3 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase AAA_22 PF13401.6 RKO85465.1 - 0.14 12.5 0.0 0.53 10.6 0.0 2.0 1 0 0 1 1 1 0 AAA domain Phage_P2_GpU PF06995.11 RKO85467.1 - 0.21 11.2 0.0 0.35 10.5 0.0 1.3 1 0 0 1 1 1 0 Phage P2 GpU MGTL PF17059.5 RKO85469.1 - 0.2 11.5 16.9 1.4 8.8 0.9 4.4 4 0 0 4 4 4 0 MgtA leader peptide EF_TS PF00889.19 RKO85470.1 - 8.1e-25 87.7 0.0 4.5e-21 75.4 0.0 2.1 1 1 1 2 2 2 2 Elongation factor TS TIP41 PF04176.13 RKO85472.1 - 1.2e-64 216.9 0.0 1.4e-64 216.7 0.0 1.0 1 0 0 1 1 1 1 TIP41-like family 2-Hacid_dh PF00389.30 RKO85472.1 - 0.17 11.5 0.0 0.21 11.2 0.0 1.1 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Ribosomal_L2 PF00181.23 RKO85473.1 - 0.038 13.9 0.0 4.4 7.3 0.0 2.2 1 1 1 2 2 2 0 Ribosomal Proteins L2, RNA binding domain Myb_DNA-bind_4 PF13837.6 RKO85473.1 - 0.12 12.8 0.1 0.21 12.0 0.1 1.4 1 1 0 1 1 1 0 Myb/SANT-like DNA-binding domain Glutaminase PF04960.15 RKO85473.1 - 0.18 10.9 0.6 0.79 8.8 0.1 1.9 1 1 1 2 2 2 0 Glutaminase Pkinase_Tyr PF07714.17 RKO85474.1 - 2.1e-27 96.1 0.0 1.2e-22 80.4 0.0 2.6 2 1 0 2 2 2 2 Protein tyrosine kinase Pkinase PF00069.25 RKO85474.1 - 2.8e-16 59.7 0.0 1.2e-15 57.6 0.0 1.8 2 0 0 2 2 2 1 Protein kinase domain Kinase-like PF14531.6 RKO85474.1 - 0.0089 15.4 0.0 0.014 14.7 0.0 1.3 1 0 0 1 1 1 1 Kinase-like MPP6 PF10175.9 RKO85474.1 - 0.076 13.5 0.2 0.22 12.0 0.2 1.7 1 0 0 1 1 1 0 M-phase phosphoprotein 6 Ribosomal_60s PF00428.19 RKO85474.1 - 0.18 12.4 2.7 0.38 11.4 2.7 1.6 1 0 0 1 1 1 0 60s Acidic ribosomal protein UFD1 PF03152.14 RKO85475.1 - 9.6e-37 126.1 0.0 1.1e-36 125.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin fusion degradation protein UFD1 EFP_N PF08207.12 RKO85475.1 - 0.044 13.8 0.0 0.083 12.9 0.0 1.4 1 0 0 1 1 1 0 Elongation factor P (EF-P) KOW-like domain PTCB-BRCT PF12738.7 RKO85477.1 - 9.5e-29 99.1 0.9 1.9e-13 50.2 0.1 3.3 3 0 0 3 3 3 3 twin BRCT domain BRCT PF00533.26 RKO85477.1 - 1.4e-16 60.6 0.0 7.7e-05 23.0 0.0 3.4 3 0 0 3 3 3 3 BRCA1 C Terminus (BRCT) domain BRCT_2 PF16589.5 RKO85477.1 - 1e-06 29.0 0.0 1.3 9.5 0.0 3.9 4 0 0 4 4 4 3 BRCT domain, a BRCA1 C-terminus domain LIG3_BRCT PF16759.5 RKO85477.1 - 0.0027 18.0 0.0 0.03 14.6 0.0 2.6 3 0 0 3 3 3 1 DNA ligase 3 BRCT domain RTT107_BRCT_5 PF16770.5 RKO85477.1 - 0.12 12.3 0.0 31 4.5 0.0 3.3 4 0 0 4 4 4 0 Regulator of Ty1 transposition protein 107 BRCT domain His_biosynth PF00977.21 RKO85478.1 - 1.2e-45 155.8 0.0 3.4e-29 101.9 0.0 2.3 2 1 0 2 2 2 2 Histidine biosynthesis protein NMO PF03060.15 RKO85478.1 - 0.067 12.6 0.7 0.13 11.6 0.7 1.4 1 0 0 1 1 1 0 Nitronate monooxygenase DUF1403 PF07183.11 RKO85478.1 - 0.087 12.4 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1403) GATase PF00117.28 RKO85479.1 - 4.8e-05 23.2 0.0 5.1e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 RKO85479.1 - 0.00042 20.0 0.0 0.00045 19.9 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.13 RKO85479.1 - 0.12 12.1 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Peptidase C26 Vps36_ESCRT-II PF11605.8 RKO85481.1 - 0.0045 17.1 0.0 0.01 16.0 0.0 1.5 1 1 0 1 1 1 1 Vacuolar protein sorting protein 36 Vps36 CBP4 PF07960.11 RKO85482.1 - 1.4e-06 28.2 0.0 0.00064 19.6 0.0 2.2 2 0 0 2 2 2 2 CBP4 YlaH PF14036.6 RKO85482.1 - 0.098 13.0 0.0 0.15 12.4 0.0 1.3 1 0 0 1 1 1 0 YlaH-like protein DUF4574 PF15141.6 RKO85482.1 - 0.1 12.5 0.0 0.28 11.1 0.0 1.7 2 0 0 2 2 2 0 Ubiquinol-cytochrome-c reductase complex assembly factor 3 Tim44 PF04280.15 RKO85483.1 - 4.9e-07 30.0 0.0 5.5e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 Tim44-like domain RSN1_7TM PF02714.15 RKO85484.1 - 1.1e-48 166.0 28.7 9.6e-42 143.2 18.3 2.6 3 0 0 3 3 3 2 Calcium-dependent channel, 7TM region, putative phosphate VPS9 PF02204.18 RKO85486.1 - 6.4e-25 87.4 0.0 9e-25 86.9 0.0 1.2 1 0 0 1 1 1 1 Vacuolar sorting protein 9 (VPS9) domain PCM1_C PF15717.5 RKO85486.1 - 0.78 8.4 3.4 2.8 6.5 0.2 2.1 1 1 1 2 2 2 0 Pericentriolar material 1 C terminus Peptidase_C48 PF02902.19 RKO85487.1 - 4.7e-08 33.2 0.4 5.2e-08 33.0 0.4 1.0 1 0 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain EF-hand_1 PF00036.32 RKO85489.1 - 6.3e-19 66.0 2.1 0.0001 21.6 0.1 4.4 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 RKO85489.1 - 1.6e-18 66.9 0.2 3e-09 37.2 0.2 2.5 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 RKO85489.1 - 1.4e-17 62.0 2.6 9.7e-05 22.0 0.1 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 RKO85489.1 - 7.2e-08 31.6 1.9 0.0049 16.3 0.0 3.9 4 0 0 4 4 4 2 EF hand EF-hand_8 PF13833.6 RKO85489.1 - 1.5e-06 28.0 2.9 0.29 11.0 0.1 4.4 4 2 0 4 4 4 3 EF-hand domain pair EF-hand_9 PF14658.6 RKO85489.1 - 1.7e-05 25.0 0.1 0.017 15.4 0.0 3.1 2 1 1 3 3 3 1 EF-hand domain EF-hand_4 PF12763.7 RKO85489.1 - 0.0021 18.0 1.0 1.6 8.8 0.1 3.2 1 1 2 3 3 3 1 Cytoskeletal-regulatory complex EF hand Dockerin_1 PF00404.18 RKO85489.1 - 0.0026 17.9 3.9 0.004 17.3 2.7 1.8 2 1 0 2 2 2 1 Dockerin type I domain SPARC_Ca_bdg PF10591.9 RKO85489.1 - 0.006 16.9 0.0 1.3 9.4 0.0 2.4 2 1 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region Ras PF00071.22 RKO85494.1 - 8.3e-11 41.7 0.0 8.7e-11 41.7 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO85494.1 - 0.0017 18.6 0.0 0.0017 18.6 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Zds_C PF08632.10 RKO85495.1 - 2.5e-10 39.9 0.3 3.9e-10 39.3 0.3 1.3 1 0 0 1 1 1 1 Activator of mitotic machinery Cdc14 phosphatase activation C-term Tup_N PF08581.10 RKO85497.1 - 0.0036 17.6 2.4 8.3 6.8 0.3 3.8 2 1 2 4 4 4 2 Tup N-terminal CCDC144C PF14915.6 RKO85497.1 - 0.052 12.7 0.8 0.1 11.7 0.8 1.4 1 0 0 1 1 1 0 CCDC144C protein coiled-coil region zf-His_Me_endon PF05551.11 RKO85497.1 - 0.078 13.2 0.0 0.19 11.9 0.0 1.6 1 0 0 1 1 1 0 Zinc-binding loop region of homing endonuclease GAS PF13851.6 RKO85497.1 - 0.51 9.7 5.5 2 7.8 0.1 2.2 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding Actin PF00022.19 RKO85498.1 - 1e-117 393.2 0.0 4.1e-117 391.2 0.0 1.7 1 1 0 1 1 1 1 Actin GerD PF17898.1 RKO85498.1 - 0.12 12.4 0.0 0.27 11.2 0.0 1.6 1 0 0 1 1 1 0 Spore germination GerD central core domain Arm PF00514.23 RKO85499.1 - 9.9e-89 289.0 19.0 7.5e-12 44.9 0.0 8.3 8 0 0 8 8 8 8 Armadillo/beta-catenin-like repeat IBB PF01749.20 RKO85499.1 - 7.7e-26 90.4 1.5 5.7e-25 87.6 1.6 2.2 2 0 0 2 2 2 1 Importin beta binding domain Arm_3 PF16186.5 RKO85499.1 - 1.1e-23 82.5 3.9 2.7e-23 81.3 3.9 1.6 1 0 0 1 1 1 1 Atypical Arm repeat HEAT_EZ PF13513.6 RKO85499.1 - 5e-20 71.6 2.1 6.8e-08 32.8 0.1 5.7 4 2 2 6 6 6 4 HEAT-like repeat HEAT_2 PF13646.6 RKO85499.1 - 9.2e-15 54.8 0.1 1.6e-06 28.4 0.0 5.1 1 1 6 7 7 7 6 HEAT repeats HEAT PF02985.22 RKO85499.1 - 4.3e-13 48.3 1.0 0.00046 20.2 0.0 7.0 8 0 0 8 8 8 2 HEAT repeat Arm_2 PF04826.13 RKO85499.1 - 1.3e-07 31.4 0.1 0.015 14.8 0.0 3.8 2 1 2 4 4 4 2 Armadillo-like V-ATPase_H_C PF11698.8 RKO85499.1 - 6.5e-06 26.2 0.0 0.81 9.8 0.0 3.9 4 1 1 5 5 5 2 V-ATPase subunit H Adaptin_N PF01602.20 RKO85499.1 - 0.00031 19.4 0.0 0.00082 18.1 0.0 1.7 2 0 0 2 2 2 1 Adaptin N terminal region Atx10homo_assoc PF09759.9 RKO85499.1 - 0.00075 19.5 0.1 0.85 9.7 0.0 3.9 3 0 0 3 3 3 1 Spinocerebellar ataxia type 10 protein domain HEAT_PBS PF03130.16 RKO85499.1 - 0.0039 17.7 0.3 9 7.3 0.0 4.1 4 0 0 4 4 4 1 PBS lyase HEAT-like repeat RICTOR_V PF14668.6 RKO85499.1 - 0.0061 16.8 4.0 0.13 12.5 0.1 4.2 5 1 0 5 5 5 1 Rapamycin-insensitive companion of mTOR, domain 5 Filament PF00038.21 RKO85500.1 - 0.00042 20.0 0.3 0.00074 19.2 0.3 1.3 1 0 0 1 1 1 1 Intermediate filament protein FCH PF00611.23 RKO85500.1 - 0.0046 17.2 0.6 0.036 14.4 0.6 2.2 1 1 0 1 1 1 1 Fes/CIP4, and EFC/F-BAR homology domain DEP PF00610.21 RKO85500.1 - 0.0096 16.0 0.0 0.019 15.0 0.0 1.5 1 0 0 1 1 1 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) zf-met PF12874.7 RKO85501.1 - 1e-06 28.9 1.4 1.5e-06 28.3 1.4 1.3 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 RKO85501.1 - 3.4e-06 27.2 1.3 5e-06 26.6 1.3 1.3 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-U1 PF06220.12 RKO85501.1 - 0.00023 20.9 0.5 0.0004 20.1 0.5 1.4 1 0 0 1 1 1 1 U1 zinc finger SURF2 PF05477.11 RKO85501.1 - 0.0068 16.1 0.4 0.0068 16.1 0.4 2.0 1 1 1 2 2 2 1 Surfeit locus protein 2 (SURF2) zf-C2H2 PF00096.26 RKO85501.1 - 0.15 12.6 0.7 0.33 11.5 0.6 1.7 1 1 0 1 1 1 0 Zinc finger, C2H2 type ADH_N PF08240.12 RKO85502.1 - 1.2e-09 38.0 0.0 2e-09 37.3 0.0 1.4 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain Fungus-induced PF10917.8 RKO85503.1 - 0.1 12.9 0.0 1.4 9.3 0.0 2.5 2 0 0 2 2 2 0 Fungus-induced protein RCC1 PF00415.18 RKO85505.1 - 3.9e-20 72.2 9.9 2.5e-08 34.4 0.0 5.6 6 1 0 6 6 6 3 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 RKO85505.1 - 4.3e-10 39.1 22.2 0.0001 22.0 2.7 6.0 7 0 0 7 7 7 2 Regulator of chromosome condensation (RCC1) repeat SUIM_assoc PF16619.5 RKO85507.1 - 0.0075 16.3 0.0 0.016 15.2 0.0 1.5 1 1 0 1 1 1 1 Unstructured region C-term to UIM in Ataxin3 Sigma70_r1_2 PF00140.20 RKO85508.1 - 0.014 15.4 0.0 0.026 14.5 0.0 1.4 1 0 0 1 1 1 0 Sigma-70 factor, region 1.2 DUF846 PF05832.12 RKO85509.1 - 2.5e-44 150.7 9.7 2.7e-44 150.6 9.7 1.0 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) CysG_dimeriser PF10414.9 RKO85511.1 - 0.051 13.3 1.2 5.4 6.8 0.1 2.4 2 0 0 2 2 2 0 Sirohaem synthase dimerisation region Ion_trans PF00520.31 RKO85513.1 - 7.1e-27 94.2 21.8 9.3e-27 93.8 21.8 1.1 1 0 0 1 1 1 1 Ion transport protein DUF4834 PF16118.5 RKO85513.1 - 6.2 7.8 7.6 5.5 8.0 0.6 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4834) DUF92 PF01940.16 RKO85514.1 - 5.6e-80 268.1 0.7 6.7e-80 267.9 0.7 1.0 1 0 0 1 1 1 1 Integral membrane protein DUF92 PMT_2 PF13231.6 RKO85514.1 - 0.0046 17.2 2.3 0.0063 16.7 0.4 2.1 2 0 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Helicase_C PF00271.31 RKO85515.1 - 5.6e-12 46.0 0.0 1.7e-11 44.5 0.0 1.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DUF4470 PF14737.6 RKO85515.1 - 3.9e-09 36.6 0.1 8e-09 35.6 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4470) IFT43 PF15305.6 RKO85515.1 - 0.12 12.6 2.7 0.3 11.3 2.7 1.6 1 0 0 1 1 1 0 Intraflagellar transport protein 43 Wzz PF02706.15 RKO85518.1 - 0.22 11.9 0.3 5.8 7.3 0.0 2.2 2 0 0 2 2 2 0 Chain length determinant protein Glyco_hydro_16 PF00722.21 RKO85519.1 - 1.2e-16 60.7 0.5 6.6e-16 58.3 0.5 2.2 1 1 0 1 1 1 1 Glycosyl hydrolases family 16 PSP1 PF04468.12 RKO85520.1 - 2.2e-33 114.3 0.6 3.3e-33 113.8 0.6 1.3 1 0 0 1 1 1 1 PSP1 C-terminal conserved region Ank_3 PF13606.6 RKO85521.1 - 4.7e-11 41.9 1.2 0.014 15.9 0.0 4.8 4 1 0 4 4 4 4 Ankyrin repeat Ank_2 PF12796.7 RKO85521.1 - 1.7e-10 41.3 0.0 0.00015 22.3 0.1 2.8 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO85521.1 - 3.6e-10 40.2 0.2 0.0031 18.1 0.0 3.6 2 1 2 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 RKO85521.1 - 8.4e-08 32.3 0.3 0.013 15.9 0.0 4.3 4 0 0 4 4 4 1 Ankyrin repeat Ank_5 PF13857.6 RKO85521.1 - 0.0001 22.5 1.8 0.022 15.1 0.0 3.5 4 0 0 4 4 4 1 Ankyrin repeats (many copies) HAUS6_N PF14661.6 RKO85522.1 - 1.4e-29 103.4 0.1 2e-29 102.8 0.1 1.3 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 6 N-terminus Peptidase_S10 PF00450.22 RKO85523.1 - 1.8e-07 31.0 0.0 2.2e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase AAA_assoc_2 PF16193.5 RKO85525.1 - 0.11 12.9 0.5 0.25 11.7 0.1 1.9 2 0 0 2 2 2 0 AAA C-terminal domain APG6_N PF17675.1 RKO85525.1 - 5.3 7.6 7.4 3.8 8.0 0.2 2.7 3 0 0 3 3 3 0 Apg6 coiled-coil region GPP34 PF05719.11 RKO85526.1 - 8.3e-61 205.6 1.5 1.1e-60 205.2 1.5 1.1 1 0 0 1 1 1 1 Golgi phosphoprotein 3 (GPP34) ALMT PF11744.8 RKO85527.1 - 0.00068 18.6 0.0 0.0012 17.8 0.0 1.3 1 0 0 1 1 1 1 Aluminium activated malate transporter ArAE_2_N PF10337.9 RKO85527.1 - 0.0014 17.8 0.1 0.0014 17.8 0.1 2.5 3 0 0 3 3 3 1 Putative ER transporter, 6TM, N-terminal FUSC_2 PF13515.6 RKO85527.1 - 0.014 15.5 7.7 0.032 14.4 7.7 1.5 1 0 0 1 1 1 0 Fusaric acid resistance protein-like LapA_dom PF06305.11 RKO85527.1 - 0.038 13.8 6.6 2.3 8.1 3.4 2.6 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain ThiF PF00899.21 RKO85527.1 - 0.13 11.6 0.0 0.19 11.0 0.0 1.2 1 0 0 1 1 1 0 ThiF family FAD_binding_6 PF00970.24 RKO85528.1 - 3.1e-33 114.1 0.0 5.1e-33 113.4 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 RKO85528.1 - 1.8e-31 109.0 0.0 2.7e-31 108.4 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 RKO85528.1 - 1e-08 35.5 0.1 7.2e-07 29.5 0.0 2.2 2 0 0 2 2 2 1 Ferric reductase NAD binding domain FAD_binding_9 PF08021.11 RKO85528.1 - 0.17 12.1 0.0 0.33 11.2 0.0 1.5 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain F-box-like PF12937.7 RKO85529.1 - 1.1e-05 25.2 0.1 5.8e-05 22.9 0.1 2.2 1 1 0 1 1 1 1 F-box-like F-box PF00646.33 RKO85529.1 - 0.47 10.4 9.1 3.8 7.5 3.6 3.7 3 1 0 3 3 3 0 F-box domain DEAD PF00270.29 RKO85533.1 - 1.3e-15 57.6 0.0 1.7e-15 57.2 0.0 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 RKO85533.1 - 4.3e-06 26.8 0.0 5.1e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit p450 PF00067.22 RKO85534.1 - 1.3e-43 149.5 0.0 7.2e-38 130.5 0.0 3.3 2 2 0 2 2 2 2 Cytochrome P450 Glyco_hydro_35 PF01301.19 RKO85538.1 - 7.4e-90 301.8 2.9 9.2e-90 301.5 2.9 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 35 BetaGal_dom2 PF10435.9 RKO85538.1 - 4.3e-17 62.5 0.0 6.7e-17 61.9 0.0 1.3 1 0 0 1 1 1 1 Beta-galactosidase, domain 2 Glyco_hydro_42 PF02449.15 RKO85538.1 - 1e-09 38.3 0.3 2e-08 34.0 0.1 2.6 1 1 1 2 2 2 1 Beta-galactosidase BetaGal_dom4_5 PF13364.6 RKO85539.1 - 4.1e-24 85.3 0.0 4.8e-24 85.1 0.0 1.1 1 0 0 1 1 1 1 Beta-galactosidase jelly roll domain Pik1 PF11522.8 RKO85541.1 - 0.00011 22.1 0.7 0.00011 22.1 0.7 2.7 2 1 0 2 2 2 1 Yeast phosphatidylinositol-4-OH kinase Pik1 DUF3759 PF12585.8 RKO85543.1 - 2e-34 117.5 12.1 2.2e-34 117.3 12.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3759) DUF2057 PF09829.9 RKO85543.1 - 0.064 13.4 0.8 0.075 13.2 0.8 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2057) TMEM171 PF15471.6 RKO85545.1 - 0.13 11.2 0.0 0.18 10.7 0.0 1.2 1 0 0 1 1 1 0 Transmembrane protein family 171 NTP_transf_2 PF01909.23 RKO85546.1 - 1.4e-06 28.5 0.0 2.5e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 RKO85546.1 - 0.029 14.4 0.0 0.068 13.3 0.0 1.7 1 1 1 2 2 2 0 Polymerase beta, Nucleotidyltransferase HJURP_C PF12347.8 RKO85546.1 - 0.17 11.9 0.5 22 5.2 0.2 2.4 2 0 0 2 2 2 0 Holliday junction regulator protein family C-terminal repeat Cytochrom_B558a PF05038.13 RKO85547.1 - 6.9e-16 58.3 2.5 4.9e-10 39.3 0.1 2.0 1 1 1 2 2 2 2 Cytochrome Cytochrome b558 alpha-subunit PGPGW PF09656.10 RKO85547.1 - 0.0032 16.9 2.1 0.0064 16.0 2.1 1.4 1 0 0 1 1 1 1 Putative transmembrane protein (PGPGW) HRG PF16954.5 RKO85547.1 - 0.24 11.8 5.5 3 8.3 0.7 2.6 2 1 0 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene Kinesin PF00225.23 RKO85549.1 - 3.7e-105 351.5 0.0 4.2e-105 351.4 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO85549.1 - 5.9e-22 78.2 0.0 1e-21 77.5 0.0 1.4 1 0 0 1 1 1 1 Microtubule binding bZIP_1 PF00170.21 RKO85552.1 - 4.1e-06 26.8 4.9 4.1e-06 26.8 4.9 2.0 2 0 0 2 2 2 1 bZIP transcription factor bZIP_Maf PF03131.17 RKO85552.1 - 0.26 11.8 6.1 1.1 9.8 3.4 2.3 2 0 0 2 2 2 0 bZIP Maf transcription factor ERM PF00769.19 RKO85552.1 - 0.88 9.3 13.8 1.4 8.7 13.8 1.2 1 0 0 1 1 1 0 Ezrin/radixin/moesin family UCH PF00443.29 RKO85553.1 - 2.5e-32 112.4 0.5 2.8e-32 112.2 0.5 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 RKO85553.1 - 1.5e-16 60.9 0.3 2.1e-16 60.4 0.3 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-HIT PF04438.16 RKO85553.1 - 1.4 8.9 5.2 2 8.4 0.7 2.3 2 0 0 2 2 2 0 HIT zinc finger BATS PF06968.13 RKO85554.1 - 4.5e-19 68.4 0.2 1.2e-18 67.0 0.1 1.8 2 0 0 2 2 2 1 Biotin and Thiamin Synthesis associated domain Radical_SAM PF04055.21 RKO85554.1 - 3.1e-12 47.2 0.0 6.4e-12 46.2 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily ABC_tran PF00005.27 RKO85556.1 - 2.5e-31 109.0 0.0 4.2e-31 108.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 RKO85556.1 - 1.8e-08 34.1 0.2 0.00094 18.7 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 RKO85556.1 - 0.00045 20.1 0.0 0.012 15.5 0.0 2.1 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 RKO85556.1 - 0.0012 19.0 0.1 0.0029 17.7 0.1 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_29 PF13555.6 RKO85556.1 - 0.0023 17.6 0.1 0.0044 16.7 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 RKO85556.1 - 0.0068 16.5 0.1 0.012 15.7 0.1 1.4 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_16 PF13191.6 RKO85556.1 - 0.012 16.0 0.1 0.025 15.0 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 RKO85556.1 - 0.017 15.4 0.1 0.053 13.8 0.1 1.9 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 RKO85556.1 - 0.027 13.5 0.0 0.055 12.5 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_30 PF13604.6 RKO85556.1 - 0.059 13.1 0.3 0.14 11.9 0.3 1.7 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 RKO85556.1 - 0.066 12.7 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region TrwB_AAD_bind PF10412.9 RKO85556.1 - 0.075 11.9 0.0 0.13 11.1 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_5 PF07728.14 RKO85556.1 - 0.087 12.8 0.1 10 6.1 0.0 2.8 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 RKO85556.1 - 0.11 11.7 0.4 0.37 9.9 0.1 1.8 2 0 0 2 2 2 0 NB-ARC domain AAA_23 PF13476.6 RKO85556.1 - 0.13 12.7 0.0 0.22 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_15 PF13175.6 RKO85556.1 - 0.14 11.8 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain Dynamin_N PF00350.23 RKO85556.1 - 0.15 12.1 0.1 0.25 11.4 0.1 1.3 1 0 0 1 1 1 0 Dynamin family DEAD PF00270.29 RKO85556.1 - 0.22 11.3 0.6 2.6 7.8 0.6 2.1 1 1 0 1 1 1 0 DEAD/DEAH box helicase AAA_18 PF13238.6 RKO85557.1 - 1.8e-09 38.2 0.0 8.9e-09 36.0 0.0 1.9 1 1 0 1 1 1 1 AAA domain PRK PF00485.18 RKO85557.1 - 4.7e-07 29.7 0.0 6.4e-07 29.3 0.0 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_33 PF13671.6 RKO85557.1 - 6.1e-05 23.2 0.0 0.0048 17.0 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.6 RKO85557.1 - 0.00023 21.6 0.0 0.019 15.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 RKO85557.1 - 0.0033 16.7 0.0 0.051 12.9 0.0 2.1 2 0 0 2 2 2 1 Zeta toxin DnaB_C PF03796.15 RKO85557.1 - 0.0078 15.6 0.0 0.011 15.1 0.0 1.1 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain NACHT PF05729.12 RKO85557.1 - 0.0085 16.0 0.0 0.014 15.3 0.0 1.4 1 0 0 1 1 1 1 NACHT domain MeaB PF03308.16 RKO85557.1 - 0.0086 15.1 0.0 0.012 14.7 0.0 1.1 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Thymidylate_kin PF02223.17 RKO85557.1 - 0.012 15.3 0.0 3.1 7.4 0.0 2.1 2 0 0 2 2 2 0 Thymidylate kinase KTI12 PF08433.10 RKO85557.1 - 0.017 14.6 0.0 0.021 14.3 0.0 1.1 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_16 PF13191.6 RKO85557.1 - 0.023 15.1 0.0 0.026 14.9 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain KAP_NTPase PF07693.14 RKO85557.1 - 0.025 13.8 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain DUF87 PF01935.17 RKO85557.1 - 0.042 13.9 0.1 0.066 13.3 0.1 1.2 1 0 0 1 1 1 0 Helicase HerA, central domain DUF2075 PF09848.9 RKO85557.1 - 0.043 13.1 0.0 0.052 12.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_25 PF13481.6 RKO85557.1 - 0.045 13.3 0.0 0.077 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 RKO85557.1 - 0.061 13.6 0.0 0.092 13.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 RKO85557.1 - 0.094 11.9 0.1 0.22 10.7 0.0 1.6 2 0 0 2 2 2 0 NB-ARC domain T2SSE PF00437.20 RKO85557.1 - 0.096 11.7 0.0 0.14 11.2 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein SRP54 PF00448.22 RKO85557.1 - 0.1 12.2 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA PF00004.29 RKO85557.1 - 0.11 12.9 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 RKO85557.1 - 0.14 11.9 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 RKO85557.1 - 0.17 10.8 0.0 0.21 10.4 0.0 1.1 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Viral_helicase1 PF01443.18 RKO85557.1 - 0.19 11.5 0.0 0.23 11.2 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_24 PF13479.6 RKO85557.1 - 0.25 11.0 0.0 0.36 10.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 RKO85557.1 - 0.25 11.7 0.0 0.4 11.1 0.0 1.3 1 0 0 1 1 1 0 RNA helicase Rota_NSP4 PF01452.16 RKO85558.1 - 0.11 12.2 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Rotavirus non structural protein BCS1_N PF08740.11 RKO85560.1 - 3.5e-40 138.0 0.1 4.5e-40 137.6 0.1 1.1 1 0 0 1 1 1 1 BCS1 N terminal Nop25 PF09805.9 RKO85562.1 - 3.6e-14 53.4 26.8 5.8e-13 49.5 26.8 2.9 1 1 0 1 1 1 1 Nucleolar protein 12 (25kDa) ROF PF07073.12 RKO85562.1 - 0.079 13.1 0.1 0.16 12.2 0.1 1.5 1 0 0 1 1 1 0 Modulator of Rho-dependent transcription termination (ROF) TFB6 PF17110.5 RKO85562.1 - 0.72 9.6 6.2 0.17 11.6 2.9 1.6 1 1 1 2 2 2 0 Subunit 11 of the general transcription factor TFIIH MAT1 PF06391.13 RKO85563.1 - 1.9e-45 155.2 19.8 2.3e-45 154.9 19.8 1.0 1 0 0 1 1 1 1 CDK-activating kinase assembly factor MAT1 zf-C3HC4_5 PF17121.5 RKO85563.1 - 4.7e-23 80.8 8.9 8.1e-23 80.1 8.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO85563.1 - 9.6e-06 25.4 4.3 2.3e-05 24.2 4.3 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 RKO85563.1 - 0.00013 21.9 8.9 0.00048 20.0 9.1 1.8 1 1 1 2 2 2 1 zinc-RING finger domain zf-RING_2 PF13639.6 RKO85563.1 - 0.00041 20.6 7.7 0.0007 19.9 7.7 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 RKO85563.1 - 0.00065 19.5 7.8 0.0015 18.3 7.8 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 RKO85563.1 - 0.0013 18.7 8.3 0.0029 17.6 8.3 1.6 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 RKO85563.1 - 0.0014 18.4 9.5 0.027 14.3 3.7 2.3 1 1 1 2 2 2 2 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 RKO85563.1 - 0.19 11.9 5.9 0.53 10.5 6.0 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING PPL4 PF18188.1 RKO85563.1 - 0.21 11.5 2.4 0.13 12.2 0.9 1.5 2 0 0 2 2 2 0 Prim-pol 4 zf-RING_4 PF14570.6 RKO85563.1 - 0.21 11.4 4.2 1.9 8.4 1.9 2.3 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-rbx1 PF12678.7 RKO85563.1 - 0.24 11.7 3.5 0.57 10.5 3.5 1.6 1 0 0 1 1 1 0 RING-H2 zinc finger domain zf-RING_6 PF14835.6 RKO85563.1 - 0.33 10.9 5.2 0.44 10.5 0.9 2.3 1 1 1 2 2 2 0 zf-RING of BARD1-type protein V_ATPase_I PF01496.19 RKO85563.1 - 0.71 7.7 9.6 0.85 7.5 9.6 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family WAC_Acf1_DNA_bd PF10537.9 RKO85565.1 - 3.5e-27 94.9 0.1 4.9e-27 94.4 0.1 1.2 1 0 0 1 1 1 1 ATP-utilising chromatin assembly and remodelling N-terminal Nrap_D4 PF17405.2 RKO85566.1 - 1.2e-47 162.1 0.0 1.9e-47 161.4 0.0 1.3 1 0 0 1 1 1 1 Nrap protein nucleotidyltransferase domain 4 Nrap_D5 PF17406.2 RKO85566.1 - 1.1e-46 158.6 0.0 7e-46 155.9 0.0 2.0 2 0 0 2 2 2 1 Nrap protein PAP/OAS1-like domain 5 Nrap PF03813.14 RKO85566.1 - 3.5e-46 157.0 0.0 5.6e-46 156.4 0.0 1.3 1 0 0 1 1 1 1 Nrap protein domain 1 Nrap_D2 PF17403.2 RKO85566.1 - 1.8e-44 151.2 0.0 7.2e-44 149.2 0.0 1.9 2 0 0 2 2 2 1 Nrap protein PAP/OAS-like domain Nrap_D3 PF17404.2 RKO85566.1 - 3.7e-40 137.6 0.0 5.6e-40 137.0 0.0 1.3 1 0 0 1 1 1 1 Nrap protein domain 3 RNA_pol_Rpb5_C PF01191.19 RKO85568.1 - 5.2e-16 58.3 0.0 5.6e-16 58.2 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain NFACT-R_1 PF05670.13 RKO85570.1 - 7.8e-31 106.9 0.0 2.8e-30 105.2 0.0 1.9 2 0 0 2 2 2 1 NFACT protein RNA binding domain FbpA PF05833.11 RKO85570.1 - 3.5e-05 22.8 0.2 4.2e-05 22.5 0.2 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NPR3 PF03666.13 RKO85571.1 - 5.3 5.7 7.8 6.7 5.4 7.8 1.0 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Ank_4 PF13637.6 RKO85572.1 - 7.4e-05 23.2 0.0 0.043 14.4 0.0 3.2 2 1 0 2 2 2 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO85572.1 - 0.00059 20.1 0.0 0.64 10.4 0.1 3.4 3 1 1 4 4 4 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO85572.1 - 0.0051 17.4 0.0 0.2 12.2 0.0 2.3 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO85572.1 - 0.067 13.8 0.1 3 8.7 0.0 3.4 5 0 0 5 5 5 0 Ankyrin repeat F-box PF00646.33 RKO85572.1 - 0.16 11.9 1.5 1.2 9.1 0.7 2.6 2 1 0 2 2 2 0 F-box domain PQQ_2 PF13360.6 RKO85573.1 - 2.4e-20 73.1 0.3 1.1e-11 44.8 0.3 3.1 1 1 1 2 2 2 2 PQQ-like domain PQQ PF01011.21 RKO85573.1 - 1.2e-09 37.6 0.8 0.022 14.7 0.0 6.0 5 0 0 5 5 5 3 PQQ enzyme repeat PQQ_3 PF13570.6 RKO85573.1 - 2e-09 37.6 14.3 0.0053 17.2 2.0 8.8 9 0 0 9 9 9 2 PQQ-like domain CYSTM PF12734.7 RKO85574.1 - 7.7e-06 26.1 9.7 7.7e-06 26.1 9.7 3.4 3 0 0 3 3 3 1 Cysteine-rich TM module stress tolerance Ras PF00071.22 RKO85575.1 - 4.6e-28 97.8 0.0 6.3e-28 97.4 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO85575.1 - 2.2e-06 27.9 0.1 3.4e-06 27.3 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Pox_E2-like PF04497.12 RKO85575.1 - 0.05 12.1 0.1 0.063 11.7 0.1 1.0 1 0 0 1 1 1 0 Poxviridae protein FA_desaturase PF00487.24 RKO85576.1 - 8.9e-34 117.5 23.6 8.9e-34 117.5 23.6 1.5 2 0 0 2 2 2 1 Fatty acid desaturase Sre PF03125.18 RKO85576.1 - 0.056 12.6 2.1 0.093 11.9 2.1 1.3 1 0 0 1 1 1 0 C. elegans Sre G protein-coupled chemoreceptor SDA1 PF05285.12 RKO85577.1 - 0.52 9.7 16.0 0.71 9.2 16.0 1.3 1 0 0 1 1 1 0 SDA1 BUD22 PF09073.10 RKO85577.1 - 9.1 5.5 19.1 12 5.1 19.1 1.1 1 0 0 1 1 1 0 BUD22 NIF PF03031.18 RKO85579.1 - 5e-30 104.3 0.2 5.8e-30 104.1 0.2 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase HAD PF12710.7 RKO85579.1 - 0.0017 18.8 0.4 0.024 15.1 0.0 2.0 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Gly_transf_sug PF04488.15 RKO85580.1 - 1.2e-11 45.1 0.0 1.8e-11 44.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase sugar-binding region containing DXD motif Gb3_synth PF04572.12 RKO85580.1 - 0.093 12.9 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 Alpha 1,4-glycosyltransferase conserved region AhpC-TSA PF00578.21 RKO85581.1 - 4.3e-12 46.0 0.0 6.6e-12 45.4 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 RKO85581.1 - 3.2e-10 39.9 0.0 4.8e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 Redoxin F5_F8_type_C PF00754.25 RKO85584.1 - 6.7e-08 32.7 0.0 8e-08 32.5 0.0 1.1 1 0 0 1 1 1 1 F5/8 type C domain Sad1_UNC PF07738.13 RKO85584.1 - 8.7e-05 22.5 0.0 0.00014 21.9 0.0 1.4 1 1 0 1 1 1 1 Sad1 / UNC-like C-terminal ANAPC10 PF03256.16 RKO85584.1 - 0.049 13.3 0.0 0.088 12.4 0.0 1.4 1 0 0 1 1 1 0 Anaphase-promoting complex, subunit 10 (APC10) AMP-binding PF00501.28 RKO85585.1 - 3.6e-22 78.6 0.0 4.5e-22 78.2 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme DUF5383 PF17355.2 RKO85586.1 - 0.22 11.9 0.0 0.26 11.7 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5383) CMAS PF02353.20 RKO85587.1 - 9.6e-66 221.9 0.7 1.2e-65 221.6 0.7 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.12 RKO85587.1 - 1.5e-11 44.8 0.1 2.8e-11 43.9 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 RKO85587.1 - 2.7e-10 40.8 0.2 5.3e-10 39.9 0.2 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 RKO85587.1 - 3.5e-10 40.0 0.0 6.3e-10 39.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 RKO85587.1 - 2.8e-06 28.0 0.0 5.1e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 RKO85587.1 - 7.9e-05 22.3 0.0 0.00013 21.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 RKO85587.1 - 0.00064 19.5 0.0 0.0013 18.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 RKO85587.1 - 0.012 15.3 0.1 0.13 12.0 0.1 2.3 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 RrnaAD PF00398.20 RKO85587.1 - 0.013 14.6 0.0 0.02 14.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase PrmA PF06325.13 RKO85587.1 - 0.022 14.2 0.0 0.032 13.6 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DOT1 PF08123.13 RKO85587.1 - 0.044 13.3 0.0 0.075 12.5 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 PCMT PF01135.19 RKO85587.1 - 0.088 12.5 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_18 PF12847.7 RKO85587.1 - 0.19 11.7 0.0 0.32 10.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Ima1_N PF09779.9 RKO85588.1 - 0.097 13.5 0.1 0.54 11.1 0.0 2.1 2 0 0 2 2 2 0 Ima1 N-terminal domain DEFB136 PF17333.2 RKO85594.1 - 0.039 13.9 1.1 0.1 12.6 1.1 1.7 1 0 0 1 1 1 0 Beta defensin 136 4HBT_3 PF13622.6 RKO85595.1 - 0.00018 21.8 0.2 0.00027 21.3 0.0 1.4 2 0 0 2 2 2 1 Thioesterase-like superfamily PhoLip_ATPase_N PF16209.5 RKO85597.1 - 4.2e-21 74.4 1.7 6.1e-21 73.9 1.7 1.3 1 0 0 1 1 1 1 Phospholipid-translocating ATPase N-terminal ATG16 PF08614.11 RKO85598.1 - 0.00012 22.3 30.5 0.024 14.9 4.4 4.2 3 1 1 4 4 4 2 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.8 RKO85598.1 - 0.00019 21.3 14.1 0.2 11.7 0.5 4.4 2 1 2 4 4 4 2 TATA element modulatory factor 1 DNA binding Atg14 PF10186.9 RKO85598.1 - 0.0069 15.5 13.0 0.42 9.7 6.7 2.4 2 0 0 2 2 2 2 Vacuolar sorting 38 and autophagy-related subunit 14 Spectrin PF00435.21 RKO85598.1 - 0.014 15.9 11.1 2.9 8.4 0.7 4.2 3 1 0 4 4 4 0 Spectrin repeat Phage_GP20 PF06810.11 RKO85598.1 - 0.021 14.6 9.2 0.078 12.8 0.4 3.0 2 1 1 3 3 3 0 Phage minor structural protein GP20 Nsp1_C PF05064.13 RKO85598.1 - 0.029 14.2 0.5 0.88 9.4 0.2 3.0 3 0 0 3 3 3 0 Nsp1-like C-terminal region DUF4472 PF14739.6 RKO85598.1 - 0.034 14.9 2.6 0.034 14.9 2.6 3.3 3 1 0 3 3 3 0 Domain of unknown function (DUF4472) FliS PF02561.14 RKO85598.1 - 0.038 14.3 2.1 0.12 12.6 0.3 2.4 2 0 0 2 2 2 0 Flagellar protein FliS GAS PF13851.6 RKO85598.1 - 0.04 13.3 16.3 1.1 8.5 7.8 3.0 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding DUF948 PF06103.11 RKO85598.1 - 0.06 13.6 1.8 8.8 6.7 0.2 2.9 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) PI3K_P85_iSH2 PF16454.5 RKO85598.1 - 0.077 12.6 6.6 3.3 7.3 1.6 2.9 2 2 1 3 3 3 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain DUF4407 PF14362.6 RKO85598.1 - 0.087 12.2 21.9 1.1 8.5 0.6 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4407) Mod_r PF07200.13 RKO85598.1 - 0.088 12.9 9.6 2.8 8.0 4.4 3.3 3 1 0 3 3 3 0 Modifier of rudimentary (Mod(r)) protein Filament PF00038.21 RKO85598.1 - 0.12 12.0 20.6 0.47 10.0 10.2 2.9 3 1 0 3 3 3 0 Intermediate filament protein FlxA PF14282.6 RKO85598.1 - 0.13 12.3 6.2 2.3 8.3 0.0 3.3 2 1 0 3 3 3 0 FlxA-like protein DNA_repr_REX1B PF14966.6 RKO85598.1 - 0.14 12.8 0.5 0.14 12.8 0.5 2.5 3 1 1 4 4 1 0 DNA repair REX1-B HAUS-augmin3 PF14932.6 RKO85598.1 - 0.44 10.1 15.7 1.4 8.4 2.1 3.3 2 1 1 3 3 3 0 HAUS augmin-like complex subunit 3 KASH_CCD PF14662.6 RKO85598.1 - 0.52 10.1 13.9 2 8.2 7.5 3.2 2 1 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH Lebercilin PF15619.6 RKO85598.1 - 0.73 9.5 19.4 0.43 10.2 0.9 3.9 3 1 1 4 4 4 0 Ciliary protein causing Leber congenital amaurosis disease CALCOCO1 PF07888.11 RKO85598.1 - 0.76 8.6 20.6 0.65 8.8 2.4 2.5 2 0 0 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like EzrA PF06160.12 RKO85598.1 - 0.83 7.8 10.5 2.4 6.2 3.0 2.7 3 0 0 3 3 3 0 Septation ring formation regulator, EzrA TSC22 PF01166.18 RKO85598.1 - 0.83 10.0 4.0 1.7 9.0 0.3 2.8 3 0 0 3 3 2 0 TSC-22/dip/bun family APG6_N PF17675.1 RKO85598.1 - 0.98 10.0 28.4 6.1 7.4 1.9 3.8 3 1 0 3 3 3 0 Apg6 coiled-coil region DUF4618 PF15397.6 RKO85598.1 - 1.3 8.3 6.5 2.7 7.3 0.7 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4618) Spc7 PF08317.11 RKO85598.1 - 1.4 7.7 18.4 0.84 8.5 1.1 2.4 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF3450 PF11932.8 RKO85598.1 - 1.5 8.1 13.4 0.21 10.8 4.1 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF3450) Sec34 PF04136.15 RKO85598.1 - 2 8.3 4.8 0.69 9.8 0.2 2.4 3 0 0 3 3 3 0 Sec34-like family COG2 PF06148.11 RKO85598.1 - 2.5 8.2 6.7 11 6.1 0.3 2.8 2 1 0 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 CENP-F_leu_zip PF10473.9 RKO85598.1 - 2.5 8.1 17.9 18 5.3 9.8 3.5 3 1 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Fib_alpha PF08702.10 RKO85598.1 - 3.3 7.9 8.1 12 6.1 1.0 2.8 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family BST2 PF16716.5 RKO85598.1 - 3.5 8.3 10.9 6.5 7.4 1.6 3.3 2 1 1 3 3 3 0 Bone marrow stromal antigen 2 Syntaxin-6_N PF09177.11 RKO85598.1 - 4.1 8.0 14.5 2.2 8.9 3.0 3.5 3 1 1 4 4 4 0 Syntaxin 6, N-terminal DUF16 PF01519.16 RKO85598.1 - 5.9 7.4 7.2 12 6.4 0.9 3.0 2 1 1 3 3 3 0 Protein of unknown function DUF16 DUF1664 PF07889.12 RKO85598.1 - 6.6 6.8 8.0 8.7 6.4 0.3 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) Prefoldin_2 PF01920.20 RKO85598.1 - 7 6.7 12.2 3.5 7.6 0.2 3.2 4 0 0 4 4 2 0 Prefoldin subunit TPR_MLP1_2 PF07926.12 RKO85598.1 - 8.2 6.5 28.1 3.7 7.6 1.2 3.4 3 1 0 3 3 3 0 TPR/MLP1/MLP2-like protein YabA PF06156.13 RKO85598.1 - 8.2 7.1 5.9 17 6.1 0.2 3.1 2 2 3 5 5 5 0 Initiation control protein YabA ERM PF00769.19 RKO85598.1 - 8.3 6.1 29.2 7 6.4 21.0 2.8 2 1 0 2 2 2 0 Ezrin/radixin/moesin family Sporozoite_P67 PF05642.11 RKO85602.1 - 0.012 13.7 0.6 0.021 13.0 0.6 1.4 1 1 0 1 1 1 0 Sporozoite P67 surface antigen R3H PF01424.22 RKO85602.1 - 0.06 13.3 0.0 0.21 11.6 0.0 1.8 2 0 0 2 2 2 0 R3H domain OST3_OST6 PF04756.13 RKO85603.1 - 3.7e-84 282.5 0.0 4.1e-84 282.4 0.0 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family 7TMR-DISM_7TM PF07695.11 RKO85603.1 - 0.015 15.2 3.5 0.031 14.2 3.5 1.5 1 1 0 1 1 1 0 7TM diverse intracellular signalling MerC PF03203.14 RKO85603.1 - 0.072 13.5 4.4 0.79 10.2 1.2 2.3 2 0 0 2 2 2 0 MerC mercury resistance protein Thioredoxin PF00085.20 RKO85603.1 - 0.094 12.7 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin Kelch_4 PF13418.6 RKO85604.1 - 5.8e-11 42.2 1.1 0.0018 18.2 0.0 3.5 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO85604.1 - 3.4e-06 26.9 2.5 0.00034 20.5 0.0 3.8 4 0 0 4 4 4 1 Kelch motif Kelch_3 PF13415.6 RKO85604.1 - 0.023 15.0 5.4 0.067 13.5 0.1 3.9 5 0 0 5 5 5 0 Galactose oxidase, central domain F-box-like PF12937.7 RKO85606.1 - 9.5e-10 38.2 1.2 2.5e-09 36.9 1.2 1.7 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO85606.1 - 0.00025 20.8 0.2 0.00054 19.8 0.2 1.5 1 0 0 1 1 1 1 F-box domain AMP-binding PF00501.28 RKO85608.1 - 0.059 12.0 0.0 0.12 11.0 0.0 1.4 2 0 0 2 2 2 0 AMP-binding enzyme MMM1 PF10296.9 RKO85610.1 - 6.9e-06 25.3 0.0 8.6e-06 25.0 0.0 1.1 1 0 0 1 1 1 1 Maintenance of mitochondrial morphology protein 1 Plasmod_dom_1 PF09715.10 RKO85610.1 - 0.24 11.5 0.4 0.42 10.7 0.4 1.4 1 0 0 1 1 1 0 Plasmodium protein of unknown function (Plasmod_dom_1) DUF2616 PF11077.8 RKO85611.1 - 0.028 14.1 0.0 0.033 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2616) TTL PF03133.15 RKO85612.1 - 1.8e-93 312.9 0.4 2.3e-93 312.5 0.4 1.0 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 RKO85612.1 - 4.7e-07 29.3 0.0 0.00029 20.2 0.0 2.3 2 0 0 2 2 2 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 RKO85612.1 - 0.00025 20.4 0.0 0.04 13.2 0.0 2.2 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp Glyco_trans_2_3 PF13632.6 RKO85615.1 - 9e-29 100.8 6.3 9e-29 100.8 6.3 2.8 3 1 0 3 3 3 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 RKO85615.1 - 4.8e-12 46.3 0.1 7.1e-12 45.7 0.1 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Acyl_transf_3 PF01757.22 RKO85615.1 - 4.7e-06 25.9 8.5 4.7e-06 25.9 8.5 3.2 3 0 0 3 3 3 1 Acyltransferase family Hemocyanin_M PF00372.19 RKO85615.1 - 0.14 11.4 0.0 0.22 10.7 0.0 1.3 1 0 0 1 1 1 0 Hemocyanin, copper containing domain Glyco_transf_21 PF13506.6 RKO85615.1 - 0.18 11.3 0.0 0.43 10.0 0.0 1.6 2 0 0 2 2 2 0 Glycosyl transferase family 21 Inhibitor_I42 PF09394.10 RKO85616.1 - 0.0057 17.0 0.8 0.034 14.5 0.7 2.1 1 1 1 2 2 2 2 Chagasin family peptidase inhibitor I42 NosD PF05048.13 RKO85616.1 - 0.048 12.9 20.7 0.065 12.5 20.7 1.2 1 0 0 1 1 1 0 Periplasmic copper-binding protein (NosD) CIDE-N PF02017.15 RKO85616.1 - 0.12 12.4 0.1 4.6 7.3 0.0 2.5 1 1 1 2 2 2 0 CIDE-N domain DUF3244 PF11589.8 RKO85616.1 - 0.18 11.9 2.5 0.39 10.8 2.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF3244) PTCRA PF15028.6 RKO85616.1 - 0.36 10.5 5.3 1.4 8.6 0.2 3.5 1 1 3 4 4 4 0 Pre-T-cell antigen receptor Mannosyl_trans3 PF11051.8 RKO85619.1 - 9.3e-34 117.0 0.0 4e-33 115.0 0.0 1.8 1 1 0 1 1 1 1 Mannosyltransferase putative GDPD PF03009.17 RKO85620.1 - 1.1e-14 54.8 0.0 7.2e-13 48.9 0.0 2.0 1 1 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family DUF5086 PF16985.5 RKO85626.1 - 0.12 12.3 0.0 0.54 10.2 0.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF5086) Hydrolase_4 PF12146.8 RKO85627.1 - 8.6e-12 44.8 0.0 1.8e-11 43.8 0.0 1.5 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO85627.1 - 8.9e-08 33.0 0.2 1.4e-07 32.3 0.2 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 RKO85627.1 - 1.7e-07 31.2 0.0 2.8e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Y_phosphatase3 PF13350.6 RKO85627.1 - 4.1e-06 26.9 0.1 6.6e-06 26.3 0.1 1.4 1 0 0 1 1 1 1 Tyrosine phosphatase family Peptidase_S15 PF02129.18 RKO85627.1 - 0.0068 16.0 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) Esterase PF00756.20 RKO85627.1 - 0.011 15.4 0.0 0.018 14.7 0.0 1.4 1 0 0 1 1 1 0 Putative esterase DUF915 PF06028.11 RKO85627.1 - 0.077 12.3 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) Mito_carr PF00153.27 RKO85628.1 - 1.2e-29 102.0 0.1 3.5e-19 68.5 0.1 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein peroxidase PF00141.23 RKO85629.1 - 9.7e-15 54.9 0.0 1.2e-14 54.6 0.0 1.1 1 0 0 1 1 1 1 Peroxidase ABC_tran PF00005.27 RKO85630.1 - 3.8e-16 59.8 0.0 6.7e-16 59.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_trans_N PF14510.6 RKO85630.1 - 1.9e-11 44.4 0.1 3.6e-11 43.5 0.1 1.5 1 0 0 1 1 1 1 ABC-transporter N-terminal Pyridoxal_deC PF00282.19 RKO85631.1 - 3.3e-65 220.3 0.0 4.1e-65 219.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain SNF5 PF04855.12 RKO85632.1 - 5.5e-09 36.2 0.1 7.4e-09 35.7 0.1 1.2 1 0 0 1 1 1 1 SNF5 / SMARCB1 / INI1 Homeodomain PF00046.29 RKO85633.1 - 4.5e-05 23.2 0.1 7.2e-05 22.6 0.1 1.3 1 0 0 1 1 1 1 Homeodomain MTS_N PF08468.11 RKO85634.1 - 0.026 14.6 0.0 0.036 14.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain N-terminal SCA7 PF08313.12 RKO85634.1 - 0.026 14.4 0.5 0.038 13.9 0.5 1.4 1 0 0 1 1 1 0 SCA7, zinc-binding domain Opy2 PF09463.10 RKO85634.1 - 6.1 7.3 7.3 16 5.9 0.8 2.5 2 0 0 2 2 2 0 Opy2 protein TMEM214 PF10151.9 RKO85635.1 - 0.0065 15.0 0.5 0.079 11.4 0.0 2.0 2 0 0 2 2 2 2 TMEM214, C-terminal, caspase 4 activator XPG_I_2 PF12813.7 RKO85636.1 - 9.6e-19 67.8 0.2 2.4e-11 43.6 0.0 2.2 2 0 0 2 2 2 2 XPG domain containing XPG_N PF00752.17 RKO85636.1 - 0.099 13.1 0.0 0.44 11.1 0.0 2.1 3 0 0 3 3 3 0 XPG N-terminal domain ubiquitin PF00240.23 RKO85637.1 - 1.4e-07 31.2 0.0 2.3e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 RKO85637.1 - 0.11 12.3 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like FancD2 PF14631.6 RKO85638.1 - 7.5e-77 259.0 0.0 9.1e-69 232.2 0.0 2.0 2 0 0 2 2 2 2 Fanconi anaemia protein FancD2 nuclease FANCI_S2 PF14676.6 RKO85638.1 - 0.016 15.5 0.0 0.033 14.5 0.0 1.6 1 0 0 1 1 1 0 FANCI solenoid 2 Cyclin_N PF00134.23 RKO85639.1 - 6e-07 29.3 0.1 7.3e-07 29.0 0.1 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 RKO85639.1 - 2.6e-06 27.9 0.1 3.4e-06 27.5 0.1 1.2 1 0 0 1 1 1 1 Cyclin DNA_methylase PF00145.17 RKO85641.1 - 1.3e-34 120.0 0.0 4.4e-34 118.3 0.0 1.7 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase CK2S PF15011.6 RKO85642.1 - 0.17 11.8 0.1 0.24 11.3 0.1 1.2 1 0 0 1 1 1 0 Casein Kinase 2 substrate UQ_con PF00179.26 RKO85643.1 - 1.6e-39 134.8 0.1 1.9e-39 134.5 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UEV PF05743.13 RKO85643.1 - 0.069 13.0 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 UEV domain RWD PF05773.22 RKO85643.1 - 0.075 13.3 0.0 0.098 12.9 0.0 1.2 1 0 0 1 1 1 0 RWD domain Ribosomal_L31 PF01197.18 RKO85644.1 - 0.00013 22.1 0.0 0.00019 21.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L31 Mitoc_L55 PF09776.9 RKO85644.1 - 0.029 14.1 0.0 0.044 13.5 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L55 L51_S25_CI-B8 PF05047.16 RKO85645.1 - 0.00029 20.7 0.1 0.00058 19.7 0.1 1.5 1 0 0 1 1 1 1 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain 4HBT_3 PF13622.6 RKO85646.1 - 2.1e-23 83.9 0.1 2.5e-23 83.6 0.1 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily MCM PF00493.23 RKO85648.1 - 1.4e-83 279.5 0.0 1.9e-83 279.0 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 RKO85648.1 - 2e-32 111.7 0.0 3.5e-32 110.9 0.0 1.4 1 0 0 1 1 1 1 MCM OB domain MCM_N PF14551.6 RKO85648.1 - 2.9e-09 37.5 1.2 3.4e-08 34.0 0.9 2.6 2 1 0 2 2 2 1 MCM N-terminal domain Mg_chelatase PF01078.21 RKO85648.1 - 0.0068 15.8 0.6 0.2 11.0 0.1 2.8 2 1 0 3 3 3 1 Magnesium chelatase, subunit ChlI DEAD PF00270.29 RKO85649.1 - 3.8e-38 131.0 0.1 5.4e-38 130.5 0.1 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO85649.1 - 1.9e-29 102.2 0.3 2.1e-28 98.9 0.0 2.3 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO85649.1 - 7.8e-09 35.8 0.0 1.1e-07 32.0 0.0 2.1 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Flavi_DEAD PF07652.14 RKO85649.1 - 0.0089 16.0 0.0 0.016 15.1 0.0 1.4 1 0 0 1 1 1 1 Flavivirus DEAD domain UTP25 PF06862.12 RKO85649.1 - 0.1 11.3 1.4 7.7 5.2 0.1 2.9 2 1 0 3 3 3 0 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 SWI2_SNF2 PF18766.1 RKO85649.1 - 0.19 11.4 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 SWI2/SNF2 ATPase zf-UBR PF02207.20 RKO85652.1 - 3.1e-07 30.4 15.7 1e-05 25.6 1.7 2.6 3 0 0 3 3 3 2 Putative zinc finger in N-recognin (UBR box) Reprolysin PF01421.19 RKO85652.1 - 0.012 15.5 0.0 0.019 14.9 0.0 1.3 1 0 0 1 1 1 0 Reprolysin (M12B) family zinc metalloprotease BAH PF01426.18 RKO85652.1 - 0.021 14.7 0.2 0.031 14.1 0.2 1.3 1 0 0 1 1 1 0 BAH domain Reprolysin_3 PF13582.6 RKO85652.1 - 0.046 14.2 0.1 0.062 13.8 0.1 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like PGP_phosphatase PF09419.10 RKO85653.1 - 1.5e-45 154.9 0.0 1.8e-45 154.6 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial PGP phosphatase Hydrolase_like PF13242.6 RKO85653.1 - 6.3e-05 23.0 0.0 0.00013 22.0 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 RKO85653.1 - 0.003 17.9 0.0 0.25 11.6 0.0 2.2 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase PLA2_B PF01735.18 RKO85654.1 - 8.7e-32 110.2 0.3 9.7e-32 110.0 0.3 1.0 1 0 0 1 1 1 1 Lysophospholipase catalytic domain Gpr1_Fun34_YaaH PF01184.19 RKO85655.1 - 9.6e-58 195.2 19.2 1.1e-57 195.0 19.2 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family Gpr1_Fun34_YaaH PF01184.19 RKO85656.1 - 2.7e-19 69.6 0.1 3.5e-19 69.2 0.1 1.1 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family FATC PF02260.20 RKO85656.1 - 0.16 11.8 0.0 0.36 10.7 0.0 1.5 1 0 0 1 1 1 0 FATC domain GST_N PF02798.20 RKO85657.1 - 2.8e-17 62.8 0.0 4.7e-17 62.1 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 RKO85657.1 - 3.3e-12 46.7 0.0 5.3e-12 46.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 RKO85657.1 - 1.4e-10 41.3 0.0 2.3e-10 40.6 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 RKO85657.1 - 0.0017 18.3 0.0 0.0031 17.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C PF00043.25 RKO85657.1 - 0.018 15.2 0.0 0.03 14.5 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain LRR_4 PF12799.7 RKO85659.1 - 0.029 14.8 0.2 2 8.9 0.0 2.8 3 0 0 3 3 3 0 Leucine Rich repeats (2 copies) Ectatomin PF06457.11 RKO85660.1 - 0.058 13.3 0.2 0.13 12.2 0.2 1.7 2 0 0 2 2 2 0 Ectatomin Thiol_cytolysin PF01289.19 RKO85662.1 - 0.15 11.0 0.0 0.19 10.6 0.0 1.1 1 0 0 1 1 1 0 Thiol-activated cytolysin Phosphoesterase PF04185.14 RKO85664.1 - 4.3e-05 22.9 0.0 4.5e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Phosphoesterase family Choline_kinase PF01633.20 RKO85668.1 - 2.3e-59 200.6 0.0 2.9e-59 200.2 0.0 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase APG6_N PF17675.1 RKO85669.1 - 0.00018 22.1 1.5 0.00021 21.9 1.5 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region COG2 PF06148.11 RKO85669.1 - 0.00039 20.5 0.3 0.00058 20.0 0.3 1.2 1 0 0 1 1 1 1 COG (conserved oligomeric Golgi) complex component, COG2 Seryl_tRNA_N PF02403.22 RKO85669.1 - 0.0015 18.8 6.4 0.002 18.3 6.4 1.1 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain DHC_N1 PF08385.12 RKO85669.1 - 0.0035 16.0 0.1 0.0046 15.7 0.1 1.1 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 1 KIAA1328 PF15369.6 RKO85669.1 - 0.0059 16.5 6.5 0.0074 16.2 6.5 1.1 1 0 0 1 1 1 1 Uncharacterised protein KIAA1328 CAGE1 PF15066.6 RKO85669.1 - 0.032 12.9 1.9 0.037 12.7 1.9 1.1 1 0 0 1 1 1 0 Cancer-associated gene protein 1 family Nnf1 PF03980.14 RKO85669.1 - 0.036 14.4 4.0 0.51 10.7 0.0 2.3 2 0 0 2 2 2 0 Nnf1 KNOX2 PF03791.13 RKO85669.1 - 0.039 13.4 1.0 0.076 12.5 1.0 1.4 1 0 0 1 1 1 0 KNOX2 domain CENP-F_leu_zip PF10473.9 RKO85669.1 - 0.07 13.2 5.8 0.1 12.6 5.8 1.2 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cnn_1N PF07989.11 RKO85669.1 - 0.088 13.0 3.0 0.25 11.5 3.0 1.8 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 Atg14 PF10186.9 RKO85669.1 - 0.097 11.7 2.0 0.13 11.3 2.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Wtap PF17098.5 RKO85669.1 - 0.14 12.0 8.4 0.51 10.3 6.8 1.9 1 1 1 2 2 2 0 WTAP/Mum2p family YabA PF06156.13 RKO85669.1 - 0.3 11.8 3.2 0.45 11.2 3.2 1.3 1 0 0 1 1 1 0 Initiation control protein YabA IFT20 PF14931.6 RKO85669.1 - 0.32 11.2 5.2 0.46 10.7 5.2 1.3 1 0 0 1 1 1 0 Intraflagellar transport complex B, subunit 20 TEX13 PF15186.6 RKO85669.1 - 0.46 10.2 6.3 0.61 9.8 6.3 1.2 1 0 0 1 1 1 0 Testis-expressed sequence 13 protein family FUSC PF04632.12 RKO85669.1 - 0.5 8.8 3.4 0.67 8.4 3.4 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF1664 PF07889.12 RKO85669.1 - 0.68 10.0 2.9 1.1 9.3 2.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Sec2p PF06428.11 RKO85669.1 - 0.72 9.9 11.0 3.1 7.8 11.0 1.8 1 1 0 1 1 1 0 GDP/GTP exchange factor Sec2p Apolipoprotein PF01442.18 RKO85669.1 - 0.78 9.6 11.3 0.75 9.6 1.7 1.9 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain TMF_TATA_bd PF12325.8 RKO85669.1 - 0.89 9.8 8.3 1.8 8.8 5.6 2.0 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Spc7 PF08317.11 RKO85669.1 - 1 8.1 9.0 1.7 7.5 9.0 1.3 1 1 0 1 1 1 0 Spc7 kinetochore protein FlaC_arch PF05377.11 RKO85669.1 - 1.2 9.6 4.0 6.3 7.3 2.6 2.1 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) TPR_MLP1_2 PF07926.12 RKO85669.1 - 1.9 8.5 13.1 3 7.9 6.1 2.0 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF5082 PF16888.5 RKO85669.1 - 4.3 7.6 8.8 8.6 6.7 1.2 2.1 1 1 2 3 3 3 0 Domain of unknown function (DUF5082) Spc24 PF08286.11 RKO85669.1 - 5 7.4 8.4 2.5e+02 2.0 8.4 2.1 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 Vps4_C PF09336.10 RKO85670.1 - 0.18 11.8 0.0 0.45 10.6 0.0 1.6 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain Spore_coat_CotO PF14153.6 RKO85670.1 - 2.5 8.0 6.3 2.9 7.8 6.3 1.1 1 0 0 1 1 1 0 Spore coat protein CotO TAL_FSA PF00923.19 RKO85672.1 - 1.7e-100 336.1 0.0 2e-100 335.9 0.0 1.0 1 0 0 1 1 1 1 Transaldolase/Fructose-6-phosphate aldolase Axin_b-cat_bind PF08833.10 RKO85674.1 - 0.63 10.2 5.6 4 7.6 1.5 2.6 2 0 0 2 2 2 0 Axin beta-catenin binding domain CBFD_NFYB_HMF PF00808.23 RKO85675.1 - 4.3e-21 75.0 0.7 4.9e-21 74.8 0.7 1.1 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 RKO85675.1 - 1.6e-17 64.1 0.3 1.7e-17 64.0 0.3 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-X PF09415.10 RKO85675.1 - 0.0065 16.8 0.2 0.0076 16.5 0.2 1.1 1 0 0 1 1 1 1 CENP-S associating Centromere protein X CENP-W PF15510.6 RKO85675.1 - 0.031 14.5 0.1 0.039 14.2 0.1 1.1 1 0 0 1 1 1 0 CENP-W protein ISP3_C PF18045.1 RKO85675.1 - 0.07 13.0 0.1 0.22 11.4 0.0 1.7 1 1 1 2 2 2 0 ISP3 C-terminal TAFII28 PF04719.14 RKO85675.1 - 0.074 13.1 0.1 0.086 12.9 0.1 1.1 1 0 0 1 1 1 0 hTAFII28-like protein conserved region DUF4140 PF13600.6 RKO85676.1 - 0.018 15.4 4.6 1.5 9.3 1.5 2.2 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) Pkinase PF00069.25 RKO85677.1 - 9.5e-10 38.3 0.0 1.6e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO85677.1 - 1.3e-06 27.9 0.0 2.3e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Cnn_1N PF07989.11 RKO85677.1 - 0.13 12.5 0.0 0.27 11.4 0.0 1.5 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 D5_N PF08706.11 RKO85679.1 - 4.2e-10 40.1 0.6 3.7e-07 30.5 0.4 3.1 2 1 1 3 3 3 2 D5 N terminal like Beta-lactamase PF00144.24 RKO85681.1 - 1.4e-28 100.1 0.1 2.4e-28 99.4 0.1 1.3 1 0 0 1 1 1 1 Beta-lactamase DUF3471 PF11954.8 RKO85681.1 - 2.3e-07 31.2 0.0 4.4e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3471) Peptidase_S11 PF00768.20 RKO85681.1 - 0.0066 15.9 0.0 0.01 15.3 0.0 1.2 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase NUMOD4 PF07463.11 RKO85681.1 - 0.092 13.0 0.0 0.2 11.9 0.0 1.5 1 0 0 1 1 1 0 NUMOD4 motif Menin PF05053.13 RKO85683.1 - 0.14 10.5 0.0 0.19 10.1 0.0 1.1 1 0 0 1 1 1 0 Menin HSP20 PF00011.21 RKO85685.1 - 7.2e-11 42.1 0.0 8e-11 42.0 0.0 1.0 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 RKO85685.1 - 1.3e-05 24.7 0.0 2.7e-05 23.7 0.0 1.5 1 1 0 1 1 1 1 HSP20-like domain found in ArsA SH3_1 PF00018.28 RKO85687.1 - 5.5e-13 48.3 0.0 5.6e-07 29.1 0.0 2.3 2 0 0 2 2 2 2 SH3 domain SH3_9 PF14604.6 RKO85687.1 - 1.5e-08 34.4 0.0 0.0024 17.7 0.0 2.3 2 0 0 2 2 2 2 Variant SH3 domain SH3_2 PF07653.17 RKO85687.1 - 0.00026 20.6 0.0 0.37 10.5 0.0 2.5 2 0 0 2 2 2 2 Variant SH3 domain EphA2_TM PF14575.6 RKO85687.1 - 0.019 15.8 0.0 0.03 15.2 0.0 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain AlaDh_PNT_N PF05222.15 RKO85688.1 - 4.4e-42 143.6 0.0 5.3e-42 143.3 0.0 1.0 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, N-terminal domain 3D PF06725.11 RKO85688.1 - 0.024 14.8 0.1 0.042 14.0 0.1 1.4 1 0 0 1 1 1 0 3D domain EMP70 PF02990.16 RKO85692.1 - 6e-125 417.9 0.4 8.9e-125 417.3 0.2 1.2 1 1 0 1 1 1 1 Endomembrane protein 70 EMP70 PF02990.16 RKO85693.1 - 0.00018 20.3 6.6 0.00018 20.3 6.6 1.8 2 0 0 2 2 2 1 Endomembrane protein 70 MgtE PF01769.16 RKO85693.1 - 0.76 10.2 7.5 0.84 10.0 7.5 1.1 1 0 0 1 1 1 0 Divalent cation transporter FAD_binding_3 PF01494.19 RKO85694.1 - 5.8e-17 62.0 0.3 1.6e-07 30.9 0.1 2.1 2 0 0 2 2 2 2 FAD binding domain Trp_halogenase PF04820.14 RKO85694.1 - 0.00025 20.0 0.1 0.089 11.6 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase NAD_binding_8 PF13450.6 RKO85694.1 - 0.00065 19.9 0.0 0.0019 18.4 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 RKO85694.1 - 0.005 16.5 0.2 0.0095 15.6 0.2 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase ApbA PF02558.16 RKO85694.1 - 0.0086 15.7 0.0 0.014 15.0 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Pyr_redox PF00070.27 RKO85694.1 - 0.019 15.5 0.0 0.094 13.3 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 RKO85694.1 - 0.054 12.7 0.1 0.21 10.8 0.0 1.9 1 1 1 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase CoA_transf_3 PF02515.17 RKO85694.1 - 0.14 11.3 0.9 0.26 10.4 0.1 1.8 2 0 0 2 2 2 0 CoA-transferase family III Actin PF00022.19 RKO85697.1 - 1.4e-34 119.4 0.0 2e-33 115.6 0.0 2.0 1 1 0 1 1 1 1 Actin TRP PF06011.12 RKO85698.1 - 1.2e-05 24.2 0.0 4.8e-05 22.3 0.0 1.7 1 1 1 2 2 2 1 Transient receptor potential (TRP) ion channel NMO PF03060.15 RKO85699.1 - 1.7e-09 37.6 0.1 1.6e-08 34.4 0.0 1.9 1 1 1 2 2 2 2 Nitronate monooxygenase ADIP PF11559.8 RKO85702.1 - 0.00091 19.3 9.7 0.00091 19.3 9.7 2.2 1 1 1 2 2 1 1 Afadin- and alpha -actinin-Binding APG6_N PF17675.1 RKO85702.1 - 0.0028 18.2 13.5 0.0028 18.2 13.5 2.1 1 1 1 2 2 2 1 Apg6 coiled-coil region HAP1_N PF04849.13 RKO85702.1 - 0.005 16.1 24.3 0.014 14.6 24.3 1.6 1 1 0 1 1 1 1 HAP1 N-terminal conserved region DUF3584 PF12128.8 RKO85702.1 - 0.012 13.2 24.3 0.015 12.8 24.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Baculo_PEP_C PF04513.12 RKO85702.1 - 0.013 15.5 0.8 0.026 14.5 0.8 1.6 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Snapin_Pallidin PF14712.6 RKO85702.1 - 0.034 14.6 2.0 0.034 14.6 2.0 2.7 1 1 2 3 3 3 0 Snapin/Pallidin Filament PF00038.21 RKO85702.1 - 0.037 13.6 19.5 0.32 10.5 19.5 2.0 1 1 0 1 1 1 0 Intermediate filament protein DASH_Hsk3 PF08227.11 RKO85702.1 - 0.066 13.6 0.6 0.066 13.6 0.6 3.1 2 1 1 3 3 3 0 DASH complex subunit Hsk3 like TSC22 PF01166.18 RKO85702.1 - 0.071 13.4 5.1 0.16 12.3 1.4 2.7 1 1 1 2 2 2 0 TSC-22/dip/bun family Phage_GP20 PF06810.11 RKO85702.1 - 0.08 12.7 20.1 0.18 11.6 1.7 3.0 1 1 1 2 2 2 0 Phage minor structural protein GP20 DUF5617 PF18493.1 RKO85702.1 - 0.16 12.1 1.3 0.48 10.5 0.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5617) Hydin_ADK PF17213.3 RKO85702.1 - 0.17 12.1 7.3 0.26 11.5 7.3 1.3 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain HDV_ag PF01517.18 RKO85702.1 - 0.2 11.5 8.0 2.1 8.1 0.3 2.4 1 1 1 2 2 2 0 Hepatitis delta virus delta antigen Seryl_tRNA_N PF02403.22 RKO85702.1 - 0.31 11.3 23.4 0.068 13.4 14.5 2.9 1 1 2 3 3 3 0 Seryl-tRNA synthetase N-terminal domain Sec34 PF04136.15 RKO85702.1 - 0.48 10.3 7.0 0.33 10.8 5.2 1.6 1 1 0 1 1 1 0 Sec34-like family NPV_P10 PF05531.12 RKO85702.1 - 0.52 10.8 3.2 10 6.7 0.1 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein BLOC1_2 PF10046.9 RKO85702.1 - 0.55 10.6 11.0 0.28 11.5 8.0 2.0 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 KASH_CCD PF14662.6 RKO85702.1 - 0.64 9.8 25.1 5.3 6.8 25.0 2.1 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH Spc7 PF08317.11 RKO85702.1 - 0.7 8.7 25.2 0.011 14.6 11.7 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein Prominin PF05478.11 RKO85702.1 - 0.78 7.6 6.8 1 7.3 6.8 1.1 1 0 0 1 1 1 0 Prominin DUF3450 PF11932.8 RKO85702.1 - 1.3 8.3 21.4 10 5.3 21.4 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) Laminin_II PF06009.12 RKO85702.1 - 1.4 8.9 14.0 4 7.4 6.4 2.5 1 1 1 2 2 2 0 Laminin Domain II DUF1664 PF07889.12 RKO85702.1 - 2.3 8.3 9.2 0.54 10.3 3.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) GAS PF13851.6 RKO85702.1 - 2.4 7.5 25.0 0.028 13.8 9.7 2.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF948 PF06103.11 RKO85702.1 - 2.4 8.5 4.9 1.7 9.0 0.5 2.4 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) FlaC_arch PF05377.11 RKO85702.1 - 3.8 8.0 6.1 3.5 8.1 1.9 2.9 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Sipho_Gp157 PF05565.11 RKO85702.1 - 3.8 7.5 17.0 1.2 9.1 6.4 2.2 1 1 1 2 2 2 0 Siphovirus Gp157 YscO PF07321.12 RKO85702.1 - 4 7.4 29.0 0.42 10.6 13.9 2.1 1 1 1 2 2 2 0 Type III secretion protein YscO YabA PF06156.13 RKO85702.1 - 4.8 7.9 15.5 9.7 6.9 0.2 3.0 1 1 2 3 3 3 0 Initiation control protein YabA DUF724 PF05266.14 RKO85702.1 - 8.2 6.2 21.5 2.3 8.0 5.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Cnn_1N PF07989.11 RKO85702.1 - 9.2 6.5 19.0 6.3 7.0 12.1 3.3 2 1 1 3 3 3 0 Centrosomin N-terminal motif 1 UPF0242 PF06785.11 RKO85702.1 - 9.9 6.2 22.2 64 3.6 22.2 2.0 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Peptidase_S9_N PF02897.15 RKO85703.1 - 6.7e-89 298.5 0.1 8.4e-89 298.2 0.1 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Pap_E4 PF02711.14 RKO85704.1 - 1.9 9.5 6.2 0.33 12.0 1.9 2.0 2 0 0 2 2 2 0 E4 protein ubiquitin PF00240.23 RKO85705.1 - 1e-17 63.6 0.0 1.4e-17 63.2 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 RKO85705.1 - 6.5e-06 25.9 0.0 1e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 RKO85705.1 - 0.24 11.5 0.4 24 5.1 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin-like domain TelA PF05816.11 RKO85706.1 - 0.0055 15.8 2.3 0.008 15.3 2.3 1.2 1 0 0 1 1 1 1 Toxic anion resistance protein (TelA) p450 PF00067.22 RKO85708.1 - 3e-43 148.2 0.0 3.3e-43 148.1 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Tet_JBP PF12851.7 RKO85708.1 - 0.076 12.4 0.1 0.092 12.1 0.1 1.1 1 0 0 1 1 1 0 Oxygenase domain of the 2OGFeDO superfamily LSM PF01423.22 RKO85711.1 - 4.7e-19 67.8 0.1 5.7e-19 67.6 0.1 1.1 1 0 0 1 1 1 1 LSM domain DUF4775 PF16001.5 RKO85711.1 - 1.4 8.3 3.3 1.9 7.8 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4775) AICARFT_IMPCHas PF01808.18 RKO85712.1 - 6.2e-93 311.5 0.0 8.4e-93 311.0 0.0 1.2 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.22 RKO85712.1 - 3.3e-24 84.9 0.0 6.5e-24 83.9 0.0 1.5 1 0 0 1 1 1 1 MGS-like domain Ribosomal_L12_N PF16320.5 RKO85712.1 - 0.14 11.9 0.9 0.67 9.7 0.9 2.2 1 0 0 1 1 1 0 Ribosomal protein L7/L12 dimerisation domain PhyH PF05721.13 RKO85713.1 - 5e-13 49.8 0.3 5.9e-13 49.6 0.3 1.2 1 0 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) DUF2749 PF10907.8 RKO85714.1 - 0.092 12.9 0.1 0.46 10.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2749) polyprenyl_synt PF00348.17 RKO85719.1 - 3.8e-64 216.2 0.0 4.6e-64 215.9 0.0 1.0 1 0 0 1 1 1 1 Polyprenyl synthetase Chromo PF00385.24 RKO85720.1 - 3.5e-13 49.3 0.7 6.5e-13 48.4 0.7 1.5 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain Tudor-knot PF11717.8 RKO85720.1 - 0.03 14.2 0.0 0.066 13.1 0.0 1.6 2 0 0 2 2 2 0 RNA binding activity-knot of a chromodomain Chromo_shadow PF01393.19 RKO85720.1 - 0.12 12.5 0.0 0.27 11.4 0.0 1.6 2 0 0 2 2 2 0 Chromo shadow domain DUF3060 PF11259.8 RKO85720.1 - 0.21 11.3 0.0 0.33 10.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3060) FHA PF00498.26 RKO85723.1 - 4.7e-07 30.1 0.0 8.9e-07 29.2 0.0 1.5 1 0 0 1 1 1 1 FHA domain PX PF00787.24 RKO85723.1 - 1.1e-06 28.6 0.0 1.9e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 PX domain Med21 PF11221.8 RKO85723.1 - 4.6 7.5 4.6 0.81 9.9 0.1 1.9 2 0 0 2 2 2 0 Subunit 21 of Mediator complex Kinesin PF00225.23 RKO85724.1 - 5.3e-97 324.7 0.0 6.2e-97 324.5 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO85724.1 - 6.4e-20 71.6 0.0 1.1e-19 70.8 0.0 1.4 1 0 0 1 1 1 1 Microtubule binding Coatomer_WDAD PF04053.14 RKO85725.1 - 1.7e-104 350.4 0.1 3.9e-104 349.2 0.0 1.6 2 0 0 2 2 2 1 Coatomer WD associated region WD40 PF00400.32 RKO85725.1 - 1.3e-40 136.6 3.9 6.4e-08 33.1 0.1 7.7 7 0 0 7 7 7 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO85725.1 - 6e-10 39.3 1.8 0.49 10.7 0.0 6.4 4 2 1 6 6 6 3 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO85725.1 - 0.00037 19.3 1.0 8.1 5.0 0.1 4.0 1 1 2 4 4 4 3 Nucleoporin Nup120/160 Ge1_WD40 PF16529.5 RKO85725.1 - 0.00099 18.2 0.0 2.8 6.8 0.0 3.6 3 1 1 4 4 4 2 WD40 region of Ge1, enhancer of mRNA-decapping protein BBS2_Mid PF14783.6 RKO85725.1 - 0.0014 18.7 0.1 3.1 7.9 0.0 3.7 2 2 1 3 3 3 2 Ciliary BBSome complex subunit 2, middle region Integrin_beta PF00362.18 RKO85726.1 - 0.14 11.8 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 Integrin beta chain VWA domain Pkinase PF00069.25 RKO85727.1 - 1.6e-17 63.7 0.0 1.9e-17 63.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO85727.1 - 9.3e-08 31.7 0.0 1e-07 31.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase KA1 PF02149.19 RKO85728.1 - 4.1e-08 32.9 0.0 6.3e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 Kinase associated domain 1 NAF PF03822.14 RKO85728.1 - 0.049 13.8 0.1 0.18 12.0 0.0 1.8 2 0 0 2 2 2 0 NAF domain Tail_P2_I PF09684.10 RKO85728.1 - 0.13 12.2 0.1 0.33 10.9 0.1 1.8 1 1 0 1 1 1 0 Phage tail protein (Tail_P2_I) PRK PF00485.18 RKO85729.1 - 4.7e-36 124.4 0.0 2.4e-35 122.1 0.0 1.9 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family UPRTase PF14681.6 RKO85729.1 - 0.00012 21.6 0.1 0.00023 20.7 0.1 1.5 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase CPT PF07931.12 RKO85729.1 - 0.0023 17.8 0.0 0.0042 16.9 0.0 1.5 1 1 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein AAA_33 PF13671.6 RKO85729.1 - 0.029 14.5 0.0 0.057 13.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain PfkB PF00294.24 RKO85730.1 - 2.7e-25 89.3 0.0 2.9e-24 85.9 0.0 2.1 1 1 0 1 1 1 1 pfkB family carbohydrate kinase Ribosomal_L6 PF00347.23 RKO85733.1 - 6.1e-26 90.9 4.4 2.4e-13 50.5 0.4 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 Peptidase_M10_C PF08548.11 RKO85733.1 - 0.04 13.8 0.1 0.06 13.2 0.1 1.2 1 0 0 1 1 1 0 Peptidase M10 serralysin C terminal MMS22L_N PF14910.6 RKO85733.1 - 0.081 11.3 0.0 0.11 11.0 0.0 1.2 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal Herpes_ori_bp PF02399.15 RKO85737.1 - 1.2e-06 26.9 0.1 2.3e-06 26.0 0.1 1.3 1 0 0 1 1 1 1 Origin of replication binding protein HP0268 PF18618.1 RKO85737.1 - 0.11 12.9 2.0 0.57 10.6 0.1 2.7 2 0 0 2 2 2 0 HP0268 RRM_1 PF00076.22 RKO85738.1 - 2.2e-08 33.8 0.0 0.13 12.1 0.0 4.2 4 0 0 4 4 4 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 RKO85738.1 - 0.0067 16.5 0.2 0.29 11.2 0.0 2.5 2 0 0 2 2 2 1 Limkain b1 CHASE8 PF17152.4 RKO85738.1 - 0.18 12.1 2.7 1 9.6 0.7 2.7 3 0 0 3 3 3 0 Periplasmic sensor domain zf-CCCH PF00642.24 RKO85738.1 - 1 9.3 3.0 0.37 10.8 0.4 1.7 2 0 0 2 2 2 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 RKO85738.1 - 1.3 9.1 7.1 0.066 13.3 1.3 1.8 2 0 0 2 2 2 0 Zinc finger domain Kelch_6 PF13964.6 RKO85740.1 - 1.3e-09 37.9 6.4 0.00069 19.8 0.0 5.5 5 0 0 5 5 5 2 Kelch motif Kelch_4 PF13418.6 RKO85740.1 - 6.5e-09 35.7 3.7 1.3 9.0 0.0 5.6 5 0 0 5 5 5 3 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO85740.1 - 1.9e-06 27.7 3.8 0.005 16.8 0.0 4.0 4 0 0 4 4 4 2 Kelch motif Kelch_1 PF01344.25 RKO85740.1 - 0.00016 21.2 7.9 1.3 8.7 0.0 5.5 6 0 0 6 6 6 3 Kelch motif Kelch_3 PF13415.6 RKO85740.1 - 0.0017 18.6 12.2 0.063 13.6 0.0 4.8 5 1 1 6 6 6 2 Galactose oxidase, central domain SH3_1 PF00018.28 RKO85740.1 - 0.0094 15.5 0.0 0.018 14.6 0.0 1.5 1 0 0 1 1 1 1 SH3 domain Kelch_2 PF07646.15 RKO85740.1 - 0.037 14.0 0.1 0.037 14.0 0.1 4.1 5 0 0 5 5 5 0 Kelch motif DUF737 PF05300.11 RKO85742.1 - 0.095 13.0 0.4 0.12 12.7 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF737) Myb_DNA-bind_6 PF13921.6 RKO85745.1 - 2.8e-10 40.3 1.2 5.5e-07 29.7 0.0 3.2 1 1 2 3 3 3 3 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 RKO85745.1 - 4e-10 39.7 3.2 0.0068 16.6 0.1 3.5 3 1 0 3 3 3 3 Myb-like DNA-binding domain Cu-oxidase_2 PF07731.14 RKO85746.1 - 1.7e-32 112.0 1.8 1.7e-32 112.0 1.8 2.3 2 2 0 2 2 2 1 Multicopper oxidase Raftlin PF15250.6 RKO85746.1 - 0.44 9.2 6.4 0.54 8.9 6.4 1.1 1 0 0 1 1 1 0 Raftlin Zip PF02535.22 RKO85746.1 - 1.3 8.2 4.7 1.7 7.8 4.7 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Retinal PF15449.6 RKO85746.1 - 1.6 6.4 8.8 2.1 6.0 8.8 1.0 1 0 0 1 1 1 0 Retinal protein Presenilin PF01080.17 RKO85746.1 - 3.1 6.5 8.2 3.9 6.2 8.2 1.1 1 0 0 1 1 1 0 Presenilin TraV PF09676.10 RKO85746.1 - 3.1 8.8 11.1 5.5 8.0 11.1 1.3 1 0 0 1 1 1 0 Type IV conjugative transfer system lipoprotein (TraV) BAF1_ABF1 PF04684.13 RKO85747.1 - 0.005 16.0 6.5 0.19 10.8 0.4 2.1 2 0 0 2 2 2 2 BAF1 / ABF1 chromatin reorganising factor Eryth_link_C PF16915.5 RKO85747.1 - 0.013 15.6 0.1 7.3 6.6 0.0 2.4 2 0 0 2 2 2 0 Annelid erythrocruorin linker subunit C-terminus ECH_1 PF00378.20 RKO85747.1 - 0.015 14.7 0.5 9.5 5.5 0.0 3.2 1 1 3 4 4 4 0 Enoyl-CoA hydratase/isomerase HrpF PF06266.12 RKO85747.1 - 0.026 14.8 2.3 6.5 7.1 0.2 2.3 2 0 0 2 2 2 0 HrpF protein Gly-zipper_Omp PF13488.6 RKO85747.1 - 0.03 14.3 0.3 13 5.9 0.0 2.4 2 0 0 2 2 2 0 Glycine zipper NDUFB10 PF10249.9 RKO85747.1 - 0.045 14.3 2.0 7.4 7.1 0.1 2.3 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase subunit 10 DUF4235 PF14019.6 RKO85747.1 - 0.046 13.8 4.7 3 8.0 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4235) CHMI PF02962.15 RKO85747.1 - 0.054 13.8 2.9 6.3 7.1 0.2 2.1 2 0 0 2 2 2 0 5-carboxymethyl-2-hydroxymuconate isomerase DUF4636 PF15468.6 RKO85747.1 - 0.054 13.2 0.0 9.9 5.8 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4636) DUF3870 PF12986.7 RKO85747.1 - 0.09 13.0 1.5 12 6.2 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3870) GIT1_C PF12205.8 RKO85747.1 - 0.099 12.8 4.1 4.6 7.4 0.3 2.5 2 0 0 2 2 2 0 G protein-coupled receptor kinase-interacting protein 1 C term TetR_C_24 PF17932.1 RKO85747.1 - 0.11 12.8 3.6 6.1 7.1 0.2 2.3 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain cwf21 PF08312.12 RKO85747.1 - 0.15 12.3 4.5 4.3 7.6 0.0 3.0 3 1 0 3 3 3 0 cwf21 domain ARGLU PF15346.6 RKO85747.1 - 0.19 11.6 13.6 1.6 8.6 3.0 2.4 2 0 0 2 2 2 0 Arginine and glutamate-rich 1 zf-HC2 PF13490.6 RKO85747.1 - 0.25 11.6 3.9 11 6.3 0.3 2.4 2 0 0 2 2 2 0 Putative zinc-finger PreAtp-grasp PF18604.1 RKO85747.1 - 0.98 9.1 4.9 1.9 8.1 0.3 2.1 2 0 0 2 2 2 0 Pre ATP-grasp domain TetR_C_16 PF17920.1 RKO85747.1 - 1.6 9.0 10.2 8.2 6.7 1.7 2.3 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain BMC PF00936.19 RKO85747.1 - 1.7 8.7 9.6 9.8 6.2 1.5 2.7 2 0 0 2 2 2 0 BMC domain Thiolase_N PF00108.23 RKO85749.1 - 3.9e-42 144.4 0.9 5.2e-42 144.0 0.9 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 RKO85749.1 - 3.3e-33 114.0 0.0 5.4e-33 113.3 0.0 1.3 1 0 0 1 1 1 1 Thiolase, C-terminal domain TraC PF07820.12 RKO85750.1 - 0.12 12.7 0.3 0.42 11.0 0.3 1.9 1 0 0 1 1 1 0 TraC-like protein zinc-ribbons_6 PF07191.12 RKO85752.1 - 0.0062 16.5 3.9 0.0062 16.5 3.9 2.4 2 1 0 2 2 2 1 zinc-ribbons FAD_binding_5 PF00941.21 RKO85753.1 - 6.3e-50 169.2 0.0 9.6e-50 168.6 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase Fer2_2 PF01799.20 RKO85753.1 - 5.2e-27 93.7 0.2 5.2e-27 93.7 0.2 2.0 3 0 0 3 3 3 1 [2Fe-2S] binding domain CO_deh_flav_C PF03450.17 RKO85753.1 - 1.1e-06 28.7 0.4 2e-06 27.9 0.4 1.5 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Fer2 PF00111.27 RKO85753.1 - 2.1e-06 27.6 3.2 3.5e-06 26.9 0.9 2.5 3 0 0 3 3 3 1 2Fe-2S iron-sulfur cluster binding domain Esterase PF00756.20 RKO85754.1 - 0.093 12.4 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Putative esterase WW PF00397.26 RKO85755.1 - 1.8e-17 63.1 3.8 1.2e-07 31.7 1.2 2.6 2 0 0 2 2 2 2 WW domain Tmemb_185A PF10269.9 RKO85756.1 - 6.8e-14 52.2 25.4 6.5e-05 22.7 5.5 3.6 3 1 0 4 4 4 3 Transmembrane Fragile-X-F protein DUF2721 PF11026.8 RKO85756.1 - 0.0028 17.5 1.1 0.0028 17.5 1.1 3.8 3 2 1 4 4 4 1 Protein of unknown function (DUF2721) UPF0220 PF05255.11 RKO85756.1 - 0.034 13.7 1.9 0.29 10.7 1.1 2.5 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0220) DUF3043 PF11241.8 RKO85756.1 - 2.9 7.9 10.9 0.18 11.9 1.5 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3043) Pro_isomerase PF00160.21 RKO85758.1 - 1.2e-49 168.6 0.0 1.3e-49 168.5 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Snf7 PF03357.21 RKO85761.1 - 4.5e-23 81.7 4.4 4.5e-23 81.7 4.4 1.7 2 0 0 2 2 2 1 Snf7 Formyl_trans_N PF00551.19 RKO85762.1 - 0.039 13.7 0.1 0.083 12.6 0.1 1.5 1 0 0 1 1 1 0 Formyl transferase Pkinase PF00069.25 RKO85763.1 - 1.3e-20 73.9 0.0 1.6e-20 73.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO85763.1 - 1.3e-07 31.2 0.0 1.5e-07 31.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Lipase_GDSL PF00657.22 RKO85764.1 - 5.8e-12 46.0 0.0 6.8e-12 45.8 0.0 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase Lipase_GDSL_2 PF13472.6 RKO85764.1 - 3.8e-10 40.4 0.0 4.9e-10 40.1 0.0 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family TcpQ PF10671.9 RKO85764.1 - 0.026 14.6 0.0 0.05 13.7 0.0 1.5 1 0 0 1 1 1 0 Toxin co-regulated pilus biosynthesis protein Q Prenyltrans PF00432.21 RKO85766.1 - 3e-31 106.9 17.8 1.3e-15 56.8 0.0 6.3 6 1 0 6 6 6 4 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_C PF13243.6 RKO85766.1 - 0.0017 17.6 0.0 0.0031 16.7 0.0 1.4 1 0 0 1 1 1 1 Squalene-hopene cyclase C-terminal domain SQHop_cyclase_N PF13249.6 RKO85766.1 - 0.0053 15.9 0.0 0.11 11.6 0.0 2.2 1 1 1 2 2 2 1 Squalene-hopene cyclase N-terminal domain KSHV_K8 PF07188.11 RKO85768.1 - 0.032 13.6 0.0 0.062 12.7 0.0 1.5 1 0 0 1 1 1 0 Kaposi's sarcoma-associated herpesvirus (KSHV) K8 protein DUF4637 PF15470.6 RKO85768.1 - 1.6 8.4 6.0 2.8 7.6 6.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) PH_TFIIH PF08567.11 RKO85770.1 - 1.1e-12 48.1 0.0 1.4e-12 47.7 0.0 1.2 1 0 0 1 1 1 1 TFIIH p62 subunit, N-terminal domain BSD PF03909.17 RKO85770.1 - 0.043 13.8 0.0 0.076 13.0 0.0 1.3 1 0 0 1 1 1 0 BSD domain UbiA PF01040.18 RKO85771.1 - 1.6e-57 194.7 21.1 2e-57 194.4 21.1 1.0 1 0 0 1 1 1 1 UbiA prenyltransferase family PH_TFIIH PF08567.11 RKO85772.1 - 3e-11 43.5 0.0 4e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 TFIIH p62 subunit, N-terminal domain BSD PF03909.17 RKO85772.1 - 0.042 13.8 0.0 0.076 13.0 0.0 1.3 1 0 0 1 1 1 0 BSD domain Tyrosinase PF00264.20 RKO85773.1 - 0.00015 22.1 0.1 0.00028 21.3 0.1 1.4 1 0 0 1 1 1 1 Common central domain of tyrosinase PDT PF00800.18 RKO85773.1 - 0.04 13.7 0.0 0.052 13.4 0.0 1.2 1 0 0 1 1 1 0 Prephenate dehydratase CagS PF16707.5 RKO85773.1 - 0.048 13.7 0.0 0.077 13.0 0.0 1.3 1 0 0 1 1 1 0 Cag pathogenicity island protein S of Helicobacter pylori ORMDL PF04061.14 RKO85773.1 - 0.11 12.3 0.2 0.24 11.2 0.2 1.6 1 1 0 1 1 1 0 ORMDL family Tyrosinase PF00264.20 RKO85774.1 - 7.8e-08 32.9 3.1 1.3e-07 32.1 3.1 1.3 1 0 0 1 1 1 1 Common central domain of tyrosinase RIH_assoc PF08454.11 RKO85775.1 - 6.9e-24 83.6 0.2 1.5e-23 82.5 0.2 1.6 1 0 0 1 1 1 1 RyR and IP3R Homology associated Wap1 PF16997.5 RKO85775.1 - 0.036 13.2 0.1 0.059 12.5 0.1 1.2 1 0 0 1 1 1 0 Wap1 domain DUF2157 PF09925.9 RKO85775.1 - 0.11 12.2 0.3 0.3 10.9 0.3 1.6 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) Peptidase_S8 PF00082.22 RKO85777.1 - 1.2e-30 106.8 1.6 1.7e-30 106.4 1.6 1.1 1 0 0 1 1 1 1 Subtilase family PA PF02225.22 RKO85777.1 - 0.015 15.3 0.1 0.015 15.3 0.1 2.1 2 0 0 2 2 2 0 PA domain WW PF00397.26 RKO85778.1 - 2.5e-09 37.1 7.2 2.8e-05 24.1 0.1 2.9 3 0 0 3 3 3 2 WW domain GPS2_interact PF15784.5 RKO85778.1 - 0.011 16.2 5.1 0.011 16.2 5.1 3.6 3 0 0 3 3 3 0 G-protein pathway suppressor 2-interacting domain Nucleo_P87 PF07267.11 RKO85778.1 - 0.49 9.2 10.7 1.4 7.7 10.8 1.6 1 1 1 2 2 2 0 Nucleopolyhedrovirus capsid protein P87 Lge1 PF11488.8 RKO85778.1 - 0.52 10.5 11.2 0.048 13.9 3.1 3.1 3 0 0 3 3 3 0 Transcriptional regulatory protein LGE1 Nucleoplasmin PF03066.15 RKO85778.1 - 1.9 9.1 4.6 1.8 9.1 0.7 3.0 2 1 1 3 3 3 0 Nucleoplasmin/nucleophosmin domain DUF4201 PF13870.6 RKO85778.1 - 6.3 6.5 29.1 2.6 7.7 8.3 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4201) GAS PF13851.6 RKO85778.1 - 8 5.8 36.6 0.27 10.6 6.2 3.5 2 1 0 3 3 3 0 Growth-arrest specific micro-tubule binding GIT_CC PF16559.5 RKO85778.1 - 9.7 6.1 8.6 24 4.9 1.5 3.0 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor PDR_CDR PF06422.12 RKO85779.1 - 1.8e-05 24.5 1.1 2.8e-05 23.9 1.1 1.3 1 0 0 1 1 1 1 CDR ABC transporter DUF16 PF01519.16 RKO85781.1 - 0.0048 17.4 0.7 0.016 15.7 0.7 1.8 1 0 0 1 1 1 1 Protein of unknown function DUF16 DUF2681 PF10883.8 RKO85781.1 - 0.29 11.6 5.8 0.11 12.9 2.7 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2681) CEP209_CC5 PF16574.5 RKO85781.1 - 0.41 10.8 6.8 0.33 11.1 3.8 2.1 1 1 1 2 2 2 0 Coiled-coil region of centrosome protein CE290 Cep57_CLD PF14073.6 RKO85781.1 - 0.46 10.5 10.9 8 6.4 0.4 3.5 2 1 1 3 3 3 0 Centrosome localisation domain of Cep57 CENP-F_leu_zip PF10473.9 RKO85781.1 - 0.66 10.0 9.4 0.44 10.6 6.5 2.1 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Phage-MuB_C PF09077.11 RKO85781.1 - 0.74 9.7 4.9 13 5.8 0.4 2.5 2 0 0 2 2 2 0 Mu B transposition protein, C terminal UPF0242 PF06785.11 RKO85781.1 - 1.1 9.3 6.9 0.61 10.2 4.4 1.8 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DUF724 PF05266.14 RKO85781.1 - 1.2 8.9 5.2 2.6 7.8 5.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF724) HrpB7 PF09486.10 RKO85781.1 - 1.9 8.9 12.9 11 6.4 12.9 2.1 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) DivIC PF04977.15 RKO85781.1 - 6 6.7 9.4 1.2 8.9 3.0 2.6 3 0 0 3 3 3 0 Septum formation initiator UBA PF00627.31 RKO85784.1 - 4.3e-08 32.9 0.1 6.4e-08 32.4 0.1 1.3 1 0 0 1 1 1 1 UBA/TS-N domain DUF1751 PF08551.10 RKO85784.1 - 0.0095 16.5 0.0 0.017 15.7 0.0 1.4 1 0 0 1 1 1 1 Eukaryotic integral membrane protein (DUF1751) UBA_3 PF09288.10 RKO85784.1 - 0.067 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Fungal ubiquitin-associated domain RuvA_C PF07499.13 RKO85784.1 - 0.12 12.8 0.1 0.21 12.1 0.1 1.4 1 0 0 1 1 1 0 RuvA, C-terminal domain UBA_2 PF08587.11 RKO85784.1 - 0.17 12.0 0.0 0.26 11.4 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin associated domain (UBA) AAA_5 PF07728.14 RKO85785.1 - 3.1e-63 211.9 0.0 3e-34 118.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 RKO85785.1 - 0.0077 16.6 1.4 0.39 11.1 0.1 3.0 3 0 0 3 3 3 1 AAA ATPase domain U3_snoRNA_assoc PF08297.11 RKO85785.1 - 0.11 13.2 0.1 0.21 12.3 0.1 1.4 1 0 0 1 1 1 0 U3 snoRNA associated AAA_22 PF13401.6 RKO85785.1 - 0.15 12.4 0.0 0.64 10.3 0.0 2.0 1 0 0 1 1 1 0 AAA domain ABC_membrane PF00664.23 RKO85786.1 - 1.8e-33 116.4 7.6 1.8e-33 116.4 7.6 1.7 2 0 0 2 2 2 1 ABC transporter transmembrane region ABC_tran PF00005.27 RKO85786.1 - 0.00013 22.5 0.0 0.00025 21.5 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_27 PF13514.6 RKO85786.1 - 0.0045 16.6 0.0 0.0092 15.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 RKO85786.1 - 0.0088 16.1 0.0 0.018 15.1 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_23 PF13476.6 RKO85786.1 - 0.017 15.6 0.0 0.017 15.6 0.0 2.1 3 0 0 3 3 3 0 AAA domain ABC_ATPase PF09818.9 RKO85786.1 - 0.018 13.8 0.7 0.03 13.1 0.7 1.2 1 0 0 1 1 1 0 Predicted ATPase of the ABC class AAA_29 PF13555.6 RKO85786.1 - 0.02 14.6 0.1 0.067 12.9 0.1 1.9 1 0 0 1 1 1 0 P-loop containing region of AAA domain PPR PF01535.20 RKO85787.1 - 0.017 15.4 0.3 1.8 9.0 0.0 3.5 3 0 0 3 3 3 0 PPR repeat PPR_long PF17177.4 RKO85787.1 - 0.2 11.0 0.2 40 3.5 0.0 3.5 2 1 2 4 4 4 0 Pentacotripeptide-repeat region of PRORP Mlh1_C PF16413.5 RKO85788.1 - 2.1e-86 289.7 0.4 3.9e-86 288.8 0.0 1.6 2 0 0 2 2 2 1 DNA mismatch repair protein Mlh1 C-terminus DNA_mis_repair PF01119.19 RKO85788.1 - 1.5e-33 115.0 0.0 3.5e-33 113.8 0.0 1.6 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain RXT2_N PF08595.11 RKO85788.1 - 0.074 13.1 0.1 0.16 12.0 0.1 1.5 1 0 0 1 1 1 0 RXT2-like, N-terminal DUF4709 PF15821.5 RKO85792.1 - 4.7e-05 23.6 1.4 4.7e-05 23.6 1.4 2.8 3 0 0 3 3 3 1 Domain of unknown function (DUF4709) DUF3874 PF12990.7 RKO85792.1 - 0.064 13.6 0.3 1.4 9.3 0.1 2.5 2 0 0 2 2 2 0 Domain of unknonw function from B. Theta Gene description (DUF3874) JHY PF15261.6 RKO85792.1 - 0.073 13.8 4.1 6.5 7.5 0.1 3.0 3 0 0 3 3 3 0 Jhy protein Gly_transf_sug PF04488.15 RKO85794.1 - 1e-10 42.1 0.0 1.9e-10 41.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase sugar-binding region containing DXD motif Caps_synth PF05704.12 RKO85794.1 - 0.072 12.5 0.0 0.16 11.3 0.0 1.6 1 1 0 1 1 1 0 Capsular polysaccharide synthesis protein NODP PF07684.12 RKO85794.1 - 0.097 12.8 0.0 0.17 12.0 0.0 1.4 1 0 0 1 1 1 0 NOTCH protein Cpn10 PF00166.21 RKO85795.1 - 1.2e-28 99.0 0.0 1.3e-28 98.9 0.0 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit Herpes_UL36 PF03586.13 RKO85795.1 - 0.059 12.7 0.0 0.067 12.5 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL36 tegument protein Ank_2 PF12796.7 RKO85796.1 - 1.6e-24 86.3 0.1 9.9e-17 61.3 0.0 3.4 2 1 0 3 3 3 2 Ankyrin repeats (3 copies) GDPD PF03009.17 RKO85796.1 - 2.7e-21 76.5 0.0 3.9e-21 75.9 0.0 1.3 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family Ank_4 PF13637.6 RKO85796.1 - 7.6e-21 74.2 3.9 1.2e-06 28.9 0.0 4.9 2 1 3 5 5 5 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO85796.1 - 1.2e-18 66.9 11.5 1.8e-08 34.5 0.2 6.3 4 1 2 6 6 6 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO85796.1 - 2.2e-18 64.4 6.3 0.0039 17.6 0.0 6.6 7 0 0 7 7 7 5 Ankyrin repeat Ank PF00023.30 RKO85796.1 - 1e-17 63.7 9.1 4.9e-05 23.6 0.1 6.0 6 0 0 6 6 6 3 Ankyrin repeat SPX PF03105.19 RKO85796.1 - 9.9e-09 35.6 0.2 9.9e-09 35.6 0.2 1.5 2 0 0 2 2 2 1 SPX domain Pirin PF02678.16 RKO85798.1 - 6.9e-10 38.9 0.0 1.3e-09 38.0 0.0 1.5 1 0 0 1 1 1 1 Pirin TFIIA PF03153.13 RKO85799.1 - 0.13 12.2 5.2 0.2 11.6 5.2 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit BSP_II PF05432.11 RKO85799.1 - 0.28 10.9 13.2 0.047 13.4 6.8 2.1 2 0 0 2 2 2 0 Bone sialoprotein II (BSP-II) YjeF_N PF03853.15 RKO85800.1 - 3.1e-10 40.2 1.4 5.5e-10 39.4 1.4 1.4 1 0 0 1 1 1 1 YjeF-related protein N-terminus FDF PF09532.10 RKO85800.1 - 6.5e-05 23.7 0.1 0.00015 22.6 0.1 1.5 1 0 0 1 1 1 1 FDF domain LSM14 PF12701.7 RKO85800.1 - 0.0017 18.4 0.0 0.039 14.0 0.0 2.2 1 1 0 1 1 1 1 Scd6-like Sm domain Linker_histone PF00538.19 RKO85803.1 - 5.4e-24 84.3 0.3 5.4e-24 84.3 0.3 2.3 2 0 0 2 2 2 1 linker histone H1 and H5 family GREB1 PF15782.5 RKO85803.1 - 1.7 5.7 5.8 1.9 5.5 5.8 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer MA3 PF02847.17 RKO85806.1 - 0.0024 17.9 0.0 0.0083 16.1 0.0 1.9 2 0 0 2 2 2 1 MA3 domain 7tm_1 PF00001.21 RKO85809.1 - 3.6e-10 39.6 0.0 5.6e-10 39.0 0.0 1.3 1 0 0 1 1 1 1 7 transmembrane receptor (rhodopsin family) Glycos_transf_4 PF00953.21 RKO85810.1 - 0.0014 18.6 0.5 0.0021 18.1 0.5 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 4 DUF4360 PF14273.6 RKO85811.1 - 2.6e-15 56.8 0.0 3e-15 56.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4360) Glyco_transf_21 PF13506.6 RKO85812.1 - 0.13 11.7 0.0 16 5.0 0.0 2.3 2 0 0 2 2 2 0 Glycosyl transferase family 21 Ribosomal_S26e PF01283.19 RKO85813.1 - 3.6e-54 181.8 5.8 4.4e-54 181.5 5.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S26e HSA PF07529.13 RKO85816.1 - 7.4e-15 55.0 0.3 1.6e-14 54.0 0.3 1.5 1 0 0 1 1 1 1 HSA Myb_DNA-bind_6 PF13921.6 RKO85816.1 - 4.4e-06 26.9 0.0 1.1e-05 25.6 0.0 1.6 1 0 0 1 1 1 1 Myb-like DNA-binding domain Pkinase PF00069.25 RKO85817.1 - 1.5e-38 132.7 0.1 1.7e-38 132.5 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO85817.1 - 1e-22 80.7 0.2 1.2e-22 80.5 0.2 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 RKO85817.1 - 0.00017 20.7 0.1 0.00021 20.3 0.1 1.3 1 1 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 RKO85817.1 - 0.00067 19.1 0.2 0.0014 18.1 0.2 1.5 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 RKO85817.1 - 0.0015 18.5 0.0 0.002 18.1 0.0 1.3 1 1 0 1 1 1 1 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 RKO85817.1 - 0.013 14.6 0.1 0.019 14.0 0.1 1.3 1 1 0 1 1 1 0 Seadornavirus VP7 RIO1 PF01163.22 RKO85817.1 - 0.014 15.0 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 RIO1 family Kinase-like PF14531.6 RKO85817.1 - 0.021 14.1 0.0 0.024 14.0 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Pkinase PF00069.25 RKO85818.1 - 3.6e-20 72.4 0.0 4e-20 72.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain FUSC_2 PF13515.6 RKO85819.1 - 2.1e-12 47.3 19.1 2.1e-10 40.8 6.7 2.5 2 0 0 2 2 2 2 Fusaric acid resistance protein-like ArAE_2_N PF10337.9 RKO85819.1 - 6.1e-07 28.8 0.0 9.6e-07 28.2 0.0 1.3 1 0 0 1 1 1 1 Putative ER transporter, 6TM, N-terminal ALMT PF11744.8 RKO85819.1 - 1.3e-06 27.5 5.8 9.3e-05 21.4 4.8 2.1 2 0 0 2 2 2 2 Aluminium activated malate transporter FUSC PF04632.12 RKO85819.1 - 1.4 7.4 32.1 0.014 14.0 9.2 3.4 3 1 0 3 3 3 0 Fusaric acid resistance protein family ArAE_1 PF06081.11 RKO85819.1 - 4.8 7.3 6.9 11 6.2 1.9 2.4 2 0 0 2 2 2 0 Aromatic acid exporter family member 1 COG7 PF10191.9 RKO85820.1 - 3.1e-15 55.5 0.0 3.8e-15 55.2 0.0 1.0 1 0 0 1 1 1 1 Golgi complex component 7 (COG7) COG7 PF10191.9 RKO85821.1 - 2.7e-35 121.8 0.0 2.9e-35 121.7 0.0 1.0 1 0 0 1 1 1 1 Golgi complex component 7 (COG7) Myb_DNA-binding PF00249.31 RKO85822.1 - 0.00012 22.2 0.0 0.00034 20.7 0.0 1.7 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO85822.1 - 0.029 14.6 0.0 0.048 13.9 0.0 1.4 1 0 0 1 1 1 0 Myb-like DNA-binding domain tRNA-synt_1c PF00749.21 RKO85823.1 - 1.3e-108 362.6 0.0 1.9e-108 362.1 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA_synt_1c_R1 PF04558.15 RKO85823.1 - 3.3e-49 167.0 0.1 5.5e-49 166.3 0.1 1.4 1 0 0 1 1 1 1 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 tRNA-synt_1c_C PF03950.18 RKO85823.1 - 2.3e-36 125.3 0.0 3.5e-35 121.4 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA_synt_1c_R2 PF04557.15 RKO85823.1 - 6e-16 59.2 3.8 6e-16 59.2 3.8 1.7 2 0 0 2 2 2 1 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 DUF229 PF02995.17 RKO85827.1 - 1.6e-22 79.9 0.0 1.3e-20 73.5 0.0 3.0 1 1 0 1 1 1 1 Protein of unknown function (DUF229) DUF2614 PF11023.8 RKO85827.1 - 0.056 13.5 1.1 0.13 12.4 1.1 1.5 1 0 0 1 1 1 0 Zinc-ribbon containing domain DEC-1_N PF04625.13 RKO85827.1 - 0.61 9.0 3.0 0.87 8.5 3.0 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Ndc1_Nup PF09531.10 RKO85828.1 - 0.085 11.5 6.2 0.12 11.0 6.2 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup RAP1 PF07218.11 RKO85828.1 - 2.6 6.2 10.3 2.8 6.1 10.3 1.2 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) Cation_ATPase_N PF00690.26 RKO85829.1 - 3.1e-08 33.2 0.0 7.3e-08 32.0 0.0 1.6 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus E1-E2_ATPase PF00122.20 RKO85829.1 - 2.3e-06 27.3 0.0 4.6e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 E1-E2 ATPase Abhydrolase_6 PF12697.7 RKO85830.1 - 4.3e-07 30.7 4.0 6.5e-07 30.2 0.1 2.2 2 1 0 2 2 2 1 Alpha/beta hydrolase family UPF0227 PF05728.12 RKO85830.1 - 8.9e-06 25.8 0.0 1.6e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0227) Abhydrolase_1 PF00561.20 RKO85830.1 - 0.0073 16.0 0.2 0.015 15.0 0.2 1.5 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF915 PF06028.11 RKO85830.1 - 0.058 12.7 0.1 0.35 10.2 0.0 1.9 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) Acyl_transf_1 PF00698.21 RKO85830.1 - 0.13 11.8 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 Acyl transferase domain Lipase_3 PF01764.25 RKO85830.1 - 0.15 11.9 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) ATG22 PF11700.8 RKO85830.1 - 0.15 10.6 0.6 0.22 10.1 0.6 1.2 1 0 0 1 1 1 0 Vacuole effluxer Atg22 like ABC2_membrane_3 PF12698.7 RKO85831.1 - 1.1e-09 37.8 14.4 1.1e-09 37.8 14.4 2.4 2 1 0 2 2 2 1 ABC-2 family transporter protein Peptidase_M50B PF13398.6 RKO85831.1 - 0.18 11.5 7.1 0.049 13.3 2.1 2.0 2 0 0 2 2 2 0 Peptidase M50B-like EF-hand_5 PF13202.6 RKO85832.1 - 0.0028 17.1 0.1 0.0048 16.3 0.1 1.4 1 0 0 1 1 1 1 EF hand EF-hand_1 PF00036.32 RKO85832.1 - 0.032 13.8 0.1 0.055 13.0 0.1 1.4 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 RKO85832.1 - 0.037 13.9 0.2 0.059 13.3 0.2 1.3 1 0 0 1 1 1 0 EF-hand domain Glyco_hydro_26 PF02156.15 RKO85832.1 - 0.11 11.9 1.3 1.3 8.4 1.0 1.9 2 0 0 2 2 2 0 Glycosyl hydrolase family 26 PspA_IM30 PF04012.12 RKO85833.1 - 0.0079 15.8 7.8 0.014 15.0 7.8 1.4 1 0 0 1 1 1 1 PspA/IM30 family DCB PF16213.5 RKO85833.1 - 0.058 13.1 1.4 0.3 10.7 0.3 2.3 2 0 0 2 2 2 0 Dimerisation and cyclophilin-binding domain of Mon2 ATF7IP_BD PF16788.5 RKO85833.1 - 4.5 7.3 17.1 15 5.6 17.1 1.9 1 0 0 1 1 1 0 ATF-interacting protein binding domain DUF572 PF04502.13 RKO85833.1 - 7.3 6.1 12.5 1.6 8.3 8.8 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF572) RRM_1 PF00076.22 RKO85835.1 - 4e-29 100.2 0.0 2.1e-16 59.5 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF2457 PF10446.9 RKO85835.1 - 4.1e-06 26.2 9.8 4.1e-06 26.2 9.8 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF2457) RRM_occluded PF16842.5 RKO85835.1 - 0.001 18.9 0.0 0.065 13.1 0.0 2.2 2 0 0 2 2 2 1 Occluded RNA-recognition motif Limkain-b1 PF11608.8 RKO85835.1 - 0.0049 16.9 0.2 2.3 8.4 0.1 2.4 2 0 0 2 2 2 2 Limkain b1 RRM_3 PF08777.11 RKO85835.1 - 0.022 14.8 0.1 0.095 12.8 0.0 1.9 2 0 0 2 2 2 0 RNA binding motif SET_assoc PF11767.8 RKO85835.1 - 0.048 13.3 0.0 0.14 11.8 0.0 1.8 2 0 0 2 2 2 0 Histone lysine methyltransferase SET associated RRM_5 PF13893.6 RKO85835.1 - 0.08 12.5 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RNA_pol_Rpb2_6 PF00562.28 RKO85844.1 - 5.6e-11 42.1 0.2 1.2e-08 34.4 0.0 3.1 2 1 0 3 3 3 3 RNA polymerase Rpb2, domain 6 peroxidase PF00141.23 RKO85846.1 - 2.4e-32 112.5 0.0 3e-32 112.2 0.0 1.1 1 0 0 1 1 1 1 Peroxidase Mucin15 PF15672.5 RKO85847.1 - 0.026 14.0 0.1 0.026 14.0 0.1 2.2 2 0 0 2 2 2 0 Cell-membrane associated Mucin15 TMEM154 PF15102.6 RKO85847.1 - 3.8 7.4 8.7 0.48 10.3 0.1 2.3 2 0 0 2 2 2 0 TMEM154 protein family MGC-24 PF05283.11 RKO85847.1 - 5.1 7.5 26.6 0.96 9.9 6.0 2.6 2 0 0 2 2 2 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin tRNA-synt_1g PF09334.11 RKO85849.1 - 5.3e-98 328.3 1.0 4.7e-97 325.2 1.0 1.9 1 1 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 RKO85849.1 - 2.9e-24 85.3 0.1 1.4e-11 43.4 0.0 2.5 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 RKO85849.1 - 8e-13 48.4 0.0 1.4e-05 24.6 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1d PF00750.19 RKO85849.1 - 0.0023 16.9 0.0 0.0036 16.3 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (R) DUF2889 PF11136.8 RKO85849.1 - 0.047 14.0 0.0 0.087 13.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2889) DNA_ligase_A_N PF04675.14 RKO85850.1 - 1.9e-13 51.1 0.0 2.2e-13 50.9 0.0 1.0 1 0 0 1 1 1 1 DNA ligase N terminus Tetraspanin PF00335.20 RKO85851.1 - 9.6e-11 41.8 0.0 1.2e-10 41.5 0.0 1.1 1 0 0 1 1 1 1 Tetraspanin family DUF4131 PF13567.6 RKO85851.1 - 0.21 11.2 3.0 0.5 10.0 3.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) zf-RING_2 PF13639.6 RKO85852.1 - 2.3e-12 47.1 10.1 3e-12 46.7 10.1 1.2 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 RKO85852.1 - 1.8e-10 40.5 10.8 2.4e-10 40.1 10.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO85852.1 - 1.1e-07 31.6 10.0 1.5e-07 31.2 10.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 RKO85852.1 - 1.2e-07 31.7 9.7 1.7e-06 27.9 3.9 2.2 2 0 0 2 2 2 2 RING-type zinc-finger zf-rbx1 PF12678.7 RKO85852.1 - 2.1e-07 31.1 13.1 2.5e-06 27.7 13.1 2.2 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 RKO85852.1 - 2.5e-07 30.4 5.5 3.3e-07 30.0 5.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 RKO85852.1 - 2.4e-06 27.4 7.6 3.8e-06 26.7 7.6 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 RKO85852.1 - 1.1e-05 25.1 7.3 3.7e-05 23.4 5.9 2.2 2 0 0 2 2 2 1 RING-like zinc finger Prok-RING_4 PF14447.6 RKO85852.1 - 2.1e-05 24.3 10.0 4.9e-05 23.1 3.4 2.2 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-ANAPC11 PF12861.7 RKO85852.1 - 0.00019 21.4 5.6 0.00053 20.0 5.6 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_4 PF15227.6 RKO85852.1 - 0.00041 20.5 5.0 0.0011 19.1 5.1 1.7 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 RKO85852.1 - 0.0035 17.1 6.2 0.006 16.4 6.2 1.4 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-Nse PF11789.8 RKO85852.1 - 0.0072 16.1 7.2 0.011 15.5 7.2 1.3 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Zn-C2H2_12 PF18112.1 RKO85852.1 - 0.0075 16.7 4.9 1.5 9.4 0.1 2.6 3 0 0 3 3 2 2 Autophagy receptor zinc finger-C2H2 domain Rad50_zn_hook PF04423.14 RKO85852.1 - 0.021 14.7 1.1 2.7 7.9 0.2 2.3 2 0 0 2 2 2 0 Rad50 zinc hook motif UBZ_FAAP20 PF15750.5 RKO85852.1 - 0.053 13.5 1.6 2.6 8.1 0.4 2.3 2 0 0 2 2 2 0 Ubiquitin-binding zinc-finger zf-RING_10 PF16685.5 RKO85852.1 - 0.12 12.5 3.4 0.19 11.9 3.4 1.3 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-C2H2_4 PF13894.6 RKO85852.1 - 0.16 12.9 4.0 7.9 7.6 0.1 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger RINGv PF12906.7 RKO85852.1 - 0.23 11.6 7.2 0.94 9.6 7.2 1.9 1 1 0 1 1 1 0 RING-variant domain Zf_RING PF16744.5 RKO85852.1 - 0.28 11.3 5.2 0.32 11.1 2.6 2.0 1 1 1 2 2 2 0 KIAA1045 RING finger FANCL_C PF11793.8 RKO85852.1 - 1.3 9.3 8.3 2.9 8.1 5.3 2.6 1 1 1 2 2 2 0 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 RKO85852.1 - 2.1 8.0 7.8 3.8 7.2 7.8 1.5 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type DUF5318 PF17249.2 RKO85852.1 - 2.9 7.7 4.3 2.7 7.8 0.4 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5318) Ribosomal_S10 PF00338.22 RKO85854.1 - 1.7e-17 63.5 0.0 1.8e-17 63.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e Rho_RNA_bind PF07497.12 RKO85854.1 - 0.18 11.7 0.0 0.26 11.2 0.0 1.2 1 0 0 1 1 1 0 Rho termination factor, RNA-binding domain MgtE_N PF03448.17 RKO85857.1 - 0.024 15.2 0.2 1.5 9.5 0.1 2.2 1 1 1 2 2 2 0 MgtE intracellular N domain TFIIA PF03153.13 RKO85857.1 - 0.074 13.0 24.1 0.17 11.9 15.0 2.2 2 0 0 2 2 2 0 Transcription factor IIA, alpha/beta subunit DUF4551 PF15087.6 RKO85857.1 - 8.2 5.1 32.3 5.4 5.7 0.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4551) SWI-SNF_Ssr4 PF08549.10 RKO85857.1 - 9.2 4.8 50.6 4.4 5.8 31.7 2.1 2 0 0 2 2 2 0 Fungal domain of unknown function (DUF1750) TIG PF01833.24 RKO85858.1 - 9.4e-09 35.2 0.4 2.3e-08 34.0 0.4 1.6 1 0 0 1 1 1 1 IPT/TIG domain ADH_N PF08240.12 RKO85859.1 - 4.6e-22 78.0 4.3 6.6e-22 77.5 3.2 1.8 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 RKO85859.1 - 9.2e-18 64.5 0.5 1.5e-17 63.8 0.5 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.19 RKO85859.1 - 1.4e-06 27.8 0.0 2.3e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 RKO85859.1 - 1.7e-05 24.2 0.5 2.7e-05 23.6 0.5 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain ADH_zinc_N_2 PF13602.6 RKO85859.1 - 3.6e-05 24.8 0.0 5.7e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase NAD_binding_2 PF03446.15 RKO85859.1 - 0.015 15.5 0.1 0.027 14.7 0.1 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Oxidored_nitro PF00148.19 RKO85859.1 - 0.022 13.5 0.0 0.032 13.0 0.0 1.2 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase ETF PF01012.21 RKO85859.1 - 0.029 14.3 0.9 0.05 13.5 0.9 1.3 1 0 0 1 1 1 0 Electron transfer flavoprotein domain 3HCDH_N PF02737.18 RKO85859.1 - 0.044 13.7 0.2 0.073 13.0 0.2 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 RKO85859.1 - 0.065 14.1 0.2 0.2 12.5 0.1 1.9 3 0 0 3 3 2 0 Oxidoreductase family, NAD-binding Rossmann fold ELFV_dehydrog PF00208.21 RKO85859.1 - 0.12 12.0 0.1 0.21 11.3 0.1 1.4 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Ion_trans PF00520.31 RKO85861.1 - 4.5e-06 26.1 3.8 5.8e-06 25.7 3.8 1.1 1 0 0 1 1 1 1 Ion transport protein DUF3678 PF12435.8 RKO85861.1 - 1 8.8 0.0 1 8.8 0.0 3.1 4 0 0 4 4 4 0 Protein of unknown function (DUF3678) ORC2 PF04084.14 RKO85866.1 - 7.9e-102 340.6 0.0 8.9e-102 340.4 0.0 1.0 1 0 0 1 1 1 1 Origin recognition complex subunit 2 Ribosomal_L6e PF01159.19 RKO85867.1 - 6.9e-39 132.8 0.1 1e-38 132.3 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L6e Beta-Casp PF10996.8 RKO85869.1 - 0.0003 21.0 0.0 0.00066 19.9 0.0 1.5 1 0 0 1 1 1 1 Beta-Casp domain Prok-RING_1 PF14446.6 RKO85873.1 - 0.03 14.2 0.2 0.071 13.1 0.2 1.6 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 CMD PF02627.20 RKO85875.1 - 0.21 11.7 0.0 0.33 11.0 0.0 1.2 1 0 0 1 1 1 0 Carboxymuconolactone decarboxylase family ADH_zinc_N PF00107.26 RKO85876.1 - 9.6e-25 87.1 0.2 1.2e-24 86.7 0.2 1.1 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 RKO85876.1 - 4.7e-19 69.7 0.0 6.6e-19 69.3 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Methyltransf_25 PF13649.6 RKO85876.1 - 0.054 14.2 0.2 0.12 13.1 0.2 1.7 1 1 0 1 1 1 0 Methyltransferase domain PA PF02225.22 RKO85876.1 - 0.058 13.4 0.3 0.19 11.8 0.1 1.9 2 0 0 2 2 2 0 PA domain EIF4E-T PF10477.9 RKO85877.1 - 0.007 15.3 10.6 0.01 14.7 10.6 1.2 1 0 0 1 1 1 1 Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E PAT1 PF09770.9 RKO85877.1 - 0.46 8.7 17.6 0.51 8.6 17.6 1.1 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 Pex14_N PF04695.13 RKO85877.1 - 0.63 10.7 19.7 0.73 10.5 13.3 2.4 2 0 0 2 2 2 0 Peroxisomal membrane anchor protein (Pex14p) conserved region API5 PF05918.11 RKO85877.1 - 0.84 8.4 11.8 1.2 7.9 11.8 1.1 1 0 0 1 1 1 0 Apoptosis inhibitory protein 5 (API5) Presenilin PF01080.17 RKO85877.1 - 0.89 8.3 6.8 1 8.0 6.8 1.2 1 0 0 1 1 1 0 Presenilin DFF-C PF09033.10 RKO85877.1 - 0.96 9.3 14.0 1.6 8.6 14.0 1.3 1 0 0 1 1 1 0 DNA Fragmentation factor 45kDa, C terminal domain DUF1387 PF07139.11 RKO85877.1 - 1 9.0 10.1 1.7 8.3 10.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1387) AF-4 PF05110.13 RKO85877.1 - 1.2 7.2 16.7 1.5 6.9 16.7 1.2 1 0 0 1 1 1 0 AF-4 proto-oncoprotein MMR1 PF08505.10 RKO85877.1 - 2.4 8.4 11.7 3.4 7.9 11.7 1.3 1 1 0 1 1 1 0 Mitochondrial Myo2 receptor-related protein PTPlike_phytase PF14566.6 RKO85877.1 - 4.5 7.4 6.8 9.1 6.4 6.8 1.4 1 0 0 1 1 1 0 Inositol hexakisphosphate DUF4834 PF16118.5 RKO85877.1 - 5.2 8.1 9.8 13 6.8 9.8 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Ephrin PF00812.17 RKO85878.1 - 0.055 13.5 0.0 0.083 12.9 0.0 1.3 1 0 0 1 1 1 0 Ephrin Hid1 PF12722.7 RKO85881.1 - 5.6e-89 299.3 0.0 2.9e-79 267.2 0.0 2.0 1 1 1 2 2 2 2 High-temperature-induced dauer-formation protein Dymeclin PF09742.9 RKO85881.1 - 1.8e-66 224.9 0.0 1.6e-65 221.7 0.0 1.9 1 1 0 1 1 1 1 Dyggve-Melchior-Clausen syndrome protein Tetraspanin PF00335.20 RKO85882.1 - 4.8e-20 72.3 2.7 6.3e-20 71.9 2.7 1.1 1 0 0 1 1 1 1 Tetraspanin family ETRAMP PF09716.10 RKO85882.1 - 1.7 8.7 7.1 8.6 6.5 1.5 2.6 2 1 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) Phage_holin_3_6 PF07332.11 RKO85882.1 - 7.9 6.6 9.1 2.2 8.3 3.8 2.1 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III FMO-like PF00743.19 RKO85883.1 - 6.2e-109 364.8 0.0 6.9e-109 364.7 0.0 1.0 1 0 0 1 1 1 1 Flavin-binding monooxygenase-like Pyr_redox_3 PF13738.6 RKO85883.1 - 3.2e-19 69.3 0.0 3.4e-16 59.4 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 RKO85883.1 - 6.4e-14 51.9 0.0 4.7e-09 35.9 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 RKO85883.1 - 1.1e-09 38.0 0.0 2.6e-08 33.4 0.0 2.1 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_8 PF13450.6 RKO85883.1 - 1.8e-06 28.0 0.1 2.6e-05 24.4 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 RKO85883.1 - 9.3e-06 25.7 1.6 0.35 10.9 0.2 4.2 3 1 0 3 3 3 2 FAD-NAD(P)-binding DAO PF01266.24 RKO85883.1 - 0.011 15.4 0.2 0.56 9.7 0.0 2.6 2 1 1 3 3 3 0 FAD dependent oxidoreductase Pyr_redox PF00070.27 RKO85883.1 - 0.11 13.1 0.0 0.24 12.0 0.0 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 7tm_2 PF00002.24 RKO85885.1 - 0.00015 21.2 10.3 0.00032 20.1 10.3 1.7 1 1 0 1 1 1 1 7 transmembrane receptor (Secretin family) 7tm_1 PF00001.21 RKO85885.1 - 0.0012 18.2 6.1 0.0016 17.8 6.1 1.3 1 0 0 1 1 1 1 7 transmembrane receptor (rhodopsin family) Rad1 PF02144.16 RKO85886.1 - 4e-43 147.5 0.0 4.5e-43 147.3 0.0 1.0 1 0 0 1 1 1 1 Repair protein Rad1/Rec1/Rad17 Dynamin_M PF01031.20 RKO85888.1 - 3.8e-08 32.9 0.0 6.5e-05 22.3 0.0 2.5 1 1 1 2 2 2 2 Dynamin central region Dynamin_N PF00350.23 RKO85888.1 - 0.00084 19.4 1.0 0.5 10.4 0.1 3.5 2 1 1 3 3 3 1 Dynamin family DUF1275 PF06912.11 RKO85889.1 - 9.8e-28 97.4 15.6 1.3e-27 97.0 15.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) Rotamase_3 PF13616.6 RKO85890.1 - 7e-18 65.3 0.1 3.4e-17 63.1 0.1 2.0 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase PF00639.21 RKO85890.1 - 5.4e-14 52.9 0.0 1.1e-13 52.0 0.0 1.5 1 1 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 RKO85890.1 - 0.0083 17.0 0.0 0.015 16.1 0.0 1.4 1 1 0 1 1 1 1 PPIC-type PPIASE domain Transglut_core PF01841.19 RKO85891.1 - 0.00014 22.2 0.0 0.00036 21.0 0.0 1.7 1 1 0 1 1 1 1 Transglutaminase-like superfamily zf-C2H2 PF00096.26 RKO85892.1 - 0.00011 22.4 0.6 0.023 15.1 0.2 2.4 1 1 1 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO85892.1 - 0.063 14.2 1.8 3 8.9 0.6 2.5 2 0 0 2 2 2 0 C2H2-type zinc finger Fer2_2 PF01799.20 RKO85894.1 - 1.8e-16 59.9 0.0 1.8e-16 59.9 0.0 1.8 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 RKO85894.1 - 2.3e-07 30.6 2.5 5.7e-07 29.4 0.9 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain FAA_hydrolase PF01557.18 RKO85895.1 - 7.7e-66 221.9 0.0 8.6e-66 221.7 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family CRAL_TRIO PF00650.20 RKO85896.1 - 1.6e-36 125.5 0.0 5.6e-36 123.7 0.0 1.8 1 1 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_N PF03765.15 RKO85896.1 - 2.9e-07 30.6 0.6 6.5e-07 29.4 0.6 1.6 1 0 0 1 1 1 1 CRAL/TRIO, N-terminal domain CRAL_TRIO_2 PF13716.6 RKO85896.1 - 6.8e-06 26.3 0.0 9.4e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain UPF0047 PF01894.17 RKO85897.1 - 2.3e-29 101.9 0.0 3e-29 101.5 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 Smr PF01713.21 RKO85898.1 - 1.6e-07 31.6 0.0 2.4e-07 31.0 0.0 1.2 1 0 0 1 1 1 1 Smr domain Ribonucleas_3_3 PF14622.6 RKO85901.1 - 3.9e-12 46.4 0.0 5.9e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 Ribonuclease-III-like Ribonuclease_3 PF00636.26 RKO85901.1 - 2.3e-07 31.4 0.0 6.5e-07 29.9 0.0 1.8 1 1 0 1 1 1 1 Ribonuclease III domain dsrm PF00035.26 RKO85901.1 - 5.3e-06 27.0 0.0 9.6e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 Double-stranded RNA binding motif PqiA PF04403.13 RKO85901.1 - 0.044 13.6 0.0 0.072 12.9 0.0 1.3 1 0 0 1 1 1 0 Paraquat-inducible protein A SMP PF04927.12 RKO85903.1 - 0.001 19.5 0.3 0.0012 19.3 0.3 1.2 1 0 0 1 1 1 1 Seed maturation protein Med3 PF11593.8 RKO85904.1 - 1.7 7.8 7.2 2.2 7.4 7.2 1.2 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal Sacchrp_dh_C PF16653.5 RKO85906.1 - 1.9e-85 287.2 0.0 4.8e-85 285.9 0.0 1.6 1 1 0 1 1 1 1 Saccharopine dehydrogenase C-terminal domain Sacchrp_dh_NADP PF03435.18 RKO85906.1 - 1.7e-25 89.8 0.2 2.5e-25 89.2 0.2 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 RKO85906.1 - 5.8e-05 23.1 0.4 9.5e-05 22.4 0.4 1.4 1 0 0 1 1 1 1 NAD(P)H-binding NAD_binding_3 PF03447.16 RKO85906.1 - 0.00027 21.6 0.1 0.00049 20.7 0.1 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 RKO85906.1 - 0.0012 18.9 0.1 0.0033 17.5 0.1 1.7 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase TrkA_N PF02254.18 RKO85906.1 - 0.0013 19.0 0.7 0.0026 18.0 0.2 1.7 2 0 0 2 2 2 1 TrkA-N domain GFO_IDH_MocA PF01408.22 RKO85906.1 - 0.013 16.4 0.1 0.02 15.7 0.1 1.4 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_7 PF13241.6 RKO85906.1 - 0.018 15.5 0.1 0.03 14.7 0.1 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding Semialdhyde_dh PF01118.24 RKO85906.1 - 0.051 14.0 0.0 0.086 13.3 0.0 1.3 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 RKO85906.1 - 0.071 12.4 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Metallophos_3 PF14582.6 RKO85907.1 - 0.1 11.9 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Metallophosphoesterase, calcineurin superfamily Methyltransf_16 PF10294.9 RKO85908.1 - 1.5e-13 50.8 0.0 1.9e-09 37.5 0.0 2.2 2 0 0 2 2 2 2 Lysine methyltransferase Methyltransf_25 PF13649.6 RKO85908.1 - 0.0008 20.1 0.2 0.0065 17.1 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 RKO85908.1 - 0.0038 16.8 0.0 0.0059 16.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 RKO85908.1 - 0.0039 16.8 0.0 0.006 16.2 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 DUF4637 PF15470.6 RKO85908.1 - 0.13 12.0 0.0 0.32 10.7 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Retrotran_gag_2 PF14223.6 RKO85909.1 - 3.8e-06 26.6 0.4 5.2e-06 26.2 0.4 1.2 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type DUF4219 PF13961.6 RKO85909.1 - 0.0004 20.0 0.1 0.00072 19.2 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4219) Retrotran_gag_3 PF14244.6 RKO85909.1 - 0.026 14.3 0.1 0.05 13.4 0.1 1.5 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type gag_pre-integrs PF13976.6 RKO85910.1 - 3.2e-09 36.5 0.2 4.9e-09 35.9 0.2 1.3 1 0 0 1 1 1 1 GAG-pre-integrase domain Dynamin_M PF01031.20 RKO85911.1 - 1.5e-06 27.6 0.0 1.2e-05 24.7 0.0 2.1 1 1 1 2 2 2 1 Dynamin central region GED PF02212.18 RKO85911.1 - 8.9e-06 25.8 0.0 2.1e-05 24.6 0.0 1.7 1 0 0 1 1 1 1 Dynamin GTPase effector domain Dynamin_N PF00350.23 RKO85911.1 - 0.00024 21.2 0.4 0.0073 16.4 0.0 2.5 2 1 1 3 3 3 1 Dynamin family AAA_33 PF13671.6 RKO85911.1 - 0.013 15.6 0.0 1.4 9.1 0.0 3.0 2 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 RKO85911.1 - 0.067 13.6 0.1 0.067 13.6 0.1 2.5 2 2 0 2 2 2 0 AAA ATPase domain ACPS PF01648.20 RKO85912.1 - 9.9e-15 54.7 0.0 1.2e-14 54.4 0.0 1.1 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily EF-hand_1 PF00036.32 RKO85913.1 - 5.2e-43 141.4 13.6 1.5e-10 39.9 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 RKO85913.1 - 1.4e-36 124.7 2.8 8.6e-19 67.8 1.0 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 RKO85913.1 - 9.5e-32 108.6 11.8 4.1e-15 55.4 0.6 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 RKO85913.1 - 2.2e-31 105.1 8.1 1.3e-09 37.2 0.1 4.7 4 2 1 5 5 5 4 EF-hand domain EF-hand_5 PF13202.6 RKO85913.1 - 5.5e-28 95.2 9.7 9.6e-07 28.0 0.1 4.3 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 RKO85913.1 - 2e-16 60.1 0.2 2.3e-09 37.4 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 RKO85913.1 - 2.3e-10 40.3 0.8 4.5e-05 23.4 0.2 2.2 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 RKO85913.1 - 3e-09 37.2 0.0 0.0003 21.1 0.1 2.1 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 RKO85913.1 - 2.6e-06 28.3 0.0 0.001 19.9 0.0 2.1 1 1 1 2 2 2 1 EF-hand domain UPF0154 PF03672.13 RKO85913.1 - 2.6e-06 27.4 2.1 0.042 13.9 0.0 3.6 3 1 1 4 4 4 2 Uncharacterised protein family (UPF0154) Dockerin_1 PF00404.18 RKO85913.1 - 4.6e-05 23.5 3.7 0.019 15.2 0.2 3.1 1 1 2 3 3 3 2 Dockerin type I domain EFhand_Ca_insen PF08726.10 RKO85913.1 - 0.00011 22.2 1.6 0.00043 20.3 0.2 2.3 2 2 0 2 2 2 1 Ca2+ insensitive EF hand DUF4497 PF14924.6 RKO85913.1 - 0.00078 19.9 0.0 0.4 11.2 0.0 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF4497) DUF1103 PF06513.11 RKO85913.1 - 0.00083 19.0 3.0 0.00096 18.8 3.0 1.2 1 0 0 1 1 1 1 Repeat of unknown function (DUF1103) Caleosin PF05042.13 RKO85913.1 - 0.00092 19.2 1.6 0.49 10.3 0.0 3.5 1 1 3 4 4 4 1 Caleosin related protein DUF3349 PF11829.8 RKO85913.1 - 0.00093 19.9 0.5 1.2 10.0 0.0 2.8 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) TerB PF05099.13 RKO85913.1 - 0.0014 18.6 0.5 0.39 10.7 0.0 2.3 1 1 1 2 2 2 2 Tellurite resistance protein TerB Poly_export PF02563.16 RKO85913.1 - 0.002 18.3 0.2 0.67 10.2 0.0 3.2 1 1 2 3 3 3 1 Polysaccharide biosynthesis/export protein RNA_pol_Rpb4 PF03874.16 RKO85913.1 - 0.0025 18.1 0.4 1.8 8.9 0.1 2.7 3 0 0 3 3 3 1 RNA polymerase Rpb4 DUF5580 PF17743.1 RKO85913.1 - 0.0052 15.4 0.0 0.0052 15.4 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5580) MotA_activ PF09114.10 RKO85913.1 - 0.0083 16.2 0.5 0.13 12.4 0.1 2.3 1 1 0 2 2 2 1 Transcription factor MotA, activation domain DUF2267 PF10025.9 RKO85913.1 - 0.02 15.2 0.0 0.098 12.9 0.0 2.0 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) p25-alpha PF05517.12 RKO85913.1 - 0.022 14.9 0.5 4.3 7.5 0.2 2.5 1 1 1 2 2 2 0 p25-alpha dCache_2 PF08269.11 RKO85913.1 - 0.027 13.6 0.3 2.7 7.1 0.1 2.4 1 1 1 2 2 2 0 Cache domain SurA_N_2 PF13623.6 RKO85913.1 - 0.03 14.2 0.9 1.6 8.6 0.2 2.3 1 1 1 2 2 2 0 SurA N-terminal domain DUF1811 PF08838.10 RKO85913.1 - 0.058 13.6 0.1 15 5.9 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1811) Spore_III_AB PF09548.10 RKO85913.1 - 0.07 13.2 0.6 0.14 12.2 0.6 1.6 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) SapB_1 PF05184.15 RKO85913.1 - 0.072 13.1 3.3 27 4.9 0.0 3.8 4 0 0 4 4 4 0 Saposin-like type B, region 1 TetR_C_7 PF14246.6 RKO85913.1 - 0.088 12.8 0.1 6.7 6.8 0.0 2.6 2 1 1 3 3 3 0 AefR-like transcriptional repressor, C-terminal domain Peptidase_M24 PF00557.24 RKO85913.1 - 0.099 12.3 0.2 2.7 7.6 0.1 2.3 1 1 0 2 2 2 0 Metallopeptidase family M24 RuvA_C PF07499.13 RKO85913.1 - 0.17 12.4 0.1 16 6.1 0.1 3.0 3 0 0 3 3 3 0 RuvA, C-terminal domain Ion_trans PF00520.31 RKO85914.1 - 1.2e-13 50.9 8.9 1.5e-13 50.6 8.9 1.0 1 0 0 1 1 1 1 Ion transport protein SPO11_like PF03533.14 RKO85915.1 - 0.094 12.8 0.1 0.85 9.8 0.0 2.4 2 0 0 2 2 2 0 SPO11 homologue Glyoxal_oxid_N PF07250.11 RKO85917.1 - 1.2e-06 27.9 0.1 6.9e-06 25.4 0.0 2.1 3 0 0 3 3 3 1 Glyoxal oxidase N-terminus Metal_resist PF13801.6 RKO85918.1 - 0.00049 20.3 0.5 0.00049 20.3 0.5 2.7 3 1 0 3 3 3 1 Heavy-metal resistance WD40 PF00400.32 RKO85919.1 - 5.6e-17 61.8 7.0 0.001 19.8 0.2 6.6 6 0 0 6 6 6 4 WD domain, G-beta repeat CDC24_OB3 PF17244.2 RKO85921.1 - 0.009 15.7 0.1 0.17 11.5 0.1 2.1 2 0 0 2 2 2 2 Cell division control protein 24, OB domain 3 B9-C2 PF07162.11 RKO85922.1 - 1e-15 58.4 0.0 1.1e-14 55.0 0.0 2.1 1 1 0 1 1 1 1 Ciliary basal body-associated, B9 protein Asp PF00026.23 RKO85923.1 - 1.8e-52 178.8 8.2 2.2e-52 178.4 8.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO85923.1 - 0.00013 22.2 6.9 0.0041 17.4 4.0 2.8 3 1 0 3 3 3 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 RKO85923.1 - 0.00016 21.5 0.0 0.00031 20.6 0.0 1.4 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal gag-asp_proteas PF13975.6 RKO85923.1 - 0.027 15.0 0.2 4.5 7.9 0.1 3.0 3 0 0 3 3 3 0 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 RKO85923.1 - 0.04 14.6 2.2 6 7.6 0.1 2.9 3 0 0 3 3 3 0 Aspartyl protease Lamp PF01299.17 RKO85923.1 - 0.23 11.3 0.0 1 9.2 0.0 2.0 2 1 1 3 3 3 0 Lysosome-associated membrane glycoprotein (Lamp) PPC PF04151.15 RKO85923.1 - 0.6 11.2 11.0 5.9 8.1 0.4 3.4 3 0 0 3 3 3 0 Bacterial pre-peptidase C-terminal domain Abhydrolase_6 PF12697.7 RKO85924.1 - 0.0021 18.7 0.3 0.0031 18.2 0.3 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Cation_efflux PF01545.21 RKO85925.1 - 2.6e-10 40.4 7.6 4.9e-10 39.5 7.6 1.5 1 1 0 1 1 1 1 Cation efflux family Clathrin PF00637.20 RKO85926.1 - 1.5e-05 24.9 0.1 5.4e-05 23.1 0.0 1.8 2 0 0 2 2 2 1 Region in Clathrin and VPS Sugar_tr PF00083.24 RKO85928.1 - 4.9e-49 167.4 18.7 7.8e-49 166.8 18.7 1.3 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 RKO85928.1 - 1.8e-27 96.2 37.1 4.8e-25 88.2 23.5 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 RKO85928.1 - 2.9e-06 26.8 4.1 2.9e-06 26.8 4.1 2.3 2 1 0 2 2 2 1 Uncharacterised MFS-type transporter YbfB MFS_2 PF13347.6 RKO85928.1 - 4.3e-05 22.3 6.0 4.3e-05 22.3 6.0 2.8 3 0 0 3 3 3 2 MFS/sugar transport protein WD40 PF00400.32 RKO85929.1 - 7e-16 58.3 5.7 0.08 13.8 0.1 6.8 6 0 0 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO85929.1 - 5.5e-05 23.4 0.0 0.41 11.0 0.0 4.6 3 2 2 5 5 5 1 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 RKO85929.1 - 0.00018 21.3 0.2 8.4 6.5 0.0 4.0 4 0 0 4 4 4 2 WD40-like Beta Propeller Repeat PALB2_WD40 PF16756.5 RKO85929.1 - 0.04 12.8 0.0 4.1 6.2 0.0 2.6 2 1 1 3 3 3 0 Partner and localizer of BRCA2 WD40 domain Syntaxin-6_N PF09177.11 RKO85930.1 - 0.011 16.3 0.7 0.036 14.6 0.7 1.9 1 0 0 1 1 1 0 Syntaxin 6, N-terminal KNOX2 PF03791.13 RKO85930.1 - 0.17 11.4 0.1 0.42 10.2 0.1 1.6 1 0 0 1 1 1 0 KNOX2 domain PseudoU_synth_2 PF00849.22 RKO85931.1 - 1.3e-28 100.1 0.0 2.1e-28 99.4 0.0 1.4 1 0 0 1 1 1 1 RNA pseudouridylate synthase Kelch_2 PF07646.15 RKO85932.1 - 1.6e-07 31.0 0.3 0.0019 18.1 0.1 3.5 3 0 0 3 3 3 2 Kelch motif Kelch_1 PF01344.25 RKO85932.1 - 8.3e-05 22.1 6.0 0.049 13.2 0.1 3.7 4 1 0 4 4 4 2 Kelch motif Kelch_5 PF13854.6 RKO85932.1 - 0.00021 21.2 0.2 0.2 11.7 0.0 3.1 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 RKO85932.1 - 0.00031 20.7 6.6 0.0043 17.0 0.1 3.8 3 0 0 3 3 3 1 Galactose oxidase, central domain SH3_1 PF00018.28 RKO85932.1 - 0.0029 17.2 0.1 0.0053 16.3 0.1 1.5 1 0 0 1 1 1 1 SH3 domain SH3_9 PF14604.6 RKO85932.1 - 0.0048 16.7 0.0 0.023 14.5 0.0 2.1 2 0 0 2 2 2 1 Variant SH3 domain Kelch_6 PF13964.6 RKO85932.1 - 0.0048 17.1 14.4 0.03 14.6 0.0 4.6 6 0 0 6 6 6 2 Kelch motif SH3_2 PF07653.17 RKO85932.1 - 0.0088 15.7 0.0 0.02 14.6 0.0 1.6 1 0 0 1 1 1 1 Variant SH3 domain MGC-24 PF05283.11 RKO85932.1 - 0.14 12.6 0.1 0.39 11.2 0.1 1.8 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Kelch_3 PF13415.6 RKO85932.1 - 0.33 11.3 16.4 0.75 10.2 0.7 4.2 3 1 1 4 4 4 0 Galactose oxidase, central domain UBA_2 PF08587.11 RKO85935.1 - 0.044 13.9 2.4 0.28 11.3 1.1 2.5 2 0 0 2 2 2 0 Ubiquitin associated domain (UBA) Syntaxin-18_N PF10496.9 RKO85935.1 - 0.12 12.7 3.0 0.12 12.6 1.5 1.8 2 0 0 2 2 2 0 SNARE-complex protein Syntaxin-18 N-terminus Beta_helix PF13229.6 RKO85937.1 - 1.1e-06 28.6 0.1 3.3e-06 27.1 0.1 1.7 1 1 0 1 1 1 1 Right handed beta helix region SMC_hinge PF06470.13 RKO85939.1 - 6.5e-26 90.9 1.1 3.7e-25 88.5 0.0 2.9 2 1 1 3 3 3 1 SMC proteins Flexible Hinge Domain Filament PF00038.21 RKO85939.1 - 0.0011 18.7 63.4 0.049 13.2 4.9 5.8 3 2 3 6 6 6 5 Intermediate filament protein Tht1 PF04163.12 RKO85939.1 - 0.011 14.5 8.2 0.02 13.6 8.2 1.4 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein Fez1 PF06818.15 RKO85939.1 - 0.015 15.7 17.1 0.015 15.7 17.1 5.3 2 2 3 5 5 5 0 Fez1 DUF4140 PF13600.6 RKO85939.1 - 0.43 11.1 0.0 0.43 11.1 0.0 8.9 4 2 2 6 6 6 0 N-terminal domain of unknown function (DUF4140) NPV_P10 PF05531.12 RKO85939.1 - 1.5 9.3 25.4 4.3 7.9 0.6 7.7 4 3 3 7 7 7 0 Nucleopolyhedrovirus P10 protein ApoC-I PF04691.12 RKO85939.1 - 4.7 7.2 9.2 7.8 6.5 0.6 4.6 6 0 0 6 6 6 0 Apolipoprotein C-I (ApoC-1) TPR_2 PF07719.17 RKO85940.1 - 2.7e-32 108.3 15.7 1.9e-07 30.7 0.4 10.5 10 0 0 10 10 10 6 Tetratricopeptide repeat TPR_1 PF00515.28 RKO85940.1 - 3.9e-32 108.8 7.2 4.6e-07 29.4 0.3 9.5 9 0 0 9 9 9 6 Tetratricopeptide repeat TPR_8 PF13181.6 RKO85940.1 - 2.7e-19 67.7 9.6 3e-06 27.0 0.0 9.4 10 0 0 10 10 9 4 Tetratricopeptide repeat TPR_16 PF13432.6 RKO85940.1 - 1.5e-17 64.0 21.5 0.00017 22.2 0.1 6.8 6 1 1 7 7 7 4 Tetratricopeptide repeat TPR_19 PF14559.6 RKO85940.1 - 4e-17 62.5 16.2 0.00053 20.4 1.0 6.2 5 2 0 5 5 5 4 Tetratricopeptide repeat TPR_11 PF13414.6 RKO85940.1 - 1.8e-15 56.3 14.9 0.0001 21.9 0.3 9.0 10 1 1 11 11 11 4 TPR repeat TPR_9 PF13371.6 RKO85940.1 - 1.3e-14 54.1 18.8 1.1e-06 28.7 0.2 6.1 5 2 1 6 6 6 4 Tetratricopeptide repeat TPR_14 PF13428.6 RKO85940.1 - 2.3e-14 52.9 28.4 3.3e-05 24.3 0.6 8.6 6 3 4 10 10 9 3 Tetratricopeptide repeat TPR_17 PF13431.6 RKO85940.1 - 2.4e-14 52.6 4.7 5.5e-05 23.3 0.0 7.4 9 0 0 9 9 6 3 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO85940.1 - 1.4e-12 47.6 8.6 0.00023 21.3 0.4 6.0 4 2 2 6 6 6 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_12 PF13424.6 RKO85940.1 - 2.6e-11 43.6 23.9 0.012 15.9 0.1 7.3 6 3 1 8 8 6 3 Tetratricopeptide repeat TPR_15 PF13429.6 RKO85940.1 - 1.1e-06 28.1 6.2 0.00087 18.6 0.1 4.4 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_20 PF14561.6 RKO85940.1 - 1e-05 25.8 5.4 0.87 10.0 0.0 4.7 5 1 0 5 5 5 2 Tetratricopeptide repeat TPR_6 PF13174.6 RKO85940.1 - 1.8e-05 25.1 13.5 0.069 13.8 0.1 7.8 10 0 0 10 10 7 1 Tetratricopeptide repeat NARP1 PF12569.8 RKO85940.1 - 0.00012 21.1 0.1 0.71 8.7 0.0 3.0 3 0 0 3 3 3 2 NMDA receptor-regulated protein 1 TPR_10 PF13374.6 RKO85940.1 - 0.15 12.0 15.9 2.2 8.3 0.1 6.7 8 0 0 8 8 8 0 Tetratricopeptide repeat TPR_7 PF13176.6 RKO85940.1 - 0.15 12.1 11.1 23 5.3 0.0 6.3 7 0 0 7 7 6 0 Tetratricopeptide repeat TPR_4 PF07721.14 RKO85940.1 - 0.4 11.4 19.7 10 7.1 0.2 7.3 9 0 0 9 9 7 0 Tetratricopeptide repeat TPR_21 PF09976.9 RKO85940.1 - 2.6 7.7 6.9 17 5.1 0.5 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat-like domain Vps5 PF09325.10 RKO85941.1 - 7.9e-58 195.8 8.3 1.1e-57 195.4 8.3 1.1 1 0 0 1 1 1 1 Vps5 C terminal like Arfaptin PF06456.13 RKO85941.1 - 0.0067 16.0 0.2 0.0067 16.0 0.2 2.0 1 1 0 1 1 1 1 Arfaptin-like domain BAR_3 PF16746.5 RKO85941.1 - 0.0071 16.1 5.5 0.017 14.8 5.4 1.7 1 1 0 1 1 1 1 BAR domain of APPL family Katanin_con80 PF13925.6 RKO85941.1 - 0.014 15.4 0.3 0.46 10.5 0.0 2.3 2 0 0 2 2 2 0 con80 domain of Katanin BAR_3_WASP_bdg PF10456.9 RKO85941.1 - 0.03 13.8 4.1 0.55 9.6 4.1 2.2 1 1 0 1 1 1 0 WASP-binding domain of Sorting nexin protein Nab1 PF04902.12 RKO85941.1 - 0.055 13.9 4.1 0.13 12.7 1.9 2.1 2 0 0 2 2 2 0 Conserved region in Nab1 Flagellin_N PF00669.20 RKO85941.1 - 0.079 13.1 6.2 0.032 14.3 3.5 1.6 2 0 0 2 2 2 0 Bacterial flagellin N-terminal helical region Occludin_ELL PF07303.13 RKO85941.1 - 0.079 13.7 2.6 3.4 8.5 1.8 3.0 2 1 1 3 3 3 0 Occludin homology domain DUF2400 PF09674.10 RKO85941.1 - 0.1 12.6 0.9 0.15 12.1 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2400) DUF2561 PF10812.8 RKO85941.1 - 0.26 11.3 1.1 0.38 10.8 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2561) HAUS6_N PF14661.6 RKO85941.1 - 0.27 10.8 4.6 0.41 10.2 4.6 1.3 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Sec8_exocyst PF04048.14 RKO85941.1 - 0.59 10.0 5.0 3.9 7.3 5.5 1.9 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain DUF5320 PF17253.2 RKO85941.1 - 0.74 10.9 2.0 64 4.7 0.0 2.9 3 0 0 3 3 3 0 Family of unknown function (DUF5320) APG6_N PF17675.1 RKO85941.1 - 2.6 8.6 12.1 54 4.3 0.0 2.3 1 1 0 2 2 2 0 Apg6 coiled-coil region FUSC PF04632.12 RKO85941.1 - 2.8 6.4 6.6 3.6 6.0 6.6 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family MutS_III PF05192.18 RKO85941.1 - 7.2 6.8 7.3 8.9 6.5 6.1 1.6 1 1 1 2 2 2 0 MutS domain III NECFESHC PF16621.5 RKO85942.1 - 0.085 12.8 0.9 0.085 12.8 0.9 2.1 2 1 1 3 3 3 0 SH3 terminal domain of 2nd SH3 on Neutrophil cytosol factor 1 Aminotran_1_2 PF00155.21 RKO85943.1 - 3.8e-39 134.9 0.0 4.2e-39 134.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II SQHop_cyclase_N PF13249.6 RKO85945.1 - 1.5e-32 112.9 0.0 1.8e-32 112.6 0.0 1.0 1 0 0 1 1 1 1 Squalene-hopene cyclase N-terminal domain Prenyltrans PF00432.21 RKO85945.1 - 5e-10 38.9 0.1 9.9e-10 38.0 0.1 1.5 1 0 0 1 1 1 1 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_C PF13243.6 RKO85946.1 - 4.7e-10 39.1 0.1 5.2e-10 38.9 0.1 1.0 1 0 0 1 1 1 1 Squalene-hopene cyclase C-terminal domain Rif1_N PF12231.8 RKO85947.1 - 6e-16 58.4 0.0 5.2e-13 48.7 0.0 3.1 2 1 0 2 2 2 2 Rap1-interacting factor 1 N terminal Fra10Ac1 PF09725.9 RKO85948.1 - 1.3e-13 51.2 0.4 2.2e-13 50.4 0.4 1.4 1 0 0 1 1 1 1 Folate-sensitive fragile site protein Fra10Ac1 SelP_N PF04592.14 RKO85948.1 - 0.0056 16.1 0.8 0.007 15.8 0.8 1.1 1 0 0 1 1 1 1 Selenoprotein P, N terminal region CDC45 PF02724.14 RKO85948.1 - 0.2 9.9 6.6 0.24 9.7 6.6 1.1 1 0 0 1 1 1 0 CDC45-like protein SpoIIIAH PF12685.7 RKO85948.1 - 0.56 10.0 3.4 0.81 9.5 3.4 1.2 1 0 0 1 1 1 0 SpoIIIAH-like protein Atrophin-1 PF03154.15 RKO85948.1 - 2.5 6.3 11.8 3.5 5.8 11.8 1.3 1 0 0 1 1 1 0 Atrophin-1 family DUF4746 PF15928.5 RKO85948.1 - 8.1 5.8 8.4 9.7 5.5 8.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) RabGAP-TBC PF00566.18 RKO85950.1 - 1.5e-23 83.6 0.0 2e-09 37.4 0.0 3.1 3 0 0 3 3 3 3 Rab-GTPase-TBC domain TPT PF03151.16 RKO85953.1 - 1.7e-24 86.7 20.7 1.9e-24 86.5 20.7 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 RKO85953.1 - 0.00056 20.1 13.1 0.00056 20.1 13.1 2.2 2 0 0 2 2 2 2 EamA-like transporter family Plasmo_rep PF12135.8 RKO85955.1 - 0.65 9.6 14.1 24 4.6 0.3 5.3 6 0 0 6 6 6 0 Plasmodium repeat family Cu-binding_MopE PF11617.8 RKO85955.1 - 2.5 8.4 12.2 26 5.1 0.2 4.0 4 0 0 4 4 4 0 Putative metal-binding motif DUF309 PF03745.14 RKO85955.1 - 5.5 6.8 5.0 1.1e+02 2.6 0.1 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF309) DUF4743 PF15916.5 RKO85958.1 - 1.1e-18 67.3 0.0 1.4e-18 67.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4743) NUDIX PF00293.28 RKO85958.1 - 0.00012 22.2 0.0 0.0002 21.4 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain Myb_DNA-binding PF00249.31 RKO85959.1 - 2.8e-05 24.2 0.0 5.1e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO85959.1 - 0.0025 18.0 0.0 0.0049 17.1 0.0 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain ubiquitin PF00240.23 RKO85960.1 - 5.9e-22 77.2 0.0 3.3e-12 46.0 0.0 2.7 2 1 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 RKO85960.1 - 4e-06 26.5 0.0 0.00011 22.0 0.0 2.3 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like Asp PF00026.23 RKO85961.1 - 2.1e-59 201.5 0.1 2.5e-59 201.3 0.1 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 RKO85961.1 - 0.00042 20.1 0.0 0.0013 18.5 0.0 1.9 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 RKO85961.1 - 0.0025 18.4 0.2 0.22 12.2 0.0 2.8 2 1 0 2 2 2 1 Aspartyl protease TAXi_N PF14543.6 RKO85961.1 - 0.014 15.6 8.2 0.3 11.3 1.7 2.7 2 1 1 3 3 3 0 Xylanase inhibitor N-terminal GTP_EFTU PF00009.27 RKO85962.1 - 6.6e-32 110.6 4.5 6e-30 104.2 4.5 2.2 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 RKO85962.1 - 2.5e-09 37.2 0.1 4e-09 36.6 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 RKO85962.1 - 0.00015 21.7 1.4 0.32 10.9 0.1 2.2 1 1 1 2 2 2 2 RsgA GTPase SRPRB PF09439.10 RKO85962.1 - 0.0032 16.9 0.3 0.008 15.6 0.3 1.6 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 RKO85962.1 - 0.0062 16.7 0.0 0.011 15.9 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase IF2_N PF04760.15 RKO85962.1 - 0.0081 16.0 0.0 0.018 14.9 0.0 1.6 1 0 0 1 1 1 1 Translation initiation factor IF-2, N-terminal region FeoB_N PF02421.18 RKO85962.1 - 0.0097 15.4 0.2 0.034 13.7 0.1 1.9 2 1 0 2 2 2 1 Ferrous iron transport protein B Dynamin_N PF00350.23 RKO85962.1 - 0.011 15.8 0.1 2.7 8.0 0.0 2.5 2 1 1 3 3 3 0 Dynamin family Arf PF00025.21 RKO85962.1 - 0.013 14.9 0.0 0.023 14.2 0.0 1.3 1 0 0 1 1 1 0 ADP-ribosylation factor family SIS_2 PF13580.6 RKO85962.1 - 0.022 14.8 0.2 0.062 13.3 0.1 1.8 2 0 0 2 2 2 0 SIS domain Ras PF00071.22 RKO85962.1 - 0.022 14.4 0.0 0.04 13.5 0.0 1.4 1 0 0 1 1 1 0 Ras family PduV-EutP PF10662.9 RKO85962.1 - 0.036 13.8 0.4 0.16 11.8 0.4 2.0 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation Hydrolase_6 PF13344.6 RKO85962.1 - 0.039 14.1 0.0 11 6.2 0.0 2.3 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase zf-MYST PF17772.1 RKO85963.1 - 1.1e-27 95.4 2.9 1.9e-27 94.6 2.9 1.4 1 0 0 1 1 1 1 MYST family zinc finger domain Tudor-knot PF11717.8 RKO85963.1 - 6.4e-16 58.0 0.9 1.4e-15 56.9 0.9 1.6 1 0 0 1 1 1 1 RNA binding activity-knot of a chromodomain Chromo PF00385.24 RKO85963.1 - 0.015 15.2 0.3 0.015 15.2 0.3 2.6 3 0 0 3 3 3 0 Chromo (CHRromatin Organisation MOdifier) domain AAA_16 PF13191.6 RKO85964.1 - 0.0081 16.6 0.0 0.028 14.8 0.0 1.9 1 0 0 1 1 1 1 AAA ATPase domain IGFBP PF00219.18 RKO85965.1 - 1e-05 26.0 11.2 0.13 12.9 0.5 3.2 3 0 0 3 3 3 3 Insulin-like growth factor binding protein SLBB PF10531.9 RKO85965.1 - 5.2e-05 23.0 0.2 5.8 6.9 0.0 3.6 3 0 0 3 3 3 3 SLBB domain Opy2 PF09463.10 RKO85965.1 - 0.013 15.8 9.7 5.4 7.4 0.6 3.7 3 0 0 3 3 3 0 Opy2 protein GerPB PF10803.8 RKO85965.1 - 0.082 13.0 0.1 1e+02 3.1 0.0 3.4 3 0 0 3 3 3 0 Spore germination GerPB SCA7 PF08313.12 RKO85965.1 - 0.14 12.1 10.6 2.2 8.2 0.4 3.1 3 0 0 3 3 3 0 SCA7, zinc-binding domain Gal_mutarotas_2 PF13802.6 RKO85965.1 - 0.17 12.2 0.2 4.4 7.7 0.0 2.6 3 0 0 3 3 3 0 Galactose mutarotase-like Toxin_7 PF05980.12 RKO85965.1 - 0.33 11.3 9.3 2.1 8.7 0.5 3.4 3 0 0 3 3 3 0 Toxin 7 Toxin_20 PF08089.11 RKO85965.1 - 0.45 10.6 4.8 4.1 7.6 0.6 2.6 2 0 0 2 2 2 0 Huwentoxin-II family Hist_deacetyl PF00850.19 RKO85966.1 - 2e-42 145.7 0.0 2.6e-42 145.4 0.0 1.0 1 0 0 1 1 1 1 Histone deacetylase domain RraB PF06877.11 RKO85966.1 - 0.18 12.5 0.1 0.29 11.9 0.1 1.3 1 0 0 1 1 1 0 Regulator of ribonuclease activity B Pkinase PF00069.25 RKO85967.1 - 1.7e-57 194.8 0.0 2e-57 194.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO85967.1 - 1.1e-44 152.6 0.0 1.2e-44 152.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO85967.1 - 1e-05 24.5 0.0 2.1e-05 23.5 0.0 1.4 2 0 0 2 2 2 1 Fungal protein kinase Kinase-like PF14531.6 RKO85967.1 - 0.016 14.5 0.0 0.029 13.7 0.0 1.4 1 1 0 1 1 1 0 Kinase-like Methyltr_RsmB-F PF01189.17 RKO85968.1 - 1.7e-26 93.2 0.0 2.5e-26 92.6 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Bradykinin PF06753.12 RKO85968.1 - 0.59 9.9 2.8 1.3 8.8 2.8 1.5 1 0 0 1 1 1 0 Bradykinin Urease_gamma PF00547.18 RKO85969.1 - 1.2e-09 38.4 0.0 1.3e-09 38.2 0.0 1.1 1 0 0 1 1 1 1 Urease, gamma subunit DUF4256 PF14066.6 RKO85970.1 - 0.12 12.1 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) FAM220 PF15487.6 RKO85970.1 - 8.7 5.9 10.3 3.9 7.0 0.1 2.4 2 0 0 2 2 2 0 FAM220 family PH PF00169.29 RKO85971.1 - 2.5e-10 40.8 0.1 4.2e-10 40.1 0.0 1.4 1 1 0 1 1 1 1 PH domain PH_9 PF15410.6 RKO85971.1 - 1.6e-06 28.5 0.0 7.1e-05 23.2 0.0 2.1 1 1 0 1 1 1 1 Pleckstrin homology domain HapK PF11639.8 RKO85971.1 - 0.014 15.9 0.0 0.023 15.2 0.0 1.4 1 0 0 1 1 1 0 REDY-like protein HapK Peptidase_M1 PF01433.20 RKO85972.1 - 1.8e-71 240.2 0.1 2.8e-71 239.6 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 RKO85972.1 - 1.1e-36 126.7 0.2 2.6e-36 125.5 0.2 1.6 1 1 0 1 1 1 1 Peptidase M1 N-terminal domain DUF3251 PF11622.8 RKO85972.1 - 0.038 13.6 0.0 0.072 12.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3251) Beta-lactamase PF00144.24 RKO85973.1 - 1e-48 166.3 0.3 1.3e-48 166.0 0.3 1.0 1 0 0 1 1 1 1 Beta-lactamase Peptidase_S11 PF00768.20 RKO85973.1 - 0.0081 15.6 0.0 0.013 14.9 0.0 1.3 1 0 0 1 1 1 1 D-alanyl-D-alanine carboxypeptidase Beta-lactamase2 PF13354.6 RKO85973.1 - 0.039 13.5 0.0 0.22 11.1 0.0 2.0 2 0 0 2 2 2 0 Beta-lactamase enzyme family Sel1 PF08238.12 RKO85974.1 - 0.087 13.5 1.4 1.2 9.9 0.0 2.7 3 0 0 3 3 3 0 Sel1 repeat IBR PF01485.21 RKO85976.1 - 7.4e-22 77.4 47.8 2.3e-12 47.0 7.7 4.3 3 1 1 4 4 4 3 IBR domain, a half RING-finger domain zf-C3HC4 PF00097.25 RKO85976.1 - 0.00015 21.6 6.2 0.00015 21.6 6.2 4.2 3 1 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 RKO85976.1 - 0.00045 20.5 8.0 0.00045 20.5 8.0 4.1 2 1 1 3 3 3 1 Ring finger domain zf-RING_UBOX PF13445.6 RKO85976.1 - 0.002 18.1 6.3 0.002 18.1 6.3 3.8 3 2 0 3 3 3 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 RKO85976.1 - 0.011 15.5 5.3 0.011 15.5 5.3 4.3 3 1 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) DUF16 PF01519.16 RKO85977.1 - 0.019 15.5 5.1 0.053 14.0 5.1 1.7 1 0 0 1 1 1 0 Protein of unknown function DUF16 Spc7 PF08317.11 RKO85977.1 - 0.022 13.7 2.5 0.043 12.7 2.5 1.4 1 0 0 1 1 1 0 Spc7 kinetochore protein Phage_HK97_TLTM PF06120.11 RKO85977.1 - 0.12 11.6 3.0 0.38 9.9 1.4 2.2 2 0 0 2 2 2 0 Tail length tape measure protein Dpy-30 PF05186.13 RKO85978.1 - 5.3e-07 29.2 0.0 1.5e-06 27.8 0.0 1.8 1 1 0 1 1 1 1 Dpy-30 motif MCPVI PF02993.14 RKO85978.1 - 0.12 12.2 3.8 0.17 11.7 3.8 1.2 1 0 0 1 1 1 0 Minor capsid protein VI ORC4_C PF14629.6 RKO85982.1 - 1.2e-25 90.2 0.0 1.7e-25 89.7 0.0 1.2 1 0 0 1 1 1 1 Origin recognition complex (ORC) subunit 4 C-terminus AAA_16 PF13191.6 RKO85982.1 - 4.7e-17 62.9 0.3 1.2e-16 61.6 0.3 1.7 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 RKO85982.1 - 6.4e-08 33.0 0.0 1.7e-07 31.6 0.0 1.7 1 1 1 2 2 2 1 AAA domain DUF815 PF05673.13 RKO85982.1 - 6.9e-05 22.1 0.0 0.00016 21.0 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF815) DAP3 PF10236.9 RKO85982.1 - 0.00021 20.6 0.0 0.48 9.5 0.0 2.2 2 0 0 2 2 2 2 Mitochondrial ribosomal death-associated protein 3 NACHT PF05729.12 RKO85982.1 - 0.00062 19.7 0.0 0.0016 18.4 0.0 1.8 1 1 0 1 1 1 1 NACHT domain AAA PF00004.29 RKO85982.1 - 0.0011 19.4 0.0 0.0031 17.9 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 RKO85982.1 - 0.0014 18.2 0.0 0.0029 17.1 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region T2SSE PF00437.20 RKO85982.1 - 0.0021 17.1 0.0 0.0034 16.5 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 RKO85982.1 - 0.0076 16.0 0.0 0.018 14.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ATPase_2 PF01637.18 RKO85982.1 - 0.014 15.3 0.0 0.022 14.7 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_5 PF07728.14 RKO85982.1 - 0.018 15.1 0.0 0.037 14.0 0.0 1.7 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) TrwB_AAD_bind PF10412.9 RKO85982.1 - 0.024 13.6 0.0 0.038 12.9 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_30 PF13604.6 RKO85982.1 - 0.036 13.8 0.0 0.084 12.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain TniB PF05621.11 RKO85982.1 - 0.095 12.1 0.1 0.27 10.6 0.0 1.7 2 0 0 2 2 2 0 Bacterial TniB protein AAA_19 PF13245.6 RKO85982.1 - 0.097 13.0 0.0 0.34 11.2 0.0 2.0 1 1 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 RKO85982.1 - 0.19 11.4 0.0 0.33 10.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Kelch_6 PF13964.6 RKO85983.1 - 9.5e-09 35.2 6.6 0.0079 16.4 0.0 5.8 5 0 0 5 5 5 2 Kelch motif Kelch_5 PF13854.6 RKO85983.1 - 4.4e-08 32.9 2.6 0.059 13.4 0.0 4.4 4 0 0 4 4 4 2 Kelch motif Kelch_4 PF13418.6 RKO85983.1 - 3.6e-06 26.9 16.3 0.00047 20.1 0.1 5.6 5 2 1 6 6 6 3 Galactose oxidase, central domain Kelch_3 PF13415.6 RKO85983.1 - 5.4e-06 26.6 13.6 0.023 15.0 0.1 4.6 3 1 1 4 4 4 3 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO85983.1 - 3.9e-05 23.1 5.9 0.69 9.5 0.1 5.0 4 1 0 4 4 4 2 Kelch motif Kelch_2 PF07646.15 RKO85983.1 - 0.0056 16.6 0.1 2.4 8.3 0.0 3.2 3 0 0 3 3 3 1 Kelch motif DUF4692 PF15763.5 RKO85983.1 - 2.4 8.6 4.7 0.84 10.1 0.3 2.2 2 0 0 2 2 2 0 Regulator of human erythroid cell expansion (RHEX) Zn_ribbon_2 PF12674.7 RKO85984.1 - 0.14 12.9 0.1 0.29 11.8 0.1 1.5 1 0 0 1 1 1 0 Putative zinc ribbon domain Biotin_carb_N PF00289.22 RKO85987.1 - 6.6e-16 58.8 0.1 7.8e-16 58.6 0.1 1.1 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain FAS_N PF17828.1 RKO85988.1 - 4.9e-13 49.2 0.0 9.2e-13 48.3 0.0 1.5 1 0 0 1 1 1 1 N-terminal domain in fatty acid synthase subunit beta SAT PF16073.5 RKO85988.1 - 2.1e-11 44.0 0.1 1.2e-10 41.6 0.0 1.9 2 0 0 2 2 2 1 Starter unit:ACP transacylase in aflatoxin biosynthesis Jnk-SapK_ap_N PF09744.9 RKO85988.1 - 0.13 12.5 0.0 0.6 10.3 0.0 1.9 2 0 0 2 2 2 0 JNK_SAPK-associated protein-1 SNF5 PF04855.12 RKO85990.1 - 1.2e-54 185.6 0.2 1.1e-52 179.2 0.2 2.0 1 1 0 1 1 1 1 SNF5 / SMARCB1 / INI1 XLF PF09302.11 RKO85990.1 - 0.023 14.9 0.0 0.15 12.2 0.0 2.0 1 1 0 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component adh_short PF00106.25 RKO85993.1 - 9.4e-14 51.3 0.0 2.8e-08 33.5 0.0 2.2 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 RKO85993.1 - 2.5e-10 40.3 0.0 0.00056 19.5 0.0 2.1 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase DUF4156 PF13698.6 RKO85993.1 - 0.0025 18.1 0.0 0.0057 17.0 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4156) KH_1 PF00013.29 RKO85994.1 - 8.9e-48 160.0 10.8 3.1e-18 65.3 0.2 3.2 3 0 0 3 3 3 3 KH domain KH_2 PF07650.17 RKO85994.1 - 2.4e-13 49.7 10.7 0.00015 21.5 0.1 3.2 3 0 0 3 3 3 3 KH domain KH_4 PF13083.6 RKO85994.1 - 3.6e-08 33.2 4.6 0.078 12.9 0.0 3.3 3 0 0 3 3 3 3 KH domain MOEP19 PF16005.5 RKO85994.1 - 0.00015 21.7 0.1 0.0013 18.7 0.0 2.2 2 0 0 2 2 2 1 KH-like RNA-binding domain KH_5 PF13184.6 RKO85994.1 - 0.00099 19.1 8.3 1.1 9.4 0.2 3.3 3 0 0 3 3 3 3 NusA-like KH domain NMT1_3 PF16868.5 RKO85994.1 - 0.13 11.7 1.2 3.6 6.9 0.0 2.0 2 0 0 2 2 2 0 NMT1-like family SNAP PF14938.6 RKO85995.1 - 2.3e-08 33.8 0.7 3.1e-08 33.4 0.7 1.2 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP P53_tetramer PF07710.11 RKO85995.1 - 0.014 14.7 0.0 0.021 14.1 0.0 1.3 1 0 0 1 1 1 0 P53 tetramerisation motif NSF PF02071.20 RKO85995.1 - 0.064 14.0 3.8 3.8 8.7 0.1 2.6 2 0 0 2 2 2 0 Aromatic-di-Alanine (AdAR) repeat EAR PF07897.11 RKO85997.1 - 0.17 11.5 0.1 0.22 11.2 0.1 1.2 1 0 0 1 1 1 0 Ethylene-responsive binding factor-associated repression DUF3712 PF12505.8 RKO86000.1 - 4.9e-09 36.5 0.1 1.2e-08 35.3 0.1 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF3712) LEA_2 PF03168.13 RKO86000.1 - 0.0091 16.5 0.1 0.13 12.8 0.1 2.9 3 0 0 3 3 3 1 Late embryogenesis abundant protein Gtr1_RagA PF04670.12 RKO86003.1 - 1.2e-32 113.2 1.0 1.5e-32 112.8 1.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region HSP70 PF00012.20 RKO86004.1 - 2.3e-27 95.5 0.0 3.1e-27 95.0 0.0 1.1 1 0 0 1 1 1 1 Hsp70 protein FGGY_C PF02782.16 RKO86004.1 - 0.02 14.6 0.0 0.033 13.9 0.0 1.3 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain GRAM PF02893.20 RKO86006.1 - 2.1e-07 30.8 0.1 3.2e-07 30.2 0.1 1.3 1 0 0 1 1 1 1 GRAM domain CBS PF00571.28 RKO86007.1 - 1.1e-23 83.4 10.6 2.3e-05 24.7 0.0 5.3 5 0 0 5 5 5 4 CBS domain PB1 PF00564.24 RKO86007.1 - 1e-07 31.8 0.0 5.5e-07 29.4 0.0 2.2 2 0 0 2 2 2 1 PB1 domain Mit_ribos_Mrp51 PF11709.8 RKO86008.1 - 0.00012 21.8 0.2 0.56 9.7 0.1 3.7 3 1 0 3 3 3 3 Mitochondrial ribosomal protein subunit Clathrin PF00637.20 RKO86009.1 - 4.4e-63 211.4 9.9 1.8e-25 89.5 0.3 4.3 4 0 0 4 4 4 3 Region in Clathrin and VPS Clathrin_H_link PF13838.6 RKO86009.1 - 1.2e-29 102.0 0.0 3e-29 100.7 0.0 1.7 1 0 0 1 1 1 1 Clathrin-H-link Clathrin_propel PF01394.20 RKO86009.1 - 2e-18 65.7 0.0 4.6e-06 26.7 0.0 4.0 3 0 0 3 3 3 3 Clathrin propeller repeat Clathrin-link PF09268.10 RKO86009.1 - 1.1e-12 47.0 1.3 2.4e-12 46.0 1.3 1.6 1 0 0 1 1 1 1 Clathrin, heavy-chain linker DnaJ PF00226.31 RKO86011.1 - 6.5e-09 35.8 0.4 1.5e-08 34.6 0.4 1.6 2 0 0 2 2 2 1 DnaJ domain DnaJ_C PF01556.18 RKO86011.1 - 1.8e-06 28.1 0.0 2.6e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain HAD_2 PF13419.6 RKO86012.1 - 0.00078 19.6 1.9 0.0014 18.8 0.2 1.8 1 1 1 2 2 2 1 Haloacid dehalogenase-like hydrolase Acid_PPase PF12689.7 RKO86012.1 - 0.0018 18.2 4.7 0.081 12.8 0.6 2.9 1 1 1 2 2 2 2 Acid Phosphatase HAD_SAK_1 PF10307.9 RKO86012.1 - 0.0091 15.8 0.3 0.019 14.8 0.2 1.4 1 1 0 1 1 1 1 HAD domain family 1 in Swiss Army Knife RNA repair proteins Phage_GP20 PF06810.11 RKO86013.1 - 0.017 14.9 2.8 0.017 14.9 2.8 1.8 2 0 0 2 2 2 0 Phage minor structural protein GP20 DUF4271 PF14093.6 RKO86013.1 - 0.02 14.8 0.1 0.026 14.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) Aminopep PF10023.9 RKO86013.1 - 0.025 13.9 1.7 0.037 13.4 0.3 1.8 1 1 0 1 1 1 0 Putative aminopeptidase Baculo_PEP_C PF04513.12 RKO86013.1 - 0.035 14.2 7.9 0.17 11.9 2.6 2.2 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Tup_N PF08581.10 RKO86013.1 - 0.049 13.9 1.6 0.082 13.2 0.7 1.9 2 0 0 2 2 2 0 Tup N-terminal GFD1 PF17331.2 RKO86013.1 - 0.11 12.7 0.3 0.28 11.4 0.3 1.7 1 0 0 1 1 1 0 GFD1 mRNA transport factor Ank_4 PF13637.6 RKO86014.1 - 1.3e-28 99.0 1.3 3.4e-12 46.6 0.1 3.7 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO86014.1 - 6e-19 67.9 7.0 3.6e-08 33.5 0.1 2.7 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO86014.1 - 1.3e-17 64.1 0.1 1.8e-13 50.9 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 RKO86014.1 - 2.1e-16 59.5 1.4 1.8e-05 25.0 0.0 3.3 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 RKO86014.1 - 9e-13 47.2 0.1 0.00045 20.4 0.0 3.4 3 0 0 3 3 3 2 Ankyrin repeat Raco_middle PF17651.1 RKO86014.1 - 0.083 12.6 0.0 0.11 12.1 0.0 1.3 1 1 0 1 1 1 0 RACo middle region LRR_8 PF13855.6 RKO86014.1 - 0.11 12.3 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Leucine rich repeat Ssu72 PF04722.13 RKO86015.1 - 2.5e-69 232.7 0.0 3e-69 232.4 0.0 1.0 1 0 0 1 1 1 1 Ssu72-like protein Aminotran_5 PF00266.19 RKO86016.1 - 6e-14 51.8 0.0 7.8e-14 51.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 RKO86016.1 - 0.084 12.2 0.0 0.15 11.3 0.0 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 RKO86016.1 - 0.086 12.0 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 Aminotransferase class I and II Cyclin_N PF00134.23 RKO86017.1 - 0.00029 20.6 0.1 0.0051 16.5 0.0 2.1 2 0 0 2 2 2 1 Cyclin, N-terminal domain Cyclin_C PF02984.19 RKO86017.1 - 0.00064 19.8 0.1 0.001 19.1 0.1 1.4 1 1 0 1 1 1 1 Cyclin, C-terminal domain Vwaint PF14624.6 RKO86018.1 - 3.6 7.8 7.7 13 6.1 1.4 2.5 1 1 1 2 2 2 0 VWA / Hh protein intein-like DUF3432 PF11914.8 RKO86018.1 - 4.5 7.6 23.7 7.8 6.8 7.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF3432) tRNA-synt_1g PF09334.11 RKO86019.1 - 3.4e-157 523.2 0.1 3.9e-157 523.0 0.1 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 RKO86019.1 - 9.9e-12 43.9 0.7 4e-06 25.4 0.0 3.4 1 1 1 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 RKO86019.1 - 0.0071 15.7 0.0 0.017 14.5 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain Lustrin_cystein PF14625.6 RKO86020.1 - 0.0035 17.7 0.6 0.0055 17.1 0.6 1.3 1 0 0 1 1 1 1 Lustrin, cysteine-rich repeated domain GREB1 PF15782.5 RKO86021.1 - 0.25 8.4 1.3 0.31 8.1 1.3 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer HAUS2 PF15003.6 RKO86022.1 - 0.0037 17.0 0.5 0.0055 16.5 0.5 1.2 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 2 DUF4407 PF14362.6 RKO86022.1 - 0.042 13.2 2.6 0.047 13.0 2.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1754 PF08555.10 RKO86022.1 - 0.1 13.4 10.7 0.19 12.5 10.7 1.5 1 0 0 1 1 1 0 Eukaryotic family of unknown function (DUF1754) GAGA_bind PF06217.12 RKO86022.1 - 0.16 12.2 3.0 0.17 12.1 3.0 1.1 1 0 0 1 1 1 0 GAGA binding protein-like family eIF3_subunit PF08597.10 RKO86022.1 - 0.44 10.4 17.8 0.56 10.1 17.8 1.1 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit TEX19 PF15553.6 RKO86022.1 - 0.56 10.2 3.0 0.79 9.7 3.0 1.2 1 0 0 1 1 1 0 Testis-expressed protein 19 AP-5_subunit_s1 PF15001.6 RKO86022.1 - 1.3 9.0 4.9 1.8 8.5 4.9 1.1 1 0 0 1 1 1 0 AP-5 complex subunit sigma-1 TMEM214 PF10151.9 RKO86022.1 - 1.4 7.2 4.1 1.6 7.1 4.1 1.0 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator AAA_23 PF13476.6 RKO86022.1 - 4.3 7.8 12.0 5.5 7.4 12.0 1.2 1 0 0 1 1 1 0 AAA domain Presenilin PF01080.17 RKO86022.1 - 4.6 5.9 4.0 5.4 5.7 4.0 1.1 1 0 0 1 1 1 0 Presenilin Atg14 PF10186.9 RKO86022.1 - 5.6 5.9 9.0 6.7 5.7 9.0 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Peptidase_M49 PF03571.15 RKO86024.1 - 1.9e-93 313.8 0.0 4.7e-43 147.4 0.0 3.0 2 1 1 3 3 3 3 Peptidase family M49 NAD_binding_1 PF00175.21 RKO86025.1 - 1.7e-12 48.0 0.0 2.3e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 RKO86025.1 - 0.00099 19.3 0.2 0.26 11.4 0.0 2.2 1 1 0 2 2 2 2 Ferric reductase NAD binding domain DUF455 PF04305.14 RKO86025.1 - 0.08 12.5 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF455) Hydrolase_4 PF12146.8 RKO86028.1 - 0.013 14.7 0.0 0.016 14.5 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 RKO86028.1 - 0.048 13.1 0.0 0.052 13.0 0.0 1.1 1 0 0 1 1 1 0 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 RKO86028.1 - 0.15 11.7 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Rad21_Rec8 PF04824.16 RKO86029.1 - 3.6e-14 51.8 0.0 1e-13 50.3 0.0 1.8 1 0 0 1 1 1 1 Conserved region of Rad21 / Rec8 like protein Skp1 PF01466.19 RKO86029.1 - 0.074 13.2 0.2 0.32 11.1 0.1 2.1 2 0 0 2 2 2 0 Skp1 family, dimerisation domain SMC_ScpA PF02616.14 RKO86029.1 - 0.083 12.8 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 Segregation and condensation protein ScpA FliC_SP PF12613.8 RKO86029.1 - 0.18 12.3 0.2 0.43 11.1 0.2 1.6 1 0 0 1 1 1 0 Flagellin structural protein TBP PF00352.21 RKO86030.1 - 0.062 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Transcription factor TFIID (or TATA-binding protein, TBP) La PF05383.17 RKO86031.1 - 1.9e-14 53.5 0.3 1.3e-10 41.2 0.0 2.4 2 0 0 2 2 2 2 La domain RRM_3 PF08777.11 RKO86031.1 - 4e-10 39.6 0.0 2.3e-06 27.6 0.0 2.3 2 0 0 2 2 2 2 RNA binding motif RRM_1 PF00076.22 RKO86031.1 - 5.2e-08 32.6 0.2 8.1e-05 22.4 0.0 2.4 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GST_C_2 PF13410.6 RKO86034.1 - 3.4e-09 36.6 0.9 6.7e-09 35.7 0.3 1.6 1 1 1 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 RKO86034.1 - 0.0028 18.0 0.0 0.0073 16.7 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 RKO86034.1 - 0.0079 16.4 0.0 0.012 15.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain HlyD PF00529.20 RKO86034.1 - 0.0081 16.0 3.3 0.023 14.6 2.6 2.1 1 1 1 2 2 2 1 HlyD membrane-fusion protein of T1SS Polyketide_cyc2 PF10604.9 RKO86035.1 - 2.5e-13 50.5 0.3 2.9e-13 50.3 0.3 1.0 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 RKO86035.1 - 0.0049 17.1 0.0 0.0072 16.5 0.0 1.3 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Spc7_N PF15402.6 RKO86036.1 - 6.5 4.9 7.4 7.4 4.7 7.4 1.0 1 0 0 1 1 1 0 N-terminus of kinetochore NMS complex subunit Spc7 Carn_acyltransf PF00755.20 RKO86040.1 - 6.4e-186 619.5 0.0 7.2e-186 619.3 0.0 1.0 1 0 0 1 1 1 1 Choline/Carnitine o-acyltransferase RsbRD_N PF14361.6 RKO86040.1 - 0.11 13.2 0.0 0.7 10.6 0.0 2.2 2 0 0 2 2 2 0 RsbT co-antagonist protein rsbRD N-terminal domain HEAT PF02985.22 RKO86042.1 - 2e-06 27.6 0.1 0.041 14.2 0.0 2.9 2 0 0 2 2 2 2 HEAT repeat CAML PF14963.6 RKO86042.1 - 0.32 11.1 5.3 0.71 9.9 5.3 1.5 1 0 0 1 1 1 0 Calcium signal-modulating cyclophilin ligand Cwf_Cwc_15 PF04889.12 RKO86042.1 - 0.82 9.4 11.1 1.4 8.5 11.1 1.3 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Chorion_3 PF05387.11 RKO86042.1 - 1.2 8.7 11.9 2.6 7.6 11.9 1.5 1 0 0 1 1 1 0 Chorion family 3 Kinesin PF00225.23 RKO86043.1 - 9.8e-65 218.7 0.2 1.3e-63 214.9 0.2 2.1 1 1 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO86043.1 - 2.7e-23 82.6 0.0 6.1e-23 81.4 0.0 1.6 1 0 0 1 1 1 1 Microtubule binding HHH_3 PF12836.7 RKO86043.1 - 2.1e-05 24.7 0.0 4.2e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif SLD3 PF08639.10 RKO86043.1 - 0.011 14.6 5.9 0.017 13.9 5.9 1.2 1 0 0 1 1 1 0 DNA replication regulator SLD3 AAA_16 PF13191.6 RKO86043.1 - 0.04 14.3 0.4 0.15 12.4 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain Pkinase PF00069.25 RKO86045.1 - 1.1e-65 221.7 0.0 1.5e-65 221.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO86045.1 - 1.5e-46 158.8 0.0 2.1e-46 158.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase PBD PF00786.28 RKO86045.1 - 2.4e-24 85.5 0.1 5.3e-24 84.3 0.1 1.6 1 0 0 1 1 1 1 P21-Rho-binding domain PH PF00169.29 RKO86045.1 - 5.7e-13 49.3 1.7 1e-12 48.5 1.7 1.4 1 0 0 1 1 1 1 PH domain Kinase-like PF14531.6 RKO86045.1 - 1.1e-07 31.4 0.0 2.5e-07 30.3 0.0 1.6 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 RKO86045.1 - 1.8e-06 27.0 0.0 2.8e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 RKO86045.1 - 0.0005 19.1 0.5 0.00094 18.2 0.5 1.4 1 1 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 RKO86045.1 - 0.0013 18.7 0.1 0.026 14.5 0.2 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family PH_11 PF15413.6 RKO86045.1 - 0.0019 18.6 1.9 0.25 11.8 1.9 2.4 1 1 0 1 1 1 1 Pleckstrin homology domain Seadorna_VP7 PF07387.11 RKO86045.1 - 0.016 14.3 0.2 0.03 13.4 0.2 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 PIP49_C PF12260.8 RKO86045.1 - 0.031 13.9 0.1 0.056 13.1 0.1 1.4 1 0 0 1 1 1 0 Protein-kinase domain of FAM69 Kdo PF06293.14 RKO86045.1 - 0.1 12.0 0.1 0.36 10.2 0.1 1.8 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family PH_9 PF15410.6 RKO86045.1 - 0.21 11.9 0.9 3.7 7.9 0.9 2.3 1 1 0 1 1 1 0 Pleckstrin homology domain Arylesterase PF01731.20 RKO86046.1 - 2.8e-10 40.2 0.1 1.1e-09 38.3 0.0 2.0 2 0 0 2 2 2 1 Arylesterase NHL PF01436.21 RKO86046.1 - 2.8e-07 30.2 0.0 0.3 11.2 0.0 4.2 4 0 0 4 4 4 3 NHL repeat SGL PF08450.12 RKO86046.1 - 0.00034 20.3 0.0 0.00062 19.4 0.0 1.5 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Str_synth PF03088.16 RKO86046.1 - 0.14 12.3 0.0 0.4 10.8 0.0 1.9 2 0 0 2 2 2 0 Strictosidine synthase SNF2_N PF00176.23 RKO86050.1 - 1.5e-30 106.1 0.0 1.7e-30 106.0 0.0 1.0 1 0 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 RKO86050.1 - 0.00063 19.8 0.0 0.00067 19.7 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 RKO86050.1 - 0.0012 18.6 0.0 0.0015 18.3 0.0 1.3 1 1 0 1 1 1 1 SWI2/SNF2 ATPase DEAD PF00270.29 RKO86050.1 - 0.044 13.6 0.0 0.049 13.4 0.0 1.1 1 0 0 1 1 1 0 DEAD/DEAH box helicase NAD_binding_6 PF08030.12 RKO86051.1 - 6.4e-13 49.1 0.0 1.7e-12 47.8 0.0 1.6 1 1 0 1 1 1 1 Ferric reductase NAD binding domain Cu-oxidase_3 PF07732.15 RKO86051.1 - 0.11 12.5 0.1 0.19 11.7 0.1 1.3 1 0 0 1 1 1 0 Multicopper oxidase BDV_P24 PF06595.11 RKO86055.1 - 0.014 15.3 0.3 0.023 14.6 0.3 1.4 1 0 0 1 1 1 0 Borna disease virus P24 protein AIP3 PF03915.13 RKO86055.1 - 0.054 12.6 0.3 0.076 12.1 0.3 1.1 1 0 0 1 1 1 0 Actin interacting protein 3 Phasin_2 PF09361.10 RKO86055.1 - 0.098 12.9 4.3 0.13 12.5 2.9 1.9 2 0 0 2 2 2 0 Phasin protein PRTP PF01366.18 RKO86055.1 - 0.2 9.6 0.8 0.3 9.1 0.8 1.1 1 0 0 1 1 1 0 Herpesvirus processing and transport protein Alanine_zipper PF11839.8 RKO86055.1 - 0.3 11.5 11.8 0.082 13.3 8.7 1.7 2 0 0 2 2 2 0 Alanine-zipper, major outer membrane lipoprotein GREB1 PF15782.5 RKO86056.1 - 5.3 4.0 9.7 6.2 3.8 9.7 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Hid1 PF12722.7 RKO86056.1 - 8.2 4.4 11.1 9.7 4.2 11.1 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein DNApol_Exo PF18136.1 RKO86059.1 - 2.4e-19 69.5 0.0 3.6e-19 69.0 0.0 1.2 1 0 0 1 1 1 1 DNA mitochondrial polymerase exonuclease domain zf-RING_2 PF13639.6 RKO86060.1 - 4.5e-11 42.9 6.5 6.4e-11 42.4 6.5 1.2 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 RKO86060.1 - 1.1e-08 34.7 0.9 2.1e-08 33.7 0.9 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 RKO86060.1 - 4.4e-08 33.3 4.1 6.7e-08 32.7 4.1 1.3 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 RKO86060.1 - 3.2e-07 30.1 6.7 5.1e-07 29.4 6.7 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 RKO86060.1 - 3.5e-06 26.9 5.7 4.6e-05 23.4 1.6 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 RKO86060.1 - 7e-06 26.0 1.5 1.1e-05 25.3 1.5 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 RKO86060.1 - 8e-06 25.7 3.8 1.2e-05 25.2 3.8 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 RKO86060.1 - 9.4e-06 25.4 4.0 1.4e-05 24.8 4.0 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 RKO86060.1 - 7.7e-05 22.5 4.2 0.00013 21.7 4.2 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 RKO86060.1 - 0.00065 19.5 3.1 0.00095 19.0 3.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 RKO86060.1 - 0.001 18.8 3.8 0.002 17.9 3.8 1.5 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 RKO86060.1 - 0.011 15.9 4.3 0.02 15.1 4.3 1.5 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING Zn_ribbon_17 PF17120.5 RKO86060.1 - 0.012 15.2 2.5 0.019 14.6 2.5 1.2 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Mito_fiss_reg PF05308.11 RKO86060.1 - 0.024 14.7 1.8 0.025 14.7 1.8 1.2 1 0 0 1 1 1 0 Mitochondrial fission regulator zf-Nse PF11789.8 RKO86060.1 - 0.081 12.8 1.9 0.13 12.0 1.9 1.3 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit RINGv PF12906.7 RKO86060.1 - 0.094 12.9 2.7 0.15 12.2 2.7 1.4 1 0 0 1 1 1 0 RING-variant domain CAP_N PF01213.19 RKO86060.1 - 0.13 11.7 8.6 0.19 11.2 8.6 1.3 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Totivirus_coat PF05518.11 RKO86060.1 - 1.7 6.6 4.8 2.2 6.3 4.8 1.1 1 0 0 1 1 1 0 Totivirus coat protein FYDLN_acid PF09538.10 RKO86062.1 - 0.72 10.6 18.6 3.8 8.2 10.5 2.8 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) Chorion_2 PF03964.15 RKO86064.1 - 0.23 12.3 0.2 0.23 12.3 0.2 3.5 4 0 0 4 4 4 0 Chorion family 2 RINGv PF12906.7 RKO86065.1 - 0.0098 16.0 1.8 0.032 14.4 1.8 1.9 1 0 0 1 1 1 1 RING-variant domain zinc_ribbon_4 PF13717.6 RKO86065.1 - 0.029 14.3 0.1 0.072 13.0 0.1 1.6 1 0 0 1 1 1 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 RKO86065.1 - 0.11 12.0 3.9 0.25 10.8 0.3 2.7 2 0 0 2 2 2 0 zinc-ribbon domain dsDNA_bind PF01984.20 RKO86066.1 - 2.9e-33 114.5 4.4 3.6e-33 114.2 4.4 1.1 1 0 0 1 1 1 1 Double-stranded DNA-binding domain DUF1768 PF08719.11 RKO86067.1 - 1.7e-31 109.6 0.0 2.2e-31 109.3 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) DUF4210 PF13915.6 RKO86069.1 - 8.1e-30 103.2 0.1 1.4e-29 102.5 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4210) WBP-1 PF11669.8 RKO86070.1 - 5.2 7.8 8.1 9.2 7.0 2.3 2.4 2 0 0 2 2 2 0 WW domain-binding protein 1 Lipase_3 PF01764.25 RKO86071.1 - 2e-29 102.3 0.0 2.6e-29 101.9 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO86071.1 - 8.5e-06 25.5 0.4 4.8e-05 23.0 0.4 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 RKO86071.1 - 0.0051 16.1 0.1 0.011 15.1 0.1 1.5 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Chlorophyllase PF07224.11 RKO86071.1 - 0.043 12.8 0.0 0.065 12.2 0.0 1.3 1 0 0 1 1 1 0 Chlorophyllase Abhydrolase_6 PF12697.7 RKO86071.1 - 0.076 13.6 5.9 0.022 15.3 2.0 1.8 1 1 1 2 2 2 0 Alpha/beta hydrolase family Esterase PF00756.20 RKO86071.1 - 0.14 11.7 0.1 0.23 11.1 0.1 1.3 1 0 0 1 1 1 0 Putative esterase Glyco_hydro_85 PF03644.13 RKO86072.1 - 1.1e-81 274.6 0.0 1.5e-81 274.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 85 DUF5529 PF17669.1 RKO86072.1 - 0.17 11.9 0.5 12 5.9 0.0 2.7 3 0 0 3 3 3 0 Family of unknown function (DUF5529) DUF4472 PF14739.6 RKO86074.1 - 0.072 13.8 5.8 0.23 12.2 1.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4472) DUF4407 PF14362.6 RKO86074.1 - 0.19 11.1 8.8 0.51 9.6 4.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) Seryl_tRNA_N PF02403.22 RKO86074.1 - 2.1 8.6 4.2 11 6.3 0.2 2.6 3 0 0 3 3 3 0 Seryl-tRNA synthetase N-terminal domain FUSC PF04632.12 RKO86074.1 - 2.9 6.3 6.3 4.1 5.8 6.3 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family Podoplanin PF05808.11 RKO86074.1 - 6.6 6.8 5.7 1.1 9.3 1.6 1.9 2 1 0 2 2 2 0 Podoplanin AFG1_ATPase PF03969.16 RKO86075.1 - 0.00026 20.0 0.2 0.00086 18.3 0.2 1.9 1 1 0 1 1 1 1 AFG1-like ATPase Spt46 PF17734.1 RKO86075.1 - 0.051 13.4 2.3 0.076 12.8 2.3 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated protein 46 DUF778 PF05608.12 RKO86076.1 - 0.12 12.8 0.1 0.15 12.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF778) Pkinase PF00069.25 RKO86079.1 - 3.1e-11 43.1 0.0 3.2e-11 43.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO86079.1 - 3.8e-05 23.1 0.0 4e-05 23.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase KA1 PF02149.19 RKO86080.1 - 1.4e-18 66.4 0.0 2.4e-18 65.6 0.0 1.4 1 0 0 1 1 1 1 Kinase associated domain 1 NOGCT PF08155.11 RKO86081.1 - 2.4e-16 59.4 3.7 4.8e-16 58.5 3.7 1.5 1 0 0 1 1 1 1 NOGCT (NUC087) domain YqzL PF14006.6 RKO86084.1 - 1.3 9.4 3.6 2.7 8.4 3.6 1.5 1 0 0 1 1 1 0 YqzL-like protein XPG_N PF00752.17 RKO86085.1 - 9.6e-28 96.6 0.0 1.9e-27 95.7 0.0 1.4 1 0 0 1 1 1 1 XPG N-terminal domain XPG_I PF00867.18 RKO86085.1 - 7.8e-18 64.6 0.1 1.5e-17 63.7 0.1 1.5 1 0 0 1 1 1 1 XPG I-region XPG_I_2 PF12813.7 RKO86085.1 - 1e-06 28.4 0.0 1e-06 28.4 0.0 1.5 2 0 0 2 2 2 1 XPG domain containing REV PF00424.18 RKO86085.1 - 0.00028 20.9 0.2 0.00043 20.3 0.2 1.4 1 0 0 1 1 1 1 REV protein (anti-repression trans-activator protein) TPR_2 PF07719.17 RKO86085.1 - 0.049 13.8 0.0 0.11 12.6 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF150 PF02576.17 RKO86086.1 - 0.085 13.3 0.3 0.28 11.6 0.1 1.9 2 0 0 2 2 2 0 RimP N-terminal domain MutS_IV PF05190.18 RKO86086.1 - 0.097 13.0 0.4 0.3 11.4 0.4 1.8 1 1 1 2 2 2 0 MutS family domain IV Mito_carr PF00153.27 RKO86087.1 - 6.5e-26 90.1 0.6 1.7e-23 82.4 0.0 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein RRM_1 PF00076.22 RKO86088.1 - 7.6e-10 38.5 0.0 0.00069 19.4 0.0 2.6 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-C2H2 PF00096.26 RKO86088.1 - 0.029 14.8 0.4 0.088 13.3 0.4 1.9 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 RKO86088.1 - 0.031 14.6 0.1 0.066 13.5 0.1 1.5 1 0 0 1 1 1 0 Zinc-finger double-stranded RNA-binding zf-C2H2_4 PF13894.6 RKO86088.1 - 0.089 13.7 0.2 0.25 12.3 0.2 1.8 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2_2 PF12756.7 RKO86088.1 - 0.14 12.5 0.3 0.51 10.7 0.4 1.9 2 0 0 2 2 2 0 C2H2 type zinc-finger (2 copies) Aldedh PF00171.22 RKO86090.1 - 3.9e-66 223.5 0.0 4.7e-66 223.2 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Mito_fiss_reg PF05308.11 RKO86091.1 - 0.037 14.1 8.2 0.061 13.4 8.2 1.3 1 0 0 1 1 1 0 Mitochondrial fission regulator CAP_N PF01213.19 RKO86091.1 - 0.28 10.6 13.3 0.39 10.2 13.3 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Zip PF02535.22 RKO86092.1 - 0.32 10.2 0.3 0.34 10.1 0.3 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter RRN3 PF05327.11 RKO86092.1 - 2.2 6.7 4.3 2.9 6.3 4.3 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Sfi1 PF08457.10 RKO86094.1 - 0.00018 20.2 40.7 0.062 11.8 2.8 4.1 2 1 2 4 4 4 4 Sfi1 spindle body protein AP_endonuc_2 PF01261.24 RKO86094.1 - 3.3 7.1 10.2 43 3.4 10.1 2.2 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel Phage_term_smal PF05944.12 RKO86096.1 - 0.055 13.4 0.4 3.6 7.6 0.1 2.4 1 1 1 2 2 2 0 Phage small terminase subunit DDE_Tnp_IS66_C PF13817.6 RKO86096.1 - 0.11 12.7 0.1 4.3 7.6 0.0 2.9 3 0 0 3 3 3 0 IS66 C-terminal element EF-hand_14 PF17959.1 RKO86097.1 - 0.11 12.8 0.2 0.31 11.4 0.2 1.7 1 0 0 1 1 1 0 EF-hand domain ANAPC3 PF12895.7 RKO86098.1 - 2.1e-07 31.0 0.1 3.5e-07 30.4 0.1 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_2 PF07719.17 RKO86098.1 - 6.3e-06 25.9 1.5 0.0015 18.5 0.6 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO86098.1 - 2.4e-05 24.6 0.5 0.00024 21.6 0.1 2.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_1 PF00515.28 RKO86098.1 - 7.3e-05 22.4 0.5 0.01 15.6 0.3 2.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 RKO86098.1 - 0.00015 21.7 2.4 0.027 14.7 0.4 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO86098.1 - 0.0004 21.0 0.8 0.00076 20.1 0.0 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 RKO86098.1 - 0.0013 19.2 0.5 0.22 12.1 0.1 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 RKO86098.1 - 0.0055 16.6 0.1 1.6 8.9 0.0 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO86098.1 - 0.037 14.8 0.0 0.31 12.0 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat PHD PF00628.29 RKO86099.1 - 3.1e-12 46.2 11.8 6.4e-07 29.2 8.1 2.1 1 1 1 2 2 2 2 PHD-finger Rpr2 PF04032.16 RKO86100.1 - 0.071 13.4 0.2 0.13 12.6 0.2 1.6 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain E1-E2_ATPase PF00122.20 RKO86101.1 - 1e-47 162.0 2.4 1e-47 162.0 2.4 1.7 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 RKO86101.1 - 1.5e-13 50.2 0.4 8.3e-13 47.8 0.0 2.3 3 0 0 3 3 3 1 Cation transporter/ATPase, N-terminus Hydrolase PF00702.26 RKO86101.1 - 2.6e-08 34.4 0.0 7.9e-08 32.8 0.0 1.8 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase ABC2_membrane_5 PF13346.6 RKO86101.1 - 0.027 14.0 2.6 0.054 13.0 2.6 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein Glucos_trans_II PF14264.6 RKO86101.1 - 0.037 13.4 0.3 0.068 12.5 0.3 1.4 1 0 0 1 1 1 0 Glucosyl transferase GtrII Meth_synt_1 PF08267.12 RKO86102.1 - 8.5e-122 406.6 0.0 4.6e-116 387.7 0.0 2.7 3 0 0 3 3 3 2 Cobalamin-independent synthase, N-terminal domain Meth_synt_2 PF01717.18 RKO86102.1 - 2e-92 309.9 0.0 6.4e-85 285.3 0.0 2.2 2 0 0 2 2 2 2 Cobalamin-independent synthase, Catalytic domain CNOT1_CAF1_bind PF16415.5 RKO86102.1 - 0.15 11.4 0.0 0.25 10.7 0.0 1.2 1 0 0 1 1 1 0 CCR4-NOT transcription complex subunit 1 CAF1-binding domain AMP-binding PF00501.28 RKO86104.1 - 4.6e-11 42.0 0.1 7.6e-11 41.2 0.1 1.3 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 RKO86104.1 - 4.3e-08 34.0 0.4 0.0034 18.3 0.0 2.8 2 0 0 2 2 2 2 AMP-binding enzyme C-terminal domain PP-binding PF00550.25 RKO86104.1 - 0.0028 18.0 0.0 0.0063 16.8 0.0 1.6 1 0 0 1 1 1 1 Phosphopantetheine attachment site TPR_1 PF00515.28 RKO86105.1 - 2.1e-15 55.8 1.1 4.3e-08 32.7 0.1 2.9 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 RKO86105.1 - 1.8e-13 49.5 0.1 1.5e-05 24.7 0.0 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 RKO86105.1 - 8.3e-11 41.4 4.0 1.9e-05 24.3 1.5 2.7 2 1 1 3 3 3 2 TPR repeat TPR_17 PF13431.6 RKO86105.1 - 1.2e-09 37.8 1.1 0.0014 18.8 0.2 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 RKO86105.1 - 3.2e-07 30.0 0.0 0.02 15.1 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO86105.1 - 1.5e-05 25.6 0.2 1.5e-05 25.6 0.2 2.8 2 1 0 2 2 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO86105.1 - 9.7e-05 22.9 0.1 0.022 15.5 0.0 4.1 3 1 1 4 4 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 RKO86105.1 - 0.00051 19.9 5.4 0.5 10.5 0.1 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO86105.1 - 0.0018 18.8 0.2 0.0018 18.8 0.2 2.5 2 1 0 2 2 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO86105.1 - 0.013 16.1 7.0 0.78 10.5 0.1 3.1 3 0 0 3 3 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 RKO86105.1 - 0.084 13.2 10.9 0.3 11.4 0.1 2.9 2 1 1 3 3 2 0 Tetratricopeptide repeat PPP4R2 PF09184.11 RKO86105.1 - 1.3 8.5 6.4 0.28 10.8 0.2 2.3 2 0 0 2 2 2 0 PPP4R2 Kelch_1 PF01344.25 RKO86106.1 - 1.5e-11 43.7 8.1 0.00023 20.7 0.0 5.4 5 0 0 5 5 5 3 Kelch motif Kelch_3 PF13415.6 RKO86106.1 - 8.9e-11 41.8 17.4 0.0064 16.8 0.0 6.5 6 0 0 6 6 6 3 Galactose oxidase, central domain Kelch_2 PF07646.15 RKO86106.1 - 2.2e-10 40.0 8.8 0.017 15.1 0.0 6.1 6 0 0 6 6 6 3 Kelch motif Kelch_4 PF13418.6 RKO86106.1 - 1.5e-09 37.7 17.0 0.00059 19.8 0.0 5.9 6 0 0 6 6 6 3 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO86106.1 - 1.9e-09 37.5 17.1 0.0019 18.4 0.1 5.5 6 0 0 6 6 6 3 Kelch motif Kelch_5 PF13854.6 RKO86106.1 - 5.1e-09 35.9 8.0 0.098 12.7 0.0 6.1 6 0 0 6 6 6 3 Kelch motif SH3_1 PF00018.28 RKO86106.1 - 4.8e-05 22.9 0.0 9.5e-05 21.9 0.0 1.5 1 0 0 1 1 1 1 SH3 domain SH3_9 PF14604.6 RKO86106.1 - 0.00012 21.9 0.0 0.00028 20.7 0.0 1.7 1 0 0 1 1 1 1 Variant SH3 domain STT3 PF02516.14 RKO86110.1 - 5.6e-131 437.8 37.8 6.2e-131 437.7 37.8 1.0 1 0 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit DUF4231 PF14015.6 RKO86110.1 - 2.4 8.7 7.3 16 6.0 0.1 3.9 3 1 0 3 3 3 0 Protein of unknown function (DUF4231) UL41A PF17591.2 RKO86111.1 - 0.035 14.2 2.0 12 6.0 0.1 3.3 1 1 2 3 3 3 0 Herpesvirus UL41A COesterase PF00135.28 RKO86112.1 - 1.8e-70 238.3 0.3 5e-29 101.6 0.1 3.0 1 1 1 3 3 3 3 Carboxylesterase family Abhydrolase_3 PF07859.13 RKO86112.1 - 0.0022 17.9 2.9 0.047 13.5 0.0 2.3 2 0 0 2 2 2 2 alpha/beta hydrolase fold Pkinase PF00069.25 RKO86113.1 - 8e-70 235.2 0.0 9.1e-70 235.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO86113.1 - 4.4e-44 150.7 0.0 5.1e-44 150.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO86113.1 - 3e-06 26.7 0.0 5.6e-06 25.9 0.0 1.5 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 RKO86113.1 - 1.9e-05 23.6 0.0 2.3e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 RKO86113.1 - 0.00052 19.7 0.0 0.0055 16.3 0.0 2.0 2 0 0 2 2 2 1 RIO1 family APH PF01636.23 RKO86113.1 - 0.052 13.5 0.1 0.14 12.0 0.1 1.7 2 1 0 2 2 2 0 Phosphotransferase enzyme family F-box-like PF12937.7 RKO86115.1 - 5.6e-09 35.8 0.0 1.1e-08 34.8 0.0 1.5 1 0 0 1 1 1 1 F-box-like LRR_4 PF12799.7 RKO86115.1 - 0.0037 17.7 0.0 1.7 9.2 0.0 2.4 2 0 0 2 2 2 2 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 RKO86115.1 - 0.01 15.8 0.3 3.6 7.9 0.0 3.5 3 0 0 3 3 3 0 Leucine Rich repeat DUF2201 PF09967.9 RKO86115.1 - 0.12 12.5 0.0 0.22 11.7 0.0 1.5 1 1 0 1 1 1 0 VWA-like domain (DUF2201) DOMON PF03351.17 RKO86116.1 - 0.00014 22.1 0.0 0.00025 21.2 0.0 1.4 1 0 0 1 1 1 1 DOMON domain Cytochrom_B561 PF03188.16 RKO86116.1 - 0.0032 17.6 0.8 0.0074 16.4 0.8 1.6 1 0 0 1 1 1 1 Eukaryotic cytochrome b561 Abhydrolase_1 PF00561.20 RKO86118.1 - 6.5e-11 42.3 0.0 4.9e-06 26.4 0.0 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 RKO86118.1 - 1.4e-06 27.8 0.0 0.022 14.0 0.0 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO86118.1 - 5e-06 27.3 0.1 5e-06 27.3 0.1 2.2 2 0 0 2 2 2 1 Alpha/beta hydrolase family Thioesterase PF00975.20 RKO86118.1 - 0.00033 20.8 0.0 0.00055 20.1 0.0 1.2 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_4 PF08386.10 RKO86118.1 - 0.05 13.7 0.0 0.096 12.8 0.0 1.4 1 0 0 1 1 1 0 TAP-like protein Ribonuc_red_sm PF00268.21 RKO86120.1 - 2.9e-118 394.4 0.1 3.4e-118 394.1 0.1 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain p450 PF00067.22 RKO86123.1 - 1e-45 156.4 0.0 1.1e-45 156.3 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 BtrH_N PF14399.6 RKO86123.1 - 0.17 12.1 0.0 0.42 10.9 0.0 1.6 2 0 0 2 2 2 0 Butirosin biosynthesis protein H, N-terminal PPTA PF01239.22 RKO86125.1 - 0.06 13.1 2.3 2.7 7.8 0.2 3.1 2 0 0 2 2 2 0 Protein prenyltransferase alpha subunit repeat DUF5593 PF18007.1 RKO86127.1 - 0.05 14.3 0.1 0.1 13.3 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5593) Glyco_transf_22 PF03901.17 RKO86129.1 - 9e-83 278.8 18.0 1.1e-82 278.6 18.0 1.0 1 0 0 1 1 1 1 Alg9-like mannosyltransferase family Abhydrolase_6 PF12697.7 RKO86130.1 - 5.3e-24 86.1 1.4 6.5e-24 85.7 1.4 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 RKO86130.1 - 3.4e-12 46.2 0.0 4.1e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 RKO86130.1 - 1e-08 35.2 0.6 4.1e-08 33.2 0.6 1.9 1 1 0 1 1 1 1 alpha/beta hydrolase fold Thioesterase PF00975.20 RKO86130.1 - 1.8e-07 31.5 0.0 3.6e-07 30.5 0.0 1.5 1 0 0 1 1 1 1 Thioesterase domain PGAP1 PF07819.13 RKO86130.1 - 0.00018 21.3 0.0 0.00027 20.7 0.0 1.2 1 0 0 1 1 1 1 PGAP1-like protein Esterase PF00756.20 RKO86130.1 - 0.0088 15.7 0.0 0.022 14.4 0.0 1.6 1 0 0 1 1 1 1 Putative esterase Ser_hydrolase PF06821.13 RKO86130.1 - 0.014 15.3 0.4 0.057 13.3 0.0 1.9 2 0 0 2 2 2 0 Serine hydrolase DUF900 PF05990.12 RKO86130.1 - 0.033 13.7 0.0 0.048 13.2 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) LCAT PF02450.15 RKO86130.1 - 0.033 13.3 0.0 0.061 12.5 0.0 1.3 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase Chlorophyllase2 PF12740.7 RKO86130.1 - 0.042 12.7 0.0 0.063 12.2 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme Abhydrolase_2 PF02230.16 RKO86130.1 - 0.049 13.4 0.2 0.91 9.3 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Lipase_3 PF01764.25 RKO86130.1 - 0.057 13.3 0.0 0.11 12.3 0.0 1.5 2 0 0 2 2 2 0 Lipase (class 3) Say1_Mug180 PF10340.9 RKO86130.1 - 0.082 11.7 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Steryl acetyl hydrolase Vps53_N PF04100.12 RKO86131.1 - 2.8e-85 286.6 15.3 1.8e-62 211.5 10.7 2.0 1 1 1 2 2 2 2 Vps53-like, N-terminal Vps54_N PF10475.9 RKO86131.1 - 3.1e-10 39.8 7.3 4.7e-10 39.2 7.3 1.2 1 0 0 1 1 1 1 Vacuolar-sorting protein 54, of GARP complex Vps51 PF08700.11 RKO86131.1 - 9.4e-05 22.4 10.6 0.00049 20.1 0.0 3.4 2 1 1 3 3 3 1 Vps51/Vps67 Spc7 PF08317.11 RKO86131.1 - 9.5e-05 21.4 11.7 0.00018 20.5 11.3 1.6 1 1 1 2 2 2 1 Spc7 kinetochore protein NBD94 PF16830.5 RKO86131.1 - 0.00047 20.5 5.2 0.0011 19.3 5.2 1.6 1 0 0 1 1 1 1 Nucleotide-Binding Domain 94 of RH COG5 PF10392.9 RKO86131.1 - 0.00055 20.1 4.2 0.00055 20.1 4.2 1.9 2 0 0 2 2 2 1 Golgi transport complex subunit 5 AAA_13 PF13166.6 RKO86131.1 - 0.0087 14.8 3.1 0.01 14.5 3.1 1.3 1 0 0 1 1 1 1 AAA domain ING PF12998.7 RKO86131.1 - 0.016 15.7 6.4 0.016 15.7 6.4 2.1 3 0 0 3 3 1 0 Inhibitor of growth proteins N-terminal histone-binding Zw10 PF06248.13 RKO86131.1 - 0.018 13.7 7.2 0.028 13.0 7.2 1.3 1 0 0 1 1 1 0 Centromere/kinetochore Zw10 UCH PF00443.29 RKO86131.1 - 0.025 14.1 1.9 0.034 13.6 1.9 1.2 1 0 0 1 1 1 0 Ubiquitin carboxyl-terminal hydrolase CENP-F_leu_zip PF10473.9 RKO86131.1 - 0.034 14.2 9.4 0.05 13.6 8.6 1.7 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GLE1 PF07817.13 RKO86131.1 - 0.037 13.2 3.6 0.063 12.5 3.6 1.5 1 0 0 1 1 1 0 GLE1-like protein Exotox-A_target PF09102.10 RKO86131.1 - 0.044 13.8 0.1 0.095 12.7 0.1 1.5 1 0 0 1 1 1 0 Exotoxin A, targeting Tropomyosin_1 PF12718.7 RKO86131.1 - 0.051 13.7 8.6 0.047 13.9 3.3 2.6 2 1 1 3 3 2 0 Tropomyosin like RecG_N PF17190.4 RKO86131.1 - 0.12 13.1 4.1 0.22 12.3 3.1 1.9 2 0 0 2 2 1 0 RecG N-terminal helical domain V_ATPase_I PF01496.19 RKO86131.1 - 0.13 10.2 4.8 0.17 9.8 4.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Occludin_ELL PF07303.13 RKO86131.1 - 0.13 13.0 8.0 0.95 10.2 2.3 3.5 2 1 2 4 4 4 0 Occludin homology domain COG2 PF06148.11 RKO86131.1 - 0.17 12.0 10.5 2.8 8.1 10.4 2.9 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Cauli_AT PF03233.13 RKO86131.1 - 0.19 11.6 7.4 0.042 13.8 1.2 2.2 1 1 1 2 2 2 0 Aphid transmission protein GAS PF13851.6 RKO86131.1 - 0.23 10.8 13.2 0.22 10.8 9.0 2.2 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF4337 PF14235.6 RKO86131.1 - 0.24 11.5 7.5 0.14 12.2 5.6 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4337) Fib_alpha PF08702.10 RKO86131.1 - 0.29 11.3 9.6 7.6 6.7 6.2 2.6 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Atg14 PF10186.9 RKO86131.1 - 0.3 10.1 7.5 0.39 9.8 7.5 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 GIT1_C PF12205.8 RKO86131.1 - 0.3 11.2 8.2 5.5 7.1 0.0 2.6 1 1 1 2 2 2 0 G protein-coupled receptor kinase-interacting protein 1 C term FlaC_arch PF05377.11 RKO86131.1 - 0.31 11.5 6.4 16 6.0 0.1 3.3 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) Baculo_PEP_C PF04513.12 RKO86131.1 - 0.37 10.8 9.5 0.66 10.0 7.7 2.1 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Allexi_40kDa PF05549.11 RKO86131.1 - 0.5 9.8 6.1 1.1 8.7 5.8 1.7 1 1 0 1 1 1 0 Allexivirus 40kDa protein DUF1664 PF07889.12 RKO86131.1 - 0.7 9.9 9.5 2.9 7.9 8.3 2.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) GrpE PF01025.19 RKO86131.1 - 0.82 9.3 10.7 17 5.0 10.1 2.5 1 1 0 1 1 1 0 GrpE TMF_DNA_bd PF12329.8 RKO86131.1 - 0.84 9.7 11.3 3 7.9 6.9 2.9 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding YabA PF06156.13 RKO86131.1 - 0.85 10.3 8.7 0.95 10.1 5.3 2.5 1 1 1 2 2 2 0 Initiation control protein YabA Sec34 PF04136.15 RKO86131.1 - 0.9 9.4 8.1 0.25 11.2 2.8 2.4 2 1 0 3 3 2 0 Sec34-like family STAT_alpha PF01017.20 RKO86131.1 - 1 9.2 13.4 0.69 9.8 7.4 2.3 1 1 1 2 2 2 0 STAT protein, all-alpha domain FIVAR PF07554.13 RKO86131.1 - 1 10.2 9.5 0.33 11.7 3.0 3.0 3 1 0 3 3 3 0 FIVAR domain CREPT PF16566.5 RKO86131.1 - 1.4 9.1 9.8 3.1 8.0 7.3 2.4 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour UPF0515 PF15135.6 RKO86131.1 - 1.4 8.2 3.5 2.1 7.6 3.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein UPF0515 DUF2203 PF09969.9 RKO86131.1 - 1.6 9.4 9.3 9.6 7.0 4.3 2.8 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) APG6_N PF17675.1 RKO86131.1 - 1.9 9.0 9.9 3.4 8.2 9.0 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region Sigma70_ner PF04546.13 RKO86131.1 - 2.2 8.1 11.8 1.4 8.8 5.8 2.2 1 1 1 2 2 2 0 Sigma-70, non-essential region Exonuc_VII_L PF02601.15 RKO86131.1 - 2.7 7.5 12.1 5 6.6 12.2 1.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit XhlA PF10779.9 RKO86131.1 - 2.7 8.3 9.1 6.8 7.0 5.9 2.6 2 0 0 2 2 2 0 Haemolysin XhlA DUF948 PF06103.11 RKO86131.1 - 2.8 8.2 8.1 59 4.0 6.7 3.1 2 1 0 2 2 1 0 Bacterial protein of unknown function (DUF948) DUF16 PF01519.16 RKO86131.1 - 3.2 8.3 11.7 9.4 6.8 8.7 2.5 1 1 1 2 2 2 0 Protein of unknown function DUF16 Prp18 PF02840.15 RKO86131.1 - 3.8 7.6 8.6 32 4.6 6.5 2.6 2 1 0 2 2 1 0 Prp18 domain DUF4404 PF14357.6 RKO86131.1 - 4.5 8.0 14.7 3.5 8.3 4.1 4.0 4 1 2 6 6 4 0 Domain of unknown function (DUF4404) Med9 PF07544.13 RKO86131.1 - 5 7.3 11.9 44 4.3 8.0 3.1 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 NPV_P10 PF05531.12 RKO86131.1 - 5 7.7 14.1 0.88 10.1 0.6 3.4 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein ADIP PF11559.8 RKO86131.1 - 5.5 7.1 15.7 74 3.4 14.7 2.5 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Glutaredoxin PF00462.24 RKO86135.1 - 8.2e-19 67.6 0.0 3.8e-18 65.4 0.0 2.0 2 0 0 2 2 2 1 Glutaredoxin Thioredoxin PF00085.20 RKO86135.1 - 4.4e-14 52.3 0.0 7.7e-14 51.5 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin HyaE PF07449.11 RKO86135.1 - 0.00018 21.5 0.0 0.037 14.0 0.0 2.3 2 1 0 2 2 2 2 Hydrogenase-1 expression protein HyaE Thioredoxin_8 PF13905.6 RKO86135.1 - 0.00043 20.6 0.0 0.026 14.9 0.0 2.5 1 1 1 2 2 2 1 Thioredoxin-like Thioredoxin_2 PF13098.6 RKO86135.1 - 0.058 13.9 0.1 0.59 10.6 0.1 2.4 1 1 0 1 1 1 0 Thioredoxin-like domain Phosducin PF02114.16 RKO86135.1 - 0.19 10.7 0.0 0.42 9.5 0.0 1.5 1 1 0 1 1 1 0 Phosducin WD40 PF00400.32 RKO86136.1 - 2.3e-06 28.2 0.0 0.028 15.3 0.0 2.2 2 0 0 2 2 2 2 WD domain, G-beta repeat TPR_1 PF00515.28 RKO86137.1 - 0.095 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Mg_trans_NIPA PF05653.14 RKO86139.1 - 3.1e-22 79.0 4.3 3.4e-19 69.1 4.2 2.9 3 0 0 3 3 3 3 Magnesium transporter NIPA EamA PF00892.20 RKO86139.1 - 0.00012 22.2 1.4 0.00012 22.2 1.4 3.7 4 1 0 4 4 4 2 EamA-like transporter family 2-oxoacid_dh PF00198.23 RKO86140.1 - 7.7e-24 84.4 0.1 1.2e-23 83.8 0.1 1.3 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 RKO86140.1 - 2e-16 59.5 0.0 3.7e-16 58.7 0.0 1.4 1 0 0 1 1 1 1 Biotin-requiring enzyme E3_binding PF02817.17 RKO86140.1 - 9.7e-16 57.8 0.6 9.7e-16 57.8 0.6 2.1 2 0 0 2 2 2 1 e3 binding domain Biotin_lipoyl_2 PF13533.6 RKO86140.1 - 0.015 15.1 0.2 0.41 10.5 0.0 2.4 2 0 0 2 2 2 0 Biotin-lipoyl like HlyD_D23 PF16576.5 RKO86140.1 - 0.074 12.2 0.0 0.13 11.5 0.0 1.4 1 0 0 1 1 1 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion Formyl_trans_N PF00551.19 RKO86141.1 - 2.7e-39 134.8 0.4 3.4e-39 134.4 0.4 1.1 1 0 0 1 1 1 1 Formyl transferase ACT PF01842.25 RKO86141.1 - 0.00025 20.8 0.0 0.00073 19.3 0.0 1.8 1 0 0 1 1 1 1 ACT domain ACT_6 PF13740.6 RKO86141.1 - 0.0061 16.5 0.1 0.013 15.5 0.1 1.5 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 RKO86141.1 - 0.017 15.7 0.0 0.053 14.1 0.0 1.8 1 0 0 1 1 1 0 ACT domain Integrase_H2C2 PF17921.1 RKO86142.1 - 4e-10 39.6 0.6 6.1e-10 39.1 0.6 1.3 1 0 0 1 1 1 1 Integrase zinc binding domain NRIP1_repr_1 PF15687.5 RKO86142.1 - 0.032 13.9 1.1 0.048 13.3 1.1 1.2 1 0 0 1 1 1 0 Nuclear receptor-interacting protein 1 repression 1 rve PF00665.26 RKO86142.1 - 0.054 13.7 0.0 0.089 13.0 0.0 1.3 1 0 0 1 1 1 0 Integrase core domain DUF1160 PF06648.11 RKO86143.1 - 0.064 13.2 0.0 0.16 12.0 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1160) YL1_C PF08265.11 RKO86144.1 - 2.4e-16 59.2 0.2 3.1e-16 58.8 0.2 1.2 1 0 0 1 1 1 1 YL1 nuclear protein C-terminal domain JmjC PF02373.22 RKO86145.1 - 1.9e-09 38.0 0.0 3.7e-09 37.0 0.0 1.5 1 1 0 1 1 1 1 JmjC domain, hydroxylase Cupin_8 PF13621.6 RKO86145.1 - 1.5e-06 28.2 0.0 2.3e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Cupin-like domain AF-4 PF05110.13 RKO86145.1 - 0.00067 17.9 7.0 0.00076 17.7 7.0 1.0 1 0 0 1 1 1 1 AF-4 proto-oncoprotein SR-25 PF10500.9 RKO86145.1 - 0.0032 17.1 12.9 0.0047 16.6 12.9 1.1 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein Plant_zn_clust PF10533.9 RKO86145.1 - 0.0042 17.0 3.7 0.009 16.0 3.1 1.8 2 0 0 2 2 2 1 Plant zinc cluster domain IMUP PF15761.5 RKO86145.1 - 0.01 16.5 6.4 0.018 15.7 6.4 1.4 1 0 0 1 1 1 0 Immortalisation up-regulated protein Pep1_7 PF17232.2 RKO86145.1 - 0.024 15.1 3.9 0.041 14.3 3.9 1.4 1 0 0 1 1 1 0 Elicitor peptide 1-7 DUF3446 PF11928.8 RKO86145.1 - 0.076 13.3 10.8 0.14 12.5 10.8 1.4 1 0 0 1 1 1 0 Early growth response N-terminal domain CCDC106 PF15794.5 RKO86145.1 - 0.51 10.0 2.6 0.73 9.5 2.6 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Herpes_pp85 PF04637.12 RKO86145.1 - 6.3 5.1 5.6 7.5 4.8 5.6 1.1 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) Yae1_N PF09811.9 RKO86147.1 - 0.16 11.7 0.3 0.33 10.7 0.3 1.4 1 0 0 1 1 1 0 Essential protein Yae1, N terminal BES1_N PF05687.13 RKO86150.1 - 0.1 13.0 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal EGF_2 PF07974.13 RKO86152.1 - 6.8e-05 23.2 8.9 0.00011 22.5 8.9 1.4 1 0 0 1 1 1 1 EGF-like domain hEGF PF12661.7 RKO86152.1 - 0.0038 17.8 6.0 0.0038 17.8 6.0 2.2 2 0 0 2 2 2 1 Human growth factor-like EGF EGF_Tenascin PF18720.1 RKO86152.1 - 0.0058 16.6 9.8 0.0058 16.6 9.8 1.6 2 0 0 2 2 2 1 Tenascin EGF domain I-EGF_1 PF18372.1 RKO86152.1 - 0.0074 16.3 3.9 0.018 15.2 3.9 1.6 1 0 0 1 1 1 1 Integrin beta epidermal growth factor like domain 1 EGF PF00008.27 RKO86152.1 - 0.088 13.1 9.4 0.19 12.0 9.4 1.6 1 0 0 1 1 1 0 EGF-like domain EB PF01683.18 RKO86152.1 - 0.27 11.5 4.8 0.45 10.8 4.8 1.4 1 0 0 1 1 1 0 EB module ADH_zinc_N_2 PF13602.6 RKO86154.1 - 1.6e-12 48.7 0.0 1.9e-12 48.4 0.0 1.1 1 0 0 1 1 1 1 Zinc-binding dehydrogenase APH PF01636.23 RKO86156.1 - 0.094 12.6 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family A2L_zn_ribbon PF08792.10 RKO86157.1 - 0.16 11.7 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 A2L zinc ribbon domain Clp_N PF02861.20 RKO86159.1 - 0.19 11.9 0.5 48 4.2 0.0 3.0 3 0 0 3 3 3 0 Clp amino terminal domain, pathogenicity island component Sod_Cu PF00080.20 RKO86160.1 - 2.3e-47 160.7 4.4 2.7e-47 160.5 4.4 1.0 1 0 0 1 1 1 1 Copper/zinc superoxide dismutase (SODC) CHRD PF07452.12 RKO86160.1 - 0.016 16.2 2.9 0.067 14.2 2.9 1.9 1 1 0 1 1 1 0 CHRD domain Chloroplast_duf PF14476.6 RKO86161.1 - 0.11 11.5 0.1 0.14 11.1 0.1 1.1 1 0 0 1 1 1 0 Petal formation-expressed Galactosyl_T PF01762.21 RKO86162.1 - 3.3e-10 40.1 0.0 7.1e-08 32.5 0.0 2.1 1 1 1 2 2 2 2 Galactosyltransferase Glyoxal_oxid_N PF07250.11 RKO86163.1 - 1.7e-35 122.4 0.0 5.6e-35 120.7 0.0 1.9 1 1 0 1 1 1 1 Glyoxal oxidase N-terminus DUF1929 PF09118.11 RKO86163.1 - 6.2e-25 87.3 1.2 1.1e-24 86.5 1.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1929) Kelch_6 PF13964.6 RKO86163.1 - 0.00022 21.4 0.1 13 6.2 0.0 4.4 4 1 1 5 5 5 2 Kelch motif Kelch_4 PF13418.6 RKO86163.1 - 0.00038 20.4 0.0 0.16 12.0 0.0 4.2 5 0 0 5 5 5 1 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO86163.1 - 0.0024 17.8 0.0 0.15 12.1 0.0 3.2 3 0 0 3 3 3 1 Kelch motif DUF3439 PF11921.8 RKO86163.1 - 0.071 13.1 0.5 9.1 6.3 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3439) PH PF00169.29 RKO86164.1 - 3.8e-07 30.6 0.0 8.4e-07 29.5 0.0 1.6 1 1 0 1 1 1 1 PH domain IATP PF04568.12 RKO86164.1 - 4.5 7.8 4.3 13 6.3 0.1 2.9 3 0 0 3 3 3 0 Mitochondrial ATPase inhibitor, IATP NCA2 PF08637.10 RKO86165.1 - 8.4e-29 100.6 0.1 2.6e-15 56.4 0.0 2.2 2 0 0 2 2 2 2 ATP synthase regulation protein NCA2 TatC PF00902.18 RKO86170.1 - 0.011 15.6 0.1 0.018 14.9 0.1 1.3 1 0 0 1 1 1 0 Sec-independent protein translocase protein (TatC) SKG6 PF08693.10 RKO86170.1 - 0.18 11.3 2.3 0.4 10.1 2.3 1.5 1 0 0 1 1 1 0 Transmembrane alpha-helix domain Chitin_synth_1N PF08407.11 RKO86171.1 - 1.3e-16 60.3 0.0 2.4e-16 59.5 0.0 1.4 1 0 0 1 1 1 1 Chitin synthase N-terminal 7tm_2 PF00002.24 RKO86173.1 - 2.7e-08 33.4 2.8 3e-08 33.3 2.8 1.0 1 0 0 1 1 1 1 7 transmembrane receptor (Secretin family) Dicty_CAR PF05462.11 RKO86173.1 - 5.1e-08 32.4 2.3 6.1e-08 32.2 2.3 1.0 1 0 0 1 1 1 1 Slime mold cyclic AMP receptor 7TM_GPCR_Srsx PF10320.9 RKO86173.1 - 0.0033 16.8 0.1 0.0043 16.5 0.1 1.2 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Srsx 7tm_1 PF00001.21 RKO86173.1 - 0.018 14.4 1.3 0.024 14.0 1.3 1.4 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) Git3 PF11710.8 RKO86173.1 - 0.1 12.4 7.9 0.67 9.7 7.9 1.9 1 1 0 1 1 1 0 G protein-coupled glucose receptor regulating Gpa2 TPR_16 PF13432.6 RKO86174.1 - 1.7e-08 35.0 2.8 2e-08 34.7 2.8 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 RKO86174.1 - 6.5e-08 32.1 3.6 0.0002 21.2 0.4 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 RKO86174.1 - 6.3e-06 26.6 3.2 0.002 18.8 0.5 2.0 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 RKO86174.1 - 3e-05 24.1 1.1 0.016 15.6 0.0 2.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 RKO86174.1 - 5.8e-05 22.7 2.2 0.0097 15.7 0.1 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.6 RKO86174.1 - 8.3e-05 23.0 0.7 0.051 14.2 0.1 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO86174.1 - 0.00066 20.1 1.6 0.00066 20.1 1.6 1.3 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 RKO86174.1 - 0.0059 16.3 4.7 0.11 12.3 0.7 2.3 1 1 1 2 2 2 2 TPR repeat TPR_8 PF13181.6 RKO86174.1 - 0.0076 16.4 1.1 0.027 14.7 0.2 2.1 2 1 0 2 2 2 1 Tetratricopeptide repeat DUF4919 PF16266.5 RKO86174.1 - 0.041 13.8 0.0 0.045 13.7 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4919) HdeA PF06411.11 RKO86174.1 - 0.058 13.6 0.0 0.064 13.5 0.0 1.2 1 0 0 1 1 1 0 HdeA/HdeB family Fis1_TPR_C PF14853.6 RKO86174.1 - 0.065 13.3 0.1 0.12 12.4 0.1 1.7 1 1 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat PPTA PF01239.22 RKO86174.1 - 0.068 12.9 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 Protein prenyltransferase alpha subunit repeat PH_12 PF16457.5 RKO86175.1 - 3.2e-29 102.2 0.0 9e-29 100.7 0.0 1.8 2 0 0 2 2 2 1 Pleckstrin homology domain ELMO_CED12 PF04727.13 RKO86175.1 - 6.5e-16 58.9 0.0 1.2e-15 58.1 0.0 1.4 1 0 0 1 1 1 1 ELMO/CED-12 family ThiF PF00899.21 RKO86176.1 - 5.8e-34 117.5 0.0 7.3e-34 117.2 0.0 1.1 1 0 0 1 1 1 1 ThiF family Shikimate_DH PF01488.20 RKO86176.1 - 0.0091 16.1 0.0 0.013 15.6 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Pyr_redox PF00070.27 RKO86176.1 - 0.015 15.8 0.0 0.031 14.8 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Sacchrp_dh_NADP PF03435.18 RKO86176.1 - 0.099 12.9 0.1 0.15 12.3 0.1 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain TrkA_N PF02254.18 RKO86176.1 - 0.15 12.3 0.0 0.22 11.8 0.0 1.3 1 0 0 1 1 1 0 TrkA-N domain APG12 PF04110.13 RKO86177.1 - 1.1e-09 38.6 0.1 1.1e-09 38.5 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 NDK PF00334.19 RKO86179.1 - 2.3e-50 170.1 0.0 2.7e-50 169.9 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Methyltransf_31 PF13847.6 RKO86182.1 - 1.5e-12 47.5 0.1 1.8e-12 47.3 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 RKO86182.1 - 1.1e-08 35.6 0.0 3.4e-08 34.1 0.0 1.8 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 RKO86182.1 - 2e-06 28.4 0.0 4.8e-06 27.1 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 RKO86182.1 - 2.1e-06 27.4 0.0 2.9e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.12 RKO86182.1 - 2.4e-06 28.2 0.1 3.8e-06 27.6 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 RKO86182.1 - 2.8e-05 24.2 0.0 3.4e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 RKO86182.1 - 3.8e-05 23.6 0.0 4.7e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 RKO86182.1 - 0.00019 20.9 0.0 0.00025 20.5 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB PrmA PF06325.13 RKO86182.1 - 0.00052 19.5 0.1 0.00071 19.1 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) tRNA_U5-meth_tr PF05958.11 RKO86182.1 - 0.0069 15.4 0.0 0.009 15.0 0.0 1.1 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase AdoMet_MTase PF07757.13 RKO86182.1 - 0.0077 16.6 0.1 0.011 16.1 0.1 1.2 1 0 0 1 1 1 1 Predicted AdoMet-dependent methyltransferase MetW PF07021.12 RKO86182.1 - 0.024 14.2 0.0 0.038 13.6 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_4 PF02390.17 RKO86182.1 - 0.11 12.0 0.0 0.17 11.4 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Ubie_methyltran PF01209.18 RKO86182.1 - 0.12 11.7 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_20 PF12147.8 RKO86182.1 - 0.14 11.3 0.0 0.17 11.0 0.0 1.1 1 0 0 1 1 1 0 Putative methyltransferase Ank_4 PF13637.6 RKO86183.1 - 0.053 14.1 0.1 0.15 12.7 0.0 1.8 2 0 0 2 2 2 0 Ankyrin repeats (many copies) Pkinase PF00069.25 RKO86187.1 - 3e-23 82.6 0.0 2e-19 70.0 0.0 2.1 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 RKO86187.1 - 7.3e-13 48.4 0.0 2.8e-10 39.9 0.0 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase Kdo PF06293.14 RKO86187.1 - 2.2e-05 23.9 0.0 3.2e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 RKO86187.1 - 0.00025 20.5 0.0 0.00038 19.9 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 RKO86187.1 - 0.00035 20.6 0.0 0.00064 19.7 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 RKO86187.1 - 0.00074 18.6 0.0 0.00099 18.1 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 RKO86187.1 - 0.0047 16.5 0.0 0.0071 16.0 0.0 1.2 1 0 0 1 1 1 1 RIO1 family FTA2 PF13095.6 RKO86187.1 - 0.096 12.3 0.1 0.14 11.7 0.1 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 DUF4135 PF13575.6 RKO86187.1 - 0.18 11.1 0.0 0.26 10.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) Jagunal PF07086.12 RKO86190.1 - 0.026 14.6 0.6 0.074 13.1 0.1 1.9 2 0 0 2 2 2 0 Jagunal, ER re-organisation during oogenesis TPR_19 PF14559.6 RKO86192.1 - 8.9e-05 22.9 3.9 0.0071 16.8 0.1 4.7 5 1 1 6 6 6 1 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO86192.1 - 0.0025 18.0 11.7 0.056 13.7 3.2 3.5 3 1 1 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_12 PF13424.6 RKO86192.1 - 0.02 15.2 1.2 8.4 6.8 0.2 3.5 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_9 PF13371.6 RKO86192.1 - 0.02 15.0 0.0 0.91 9.7 0.0 2.6 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 RKO86192.1 - 0.032 14.3 10.2 20 5.6 0.0 5.8 6 0 0 6 6 6 0 Tetratricopeptide repeat DUF1702 PF08012.11 RKO86192.1 - 0.092 11.6 0.0 0.14 11.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1702) PPR PF01535.20 RKO86192.1 - 0.67 10.3 4.2 4.2 7.8 0.0 3.9 4 0 0 4 4 4 0 PPR repeat Gar1 PF04410.14 RKO86194.1 - 1.7e-10 40.9 0.2 4.4e-10 39.5 0.0 1.7 2 0 0 2 2 2 1 Gar1/Naf1 RNA binding region PAS PF00989.25 RKO86195.1 - 0.0046 17.0 0.0 0.011 15.7 0.0 1.7 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 RKO86195.1 - 0.02 15.2 0.0 0.29 11.4 0.0 2.1 2 0 0 2 2 2 0 PAS domain Proteasome PF00227.26 RKO86196.1 - 4.2e-64 215.6 0.4 5.2e-64 215.2 0.4 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 RKO86196.1 - 3.7e-14 52.1 0.1 8.4e-14 50.9 0.1 1.7 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature WD40 PF00400.32 RKO86198.1 - 1.3e-05 25.8 0.4 0.029 15.2 0.2 2.9 2 0 0 2 2 2 2 WD domain, G-beta repeat TFIID_20kDa PF03847.13 RKO86200.1 - 3.1e-22 78.9 0.2 3.5e-22 78.7 0.2 1.0 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A TFIID-31kDa PF02291.15 RKO86200.1 - 0.011 15.8 0.0 0.011 15.8 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit CBFD_NFYB_HMF PF00808.23 RKO86200.1 - 0.019 15.2 0.0 0.022 15.0 0.0 1.2 1 0 0 1 1 1 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone PDZ_2 PF13180.6 RKO86200.1 - 0.047 14.0 0.1 0.055 13.8 0.1 1.1 1 0 0 1 1 1 0 PDZ domain DNA_pol_lambd_f PF10391.9 RKO86201.1 - 2.2e-20 72.2 0.2 1.8e-19 69.3 0.0 2.1 2 0 0 2 2 2 1 Fingers domain of DNA polymerase lambda HHH_8 PF14716.6 RKO86201.1 - 1.9e-13 50.5 0.0 1.2e-12 48.0 0.4 2.0 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_5 PF14520.6 RKO86201.1 - 0.00015 22.3 0.0 0.55 10.9 0.0 2.4 2 0 0 2 2 2 2 Helix-hairpin-helix domain HHH_2 PF12826.7 RKO86201.1 - 0.017 15.2 0.0 0.76 9.9 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix motif Cdd1 PF11731.8 RKO86201.1 - 0.057 13.6 0.0 0.52 10.6 0.0 2.4 2 0 0 2 2 2 0 Pathogenicity locus HHH PF00633.23 RKO86201.1 - 0.13 12.2 0.1 26 4.9 0.1 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix motif Ribosomal_S5_C PF03719.15 RKO86205.1 - 1.3e-16 59.8 0.0 1.5e-16 59.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain AMPK1_CBM PF16561.5 RKO86206.1 - 2.9e-13 49.8 0.3 3.2e-13 49.7 0.3 1.0 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase p450 PF00067.22 RKO86207.1 - 1.8e-20 73.1 0.0 2e-20 73.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Neurexophilin PF06312.12 RKO86207.1 - 0.053 13.0 0.0 0.073 12.5 0.0 1.2 1 0 0 1 1 1 0 Neurexophilin FAM176 PF14851.6 RKO86208.1 - 0.00031 20.4 0.9 0.00042 20.0 0.9 1.2 1 0 0 1 1 1 1 FAM176 family Myc_N PF01056.18 RKO86208.1 - 0.0046 16.9 3.0 0.0048 16.9 3.0 1.1 1 0 0 1 1 1 1 Myc amino-terminal region RR_TM4-6 PF06459.12 RKO86208.1 - 0.0055 16.6 2.9 0.0055 16.6 2.9 1.1 1 0 0 1 1 1 1 Ryanodine Receptor TM 4-6 Sporozoite_P67 PF05642.11 RKO86208.1 - 0.0085 14.2 2.0 0.0095 14.1 2.0 1.0 1 0 0 1 1 1 1 Sporozoite P67 surface antigen V_ATPase_I PF01496.19 RKO86208.1 - 0.052 11.5 0.9 0.054 11.4 0.9 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4611 PF15387.6 RKO86208.1 - 0.053 13.8 10.0 0.086 13.1 10.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) CLN3 PF02487.17 RKO86208.1 - 0.054 12.5 0.1 0.064 12.3 0.1 1.0 1 0 0 1 1 1 0 CLN3 protein Serinc PF03348.15 RKO86208.1 - 0.28 10.1 0.1 0.29 10.0 0.1 1.0 1 0 0 1 1 1 0 Serine incorporator (Serinc) PBP1_TM PF14812.6 RKO86208.1 - 0.34 11.3 10.0 0.54 10.7 10.0 1.4 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Connexin PF00029.19 RKO86208.1 - 0.35 10.6 1.6 0.43 10.3 1.6 1.1 1 0 0 1 1 1 0 Connexin TRAP_alpha PF03896.16 RKO86208.1 - 0.59 9.3 7.4 1.3 8.2 7.4 1.5 1 1 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit MCM_bind PF09739.9 RKO86208.1 - 0.59 8.5 5.9 0.69 8.3 5.9 1.1 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor Presenilin PF01080.17 RKO86208.1 - 1.6 7.4 3.6 1.8 7.3 3.6 1.1 1 0 0 1 1 1 0 Presenilin 4HBT_2 PF13279.6 RKO86210.1 - 5.5e-18 65.6 0.0 7e-18 65.3 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily 4HBT PF03061.22 RKO86210.1 - 0.00047 20.5 0.1 0.0013 19.0 0.1 1.8 1 1 0 1 1 1 1 Thioesterase superfamily Acyl-ACP_TE PF01643.17 RKO86210.1 - 0.0028 17.0 0.8 0.21 10.9 0.6 2.1 2 0 0 2 2 2 2 Acyl-ACP thioesterase WD40 PF00400.32 RKO86215.1 - 7.3e-07 29.8 0.9 0.022 15.6 0.0 4.3 5 1 0 5 5 5 2 WD domain, G-beta repeat Proteasome_A_N PF10584.9 RKO86215.1 - 0.083 12.6 0.3 0.33 10.7 0.0 2.2 2 0 0 2 2 2 0 Proteasome subunit A N-terminal signature WD40 PF00400.32 RKO86217.1 - 1.2e-16 60.7 6.8 7.1e-05 23.5 0.0 4.9 5 0 0 5 5 5 3 WD domain, G-beta repeat Nup160 PF11715.8 RKO86217.1 - 0.0009 18.0 0.1 0.038 12.6 0.0 2.8 2 1 1 3 3 3 1 Nucleoporin Nup120/160 RskA PF10099.9 RKO86217.1 - 0.087 13.1 6.2 0.27 11.5 6.2 1.8 1 0 0 1 1 1 0 Anti-sigma-K factor rskA APC_u14 PF16635.5 RKO86218.1 - 0.12 13.0 0.0 0.14 12.7 0.0 1.0 1 0 0 1 1 1 0 Unstructured region on APC between SAMP and APC_crr Insulin_TMD PF17870.1 RKO86221.1 - 0.011 15.8 1.1 0.1 12.7 0.0 2.1 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment ADH_zinc_N_2 PF13602.6 RKO86223.1 - 4.6e-14 53.6 0.0 1.2e-13 52.2 0.0 1.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 RKO86223.1 - 4.6e-09 36.1 0.1 8.7e-09 35.2 0.1 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 RKO86223.1 - 7.2e-08 32.5 0.0 6.7e-07 29.4 0.0 2.1 2 0 0 2 2 2 1 Zinc-binding dehydrogenase MutS_V PF00488.21 RKO86224.1 - 1e-54 185.4 0.2 2e-54 184.5 0.2 1.4 1 0 0 1 1 1 1 MutS domain V MutS_III PF05192.18 RKO86224.1 - 5.7e-23 82.1 0.0 9.7e-13 48.8 1.4 2.3 1 1 1 2 2 2 2 MutS domain III MutS_IV PF05190.18 RKO86224.1 - 3e-06 27.5 0.2 6.7e-06 26.4 0.2 1.6 1 1 0 1 1 1 1 MutS family domain IV AAA_27 PF13514.6 RKO86224.1 - 0.014 15.0 0.0 0.025 14.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 RKO86224.1 - 0.033 13.9 0.1 0.086 12.5 0.1 1.6 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 RKO86224.1 - 0.035 14.1 0.0 0.088 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 RKO86224.1 - 0.058 13.1 0.0 0.13 12.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF2551 PF10826.8 RKO86224.1 - 0.064 13.5 0.6 0.69 10.2 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2551) IKI3 PF04762.12 RKO86225.1 - 1e-41 142.9 0.9 1.6e-41 142.3 0.9 1.2 1 0 0 1 1 1 1 IKI3 family Arm-DNA-bind_3 PF13356.6 RKO86225.1 - 0.047 14.1 3.2 0.38 11.2 0.4 2.9 2 0 0 2 2 2 0 Arm DNA-binding domain DUF4736 PF15883.5 RKO86225.1 - 0.06 13.1 0.2 0.15 11.7 0.2 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4736) Pkinase PF00069.25 RKO86226.1 - 0.00011 21.7 0.0 0.00014 21.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain DUF4034 PF13226.6 RKO86226.1 - 0.34 10.2 0.6 10 5.4 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4034) Amidase PF01425.21 RKO86226.1 - 6.1 5.7 7.0 9.4 5.1 7.0 1.2 1 0 0 1 1 1 0 Amidase CNH PF00780.22 RKO86227.1 - 1.1e-16 61.3 0.0 1.5e-16 60.8 0.0 1.2 1 0 0 1 1 1 1 CNH domain ANAPC4_WD40 PF12894.7 RKO86227.1 - 0.088 13.1 0.1 0.29 11.4 0.0 1.9 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Thioredoxin_8 PF13905.6 RKO86228.1 - 0.053 13.9 0.0 0.45 10.9 0.0 2.0 2 0 0 2 2 2 0 Thioredoxin-like EphA2_TM PF14575.6 RKO86229.1 - 0.026 15.4 0.1 0.048 14.5 0.1 1.3 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain DUF4381 PF14316.6 RKO86229.1 - 0.11 12.7 0.3 0.24 11.6 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Asp PF00026.23 RKO86230.1 - 1.7e-21 77.0 0.0 1.8e-21 76.9 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 RKO86230.1 - 0.12 12.2 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal HLH PF00010.26 RKO86231.1 - 1.2e-09 38.0 0.0 1.5e-09 37.7 0.0 1.2 1 0 0 1 1 1 1 Helix-loop-helix DNA-binding domain BCCT PF02028.17 RKO86232.1 - 0.11 10.9 0.4 0.17 10.3 0.4 1.2 1 0 0 1 1 1 0 BCCT, betaine/carnitine/choline family transporter GATA PF00320.27 RKO86233.1 - 6.8 6.4 7.9 26 4.5 0.1 3.5 4 0 0 4 4 4 0 GATA zinc finger Viral_Beta_CD PF04530.12 RKO86235.1 - 0.051 13.9 3.1 0.13 12.6 3.1 1.6 1 0 0 1 1 1 0 Viral Beta C/D like family TMEM154 PF15102.6 RKO86235.1 - 0.3 11.0 3.2 0.69 9.8 3.2 1.5 1 0 0 1 1 1 0 TMEM154 protein family Sporozoite_P67 PF05642.11 RKO86235.1 - 1.1 7.2 11.5 1.5 6.8 11.5 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen ADH_zinc_N PF00107.26 RKO86237.1 - 0.071 13.1 0.1 0.092 12.7 0.1 1.2 1 0 0 1 1 1 0 Zinc-binding dehydrogenase PepSY_2 PF13670.6 RKO86237.1 - 1.6 8.8 5.2 2.1 8.4 5.2 1.2 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain Adeno_PV PF03910.13 RKO86237.1 - 3.9 6.1 5.1 4.4 5.9 5.1 1.1 1 0 0 1 1 1 0 Adenovirus minor core protein PV DUF4637 PF15470.6 RKO86239.1 - 0.13 12.0 3.9 0.19 11.4 3.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) Merozoite_SPAM PF07133.11 RKO86239.1 - 0.28 11.1 12.9 0.37 10.8 12.9 1.1 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) Hamartin PF04388.12 RKO86239.1 - 0.53 8.9 5.0 0.66 8.6 5.0 1.1 1 0 0 1 1 1 0 Hamartin protein MFS_1 PF07690.16 RKO86244.1 - 1.5e-18 66.9 16.2 2.7e-18 66.0 16.3 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO86244.1 - 2e-06 27.0 1.6 3.8e-06 26.0 1.6 1.5 1 0 0 1 1 1 1 Sugar (and other) transporter TRI12 PF06609.13 RKO86244.1 - 2.4e-05 23.0 0.8 3.6e-05 22.4 0.8 1.2 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) MFS_2 PF13347.6 RKO86244.1 - 0.001 17.7 3.7 0.001 17.7 3.7 2.1 2 1 0 2 2 2 1 MFS/sugar transport protein OATP PF03137.20 RKO86244.1 - 0.0053 15.1 0.7 0.012 13.9 0.7 1.7 1 0 0 1 1 1 1 Organic Anion Transporter Polypeptide (OATP) family Corona_nucleoca PF00937.18 RKO86245.1 - 0.012 14.7 0.6 1.7 7.6 0.0 2.2 2 0 0 2 2 2 0 Coronavirus nucleocapsid protein E1-E2_ATPase PF00122.20 RKO86246.1 - 1.3e-34 119.4 6.5 2.5e-34 118.4 6.5 1.5 1 0 0 1 1 1 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 RKO86246.1 - 6.6e-24 84.6 0.1 2.2e-23 82.9 0.0 1.8 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Cation_ATPase PF13246.6 RKO86246.1 - 9.1e-20 70.5 0.0 1.8e-19 69.6 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase PF00702.26 RKO86246.1 - 3.4e-18 66.7 0.1 2.4e-17 63.9 0.1 2.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 RKO86246.1 - 0.00047 20.0 0.2 0.0012 18.7 0.3 1.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase zf-C2H2_4 PF13894.6 RKO86247.1 - 0.0008 20.0 5.6 0.19 12.6 0.7 2.3 2 1 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO86247.1 - 0.0025 18.1 9.9 0.014 15.8 0.3 2.9 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2 PF00096.26 RKO86247.1 - 0.0066 16.8 1.2 0.0066 16.8 1.2 3.1 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-C2H2_aberr PF17017.5 RKO86247.1 - 0.017 15.3 1.1 0.34 11.0 0.1 2.0 2 0 0 2 2 2 0 Aberrant zinc-finger zf-nanos PF05741.13 RKO86247.1 - 0.04 14.1 0.2 0.066 13.4 0.1 1.5 1 1 0 1 1 1 0 Nanos RNA binding domain zf-C2H2_jaz PF12171.8 RKO86247.1 - 0.062 13.6 0.5 0.062 13.6 0.5 2.6 4 0 0 4 4 4 0 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 RKO86247.1 - 0.19 12.2 0.4 0.19 12.2 0.4 2.6 4 0 0 4 4 4 0 Zinc-finger of C2H2 type Pkinase PF00069.25 RKO86248.1 - 7.8e-19 68.1 0.0 9.5e-19 67.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO86248.1 - 3.4e-06 26.5 0.0 4.5e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO86248.1 - 0.0027 17.7 0.0 0.0049 16.8 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family CtaG_Cox11 PF04442.14 RKO86249.1 - 2.3e-60 203.0 0.1 2.6e-60 202.8 0.1 1.0 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein CtaG/Cox11 Peptidase_M60_C PF18630.1 RKO86249.1 - 0.14 12.3 0.0 0.26 11.4 0.0 1.4 1 0 0 1 1 1 0 Peptidase M60 C-terminal domain Amidohydro_3 PF07969.11 RKO86250.1 - 6e-05 22.7 0.1 0.00011 21.9 0.1 1.4 1 0 0 1 1 1 1 Amidohydrolase family Herpes_Helicase PF02689.14 RKO86251.1 - 0.023 12.7 0.0 0.023 12.7 0.0 1.1 1 0 0 1 1 1 0 Helicase PIF1 PF05970.14 RKO86252.1 - 5.3e-28 98.2 0.1 8.4e-28 97.6 0.1 1.3 1 0 0 1 1 1 1 PIF1-like helicase AAA_30 PF13604.6 RKO86252.1 - 2.5e-13 50.2 0.1 3.6e-13 49.6 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 RKO86252.1 - 1.5e-09 38.4 0.2 3.1e-09 37.3 0.2 1.5 1 1 0 1 1 1 1 AAA domain DEAD PF00270.29 RKO86252.1 - 1.7e-05 24.7 0.1 0.013 15.3 0.1 2.2 2 0 0 2 2 2 2 DEAD/DEAH box helicase AAA_5 PF07728.14 RKO86252.1 - 5e-05 23.3 0.8 0.0008 19.4 0.8 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 RKO86252.1 - 8.8e-05 22.3 0.1 0.00013 21.7 0.1 1.3 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 RKO86252.1 - 0.00011 22.2 1.0 0.023 14.6 0.5 2.3 2 0 0 2 2 2 1 NTPase AAA_22 PF13401.6 RKO86252.1 - 0.00037 20.8 0.0 0.00086 19.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 RKO86252.1 - 0.00082 19.4 0.1 0.0042 17.1 0.1 2.0 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 RKO86252.1 - 0.0011 18.8 0.1 0.0095 15.7 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein PhoH PF02562.16 RKO86252.1 - 0.0027 17.2 0.0 0.0041 16.6 0.0 1.3 1 0 0 1 1 1 1 PhoH-like protein Mg_chelatase PF01078.21 RKO86252.1 - 0.008 15.6 0.1 0.016 14.6 0.1 1.7 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 RKO86252.1 - 0.018 14.6 0.1 0.033 13.7 0.1 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA PF00004.29 RKO86252.1 - 0.02 15.3 0.0 0.039 14.4 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 RKO86252.1 - 0.025 14.1 0.9 0.057 13.0 0.9 1.7 1 1 0 1 1 1 0 AAA domain AdoHcyase_NAD PF00670.21 RKO86252.1 - 0.028 14.5 0.4 0.15 12.2 0.1 2.1 2 1 1 3 3 3 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AAA_11 PF13086.6 RKO86252.1 - 0.033 14.0 0.7 0.2 11.4 0.0 2.3 3 0 0 3 3 3 0 AAA domain AAA_16 PF13191.6 RKO86252.1 - 0.033 14.6 0.5 0.12 12.8 0.1 2.0 2 0 0 2 2 2 0 AAA ATPase domain NACHT PF05729.12 RKO86252.1 - 0.054 13.4 1.4 0.14 12.1 0.3 2.0 2 0 0 2 2 2 0 NACHT domain AFG1_ATPase PF03969.16 RKO86252.1 - 0.11 11.4 0.0 0.13 11.1 0.0 1.4 1 0 0 1 1 1 0 AFG1-like ATPase RsgA_GTPase PF03193.16 RKO86252.1 - 0.11 12.4 0.1 0.19 11.6 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase ResIII PF04851.15 RKO86252.1 - 0.14 12.2 0.1 0.34 10.9 0.1 1.6 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Helicase_RecD PF05127.14 RKO86252.1 - 0.15 11.9 0.5 3.9 7.3 0.5 2.2 1 1 0 1 1 1 0 Helicase ATPase_2 PF01637.18 RKO86252.1 - 0.2 11.5 0.2 0.64 9.9 0.0 1.8 3 0 0 3 3 3 0 ATPase domain predominantly from Archaea UvrD-helicase PF00580.21 RKO86252.1 - 0.26 10.8 0.5 0.38 10.2 0.5 1.2 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain BLM10_mid PF16507.5 RKO86253.1 - 2.1e-140 468.9 0.0 4.2e-139 464.6 0.0 2.0 1 1 0 1 1 1 1 Proteasome-substrate-size regulator, mid region IgaA PF07095.11 RKO86253.1 - 0.09 10.8 0.0 0.14 10.1 0.0 1.2 1 0 0 1 1 1 0 Intracellular growth attenuator protein IgaA RGS PF00615.19 RKO86254.1 - 0.00024 21.3 0.3 0.0017 18.6 0.3 1.9 1 1 0 1 1 1 1 Regulator of G protein signaling domain TMEM18 PF14770.6 RKO86255.1 - 0.0088 16.0 5.1 0.26 11.3 0.1 2.9 2 1 0 2 2 2 2 Transmembrane protein 18 WD40 PF00400.32 RKO86256.1 - 0.00016 22.4 0.0 0.00025 21.8 0.0 1.4 1 0 0 1 1 1 1 WD domain, G-beta repeat SNRNP27 PF08648.12 RKO86256.1 - 0.0047 17.0 0.9 0.0047 17.0 0.9 1.7 2 0 0 2 2 2 1 U4/U6.U5 small nuclear ribonucleoproteins Pox_Ag35 PF03286.14 RKO86256.1 - 0.26 11.1 2.9 0.32 10.8 2.9 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Nop14 PF04147.12 RKO86256.1 - 0.67 8.1 5.7 0.72 8.0 5.7 1.0 1 0 0 1 1 1 0 Nop14-like family DNA_pol_phi PF04931.13 RKO86256.1 - 1.1 7.3 10.1 1.3 7.0 10.1 1.1 1 0 0 1 1 1 0 DNA polymerase phi NOA36 PF06524.12 RKO86256.1 - 3.3 6.9 7.0 3.9 6.7 7.0 1.1 1 0 0 1 1 1 0 NOA36 protein WD40 PF00400.32 RKO86257.1 - 4.8e-12 46.2 6.3 0.0028 18.4 0.0 5.0 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO86257.1 - 5e-06 26.7 0.0 0.11 12.8 0.0 3.7 2 2 2 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 RKO86257.1 - 0.0087 15.1 0.0 0.69 8.8 0.0 2.2 2 0 0 2 2 2 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Cytochrom_D1 PF02239.16 RKO86257.1 - 0.053 12.0 0.0 0.45 9.0 0.0 1.6 1 1 2 3 3 3 0 Cytochrome D1 heme domain PQQ_3 PF13570.6 RKO86257.1 - 0.12 12.9 0.5 23 5.7 0.0 2.6 2 0 0 2 2 2 0 PQQ-like domain Cation_ATPase_C PF00689.21 RKO86258.1 - 1.2e-13 51.2 0.2 1.3e-13 51.1 0.2 1.0 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus UL42 PF17638.2 RKO86260.1 - 0.088 12.8 3.6 0.18 11.8 3.6 1.5 1 0 0 1 1 1 0 HCMV UL42 ABC_tran PF00005.27 RKO86261.1 - 6e-28 98.1 0.0 8.5e-28 97.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter ABC2_membrane PF01061.24 RKO86261.1 - 7e-07 28.9 0.4 1e-06 28.4 0.4 1.2 1 0 0 1 1 1 1 ABC-2 type transporter RsgA_GTPase PF03193.16 RKO86261.1 - 2e-05 24.6 0.1 6e-05 23.0 0.1 1.7 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 RKO86261.1 - 0.00067 19.7 0.1 0.0012 18.9 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_21 PF13304.6 RKO86261.1 - 0.00072 19.4 2.3 0.88 9.3 0.0 2.7 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 RKO86261.1 - 0.00081 19.8 0.4 0.0015 18.9 0.4 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 RKO86261.1 - 0.0043 17.6 0.0 0.0076 16.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 RKO86261.1 - 0.0053 16.5 0.1 0.011 15.5 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 RKO86261.1 - 0.016 14.8 1.3 0.094 12.3 1.3 2.2 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 RKO86261.1 - 0.03 14.2 0.0 0.055 13.4 0.0 1.5 1 0 0 1 1 1 0 NACHT domain Dynamin_N PF00350.23 RKO86261.1 - 0.045 13.8 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 Dynamin family MeaB PF03308.16 RKO86261.1 - 0.049 12.6 0.4 0.079 11.9 0.4 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_13 PF13166.6 RKO86261.1 - 0.063 11.9 0.2 0.3 9.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 RKO86261.1 - 0.078 13.2 0.0 0.27 11.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 RKO86261.1 - 0.079 12.4 0.0 0.16 11.3 0.0 1.5 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_28 PF13521.6 RKO86261.1 - 0.094 13.0 0.7 0.16 12.2 0.2 1.7 2 0 0 2 2 1 0 AAA domain DUF87 PF01935.17 RKO86261.1 - 0.1 12.7 1.4 0.29 11.2 1.1 1.8 2 0 0 2 2 2 0 Helicase HerA, central domain ATP-synt_D PF01813.17 RKO86265.1 - 2.8e-18 66.5 0.1 3.2e-18 66.3 0.1 1.0 1 0 0 1 1 1 1 ATP synthase subunit D Ion_trans PF00520.31 RKO86266.1 - 1.1e-31 109.9 23.5 1.6e-31 109.4 23.5 1.2 1 0 0 1 1 1 1 Ion transport protein PKD_channel PF08016.12 RKO86266.1 - 5.6e-10 38.5 19.3 2.4e-09 36.4 19.3 1.8 1 1 0 1 1 1 1 Polycystin cation channel Peptidase_M6 PF05547.11 RKO86266.1 - 0.058 11.7 0.4 0.084 11.2 0.4 1.1 1 0 0 1 1 1 0 Immune inhibitor A peptidase M6 peroxidase PF00141.23 RKO86268.1 - 9.8e-17 61.4 0.0 1.4e-16 60.9 0.0 1.2 1 0 0 1 1 1 1 Peroxidase Trefoil PF00088.18 RKO86268.1 - 4.2e-13 49.0 7.2 1e-12 47.7 7.2 1.7 1 0 0 1 1 1 1 Trefoil (P-type) domain VWA PF00092.28 RKO86269.1 - 2.7e-06 27.7 0.0 9.6e-06 26.0 0.0 1.9 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 RKO86269.1 - 2.7e-06 28.0 0.0 6.6e-06 26.7 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain Phage_holin_4_2 PF04020.13 RKO86270.1 - 0.057 14.1 0.3 0.099 13.3 0.3 1.4 1 0 0 1 1 1 0 Mycobacterial 4 TMS phage holin, superfamily IV LAGLIDADG_3 PF14528.6 RKO86272.1 - 0.02 15.2 0.0 0.042 14.2 0.0 1.5 1 0 0 1 1 1 0 LAGLIDADG-like domain Lipase_GDSL_2 PF13472.6 RKO86273.1 - 0.027 14.9 0.4 0.048 14.1 0.4 1.4 1 1 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family Cation_ATPase_C PF00689.21 RKO86275.1 - 3.5e-47 160.5 6.5 4.1e-47 160.2 6.5 1.0 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus DUF674 PF05056.12 RKO86275.1 - 0.026 13.4 0.2 0.034 13.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF674) Dpy-30 PF05186.13 RKO86276.1 - 1.1e-18 66.6 1.6 1.3e-18 66.4 1.6 1.1 1 0 0 1 1 1 1 Dpy-30 motif SPX PF03105.19 RKO86283.1 - 2.2e-30 106.9 0.5 1e-22 81.6 0.0 2.6 1 1 1 2 2 2 2 SPX domain MraZ PF02381.18 RKO86284.1 - 0.028 14.4 0.1 35 4.5 0.0 3.2 3 0 0 3 3 3 0 MraZ protein, putative antitoxin-like SAM_KSR1 PF13543.6 RKO86285.1 - 0.53 10.4 0.1 0.53 10.4 0.1 4.9 4 1 1 5 5 5 0 SAM like domain present in kinase suppressor RAS 1 AAA PF00004.29 RKO86286.1 - 1.8e-07 31.7 0.0 2.7e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 RKO86286.1 - 6.4e-06 26.2 0.0 6.7e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 Rad17 P-loop domain DUF815 PF05673.13 RKO86286.1 - 1.4e-05 24.4 0.0 1.4e-05 24.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_11 PF13086.6 RKO86286.1 - 2.2e-05 24.4 0.0 2.4e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 RKO86286.1 - 5.8e-05 23.5 0.0 5.9e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain RuvB_N PF05496.12 RKO86286.1 - 7.4e-05 22.5 0.0 8.1e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_7 PF12775.7 RKO86286.1 - 0.00016 21.3 0.0 0.00017 21.1 0.0 1.1 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_5 PF07728.14 RKO86286.1 - 0.00026 21.0 0.1 0.00094 19.2 0.0 1.8 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 RKO86286.1 - 0.00082 19.7 0.0 0.00093 19.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 RKO86286.1 - 0.0027 17.5 0.0 0.0037 17.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain TniB PF05621.11 RKO86286.1 - 0.0034 16.8 0.0 0.0034 16.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial TniB protein ResIII PF04851.15 RKO86286.1 - 0.0036 17.3 0.0 0.0036 17.3 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 RKO86286.1 - 0.0047 17.2 0.0 0.006 16.9 0.0 1.3 1 1 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 RKO86286.1 - 0.0083 16.1 0.0 0.0091 15.9 0.0 1.1 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_30 PF13604.6 RKO86286.1 - 0.0095 15.7 0.0 0.01 15.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 RKO86286.1 - 0.023 15.3 0.0 0.03 14.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain TIP49 PF06068.13 RKO86286.1 - 0.023 13.9 0.0 0.024 13.8 0.0 1.1 1 0 0 1 1 1 0 TIP49 P-loop domain Mg_chelatase PF01078.21 RKO86286.1 - 0.045 13.1 0.0 0.052 12.9 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 RKO86286.1 - 0.05 13.5 0.0 0.06 13.2 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TK PF00265.18 RKO86286.1 - 0.058 13.3 0.0 0.087 12.7 0.0 1.2 1 0 0 1 1 1 0 Thymidine kinase FtsK_SpoIIIE PF01580.18 RKO86286.1 - 0.1 12.0 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 RKO86286.1 - 0.11 12.2 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein SRP54 PF00448.22 RKO86286.1 - 0.12 11.9 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_25 PF13481.6 RKO86286.1 - 0.13 11.8 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_8 PF12780.7 RKO86286.1 - 0.13 11.5 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region D4 T2SSE PF00437.20 RKO86286.1 - 0.14 11.2 0.0 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_14 PF13173.6 RKO86286.1 - 0.14 12.2 0.0 0.42 10.6 0.0 1.7 1 1 1 2 2 2 0 AAA domain AAA_28 PF13521.6 RKO86286.1 - 0.15 12.3 0.1 0.21 11.8 0.1 1.4 1 1 0 1 1 1 0 AAA domain SPC12 PF06645.13 RKO86287.1 - 6.5e-27 93.4 0.6 7.1e-27 93.3 0.6 1.0 1 0 0 1 1 1 1 Microsomal signal peptidase 12 kDa subunit (SPC12) DUF3040 PF11239.8 RKO86287.1 - 0.32 11.3 1.5 0.37 11.1 1.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) bZIP_1 PF00170.21 RKO86289.1 - 0.0039 17.2 10.7 0.33 11.1 10.7 2.5 1 1 0 1 1 1 1 bZIP transcription factor Zn_clus PF00172.18 RKO86293.1 - 2.9e-06 27.3 2.4 8.3e-06 25.8 2.4 1.7 1 0 0 1 1 1 1 Fungal Zn(2)-Cys(6) binuclear cluster domain Fungal_trans PF04082.18 RKO86293.1 - 0.0011 18.0 0.0 0.0019 17.3 0.0 1.2 1 0 0 1 1 1 1 Fungal specific transcription factor domain GCFC PF07842.12 RKO86294.1 - 2.3e-66 224.3 6.2 4.3e-65 220.1 6.2 2.2 1 1 0 1 1 1 1 GC-rich sequence DNA-binding factor-like protein G-patch PF01585.23 RKO86294.1 - 3.4e-14 52.5 1.7 1.1e-13 50.8 1.7 2.0 1 0 0 1 1 1 1 G-patch domain G-patch_2 PF12656.7 RKO86294.1 - 0.00023 21.2 1.2 0.00023 21.2 1.2 3.2 3 1 0 3 3 3 1 G-patch domain Ebola_NP PF05505.12 RKO86296.1 - 0.24 9.7 4.6 0.36 9.1 4.6 1.2 1 0 0 1 1 1 0 Ebola nucleoprotein SWIRM PF04433.17 RKO86297.1 - 1.4e-07 31.8 0.0 1.8e-07 31.4 0.0 1.1 1 0 0 1 1 1 1 SWIRM domain GPI-anchored PF10342.9 RKO86298.1 - 8.3e-05 23.3 1.0 8.3e-05 23.3 1.0 1.8 2 1 0 2 2 2 1 Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family Oxidored_FMN PF00724.20 RKO86299.1 - 5.1e-14 52.3 0.0 7.4e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family HAT PF02184.16 RKO86301.1 - 0.096 12.7 0.1 0.36 10.8 0.0 2.0 2 0 0 2 2 2 0 HAT (Half-A-TPR) repeat WD40 PF00400.32 RKO86303.1 - 2.9e-14 53.2 0.2 0.032 15.1 0.0 6.3 6 0 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO86303.1 - 3.9e-10 39.9 0.0 0.0014 18.9 0.0 4.4 2 1 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Cytochrom_D1 PF02239.16 RKO86303.1 - 3.2e-05 22.6 0.0 0.00012 20.7 0.0 1.9 2 0 0 2 2 2 1 Cytochrome D1 heme domain Ge1_WD40 PF16529.5 RKO86303.1 - 0.0098 14.9 0.2 9.3 5.1 0.0 3.5 3 1 1 4 4 4 2 WD40 region of Ge1, enhancer of mRNA-decapping protein RNA_lig_T4_1 PF09511.10 RKO86303.1 - 0.054 13.4 0.0 0.081 12.8 0.0 1.3 1 0 0 1 1 1 0 RNA ligase PD40 PF07676.12 RKO86303.1 - 0.065 13.2 0.0 29 4.8 0.0 3.2 3 0 0 3 3 3 0 WD40-like Beta Propeller Repeat Kelch_6 PF13964.6 RKO86303.1 - 0.072 13.4 0.0 5.3 7.5 0.1 3.2 3 0 0 3 3 3 0 Kelch motif LAG1-DNAbind PF09271.11 RKO86305.1 - 4.6e-21 76.0 0.0 2.6e-20 73.6 0.0 2.2 2 1 0 2 2 2 1 LAG1, DNA binding CENP-B_dimeris PF09026.10 RKO86305.1 - 6.9 7.1 9.3 3.9 7.9 4.8 2.3 2 0 0 2 2 2 0 Centromere protein B dimerisation domain Trefoil PF00088.18 RKO86307.1 - 1.8e-11 43.7 8.4 1.8e-11 43.7 8.4 1.6 2 0 0 2 2 2 1 Trefoil (P-type) domain DUF167 PF02594.16 RKO86309.1 - 3.5e-21 75.1 0.2 3.9e-21 74.9 0.2 1.0 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Pcc1 PF09341.10 RKO86311.1 - 5.8e-21 74.4 0.3 7.1e-21 74.1 0.3 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 RIB43A PF05914.12 RKO86312.1 - 6.4e-103 344.4 48.3 7.2e-103 344.2 48.3 1.0 1 0 0 1 1 1 1 RIB43A Imm40 PF15569.6 RKO86312.1 - 0.056 13.5 0.0 0.13 12.3 0.0 1.6 1 0 0 1 1 1 0 Immunity protein 40 ABC_tran PF00005.27 RKO86314.1 - 5e-32 111.3 0.0 7.2e-32 110.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 RKO86314.1 - 8.9e-06 25.4 0.0 2.2e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 RKO86314.1 - 3.2e-05 23.5 0.2 0.072 12.5 0.0 2.2 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 RKO86314.1 - 0.00078 19.5 0.0 0.0022 18.0 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_21 PF13304.6 RKO86314.1 - 0.0038 17.1 0.1 0.029 14.2 0.0 2.0 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 RKO86314.1 - 0.0049 17.3 0.1 0.0096 16.3 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain DUF87 PF01935.17 RKO86314.1 - 0.0057 16.8 0.1 0.0092 16.1 0.1 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_22 PF13401.6 RKO86314.1 - 0.007 16.6 0.1 0.71 10.1 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 RKO86314.1 - 0.0086 15.7 0.5 0.44 10.1 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 RKO86314.1 - 0.013 15.2 0.0 0.061 13.0 0.0 2.0 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 RKO86314.1 - 0.021 15.4 0.0 0.033 14.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 RKO86314.1 - 0.042 13.9 0.0 0.092 12.8 0.0 1.5 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain T2SSE PF00437.20 RKO86314.1 - 0.045 12.8 0.1 0.076 12.1 0.1 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein RsgA_GTPase PF03193.16 RKO86314.1 - 0.05 13.5 0.0 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase MeaB PF03308.16 RKO86314.1 - 0.052 12.5 0.1 0.087 11.8 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB MobB PF03205.14 RKO86314.1 - 0.061 13.2 0.1 0.13 12.2 0.1 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_15 PF13175.6 RKO86314.1 - 0.13 11.9 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain ATP-synt_ab PF00006.25 RKO86314.1 - 0.14 11.8 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_24 PF13479.6 RKO86314.1 - 0.15 11.8 0.1 0.49 10.1 0.1 2.0 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 RKO86314.1 - 0.16 11.9 0.2 0.46 10.4 0.0 1.8 2 0 0 2 2 2 0 NACHT domain AAA_5 PF07728.14 RKO86314.1 - 0.3 11.1 0.9 3.8 7.5 0.0 2.9 3 1 1 4 4 4 0 AAA domain (dynein-related subfamily) SAC3_GANP PF03399.16 RKO86318.1 - 1.3e-55 188.9 0.9 1.5e-55 188.7 0.9 1.0 1 0 0 1 1 1 1 SAC3/GANP family PLA2_B PF01735.18 RKO86319.1 - 0.0036 15.8 0.0 0.0048 15.4 0.0 1.1 1 0 0 1 1 1 1 Lysophospholipase catalytic domain zf_CCCH_4 PF18345.1 RKO86320.1 - 1.2e-09 37.8 24.0 0.0037 17.3 6.0 4.4 4 0 0 4 4 4 3 Zinc finger domain zf-CCCH PF00642.24 RKO86320.1 - 2.5e-09 36.8 22.5 0.0063 16.4 4.9 4.1 3 1 0 3 3 3 3 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 RKO86320.1 - 1e-08 34.7 20.9 0.0063 16.3 3.8 3.8 3 0 0 3 3 3 3 CCCH-type zinc finger zf-C3HC4 PF00097.25 RKO86320.1 - 2e-08 33.9 1.3 9.1e-08 31.9 1.3 2.2 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 RKO86320.1 - 7.2e-07 29.0 3.9 7.2e-07 29.0 3.9 3.3 4 1 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 RKO86320.1 - 3e-06 27.4 5.6 3e-06 27.4 5.6 3.2 3 1 0 3 3 3 1 Ring finger domain zf-RING_5 PF14634.6 RKO86320.1 - 5.4e-06 26.3 2.5 5.4e-06 26.3 2.5 2.7 3 1 0 3 3 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 RKO86320.1 - 2.7e-05 24.1 1.8 2.7e-05 24.1 1.8 3.2 3 0 0 3 3 3 1 RING-type zinc-finger zf-CCCH_2 PF14608.6 RKO86320.1 - 3.4e-05 24.2 21.1 0.18 12.3 3.0 4.4 4 1 0 4 4 3 3 RNA-binding, Nab2-type zinc finger zf-C3HC4_2 PF13923.6 RKO86320.1 - 0.0011 18.8 8.6 0.032 14.1 7.3 3.0 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 RKO86320.1 - 0.0039 17.3 4.0 0.0039 17.3 4.0 3.7 3 1 1 4 4 4 1 zinc finger of C3HC4-type, RING Inhibitor_I36 PF03995.13 RKO86320.1 - 0.015 15.2 0.2 0.015 15.2 0.2 2.3 3 0 0 3 3 3 0 Peptidase inhibitor family I36 Torus PF16131.5 RKO86320.1 - 0.023 15.4 14.8 2.4 8.9 0.8 3.3 2 1 1 3 3 3 0 Torus domain zf-RING_6 PF14835.6 RKO86320.1 - 0.13 12.1 3.9 0.58 10.1 1.0 2.7 2 0 0 2 2 2 0 zf-RING of BARD1-type protein zf-ANAPC11 PF12861.7 RKO86320.1 - 0.75 9.9 7.5 0.97 9.5 4.5 2.7 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 RKO86320.1 - 0.83 9.6 16.2 1.2 9.0 9.9 3.8 2 2 1 3 3 3 0 Prokaryotic RING finger family 4 Lustrin_cystein PF14625.6 RKO86320.1 - 1.7 9.1 7.8 6.7 7.2 0.5 3.3 2 1 1 3 3 3 0 Lustrin, cysteine-rich repeated domain RAB3GAP2_N PF14655.6 RKO86321.1 - 8.2e-57 193.3 0.0 1.1e-56 192.9 0.0 1.2 1 0 0 1 1 1 1 Rab3 GTPase-activating protein regulatory subunit N-terminus Nckap1 PF09735.9 RKO86322.1 - 2.3e-89 300.8 0.0 2.6e-89 300.6 0.0 1.0 1 0 0 1 1 1 1 Membrane-associated apoptosis protein S_4TM PF18159.1 RKO86322.1 - 0.09 12.1 0.2 0.21 10.8 0.2 1.5 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain IF-2B PF01008.17 RKO86324.1 - 4.2e-76 255.8 0.2 4.9e-76 255.6 0.2 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family DEAD PF00270.29 RKO86325.1 - 9.9e-44 149.2 0.0 1.6e-43 148.5 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO86325.1 - 7.2e-29 100.4 0.0 1.4e-28 99.4 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO86325.1 - 0.045 13.8 0.0 0.074 13.0 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit UTP25 PF06862.12 RKO86325.1 - 0.075 11.8 0.0 3 6.5 0.0 2.7 3 0 0 3 3 3 0 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 AAA_22 PF13401.6 RKO86325.1 - 0.17 12.2 0.0 1.9 8.7 0.0 2.3 2 0 0 2 2 2 0 AAA domain CCDC66 PF15236.6 RKO86327.1 - 0.0073 16.2 2.1 0.012 15.5 2.1 1.3 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 66 AXH PF08517.12 RKO86327.1 - 0.049 14.2 0.0 0.065 13.8 0.0 1.2 1 0 0 1 1 1 0 Ataxin-1 and HBP1 module (AXH) Arf PF00025.21 RKO86328.1 - 6.3e-25 87.6 0.2 6.7e-25 87.5 0.2 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 RKO86328.1 - 9.1e-07 29.1 0.1 1.2e-06 28.8 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Gtr1_RagA PF04670.12 RKO86328.1 - 2.5e-05 23.7 0.1 2.9e-05 23.5 0.1 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 RKO86328.1 - 0.00014 21.9 0.0 0.00022 21.3 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 RKO86328.1 - 0.00035 20.1 0.0 0.00039 19.9 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 RKO86328.1 - 0.0025 17.0 0.7 0.023 13.9 0.1 1.9 1 1 1 2 2 2 1 G-protein alpha subunit Ras PF00071.22 RKO86328.1 - 0.0047 16.5 0.0 0.0053 16.4 0.0 1.1 1 0 0 1 1 1 1 Ras family AAA_18 PF13238.6 RKO86328.1 - 0.015 15.8 0.0 0.017 15.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 RKO86328.1 - 0.02 14.3 0.0 0.021 14.2 0.0 1.1 1 0 0 1 1 1 0 Bacterial TniB protein PduV-EutP PF10662.9 RKO86328.1 - 0.028 14.2 0.0 0.034 13.9 0.0 1.1 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation ATPase_2 PF01637.18 RKO86328.1 - 0.093 12.6 0.0 0.093 12.6 0.0 1.1 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Acyltransferase PF01553.21 RKO86329.1 - 2.6e-33 114.5 0.1 3.5e-33 114.1 0.1 1.1 1 0 0 1 1 1 1 Acyltransferase Alk_phosphatase PF00245.20 RKO86329.1 - 0.0064 15.5 0.0 0.0082 15.1 0.0 1.1 1 0 0 1 1 1 1 Alkaline phosphatase FtsJ PF01728.19 RKO86334.1 - 3e-16 60.0 0.0 3.5e-16 59.8 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase FtsJ PF01728.19 RKO86335.1 - 1e-15 58.3 0.0 1.6e-15 57.7 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase DUF3288 PF11691.8 RKO86335.1 - 0.026 14.6 0.1 0.05 13.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3288) zf-H2C2_2 PF13465.6 RKO86338.1 - 1.5e-05 25.2 0.2 1.5e-05 25.2 0.2 1.8 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2 PF00096.26 RKO86338.1 - 0.0052 17.2 10.1 0.064 13.7 1.4 2.7 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO86338.1 - 2.9 9.0 9.5 1.8 9.6 0.7 3.1 3 0 0 3 3 3 0 C2H2-type zinc finger DnaJ PF00226.31 RKO86341.1 - 9.3e-18 64.1 0.0 1.5e-17 63.4 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain SET PF00856.28 RKO86342.1 - 8.7e-09 36.0 0.0 6.2e-08 33.2 0.0 2.3 2 1 0 2 2 2 1 SET domain zf-MYND PF01753.18 RKO86342.1 - 0.0029 17.7 7.4 0.0029 17.7 7.4 3.3 3 1 0 3 3 3 1 MYND finger zf-C3HC4 PF00097.25 RKO86342.1 - 0.0066 16.3 2.9 0.0066 16.3 2.9 3.0 4 0 0 4 4 4 1 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_9 PF14369.6 RKO86342.1 - 0.022 15.0 0.5 0.23 11.8 0.3 2.6 2 0 0 2 2 2 0 zinc-ribbon Mtr2 PF10429.9 RKO86342.1 - 0.054 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Nuclear pore RNA shuttling protein Mtr2 HypA PF01155.19 RKO86342.1 - 0.27 11.3 14.4 1.7 8.7 0.1 3.8 3 1 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-Mss51 PF13824.6 RKO86342.1 - 0.64 10.2 10.0 11 6.2 1.5 4.6 6 0 0 6 6 6 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-RING_2 PF13639.6 RKO86342.1 - 4.3 7.7 10.5 0.12 12.7 2.7 2.5 2 0 0 2 2 2 0 Ring finger domain Glyco_hydro_16 PF00722.21 RKO86347.1 - 3.2e-09 36.5 0.0 4e-09 36.2 0.0 1.3 1 1 0 1 1 1 1 Glycosyl hydrolases family 16 Carboxyl_trans PF01039.22 RKO86348.1 - 3.5e-146 487.7 0.1 4.3e-146 487.4 0.1 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 RKO86348.1 - 0.00031 20.3 0.1 0.75 9.2 0.0 2.2 2 0 0 2 2 2 2 Malonate decarboxylase gamma subunit (MdcE) MciZ PF13072.6 RKO86351.1 - 0.11 12.3 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Mother cell inhibitor of FtsZ TIMELESS_C PF05029.13 RKO86352.1 - 2.1e-19 70.1 0.0 2.1e-19 70.1 0.0 2.6 2 1 1 3 3 3 1 Timeless protein C terminal region MBDa PF16564.5 RKO86353.1 - 0.032 14.4 0.5 0.095 12.9 0.5 1.8 1 0 0 1 1 1 0 p55-binding region of Methyl-CpG-binding domain proteins MBD PPR PF01535.20 RKO86354.1 - 0.0003 20.8 0.0 15 6.1 0.0 4.3 5 0 0 5 5 5 2 PPR repeat PPR_2 PF13041.6 RKO86354.1 - 0.0086 16.2 0.0 6.9 6.9 0.0 3.5 3 0 0 3 3 3 1 PPR repeat family PPR_long PF17177.4 RKO86354.1 - 0.044 13.1 0.0 2.3 7.6 0.0 2.2 2 0 0 2 2 2 0 Pentacotripeptide-repeat region of PRORP TPR_14 PF13428.6 RKO86354.1 - 0.2 12.6 3.2 1.2 10.1 0.2 3.2 2 0 0 2 2 2 0 Tetratricopeptide repeat Lipase_GDSL_2 PF13472.6 RKO86355.1 - 3.9e-08 33.9 0.3 5e-08 33.5 0.3 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family PIF1 PF05970.14 RKO86357.1 - 5.3e-05 22.5 0.4 6e-05 22.4 0.4 1.1 1 0 0 1 1 1 1 PIF1-like helicase Radial_spoke PF04712.12 RKO86359.1 - 0.025 13.6 0.3 0.033 13.2 0.3 1.1 1 0 0 1 1 1 0 Radial spokehead-like protein DTHCT PF08070.11 RKO86359.1 - 0.091 13.5 16.1 0.083 13.6 12.4 2.3 2 0 0 2 2 2 0 DTHCT (NUC029) region Hamartin PF04388.12 RKO86359.1 - 0.2 10.3 9.2 0.26 9.9 9.2 1.1 1 0 0 1 1 1 0 Hamartin protein Ndc1_Nup PF09531.10 RKO86359.1 - 1.4 7.5 5.1 1.7 7.2 5.1 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Di19_C PF14571.6 RKO86359.1 - 3.4 8.2 6.3 9.7 6.8 6.3 1.8 1 0 0 1 1 1 0 Stress-induced protein Di19, C-terminal DMRL_synthase PF00885.19 RKO86360.1 - 4.1e-50 169.3 0.0 4.6e-50 169.1 0.0 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase ABC_membrane PF00664.23 RKO86361.1 - 1.8e-31 109.8 4.2 1.9e-31 109.7 4.2 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region LapA_dom PF06305.11 RKO86361.1 - 5.7 6.8 5.0 2 8.3 0.8 2.3 2 1 1 3 3 3 0 Lipopolysaccharide assembly protein A domain NUDIX_2 PF13869.6 RKO86362.1 - 8.4e-09 35.3 0.1 1.3e-08 34.7 0.1 1.3 1 0 0 1 1 1 1 Nucleotide hydrolase ABC_membrane PF00664.23 RKO86365.1 - 1.5e-30 106.8 5.0 2.4e-30 106.1 5.0 1.3 1 1 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 RKO86365.1 - 6.3e-10 39.7 0.0 1e-09 39.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter Dynamin_N PF00350.23 RKO86365.1 - 0.0013 18.8 0.2 0.0021 18.1 0.2 1.3 1 0 0 1 1 1 1 Dynamin family RsgA_GTPase PF03193.16 RKO86365.1 - 0.0015 18.5 0.9 0.0023 17.8 0.1 1.6 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 RKO86365.1 - 0.0024 18.0 0.3 0.0041 17.2 0.3 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_29 PF13555.6 RKO86365.1 - 0.0036 17.0 0.1 0.0076 16.0 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 RKO86365.1 - 0.034 14.0 0.6 0.063 13.1 0.6 1.4 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 RKO86365.1 - 0.039 13.4 0.1 0.063 12.7 0.1 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.9 RKO86365.1 - 0.039 12.8 0.0 0.056 12.2 0.0 1.1 1 0 0 1 1 1 0 Predicted ATPase of the ABC class FtsK_SpoIIIE PF01580.18 RKO86365.1 - 0.044 13.1 0.2 0.075 12.4 0.2 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_23 PF13476.6 RKO86365.1 - 0.046 14.2 0.3 0.083 13.4 0.3 1.3 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 RKO86365.1 - 0.1 12.2 0.4 0.16 11.6 0.4 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Auxin_canalis PF05703.11 RKO86366.1 - 0.013 15.4 1.1 0.025 14.5 1.1 1.4 1 0 0 1 1 1 0 Auxin canalisation Sec63 PF02889.16 RKO86367.1 - 1.1e-47 162.4 0.0 6.2e-47 159.9 0.0 1.9 1 1 0 1 1 1 1 Sec63 Brl domain Helicase_C PF00271.31 RKO86367.1 - 7.1e-09 36.0 0.0 2.5e-08 34.3 0.0 1.9 1 1 0 1 1 1 1 Helicase conserved C-terminal domain YjeF_N PF03853.15 RKO86369.1 - 1.4e-15 57.6 0.0 1.9e-15 57.2 0.0 1.2 1 0 0 1 1 1 1 YjeF-related protein N-terminus Ribosomal_60s PF00428.19 RKO86369.1 - 0.17 12.5 0.9 0.26 11.9 0.9 1.2 1 0 0 1 1 1 0 60s Acidic ribosomal protein TIP49 PF06068.13 RKO86370.1 - 1.6e-171 570.2 0.2 1.9e-171 570.0 0.2 1.0 1 0 0 1 1 1 1 TIP49 P-loop domain AAA PF00004.29 RKO86370.1 - 4.2e-10 40.1 0.1 3.3e-06 27.6 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 RKO86370.1 - 1e-09 38.4 0.0 1.1e-06 28.5 0.0 2.4 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain TIP49_C PF17856.1 RKO86370.1 - 1.9e-06 27.9 0.0 5.9e-06 26.3 0.0 1.9 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA_22 PF13401.6 RKO86370.1 - 2.9e-06 27.6 0.0 0.069 13.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_28 PF13521.6 RKO86370.1 - 0.00025 21.3 0.0 0.00044 20.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 RKO86370.1 - 0.00043 20.7 0.5 1.1 9.6 0.2 2.4 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 RKO86370.1 - 0.00043 20.7 0.0 0.0033 17.8 0.0 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 RKO86370.1 - 0.00082 19.4 0.1 0.041 13.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 RKO86370.1 - 0.0012 19.4 0.0 0.0056 17.2 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 RKO86370.1 - 0.0012 18.4 0.5 0.0024 17.5 0.3 1.6 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 RKO86370.1 - 0.002 17.6 0.2 0.061 12.7 0.1 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 RKO86370.1 - 0.0029 17.3 0.1 1.7 8.3 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain Zeta_toxin PF06414.12 RKO86370.1 - 0.01 15.1 0.3 0.033 13.5 0.2 1.8 2 0 0 2 2 2 0 Zeta toxin ResIII PF04851.15 RKO86370.1 - 0.011 15.7 0.0 0.35 10.8 0.0 2.3 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit ATPase PF06745.13 RKO86370.1 - 0.013 14.9 0.2 0.12 11.7 0.0 2.2 2 0 0 2 2 2 0 KaiC DnaB_C PF03796.15 RKO86370.1 - 0.016 14.5 0.0 0.032 13.6 0.0 1.5 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain IstB_IS21 PF01695.17 RKO86370.1 - 0.048 13.4 0.1 0.1 12.3 0.1 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_33 PF13671.6 RKO86370.1 - 0.051 13.7 0.0 0.25 11.5 0.0 2.1 3 0 0 3 3 2 0 AAA domain AAA_7 PF12775.7 RKO86370.1 - 0.055 13.0 0.1 0.25 10.8 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region PIF1 PF05970.14 RKO86370.1 - 0.12 11.6 0.0 8.8 5.4 0.0 2.3 2 0 0 2 2 2 0 PIF1-like helicase DUF2075 PF09848.9 RKO86370.1 - 0.12 11.5 0.0 0.19 11.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Glyco_hydro_2_N PF02837.18 RKO86371.1 - 0.0016 18.4 0.0 0.004 17.1 0.0 1.7 1 0 0 1 1 1 1 Glycosyl hydrolases family 2, sugar binding domain DUF2407_C PF13373.6 RKO86372.1 - 7.5e-14 52.1 7.0 1.1e-12 48.3 7.0 2.2 1 1 0 1 1 1 1 DUF2407 C-terminal domain DUF2407 PF10302.9 RKO86372.1 - 1.1e-05 25.9 0.0 1.6e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 DUF2407 ubiquitin-like domain ubiquitin PF00240.23 RKO86372.1 - 1.3e-05 24.8 0.0 3e-05 23.7 0.0 1.5 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD_2 PF13881.6 RKO86372.1 - 2.7e-05 24.2 0.0 4.4e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Kelch_4 PF13418.6 RKO86374.1 - 2.3e-11 43.5 9.2 5.6e-09 35.9 0.2 4.2 2 2 0 3 3 3 2 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO86374.1 - 6.3e-05 23.1 0.8 0.15 12.4 0.0 3.9 3 0 0 3 3 3 1 Kelch motif Kelch_5 PF13854.6 RKO86374.1 - 7.4e-05 22.6 0.7 0.3 11.1 0.0 3.0 2 1 0 2 2 2 2 Kelch motif Kelch_1 PF01344.25 RKO86374.1 - 0.0026 17.3 0.9 3.4 7.3 0.0 3.7 3 0 0 3 3 3 2 Kelch motif Meiotic_rec114 PF03525.14 RKO86376.1 - 0.47 9.4 0.0 0.47 9.4 0.0 1.8 1 1 0 2 2 2 0 Meiotic recombination protein rec114 TPR_12 PF13424.6 RKO86379.1 - 8.3e-13 48.4 1.4 0.00085 19.6 0.2 3.2 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.6 RKO86379.1 - 9.6e-11 41.0 0.4 0.11 12.8 0.0 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 RKO86379.1 - 2.5e-10 39.7 0.6 0.042 13.7 0.0 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 RKO86379.1 - 3.2e-10 39.3 0.6 0.077 13.1 0.2 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 RKO86379.1 - 6.9e-07 29.0 0.7 0.09 12.7 0.3 3.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 RKO86379.1 - 9.3e-06 25.3 2.2 0.34 11.0 0.0 4.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_11 PF13414.6 RKO86379.1 - 0.00049 19.7 1.6 0.4 10.4 0.4 3.4 3 0 0 3 3 3 2 TPR repeat TPR_19 PF14559.6 RKO86379.1 - 0.001 19.5 0.5 7.5 7.1 0.9 3.5 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO86379.1 - 0.015 15.9 4.0 2.8 8.7 1.6 3.6 3 1 0 3 3 3 0 Tetratricopeptide repeat TPR_17 PF13431.6 RKO86379.1 - 0.017 15.5 0.2 6.4 7.4 0.2 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF4810 PF16068.5 RKO86379.1 - 0.028 14.9 0.8 0.2 12.2 0.0 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4810) TPR_6 PF13174.6 RKO86379.1 - 0.072 13.8 1.0 51 4.8 0.0 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF463 PF04317.12 RKO86379.1 - 0.08 11.9 0.0 0.11 11.4 0.0 1.3 1 0 0 1 1 1 0 YcjX-like family, DUF463 TPR_3 PF07720.12 RKO86379.1 - 0.11 12.5 1.8 7.5 6.7 0.2 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat SNARE_assoc PF09335.11 RKO86380.1 - 8.3e-13 48.9 7.1 1.3e-12 48.3 7.1 1.3 1 0 0 1 1 1 1 SNARE associated Golgi protein Myb_DNA-binding PF00249.31 RKO86381.1 - 6.5e-07 29.5 0.4 6.5e-07 29.5 0.4 3.1 3 1 0 3 3 3 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO86381.1 - 1.9e-05 24.8 3.1 0.00055 20.1 0.3 2.7 2 1 0 2 2 2 2 Myb-like DNA-binding domain Glyco_transf_43 PF03360.16 RKO86383.1 - 0.026 14.3 0.0 0.039 13.8 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase family 43 WW PF00397.26 RKO86384.1 - 5.4e-35 119.1 13.9 7.3e-12 45.2 2.0 3.5 3 0 0 3 3 3 3 WW domain HECT PF00632.25 RKO86384.1 - 2e-19 70.2 0.5 3.1e-19 69.6 0.5 1.3 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) C2 PF00168.30 RKO86384.1 - 5.2e-17 62.0 0.3 1.3e-16 60.7 0.2 1.7 1 1 0 1 1 1 1 C2 domain SUI1 PF01253.22 RKO86385.1 - 5.1e-22 78.2 0.2 5.1e-22 78.2 0.2 1.7 1 1 1 2 2 2 1 Translation initiation factor SUI1 DUF4710 PF15828.5 RKO86385.1 - 0.052 13.7 4.2 0.094 12.8 4.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) NmrA PF05368.13 RKO86387.1 - 1.9e-09 37.4 0.0 2.7e-09 36.9 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family DUF1681 PF07933.14 RKO86388.1 - 1.1e-13 51.2 0.0 1.2e-13 51.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1681) HMMR_N PF15905.5 RKO86389.1 - 0.00026 20.6 2.4 0.00026 20.6 2.4 9.4 4 2 2 7 7 7 2 Hyaluronan mediated motility receptor N-terminal Pox_A_type_inc PF04508.12 RKO86389.1 - 0.0023 17.7 7.5 19 5.3 0.6 6.9 4 0 0 4 4 4 3 Viral A-type inclusion protein repeat Filament PF00038.21 RKO86389.1 - 0.005 16.5 11.0 0.005 16.5 11.0 7.8 3 3 3 7 7 7 4 Intermediate filament protein COMP PF11598.8 RKO86389.1 - 4 8.0 7.7 4.2 7.9 0.8 4.0 4 0 0 4 4 4 0 Cartilage oligomeric matrix protein AAA_5 PF07728.14 RKO86390.1 - 5.3e-53 178.7 0.0 1.2e-34 119.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 RKO86390.1 - 2.2e-05 24.9 0.0 0.72 10.2 0.0 3.3 2 1 0 2 2 2 2 AAA ATPase domain IstB_IS21 PF01695.17 RKO86390.1 - 0.0006 19.6 0.0 0.088 12.5 0.0 2.3 2 0 0 2 2 2 1 IstB-like ATP binding protein Mg_chelatase PF01078.21 RKO86390.1 - 0.0011 18.4 0.1 0.099 12.0 0.0 3.3 4 0 0 4 4 4 1 Magnesium chelatase, subunit ChlI AAA PF00004.29 RKO86390.1 - 0.033 14.6 0.0 0.26 11.7 0.0 2.4 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 RKO86390.1 - 0.065 13.5 0.1 0.25 11.6 0.0 2.0 2 1 0 2 2 2 0 AAA domain AAA_7 PF12775.7 RKO86390.1 - 0.098 12.2 0.0 0.33 10.4 0.0 1.8 2 0 0 2 2 2 0 P-loop containing dynein motor region Sigma54_activ_2 PF14532.6 RKO86390.1 - 0.12 12.5 0.0 26 4.9 0.0 2.5 2 1 0 2 2 2 0 Sigma-54 interaction domain DNA_pol3_delta2 PF13177.6 RKO86390.1 - 0.14 11.9 0.1 8 6.2 0.0 2.8 3 0 0 3 3 3 0 DNA polymerase III, delta subunit F-box_4 PF15966.5 RKO86393.1 - 1.3e-05 25.1 0.1 2e-05 24.4 0.1 1.3 1 0 0 1 1 1 1 F-box F-box-like PF12937.7 RKO86393.1 - 2.5e-05 24.0 0.1 5.2e-05 23.0 0.1 1.5 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO86393.1 - 0.00089 19.1 0.1 0.0018 18.1 0.1 1.5 1 0 0 1 1 1 1 F-box domain Cu-oxidase PF00394.22 RKO86394.1 - 7.2e-09 36.0 0.0 1.4e-08 35.0 0.0 1.4 1 0 0 1 1 1 1 Multicopper oxidase MCLC PF05934.11 RKO86395.1 - 0.023 13.4 4.8 0.026 13.3 4.8 1.0 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) Zip PF02535.22 RKO86395.1 - 4.8 6.3 5.8 4.8 6.3 5.8 1.0 1 0 0 1 1 1 0 ZIP Zinc transporter ADH_zinc_N_2 PF13602.6 RKO86398.1 - 2.8e-20 73.7 0.0 4e-20 73.2 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 RKO86398.1 - 3.6e-16 59.3 0.1 1.3e-15 57.6 0.0 1.8 1 1 1 2 2 2 1 Zinc-binding dehydrogenase EB PF01683.18 RKO86401.1 - 0.046 14.0 2.6 2.8 8.3 2.6 2.3 1 1 0 1 1 1 0 EB module Asp PF00026.23 RKO86402.1 - 3.8e-48 164.5 10.2 4.6e-48 164.3 10.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO86402.1 - 0.00052 20.3 9.2 0.0084 16.4 5.4 3.1 1 1 0 2 2 2 1 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 RKO86402.1 - 0.013 16.2 2.1 6.1 7.6 0.0 3.0 3 0 0 3 3 3 0 Aspartyl protease DZF PF07528.14 RKO86403.1 - 0.043 13.4 0.9 0.056 13.1 0.9 1.2 1 0 0 1 1 1 0 DZF domain APC_r PF05923.12 RKO86403.1 - 0.081 12.7 0.3 17 5.3 0.2 2.6 2 0 0 2 2 2 0 APC repeat Bul1_N PF04425.12 RKO86403.1 - 0.11 11.2 0.4 0.15 10.8 0.4 1.1 1 0 0 1 1 1 0 Bul1 N terminus GBP_C PF02841.14 RKO86403.1 - 3.9 6.8 16.1 5.3 6.3 16.1 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain zf-MYND PF01753.18 RKO86404.1 - 1.1e-06 28.6 8.9 1.1e-06 28.6 8.9 2.2 2 0 0 2 2 2 1 MYND finger zf-C6H2 PF15801.5 RKO86404.1 - 1.1 9.6 11.8 1.4 9.3 6.9 3.3 4 0 0 4 4 4 0 zf-MYND-like zinc finger, mRNA-binding Ribosomal_L39 PF00832.20 RKO86405.1 - 0.16 11.7 0.5 0.45 10.2 0.1 1.9 2 0 0 2 2 2 0 Ribosomal L39 protein EF-hand_1 PF00036.32 RKO86408.1 - 0.23 11.1 0.3 0.39 10.4 0.3 1.4 1 0 0 1 1 1 0 EF hand EF-hand_6 PF13405.6 RKO86408.1 - 0.3 11.1 1.4 0.51 10.4 0.9 1.7 2 0 0 2 2 2 0 EF-hand domain GTP_cyclohydroI PF01227.22 RKO86410.1 - 1e-57 194.4 0.0 1.5e-57 193.9 0.0 1.2 1 0 0 1 1 1 1 GTP cyclohydrolase I QueF PF14489.6 RKO86410.1 - 0.0045 17.1 0.0 0.0078 16.3 0.0 1.4 1 0 0 1 1 1 1 QueF-like protein ArgoL2 PF16488.5 RKO86412.1 - 1.9e-07 31.3 0.0 7.9e-07 29.3 0.0 2.0 2 0 0 2 2 2 1 Argonaute linker 2 domain ArgoMid PF16487.5 RKO86412.1 - 5.2e-06 26.6 0.1 1.1e-05 25.6 0.1 1.4 1 0 0 1 1 1 1 Mid domain of argonaute TMP-TENI PF02581.17 RKO86413.1 - 7.2e-17 61.3 0.0 8.6e-17 61.0 0.0 1.2 1 0 0 1 1 1 1 Thiamine monophosphate synthase Tom37 PF10568.9 RKO86414.1 - 2.8e-23 82.6 0.0 4.9e-23 81.8 0.0 1.4 1 0 0 1 1 1 1 Outer mitochondrial membrane transport complex protein GST_C_6 PF17171.4 RKO86414.1 - 5.6e-19 67.7 0.1 2.8e-18 65.5 0.0 2.3 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_4 PF17172.4 RKO86414.1 - 2e-16 60.6 0.0 3.2e-16 59.9 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase N-terminal domain GST_C_2 PF13410.6 RKO86414.1 - 3.9e-07 30.0 0.1 1.6e-06 28.0 0.0 2.0 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 RKO86414.1 - 0.048 13.8 0.0 0.11 12.7 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain RCC1 PF00415.18 RKO86418.1 - 7.2e-11 42.5 3.9 2.9e-05 24.6 2.1 2.4 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat PALP PF00291.25 RKO86419.1 - 7.8e-35 120.7 0.1 8.9e-35 120.5 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Kelch_5 PF13854.6 RKO86420.1 - 2.9e-14 52.7 2.5 3e-05 23.9 0.3 5.3 5 0 0 5 5 5 3 Kelch motif Kelch_6 PF13964.6 RKO86420.1 - 1.5e-13 50.5 2.8 0.0022 18.2 1.0 5.8 5 0 0 5 5 5 3 Kelch motif Kelch_1 PF01344.25 RKO86420.1 - 8.4e-09 34.9 2.2 0.019 14.6 1.1 5.0 5 0 0 5 5 5 3 Kelch motif Kelch_4 PF13418.6 RKO86420.1 - 2.9e-07 30.4 15.8 0.00018 21.4 1.0 5.0 6 0 0 6 6 6 3 Galactose oxidase, central domain Kelch_3 PF13415.6 RKO86420.1 - 2.5e-05 24.4 3.1 0.16 12.3 0.7 4.8 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_2 PF07646.15 RKO86420.1 - 0.0022 17.9 2.1 6.4 6.9 0.1 5.1 6 0 0 6 6 6 1 Kelch motif Totivirus_coat PF05518.11 RKO86421.1 - 3.1 5.7 6.6 4.3 5.3 6.6 1.1 1 0 0 1 1 1 0 Totivirus coat protein UBX PF00789.20 RKO86422.1 - 2.3e-15 56.5 0.0 7.6e-14 51.7 0.0 2.3 2 0 0 2 2 2 2 UBX domain Orthopox_A5L PF06193.11 RKO86425.1 - 0.026 14.0 0.1 0.037 13.5 0.1 1.2 1 0 0 1 1 1 0 Orthopoxvirus A5L protein-like Metallopep PF12044.8 RKO86426.1 - 3.1e-111 372.0 0.0 4.1e-111 371.6 0.0 1.1 1 0 0 1 1 1 1 Putative peptidase family Reprolysin_3 PF13582.6 RKO86426.1 - 0.16 12.5 0.0 0.29 11.6 0.0 1.4 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Peptidase_M66 PF10462.9 RKO86426.1 - 0.19 10.7 0.3 0.31 9.9 0.3 1.2 1 0 0 1 1 1 0 Peptidase M66 Ion_trans_2 PF07885.16 RKO86427.1 - 6.7e-15 54.8 6.4 1.5e-14 53.7 6.4 1.6 1 0 0 1 1 1 1 Ion channel ABC_tran PF00005.27 RKO86428.1 - 3.3e-25 89.2 0.0 5.1e-25 88.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC2_membrane PF01061.24 RKO86428.1 - 9.8e-08 31.7 2.2 9.8e-08 31.7 2.2 2.3 3 0 0 3 3 3 1 ABC-2 type transporter AAA_21 PF13304.6 RKO86428.1 - 8.7e-06 25.8 0.8 0.094 12.5 0.0 2.4 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system COesterase PF00135.28 RKO86428.1 - 0.00043 19.3 0.0 0.00078 18.4 0.0 1.4 1 0 0 1 1 1 1 Carboxylesterase family RsgA_GTPase PF03193.16 RKO86428.1 - 0.004 17.1 0.0 0.008 16.1 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 RKO86428.1 - 0.0059 16.3 0.4 0.029 14.1 0.1 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.6 RKO86428.1 - 0.011 16.0 0.0 0.023 15.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain ABC2_membrane_3 PF12698.7 RKO86428.1 - 0.014 14.5 4.7 0.026 13.6 4.7 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein SMC_N PF02463.19 RKO86428.1 - 0.03 13.7 0.1 4.9 6.5 0.0 2.6 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 RKO86428.1 - 0.051 14.1 0.1 0.081 13.4 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 RKO86428.1 - 0.054 13.9 0.0 0.11 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_28 PF13521.6 RKO86428.1 - 0.1 12.8 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 RKO86428.1 - 0.13 12.3 0.2 0.22 11.6 0.2 1.2 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_18 PF13238.6 RKO86428.1 - 0.14 12.7 0.0 0.27 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 RKO86429.1 - 2.2e-41 141.3 0.0 4.1e-41 140.5 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_ID_OB PF16450.5 RKO86429.1 - 3e-10 39.9 0.0 6.3e-10 38.9 0.0 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_lid_3 PF17862.1 RKO86429.1 - 1.4e-08 34.4 0.5 2.6e-08 33.5 0.5 1.4 1 0 0 1 1 1 1 AAA+ lid domain AAA_22 PF13401.6 RKO86429.1 - 6.6e-06 26.4 0.3 0.002 18.4 0.3 2.4 1 1 0 1 1 1 1 AAA domain AAA_2 PF07724.14 RKO86429.1 - 8.1e-06 26.1 0.0 1.7e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) DUF815 PF05673.13 RKO86429.1 - 4.4e-05 22.8 0.0 7.8e-05 21.9 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) RuvB_N PF05496.12 RKO86429.1 - 0.00058 19.6 0.0 0.0011 18.7 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 RKO86429.1 - 0.00084 19.3 0.2 0.0042 17.1 0.2 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 RKO86429.1 - 0.0014 19.1 0.1 0.032 14.6 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain AAA_18 PF13238.6 RKO86429.1 - 0.0022 18.6 0.0 0.0048 17.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.6 RKO86429.1 - 0.0023 18.2 0.5 0.0059 16.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.6 RKO86429.1 - 0.018 15.1 0.0 0.037 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 RKO86429.1 - 0.021 15.0 0.0 0.041 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_3 PF07726.11 RKO86429.1 - 0.021 14.7 0.0 0.064 13.1 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 RKO86429.1 - 0.027 14.2 0.0 0.052 13.3 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein ATPase PF06745.13 RKO86429.1 - 0.073 12.4 0.2 0.68 9.2 0.0 2.4 2 1 1 3 3 3 0 KaiC DMRL_synthase PF00885.19 RKO86429.1 - 0.09 12.6 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 6,7-dimethyl-8-ribityllumazine synthase RNA_helicase PF00910.22 RKO86429.1 - 0.11 12.9 0.0 0.26 11.7 0.0 1.7 1 0 0 1 1 1 0 RNA helicase TIP49 PF06068.13 RKO86429.1 - 0.11 11.7 0.0 0.18 10.9 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain Mg_chelatase PF01078.21 RKO86429.1 - 0.12 11.8 0.0 0.22 10.9 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 RKO86429.1 - 4 7.1 4.9 0.58 9.8 0.2 2.1 2 1 0 2 2 1 0 AAA domain WD40 PF00400.32 RKO86430.1 - 8.2e-19 67.6 0.7 1.2e-05 25.9 0.3 5.8 6 0 0 6 6 6 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO86430.1 - 7.4e-06 26.2 0.9 0.16 12.3 0.1 2.8 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO86430.1 - 0.00033 19.4 0.2 0.49 9.0 0.0 2.6 2 1 0 2 2 2 2 Nucleoporin Nup120/160 Choline_sulf_C PF12411.8 RKO86430.1 - 0.12 12.2 0.1 50 3.8 0.0 3.4 3 0 0 3 3 3 0 Choline sulfatase enzyme C terminal ThiS PF02597.20 RKO86431.1 - 1.4e-14 54.5 0.0 1.8e-14 54.1 0.0 1.1 1 0 0 1 1 1 1 ThiS family PB1 PF00564.24 RKO86431.1 - 0.044 13.7 0.0 0.056 13.4 0.0 1.2 1 0 0 1 1 1 0 PB1 domain TatD_DNase PF01026.21 RKO86432.1 - 6.2e-45 153.6 0.0 7e-45 153.4 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase Amidohydro_2 PF04909.14 RKO86432.1 - 0.00014 21.7 1.4 0.02 14.7 1.4 2.9 1 1 0 1 1 1 1 Amidohydrolase RFX_DNA_binding PF02257.15 RKO86433.1 - 0.03 15.0 0.0 0.049 14.3 0.0 1.3 1 0 0 1 1 1 0 RFX DNA-binding domain RCC1 PF00415.18 RKO86434.1 - 6.5e-24 84.3 2.5 1.4e-05 25.6 0.2 5.4 5 0 0 5 5 5 4 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 RKO86434.1 - 3e-09 36.4 13.5 1.5e-08 34.2 0.1 4.7 6 0 0 6 6 6 2 Regulator of chromosome condensation (RCC1) repeat Helicase_C PF00271.31 RKO86436.1 - 8.3e-12 45.4 0.0 1e-11 45.2 0.0 1.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SNF2_N PF00176.23 RKO86437.1 - 5e-17 61.6 0.1 5.5e-17 61.5 0.1 1.0 1 0 0 1 1 1 1 SNF2 family N-terminal domain tRNA-synt_2 PF00152.20 RKO86438.1 - 1.6e-75 254.1 0.5 2.6e-75 253.4 0.5 1.3 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2b PF00587.25 RKO86439.1 - 3.9e-28 98.6 0.0 5.7e-28 98.1 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 RKO86439.1 - 1.4e-11 44.3 0.0 2.4e-11 43.6 0.0 1.4 1 0 0 1 1 1 1 Anticodon binding domain UPF0029 PF01205.19 RKO86440.1 - 1.7e-17 63.6 0.0 1.7e-17 63.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 TT_ORF2 PF02957.15 RKO86441.1 - 0.54 11.2 2.7 1 10.3 2.7 1.5 1 0 0 1 1 1 0 TT viral ORF2 TPR_14 PF13428.6 RKO86442.1 - 1.3e-11 44.3 1.8 0.009 16.8 0.0 6.4 4 3 3 7 7 7 2 Tetratricopeptide repeat Suf PF05843.14 RKO86442.1 - 1.4e-07 31.8 8.6 3.8e-05 23.8 0.7 4.2 1 1 2 3 3 3 2 Suppressor of forked protein (Suf) TPR_6 PF13174.6 RKO86442.1 - 6.2e-06 26.5 0.3 0.098 13.3 0.0 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO86442.1 - 8.6e-06 26.2 0.1 0.32 11.5 0.0 3.8 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO86442.1 - 0.0042 17.7 0.0 0.89 10.3 0.0 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_15 PF13429.6 RKO86442.1 - 0.0083 15.4 0.4 0.39 9.9 0.0 3.3 2 2 1 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 RKO86442.1 - 0.0092 16.0 0.1 14 6.1 0.0 3.9 3 0 0 3 3 3 1 Tetratricopeptide repeat Cactin_mid PF10312.9 RKO86442.1 - 0.072 12.8 1.8 2.2 8.0 0.1 2.9 2 1 1 3 3 3 0 Conserved mid region of cactin Mei4 PF13971.6 RKO86442.1 - 0.13 11.8 0.1 0.29 10.6 0.0 1.5 2 0 0 2 2 2 0 Meiosis-specific protein Mei4 Aminotran_5 PF00266.19 RKO86443.1 - 6.3e-53 180.0 0.0 4.1e-44 151.0 0.0 2.0 2 0 0 2 2 2 2 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 RKO86443.1 - 7.3e-08 31.3 0.0 1.1e-07 30.7 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 RKO86443.1 - 8.9e-07 28.4 0.0 1.3e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 RKO86443.1 - 6.5e-06 25.7 0.1 8.8e-06 25.3 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family SPRY PF00622.28 RKO86445.1 - 5.7e-25 87.8 0.8 8.8e-25 87.2 0.8 1.3 1 0 0 1 1 1 1 SPRY domain CLTH PF10607.9 RKO86445.1 - 2.8e-13 50.0 0.0 1.2e-05 25.3 0.0 2.2 2 0 0 2 2 2 2 CTLH/CRA C-terminal to LisH motif domain LisH PF08513.11 RKO86445.1 - 3.1e-05 23.8 0.1 8.3e-05 22.4 0.1 1.7 1 0 0 1 1 1 1 LisH zf-CCCH PF00642.24 RKO86446.1 - 1.9e-09 37.2 3.1 1.9e-09 37.2 3.1 2.3 3 0 0 3 3 3 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-C3HC4_3 PF13920.6 RKO86446.1 - 1.2e-08 34.7 8.0 2.5e-08 33.6 8.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 RKO86446.1 - 1.2e-06 28.3 11.3 1.2e-06 28.3 11.3 1.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 RKO86446.1 - 3.2e-06 27.0 11.6 6.3e-06 26.0 11.6 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_2 PF13639.6 RKO86446.1 - 1.7e-05 25.0 10.9 1.7e-05 25.0 10.9 1.8 2 0 0 2 2 2 1 Ring finger domain zf_CCCH_4 PF18345.1 RKO86446.1 - 2e-05 24.5 5.2 2e-05 24.5 5.2 2.6 3 0 0 3 3 3 1 Zinc finger domain zf-C3HC4 PF00097.25 RKO86446.1 - 2.8e-05 23.9 11.7 2.8e-05 23.9 11.7 1.6 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_10 PF16685.5 RKO86446.1 - 0.00013 22.0 4.9 0.00013 22.0 4.9 1.9 2 0 0 2 2 2 1 zinc RING finger of MSL2 zf-RING_UBOX PF13445.6 RKO86446.1 - 0.00024 21.0 11.7 0.00057 19.9 11.7 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_4 PF15227.6 RKO86446.1 - 0.0069 16.5 9.0 0.0069 16.5 9.0 2.0 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING FYVE_2 PF02318.16 RKO86446.1 - 0.0077 16.4 0.6 0.011 15.9 0.6 1.3 1 0 0 1 1 1 1 FYVE-type zinc finger Prok-RING_4 PF14447.6 RKO86446.1 - 0.01 15.6 10.2 0.02 14.7 10.2 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-CCCH_2 PF14608.6 RKO86446.1 - 0.031 14.8 2.4 0.031 14.8 2.4 2.7 3 0 0 3 3 3 0 RNA-binding, Nab2-type zinc finger zf-P11 PF03854.14 RKO86446.1 - 0.07 12.8 5.2 0.21 11.3 5.2 1.8 1 0 0 1 1 1 0 P-11 zinc finger zf-CCCH_4 PF18044.1 RKO86446.1 - 0.27 11.1 18.7 0.22 11.4 8.2 3.1 2 1 0 2 2 2 0 CCCH-type zinc finger zf-RING_6 PF14835.6 RKO86446.1 - 0.4 10.6 4.4 0.8 9.6 4.4 1.5 1 0 0 1 1 1 0 zf-RING of BARD1-type protein RRM_1 PF00076.22 RKO86448.1 - 2.2e-10 40.2 3.4 0.006 16.4 0.0 3.6 3 1 1 4 4 4 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 RKO86448.1 - 0.099 12.7 0.0 5.7 7.1 0.0 2.5 2 0 0 2 2 2 0 Limkain b1 Filament_head PF04732.14 RKO86448.1 - 9 7.3 25.2 6 7.8 6.9 2.6 2 0 0 2 2 2 0 Intermediate filament head (DNA binding) region FIBP PF05427.11 RKO86449.1 - 6.3e-68 229.7 0.0 7.3e-68 229.5 0.0 1.0 1 0 0 1 1 1 1 Acidic fibroblast growth factor binding (FIBP) Pkinase PF00069.25 RKO86450.1 - 6.4e-18 65.1 0.0 8.2e-18 64.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO86450.1 - 1e-05 25.0 0.0 1.3e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO86450.1 - 0.003 17.5 0.0 0.0049 16.8 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family zf-C2H2_4 PF13894.6 RKO86451.1 - 0.0008 20.0 5.6 0.19 12.6 0.7 2.3 2 1 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO86451.1 - 0.0025 18.1 9.9 0.014 15.8 0.3 2.9 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2 PF00096.26 RKO86451.1 - 0.0066 16.8 1.2 0.0066 16.8 1.2 3.1 3 0 0 3 3 3 1 Zinc finger, C2H2 type zf-C2H2_aberr PF17017.5 RKO86451.1 - 0.017 15.3 1.1 0.34 11.0 0.1 2.0 2 0 0 2 2 2 0 Aberrant zinc-finger zf-nanos PF05741.13 RKO86451.1 - 0.04 14.1 0.2 0.066 13.4 0.1 1.5 1 1 0 1 1 1 0 Nanos RNA binding domain zf-C2H2_jaz PF12171.8 RKO86451.1 - 0.062 13.6 0.5 0.062 13.6 0.5 2.6 4 0 0 4 4 4 0 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 RKO86451.1 - 0.19 12.2 0.4 0.19 12.2 0.4 2.6 4 0 0 4 4 4 0 Zinc-finger of C2H2 type Proteasome PF00227.26 RKO86452.1 - 1.1e-18 67.4 0.2 1.2e-18 67.3 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit UBZ_FAAP20 PF15750.5 RKO86453.1 - 0.012 15.6 0.1 0.024 14.6 0.1 1.5 1 0 0 1 1 1 0 Ubiquitin-binding zinc-finger Zn-C2H2_12 PF18112.1 RKO86453.1 - 0.029 14.8 0.3 0.05 14.1 0.3 1.4 1 0 0 1 1 1 0 Autophagy receptor zinc finger-C2H2 domain Rad50_zn_hook PF04423.14 RKO86453.1 - 0.075 12.9 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Rad50 zinc hook motif MCM_N PF14551.6 RKO86454.1 - 4.2e-14 53.0 1.5 6.2e-14 52.4 1.5 1.3 1 0 0 1 1 1 1 MCM N-terminal domain EphA2_TM PF14575.6 RKO86455.1 - 0.031 15.1 0.0 0.061 14.2 0.0 1.5 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain AJAP1_PANP_C PF15298.6 RKO86455.1 - 10 6.3 11.5 0.33 11.1 5.5 1.5 2 0 0 2 2 2 0 AJAP1/PANP C-terminus zf-MYND PF01753.18 RKO86456.1 - 6.2e-08 32.6 8.3 1.2e-07 31.7 8.3 1.4 1 0 0 1 1 1 1 MYND finger TPR_7 PF13176.6 RKO86456.1 - 0.058 13.4 0.2 0.13 12.4 0.2 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat F-box PF00646.33 RKO86457.1 - 1.4e-06 28.0 1.0 3.7e-06 26.7 1.0 1.8 1 0 0 1 1 1 1 F-box domain F-box-like PF12937.7 RKO86457.1 - 2.5e-05 24.1 0.6 0.00013 21.7 0.2 2.4 2 0 0 2 2 2 1 F-box-like TPT PF03151.16 RKO86459.1 - 9.7e-63 212.2 8.6 1.7e-62 211.4 8.6 1.3 1 1 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 RKO86459.1 - 3.7e-11 43.4 30.0 2.9e-06 27.5 9.6 2.9 3 0 0 3 3 3 2 EamA-like transporter family G2F PF07474.12 RKO86459.1 - 0.21 11.4 0.6 1.2 8.9 0.0 2.0 2 0 0 2 2 2 0 G2F domain DUF4853 PF16145.5 RKO86460.1 - 0.063 13.4 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4853) Ribonuclease_T2 PF00445.18 RKO86462.1 - 1.4e-20 74.3 5.0 1.8e-20 73.9 5.0 1.2 1 0 0 1 1 1 1 Ribonuclease T2 family Ribosomal_L24e PF01246.20 RKO86463.1 - 1.5e-24 86.0 0.3 1.5e-24 86.0 0.3 2.3 2 0 0 2 2 2 1 Ribosomal protein L24e Asp-B-Hydro_N PF05279.11 RKO86463.1 - 0.44 10.6 7.7 0.52 10.3 7.7 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region SLD5_C PF16922.5 RKO86464.1 - 2.3e-16 59.7 0.0 3.9e-16 59.0 0.0 1.4 1 0 0 1 1 1 1 DNA replication complex GINS protein SLD5 C-terminus Sld5 PF05916.11 RKO86464.1 - 2.3e-07 31.3 0.7 4.5e-07 30.3 0.7 1.5 1 0 0 1 1 1 1 GINS complex protein LON_substr_bdg PF02190.16 RKO86465.1 - 1.2e-15 57.9 0.1 1.5e-15 57.6 0.1 1.1 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain Atrophin-1 PF03154.15 RKO86466.1 - 1.2 7.3 10.1 1.2 7.3 10.1 1.1 1 0 0 1 1 1 0 Atrophin-1 family PRR18 PF15671.5 RKO86466.1 - 5.6 6.8 14.0 11 5.8 14.0 1.4 1 0 0 1 1 1 0 Proline-rich protein family 18 FNIP_N PF14636.6 RKO86467.1 - 5.1e-13 50.3 4.2 1.8e-11 45.3 0.0 3.6 3 2 0 3 3 3 1 Folliculin-interacting protein N-terminus Spt20 PF12090.8 RKO86467.1 - 0.33 10.5 9.6 0.49 10.0 9.6 1.1 1 0 0 1 1 1 0 Spt20 family PPR_2 PF13041.6 RKO86468.1 - 5.4e-41 138.5 0.0 2.7e-11 43.5 0.0 7.7 3 1 3 7 7 7 7 PPR repeat family PPR_3 PF13812.6 RKO86468.1 - 8.7e-35 118.6 0.0 9.5e-12 44.8 0.0 7.1 6 1 1 7 7 7 6 Pentatricopeptide repeat domain PPR PF01535.20 RKO86468.1 - 1.8e-28 96.8 0.0 0.0018 18.4 0.0 9.5 9 0 0 9 9 9 7 PPR repeat PPR_long PF17177.4 RKO86468.1 - 2e-23 82.9 0.2 3.9e-11 42.7 0.0 4.2 2 1 3 5 5 5 4 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 RKO86468.1 - 4.3e-22 77.5 0.0 1.4e-05 24.7 0.0 8.4 8 1 0 8 8 8 5 PPR repeat TPR_14 PF13428.6 RKO86468.1 - 4.6e-05 23.9 26.1 0.24 12.3 0.2 7.8 6 1 2 8 8 8 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO86468.1 - 0.0013 19.1 2.1 29 5.2 0.1 4.6 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF3368 PF11848.8 RKO86468.1 - 0.045 13.5 3.6 1.5 8.7 0.0 5.0 8 0 0 8 8 8 0 Domain of unknown function (DUF3368) TPR_4 PF07721.14 RKO86468.1 - 0.58 11.0 29.9 4.4 8.2 0.6 6.1 5 0 0 5 5 5 0 Tetratricopeptide repeat B12-binding_2 PF02607.17 RKO86468.1 - 2.5 8.6 7.7 54 4.3 0.2 4.7 3 2 2 5 5 5 0 B12 binding domain Beta_elim_lyase PF01212.21 RKO86469.1 - 3.2e-23 82.4 0.0 3.5e-23 82.3 0.0 1.0 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 RKO86469.1 - 0.024 13.9 0.0 0.027 13.8 0.0 1.0 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Abhydrolase_6 PF12697.7 RKO86472.1 - 8e-05 23.3 1.0 0.00011 22.8 0.1 1.7 1 1 1 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 RKO86472.1 - 0.045 13.0 0.1 0.095 12.0 0.0 1.6 2 0 0 2 2 2 0 Serine aminopeptidase, S33 PGAP1 PF07819.13 RKO86472.1 - 0.22 11.2 2.1 0.4 10.4 2.1 1.5 1 1 0 1 1 1 0 PGAP1-like protein Peptidase_S9_N PF02897.15 RKO86473.1 - 3.5e-07 29.4 0.2 0.00013 20.9 0.2 2.0 2 0 0 2 2 2 2 Prolyl oligopeptidase, N-terminal beta-propeller domain Barttin PF15462.6 RKO86474.1 - 0.92 9.2 6.4 0.33 10.7 3.4 1.6 1 1 1 2 2 2 0 Bartter syndrome, infantile, with sensorineural deafness (Barttin) DUF563 PF04577.14 RKO86475.1 - 0.15 12.1 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF563) Cornichon PF03311.14 RKO86476.1 - 1.4e-52 177.1 12.0 1.6e-52 176.9 12.0 1.0 1 0 0 1 1 1 1 Cornichon protein CesT PF05932.13 RKO86477.1 - 0.00092 19.3 0.0 0.0013 18.9 0.0 1.2 1 0 0 1 1 1 1 Tir chaperone protein (CesT) family SMG1 PF15785.5 RKO86478.1 - 2.1e-38 132.1 0.3 1.6e-36 126.0 0.0 2.1 2 0 0 2 2 2 2 Serine/threonine-protein kinase smg-1 Glyco_transf_28 PF03033.20 RKO86480.1 - 2.1e-24 86.1 0.0 3.4e-24 85.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 N-terminal domain UDPGT PF00201.18 RKO86480.1 - 6.6e-05 21.9 0.2 8.9e-05 21.5 0.2 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Pkinase PF00069.25 RKO86481.1 - 9e-16 58.0 0.7 1.1e-14 54.5 0.7 2.0 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO86481.1 - 2.1e-07 30.5 0.9 5.1e-06 26.0 0.9 2.1 1 1 0 1 1 1 1 Protein tyrosine kinase Kelch_3 PF13415.6 RKO86482.1 - 5.8e-20 71.1 13.1 9.1e-07 29.0 0.5 4.8 4 0 0 4 4 4 4 Galactose oxidase, central domain Kelch_4 PF13418.6 RKO86482.1 - 6e-19 67.8 19.1 1.2e-07 31.6 0.5 6.2 6 1 0 6 6 6 4 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO86482.1 - 1.2e-17 63.2 6.0 1.1e-10 40.9 0.2 4.2 4 0 0 4 4 4 3 Kelch motif Kelch_6 PF13964.6 RKO86482.1 - 2.3e-17 62.6 16.2 3.5e-09 36.6 0.3 6.0 5 1 2 7 7 7 4 Kelch motif Kelch_5 PF13854.6 RKO86482.1 - 3.7e-16 58.7 4.4 1.2e-05 25.2 0.1 4.9 4 0 0 4 4 4 3 Kelch motif Kelch_2 PF07646.15 RKO86482.1 - 5.9e-14 51.4 6.7 3.8e-09 36.1 0.2 5.1 5 0 0 5 5 5 2 Kelch motif MRP-S34 PF16053.5 RKO86483.1 - 0.00011 21.9 0.0 0.00017 21.2 0.0 1.3 2 0 0 2 2 2 1 Mitochondrial 28S ribosomal protein S34 L31 PF09784.9 RKO86484.1 - 1.1e-15 57.9 1.1 1.5e-15 57.5 1.1 1.1 1 0 0 1 1 1 1 Mitochondrial ribosomal protein L31 KSHV_K8 PF07188.11 RKO86485.1 - 0.0045 16.4 0.5 0.0045 16.4 0.5 1.7 2 0 0 2 2 2 1 Kaposi's sarcoma-associated herpesvirus (KSHV) K8 protein U3_snoRNA_assoc PF08297.11 RKO86485.1 - 0.0045 17.7 0.9 0.0045 17.7 0.9 3.2 2 1 0 2 2 2 1 U3 snoRNA associated SDA1 PF05285.12 RKO86485.1 - 0.58 9.5 31.5 0.95 8.8 31.5 1.3 1 0 0 1 1 1 0 SDA1 Med5 PF08689.10 RKO86485.1 - 7 4.3 7.2 9.3 3.9 7.2 1.0 1 0 0 1 1 1 0 Mediator complex subunit Med5 ALMT PF11744.8 RKO86485.1 - 8 5.2 8.9 8.1 5.1 8.0 1.3 1 1 0 1 1 1 0 Aluminium activated malate transporter Asp PF00026.23 RKO86487.1 - 6.2e-39 134.3 0.0 7.8e-39 133.9 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Asp_protease_2 PF13650.6 RKO86487.1 - 0.0026 18.4 0.9 0.68 10.6 0.1 3.0 2 1 0 2 2 2 2 Aspartyl protease TAXi_C PF14541.6 RKO86487.1 - 0.0036 17.1 0.0 0.017 14.9 0.0 1.9 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal gag-asp_proteas PF13975.6 RKO86487.1 - 0.095 13.3 0.7 23 5.6 0.2 2.5 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease TAXi_N PF14543.6 RKO86487.1 - 0.16 12.2 0.2 7.2 6.8 0.2 2.4 1 1 0 1 1 1 0 Xylanase inhibitor N-terminal DUF3759 PF12585.8 RKO86488.1 - 3.7e-36 123.0 11.4 4.5e-36 122.8 11.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3759) RNase_HII PF01351.18 RKO86489.1 - 1.2e-22 80.8 0.0 2.2e-22 79.9 0.0 1.4 1 1 0 1 1 1 1 Ribonuclease HII MscL PF01741.18 RKO86490.1 - 1.2e-20 74.0 0.2 1.4e-20 73.8 0.2 1.0 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL MAPEG PF01124.18 RKO86490.1 - 0.066 13.1 0.1 0.11 12.4 0.1 1.5 1 1 0 1 1 1 0 MAPEG family Endonuc_Holl PF10107.9 RKO86491.1 - 0.0036 17.2 3.7 1.8 8.4 0.0 3.1 3 1 0 3 3 3 2 Endonuclease related to archaeal Holliday junction resolvase DUF3835 PF12927.7 RKO86491.1 - 1.7 9.5 6.1 7.1 7.6 0.0 3.8 4 0 0 4 4 4 0 Domain of unknown function (DUF3835) FliL PF03748.14 RKO86491.1 - 4.1 8.1 11.8 2.5 8.7 3.2 3.5 3 2 0 3 3 3 0 Flagellar basal body-associated protein FliL Ntox27 PF15531.6 RKO86492.1 - 0.33 10.9 2.5 8.8 6.2 0.8 2.9 1 1 1 2 2 2 0 Bacterial toxin 27 DASH_Dam1 PF08653.10 RKO86492.1 - 2.3 8.1 4.0 5.5 6.9 0.0 3.5 4 0 0 4 4 4 0 DASH complex subunit Dam1 HTH_6 PF01418.17 RKO86492.1 - 5.6 7.0 7.3 29 4.8 0.1 4.3 2 1 2 4 4 4 0 Helix-turn-helix domain, rpiR family E2R135 PF11570.8 RKO86492.1 - 7.1 6.9 23.1 1.1 9.5 0.5 6.1 3 1 3 6 6 6 0 Coiled-coil receptor-binding R-domain of colicin E2 Mito_carr PF00153.27 RKO86493.1 - 2.9e-41 139.3 1.1 3e-22 78.3 0.1 2.1 2 0 0 2 2 2 2 Mitochondrial carrier protein DUF3764 PF12594.8 RKO86493.1 - 0.13 12.3 0.0 2.3 8.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3764) Glyco_hydro_47 PF01532.20 RKO86494.1 - 1.9e-41 142.5 0.0 2.2e-41 142.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 47 DUF3626 PF12294.8 RKO86496.1 - 0.029 13.4 0.0 0.036 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3626) PPR_2 PF13041.6 RKO86498.1 - 1.6e-14 53.8 0.0 0.00097 19.3 0.0 5.9 6 0 0 6 6 6 3 PPR repeat family PPR PF01535.20 RKO86498.1 - 2.6e-13 49.2 6.5 0.064 13.5 0.1 6.6 7 0 0 7 7 7 4 PPR repeat PPR_3 PF13812.6 RKO86498.1 - 1.9e-08 34.2 0.0 0.0029 17.6 0.0 4.4 3 1 1 4 4 4 2 Pentatricopeptide repeat domain PPR_1 PF12854.7 RKO86498.1 - 0.00011 21.8 2.5 1.6 8.5 0.1 5.1 6 0 0 6 6 6 1 PPR repeat TPR_19 PF14559.6 RKO86498.1 - 0.0092 16.5 4.1 1.4 9.4 1.0 4.1 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO86498.1 - 0.0097 16.7 22.2 3.1 8.9 0.1 7.4 7 2 2 9 9 9 2 Tetratricopeptide repeat PPR_long PF17177.4 RKO86498.1 - 0.065 12.6 4.9 10 5.4 1.3 3.5 2 1 1 3 3 3 0 Pentacotripeptide-repeat region of PRORP Bim_N PF06773.11 RKO86499.1 - 0.15 11.8 2.9 0.36 10.6 2.9 1.6 1 0 0 1 1 1 0 Bim protein N-terminus Pkinase PF00069.25 RKO86500.1 - 1.6e-25 90.0 0.0 2.7e-19 69.6 0.0 2.1 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 RKO86500.1 - 1.3e-12 47.6 0.0 1.7e-10 40.6 0.0 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO86500.1 - 3.9e-05 22.6 0.0 5.1e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 RKO86500.1 - 0.00032 20.1 0.0 0.0038 16.6 0.0 2.0 2 0 0 2 2 2 1 Kinase-like APH PF01636.23 RKO86500.1 - 0.014 15.3 0.1 0.02 14.8 0.1 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family GRAM PF02893.20 RKO86502.1 - 9.1e-37 125.4 3.9 1.5e-24 86.1 0.3 2.3 2 0 0 2 2 2 2 GRAM domain Fip1 PF05182.13 RKO86503.1 - 2.1e-25 88.0 1.0 4.3e-25 87.0 1.0 1.6 1 0 0 1 1 1 1 Fip1 motif Aldose_epim PF01263.20 RKO86504.1 - 7.1e-06 25.5 0.0 3.5e-05 23.3 0.0 1.8 1 1 0 1 1 1 1 Aldose 1-epimerase Ank_5 PF13857.6 RKO86507.1 - 0.081 13.3 0.6 2.7 8.4 0.0 3.4 3 1 1 4 4 4 0 Ankyrin repeats (many copies) Vps36_ESCRT-II PF11605.8 RKO86508.1 - 1.3e-08 34.9 0.0 1.8e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Vacuolar protein sorting protein 36 Vps36 zf-RanBP PF00641.18 RKO86508.1 - 6e-06 25.5 1.1 1e-05 24.7 1.1 1.3 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others Arrestin_N PF00339.29 RKO86509.1 - 9.4e-08 32.2 0.0 1.6e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Arrestin_C PF02752.22 RKO86509.1 - 0.0025 18.3 0.0 0.028 14.9 0.0 2.0 2 0 0 2 2 2 1 Arrestin (or S-antigen), C-terminal domain DUF3678 PF12435.8 RKO86509.1 - 0.2 11.1 1.8 3.5 7.1 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3678) PBD PF00786.28 RKO86510.1 - 2.4e-07 31.0 0.0 3.3e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 P21-Rho-binding domain DUF5593 PF18007.1 RKO86512.1 - 5.7 7.7 8.0 1.7 9.4 3.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5593) RIFIN PF02009.16 RKO86512.1 - 9.3 6.0 9.9 11 5.8 9.9 1.1 1 0 0 1 1 1 0 Rifin WD40 PF00400.32 RKO86514.1 - 0.00042 21.1 3.0 8.4 7.4 0.0 4.2 4 0 0 4 4 4 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO86514.1 - 0.1 12.9 0.0 0.59 10.5 0.0 2.2 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain DnaJ PF00226.31 RKO86519.1 - 0.0031 17.6 0.0 0.0072 16.4 0.0 1.7 1 0 0 1 1 1 1 DnaJ domain YjbR PF04237.13 RKO86519.1 - 0.037 14.6 0.0 0.079 13.5 0.0 1.5 1 0 0 1 1 1 0 YjbR DUF1547 PF07577.11 RKO86520.1 - 0.073 13.5 0.0 12 6.4 0.0 2.6 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1547) Hamartin PF04388.12 RKO86520.1 - 0.39 9.3 8.5 0.44 9.2 8.5 1.2 1 0 0 1 1 1 0 Hamartin protein RRM_1 PF00076.22 RKO86521.1 - 3.8e-22 77.9 0.0 4.3e-22 77.7 0.0 1.0 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DbpA PF03880.15 RKO86521.1 - 4e-05 23.5 0.0 6.9e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 DbpA RNA binding domain RRM_5 PF13893.6 RKO86521.1 - 0.0062 16.1 0.0 0.0065 16.1 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nckap1 PF09735.9 RKO86522.1 - 3.4e-21 75.0 0.0 2.2e-19 69.0 0.0 2.0 2 0 0 2 2 2 2 Membrane-associated apoptosis protein Coatomer_WDAD PF04053.14 RKO86523.1 - 2.5e-10 40.0 1.0 2.6e-06 26.8 0.1 2.4 2 0 0 2 2 2 2 Coatomer WD associated region TPR_7 PF13176.6 RKO86523.1 - 0.001 18.9 1.6 0.032 14.3 0.2 3.8 3 1 1 4 4 4 1 Tetratricopeptide repeat SbmA_BacA PF05992.12 RKO86523.1 - 0.088 12.2 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 SbmA/BacA-like family TPR_1 PF00515.28 RKO86523.1 - 0.22 11.4 6.5 0.57 10.1 0.2 4.2 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_2 PF07719.17 RKO86523.1 - 0.3 11.3 11.8 0.35 11.1 0.1 5.2 5 1 1 6 6 6 0 Tetratricopeptide repeat RasGEF PF00617.19 RKO86524.1 - 1.3e-27 97.2 0.0 1e-15 58.4 0.0 2.5 1 1 1 2 2 2 2 RasGEF domain RasGEF_N PF00618.20 RKO86524.1 - 0.0062 16.8 0.0 0.035 14.3 0.0 2.1 2 0 0 2 2 2 1 RasGEF N-terminal motif DUF5351 PF17302.2 RKO86524.1 - 2 8.7 8.6 4.1 7.7 0.1 3.0 3 0 0 3 3 3 0 Family of unknown function (DUF5351) Vps62 PF06101.11 RKO86525.1 - 4.5e-05 22.0 0.3 6.4e-05 21.5 0.3 1.1 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 62 PQQ_3 PF13570.6 RKO86528.1 - 0.0014 19.1 4.8 0.44 11.1 0.2 3.9 3 0 0 3 3 3 2 PQQ-like domain SGL PF08450.12 RKO86528.1 - 0.013 15.1 0.9 0.14 11.7 0.5 2.4 1 1 1 2 2 2 0 SMP-30/Gluconolactonase/LRE-like region Pkinase PF00069.25 RKO86529.1 - 2.1e-07 30.6 0.0 2.7e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO86529.1 - 6.4e-06 25.6 0.0 9.1e-06 25.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase RRM_1 PF00076.22 RKO86530.1 - 1.9e-22 78.8 0.0 6.8e-15 54.6 0.0 2.1 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 RKO86530.1 - 0.0029 17.7 0.0 0.45 10.7 0.0 2.5 2 1 0 2 2 2 2 RNA recognition motif Cas_Cas2CT1978 PF09707.10 RKO86530.1 - 0.02 14.9 0.0 0.036 14.1 0.0 1.4 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas2CT1978) ECH_2 PF16113.5 RKO86532.1 - 2.5e-123 411.8 0.0 3e-123 411.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_1 PF00378.20 RKO86532.1 - 2e-31 109.2 0.1 8.6e-30 103.9 0.0 2.2 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase RibD_C PF01872.17 RKO86533.1 - 8.3e-36 123.7 0.0 9.2e-36 123.5 0.0 1.0 1 0 0 1 1 1 1 RibD C-terminal domain Pkinase_Tyr PF07714.17 RKO86534.1 - 2.2e-06 27.2 0.0 3.1e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase 2-Hacid_dh_C PF02826.19 RKO86540.1 - 6.1e-58 195.1 0.0 8.2e-58 194.7 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 RKO86540.1 - 1.1e-27 96.3 0.0 1.3e-27 96.1 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F420_oxidored PF03807.17 RKO86540.1 - 0.00036 21.1 0.0 0.0012 19.4 0.0 1.9 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.21 RKO86540.1 - 0.005 16.9 0.0 0.0084 16.2 0.0 1.3 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_2 PF03446.15 RKO86540.1 - 0.0051 17.0 0.0 0.009 16.2 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 RKO86540.1 - 0.068 12.7 0.0 0.15 11.7 0.0 1.5 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Lipase_3 PF01764.25 RKO86543.1 - 4.9e-29 101.0 0.0 6.4e-29 100.6 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO86543.1 - 0.00052 19.6 0.7 0.0035 16.9 0.6 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 RKO86543.1 - 0.0024 17.2 0.0 0.0032 16.8 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_8 PF06259.12 RKO86543.1 - 0.026 14.1 0.1 0.039 13.6 0.1 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase Abhydrolase_6 PF12697.7 RKO86543.1 - 0.033 14.8 0.2 0.035 14.7 0.2 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family DUF676 PF05057.14 RKO86543.1 - 0.083 12.4 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Putative serine esterase (DUF676) AAA PF00004.29 RKO86544.1 - 1.8e-57 193.4 0.0 6.8e-47 159.2 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 RKO86544.1 - 2.3e-23 81.7 8.9 1.9e-12 46.8 0.2 3.6 2 2 0 2 2 2 2 AAA+ lid domain Vps4_C PF09336.10 RKO86544.1 - 2.8e-07 30.4 0.1 2e-05 24.5 0.0 2.7 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain RuvB_N PF05496.12 RKO86544.1 - 1.3e-06 28.3 0.0 1e-05 25.3 0.0 2.6 3 1 1 4 4 3 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 RKO86544.1 - 8.3e-06 26.3 0.2 0.00028 21.3 0.0 2.9 2 1 0 2 2 2 1 AAA ATPase domain AAA_2 PF07724.14 RKO86544.1 - 0.00025 21.2 0.0 0.012 15.7 0.0 2.7 2 1 0 2 2 2 1 AAA domain (Cdc48 subfamily) ABC_tran PF00005.27 RKO86544.1 - 0.00036 21.1 0.0 0.0029 18.1 0.0 2.3 2 0 0 2 2 2 1 ABC transporter Viral_helicase1 PF01443.18 RKO86544.1 - 0.00053 19.8 0.0 0.0016 18.2 0.0 1.8 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_5 PF07728.14 RKO86544.1 - 0.00061 19.8 0.1 0.02 14.9 0.0 3.3 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 RKO86544.1 - 0.001 19.4 0.0 0.0025 18.2 0.0 1.7 1 0 0 1 1 1 1 RNA helicase AAA_33 PF13671.6 RKO86544.1 - 0.0014 18.8 0.0 0.006 16.8 0.0 2.2 2 1 0 2 2 1 1 AAA domain DUF815 PF05673.13 RKO86544.1 - 0.0028 16.8 0.0 0.0063 15.7 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_18 PF13238.6 RKO86544.1 - 0.0032 18.0 0.0 0.0091 16.6 0.0 1.9 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 RKO86544.1 - 0.0033 16.8 0.0 0.0087 15.5 0.0 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 RKO86544.1 - 0.0051 17.1 0.0 0.028 14.7 0.0 2.3 1 1 1 2 2 2 1 AAA domain TIP49 PF06068.13 RKO86544.1 - 0.0054 16.0 0.0 0.016 14.4 0.0 1.8 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_7 PF12775.7 RKO86544.1 - 0.0059 16.1 0.0 0.033 13.7 0.0 2.1 2 0 0 2 2 2 1 P-loop containing dynein motor region NB-ARC PF00931.22 RKO86544.1 - 0.0064 15.7 0.0 0.092 11.9 0.0 2.4 2 0 0 2 2 2 1 NB-ARC domain Parvo_NS1 PF01057.17 RKO86544.1 - 0.0097 15.0 0.0 0.018 14.2 0.0 1.3 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 IstB_IS21 PF01695.17 RKO86544.1 - 0.015 15.0 0.0 0.033 13.9 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein SRPRB PF09439.10 RKO86544.1 - 0.019 14.4 0.3 4.6 6.6 0.3 2.7 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit AAA_14 PF13173.6 RKO86544.1 - 0.019 15.0 0.0 0.042 13.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 RKO86544.1 - 0.02 15.3 1.0 0.51 10.8 0.0 3.3 3 1 2 5 5 5 0 AAA domain AAA_28 PF13521.6 RKO86544.1 - 0.024 14.9 0.1 0.086 13.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 RKO86544.1 - 0.044 13.7 0.0 0.13 12.1 0.0 1.8 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Zeta_toxin PF06414.12 RKO86544.1 - 0.053 12.8 0.1 0.27 10.5 0.0 2.2 3 0 0 3 3 3 0 Zeta toxin NACHT PF05729.12 RKO86544.1 - 0.054 13.4 0.0 0.17 11.8 0.0 1.8 1 1 0 1 1 1 0 NACHT domain TsaE PF02367.17 RKO86544.1 - 0.064 13.3 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Bac_DnaA PF00308.18 RKO86544.1 - 0.066 13.0 0.0 0.51 10.1 0.0 2.3 3 0 0 3 3 2 0 Bacterial dnaA protein NTPase_1 PF03266.15 RKO86544.1 - 0.11 12.3 0.1 2.6 7.9 0.0 2.5 2 0 0 2 2 2 0 NTPase Rad17 PF03215.15 RKO86544.1 - 0.13 12.2 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain DUF4894 PF16235.5 RKO86544.1 - 0.19 12.1 0.0 1.4 9.3 0.0 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4894) AAA_11 PF13086.6 RKO86544.1 - 0.21 11.3 1.1 1.1 8.9 1.1 2.0 1 1 0 1 1 1 0 AAA domain GCR1_C PF12550.8 RKO86545.1 - 2.9e-19 69.2 0.2 3.1e-19 69.1 0.2 1.0 1 0 0 1 1 1 1 Transcriptional activator of glycolytic enzymes Ribonuclease_3 PF00636.26 RKO86546.1 - 1.1e-41 141.7 0.0 1.4e-20 73.8 0.0 2.7 2 0 0 2 2 2 2 Ribonuclease III domain Ribonucleas_3_3 PF14622.6 RKO86546.1 - 5.4e-18 65.4 0.0 1.2e-07 32.0 0.0 3.4 3 0 0 3 3 3 3 Ribonuclease-III-like Dicer_dimer PF03368.14 RKO86546.1 - 1.2e-16 60.6 0.0 3.4e-16 59.2 0.0 1.8 1 0 0 1 1 1 1 Dicer dimerisation domain PAZ PF02170.22 RKO86546.1 - 0.059 13.2 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 PAZ domain DUF2510 PF10708.9 RKO86546.1 - 0.11 12.3 0.4 0.26 11.1 0.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2510) SSXT PF05030.12 RKO86548.1 - 0.079 12.6 0.0 0.15 11.7 0.0 1.5 1 1 0 1 1 1 0 SSXT protein (N-terminal region) Cyto_heme_lyase PF01265.17 RKO86549.1 - 1.4e-39 136.5 4.9 2e-38 132.6 4.9 1.9 1 1 0 1 1 1 1 Cytochrome c/c1 heme lyase Ribosomal_S8 PF00410.19 RKO86550.1 - 3.2e-22 78.8 0.0 4.4e-22 78.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S8 FCH PF00611.23 RKO86552.1 - 2e-13 50.4 0.5 3e-13 49.8 0.5 1.3 1 0 0 1 1 1 1 Fes/CIP4, and EFC/F-BAR homology domain ThrE PF06738.12 RKO86555.1 - 9.3e-32 110.3 2.4 5.4e-26 91.4 5.4 2.1 2 0 0 2 2 2 2 Putative threonine/serine exporter BCA_ABC_TP_C PF12399.8 RKO86559.1 - 1.1 9.2 8.4 0.25 11.3 3.0 2.8 2 0 0 2 2 2 0 Branched-chain amino acid ATP-binding cassette transporter Velvet PF11754.8 RKO86560.1 - 7.9e-33 114.4 0.0 8.8e-33 114.3 0.0 1.0 1 0 0 1 1 1 1 Velvet factor PBP1_TM PF14812.6 RKO86561.1 - 0.13 12.6 3.9 3.2 8.2 4.6 2.7 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Spt5_N PF11942.8 RKO86561.1 - 0.2 12.7 11.0 1.1 10.2 6.1 2.7 2 0 0 2 2 2 0 Spt5 transcription elongation factor, acidic N-terminal PGA2 PF07543.12 RKO86561.1 - 1.4 8.9 6.3 1 9.4 3.3 2.2 2 0 0 2 2 2 0 Protein trafficking PGA2 La PF05383.17 RKO86562.1 - 1.1e-20 73.5 0.0 1.5e-19 69.8 0.0 2.3 2 0 0 2 2 2 1 La domain Alba PF01918.21 RKO86564.1 - 2.8e-14 52.7 0.2 4.5e-14 52.0 0.2 1.3 1 0 0 1 1 1 1 Alba MOSC_N PF03476.16 RKO86565.1 - 2.2e-17 63.0 0.0 3.3e-17 62.5 0.0 1.3 1 0 0 1 1 1 1 MOSC N-terminal beta barrel domain Ribosomal_S7e PF01251.18 RKO86566.1 - 5.5e-84 280.5 4.2 6.2e-84 280.3 4.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S7e DUF1382 PF07131.11 RKO86566.1 - 0.088 12.8 0.1 0.19 11.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1382) DUF5572 PF17733.1 RKO86568.1 - 1.2e-21 76.2 0.0 2.5e-21 75.2 0.0 1.5 1 0 0 1 1 1 1 Family of unknown function (DUF5572) ORF45 PF17620.2 RKO86568.1 - 0.25 11.4 0.1 0.3 11.2 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function DUF572 PF04502.13 RKO86572.1 - 1.2e-47 163.1 8.6 1.4e-47 163.0 8.6 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) Ank_5 PF13857.6 RKO86573.1 - 1.3e-06 28.6 0.0 0.0024 18.1 0.0 2.7 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO86573.1 - 4.7e-06 27.1 0.2 0.14 12.8 0.1 3.2 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO86573.1 - 1.9e-05 25.1 0.0 0.0015 19.1 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO86573.1 - 0.0014 19.0 0.0 3.4 8.5 0.0 3.3 3 0 0 3 3 3 2 Ankyrin repeat Protamine_3 PF08188.11 RKO86573.1 - 0.28 11.4 2.5 0.64 10.3 2.5 1.6 1 0 0 1 1 1 0 Spermatozal protamine family Ubie_methyltran PF01209.18 RKO86575.1 - 2.5e-79 265.9 0.0 4.2e-79 265.1 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.6 RKO86575.1 - 1.3e-16 61.1 0.0 2.2e-16 60.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO86575.1 - 3.7e-16 59.3 0.0 4.9e-16 58.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 RKO86575.1 - 2.7e-15 56.8 0.0 4.7e-15 56.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 RKO86575.1 - 2.3e-12 47.5 0.0 3.7e-12 46.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 RKO86575.1 - 3.2e-07 30.3 0.0 4.8e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_5 PF01795.19 RKO86575.1 - 0.0043 16.6 0.0 0.037 13.5 0.0 2.0 1 1 1 2 2 2 1 MraW methylase family ADH_zinc_N PF00107.26 RKO86575.1 - 0.011 15.7 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 Zinc-binding dehydrogenase Methyltransf_8 PF05148.15 RKO86575.1 - 0.026 14.4 0.0 0.052 13.4 0.0 1.4 1 0 0 1 1 1 0 Hypothetical methyltransferase Methyltransf_32 PF13679.6 RKO86575.1 - 0.14 12.2 0.0 0.21 11.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain SOG2 PF10428.9 RKO86578.1 - 0.25 10.5 7.5 0.25 10.5 7.5 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein Polysacc_deac_1 PF01522.21 RKO86583.1 - 1.4e-12 47.6 0.0 1.6e-12 47.4 0.0 1.0 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 RKO86583.1 - 0.0078 15.5 0.0 0.0085 15.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 DUF2031 PF09592.10 RKO86585.1 - 0.067 12.7 2.7 0.073 12.6 0.5 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2031) tRNA_lig_kinase PF08303.11 RKO86585.1 - 1.1 9.4 4.4 0.76 9.8 1.4 1.8 1 1 1 2 2 2 0 tRNA ligase kinase domain Pantoate_ligase PF02569.15 RKO86585.1 - 1.1 8.4 8.0 0.18 11.0 4.0 1.6 1 1 1 2 2 2 0 Pantoate-beta-alanine ligase DUF2870 PF11069.8 RKO86585.1 - 1.5 9.3 7.9 0.74 10.2 0.4 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF2870) FUSC PF04632.12 RKO86585.1 - 2.2 6.7 15.9 4.2 5.8 14.6 1.7 1 1 1 2 2 2 0 Fusaric acid resistance protein family DUF4407 PF14362.6 RKO86585.1 - 3.1 7.1 16.3 3.6 6.9 16.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ACR_tran PF00873.19 RKO86585.1 - 3.3 5.3 4.7 3.6 5.1 4.7 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family Dynamin_N PF00350.23 RKO86585.1 - 4.1 7.4 7.6 36 4.4 7.6 2.1 1 1 0 1 1 1 0 Dynamin family Chitin_synth_2 PF03142.15 RKO86586.1 - 1.7e-21 76.4 0.0 2.4e-21 75.9 0.0 1.1 1 0 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 RKO86586.1 - 3.6e-17 62.9 0.1 5.3e-17 62.4 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 RKO86586.1 - 2.5e-11 43.9 0.0 4.5e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 RKO86586.1 - 2.8e-07 30.2 0.0 0.00015 21.3 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 21 Glycos_transf_2 PF00535.26 RKO86586.1 - 1.4e-06 28.3 0.1 1.5e-05 24.8 0.0 2.3 2 0 0 2 2 2 1 Glycosyl transferase family 2 Adaptin_N PF01602.20 RKO86587.1 - 7.1e-55 186.5 3.2 8.5e-55 186.3 3.2 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 RKO86587.1 - 6.5e-05 23.0 1.6 0.00013 22.1 0.2 2.1 2 1 1 3 3 3 1 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 RKO86587.1 - 0.00078 19.8 0.3 3.5 8.1 0.1 3.2 2 1 1 3 3 3 2 HEAT repeats Arm PF00514.23 RKO86587.1 - 0.011 15.7 0.0 0.54 10.4 0.0 2.9 2 0 0 2 2 2 0 Armadillo/beta-catenin-like repeat Vac14_Fab1_bd PF12755.7 RKO86587.1 - 0.019 15.6 3.6 0.75 10.4 0.1 3.2 2 1 2 4 4 4 0 Vacuolar 14 Fab1-binding region HEAT PF02985.22 RKO86587.1 - 0.047 14.0 0.4 8.1 7.0 0.0 3.9 4 0 0 4 4 4 0 HEAT repeat HEAT_PBS PF03130.16 RKO86587.1 - 0.15 12.8 0.0 24 6.0 0.1 2.8 2 0 0 2 2 2 0 PBS lyase HEAT-like repeat MORN PF02493.20 RKO86588.1 - 8e-14 50.6 6.0 1.6e-05 24.5 1.7 3.7 3 0 0 3 3 3 3 MORN repeat FAD_binding_3 PF01494.19 RKO86589.1 - 1.9e-10 40.5 0.0 2.3e-10 40.3 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 RKO86589.1 - 0.00087 19.5 1.2 0.0012 19.0 0.0 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain 3HCDH_N PF02737.18 RKO86589.1 - 0.015 15.2 0.1 0.021 14.7 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GIDA PF01134.22 RKO86589.1 - 0.015 14.4 0.0 0.02 14.0 0.0 1.3 1 1 0 1 1 1 0 Glucose inhibited division protein A DAO PF01266.24 RKO86589.1 - 0.027 14.1 0.1 0.073 12.6 0.0 1.5 1 1 0 2 2 2 0 FAD dependent oxidoreductase Pyr_redox PF00070.27 RKO86589.1 - 0.084 13.4 0.0 0.16 12.6 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 RKO86589.1 - 0.15 11.2 0.0 0.26 10.5 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Peptidase_M1 PF01433.20 RKO86591.1 - 5.2e-74 248.5 0.1 7e-74 248.1 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 RKO86591.1 - 1.6e-40 139.3 0.0 2.2e-40 138.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain PLA2_B PF01735.18 RKO86594.1 - 4e-27 94.8 0.0 1.1e-15 57.1 0.0 2.2 2 0 0 2 2 2 2 Lysophospholipase catalytic domain TRIC PF05197.13 RKO86595.1 - 0.013 15.1 0.1 0.02 14.5 0.1 1.2 1 0 0 1 1 1 0 TRIC channel Fungal_trans PF04082.18 RKO86596.1 - 0.039 13.0 0.0 0.053 12.5 0.0 1.2 1 0 0 1 1 1 0 Fungal specific transcription factor domain PPR_2 PF13041.6 RKO86597.1 - 2.4e-09 37.3 0.0 2.2e-05 24.6 0.0 3.8 3 1 0 3 3 3 2 PPR repeat family PPR_3 PF13812.6 RKO86597.1 - 3.1e-06 27.2 0.1 0.033 14.3 0.0 3.7 4 0 0 4 4 4 2 Pentatricopeptide repeat domain PPR PF01535.20 RKO86597.1 - 0.0024 18.0 0.0 11 6.5 0.0 4.1 4 0 0 4 4 4 2 PPR repeat Pkinase PF00069.25 RKO86598.1 - 1.1e-64 218.4 0.0 1.2e-64 218.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO86598.1 - 1.6e-34 119.4 0.0 2e-34 119.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO86598.1 - 0.0024 17.8 0.0 0.012 15.5 0.0 1.9 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 RKO86598.1 - 0.0028 16.5 0.0 0.0045 15.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 RKO86598.1 - 0.01 15.2 0.0 0.021 14.2 0.0 1.5 1 1 1 2 2 2 0 Kinase-like Haspin_kinase PF12330.8 RKO86598.1 - 0.022 13.7 0.0 0.032 13.2 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain Seadorna_VP7 PF07387.11 RKO86598.1 - 0.08 12.0 0.0 0.12 11.4 0.0 1.3 1 0 0 1 1 1 0 Seadornavirus VP7 Kdo PF06293.14 RKO86598.1 - 0.15 11.4 0.0 0.37 10.1 0.0 1.6 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family ARS2 PF04959.13 RKO86599.1 - 0.092 13.1 1.9 0.13 12.7 1.9 1.2 1 0 0 1 1 1 0 Arsenite-resistance protein 2 RNA_lig_T4_1 PF09511.10 RKO86600.1 - 8.1e-05 22.6 0.0 0.00011 22.1 0.0 1.2 1 0 0 1 1 1 1 RNA ligase DUF4570 PF15134.6 RKO86600.1 - 0.12 12.4 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4570) ATP-synt_ab PF00006.25 RKO86601.1 - 1.1e-49 169.0 0.0 1.5e-49 168.5 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 RKO86601.1 - 1.2e-12 48.1 0.5 2.4e-12 47.2 0.5 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 RKO86601.1 - 0.038 14.1 0.2 0.077 13.1 0.2 1.5 1 0 0 1 1 1 0 HAS barrel domain EamA PF00892.20 RKO86602.1 - 2.2e-07 31.1 14.0 3e-05 24.2 0.7 2.1 2 0 0 2 2 2 2 EamA-like transporter family MRP-S26 PF14943.6 RKO86605.1 - 2.2e-05 24.5 1.2 0.0014 18.6 0.0 2.3 2 0 0 2 2 2 2 Mitochondrial ribosome subunit S26 Kelch_3 PF13415.6 RKO86606.1 - 0.00015 21.9 5.7 0.017 15.4 0.2 3.6 3 1 1 4 4 4 2 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO86606.1 - 0.00018 21.7 0.9 0.6 10.5 0.1 3.2 3 0 0 3 3 3 2 Kelch motif Kelch_4 PF13418.6 RKO86606.1 - 0.0033 17.4 0.3 0.47 10.5 0.0 2.7 2 0 0 2 2 2 1 Galactose oxidase, central domain SH3_9 PF14604.6 RKO86606.1 - 0.0033 17.2 0.0 0.025 14.4 0.0 2.2 2 0 0 2 2 2 1 Variant SH3 domain SH3_1 PF00018.28 RKO86606.1 - 0.0099 15.5 0.0 0.015 14.9 0.0 1.3 1 0 0 1 1 1 1 SH3 domain Kelch_5 PF13854.6 RKO86606.1 - 0.015 15.3 0.1 0.063 13.3 0.1 2.1 2 0 0 2 2 2 0 Kelch motif Kelch_1 PF01344.25 RKO86606.1 - 0.087 12.4 0.1 5.3 6.7 0.0 2.6 2 0 0 2 2 2 0 Kelch motif DUF3487 PF11990.8 RKO86606.1 - 0.13 12.1 1.0 0.36 10.7 0.3 2.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3487) HD PF01966.22 RKO86609.1 - 1.4e-12 47.9 0.2 2.9e-12 46.9 0.2 1.6 1 0 0 1 1 1 1 HD domain PDEase_I PF00233.19 RKO86609.1 - 0.001 18.8 0.0 0.0017 18.1 0.0 1.3 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase DUF4046 PF13255.6 RKO86609.1 - 0.1 13.2 0.2 0.27 11.8 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4046) Nuc_deoxyri_tr3 PF11071.8 RKO86609.1 - 0.12 12.4 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase YtoQ DWNN PF08783.11 RKO86610.1 - 8.2e-23 80.5 0.0 1.2e-22 79.9 0.0 1.2 1 0 0 1 1 1 1 DWNN domain Cytochrom_B561 PF03188.16 RKO86610.1 - 0.012 15.7 5.1 0.012 15.7 5.1 2.2 2 1 0 2 2 2 0 Eukaryotic cytochrome b561 F-box-like PF12937.7 RKO86611.1 - 1e-06 28.5 0.1 3e-06 27.0 0.1 1.8 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO86611.1 - 0.043 13.7 0.0 0.16 11.9 0.0 2.0 1 1 0 1 1 1 0 F-box domain GARS_A PF01071.19 RKO86614.1 - 2.7e-48 164.4 0.0 5.2e-48 163.4 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AIRS_C PF02769.22 RKO86614.1 - 1e-36 126.5 0.0 2.1e-36 125.4 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain GARS_C PF02843.16 RKO86614.1 - 1.8e-27 95.4 0.6 4.5e-27 94.2 0.6 1.7 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, C domain AIRS PF00586.24 RKO86614.1 - 3.6e-14 53.2 0.8 1.3e-13 51.4 0.8 2.0 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Peripla_BP_6 PF13458.6 RKO86615.1 - 2e-18 67.2 0.2 3.1e-16 60.0 0.1 2.5 2 0 0 2 2 2 2 Periplasmic binding protein TPR_2 PF07719.17 RKO86617.1 - 1.8e-13 49.5 0.7 0.00045 20.1 0.0 5.1 5 1 0 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.6 RKO86617.1 - 5e-12 45.3 0.1 2.1e-05 24.1 0.1 3.4 3 0 0 3 3 3 2 TPR repeat TPR_1 PF00515.28 RKO86617.1 - 3.2e-11 42.5 0.3 0.00017 21.3 0.0 4.3 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_8 PF13181.6 RKO86617.1 - 5.2e-11 41.9 0.1 6e-06 26.1 0.1 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO86617.1 - 5.7e-09 36.0 0.6 0.0019 18.9 0.0 4.3 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_17 PF13431.6 RKO86617.1 - 1.7e-08 34.2 1.9 6.4e-05 23.0 0.0 4.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 RKO86617.1 - 1.5e-07 31.6 6.9 0.0095 16.2 0.1 4.4 1 1 2 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.6 RKO86617.1 - 4.8e-06 27.0 0.4 0.0034 17.9 0.2 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO86617.1 - 7e-05 23.4 0.2 0.026 15.2 0.0 3.0 2 1 0 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO86617.1 - 7.7e-05 22.9 0.8 0.038 14.2 0.1 2.6 2 1 0 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 RKO86617.1 - 0.00053 19.8 0.2 1.7 8.9 0.0 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO86617.1 - 0.0013 19.2 3.2 9.9 7.0 0.0 4.3 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_15 PF13429.6 RKO86617.1 - 0.006 15.8 0.5 0.23 10.6 0.1 2.7 1 1 2 3 3 3 1 Tetratricopeptide repeat BTAD PF03704.17 RKO86617.1 - 0.0073 16.7 0.1 0.014 15.8 0.1 1.5 1 0 0 1 1 1 1 Bacterial transcriptional activator domain TPR_10 PF13374.6 RKO86617.1 - 0.018 14.9 7.3 0.033 14.1 0.1 4.0 5 0 0 5 5 4 0 Tetratricopeptide repeat TPR_20 PF14561.6 RKO86617.1 - 0.046 14.1 0.0 17 5.8 0.0 2.9 2 1 1 3 3 3 0 Tetratricopeptide repeat Arm PF00514.23 RKO86618.1 - 2.8e-32 109.7 20.2 2.8e-06 27.2 0.0 9.3 9 0 0 9 9 9 5 Armadillo/beta-catenin-like repeat HEAT PF02985.22 RKO86618.1 - 4.4e-19 66.9 9.8 0.012 15.9 0.0 7.9 7 0 0 7 7 7 5 HEAT repeat HEAT_2 PF13646.6 RKO86618.1 - 2.2e-16 60.0 12.0 0.0013 19.1 0.0 5.3 1 1 5 6 6 6 6 HEAT repeats Cnd1 PF12717.7 RKO86618.1 - 4.2e-12 46.4 0.0 0.0039 17.2 0.0 3.7 1 1 4 5 5 5 4 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 RKO86618.1 - 3.7e-11 43.3 24.8 0.00038 20.9 0.7 6.7 6 2 2 8 8 7 5 HEAT-like repeat Adaptin_N PF01602.20 RKO86618.1 - 4.2e-09 35.5 0.8 0.0038 15.9 0.2 3.5 2 1 1 3 3 3 2 Adaptin N terminal region CHASE6_C PF17150.4 RKO86618.1 - 7.1e-06 26.6 0.9 2.5 8.8 0.1 4.9 4 1 0 4 4 4 1 C-terminal domain of two-partite extracellular sensor domain DNA_alkylation PF08713.11 RKO86618.1 - 9.3e-06 25.5 0.0 2.7 7.6 0.0 4.4 3 2 2 5 5 5 2 DNA alkylation repair enzyme CLASP_N PF12348.8 RKO86618.1 - 1.4e-05 24.8 0.0 0.15 11.6 0.0 3.4 3 1 0 3 3 3 2 CLASP N terminal Arm_2 PF04826.13 RKO86618.1 - 0.0011 18.5 0.4 2.4 7.5 0.1 3.3 1 1 1 3 3 3 2 Armadillo-like Proteasom_PSMB PF10508.9 RKO86618.1 - 0.0014 17.2 1.6 0.072 11.6 0.0 2.7 2 1 0 2 2 2 1 Proteasome non-ATPase 26S subunit HEAT_UF PF18817.1 RKO86618.1 - 0.0023 18.1 1.1 0.57 10.5 0.0 4.5 6 0 0 6 6 5 1 Repeat of uncharacterized protein PH0542 RICTOR_V PF14668.6 RKO86618.1 - 0.0042 17.3 0.0 6.9 7.0 0.0 3.7 4 0 0 4 4 3 1 Rapamycin-insensitive companion of mTOR, domain 5 Vac14_Fab1_bd PF12755.7 RKO86618.1 - 0.0048 17.5 0.0 0.25 11.9 0.0 3.4 2 1 1 3 3 3 1 Vacuolar 14 Fab1-binding region Rcd1 PF04078.13 RKO86618.1 - 0.019 14.2 0.0 1.4 8.2 0.0 2.4 2 0 0 2 2 2 0 Cell differentiation family, Rcd1-like V-ATPase_H_C PF11698.8 RKO86618.1 - 0.036 14.2 0.0 27 4.9 0.0 3.8 4 0 0 4 4 4 0 V-ATPase subunit H Mo25 PF08569.11 RKO86618.1 - 0.05 13.0 0.0 4.8 6.4 0.0 2.5 1 1 2 3 3 3 0 Mo25-like RTP1_C1 PF10363.9 RKO86618.1 - 0.06 13.5 0.5 0.76 10.0 0.0 2.9 3 0 0 3 3 2 0 Required for nuclear transport of RNA pol II C-terminus 1 API5 PF05918.11 RKO86618.1 - 0.19 10.5 0.1 14 4.3 0.1 2.8 1 1 2 3 3 3 0 Apoptosis inhibitory protein 5 (API5) HEAT_PBS PF03130.16 RKO86618.1 - 1.4 9.8 0.0 1.4 9.8 0.0 5.7 7 0 0 7 7 4 0 PBS lyase HEAT-like repeat BUD22 PF09073.10 RKO86620.1 - 0.0017 17.8 11.0 0.0029 17.0 11.0 1.3 1 0 0 1 1 1 1 BUD22 DNA_pol_phi PF04931.13 RKO86620.1 - 0.45 8.5 16.0 0.67 8.0 16.0 1.2 1 0 0 1 1 1 0 DNA polymerase phi Voldacs PF03517.13 RKO86620.1 - 0.76 9.9 11.6 0.083 13.0 2.9 2.2 2 0 0 2 2 2 0 Regulator of volume decrease after cellular swelling MPP6 PF10175.9 RKO86620.1 - 1.6 9.2 10.4 0.29 11.6 4.1 2.4 2 0 0 2 2 2 0 M-phase phosphoprotein 6 HMG_box PF00505.19 RKO86622.1 - 9.6e-23 80.4 0.4 1.1e-22 80.2 0.4 1.0 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 RKO86622.1 - 9.8e-16 58.1 0.3 1.1e-15 58.0 0.3 1.0 1 0 0 1 1 1 1 HMG-box domain CHDNT PF08073.12 RKO86622.1 - 2e-06 27.7 0.0 2.7e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 CHDNT (NUC034) domain HMG_box_5 PF14887.6 RKO86622.1 - 0.00018 21.4 0.1 0.00024 21.0 0.1 1.3 1 0 0 1 1 1 1 HMG (high mobility group) box 5 TPR_14 PF13428.6 RKO86625.1 - 0.023 15.5 0.3 5.5 8.1 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat PPR_3 PF13812.6 RKO86625.1 - 0.051 13.7 0.0 0.1 12.7 0.0 1.6 2 0 0 2 2 2 0 Pentatricopeptide repeat domain PPR PF01535.20 RKO86625.1 - 0.066 13.5 0.0 0.13 12.6 0.0 1.5 1 0 0 1 1 1 0 PPR repeat PPR_2 PF13041.6 RKO86625.1 - 0.16 12.2 0.0 0.27 11.5 0.0 1.4 1 0 0 1 1 1 0 PPR repeat family TPR_4 PF07721.14 RKO86625.1 - 0.69 10.7 5.8 2.2 9.1 0.5 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat PPR_2 PF13041.6 RKO86626.1 - 8.9e-17 61.0 0.0 0.041 14.1 0.0 7.2 7 0 0 7 7 7 5 PPR repeat family PPR_3 PF13812.6 RKO86626.1 - 1.9e-16 59.9 0.0 9.3e-05 22.4 0.0 6.0 6 1 0 6 6 6 3 Pentatricopeptide repeat domain PPR PF01535.20 RKO86626.1 - 1.2e-07 31.5 4.2 7.4 7.1 0.0 8.7 10 0 0 10 10 10 1 PPR repeat PPR_long PF17177.4 RKO86626.1 - 2.4e-07 30.3 0.0 1.5 8.1 0.0 5.5 6 0 0 6 6 6 3 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 RKO86626.1 - 0.00016 21.3 0.0 0.24 11.1 0.0 5.0 6 0 0 6 6 6 1 PPR repeat HEAT_2 PF13646.6 RKO86626.1 - 0.42 11.0 3.3 0.91 10.0 0.8 2.9 4 0 0 4 4 4 0 HEAT repeats Mannosyl_trans3 PF11051.8 RKO86629.1 - 8.8e-27 94.1 0.0 1.1e-19 70.8 0.0 2.1 2 0 0 2 2 2 2 Mannosyltransferase putative DAD PF02109.16 RKO86630.1 - 2.2e-42 143.8 2.4 2.5e-42 143.6 2.4 1.0 1 0 0 1 1 1 1 DAD family UvdE PF03851.14 RKO86630.1 - 0.24 10.6 0.0 0.26 10.5 0.0 1.0 1 0 0 1 1 1 0 UV-endonuclease UvdE DUF4229 PF14012.6 RKO86630.1 - 0.64 10.2 3.8 0.18 11.9 0.5 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4229) F1F0-ATPsyn_F PF10791.9 RKO86631.1 - 1.8e-13 50.7 0.5 2.6e-13 50.2 0.5 1.2 1 0 0 1 1 1 1 Mitochondrial F1-F0 ATP synthase subunit F of fungi CPSase_L_D2 PF02786.17 RKO86636.1 - 8.9e-85 283.5 0.0 1.3e-84 282.9 0.0 1.2 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_sm_chain PF00988.22 RKO86636.1 - 5.3e-48 162.1 0.0 1e-47 161.1 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 RKO86636.1 - 1.1e-45 155.8 0.0 1.8e-45 155.1 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Dala_Dala_lig_C PF07478.13 RKO86636.1 - 3.1e-07 30.2 0.1 1.5e-06 27.9 0.0 2.0 2 0 0 2 2 2 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 RKO86636.1 - 2.4e-06 27.2 0.0 4.3e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Peptidase_C26 PF07722.13 RKO86636.1 - 1e-05 25.4 0.2 0.0013 18.5 0.2 2.3 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.24 RKO86636.1 - 0.00019 21.3 0.0 0.003 17.4 0.0 2.3 2 0 0 2 2 2 1 DJ-1/PfpI family ATPgrasp_Ter PF15632.6 RKO86636.1 - 0.007 16.1 0.0 0.013 15.2 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 RKO86636.1 - 0.035 14.2 0.0 0.11 12.5 0.0 1.9 2 0 0 2 2 2 0 ATP-grasp domain LRR_4 PF12799.7 RKO86639.1 - 7.5e-10 38.9 8.3 0.004 17.5 0.2 5.4 3 2 4 7 7 7 4 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 RKO86639.1 - 3.3e-07 29.8 6.2 0.12 12.5 0.0 5.8 6 0 0 6 6 6 2 Leucine Rich repeat LRR_8 PF13855.6 RKO86639.1 - 2.4e-05 24.0 0.8 0.0046 16.7 0.0 3.4 3 0 0 3 3 3 1 Leucine rich repeat DUF2058 PF09831.9 RKO86639.1 - 0.11 12.6 2.7 0.2 11.8 2.7 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2058) LRR_1 PF00560.33 RKO86639.1 - 0.28 11.9 15.1 2.3e+02 3.0 0.0 8.1 8 1 0 8 8 8 0 Leucine Rich Repeat DUF2992 PF11208.8 RKO86639.1 - 0.92 9.8 4.9 1.7 8.9 4.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2992) DpnD-PcfM PF14207.6 RKO86640.1 - 0.34 10.8 1.7 0.65 9.9 1.7 1.4 1 0 0 1 1 1 0 DpnD/PcfM-like protein zf-RING_11 PF17123.5 RKO86642.1 - 3.1e-09 36.4 0.4 5.5e-09 35.6 0.4 1.4 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_2 PF13639.6 RKO86642.1 - 8e-06 26.1 0.1 1.6e-05 25.1 0.1 1.5 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 RKO86642.1 - 0.0071 16.2 0.1 0.015 15.2 0.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 RKO86642.1 - 0.012 15.5 0.1 0.023 14.6 0.1 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 RKO86642.1 - 0.021 14.9 0.1 0.043 13.8 0.1 1.5 1 0 0 1 1 1 0 RING-type zinc-finger HEPN_SAV_6107 PF18726.1 RKO86642.1 - 0.022 15.3 0.3 0.059 13.9 0.0 1.7 2 0 0 2 2 2 0 SAV_6107-like HEPN zf-RING_5 PF14634.6 RKO86642.1 - 0.13 12.3 0.1 0.26 11.3 0.1 1.5 1 0 0 1 1 1 0 zinc-RING finger domain DNA_topoisoIV PF00521.20 RKO86644.1 - 1e-106 357.4 0.4 1e-106 357.4 0.4 1.7 2 0 0 2 2 2 1 DNA gyrase/topoisomerase IV, subunit A TOPRIM_C PF16898.5 RKO86644.1 - 4.5e-38 130.4 7.1 4.5e-38 130.4 7.1 2.4 2 0 0 2 2 2 1 C-terminal associated domain of TOPRIM DNA_gyraseB PF00204.25 RKO86644.1 - 1.1e-22 80.3 0.3 3e-22 78.9 0.3 1.7 1 0 0 1 1 1 1 DNA gyrase B HATPase_c PF02518.26 RKO86644.1 - 3.8e-15 56.4 0.0 1e-14 54.9 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 RKO86644.1 - 0.00025 21.2 0.0 0.0025 18.0 0.0 2.5 2 0 0 2 2 2 1 Toprim domain SapB_1 PF05184.15 RKO86644.1 - 0.07 13.2 0.6 5.2 7.2 0.0 3.6 3 0 0 3 3 3 0 Saposin-like type B, region 1 ArfGap PF01412.18 RKO86645.1 - 9e-29 99.9 0.1 1e-28 99.7 0.1 1.0 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf DUF3973 PF13119.6 RKO86645.1 - 0.09 12.9 0.7 0.13 12.4 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3973) WD40 PF00400.32 RKO86647.1 - 1.1e-46 155.8 27.1 4.3e-10 40.0 0.0 8.1 8 1 0 8 8 8 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO86647.1 - 3.4e-16 59.3 0.0 5e-07 29.9 0.1 4.8 1 1 4 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain Tup_N PF08581.10 RKO86647.1 - 1.3e-10 41.4 0.2 2.3e-10 40.6 0.2 1.4 1 0 0 1 1 1 1 Tup N-terminal Nup160 PF11715.8 RKO86647.1 - 9.4e-07 27.8 0.2 0.053 12.2 0.0 3.3 1 1 2 3 3 3 2 Nucleoporin Nup120/160 WD40_like PF17005.5 RKO86647.1 - 3.8e-06 26.5 0.1 0.0034 16.7 0.0 2.8 3 0 0 3 3 3 2 WD40-like domain eIF2A PF08662.11 RKO86647.1 - 0.00042 20.2 0.0 2.4 8.0 0.0 3.5 2 2 3 5 5 5 2 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 RKO86647.1 - 0.0023 17.0 0.1 9.2 5.1 0.0 3.7 1 1 3 4 4 4 1 WD40 region of Ge1, enhancer of mRNA-decapping protein PD40 PF07676.12 RKO86647.1 - 0.0082 16.1 0.1 3.6 7.6 0.0 3.4 3 0 0 3 3 3 1 WD40-like Beta Propeller Repeat Cytochrom_D1 PF02239.16 RKO86647.1 - 0.016 13.7 0.2 0.18 10.3 0.2 2.2 1 1 1 2 2 2 0 Cytochrome D1 heme domain Nucleoporin_N PF08801.11 RKO86647.1 - 0.068 11.9 0.0 3 6.5 0.0 2.8 1 1 1 2 2 2 0 Nup133 N terminal like Pex14_N PF04695.13 RKO86647.1 - 0.33 11.6 6.7 0.53 10.9 6.7 1.2 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region SHS2_Rpb7-N PF03876.17 RKO86648.1 - 7e-15 55.2 0.0 9.9e-15 54.7 0.0 1.2 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 RKO86648.1 - 1.5e-06 28.4 0.9 2.4e-06 27.8 0.9 1.3 1 0 0 1 1 1 1 S1 RNA binding domain INTS2 PF14750.6 RKO86649.1 - 8.9e-15 53.4 5.1 1.9e-14 52.3 5.1 1.5 1 1 0 1 1 1 1 Integrator complex subunit 2 CD24 PF14984.6 RKO86650.1 - 0.096 12.9 0.6 0.2 11.9 0.6 1.5 1 0 0 1 1 1 0 CD24 protein SNF2_N PF00176.23 RKO86651.1 - 6.4e-28 97.5 0.3 3.4e-26 91.8 0.1 2.1 2 0 0 2 2 2 2 SNF2 family N-terminal domain Myc_N PF01056.18 RKO86651.1 - 0.037 13.9 1.7 0.069 13.0 1.7 1.4 1 0 0 1 1 1 0 Myc amino-terminal region DUF2188 PF09954.9 RKO86651.1 - 0.073 13.2 0.8 0.15 12.3 0.8 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2188) ResIII PF04851.15 RKO86651.1 - 0.087 12.8 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit C1_1 PF00130.22 RKO86651.1 - 0.33 10.9 8.7 1.1 9.2 0.2 2.8 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) PHD PF00628.29 RKO86651.1 - 4.4 7.3 11.6 1.8 8.5 0.1 3.1 3 0 0 3 3 3 0 PHD-finger TPR_17 PF13431.6 RKO86653.1 - 4.6e-05 23.5 0.0 0.15 12.5 0.0 3.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 RKO86653.1 - 0.01 15.5 1.6 3.5 7.4 0.0 4.0 4 0 0 4 4 4 0 TPR repeat Glyco_hydro_48 PF02011.15 RKO86653.1 - 0.18 10.3 0.3 0.26 9.8 0.3 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 48 EST1_DNA_bind PF10373.9 RKO86654.1 - 2.9e-22 79.5 0.0 5.9e-22 78.5 0.0 1.5 1 1 0 1 1 1 1 Est1 DNA/RNA binding domain EST1 PF10374.9 RKO86654.1 - 3.1e-10 40.8 0.1 5.2e-10 40.1 0.1 1.4 1 0 0 1 1 1 1 Telomerase activating protein Est1 DUF4611 PF15387.6 RKO86654.1 - 2.3 8.5 5.1 15 5.9 1.6 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4611) DUF2564 PF10819.8 RKO86656.1 - 3.3 8.2 8.1 0.33 11.4 2.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2564) F-box-like PF12937.7 RKO86657.1 - 2.4e-06 27.3 4.0 1.5e-05 24.8 0.6 2.7 2 0 0 2 2 2 1 F-box-like LRR_4 PF12799.7 RKO86657.1 - 0.16 12.4 0.0 6.9 7.2 0.0 2.9 3 0 0 3 3 3 0 Leucine Rich repeats (2 copies) Usp PF00582.26 RKO86660.1 - 0.02 15.4 0.1 0.025 15.1 0.1 1.3 1 0 0 1 1 1 0 Universal stress protein family F-box-like PF12937.7 RKO86661.1 - 3.6e-06 26.8 0.6 7.3e-06 25.8 0.6 1.5 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO86661.1 - 0.0079 16.0 0.0 0.025 14.5 0.0 1.8 2 0 0 2 2 2 1 F-box domain Cyclin_N PF00134.23 RKO86662.1 - 0.0085 15.8 0.0 0.02 14.7 0.0 1.6 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 RKO86662.1 - 0.44 10.9 0.0 0.44 10.9 0.0 1.8 2 0 0 2 2 2 0 Cyclin Ank_5 PF13857.6 RKO86663.1 - 4.7e-33 112.8 14.6 0.0028 17.9 0.0 11.1 2 1 10 12 12 12 10 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO86663.1 - 7.4e-31 106.6 12.6 2.1e-07 31.4 0.6 5.8 1 1 4 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO86663.1 - 1.8e-29 101.7 12.7 0.00016 22.2 0.1 7.6 3 3 3 8 8 8 8 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO86663.1 - 3.6e-15 54.5 9.4 2.5 9.0 0.0 11.1 10 2 2 12 12 12 2 Ankyrin repeat DUF5049 PF16468.5 RKO86663.1 - 2.6e-06 27.2 0.3 19 5.3 0.0 7.5 4 2 5 9 9 9 0 Domain of unknown function (DUF5049) Ank PF00023.30 RKO86663.1 - 0.00015 22.1 3.5 1.2e+02 3.4 0.1 7.8 6 4 2 8 8 8 0 Ankyrin repeat DUF2344 PF10105.9 RKO86663.1 - 0.044 13.6 6.7 8.1 6.3 0.1 3.9 4 0 0 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2344) RIIa PF02197.17 RKO86663.1 - 0.15 11.8 0.0 1.3e+02 2.3 0.0 4.2 4 0 0 4 4 4 0 Regulatory subunit of type II PKA R-subunit zf-C3Hc3H PF13891.6 RKO86663.1 - 1.2 9.5 5.8 33 4.9 0.1 4.0 3 1 0 4 4 4 0 Potential DNA-binding domain TMEM215 PF15746.5 RKO86663.1 - 1.9 7.9 4.4 43 3.5 0.0 4.1 2 1 1 4 4 4 0 TMEM215 family DIM PF08194.12 RKO86664.1 - 0.65 10.2 3.6 1 9.6 3.6 1.3 1 0 0 1 1 1 0 DIM protein WD40 PF00400.32 RKO86665.1 - 8.4e-37 124.5 18.8 1.2e-08 35.4 0.3 5.8 6 0 0 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO86665.1 - 5e-13 49.2 1.4 0.021 15.1 0.0 5.3 1 1 4 5 5 5 5 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 RKO86665.1 - 2e-06 27.3 1.3 0.028 13.7 0.1 3.6 3 1 2 5 5 5 2 WD40-like domain Ge1_WD40 PF16529.5 RKO86665.1 - 1.8e-05 23.9 0.1 0.012 14.6 0.0 2.7 2 1 0 2 2 2 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 RKO86665.1 - 0.00032 19.5 1.4 1.2 7.7 0.1 3.4 1 1 1 3 3 3 2 Nucleoporin Nup120/160 LisH_TPL PF17814.1 RKO86665.1 - 0.022 14.4 0.0 0.049 13.3 0.0 1.6 1 0 0 1 1 1 0 LisH-like dimerisation domain Cytochrom_D1 PF02239.16 RKO86665.1 - 0.051 12.1 0.3 0.14 10.7 0.2 1.6 1 1 1 2 2 2 0 Cytochrome D1 heme domain PYC_OADA PF02436.18 RKO86665.1 - 0.16 11.7 0.3 0.37 10.5 0.2 1.6 2 0 0 2 2 2 0 Conserved carboxylase domain Med18 PF09637.10 RKO86667.1 - 0.0025 17.7 0.0 1.2 8.9 0.0 2.0 1 1 1 2 2 2 2 Med18 protein Prot_ATP_OB_N PF17758.1 RKO86667.1 - 0.13 12.0 0.0 0.23 11.1 0.0 1.4 1 0 0 1 1 1 0 Proteasomal ATPase OB N-terminal domain Band_7 PF01145.25 RKO86668.1 - 9.7e-07 29.0 0.1 1.4e-06 28.4 0.1 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family DOT1 PF08123.13 RKO86673.1 - 6.9e-30 104.1 0.0 8.5e-30 103.8 0.0 1.1 1 0 0 1 1 1 1 Histone methylation protein DOT1 RrnaAD PF00398.20 RKO86673.1 - 0.0017 17.5 0.0 0.0024 17.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_23 PF13489.6 RKO86673.1 - 0.01 15.7 0.0 0.013 15.3 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 RKO86673.1 - 0.014 16.0 0.0 0.024 15.3 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_25 PF13649.6 RKO86673.1 - 0.015 16.0 0.0 0.028 15.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 RKO86673.1 - 0.039 13.2 0.0 0.054 12.8 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Imm3 PF14425.6 RKO86673.1 - 0.064 13.3 0.0 0.08 13.0 0.0 1.3 1 0 0 1 1 1 0 Immunity protein Imm3 Methyltransf_31 PF13847.6 RKO86673.1 - 0.13 12.0 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_2 PF00891.18 RKO86673.1 - 0.14 11.4 0.0 0.16 11.2 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase domain Asp PF00026.23 RKO86674.1 - 7.5e-37 127.4 0.5 5.7e-18 65.4 0.0 2.1 2 0 0 2 2 2 2 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO86674.1 - 0.0032 17.7 0.4 0.0032 17.7 0.4 2.1 2 1 0 2 2 2 1 Xylanase inhibitor N-terminal WHEP-TRS PF00458.20 RKO86676.1 - 9.3e-13 48.1 6.4 1.9e-12 47.2 6.4 1.5 1 0 0 1 1 1 1 WHEP-TRS domain tRNA-synt_2b PF00587.25 RKO86676.1 - 3e-07 30.6 0.0 5.7e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Zwilch PF09817.9 RKO86676.1 - 0.0029 16.1 0.0 0.0044 15.5 0.0 1.2 1 0 0 1 1 1 1 RZZ complex, subunit zwilch DEC-1_N PF04625.13 RKO86677.1 - 0.015 14.4 1.8 0.019 14.0 1.8 1.1 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Ldh_1_N PF00056.23 RKO86679.1 - 6.3e-45 152.7 0.6 9.7e-45 152.1 0.6 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 RKO86679.1 - 4.3e-36 124.4 0.7 6.7e-36 123.7 0.2 1.5 2 0 0 2 2 2 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain 3Beta_HSD PF01073.19 RKO86679.1 - 0.00035 19.7 0.0 0.00047 19.3 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family THF_DHG_CYH_C PF02882.19 RKO86679.1 - 0.012 15.0 1.5 0.049 13.0 0.3 2.4 2 1 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Glyco_hydro_4 PF02056.16 RKO86679.1 - 0.014 15.0 0.8 1.6 8.3 0.2 2.3 1 1 1 2 2 2 0 Family 4 glycosyl hydrolase Semialdhyde_dh PF01118.24 RKO86679.1 - 0.016 15.7 1.5 0.03 14.8 0.2 2.2 2 1 1 3 3 3 0 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.20 RKO86679.1 - 0.025 14.7 0.0 0.07 13.3 0.0 1.7 2 0 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus Zn-ribbon_8 PF09723.10 RKO86680.1 - 0.031 14.4 1.1 0.055 13.6 1.1 1.4 1 0 0 1 1 1 0 Zinc ribbon domain DUF2367 PF10164.9 RKO86680.1 - 0.047 14.2 0.2 0.061 13.8 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2367) SAM_2 PF07647.17 RKO86682.1 - 8.5e-07 29.0 0.4 0.0016 18.5 0.1 2.7 3 0 0 3 3 3 2 SAM domain (Sterile alpha motif) SAM_PNT PF02198.16 RKO86682.1 - 0.00029 20.7 0.1 0.044 13.8 0.0 3.1 3 0 0 3 3 3 1 Sterile alpha motif (SAM)/Pointed domain SAM_Ste50p PF09235.10 RKO86682.1 - 0.0071 16.6 0.5 11 6.3 0.0 3.2 3 0 0 3 3 3 2 Ste50p, sterile alpha motif SAM_1 PF00536.30 RKO86682.1 - 0.15 12.5 0.2 68 4.0 0.0 3.2 3 0 0 3 3 3 0 SAM domain (Sterile alpha motif) DUF3283 PF11686.8 RKO86683.1 - 0.16 11.9 0.1 0.25 11.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3283) Vfa1 PF08432.10 RKO86684.1 - 2.4 8.5 19.9 0.95 9.8 14.5 2.0 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 Gti1_Pac2 PF09729.9 RKO86684.1 - 4.1 7.5 9.4 17 5.4 4.6 2.2 2 0 0 2 2 2 0 Gti1/Pac2 family Cytochrom_B561 PF03188.16 RKO86686.1 - 2.3e-21 76.4 2.3 3.8e-21 75.7 2.3 1.3 1 0 0 1 1 1 1 Eukaryotic cytochrome b561 DUF4079 PF13301.6 RKO86686.1 - 0.14 12.3 7.3 0.61 10.2 7.3 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) Cyclin_N PF00134.23 RKO86687.1 - 2.1e-07 30.7 0.0 3e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 Cyclin, N-terminal domain ADH_N PF08240.12 RKO86689.1 - 4.1e-05 23.4 0.0 8.1e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 RKO86689.1 - 0.00011 23.2 0.0 0.00021 22.3 0.0 1.6 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 RKO86689.1 - 0.00027 20.9 0.0 0.001 19.1 0.0 1.9 2 0 0 2 2 2 1 Zinc-binding dehydrogenase Aminotran_1_2 PF00155.21 RKO86694.1 - 0.042 13.0 0.0 1 8.5 0.0 2.0 1 1 1 2 2 2 0 Aminotransferase class I and II MFS_1 PF07690.16 RKO86696.1 - 1e-48 166.1 75.5 1.3e-25 90.1 42.9 5.3 2 2 2 4 4 4 4 Major Facilitator Superfamily Fzo_mitofusin PF04799.13 RKO86696.1 - 0.79 9.3 5.8 1.4 8.4 0.3 2.3 2 0 0 2 2 2 0 fzo-like conserved region F-box-like PF12937.7 RKO86697.1 - 9.1e-11 41.5 2.3 9.1e-11 41.5 2.3 3.8 4 0 0 4 4 4 1 F-box-like F-box PF00646.33 RKO86697.1 - 0.028 14.3 1.5 0.16 11.9 0.7 2.8 2 1 0 2 2 2 0 F-box domain ABC_membrane PF00664.23 RKO86699.1 - 1.3e-38 133.2 7.1 1.7e-38 132.9 7.1 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 RKO86699.1 - 8.3e-34 117.0 0.0 1.9e-33 115.9 0.0 1.6 2 0 0 2 2 1 1 ABC transporter SMC_N PF02463.19 RKO86699.1 - 0.00013 21.5 0.0 0.014 14.8 0.0 2.3 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 RKO86699.1 - 0.00033 21.1 0.0 0.00082 19.8 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 RKO86699.1 - 0.0023 17.8 0.1 0.018 14.9 0.0 2.0 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 RKO86699.1 - 0.0043 17.5 0.0 0.054 13.9 0.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 RKO86699.1 - 0.0059 16.4 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 RKO86699.1 - 0.0074 16.6 0.0 0.04 14.2 0.0 2.2 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 RKO86699.1 - 0.025 14.3 0.0 0.078 12.7 0.0 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 RKO86699.1 - 0.04 13.8 0.0 0.078 12.9 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_25 PF13481.6 RKO86699.1 - 0.066 12.8 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 RKO86699.1 - 0.076 12.5 0.0 0.14 11.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region MMR_HSR1 PF01926.23 RKO86699.1 - 0.091 12.8 0.0 0.23 11.6 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_5 PF07728.14 RKO86699.1 - 0.13 12.3 0.0 1.1 9.2 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_23 PF13476.6 RKO86699.1 - 0.13 12.8 0.0 0.3 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 RKO86699.1 - 0.14 12.1 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain Rep_fac-A_C PF08646.10 RKO86700.1 - 2.4e-51 173.3 3.7 3.3e-50 169.6 1.3 2.3 2 0 0 2 2 2 1 Replication factor-A C terminal domain REPA_OB_2 PF16900.5 RKO86700.1 - 2.1e-33 114.1 2.3 3.3e-33 113.5 0.2 2.3 3 0 0 3 3 3 1 Replication protein A OB domain Rep-A_N PF04057.12 RKO86700.1 - 1.1e-09 38.2 0.1 3.3e-09 36.7 0.1 1.9 2 0 0 2 2 2 1 Replication factor-A protein 1, N-terminal domain tRNA_anti-codon PF01336.25 RKO86700.1 - 1.1e-09 38.1 0.0 3.8e-07 30.0 0.0 3.0 3 0 0 3 3 3 1 OB-fold nucleic acid binding domain DUF223 PF02721.14 RKO86700.1 - 0.0035 17.6 0.0 0.01 16.1 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function DUF223 CDC24_OB3 PF17244.2 RKO86700.1 - 0.067 12.9 0.5 0.23 11.1 0.1 2.1 3 0 0 3 3 3 0 Cell division control protein 24, OB domain 3 Pkinase PF00069.25 RKO86701.1 - 1.4e-72 244.3 0.0 1.6e-72 244.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO86701.1 - 6.1e-36 124.0 0.0 1.2e-35 123.1 0.0 1.4 2 0 0 2 2 2 1 Protein tyrosine kinase RIO1 PF01163.22 RKO86701.1 - 0.0038 16.9 0.6 0.0081 15.8 0.6 1.4 1 1 0 1 1 1 1 RIO1 family Kinase-like PF14531.6 RKO86701.1 - 0.014 14.8 0.0 0.024 13.9 0.0 1.5 1 1 0 1 1 1 0 Kinase-like APH PF01636.23 RKO86701.1 - 0.035 14.0 0.0 0.086 12.7 0.0 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family Ammonium_transp PF00909.21 RKO86703.1 - 2e-32 112.4 12.5 2.3e-32 112.2 12.5 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Glyco_hydro_1 PF00232.18 RKO86704.1 - 7.8e-109 364.1 10.3 1.1e-84 284.5 7.9 3.9 2 1 0 2 2 2 2 Glycosyl hydrolase family 1 TFIIIC_delta PF12657.7 RKO86706.1 - 1e-09 38.6 0.0 2.6e-09 37.3 0.0 1.6 1 0 0 1 1 1 1 Transcription factor IIIC subunit delta N-term zf-TFIIIC PF12660.7 RKO86706.1 - 5.9e-08 32.6 4.6 0.00026 20.9 2.1 2.7 2 0 0 2 2 2 2 Putative zinc-finger of transcription factor IIIC complex LTV PF04180.14 RKO86707.1 - 1.9e-64 218.8 23.6 3.5e-60 204.8 17.2 3.6 1 1 1 2 2 2 2 Low temperature viability protein LAT PF15234.6 RKO86707.1 - 6.2 6.5 9.9 1.2 8.8 4.1 2.5 2 0 0 2 2 2 0 Linker for activation of T-cells RNase_HII PF01351.18 RKO86708.1 - 4.3e-26 92.0 0.0 5.3e-26 91.7 0.0 1.1 1 0 0 1 1 1 1 Ribonuclease HII GCM PF03615.15 RKO86709.1 - 0.076 12.9 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 GCM motif protein Metallophos PF00149.28 RKO86714.1 - 0.0057 17.2 0.3 0.02 15.4 0.3 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 RKO86714.1 - 0.13 12.5 0.1 0.25 11.5 0.1 1.6 1 1 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain FlxA PF14282.6 RKO86715.1 - 0.15 12.1 0.1 0.15 12.1 0.1 2.2 3 0 0 3 3 3 0 FlxA-like protein ERM PF00769.19 RKO86715.1 - 6.8 6.4 9.1 0.35 10.7 3.7 1.5 2 0 0 2 2 2 0 Ezrin/radixin/moesin family ADIP PF11559.8 RKO86717.1 - 1.6 8.8 12.6 2.4 8.3 12.6 1.2 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding CDC73_N PF16050.5 RKO86717.1 - 3.5 6.9 13.1 3.3 7.0 0.0 2.2 2 0 0 2 2 2 0 Paf1 complex subunit CDC73 N-terminal RNA_pol_Rpc4 PF05132.14 RKO86717.1 - 5.1 7.5 19.0 2 8.8 1.6 2.2 2 0 0 2 2 2 0 RNA polymerase III RPC4 Rrn6 PF10214.9 RKO86717.1 - 5.9 5.2 6.6 6.8 5.0 6.6 1.2 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DDRGK PF09756.9 RKO86717.1 - 6.8 6.2 20.9 10 5.6 20.9 1.2 1 0 0 1 1 1 0 DDRGK domain Oxidored_FMN PF00724.20 RKO86718.1 - 1.2e-27 97.1 0.0 1.4e-27 96.9 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family CBM_25 PF03423.13 RKO86718.1 - 0.019 15.2 0.0 0.029 14.6 0.0 1.3 1 0 0 1 1 1 0 Carbohydrate binding domain (family 25) Hexapep PF00132.24 RKO86719.1 - 3.8e-11 42.2 13.4 4e-05 23.2 5.2 4.6 1 1 3 4 4 4 4 Bacterial transferase hexapeptide (six repeats) W2 PF02020.18 RKO86719.1 - 1.9e-07 31.1 0.1 1.9e-07 31.1 0.1 1.8 2 0 0 2 2 2 1 eIF4-gamma/eIF5/eIF2-epsilon Hexapep_2 PF14602.6 RKO86719.1 - 0.00028 20.6 6.3 0.0016 18.1 1.0 3.5 2 1 1 3 3 3 1 Hexapeptide repeat of succinyl-transferase DUF4954 PF16314.5 RKO86719.1 - 0.00087 17.5 1.8 0.0013 17.0 1.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) Fucokinase PF07959.12 RKO86719.1 - 0.024 13.6 0.4 0.043 12.7 0.4 1.4 1 0 0 1 1 1 0 L-fucokinase LRR_4 PF12799.7 RKO86720.1 - 0.00057 20.2 5.6 0.013 16.0 1.5 1.9 1 1 1 2 2 2 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO86720.1 - 0.0087 15.8 0.5 0.016 15.0 0.5 1.4 1 0 0 1 1 1 1 Leucine rich repeat Wtap PF17098.5 RKO86721.1 - 3.9e-08 33.4 6.0 4.5e-08 33.2 3.0 1.9 1 1 1 2 2 2 1 WTAP/Mum2p family Herpes_BLRF2 PF05812.12 RKO86721.1 - 0.021 15.0 0.7 0.04 14.1 0.7 1.4 1 0 0 1 1 1 0 Herpesvirus BLRF2 protein GAS PF13851.6 RKO86721.1 - 0.039 13.3 7.3 0.14 11.5 7.3 1.8 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding EspB_PE PF18625.1 RKO86721.1 - 0.074 13.5 1.3 0.074 13.5 1.3 1.8 2 1 0 2 2 2 0 ESX-1 secreted protein B PE domain DUF5524 PF17662.1 RKO86721.1 - 0.15 11.4 1.2 0.19 11.1 1.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5524) Exonuc_VII_L PF02601.15 RKO86721.1 - 0.17 11.4 4.5 0.23 11.0 4.5 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF4201 PF13870.6 RKO86721.1 - 0.27 10.9 7.4 0.29 10.9 2.0 1.9 1 1 0 2 2 2 0 Domain of unknown function (DUF4201) Atg14 PF10186.9 RKO86721.1 - 0.44 9.6 6.0 0.83 8.7 6.1 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Cnn_1N PF07989.11 RKO86721.1 - 0.52 10.5 4.6 2.3 8.4 0.9 2.4 2 1 0 2 2 2 0 Centrosomin N-terminal motif 1 Rho_Binding PF08912.11 RKO86721.1 - 0.66 10.8 4.6 1.9 9.4 0.3 2.7 2 1 1 3 3 3 0 Rho Binding TMF_DNA_bd PF12329.8 RKO86721.1 - 0.68 10.0 7.1 20 5.3 0.4 3.0 2 1 1 3 3 3 0 TATA element modulatory factor 1 DNA binding OmpH PF03938.14 RKO86721.1 - 0.92 9.8 7.0 8.8 6.7 7.0 2.0 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) LapA_dom PF06305.11 RKO86721.1 - 1.3 8.9 4.1 6.4 6.7 0.0 2.6 3 0 0 3 3 3 0 Lipopolysaccharide assembly protein A domain YabA PF06156.13 RKO86721.1 - 1.4 9.6 3.9 2.9 8.6 0.3 2.4 1 1 1 2 2 2 0 Initiation control protein YabA ZapB PF06005.12 RKO86721.1 - 2.3 8.7 10.1 17 5.9 6.8 2.7 1 1 1 2 2 2 0 Cell division protein ZapB PKcGMP_CC PF16808.5 RKO86721.1 - 2.5 8.0 5.2 1 9.3 0.4 2.5 2 1 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase BRCT PF00533.26 RKO86723.1 - 1.6e-05 25.1 0.0 3.1e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain BRCT_2 PF16589.5 RKO86723.1 - 0.00037 20.8 0.0 0.00072 19.9 0.0 1.5 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain PTCB-BRCT PF12738.7 RKO86723.1 - 0.0012 18.7 0.0 0.0022 17.9 0.0 1.4 1 0 0 1 1 1 1 twin BRCT domain Coa1 PF08695.10 RKO86726.1 - 4.3e-18 65.1 0.0 4.7e-18 65.0 0.0 1.0 1 0 0 1 1 1 1 Cytochrome oxidase complex assembly protein 1 V-ATPase_H_N PF03224.14 RKO86727.1 - 5.2e-83 278.9 2.3 7.6e-83 278.4 2.3 1.2 1 0 0 1 1 1 1 V-ATPase subunit H V-ATPase_H_C PF11698.8 RKO86727.1 - 5.9e-37 126.3 1.8 4.1e-35 120.4 0.2 3.2 2 1 2 4 4 4 1 V-ATPase subunit H Cnd1 PF12717.7 RKO86727.1 - 1.2e-06 28.6 0.3 2.3e-05 24.5 0.0 2.8 2 1 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 RKO86727.1 - 0.00034 19.3 1.8 0.0018 17.0 0.4 2.2 2 0 0 2 2 2 1 Adaptin N terminal region CARD PF00619.21 RKO86727.1 - 0.018 15.0 0.1 0.3 11.1 0.0 3.0 2 1 1 3 3 3 0 Caspase recruitment domain HEAT PF02985.22 RKO86727.1 - 0.02 15.1 0.0 7.9 7.0 0.0 3.4 2 0 0 2 2 2 0 HEAT repeat CTNNBL PF08216.11 RKO86727.1 - 0.099 12.8 0.0 0.4 10.9 0.0 2.1 2 0 0 2 2 2 0 Catenin-beta-like, Arm-motif containing nuclear Beta-lactamase PF00144.24 RKO86728.1 - 1.5e-42 146.1 0.0 1.8e-42 145.8 0.0 1.0 1 0 0 1 1 1 1 Beta-lactamase AMP-binding PF00501.28 RKO86729.1 - 3.9e-22 78.4 0.0 4.9e-22 78.1 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme RhoGAP PF00620.27 RKO86732.1 - 0.00058 19.7 0.0 0.0011 18.7 0.0 1.5 1 0 0 1 1 1 1 RhoGAP domain DEP PF00610.21 RKO86732.1 - 0.0013 18.8 0.0 0.0048 16.9 0.0 2.1 1 0 0 1 1 1 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) ERM PF00769.19 RKO86732.1 - 0.38 10.5 4.9 0.78 9.5 4.9 1.5 1 0 0 1 1 1 0 Ezrin/radixin/moesin family RRM_1 PF00076.22 RKO86733.1 - 3.8e-11 42.6 0.0 5.8e-11 42.0 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FoP_duplication PF13865.6 RKO86733.1 - 8.5e-09 35.8 16.1 3.8e-08 33.8 2.1 3.6 3 0 0 3 3 3 2 C-terminal duplication domain of Friend of PRMT1 POP1 PF06978.11 RKO86734.1 - 5.9 6.8 7.3 1.9 8.4 4.1 1.7 2 0 0 2 2 2 0 Ribonucleases P/MRP protein subunit POP1 T2SSE_N PF05157.15 RKO86735.1 - 0.13 12.5 0.2 0.47 10.7 0.0 1.9 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein E, N-terminal domain 3HCDH_N PF02737.18 RKO86736.1 - 4.7e-25 88.5 0.0 6.4e-19 68.5 0.0 2.2 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 RKO86736.1 - 1.6e-18 67.1 0.0 2.9e-18 66.3 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Ldl_recept_b PF00058.17 RKO86736.1 - 9.3e-06 26.0 0.7 1.4 9.5 0.0 4.9 5 0 0 5 5 5 2 Low-density lipoprotein receptor repeat class B SGL PF08450.12 RKO86736.1 - 0.0055 16.3 0.0 1.9 8.0 0.0 2.7 2 1 1 3 3 3 2 SMP-30/Gluconolactonase/LRE-like region ABC_tran PF00005.27 RKO86737.1 - 3.8e-10 40.4 0.0 4.1e-10 40.3 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 RKO86737.1 - 4.6e-05 23.4 0.1 5.3e-05 23.2 0.1 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 RKO86737.1 - 7.2e-05 22.4 0.0 8.1e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 RKO86737.1 - 0.00018 21.2 0.1 0.0003 20.5 0.1 1.5 1 1 0 1 1 1 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 RKO86737.1 - 0.0036 17.4 0.0 0.0042 17.2 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Arf PF00025.21 RKO86737.1 - 0.0046 16.4 0.0 0.0057 16.1 0.0 1.3 1 0 0 1 1 1 1 ADP-ribosylation factor family AAA_23 PF13476.6 RKO86737.1 - 0.005 17.4 0.1 0.0056 17.2 0.1 1.1 1 0 0 1 1 1 1 AAA domain FtsK_SpoIIIE PF01580.18 RKO86737.1 - 0.0054 16.1 0.0 0.051 12.9 0.0 1.9 2 0 0 2 2 2 1 FtsK/SpoIIIE family RsgA_GTPase PF03193.16 RKO86737.1 - 0.0056 16.6 0.0 0.0066 16.4 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 RKO86737.1 - 0.011 16.1 0.0 0.011 16.1 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_28 PF13521.6 RKO86737.1 - 0.019 15.2 0.0 0.022 15.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_27 PF13514.6 RKO86737.1 - 0.025 14.2 0.0 0.031 13.9 0.0 1.1 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 RKO86737.1 - 0.029 13.6 0.0 0.036 13.3 0.0 1.1 1 0 0 1 1 1 0 Zeta toxin AAA_15 PF13175.6 RKO86737.1 - 0.048 13.4 0.1 0.052 13.3 0.1 1.1 1 0 0 1 1 1 0 AAA ATPase domain Roc PF08477.13 RKO86737.1 - 0.074 13.3 0.0 0.092 13.0 0.0 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_33 PF13671.6 RKO86737.1 - 0.08 13.1 0.2 0.11 12.7 0.2 1.2 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 RKO86737.1 - 0.099 13.2 0.0 0.12 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 RKO86737.1 - 0.12 12.3 0.4 0.15 11.9 0.4 1.2 1 0 0 1 1 1 0 NACHT domain DUF815 PF05673.13 RKO86737.1 - 0.14 11.3 0.1 0.18 10.9 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_13 PF13166.6 RKO86737.1 - 0.17 10.5 0.1 0.18 10.4 0.1 1.0 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 RKO86737.1 - 0.21 11.9 0.0 0.22 11.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain DUF3584 PF12128.8 RKO86737.1 - 0.22 9.0 0.1 0.28 8.7 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Dynamin_N PF00350.23 RKO86737.1 - 0.23 11.5 0.1 0.3 11.1 0.1 1.1 1 0 0 1 1 1 0 Dynamin family SRP54 PF00448.22 RKO86737.1 - 0.34 10.5 0.4 0.45 10.1 0.4 1.1 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Phosphodiest PF01663.22 RKO86739.1 - 5.2e-22 78.9 0.0 4.9e-20 72.4 0.0 2.1 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Phosphodiest PF01663.22 RKO86740.1 - 6.7e-22 78.6 1.6 6.2e-21 75.4 1.6 1.9 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Metalloenzyme PF01676.18 RKO86740.1 - 2.2e-06 27.3 0.1 2.8e-06 26.9 0.1 1.1 1 0 0 1 1 1 1 Metalloenzyme superfamily DUF229 PF02995.17 RKO86740.1 - 0.0095 14.6 0.1 0.012 14.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF229) PglZ PF08665.12 RKO86740.1 - 0.013 15.6 0.0 0.024 14.7 0.0 1.4 2 0 0 2 2 2 0 PglZ domain Sulfatase PF00884.23 RKO86740.1 - 0.014 14.8 0.0 0.02 14.3 0.0 1.4 1 0 0 1 1 1 0 Sulfatase Phos_pyr_kin PF08543.12 RKO86740.1 - 0.034 13.5 0.1 0.045 13.1 0.1 1.2 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase Spc7 PF08317.11 RKO86741.1 - 0.014 14.2 12.6 0.045 12.6 5.6 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein zf-C4H2 PF10146.9 RKO86741.1 - 0.033 14.5 0.8 0.033 14.5 0.8 1.8 1 1 1 2 2 2 0 Zinc finger-containing protein APG6_N PF17675.1 RKO86741.1 - 0.98 10.0 17.3 0.26 11.8 9.4 2.4 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF4407 PF14362.6 RKO86741.1 - 2.7 7.3 13.4 5.7 6.2 13.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TMF_TATA_bd PF12325.8 RKO86741.1 - 3.1 8.1 10.7 0.81 9.9 5.3 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding PRKG1_interact PF15898.5 RKO86741.1 - 3.1 8.7 11.8 0.96 10.4 7.1 2.1 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain DivIC PF04977.15 RKO86741.1 - 8.9 6.2 9.2 18 5.2 5.3 3.0 2 1 1 3 3 3 0 Septum formation initiator PDEase_I PF00233.19 RKO86742.1 - 1.9e-81 273.3 0.1 2.1e-81 273.2 0.1 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase NIF PF03031.18 RKO86745.1 - 2e-57 193.3 0.2 2.2e-57 193.2 0.2 1.0 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase I-set PF07679.16 RKO86745.1 - 0.11 12.6 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Immunoglobulin I-set domain DUF4826 PF16108.5 RKO86747.1 - 0.064 13.5 0.0 0.071 13.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4826) Rsm22 PF09243.10 RKO86748.1 - 0.097 11.9 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 TRAM_LAG1_CLN8 PF03798.16 RKO86750.1 - 6.7e-07 29.2 0.1 8.5e-07 28.9 0.1 1.1 1 0 0 1 1 1 1 TLC domain Pheromone PF08015.11 RKO86750.1 - 0.12 13.4 0.4 0.77 10.8 0.0 2.3 2 0 0 2 2 2 0 Fungal mating-type pheromone SBP_bac_8 PF13416.6 RKO86751.1 - 1.8e-12 47.7 0.0 2.7e-12 47.1 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 RKO86751.1 - 4.8e-07 30.0 0.1 1.2e-06 28.7 0.1 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SH3_9 PF14604.6 RKO86751.1 - 0.00016 21.5 0.0 0.00032 20.5 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain Baculo_PEP_C PF04513.12 RKO86753.1 - 0.0011 19.0 7.0 0.013 15.6 1.4 3.7 2 2 1 3 3 3 1 Baculovirus polyhedron envelope protein, PEP, C terminus SKA2 PF16740.5 RKO86753.1 - 0.0014 18.4 3.7 0.014 15.2 0.2 2.9 3 0 0 3 3 3 1 Spindle and kinetochore-associated protein 2 CdvA PF18822.1 RKO86753.1 - 0.03 14.1 4.0 5.1 7.0 0.0 4.1 4 0 0 4 4 4 0 CdvA-like coiled-coil domain DUF1640 PF07798.11 RKO86753.1 - 0.059 13.4 6.5 0.075 13.1 0.1 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF1640) DUF1664 PF07889.12 RKO86753.1 - 0.084 12.9 6.1 1.3 9.0 0.5 3.8 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) LPP PF04728.13 RKO86753.1 - 0.12 12.7 11.9 4.3 7.8 0.0 4.6 4 0 0 4 4 4 0 Lipoprotein leucine-zipper NPV_P10 PF05531.12 RKO86753.1 - 0.21 12.1 5.5 1.2 9.7 0.2 3.8 3 2 1 4 4 4 0 Nucleopolyhedrovirus P10 protein Syntaxin PF00804.25 RKO86753.1 - 0.33 10.6 7.1 0.24 11.1 1.4 2.8 2 2 1 3 3 3 0 Syntaxin betaPIX_CC PF16523.5 RKO86753.1 - 0.36 10.7 3.5 1.2 9.0 0.6 3.0 3 1 1 4 4 4 0 betaPIX coiled coil Yuri_gagarin PF15934.5 RKO86753.1 - 0.48 10.2 4.0 7.6 6.3 1.1 3.3 2 1 0 2 2 2 0 Yuri gagarin Spc7 PF08317.11 RKO86753.1 - 0.57 9.0 9.4 0.056 12.3 1.8 2.4 1 1 2 3 3 3 0 Spc7 kinetochore protein HAP1_N PF04849.13 RKO86753.1 - 1.4 8.0 11.2 0.54 9.4 2.4 3.0 2 1 1 3 3 3 0 HAP1 N-terminal conserved region TPR_MLP1_2 PF07926.12 RKO86753.1 - 5.5 7.1 16.2 15 5.6 0.6 3.3 3 1 0 3 3 3 0 TPR/MLP1/MLP2-like protein Fez1 PF06818.15 RKO86753.1 - 7.4 7.0 10.1 9.6 6.6 4.6 2.4 1 1 1 2 2 2 0 Fez1 Ribosomal_60s PF00428.19 RKO86754.1 - 2.9 8.5 7.6 0.54 10.9 0.5 2.7 2 0 0 2 2 2 0 60s Acidic ribosomal protein Kelch_3 PF13415.6 RKO86755.1 - 1.8e-07 31.3 2.2 0.024 14.9 0.0 3.8 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO86755.1 - 2.1e-07 31.0 0.4 0.0012 19.0 0.0 3.5 3 0 0 3 3 3 2 Kelch motif Kelch_5 PF13854.6 RKO86755.1 - 2e-06 27.6 6.3 0.0069 16.4 0.3 3.5 3 0 0 3 3 3 2 Kelch motif Kelch_4 PF13418.6 RKO86755.1 - 1e-05 25.4 2.1 0.71 9.9 0.4 3.9 3 1 0 3 3 3 2 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO86755.1 - 1.4e-05 24.6 0.3 0.21 11.2 0.0 3.6 3 0 0 3 3 3 2 Kelch motif Kelch_6 PF13964.6 RKO86756.1 - 0.013 15.8 0.1 2.9 8.3 0.0 3.0 3 0 0 3 3 3 0 Kelch motif Kelch_3 PF13415.6 RKO86756.1 - 0.017 15.4 9.4 2.5 8.5 0.0 4.3 3 1 1 4 4 4 0 Galactose oxidase, central domain Asp PF00026.23 RKO86757.1 - 5.3e-22 78.6 0.0 7.4e-22 78.2 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease FLILHELTA PF10306.9 RKO86758.1 - 2e-12 47.3 0.0 3.7e-12 46.5 0.0 1.5 2 0 0 2 2 2 1 Hypothetical protein FLILHELTA DUF1279 PF06916.13 RKO86758.1 - 0.00022 21.7 0.1 0.00077 20.0 0.1 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF1279) EII-GUT PF03608.13 RKO86758.1 - 0.059 13.3 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 PTS system enzyme II sorbitol-specific factor Fcf1 PF04900.12 RKO86759.1 - 3.6e-39 133.2 3.2 7e-39 132.2 3.2 1.5 1 0 0 1 1 1 1 Fcf1 PIN_9 PF18477.1 RKO86759.1 - 2.8e-11 43.7 0.7 4.5e-11 43.1 0.0 1.6 2 0 0 2 2 2 1 PIN like domain DUF5024 PF16427.5 RKO86759.1 - 0.0052 17.1 0.9 0.011 16.1 0.9 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5024) DUF962 PF06127.11 RKO86760.1 - 0.0042 17.2 0.4 0.0049 16.9 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF962) Glyco_hydro_26 PF02156.15 RKO86762.1 - 0.0013 18.3 0.8 0.16 11.4 0.8 2.2 1 1 0 1 1 1 1 Glycosyl hydrolase family 26 RCS1 PF07326.11 RKO86763.1 - 0.00039 20.4 2.3 0.00053 20.0 2.3 1.2 1 0 0 1 1 1 1 Regulator of chromosome segregation 1 THOC7 PF05615.13 RKO86763.1 - 0.13 12.5 0.3 0.13 12.5 0.3 2.2 2 0 0 2 2 2 0 Tho complex subunit 7 DUF5089 PF17002.5 RKO86763.1 - 0.29 11.0 12.4 1.9 8.3 12.4 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF5089) Atrophin-1 PF03154.15 RKO86763.1 - 1.3 7.2 10.1 1.5 7.0 10.1 1.1 1 0 0 1 1 1 0 Atrophin-1 family MscS_TM PF12794.7 RKO86763.1 - 5.6 5.7 6.1 8.2 5.2 6.1 1.3 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Sof1 PF04158.14 RKO86767.1 - 1.7e-32 111.5 11.4 3.4e-32 110.6 11.4 1.5 1 0 0 1 1 1 1 Sof1-like domain WD40 PF00400.32 RKO86767.1 - 8.2e-16 58.1 2.4 3.7e-05 24.4 0.0 3.9 4 0 0 4 4 4 3 WD domain, G-beta repeat DHFR_2 PF06442.11 RKO86767.1 - 0.024 14.5 0.0 9 6.2 0.0 2.4 2 0 0 2 2 2 0 R67 dihydrofolate reductase DRIM PF07539.12 RKO86768.1 - 0.25 9.6 0.0 0.31 9.3 0.0 1.1 1 0 0 1 1 1 0 Down-regulated in metastasis BAH PF01426.18 RKO86769.1 - 5.9e-23 81.0 0.0 3.5e-17 62.4 0.1 2.7 2 1 0 2 2 2 2 BAH domain DNMT1-RFD PF12047.8 RKO86769.1 - 1.8e-14 54.0 0.0 3.7e-14 53.0 0.0 1.5 1 0 0 1 1 1 1 Cytosine specific DNA methyltransferase replication foci domain DNA_methylase PF00145.17 RKO86769.1 - 0.014 14.7 0.1 0.16 11.2 0.0 2.3 2 0 0 2 2 2 0 C-5 cytosine-specific DNA methylase Mog1 PF04603.12 RKO86771.1 - 9.2e-38 129.7 0.0 1.1e-37 129.4 0.0 1.1 1 0 0 1 1 1 1 Ran-interacting Mog1 protein YqgC PF17430.2 RKO86772.1 - 2 8.5 7.1 16 5.7 7.1 2.7 1 0 0 1 1 1 0 Uncharacterized YqgC-like DEAD PF00270.29 RKO86773.1 - 1.7e-43 148.4 0.3 2.5e-43 147.9 0.3 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO86773.1 - 1.4e-28 99.5 2.1 3.4e-28 98.2 0.4 2.3 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO86773.1 - 0.0025 17.8 0.0 0.0045 17.0 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 RKO86773.1 - 0.013 14.7 0.1 0.02 14.1 0.1 1.2 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase CMS1 PF14617.6 RKO86773.1 - 0.021 14.2 0.1 0.043 13.1 0.1 1.4 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit Phage_integrase PF00589.22 RKO86773.1 - 0.075 12.8 0.1 0.14 11.9 0.1 1.5 1 0 0 1 1 1 0 Phage integrase family Mur_ligase_M PF08245.12 RKO86774.1 - 5.2e-06 26.6 0.2 0.0014 18.7 0.2 3.0 1 1 0 1 1 1 1 Mur ligase middle domain MBOAT PF03062.19 RKO86775.1 - 8.9e-42 143.7 5.1 1.2e-41 143.2 5.1 1.2 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family HEAT_2 PF13646.6 RKO86778.1 - 0.00079 19.8 7.7 0.03 14.7 4.4 3.1 1 1 1 2 2 2 1 HEAT repeats Adaptin_N PF01602.20 RKO86778.1 - 0.0093 14.6 0.1 0.046 12.3 0.1 1.8 1 1 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 RKO86778.1 - 0.015 15.4 0.0 0.088 12.9 0.0 2.0 1 1 1 2 2 2 0 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 RKO86778.1 - 0.065 13.5 0.1 0.065 13.5 0.1 3.8 4 1 1 5 5 5 0 HEAT repeat HEAT_EZ PF13513.6 RKO86778.1 - 0.4 11.2 7.0 3.6 8.2 0.1 3.4 3 2 0 3 3 3 0 HEAT-like repeat GalKase_gal_bdg PF10509.9 RKO86779.1 - 3.6e-24 84.1 0.0 7.2e-24 83.1 0.0 1.5 1 0 0 1 1 1 1 Galactokinase galactose-binding signature OPT PF03169.15 RKO86780.1 - 1.7e-148 496.0 43.1 1.9e-148 495.9 43.1 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein PX PF00787.24 RKO86781.1 - 0.091 12.7 0.2 0.25 11.4 0.2 1.6 1 0 0 1 1 1 0 PX domain Corona_nucleoca PF00937.18 RKO86781.1 - 0.86 8.6 8.8 1.4 7.8 8.8 1.2 1 0 0 1 1 1 0 Coronavirus nucleocapsid protein DUF2722 PF10846.8 RKO86781.1 - 4.7 6.1 11.8 0.084 11.8 2.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2722) Nup84_Nup100 PF04121.13 RKO86782.1 - 1e-22 80.1 0.0 1.1e-22 80.0 0.0 1.0 1 0 0 1 1 1 1 Nuclear pore protein 84 / 107 CHCH PF06747.13 RKO86783.1 - 3.1e-08 33.5 4.2 4.1e-08 33.1 4.2 1.2 1 0 0 1 1 1 1 CHCH domain CX9C PF16860.5 RKO86783.1 - 0.042 13.8 1.9 0.063 13.3 1.9 1.2 1 0 0 1 1 1 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, Na_K-ATPase PF00287.18 RKO86783.1 - 0.15 11.2 0.5 0.19 10.9 0.5 1.1 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain DUF1631 PF07793.11 RKO86783.1 - 7.4 4.8 7.7 7.5 4.8 7.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) Vps16_N PF04841.13 RKO86786.1 - 1.5e-24 86.5 0.0 2e-24 86.2 0.0 1.1 1 0 0 1 1 1 1 Vps16, N-terminal region AAA_23 PF13476.6 RKO86787.1 - 5e-15 56.5 40.9 7.5e-11 42.9 29.5 3.7 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.6 RKO86787.1 - 1.7e-11 44.5 2.9 1.7e-11 44.5 2.9 3.0 2 1 0 2 2 2 1 AAA ATPase domain SMC_N PF02463.19 RKO86787.1 - 1.3e-10 41.1 0.1 1.3e-10 41.1 0.1 2.3 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 RKO86787.1 - 2.1e-07 30.6 0.1 4.3e-07 29.6 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 RKO86787.1 - 0.0034 17.2 0.8 0.0079 16.0 0.8 1.6 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 RKO86787.1 - 0.0094 16.5 0.3 0.0094 16.5 0.3 3.9 3 1 0 3 3 2 1 ABC transporter MukB PF04310.12 RKO86787.1 - 0.036 13.9 0.2 0.036 13.9 0.2 3.4 3 0 0 3 3 3 0 MukB N-terminal Ploopntkinase3 PF18751.1 RKO86787.1 - 0.057 13.3 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_27 PF13514.6 RKO86787.1 - 0.061 12.9 0.0 0.061 12.9 0.0 3.3 3 0 0 3 3 3 0 AAA domain AAA_13 PF13166.6 RKO86787.1 - 0.066 11.8 0.1 0.066 11.8 0.1 4.2 3 1 1 4 4 3 0 AAA domain KCNQ2_u3 PF16642.5 RKO86787.1 - 0.12 13.3 0.6 5.8 8.0 0.2 2.9 2 0 0 2 2 2 0 Unstructured region on Potassium channel subunit alpha KvLQT2 Spc7 PF08317.11 RKO86787.1 - 0.21 10.4 55.3 0.14 11.0 9.4 4.3 2 2 2 4 4 4 0 Spc7 kinetochore protein DUF948 PF06103.11 RKO86787.1 - 0.26 11.6 15.3 0.94 9.8 0.8 4.2 2 2 2 4 4 4 0 Bacterial protein of unknown function (DUF948) SHE3 PF17078.5 RKO86787.1 - 1.2 8.8 34.5 0.72 9.5 1.6 3.8 2 2 2 4 4 4 0 SWI5-dependent HO expression protein 3 DUF4407 PF14362.6 RKO86787.1 - 1.3 8.3 36.9 0.79 9.0 1.9 3.2 2 1 0 3 3 3 0 Domain of unknown function (DUF4407) CENP-F_leu_zip PF10473.9 RKO86787.1 - 2.5 8.1 52.0 0.75 9.8 12.1 4.9 2 2 2 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 PI_PP_I PF18363.1 RKO86787.1 - 5.3 7.3 7.1 1.3 9.2 0.0 3.3 4 0 0 4 4 4 0 Phosphoinositide phosphatase insertion domain Fez1 PF06818.15 RKO86788.1 - 4.9e-05 23.9 60.2 0.084 13.3 7.4 5.5 2 1 3 5 5 5 3 Fez1 Tropomyosin_1 PF12718.7 RKO86788.1 - 0.004 17.3 1.4 0.004 17.3 1.4 6.1 3 2 4 7 7 7 1 Tropomyosin like DUF1664 PF07889.12 RKO86788.1 - 0.1 12.6 23.1 2.3 8.3 0.1 5.5 4 1 0 5 5 5 0 Protein of unknown function (DUF1664) LPP PF04728.13 RKO86788.1 - 0.18 12.2 19.3 2.6 8.5 0.2 5.4 4 0 0 4 4 4 0 Lipoprotein leucine-zipper DUF4763 PF15960.5 RKO86788.1 - 1.3 8.3 24.3 0.71 9.1 6.5 3.5 1 1 2 3 3 3 0 Domain of unknown function (DUF4763) Mod_r PF07200.13 RKO86788.1 - 4.5 7.4 33.2 5.1 7.2 3.8 5.1 2 1 1 4 4 4 0 Modifier of rudimentary (Mod(r)) protein ERM PF00769.19 RKO86788.1 - 7 6.4 75.9 0.024 14.5 11.3 5.0 1 1 3 5 5 5 0 Ezrin/radixin/moesin family FlxA PF14282.6 RKO86788.1 - 7.2 6.7 16.0 4.9 7.2 0.4 5.0 4 1 0 5 5 5 0 FlxA-like protein CENP-F_leu_zip PF10473.9 RKO86788.1 - 8.7 6.4 55.4 1.7 8.7 10.9 5.8 3 1 2 5 5 5 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 E1-E2_ATPase PF00122.20 RKO86789.1 - 2.4e-37 128.2 6.0 4e-37 127.5 6.0 1.4 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 RKO86789.1 - 1.3e-19 71.4 0.0 5.5e-19 69.3 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 RKO86789.1 - 1.2e-17 63.8 0.0 2.2e-17 62.9 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 RKO86789.1 - 1.8e-05 24.3 0.0 9.3e-05 22.0 0.0 2.1 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 RKO86789.1 - 2.4e-05 24.2 0.1 0.00043 20.1 0.2 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Endonuclease_7 PF02945.15 RKO86790.1 - 2.9 7.9 7.2 1.9 8.4 4.8 2.0 2 1 0 2 2 2 0 Recombination endonuclease VII Snapin_Pallidin PF14712.6 RKO86793.1 - 0.0013 19.1 1.2 0.0032 17.9 1.2 1.6 1 0 0 1 1 1 1 Snapin/Pallidin HrpF PF06266.12 RKO86793.1 - 0.024 14.9 0.3 0.06 13.6 0.3 1.7 1 0 0 1 1 1 0 HrpF protein Laminin_II PF06009.12 RKO86793.1 - 0.13 12.2 1.6 0.28 11.2 1.6 1.5 1 0 0 1 1 1 0 Laminin Domain II SlyX PF04102.12 RKO86793.1 - 1.2 9.8 5.1 14 6.4 2.8 2.7 2 0 0 2 2 2 0 SlyX ABC_tran_CTD PF16326.5 RKO86793.1 - 4.8 7.5 7.5 6.9 7.0 0.6 2.6 2 0 0 2 2 2 0 ABC transporter C-terminal domain DUF3450 PF11932.8 RKO86793.1 - 4.8 6.4 8.8 0.41 9.9 3.6 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Helicase_C PF00271.31 RKO86795.1 - 1.7e-25 89.5 0.4 1.2e-24 86.8 0.0 2.6 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DEAD PF00270.29 RKO86795.1 - 9.4e-21 74.4 0.0 1.8e-20 73.5 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF4217 PF13959.6 RKO86795.1 - 2.5e-20 72.5 0.0 5.7e-20 71.3 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) PAS_11 PF14598.6 RKO86795.1 - 0.11 12.6 0.0 14 5.8 0.0 2.6 2 0 0 2 2 2 0 PAS domain Mito_carr PF00153.27 RKO86796.1 - 2.9e-41 139.3 3.3 1.1e-14 54.1 0.0 3.2 3 0 0 3 3 3 3 Mitochondrial carrier protein cNMP_binding PF00027.29 RKO86798.1 - 4e-06 26.8 0.1 7.8e-06 25.9 0.1 1.5 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain TFIIF_alpha PF05793.12 RKO86798.1 - 1.4 7.5 5.3 2.1 6.8 5.3 1.2 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) CBFD_NFYB_HMF PF00808.23 RKO86799.1 - 0.0018 18.5 0.0 0.11 12.7 0.0 2.2 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone REF PF05755.12 RKO86799.1 - 0.033 14.0 2.5 0.059 13.2 1.4 1.8 1 1 1 2 2 2 0 Rubber elongation factor protein (REF) DUF4126 PF13548.6 RKO86799.1 - 7 6.3 11.0 21 4.8 10.9 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4126) Perilipin PF03036.16 RKO86799.1 - 9.4 5.1 7.2 4.5 6.2 1.5 2.3 1 1 2 3 3 3 0 Perilipin family RhoGAP PF00620.27 RKO86803.1 - 6.3e-10 39.1 0.0 9.9e-10 38.4 0.0 1.2 1 0 0 1 1 1 1 RhoGAP domain peroxidase PF00141.23 RKO86804.1 - 1.7e-45 155.5 0.0 2.6e-45 154.9 0.0 1.2 1 0 0 1 1 1 1 Peroxidase Diedel PF13164.6 RKO86807.1 - 0.071 13.6 2.3 0.14 12.7 0.9 2.1 2 0 0 2 2 2 0 Diedel IGFBP PF00219.18 RKO86807.1 - 2.7 8.7 12.0 22 5.8 0.2 3.3 2 1 1 3 3 3 0 Insulin-like growth factor binding protein Glycos_transf_2 PF00535.26 RKO86812.1 - 0.0028 17.5 0.0 0.0077 16.1 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 RKO86812.1 - 0.14 12.1 0.0 0.14 12.1 0.0 2.2 2 0 0 2 2 2 0 Glycosyl transferase family group 2 Reeler PF02014.16 RKO86814.1 - 7.4e-10 39.7 0.0 1.1e-09 39.2 0.0 1.2 1 0 0 1 1 1 1 Reeler domain RgpF PF05045.12 RKO86816.1 - 4e-06 25.9 0.0 8.1e-05 21.6 0.0 2.0 1 1 0 1 1 1 1 Rhamnan synthesis protein F EGF_2 PF07974.13 RKO86817.1 - 0.0008 19.7 1.4 0.56 10.6 0.5 2.2 2 0 0 2 2 2 2 EGF-like domain Clathrin PF00637.20 RKO86818.1 - 4.9e-13 49.2 0.0 1.1e-12 48.0 0.0 1.5 1 0 0 1 1 1 1 Region in Clathrin and VPS DUF3712 PF12505.8 RKO86819.1 - 0.0038 17.5 0.1 0.0067 16.7 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3712) FPL PF09758.9 RKO86820.1 - 7.1e-33 113.7 0.7 2.2e-19 69.9 0.2 2.2 2 0 0 2 2 2 2 Uncharacterised conserved protein ORC6 PF05460.13 RKO86822.1 - 3.6 6.7 19.7 4.4 6.5 19.7 1.1 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) DUF4551 PF15087.6 RKO86822.1 - 8.2 5.1 9.9 8.5 5.1 9.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) BAR PF03114.18 RKO86824.1 - 1.2e-25 90.6 1.0 1.5e-25 90.3 1.0 1.0 1 0 0 1 1 1 1 BAR domain BAR_3 PF16746.5 RKO86824.1 - 0.015 15.0 0.4 0.019 14.7 0.4 1.1 1 0 0 1 1 1 0 BAR domain of APPL family BAR_2 PF10455.9 RKO86824.1 - 0.018 14.2 0.7 0.021 14.0 0.7 1.1 1 0 0 1 1 1 0 Bin/amphiphysin/Rvs domain for vesicular trafficking DUF3912 PF13051.6 RKO86824.1 - 0.098 12.9 0.1 0.15 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3912) CENP-H PF05837.12 RKO86825.1 - 0.015 15.7 5.2 0.015 15.7 5.2 4.7 5 0 0 5 5 5 0 Centromere protein H (CENP-H) Ribosomal_S4e PF00900.20 RKO86826.1 - 9.3e-29 99.2 0.0 1.7e-28 98.3 0.0 1.4 1 0 0 1 1 1 1 Ribosomal family S4e 40S_S4_C PF16121.5 RKO86826.1 - 2.2e-16 59.2 0.0 3.9e-16 58.4 0.0 1.4 1 0 0 1 1 1 1 40S ribosomal protein S4 C-terminus TALPID3 PF15324.6 RKO86829.1 - 0.18 9.5 1.5 0.22 9.2 1.5 1.1 1 0 0 1 1 1 0 Hedgehog signalling target Herpes_ori_bp PF02399.15 RKO86830.1 - 4.9e-16 58.0 0.0 8e-11 40.7 0.0 2.3 1 1 1 2 2 2 2 Origin of replication binding protein PriCT_2 PF08707.11 RKO86830.1 - 0.00022 21.5 1.3 0.00073 19.9 1.3 1.9 1 0 0 1 1 1 1 Primase C terminal 2 (PriCT-2) Glyco_transf_34 PF05637.12 RKO86830.1 - 0.019 14.7 0.3 0.062 13.0 0.3 1.9 1 0 0 1 1 1 0 galactosyl transferase GMA12/MNN10 family Usp PF00582.26 RKO86831.1 - 1.7e-11 44.8 1.0 2.5e-11 44.3 1.0 1.3 1 1 0 1 1 1 1 Universal stress protein family ETF PF01012.21 RKO86831.1 - 0.055 13.3 0.1 0.076 12.9 0.1 1.2 1 0 0 1 1 1 0 Electron transfer flavoprotein domain TRAM_LAG1_CLN8 PF03798.16 RKO86832.1 - 8e-35 120.4 13.4 8.9e-35 120.2 13.4 1.0 1 0 0 1 1 1 1 TLC domain F-box-like PF12937.7 RKO86833.1 - 0.05 13.5 0.1 0.3 11.0 0.1 2.3 2 0 0 2 2 2 0 F-box-like DUF4677 PF15726.5 RKO86836.1 - 0.082 13.1 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4677) Pkinase PF00069.25 RKO86839.1 - 0.0041 16.5 0.0 0.0052 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain SGT1 PF07093.11 RKO86840.1 - 2e-52 178.5 2.6 2.7e-52 178.0 2.6 1.2 1 0 0 1 1 1 1 SGT1 protein PT-VENN PF04829.13 RKO86840.1 - 0.17 12.0 0.0 0.36 10.9 0.0 1.5 1 0 0 1 1 1 0 Pre-toxin domain with VENN motif SGT1 PF07093.11 RKO86841.1 - 4.7e-33 114.5 0.0 5.2e-33 114.4 0.0 1.0 1 0 0 1 1 1 1 SGT1 protein ANAPC1 PF12859.7 RKO86841.1 - 0.15 12.6 0.1 0.24 12.0 0.0 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 1 EIID-AGA PF03613.14 RKO86842.1 - 0.24 10.5 0.0 0.33 10.1 0.0 1.1 1 0 0 1 1 1 0 PTS system mannose/fructose/sorbose family IID component Gly_transf_sug PF04488.15 RKO86844.1 - 2.7e-16 60.0 0.0 4.7e-16 59.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase sugar-binding region containing DXD motif TcdA_TcdB PF12919.7 RKO86844.1 - 0.065 12.5 3.4 0.14 11.4 0.9 2.1 1 1 0 2 2 2 0 TcdA/TcdB catalytic glycosyltransferase domain Caps_synth PF05704.12 RKO86844.1 - 0.1 12.0 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Capsular polysaccharide synthesis protein HSP70 PF00012.20 RKO86845.1 - 3e-143 478.2 0.4 4.3e-143 477.7 0.4 1.2 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 RKO86845.1 - 2.3e-10 39.8 0.1 1.8e-09 36.9 0.0 2.0 2 0 0 2 2 2 1 MreB/Mbl protein DnaB_bind PF10410.9 RKO86845.1 - 0.017 15.3 0.2 0.043 14.0 0.2 1.6 1 0 0 1 1 1 0 DnaB-helicase binding domain of primase Ketoacyl-synt_C PF02801.22 RKO86845.1 - 0.088 12.8 0.0 0.22 11.5 0.0 1.6 1 0 0 1 1 1 0 Beta-ketoacyl synthase, C-terminal domain Histone PF00125.24 RKO86846.1 - 2.8e-10 40.7 0.0 3.3e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Ycf15 PF10705.9 RKO86846.1 - 0.19 11.9 0.1 0.28 11.3 0.1 1.2 1 0 0 1 1 1 0 Chloroplast protein precursor Ycf15 putative peroxidase PF00141.23 RKO86847.1 - 1.2e-12 48.0 0.1 2.9e-12 46.8 0.1 1.6 1 0 0 1 1 1 1 Peroxidase SelP_N PF04592.14 RKO86847.1 - 0.038 13.4 13.3 0.069 12.5 13.3 1.3 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Peptidase_A8 PF01252.18 RKO86847.1 - 0.042 14.1 0.1 0.089 13.0 0.1 1.4 1 0 0 1 1 1 0 Signal peptidase (SPase) II Dicty_REP PF05086.12 RKO86847.1 - 0.57 8.1 10.9 0.84 7.5 10.9 1.1 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Mucin PF01456.17 RKO86847.1 - 1.7 8.6 35.1 4.7 7.2 35.1 1.7 1 0 0 1 1 1 0 Mucin-like glycoprotein Glyco_hydro_18 PF00704.28 RKO86848.1 - 2e-38 132.9 0.0 2.3e-38 132.7 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 Caerin_1 PF07440.12 RKO86849.1 - 0.053 13.6 0.7 0.28 11.3 0.1 2.1 2 0 0 2 2 2 0 Caerin 1 protein Cation_ATPase_C PF00689.21 RKO86851.1 - 4.3e-24 85.2 0.1 7.7e-24 84.4 0.1 1.4 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 RKO86851.1 - 2.7e-16 60.5 0.1 5.9e-16 59.4 0.1 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 RKO86851.1 - 1.1e-05 25.3 0.1 8.8e-05 22.4 0.2 1.9 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Nucleoporin_C PF03177.14 RKO86852.1 - 1.2e-08 34.2 7.9 8e-07 28.2 4.7 3.7 2 1 0 2 2 2 1 Non-repetitive/WGA-negative nucleoporin C-terminal AA_permease PF00324.21 RKO86855.1 - 2.1e-37 128.9 8.7 1.5e-24 86.4 0.4 2.0 1 1 1 2 2 2 2 Amino acid permease AA_permease_2 PF13520.6 RKO86855.1 - 8.7e-09 34.7 5.0 1e-08 34.4 5.0 1.2 1 0 0 1 1 1 1 Amino acid permease ABC_tran PF00005.27 RKO86856.1 - 6.5e-26 91.5 0.0 8.3e-26 91.1 0.0 1.1 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 RKO86856.1 - 4.7e-05 23.4 0.2 7.5e-05 22.7 0.2 1.4 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 RKO86856.1 - 0.00011 22.2 0.2 0.00014 21.9 0.2 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_13 PF13166.6 RKO86856.1 - 0.00037 19.3 0.1 0.0028 16.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 RKO86856.1 - 0.0089 16.6 0.5 0.013 16.0 0.5 1.5 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 RKO86856.1 - 0.011 15.5 0.3 0.021 14.6 0.3 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 RKO86856.1 - 0.011 15.3 0.4 0.027 14.0 0.1 1.9 2 1 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 RKO86856.1 - 0.02 15.0 0.0 0.033 14.2 0.0 1.6 2 0 0 2 2 2 0 Dynamin family AAA_16 PF13191.6 RKO86856.1 - 0.022 15.2 0.2 0.027 14.9 0.2 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_24 PF13479.6 RKO86856.1 - 0.056 13.2 0.0 0.074 12.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 RKO86856.1 - 0.068 13.5 0.0 0.12 12.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 RKO86856.1 - 0.1 12.9 0.3 0.19 11.9 0.3 1.5 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 RKO86856.1 - 0.11 12.3 3.4 2.1 8.1 0.4 2.3 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_33 PF13671.6 RKO86856.1 - 0.13 12.4 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain Septin PF00735.18 RKO86856.1 - 0.14 11.4 0.0 0.19 11.0 0.0 1.2 1 0 0 1 1 1 0 Septin AAA_18 PF13238.6 RKO86856.1 - 0.16 12.5 0.0 0.25 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 RKO86856.1 - 0.34 11.0 1.7 0.72 9.9 0.3 2.0 2 1 0 2 2 2 0 Helicase HerA, central domain Sulfate_transp PF00916.20 RKO86857.1 - 4e-92 308.9 13.6 8.7e-92 307.8 13.6 1.5 1 1 0 1 1 1 1 Sulfate permease family MFS_MOT1 PF16983.5 RKO86857.1 - 1.7e-06 28.4 4.2 1.7e-06 28.4 4.2 3.2 3 0 0 3 3 3 2 Molybdate transporter of MFS superfamily STAS PF01740.21 RKO86857.1 - 1.9e-06 27.5 0.0 4.7e-06 26.2 0.0 1.6 1 0 0 1 1 1 1 STAS domain E1-E2_ATPase PF00122.20 RKO86857.1 - 0.66 9.5 5.3 11 5.5 1.0 3.4 3 0 0 3 3 3 0 E1-E2 ATPase Biotin_lipoyl PF00364.22 RKO86858.1 - 1e-14 54.1 2.5 1.1e-14 54.0 2.5 1.0 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 RKO86858.1 - 0.00029 20.6 0.7 0.0077 16.0 0.3 2.0 1 1 1 2 2 2 1 Biotin-lipoyl like HlyD_3 PF13437.6 RKO86858.1 - 0.0004 21.0 0.0 0.00045 20.9 0.0 1.1 1 0 0 1 1 1 1 HlyD family secretion protein HlyD_D23 PF16576.5 RKO86858.1 - 0.017 14.4 0.1 0.058 12.6 0.1 1.7 1 1 1 2 2 2 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCV_H PF01597.19 RKO86858.1 - 0.07 13.0 0.2 0.077 12.9 0.2 1.1 1 0 0 1 1 1 0 Glycine cleavage H-protein KA1 PF02149.19 RKO86859.1 - 2.1e-19 69.0 0.0 3e-19 68.5 0.0 1.3 1 0 0 1 1 1 1 Kinase associated domain 1 RNA_pol_L PF01193.24 RKO86859.1 - 0.13 11.7 0.1 0.25 10.8 0.1 1.4 1 0 0 1 1 1 0 RNA polymerase Rpb3/Rpb11 dimerisation domain Pkinase PF00069.25 RKO86860.1 - 1.2e-76 257.6 0.0 1.4e-76 257.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO86860.1 - 1.1e-44 152.7 0.0 1.3e-44 152.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO86860.1 - 1e-07 31.6 0.0 2.4e-07 30.4 0.0 1.6 1 1 1 2 2 2 1 Kinase-like Kdo PF06293.14 RKO86860.1 - 0.0012 18.2 0.9 0.0023 17.3 0.9 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 RKO86860.1 - 0.0015 18.1 0.2 0.0024 17.5 0.2 1.2 1 0 0 1 1 1 1 RIO1 family Haspin_kinase PF12330.8 RKO86860.1 - 0.0016 17.5 0.0 0.002 17.1 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 RKO86860.1 - 0.18 11.7 0.4 5.2 6.9 0.2 2.1 1 1 1 2 2 2 0 Phosphotransferase enzyme family RdRP PF05183.12 RKO86863.1 - 2.3e-41 142.2 0.0 2.9e-41 141.8 0.0 1.1 1 0 0 1 1 1 1 RNA dependent RNA polymerase RRM_1 PF00076.22 RKO86863.1 - 0.0029 17.4 0.0 0.006 16.4 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) F-box-like PF12937.7 RKO86864.1 - 0.0027 17.6 0.1 0.007 16.2 0.1 1.7 1 0 0 1 1 1 1 F-box-like Adeno_IVa2 PF02456.15 RKO86865.1 - 0.15 10.8 0.0 0.2 10.4 0.0 1.1 1 0 0 1 1 1 0 Adenovirus IVa2 protein CDC45 PF02724.14 RKO86866.1 - 0.17 10.1 0.0 0.26 9.5 0.0 1.1 1 0 0 1 1 1 0 CDC45-like protein Pkinase PF00069.25 RKO86867.1 - 7.2e-07 28.8 0.0 1.3e-06 28.0 0.0 1.4 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.23 RKO86867.1 - 0.00069 19.6 0.1 0.0037 17.2 0.1 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 RKO86867.1 - 0.17 11.5 0.0 0.26 10.8 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase Pkinase_fungal PF17667.1 RKO86867.1 - 0.24 10.1 0.0 0.24 10.1 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase DUF641 PF04859.12 RKO86869.1 - 1.5 9.1 3.7 4.2 7.7 3.8 1.6 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Phage_T7_tail PF03906.14 RKO86872.1 - 2e-05 24.3 3.5 0.91 9.2 0.1 4.0 4 0 0 4 4 4 3 Phage T7 tail fibre protein DUF4431 PF14485.6 RKO86872.1 - 0.0032 17.2 0.9 5.2 6.9 0.0 3.7 4 0 0 4 4 4 2 Domain of unknown function (DUF4431) Helicase_C PF00271.31 RKO86873.1 - 0.038 14.3 0.0 0.1 13.0 0.0 1.7 2 0 0 2 2 2 0 Helicase conserved C-terminal domain Cyclin_C PF02984.19 RKO86874.1 - 0.11 12.6 0.1 0.65 10.1 0.0 2.0 2 0 0 2 2 2 0 Cyclin, C-terminal domain Peripla_BP_4 PF13407.6 RKO86878.1 - 1.5e-10 41.1 0.8 8.7e-09 35.3 2.6 2.1 2 0 0 2 2 2 1 Periplasmic binding protein domain 7tm_3 PF00003.22 RKO86878.1 - 1.6e-06 28.0 4.5 2.1e-06 27.6 1.3 2.1 2 0 0 2 2 2 1 7 transmembrane sweet-taste receptor of 3 GCPR Ephrin_rec_like PF07699.13 RKO86878.1 - 0.00088 19.0 2.2 0.00088 19.0 2.2 2.8 3 0 0 3 3 3 1 Putative ephrin-receptor like Peripla_BP_1 PF00532.21 RKO86878.1 - 0.011 15.1 0.1 0.022 14.2 0.1 1.5 1 1 0 1 1 1 0 Periplasmic binding proteins and sugar binding domain of LacI family AAA PF00004.29 RKO86879.1 - 3.5e-43 147.2 0.0 8.3e-43 146.0 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 RKO86879.1 - 2.2e-12 46.6 0.0 5e-12 45.4 0.0 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 RKO86879.1 - 3.8e-07 30.4 0.0 1e-06 29.0 0.0 1.7 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) Prot_ATP_ID_OB PF16450.5 RKO86879.1 - 5.7e-07 29.4 0.5 1.4e-06 28.1 0.5 1.7 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_5 PF07728.14 RKO86879.1 - 8.6e-07 29.0 0.0 6.9e-06 26.1 0.0 2.5 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 RKO86879.1 - 3.4e-06 27.6 0.2 7.3e-05 23.2 0.0 2.8 3 1 1 4 4 2 1 AAA ATPase domain AAA_22 PF13401.6 RKO86879.1 - 4.4e-05 23.8 0.4 0.0081 16.4 0.0 2.7 2 1 1 3 3 2 1 AAA domain RuvB_N PF05496.12 RKO86879.1 - 9.9e-05 22.1 0.0 0.00021 21.1 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain DUF4618 PF15397.6 RKO86879.1 - 0.00072 19.1 1.5 0.0019 17.7 1.5 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4618) AAA_18 PF13238.6 RKO86879.1 - 0.00075 20.0 0.1 0.022 15.3 0.0 2.9 3 0 0 3 3 3 1 AAA domain TIP49 PF06068.13 RKO86879.1 - 0.0012 18.1 0.0 0.0028 16.9 0.0 1.6 1 1 0 1 1 1 1 TIP49 P-loop domain AAA_33 PF13671.6 RKO86879.1 - 0.0014 18.8 0.0 0.0032 17.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 RKO86879.1 - 0.0022 17.8 0.0 0.0051 16.6 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein DUF2072 PF09845.9 RKO86879.1 - 0.0025 18.1 0.6 0.0056 16.9 0.6 1.5 1 0 0 1 1 1 1 Zn-ribbon containing protein Mg_chelatase PF01078.21 RKO86879.1 - 0.0048 16.3 0.1 0.018 14.5 0.1 1.8 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_13 PF13166.6 RKO86879.1 - 0.0061 15.3 0.4 0.26 9.9 0.4 2.1 2 0 0 2 2 2 1 AAA domain AAA_3 PF07726.11 RKO86879.1 - 0.0063 16.4 0.0 0.017 15.0 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Prominin PF05478.11 RKO86879.1 - 0.0068 14.4 0.3 0.011 13.8 0.3 1.2 1 0 0 1 1 1 1 Prominin PhoH PF02562.16 RKO86879.1 - 0.0071 15.8 0.0 0.13 11.7 0.0 2.4 2 0 0 2 2 2 1 PhoH-like protein APG6_N PF17675.1 RKO86879.1 - 0.0087 16.6 3.5 0.019 15.5 3.5 1.5 1 0 0 1 1 1 1 Apg6 coiled-coil region AAA_28 PF13521.6 RKO86879.1 - 0.0099 16.1 0.2 0.02 15.1 0.0 1.6 2 0 0 2 2 1 1 AAA domain Spc7 PF08317.11 RKO86879.1 - 0.015 14.2 1.7 0.041 12.8 1.7 1.7 1 0 0 1 1 1 0 Spc7 kinetochore protein AAA_24 PF13479.6 RKO86879.1 - 0.016 14.9 0.1 0.069 12.9 0.1 2.1 1 1 0 1 1 1 0 AAA domain ATPase PF06745.13 RKO86879.1 - 0.019 14.4 0.1 0.064 12.6 0.0 1.9 1 1 1 2 2 2 0 KaiC TsaE PF02367.17 RKO86879.1 - 0.021 14.8 0.0 0.041 13.9 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_11 PF13086.6 RKO86879.1 - 0.023 14.5 0.4 0.43 10.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 RKO86879.1 - 0.023 14.4 0.0 0.11 12.2 0.0 2.1 3 0 0 3 3 2 0 Sigma-54 interaction domain DUF815 PF05673.13 RKO86879.1 - 0.034 13.3 0.1 0.094 11.9 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_7 PF12775.7 RKO86879.1 - 0.038 13.5 0.0 0.071 12.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_14 PF13173.6 RKO86879.1 - 0.039 14.0 0.0 0.077 13.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 RKO86879.1 - 0.043 14.2 0.0 0.085 13.2 0.0 1.5 1 0 0 1 1 1 0 RNA helicase TMF_TATA_bd PF12325.8 RKO86879.1 - 0.047 13.9 3.9 0.045 14.0 1.7 2.1 2 0 0 2 2 1 0 TATA element modulatory factor 1 TATA binding AAA_17 PF13207.6 RKO86879.1 - 0.055 13.9 0.3 0.84 10.1 0.0 2.8 3 0 0 3 3 3 0 AAA domain AAA_25 PF13481.6 RKO86879.1 - 0.057 13.0 0.0 0.17 11.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain Parvo_NS1 PF01057.17 RKO86879.1 - 0.059 12.5 0.0 0.1 11.7 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Zeta_toxin PF06414.12 RKO86879.1 - 0.072 12.4 0.0 0.19 11.0 0.0 1.8 1 0 0 1 1 1 0 Zeta toxin ATG16 PF08614.11 RKO86879.1 - 0.073 13.3 4.9 0.13 12.5 4.9 1.3 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) AAA_19 PF13245.6 RKO86879.1 - 0.075 13.4 0.1 0.51 10.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain MscS_porin PF12795.7 RKO86879.1 - 0.077 12.5 8.6 0.13 11.8 8.6 1.2 1 0 0 1 1 1 0 Mechanosensitive ion channel porin domain CENP-F_leu_zip PF10473.9 RKO86879.1 - 0.077 13.0 4.8 0.19 11.7 4.8 1.6 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 V-SNARE PF05008.15 RKO86879.1 - 0.078 13.4 4.0 0.24 11.8 4.0 1.8 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus Spc24 PF08286.11 RKO86879.1 - 0.094 13.0 0.7 0.26 11.6 0.7 1.7 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 DUF3450 PF11932.8 RKO86879.1 - 0.12 11.7 2.9 0.27 10.5 2.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Tropomyosin PF00261.20 RKO86879.1 - 0.17 11.2 7.2 0.11 11.8 2.8 2.1 2 0 0 2 2 2 0 Tropomyosin SlyX PF04102.12 RKO86879.1 - 0.24 12.0 3.6 0.97 10.1 3.6 2.0 1 0 0 1 1 1 0 SlyX Prefoldin_2 PF01920.20 RKO86879.1 - 0.82 9.7 6.1 0.59 10.1 3.9 1.9 2 0 0 2 2 1 0 Prefoldin subunit RILP PF11461.8 RKO86879.1 - 1.1 9.6 6.8 1.3 9.3 5.6 1.7 1 1 0 1 1 1 0 Rab interacting lysosomal protein ADIP PF11559.8 RKO86879.1 - 1.5 8.9 8.4 0.16 12.0 3.5 1.8 2 0 0 2 2 1 0 Afadin- and alpha -actinin-Binding DivIC PF04977.15 RKO86879.1 - 2.8 7.8 5.5 6.6 6.6 5.5 1.6 1 0 0 1 1 1 0 Septum formation initiator KASH_CCD PF14662.6 RKO86882.1 - 0.00066 19.6 5.2 0.017 15.0 0.1 2.1 2 0 0 2 2 2 1 Coiled-coil region of CCDC155 or KASH bZIP_2 PF07716.15 RKO86882.1 - 0.0017 18.4 10.1 0.14 12.3 0.1 3.5 3 0 0 3 3 3 2 Basic region leucine zipper Nnf1 PF03980.14 RKO86882.1 - 0.0033 17.8 0.2 0.0033 17.8 0.2 2.2 2 1 0 2 2 2 1 Nnf1 BicD PF09730.9 RKO86882.1 - 0.024 13.1 0.5 0.024 13.1 0.5 1.6 2 0 0 2 2 2 0 Microtubule-associated protein Bicaudal-D APG6_N PF17675.1 RKO86882.1 - 0.036 14.6 5.4 0.11 13.0 0.1 2.2 2 0 0 2 2 2 0 Apg6 coiled-coil region ADIP PF11559.8 RKO86882.1 - 0.038 14.1 6.4 0.86 9.7 0.4 2.2 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding TMF_TATA_bd PF12325.8 RKO86882.1 - 0.053 13.8 9.1 0.072 13.3 2.5 2.8 2 1 0 2 2 2 0 TATA element modulatory factor 1 TATA binding CENP-F_leu_zip PF10473.9 RKO86882.1 - 0.06 13.4 0.5 0.06 13.4 0.5 2.2 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DivIC PF04977.15 RKO86882.1 - 0.22 11.3 10.8 2 8.2 0.7 3.1 2 1 1 3 3 3 0 Septum formation initiator IFP_35_N PF07334.13 RKO86882.1 - 0.63 10.2 5.7 6.6 6.9 0.1 3.2 3 0 0 3 3 3 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus TEX13 PF15186.6 RKO86882.1 - 0.92 9.2 4.5 3.4 7.3 0.3 2.3 2 0 0 2 2 2 0 Testis-expressed sequence 13 protein family GBR2_CC PF18455.1 RKO86882.1 - 0.95 9.6 5.0 4.1 7.6 0.5 3.5 4 0 0 4 4 4 0 Gamma-aminobutyric acid type B receptor subunit 2 coiled-coil domain ZapB PF06005.12 RKO86882.1 - 1.3 9.5 15.2 5.9 7.4 4.3 3.1 2 1 1 3 3 3 0 Cell division protein ZapB Striatin PF08232.12 RKO86882.1 - 2 9.0 5.8 1.4 9.5 0.5 2.2 2 0 0 2 2 2 0 Striatin family TSC22 PF01166.18 RKO86882.1 - 2.3 8.6 5.4 11 6.5 0.2 2.9 2 1 0 2 2 2 0 TSC-22/dip/bun family TMF_DNA_bd PF12329.8 RKO86882.1 - 8.1 6.5 11.9 6.7 6.8 0.4 2.4 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF2256 PF10013.9 RKO86883.1 - 0.043 13.9 0.4 0.043 13.9 0.4 2.0 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) zf-C2H2_jaz PF12171.8 RKO86883.1 - 0.08 13.3 3.5 0.18 12.1 0.5 2.4 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 RKO86883.1 - 0.1 13.1 13.5 0.12 12.9 1.0 2.7 3 0 0 3 3 3 0 Zinc finger, C2H2 type zf-UBP PF02148.19 RKO86883.1 - 0.14 12.5 4.0 0.13 12.6 1.7 1.8 1 1 1 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein SDA1 PF05285.12 RKO86887.1 - 0.099 12.0 3.4 0.14 11.6 3.4 1.1 1 0 0 1 1 1 0 SDA1 Coq4 PF05019.13 RKO86889.1 - 9.3e-87 290.0 0.0 1.2e-86 289.6 0.0 1.0 1 0 0 1 1 1 1 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 SCO1-SenC PF02630.14 RKO86890.1 - 2.5e-46 156.9 0.0 3.3e-46 156.5 0.0 1.1 1 0 0 1 1 1 1 SCO1/SenC AhpC-TSA PF00578.21 RKO86890.1 - 1e-06 28.6 0.0 3.2e-06 27.1 0.0 1.8 1 1 0 1 1 1 1 AhpC/TSA family Thioredoxin_8 PF13905.6 RKO86890.1 - 5.6e-05 23.4 0.0 8.7e-05 22.8 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 RKO86890.1 - 0.0092 15.7 0.0 0.04 13.6 0.0 2.0 1 1 0 1 1 1 1 Redoxin PGAP1 PF07819.13 RKO86890.1 - 0.16 11.7 0.0 0.24 11.1 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein zf-CCHH PF10283.9 RKO86891.1 - 0.081 12.9 0.4 0.13 12.3 0.4 1.3 1 0 0 1 1 1 0 PBZ domain DUF4246 PF14033.6 RKO86892.1 - 5.7e-16 58.7 0.3 1.6e-06 27.5 0.1 3.4 2 2 1 3 3 3 3 Protein of unknown function (DUF4246) CBP_BcsS PF17036.5 RKO86892.1 - 0.19 11.7 0.0 0.53 10.2 0.0 1.7 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsS 2OG-FeII_Oxy_2 PF13532.6 RKO86893.1 - 9e-20 71.7 0.0 1.3e-18 67.9 0.0 2.0 1 1 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy PF03171.20 RKO86893.1 - 0.033 14.7 0.0 0.1 13.1 0.0 1.8 2 0 0 2 2 2 0 2OG-Fe(II) oxygenase superfamily Peptidase_M36 PF02128.15 RKO86894.1 - 2.4e-71 240.8 2.0 2.8e-71 240.6 2.0 1.0 1 0 0 1 1 1 1 Fungalysin metallopeptidase (M36) DUF1206 PF06724.11 RKO86895.1 - 0.012 15.7 1.3 0.014 15.4 1.3 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1206) DUF2545 PF10810.8 RKO86895.1 - 0.056 13.6 1.1 0.077 13.1 1.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2545) DUF1206 PF06724.11 RKO86896.1 - 3.4e-11 43.1 0.8 4.5e-11 42.7 0.8 1.2 1 0 0 1 1 1 1 Domain of Unknown Function (DUF1206) Profilin PF00235.19 RKO86897.1 - 2.2e-23 82.9 0.2 2.4e-23 82.8 0.2 1.0 1 0 0 1 1 1 1 Profilin DUF4354 PF14263.6 RKO86897.1 - 0.0088 15.9 0.2 0.014 15.2 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4354) PH PF00169.29 RKO86898.1 - 0.0014 19.1 0.0 0.0025 18.3 0.0 1.5 1 1 0 1 1 1 1 PH domain PH_4 PF15404.6 RKO86898.1 - 0.017 14.9 0.0 0.021 14.7 0.0 1.1 1 0 0 1 1 1 0 Pleckstrin homology domain PH_9 PF15410.6 RKO86898.1 - 0.019 15.3 0.0 0.024 15.0 0.0 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain PH_6 PF15406.6 RKO86898.1 - 0.069 13.4 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Pleckstrin homology domain HHV-5_US34A PF17087.5 RKO86899.1 - 0.041 14.0 0.2 0.37 11.0 0.0 2.0 2 0 0 2 2 2 0 Herpesvirus US34A protein family Kelch_4 PF13418.6 RKO86901.1 - 6.4e-08 32.5 8.9 0.23 11.5 0.0 5.1 6 0 0 6 6 6 3 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO86901.1 - 2.1e-06 27.6 0.9 0.16 12.0 0.0 3.3 3 0 0 3 3 3 2 Kelch motif Kelch_6 PF13964.6 RKO86901.1 - 0.00014 22.0 0.4 0.042 14.1 0.0 4.0 5 0 0 5 5 5 1 Kelch motif Kelch_3 PF13415.6 RKO86901.1 - 0.013 15.8 0.3 0.013 15.8 0.3 5.4 6 1 0 6 6 6 0 Galactose oxidase, central domain FXR_C1 PF16096.5 RKO86901.1 - 0.075 13.2 0.1 0.19 11.9 0.1 1.6 1 0 0 1 1 1 0 Fragile X-related 1 protein C-terminal region 2 Pox_A11 PF05061.13 RKO86903.1 - 0.0059 15.9 0.0 0.0087 15.4 0.0 1.1 1 0 0 1 1 1 1 Poxvirus A11 Protein DivIC PF04977.15 RKO86903.1 - 0.017 14.9 0.2 0.03 14.1 0.2 1.4 1 0 0 1 1 1 0 Septum formation initiator DUF4589 PF15252.6 RKO86905.1 - 0.033 14.2 0.5 0.06 13.3 0.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4589) WAP PF00095.21 RKO86906.1 - 0.026 14.9 2.2 0.047 14.1 2.2 1.4 1 0 0 1 1 1 0 WAP-type (Whey Acidic Protein) 'four-disulfide core' IPK PF03770.16 RKO86907.1 - 7.3e-43 146.7 0.0 8.5e-43 146.5 0.0 1.0 1 0 0 1 1 1 1 Inositol polyphosphate kinase 23ISL PF16620.5 RKO86911.1 - 0.17 12.1 9.2 0.29 11.3 9.2 1.4 1 0 0 1 1 1 0 Unstructured linker between I-set domains 2 and 3 on MYLCK Ribosomal_L21p PF00829.21 RKO86912.1 - 5.7e-12 45.8 0.1 6.8e-12 45.5 0.1 1.0 1 0 0 1 1 1 1 Ribosomal prokaryotic L21 protein Ribosomal_L2_C PF03947.18 RKO86913.1 - 1.9e-45 154.2 4.4 3.2e-45 153.4 4.4 1.4 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 RKO86913.1 - 1.4e-19 69.8 0.0 3e-19 68.8 0.0 1.6 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain DUF4620 PF15399.6 RKO86915.1 - 0.089 13.1 0.1 0.17 12.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4620) GATA PF00320.27 RKO86918.1 - 8.3e-07 28.5 1.8 1.4e-06 27.8 1.8 1.4 1 0 0 1 1 1 1 GATA zinc finger TagA PF12561.8 RKO86918.1 - 0.12 12.8 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 ToxR activated gene A lipoprotein domain EF-hand_6 PF13405.6 RKO86919.1 - 0.1 12.6 0.1 0.39 10.8 0.1 1.9 1 0 0 1 1 1 0 EF-hand domain RRM_1 PF00076.22 RKO86920.1 - 4.2e-05 23.3 0.0 8.3e-05 22.3 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) THOC7 PF05615.13 RKO86920.1 - 0.5 10.6 3.8 1.3 9.3 3.8 1.6 1 0 0 1 1 1 0 Tho complex subunit 7 ABC_tran PF00005.27 RKO86921.1 - 1.5e-36 125.9 0.0 6.3e-22 78.6 0.0 2.7 3 0 0 3 3 2 2 ABC transporter ABC_tran_Xtn PF12848.7 RKO86921.1 - 2.4e-22 78.8 2.9 2.4e-22 78.8 2.9 2.0 2 0 0 2 2 1 1 ABC transporter AAA_21 PF13304.6 RKO86921.1 - 2.2e-13 50.7 0.5 0.0011 18.9 0.0 3.3 3 0 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 RKO86921.1 - 6.1e-10 38.9 1.8 0.053 12.9 0.0 3.8 4 0 0 4 4 4 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 RKO86921.1 - 1.5e-08 34.3 0.1 0.0068 16.1 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 RKO86921.1 - 9.9e-08 32.1 1.6 0.001 19.0 0.0 3.2 3 0 0 3 3 3 2 RsgA GTPase AAA_23 PF13476.6 RKO86921.1 - 1.1e-07 32.6 8.1 0.023 15.2 0.0 3.5 4 0 0 4 4 3 2 AAA domain AAA_33 PF13671.6 RKO86921.1 - 4.9e-07 30.0 0.0 0.011 15.9 0.0 2.7 3 0 0 3 3 2 2 AAA domain AAA_16 PF13191.6 RKO86921.1 - 7.4e-07 29.7 0.0 0.022 15.2 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 RKO86921.1 - 2.4e-06 27.9 0.1 0.096 13.0 0.0 2.9 3 1 0 3 3 2 2 AAA domain MMR_HSR1 PF01926.23 RKO86921.1 - 4.5e-06 26.7 0.1 0.034 14.2 0.1 2.8 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_15 PF13175.6 RKO86921.1 - 1.4e-05 25.0 4.5 0.083 12.6 1.7 3.0 2 1 0 2 2 2 2 AAA ATPase domain AAA_18 PF13238.6 RKO86921.1 - 1.6e-05 25.5 0.0 0.28 11.7 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_24 PF13479.6 RKO86921.1 - 1.6e-05 24.7 0.2 0.22 11.2 0.0 2.7 3 0 0 3 3 3 2 AAA domain AAA_28 PF13521.6 RKO86921.1 - 2e-05 24.9 0.2 0.15 12.3 0.0 2.6 2 1 0 2 2 2 2 AAA domain AAA PF00004.29 RKO86921.1 - 2.1e-05 24.9 0.0 0.11 12.9 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 RKO86921.1 - 3.4e-05 23.9 0.0 0.073 13.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 RKO86921.1 - 4.2e-05 23.2 0.0 0.089 12.4 0.0 2.7 2 1 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 RKO86921.1 - 5.1e-05 23.6 1.1 0.71 10.3 0.0 3.2 3 0 0 3 3 3 2 RNA helicase NACHT PF05729.12 RKO86921.1 - 9.1e-05 22.4 0.0 0.27 11.1 0.0 2.7 2 0 0 2 2 2 2 NACHT domain AAA_14 PF13173.6 RKO86921.1 - 0.0001 22.3 0.1 0.27 11.3 0.0 3.3 3 1 1 4 4 3 1 AAA domain AAA_27 PF13514.6 RKO86921.1 - 0.00011 21.9 0.0 0.29 10.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain Dynamin_N PF00350.23 RKO86921.1 - 0.0002 21.5 2.8 3.2 7.8 0.1 3.9 4 0 0 4 4 4 1 Dynamin family Cytidylate_kin PF02224.18 RKO86921.1 - 0.00071 19.4 0.1 0.29 10.9 0.0 2.5 2 0 0 2 2 2 1 Cytidylate kinase T2SSE PF00437.20 RKO86921.1 - 0.001 18.2 0.0 0.31 10.0 0.0 2.4 2 0 0 2 2 2 1 Type II/IV secretion system protein Rad17 PF03215.15 RKO86921.1 - 0.0019 18.1 0.1 0.96 9.3 0.0 3.0 3 0 0 3 3 3 1 Rad17 P-loop domain ATP_bind_1 PF03029.17 RKO86921.1 - 0.0023 17.7 0.4 0.57 9.9 0.0 2.6 3 0 0 3 3 2 1 Conserved hypothetical ATP binding protein AAA_30 PF13604.6 RKO86921.1 - 0.0026 17.5 0.0 1.2 8.8 0.0 2.5 2 0 0 2 2 2 1 AAA domain TsaE PF02367.17 RKO86921.1 - 0.0029 17.6 0.1 1.6 8.7 0.0 3.0 2 1 1 3 3 3 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 RKO86921.1 - 0.0031 17.1 0.3 5.4 6.6 0.0 3.0 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain G-alpha PF00503.20 RKO86921.1 - 0.0037 16.5 0.4 4.5 6.3 0.0 2.8 2 1 0 3 3 3 0 G-protein alpha subunit MutS_V PF00488.21 RKO86921.1 - 0.0064 16.5 0.4 1.5 8.8 0.0 2.8 3 0 0 3 3 2 1 MutS domain V AAA_7 PF12775.7 RKO86921.1 - 0.0074 15.8 0.1 2.5 7.6 0.0 2.6 3 0 0 3 3 2 1 P-loop containing dynein motor region DUF87 PF01935.17 RKO86921.1 - 0.0094 16.1 1.1 4.4 7.3 0.1 2.9 3 0 0 3 3 3 0 Helicase HerA, central domain Arf PF00025.21 RKO86921.1 - 0.0094 15.4 0.0 0.1 12.0 0.0 2.6 3 0 0 3 3 2 1 ADP-ribosylation factor family VirE PF05272.11 RKO86921.1 - 0.01 15.6 0.1 2.9 7.6 0.0 2.9 3 0 0 3 3 3 0 Virulence-associated protein E Roc PF08477.13 RKO86921.1 - 0.018 15.3 0.0 3.1 8.1 0.0 2.6 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_17 PF13207.6 RKO86921.1 - 0.019 15.4 0.2 7.5 7.0 0.0 2.8 2 1 0 2 2 2 0 AAA domain SRP54 PF00448.22 RKO86921.1 - 0.02 14.5 0.0 6.2 6.4 0.1 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain IstB_IS21 PF01695.17 RKO86921.1 - 0.026 14.3 0.0 0.95 9.2 0.0 2.4 2 0 0 2 2 2 0 IstB-like ATP binding protein FtsK_SpoIIIE PF01580.18 RKO86921.1 - 0.026 13.9 0.0 0.93 8.8 0.0 2.4 2 0 0 2 2 2 0 FtsK/SpoIIIE family DUF815 PF05673.13 RKO86921.1 - 0.03 13.5 0.0 1.5 8.0 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF815) NTPase_1 PF03266.15 RKO86921.1 - 0.037 13.9 0.0 2.8 7.8 0.1 2.7 2 0 0 2 2 2 0 NTPase Pox_A32 PF04665.12 RKO86921.1 - 0.038 13.4 1.4 2.4 7.5 0.0 2.8 3 0 0 3 3 3 0 Poxvirus A32 protein NB-ARC PF00931.22 RKO86921.1 - 0.051 12.8 0.0 2.7 7.1 0.0 2.5 2 0 0 2 2 2 0 NB-ARC domain ATPase_2 PF01637.18 RKO86921.1 - 0.055 13.4 0.2 5.6 6.8 0.0 2.7 3 0 0 3 3 3 0 ATPase domain predominantly from Archaea PduV-EutP PF10662.9 RKO86921.1 - 0.056 13.2 0.1 6.6 6.5 0.0 3.1 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation Amidinotransf PF02274.17 RKO86921.1 - 0.072 12.2 0.1 0.12 11.5 0.1 1.3 1 0 0 1 1 1 0 Amidinotransferase KAP_NTPase PF07693.14 RKO86921.1 - 0.098 11.9 0.0 4.6 6.4 0.0 2.5 3 0 0 3 3 3 0 KAP family P-loop domain Mg_chelatase PF01078.21 RKO86921.1 - 0.14 11.5 0.1 4.2 6.7 0.0 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI MeaB PF03308.16 RKO86921.1 - 0.15 11.1 1.2 11 4.9 0.0 2.6 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB CLP1_P PF16575.5 RKO86921.1 - 0.15 11.8 0.3 5.3 6.8 0.0 2.4 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_13 PF13166.6 RKO86921.1 - 0.39 9.3 5.8 8.1 4.9 0.0 3.3 3 1 0 3 3 3 0 AAA domain DUF150 PF02576.17 RKO86922.1 - 0.2 12.1 0.0 0.36 11.3 0.0 1.4 1 0 0 1 1 1 0 RimP N-terminal domain Aldedh PF00171.22 RKO86923.1 - 6.7e-140 466.6 0.1 8.9e-140 466.2 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Aldedh PF00171.22 RKO86924.1 - 2.5e-93 313.1 0.2 3e-93 312.8 0.2 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Response_reg PF00072.24 RKO86925.1 - 2e-35 121.4 1.2 9.3e-18 64.4 0.1 3.5 3 0 0 3 3 3 2 Response regulator receiver domain HATPase_c PF02518.26 RKO86925.1 - 3.1e-27 95.3 0.0 6.9e-27 94.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 RKO86925.1 - 3.4e-13 49.4 1.0 1.3e-10 41.2 0.1 3.2 2 0 0 2 2 2 2 His Kinase A (phospho-acceptor) domain GAF PF01590.26 RKO86925.1 - 0.00049 20.7 0.0 0.08 13.6 0.0 2.7 2 0 0 2 2 2 1 GAF domain GAF_2 PF13185.6 RKO86925.1 - 0.0007 19.9 0.0 0.0033 17.7 0.0 2.2 2 0 0 2 2 2 1 GAF domain FleQ PF06490.11 RKO86925.1 - 0.0035 17.7 0.1 0.015 15.7 0.0 2.2 2 0 0 2 2 2 1 Flagellar regulatory protein FleQ Radial_spoke PF04712.12 RKO86925.1 - 0.027 13.4 0.2 0.47 9.3 0.0 2.1 2 0 0 2 2 2 0 Radial spokehead-like protein HATPase_c_3 PF13589.6 RKO86925.1 - 0.035 13.9 0.0 0.13 12.1 0.0 2.0 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Fzo_mitofusin PF04799.13 RKO86925.1 - 0.53 9.8 3.3 0.96 9.0 3.3 1.3 1 0 0 1 1 1 0 fzo-like conserved region zf-MYND PF01753.18 RKO86926.1 - 1.6e-11 44.1 4.3 2.9e-11 43.3 4.3 1.4 1 0 0 1 1 1 1 MYND finger QIL1 PF15884.5 RKO86927.1 - 0.039 14.6 0.0 0.095 13.3 0.0 1.6 1 0 0 1 1 1 0 MICOS complex subunit MIC13, QIL1 Sld5 PF05916.11 RKO86928.1 - 2e-08 34.6 0.7 3.2e-08 34.0 0.7 1.3 1 0 0 1 1 1 1 GINS complex protein GEP5 PF17053.5 RKO86928.1 - 0.036 13.9 0.1 0.045 13.6 0.1 1.1 1 0 0 1 1 1 0 Genetic interactor of prohibitin 5 Copper-bind PF00127.20 RKO86929.1 - 9.5e-07 29.2 0.3 2.2e-06 28.0 0.3 1.7 1 0 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family WD40 PF00400.32 RKO86930.1 - 2.3e-18 66.2 1.4 3.9e-08 33.8 0.1 3.0 3 0 0 3 3 3 2 WD domain, G-beta repeat Nup160 PF11715.8 RKO86930.1 - 0.12 11.0 0.2 0.26 9.9 0.1 1.5 1 1 0 2 2 2 0 Nucleoporin Nup120/160 Ank_2 PF12796.7 RKO86931.1 - 2.3e-07 31.3 0.1 0.017 15.7 0.0 4.3 2 1 3 5 5 5 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO86931.1 - 1.3e-05 25.6 2.0 2.5 8.8 0.1 5.3 6 1 0 6 6 6 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO86931.1 - 0.00073 19.8 0.1 62 4.1 0.0 5.0 5 0 0 5 5 5 0 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO86931.1 - 0.014 15.9 0.7 53 4.9 0.0 5.7 6 1 1 7 7 7 0 Ankyrin repeat Ank_4 PF13637.6 RKO86932.1 - 4.3e-12 46.3 1.9 0.067 13.8 0.0 5.2 3 1 2 5 5 5 5 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO86932.1 - 9.4e-08 32.6 0.0 0.15 12.7 0.0 4.1 2 1 2 4 4 4 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO86932.1 - 2.1e-05 24.7 3.0 0.62 10.5 0.0 5.5 4 1 2 6 6 6 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO86932.1 - 0.0015 18.8 2.9 73 4.4 0.0 5.6 6 0 0 6 6 6 0 Ankyrin repeat Atg14 PF10186.9 RKO86933.1 - 0.0036 16.4 9.0 0.0036 16.4 9.0 7.8 2 2 4 7 7 7 3 Vacuolar sorting 38 and autophagy-related subunit 14 TMF_TATA_bd PF12325.8 RKO86933.1 - 0.015 15.5 2.8 0.015 15.5 2.8 14.2 2 2 10 16 16 16 0 TATA element modulatory factor 1 TATA binding zf-CCHC PF00098.23 RKO86933.1 - 0.026 14.6 1.6 0.042 13.9 1.6 1.3 1 0 0 1 1 1 0 Zinc knuckle zf-CCHC_4 PF14392.6 RKO86933.1 - 0.055 13.2 1.8 0.11 12.3 0.8 2.1 2 0 0 2 2 2 0 Zinc knuckle HALZ PF02183.18 RKO86933.1 - 0.15 12.3 0.1 0.15 12.3 0.1 9.3 10 1 1 11 11 11 0 Homeobox associated leucine zipper Golgin_A5 PF09787.9 RKO86933.1 - 0.21 11.0 104.1 0.11 12.0 17.9 8.4 2 2 4 8 8 8 0 Golgin subfamily A member 5 Baculo_PEP_C PF04513.12 RKO86933.1 - 10 6.2 84.6 0.14 12.2 6.8 10.8 2 1 7 12 12 12 0 Baculovirus polyhedron envelope protein, PEP, C terminus DNA_pol_A_exo1 PF01612.20 RKO86935.1 - 1.4e-11 44.5 0.0 2.1e-11 43.9 0.0 1.2 1 0 0 1 1 1 1 3'-5' exonuclease Metal_resist PF13801.6 RKO86935.1 - 1.2 9.3 5.1 9.2 6.5 0.0 2.9 3 0 0 3 3 3 0 Heavy-metal resistance GRP PF07172.11 RKO86936.1 - 0.034 14.8 26.1 0.64 10.7 1.1 2.5 2 0 0 2 2 2 0 Glycine rich protein family Pardaxin PF07425.11 RKO86938.1 - 0.22 11.2 1.3 16 5.2 0.1 2.5 2 0 0 2 2 2 0 Pardaxin DUF3684 PF12449.8 RKO86939.1 - 4.6e-58 196.9 0.0 4.5e-52 177.1 0.0 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF3684) HATPase_c_3 PF13589.6 RKO86939.1 - 0.00032 20.6 0.0 0.0006 19.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GST_N PF02798.20 RKO86940.1 - 3.7e-16 59.2 0.0 7e-16 58.3 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 RKO86940.1 - 2.3e-15 56.5 0.0 3.3e-15 56.1 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 RKO86940.1 - 1.3e-14 54.3 0.0 2.4e-14 53.5 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 RKO86940.1 - 3.2e-13 49.8 0.0 5.6e-13 49.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 RKO86940.1 - 1.1e-09 38.2 0.1 1.8e-09 37.5 0.1 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 RKO86940.1 - 3e-08 33.8 0.0 5e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 RKO86940.1 - 0.13 12.1 0.0 0.26 11.1 0.0 1.6 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain FUSC_2 PF13515.6 RKO86941.1 - 0.068 13.3 2.1 0.093 12.9 2.1 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein-like ALMT PF11744.8 RKO86941.1 - 0.094 11.5 0.1 0.18 10.6 0.0 1.4 2 0 0 2 2 2 0 Aluminium activated malate transporter Asp PF00026.23 RKO86942.1 - 1.2e-12 48.0 0.1 1.6e-12 47.5 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO86942.1 - 0.015 15.5 0.0 0.02 15.1 0.0 1.3 1 0 0 1 1 1 0 Xylanase inhibitor N-terminal DUF2012 PF09430.10 RKO86944.1 - 0.0032 17.6 0.2 1.5 9.0 0.1 2.4 1 1 0 2 2 2 2 Protein of unknown function (DUF2012) DUF2759 PF10958.8 RKO86945.1 - 0.043 13.5 0.1 0.14 11.9 0.1 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2759) IL1 PF00340.19 RKO86945.1 - 0.043 13.5 0.4 0.25 11.0 0.0 2.3 3 0 0 3 3 3 0 Interleukin-1 / 18 DUF900 PF05990.12 RKO86948.1 - 1.9e-13 50.5 0.0 2.9e-13 49.9 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) Abhydrolase_6 PF12697.7 RKO86948.1 - 0.0071 17.0 4.5 0.01 16.5 0.7 2.3 2 0 0 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 RKO86948.1 - 0.039 13.6 0.0 0.098 12.3 0.0 1.6 2 0 0 2 2 2 0 alpha/beta hydrolase fold TctB PF07331.11 RKO86948.1 - 0.096 13.0 2.7 0.18 12.1 2.7 1.4 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family Ribonuc_red_lgC PF02867.15 RKO86949.1 - 1.8e-184 614.2 0.0 2.2e-184 613.8 0.0 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 RKO86949.1 - 9.8e-24 83.2 0.0 2.1e-23 82.1 0.0 1.6 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 RKO86949.1 - 2.6e-12 47.1 0.0 8.1e-12 45.6 0.0 1.9 2 0 0 2 2 2 1 ATP cone domain DUF4539 PF15072.6 RKO86952.1 - 1.8e-17 63.1 0.0 2.7e-17 62.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4539) Cullin PF00888.22 RKO86954.1 - 1.4e-207 691.2 0.1 1.7e-207 690.9 0.1 1.1 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 RKO86954.1 - 5.7e-29 100.0 4.2 8e-29 99.5 1.5 2.6 2 0 0 2 2 2 1 Cullin protein neddylation domain HTH_15 PF12324.8 RKO86954.1 - 0.04 13.9 0.0 0.11 12.4 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase Fibroin_P25 PF07294.11 RKO86955.1 - 0.017 15.2 0.0 0.024 14.7 0.0 1.1 1 0 0 1 1 1 0 Fibroin P25 Ank_2 PF12796.7 RKO86958.1 - 4.2e-06 27.3 0.1 0.25 12.0 0.1 2.9 3 0 0 3 3 3 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO86958.1 - 7.2e-06 26.2 0.1 0.4 11.1 0.0 3.4 3 1 1 4 4 4 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO86958.1 - 0.00011 22.7 0.1 0.75 10.5 0.0 3.4 2 2 1 3 3 3 2 Ankyrin repeats (many copies) PPR PF01535.20 RKO86958.1 - 2.5 8.6 3.5 15 6.1 0.0 2.8 3 0 0 3 3 3 0 PPR repeat KH_8 PF17903.1 RKO86960.1 - 2.2e-05 24.5 0.0 5.9e-05 23.1 0.0 1.6 2 0 0 2 2 2 1 Krr1 KH1 domain KH_1 PF00013.29 RKO86960.1 - 0.00051 19.8 0.6 0.00084 19.1 0.6 1.3 1 0 0 1 1 1 1 KH domain Fringe PF02434.16 RKO86961.1 - 2.1e-09 37.2 0.1 7.1e-09 35.5 0.0 1.7 2 0 0 2 2 2 1 Fringe-like DUF604 PF04646.12 RKO86961.1 - 9.8e-07 28.4 0.1 1.5e-06 27.8 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF604 Galactosyl_T PF01762.21 RKO86961.1 - 0.0066 16.3 0.0 0.011 15.6 0.0 1.2 1 0 0 1 1 1 1 Galactosyltransferase CCDC53 PF10152.9 RKO86961.1 - 0.042 14.3 6.2 1.1 9.6 0.0 3.2 3 0 0 3 3 3 0 Subunit CCDC53 of WASH complex Glyco_transf_34 PF05637.12 RKO86961.1 - 0.17 11.6 0.3 0.26 11.0 0.3 1.1 1 0 0 1 1 1 0 galactosyl transferase GMA12/MNN10 family DUF2405 PF10293.9 RKO86962.1 - 6.2e-07 29.5 0.0 1.1e-06 28.6 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2405) Agouti PF05039.12 RKO86962.1 - 0.058 14.1 0.7 0.13 13.0 0.7 1.5 1 0 0 1 1 1 0 Agouti protein F-box-like PF12937.7 RKO86963.1 - 1.9e-05 24.5 0.8 0.0071 16.2 0.1 2.9 2 0 0 2 2 2 2 F-box-like Mito_carr PF00153.27 RKO86964.1 - 2.6e-12 46.5 3.6 1.3e-06 28.2 0.1 2.6 2 1 0 2 2 2 2 Mitochondrial carrier protein Thiolase_N PF00108.23 RKO86965.1 - 0.082 12.3 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Thiolase, N-terminal domain ABC_membrane PF00664.23 RKO86966.1 - 2.2e-16 60.3 3.4 2.2e-16 60.3 3.4 2.3 2 0 0 2 2 2 1 ABC transporter transmembrane region ABC_tran PF00005.27 RKO86966.1 - 2.1e-13 51.0 0.0 4.1e-13 50.0 0.0 1.5 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 RKO86966.1 - 0.01 15.3 0.0 0.029 13.8 0.0 1.5 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_13 PF13166.6 RKO86966.1 - 0.041 12.5 0.0 0.059 12.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain ABC_membrane PF00664.23 RKO86967.1 - 0.074 12.7 0.2 0.074 12.7 0.2 1.3 2 0 0 2 2 2 0 ABC transporter transmembrane region Hydrolase_like PF13242.6 RKO86969.1 - 5.3e-19 68.1 0.0 7.6e-19 67.6 0.0 1.2 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.6 RKO86969.1 - 0.00069 19.7 0.0 0.00088 19.4 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 RKO86969.1 - 0.013 15.7 0.0 0.016 15.5 0.0 1.1 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase DUF1180 PF06679.12 RKO86974.1 - 0.21 12.0 0.3 0.3 11.5 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) F-box-like PF12937.7 RKO86975.1 - 0.0003 20.6 0.1 0.0018 18.1 0.0 2.4 3 0 0 3 3 3 1 F-box-like YbfN PF13982.6 RKO86976.1 - 0.7 10.2 4.1 0.82 10.0 0.2 2.4 2 0 0 2 2 2 0 YbfN-like lipoprotein WD40 PF00400.32 RKO86978.1 - 1e-10 42.0 8.0 1.6e-05 25.6 0.1 4.6 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO86978.1 - 0.003 17.8 0.1 0.052 13.8 0.0 2.6 2 1 0 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain AAA_lid_3 PF17862.1 RKO86979.1 - 9.9e-12 44.5 0.3 1.6e-11 43.8 0.3 1.3 1 0 0 1 1 1 1 AAA+ lid domain AAA PF00004.29 RKO86979.1 - 0.00016 22.1 0.0 0.00035 21.0 0.0 1.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Mu-like_Com PF10122.9 RKO86980.1 - 0.00091 18.6 8.8 0.092 12.2 2.1 2.4 2 0 0 2 2 2 2 Mu-like prophage protein Com zinc_ribbon_2 PF13240.6 RKO86980.1 - 0.048 13.4 4.1 2.2 8.1 0.8 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zf-CCHC_5 PF14787.6 RKO86980.1 - 0.081 12.6 9.3 1.5 8.6 1.4 2.6 2 0 0 2 2 2 0 GAG-polyprotein viral zinc-finger DUF2256 PF10013.9 RKO86980.1 - 0.1 12.7 2.6 1.5 9.0 0.2 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) zf-tcix PF14952.6 RKO86980.1 - 0.11 12.2 9.3 0.15 11.7 1.7 2.4 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding OrfB_Zn_ribbon PF07282.11 RKO86980.1 - 0.14 12.1 2.8 3.8 7.5 0.1 2.4 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-FPG_IleRS PF06827.14 RKO86980.1 - 0.37 10.7 9.7 4.2 7.3 2.6 2.5 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS NMD3 PF04981.13 RKO86980.1 - 0.52 9.7 1.5 0.68 9.3 1.5 1.1 1 0 0 1 1 1 0 NMD3 family Prim_Zn_Ribbon PF08273.12 RKO86980.1 - 0.66 10.3 4.2 15 6.0 0.4 2.7 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase DUF1451 PF07295.11 RKO86980.1 - 0.76 9.8 2.3 6 6.9 0.3 2.2 2 0 0 2 2 2 0 Zinc-ribbon containing domain zf-C2HC_2 PF13913.6 RKO86980.1 - 1.1 9.2 11.3 1.5 8.8 2.8 2.4 2 0 0 2 2 2 0 zinc-finger of a C2HC-type Zn-ribbon_8 PF09723.10 RKO86980.1 - 1.2 9.3 12.5 0.6 10.3 1.3 3.0 3 0 0 3 3 3 0 Zinc ribbon domain DZR PF12773.7 RKO86980.1 - 1.3 9.1 7.1 9 6.4 7.1 2.2 1 1 0 1 1 1 0 Double zinc ribbon Lar_restr_allev PF14354.6 RKO86980.1 - 1.7 9.1 4.5 5.3 7.5 0.3 2.4 2 0 0 2 2 2 0 Restriction alleviation protein Lar Zn_Tnp_IS1595 PF12760.7 RKO86980.1 - 2.1 8.4 8.2 6.8 6.8 1.0 2.4 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-ribbon_3 PF13248.6 RKO86980.1 - 2.2 7.8 5.6 18 4.9 0.7 2.6 2 0 0 2 2 2 0 zinc-ribbon domain Prok-RING_1 PF14446.6 RKO86980.1 - 4.5 7.3 5.2 9.4 6.3 0.6 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-CCHC PF00098.23 RKO86980.1 - 6.8 6.9 7.4 14 5.9 0.3 2.8 3 0 0 3 3 3 0 Zinc knuckle SIS PF01380.22 RKO86981.1 - 1.8e-50 170.2 0.2 9.3e-34 116.1 0.1 2.4 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 RKO86981.1 - 7.4e-18 65.0 0.0 1.7e-17 63.9 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 RKO86981.1 - 1e-12 48.1 0.0 2.2e-12 47.0 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 RKO86981.1 - 9.6e-05 21.4 0.0 0.00016 20.6 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II DUF2618 PF10940.8 RKO86981.1 - 1.8 8.4 5.2 3.4 7.6 0.8 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2618) DUF3808 PF10300.9 RKO86982.1 - 6.6e-16 58.1 0.0 8.3e-16 57.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3808) TPR_2 PF07719.17 RKO86982.1 - 0.0018 18.3 0.2 0.0038 17.2 0.2 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_9 PF13371.6 RKO86982.1 - 0.13 12.4 1.2 0.28 11.4 0.1 2.2 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF3808 PF10300.9 RKO86983.1 - 5.7e-98 328.7 0.0 7.2e-98 328.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3808) TPR_11 PF13414.6 RKO86983.1 - 0.044 13.5 0.3 2.9 7.6 0.0 3.4 3 1 1 4 4 4 0 TPR repeat 2OG-FeII_Oxy_3 PF13640.6 RKO86984.1 - 8.3e-20 71.5 0.0 1.2e-19 71.0 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 RKO86984.1 - 2.2e-08 34.6 0.0 3.4e-08 34.0 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_5 PF13759.6 RKO86984.1 - 0.15 12.5 0.0 0.27 11.7 0.0 1.5 1 0 0 1 1 1 0 Putative 2OG-Fe(II) oxygenase FAD_binding_4 PF01565.23 RKO86985.1 - 2.5e-17 62.9 6.3 6.3e-17 61.6 6.3 1.8 1 0 0 1 1 1 1 FAD binding domain BBE PF08031.12 RKO86985.1 - 2.2e-07 30.9 0.6 5.4e-07 29.6 0.0 1.9 2 0 0 2 2 2 1 Berberine and berberine like zf-MYND PF01753.18 RKO86986.1 - 7.6e-06 25.9 15.3 1.2e-05 25.3 15.3 1.3 1 0 0 1 1 1 1 MYND finger TatD_DNase PF01026.21 RKO86987.1 - 1.2e-47 162.4 0.0 1.3e-47 162.3 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase PHB_depo_C PF06850.11 RKO86988.1 - 0.11 11.9 0.2 1.7 8.0 0.1 2.1 2 0 0 2 2 2 0 PHB de-polymerase C-terminus Kei1 PF08552.11 RKO86988.1 - 0.88 9.4 3.8 6.4 6.6 0.0 2.1 2 0 0 2 2 2 0 Inositolphosphorylceramide synthase subunit Kei1 RRM_1 PF00076.22 RKO86989.1 - 3.4e-38 129.3 0.0 1.3e-18 66.5 0.0 3.1 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BRAP2 PF07576.12 RKO86989.1 - 5.7e-05 23.3 0.1 1.4 9.2 0.0 3.1 3 0 0 3 3 3 2 BRCA1-associated protein 2 SET_assoc PF11767.8 RKO86989.1 - 0.15 11.7 0.0 56 3.5 0.0 3.2 3 0 0 3 3 3 0 Histone lysine methyltransferase SET associated PGM_PMM_IV PF00408.20 RKO86990.1 - 8.9e-13 48.2 0.1 2.1e-12 47.0 0.1 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain PGM_PMM_III PF02880.16 RKO86990.1 - 0.042 14.0 0.3 0.17 12.1 0.3 2.0 1 1 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III McyA_C PF12593.8 RKO86990.1 - 0.22 11.4 0.7 1.6 8.6 0.4 2.2 2 0 0 2 2 2 0 Microcystin synthetase C terminal EF1G PF00647.19 RKO86991.1 - 2.4e-46 156.2 0.1 5e-46 155.2 0.1 1.6 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_N PF02798.20 RKO86991.1 - 3.1e-18 65.9 0.0 3.1e-18 65.9 0.0 2.6 3 0 0 3 3 3 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 RKO86991.1 - 1.2e-12 48.1 0.0 2.7e-12 46.9 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 RKO86991.1 - 3e-10 40.2 0.1 3e-10 40.2 0.1 2.5 2 1 0 2 2 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 RKO86991.1 - 6.4e-09 35.7 0.1 3.5e-08 33.3 0.1 2.1 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_N_2 PF13409.6 RKO86991.1 - 1.9e-07 31.3 0.0 4.6e-07 30.0 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_3 PF14497.6 RKO86991.1 - 0.00011 22.3 0.1 0.00046 20.3 0.1 2.0 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain FYDLN_acid PF09538.10 RKO86991.1 - 0.0039 17.8 2.9 0.0078 16.9 2.9 1.4 1 0 0 1 1 1 1 Protein of unknown function (FYDLN_acid) GST_N_5 PF18485.1 RKO86991.1 - 0.0055 17.0 0.0 0.013 15.8 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain RNA_pol_Rpc4 PF05132.14 RKO86991.1 - 0.026 15.0 1.3 0.045 14.2 1.3 1.4 1 0 0 1 1 1 0 RNA polymerase III RPC4 GST_C_6 PF17171.4 RKO86991.1 - 0.14 12.0 0.3 0.28 11.0 0.3 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain NARP1 PF12569.8 RKO86991.1 - 0.14 11.1 3.8 0.18 10.6 3.8 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 LYRIC PF15686.5 RKO86991.1 - 0.14 11.7 8.6 0.21 11.1 8.6 1.1 1 0 0 1 1 1 0 Lysine-rich CEACAM1 co-isolated protein family CPSF100_C PF13299.6 RKO86991.1 - 0.25 11.5 2.7 0.44 10.7 2.7 1.3 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal Pox_Ag35 PF03286.14 RKO86991.1 - 0.49 10.2 7.8 0.78 9.5 7.8 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein DUF3761 PF12587.8 RKO86992.1 - 0.074 13.5 0.4 0.13 12.7 0.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3761) BPS PF08947.10 RKO86992.1 - 0.5 10.2 6.9 1.1 9.1 1.0 3.4 1 1 2 3 3 3 0 BPS (Between PH and SH2) Vps5 PF09325.10 RKO86993.1 - 0.039 13.5 10.8 0.34 10.4 0.3 2.6 2 1 0 2 2 2 0 Vps5 C terminal like Cnn_1N PF07989.11 RKO86993.1 - 1.4 9.1 8.1 2.8 8.2 0.4 3.8 3 1 1 4 4 4 0 Centrosomin N-terminal motif 1 COG2 PF06148.11 RKO86993.1 - 7.3 6.7 5.9 7.1 6.7 1.4 2.7 2 1 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF1242 PF06842.12 RKO86994.1 - 4.5e-20 71.1 3.3 6e-20 70.7 3.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1242) ECH_1 PF00378.20 RKO86995.1 - 1.5e-44 152.2 0.0 1.6e-44 152.1 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 RKO86995.1 - 7.1e-27 94.8 0.0 7.9e-27 94.6 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ERO1 PF04137.15 RKO86996.1 - 1.8e-122 409.0 0.0 2.1e-122 408.8 0.0 1.0 1 0 0 1 1 1 1 Endoplasmic Reticulum Oxidoreductin 1 (ERO1) RNase_PH PF01138.21 RKO86997.1 - 2.2e-20 73.5 0.0 1.1e-19 71.2 0.0 2.1 2 1 0 2 2 2 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 RKO86997.1 - 3e-11 43.2 0.0 6.1e-11 42.2 0.0 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 APH PF01636.23 RKO86998.1 - 3.3e-08 33.8 0.2 3.9e-08 33.5 0.2 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family EcKinase PF02958.20 RKO86998.1 - 6.9e-08 32.1 0.0 7.7e-08 32.0 0.0 1.0 1 0 0 1 1 1 1 Ecdysteroid kinase DUF1679 PF07914.11 RKO86998.1 - 7.6e-05 21.7 0.0 9.5e-05 21.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1679) LRR_4 PF12799.7 RKO87002.1 - 0.0064 16.9 0.3 9.6 6.8 0.0 4.0 3 1 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_4 PF12799.7 RKO87003.1 - 0.053 14.0 4.1 4.2 7.9 0.0 3.0 3 0 0 3 3 3 0 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 RKO87003.1 - 0.06 13.4 1.5 2.8 8.2 0.0 3.1 3 0 0 3 3 3 0 Leucine Rich repeat Cyclin PF08613.11 RKO87005.1 - 7e-33 114.3 0.0 8.7e-33 114.0 0.0 1.1 1 0 0 1 1 1 1 Cyclin Mago-bind PF09282.10 RKO87006.1 - 2.1e-15 56.2 1.1 2.1e-15 56.2 1.1 1.5 2 0 0 2 2 2 1 Mago binding NigD_N PF12667.7 RKO87006.1 - 0.087 12.9 0.0 0.091 12.9 0.0 1.1 1 0 0 1 1 1 0 NigD-like N-terminal OB domain Peptidase_M41 PF01434.18 RKO87009.1 - 1.4e-63 214.2 0.1 2e-63 213.7 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 RKO87009.1 - 5.6e-43 146.5 0.0 1.1e-42 145.5 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 RKO87009.1 - 4.4e-14 52.0 0.5 9.9e-14 50.9 0.5 1.6 1 0 0 1 1 1 1 AAA+ lid domain FtsH_ext PF06480.15 RKO87009.1 - 9.2e-12 45.3 0.0 3.2e-11 43.6 0.0 1.9 2 0 0 2 2 2 1 FtsH Extracellular AAA_16 PF13191.6 RKO87009.1 - 0.0011 19.3 0.6 0.061 13.7 0.1 3.1 2 1 0 3 3 3 1 AAA ATPase domain RuvB_N PF05496.12 RKO87009.1 - 0.0042 16.8 0.0 0.0085 15.9 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 RKO87009.1 - 0.0049 16.1 0.0 0.0081 15.4 0.0 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_5 PF07728.14 RKO87009.1 - 0.0084 16.1 0.0 0.037 14.0 0.0 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 RKO87009.1 - 0.012 15.9 0.1 0.44 10.8 0.1 2.6 1 1 0 1 1 1 0 AAA domain AAA_2 PF07724.14 RKO87009.1 - 0.044 13.9 0.0 0.15 12.1 0.0 2.0 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_17 PF13207.6 RKO87009.1 - 0.051 14.0 0.0 0.14 12.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 RKO87009.1 - 0.055 13.2 0.0 0.16 11.7 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_28 PF13521.6 RKO87009.1 - 0.15 12.3 1.4 0.57 10.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain Lipase_GDSL_2 PF13472.6 RKO87010.1 - 1.5e-07 32.0 0.1 5.2e-07 30.2 0.1 1.8 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 RKO87010.1 - 0.00027 21.0 0.0 0.00045 20.2 0.0 1.4 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase Scramblase PF03803.15 RKO87011.1 - 4.4e-21 75.2 0.0 5.5e-21 74.9 0.0 1.1 1 0 0 1 1 1 1 Scramblase Hydantoinase_A PF01968.18 RKO87012.1 - 4.6e-97 324.8 0.0 7.7e-97 324.0 0.0 1.4 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase Hydantoinase_B PF02538.14 RKO87012.1 - 7.5e-86 288.6 0.0 1.2e-85 287.9 0.0 1.3 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Hydant_A_N PF05378.13 RKO87012.1 - 1e-33 116.5 0.0 8.5e-32 110.3 0.0 2.3 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region SP_C-Propep PF08999.10 RKO87014.1 - 0.011 15.5 3.0 0.92 9.3 0.3 2.5 1 1 1 2 2 2 0 Surfactant protein C, N terminal propeptide AMP_N PF05195.16 RKO87015.1 - 4.8e-34 116.7 0.0 7.2e-34 116.2 0.0 1.2 1 0 0 1 1 1 1 Aminopeptidase P, N-terminal domain Peptidase_M24 PF00557.24 RKO87015.1 - 2.6e-32 112.2 0.0 3.5e-32 111.8 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 HSP20 PF00011.21 RKO87016.1 - 9.5e-21 73.9 1.0 1.2e-20 73.5 1.0 1.2 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 RKO87016.1 - 1e-10 41.0 0.1 1.6e-10 40.3 0.1 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA GvpH PF05455.11 RKO87016.1 - 0.025 14.7 0.4 0.039 14.0 0.4 1.5 1 1 0 1 1 1 0 GvpH FKBP26_C PF18046.1 RKO87016.1 - 0.026 14.6 1.5 0.1 12.7 0.1 2.2 2 0 0 2 2 2 0 FKBP26_C-terminal Peptidase_S10 PF00450.22 RKO87017.1 - 5.6e-46 157.8 0.1 7e-46 157.5 0.1 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase Abhydrolase_3 PF07859.13 RKO87020.1 - 4.4e-08 33.2 0.0 5.3e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Usp PF00582.26 RKO87021.1 - 6.7e-07 29.9 0.0 8.9e-07 29.5 0.0 1.3 1 0 0 1 1 1 1 Universal stress protein family Usp PF00582.26 RKO87022.1 - 3.3e-19 69.8 0.1 3.6e-19 69.7 0.1 1.1 1 0 0 1 1 1 1 Universal stress protein family Kelch_4 PF13418.6 RKO87023.1 - 1.3e-21 76.3 15.7 2.4e-06 27.4 0.4 5.9 6 0 0 6 6 6 4 Galactose oxidase, central domain Kelch_3 PF13415.6 RKO87023.1 - 2.6e-20 72.2 19.2 6.4e-07 29.5 0.1 5.6 5 0 0 5 5 5 5 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO87023.1 - 8.8e-17 60.7 12.6 5.4e-08 32.6 0.5 4.9 4 0 0 4 4 4 3 Kelch motif Kelch_6 PF13964.6 RKO87023.1 - 8.1e-15 54.5 22.3 0.0027 17.9 0.1 6.2 5 1 1 6 6 6 5 Kelch motif Kelch_1 PF01344.25 RKO87023.1 - 1.3e-09 37.5 14.2 0.00096 18.7 0.5 4.9 5 0 0 5 5 5 3 Kelch motif Kelch_2 PF07646.15 RKO87023.1 - 6.6e-09 35.4 11.5 0.0018 18.2 0.5 5.3 5 0 0 5 5 5 4 Kelch motif DcpS_C PF11969.8 RKO87024.1 - 7.6e-32 110.2 0.1 1.4e-31 109.3 0.1 1.4 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding DcpS PF05652.12 RKO87024.1 - 3.9e-21 75.8 0.0 6.5e-21 75.1 0.0 1.4 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme (DcpS) N-terminal WD40 PF00400.32 RKO87026.1 - 0.0016 19.3 0.3 0.013 16.3 0.1 2.5 2 0 0 2 2 2 1 WD domain, G-beta repeat ARS2 PF04959.13 RKO87029.1 - 0.16 12.3 2.0 0.21 11.9 2.0 1.2 1 0 0 1 1 1 0 Arsenite-resistance protein 2 RNA_lig_T4_1 PF09511.10 RKO87030.1 - 8.1e-05 22.6 0.0 0.00011 22.1 0.0 1.2 1 0 0 1 1 1 1 RNA ligase DUF4570 PF15134.6 RKO87030.1 - 0.12 12.4 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4570) Cytochrom_B561 PF03188.16 RKO87035.1 - 9.4e-07 29.0 0.2 1.6e-06 28.3 0.1 1.4 1 1 0 1 1 1 1 Eukaryotic cytochrome b561 DUF4079 PF13301.6 RKO87035.1 - 0.01 16.0 0.2 0.01 16.0 0.2 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4079) Aldedh PF00171.22 RKO87037.1 - 4.9e-49 167.1 0.1 5.4e-49 166.9 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family DUF1487 PF07368.11 RKO87037.1 - 0.043 13.3 0.0 0.067 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1487) CCG PF02754.16 RKO87037.1 - 0.091 13.0 0.0 0.19 12.0 0.0 1.5 2 0 0 2 2 2 0 Cysteine-rich domain Hydrolase_4 PF12146.8 RKO87038.1 - 4.2e-09 36.0 0.0 8.1e-05 22.0 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 RKO87038.1 - 0.00021 21.0 0.0 0.4 10.3 0.0 2.2 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 RKO87038.1 - 0.021 14.9 0.0 0.054 13.6 0.0 1.6 2 0 0 2 2 2 0 TAP-like protein FSH1 PF03959.13 RKO87038.1 - 0.044 13.4 0.0 0.37 10.4 0.0 2.0 1 1 0 1 1 1 0 Serine hydrolase (FSH1) LIP PF03583.14 RKO87038.1 - 0.059 12.7 0.1 0.1 11.9 0.1 1.3 1 0 0 1 1 1 0 Secretory lipase Abhydrolase_5 PF12695.7 RKO87038.1 - 0.17 11.6 0.0 0.29 10.9 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family Mannosyl_trans3 PF11051.8 RKO87039.1 - 5.4e-21 75.1 0.0 7e-21 74.8 0.0 1.1 1 0 0 1 1 1 1 Mannosyltransferase putative RRM_1 PF00076.22 RKO87041.1 - 3e-38 129.5 0.0 5.6e-19 67.7 0.0 2.0 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Acetyltransf_7 PF13508.7 RKO87041.1 - 0.0098 16.3 0.0 0.018 15.5 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Limkain-b1 PF11608.8 RKO87041.1 - 0.031 14.3 0.1 0.41 10.8 0.0 2.4 2 1 1 3 3 3 0 Limkain b1 RRM_5 PF13893.6 RKO87041.1 - 0.034 13.8 0.0 2.2 7.9 0.0 2.1 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Acetyltransf_1 PF00583.25 RKO87041.1 - 0.07 13.4 0.0 0.25 11.6 0.0 1.8 2 0 0 2 2 2 0 Acetyltransferase (GNAT) family DUF3932 PF13068.6 RKO87041.1 - 0.07 13.4 0.0 2.3 8.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3932) RRM_7 PF16367.5 RKO87041.1 - 0.092 12.9 0.0 1.5 9.0 0.0 2.2 2 0 0 2 2 2 0 RNA recognition motif Ldh_1_N PF00056.23 RKO87042.1 - 1.1e-33 116.3 0.3 1.5e-33 115.9 0.3 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 RKO87042.1 - 2.4e-12 47.1 0.0 3.9e-12 46.4 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain ApbA PF02558.16 RKO87042.1 - 0.00023 20.9 0.4 0.0029 17.3 0.4 2.1 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA AlaDh_PNT_C PF01262.21 RKO87042.1 - 0.00051 19.4 0.4 0.00084 18.7 0.4 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Glyco_hydro_4 PF02056.16 RKO87042.1 - 0.001 18.7 0.1 0.23 11.0 0.0 2.3 2 0 0 2 2 2 2 Family 4 glycosyl hydrolase DAO PF01266.24 RKO87042.1 - 0.0013 18.3 2.2 0.0019 17.9 1.0 1.7 1 1 1 2 2 2 1 FAD dependent oxidoreductase PEP_hydrolase PF09370.10 RKO87042.1 - 0.0022 17.3 0.0 0.0034 16.6 0.0 1.3 1 0 0 1 1 1 1 Phosphoenolpyruvate hydrolase-like 3HCDH_N PF02737.18 RKO87042.1 - 0.0025 17.7 0.1 0.0034 17.3 0.1 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OCD_Mu_crystall PF02423.15 RKO87042.1 - 0.0034 16.4 0.1 0.0051 15.8 0.1 1.2 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family ThiF PF00899.21 RKO87042.1 - 0.0058 16.0 0.0 0.011 15.2 0.0 1.4 1 0 0 1 1 1 1 ThiF family UDPG_MGDP_dh_N PF03721.14 RKO87042.1 - 0.007 16.0 0.1 0.014 15.0 0.1 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_8 PF13450.6 RKO87042.1 - 0.0073 16.5 0.2 0.036 14.3 0.2 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain F420_oxidored PF03807.17 RKO87042.1 - 0.018 15.6 2.2 0.14 12.8 0.3 2.6 2 1 1 3 3 2 0 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.23 RKO87042.1 - 0.02 14.9 0.1 1.3 9.0 0.0 2.7 3 0 0 3 3 3 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox_2 PF07992.14 RKO87042.1 - 0.045 13.0 0.1 0.096 11.9 0.0 1.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 RKO87042.1 - 0.087 13.1 0.1 0.24 11.6 0.1 1.8 1 1 0 1 1 1 0 TrkA-N domain Sacchrp_dh_NADP PF03435.18 RKO87042.1 - 0.12 12.7 0.2 0.29 11.4 0.1 1.8 2 0 0 2 2 1 0 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 RKO87042.1 - 0.14 11.5 0.0 0.3 10.4 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F-box-like PF12937.7 RKO87043.1 - 1.5e-11 44.0 0.0 3.8e-11 42.7 0.0 1.8 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO87043.1 - 1.5e-08 34.3 0.0 2.7e-08 33.5 0.0 1.5 1 0 0 1 1 1 1 F-box domain DUF2267 PF10025.9 RKO87043.1 - 0.067 13.5 0.1 0.13 12.6 0.1 1.6 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) MgtE_N PF03448.17 RKO87043.1 - 0.16 12.6 0.0 0.35 11.5 0.0 1.5 1 0 0 1 1 1 0 MgtE intracellular N domain LRR_4 PF12799.7 RKO87044.1 - 4.8e-17 61.8 23.2 0.00014 22.2 0.1 4.5 4 1 1 5 5 5 4 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 RKO87044.1 - 1.3e-12 47.6 8.6 1.5e-07 31.1 2.0 2.3 1 1 1 2 2 2 2 Leucine-rich repeat LRR_8 PF13855.6 RKO87044.1 - 9.9e-11 41.3 24.9 3.2e-05 23.6 3.0 4.3 2 2 2 4 4 4 4 Leucine rich repeat zf-C2H2 PF00096.26 RKO87045.1 - 2.9e-10 40.0 6.1 0.00021 21.6 0.1 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO87045.1 - 1.9e-08 34.4 7.9 1.3e-05 25.6 2.1 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO87045.1 - 8e-08 32.4 6.6 0.00092 19.5 0.2 3.1 3 0 0 3 3 3 3 Zinc-finger double domain zf-met PF12874.7 RKO87045.1 - 5.5e-06 26.6 1.0 2.2e-05 24.7 0.6 2.0 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 RKO87045.1 - 0.00017 21.7 1.2 0.00018 21.7 0.3 1.6 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2H2_11 PF16622.5 RKO87045.1 - 0.0088 15.8 3.7 0.16 11.8 0.2 2.3 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-C2H2_2 PF12756.7 RKO87045.1 - 0.0092 16.3 1.7 0.042 14.2 0.6 1.9 1 1 1 2 2 2 1 C2H2 type zinc-finger (2 copies) zf-C2H2_6 PF13912.6 RKO87045.1 - 0.014 15.4 4.7 0.14 12.2 2.8 2.5 2 1 0 2 2 2 0 C2H2-type zinc finger zf-H2C2_5 PF13909.6 RKO87045.1 - 1.2 9.0 12.6 1.1 9.1 0.5 2.6 3 0 0 3 3 3 0 C2H2-type zinc-finger domain RRM_1 PF00076.22 RKO87046.1 - 5.3e-16 58.2 0.0 7.3e-16 57.8 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 RKO87046.1 - 0.0035 16.9 0.0 0.0061 16.1 0.0 1.3 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 RKO87046.1 - 0.019 15.1 0.0 0.023 14.8 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif PPR_3 PF13812.6 RKO87047.1 - 0.0074 16.3 0.0 0.02 14.9 0.0 1.7 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR_long PF17177.4 RKO87047.1 - 0.012 14.9 0.1 3.4 7.0 0.0 3.2 3 1 1 4 4 4 0 Pentacotripeptide-repeat region of PRORP PPR PF01535.20 RKO87047.1 - 0.04 14.2 0.0 12 6.4 0.0 3.1 2 0 0 2 2 2 0 PPR repeat PPR_2 PF13041.6 RKO87047.1 - 0.071 13.3 0.0 0.32 11.2 0.0 2.0 2 0 0 2 2 2 0 PPR repeat family Arf PF00025.21 RKO87048.1 - 4.7e-18 65.2 0.0 5.2e-18 65.1 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family EF-hand_1 PF00036.32 RKO87049.1 - 3.5e-15 54.3 0.9 2.2e-06 26.8 0.1 3.3 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 RKO87049.1 - 7.8e-14 50.5 1.7 2.8e-06 26.6 0.0 3.1 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 RKO87049.1 - 2.3e-11 42.7 5.2 1.2e-05 24.8 0.1 3.8 4 0 0 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 RKO87049.1 - 2.4e-10 40.7 0.1 0.00076 19.9 0.0 3.0 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 RKO87049.1 - 9.7e-09 35.0 5.2 0.00058 19.7 0.3 3.2 3 1 1 4 4 4 2 EF-hand domain pair SPARC_Ca_bdg PF10591.9 RKO87049.1 - 0.19 12.0 0.0 5.1 7.5 0.0 2.3 2 0 0 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region Arf PF00025.21 RKO87050.1 - 4.7e-18 65.2 0.0 5.2e-18 65.1 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Vps62 PF06101.11 RKO87053.1 - 1.8e-12 46.4 0.2 4.9e-09 35.0 0.1 2.2 2 0 0 2 2 2 2 Vacuolar protein sorting-associated protein 62 MCM PF00493.23 RKO87054.1 - 7.1e-103 342.5 0.1 1.1e-102 342.0 0.1 1.3 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 RKO87054.1 - 3e-32 111.1 0.2 5.6e-32 110.3 0.2 1.4 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 RKO87054.1 - 9.7e-21 74.0 0.0 2.1e-20 72.9 0.0 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 RKO87054.1 - 4.4e-09 36.0 0.1 7.7e-06 25.4 0.0 2.5 1 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 RKO87054.1 - 2.4e-07 30.9 0.1 1.4e-06 28.3 0.0 2.5 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) MCM_N PF14551.6 RKO87054.1 - 0.0019 18.7 0.0 0.0056 17.2 0.0 1.8 1 0 0 1 1 1 1 MCM N-terminal domain DUF4417 PF14386.6 RKO87054.1 - 0.021 14.4 0.1 7.4 6.1 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4417) AAA_3 PF07726.11 RKO87054.1 - 0.026 14.4 0.1 0.13 12.2 0.1 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 RKO87054.1 - 0.026 14.2 0.1 0.29 10.8 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_lid_2 PF17863.1 RKO87054.1 - 0.049 13.5 0.1 0.13 12.1 0.1 1.7 1 0 0 1 1 1 0 AAA lid domain AAA_16 PF13191.6 RKO87054.1 - 0.073 13.4 0.3 1.9 8.8 0.0 2.7 1 1 0 2 2 2 0 AAA ATPase domain Zn-ribbon_8 PF09723.10 RKO87054.1 - 0.17 12.0 1.5 0.48 10.6 1.5 1.7 1 0 0 1 1 1 0 Zinc ribbon domain XhlA PF10779.9 RKO87055.1 - 0.015 15.5 1.0 6.3 7.1 0.1 2.7 2 0 0 2 2 2 0 Haemolysin XhlA Rootletin PF15035.6 RKO87055.1 - 0.11 12.6 3.2 0.16 12.0 3.2 1.3 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion Umbravirus_LDM PF04817.12 RKO87056.1 - 0.16 11.3 0.1 0.18 11.1 0.1 1.1 1 0 0 1 1 1 0 Umbravirus long distance movement (LDM) family HMG_CoA_synt_C PF08540.10 RKO87057.1 - 9.4e-94 314.1 0.3 1.2e-93 313.8 0.3 1.1 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal HMG_CoA_synt_N PF01154.17 RKO87057.1 - 1.2e-90 302.1 0.1 1.7e-90 301.5 0.1 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal eRF1_1 PF03463.15 RKO87059.1 - 4.9e-52 175.3 0.6 7.3e-52 174.8 0.6 1.3 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_2 PF03464.15 RKO87059.1 - 1.4e-30 106.3 0.1 2.2e-30 105.7 0.1 1.3 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 RKO87059.1 - 5.6e-10 39.7 0.1 6.8e-09 36.2 0.0 2.4 2 0 0 2 2 2 1 eRF1 domain 3 DUF424 PF04242.13 RKO87059.1 - 0.028 14.7 0.0 0.13 12.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF424) DUF1938 PF09153.10 RKO87059.1 - 0.051 13.7 0.1 0.11 12.6 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1938) BCSC_C PF05420.11 RKO87059.1 - 0.059 12.5 0.0 0.082 12.0 0.0 1.1 1 0 0 1 1 1 0 Cellulose synthase operon protein C C-terminus (BCSC_C) Integrase_H2C2 PF17921.1 RKO87060.1 - 3e-08 33.6 0.1 3.6e-08 33.4 0.1 1.1 1 0 0 1 1 1 1 Integrase zinc binding domain DUF4734 PF15881.5 RKO87061.1 - 0.015 15.5 0.1 0.022 14.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4734) SF3A2 PF16835.5 RKO87062.1 - 4e-40 136.1 0.0 5.7e-40 135.6 0.0 1.2 1 0 0 1 1 1 1 Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) zf-met PF12874.7 RKO87062.1 - 4.1e-07 30.2 2.0 4.1e-07 30.2 2.0 1.7 2 0 0 2 2 2 1 Zinc-finger of C2H2 type CactinC_cactus PF09732.9 RKO87062.1 - 3.2e-06 27.1 0.2 4.9e-06 26.5 0.2 1.2 1 0 0 1 1 1 1 Cactus-binding C-terminus of cactin protein PRP4 PF08799.11 RKO87062.1 - 0.017 14.7 0.9 0.029 13.9 0.9 1.4 1 0 0 1 1 1 0 pre-mRNA processing factor 4 (PRP4) like zf-C2H2_jaz PF12171.8 RKO87062.1 - 6.3 7.2 6.6 12 6.3 5.0 2.3 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding Radial_spoke_3 PF06098.11 RKO87063.1 - 0.062 12.6 0.2 0.077 12.3 0.2 1.1 1 0 0 1 1 1 0 Radial spoke protein 3 ABC_tran PF00005.27 RKO87064.1 - 6.8e-08 33.1 0.0 7.4e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_30 PF13604.6 RKO87064.1 - 3.3e-05 23.7 0.0 3.9e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 RKO87064.1 - 5.8e-05 22.8 0.0 8.1e-05 22.3 0.0 1.3 1 1 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 RKO87064.1 - 8.5e-05 23.0 0.0 9e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 RKO87064.1 - 0.00039 19.8 0.0 0.00046 19.5 0.0 1.0 1 0 0 1 1 1 1 Zeta toxin AAA_23 PF13476.6 RKO87064.1 - 0.00042 20.9 0.0 0.00052 20.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 RKO87064.1 - 0.00055 19.9 0.0 0.00058 19.8 0.0 1.1 1 0 0 1 1 1 1 RsgA GTPase AAA_27 PF13514.6 RKO87064.1 - 0.0015 18.2 0.0 0.0019 17.9 0.0 1.1 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 RKO87064.1 - 0.0021 17.5 0.0 0.0025 17.2 0.0 1.1 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI NACHT PF05729.12 RKO87064.1 - 0.0021 18.0 0.0 0.0027 17.6 0.0 1.2 1 0 0 1 1 1 1 NACHT domain PIF1 PF05970.14 RKO87064.1 - 0.0022 17.2 0.0 0.0024 17.1 0.0 1.0 1 0 0 1 1 1 1 PIF1-like helicase Rad17 PF03215.15 RKO87064.1 - 0.0024 17.8 0.0 0.0029 17.5 0.0 1.1 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_21 PF13304.6 RKO87064.1 - 0.0033 17.3 0.1 0.004 17.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_5 PF07728.14 RKO87064.1 - 0.0037 17.3 0.0 0.0053 16.7 0.0 1.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) TsaE PF02367.17 RKO87064.1 - 0.011 15.7 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_22 PF13401.6 RKO87064.1 - 0.014 15.6 0.0 0.018 15.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 RKO87064.1 - 0.015 15.9 0.1 0.019 15.5 0.1 1.2 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 RKO87064.1 - 0.015 14.4 0.0 0.015 14.4 0.0 1.0 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_33 PF13671.6 RKO87064.1 - 0.016 15.4 0.1 0.019 15.1 0.1 1.1 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 RKO87064.1 - 0.025 15.0 0.0 0.031 14.6 0.0 1.1 1 0 0 1 1 1 0 RNA helicase DUF815 PF05673.13 RKO87064.1 - 0.026 13.7 0.0 0.026 13.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF815) NTPase_1 PF03266.15 RKO87064.1 - 0.028 14.3 0.0 0.037 13.9 0.0 1.1 1 0 0 1 1 1 0 NTPase IstB_IS21 PF01695.17 RKO87064.1 - 0.029 14.1 0.0 0.031 14.0 0.0 1.1 1 0 0 1 1 1 0 IstB-like ATP binding protein ATP_bind_1 PF03029.17 RKO87064.1 - 0.03 14.1 0.0 0.038 13.8 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein MeaB PF03308.16 RKO87064.1 - 0.034 13.1 0.0 0.034 13.1 0.0 1.0 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_PrkA PF08298.11 RKO87064.1 - 0.035 13.0 0.0 0.035 13.0 0.0 1.0 1 0 0 1 1 1 0 PrkA AAA domain APS_kinase PF01583.20 RKO87064.1 - 0.042 13.7 0.0 0.049 13.5 0.0 1.1 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA PF00004.29 RKO87064.1 - 0.046 14.1 0.1 0.074 13.5 0.1 1.4 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) Cytidylate_kin PF02224.18 RKO87064.1 - 0.065 13.0 0.0 0.085 12.6 0.0 1.2 1 0 0 1 1 1 0 Cytidylate kinase cobW PF02492.19 RKO87064.1 - 0.069 12.7 0.1 0.075 12.6 0.1 1.1 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_24 PF13479.6 RKO87064.1 - 0.07 12.9 0.0 0.078 12.7 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 RKO87064.1 - 0.077 13.2 0.1 0.098 12.9 0.1 1.2 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 RKO87064.1 - 0.079 12.4 0.0 0.085 12.3 0.0 1.1 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain NB-ARC PF00931.22 RKO87064.1 - 0.097 11.8 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain MMR_HSR1 PF01926.23 RKO87064.1 - 0.11 12.6 0.1 0.13 12.4 0.1 1.2 1 0 0 1 1 1 0 50S ribosome-binding GTPase Adeno_IVa2 PF02456.15 RKO87064.1 - 0.12 11.1 0.0 0.12 11.1 0.0 1.0 1 0 0 1 1 1 0 Adenovirus IVa2 protein AAA_7 PF12775.7 RKO87064.1 - 0.17 11.4 0.0 0.19 11.3 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_14 PF13173.6 RKO87064.1 - 0.19 11.7 0.0 0.23 11.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain dNK PF01712.19 RKO87064.1 - 0.22 11.4 0.0 0.27 11.1 0.0 1.1 1 0 0 1 1 1 0 Deoxynucleoside kinase MCM PF00493.23 RKO87064.1 - 0.23 10.6 0.0 0.27 10.3 0.0 1.1 1 0 0 1 1 1 0 MCM P-loop domain PRK PF00485.18 RKO87064.1 - 0.24 11.1 0.0 0.29 10.9 0.0 1.1 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_15 PF13175.6 RKO87064.1 - 0.29 10.8 0.0 0.34 10.6 0.0 1.0 1 0 0 1 1 1 0 AAA ATPase domain NUDIX PF00293.28 RKO87065.1 - 1.3e-15 57.6 0.1 2.2e-15 56.9 0.1 1.4 1 0 0 1 1 1 1 NUDIX domain zf-Di19 PF05605.12 RKO87065.1 - 1.8e-08 34.6 3.5 3.4e-08 33.7 3.5 1.5 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding Lar_restr_allev PF14354.6 RKO87065.1 - 0.16 12.4 0.3 0.44 11.0 0.3 1.7 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-C2H2_4 PF13894.6 RKO87065.1 - 5.9 8.0 12.1 0.21 12.5 1.7 3.4 4 0 0 4 4 4 0 C2H2-type zinc finger Sigma70_ner PF04546.13 RKO87065.1 - 6.1 6.7 8.0 9.6 6.0 8.0 1.2 1 0 0 1 1 1 0 Sigma-70, non-essential region Pkinase PF00069.25 RKO87066.1 - 0.0044 16.4 0.0 0.0052 16.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain RSN1_7TM PF02714.15 RKO87072.1 - 1.4e-45 155.7 17.5 2.3e-45 155.1 17.5 1.3 1 0 0 1 1 1 1 Calcium-dependent channel, 7TM region, putative phosphate PHM7_cyt PF14703.6 RKO87072.1 - 1.7e-30 106.5 0.0 2.7e-30 105.9 0.0 1.3 1 0 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter RSN1_TM PF13967.6 RKO87072.1 - 5.1e-19 68.6 4.4 7.4e-19 68.0 1.4 2.9 2 1 0 2 2 2 1 Late exocytosis, associated with Golgi transport PDR_assoc PF08370.11 RKO87072.1 - 0.016 15.0 1.0 0.077 12.7 1.0 2.2 1 0 0 1 1 1 0 Plant PDR ABC transporter associated Acetyltransf_1 PF00583.25 RKO87076.1 - 3.9e-06 27.1 0.2 5.7e-06 26.6 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_6 PF13480.7 RKO87076.1 - 0.025 14.7 0.6 0.04 14.1 0.6 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 RKO87076.1 - 0.037 14.0 0.1 0.07 13.1 0.1 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain AAA PF00004.29 RKO87077.1 - 4.2e-42 143.7 0.0 6.4e-42 143.1 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 RKO87077.1 - 5.3e-09 36.4 0.0 8.7e-09 35.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 RKO87077.1 - 1.4e-06 28.3 0.0 4.4e-06 26.7 0.0 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 RKO87077.1 - 0.00012 22.4 0.1 0.0026 18.0 0.1 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 RKO87077.1 - 0.00015 22.2 0.0 0.00073 20.0 0.0 2.0 2 1 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 RKO87077.1 - 0.00032 20.8 0.0 0.00046 20.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 RKO87077.1 - 0.0037 17.6 0.0 0.0072 16.7 0.0 1.5 1 0 0 1 1 1 1 RNA helicase TniB PF05621.11 RKO87077.1 - 0.0059 16.0 0.0 1.2 8.5 0.0 2.2 1 1 1 2 2 2 1 Bacterial TniB protein AAA_33 PF13671.6 RKO87077.1 - 0.01 16.0 0.0 0.014 15.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 RKO87077.1 - 0.011 15.1 0.1 0.022 14.1 0.0 1.5 1 1 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 RKO87077.1 - 0.012 15.1 0.0 0.017 14.6 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Sigma54_activat PF00158.26 RKO87077.1 - 0.018 14.8 0.0 0.064 13.0 0.0 1.9 1 1 0 1 1 1 0 Sigma-54 interaction domain ResIII PF04851.15 RKO87077.1 - 0.019 15.0 0.0 0.027 14.5 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit RuvB_N PF05496.12 RKO87077.1 - 0.019 14.7 0.0 0.077 12.7 0.0 2.2 1 1 1 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain AAA_25 PF13481.6 RKO87077.1 - 0.023 14.3 0.1 0.24 11.0 0.0 2.1 1 1 1 2 2 2 0 AAA domain IstB_IS21 PF01695.17 RKO87077.1 - 0.026 14.3 0.0 0.035 13.8 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein NACHT PF05729.12 RKO87077.1 - 0.033 14.1 0.0 0.18 11.7 0.0 2.0 1 1 0 1 1 1 0 NACHT domain AAA_24 PF13479.6 RKO87077.1 - 0.06 13.1 0.0 0.15 11.7 0.0 1.6 2 1 0 2 2 2 0 AAA domain AAA_lid_3 PF17862.1 RKO87077.1 - 0.09 12.6 0.1 0.28 11.0 0.1 1.8 1 0 0 1 1 1 0 AAA+ lid domain TIP49 PF06068.13 RKO87077.1 - 0.093 11.9 0.0 0.14 11.3 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_18 PF13238.6 RKO87077.1 - 0.11 13.1 0.0 0.16 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 RKO87077.1 - 0.12 11.6 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_28 PF13521.6 RKO87077.1 - 0.12 12.6 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain Helicase_C PF00271.31 RKO87078.1 - 2.8e-16 59.8 0.0 7.3e-16 58.5 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HA2 PF04408.23 RKO87078.1 - 2.1e-15 56.9 0.0 6.1e-15 55.4 0.0 1.9 1 0 0 1 1 1 1 Helicase associated domain (HA2) RWD PF05773.22 RKO87078.1 - 1.1e-12 48.2 0.0 2.5e-12 47.1 0.0 1.6 1 0 0 1 1 1 1 RWD domain DEAD PF00270.29 RKO87078.1 - 4e-10 39.7 0.2 6.6e-10 39.0 0.2 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase UBA PF00627.31 RKO87078.1 - 1e-06 28.5 0.7 0.0019 18.1 0.2 2.7 2 0 0 2 2 2 2 UBA/TS-N domain DND1_DSRM PF14709.7 RKO87078.1 - 0.00038 20.7 0.0 0.0011 19.1 0.0 1.9 1 0 0 1 1 1 1 double strand RNA binding domain from DEAD END PROTEIN 1 AAA_19 PF13245.6 RKO87078.1 - 0.0044 17.4 0.1 0.01 16.2 0.1 1.6 1 0 0 1 1 1 1 AAA domain Helicase_RecD PF05127.14 RKO87078.1 - 0.0094 15.8 0.0 0.021 14.7 0.0 1.6 1 0 0 1 1 1 1 Helicase AAA_22 PF13401.6 RKO87078.1 - 0.0097 16.2 0.1 0.035 14.4 0.1 1.9 1 0 0 1 1 1 1 AAA domain FtsK_SpoIIIE PF01580.18 RKO87078.1 - 0.025 13.9 0.0 0.058 12.7 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family GETHR PF05671.11 RKO87078.1 - 0.032 13.6 3.1 1.6 8.2 0.2 2.6 2 0 0 2 2 2 0 GETHR pentapeptide repeat (5 copies) RsgA_GTPase PF03193.16 RKO87078.1 - 0.052 13.4 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase T2SSE PF00437.20 RKO87078.1 - 0.06 12.4 0.0 0.13 11.3 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein ATPase PF06745.13 RKO87078.1 - 0.082 12.2 0.0 0.2 11.0 0.0 1.6 1 0 0 1 1 1 0 KaiC DUF1421 PF07223.11 RKO87078.1 - 0.18 11.6 0.2 0.6 10.0 0.1 1.9 2 0 0 2 2 1 0 UBA-like domain (DUF1421) Rad17 PF03215.15 RKO87078.1 - 0.21 11.5 0.0 0.49 10.3 0.0 1.6 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_7 PF12775.7 RKO87078.1 - 0.22 11.0 0.0 0.45 10.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Usp PF00582.26 RKO87078.1 - 0.48 10.9 2.8 14 6.2 0.1 3.1 3 0 0 3 3 3 0 Universal stress protein family Integrase_H2C2 PF17921.1 RKO87080.1 - 1.6e-08 34.5 0.0 2.7e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 Integrase zinc binding domain HhH-GPD PF00730.25 RKO87081.1 - 3e-21 75.9 0.0 5e-21 75.2 0.0 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein EndIII_4Fe-2S PF10576.9 RKO87081.1 - 0.0001 22.6 4.2 0.0001 22.6 4.2 2.7 3 0 0 3 3 3 1 Iron-sulfur binding domain of endonuclease III HHH PF00633.23 RKO87081.1 - 0.012 15.4 0.9 0.03 14.2 0.4 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix motif CENP-M PF11111.8 RKO87082.1 - 0.072 12.3 0.2 0.62 9.2 0.0 2.1 1 1 1 2 2 2 0 Centromere protein M (CENP-M) VIR_N PF15912.5 RKO87082.1 - 1.3 8.6 8.5 1.3 8.6 8.5 1.2 1 0 0 1 1 1 0 Virilizer, N-terminal DctP PF03480.13 RKO87082.1 - 1.9 7.8 7.7 0.56 9.5 5.0 1.4 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein, family 7 CDC45 PF02724.14 RKO87082.1 - 2.1 6.5 14.5 2 6.6 14.5 1.1 1 0 0 1 1 1 0 CDC45-like protein DUF2052 PF09747.9 RKO87082.1 - 4.3 7.4 21.9 6.7 6.8 21.9 1.3 1 0 0 1 1 1 0 Coiled-coil domain containing protein (DUF2052) RR_TM4-6 PF06459.12 RKO87082.1 - 5.2 6.8 16.9 5.6 6.7 16.9 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 NPR3 PF03666.13 RKO87082.1 - 7.2 5.3 11.7 10 4.8 11.7 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 XRN_N PF03159.18 RKO87083.1 - 7.1e-06 25.6 0.0 0.022 14.2 0.0 2.2 1 1 1 2 2 2 2 XRN 5'-3' exonuclease N-terminus HSP70 PF00012.20 RKO87084.1 - 7.9e-48 163.0 0.0 8.8e-48 162.9 0.0 1.1 1 0 0 1 1 1 1 Hsp70 protein FGGY_C PF02782.16 RKO87084.1 - 0.045 13.5 0.0 0.071 12.8 0.0 1.3 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain HSP70 PF00012.20 RKO87085.1 - 2.7e-75 253.8 0.0 3e-75 253.6 0.0 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 RKO87085.1 - 0.015 14.1 0.0 0.12 11.2 0.0 1.9 2 0 0 2 2 2 0 MreB/Mbl protein DAO PF01266.24 RKO87086.1 - 5.8e-53 180.7 0.1 6.6e-53 180.5 0.1 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 RKO87086.1 - 0.00019 21.6 0.1 0.0004 20.5 0.1 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 RKO87086.1 - 0.00024 20.4 0.0 0.0011 18.3 0.0 2.0 2 0 0 2 2 2 1 Thi4 family GMC_oxred_N PF00732.19 RKO87086.1 - 0.0013 18.2 0.0 0.0021 17.5 0.0 1.3 1 0 0 1 1 1 1 GMC oxidoreductase Lycopene_cycl PF05834.12 RKO87086.1 - 0.0085 15.2 0.2 1.2 8.2 0.0 2.5 2 1 1 3 3 3 2 Lycopene cyclase protein Pyr_redox_3 PF13738.6 RKO87086.1 - 0.026 13.8 0.0 0.18 11.0 0.0 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Sacchrp_dh_NADP PF03435.18 RKO87086.1 - 0.065 13.5 0.2 3 8.1 0.0 2.3 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_9 PF13454.6 RKO87086.1 - 0.08 12.9 0.4 1.4 8.9 0.1 2.2 2 0 0 2 2 2 0 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 RKO87086.1 - 0.1 11.7 0.7 0.3 10.1 0.7 1.7 1 1 0 1 1 1 0 FAD binding domain K_oxygenase PF13434.6 RKO87086.1 - 0.2 10.8 0.1 0.76 8.8 0.0 1.8 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Guanylate_cyc PF00211.20 RKO87087.1 - 1.2e-08 34.8 0.0 1.3e-08 34.7 0.0 1.0 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain EMG1 PF03587.14 RKO87088.1 - 6.2e-79 264.2 0.1 7.7e-79 263.9 0.1 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase WD40 PF00400.32 RKO87089.1 - 7.4e-21 74.1 2.0 3.2e-05 24.6 0.3 5.3 6 0 0 6 6 6 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO87089.1 - 8.8e-06 25.9 0.0 1.3 9.4 0.0 4.3 2 2 3 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain BBS2_Mid PF14783.6 RKO87089.1 - 0.0044 17.1 0.0 1.1 9.3 0.0 3.2 3 1 1 4 4 4 1 Ciliary BBSome complex subunit 2, middle region HPS3_N PF14761.6 RKO87089.1 - 0.0055 16.3 0.0 1.4 8.4 0.0 2.9 1 1 1 3 3 3 1 Hermansky-Pudlak syndrome 3 PQQ_3 PF13570.6 RKO87089.1 - 0.032 14.7 0.0 63 4.2 0.0 4.1 4 0 0 4 4 4 0 PQQ-like domain Marek_SORF3 PF07153.11 RKO87089.1 - 0.051 12.9 0.0 0.069 12.5 0.0 1.4 1 0 0 1 1 1 0 Marek's disease-like virus SORF3 protein DUF4686 PF15742.5 RKO87090.1 - 0.0045 16.2 4.5 0.005 16.0 4.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4686) LKAAEAR PF15478.6 RKO87090.1 - 0.011 16.0 3.3 0.011 16.0 3.3 1.8 1 1 1 2 2 2 0 Family of unknown function with LKAAEAR motif ZapB PF06005.12 RKO87090.1 - 0.02 15.3 4.9 0.02 15.3 4.9 1.7 2 0 0 2 2 2 0 Cell division protein ZapB YvrJ PF12841.7 RKO87090.1 - 0.31 10.6 0.9 3.5 7.2 0.0 2.3 2 0 0 2 2 2 0 YvrJ protein family UPF0121 PF03661.13 RKO87095.1 - 4.1e-54 183.5 9.6 5.5e-54 183.1 9.6 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0121) NTP_transf_2 PF01909.23 RKO87096.1 - 0.00024 21.3 0.0 0.00039 20.7 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyltransferase domain LRR_4 PF12799.7 RKO87097.1 - 0.0009 19.6 0.6 12 6.5 0.0 4.3 4 1 0 4 4 4 2 Leucine Rich repeats (2 copies) UBM PF14377.6 RKO87097.1 - 0.072 12.6 0.2 11 5.6 0.3 3.5 3 0 0 3 3 3 0 Ubiquitin binding region Crp PF00325.20 RKO87097.1 - 0.084 12.6 0.0 0.2 11.3 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family CBF PF03914.17 RKO87098.1 - 9.9e-26 90.8 0.1 2e-25 89.8 0.1 1.5 1 0 0 1 1 1 1 CBF/Mak21 family RNA_pol_Rpb2_1 PF04563.15 RKO87100.1 - 1.3e-55 188.0 0.1 1.8e-55 187.6 0.1 1.2 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_1 PF04563.15 RKO87102.1 - 7.7e-11 41.9 0.0 8e-11 41.8 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase beta subunit PS_Dcarbxylase PF02666.15 RKO87108.1 - 8.8e-45 152.7 0.0 9.2e-43 146.1 0.0 2.0 1 1 0 1 1 1 1 Phosphatidylserine decarboxylase DUF2046 PF09755.9 RKO87109.1 - 0.029 13.6 0.0 0.033 13.4 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein H4 (DUF2046) IBR PF01485.21 RKO87110.1 - 4.6e-06 26.8 0.6 4.6e-06 26.8 0.6 3.3 2 1 1 3 3 3 2 IBR domain, a half RING-finger domain zf-C3HC4_2 PF13923.6 RKO87110.1 - 0.012 15.5 0.8 0.032 14.1 0.8 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 RKO87110.1 - 0.015 15.6 2.4 0.015 15.6 2.4 2.4 2 1 0 2 2 2 0 Ring finger domain zf-RING_UBOX PF13445.6 RKO87110.1 - 0.026 14.5 0.7 0.076 13.0 0.7 1.9 1 0 0 1 1 1 0 RING-type zinc-finger SDA1 PF05285.12 RKO87110.1 - 0.071 12.5 2.9 0.095 12.1 2.9 1.1 1 0 0 1 1 1 0 SDA1 zf-Nse PF11789.8 RKO87110.1 - 0.13 12.1 1.3 0.47 10.3 0.3 2.4 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit zf-RAG1 PF10426.9 RKO87110.1 - 0.72 10.0 4.2 4.8 7.4 0.4 2.7 2 0 0 2 2 2 0 Recombination-activating protein 1 zinc-finger domain Nop14 PF04147.12 RKO87110.1 - 3.3 5.8 9.1 4.3 5.4 9.1 1.1 1 0 0 1 1 1 0 Nop14-like family WD40 PF00400.32 RKO87112.1 - 2.3e-26 91.5 19.6 1.6e-07 31.9 0.3 5.7 6 0 0 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO87112.1 - 1.5e-13 50.8 1.3 0.0023 18.2 0.1 4.0 1 1 3 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 RKO87112.1 - 6e-09 35.7 0.0 0.00081 18.8 0.0 2.7 3 0 0 3 3 3 2 WD40-like domain PQQ_3 PF13570.6 RKO87112.1 - 0.03 14.8 6.2 14 6.3 0.3 4.5 3 2 1 4 4 4 0 PQQ-like domain Frtz PF11768.8 RKO87112.1 - 0.13 10.5 0.0 0.87 7.8 0.0 2.0 1 1 1 2 2 2 0 WD repeat-containing and planar cell polarity effector protein Fritz ATP-grasp_2 PF08442.10 RKO87113.1 - 1.1e-73 247.1 2.8 1.9e-73 246.3 2.8 1.4 1 0 0 1 1 1 1 ATP-grasp domain Ligase_CoA PF00549.19 RKO87113.1 - 2.6e-27 95.5 0.2 5e-27 94.6 0.2 1.5 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 RKO87113.1 - 1.5e-05 24.6 0.7 2.5e-05 23.8 0.7 1.3 1 0 0 1 1 1 1 ATP-grasp domain OKR_DC_1_N PF03709.15 RKO87113.1 - 0.0042 17.4 0.0 0.032 14.5 0.0 2.4 1 1 1 2 2 2 1 Orn/Lys/Arg decarboxylase, N-terminal domain GARS_A PF01071.19 RKO87113.1 - 0.034 13.9 0.3 0.094 12.5 0.3 1.9 1 1 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PASTA PF03793.19 RKO87113.1 - 0.14 12.1 0.5 10 6.1 0.1 3.1 3 0 0 3 3 3 0 PASTA domain DUF61 PF01886.16 RKO87114.1 - 0.058 13.4 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF61 Voltage_CLC PF00654.20 RKO87115.1 - 5.9e-26 91.6 0.8 5.9e-26 91.6 0.8 2.5 2 1 1 3 3 3 1 Voltage gated chloride channel HSP70 PF00012.20 RKO87117.1 - 3.4e-118 395.4 0.4 3.9e-118 395.2 0.4 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 RKO87117.1 - 1.8e-09 36.9 0.0 2.9e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 MreB/Mbl protein PEMT PF04191.13 RKO87118.1 - 1.7e-49 166.6 12.2 1.5e-26 92.8 3.3 2.7 2 0 0 2 2 2 2 Phospholipid methyltransferase Fic PF02661.18 RKO87119.1 - 1.1e-14 55.1 0.0 2.5e-14 53.9 0.0 1.6 1 0 0 1 1 1 1 Fic/DOC family PHD PF00628.29 RKO87120.1 - 9.6e-12 44.6 5.4 1.1e-11 44.5 5.4 1.0 1 0 0 1 1 1 1 PHD-finger zf-RING_2 PF13639.6 RKO87120.1 - 0.0089 16.3 5.5 0.013 15.8 5.5 1.2 1 0 0 1 1 1 1 Ring finger domain C1_1 PF00130.22 RKO87120.1 - 0.0097 15.8 0.6 0.0097 15.8 0.6 1.4 1 1 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) PHD_4 PF16866.5 RKO87120.1 - 0.019 15.1 4.3 0.028 14.5 4.3 1.4 1 1 0 1 1 1 0 PHD-finger Terminase_GpA PF05876.12 RKO87120.1 - 1.6 7.2 4.2 1.7 7.1 4.2 1.0 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) C4bp_oligo PF18453.1 RKO87123.1 - 0.012 15.8 0.5 0.033 14.4 0.5 1.8 1 0 0 1 1 1 0 Oligomerization domain of C4b-binding protein alpha Ribonuc_red_lgC PF02867.15 RKO87124.1 - 4.7e-149 497.3 0.0 6.4e-149 496.8 0.0 1.2 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 RKO87124.1 - 1.3e-24 85.9 0.0 3.1e-24 84.8 0.0 1.7 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 RKO87124.1 - 6e-06 26.7 0.0 1.5e-05 25.4 0.0 1.7 1 0 0 1 1 1 1 ATP cone domain Ly-6_related PF06579.12 RKO87124.1 - 0.097 12.9 0.2 0.21 11.8 0.2 1.5 1 0 0 1 1 1 0 Caenorhabditis elegans ly-6-related protein XPA_C PF05181.12 RKO87125.1 - 0.008 16.1 0.1 0.041 13.9 0.1 2.2 2 0 0 2 2 2 1 XPA protein C-terminus Ank_5 PF13857.6 RKO87128.1 - 1.3e-05 25.4 1.4 0.017 15.4 0.1 3.1 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO87128.1 - 0.0003 21.3 0.2 0.0048 17.4 0.0 2.3 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO87128.1 - 0.018 15.5 0.5 13 6.7 0.0 3.6 3 0 0 3 3 3 0 Ankyrin repeat CDV3 PF15359.6 RKO87129.1 - 1.9 9.0 6.7 0.41 11.1 2.6 1.9 2 0 0 2 2 2 0 Carnitine deficiency-associated protein 3 ATG16 PF08614.11 RKO87129.1 - 2.9 8.0 30.8 45 4.2 0.1 2.9 2 1 0 2 2 2 0 Autophagy protein 16 (ATG16) Csm2_III-A PF03750.13 RKO87129.1 - 4.2 8.3 9.9 0.44 11.4 4.1 2.3 2 1 1 3 3 3 0 Csm2 Type III-A BBS2_C PF14782.6 RKO87129.1 - 4.6 5.9 11.5 0.14 10.9 4.4 1.8 2 0 0 2 2 2 0 Ciliary BBSome complex subunit 2, C-terminal Glyco_hydro_15 PF00723.21 RKO87131.1 - 3e-83 280.1 0.3 3.4e-83 279.9 0.3 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 15 Ank_2 PF12796.7 RKO87132.1 - 5.5e-10 39.7 5.7 0.0033 18.0 0.1 3.8 3 0 0 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO87132.1 - 0.002 18.6 7.8 7.1 7.3 0.1 5.3 4 3 1 5 5 5 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO87132.1 - 0.094 13.1 8.9 11 6.4 0.0 6.3 5 3 3 8 8 8 0 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO87132.1 - 0.56 10.9 10.6 51 4.9 0.0 5.9 7 0 0 7 7 7 0 Ankyrin repeat Glyco_hydro_28 PF00295.17 RKO87136.1 - 5.2e-30 104.6 9.4 2.7e-28 99.0 9.4 2.0 1 1 0 1 1 1 1 Glycosyl hydrolases family 28 MS_channel PF00924.18 RKO87136.1 - 0.23 11.0 2.0 0.63 9.5 2.0 1.8 1 1 0 1 1 1 0 Mechanosensitive ion channel DUF3759 PF12585.8 RKO87138.1 - 0.035 14.1 0.0 0.065 13.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3759) DoxX PF07681.12 RKO87139.1 - 0.042 14.4 0.0 0.1 13.2 0.0 1.6 1 0 0 1 1 1 0 DoxX Oxidored_FMN PF00724.20 RKO87140.1 - 2.5e-40 138.8 0.0 3.1e-40 138.5 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family Evr1_Alr PF04777.13 RKO87142.1 - 1.6e-28 99.1 0.2 1.8e-28 98.9 0.2 1.0 1 0 0 1 1 1 1 Erv1 / Alr family TPR_14 PF13428.6 RKO87143.1 - 0.34 11.8 1.8 0.69 10.9 0.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF3328 PF11807.8 RKO87144.1 - 3.9e-20 72.6 4.2 7.4e-20 71.7 4.2 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF3328) OSTMP1 PF09777.9 RKO87144.1 - 0.054 12.9 0.0 0.07 12.5 0.0 1.1 1 0 0 1 1 1 0 Osteopetrosis-associated transmembrane protein 1 precursor DUF1501 PF07394.12 RKO87144.1 - 0.15 11.1 0.3 0.29 10.1 0.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1501) Ank_2 PF12796.7 RKO87146.1 - 0.00048 20.6 0.0 0.00081 19.9 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO87146.1 - 0.064 13.6 0.0 9.6 6.7 0.0 2.7 2 0 0 2 2 2 0 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO87146.1 - 0.14 12.7 0.1 0.41 11.3 0.1 1.8 1 0 0 1 1 1 0 Ankyrin repeats (many copies) DUF1891 PF09004.10 RKO87146.1 - 0.17 11.5 0.1 0.17 11.5 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1891) HNH_3 PF13392.6 RKO87147.1 - 0.00022 20.9 0.4 0.00043 20.0 0.4 1.5 1 0 0 1 1 1 1 HNH endonuclease ACI44 PF15270.6 RKO87147.1 - 0.097 12.9 0.1 0.9 9.8 0.1 2.5 2 0 0 2 2 2 0 Metallo-carboxypeptidase inhibitor Ndc1_Nup PF09531.10 RKO87148.1 - 1.8 7.2 4.1 1.7 7.2 4.1 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup zf-MYND PF01753.18 RKO87149.1 - 2e-11 43.8 11.0 3.7e-11 42.9 11.0 1.5 1 0 0 1 1 1 1 MYND finger DUF1769 PF08588.10 RKO87151.1 - 3.1e-21 75.3 0.4 5.6e-21 74.5 0.4 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1769) DUF5559 PF17714.1 RKO87152.1 - 3.2 7.6 10.0 0.41 10.5 5.7 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5559) zf_CCCH_4 PF18345.1 RKO87154.1 - 3.4e-08 33.3 23.1 3.4e-05 23.7 3.2 4.2 3 1 0 3 3 3 3 Zinc finger domain Torus PF16131.5 RKO87154.1 - 1.1e-05 26.1 6.7 0.00016 22.3 0.3 4.1 3 1 2 5 5 5 2 Torus domain zf-CCCH_4 PF18044.1 RKO87154.1 - 4.7e-05 23.1 0.6 4.7e-05 23.1 0.6 3.9 3 1 0 3 3 3 2 CCCH-type zinc finger zf-CCCH PF00642.24 RKO87154.1 - 0.00039 20.3 24.7 0.00059 19.7 1.0 3.8 3 1 0 3 3 3 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_3 PF15663.5 RKO87154.1 - 4.7 7.5 17.0 5.5 7.2 13.6 2.4 2 1 0 2 2 2 0 Zinc-finger containing family SH3_1 PF00018.28 RKO87156.1 - 1.5e-05 24.5 0.0 2.5e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 SH3 domain SKG6 PF08693.10 RKO87156.1 - 0.005 16.2 4.5 0.005 16.2 4.5 2.0 2 0 0 2 2 2 1 Transmembrane alpha-helix domain SH3_9 PF14604.6 RKO87156.1 - 0.054 13.4 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 Variant SH3 domain Amnionless PF14828.6 RKO87156.1 - 0.27 10.0 0.0 0.38 9.5 0.0 1.1 1 0 0 1 1 1 0 Amnionless NICE-1 PF15845.5 RKO87156.1 - 0.95 10.3 8.5 0.84 10.5 0.3 2.6 2 1 0 2 2 2 0 Cysteine-rich C-terminal 1 family HMG_box PF00505.19 RKO87158.1 - 6.2e-14 52.2 10.9 1.1e-10 41.7 2.5 3.2 2 1 0 2 2 2 2 HMG (high mobility group) box HMG_box_2 PF09011.10 RKO87158.1 - 5.9e-07 30.0 9.2 1.5e-06 28.7 2.0 3.0 2 1 0 2 2 2 2 HMG-box domain UEV PF05743.13 RKO87159.1 - 9.6e-36 122.3 0.2 1.1e-35 122.1 0.2 1.0 1 0 0 1 1 1 1 UEV domain UQ_con PF00179.26 RKO87159.1 - 0.061 13.0 0.1 0.066 12.9 0.1 1.1 1 0 0 1 1 1 0 Ubiquitin-conjugating enzyme UbiA PF01040.18 RKO87160.1 - 1e-09 38.1 0.0 1.3e-09 37.8 0.0 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family ABG_transport PF03806.13 RKO87161.1 - 0.12 10.6 0.1 0.18 10.0 0.1 1.1 1 0 0 1 1 1 0 AbgT putative transporter family HHV-5_US34A PF17087.5 RKO87162.1 - 0.0027 17.8 0.4 0.015 15.4 0.0 2.0 2 0 0 2 2 2 1 Herpesvirus US34A protein family EF-hand_7 PF13499.6 RKO87162.1 - 0.0071 16.8 0.6 0.25 11.8 0.6 2.4 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 RKO87162.1 - 0.034 13.7 0.7 0.27 10.9 0.2 2.8 3 1 0 3 3 3 0 EF hand EF-hand_6 PF13405.6 RKO87162.1 - 0.07 13.1 0.8 1.9 8.6 0.1 3.0 2 1 0 2 2 2 0 EF-hand domain EF-hand_5 PF13202.6 RKO87162.1 - 0.087 12.4 0.7 0.21 11.2 0.2 1.9 2 0 0 2 2 2 0 EF hand Arc_PepC PF06819.11 RKO87162.1 - 0.12 12.5 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Archaeal Peptidase A24 C-terminal Domain Secretin_N PF03958.17 RKO87163.1 - 7.6 7.0 8.1 6 7.3 4.8 2.3 2 1 0 2 2 2 0 Bacterial type II/III secretion system short domain SWIRM PF04433.17 RKO87164.1 - 0.00022 21.5 0.0 0.00033 20.9 0.0 1.2 1 0 0 1 1 1 1 SWIRM domain cwf21 PF08312.12 RKO87167.1 - 6.3e-16 58.2 4.9 1e-15 57.6 4.9 1.4 1 0 0 1 1 1 1 cwf21 domain UDG PF03167.19 RKO87168.1 - 2.1e-18 66.8 0.0 2.4e-18 66.6 0.0 1.0 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily G_path_suppress PF15991.5 RKO87169.1 - 0.54 10.4 1.9 0.68 10.0 1.9 1.2 1 0 0 1 1 1 0 G-protein pathway suppressor DUF4611 PF15387.6 RKO87170.1 - 0.083 13.1 0.3 0.18 12.0 0.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) Trp_syntA PF00290.20 RKO87171.1 - 1.3e-86 289.7 0.1 2e-86 289.0 0.1 1.3 1 0 0 1 1 1 1 Tryptophan synthase alpha chain PALP PF00291.25 RKO87171.1 - 3.4e-45 154.7 1.1 5.8e-45 154.0 0.3 1.8 2 0 0 2 2 2 1 Pyridoxal-phosphate dependent enzyme His_biosynth PF00977.21 RKO87171.1 - 0.043 13.3 0.2 0.097 12.1 0.2 1.5 1 0 0 1 1 1 0 Histidine biosynthesis protein VapB_antitoxin PF09957.9 RKO87171.1 - 0.053 13.4 0.0 3.1 7.8 0.0 2.5 2 0 0 2 2 2 0 Bacterial antitoxin of type II TA system, VapB Pex24p PF06398.11 RKO87172.1 - 6.1e-14 51.8 7.5 6.1e-14 51.8 7.5 2.3 3 0 0 3 3 3 2 Integral peroxisomal membrane peroxin GATA PF00320.27 RKO87173.1 - 4.7e-14 51.7 4.4 6.8e-14 51.2 4.4 1.3 1 0 0 1 1 1 1 GATA zinc finger Auto_anti-p27 PF06677.12 RKO87173.1 - 0.0049 17.0 0.6 0.0083 16.3 0.6 1.4 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TF_Zn_Ribbon PF08271.12 RKO87173.1 - 0.22 11.1 2.1 0.37 10.3 2.1 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding T-box PF00907.22 RKO87174.1 - 1.3e-39 136.4 0.1 1.1e-38 133.3 0.0 2.1 2 0 0 2 2 2 1 T-box STIMATE PF12400.8 RKO87175.1 - 3.5e-37 127.7 4.8 5.2e-37 127.2 4.8 1.3 1 0 0 1 1 1 1 STIMATE family Adaptin_N PF01602.20 RKO87176.1 - 2.4e-51 174.9 0.2 2.8e-51 174.7 0.2 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 RKO87176.1 - 1.5e-10 41.4 0.0 2.1e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 RKO87176.1 - 7.7e-08 32.6 0.0 0.0014 19.0 0.0 2.0 1 1 1 2 2 2 2 HEAT repeats HEAT PF02985.22 RKO87176.1 - 3e-05 23.9 0.0 0.016 15.4 0.0 2.8 2 0 0 2 2 2 2 HEAT repeat RTP1_C1 PF10363.9 RKO87176.1 - 0.02 15.1 0.1 0.1 12.8 0.0 2.0 1 1 1 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 RasGEF_N_2 PF14663.6 RKO87176.1 - 0.061 13.7 0.0 0.26 11.7 0.0 1.9 1 1 1 2 2 2 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain DUF4888 PF16229.5 RKO87177.1 - 0.032 14.2 0.0 0.07 13.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4888) CLASP_N PF12348.8 RKO87178.1 - 6e-13 48.9 0.0 7.3e-13 48.6 0.0 1.0 1 0 0 1 1 1 1 CLASP N terminal NUC173 PF08161.12 RKO87178.1 - 0.00067 19.4 0.0 0.00091 18.9 0.0 1.2 1 0 0 1 1 1 1 NUC173 domain HEAT PF02985.22 RKO87178.1 - 0.017 15.4 0.2 10 6.7 0.0 3.2 3 0 0 3 3 3 0 HEAT repeat HEAT_2 PF13646.6 RKO87178.1 - 0.02 15.3 0.1 0.037 14.4 0.0 1.5 2 0 0 2 2 2 0 HEAT repeats DRIM PF07539.12 RKO87178.1 - 0.061 11.6 0.0 0.072 11.4 0.0 1.0 1 0 0 1 1 1 0 Down-regulated in metastasis PUF PF00806.19 RKO87180.1 - 1.2e-26 90.8 0.1 5.3e-05 22.7 0.0 6.4 6 0 0 6 6 6 5 Pumilio-family RNA binding repeat PAP_central PF04928.17 RKO87181.1 - 1.4e-113 378.0 0.0 1.8e-113 377.6 0.0 1.1 1 0 0 1 1 1 1 Poly(A) polymerase central domain PAP_RNA-bind PF04926.15 RKO87181.1 - 1.4e-43 148.5 0.0 3.2e-43 147.3 0.0 1.6 1 0 0 1 1 1 1 Poly(A) polymerase predicted RNA binding domain NTP_transf_2 PF01909.23 RKO87181.1 - 9.5e-13 48.3 0.0 2.8e-12 46.8 0.0 1.8 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 RKO87181.1 - 0.024 14.7 0.0 0.093 12.8 0.0 1.8 1 1 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase Nrap_D2 PF17403.2 RKO87181.1 - 0.034 13.9 0.6 0.07 12.9 0.1 1.8 2 0 0 2 2 2 0 Nrap protein PAP/OAS-like domain HMG_box PF00505.19 RKO87182.1 - 5.9e-12 45.8 0.2 1.2e-11 44.9 0.2 1.5 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 RKO87182.1 - 5.6e-06 26.8 0.1 1.3e-05 25.7 0.1 1.6 1 0 0 1 1 1 1 HMG-box domain AIRC PF00731.20 RKO87183.1 - 0.063 12.9 0.0 0.15 11.6 0.0 1.5 1 0 0 1 1 1 0 AIR carboxylase RdRP PF05183.12 RKO87185.1 - 2.2e-61 208.2 0.4 2.1e-40 139.0 0.1 2.0 1 1 1 2 2 2 2 RNA dependent RNA polymerase Piwi PF02171.17 RKO87186.1 - 1.7e-99 332.9 0.1 2.3e-99 332.5 0.1 1.2 1 0 0 1 1 1 1 Piwi domain ArgoN PF16486.5 RKO87186.1 - 1.1e-27 97.3 0.0 2.8e-27 96.0 0.0 1.7 1 0 0 1 1 1 1 N-terminal domain of argonaute PAZ PF02170.22 RKO87186.1 - 9.2e-21 74.1 0.0 1.6e-20 73.3 0.0 1.3 1 0 0 1 1 1 1 PAZ domain ArgoL1 PF08699.10 RKO87186.1 - 1.3e-17 63.2 0.0 2.9e-17 62.1 0.0 1.6 1 0 0 1 1 1 1 Argonaute linker 1 domain ArgoL2 PF16488.5 RKO87186.1 - 3e-10 40.3 0.0 8.5e-10 38.8 0.0 1.8 1 0 0 1 1 1 1 Argonaute linker 2 domain ArgoMid PF16487.5 RKO87186.1 - 1.6e-08 34.7 0.0 4.9e-08 33.1 0.0 1.8 1 0 0 1 1 1 1 Mid domain of argonaute Rrf2 PF02082.20 RKO87186.1 - 0.17 12.3 0.0 20 5.6 0.1 2.5 2 0 0 2 2 2 0 Transcriptional regulator TPR_14 PF13428.6 RKO87187.1 - 7.4e-10 38.8 2.6 0.053 14.4 0.0 5.1 3 3 2 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.17 RKO87187.1 - 2.5e-08 33.4 0.0 0.016 15.3 0.0 4.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 RKO87187.1 - 1.5e-07 30.9 0.0 0.012 15.4 0.0 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO87187.1 - 6.2e-07 30.0 0.6 0.67 10.6 0.0 5.9 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_11 PF13414.6 RKO87187.1 - 1.6e-06 27.7 0.0 0.044 13.5 0.0 3.5 2 1 1 3 3 3 2 TPR repeat TPR_12 PF13424.6 RKO87187.1 - 2.8e-05 24.3 1.3 0.37 11.1 0.0 4.6 3 2 1 4 4 4 1 Tetratricopeptide repeat TPR_7 PF13176.6 RKO87187.1 - 3.9e-05 23.4 2.4 0.63 10.2 0.0 5.3 4 1 0 4 4 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 RKO87187.1 - 0.0083 16.4 0.2 15 6.2 0.0 4.1 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 RKO87187.1 - 0.017 15.6 0.0 6.4 7.4 0.0 3.5 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 RKO87187.1 - 0.025 15.2 0.2 20 6.1 0.0 4.6 4 1 0 4 4 4 0 Tetratricopeptide repeat TPR_10 PF13374.6 RKO87187.1 - 0.18 11.7 0.8 2 8.4 0.0 3.1 3 1 1 4 4 4 0 Tetratricopeptide repeat ELFV_dehydrog PF00208.21 RKO87189.1 - 3.2e-57 194.0 0.0 5.1e-57 193.4 0.0 1.3 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Bac_GDH PF05088.12 RKO87189.1 - 5.6e-22 77.2 0.0 4.5e-14 51.0 0.0 2.1 2 0 0 2 2 2 2 Bacterial NAD-glutamate dehydrogenase ELFV_dehydrog_N PF02812.18 RKO87189.1 - 0.19 11.6 0.0 0.68 9.8 0.0 1.9 2 0 0 2 2 2 0 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Pkinase PF00069.25 RKO87190.1 - 2.4e-47 161.5 0.0 2.7e-47 161.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO87190.1 - 2e-21 76.5 0.0 2.4e-21 76.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO87190.1 - 2.3e-05 24.5 0.0 2.9e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 RKO87190.1 - 0.0051 16.4 0.2 0.011 15.3 0.1 1.5 1 1 1 2 2 2 1 RIO1 family Kdo PF06293.14 RKO87190.1 - 0.022 14.1 0.1 0.03 13.7 0.1 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 RKO87190.1 - 0.068 12.7 0.1 0.1 12.2 0.1 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase Pkinase_fungal PF17667.1 RKO87190.1 - 0.14 10.9 0.1 0.17 10.6 0.1 1.1 1 0 0 1 1 1 0 Fungal protein kinase Phage_T7_tail PF03906.14 RKO87192.1 - 0.0036 17.0 0.3 0.021 14.5 0.0 2.5 2 1 1 3 3 3 1 Phage T7 tail fibre protein Bactofilin PF04519.13 RKO87192.1 - 0.67 10.3 15.2 0.24 11.7 0.6 5.2 5 0 0 5 5 5 0 Polymer-forming cytoskeletal FAM72 PF14976.6 RKO87193.1 - 9.7e-47 158.8 8.2 1.1e-46 158.6 8.2 1.0 1 0 0 1 1 1 1 FAM72 protein Methyltransf_25 PF13649.6 RKO87195.1 - 1e-06 29.3 0.0 1.5e-06 28.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO87195.1 - 1.3e-06 28.3 0.0 2e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 RKO87195.1 - 3.7e-06 27.5 0.0 6.1e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 RKO87195.1 - 0.00016 21.6 0.0 0.00025 20.9 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 RKO87195.1 - 0.00059 20.5 0.0 0.00097 19.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CheR PF01739.18 RKO87195.1 - 0.006 16.1 0.0 0.012 15.1 0.0 1.5 1 1 0 1 1 1 1 CheR methyltransferase, SAM binding domain DREV PF05219.12 RKO87195.1 - 0.03 13.4 0.0 0.036 13.2 0.0 1.1 1 0 0 1 1 1 0 DREV methyltransferase TehB PF03848.14 RKO87195.1 - 0.036 13.5 0.0 0.048 13.1 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB Methyltransf_7 PF03492.15 RKO87195.1 - 0.17 11.0 0.0 0.2 10.8 0.0 1.1 1 0 0 1 1 1 0 SAM dependent carboxyl methyltransferase UQ_con PF00179.26 RKO87196.1 - 7e-48 161.8 0.0 8e-48 161.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UEV PF05743.13 RKO87196.1 - 0.00028 20.7 0.0 0.00038 20.3 0.0 1.3 1 0 0 1 1 1 1 UEV domain RWD PF05773.22 RKO87196.1 - 0.0013 19.0 0.0 0.0027 18.0 0.0 1.4 1 1 0 1 1 1 1 RWD domain Prok-E2_B PF14461.6 RKO87196.1 - 0.091 12.5 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family B Ufd2P_core PF10408.9 RKO87198.1 - 1.1e-189 632.1 0.0 1.3e-189 631.8 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin elongating factor core COesterase PF00135.28 RKO87200.1 - 6.2e-29 101.2 0.4 6.7e-29 101.1 0.4 1.0 1 0 0 1 1 1 1 Carboxylesterase family Abhydrolase_3 PF07859.13 RKO87200.1 - 3.2e-06 27.2 0.1 0.0013 18.6 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold F-box-like PF12937.7 RKO87202.1 - 7.8e-09 35.3 0.8 2.2e-08 33.9 0.1 2.2 2 0 0 2 2 2 1 F-box-like F-box PF00646.33 RKO87202.1 - 0.026 14.4 0.1 0.12 12.3 0.0 2.2 2 0 0 2 2 2 0 F-box domain PGI PF00342.19 RKO87203.1 - 7.7e-156 519.5 0.3 8.6e-156 519.3 0.3 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase DUF4473 PF14747.6 RKO87203.1 - 0.14 12.7 0.0 0.32 11.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4473) RabGAP-TBC PF00566.18 RKO87204.1 - 1.1e-51 175.5 0.0 1.8e-51 174.9 0.0 1.3 1 0 0 1 1 1 1 Rab-GTPase-TBC domain EF-hand_6 PF13405.6 RKO87204.1 - 1.7e-06 27.5 0.3 0.1 12.6 0.1 3.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 RKO87204.1 - 2.9e-06 26.4 0.4 0.003 17.0 0.1 3.0 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 RKO87204.1 - 0.0003 20.2 1.0 0.13 11.8 0.1 2.9 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 RKO87204.1 - 0.00051 20.4 2.8 0.79 10.2 0.3 3.4 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 RKO87204.1 - 0.026 14.3 0.6 1.6 8.6 0.3 2.9 2 0 0 2 2 2 0 EF-hand domain pair Dynamin_M PF01031.20 RKO87205.1 - 2.3e-18 66.4 0.0 5.1e-18 65.3 0.0 1.5 2 0 0 2 2 2 1 Dynamin central region GED PF02212.18 RKO87205.1 - 2e-06 27.9 0.0 1e-05 25.6 0.0 2.1 2 0 0 2 2 2 1 Dynamin GTPase effector domain Dynamin_N PF00350.23 RKO87206.1 - 0.014 15.5 0.0 0.022 14.8 0.0 1.3 1 0 0 1 1 1 0 Dynamin family HA2 PF04408.23 RKO87207.1 - 0.00049 20.3 0.0 0.00092 19.5 0.0 1.4 1 0 0 1 1 1 1 Helicase associated domain (HA2) Calreticulin PF00262.18 RKO87210.1 - 1e-166 554.3 9.7 1.3e-166 554.1 9.7 1.1 1 0 0 1 1 1 1 Calreticulin family Cytochrom_B562 PF07361.11 RKO87210.1 - 0.0074 16.9 3.1 0.015 16.0 3.1 1.4 1 0 0 1 1 1 1 Cytochrome b562 LRR_8 PF13855.6 RKO87211.1 - 9e-08 31.8 6.1 0.00036 20.3 0.2 4.4 3 1 1 4 4 4 3 Leucine rich repeat LRR_4 PF12799.7 RKO87211.1 - 0.00024 21.4 10.4 0.012 16.0 0.4 3.8 2 1 0 2 2 2 1 Leucine Rich repeats (2 copies) DUF3634 PF12321.8 RKO87211.1 - 0.0047 17.3 0.1 0.016 15.5 0.0 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF3634) LRR_1 PF00560.33 RKO87211.1 - 0.0056 17.1 6.9 4.2 8.3 0.1 4.9 4 1 0 4 4 4 2 Leucine Rich Repeat Phage_Coat_A PF05357.13 RKO87212.1 - 0.078 12.8 1.4 8.3 6.3 0.0 2.7 3 0 0 3 3 3 0 Phage Coat Protein A Kelch_6 PF13964.6 RKO87213.1 - 0.022 15.0 0.1 0.13 12.6 0.0 2.1 2 0 0 2 2 2 0 Kelch motif SH3_9 PF14604.6 RKO87214.1 - 0.0045 16.8 0.0 0.0081 16.0 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO87214.1 - 0.017 14.7 0.0 0.025 14.2 0.0 1.3 1 0 0 1 1 1 0 SH3 domain HMA PF00403.26 RKO87215.1 - 5.4e-15 55.6 1.6 6.1e-15 55.4 1.6 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain Fer2_BFD PF04324.15 RKO87215.1 - 0.0076 16.6 0.2 0.14 12.6 0.1 2.2 2 0 0 2 2 2 1 BFD-like [2Fe-2S] binding domain Complex1_LYR PF05347.15 RKO87216.1 - 0.0012 18.8 1.8 0.0021 18.1 1.8 1.5 1 0 0 1 1 1 1 Complex 1 protein (LYR family) T3SSipB PF16535.5 RKO87216.1 - 0.015 15.8 0.0 0.019 15.5 0.0 1.1 1 0 0 1 1 1 0 Type III cell invasion protein SipB Sugar_tr PF00083.24 RKO87217.1 - 3e-77 260.4 19.6 1.5e-76 258.1 19.6 1.8 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 RKO87217.1 - 2.7e-23 82.5 15.9 3.5e-23 82.1 15.9 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Peptidase_S10 PF00450.22 RKO87219.1 - 6.1e-61 207.1 2.3 7.9e-61 206.7 2.3 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase CopK PF11525.8 RKO87220.1 - 0.092 12.4 0.0 0.64 9.7 0.0 2.0 2 0 0 2 2 2 0 Copper resistance protein K S36_mt PF10937.8 RKO87221.1 - 2e-10 42.2 0.4 4.7e-07 31.4 0.5 2.0 1 1 1 2 2 2 2 Ribosomal protein S36, mitochondrial Fasciclin PF02469.22 RKO87223.1 - 4.1e-11 43.2 0.0 1.4e-09 38.3 0.0 2.9 3 1 0 3 3 3 1 Fasciclin domain Kelch_4 PF13418.6 RKO87225.1 - 0.018 15.0 0.4 0.047 13.7 0.4 1.8 1 1 0 1 1 1 0 Galactose oxidase, central domain Kelch_2 PF07646.15 RKO87225.1 - 0.024 14.6 0.0 0.068 13.2 0.0 1.7 1 0 0 1 1 1 0 Kelch motif Kelch_3 PF13415.6 RKO87225.1 - 0.053 13.8 0.4 0.11 12.8 0.4 1.6 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO87225.1 - 0.11 12.1 1.1 1.1 8.9 0.1 2.5 2 0 0 2 2 2 0 Kelch motif PQQ_3 PF13570.6 RKO87225.1 - 7.5 7.2 8.0 88 3.8 5.2 3.2 2 1 0 2 2 2 0 PQQ-like domain Peptidase_S10 PF00450.22 RKO87226.1 - 1.2e-15 57.9 0.0 1.4e-15 57.6 0.0 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase LSM PF01423.22 RKO87227.1 - 6.5e-15 54.6 0.1 7.6e-15 54.4 0.1 1.1 1 0 0 1 1 1 1 LSM domain ALIX_LYPXL_bnd PF13949.6 RKO87228.1 - 1.2e-64 218.5 12.0 2.4e-64 217.5 12.0 1.5 1 0 0 1 1 1 1 ALIX V-shaped domain binding to HIV BRO1 PF03097.18 RKO87228.1 - 3.1e-45 154.6 0.5 7.6e-45 153.4 0.5 1.7 1 0 0 1 1 1 1 BRO1-like domain DUF349 PF03993.12 RKO87228.1 - 2.2 8.6 7.9 0.47 10.8 0.4 3.6 3 0 0 3 3 3 0 Domain of Unknown Function (DUF349) Cytochrom_B562 PF07361.11 RKO87228.1 - 3.7 8.3 7.1 1.4 9.6 2.3 2.7 2 1 0 2 2 2 0 Cytochrome b562 B-block_TFIIIC PF04182.12 RKO87231.1 - 5.1e-14 52.2 0.1 8.6e-13 48.3 0.0 2.7 3 0 0 3 3 3 1 B-block binding subunit of TFIIIC PHD PF00628.29 RKO87231.1 - 0.0055 16.6 7.3 0.01 15.7 7.3 1.5 1 0 0 1 1 1 1 PHD-finger MarR_2 PF12802.7 RKO87231.1 - 0.045 13.6 0.0 27 4.8 0.0 3.6 3 0 0 3 3 3 0 MarR family Cullin_Nedd8 PF10557.9 RKO87231.1 - 0.098 12.7 0.1 0.21 11.6 0.1 1.5 1 0 0 1 1 1 0 Cullin protein neddylation domain PHD_4 PF16866.5 RKO87231.1 - 0.22 11.6 3.3 0.44 10.7 3.3 1.5 1 0 0 1 1 1 0 PHD-finger zf-PHD-like PF15446.6 RKO87231.1 - 0.27 10.9 1.5 0.65 9.6 1.2 1.8 2 0 0 2 2 2 0 PHD/FYVE-zinc-finger like domain zf-RING_9 PF13901.6 RKO87231.1 - 0.59 10.1 4.5 1.1 9.2 4.5 1.4 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon Tnp_zf-ribbon_2 PF13842.6 RKO87231.1 - 1.1 10.2 3.0 2.2 9.2 3.0 1.5 1 0 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon Voltage_CLC PF00654.20 RKO87232.1 - 2.5e-88 296.7 24.5 2.9e-88 296.5 24.5 1.1 1 0 0 1 1 1 1 Voltage gated chloride channel CBS PF00571.28 RKO87232.1 - 7.5e-09 35.9 0.0 2.4e-07 31.1 0.0 2.4 2 0 0 2 2 2 1 CBS domain Voltage_CLC PF00654.20 RKO87233.1 - 8.3e-05 22.0 0.1 0.00014 21.3 0.0 1.4 1 1 0 1 1 1 1 Voltage gated chloride channel RGS PF00615.19 RKO87234.1 - 0.019 15.2 0.0 0.083 13.2 0.0 1.9 1 1 0 1 1 1 0 Regulator of G protein signaling domain DUF2207 PF09972.9 RKO87234.1 - 0.18 10.5 0.7 0.29 9.9 0.7 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Kelch_4 PF13418.6 RKO87235.1 - 2.4e-09 37.0 8.2 0.042 13.9 0.1 6.1 5 1 0 5 5 5 3 Galactose oxidase, central domain SH3_9 PF14604.6 RKO87235.1 - 3.2e-08 33.3 0.0 9.6e-08 31.8 0.0 1.9 1 0 0 1 1 1 1 Variant SH3 domain Kelch_6 PF13964.6 RKO87235.1 - 5.2e-06 26.5 6.2 1.8 9.0 0.7 5.2 4 1 1 5 5 5 3 Kelch motif SH3_1 PF00018.28 RKO87235.1 - 0.00013 21.5 0.0 0.00024 20.7 0.0 1.5 1 0 0 1 1 1 1 SH3 domain Kelch_1 PF01344.25 RKO87235.1 - 0.0002 20.8 3.8 1.9 8.1 0.1 5.0 5 0 0 5 5 5 2 Kelch motif Kelch_5 PF13854.6 RKO87235.1 - 0.00024 21.0 8.4 0.81 9.7 0.3 5.1 5 0 0 5 5 5 2 Kelch motif LtrA PF06772.11 RKO87235.1 - 0.069 12.4 0.0 0.11 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial low temperature requirement A protein (LtrA) DUF2273 PF10031.9 RKO87235.1 - 0.12 12.4 1.4 0.2 11.7 1.4 1.3 1 0 0 1 1 1 0 Small integral membrane protein (DUF2273) Phage_HK97_TLTM PF06120.11 RKO87235.1 - 0.46 9.6 0.6 0.72 9.0 0.6 1.1 1 0 0 1 1 1 0 Tail length tape measure protein PGM_PMM_IV PF00408.20 RKO87236.1 - 1.4e-07 31.6 0.0 2.7e-07 30.7 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain UPF0552 PF10574.9 RKO87236.1 - 0.15 11.3 0.0 0.19 11.0 0.0 1.1 1 0 0 1 1 1 0 Arp2/3-interacting proteins Arpin Abhydrolase_1 PF00561.20 RKO87237.1 - 9.8e-23 81.1 0.0 5.5e-19 68.8 0.2 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 RKO87237.1 - 9.3e-21 75.4 7.5 1.1e-20 75.2 7.5 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 RKO87237.1 - 7e-14 51.7 0.0 5.9e-13 48.6 0.0 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ser_hydrolase PF06821.13 RKO87237.1 - 0.0001 22.2 0.0 0.0015 18.4 0.0 2.1 2 0 0 2 2 2 1 Serine hydrolase Abhydrolase_5 PF12695.7 RKO87237.1 - 0.0004 20.2 0.0 0.0016 18.2 0.0 1.8 2 0 0 2 2 2 1 Alpha/beta hydrolase family Thioesterase PF00975.20 RKO87237.1 - 0.0013 18.9 0.0 0.0016 18.6 0.0 1.2 1 0 0 1 1 1 1 Thioesterase domain Ndr PF03096.14 RKO87237.1 - 0.0017 17.1 0.0 0.02 13.6 0.0 2.0 2 0 0 2 2 2 1 Ndr family PGAP1 PF07819.13 RKO87237.1 - 0.0031 17.3 0.1 0.0046 16.7 0.1 1.2 1 0 0 1 1 1 1 PGAP1-like protein Lipase_3 PF01764.25 RKO87237.1 - 0.045 13.6 0.1 0.076 12.9 0.1 1.3 1 0 0 1 1 1 0 Lipase (class 3) Esterase PF00756.20 RKO87237.1 - 0.13 11.9 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 Putative esterase DUF1057 PF06342.12 RKO87237.1 - 0.13 11.2 0.0 0.17 10.8 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) LRR_6 PF13516.6 RKO87239.1 - 2.7e-14 51.9 10.5 0.042 13.9 0.1 10.4 10 0 0 10 10 10 4 Leucine Rich repeat LRR_4 PF12799.7 RKO87239.1 - 6.1e-11 42.4 5.2 0.0019 18.6 0.0 6.6 4 3 1 6 6 6 3 Leucine Rich repeats (2 copies) F-box-like PF12937.7 RKO87239.1 - 1.1e-10 41.2 0.4 1.1e-10 41.2 0.4 3.1 3 0 0 3 3 3 1 F-box-like LRR_1 PF00560.33 RKO87239.1 - 0.00023 21.3 14.5 1.9 9.4 0.1 8.1 8 1 0 8 8 8 1 Leucine Rich Repeat F-box PF00646.33 RKO87239.1 - 0.003 17.4 1.2 0.016 15.1 0.1 2.8 2 0 0 2 2 2 1 F-box domain Pox_F12L PF03337.13 RKO87239.1 - 0.048 11.8 0.1 3.8 5.5 0.0 2.1 2 0 0 2 2 2 0 Poxvirus F12L protein LRR_8 PF13855.6 RKO87239.1 - 0.065 13.0 3.6 0.87 9.4 0.1 4.4 4 2 1 5 5 5 0 Leucine rich repeat SAM_Ste50p PF09235.10 RKO87239.1 - 1.6 9.0 4.4 1.4e+02 2.8 0.0 4.0 4 1 0 4 4 4 0 Ste50p, sterile alpha motif ATP_bind_3 PF01171.20 RKO87240.1 - 1.7e-26 93.1 0.0 5.4e-26 91.5 0.0 1.7 1 1 0 1 1 1 1 PP-loop family Pkinase PF00069.25 RKO87241.1 - 4.4e-65 219.7 0.0 5e-65 219.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO87241.1 - 2.5e-34 118.7 0.0 2.9e-34 118.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO87241.1 - 4.9e-05 22.8 0.1 0.00016 21.1 0.0 1.8 2 0 0 2 2 2 1 Kinase-like FTA2 PF13095.6 RKO87241.1 - 0.015 15.0 0.0 0.51 9.9 0.0 2.1 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 APH PF01636.23 RKO87241.1 - 0.041 13.8 0.0 0.49 10.3 0.0 2.0 1 1 1 2 2 2 0 Phosphotransferase enzyme family Haspin_kinase PF12330.8 RKO87241.1 - 0.15 11.0 0.4 0.23 10.3 0.4 1.3 1 1 0 1 1 1 0 Haspin like kinase domain ApoO PF09769.9 RKO87243.1 - 4.4e-28 97.8 0.1 7e-28 97.2 0.1 1.3 1 0 0 1 1 1 1 Apolipoprotein O Velvet PF11754.8 RKO87244.1 - 7.4e-39 134.2 0.0 8.9e-39 133.9 0.0 1.0 1 0 0 1 1 1 1 Velvet factor Methyltr_RsmB-F PF01189.17 RKO87245.1 - 2.9e-35 121.7 0.0 1.1e-31 110.0 0.0 2.5 2 1 0 2 2 2 2 16S rRNA methyltransferase RsmB/F FtsJ PF01728.19 RKO87245.1 - 0.03 14.4 0.0 0.051 13.7 0.0 1.5 1 1 0 1 1 1 0 FtsJ-like methyltransferase Fasciclin PF02469.22 RKO87246.1 - 0.00056 20.1 0.0 0.00089 19.5 0.0 1.3 1 1 0 1 1 1 1 Fasciclin domain DUF2625 PF10946.8 RKO87246.1 - 0.14 11.2 0.0 0.24 10.4 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function DUF2625 Ribosomal_S15 PF00312.22 RKO87247.1 - 5.3e-22 77.8 1.3 9.2e-22 77.1 1.3 1.4 1 0 0 1 1 1 1 Ribosomal protein S15 GATase PF00117.28 RKO87248.1 - 1.4e-42 145.7 0.0 1.8e-42 145.3 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I CPSase_sm_chain PF00988.22 RKO87248.1 - 5.8e-08 32.6 0.0 1.2e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain Peptidase_C26 PF07722.13 RKO87248.1 - 0.00033 20.5 0.5 0.066 13.0 0.2 2.2 1 1 1 2 2 2 2 Peptidase C26 Spc7 PF08317.11 RKO87249.1 - 0.038 12.9 0.5 0.064 12.1 0.5 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Cytochrom_C1 PF02167.15 RKO87250.1 - 6.1e-95 317.1 0.0 7.1e-95 316.9 0.0 1.0 1 0 0 1 1 1 1 Cytochrome C1 family Cytochrome_CBB3 PF13442.6 RKO87250.1 - 0.0021 18.4 0.4 0.0046 17.3 0.4 1.8 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 RKO87250.1 - 0.01 17.0 1.0 0.024 15.8 0.9 1.8 1 1 0 1 1 1 0 Cytochrome c Abhydrolase_5 PF12695.7 RKO87250.1 - 0.13 12.0 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family PTEN_C2 PF10409.9 RKO87251.1 - 1.1e-15 57.6 0.0 1.6e-15 57.1 0.0 1.2 1 0 0 1 1 1 1 C2 domain of PTEN tumour-suppressor protein Y_phosphatase3 PF13350.6 RKO87251.1 - 0.0091 16.0 0.0 0.021 14.8 0.0 1.5 1 0 0 1 1 1 1 Tyrosine phosphatase family ThiG PF05690.14 RKO87251.1 - 0.089 12.1 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG Y_phosphatase PF00102.27 RKO87251.1 - 0.14 11.7 0.0 0.26 10.8 0.0 1.4 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Amidase_5 PF05382.13 RKO87252.1 - 0.097 12.6 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage peptidoglycan hydrolase CHASE6_C PF17150.4 RKO87253.1 - 0.011 16.4 0.1 0.87 10.3 0.1 2.5 2 0 0 2 2 2 0 C-terminal domain of two-partite extracellular sensor domain DUF4449 PF14613.6 RKO87254.1 - 0.00019 21.6 0.1 0.00023 21.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4449) Qua1 PF16274.5 RKO87255.1 - 0.0079 16.0 0.2 0.024 14.5 0.2 1.8 1 0 0 1 1 1 1 Qua1 domain Ribosomal_S13 PF00416.22 RKO87255.1 - 0.015 15.7 1.6 0.028 14.8 1.6 1.4 1 0 0 1 1 1 0 Ribosomal protein S13/S18 Capsid_N PF16903.5 RKO87256.1 - 2.2e-29 102.6 0.4 3.4e-29 102.0 0.1 1.4 2 0 0 2 2 2 1 Major capsid protein N-terminus Capsid_NCLDV PF04451.12 RKO87256.1 - 2.2e-10 40.7 0.4 4.8e-10 39.6 0.4 1.5 1 0 0 1 1 1 1 Large eukaryotic DNA virus major capsid protein SUI1 PF01253.22 RKO87257.1 - 1.8e-21 76.4 0.0 2.3e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 DOPA_dioxygen PF08883.11 RKO87258.1 - 3.5e-09 36.8 0.1 1.1e-08 35.2 0.1 1.6 1 1 0 1 1 1 1 Dopa 4,5-dioxygenase family Glyco_hydro_43 PF04616.14 RKO87259.1 - 5.5e-37 127.6 0.0 6.1e-37 127.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 43 Glyco_hydro_43 PF04616.14 RKO87260.1 - 1.4e-05 24.6 0.0 1.9e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 43 Cyclin_C PF02984.19 RKO87262.1 - 1.3e-08 34.9 0.1 1.6e-08 34.7 0.1 1.1 1 0 0 1 1 1 1 Cyclin, C-terminal domain Cyclin_N PF00134.23 RKO87263.1 - 2.7e-47 159.7 0.6 5.4e-47 158.7 0.2 1.6 2 0 0 2 2 2 1 Cyclin, N-terminal domain Cyclin_C PF02984.19 RKO87263.1 - 1.1e-19 70.7 0.0 2.2e-19 69.7 0.0 1.4 1 0 0 1 1 1 1 Cyclin, C-terminal domain AraC_N PF06719.13 RKO87265.1 - 6.8e-06 25.8 0.0 0.13 11.9 0.0 5.2 4 2 1 5 5 5 1 AraC-type transcriptional regulator N-terminus eIF3_N PF09440.10 RKO87265.1 - 0.003 18.0 0.1 3.7 8.0 0.0 5.0 3 2 2 6 6 6 1 eIF3 subunit 6 N terminal domain FLYWCH_N PF15423.6 RKO87265.1 - 0.0033 17.5 2.2 79 3.4 0.0 6.7 6 2 3 9 9 9 0 FLYWCH-type zinc finger-containing protein AraC_binding PF02311.19 RKO87265.1 - 0.044 13.7 0.2 30 4.5 0.0 4.3 2 1 2 4 4 4 0 AraC-like ligand binding domain Alpha_E3_glycop PF01563.16 RKO87265.1 - 0.053 13.6 5.7 11 6.2 0.1 5.6 5 3 2 7 7 7 0 Alphavirus E3 glycoprotein HNH_2 PF13391.6 RKO87266.1 - 0.024 14.8 0.5 0.092 12.9 0.0 2.2 2 1 0 2 2 2 0 HNH endonuclease Ten1_2 PF15490.6 RKO87266.1 - 0.064 13.0 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Telomere-capping, CST complex subunit Lipase_3 PF01764.25 RKO87268.1 - 1.1e-13 51.3 0.0 1.4e-13 50.9 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO87268.1 - 6.4e-06 25.9 0.1 1.8e-05 24.4 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2974) Lipase_3 PF01764.25 RKO87269.1 - 2e-13 50.4 0.0 3e-13 49.9 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO87269.1 - 0.00036 20.2 1.2 0.0021 17.6 1.2 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Arrestin_N PF00339.29 RKO87270.1 - 2.1e-09 37.6 0.0 6e-09 36.1 0.0 1.6 1 1 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain SIMPL PF04402.14 RKO87270.1 - 0.42 11.0 7.8 0.81 10.1 7.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF541) SDH_alpha PF03313.15 RKO87272.1 - 1.4e-94 316.6 6.7 1.7e-94 316.4 6.7 1.0 1 0 0 1 1 1 1 Serine dehydratase alpha chain Phycobilisome PF00502.19 RKO87273.1 - 0.21 11.5 0.0 0.41 10.6 0.0 1.4 1 0 0 1 1 1 0 Phycobilisome protein WD40_3 PF15911.5 RKO87274.1 - 0.057 13.4 0.0 0.25 11.4 0.0 2.0 2 0 0 2 2 2 0 WD domain, G-beta repeat WD40 PF00400.32 RKO87274.1 - 0.063 14.2 2.4 0.73 10.8 0.6 2.8 2 0 0 2 2 2 0 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO87274.1 - 0.14 12.5 0.0 6 7.2 0.0 2.5 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain PA PF02225.22 RKO87276.1 - 5.6e-08 32.7 0.0 1e-07 31.8 0.0 1.5 1 0 0 1 1 1 1 PA domain F-box-like PF12937.7 RKO87277.1 - 2.8e-09 36.7 1.5 2.8e-09 36.7 1.5 1.9 2 0 0 2 2 2 1 F-box-like WD40 PF00400.32 RKO87277.1 - 3.1e-09 37.3 10.4 0.00053 20.7 0.1 4.4 5 0 0 5 5 5 3 WD domain, G-beta repeat F-box PF00646.33 RKO87277.1 - 1.4e-08 34.4 0.8 2.6e-08 33.5 0.8 1.5 1 0 0 1 1 1 1 F-box domain GXGXG PF01493.19 RKO87277.1 - 0.016 14.8 0.0 0.1 12.2 0.1 1.9 2 0 0 2 2 2 0 GXGXG motif p450 PF00067.22 RKO87279.1 - 1.6e-42 145.9 0.0 1.9e-42 145.6 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Exotox-A_target PF09102.10 RKO87279.1 - 0.13 12.3 0.5 7.4 6.6 0.0 2.9 2 1 1 3 3 3 0 Exotoxin A, targeting p450 PF00067.22 RKO87280.1 - 0.023 13.4 0.0 0.031 13.0 0.0 1.1 1 0 0 1 1 1 0 Cytochrome P450 RRM_1 PF00076.22 RKO87281.1 - 1.9e-10 40.4 0.1 3.2e-05 23.7 0.1 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 RKO87281.1 - 0.00029 20.6 0.0 0.022 14.6 0.0 2.2 2 0 0 2 2 2 2 Occluded RNA-recognition motif SET_assoc PF11767.8 RKO87281.1 - 0.032 13.9 0.2 0.069 12.8 0.2 1.4 1 0 0 1 1 1 0 Histone lysine methyltransferase SET associated Menin PF05053.13 RKO87282.1 - 0.079 11.3 2.3 0.1 11.0 2.3 1.1 1 0 0 1 1 1 0 Menin Secretin_N_2 PF07655.13 RKO87282.1 - 2.8 8.5 9.8 5.1 7.7 9.8 1.3 1 0 0 1 1 1 0 Secretin N-terminal domain FAD_binding_3 PF01494.19 RKO87283.1 - 3.8e-20 72.4 0.0 9.2e-11 41.6 0.0 2.3 2 0 0 2 2 2 2 FAD binding domain NAD_binding_8 PF13450.6 RKO87283.1 - 4.9e-07 29.9 0.0 1.4e-06 28.5 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 RKO87283.1 - 0.0034 17.0 0.1 0.01 15.5 0.0 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 RKO87283.1 - 0.0042 17.6 0.0 0.033 14.7 0.0 2.4 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 RKO87283.1 - 0.0053 15.9 0.0 0.01 14.9 0.0 1.4 1 0 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_2 PF07992.14 RKO87283.1 - 0.0061 15.8 0.0 0.015 14.5 0.0 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 RKO87283.1 - 0.0066 15.6 0.0 0.013 14.6 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain DAGK_cat PF00781.24 RKO87283.1 - 0.0086 15.7 0.1 0.025 14.2 0.1 1.8 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain SE PF08491.10 RKO87283.1 - 0.013 14.5 0.0 2.7 7.0 0.0 2.2 2 0 0 2 2 2 0 Squalene epoxidase Pyr_redox_3 PF13738.6 RKO87283.1 - 0.042 13.1 0.0 0.064 12.5 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 RKO87283.1 - 0.063 12.6 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 RKO87283.1 - 0.095 11.9 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 Thi4 family Ank_4 PF13637.6 RKO87284.1 - 0.091 13.4 0.9 15 6.3 0.1 2.7 2 0 0 2 2 2 0 Ankyrin repeats (many copies) RAP1 PF07218.11 RKO87287.1 - 0.095 11.0 7.0 0.1 10.9 7.0 1.2 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) DUF4614 PF15391.6 RKO87289.1 - 0.84 9.6 12.0 0.33 10.9 7.7 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4614) UAA PF08449.11 RKO87291.1 - 8.1e-54 182.9 9.1 9.1e-54 182.7 9.1 1.0 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 RKO87291.1 - 4.3e-09 36.6 19.6 1.2e-06 28.8 7.0 2.6 2 1 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 RKO87291.1 - 3.2e-07 30.0 7.1 0.0016 17.8 0.2 2.0 2 0 0 2 2 2 2 Triose-phosphate Transporter family SLC35F PF06027.12 RKO87291.1 - 1.1e-05 25.1 5.6 1.6e-05 24.6 5.6 1.3 1 0 0 1 1 1 1 Solute carrier family 35 Nuc_sug_transp PF04142.15 RKO87291.1 - 0.0037 16.5 0.7 0.47 9.6 0.1 2.3 2 0 0 2 2 2 2 Nucleotide-sugar transporter ABC_membrane PF00664.23 RKO87292.1 - 3.1e-70 237.0 18.4 5.6e-59 200.0 12.0 2.1 2 0 0 2 2 2 2 ABC transporter transmembrane region ABC_tran PF00005.27 RKO87292.1 - 3.6e-69 231.6 0.0 1.9e-34 119.1 0.0 2.4 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 RKO87292.1 - 1.9e-16 60.2 2.2 3.5e-06 26.6 0.0 4.2 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.9 RKO87292.1 - 6.1e-09 35.2 0.8 0.00013 20.9 0.2 2.9 3 0 0 3 3 3 2 Predicted ATPase of the ABC class AAA_29 PF13555.6 RKO87292.1 - 4.1e-07 29.6 0.6 0.0028 17.3 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 RKO87292.1 - 4.2e-07 30.5 1.8 0.025 15.0 0.1 3.5 2 2 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 RKO87292.1 - 9.9e-07 29.1 1.8 0.087 13.1 0.1 3.9 2 2 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 RKO87292.1 - 4.4e-06 26.7 0.3 0.045 13.7 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_15 PF13175.6 RKO87292.1 - 8.7e-06 25.7 0.1 0.032 13.9 0.0 2.2 2 0 0 2 2 2 2 AAA ATPase domain AAA_30 PF13604.6 RKO87292.1 - 1.6e-05 24.8 0.0 0.16 11.7 0.0 3.2 3 1 0 3 3 3 2 AAA domain AAA_24 PF13479.6 RKO87292.1 - 2.7e-05 24.0 0.0 0.18 11.5 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 RKO87292.1 - 8.3e-05 22.6 0.2 1.3 9.1 0.0 4.0 4 0 0 4 4 4 2 AAA domain (dynein-related subfamily) DUF815 PF05673.13 RKO87292.1 - 0.00013 21.2 0.0 0.034 13.3 0.0 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA PF00004.29 RKO87292.1 - 0.00035 21.0 5.6 0.55 10.6 0.9 4.2 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_21 PF13304.6 RKO87292.1 - 0.00039 20.3 2.4 0.92 9.2 0.0 3.7 3 1 1 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF87 PF01935.17 RKO87292.1 - 0.00042 20.5 1.1 0.56 10.3 0.1 2.9 3 0 0 3 3 3 2 Helicase HerA, central domain AAA_25 PF13481.6 RKO87292.1 - 0.00062 19.4 0.0 1.8 8.1 0.0 2.8 2 0 0 2 2 2 2 AAA domain G-alpha PF00503.20 RKO87292.1 - 0.00091 18.5 0.0 0.39 9.8 0.0 2.2 2 0 0 2 2 2 2 G-protein alpha subunit Zeta_toxin PF06414.12 RKO87292.1 - 0.0018 17.6 1.4 0.53 9.5 0.0 3.1 3 0 0 3 3 3 1 Zeta toxin Rad17 PF03215.15 RKO87292.1 - 0.0026 17.7 0.1 0.095 12.6 0.0 2.4 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_7 PF12775.7 RKO87292.1 - 0.0032 17.0 0.0 0.7 9.4 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region SbcCD_C PF13558.6 RKO87292.1 - 0.0088 16.3 6.0 3.6 7.9 0.5 4.0 3 2 0 3 3 2 2 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 RKO87292.1 - 0.0088 16.6 0.0 7.4 7.1 0.0 2.7 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 RKO87292.1 - 0.012 15.8 0.2 8.6 6.5 0.0 2.7 2 0 0 2 2 2 0 AAA domain PRK PF00485.18 RKO87292.1 - 0.012 15.3 0.3 5.6 6.6 0.0 2.4 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_28 PF13521.6 RKO87292.1 - 0.017 15.3 0.3 7.9 6.7 0.0 2.5 2 0 0 2 2 2 0 AAA domain Synapsin_N PF10581.9 RKO87292.1 - 0.017 15.0 0.2 1.8 8.6 0.0 3.0 3 0 0 3 3 2 0 Synapsin N-terminal SRP54 PF00448.22 RKO87292.1 - 0.024 14.3 0.0 6.8 6.3 0.0 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_23 PF13476.6 RKO87292.1 - 0.026 15.0 0.6 8.4 6.8 0.1 2.5 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 RKO87292.1 - 0.04 14.0 0.2 4.8 7.3 0.0 2.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase RNA_helicase PF00910.22 RKO87292.1 - 0.059 13.8 0.2 7.4 7.0 0.1 2.6 2 0 0 2 2 2 0 RNA helicase DUF2057 PF09829.9 RKO87292.1 - 0.08 13.1 0.4 9.1 6.4 0.1 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2057) NB-ARC PF00931.22 RKO87292.1 - 0.13 11.4 1.0 9.1 5.4 0.1 2.7 3 0 0 3 3 3 0 NB-ARC domain APS_kinase PF01583.20 RKO87292.1 - 0.16 11.8 0.2 2 8.3 0.0 2.4 2 0 0 2 2 2 0 Adenylylsulphate kinase IstB_IS21 PF01695.17 RKO87292.1 - 2.2 8.0 5.1 53 3.5 0.0 3.7 5 0 0 5 5 3 0 IstB-like ATP binding protein Band_7 PF01145.25 RKO87293.1 - 2.1e-11 44.2 1.2 4.7e-11 43.0 1.2 1.7 1 0 0 1 1 1 1 SPFH domain / Band 7 family Ank_5 PF13857.6 RKO87296.1 - 0.0003 21.0 0.1 0.06 13.7 0.0 2.9 1 1 2 3 3 3 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO87296.1 - 0.00046 20.7 0.0 0.079 13.6 0.0 2.8 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO87296.1 - 0.069 13.7 0.0 0.15 12.7 0.0 1.6 1 1 0 1 1 1 0 Ankyrin repeats (3 copies) VHL_C PF17211.3 RKO87296.1 - 0.075 13.1 0.0 43 4.2 0.0 3.1 3 0 0 3 3 3 0 VHL box domain Mito_carr PF00153.27 RKO87297.1 - 0.00072 19.4 0.1 0.00099 19.0 0.1 1.2 1 0 0 1 1 1 1 Mitochondrial carrier protein Ras PF00071.22 RKO87298.1 - 0.016 14.8 0.0 0.021 14.4 0.0 1.2 1 0 0 1 1 1 0 Ras family Pkinase PF00069.25 RKO87299.1 - 4e-25 88.7 0.0 4.5e-20 72.1 0.0 2.2 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 RKO87299.1 - 3.4e-12 46.2 0.0 7.4e-12 45.1 0.0 1.6 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO87299.1 - 0.003 16.9 0.0 0.029 13.7 0.0 2.3 2 1 0 2 2 2 1 Kinase-like APH PF01636.23 RKO87299.1 - 0.022 14.7 0.6 0.068 13.1 0.0 2.0 2 0 0 2 2 2 0 Phosphotransferase enzyme family Kdo PF06293.14 RKO87299.1 - 0.043 13.2 0.0 0.066 12.5 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DNA_pol_lambd_f PF10391.9 RKO87301.1 - 1.4e-10 40.8 0.0 6.3e-10 38.7 0.0 2.1 2 0 0 2 2 2 1 Fingers domain of DNA polymerase lambda DNA_pol_B_palm PF14792.6 RKO87301.1 - 9.2e-07 29.1 0.0 1.7e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase beta palm DNA_pol_B_thumb PF14791.6 RKO87301.1 - 3.3e-06 27.1 0.0 6.1e-06 26.3 0.0 1.5 1 0 0 1 1 1 1 DNA polymerase beta thumb PPR_2 PF13041.6 RKO87303.1 - 4.9e-35 119.5 0.0 2.4e-07 30.8 0.0 8.9 5 1 4 9 9 9 6 PPR repeat family PPR PF01535.20 RKO87303.1 - 3.1e-27 92.9 4.4 0.0077 16.4 0.0 10.7 12 0 0 12 12 12 6 PPR repeat PPR_3 PF13812.6 RKO87303.1 - 1e-22 80.0 0.0 0.00035 20.6 0.0 7.8 5 2 3 8 8 8 5 Pentatricopeptide repeat domain PPR_1 PF12854.7 RKO87303.1 - 3.2e-21 74.7 0.0 0.00023 20.8 0.0 8.1 9 0 0 9 9 9 4 PPR repeat PPR_long PF17177.4 RKO87303.1 - 3.6e-14 52.6 0.0 4.2e-06 26.3 0.0 4.0 1 1 2 4 4 4 4 Pentacotripeptide-repeat region of PRORP TPR_19 PF14559.6 RKO87303.1 - 2.9e-06 27.7 7.6 0.24 11.9 0.1 4.6 4 1 1 5 5 5 4 Tetratricopeptide repeat TPR_14 PF13428.6 RKO87303.1 - 9.3e-06 26.1 16.8 2.3 9.2 0.3 7.4 5 3 2 7 7 7 2 Tetratricopeptide repeat ATP13 PF12921.7 RKO87303.1 - 5.1e-05 23.1 0.0 1.1 9.1 0.0 3.9 2 2 1 3 3 3 2 Mitochondrial ATPase expression Clathrin PF00637.20 RKO87303.1 - 0.0015 18.4 0.0 0.0077 16.1 0.0 2.0 2 0 0 2 2 2 1 Region in Clathrin and VPS TPR_16 PF13432.6 RKO87303.1 - 0.077 13.7 21.8 0.11 13.2 1.0 5.6 5 2 2 7 7 7 0 Tetratricopeptide repeat Peptidase_M36 PF02128.15 RKO87304.1 - 6e-127 423.8 0.1 7.6e-127 423.5 0.1 1.1 1 0 0 1 1 1 1 Fungalysin metallopeptidase (M36) FTP PF07504.13 RKO87304.1 - 2e-12 46.7 4.1 5e-12 45.5 4.1 1.7 1 0 0 1 1 1 1 Fungalysin/Thermolysin Propeptide Motif RRM_1 PF00076.22 RKO87307.1 - 8.2e-13 48.0 0.0 1.2e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 RKO87307.1 - 0.0054 16.7 0.0 0.008 16.2 0.0 1.2 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif DUF5090 PF17009.5 RKO87309.1 - 0.054 13.5 3.7 0.07 13.1 3.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) WD40 PF00400.32 RKO87314.1 - 1.2e-28 98.8 4.0 6.3e-10 39.5 0.5 7.0 7 0 0 7 7 7 5 WD domain, G-beta repeat BOP1NT PF08145.12 RKO87314.1 - 2.4e-26 93.2 2.4 4.1e-26 92.5 2.4 1.3 1 0 0 1 1 1 1 BOP1NT (NUC169) domain ANAPC4_WD40 PF12894.7 RKO87314.1 - 8.5e-08 32.4 0.1 0.0011 19.3 0.2 4.0 3 1 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain DUF1513 PF07433.11 RKO87314.1 - 0.2 10.7 0.1 3.2 6.8 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1513) tRNA-synt_1g PF09334.11 RKO87315.1 - 3.6e-13 49.0 0.0 3e-09 36.1 0.0 3.5 1 1 2 3 3 3 2 tRNA synthetases class I (M) SHIPPO-rpt PF07004.12 RKO87315.1 - 0.00015 22.5 40.4 0.045 14.7 0.6 7.2 7 0 0 7 7 7 3 Sperm-tail PG-rich repeat tRNA-synt_1 PF00133.22 RKO87315.1 - 0.0019 16.5 0.0 1 7.5 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) Iso_dh PF00180.20 RKO87317.1 - 6.4e-117 390.6 0.0 7.8e-117 390.3 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Dak2 PF02734.17 RKO87320.1 - 0.088 12.7 0.3 27 4.6 0.0 2.9 3 0 0 3 3 3 0 DAK2 domain Seryl_tRNA_N PF02403.22 RKO87321.1 - 1.6e-12 47.6 0.6 1.6e-12 47.6 0.6 1.9 2 1 0 2 2 2 1 Seryl-tRNA synthetase N-terminal domain Ank_2 PF12796.7 RKO87323.1 - 2.4e-18 66.5 6.2 0.00038 21.0 0.0 5.4 3 2 2 5 5 5 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO87323.1 - 2e-10 41.0 11.0 0.16 12.6 0.1 6.9 5 2 0 6 6 6 4 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO87323.1 - 7.8e-10 38.8 8.8 0.0087 16.4 0.0 7.6 6 2 2 8 8 8 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO87323.1 - 6.9e-06 26.0 12.3 8.9 7.2 0.0 8.0 9 1 1 10 10 10 3 Ankyrin repeat DUF2336 PF10098.9 RKO87323.1 - 0.002 17.6 1.1 0.004 16.7 0.2 1.9 2 0 0 2 2 2 1 Uncharacterised protein conserved in bacteria (DUF2336) F-box PF00646.33 RKO87323.1 - 0.35 10.8 1.3 33 4.5 0.2 2.7 2 0 0 2 2 2 0 F-box domain SDA1 PF05285.12 RKO87323.1 - 3 7.2 6.2 4.2 6.7 6.2 1.1 1 0 0 1 1 1 0 SDA1 ABC_membrane PF00664.23 RKO87324.1 - 2.1e-60 204.7 25.8 5.2e-34 118.1 6.0 2.2 2 0 0 2 2 2 2 ABC transporter transmembrane region ABC_tran PF00005.27 RKO87324.1 - 1.2e-14 55.0 0.0 5.8e-14 52.8 0.0 2.1 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 RKO87324.1 - 0.00066 19.2 0.0 0.53 9.7 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 RKO87324.1 - 0.013 15.3 0.0 0.032 14.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain BCA_ABC_TP_C PF12399.8 RKO87324.1 - 0.014 15.3 0.0 0.03 14.2 0.0 1.6 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter MMR_HSR1 PF01926.23 RKO87324.1 - 0.031 14.4 0.0 0.092 12.8 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_21 PF13304.6 RKO87324.1 - 0.11 12.2 0.3 1.7 8.4 0.1 2.2 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system TcdA_TcdB_pore PF12920.7 RKO87324.1 - 0.16 10.2 0.1 0.25 9.6 0.1 1.2 1 0 0 1 1 1 0 TcdA/TcdB pore forming domain ABC_membrane PF00664.23 RKO87325.1 - 2.2e-15 57.1 0.0 2.8e-15 56.7 0.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region SH3_1 PF00018.28 RKO87326.1 - 1.1e-37 127.4 3.1 8.7e-13 47.7 0.1 3.5 3 0 0 3 3 3 3 SH3 domain SH3_9 PF14604.6 RKO87326.1 - 2e-34 117.2 3.6 3e-10 39.8 0.1 3.3 3 0 0 3 3 3 3 Variant SH3 domain SH3_2 PF07653.17 RKO87326.1 - 6.3e-22 77.0 0.0 5.9e-06 25.9 0.0 3.5 3 0 0 3 3 3 3 Variant SH3 domain SH3_10 PF17902.1 RKO87326.1 - 3.6e-05 23.8 0.1 0.0062 16.6 0.0 2.5 2 0 0 2 2 2 2 SH3 domain SH3_3 PF08239.11 RKO87326.1 - 0.27 11.5 3.2 0.68 10.3 0.2 2.7 3 0 0 3 3 3 0 Bacterial SH3 domain ANAPC4_WD40 PF12894.7 RKO87327.1 - 9.8e-13 48.2 3.7 0.0094 16.2 0.2 5.2 3 2 2 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 RKO87327.1 - 3.1e-08 34.1 2.4 0.0082 17.0 0.0 5.3 5 1 0 5 5 5 2 WD domain, G-beta repeat eIF2A PF08662.11 RKO87327.1 - 5.5e-05 23.1 0.7 0.0089 15.9 0.1 2.9 3 0 0 3 3 3 2 Eukaryotic translation initiation factor eIF2A IKI3 PF04762.12 RKO87327.1 - 0.023 12.7 0.0 0.36 8.8 0.0 2.2 3 0 0 3 3 3 0 IKI3 family SR-25 PF10500.9 RKO87328.1 - 1.1 8.9 25.5 1.5 8.4 23.7 2.1 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein DUF4820 PF16091.5 RKO87328.1 - 6.2 6.1 11.4 14 5.0 11.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) Presenilin PF01080.17 RKO87328.1 - 9.7 4.8 8.1 17 4.0 8.1 1.3 1 0 0 1 1 1 0 Presenilin EVE PF01878.18 RKO87330.1 - 2.2e-56 189.9 0.0 2.7e-56 189.6 0.0 1.1 1 0 0 1 1 1 1 EVE domain Peptidase_C12 PF01088.21 RKO87331.1 - 2e-54 184.5 0.0 3e-54 183.9 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 UCH_C PF18031.1 RKO87331.1 - 4.2e-10 39.4 0.2 8.9e-10 38.3 0.2 1.4 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolases Glyco_transf_64 PF09258.10 RKO87332.1 - 3.2e-56 190.3 0.0 4.1e-56 190.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 64 domain EF1_GNE PF00736.19 RKO87333.1 - 1.9e-29 101.6 1.0 1.9e-29 101.6 1.0 1.6 2 0 0 2 2 2 1 EF-1 guanine nucleotide exchange domain EF-1_beta_acid PF10587.9 RKO87333.1 - 1.9e-15 57.0 6.8 1.9e-15 57.0 6.8 2.4 3 0 0 3 3 3 1 Eukaryotic elongation factor 1 beta central acidic region MinC_N PF05209.13 RKO87333.1 - 0.057 13.4 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 Septum formation inhibitor MinC, N-terminal domain DUF3246 PF11596.8 RKO87333.1 - 0.063 12.7 0.1 0.084 12.3 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3246) GST_C_6 PF17171.4 RKO87333.1 - 0.11 12.3 0.0 0.21 11.4 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain DUF3567 PF12091.8 RKO87335.1 - 0.14 12.3 0.0 0.23 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3567) Abhydrolase_9_N PF15420.6 RKO87335.1 - 0.32 11.0 11.1 0.43 10.6 5.1 2.7 3 1 1 4 4 4 0 Alpha/beta-hydrolase family N-terminus DUF4203 PF13886.6 RKO87335.1 - 6 6.5 18.1 0.086 12.5 10.4 1.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4203) Synaptobrevin PF00957.21 RKO87337.1 - 1.1e-13 50.8 1.8 1.4e-13 50.5 1.8 1.1 1 0 0 1 1 1 1 Synaptobrevin DUF872 PF05915.12 RKO87337.1 - 0.015 15.5 0.1 0.026 14.7 0.0 1.4 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DUF2207 PF09972.9 RKO87337.1 - 0.27 9.9 0.0 0.28 9.9 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) Homeodomain PF00046.29 RKO87338.1 - 0.15 11.9 0.2 0.3 11.0 0.2 1.4 1 0 0 1 1 1 0 Homeodomain AAA_21 PF13304.6 RKO87339.1 - 1.7e-06 28.1 0.2 3.1e-06 27.2 0.2 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 RKO87339.1 - 0.00035 21.1 0.0 0.00092 19.7 0.0 1.7 2 0 0 2 2 2 1 ABC transporter Aconitase PF00330.20 RKO87340.1 - 2e-157 524.9 0.0 2.4e-157 524.6 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 RKO87340.1 - 2.8e-38 131.2 0.0 4.5e-38 130.5 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Chitin_synth_1 PF01644.17 RKO87342.1 - 2.3e-77 258.6 0.1 3e-77 258.2 0.1 1.1 1 0 0 1 1 1 1 Chitin synthase Chitin_synth_1N PF08407.11 RKO87342.1 - 1.1e-19 70.2 0.2 2.2e-19 69.2 0.2 1.6 1 0 0 1 1 1 1 Chitin synthase N-terminal Chitin_synth_2 PF03142.15 RKO87342.1 - 7e-08 31.5 0.0 2.1e-07 29.9 0.0 1.7 2 0 0 2 2 2 1 Chitin synthase SCHIP-1 PF10148.9 RKO87345.1 - 0.25 10.9 1.2 0.55 9.8 1.2 1.7 1 0 0 1 1 1 0 Schwannomin-interacting protein 1 MciZ PF13072.6 RKO87345.1 - 0.45 10.4 1.5 0.88 9.4 1.5 1.4 1 0 0 1 1 1 0 Mother cell inhibitor of FtsZ Ran_BP1 PF00638.18 RKO87347.1 - 0.15 12.3 0.7 0.29 11.4 0.0 1.7 2 0 0 2 2 2 0 RanBP1 domain tRNA-synt_1c PF00749.21 RKO87348.1 - 1.7e-47 161.8 0.0 2.2e-47 161.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain GST_C PF00043.25 RKO87348.1 - 0.00031 20.9 0.0 0.00059 20.0 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 RKO87348.1 - 0.00045 20.2 1.3 0.00081 19.4 0.5 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 RKO87348.1 - 0.0012 19.0 0.1 0.0029 17.8 0.1 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain DapB_N PF01113.20 RKO87349.1 - 0.033 14.3 0.5 0.15 12.2 0.5 2.2 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Glyoxal_oxid_N PF07250.11 RKO87350.1 - 3.9e-31 108.1 0.1 1.3e-30 106.4 0.1 1.9 1 1 0 1 1 1 1 Glyoxal oxidase N-terminus DUF1929 PF09118.11 RKO87350.1 - 2.1e-25 88.8 0.8 4e-25 87.9 0.8 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1929) Kelch_4 PF13418.6 RKO87350.1 - 0.013 15.5 3.3 0.15 12.1 0.0 3.6 5 0 0 5 5 5 0 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO87350.1 - 0.02 14.9 0.0 0.19 11.7 0.0 2.5 2 0 0 2 2 2 0 Kelch motif RhoGEF67_u2 PF16614.5 RKO87351.1 - 0.013 15.6 0.2 0.04 14.0 0.2 1.8 1 1 0 1 1 1 0 Unstructured region two on RhoGEF 6 and 7 GspL_C PF12693.7 RKO87353.1 - 0.16 11.8 0.1 0.22 11.3 0.1 1.2 1 0 0 1 1 1 0 GspL periplasmic domain tRNA_SAD PF07973.14 RKO87356.1 - 9.4e-08 32.0 0.0 2.2e-07 30.9 0.0 1.6 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Pkinase_Tyr PF07714.17 RKO87358.1 - 1.6e-42 145.6 0.0 1.8e-42 145.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 RKO87358.1 - 9.1e-29 100.6 0.0 1.1e-28 100.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 RKO87358.1 - 0.0031 16.9 0.0 0.0038 16.6 0.0 1.1 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 RKO87358.1 - 0.018 15.0 0.0 0.029 14.3 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family RIO1 PF01163.22 RKO87358.1 - 0.064 12.8 0.0 0.089 12.4 0.0 1.2 1 0 0 1 1 1 0 RIO1 family Nup88 PF10168.9 RKO87360.1 - 8.4e-31 106.5 0.0 3.6e-17 61.5 0.0 2.4 2 1 0 2 2 2 2 Nuclear pore component ubiquitin PF00240.23 RKO87361.1 - 1.7e-14 53.3 0.1 3.2e-14 52.4 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin family Ubiquitin_5 PF18037.1 RKO87361.1 - 0.0014 18.9 0.2 0.003 17.9 0.2 1.5 1 0 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_2 PF14560.6 RKO87361.1 - 0.0058 17.1 0.0 0.016 15.7 0.0 1.7 1 1 0 1 1 1 1 Ubiquitin-like domain Coilin_N PF15862.5 RKO87361.1 - 0.009 15.8 0.4 0.014 15.2 0.4 1.2 1 0 0 1 1 1 1 Coilin N-terminus TBK1_ULD PF18396.1 RKO87361.1 - 0.054 13.4 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain Asp PF00026.23 RKO87363.1 - 1.2e-31 110.3 0.0 1.5e-31 110.0 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Rrn6 PF10214.9 RKO87364.1 - 0.019 13.5 0.0 1 7.7 0.0 2.2 2 0 0 2 2 2 0 RNA polymerase I-specific transcription-initiation factor Beta-TrCP_D PF12125.8 RKO87364.1 - 0.19 11.7 0.1 0.37 10.7 0.1 1.5 1 0 0 1 1 1 0 D domain of beta-TrCP Peptidase_S28 PF05577.12 RKO87365.1 - 8.8e-27 94.0 0.0 1.1e-26 93.7 0.0 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase S28 Hexapep PF00132.24 RKO87366.1 - 0.012 15.3 2.9 0.022 14.4 2.9 1.5 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) DUF1929 PF09118.11 RKO87367.1 - 3.2e-21 75.4 0.6 7.1e-21 74.3 0.1 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1929) Glyoxal_oxid_N PF07250.11 RKO87367.1 - 6.4e-07 28.8 3.2 0.12 11.5 0.0 4.3 3 2 0 3 3 3 2 Glyoxal oxidase N-terminus DUF2834 PF11196.8 RKO87368.1 - 2.1e-10 40.8 23.1 2.1e-06 28.0 7.5 3.7 2 1 0 2 2 2 2 Protein of unknown function (DUF2834) Tub_N PF16322.5 RKO87369.1 - 0.51 10.7 1.9 0.74 10.2 1.9 1.2 1 0 0 1 1 1 0 Tubby N-terminal bZIP_1 PF00170.21 RKO87370.1 - 1e-10 41.5 11.1 1.6e-10 40.9 11.1 1.3 1 0 0 1 1 1 1 bZIP transcription factor bZIP_2 PF07716.15 RKO87370.1 - 4.1e-05 23.6 17.3 6.2e-05 23.0 13.1 2.3 1 1 2 3 3 3 3 Basic region leucine zipper Shugoshin_N PF07558.11 RKO87370.1 - 0.0076 16.1 0.5 0.017 15.0 0.4 1.6 1 1 0 1 1 1 1 Shugoshin N-terminal coiled-coil region bZIP_Maf PF03131.17 RKO87370.1 - 0.13 12.8 8.5 0.21 12.1 8.5 1.3 1 0 0 1 1 1 0 bZIP Maf transcription factor DUF3552 PF12072.8 RKO87370.1 - 0.13 11.6 7.2 0.21 11.0 7.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) TMCO5 PF14992.6 RKO87370.1 - 0.26 10.8 4.1 0.39 10.3 4.1 1.1 1 0 0 1 1 1 0 TMCO5 family F-box-like PF12937.7 RKO87371.1 - 0.00072 19.4 0.2 0.0021 17.9 0.2 1.8 1 0 0 1 1 1 1 F-box-like MFS_1 PF07690.16 RKO87372.1 - 5.6e-10 38.7 7.4 6.5e-10 38.5 7.4 1.2 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO87372.1 - 1.8e-05 23.8 1.2 2e-05 23.7 1.2 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_3 PF05977.13 RKO87372.1 - 0.058 11.8 4.1 0.077 11.4 4.1 1.1 1 0 0 1 1 1 0 Transmembrane secretion effector MFS_1 PF07690.16 RKO87373.1 - 1e-08 34.6 6.6 1.1e-08 34.5 6.6 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_3 PF05977.13 RKO87373.1 - 0.0074 14.7 4.4 0.0092 14.4 4.4 1.1 1 0 0 1 1 1 1 Transmembrane secretion effector F-box-like PF12937.7 RKO87374.1 - 0.016 15.1 1.5 0.016 15.1 1.5 2.0 2 0 0 2 2 2 0 F-box-like LRR_4 PF12799.7 RKO87374.1 - 0.075 13.5 3.3 94 3.6 1.0 4.4 3 2 1 4 4 4 0 Leucine Rich repeats (2 copies) Peptidase_S30 PF01577.16 RKO87375.1 - 0.13 11.9 2.8 0.17 11.5 2.8 1.1 1 0 0 1 1 1 0 Potyvirus P1 protease Adap_comp_sub PF00928.21 RKO87376.1 - 9e-24 84.2 0.0 1.2e-23 83.9 0.0 1.0 1 0 0 1 1 1 1 Adaptor complexes medium subunit family Mitofilin PF09731.9 RKO87377.1 - 5.7e-65 220.4 14.7 6.3e-65 220.2 14.7 1.0 1 0 0 1 1 1 1 Mitochondrial inner membrane protein YlqD PF11068.8 RKO87377.1 - 0.11 12.9 0.8 0.21 12.0 0.8 1.5 1 0 0 1 1 1 0 YlqD protein HSCB_C PF07743.13 RKO87377.1 - 5.8 7.5 12.0 9.1 6.9 0.1 3.3 2 1 1 3 3 3 0 HSCB C-terminal oligomerisation domain HNH_2 PF13391.6 RKO87379.1 - 0.0013 18.8 0.0 0.0029 17.7 0.0 1.6 1 0 0 1 1 1 1 HNH endonuclease Rtf2 PF04641.12 RKO87380.1 - 4.7e-76 255.6 2.1 6.6e-76 255.1 2.1 1.3 1 1 0 1 1 1 1 Rtf2 RING-finger PTN13_u3 PF16599.5 RKO87380.1 - 0.018 15.1 1.7 0.031 14.3 1.7 1.4 1 0 0 1 1 1 0 Unstructured linker region on PTN13 protein between PDZ DUF2256 PF10013.9 RKO87380.1 - 0.035 14.2 0.2 0.24 11.6 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) FTCD_C PF04961.12 RKO87380.1 - 0.041 13.7 6.8 0.061 13.1 6.8 1.2 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase zf-NOSIP PF15906.5 RKO87380.1 - 0.048 13.8 0.0 0.11 12.7 0.0 1.6 1 0 0 1 1 1 0 Zinc-finger of nitric oxide synthase-interacting protein zf-Nse PF11789.8 RKO87380.1 - 0.053 13.4 0.0 2.9 7.8 0.0 2.5 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit DUF1822 PF08852.11 RKO87380.1 - 0.2 10.7 0.0 0.25 10.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1822) EF-1_beta_acid PF10587.9 RKO87380.1 - 0.42 11.1 13.1 0.69 10.4 6.9 3.0 2 0 0 2 2 2 0 Eukaryotic elongation factor 1 beta central acidic region Cwf_Cwc_15 PF04889.12 RKO87380.1 - 1.8 8.2 12.3 2.6 7.7 11.5 1.5 1 1 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Peptidase_S8 PF00082.22 RKO87382.1 - 1.4e-73 247.7 0.0 2.2e-73 247.2 0.0 1.2 1 0 0 1 1 1 1 Subtilase family CNRIP1 PF15043.6 RKO87382.1 - 0.00023 20.7 0.0 0.0004 20.0 0.0 1.3 1 0 0 1 1 1 1 CB1 cannabinoid receptor-interacting protein 1 DUF4307 PF14155.6 RKO87383.1 - 0.14 12.0 0.2 0.2 11.5 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) Tweety PF04906.13 RKO87385.1 - 0.04 12.6 0.7 2.3 6.8 0.0 2.2 1 1 1 2 2 2 0 Tweety RCC1 PF00415.18 RKO87386.1 - 1e-52 176.5 29.4 6.7e-10 39.4 0.2 6.8 7 0 0 7 7 7 6 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 RKO87386.1 - 3.7e-28 96.7 46.3 1e-06 28.4 0.1 7.1 7 0 0 7 7 7 6 Regulator of chromosome condensation (RCC1) repeat ODC_AZ PF02100.17 RKO87387.1 - 9.3e-10 38.5 0.0 1.6e-09 37.7 0.0 1.3 1 0 0 1 1 1 1 Ornithine decarboxylase antizyme DUF5463 PF17551.2 RKO87388.1 - 0.021 14.7 0.4 0.041 13.8 0.4 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5463) SHD1 PF03983.12 RKO87390.1 - 1.7e-25 88.6 0.0 1.8e-25 88.6 0.0 1.0 1 0 0 1 1 1 1 SLA1 homology domain 1, SHD1 Trp_leader2 PF08056.11 RKO87390.1 - 0.17 11.9 1.8 0.69 9.9 0.0 2.4 2 1 1 3 3 3 0 Tryptophan operon leader peptide Glyco_hydro_26 PF02156.15 RKO87391.1 - 0.0011 18.5 4.5 0.027 13.9 0.1 2.3 2 0 0 2 2 2 2 Glycosyl hydrolase family 26 EF-hand_5 PF13202.6 RKO87391.1 - 0.016 14.7 0.0 0.032 13.7 0.0 1.4 1 0 0 1 1 1 0 EF hand DUF4286 PF14114.6 RKO87392.1 - 9e-06 26.1 1.6 0.00011 22.6 1.6 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4286) Glucan_synthase PF02364.15 RKO87392.1 - 0.041 12.0 0.0 0.047 11.9 0.0 1.0 1 0 0 1 1 1 0 1,3-beta-glucan synthase component WD40 PF00400.32 RKO87394.1 - 0.0006 20.6 0.6 0.098 13.6 0.2 3.1 3 0 0 3 3 3 1 WD domain, G-beta repeat PD40 PF07676.12 RKO87394.1 - 0.0099 15.8 0.0 6.1 6.9 0.0 2.7 2 0 0 2 2 2 2 WD40-like Beta Propeller Repeat ANAPC4_WD40 PF12894.7 RKO87394.1 - 0.045 14.0 0.0 0.83 10.0 0.0 2.2 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain VWA PF00092.28 RKO87395.1 - 1.8e-19 70.6 0.0 3e-19 69.9 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 RKO87395.1 - 5.5e-16 58.9 0.0 9.9e-16 58.1 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 RKO87395.1 - 9.7e-15 55.1 0.1 2.2e-14 54.0 0.1 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 RKO87395.1 - 1.7e-08 34.1 1.1 3.3e-08 33.2 1.1 1.4 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein zf-RING_2 PF13639.6 RKO87395.1 - 2.5e-06 27.7 3.3 4.1e-06 27.0 3.3 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 RKO87395.1 - 0.0011 18.9 0.8 0.0011 18.9 0.8 2.0 1 1 1 2 2 2 1 RING-type zinc-finger DUF2201 PF09967.9 RKO87395.1 - 0.0019 18.3 0.4 0.0042 17.2 0.0 1.8 2 0 0 2 2 2 1 VWA-like domain (DUF2201) zf-C3HC4_3 PF13920.6 RKO87395.1 - 0.0047 16.8 1.9 0.0084 15.9 1.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 RKO87395.1 - 0.0077 16.2 1.9 0.013 15.5 1.9 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_11 PF17123.5 RKO87395.1 - 0.0081 15.9 0.7 0.019 14.7 0.7 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 RKO87395.1 - 0.0092 15.8 1.6 0.019 14.8 1.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 RKO87395.1 - 0.011 15.5 0.9 0.019 14.8 0.9 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-C3HC4 PF00097.25 RKO87395.1 - 0.026 14.4 2.9 0.049 13.5 2.9 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING-like PF08746.11 RKO87395.1 - 0.073 13.4 0.1 0.14 12.5 0.1 1.4 1 0 0 1 1 1 0 RING-like domain zf-P11 PF03854.14 RKO87395.1 - 4.5 7.0 6.8 15 5.4 1.2 2.3 2 0 0 2 2 2 0 P-11 zinc finger LSM PF01423.22 RKO87397.1 - 1.1e-14 53.9 0.1 4.2e-06 26.4 0.0 2.1 2 0 0 2 2 2 2 LSM domain SR-25 PF10500.9 RKO87398.1 - 2.3 7.8 20.8 0.99 9.0 11.3 2.5 2 1 0 2 2 2 0 Nuclear RNA-splicing-associated protein YccF PF03733.13 RKO87402.1 - 4.8e-10 40.0 33.4 1.2e-05 25.9 11.3 3.6 4 0 0 4 4 4 3 Inner membrane component domain Hexokinase_2 PF03727.16 RKO87403.1 - 1.2e-87 293.3 0.0 9.2e-87 290.4 0.0 1.9 2 0 0 2 2 2 1 Hexokinase Hexokinase_1 PF00349.21 RKO87403.1 - 1.6e-70 237.0 0.1 2.2e-70 236.6 0.1 1.2 1 0 0 1 1 1 1 Hexokinase S1-P1_nuclease PF02265.16 RKO87404.1 - 6.9e-06 26.1 0.1 9e-06 25.7 0.1 1.2 1 0 0 1 1 1 1 S1/P1 Nuclease PDDEXK_2 PF12784.7 RKO87405.1 - 0.00088 18.9 0.1 0.048 13.2 0.0 2.6 3 0 0 3 3 3 2 PD-(D/E)XK nuclease family transposase Creatinase_N_2 PF16189.5 RKO87406.1 - 3.5e-53 180.0 0.0 2.7e-52 177.1 0.0 2.3 3 0 0 3 3 3 1 Creatinase/Prolidase N-terminal domain Creatinase_N PF01321.18 RKO87406.1 - 1.5e-21 77.4 0.0 8.2e-18 65.3 0.0 2.3 2 0 0 2 2 2 2 Creatinase/Prolidase N-terminal domain Peptidase_M24 PF00557.24 RKO87406.1 - 0.0005 19.8 0.0 0.0012 18.5 0.0 1.7 2 0 0 2 2 2 1 Metallopeptidase family M24 SH3_1 PF00018.28 RKO87408.1 - 0.00023 20.7 0.0 0.00039 20.0 0.0 1.3 1 0 0 1 1 1 1 SH3 domain SH3_9 PF14604.6 RKO87408.1 - 0.031 14.1 0.0 0.091 12.6 0.0 1.8 2 0 0 2 2 2 0 Variant SH3 domain Kelch_2 PF07646.15 RKO87408.1 - 0.083 12.9 2.7 11 6.1 0.0 3.8 4 0 0 4 4 4 0 Kelch motif Kelch_5 PF13854.6 RKO87408.1 - 0.18 11.9 2.2 6.3 6.9 0.0 2.7 2 0 0 2 2 2 0 Kelch motif PQQ_3 PF13570.6 RKO87408.1 - 0.6 10.7 0.1 0.6 10.7 0.1 3.8 5 0 0 5 5 5 0 PQQ-like domain peroxidase PF00141.23 RKO87411.1 - 4.7e-09 36.3 0.0 8.9e-09 35.4 0.0 1.4 1 0 0 1 1 1 1 Peroxidase Asp PF00026.23 RKO87412.1 - 0.00094 18.7 0.3 0.0013 18.3 0.3 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease DUF4148 PF13663.6 RKO87412.1 - 0.066 13.4 1.9 0.11 12.7 1.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4148) PNRC PF15365.6 RKO87412.1 - 0.16 11.8 0.7 0.16 11.8 0.7 1.8 2 0 0 2 2 2 0 Proline-rich nuclear receptor coactivator motif GMC_oxred_N PF00732.19 RKO87413.1 - 1.3e-50 172.4 0.2 2.6e-50 171.5 0.1 1.5 2 0 0 2 2 2 1 GMC oxidoreductase GMC_oxred_C PF05199.13 RKO87413.1 - 2.1e-15 57.5 0.1 1.4e-14 54.8 0.0 2.2 2 0 0 2 2 2 1 GMC oxidoreductase FAD_binding_2 PF00890.24 RKO87413.1 - 2.5e-06 26.8 6.6 0.00061 19.0 3.9 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_binding_3 PF01494.19 RKO87413.1 - 0.00017 21.0 2.2 0.00027 20.3 1.2 1.7 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 RKO87413.1 - 0.00058 19.2 0.3 0.002 17.4 0.2 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 RKO87413.1 - 0.0013 18.4 0.7 0.0024 17.5 0.3 1.7 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA DAO PF01266.24 RKO87413.1 - 0.0047 16.6 12.6 0.1 12.2 12.6 2.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 RKO87413.1 - 0.0055 16.9 2.6 0.015 15.5 2.6 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 RKO87413.1 - 0.15 12.6 0.6 0.37 11.4 0.3 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 RKO87413.1 - 0.15 11.1 1.5 3 6.8 1.0 2.2 2 0 0 2 2 2 0 Lycopene cyclase protein 3HCDH_N PF02737.18 RKO87413.1 - 0.17 11.7 0.1 0.28 11.1 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Thi4 PF01946.17 RKO87413.1 - 0.23 10.7 1.1 0.62 9.3 0.3 2.0 2 0 0 2 2 2 0 Thi4 family HI0933_like PF03486.14 RKO87413.1 - 0.36 9.5 3.5 0.33 9.6 1.9 1.7 2 0 0 2 2 2 0 HI0933-like protein FAD_oxidored PF12831.7 RKO87413.1 - 1.5 8.1 4.7 2.3 7.5 4.7 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase HNH_2 PF13391.6 RKO87419.1 - 1.5e-05 25.0 0.0 3.1e-05 24.0 0.0 1.5 1 0 0 1 1 1 1 HNH endonuclease Adaptin_N PF01602.20 RKO87420.1 - 3.9e-86 289.7 0.0 5.1e-86 289.3 0.0 1.0 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 RKO87420.1 - 9.4e-17 61.5 1.0 6.6e-16 58.8 0.3 2.3 2 0 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 RKO87420.1 - 3.4e-07 30.6 2.3 0.026 14.9 0.0 4.4 4 2 2 6 6 5 3 HEAT repeats HEAT PF02985.22 RKO87420.1 - 0.00045 20.2 1.5 14 6.3 0.0 5.6 5 0 0 5 5 4 0 HEAT repeat Mpp10 PF04006.12 RKO87420.1 - 0.00071 18.2 26.3 0.001 17.6 26.3 1.1 1 0 0 1 1 1 1 Mpp10 protein CDC45 PF02724.14 RKO87420.1 - 0.006 14.9 23.0 0.0085 14.4 23.0 1.1 1 0 0 1 1 1 1 CDC45-like protein Nop14 PF04147.12 RKO87420.1 - 0.018 13.3 30.7 0.027 12.7 30.7 1.1 1 0 0 1 1 1 0 Nop14-like family Drc1-Sld2 PF11719.8 RKO87420.1 - 0.032 13.8 16.1 0.048 13.2 16.1 1.2 1 0 0 1 1 1 0 DNA replication and checkpoint protein ORC_WH_C PF18137.1 RKO87420.1 - 0.062 13.4 14.2 0.12 12.5 14.2 1.4 1 0 0 1 1 1 0 Origin recognition complex winged helix C-terminal Merozoite_SPAM PF07133.11 RKO87420.1 - 0.076 13.0 41.0 0.14 12.1 41.0 1.4 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) DNA_pol_phi PF04931.13 RKO87420.1 - 0.12 10.4 38.2 0.24 9.4 38.2 1.4 1 0 0 1 1 1 0 DNA polymerase phi Abhydrolase_3 PF07859.13 RKO87420.1 - 0.2 11.5 0.0 0.38 10.6 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold CPSF100_C PF13299.6 RKO87420.1 - 0.45 10.7 6.9 0.9 9.7 6.9 1.5 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal Prothymosin PF03247.14 RKO87420.1 - 0.62 10.5 44.1 1.3 9.5 44.1 1.4 1 0 0 1 1 1 0 Prothymosin/parathymosin family SAPS PF04499.15 RKO87420.1 - 1.1 8.0 10.9 1.7 7.4 10.9 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein RNA_pol_3_Rpc31 PF11705.8 RKO87420.1 - 1.1 9.4 36.2 0.1 12.9 31.2 1.8 2 0 0 2 2 1 0 DNA-directed RNA polymerase III subunit Rpc31 Afi1 PF07792.12 RKO87420.1 - 1.3 9.5 13.1 2.6 8.5 13.1 1.5 1 0 0 1 1 1 0 Docking domain of Afi1 for Arf3 in vesicle trafficking RR_TM4-6 PF06459.12 RKO87420.1 - 1.5 8.6 15.1 2.4 7.9 15.1 1.3 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 FAM60A PF15396.6 RKO87420.1 - 1.6 8.7 3.9 2.8 7.9 3.9 1.3 1 0 0 1 1 1 0 Protein Family FAM60A RNA_pol_Rpc4 PF05132.14 RKO87420.1 - 2.4 8.6 7.8 5.5 7.4 7.8 1.6 1 0 0 1 1 1 0 RNA polymerase III RPC4 DUF2457 PF10446.9 RKO87420.1 - 2.6 7.1 40.7 4 6.5 40.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) SDA1 PF05285.12 RKO87420.1 - 2.6 7.4 33.9 4.1 6.7 33.9 1.2 1 0 0 1 1 1 0 SDA1 Paf1 PF03985.13 RKO87420.1 - 2.6 6.9 28.1 3.9 6.4 28.1 1.2 1 0 0 1 1 1 0 Paf1 Pox_Ag35 PF03286.14 RKO87420.1 - 3.5 7.4 20.4 7.8 6.2 20.4 1.5 1 0 0 1 1 1 0 Pox virus Ag35 surface protein NPR3 PF03666.13 RKO87420.1 - 3.5 6.3 12.4 5.7 5.6 12.4 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Vfa1 PF08432.10 RKO87420.1 - 4 7.7 18.2 7.4 6.9 18.2 1.3 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DUF4746 PF15928.5 RKO87420.1 - 4.1 6.7 21.0 9.5 5.5 21.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Sigma70_ner PF04546.13 RKO87420.1 - 6.3 6.6 24.1 18 5.1 24.1 1.7 1 0 0 1 1 1 0 Sigma-70, non-essential region Cwf_Cwc_15 PF04889.12 RKO87420.1 - 7.1 6.3 28.9 15 5.2 28.9 1.5 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein SpoIIP PF07454.11 RKO87420.1 - 7.2 6.0 12.4 11 5.3 12.4 1.2 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) DUF913 PF06025.12 RKO87420.1 - 8.6 5.2 11.1 15 4.4 11.1 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF2722 PF10846.8 RKO87420.1 - 9.4 5.1 15.5 14 4.5 15.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2722) Peptidase_S24 PF00717.23 RKO87421.1 - 6.7e-10 38.8 0.0 1e-09 38.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase S24-like TPR_2 PF07719.17 RKO87422.1 - 1e-15 56.5 3.6 0.0022 18.0 0.5 4.5 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_1 PF00515.28 RKO87422.1 - 4.1e-12 45.4 2.6 0.021 14.6 0.0 4.4 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_14 PF13428.6 RKO87422.1 - 6.1e-07 29.7 4.2 0.74 10.8 0.0 4.6 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO87422.1 - 1.4e-06 28.8 2.3 0.27 11.9 0.2 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 RKO87422.1 - 4e-06 26.6 2.1 0.093 13.0 0.3 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 RKO87422.1 - 8.3e-06 25.4 0.1 0.0039 16.8 0.0 3.4 3 0 0 3 3 3 1 TPR repeat TPR_19 PF14559.6 RKO87422.1 - 0.00052 20.5 0.9 0.93 10.1 0.0 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 RKO87422.1 - 0.0067 16.4 0.9 8.7 6.6 0.0 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 RKO87422.1 - 0.084 13.2 7.2 7.1 7.0 1.9 3.7 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 RKO87422.1 - 0.47 11.2 5.3 0.38 11.5 1.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat SH3_1 PF00018.28 RKO87423.1 - 1.1e-08 34.6 0.0 1.8e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 RKO87423.1 - 6.5e-05 22.5 0.0 0.00011 21.8 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_9 PF14604.6 RKO87423.1 - 0.00021 21.1 0.0 0.00032 20.5 0.0 1.3 1 0 0 1 1 1 1 Variant SH3 domain DUF202 PF02656.15 RKO87423.1 - 0.002 18.5 4.4 0.0059 17.0 0.7 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF202) DUF5325 PF17259.2 RKO87423.1 - 0.21 11.5 5.6 0.23 11.4 0.7 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5325) Ribosomal_L19 PF01245.20 RKO87425.1 - 6.5e-15 55.0 0.0 7e-15 54.9 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L19 SPATA9 PF15824.5 RKO87427.1 - 0.071 12.4 0.1 0.12 11.7 0.1 1.2 1 0 0 1 1 1 0 Spermatogenesis-associated protein 9 Lipase_3 PF01764.25 RKO87428.1 - 5.6e-28 97.6 0.0 7.6e-28 97.2 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 RKO87428.1 - 2.2e-06 27.6 0.0 2.8e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 PGAP1-like protein Abhydrolase_1 PF00561.20 RKO87428.1 - 0.00011 21.9 0.0 0.00015 21.5 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 RKO87428.1 - 0.00024 20.4 0.0 0.00032 20.0 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO87428.1 - 0.0006 20.5 0.0 0.00063 20.4 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_3 PF07859.13 RKO87428.1 - 0.0058 16.5 0.0 0.008 16.1 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Thioesterase PF00975.20 RKO87428.1 - 0.0071 16.5 0.0 0.01 16.0 0.0 1.2 1 0 0 1 1 1 1 Thioesterase domain DUF676 PF05057.14 RKO87428.1 - 0.012 15.2 0.0 0.014 14.9 0.0 1.1 1 0 0 1 1 1 0 Putative serine esterase (DUF676) DUF2974 PF11187.8 RKO87428.1 - 0.018 14.6 0.1 0.05 13.2 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2974) DUF915 PF06028.11 RKO87428.1 - 0.02 14.2 0.1 0.031 13.6 0.1 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) DUF900 PF05990.12 RKO87428.1 - 0.047 13.2 0.0 0.066 12.7 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) MR_MLE_C PF13378.6 RKO87428.1 - 0.052 13.1 0.0 0.073 12.6 0.0 1.2 1 0 0 1 1 1 0 Enolase C-terminal domain-like Peptidase_S9 PF00326.21 RKO87428.1 - 0.056 12.9 0.0 0.071 12.6 0.0 1.2 1 0 0 1 1 1 0 Prolyl oligopeptidase family DLH PF01738.18 RKO87428.1 - 0.14 11.7 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Dienelactone hydrolase family Lipase_3 PF01764.25 RKO87429.1 - 4.2e-19 68.8 0.1 9.2e-19 67.7 0.0 1.6 2 0 0 2 2 2 1 Lipase (class 3) PGAP1 PF07819.13 RKO87429.1 - 2.8e-05 24.0 0.0 4.4e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 PGAP1-like protein Hydrolase_4 PF12146.8 RKO87429.1 - 0.00099 18.4 0.0 0.0021 17.4 0.0 1.5 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 RKO87429.1 - 0.0035 17.0 0.2 0.0071 16.0 0.0 1.6 2 0 0 2 2 2 1 alpha/beta hydrolase fold DUF2974 PF11187.8 RKO87429.1 - 0.0057 16.2 0.4 0.082 12.4 0.1 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF2974) DUF915 PF06028.11 RKO87429.1 - 0.0093 15.3 0.3 0.017 14.4 0.2 1.6 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF915) Abhydrolase_3 PF07859.13 RKO87429.1 - 0.01 15.7 0.1 0.043 13.7 0.0 2.0 2 0 0 2 2 2 0 alpha/beta hydrolase fold Thioesterase PF00975.20 RKO87429.1 - 0.012 15.8 0.0 0.024 14.8 0.0 1.5 1 0 0 1 1 1 0 Thioesterase domain Abhydrolase_6 PF12697.7 RKO87429.1 - 0.012 16.2 0.6 0.045 14.3 0.2 1.8 1 1 0 2 2 2 0 Alpha/beta hydrolase family DUF676 PF05057.14 RKO87429.1 - 0.022 14.3 0.0 0.034 13.7 0.0 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Lipase PF00151.19 RKO87429.1 - 0.048 13.0 0.3 0.079 12.2 0.3 1.3 1 0 0 1 1 1 0 Lipase Peptidase_S9 PF00326.21 RKO87429.1 - 0.068 12.6 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family DUF1691 PF07950.11 RKO87430.1 - 9.7e-11 42.4 1.4 1.9e-09 38.2 0.9 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF1691) Ferric_reduct PF01794.19 RKO87430.1 - 0.0027 17.8 10.2 0.0094 16.1 0.6 2.8 2 1 0 2 2 2 1 Ferric reductase like transmembrane component Sdh_cyt PF01127.22 RKO87430.1 - 0.0061 16.6 4.3 0.0061 16.6 4.3 2.1 2 0 0 2 2 2 1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7tm_1 PF00001.21 RKO87430.1 - 0.18 11.1 0.0 0.24 10.7 0.0 1.2 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) SKG6 PF08693.10 RKO87430.1 - 0.2 11.1 3.2 0.45 10.0 0.6 2.3 2 0 0 2 2 2 0 Transmembrane alpha-helix domain Ni_hydr_CYTB PF01292.20 RKO87430.1 - 6.6 6.3 11.0 5.9 6.5 4.3 3.2 1 1 1 2 2 2 0 Prokaryotic cytochrome b561 LRR_8 PF13855.6 RKO87431.1 - 3.2e-24 84.5 18.8 1.6e-09 37.4 1.3 3.2 2 1 2 4 4 4 4 Leucine rich repeat LRR_4 PF12799.7 RKO87431.1 - 2.2e-11 43.8 13.0 1.7e-05 25.1 0.4 3.5 1 1 3 4 4 4 3 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 RKO87431.1 - 0.00014 21.5 2.8 0.11 12.1 0.4 2.0 1 1 1 2 2 2 2 Leucine-rich repeat LRR_6 PF13516.6 RKO87431.1 - 0.00048 20.0 5.0 16 5.9 0.0 4.9 4 0 0 4 4 4 1 Leucine Rich repeat LRR_1 PF00560.33 RKO87431.1 - 0.0059 17.0 6.5 9.9 7.2 0.1 5.3 5 0 0 5 5 5 1 Leucine Rich Repeat Collagen PF01391.18 RKO87432.1 - 0.0056 16.4 4.9 0.012 15.4 4.9 1.5 1 0 0 1 1 1 1 Collagen triple helix repeat (20 copies) WD40 PF00400.32 RKO87435.1 - 1.4e-29 101.7 13.9 1.7e-05 25.5 0.0 6.3 6 0 0 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO87435.1 - 6.9e-18 64.7 2.5 1.4e-06 28.5 0.1 4.3 2 1 3 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 RKO87435.1 - 3.4e-09 36.9 0.2 0.0077 16.1 0.0 3.1 1 1 1 3 3 3 3 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 RKO87435.1 - 0.0004 19.5 0.7 0.077 11.9 0.1 3.0 2 1 0 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 RKO87435.1 - 0.02 13.5 0.0 0.039 12.6 0.0 1.4 1 0 0 1 1 1 0 Nucleoporin Nup120/160 WD40_like PF17005.5 RKO87435.1 - 0.069 12.5 0.0 0.83 8.9 0.0 2.2 2 1 0 2 2 2 0 WD40-like domain ELYS-bb PF16687.5 RKO87435.1 - 0.11 11.1 0.1 5.8 5.4 0.0 2.8 3 0 0 3 3 3 0 beta-propeller of ELYS nucleoporin Coatomer_WDAD PF04053.14 RKO87435.1 - 0.18 10.8 0.0 0.29 10.2 0.0 1.3 1 0 0 1 1 1 0 Coatomer WD associated region Tom7 PF08038.12 RKO87436.1 - 7e-10 38.4 3.8 1.9e-07 30.6 1.8 2.3 2 1 0 2 2 2 2 TOM7 family Beta-lactamase PF00144.24 RKO87440.1 - 4.6e-39 134.6 1.4 6.7e-39 134.0 1.4 1.2 1 0 0 1 1 1 1 Beta-lactamase DUF3471 PF11954.8 RKO87440.1 - 9.4e-06 26.0 0.0 0.00013 22.4 0.0 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF3471) Importin_rep PF18773.1 RKO87440.1 - 0.1 12.3 0.0 0.22 11.2 0.0 1.6 1 0 0 1 1 1 0 Importin 13 repeat DCP2 PF05026.13 RKO87441.1 - 1.4e-31 108.6 2.7 2.2e-31 108.0 2.7 1.3 1 0 0 1 1 1 1 Dcp2, box A domain NUDIX PF00293.28 RKO87441.1 - 8.3e-17 61.5 0.1 1.4e-16 60.7 0.1 1.3 1 0 0 1 1 1 1 NUDIX domain NUDIX_2 PF13869.6 RKO87441.1 - 0.088 12.4 0.0 0.25 10.9 0.0 1.6 1 1 1 2 2 2 0 Nucleotide hydrolase DUF5523 PF17661.1 RKO87442.1 - 9.1e-07 28.8 0.5 9.1e-07 28.8 0.5 3.5 3 1 1 4 4 4 1 Family of unknown function (DUF5523) p47_phox_C PF08944.11 RKO87442.1 - 1.2 8.7 6.2 4.3 6.8 0.5 2.6 2 0 0 2 2 2 0 NADPH oxidase subunit p47Phox, C terminal domain DUF4834 PF16118.5 RKO87443.1 - 0.24 12.4 0.5 0.67 11.0 0.5 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) PI3_PI4_kinase PF00454.27 RKO87446.1 - 3.2e-33 115.6 0.0 6.8e-32 111.2 0.0 2.0 1 1 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase DUF4135 PF13575.6 RKO87446.1 - 0.022 14.1 0.0 0.026 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) ArgoN PF16486.5 RKO87447.1 - 3.7e-22 79.4 0.0 6.2e-22 78.7 0.0 1.4 1 0 0 1 1 1 1 N-terminal domain of argonaute PAZ PF02170.22 RKO87447.1 - 1.2e-18 67.3 0.0 1.6e-18 66.8 0.0 1.2 1 0 0 1 1 1 1 PAZ domain ArgoL1 PF08699.10 RKO87447.1 - 4.8e-16 58.2 0.0 1.1e-15 57.0 0.0 1.7 1 0 0 1 1 1 1 Argonaute linker 1 domain ArgoMid PF16487.5 RKO87447.1 - 1.7e-13 50.6 0.0 3.9e-13 49.4 0.0 1.6 1 0 0 1 1 1 1 Mid domain of argonaute ArgoL2 PF16488.5 RKO87447.1 - 4.4e-10 39.7 0.0 1e-09 38.6 0.0 1.7 1 0 0 1 1 1 1 Argonaute linker 2 domain HutD PF05962.11 RKO87447.1 - 0.17 11.8 0.0 0.31 11.0 0.0 1.3 1 0 0 1 1 1 0 HutD SMN PF06003.12 RKO87448.1 - 9.5 5.4 13.1 5.7 6.1 11.2 1.6 1 1 0 1 1 1 0 Survival motor neuron protein (SMN) Aldedh PF00171.22 RKO87449.1 - 4.5e-183 609.0 0.1 5e-183 608.8 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 RKO87449.1 - 0.0025 16.9 0.0 0.0043 16.2 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) DUF1487 PF07368.11 RKO87449.1 - 0.028 13.9 0.0 0.13 11.7 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1487) CPSF100_C PF13299.6 RKO87450.1 - 4.5e-32 111.6 0.3 9e-31 107.3 0.0 2.5 2 1 0 2 2 2 1 Cleavage and polyadenylation factor 2 C-terminal RMMBL PF07521.12 RKO87450.1 - 2.8e-13 49.6 0.0 5.8e-13 48.6 0.0 1.5 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Beta-Casp PF10996.8 RKO87450.1 - 3.8e-08 33.6 0.0 7.3e-08 32.7 0.0 1.5 1 0 0 1 1 1 1 Beta-Casp domain T6SS_HCP PF05638.12 RKO87450.1 - 0.13 12.7 0.0 0.22 11.9 0.0 1.3 1 0 0 1 1 1 0 Type VI secretion system effector, Hcp CH PF00307.31 RKO87451.1 - 4.4e-71 236.0 3.4 4.7e-21 75.0 0.0 4.3 4 0 0 4 4 4 4 Calponin homology (CH) domain CAMSAP_CH PF11971.8 RKO87451.1 - 1.4e-05 24.9 0.0 0.015 15.2 0.0 2.8 2 0 0 2 2 2 2 CAMSAP CH domain CH_2 PF06294.11 RKO87451.1 - 0.035 14.2 0.2 2.9 8.1 0.0 3.3 3 0 0 3 3 3 0 CH-like domain in sperm protein Dak1 PF02733.17 RKO87451.1 - 0.088 11.7 0.2 0.14 11.1 0.2 1.2 1 0 0 1 1 1 0 Dak1 domain Aldo_ket_red PF00248.21 RKO87452.1 - 9.8e-19 67.6 0.0 1.1e-18 67.4 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family APH_6_hur PF04655.14 RKO87453.1 - 0.24 10.7 1.8 0.51 9.7 1.8 1.5 1 0 0 1 1 1 0 Aminoglycoside/hydroxyurea antibiotic resistance kinase VSP PF03302.13 RKO87453.1 - 4 6.2 5.1 7.1 5.4 5.1 1.3 1 0 0 1 1 1 0 Giardia variant-specific surface protein DUF3421 PF11901.8 RKO87454.1 - 7.5e-33 112.9 0.2 1.5e-21 76.5 0.0 2.8 1 1 2 3 3 3 3 Protein of unknown function (DUF3421) TPR_12 PF13424.6 RKO87455.1 - 3e-07 30.7 5.2 0.0001 22.5 1.9 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat SHNi-TPR PF10516.9 RKO87455.1 - 0.00059 19.2 0.1 0.0014 18.0 0.1 1.6 1 0 0 1 1 1 1 SHNi-TPR TPR_8 PF13181.6 RKO87455.1 - 0.012 15.8 0.8 6.5 7.2 0.0 3.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 RKO87455.1 - 0.033 14.3 11.4 0.17 12.1 0.0 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_19 PF14559.6 RKO87455.1 - 0.036 14.6 8.5 1.2 9.6 0.0 3.5 2 1 1 3 3 3 0 Tetratricopeptide repeat Seryl_tRNA_N PF02403.22 RKO87455.1 - 0.051 13.8 5.6 0.068 13.4 4.6 1.8 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain PknG_rubred PF16919.5 RKO87455.1 - 0.078 13.1 0.4 0.21 11.7 0.4 1.8 1 0 0 1 1 1 0 Protein kinase G rubredoxin domain MafB PF06255.13 RKO87455.1 - 0.29 10.5 2.0 0.41 10.0 2.0 1.2 1 0 0 1 1 1 0 Neisseria toxin MafB Spc7 PF08317.11 RKO87455.1 - 0.77 8.6 7.2 1.1 8.0 7.2 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein CLZ PF16526.5 RKO87455.1 - 0.98 9.8 8.7 2.8 8.4 0.4 3.4 1 1 2 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels TPR_14 PF13428.6 RKO87455.1 - 2.9 9.0 8.1 19 6.4 1.2 3.6 3 0 0 3 3 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO87455.1 - 9.8 6.9 15.4 5.5 7.7 6.1 4.3 3 2 0 3 3 3 0 Tetratricopeptide repeat DUF1640 PF07798.11 RKO87456.1 - 2.1e-06 27.9 0.0 2.5e-06 27.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) Chorion_3 PF05387.11 RKO87456.1 - 0.17 11.5 2.8 0.18 11.4 2.8 1.1 1 0 0 1 1 1 0 Chorion family 3 PRIMA1 PF16101.5 RKO87456.1 - 9 6.4 6.7 13 5.8 6.7 1.2 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 IDO PF01231.18 RKO87458.1 - 2.5e-127 425.3 0.0 2.9e-127 425.1 0.0 1.0 1 0 0 1 1 1 1 Indoleamine 2,3-dioxygenase ATG16 PF08614.11 RKO87458.1 - 0.031 14.5 0.2 0.043 14.0 0.2 1.1 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Cytochrom_C550 PF14495.6 RKO87458.1 - 0.075 12.7 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 Cytochrome c-550 domain ASL_C PF08328.11 RKO87458.1 - 0.14 12.2 0.0 0.31 11.1 0.0 1.5 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminal Sdh5 PF03937.16 RKO87460.1 - 1.5e-25 88.9 0.1 2e-25 88.5 0.1 1.2 1 0 0 1 1 1 1 Flavinator of succinate dehydrogenase Thioredoxin PF00085.20 RKO87461.1 - 1e-21 76.8 0.0 1e-21 76.8 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 RKO87461.1 - 1.5e-06 28.6 0.0 1.9e-05 25.1 0.0 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 RKO87461.1 - 3.9e-06 27.1 0.0 0.00081 19.7 0.0 2.0 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_7 PF13899.6 RKO87461.1 - 0.00015 21.9 0.1 0.00043 20.4 0.1 1.7 1 1 0 1 1 1 1 Thioredoxin-like AhpC-TSA PF00578.21 RKO87461.1 - 0.0011 18.9 0.1 0.0021 18.0 0.1 1.4 1 1 0 1 1 1 1 AhpC/TSA family Thioredoxin_9 PF14595.6 RKO87461.1 - 0.0029 17.4 0.0 0.0033 17.2 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 RKO87461.1 - 0.035 13.5 0.0 0.043 13.2 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 RKO87461.1 - 0.069 13.2 0.0 0.082 13.0 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin domain DNA_pol3_delta2 PF13177.6 RKO87462.1 - 9.9e-10 38.4 0.0 2.1e-09 37.4 0.0 1.5 1 1 0 1 1 1 1 DNA polymerase III, delta subunit AAA PF00004.29 RKO87462.1 - 1.1e-08 35.6 0.0 2e-08 34.7 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 RKO87462.1 - 7.2e-05 22.8 0.0 0.00012 22.0 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 RKO87462.1 - 9.6e-05 22.8 0.1 0.0011 19.4 0.0 2.3 2 1 0 2 2 2 1 AAA ATPase domain Rep_fac_C PF08542.11 RKO87462.1 - 0.00041 20.7 0.1 0.0016 18.8 0.0 2.0 2 0 0 2 2 2 1 Replication factor C C-terminal domain AAA_22 PF13401.6 RKO87462.1 - 0.014 15.7 0.1 0.083 13.2 0.1 2.2 2 1 0 2 2 2 0 AAA domain AAA_11 PF13086.6 RKO87462.1 - 0.021 14.6 0.0 0.053 13.3 0.0 1.7 1 1 0 1 1 1 0 AAA domain RuvB_N PF05496.12 RKO87462.1 - 0.028 14.2 0.0 0.082 12.6 0.0 1.8 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain AAA_24 PF13479.6 RKO87462.1 - 0.068 12.9 0.1 0.19 11.5 0.1 1.6 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.9 RKO87462.1 - 0.12 11.6 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AFG1_ATPase PF03969.16 RKO87464.1 - 2.8e-71 240.3 0.0 2.5e-49 168.1 0.0 3.1 3 0 0 3 3 3 3 AFG1-like ATPase AAA_16 PF13191.6 RKO87464.1 - 0.0013 19.1 0.3 0.16 12.4 0.3 2.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 RKO87464.1 - 0.043 13.8 0.0 0.089 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 RKO87464.1 - 0.17 12.2 0.0 0.44 10.8 0.0 1.6 1 1 0 1 1 1 0 AAA domain LRR_4 PF12799.7 RKO87465.1 - 9.1e-16 57.7 5.8 3.7e-07 30.3 0.5 4.8 3 3 0 4 4 4 3 Leucine Rich repeats (2 copies) CAP_GLY PF01302.25 RKO87465.1 - 1.2e-14 54.1 0.0 2.2e-14 53.2 0.0 1.4 1 0 0 1 1 1 1 CAP-Gly domain LRR_8 PF13855.6 RKO87465.1 - 7.8e-14 51.2 15.0 2.1e-07 30.6 4.2 4.4 3 2 1 4 4 4 3 Leucine rich repeat LRR_9 PF14580.6 RKO87465.1 - 9.5e-05 22.0 0.0 0.0012 18.3 0.0 2.3 2 0 0 2 2 2 1 Leucine-rich repeat LRR_6 PF13516.6 RKO87465.1 - 0.00031 20.5 8.1 0.55 10.4 0.1 5.2 5 0 0 5 5 5 2 Leucine Rich repeat LRR_1 PF00560.33 RKO87465.1 - 0.0021 18.3 8.1 35 5.5 0.0 6.2 6 1 0 6 6 6 0 Leucine Rich Repeat Ubiquitin_2 PF14560.6 RKO87465.1 - 0.0028 18.1 0.0 0.0057 17.1 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin-like domain DUF2190 PF09956.9 RKO87466.1 - 0.036 14.6 0.1 0.13 12.8 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2190) PRMT5_C PF17286.2 RKO87467.1 - 0.0085 16.0 0.0 0.0098 15.8 0.0 1.2 1 0 0 1 1 1 1 PRMT5 oligomerisation domain SH3_1 PF00018.28 RKO87468.1 - 1.6e-12 46.9 0.1 2.6e-12 46.1 0.1 1.4 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 RKO87468.1 - 2.8e-10 39.7 0.0 5.4e-10 38.8 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_9 PF14604.6 RKO87468.1 - 3.3e-10 39.6 0.0 5.1e-10 39.1 0.0 1.3 1 0 0 1 1 1 1 Variant SH3 domain DEAD PF00270.29 RKO87469.1 - 4.5e-06 26.5 0.0 5e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO87469.1 - 0.11 12.8 0.0 0.13 12.6 0.0 1.0 1 0 0 1 1 1 0 Helicase conserved C-terminal domain DUF1611 PF07755.11 RKO87469.1 - 0.13 11.5 0.0 0.15 11.3 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain ANF_receptor PF01094.28 RKO87471.1 - 4.7e-14 52.3 0.0 6.5e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_6 PF13458.6 RKO87471.1 - 3.4e-06 27.0 0.0 5.5e-06 26.3 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein Kelch_3 PF13415.6 RKO87473.1 - 1.3e-16 60.4 19.9 5.3e-06 26.6 0.0 5.3 6 0 0 6 6 6 3 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO87473.1 - 1.7e-14 53.4 0.1 0.00024 21.0 0.0 3.8 3 0 0 3 3 3 3 Kelch motif Kelch_4 PF13418.6 RKO87473.1 - 4.2e-14 52.3 3.6 1.7e-05 24.8 0.0 4.0 3 1 0 3 3 3 3 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO87473.1 - 6.1e-13 48.5 3.3 0.00017 21.8 0.0 4.8 4 0 0 4 4 4 3 Kelch motif Kelch_1 PF01344.25 RKO87473.1 - 5.5e-06 25.9 0.2 0.0011 18.5 0.0 3.2 3 0 0 3 3 3 1 Kelch motif Kelch_2 PF07646.15 RKO87473.1 - 1.2e-05 25.1 0.3 0.00081 19.3 0.0 3.3 4 0 0 4 4 4 1 Kelch motif Mito_carr PF00153.27 RKO87474.1 - 1.3e-53 178.9 1.8 1.1e-18 67.0 0.3 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein G3P_acyltransf PF02660.15 RKO87474.1 - 0.0069 16.5 1.6 0.1 12.6 0.1 2.3 1 1 1 2 2 2 2 Glycerol-3-phosphate acyltransferase Pkinase PF00069.25 RKO87475.1 - 2.5e-63 213.9 0.0 3.5e-63 213.5 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO87475.1 - 1e-33 116.7 0.0 1.5e-33 116.2 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase HR1 PF02185.16 RKO87475.1 - 1.1e-20 73.5 5.1 4.5e-10 39.5 3.1 2.4 2 0 0 2 2 2 2 Hr1 repeat C1_1 PF00130.22 RKO87475.1 - 4.6e-19 68.0 22.7 7.4e-12 45.0 5.4 2.4 2 0 0 2 2 2 2 Phorbol esters/diacylglycerol binding domain (C1 domain) C1_2 PF03107.16 RKO87475.1 - 7e-06 26.3 12.5 0.0073 16.6 4.0 2.6 2 0 0 2 2 2 2 C1 domain Uds1 PF15456.6 RKO87475.1 - 7.2e-06 26.2 4.9 0.0076 16.4 0.4 2.6 2 0 0 2 2 2 2 Up-regulated During Septation Haspin_kinase PF12330.8 RKO87475.1 - 0.0054 15.7 0.1 0.0091 15.0 0.1 1.2 1 0 0 1 1 1 1 Haspin like kinase domain PHD PF00628.29 RKO87475.1 - 0.7 9.8 18.5 0.82 9.6 4.4 2.5 2 0 0 2 2 2 0 PHD-finger Zf_RING PF16744.5 RKO87475.1 - 1.7 8.8 11.5 0.33 11.1 2.0 2.6 2 0 0 2 2 2 0 KIAA1045 RING finger Prok-RING_1 PF14446.6 RKO87475.1 - 1.9 8.5 17.1 3.5 7.6 4.1 2.5 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 DUF1062 PF06353.12 RKO87475.1 - 3 8.6 4.3 0.88 10.4 0.4 2.1 2 0 0 2 2 1 0 Protein of unknown function (DUF1062) DZR PF12773.7 RKO87475.1 - 3.2 7.9 15.1 0.34 11.0 2.8 2.6 2 0 0 2 2 2 0 Double zinc ribbon PHD_2 PF13831.6 RKO87475.1 - 9.8 5.8 14.9 0.3 10.7 4.6 2.7 2 0 0 2 2 2 0 PHD-finger RNA_pol_L_2 PF13656.6 RKO87476.1 - 1.3e-32 111.3 0.1 1.7e-32 111.0 0.1 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 RKO87476.1 - 1.7e-15 56.2 0.0 2.6e-15 55.6 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain PIH1_CS PF18201.1 RKO87477.1 - 5.6e-08 33.1 0.0 9.5e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 PIH1 CS-like domain eIF-3c_N PF05470.12 RKO87477.1 - 0.0073 14.7 0.9 0.0075 14.6 0.9 1.1 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit 8 N-terminus CDC45 PF02724.14 RKO87477.1 - 0.014 13.7 11.3 0.018 13.3 11.3 1.1 1 0 0 1 1 1 0 CDC45-like protein Pox_Ag35 PF03286.14 RKO87477.1 - 0.091 12.5 17.8 0.21 11.3 17.8 1.6 1 0 0 1 1 1 0 Pox virus Ag35 surface protein SDA1 PF05285.12 RKO87477.1 - 0.31 10.4 13.7 0.47 9.8 13.7 1.3 1 0 0 1 1 1 0 SDA1 DNA_pol_phi PF04931.13 RKO87477.1 - 0.57 8.2 19.4 0.73 7.9 19.4 1.1 1 0 0 1 1 1 0 DNA polymerase phi Apt1 PF10351.9 RKO87477.1 - 0.76 8.6 5.1 0.85 8.4 5.1 1.2 1 0 0 1 1 1 0 Golgi-body localisation protein domain CobT PF06213.12 RKO87477.1 - 1.3 8.4 14.3 2.1 7.6 14.3 1.4 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT BUD22 PF09073.10 RKO87477.1 - 1.3 8.3 20.8 2.1 7.6 20.8 1.3 1 0 0 1 1 1 0 BUD22 Nop14 PF04147.12 RKO87477.1 - 2.8 6.1 16.6 3.7 5.6 16.6 1.1 1 0 0 1 1 1 0 Nop14-like family NOA36 PF06524.12 RKO87477.1 - 3.5 6.9 16.5 5.5 6.2 16.5 1.2 1 0 0 1 1 1 0 NOA36 protein Cwf_Cwc_15 PF04889.12 RKO87477.1 - 5.1 6.8 23.1 6.8 6.3 21.6 1.9 2 0 0 2 2 2 0 Cwf15/Cwc15 cell cycle control protein Herpes_LMP1 PF05297.11 RKO87477.1 - 5.5 6.1 12.6 7.6 5.6 12.6 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DUF4637 PF15470.6 RKO87477.1 - 6.6 6.4 9.9 15 5.2 9.9 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) RXT2_N PF08595.11 RKO87477.1 - 9 6.3 10.2 17 5.4 10.2 1.5 1 0 0 1 1 1 0 RXT2-like, N-terminal Sigma70_ner PF04546.13 RKO87477.1 - 9.3 6.1 16.9 16 5.3 16.9 1.3 1 0 0 1 1 1 0 Sigma-70, non-essential region Atg14 PF10186.9 RKO87478.1 - 0.063 12.4 15.5 0.083 12.0 15.5 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 eIF-4B PF06273.11 RKO87478.1 - 0.14 11.2 6.9 0.19 10.7 6.9 1.2 1 0 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B MRP-L46 PF11788.8 RKO87478.1 - 0.54 11.0 15.8 0.18 12.5 10.4 2.6 1 1 1 2 2 2 0 39S mitochondrial ribosomal protein L46 tRNA-synt_His PF13393.6 RKO87478.1 - 0.67 9.2 9.5 0.036 13.3 1.1 2.0 1 1 1 2 2 2 0 Histidyl-tRNA synthetase DUF4618 PF15397.6 RKO87478.1 - 1.4 8.3 22.2 2.3 7.5 22.2 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) Phage_Mu_Gam PF07352.12 RKO87478.1 - 2.6 7.9 14.2 0.41 10.5 7.7 2.3 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein Vac7 PF12751.7 RKO87479.1 - 9 5.6 6.3 0.35 10.3 0.2 1.6 2 0 0 2 2 2 0 Vacuolar segregation subunit 7 Cyclin_N PF00134.23 RKO87480.1 - 2.1e-05 24.3 0.0 3e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Cyclin, N-terminal domain PRIMA1 PF16101.5 RKO87480.1 - 0.0065 16.5 0.2 0.0065 16.5 0.2 3.1 3 0 0 3 3 3 1 Proline-rich membrane anchor 1 F-box-like PF12937.7 RKO87484.1 - 1e-06 28.5 1.1 1.9e-06 27.6 1.1 1.4 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO87484.1 - 0.065 13.1 0.8 0.065 13.1 0.8 2.1 2 0 0 2 2 2 0 F-box domain Piwi PF02171.17 RKO87485.1 - 1.8e-84 283.6 0.0 1.9e-84 283.5 0.0 1.0 1 0 0 1 1 1 1 Piwi domain Hydrolase_6 PF13344.6 RKO87486.1 - 2.5e-07 30.7 0.0 4.2e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase DUF5592 PF17332.2 RKO87487.1 - 0.14 12.7 0.1 0.24 12.0 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5592) F-box-like PF12937.7 RKO87488.1 - 0.036 14.0 0.3 0.11 12.4 0.3 1.9 1 0 0 1 1 1 0 F-box-like PMSR PF01625.21 RKO87489.1 - 1.1e-09 38.7 0.1 1.3e-09 38.4 0.1 1.1 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase PMSR PF01625.21 RKO87490.1 - 6.1e-23 81.7 0.0 6.6e-23 81.6 0.0 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase Histone PF00125.24 RKO87491.1 - 3.7e-22 79.1 0.3 5.2e-22 78.6 0.3 1.3 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 RKO87491.1 - 9.6e-07 29.0 0.0 9.6e-07 29.0 0.0 1.8 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID_20kDa PF03847.13 RKO87491.1 - 0.0017 18.8 0.0 0.0032 17.9 0.0 1.4 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A YscO-like PF16789.5 RKO87491.1 - 0.036 14.1 0.2 0.05 13.6 0.2 1.2 1 0 0 1 1 1 0 YscO-like protein BTB_2 PF02214.22 RKO87494.1 - 3.1e-12 46.7 0.0 6.6e-12 45.6 0.0 1.5 1 0 0 1 1 1 1 BTB/POZ domain DUF383 PF04063.14 RKO87495.1 - 8.4e-59 198.4 0.0 2.4e-58 196.9 0.0 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF383) DUF384 PF04064.13 RKO87495.1 - 2.7e-19 68.8 0.2 6e-19 67.6 0.2 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF384) LIAS_N PF16881.5 RKO87497.1 - 5.9e-26 91.0 0.0 8.6e-26 90.5 0.0 1.2 1 0 0 1 1 1 1 N-terminal domain of lipoyl synthase of Radical_SAM family Radical_SAM PF04055.21 RKO87497.1 - 3.1e-05 24.4 0.0 5.2e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Sugar_tr PF00083.24 RKO87499.1 - 3.8e-44 151.3 9.8 1.2e-23 83.7 2.9 2.1 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 RKO87499.1 - 4.6e-24 85.0 43.1 1e-20 74.0 26.3 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily PTR2 PF00854.21 RKO87499.1 - 0.00038 19.4 3.3 0.0017 17.2 0.5 2.7 2 1 1 3 3 3 1 POT family MFS_2 PF13347.6 RKO87499.1 - 0.00046 18.9 2.1 0.00046 18.9 2.1 3.2 1 1 1 2 2 2 2 MFS/sugar transport protein DUF2568 PF10823.8 RKO87499.1 - 0.34 11.2 4.0 0.17 12.2 0.4 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2568) Aldedh PF00171.22 RKO87500.1 - 6.9e-10 38.0 1.3 2.5e-06 26.3 0.0 2.0 2 0 0 2 2 2 2 Aldehyde dehydrogenase family FliC_SP PF12613.8 RKO87500.1 - 0.07 13.7 3.9 0.16 12.5 3.9 1.5 1 0 0 1 1 1 0 Flagellin structural protein PGM_PMM_I PF02878.16 RKO87501.1 - 8e-40 135.7 0.0 1.7e-39 134.7 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 RKO87501.1 - 1.4e-16 61.0 0.0 2.4e-16 60.2 0.0 1.3 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Mg_trans_NIPA PF05653.14 RKO87502.1 - 7.4e-41 140.2 9.8 8.2e-41 140.0 9.8 1.0 1 0 0 1 1 1 1 Magnesium transporter NIPA EamA PF00892.20 RKO87502.1 - 0.0021 18.2 2.8 0.0021 18.2 2.8 3.3 2 1 1 3 3 3 1 EamA-like transporter family DUF4131 PF13567.6 RKO87502.1 - 5.6 6.6 9.8 3.8 7.1 0.1 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4131) Pkinase PF00069.25 RKO87503.1 - 7.5e-43 146.8 0.0 1.7e-35 122.7 0.0 2.4 2 1 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 RKO87503.1 - 1.3e-17 63.9 0.0 5e-17 62.0 0.0 1.7 1 1 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 RKO87503.1 - 7.4e-06 25.5 0.0 1e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 RKO87503.1 - 3.2e-05 23.4 0.1 0.0002 20.8 0.1 1.9 1 1 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 RKO87503.1 - 0.0002 20.4 0.0 0.00057 18.9 0.0 1.6 2 0 0 2 2 2 1 Haspin like kinase domain APH PF01636.23 RKO87503.1 - 0.00084 19.3 0.0 0.0015 18.5 0.0 1.5 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 RKO87503.1 - 0.033 13.0 0.0 0.073 11.8 0.0 1.5 2 0 0 2 2 2 0 Fungal protein kinase RIO1 PF01163.22 RKO87503.1 - 0.12 12.0 0.0 0.18 11.4 0.0 1.2 1 0 0 1 1 1 0 RIO1 family NOG1_N PF17835.1 RKO87504.1 - 0.28 11.1 0.0 0.48 10.4 0.0 1.3 1 0 0 1 1 1 0 NOG1 N-terminal helical domain NOA36 PF06524.12 RKO87507.1 - 3.1 7.0 8.4 3.6 6.8 8.4 1.1 1 0 0 1 1 1 0 NOA36 protein DUF3507 PF12015.8 RKO87509.1 - 0.044 13.5 0.0 0.053 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3507) Tmemb_40 PF10160.9 RKO87510.1 - 0.16 11.4 0.1 0.27 10.7 0.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein Nucleoporin2 PF04096.14 RKO87511.1 - 9.3e-37 126.4 0.0 1.1e-36 126.2 0.0 1.0 1 0 0 1 1 1 1 Nucleoporin autopeptidase FAA_hydrolase PF01557.18 RKO87512.1 - 2.7e-26 92.6 0.1 3.1e-26 92.4 0.1 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family zf-C2H2 PF00096.26 RKO87514.1 - 5.1e-16 58.1 15.1 1e-05 25.7 0.5 3.1 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO87514.1 - 5.5e-13 48.5 13.5 0.00012 22.6 3.0 3.1 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO87514.1 - 5e-11 42.5 8.8 7.5e-09 35.6 2.3 3.6 4 0 0 4 4 4 2 Zinc-finger double domain zf-met PF12874.7 RKO87514.1 - 1.7e-06 28.2 5.8 0.13 12.7 0.0 3.2 3 0 0 3 3 3 3 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 RKO87514.1 - 3.1e-05 24.1 6.9 0.082 13.2 0.1 3.1 3 0 0 3 3 3 2 Zinc-finger double-stranded RNA-binding zf-MYST PF17772.1 RKO87514.1 - 0.0022 17.5 3.9 0.18 11.4 0.1 2.5 1 1 1 2 2 2 2 MYST family zinc finger domain zf-C2H2_8 PF15909.5 RKO87514.1 - 0.0048 17.2 5.8 0.012 15.9 5.8 1.6 1 1 0 1 1 1 1 C2H2-type zinc ribbon C1_4 PF07975.12 RKO87514.1 - 0.0059 16.8 6.9 0.34 11.2 7.2 2.3 1 1 2 3 3 3 1 TFIIH C1-like domain zf-C2H2_3rep PF18868.1 RKO87514.1 - 0.02 15.5 2.7 0.041 14.5 0.4 2.0 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats zf-C2H2_2 PF12756.7 RKO87514.1 - 0.037 14.4 3.6 3.6 8.0 0.2 2.4 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) LIM PF00412.22 RKO87514.1 - 0.046 14.0 5.2 0.22 11.8 4.3 2.2 1 1 1 2 2 2 0 LIM domain ATPase-cat_bd PF12156.8 RKO87514.1 - 0.052 14.3 4.9 0.46 11.3 2.3 2.1 2 0 0 2 2 2 0 Putative metal-binding domain of cation transport ATPase zf-CHY PF05495.12 RKO87514.1 - 0.097 13.2 7.9 0.1 13.1 7.0 1.6 1 1 1 2 2 2 0 CHY zinc finger zf-BED PF02892.15 RKO87514.1 - 0.11 12.6 4.6 3.1 7.9 1.8 2.7 1 1 2 3 3 3 0 BED zinc finger C1_2 PF03107.16 RKO87514.1 - 0.16 12.4 8.9 0.17 12.2 1.0 2.5 1 1 2 3 3 3 0 C1 domain IBR PF01485.21 RKO87514.1 - 0.21 11.8 7.7 2.7 8.3 7.7 2.0 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain zf-AN1 PF01428.16 RKO87514.1 - 0.33 11.1 11.0 2.2 8.5 4.9 3.0 1 1 1 2 2 2 0 AN1-like Zinc finger Prok-RING_1 PF14446.6 RKO87514.1 - 0.5 10.3 5.3 4.6 7.2 0.1 2.6 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 zf-C2H2_6 PF13912.6 RKO87514.1 - 0.62 10.1 0.0 0.62 10.1 0.0 3.3 3 1 0 3 3 3 0 C2H2-type zinc finger OrsD PF12013.8 RKO87514.1 - 1.4 9.4 8.0 2 8.9 0.2 2.6 2 1 0 2 2 2 0 Orsellinic acid/F9775 biosynthesis cluster protein D C5HCH PF17982.1 RKO87514.1 - 1.7 8.8 11.0 0.24 11.6 5.5 2.3 2 1 1 3 3 3 0 NSD Cys-His rich domain zf-H2C2_5 PF13909.6 RKO87514.1 - 1.8 8.4 13.7 1 9.2 1.7 3.5 4 0 0 4 4 4 0 C2H2-type zinc-finger domain zf-Di19 PF05605.12 RKO87514.1 - 2.4 8.5 9.5 0.16 12.3 3.6 1.9 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zf-LYAR PF08790.11 RKO87514.1 - 4.6 7.2 7.4 34 4.5 0.0 3.2 3 1 0 3 3 3 0 LYAR-type C2HC zinc finger ubiquitin PF00240.23 RKO87515.1 - 1.4e-10 40.8 0.1 2.1e-09 37.0 0.1 2.2 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 RKO87515.1 - 4.2e-05 23.3 0.2 0.00012 21.8 0.1 1.8 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like Abhydrolase_1 PF00561.20 RKO87516.1 - 0.084 12.5 0.0 0.098 12.3 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold Chitin_synth_1 PF01644.17 RKO87517.1 - 1.3e-49 168.3 0.0 2.1e-49 167.6 0.0 1.3 1 0 0 1 1 1 1 Chitin synthase Chitin_synth_2 PF03142.15 RKO87517.1 - 1.5e-24 86.5 0.3 1.6e-20 73.2 0.0 2.1 2 0 0 2 2 2 2 Chitin synthase Glyco_trans_2_3 PF13632.6 RKO87517.1 - 8.1e-07 29.1 4.1 8.1e-06 25.9 4.1 2.3 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 RKO87517.1 - 0.0007 19.5 0.0 0.0015 18.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Vps8 PF12816.7 RKO87519.1 - 1.3e-42 145.6 0.0 3e-40 137.8 0.0 2.4 2 0 0 2 2 2 2 Golgi CORVET complex core vacuolar protein 8 Clathrin PF00637.20 RKO87519.1 - 2.4e-05 24.2 0.0 0.29 11.0 0.0 3.2 3 0 0 3 3 3 2 Region in Clathrin and VPS WD40 PF00400.32 RKO87519.1 - 0.00018 22.2 0.0 0.00092 20.0 0.0 2.3 1 0 0 1 1 1 1 WD domain, G-beta repeat zf-rbx1 PF12678.7 RKO87519.1 - 0.0035 17.6 0.2 0.008 16.4 0.2 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain ANAPC4_WD40 PF12894.7 RKO87519.1 - 0.039 14.3 0.1 2.4 8.5 0.0 2.5 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain zf-C3HC4_2 PF13923.6 RKO87519.1 - 0.059 13.2 0.0 0.19 11.6 0.0 1.8 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 RKO87519.1 - 0.073 12.8 0.1 0.22 11.3 0.1 1.9 1 0 0 1 1 1 0 RING-like zinc finger zf-RING_UBOX PF13445.6 RKO87519.1 - 0.13 12.3 0.1 0.57 10.2 0.0 2.1 2 0 0 2 2 2 0 RING-type zinc-finger zf-RING_5 PF14634.6 RKO87519.1 - 4.8 7.2 6.5 0.22 11.5 0.2 2.1 2 0 0 2 2 2 0 zinc-RING finger domain PHD PF00628.29 RKO87519.1 - 6.5 6.7 6.1 2.3 8.1 0.6 2.7 2 1 0 2 2 2 0 PHD-finger CHAD PF05235.14 RKO87521.1 - 1.3e-40 139.8 27.5 2.2e-40 139.0 27.5 1.3 1 0 0 1 1 1 1 CHAD domain CYTH PF01928.21 RKO87521.1 - 2.5e-09 37.3 0.0 5.9e-09 36.1 0.0 1.7 1 0 0 1 1 1 1 CYTH domain PRiA4_ORF3 PF07929.11 RKO87522.1 - 8.1e-55 185.2 0.0 9.9e-55 184.9 0.0 1.1 1 0 0 1 1 1 1 Plasmid pRiA4b ORF-3-like protein Dopey_N PF04118.14 RKO87523.1 - 3.5e-109 364.6 0.0 5.5e-109 364.0 0.0 1.3 1 0 0 1 1 1 1 Dopey, N-terminal Prenyltrans PF00432.21 RKO87524.1 - 2.5e-33 113.5 3.6 6.9e-12 44.9 0.0 3.4 3 0 0 3 3 3 3 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_N PF13249.6 RKO87524.1 - 0.011 14.8 0.0 0.16 11.1 0.0 1.7 1 1 1 2 2 2 0 Squalene-hopene cyclase N-terminal domain tRNA_lig_CPD PF08302.11 RKO87525.1 - 0.11 12.0 0.0 0.16 11.4 0.0 1.1 1 0 0 1 1 1 0 Fungal tRNA ligase phosphodiesterase domain Pkinase PF00069.25 RKO87529.1 - 3.5e-07 29.9 0.0 6.3e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Choline_kinase PF01633.20 RKO87529.1 - 0.09 12.4 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase Trp_oprn_chp PF09534.10 RKO87531.1 - 8.5 6.1 10.1 15 5.3 10.1 1.6 1 1 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) XPG_N PF00752.17 RKO87533.1 - 0.0025 18.3 0.0 0.009 16.5 0.0 2.0 1 1 0 1 1 1 1 XPG N-terminal domain Lactamase_B_6 PF16661.5 RKO87534.1 - 9.5e-26 90.4 0.0 2e-25 89.4 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Beta-Casp PF10996.8 RKO87534.1 - 4.9e-24 84.7 0.0 9.4e-24 83.8 0.0 1.5 1 0 0 1 1 1 1 Beta-Casp domain RMMBL PF07521.12 RKO87534.1 - 8.2e-19 67.3 0.0 1.5e-18 66.5 0.0 1.4 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 RKO87534.1 - 1.1e-12 48.4 0.0 1.1e-09 38.6 0.0 2.3 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 RKO87534.1 - 2e-09 37.3 1.1 1.6e-08 34.3 0.1 2.1 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 RKO87534.1 - 8.9e-05 22.4 0.0 0.00063 19.7 0.0 2.4 2 1 0 2 2 2 1 Beta-lactamase superfamily domain Beta_lactamase3 PF17030.5 RKO87534.1 - 0.0082 15.4 0.0 0.027 13.7 0.0 1.9 1 1 0 1 1 1 1 Putative beta-lactamase-like family EF-hand_1 PF00036.32 RKO87535.1 - 1.3e-15 55.6 3.7 7.4e-07 28.3 0.2 3.3 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 RKO87535.1 - 2e-14 52.2 3.6 3.2e-06 26.6 0.5 3.3 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 RKO87535.1 - 3.1e-09 35.9 5.0 2.6e-05 23.5 0.1 3.2 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 RKO87535.1 - 4.2e-09 36.7 4.6 7.7e-05 23.1 0.4 2.3 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 RKO87535.1 - 3.1e-07 30.1 5.1 0.00033 20.4 0.4 2.7 1 1 1 2 2 2 2 EF-hand domain pair Caleosin PF05042.13 RKO87535.1 - 0.049 13.6 0.8 1 9.3 0.0 2.3 2 1 1 3 3 3 0 Caleosin related protein SPARC_Ca_bdg PF10591.9 RKO87535.1 - 0.055 13.8 0.1 1.8 8.9 0.0 2.2 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region F-box-like PF12937.7 RKO87538.1 - 0.0045 16.8 0.1 0.01 15.7 0.1 1.7 1 0 0 1 1 1 1 F-box-like DUF1180 PF06679.12 RKO87538.1 - 0.14 12.6 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Helicase_PWI PF18149.1 RKO87541.1 - 1.3e-07 31.8 0.0 1e-06 28.9 0.0 2.0 1 1 0 1 1 1 1 N-terminal helicase PWI domain HTH_psq PF05225.16 RKO87542.1 - 0.14 11.9 0.0 0.3 10.8 0.0 1.5 1 0 0 1 1 1 0 helix-turn-helix, Psq domain F-box-like PF12937.7 RKO87543.1 - 0.00015 21.6 1.1 0.00045 20.0 1.1 1.9 1 1 0 1 1 1 1 F-box-like Lactamase_B_2 PF12706.7 RKO87544.1 - 1.5e-40 138.9 0.0 2.2e-40 138.4 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 RKO87544.1 - 5.3e-12 45.9 0.0 6.3e-12 45.7 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 RKO87544.1 - 0.0021 18.1 0.9 0.0066 16.5 0.1 2.3 2 2 0 2 2 2 1 Metallo-beta-lactamase superfamily FANCAA PF15146.6 RKO87547.1 - 0.13 11.4 0.0 0.3 10.1 0.0 1.6 1 1 0 1 1 1 0 Fanconi anemia-associated dCache_1 PF02743.18 RKO87548.1 - 0.017 14.9 5.8 0.048 13.4 5.8 1.7 1 1 0 1 1 1 0 Cache domain Type2_restr_D3 PF16902.5 RKO87548.1 - 0.16 11.9 0.2 0.49 10.4 0.2 1.8 1 0 0 1 1 1 0 Type-2 restriction enzyme D3 domain DUF948 PF06103.11 RKO87548.1 - 4 7.8 12.1 0.082 13.2 3.2 2.6 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) ADH_zinc_N PF00107.26 RKO87549.1 - 5.7e-27 94.3 0.3 8e-27 93.8 0.3 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 RKO87549.1 - 1.7e-12 48.5 0.0 2.9e-12 47.8 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ACP_syn_III_C PF08541.10 RKO87549.1 - 0.0023 18.1 0.4 0.0064 16.6 0.1 1.9 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ADH_N PF08240.12 RKO87549.1 - 0.003 17.4 0.2 0.16 11.9 0.0 3.1 3 1 0 3 3 3 1 Alcohol dehydrogenase GroES-like domain AlaDh_PNT_C PF01262.21 RKO87549.1 - 0.19 11.0 2.0 0.3 10.3 2.0 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Kelch_6 PF13964.6 RKO87550.1 - 1.5e-08 34.6 10.8 0.57 10.6 0.0 5.8 5 0 0 5 5 5 4 Kelch motif DUF1668 PF07893.13 RKO87550.1 - 0.00012 21.5 1.8 0.00026 20.5 1.8 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1668) SH3_1 PF00018.28 RKO87550.1 - 0.002 17.7 0.0 0.0032 17.0 0.0 1.4 1 0 0 1 1 1 1 SH3 domain Kelch_1 PF01344.25 RKO87550.1 - 0.0024 17.4 5.0 3.9 7.1 0.0 4.7 5 0 0 5 5 5 2 Kelch motif Kelch_5 PF13854.6 RKO87550.1 - 0.0091 16.0 0.0 0.12 12.3 0.0 2.8 2 0 0 2 2 2 1 Kelch motif Kelch_4 PF13418.6 RKO87550.1 - 0.042 13.9 9.4 8.8 6.4 0.1 5.5 5 0 0 5 5 5 0 Galactose oxidase, central domain Kelch_3 PF13415.6 RKO87550.1 - 0.13 12.5 10.5 10 6.5 0.2 4.8 3 1 1 4 4 4 0 Galactose oxidase, central domain Asp PF00026.23 RKO87552.1 - 0.00022 20.8 0.1 0.00036 20.0 0.1 1.3 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TFIID-18kDa PF02269.16 RKO87553.1 - 1.1e-15 57.3 0.0 1.3e-15 57.2 0.0 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 18kD subunit CUE PF02845.16 RKO87554.1 - 2.6e-06 27.0 0.2 5.4e-06 26.0 0.2 1.6 1 0 0 1 1 1 1 CUE domain Casc1_N PF15927.5 RKO87557.1 - 6.5e-33 114.1 14.8 6.5e-33 114.1 14.8 2.5 1 1 1 2 2 2 1 Cancer susceptibility candidate 1 N-terminus Fzo_mitofusin PF04799.13 RKO87557.1 - 0.013 15.0 7.4 0.032 13.8 7.4 1.5 1 0 0 1 1 1 0 fzo-like conserved region NCBP3 PF10309.9 RKO87558.1 - 4.5e-05 23.2 0.1 7.6e-05 22.5 0.1 1.3 1 0 0 1 1 1 1 Nuclear cap-binding protein subunit 3 RNA_bind PF08675.11 RKO87558.1 - 0.00083 19.3 0.0 0.0014 18.6 0.0 1.3 1 0 0 1 1 1 1 RNA binding domain DUF3384 PF11864.8 RKO87559.1 - 0.05 12.5 0.1 0.052 12.5 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3384) JmjC PF02373.22 RKO87560.1 - 2.4e-17 63.4 0.1 3.5e-17 62.9 0.1 1.3 1 0 0 1 1 1 1 JmjC domain, hydroxylase GPI PF06560.11 RKO87560.1 - 0.0055 16.0 0.3 0.11 11.8 0.1 2.4 3 0 0 3 3 3 1 Glucose-6-phosphate isomerase (GPI) NAD_binding_6 PF08030.12 RKO87562.1 - 9e-31 107.1 0.0 1.5e-30 106.4 0.0 1.3 1 0 0 1 1 1 1 Ferric reductase NAD binding domain FAD_binding_8 PF08022.12 RKO87562.1 - 5.1e-23 81.2 0.0 1.3e-22 79.9 0.0 1.7 1 0 0 1 1 1 1 FAD-binding domain Ferric_reduct PF01794.19 RKO87562.1 - 3.4e-18 66.0 15.7 3.5e-18 65.9 10.6 2.3 1 1 1 2 2 2 1 Ferric reductase like transmembrane component FAD_binding_6 PF00970.24 RKO87562.1 - 9.7e-05 22.7 0.0 0.00021 21.6 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Calreticulin PF00262.18 RKO87563.1 - 2.7e-76 256.8 12.3 2.2e-59 201.2 4.3 2.2 1 1 1 2 2 2 2 Calreticulin family PrmA PF06325.13 RKO87564.1 - 4.7e-06 26.2 0.1 6.5e-06 25.8 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 RKO87564.1 - 0.00033 21.3 0.0 0.00053 20.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 RKO87564.1 - 0.00038 20.3 0.0 0.00082 19.2 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 RKO87564.1 - 0.0038 16.8 0.0 0.0054 16.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Cons_hypoth95 PF03602.15 RKO87564.1 - 0.0063 16.2 0.0 0.0091 15.6 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 FtsJ PF01728.19 RKO87564.1 - 0.038 14.1 0.1 0.071 13.2 0.1 1.5 1 1 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_11 PF08241.12 RKO87564.1 - 0.047 14.3 0.0 0.086 13.5 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain DREV PF05219.12 RKO87564.1 - 0.069 12.2 0.0 0.11 11.6 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase CMAS PF02353.20 RKO87564.1 - 0.081 12.2 0.0 0.1 11.9 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_9 PF08003.11 RKO87564.1 - 0.11 11.3 0.0 0.19 10.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Methyltransf_32 PF13679.6 RKO87564.1 - 0.12 12.3 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain MutS_V PF00488.21 RKO87566.1 - 1.7e-63 214.1 0.0 1.9e-63 213.9 0.0 1.0 1 0 0 1 1 1 1 MutS domain V Cullin PF00888.22 RKO87567.1 - 2.9e-16 59.3 0.0 4.1e-16 58.7 0.0 1.1 1 0 0 1 1 1 1 Cullin family Whirly PF08536.11 RKO87567.1 - 0.0026 17.6 0.0 0.0047 16.7 0.0 1.4 1 0 0 1 1 1 1 Whirly transcription factor MarR_2 PF12802.7 RKO87567.1 - 0.03 14.2 0.0 0.085 12.8 0.0 1.8 1 0 0 1 1 1 0 MarR family TFIIA PF03153.13 RKO87568.1 - 1.2 9.0 20.7 1.7 8.6 20.7 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit PAT1 PF09770.9 RKO87568.1 - 2.3 6.4 19.4 2.9 6.0 19.4 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 Suf PF05843.14 RKO87568.1 - 9 6.2 11.8 12 5.8 11.8 1.2 1 0 0 1 1 1 0 Suppressor of forked protein (Suf) G-patch PF01585.23 RKO87569.1 - 1.9e-07 30.9 0.6 6.3e-07 29.2 0.3 2.1 2 0 0 2 2 2 1 G-patch domain SR-25 PF10500.9 RKO87569.1 - 0.0005 19.8 17.4 0.0012 18.6 17.4 1.5 1 0 0 1 1 1 1 Nuclear RNA-splicing-associated protein G-patch_2 PF12656.7 RKO87569.1 - 0.0028 17.7 0.0 0.0028 17.7 0.0 2.7 2 0 0 2 2 2 1 G-patch domain SRP-alpha_N PF04086.13 RKO87569.1 - 0.11 12.4 10.8 0.29 11.0 10.8 1.7 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal IMUP PF15761.5 RKO87569.1 - 4.5 8.0 18.1 0.38 11.5 12.3 2.3 2 0 0 2 2 2 0 Immortalisation up-regulated protein YL1 PF05764.13 RKO87569.1 - 5.3 7.1 23.9 0.0089 16.2 11.8 2.4 2 1 1 3 3 3 0 YL1 nuclear protein Aldedh PF00171.22 RKO87570.1 - 6.6e-07 28.2 0.1 4.1e-05 22.3 0.2 2.0 2 0 0 2 2 2 2 Aldehyde dehydrogenase family RNA_pol_Rpc4 PF05132.14 RKO87571.1 - 2.1e-17 63.9 0.1 3.3e-16 60.0 0.1 2.6 1 1 0 1 1 1 1 RNA polymerase III RPC4 Serglycin PF04360.12 RKO87571.1 - 0.019 14.9 4.0 9.2 6.2 3.7 2.8 2 0 0 2 2 2 0 Serglycin RNase_PH PF01138.21 RKO87572.1 - 1e-25 90.7 1.6 5.1e-22 78.8 0.0 2.2 1 1 1 2 2 2 2 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 RKO87572.1 - 2.2e-10 40.4 0.0 4.2e-10 39.5 0.0 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 ATG16 PF08614.11 RKO87574.1 - 0.0026 18.0 11.5 0.0026 18.0 11.5 5.2 1 1 4 5 5 5 3 Autophagy protein 16 (ATG16) CENP-F_leu_zip PF10473.9 RKO87574.1 - 0.0066 16.5 14.0 0.0066 16.5 14.0 4.9 1 1 2 4 4 4 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GAS PF13851.6 RKO87574.1 - 0.0085 15.5 7.8 0.0085 15.5 7.8 4.7 1 1 3 5 5 5 2 Growth-arrest specific micro-tubule binding XkdW PF09636.10 RKO87574.1 - 8.7 6.5 9.0 0.27 11.4 0.3 3.0 3 1 0 3 3 3 0 XkdW protein 4HBT_3 PF13622.6 RKO87575.1 - 7.5e-26 91.9 0.1 8.8e-26 91.7 0.1 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily APH_6_hur PF04655.14 RKO87577.1 - 0.11 11.8 0.1 0.25 10.7 0.1 1.5 1 0 0 1 1 1 0 Aminoglycoside/hydroxyurea antibiotic resistance kinase Ribosomal_L30 PF00327.20 RKO87578.1 - 2.6e-09 36.8 0.1 2.9e-09 36.7 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e SH3_9 PF14604.6 RKO87579.1 - 2e-06 27.5 0.0 2.9e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO87579.1 - 2.4e-05 23.9 0.0 3.5e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 RKO87579.1 - 0.00068 19.3 0.0 0.0015 18.1 0.0 1.6 2 0 0 2 2 2 1 Variant SH3 domain SH3_1 PF00018.28 RKO87580.1 - 6.1e-12 45.0 0.0 1e-11 44.2 0.0 1.4 1 0 0 1 1 1 1 SH3 domain SH3_9 PF14604.6 RKO87580.1 - 1.1e-09 38.0 0.1 1.7e-09 37.4 0.1 1.3 1 0 0 1 1 1 1 Variant SH3 domain SH3_2 PF07653.17 RKO87580.1 - 1.1e-08 34.6 0.1 2e-08 33.8 0.1 1.3 1 0 0 1 1 1 1 Variant SH3 domain Snf7 PF03357.21 RKO87581.1 - 2e-07 30.8 17.0 2e-07 30.8 17.0 1.9 1 1 0 1 1 1 1 Snf7 T2SSM PF04612.12 RKO87581.1 - 0.32 11.0 3.0 0.26 11.3 1.4 1.8 2 1 0 2 2 2 0 Type II secretion system (T2SS), protein M Nab1 PF04902.12 RKO87582.1 - 9.5 6.6 7.9 20 5.6 0.1 3.7 3 1 1 4 4 4 0 Conserved region in Nab1 Dehydrin PF00257.19 RKO87584.1 - 0.16 12.5 5.4 0.35 11.4 5.4 1.5 1 0 0 1 1 1 0 Dehydrin Retrotran_gag_2 PF14223.6 RKO87585.1 - 0.0017 18.0 0.0 0.0023 17.6 0.0 1.1 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type FhuF PF06276.12 RKO87585.1 - 0.068 13.6 0.0 0.099 13.1 0.0 1.2 1 0 0 1 1 1 0 Ferric iron reductase FhuF-like transporter Ribosomal_L24e PF01246.20 RKO87586.1 - 1.3e-32 111.8 8.5 2.4e-32 110.9 8.5 1.4 1 0 0 1 1 1 1 Ribosomal protein L24e HAGH_C PF16123.5 RKO87586.1 - 0.3 11.6 5.1 0.22 12.1 1.4 2.1 2 0 0 2 2 2 0 Hydroxyacylglutathione hydrolase C-terminus SAD_SRA PF02182.17 RKO87587.1 - 4.3e-05 23.3 0.0 5.8e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 SAD/SRA domain EF-hand_1 PF00036.32 RKO87588.1 - 3.2e-22 76.3 11.4 5.1e-08 31.9 0.8 4.7 5 0 0 5 5 5 3 EF hand EF-hand_7 PF13499.6 RKO87588.1 - 3.4e-22 78.7 4.8 6.7e-15 55.3 0.5 3.1 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 RKO87588.1 - 1.2e-21 74.7 7.1 3.8e-06 26.4 0.1 5.2 4 1 1 5 5 5 3 EF-hand domain EF-hand_5 PF13202.6 RKO87588.1 - 1.9e-17 61.9 10.8 7.3e-07 28.4 0.4 4.6 5 0 0 5 5 5 3 EF hand EF-hand_8 PF13833.6 RKO87588.1 - 1.9e-13 50.0 7.7 2.6e-07 30.4 1.3 3.3 2 2 1 3 3 3 3 EF-hand domain pair EF-hand_4 PF12763.7 RKO87588.1 - 7e-07 29.1 6.7 0.0039 17.1 0.1 3.5 2 1 2 4 4 4 3 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 RKO87588.1 - 0.0001 22.6 1.8 0.12 12.7 0.4 3.3 2 2 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 RKO87588.1 - 0.021 15.1 1.2 1.3 9.4 0.1 2.9 2 1 1 3 3 3 0 EF-hand domain S10_plectin PF03501.15 RKO87588.1 - 0.18 11.9 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 Plectin/S10 domain Glyco_hydro_43 PF04616.14 RKO87589.1 - 7.1e-37 127.3 0.2 3.1e-36 125.2 0.2 1.8 1 1 0 1 1 1 1 Glycosyl hydrolases family 43 MCR_alpha PF02249.17 RKO87590.1 - 0.14 12.7 0.0 0.14 12.6 0.0 1.1 1 0 0 1 1 1 0 Methyl-coenzyme M reductase alpha subunit, C-terminal domain HEAT PF02985.22 RKO87591.1 - 3.7e-11 42.3 3.3 0.26 11.6 0.1 7.6 7 0 0 7 7 7 2 HEAT repeat Cnd1 PF12717.7 RKO87591.1 - 1.3e-09 38.3 0.5 0.0021 18.1 0.1 3.2 4 0 0 4 4 4 2 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 RKO87591.1 - 2.2e-08 34.4 3.4 0.0053 17.1 0.5 4.4 4 2 1 5 5 5 2 HEAT repeats UPF0697 PF15117.6 RKO87591.1 - 0.13 12.3 0.9 0.41 10.7 0.4 2.0 2 0 0 2 2 2 0 Uncharacterised protein family UPF0697 HEAT_EZ PF13513.6 RKO87591.1 - 0.27 11.8 7.7 1.1e+02 3.4 0.0 6.2 7 0 0 7 7 7 0 HEAT-like repeat DUF1843 PF08898.10 RKO87592.1 - 0.094 13.2 0.2 3 8.4 0.0 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF1843) RRM_1 PF00076.22 RKO87593.1 - 0.00021 21.0 0.0 0.019 14.7 0.0 2.5 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Pre-PUA PF17832.1 RKO87594.1 - 4.6e-21 75.3 0.0 1.2e-20 73.9 0.0 1.7 2 0 0 2 2 2 1 Pre-PUA-like domain PUA PF01472.20 RKO87594.1 - 0.00018 21.4 0.1 0.00048 20.0 0.1 1.6 1 0 0 1 1 1 1 PUA domain Peptidase_M28 PF04389.17 RKO87596.1 - 9.8e-10 38.4 0.0 1e-09 38.4 0.0 1.0 1 0 0 1 1 1 1 Peptidase family M28 SAD_SRA PF02182.17 RKO87597.1 - 3.4e-39 134.1 0.0 4e-39 133.8 0.0 1.1 1 0 0 1 1 1 1 SAD/SRA domain PE_PPE_C PF12484.8 RKO87598.1 - 0.16 12.9 8.8 0.45 11.5 8.8 1.8 1 0 0 1 1 1 0 Polymorphic PE/PPE proteins C terminal Hamartin PF04388.12 RKO87598.1 - 2 7.0 4.0 2.2 6.8 4.0 1.0 1 0 0 1 1 1 0 Hamartin protein 7TMR-DISM_7TM PF07695.11 RKO87599.1 - 0.024 14.5 6.3 0.033 14.1 6.3 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling DUF4201 PF13870.6 RKO87600.1 - 0.0017 18.1 0.8 0.0032 17.2 0.8 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) KIAA1430 PF13879.6 RKO87600.1 - 0.07 13.9 0.1 0.15 12.9 0.1 1.6 1 0 0 1 1 1 0 KIAA1430 homologue ATG16 PF08614.11 RKO87600.1 - 0.09 13.0 12.5 0.24 11.6 12.5 1.7 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) Fez1 PF06818.15 RKO87600.1 - 0.098 13.1 6.7 0.17 12.3 6.7 1.3 1 0 0 1 1 1 0 Fez1 Spc7 PF08317.11 RKO87600.1 - 0.15 10.9 4.2 0.24 10.2 4.2 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein Phage_GP20 PF06810.11 RKO87600.1 - 0.22 11.3 2.2 0.38 10.5 2.2 1.3 1 0 0 1 1 1 0 Phage minor structural protein GP20 DUF4407 PF14362.6 RKO87600.1 - 0.38 10.1 4.9 0.71 9.2 4.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) APG6_N PF17675.1 RKO87600.1 - 0.73 10.4 18.4 1.7 9.2 15.5 2.6 2 1 1 3 3 3 0 Apg6 coiled-coil region Atg14 PF10186.9 RKO87600.1 - 1.5 7.8 4.1 2.4 7.2 4.1 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TMCO5 PF14992.6 RKO87600.1 - 1.9 8.0 4.5 3 7.3 4.5 1.2 1 0 0 1 1 1 0 TMCO5 family FmiP_Thoc5 PF09766.9 RKO87600.1 - 3.3 6.9 6.4 4.9 6.3 6.4 1.1 1 0 0 1 1 1 0 Fms-interacting protein/Thoc5 Mod_r PF07200.13 RKO87600.1 - 4.2 7.5 7.3 0.37 10.9 2.7 1.6 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein DDHD PF02862.17 RKO87601.1 - 0.18 12.0 3.9 0.2 11.8 3.9 1.1 1 0 0 1 1 1 0 DDHD domain DUF4407 PF14362.6 RKO87601.1 - 0.23 10.7 13.9 0.29 10.5 13.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Spt20 PF12090.8 RKO87601.1 - 0.25 10.9 14.8 0.26 10.9 14.8 1.2 1 0 0 1 1 1 0 Spt20 family DUF724 PF05266.14 RKO87601.1 - 0.3 10.9 11.0 0.38 10.5 11.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF2229 PF09989.9 RKO87601.1 - 0.4 10.3 4.3 0.46 10.1 4.3 1.3 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) Seryl_tRNA_N PF02403.22 RKO87601.1 - 0.42 10.9 14.8 0.59 10.4 14.8 1.1 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF4763 PF15960.5 RKO87601.1 - 0.46 9.7 17.9 0.57 9.5 17.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4763) APG6_N PF17675.1 RKO87601.1 - 0.58 10.7 21.5 0.82 10.2 21.5 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region TFIIA PF03153.13 RKO87601.1 - 0.6 10.0 20.5 0.66 9.9 20.5 1.0 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF702 PF05142.12 RKO87601.1 - 0.69 10.4 6.4 0.88 10.0 6.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF702) DUF1501 PF07394.12 RKO87601.1 - 0.73 8.8 9.9 0.77 8.8 9.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1501) MRP-S26 PF14943.6 RKO87601.1 - 0.73 9.7 13.0 0.83 9.5 13.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S26 Atg14 PF10186.9 RKO87601.1 - 1.5 7.9 13.2 1.8 7.6 13.2 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Exonuc_VII_L PF02601.15 RKO87601.1 - 1.6 8.2 13.8 1.8 8.1 13.8 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit Gti1_Pac2 PF09729.9 RKO87601.1 - 1.7 8.7 6.5 2.1 8.4 6.5 1.1 1 0 0 1 1 1 0 Gti1/Pac2 family OmpH PF03938.14 RKO87601.1 - 1.8 8.9 28.1 2.3 8.6 28.1 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Presenilin PF01080.17 RKO87601.1 - 2 7.1 9.4 2.3 6.9 9.4 1.0 1 0 0 1 1 1 0 Presenilin FapA PF03961.13 RKO87601.1 - 2.6 6.5 8.3 3 6.4 8.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A UPF0242 PF06785.11 RKO87601.1 - 2.8 8.0 17.6 3.5 7.7 17.6 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus LMBR1 PF04791.16 RKO87601.1 - 3 6.7 5.4 3.1 6.6 5.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Neur_chan_memb PF02932.16 RKO87601.1 - 3.2 7.8 4.5 3.4 7.7 4.5 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region HisKA PF00512.25 RKO87602.1 - 2.9e-08 33.6 0.1 6.2e-08 32.6 0.1 1.6 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain SMN PF06003.12 RKO87603.1 - 0.0025 17.1 11.6 0.02 14.1 0.2 2.9 2 1 1 3 3 3 2 Survival motor neuron protein (SMN) MNSV_P7B PF06692.11 RKO87604.1 - 0.16 12.0 0.0 0.4 10.7 0.0 1.6 1 0 0 1 1 1 0 Melon necrotic spot virus P7B protein GN3L_Grn1 PF08701.11 RKO87605.1 - 0.081 13.0 0.3 0.15 12.2 0.3 1.3 1 0 0 1 1 1 0 GNL3L/Grn1 putative GTPase CBF_beta PF02312.17 RKO87605.1 - 0.13 11.9 0.0 0.23 11.1 0.0 1.3 1 0 0 1 1 1 0 Core binding factor beta subunit HEAT PF02985.22 RKO87606.1 - 0.00036 20.5 7.6 0.12 12.7 0.2 4.5 4 0 0 4 4 4 2 HEAT repeat Cnd1 PF12717.7 RKO87606.1 - 0.0022 18.1 0.1 1.1 9.3 0.0 3.1 3 1 0 3 3 3 2 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 RKO87606.1 - 0.0038 17.6 15.0 0.25 11.7 1.8 4.8 6 0 0 6 6 6 2 HEAT repeats HEAT_EZ PF13513.6 RKO87606.1 - 0.22 12.1 11.4 0.36 11.4 0.1 5.0 5 0 0 5 5 5 0 HEAT-like repeat Arm PF00514.23 RKO87606.1 - 0.27 11.3 4.6 0.79 9.9 0.1 3.8 4 0 0 4 4 4 0 Armadillo/beta-catenin-like repeat Hexapep PF00132.24 RKO87608.1 - 0.12 12.1 2.4 0.38 10.6 2.4 1.8 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) RWD PF05773.22 RKO87609.1 - 6.8e-14 52.2 0.0 1.3e-13 51.2 0.0 1.4 1 1 0 1 1 1 1 RWD domain RRM_1 PF00076.22 RKO87611.1 - 1.2e-12 47.4 0.0 1.7e-12 46.9 0.0 1.3 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 RKO87611.1 - 0.015 15.3 0.0 0.02 14.9 0.0 1.2 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif RRM_occluded PF16842.5 RKO87611.1 - 0.024 14.5 0.0 0.18 11.7 0.0 1.9 1 1 0 1 1 1 0 Occluded RNA-recognition motif RRM_8 PF11835.8 RKO87611.1 - 0.027 14.7 0.1 0.092 13.0 0.1 1.7 1 1 0 1 1 1 0 RRM-like domain IPPT PF01715.17 RKO87612.1 - 3.4e-56 190.6 0.0 4.8e-56 190.1 0.0 1.1 1 0 0 1 1 1 1 IPP transferase IPT PF01745.16 RKO87612.1 - 0.00024 20.6 0.0 0.00052 19.5 0.0 1.5 1 0 0 1 1 1 1 Isopentenyl transferase AAA_33 PF13671.6 RKO87612.1 - 0.0086 16.2 0.1 0.061 13.5 0.1 2.4 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 RKO87612.1 - 0.011 16.2 0.1 0.36 11.4 0.0 2.8 2 1 1 3 3 3 0 AAA domain RNA_helicase PF00910.22 RKO87612.1 - 0.05 14.0 0.0 0.19 12.1 0.0 1.9 2 0 0 2 2 2 0 RNA helicase AAA_16 PF13191.6 RKO87612.1 - 0.053 13.9 0.2 0.68 10.3 0.1 2.5 1 1 0 2 2 2 0 AAA ATPase domain DUF87 PF01935.17 RKO87612.1 - 0.21 11.6 0.1 0.44 10.6 0.1 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain Peripla_BP_4 PF13407.6 RKO87614.1 - 1.4e-06 28.0 0.7 0.00041 20.0 0.1 2.4 2 1 0 2 2 2 2 Periplasmic binding protein domain Ephrin_rec_like PF07699.13 RKO87614.1 - 8.7e-06 25.4 4.1 1.1e-05 25.1 1.9 2.2 2 0 0 2 2 2 1 Putative ephrin-receptor like TNFR_c6 PF00020.18 RKO87614.1 - 0.011 16.1 3.8 0.066 13.6 0.1 3.1 1 1 2 3 3 3 0 TNFR/NGFR cysteine-rich region NCD3G PF07562.14 RKO87614.1 - 0.32 11.0 5.4 0.28 11.2 3.4 2.0 2 0 0 2 2 2 0 Nine Cysteines Domain of family 3 GPCR Rad17 PF03215.15 RKO87620.1 - 8.1e-09 35.7 0.1 1.2e-08 35.1 0.1 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain ADH_zinc_N PF00107.26 RKO87621.1 - 0.00012 22.1 0.7 0.00028 20.9 0.7 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase WD40 PF00400.32 RKO87625.1 - 5.7e-45 150.4 17.8 4.5e-06 27.3 0.5 7.5 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO87625.1 - 4.2e-08 33.4 0.1 0.034 14.4 0.0 4.6 4 1 1 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO87625.1 - 1.2e-07 30.8 0.4 0.13 10.9 0.0 4.0 4 0 0 4 4 4 3 Nucleoporin Nup120/160 PQQ PF01011.21 RKO87625.1 - 0.17 11.9 0.2 21 5.3 0.0 3.5 4 0 0 4 4 4 0 PQQ enzyme repeat ADP_ribosyl_GH PF03747.14 RKO87627.1 - 7e-22 78.5 1.7 8.2e-22 78.3 1.7 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Metal_resist PF13801.6 RKO87627.1 - 0.046 13.9 0.4 2 8.6 0.2 2.2 2 0 0 2 2 2 0 Heavy-metal resistance CRCB PF02537.15 RKO87627.1 - 0.1 12.9 0.0 15 6.0 0.0 2.2 2 0 0 2 2 2 0 CrcB-like protein, Camphor Resistance (CrcB) ADP_ribosyl_GH PF03747.14 RKO87628.1 - 0.00035 20.4 0.0 0.00076 19.3 0.0 1.5 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Zn_clus PF00172.18 RKO87628.1 - 0.0012 18.9 9.2 0.0019 18.3 9.2 1.3 1 0 0 1 1 1 1 Fungal Zn(2)-Cys(6) binuclear cluster domain Fungal_trans PF04082.18 RKO87628.1 - 0.085 11.9 2.4 1.3 8.0 0.0 2.4 1 1 1 2 2 2 0 Fungal specific transcription factor domain EF-hand_1 PF00036.32 RKO87629.1 - 0.0031 17.0 0.1 0.0069 15.9 0.1 1.6 1 0 0 1 1 1 1 EF hand EF-hand_6 PF13405.6 RKO87629.1 - 0.0063 16.4 0.0 0.015 15.2 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 RKO87629.1 - 0.017 15.6 0.0 0.028 14.8 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_5 PF13202.6 RKO87629.1 - 0.035 13.6 0.1 0.066 12.7 0.1 1.4 1 0 0 1 1 1 0 EF hand EF-hand_13 PF17958.1 RKO87629.1 - 0.05 13.4 0.0 0.087 12.6 0.0 1.4 1 0 0 1 1 1 0 EF-hand domain Pyr_redox_2 PF07992.14 RKO87630.1 - 1.7e-41 142.4 0.0 2e-41 142.2 0.0 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase AIF_C PF14721.6 RKO87630.1 - 1.7e-21 77.0 0.0 2.7e-21 76.3 0.0 1.4 1 0 0 1 1 1 1 Apoptosis-inducing factor, mitochondrion-associated, C-term Pyr_redox PF00070.27 RKO87630.1 - 7.6e-13 48.8 0.0 3.7e-12 46.6 0.0 2.1 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 RKO87630.1 - 5.7e-06 26.4 0.9 0.07 13.1 0.0 3.9 4 0 0 4 4 4 2 FAD-NAD(P)-binding HI0933_like PF03486.14 RKO87630.1 - 8.9e-05 21.4 0.2 0.014 14.2 0.0 2.5 3 1 0 3 3 3 2 HI0933-like protein K_oxygenase PF13434.6 RKO87630.1 - 0.0003 20.1 0.0 0.031 13.4 0.0 2.2 2 0 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) Amino_oxidase PF01593.24 RKO87630.1 - 0.0017 17.7 0.0 0.0061 15.9 0.0 1.7 1 1 0 2 2 2 1 Flavin containing amine oxidoreductase DAO PF01266.24 RKO87630.1 - 0.018 14.6 6.4 0.16 11.5 0.0 3.1 2 1 1 3 3 3 0 FAD dependent oxidoreductase ATP-grasp_6 PF18419.1 RKO87630.1 - 0.028 14.1 0.0 0.069 12.8 0.0 1.6 1 0 0 1 1 1 0 ATP-grasp-like domain GIDA PF01134.22 RKO87630.1 - 1 8.4 2.3 57 2.6 0.1 2.9 2 1 1 3 3 3 0 Glucose inhibited division protein A E1-E2_ATPase PF00122.20 RKO87631.1 - 7.1e-16 58.3 0.0 1.7e-15 57.0 0.0 1.6 1 0 0 1 1 1 1 E1-E2 ATPase PhoLip_ATPase_N PF16209.5 RKO87631.1 - 8.9e-16 57.3 8.9 1.9e-15 56.3 8.9 1.6 1 0 0 1 1 1 1 Phospholipid-translocating ATPase N-terminal Hydrolase PF00702.26 RKO87631.1 - 8e-09 36.1 0.2 5.2e-08 33.4 0.2 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 RKO87631.1 - 2.1e-08 34.1 0.0 4.7e-07 29.8 0.0 2.3 2 0 0 2 2 2 1 Cation transport ATPase (P-type) Med14 PF08638.11 RKO87632.1 - 3.9e-66 222.1 0.0 4.4e-66 222.0 0.0 1.0 1 0 0 1 1 1 1 Mediator complex subunit MED14 ADH_zinc_N_2 PF13602.6 RKO87633.1 - 5.1e-12 47.0 0.0 1e-11 46.0 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 RKO87633.1 - 5.2e-09 36.0 0.0 1.1e-08 35.0 0.0 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 RKO87633.1 - 1.9e-08 34.3 0.0 6.7e-08 32.6 0.0 1.9 2 0 0 2 2 2 1 Zinc-binding dehydrogenase TrkA_N PF02254.18 RKO87633.1 - 0.062 13.6 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain Avl9 PF09794.9 RKO87634.1 - 2.6e-05 23.1 0.0 3.5e-05 22.7 0.0 1.1 1 0 0 1 1 1 1 Transport protein Avl9 NR_Repeat PF14046.6 RKO87634.1 - 0.18 11.9 1.9 0.53 10.5 0.1 2.5 2 0 0 2 2 2 0 Nuclear receptor repeat Myosin_tail_1 PF01576.19 RKO87635.1 - 0.00089 17.2 6.1 0.001 17.0 6.1 1.0 1 0 0 1 1 1 1 Myosin tail ADIP PF11559.8 RKO87635.1 - 0.0033 17.5 9.3 0.004 17.3 9.3 1.1 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding CENP-H PF05837.12 RKO87635.1 - 0.021 15.2 8.3 0.026 14.9 8.3 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) TetR_C_12 PF16914.5 RKO87635.1 - 0.031 14.4 0.4 0.036 14.2 0.4 1.2 1 0 0 1 1 1 0 Bacterial transcriptional repressor C-terminal Ribosomal_L37 PF08561.10 RKO87635.1 - 0.081 13.5 4.4 0.098 13.2 4.4 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L37 Helo_like_N PF17111.5 RKO87635.1 - 0.13 11.6 5.1 0.15 11.4 5.1 1.0 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins DUF982 PF06169.12 RKO87635.1 - 0.13 12.3 1.0 0.51 10.4 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF982) Spc24 PF08286.11 RKO87635.1 - 0.16 12.3 2.5 0.21 11.9 2.5 1.3 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 DUF1664 PF07889.12 RKO87635.1 - 0.19 11.8 5.9 0.3 11.2 5.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 RKO87635.1 - 0.22 12.0 4.0 1.4 9.4 0.6 2.3 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) DivIC PF04977.15 RKO87635.1 - 0.26 11.1 7.0 0.78 9.5 7.0 1.9 1 1 0 1 1 1 0 Septum formation initiator SlyX PF04102.12 RKO87635.1 - 0.69 10.6 4.4 0.63 10.7 2.1 2.1 1 1 2 3 3 3 0 SlyX RNase_PH_C PF03725.15 RKO87636.1 - 0.021 14.9 0.0 0.032 14.3 0.0 1.5 1 1 0 1 1 1 0 3' exoribonuclease family, domain 2 Zn_clus PF00172.18 RKO87638.1 - 2.2e-11 43.7 14.0 2.8e-11 43.3 14.0 1.1 1 0 0 1 1 1 1 Fungal Zn(2)-Cys(6) binuclear cluster domain Rep_fac-A_C PF08646.10 RKO87638.1 - 1 9.1 7.3 1.3 8.7 7.3 1.1 1 0 0 1 1 1 0 Replication factor-A C terminal domain DSBA PF01323.20 RKO87640.1 - 5.2e-51 173.2 0.0 6.2e-28 97.9 0.0 2.7 2 1 0 2 2 2 2 DSBA-like thioredoxin domain Kelch_1 PF01344.25 RKO87641.1 - 9.5e-11 41.1 7.8 0.00022 20.7 0.1 4.4 4 0 0 4 4 4 3 Kelch motif Kelch_5 PF13854.6 RKO87641.1 - 4.2e-09 36.2 0.4 2.9e-06 27.1 0.1 3.7 3 0 0 3 3 3 1 Kelch motif Kelch_4 PF13418.6 RKO87641.1 - 7.6e-08 32.2 2.3 0.00039 20.4 0.1 3.9 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO87641.1 - 4.7e-06 26.7 6.5 0.067 13.5 0.1 4.5 5 0 0 5 5 5 2 Kelch motif Kelch_3 PF13415.6 RKO87641.1 - 6.3e-05 23.2 7.5 0.11 12.8 0.6 4.1 3 0 0 3 3 3 2 Galactose oxidase, central domain SH3_1 PF00018.28 RKO87641.1 - 0.00013 21.5 0.0 0.00024 20.6 0.0 1.5 1 0 0 1 1 1 1 SH3 domain SH3_9 PF14604.6 RKO87641.1 - 0.00015 21.6 0.0 0.0016 18.3 0.0 2.3 2 0 0 2 2 2 1 Variant SH3 domain Kelch_2 PF07646.15 RKO87641.1 - 0.00069 19.5 1.5 0.33 11.0 0.0 4.2 4 1 0 4 4 4 1 Kelch motif PBP_N PF17093.5 RKO87641.1 - 2.7 8.2 10.6 0.63 10.3 6.5 2.0 2 0 0 2 2 2 0 Penicillin-binding protein N-terminus Inhibitor_I78 PF11720.8 RKO87642.1 - 0.2 11.7 0.9 0.72 10.0 0.2 2.2 2 0 0 2 2 2 0 Peptidase inhibitor I78 family FNIP PF05725.12 RKO87643.1 - 0.72 10.1 4.5 0.94 9.7 0.3 3.3 4 1 0 4 4 4 0 FNIP Repeat LRR_4 PF12799.7 RKO87643.1 - 3.3 8.3 5.8 26 5.4 0.0 4.4 6 0 0 6 6 6 0 Leucine Rich repeats (2 copies) Surp PF01805.20 RKO87644.1 - 8.8e-26 89.7 0.3 9.5e-13 47.9 0.0 2.4 2 0 0 2 2 2 2 Surp module DRY_EERY PF09750.9 RKO87644.1 - 3.8e-21 75.8 8.5 1.9e-17 63.8 0.0 2.5 2 0 0 2 2 2 2 Alternative splicing regulator Lysyl_oxidase PF01186.17 RKO87645.1 - 2e-27 96.2 0.3 2.5e-27 95.9 0.3 1.1 1 0 0 1 1 1 1 Lysyl oxidase DUF4787 PF16029.5 RKO87645.1 - 0.1 12.7 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4787) Aldo_ket_red PF00248.21 RKO87646.1 - 6.3e-52 176.6 0.0 8.9e-52 176.1 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family P_C PF06640.11 RKO87646.1 - 0.062 13.4 0.1 0.1 12.7 0.1 1.3 1 0 0 1 1 1 0 P protein C-terminus Ribosomal_L33 PF00471.20 RKO87647.1 - 3.3e-09 37.0 0.0 4.2e-09 36.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L33 MFS_1 PF07690.16 RKO87648.1 - 7.6e-42 143.5 42.4 1.2e-41 142.8 42.4 1.4 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO87648.1 - 3.7e-18 65.6 31.8 3.7e-15 55.7 12.3 2.3 2 0 0 2 2 2 2 Sugar (and other) transporter TRI12 PF06609.13 RKO87648.1 - 2e-14 53.0 11.6 2e-14 53.0 11.6 2.1 1 1 1 2 2 2 1 Fungal trichothecene efflux pump (TRI12) OATP PF03137.20 RKO87648.1 - 0.59 8.4 18.3 0.85 7.8 15.6 2.4 1 1 0 1 1 1 0 Organic Anion Transporter Polypeptide (OATP) family Use1 PF09753.9 RKO87648.1 - 3 7.5 3.2 4.1 7.0 3.2 1.1 1 0 0 1 1 1 0 Membrane fusion protein Use1 MtrF PF09472.10 RKO87648.1 - 3.4 7.1 8.3 3.3 7.2 1.9 3.2 3 0 0 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Pkinase PF00069.25 RKO87650.1 - 1.3e-57 195.2 0.0 1.6e-57 194.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO87650.1 - 6.1e-30 104.4 0.0 7.9e-30 104.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO87650.1 - 2.6e-06 27.0 0.0 3.2e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 RKO87650.1 - 0.00044 20.2 0.0 0.00071 19.6 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family RRM_1 PF00076.22 RKO87651.1 - 4.8e-17 61.5 0.0 9.3e-17 60.6 0.0 1.5 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 RKO87651.1 - 0.0088 15.6 0.0 0.012 15.2 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-H2C2_2 PF13465.6 RKO87652.1 - 4.5e-07 30.0 0.7 4.5e-07 30.0 0.7 2.4 2 1 0 2 2 2 1 Zinc-finger double domain zf-C2H2 PF00096.26 RKO87652.1 - 9.7e-07 28.9 7.7 0.01 16.3 1.8 2.6 2 1 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO87652.1 - 1.1e-06 29.0 7.7 0.00079 20.1 1.8 2.6 2 1 1 3 3 3 2 C2H2-type zinc finger zf-C2H2_6 PF13912.6 RKO87652.1 - 1.9e-05 24.5 1.8 0.019 15.0 0.5 2.7 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 RKO87652.1 - 0.00043 20.5 0.2 0.13 12.6 0.1 2.5 1 1 1 2 2 2 2 Zinc-finger double-stranded RNA-binding Prok-RING_1 PF14446.6 RKO87652.1 - 0.0087 16.0 0.8 1.6 8.7 0.1 2.3 2 1 0 2 2 2 2 Prokaryotic RING finger family 1 TF_Zn_Ribbon PF08271.12 RKO87652.1 - 0.02 14.4 1.1 0.69 9.5 0.0 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 RKO87652.1 - 0.07 13.3 3.6 0.16 12.1 3.6 1.7 1 1 0 1 1 1 0 Zinc ribbon domain DZR PF12773.7 RKO87652.1 - 0.11 12.5 4.8 0.34 11.0 4.8 1.7 1 1 0 1 1 1 0 Double zinc ribbon C5HCH PF17982.1 RKO87652.1 - 0.13 12.4 10.1 0.12 12.6 4.3 2.2 1 1 1 2 2 2 0 NSD Cys-His rich domain FYDLN_acid PF09538.10 RKO87652.1 - 0.44 11.2 1.6 1.2 9.8 1.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (FYDLN_acid) Myb_DNA-binding PF00249.31 RKO87656.1 - 1e-24 86.4 1.3 1.3e-11 44.5 0.0 3.3 3 1 0 3 3 3 3 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO87656.1 - 2.3e-19 69.4 0.1 2.9e-08 33.8 0.0 2.4 2 0 0 2 2 2 2 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 RKO87656.1 - 0.048 13.9 0.0 1.5 9.1 0.0 2.2 2 0 0 2 2 2 0 SANT/Myb-like domain of DAMP1 Rap1_C PF11626.8 RKO87656.1 - 0.059 13.5 0.2 5.1 7.3 0.0 2.3 1 1 1 2 2 2 0 TRF2-interacting telomeric protein/Rap1 - C terminal domain RIO1 PF01163.22 RKO87659.1 - 3.4e-09 36.6 0.0 4.3e-09 36.2 0.0 1.1 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 RKO87659.1 - 2.1e-08 34.4 1.8 4.9e-06 26.6 0.6 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 RKO87659.1 - 2.8e-08 33.4 0.0 4.8e-08 32.6 0.0 1.3 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 RKO87659.1 - 2.2e-07 30.5 0.0 2.4e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO87659.1 - 0.00017 21.0 0.0 0.0002 20.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Cnd2 PF05786.14 RKO87660.1 - 9.7e-158 527.2 0.0 1.9e-157 526.2 0.0 1.4 1 1 0 1 1 1 1 Condensin complex subunit 2 CNDH2_N PF06278.11 RKO87660.1 - 0.00095 19.4 0.0 0.0022 18.2 0.0 1.5 1 0 0 1 1 1 1 Condensin II complex subunit CAP-H2 or CNDH2, N-terminal Rad21_Rec8_N PF04825.13 RKO87660.1 - 0.13 12.4 0.0 0.26 11.5 0.0 1.5 1 0 0 1 1 1 0 N terminus of Rad21 / Rec8 like protein Pkinase PF00069.25 RKO87662.1 - 6.9e-07 28.9 0.0 6.9e-07 28.9 0.0 1.8 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO87662.1 - 8e-05 22.1 0.0 0.00015 21.2 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO87662.1 - 0.049 13.6 0.0 0.098 12.6 0.0 1.5 1 0 0 1 1 1 0 Phosphotransferase enzyme family MC1 PF05854.11 RKO87663.1 - 0.0003 21.0 0.1 0.00048 20.4 0.1 1.3 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 FAD_binding_6 PF00970.24 RKO87663.1 - 0.12 12.8 0.1 4.2 7.8 0.0 2.2 1 1 1 2 2 2 0 Oxidoreductase FAD-binding domain Abhydrolase_1 PF00561.20 RKO87664.1 - 2.8e-16 60.0 0.1 4.8e-16 59.2 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold zf-C2H2 PF00096.26 RKO87668.1 - 9.1e-09 35.3 8.3 3.1e-06 27.3 1.7 2.7 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO87668.1 - 1.4e-05 25.5 5.7 0.005 17.6 1.4 2.6 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_5 PF13909.6 RKO87668.1 - 3.5 7.5 6.0 1.7 8.5 2.0 2.3 2 0 0 2 2 2 0 C2H2-type zinc-finger domain zf-H2C2_2 PF13465.6 RKO87668.1 - 7.9 7.1 16.3 0.34 11.4 0.5 3.7 4 0 0 4 4 4 0 Zinc-finger double domain MFS_5 PF05631.14 RKO87670.1 - 5.5e-45 153.8 7.8 4.2e-44 150.9 3.2 2.0 1 1 1 2 2 2 2 Sugar-tranasporters, 12 TM MFS_1 PF07690.16 RKO87670.1 - 4.3e-14 52.2 5.8 4.3e-14 52.2 5.8 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO87670.1 - 0.00024 20.1 4.5 0.00024 20.1 4.5 1.6 1 1 1 2 2 2 1 Sugar (and other) transporter MFS_1_like PF12832.7 RKO87670.1 - 0.0044 15.9 0.5 0.0044 15.9 0.5 1.5 1 1 0 1 1 1 1 MFS_1 like family FPN1 PF06963.12 RKO87670.1 - 0.0083 14.7 0.9 0.013 14.1 0.8 1.4 1 1 0 1 1 1 1 Ferroportin1 (FPN1) FtsX PF02687.21 RKO87670.1 - 2.1 8.9 8.9 11 6.6 8.9 2.0 1 1 0 1 1 1 0 FtsX-like permease family MFS_5 PF05631.14 RKO87671.1 - 1.1e-12 47.6 0.3 1.9e-12 46.8 0.3 1.3 1 0 0 1 1 1 1 Sugar-tranasporters, 12 TM MFS_1 PF07690.16 RKO87671.1 - 4.3e-06 25.9 4.2 5.2e-06 25.6 4.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Mating_C PF12737.7 RKO87672.1 - 0.0052 16.1 0.9 0.0074 15.6 0.9 1.1 1 0 0 1 1 1 1 C-terminal domain of homeodomain 1 Branch PF02485.21 RKO87674.1 - 2.6e-11 43.5 0.0 3.2e-09 36.6 0.0 2.1 1 1 1 2 2 2 2 Core-2/I-Branching enzyme WD40 PF00400.32 RKO87675.1 - 3.5e-09 37.1 7.1 0.025 15.4 0.0 6.9 7 0 0 7 7 7 3 WD domain, G-beta repeat Ge1_WD40 PF16529.5 RKO87675.1 - 0.00027 20.0 0.0 0.0025 16.8 0.0 2.2 2 0 0 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein zf-C2H2 PF00096.26 RKO87676.1 - 9e-10 38.5 19.9 0.00071 19.9 3.1 3.1 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO87676.1 - 4e-07 30.3 16.3 0.0056 17.4 1.6 3.1 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO87676.1 - 0.00029 21.1 0.9 0.00029 21.1 0.9 4.3 4 1 0 4 4 4 1 Zinc-finger double domain zf-C2HC_2 PF13913.6 RKO87676.1 - 0.00037 20.3 0.3 0.0011 18.8 0.3 1.9 1 0 0 1 1 1 1 zinc-finger of a C2HC-type zf-C2H2_aberr PF17017.5 RKO87676.1 - 0.0023 18.1 8.1 0.35 11.0 0.6 3.0 2 1 1 3 3 3 2 Aberrant zinc-finger CHORD PF04968.12 RKO87676.1 - 0.012 16.3 7.3 1.8 9.3 0.4 3.1 2 1 1 3 3 3 0 CHORD zf-C2H2_8 PF15909.5 RKO87676.1 - 0.037 14.3 4.1 3.6 7.9 0.9 2.0 1 1 0 1 1 1 0 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 RKO87676.1 - 0.14 11.9 7.5 0.92 9.3 1.6 2.4 2 0 0 2 2 2 0 zinc-finger C2H2-type CheB_methylest PF01339.17 RKO87677.1 - 0.14 11.9 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 CheB methylesterase Gp-FAR-1 PF05823.12 RKO87679.1 - 0.022 15.1 0.1 0.054 13.8 0.1 1.6 1 1 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) PLC-beta_C PF08703.10 RKO87679.1 - 0.026 14.5 0.8 0.043 13.8 0.3 1.8 2 0 0 2 2 2 0 PLC-beta C terminal HrpB2 PF09487.10 RKO87679.1 - 0.034 14.6 0.5 0.055 13.9 0.1 1.6 2 0 0 2 2 2 0 Bacterial type III secretion protein (HrpB2) TOPRIM_C PF16898.5 RKO87679.1 - 0.068 13.4 1.2 0.32 11.3 0.1 2.2 2 1 0 2 2 2 0 C-terminal associated domain of TOPRIM Tox-REase-3 PF15647.6 RKO87679.1 - 0.087 13.1 0.1 1.6 9.0 0.0 2.3 2 0 0 2 2 2 0 Restriction endonuclease fold toxin 3 P34-Arc PF04045.14 RKO87681.1 - 7e-102 340.2 0.0 8e-102 340.0 0.0 1.0 1 0 0 1 1 1 1 Arp2/3 complex, 34 kD subunit p34-Arc Y_phosphatase PF00102.27 RKO87682.1 - 1.2e-50 172.3 0.0 1.2e-48 165.8 0.0 2.5 1 1 0 1 1 1 1 Protein-tyrosine phosphatase Rhodanese PF00581.20 RKO87682.1 - 0.078 13.5 0.0 0.22 12.1 0.0 1.8 2 0 0 2 2 2 0 Rhodanese-like domain Y_phosphatase3 PF13350.6 RKO87682.1 - 0.091 12.7 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 Tyrosine phosphatase family SWIM PF04434.17 RKO87683.1 - 3.4e-05 23.4 0.2 7.1e-05 22.4 0.2 1.5 1 0 0 1 1 1 1 SWIM zinc finger zf-RING_2 PF13639.6 RKO87683.1 - 0.00078 19.7 4.6 0.0019 18.5 4.6 1.7 1 0 0 1 1 1 1 Ring finger domain PHD PF00628.29 RKO87683.1 - 0.013 15.4 4.0 0.024 14.5 4.0 1.5 1 0 0 1 1 1 0 PHD-finger C1_1 PF00130.22 RKO87683.1 - 0.02 14.8 0.5 0.047 13.6 0.5 1.6 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Zf_RING PF16744.5 RKO87683.1 - 0.087 13.0 0.6 0.087 13.0 0.6 1.7 2 0 0 2 2 2 0 KIAA1045 RING finger zf-C3HC4_4 PF15227.6 RKO87683.1 - 0.1 12.8 2.1 0.28 11.4 2.1 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 RKO87683.1 - 0.3 11.1 6.5 0.64 10.1 6.5 1.6 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_5 PF14634.6 RKO87683.1 - 0.58 10.2 5.5 8.1 6.5 6.3 2.3 1 1 1 2 2 2 0 zinc-RING finger domain TPR_14 PF13428.6 RKO87684.1 - 0.046 14.6 3.8 31 5.7 0.0 4.3 3 1 1 4 4 4 0 Tetratricopeptide repeat PPR_long PF17177.4 RKO87684.1 - 0.079 12.3 0.0 0.28 10.5 0.0 1.7 1 1 1 2 2 2 0 Pentacotripeptide-repeat region of PRORP PPR PF01535.20 RKO87684.1 - 0.12 12.7 0.0 1.3e+02 3.1 0.0 4.3 5 0 0 5 5 5 0 PPR repeat PHAT PF09246.10 RKO87684.1 - 0.18 11.7 0.0 0.3 10.9 0.0 1.3 1 0 0 1 1 1 0 PHAT GCR1_C PF12550.8 RKO87686.1 - 8.6e-07 29.2 0.0 5.7e-06 26.6 0.0 2.1 2 0 0 2 2 2 1 Transcriptional activator of glycolytic enzymes DUF5566 PF17721.1 RKO87686.1 - 0.0079 16.5 0.1 0.012 15.9 0.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5566) S_100 PF01023.19 RKO87686.1 - 0.015 15.0 0.0 0.031 14.0 0.0 1.5 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain LEA_2 PF03168.13 RKO87686.1 - 0.2 12.2 0.3 2.6 8.7 0.0 2.3 2 0 0 2 2 2 0 Late embryogenesis abundant protein Ribosomal_L2_C PF03947.18 RKO87687.1 - 1.5e-46 157.7 2.6 2.7e-46 156.9 2.6 1.4 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 RKO87687.1 - 2.3e-14 53.1 0.5 5.6e-14 51.9 0.1 1.9 2 0 0 2 2 2 1 Ribosomal Proteins L2, RNA binding domain MscL PF01741.18 RKO87688.1 - 0.011 16.0 0.1 0.021 15.1 0.1 1.5 1 0 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL DUF1513 PF07433.11 RKO87691.1 - 0.013 14.6 0.0 0.018 14.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1513) SERTA PF06031.13 RKO87693.1 - 0.036 13.7 0.0 0.12 12.0 0.0 1.9 1 0 0 1 1 1 0 SERTA motif F-box-like PF12937.7 RKO87695.1 - 1.5e-06 28.0 1.0 3e-06 27.0 1.0 1.5 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO87695.1 - 0.001 18.9 0.3 0.002 18.0 0.3 1.4 1 0 0 1 1 1 1 F-box domain WD40 PF00400.32 RKO87696.1 - 9.1e-23 80.1 11.7 0.0008 20.2 0.0 9.1 9 1 0 9 9 9 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO87696.1 - 2.9e-06 27.5 0.0 4.4 7.7 0.0 4.8 4 1 1 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain She9_MDM33 PF05546.11 RKO87697.1 - 6.1e-51 173.1 5.7 7.4e-51 172.8 5.7 1.1 1 0 0 1 1 1 1 She9 / Mdm33 family FAD_binding_3 PF01494.19 RKO87698.1 - 5e-06 26.0 1.6 0.0003 20.2 0.3 2.1 1 1 0 2 2 2 2 FAD binding domain LIME1 PF15332.6 RKO87698.1 - 0.18 11.4 0.0 0.34 10.5 0.0 1.4 1 0 0 1 1 1 0 Lck-interacting transmembrane adapter 1 Ldh_1_N PF00056.23 RKO87700.1 - 5.5e-47 159.4 0.2 7.7e-47 158.9 0.2 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 RKO87700.1 - 1.4e-46 158.4 0.1 2.4e-46 157.7 0.1 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain 3Beta_HSD PF01073.19 RKO87700.1 - 0.00019 20.6 0.0 0.00026 20.1 0.0 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Semialdhyde_dh PF01118.24 RKO87700.1 - 0.026 14.9 0.7 0.054 13.9 0.1 1.9 2 1 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 RKO87700.1 - 0.045 13.1 0.5 0.28 10.5 0.1 2.4 2 1 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FYRC PF05965.14 RKO87703.1 - 1e-07 32.0 0.0 1.3e-07 31.6 0.0 1.2 1 0 0 1 1 1 1 F/Y rich C-terminus RRM_1 PF00076.22 RKO87704.1 - 7.3e-07 28.9 0.1 5.8e-06 26.0 0.0 2.2 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 RKO87704.1 - 0.11 12.6 0.0 0.24 11.6 0.0 1.5 1 0 0 1 1 1 0 RNA recognition motif Yae1_N PF09811.9 RKO87705.1 - 0.0016 18.1 4.2 0.0061 16.2 4.2 2.0 1 1 0 1 1 1 1 Essential protein Yae1, N terminal ATG16 PF08614.11 RKO87706.1 - 4.3e-13 49.9 13.0 8.7e-08 32.6 5.1 2.4 3 0 0 3 3 3 2 Autophagy protein 16 (ATG16) V_ATPase_I PF01496.19 RKO87706.1 - 0.0079 14.2 2.4 0.01 13.8 2.4 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family Flagellar_rod PF05149.12 RKO87706.1 - 0.0087 15.6 6.2 0.0087 15.6 6.2 1.7 2 0 0 2 2 2 1 Paraflagellar rod protein DivIC PF04977.15 RKO87706.1 - 0.32 10.8 6.8 5.4 6.9 4.2 2.6 2 1 0 2 2 2 0 Septum formation initiator DUF4400 PF14348.6 RKO87706.1 - 1.9 8.0 3.3 1.6 8.1 1.8 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4400) PAP2_3 PF14378.6 RKO87708.1 - 1.6e-21 76.9 16.4 2.1e-21 76.5 16.4 1.1 1 0 0 1 1 1 1 PAP2 superfamily PAP2 PF01569.21 RKO87708.1 - 1.8e-06 27.7 11.6 1.8e-06 27.7 11.6 2.0 1 1 1 2 2 2 1 PAP2 superfamily PAP2_C PF14360.6 RKO87708.1 - 0.01 16.4 6.6 0.01 16.4 6.6 2.4 3 0 0 3 3 3 1 PAP2 superfamily C-terminal Ist1 PF03398.14 RKO87709.1 - 6e-62 208.4 9.4 6.6e-62 208.3 9.4 1.0 1 0 0 1 1 1 1 Regulator of Vps4 activity in the MVB pathway Rogdi_lz PF10259.9 RKO87709.1 - 0.039 13.4 0.2 0.05 13.0 0.2 1.4 1 1 0 1 1 1 0 Rogdi leucine zipper containing protein TrbM PF07424.11 RKO87709.1 - 0.069 13.1 0.1 0.093 12.7 0.1 1.3 1 0 0 1 1 1 0 TrbM zf-C2H2 PF00096.26 RKO87710.1 - 0.51 10.9 12.3 3.4 8.3 0.9 3.2 3 0 0 3 3 3 0 Zinc finger, C2H2 type ALS_ss_C PF10369.9 RKO87713.1 - 4e-20 71.8 0.2 5.6e-18 64.9 0.0 2.5 2 0 0 2 2 2 2 Small subunit of acetolactate synthase ACT PF01842.25 RKO87713.1 - 2.8e-13 49.4 0.3 6.9e-13 48.1 0.3 1.6 1 0 0 1 1 1 1 ACT domain ACT_5 PF13710.6 RKO87713.1 - 5.6e-08 32.5 0.5 1.8e-07 30.9 0.1 2.0 2 0 0 2 2 2 1 ACT domain DUF4072 PF13284.6 RKO87713.1 - 0.36 11.3 2.0 3.9 8.0 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4072) Retrotran_gag_2 PF14223.6 RKO87714.1 - 4.1e-06 26.5 0.0 6.1e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type ParA PF10609.9 RKO87715.1 - 3.7e-38 131.4 0.3 4.2e-38 131.2 0.3 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 RKO87715.1 - 3.9e-10 39.9 0.0 4.6e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 RKO87715.1 - 8.5e-05 22.5 0.1 0.00011 22.2 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 RKO87715.1 - 9.9e-05 22.0 0.0 0.00011 21.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 RKO87715.1 - 0.00012 21.4 0.2 0.00015 21.0 0.2 1.3 1 1 0 1 1 1 1 Anion-transporting ATPase Rad17 PF03215.15 RKO87715.1 - 0.0018 18.2 0.0 0.0019 18.1 0.0 1.1 1 0 0 1 1 1 1 Rad17 P-loop domain RsgA_GTPase PF03193.16 RKO87715.1 - 0.0067 16.3 0.1 0.0092 15.9 0.1 1.1 1 0 0 1 1 1 1 RsgA GTPase MipZ PF09140.11 RKO87715.1 - 0.0069 15.7 0.0 0.008 15.5 0.0 1.1 1 0 0 1 1 1 1 ATPase MipZ DnaB_C PF03796.15 RKO87715.1 - 0.0072 15.7 0.0 0.0085 15.4 0.0 1.1 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain TsaE PF02367.17 RKO87715.1 - 0.012 15.6 0.0 0.017 15.1 0.0 1.2 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Fer4_NifH PF00142.18 RKO87715.1 - 0.019 14.4 0.0 0.024 14.1 0.0 1.2 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MeaB PF03308.16 RKO87715.1 - 0.047 12.7 0.0 0.055 12.4 0.0 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB NB-ARC PF00931.22 RKO87715.1 - 0.072 12.3 0.0 0.093 11.9 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain RNA_helicase PF00910.22 RKO87715.1 - 0.083 13.3 0.0 0.12 12.8 0.0 1.4 1 0 0 1 1 1 0 RNA helicase NACHT PF05729.12 RKO87715.1 - 0.1 12.5 0.1 0.17 11.8 0.1 1.3 1 1 0 1 1 1 0 NACHT domain AAA_16 PF13191.6 RKO87715.1 - 0.1 12.9 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 RKO87715.1 - 0.17 12.4 0.0 0.21 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain CLP1_P PF16575.5 RKO87715.1 - 0.21 11.4 0.0 0.29 10.9 0.0 1.2 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop RRM_1 PF00076.22 RKO87716.1 - 1.3e-08 34.6 0.3 2.5e-08 33.6 0.3 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Torus PF16131.5 RKO87716.1 - 1e-07 32.6 0.0 1.8e-07 31.8 0.0 1.4 1 0 0 1 1 1 1 Torus domain zf_CCCH_4 PF18345.1 RKO87716.1 - 3.2e-07 30.2 2.1 1.3e-06 28.2 2.1 2.2 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH_4 PF18044.1 RKO87716.1 - 0.0003 20.5 3.6 0.00082 19.1 3.6 1.8 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH PF00642.24 RKO87716.1 - 0.00032 20.5 2.2 0.00032 20.5 2.2 2.5 3 0 0 3 3 3 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_3 PF15663.5 RKO87716.1 - 0.00063 19.9 0.2 0.0022 18.2 0.1 2.0 2 0 0 2 2 2 1 Zinc-finger containing family zf-CCCH_2 PF14608.6 RKO87716.1 - 0.0016 18.9 2.0 0.0016 18.9 2.0 2.5 3 0 0 3 3 3 1 RNA-binding, Nab2-type zinc finger Nup35_RRM_2 PF14605.6 RKO87716.1 - 0.011 15.7 0.1 0.02 14.9 0.1 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif FYVE PF01363.21 RKO87716.1 - 0.62 10.2 6.7 0.14 12.3 3.4 1.8 2 1 0 2 2 2 0 FYVE zinc finger zf-MYND PF01753.18 RKO87718.1 - 2.5e-06 27.5 17.0 9.5e-06 25.6 17.0 2.1 1 0 0 1 1 1 1 MYND finger HIG_1_N PF04588.13 RKO87719.1 - 0.056 13.7 0.5 0.11 12.8 0.5 1.5 1 0 0 1 1 1 0 Hypoxia induced protein conserved region EBV-NA3 PF05009.12 RKO87720.1 - 0.89 9.0 2.1 2 7.9 2.1 1.5 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) WD40 PF00400.32 RKO87723.1 - 0.011 16.6 0.1 19 6.4 0.0 4.6 4 1 1 5 5 5 0 WD domain, G-beta repeat HELP PF03451.14 RKO87723.1 - 0.058 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 HELP motif MMS1_N PF10433.9 RKO87723.1 - 0.11 11.0 0.0 0.35 9.4 0.0 1.7 2 0 0 2 2 2 0 Mono-functional DNA-alkylating methyl methanesulfonate N-term NolX PF05819.11 RKO87723.1 - 5.3 6.3 4.8 8.2 5.6 4.8 1.2 1 0 0 1 1 1 0 NolX protein SAP130_C PF16014.5 RKO87723.1 - 5.8 5.9 5.6 9.3 5.2 5.6 1.2 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus GCN5L1 PF06320.13 RKO87724.1 - 6.8e-27 93.9 1.0 7.2e-27 93.8 1.0 1.0 1 0 0 1 1 1 1 GCN5-like protein 1 (GCN5L1) FTHFS PF01268.19 RKO87726.1 - 2.9e-26 91.8 0.1 3.5e-26 91.5 0.1 1.0 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase DAGK_cat PF00781.24 RKO87727.1 - 2.3e-11 43.4 0.0 3.4e-11 42.9 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain DAGK_acc PF00609.19 RKO87727.1 - 0.0083 16.5 0.0 0.013 15.9 0.0 1.2 1 0 0 1 1 1 1 Diacylglycerol kinase accessory domain PAS PF00989.25 RKO87728.1 - 1.7e-11 44.1 0.0 1.7e-11 44.1 0.0 3.3 3 1 0 3 3 3 1 PAS fold PAS_9 PF13426.7 RKO87728.1 - 1.1e-10 41.7 0.7 5.7e-10 39.4 0.0 2.7 3 0 0 3 3 3 1 PAS domain PAS_4 PF08448.10 RKO87728.1 - 9.3e-07 29.1 0.0 4.2e-06 27.0 0.0 2.2 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.7 RKO87728.1 - 0.00017 21.5 0.0 0.00049 20.1 0.0 1.7 1 0 0 1 1 1 1 PAS domain DUF1490 PF07371.12 RKO87728.1 - 0.0068 16.5 1.4 0.0068 16.5 1.4 2.9 2 1 0 2 2 2 1 Protein of unknown function (DUF1490) PKK PF12474.8 RKO87728.1 - 0.022 14.9 1.6 0.022 14.9 1.6 5.7 3 2 1 4 4 4 0 Polo kinase kinase E1-E2_ATPase PF00122.20 RKO87729.1 - 5.9e-06 25.9 6.3 0.00021 20.9 0.4 2.5 3 0 0 3 3 3 2 E1-E2 ATPase Yae1_N PF09811.9 RKO87730.1 - 2.9e-14 52.5 7.9 3.7e-14 52.1 7.9 1.1 1 0 0 1 1 1 1 Essential protein Yae1, N terminal Uricase PF01014.18 RKO87732.1 - 1.5e-57 193.5 0.2 1.1e-31 109.8 0.1 2.0 2 0 0 2 2 2 2 Uricase FolB PF02152.18 RKO87732.1 - 0.0076 16.8 0.1 0.02 15.5 0.1 1.6 1 0 0 1 1 1 1 Dihydroneopterin aldolase Kelch_6 PF13964.6 RKO87733.1 - 1.3e-09 38.0 1.9 0.066 13.5 0.0 4.4 4 0 0 4 4 4 3 Kelch motif Kelch_1 PF01344.25 RKO87733.1 - 2.6e-09 36.5 0.5 0.0053 16.3 0.0 4.3 4 0 0 4 4 4 3 Kelch motif Kelch_2 PF07646.15 RKO87733.1 - 0.0008 19.3 2.3 7.2 6.8 0.0 4.7 5 0 0 5 5 5 1 Kelch motif Kelch_3 PF13415.6 RKO87733.1 - 0.051 13.9 0.1 0.051 13.9 0.1 5.0 5 1 0 5 5 5 0 Galactose oxidase, central domain Kelch_4 PF13418.6 RKO87733.1 - 0.099 12.7 14.0 0.37 10.8 0.7 5.1 4 1 1 5 5 5 0 Galactose oxidase, central domain Nitrate_red_gam PF02665.14 RKO87733.1 - 0.14 11.7 0.0 0.21 11.1 0.0 1.2 1 0 0 1 1 1 0 Nitrate reductase gamma subunit DUF2076 PF09849.9 RKO87733.1 - 0.19 11.7 1.1 0.31 11.0 1.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) DUF1459 PF07312.11 RKO87734.1 - 0.07 13.4 0.1 0.13 12.5 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1459) PHD PF00628.29 RKO87735.1 - 4.8e-13 48.8 6.6 5.7e-13 48.5 6.6 1.1 1 0 0 1 1 1 1 PHD-finger PHD_2 PF13831.6 RKO87735.1 - 1.5e-05 24.4 1.2 2.5e-05 23.7 1.2 1.4 1 0 0 1 1 1 1 PHD-finger zf-PHD-like PF15446.6 RKO87735.1 - 0.021 14.4 1.1 0.027 14.1 0.1 1.6 1 1 0 1 1 1 0 PHD/FYVE-zinc-finger like domain zf-RING_2 PF13639.6 RKO87735.1 - 0.024 15.0 5.3 0.033 14.5 5.3 1.2 1 0 0 1 1 1 0 Ring finger domain PHF5 PF03660.14 RKO87735.1 - 0.064 13.5 4.9 0.076 13.2 4.9 1.1 1 0 0 1 1 1 0 PHF5-like protein DUF1016_N PF17761.1 RKO87735.1 - 0.067 13.4 0.0 0.071 13.3 0.0 1.0 1 0 0 1 1 1 0 DUF1016 N-terminal domain Laminin_EGF PF00053.24 RKO87735.1 - 0.099 12.8 5.4 0.57 10.4 1.2 2.2 1 1 1 2 2 2 0 Laminin EGF domain C1_1 PF00130.22 RKO87735.1 - 0.15 12.0 5.7 0.1 12.5 0.8 2.1 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) KH_8 PF17903.1 RKO87736.1 - 2.4e-06 27.5 0.0 3.2e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Krr1 KH1 domain TFIIA PF03153.13 RKO87737.1 - 1 9.3 8.6 1.4 8.8 8.6 1.6 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit HMG_box PF00505.19 RKO87739.1 - 6.1e-19 68.2 0.5 1.1e-18 67.3 0.5 1.5 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 RKO87739.1 - 1.6e-13 51.0 0.2 3.2e-13 50.0 0.2 1.5 1 0 0 1 1 1 1 HMG-box domain CHDNT PF08073.12 RKO87739.1 - 0.091 12.7 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 CHDNT (NUC034) domain Med3 PF11593.8 RKO87739.1 - 2.4 7.2 16.7 4 6.5 16.7 1.2 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal MULE PF10551.9 RKO87741.1 - 0.0047 17.3 0.1 0.033 14.6 0.1 2.2 1 1 0 1 1 1 1 MULE transposase domain TAN PF11640.8 RKO87742.1 - 3.2e-21 76.0 0.0 1.3e-20 74.0 0.0 2.1 2 0 0 2 2 2 1 Telomere-length maintenance and DNA damage repair WD40 PF00400.32 RKO87745.1 - 4.2e-25 87.5 12.4 1.7e-05 25.5 0.2 7.0 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO87745.1 - 2e-09 37.6 0.0 0.019 15.2 0.0 4.2 2 2 1 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 RKO87745.1 - 7.4e-08 32.5 0.1 0.0013 18.7 0.0 3.3 1 1 2 3 3 3 3 Eukaryotic translation initiation factor eIF2A Nbas_N PF15492.6 RKO87745.1 - 0.00042 19.7 0.1 0.052 12.9 0.0 2.4 2 0 0 2 2 2 2 Neuroblastoma-amplified sequence, N terminal Ge1_WD40 PF16529.5 RKO87745.1 - 0.0035 16.3 0.1 0.68 8.8 0.0 2.9 2 2 1 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein PD40 PF07676.12 RKO87745.1 - 0.12 12.4 0.4 0.12 12.4 0.4 2.5 3 0 0 3 3 3 0 WD40-like Beta Propeller Repeat PQQ_3 PF13570.6 RKO87745.1 - 0.13 12.7 2.2 1.1 9.8 0.0 3.3 3 0 0 3 3 3 0 PQQ-like domain VWA_3 PF13768.6 RKO87746.1 - 2.4e-05 24.3 0.0 7.4e-05 22.7 0.0 1.8 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 RKO87746.1 - 0.065 13.5 0.0 0.12 12.7 0.0 1.4 1 0 0 1 1 1 0 von Willebrand factor type A domain VWA_2 PF13519.6 RKO87746.1 - 0.18 12.4 0.0 0.47 11.1 0.0 1.7 1 0 0 1 1 1 0 von Willebrand factor type A domain FtsJ PF01728.19 RKO87747.1 - 0.00039 20.6 0.0 0.00057 20.0 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase NUP50 PF08911.11 RKO87747.1 - 0.26 12.0 2.0 0.3 11.8 0.8 1.7 2 0 0 2 2 2 0 NUP50 (Nucleoporin 50 kDa) Metallophos_2 PF12850.7 RKO87748.1 - 5e-22 78.9 0.2 6e-22 78.6 0.2 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 RKO87748.1 - 0.00011 22.8 1.5 0.24 11.9 0.0 2.3 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase PQ-loop PF04193.14 RKO87749.1 - 2.6e-10 39.9 0.4 5.1e-10 39.0 0.4 1.5 1 0 0 1 1 1 1 PQ loop repeat F-box-like PF12937.7 RKO87750.1 - 0.0013 18.6 0.2 0.0031 17.4 0.2 1.7 1 0 0 1 1 1 1 F-box-like MIF4G PF02854.19 RKO87750.1 - 0.0018 17.9 0.0 0.0029 17.3 0.0 1.2 1 0 0 1 1 1 1 MIF4G domain Otopetrin PF03189.13 RKO87751.1 - 0.083 11.7 0.7 0.11 11.3 0.7 1.1 1 0 0 1 1 1 0 Otopetrin Cwf_Cwc_15 PF04889.12 RKO87754.1 - 0.038 13.7 1.9 0.05 13.3 1.9 1.2 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein PBP1_TM PF14812.6 RKO87754.1 - 0.049 14.0 2.1 0.11 12.9 2.1 1.6 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal RXT2_N PF08595.11 RKO87754.1 - 0.12 12.4 0.3 0.17 11.9 0.3 1.2 1 0 0 1 1 1 0 RXT2-like, N-terminal EBV-NA3 PF05009.12 RKO87754.1 - 0.71 9.3 3.5 1.1 8.8 3.5 1.2 1 0 0 1 1 1 0 Epstein-Barr virus nuclear antigen 3 (EBNA-3) NOA36 PF06524.12 RKO87754.1 - 7.6 5.8 8.6 12 5.1 8.6 1.2 1 0 0 1 1 1 0 NOA36 protein GTP_EFTU PF00009.27 RKO87755.1 - 8.7e-67 224.4 0.4 1.1e-66 224.1 0.4 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 RKO87755.1 - 5.7e-12 45.9 0.0 1.4e-11 44.6 0.0 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 RKO87755.1 - 0.0003 20.9 0.3 0.0007 19.7 0.3 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 RKO87755.1 - 0.1 12.0 0.1 0.25 10.8 0.0 1.5 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Acyl_CoA_thio PF02551.15 RKO87756.1 - 5e-29 100.8 0.0 5.8e-29 100.6 0.0 1.0 1 0 0 1 1 1 1 Acyl-CoA thioesterase 4HBT_3 PF13622.6 RKO87756.1 - 2.1e-24 87.2 0.0 2.3e-24 87.0 0.0 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily Mito_fiss_reg PF05308.11 RKO87759.1 - 0.011 15.9 7.4 0.017 15.2 7.4 1.4 1 0 0 1 1 1 0 Mitochondrial fission regulator CAP_N PF01213.19 RKO87759.1 - 0.26 10.7 13.2 0.41 10.1 13.2 1.4 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal DUF3292 PF11696.8 RKO87759.1 - 0.34 9.2 4.7 0.46 8.8 4.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) PH PF00169.29 RKO87760.1 - 0.00022 21.7 0.0 0.00039 20.9 0.0 1.4 1 0 0 1 1 1 1 PH domain DHC_N1 PF08385.12 RKO87762.1 - 3e-113 379.4 3.1 3e-113 379.4 3.1 1.9 2 0 0 2 2 2 1 Dynein heavy chain, N-terminal region 1 Sec34 PF04136.15 RKO87762.1 - 0.013 15.4 2.3 0.63 9.9 0.6 3.7 3 1 0 3 3 3 0 Sec34-like family Tho2 PF11262.8 RKO87762.1 - 0.023 13.9 0.0 0.078 12.2 0.0 1.9 2 1 0 2 2 2 0 Transcription factor/nuclear export subunit protein 2 THP2 PF09432.10 RKO87762.1 - 1.4 8.9 4.0 28 4.8 0.3 3.6 3 0 0 3 3 3 0 Tho complex subunit THP2 Peptidase_S10 PF00450.22 RKO87763.1 - 0.042 13.3 0.0 0.052 13.0 0.0 1.1 1 0 0 1 1 1 0 Serine carboxypeptidase Peptidase_S10 PF00450.22 RKO87764.1 - 2e-09 37.4 0.4 2.4e-09 37.1 0.4 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase ABC2_membrane_3 PF12698.7 RKO87765.1 - 4.4e-20 72.1 15.7 3.1e-19 69.3 12.2 2.0 2 0 0 2 2 2 2 ABC-2 family transporter protein NAC PF01849.18 RKO87766.1 - 4.7e-14 52.1 0.8 7.5e-14 51.5 0.1 1.7 2 0 0 2 2 2 1 NAC domain Allantoicase PF03561.15 RKO87767.1 - 7e-85 282.2 0.0 1.7e-43 148.0 0.0 2.0 2 0 0 2 2 2 2 Allantoicase repeat FAD_binding_1 PF00667.20 RKO87768.1 - 0.045 13.3 0.0 0.069 12.7 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain GCV_T PF01571.21 RKO87770.1 - 2.9e-44 151.4 0.1 3.3e-44 151.2 0.1 1.0 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain DEAD PF00270.29 RKO87772.1 - 1e-17 64.5 0.0 1.9e-17 63.6 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO87772.1 - 2.7e-16 59.9 0.0 1.4e-14 54.4 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain RecQ_Zn_bind PF16124.5 RKO87772.1 - 1.6e-05 25.5 0.0 3.7e-05 24.3 0.0 1.6 1 0 0 1 1 1 1 RecQ zinc-binding DEAD PF00270.29 RKO87773.1 - 8.3e-19 68.0 0.0 9.4e-19 67.8 0.0 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 RKO87773.1 - 0.00031 20.8 0.0 0.00045 20.3 0.0 1.2 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_30 PF13604.6 RKO87773.1 - 0.07 12.9 0.0 0.091 12.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain Glyco_hydro_28 PF00295.17 RKO87774.1 - 1.7e-09 37.2 0.1 2.2e-09 36.9 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 E1-E2_ATPase PF00122.20 RKO87775.1 - 1.7e-20 73.3 0.1 1.7e-20 73.3 0.1 1.6 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 RKO87775.1 - 0.0046 16.6 0.0 0.011 15.4 0.0 1.6 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus PapD-like PF14874.6 RKO87776.1 - 9.8e-15 54.6 0.1 1.6e-14 53.9 0.1 1.3 1 0 0 1 1 1 1 Flagellar-associated PapD-like ASH PF15780.5 RKO87776.1 - 0.00032 20.8 0.0 0.00079 19.6 0.0 1.6 1 0 0 1 1 1 1 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin DUF1573 PF07610.11 RKO87776.1 - 0.0005 20.0 0.0 0.00082 19.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1573) Motile_Sperm PF00635.26 RKO87776.1 - 0.0083 16.0 0.0 0.014 15.2 0.0 1.4 1 0 0 1 1 1 1 MSP (Major sperm protein) domain DUF1604 PF07713.13 RKO87777.1 - 3.1 7.7 6.4 0.14 12.0 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1604) GST_C PF00043.25 RKO87779.1 - 0.009 16.2 0.0 0.012 15.8 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 RKO87779.1 - 0.16 12.0 0.1 0.22 11.6 0.1 1.4 1 1 0 1 1 1 0 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 RKO87780.1 - 6.4e-13 48.9 0.0 6.7e-12 45.7 0.0 2.2 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 RKO87780.1 - 3.5e-09 36.9 0.0 9.6e-08 32.3 0.0 2.5 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 RKO87780.1 - 5.1e-09 36.3 0.0 9.6e-09 35.4 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Actin PF00022.19 RKO87781.1 - 2.6e-125 418.2 0.0 1e-124 416.3 0.0 1.7 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 RKO87781.1 - 0.00095 18.1 0.0 1 8.1 0.0 2.4 2 1 0 2 2 2 2 MreB/Mbl protein Bap31 PF05529.12 RKO87782.1 - 5.2e-27 94.3 0.4 6.3e-27 94.1 0.4 1.1 1 0 0 1 1 1 1 Bap31/Bap29 transmembrane region Plasmid_stab_B PF10784.9 RKO87782.1 - 0.047 13.5 0.1 0.094 12.6 0.1 1.5 1 0 0 1 1 1 0 Plasmid stability protein Cauli_VI PF01693.16 RKO87783.1 - 4.6e-16 58.8 0.2 8.8e-16 57.9 0.2 1.5 1 0 0 1 1 1 1 Caulimovirus viroplasmin Frataxin_Cyay PF01491.16 RKO87784.1 - 4.1e-26 91.2 0.0 4.4e-26 91.1 0.0 1.0 1 0 0 1 1 1 1 Frataxin-like domain Ehbp PF10622.9 RKO87784.1 - 0.15 12.1 0.0 0.18 11.9 0.0 1.0 1 0 0 1 1 1 0 Energy-converting hydrogenase B subunit P (EhbP) WD40 PF00400.32 RKO87785.1 - 9.8e-21 73.7 9.5 7e-07 29.9 0.0 6.3 6 0 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO87785.1 - 7.9e-17 61.3 3.6 9.6e-07 29.0 0.1 4.5 2 2 4 6 6 6 2 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 RKO87785.1 - 2.4e-07 30.8 0.3 0.0075 16.2 0.2 3.3 2 1 1 3 3 3 3 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 RKO87785.1 - 2.7e-05 23.3 0.1 0.0099 14.9 0.0 3.4 1 1 0 3 3 3 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Nbas_N PF15492.6 RKO87785.1 - 0.0033 16.8 0.2 1 8.7 0.0 2.7 2 1 1 3 3 3 2 Neuroblastoma-amplified sequence, N terminal PD40 PF07676.12 RKO87785.1 - 0.15 12.0 0.3 36 4.5 0.0 3.5 4 0 0 4 4 4 0 WD40-like Beta Propeller Repeat IKI3 PF04762.12 RKO87785.1 - 0.21 9.6 0.7 2.8 5.8 0.0 2.3 3 0 0 3 3 3 0 IKI3 family Clat_adaptor_s PF01217.20 RKO87786.1 - 1.5e-12 47.7 0.3 1.6e-12 47.6 0.3 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain DUF1460 PF07313.12 RKO87786.1 - 0.018 14.5 0.1 0.018 14.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1460) PIG-P PF08510.12 RKO87787.1 - 1.8e-35 121.4 0.8 2.1e-35 121.3 0.8 1.0 1 0 0 1 1 1 1 PIG-P DPM2 PF07297.12 RKO87787.1 - 0.045 14.1 8.0 0.066 13.5 8.0 1.2 1 0 0 1 1 1 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) DUF3261 PF11659.8 RKO87787.1 - 0.19 11.6 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3261) Dexa_ind PF15198.6 RKO87787.1 - 0.52 10.4 2.7 0.77 9.9 2.7 1.4 1 0 0 1 1 1 0 Dexamethasone-induced Ribosomal_L18 PF17135.4 RKO87788.1 - 3.8e-94 313.4 4.7 4.2e-94 313.2 4.7 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 RKO87788.1 - 0.00047 20.8 0.1 0.0022 18.7 0.1 2.1 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Clat_adaptor_s PF01217.20 RKO87789.1 - 3.7e-18 65.8 0.4 4.3e-18 65.6 0.4 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain DUF1460 PF07313.12 RKO87789.1 - 0.023 14.1 0.1 0.023 14.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1460) Sec5 PF15469.6 RKO87789.1 - 0.051 13.4 0.0 0.057 13.2 0.0 1.1 1 0 0 1 1 1 0 Exocyst complex component Sec5 PAM2 PF07145.15 RKO87790.1 - 0.0083 15.7 0.1 0.028 14.1 0.1 2.0 1 0 0 1 1 1 1 Ataxin-2 C-terminal region PEHE PF15275.6 RKO87790.1 - 0.11 13.1 1.3 0.14 12.8 0.2 1.7 2 0 0 2 2 2 0 PEHE domain Glyco_hydro_38C PF07748.13 RKO87791.1 - 3.8e-53 180.7 0.0 5.5e-53 180.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Alpha-mann_mid PF09261.11 RKO87791.1 - 2.5e-26 91.7 0.0 3.9e-26 91.0 0.0 1.3 1 0 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro38C2 PF17677.1 RKO87791.1 - 9.4e-09 35.3 0.0 2.3e-08 34.0 0.0 1.7 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal beta sandwich domain Glyco_hydro_38N PF01074.22 RKO87791.1 - 0.036 13.4 0.0 0.058 12.8 0.0 1.3 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 N-terminal domain DNA_processg_A PF02481.15 RKO87793.1 - 0.043 13.1 0.1 3.9 6.6 0.0 2.2 2 0 0 2 2 2 0 DNA recombination-mediator protein A CLP1_P PF16575.5 RKO87795.1 - 7.5e-52 175.9 0.0 1.7e-51 174.7 0.0 1.6 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop Clp1 PF06807.14 RKO87795.1 - 3.1e-31 108.2 0.0 4.8e-31 107.6 0.0 1.3 1 0 0 1 1 1 1 Pre-mRNA cleavage complex II protein Clp1 CLP1_N PF16573.5 RKO87795.1 - 1.8e-12 47.3 0.1 1.8e-10 40.9 0.1 2.4 1 1 0 1 1 1 1 N-terminal beta-sandwich domain of polyadenylation factor MMR_HSR1 PF01926.23 RKO87795.1 - 0.00081 19.5 0.0 0.0015 18.6 0.0 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_24 PF13479.6 RKO87795.1 - 0.0049 16.6 0.0 0.0082 15.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_35 PF14516.6 RKO87795.1 - 0.029 13.2 0.0 0.042 12.7 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain ATP_bind_1 PF03029.17 RKO87795.1 - 0.039 13.7 0.0 0.056 13.2 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Roc PF08477.13 RKO87795.1 - 0.044 14.0 0.0 0.085 13.1 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_10 PF12846.7 RKO87795.1 - 0.06 12.3 0.0 0.091 11.7 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain AAA_16 PF13191.6 RKO87795.1 - 0.081 13.3 0.0 0.18 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain CbiA PF01656.23 RKO87795.1 - 0.1 12.6 0.0 0.19 11.8 0.0 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain IstB_IS21 PF01695.17 RKO87795.1 - 0.12 12.1 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein Kinesin PF00225.23 RKO87796.1 - 1.6e-94 316.6 0.3 2.3e-94 316.0 0.3 1.2 1 1 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO87796.1 - 5.3e-20 71.9 0.1 2.2e-19 69.9 0.1 2.0 1 1 0 1 1 1 1 Microtubule binding Phosphoesterase PF04185.14 RKO87797.1 - 0.00092 18.5 0.0 0.0012 18.1 0.0 1.1 1 0 0 1 1 1 1 Phosphoesterase family SAMP PF05924.11 RKO87797.1 - 0.12 11.7 0.1 0.22 10.9 0.1 1.4 1 0 0 1 1 1 0 SAMP Motif FmdA_AmdA PF03069.15 RKO87798.1 - 8.2e-26 90.7 0.2 8.9e-26 90.6 0.2 1.0 1 0 0 1 1 1 1 Acetamidase/Formamidase family Polyketide_cyc2 PF10604.9 RKO87798.1 - 0.035 14.4 0.1 0.04 14.2 0.1 1.1 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport HEAT_EZ PF13513.6 RKO87799.1 - 8.7e-05 22.9 2.9 0.06 13.9 0.0 3.8 4 0 0 4 4 4 2 HEAT-like repeat Cnd3 PF12719.7 RKO87799.1 - 0.058 12.6 0.2 0.2 10.8 0.1 1.9 2 1 0 2 2 2 0 Nuclear condensing complex subunits, C-term domain HEAT_2 PF13646.6 RKO87800.1 - 5.1e-08 33.2 7.7 0.079 13.4 0.5 5.2 1 1 2 4 4 4 4 HEAT repeats HEAT_EZ PF13513.6 RKO87800.1 - 1.4e-07 31.8 9.4 0.031 14.8 0.0 5.4 5 1 0 5 5 5 3 HEAT-like repeat HEAT PF02985.22 RKO87800.1 - 1.4e-05 24.9 19.1 10 6.7 0.2 7.7 6 1 2 8 8 8 4 HEAT repeat Vac14_Fab1_bd PF12755.7 RKO87800.1 - 0.0033 18.0 0.0 6.7 7.4 0.0 3.9 3 1 1 4 4 4 1 Vacuolar 14 Fab1-binding region MMS19_N PF14500.6 RKO87800.1 - 0.064 12.8 0.0 5.8 6.4 0.0 2.2 2 0 0 2 2 2 0 Dos2-interacting transcription regulator of RNA-Pol-II Response_reg PF00072.24 RKO87802.1 - 1.2e-05 25.5 0.1 2.2e-05 24.6 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain DUF624 PF04854.14 RKO87802.1 - 0.03 14.4 2.9 0.13 12.4 0.1 2.9 2 2 0 2 2 2 0 Protein of unknown function, DUF624 Lactonase PF10282.9 RKO87803.1 - 7.5e-83 278.6 0.0 9.5e-83 278.3 0.0 1.0 1 0 0 1 1 1 1 Lactonase, 7-bladed beta-propeller ubiquitin PF00240.23 RKO87804.1 - 3.9e-08 32.9 0.0 4.5e-08 32.7 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin family Blt1 PF12754.7 RKO87804.1 - 0.03 14.6 0.0 0.036 14.4 0.0 1.0 1 0 0 1 1 1 0 Blt1 N-terminal domain USP7_ICP0_bdg PF12436.8 RKO87804.1 - 0.19 11.0 0.0 0.19 11.0 0.0 1.0 1 0 0 1 1 1 0 ICP0-binding domain of Ubiquitin-specific protease 7 F-box-like PF12937.7 RKO87805.1 - 0.00068 19.5 0.3 0.0012 18.7 0.3 1.4 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO87805.1 - 0.0021 17.9 0.1 0.0038 17.1 0.1 1.5 1 0 0 1 1 1 1 F-box domain DUF35_N PF12172.8 RKO87805.1 - 0.016 15.1 1.4 0.039 13.8 1.4 1.6 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) F-box_5 PF18511.1 RKO87805.1 - 0.13 11.9 2.1 0.38 10.4 2.1 1.8 1 1 0 1 1 1 0 F-box RdRP_3 PF00998.23 RKO87806.1 - 0.2 10.3 0.0 0.76 8.4 0.0 1.7 2 0 0 2 2 2 0 Viral RNA dependent RNA polymerase CTK3 PF12243.8 RKO87807.1 - 6.9e-05 22.8 0.1 0.00099 19.1 0.0 2.5 2 1 0 2 2 2 1 CTD kinase subunit gamma CTK3 CTK3_C PF12350.8 RKO87807.1 - 0.0044 17.1 4.9 0.0044 17.1 4.9 1.9 2 0 0 2 2 2 1 CTD kinase subunit gamma CTK3 C-terminus FlhD PF05247.13 RKO87808.1 - 0.028 14.7 0.0 0.056 13.7 0.0 1.5 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhD) RPN2_C PF18004.1 RKO87809.1 - 5.9e-08 32.8 0.0 8.3e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 26S proteasome regulatory subunit RPN2 C-terminal domain PC_rep PF01851.22 RKO87809.1 - 3e-06 27.4 0.7 0.0014 19.0 0.2 2.6 2 0 0 2 2 2 2 Proteasome/cyclosome repeat HEAT_EZ PF13513.6 RKO87809.1 - 0.12 12.9 0.1 0.22 12.1 0.1 1.5 1 0 0 1 1 1 0 HEAT-like repeat zf-RING_11 PF17123.5 RKO87810.1 - 2.1e-11 43.3 10.9 2.1e-11 43.3 10.9 1.6 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_2 PF13639.6 RKO87810.1 - 1.1e-08 35.2 10.9 1.3e-08 35.0 10.9 1.1 1 0 0 1 1 1 1 Ring finger domain zf-ANAPC11 PF12861.7 RKO87810.1 - 2.9e-05 24.0 4.5 3.3e-05 23.8 4.5 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_2 PF13923.6 RKO87810.1 - 0.00019 21.2 11.8 0.00027 20.7 11.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO87810.1 - 0.00026 20.8 11.3 0.00038 20.3 11.3 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 RKO87810.1 - 0.0015 18.8 12.9 0.0032 17.7 12.9 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 RKO87810.1 - 0.005 16.8 7.3 0.005 16.8 7.3 1.4 1 1 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 RKO87810.1 - 0.0051 16.7 13.5 0.0086 16.0 13.5 1.4 1 1 0 1 1 1 1 zinc-RING finger domain PHD PF00628.29 RKO87810.1 - 0.0057 16.5 7.9 0.008 16.0 7.9 1.3 1 0 0 1 1 1 1 PHD-finger Zn_ribbon_17 PF17120.5 RKO87810.1 - 0.74 9.5 9.1 1.3 8.7 9.0 1.5 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type Pkinase PF00069.25 RKO87812.1 - 4.3e-15 55.8 0.0 5e-15 55.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO87812.1 - 1.4e-10 40.9 0.0 1.6e-10 40.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase EMP24_GP25L PF01105.24 RKO87814.1 - 2.6e-46 157.8 0.0 3e-46 157.7 0.0 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD FlxA PF14282.6 RKO87814.1 - 0.072 13.1 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 FlxA-like protein DivIVA PF05103.13 RKO87814.1 - 0.09 12.9 0.2 0.12 12.4 0.2 1.2 1 0 0 1 1 1 0 DivIVA protein GTP_EFTU PF00009.27 RKO87815.1 - 2e-20 73.2 0.1 3e-20 72.6 0.1 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 RKO87815.1 - 1.5e-07 31.7 0.4 6e-07 29.8 0.1 2.2 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU_D3 PF03143.17 RKO87815.1 - 4.6e-05 23.7 0.2 0.00017 21.9 0.2 2.1 1 1 0 1 1 1 1 Elongation factor Tu C-terminal domain MMR_HSR1 PF01926.23 RKO87815.1 - 0.0018 18.4 0.0 0.0048 17.0 0.0 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase PduV-EutP PF10662.9 RKO87815.1 - 0.0041 16.9 0.7 2.8 7.7 0.1 3.5 2 1 1 3 3 3 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 RKO87815.1 - 0.011 15.6 0.9 3.1 7.7 0.2 2.3 2 0 0 2 2 2 0 RsgA GTPase Roc PF08477.13 RKO87815.1 - 0.07 13.4 0.2 2.5 8.3 0.1 2.6 1 1 1 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Glyco_hydro_28 PF00295.17 RKO87816.1 - 0.082 11.9 0.4 0.089 11.8 0.4 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 28 MaoC_dehydratas PF01575.19 RKO87817.1 - 2.7e-29 101.2 0.0 4.2e-29 100.6 0.0 1.3 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 RKO87817.1 - 2.1e-07 31.2 0.0 8.7e-05 22.7 0.0 2.5 2 1 0 2 2 2 2 N-terminal half of MaoC dehydratase CSN5_C PF18323.1 RKO87820.1 - 0.038 14.9 1.1 16 6.5 0.0 2.4 2 0 0 2 2 2 0 Cop9 signalosome subunit 5 C-terminal domain PPP5 PF08321.12 RKO87821.1 - 0.0012 19.1 0.0 0.0026 18.0 0.0 1.5 1 0 0 1 1 1 1 PPP5 TPR repeat region Flavokinase PF01687.17 RKO87822.1 - 2.1e-27 95.6 0.0 2.6e-27 95.3 0.0 1.0 1 0 0 1 1 1 1 Riboflavin kinase Med4 PF10018.9 RKO87825.1 - 4e-26 91.9 8.8 2.8e-25 89.2 8.8 1.9 1 1 0 1 1 1 1 Vitamin-D-receptor interacting Mediator subunit 4 Ead_Ea22 PF13935.6 RKO87825.1 - 0.0058 17.3 0.1 0.0094 16.6 0.1 1.4 1 0 0 1 1 1 1 Ead/Ea22-like protein Lebercilin PF15619.6 RKO87825.1 - 0.0076 15.9 3.0 0.0076 15.9 3.0 1.5 2 0 0 2 2 2 1 Ciliary protein causing Leber congenital amaurosis disease DUF4315 PF14193.6 RKO87825.1 - 0.0085 16.1 4.8 0.017 15.2 4.8 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4315) HMMR_N PF15905.5 RKO87825.1 - 0.023 14.2 2.9 0.032 13.7 2.9 1.2 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal DHR10 PF18595.1 RKO87825.1 - 0.043 13.9 6.1 0.092 12.8 6.1 1.5 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain DUF148 PF02520.17 RKO87825.1 - 0.068 13.3 2.8 0.085 13.0 1.8 1.6 2 0 0 2 2 2 0 Domain of unknown function DUF148 DUF1664 PF07889.12 RKO87825.1 - 0.35 10.9 1.8 0.61 10.1 1.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) A_deaminase PF00962.22 RKO87826.1 - 3.5e-12 46.3 0.0 4.5e-12 46.0 0.0 1.2 1 0 0 1 1 1 1 Adenosine/AMP deaminase PhoLip_ATPase_C PF16212.5 RKO87827.1 - 0.0086 15.8 0.0 0.011 15.5 0.0 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal PPR_2 PF13041.6 RKO87828.1 - 2.9e-10 40.2 0.0 1.1e-07 31.9 0.0 4.3 4 0 0 4 4 4 1 PPR repeat family PPR_3 PF13812.6 RKO87828.1 - 2.3e-08 34.0 0.1 1.8e-05 24.7 0.0 3.0 1 1 1 2 2 2 2 Pentatricopeptide repeat domain PPR PF01535.20 RKO87828.1 - 0.0026 17.9 0.7 0.08 13.2 0.0 4.0 5 0 0 5 5 5 1 PPR repeat DUF2291 PF10054.9 RKO87828.1 - 0.2 11.3 1.1 6.1 6.5 0.0 3.1 3 0 0 3 3 3 0 Predicted periplasmic lipoprotein (DUF2291) Synaptobrevin PF00957.21 RKO87829.1 - 7.2e-12 44.9 2.7 1.2e-11 44.3 2.7 1.3 1 0 0 1 1 1 1 Synaptobrevin DUF2058 PF09831.9 RKO87829.1 - 0.31 11.2 5.7 0.16 12.1 3.4 1.7 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2058) EphA2_TM PF14575.6 RKO87830.1 - 0.13 13.1 0.0 0.48 11.3 0.0 1.9 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain SLBP_RNA_bind PF15247.6 RKO87832.1 - 0.15 12.2 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 Histone RNA hairpin-binding protein RNA-binding domain Gaa1 PF04114.14 RKO87832.1 - 0.42 9.6 8.4 0.5 9.3 8.4 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component DUF5349 PF17298.2 RKO87832.1 - 2 8.1 11.3 2.4 7.8 11.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5349) HNH_2 PF13391.6 RKO87833.1 - 3.4e-06 27.1 0.1 6.5e-06 26.2 0.1 1.5 1 0 0 1 1 1 1 HNH endonuclease DWNN PF08783.11 RKO87834.1 - 0.0043 17.3 0.0 0.0068 16.7 0.0 1.3 1 0 0 1 1 1 1 DWNN domain Herpes_U47 PF05467.11 RKO87834.1 - 2.1 6.4 5.2 2.6 6.1 5.2 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein U47 TFIIA PF03153.13 RKO87835.1 - 3.6 7.5 8.4 4.1 7.3 8.4 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit YidD PF01809.18 RKO87838.1 - 0.03 14.2 0.4 0.096 12.6 0.2 1.9 2 0 0 2 2 2 0 Putative membrane protein insertion efficiency factor Pyr_redox_2 PF07992.14 RKO87840.1 - 2.9e-12 46.4 0.0 1.9e-11 43.7 0.0 1.9 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 RKO87840.1 - 1.1e-06 28.5 0.2 8.4e-05 22.3 0.0 2.3 2 1 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 RKO87840.1 - 9.4e-05 22.4 0.0 0.012 15.6 0.0 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 RKO87840.1 - 0.00019 21.6 0.0 0.00051 20.2 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 RKO87840.1 - 0.0002 20.7 0.0 0.037 13.3 0.0 2.3 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 RKO87840.1 - 0.0011 18.0 0.0 0.0021 17.0 0.0 1.5 1 0 0 1 1 1 1 Tryptophan halogenase Thi4 PF01946.17 RKO87840.1 - 0.0046 16.2 0.0 0.0074 15.6 0.0 1.3 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.12 RKO87840.1 - 0.0051 15.9 0.1 0.0099 15.0 0.1 1.4 1 1 0 1 1 1 1 Lycopene cyclase protein FAD_binding_2 PF00890.24 RKO87840.1 - 0.0062 15.7 0.2 0.013 14.6 0.1 1.4 1 1 0 1 1 1 1 FAD binding domain GIDA PF01134.22 RKO87840.1 - 0.0075 15.4 0.0 0.023 13.8 0.0 1.7 2 0 0 2 2 2 1 Glucose inhibited division protein A HI0933_like PF03486.14 RKO87840.1 - 0.017 13.8 0.0 0.048 12.3 0.0 1.7 2 0 0 2 2 2 0 HI0933-like protein Sacchrp_dh_NADP PF03435.18 RKO87840.1 - 0.021 15.1 0.0 0.047 14.0 0.0 1.6 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Pyr_redox PF00070.27 RKO87840.1 - 0.024 15.2 0.0 0.37 11.4 0.0 2.6 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 RKO87840.1 - 0.032 13.5 0.1 0.06 12.6 0.1 1.4 2 0 0 2 2 2 0 FAD binding domain TrkA_N PF02254.18 RKO87840.1 - 0.052 13.8 0.0 0.12 12.6 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain F420_oxidored PF03807.17 RKO87840.1 - 0.14 12.8 0.0 0.46 11.1 0.0 1.9 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent SnoaL PF07366.12 RKO87841.1 - 0.002 17.9 0.0 0.0057 16.5 0.0 1.8 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase Zn_clus PF00172.18 RKO87842.1 - 5.3e-07 29.7 8.4 5.3e-07 29.7 8.4 2.3 2 0 0 2 2 2 1 Fungal Zn(2)-Cys(6) binuclear cluster domain cNMP_binding PF00027.29 RKO87843.1 - 0.00017 21.6 0.0 0.0028 17.7 0.0 2.2 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain SUIM_assoc PF16619.5 RKO87843.1 - 0.002 18.2 1.6 0.002 18.2 1.6 2.0 2 0 0 2 2 2 1 Unstructured region C-term to UIM in Ataxin3 zf-C2H2_8 PF15909.5 RKO87845.1 - 0.00024 21.3 1.8 0.12 12.7 0.1 3.0 2 0 0 2 2 2 2 C2H2-type zinc ribbon FOXP-CC PF16159.5 RKO87845.1 - 0.00046 20.8 34.7 0.027 15.1 0.1 5.9 3 2 3 6 6 6 3 FOXP coiled-coil domain zf_ZIC PF18366.1 RKO87845.1 - 0.0032 17.6 12.3 0.59 10.3 0.2 4.7 4 1 0 4 4 4 3 Zic proteins zinc finger domain zf-C2H2_3rep PF18868.1 RKO87845.1 - 0.21 12.3 8.4 1.1 10.0 0.1 3.2 2 1 1 3 3 3 0 Zinc finger C2H2-type, 3 repeats zf-C2H2_aberr PF17017.5 RKO87845.1 - 0.23 11.6 3.8 0.19 11.9 0.3 2.3 3 0 0 3 3 3 0 Aberrant zinc-finger EccE PF11203.8 RKO87845.1 - 0.42 11.0 10.3 1.1 9.6 10.2 1.8 1 1 0 1 1 1 0 Putative type VII ESX secretion system translocon, EccE zf-Di19 PF05605.12 RKO87845.1 - 0.44 10.9 9.2 29 5.1 0.1 4.5 4 0 0 4 4 4 0 Drought induced 19 protein (Di19), zinc-binding zf-DBF PF07535.12 RKO87845.1 - 0.8 9.9 2.9 26 5.0 0.3 4.3 5 0 0 5 5 5 0 DBF zinc finger zf-C2H2 PF00096.26 RKO87845.1 - 2.3 8.8 20.0 11 6.7 0.2 5.5 5 0 0 5 5 5 0 Zinc finger, C2H2 type TFIIA PF03153.13 RKO87845.1 - 9.9 6.0 24.3 14 5.5 24.3 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit MutS_I PF01624.20 RKO87846.1 - 9.8e-30 103.1 0.0 2e-29 102.1 0.0 1.5 1 0 0 1 1 1 1 MutS domain I MutS_III PF05192.18 RKO87846.1 - 1.7e-15 57.8 0.1 2.2e-14 54.1 0.0 2.4 2 0 0 2 2 2 1 MutS domain III MutS_II PF05188.17 RKO87846.1 - 3.3e-07 30.6 0.5 4.5e-06 27.0 0.1 2.4 2 0 0 2 2 2 1 MutS domain II GCIP PF13324.6 RKO87846.1 - 0.025 14.2 0.0 0.056 13.0 0.0 1.5 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting RSRP PF17069.5 RKO87849.1 - 2.6 7.5 11.8 5.6 6.4 11.8 1.5 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 NmrA PF05368.13 RKO87850.1 - 4.1e-10 39.6 0.0 5.8e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 RKO87850.1 - 3.3e-06 27.1 0.0 8.8e-06 25.7 0.0 1.8 1 1 0 1 1 1 1 NAD(P)H-binding Lipase_3 PF01764.25 RKO87851.1 - 4.1e-31 107.8 0.0 5.9e-31 107.2 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO87851.1 - 1.4e-08 34.5 1.2 1.3e-07 31.4 1.2 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Abhydrolase_6 PF12697.7 RKO87851.1 - 0.0025 18.4 1.5 0.0042 17.7 0.3 1.8 1 1 1 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 RKO87851.1 - 0.0045 16.3 0.1 0.0089 15.3 0.1 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Lipase_3 PF01764.25 RKO87852.1 - 2.6e-07 30.6 0.0 3.3e-07 30.3 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) PC-Esterase PF13839.6 RKO87855.1 - 4.5e-09 36.5 0.1 0.0015 18.3 0.0 2.2 2 0 0 2 2 2 2 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p ABC_tran PF00005.27 RKO87858.1 - 8.8e-43 146.1 0.0 7.5e-24 84.8 0.0 3.5 2 1 1 3 3 3 3 ABC transporter ABC2_membrane_3 PF12698.7 RKO87858.1 - 1.1e-25 90.5 11.3 1.8e-25 89.8 11.3 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein AAA_21 PF13304.6 RKO87858.1 - 8.2e-22 78.4 0.2 4.7e-07 29.9 0.0 4.2 3 1 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 RKO87858.1 - 1.1e-05 25.0 1.3 0.0076 16.0 0.2 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_15 PF13175.6 RKO87858.1 - 2.3e-05 24.3 0.0 0.91 9.2 0.0 3.2 3 0 0 3 3 3 2 AAA ATPase domain AAA_23 PF13476.6 RKO87858.1 - 3.6e-05 24.3 0.5 0.35 11.3 0.1 2.3 2 0 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 RKO87858.1 - 7.1e-05 22.8 0.2 0.019 14.8 0.0 2.5 2 0 0 2 2 2 1 RsgA GTPase SMC_N PF02463.19 RKO87858.1 - 0.00013 21.5 0.0 9 5.7 0.0 3.8 3 1 0 4 4 4 0 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 RKO87858.1 - 0.0021 18.5 0.4 0.97 9.8 0.0 2.8 2 1 0 2 2 2 1 AAA ATPase domain Mg_chelatase PF01078.21 RKO87858.1 - 0.0039 16.6 1.4 0.21 10.9 0.1 3.3 4 0 0 4 4 4 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 RKO87858.1 - 0.0084 15.9 0.0 22 4.7 0.0 3.7 4 0 0 4 4 4 0 IstB-like ATP binding protein Rad17 PF03215.15 RKO87858.1 - 0.009 15.9 0.1 5.2 7.0 0.0 2.2 2 0 0 2 2 2 2 Rad17 P-loop domain AAA_30 PF13604.6 RKO87858.1 - 0.011 15.4 0.2 5.5 6.7 0.0 2.6 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 RKO87858.1 - 0.013 15.6 0.2 0.29 11.2 0.0 2.5 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_24 PF13479.6 RKO87858.1 - 0.026 14.3 0.7 5.9 6.6 0.2 2.6 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 RKO87858.1 - 0.029 14.6 0.2 12 6.2 0.0 2.7 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 RKO87858.1 - 0.03 14.6 0.0 12 6.2 0.0 3.8 3 1 0 3 3 2 0 Putative exonuclease SbcCD, C subunit AAA_28 PF13521.6 RKO87858.1 - 0.036 14.3 1.3 2.9 8.1 0.0 2.8 3 0 0 3 3 2 0 AAA domain TsaE PF02367.17 RKO87858.1 - 0.092 12.7 0.3 13 5.8 0.0 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 RKO87858.1 - 0.12 12.9 0.6 1.7 9.1 0.0 2.8 3 0 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) AAA_27 PF13514.6 RKO87858.1 - 0.12 12.0 0.1 17 4.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 RKO87858.1 - 0.14 11.8 2.0 2.2 7.9 0.0 2.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_33 PF13671.6 RKO87858.1 - 0.14 12.3 0.1 10 6.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain MukB PF04310.12 RKO87858.1 - 0.17 11.7 0.5 3.5 7.4 0.1 2.3 2 0 0 2 2 2 0 MukB N-terminal NACHT PF05729.12 RKO87858.1 - 0.42 10.5 1.9 10 6.0 0.3 2.5 2 0 0 2 2 2 0 NACHT domain Mito_carr PF00153.27 RKO87860.1 - 1.2e-67 223.8 1.5 1.3e-22 79.5 0.1 3.2 3 0 0 3 3 3 3 Mitochondrial carrier protein EF-hand_1 PF00036.32 RKO87860.1 - 5.5e-09 34.9 0.4 8.8e-05 21.8 0.3 3.1 3 0 0 3 3 3 2 EF hand EF-hand_7 PF13499.6 RKO87860.1 - 1.6e-08 34.8 0.6 9.5e-08 32.4 0.5 2.0 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 RKO87860.1 - 4.7e-07 29.2 0.6 0.036 14.0 0.3 3.2 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 RKO87860.1 - 1.7e-05 24.5 0.5 0.00037 20.3 0.1 2.6 1 1 1 2 2 2 1 EF-hand domain pair EF-hand_5 PF13202.6 RKO87860.1 - 0.0006 19.2 3.4 0.01 15.3 0.1 2.7 3 0 0 3 3 3 1 EF hand EF-hand_4 PF12763.7 RKO87860.1 - 0.035 14.0 0.4 0.06 13.3 0.4 1.3 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand PT-VENN PF04829.13 RKO87860.1 - 2.9 8.0 3.9 3.8 7.7 0.3 2.5 2 0 0 2 2 2 0 Pre-toxin domain with VENN motif RmlD_sub_bind PF04321.17 RKO87862.1 - 7e-49 166.5 0.1 9.4e-49 166.0 0.1 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 RKO87862.1 - 2.6e-12 46.7 0.1 3.5e-12 46.3 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 RKO87862.1 - 0.0015 17.7 0.1 0.0064 15.7 0.1 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 RKO87862.1 - 0.0026 17.0 0.0 0.0065 15.7 0.0 1.7 1 1 0 1 1 1 1 Male sterility protein GDP_Man_Dehyd PF16363.5 RKO87862.1 - 0.003 17.0 0.1 0.0044 16.5 0.1 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Metallophos PF00149.28 RKO87863.1 - 2.8e-36 125.9 0.1 3.7e-36 125.6 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 RKO87863.1 - 0.039 14.2 0.0 0.057 13.6 0.0 1.3 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Glyco_hydro_65N PF03636.15 RKO87863.1 - 0.16 11.6 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, N-terminal domain PDT PF00800.18 RKO87866.1 - 9.2e-24 84.3 0.0 1.7e-23 83.4 0.0 1.4 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 RKO87866.1 - 2.3e-09 36.9 0.0 3.7e-09 36.2 0.0 1.4 1 0 0 1 1 1 1 ACT domain Pectinesterase PF01095.19 RKO87868.1 - 2.6e-19 69.1 0.1 4e-19 68.4 0.1 1.2 1 0 0 1 1 1 1 Pectinesterase zf-C2H2_4 PF13894.6 RKO87870.1 - 7.1e-11 42.0 42.5 0.013 16.3 0.3 9.5 9 1 0 9 9 9 5 C2H2-type zinc finger zf-C2H2 PF00096.26 RKO87870.1 - 3.9e-07 30.2 54.5 0.0019 18.5 0.0 8.7 10 0 0 10 10 10 5 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 RKO87870.1 - 2.1e-05 24.6 33.5 0.027 14.7 0.0 8.3 9 0 0 9 9 9 3 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 RKO87870.1 - 0.0058 17.0 25.4 2.6 8.5 0.0 7.9 9 0 0 9 9 9 1 Zinc-finger of C2H2 type zf-C2H2_6 PF13912.6 RKO87870.1 - 0.0093 15.9 0.2 0.0093 15.9 0.2 6.4 8 0 0 8 8 8 2 C2H2-type zinc finger Zn_ribbon_recom PF13408.6 RKO87870.1 - 0.35 11.4 0.1 0.35 11.4 0.1 4.9 4 3 1 5 5 5 0 Recombinase zinc beta ribbon domain zf-H2C2_2 PF13465.6 RKO87870.1 - 2.3 8.8 0.0 2.3 8.8 0.0 7.5 8 0 0 8 8 8 0 Zinc-finger double domain zinc_ribbon_9 PF14369.6 RKO87871.1 - 0.00024 21.3 33.7 0.025 14.9 1.2 3.7 3 1 0 3 3 3 3 zinc-ribbon zinc_ribbon_12 PF11331.8 RKO87871.1 - 0.00042 20.1 3.9 0.13 12.1 0.0 3.3 3 1 1 4 4 4 2 Probable zinc-ribbon domain zf-C2H2_4 PF13894.6 RKO87871.1 - 0.0016 19.1 26.8 0.44 11.5 1.0 5.0 5 0 0 5 5 5 3 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 RKO87871.1 - 0.0024 18.1 28.0 0.03 14.6 1.2 4.8 5 0 0 5 5 5 3 Zinc-finger double-stranded RNA-binding zf-C2H2 PF00096.26 RKO87871.1 - 0.0077 16.6 2.5 0.0077 16.6 2.5 5.4 5 1 0 5 5 5 2 Zinc finger, C2H2 type FYVE PF01363.21 RKO87871.1 - 0.23 11.6 20.9 0.97 9.6 8.9 2.3 2 1 0 2 2 2 0 FYVE zinc finger zf-met PF12874.7 RKO87871.1 - 0.39 11.2 18.3 1.5 9.3 0.4 4.5 5 0 0 5 5 5 0 Zinc-finger of C2H2 type Quaking_NLS PF16551.5 RKO87871.1 - 0.62 9.8 13.8 1.4 8.7 0.4 3.8 4 0 0 4 4 4 0 Putative nuclear localisation signal of quaking Ribosomal_S27e PF01667.17 RKO87871.1 - 2.5 7.9 0.0 2.5 7.9 0.0 3.1 5 0 0 5 5 5 0 Ribosomal protein S27 zf-LYAR PF08790.11 RKO87871.1 - 5.8 6.9 28.3 2.7 8.0 1.8 5.1 5 0 0 5 5 5 0 LYAR-type C2HC zinc finger zf_C2H2_ZHX PF18387.1 RKO87871.1 - 7.5 6.3 23.0 1.4 8.6 1.9 4.1 2 2 2 4 4 4 0 Zinc-fingers and homeoboxes C2H2 finger domain TSLP PF15216.6 RKO87872.1 - 0.12 12.7 0.0 1.7 8.9 0.1 2.1 2 0 0 2 2 2 0 Thymic stromal lymphopoietin VWA PF00092.28 RKO87873.1 - 8.8e-16 58.6 0.0 1.3e-15 58.1 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 RKO87873.1 - 3.8e-12 46.8 0.0 7.7e-12 45.8 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 RKO87873.1 - 6.7e-10 39.1 0.0 1.5e-09 38.0 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 RKO87873.1 - 2.1e-07 30.6 0.0 3.9e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein zf-RING_2 PF13639.6 RKO87873.1 - 0.00042 20.6 3.9 0.00096 19.4 3.9 1.6 1 0 0 1 1 1 1 Ring finger domain DUF4578 PF15147.6 RKO87873.1 - 0.016 16.1 0.0 0.037 14.9 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4578) zf-RING_UBOX PF13445.6 RKO87873.1 - 0.042 13.9 3.0 0.13 12.3 3.0 1.9 1 1 0 1 1 1 0 RING-type zinc-finger DUF2201 PF09967.9 RKO87873.1 - 0.065 13.4 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 VWA-like domain (DUF2201) zf-RING_5 PF14634.6 RKO87873.1 - 0.068 13.1 2.5 0.15 12.0 2.5 1.6 1 0 0 1 1 1 0 zinc-RING finger domain zf-C3HC4_2 PF13923.6 RKO87873.1 - 0.99 9.3 4.4 2.9 7.8 4.4 1.9 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Myb_DNA-bind_6 PF13921.6 RKO87874.1 - 1.5e-11 44.3 0.1 1.8e-05 24.9 0.3 2.3 1 1 1 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 RKO87874.1 - 5.3e-11 42.5 1.1 1e-05 25.6 0.3 2.4 2 0 0 2 2 2 2 Myb-like DNA-binding domain WD40 PF00400.32 RKO87877.1 - 3.8e-33 113.0 11.3 5.7e-06 27.0 0.1 7.2 7 0 0 7 7 7 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO87877.1 - 2.8e-15 56.4 0.0 6.1e-05 23.3 0.0 5.6 3 1 3 6 6 6 4 Anaphase-promoting complex subunit 4 WD40 domain PRP4 PF08799.11 RKO87877.1 - 2.1e-13 49.6 3.7 3.6e-13 48.8 3.7 1.4 1 0 0 1 1 1 1 pre-mRNA processing factor 4 (PRP4) like WD40_like PF17005.5 RKO87877.1 - 0.031 13.6 0.0 4.2 6.6 0.0 2.2 2 0 0 2 2 2 0 WD40-like domain CRM1_C PF08767.11 RKO87879.1 - 5.6e-129 429.9 7.8 7e-128 426.3 3.6 2.3 2 0 0 2 2 2 2 CRM1 C terminal CRM1_repeat_3 PF18787.1 RKO87879.1 - 6.3e-29 99.9 3.3 8.3e-29 99.5 1.2 2.4 2 0 0 2 2 2 1 CRM1 / Exportin repeat 3 CRM1_repeat_2 PF18784.1 RKO87879.1 - 2.6e-24 84.6 3.6 8.6e-24 83.0 3.6 2.0 1 0 0 1 1 1 1 CRM1 / Exportin repeat 2 MMS19_C PF12460.8 RKO87879.1 - 0.0047 16.1 4.9 0.53 9.3 0.2 3.4 1 1 1 3 3 3 2 RNAPII transcription regulator C-terminal FliH PF02108.16 RKO87879.1 - 0.021 14.9 0.7 0.079 13.0 0.1 2.3 2 0 0 2 2 2 0 Flagellar assembly protein FliH BID PF06393.11 RKO87879.1 - 0.035 13.6 0.1 0.12 11.9 0.1 1.9 1 0 0 1 1 1 0 BH3 interacting domain (BID) GTP_EFTU_D4 PF14578.6 RKO87880.1 - 0.027 14.4 0.0 0.044 13.7 0.0 1.3 1 0 0 1 1 1 0 Elongation factor Tu domain 4 PRD PF00874.20 RKO87880.1 - 0.055 13.8 0.0 0.07 13.4 0.0 1.2 1 0 0 1 1 1 0 PRD domain Homeobox_KN PF05920.11 RKO87881.1 - 1.2e-12 47.5 0.6 2.4e-12 46.5 0.6 1.5 1 0 0 1 1 1 1 Homeobox KN domain Homeodomain PF00046.29 RKO87881.1 - 0.00019 21.2 1.4 0.044 13.6 0.0 3.0 2 1 0 2 2 2 2 Homeodomain NinD PF17466.2 RKO87881.1 - 0.0026 17.8 0.2 0.0049 16.9 0.2 1.4 1 0 0 1 1 1 1 Family of unknown function Homez PF11569.8 RKO87881.1 - 0.15 11.6 0.5 0.56 9.7 0.0 2.2 3 0 0 3 3 3 0 Homeodomain leucine-zipper encoding, Homez MutS_II PF05188.17 RKO87882.1 - 5.3e-07 30.0 0.0 6.7e-07 29.7 0.0 1.1 1 0 0 1 1 1 1 MutS domain II TPR_2 PF07719.17 RKO87883.1 - 1.4e-16 59.2 1.4 0.025 14.7 0.0 8.8 10 0 0 10 10 9 3 Tetratricopeptide repeat TPR_14 PF13428.6 RKO87883.1 - 1.3e-12 47.4 18.7 0.19 12.6 0.1 8.2 4 2 5 9 9 9 5 Tetratricopeptide repeat TPR_9 PF13371.6 RKO87883.1 - 1.1e-11 44.7 11.3 0.0041 17.2 0.1 4.2 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 RKO87883.1 - 3.8e-11 43.1 21.1 2.3e-06 27.8 0.6 6.8 4 2 4 8 8 8 6 Tetratricopeptide repeat TPR_8 PF13181.6 RKO87883.1 - 2.2e-10 39.9 0.7 0.0078 16.3 0.0 6.2 7 0 0 7 7 6 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO87883.1 - 3.5e-10 40.3 17.5 0.011 16.4 0.6 6.6 5 1 2 7 7 7 3 Tetratricopeptide repeat TPR_1 PF00515.28 RKO87883.1 - 4.5e-10 38.9 3.6 0.0058 16.4 0.0 7.0 9 0 0 9 9 9 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO87883.1 - 2.2e-07 31.3 13.3 0.13 12.8 0.0 6.3 6 1 0 6 6 6 3 Tetratricopeptide repeat TPR_17 PF13431.6 RKO87883.1 - 6.3e-06 26.2 5.1 6.3 7.4 0.1 6.8 7 0 0 7 7 7 2 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO87883.1 - 0.033 14.4 4.3 0.13 12.5 0.2 3.6 5 0 0 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 RKO87883.1 - 0.042 13.5 6.2 1.4 8.7 1.2 3.8 3 1 1 4 4 4 0 TPR repeat DUF3808 PF10300.9 RKO87883.1 - 0.11 11.2 0.0 0.25 10.0 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3808) FOP_dimer PF09398.10 RKO87886.1 - 0.12 12.6 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 FOP N terminal dimerisation domain SNF2_N PF00176.23 RKO87888.1 - 3.6e-45 154.2 0.3 6.3e-45 153.4 0.3 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain zf-RING_5 PF14634.6 RKO87888.1 - 3.2e-08 33.4 4.2 7.1e-08 32.3 4.2 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_2 PF13639.6 RKO87888.1 - 1.9e-06 28.1 3.7 1.9e-06 28.1 3.7 2.2 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 RKO87888.1 - 6.2e-06 26.0 4.0 1.8e-05 24.5 4.0 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 RKO87888.1 - 6.7e-06 26.0 4.8 7.6e-06 25.8 3.1 2.0 2 0 0 2 2 2 1 RING-type zinc-finger ResIII PF04851.15 RKO87888.1 - 1.3e-05 25.3 0.0 3.5e-05 23.9 0.0 1.8 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit zf-C3HC4_2 PF13923.6 RKO87888.1 - 3.5e-05 23.6 4.3 0.00011 21.9 4.3 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 RKO87888.1 - 0.0015 18.7 3.9 0.0041 17.3 3.9 1.8 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 RKO87888.1 - 0.0022 17.8 4.5 0.0022 17.8 4.5 2.2 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 RKO87888.1 - 0.0063 16.8 2.6 0.015 15.5 2.6 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 RKO87888.1 - 0.011 15.7 1.1 0.031 14.3 1.1 1.7 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_4 PF14570.6 RKO87888.1 - 0.099 12.5 7.2 0.048 13.5 3.1 2.4 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-RING_10 PF16685.5 RKO87888.1 - 0.75 10.0 6.1 2.2 8.5 1.7 2.6 2 0 0 2 2 2 0 zinc RING finger of MSL2 Pkinase PF00069.25 RKO87889.1 - 2.3e-44 151.8 0.0 2.5e-44 151.6 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO87889.1 - 3.5e-26 92.0 0.0 3.9e-26 91.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 RKO87889.1 - 1.9e-07 30.4 0.0 2.5e-07 30.0 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 RKO87889.1 - 0.00023 20.6 0.2 0.00038 19.9 0.2 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 RKO87889.1 - 0.013 15.4 0.3 0.067 13.1 0.1 1.8 1 1 1 2 2 2 0 Phosphotransferase enzyme family TAT_signal PF10518.9 RKO87891.1 - 0.05 13.5 0.5 0.092 12.6 0.5 1.5 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Drf_FH1 PF06346.12 RKO87893.1 - 0.022 14.5 14.7 0.029 14.1 14.7 1.2 1 0 0 1 1 1 0 Formin Homology Region 1 DEC-1_N PF04625.13 RKO87893.1 - 0.064 12.3 9.8 0.066 12.2 9.8 1.2 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region Cuticle_3 PF11018.8 RKO87893.1 - 0.81 9.9 16.2 1.1 9.5 16.2 1.1 1 0 0 1 1 1 0 Pupal cuticle protein C1 MFS_1 PF07690.16 RKO87894.1 - 3.4e-24 85.4 41.5 4.3e-24 85.1 41.5 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO87894.1 - 1e-08 34.5 1.5 1e-08 34.5 1.5 2.6 2 1 0 3 3 3 1 Sugar (and other) transporter PHD_2 PF13831.6 RKO87895.1 - 0.029 13.9 0.8 0.059 12.9 0.8 1.5 1 0 0 1 1 1 0 PHD-finger PET117 PF15786.5 RKO87897.1 - 0.012 15.8 0.4 18 5.7 0.0 3.6 4 0 0 4 4 4 0 PET assembly of cytochrome c oxidase, mitochondrial DUF5100 PF17029.5 RKO87899.1 - 0.086 12.7 4.0 0.36 10.7 0.1 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF5100) Androgen_recep PF02166.16 RKO87900.1 - 0.0019 17.1 0.7 0.0026 16.7 0.7 1.1 1 0 0 1 1 1 1 Androgen receptor DUF3626 PF12294.8 RKO87901.1 - 0.0008 18.5 0.0 0.0013 17.9 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF3626) FliW PF02623.15 RKO87901.1 - 0.051 13.5 0.0 0.073 13.0 0.0 1.3 1 0 0 1 1 1 0 FliW protein Ank_2 PF12796.7 RKO87902.1 - 1.6e-30 105.5 3.2 2.4e-10 40.8 0.1 3.4 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO87902.1 - 1.6e-23 82.8 4.9 1.5e-06 28.6 0.2 6.8 3 2 3 7 7 7 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO87902.1 - 9.9e-22 74.7 7.5 0.021 15.3 0.0 8.1 8 0 0 8 8 8 6 Ankyrin repeat Ank_5 PF13857.6 RKO87902.1 - 2e-16 59.8 10.5 0.02 15.2 0.1 7.6 3 2 5 8 8 8 4 Ankyrin repeats (many copies) Ank PF00023.30 RKO87902.1 - 4.5e-12 45.8 9.8 0.8 10.3 0.4 7.9 6 2 0 6 6 6 4 Ankyrin repeat TetR_C_7 PF14246.6 RKO87902.1 - 0.075 13.1 1.0 0.23 11.5 0.3 2.2 4 0 0 4 4 4 0 AefR-like transcriptional repressor, C-terminal domain WD40 PF00400.32 RKO87903.1 - 3.2e-06 27.7 0.2 0.0016 19.3 0.1 2.7 2 0 0 2 2 2 2 WD domain, G-beta repeat Sina PF03145.16 RKO87903.1 - 5.8e-06 26.4 0.1 9.6e-06 25.7 0.1 1.3 1 0 0 1 1 1 1 Seven in absentia protein family zf-TRAF PF02176.18 RKO87903.1 - 0.00092 19.9 1.7 0.46 11.2 0.7 2.3 1 1 1 2 2 2 2 TRAF-type zinc finger zf-TRAF_2 PF15965.5 RKO87903.1 - 0.025 15.0 0.6 0.078 13.5 0.6 1.7 1 1 0 1 1 1 0 TRAF-like zinc-finger Ribosomal_L22e PF01776.17 RKO87904.1 - 5.8e-45 152.1 0.0 8.1e-45 151.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal L22e protein family PEX11 PF05648.14 RKO87905.1 - 1.2e-31 110.0 0.0 1.3e-31 109.8 0.0 1.0 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) CH PF00307.31 RKO87906.1 - 1.4e-09 38.1 0.0 1.8e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 Calponin homology (CH) domain Surface_antigen PF11054.8 RKO87906.1 - 0.064 12.9 0.1 0.078 12.6 0.1 1.1 1 0 0 1 1 1 0 Sporozoite TA4 surface antigen DUF3669 PF12417.8 RKO87906.1 - 0.2 11.9 0.1 0.33 11.2 0.1 1.4 1 1 0 1 1 1 0 Zinc finger protein LRR_8 PF13855.6 RKO87908.1 - 1.9e-09 37.1 5.0 0.00073 19.3 0.2 3.4 3 0 0 3 3 3 2 Leucine rich repeat LRR_9 PF14580.6 RKO87908.1 - 7.3e-09 35.4 0.1 6.9e-06 25.7 0.1 2.3 2 0 0 2 2 2 2 Leucine-rich repeat LRR_4 PF12799.7 RKO87908.1 - 2.9e-07 30.7 6.1 0.002 18.5 0.2 3.0 2 1 1 3 3 3 2 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 RKO87908.1 - 0.00085 19.2 5.6 0.82 9.9 0.0 4.4 4 0 0 4 4 4 2 Leucine Rich repeat LRR_1 PF00560.33 RKO87908.1 - 0.58 10.9 7.8 49 5.1 0.0 4.5 4 1 0 4 4 4 0 Leucine Rich Repeat DUF2985 PF11204.8 RKO87911.1 - 1.4e-11 44.4 0.5 1.4e-11 44.4 0.5 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2985) LapA_dom PF06305.11 RKO87911.1 - 0.69 9.8 2.2 4.1 7.3 0.1 2.3 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain Helicase_C PF00271.31 RKO87912.1 - 8.1e-14 51.9 0.0 1.3e-13 51.3 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain FANCM-MHF_bd PF16783.5 RKO87912.1 - 0.0092 16.0 0.0 0.021 14.9 0.0 1.6 1 1 0 1 1 1 1 FANCM to MHF binding domain CHD5 PF04420.14 RKO87913.1 - 3.4e-29 101.8 0.0 4e-29 101.5 0.0 1.0 1 0 0 1 1 1 1 CHD5-like protein DUF3618 PF12277.8 RKO87913.1 - 0.11 12.8 0.5 0.16 12.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3618) RNase_T PF00929.24 RKO87914.1 - 4.2e-22 79.4 0.0 5.4e-22 79.1 0.0 1.1 1 0 0 1 1 1 1 Exonuclease Oxidored_molyb PF00174.19 RKO87915.1 - 6.2e-39 133.4 0.0 5.7e-26 91.2 0.0 2.2 1 1 0 2 2 2 2 Oxidoreductase molybdopterin binding domain Mo-co_dimer PF03404.16 RKO87915.1 - 1.9e-35 121.9 0.5 3.2e-35 121.1 0.5 1.4 1 0 0 1 1 1 1 Mo-co oxidoreductase dimerisation domain Cyt-b5 PF00173.28 RKO87915.1 - 3e-10 40.1 0.0 5e-10 39.4 0.0 1.3 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain DEC-1_N PF04625.13 RKO87916.1 - 0.002 17.2 0.8 0.0029 16.7 0.8 1.2 1 0 0 1 1 1 1 DEC-1 protein, N-terminal region E1_dh PF00676.20 RKO87917.1 - 6.6e-08 31.9 0.0 9.4e-08 31.3 0.0 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component COG6 PF06419.11 RKO87918.1 - 5.6e-204 678.9 0.3 6.4e-204 678.8 0.3 1.0 1 0 0 1 1 1 1 Conserved oligomeric complex COG6 GldM_N PF12081.8 RKO87918.1 - 0.025 14.6 0.5 0.056 13.5 0.5 1.5 1 0 0 1 1 1 0 GldM N-terminal domain CCDC53 PF10152.9 RKO87918.1 - 0.087 13.2 0.2 0.15 12.4 0.2 1.4 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex DUF4795 PF16043.5 RKO87918.1 - 0.28 10.7 3.8 2 7.9 0.5 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4795) WD40 PF00400.32 RKO87919.1 - 1.2e-05 25.9 0.8 0.00027 21.7 0.0 3.5 3 0 0 3 3 3 1 WD domain, G-beta repeat PQQ_3 PF13570.6 RKO87919.1 - 0.0034 17.8 0.3 4 8.0 0.0 3.1 2 0 0 2 2 2 2 PQQ-like domain ERAP1_C PF11838.8 RKO87920.1 - 3.5e-40 138.5 0.3 5.2e-40 137.9 0.3 1.3 1 0 0 1 1 1 1 ERAP1-like C-terminal domain Sporozoite_P67 PF05642.11 RKO87921.1 - 1 7.3 5.1 1.4 6.9 5.1 1.2 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Ank_2 PF12796.7 RKO87923.1 - 1.3e-17 64.1 0.1 6e-15 55.6 0.2 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO87923.1 - 2.4e-16 59.5 4.5 5.6e-12 45.7 0.1 3.6 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank PF00023.30 RKO87923.1 - 3.4e-14 52.6 6.6 2.3e-07 31.0 0.1 3.7 4 1 1 5 5 5 2 Ankyrin repeat Ank_3 PF13606.6 RKO87923.1 - 1.2e-13 49.9 0.1 3.9e-06 26.8 0.0 4.0 4 0 0 4 4 4 2 Ankyrin repeat Ank_4 PF13637.6 RKO87923.1 - 2.6e-13 50.2 0.1 7.8e-11 42.3 0.0 3.2 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Sporozoite_P67 PF05642.11 RKO87924.1 - 0.00012 20.3 0.0 0.00026 19.2 0.0 1.4 1 1 0 1 1 1 1 Sporozoite P67 surface antigen AD PF09793.9 RKO87924.1 - 0.15 12.2 0.0 0.15 12.2 0.0 2.5 2 0 0 2 2 2 0 Anticodon-binding domain Spt20 PF12090.8 RKO87924.1 - 0.78 9.3 16.7 1.3 8.6 16.7 1.3 1 0 0 1 1 1 0 Spt20 family Ndc1_Nup PF09531.10 RKO87924.1 - 1.7 7.3 4.2 2.2 6.9 4.2 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Med3 PF11593.8 RKO87924.1 - 2 7.5 14.7 2.8 7.0 14.7 1.2 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DUF3292 PF11696.8 RKO87924.1 - 7.3 4.8 6.5 12 4.1 6.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) TFIIA PF03153.13 RKO87924.1 - 8.4 6.3 20.6 2.1 8.2 14.3 2.0 2 0 0 2 2 2 0 Transcription factor IIA, alpha/beta subunit TAF PF02969.17 RKO87925.1 - 1.3e-24 86.1 0.3 1.8e-24 85.7 0.3 1.2 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) Histone PF00125.24 RKO87925.1 - 3.7e-05 24.1 0.1 4.4e-05 23.8 0.1 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 RKO87925.1 - 0.011 15.8 0.0 0.013 15.5 0.0 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit GSIII_N PF12437.8 RKO87926.1 - 0.036 13.7 0.0 0.054 13.2 0.0 1.3 1 0 0 1 1 1 0 Glutamine synthetase type III N terminal GSIII_N PF12437.8 RKO87927.1 - 1e-48 165.0 0.4 1.8e-48 164.3 0.4 1.4 1 0 0 1 1 1 1 Glutamine synthetase type III N terminal Gln-synt_C-ter PF18318.1 RKO87927.1 - 2.6e-37 127.3 0.0 4.5e-37 126.5 0.0 1.4 1 0 0 1 1 1 1 Glutamine synthetase C-terminal domain Gln-synt_C PF00120.24 RKO87927.1 - 1.8e-19 70.0 0.0 4.7e-19 68.6 0.0 1.6 2 0 0 2 2 2 1 Glutamine synthetase, catalytic domain PspA_IM30 PF04012.12 RKO87928.1 - 0.032 13.8 2.0 0.043 13.4 2.0 1.2 1 0 0 1 1 1 0 PspA/IM30 family F-box-like PF12937.7 RKO87929.1 - 3.2e-08 33.3 2.3 9.3e-08 31.9 2.3 1.8 1 0 0 1 1 1 1 F-box-like LRR_6 PF13516.6 RKO87929.1 - 6.3e-05 22.7 0.1 0.54 10.5 0.1 3.3 3 0 0 3 3 3 2 Leucine Rich repeat HrpB7 PF09486.10 RKO87930.1 - 0.00094 19.6 5.0 0.0018 18.7 5.0 1.5 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB7) MscS_porin PF12795.7 RKO87930.1 - 0.0069 16.0 15.2 0.012 15.2 15.2 1.3 1 0 0 1 1 1 1 Mechanosensitive ion channel porin domain AAA_13 PF13166.6 RKO87930.1 - 0.061 12.0 5.5 0.084 11.5 5.5 1.1 1 0 0 1 1 1 0 AAA domain HMMR_N PF15905.5 RKO87930.1 - 0.22 11.0 6.8 0.32 10.4 6.8 1.1 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Spc7 PF08317.11 RKO87930.1 - 0.24 10.2 7.8 0.36 9.6 7.8 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Tropomyosin_1 PF12718.7 RKO87930.1 - 0.35 11.0 5.3 0.52 10.5 4.8 1.6 1 1 0 1 1 1 0 Tropomyosin like Reeler PF02014.16 RKO87935.1 - 9.5e-12 45.8 0.0 1.8e-11 44.9 0.0 1.4 1 0 0 1 1 1 1 Reeler domain HSP20 PF00011.21 RKO87937.1 - 3.8e-20 71.9 0.3 4.1e-20 71.8 0.3 1.0 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 RKO87937.1 - 2.1e-11 43.2 0.1 3.4e-11 42.5 0.1 1.3 1 1 0 1 1 1 1 HSP20-like domain found in ArsA GvpH PF05455.11 RKO87937.1 - 0.018 15.1 0.2 0.13 12.3 0.2 2.0 1 1 0 1 1 1 0 GvpH FKBP26_C PF18046.1 RKO87937.1 - 0.023 14.8 0.3 0.14 12.3 0.0 2.0 2 0 0 2 2 2 0 FKBP26_C-terminal RCC1 PF00415.18 RKO87941.1 - 0.014 16.0 1.3 0.052 14.2 0.0 2.4 3 0 0 3 3 3 0 Regulator of chromosome condensation (RCC1) repeat GGA_N-GAT PF18308.1 RKO87942.1 - 3.7 7.3 9.1 84 2.9 0.1 4.6 3 1 1 4 4 4 0 GGA N-GAT domain SH3_9 PF14604.6 RKO87943.1 - 0.00018 21.3 0.0 0.00034 20.4 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO87943.1 - 0.0041 16.7 0.0 0.0091 15.6 0.0 1.6 1 0 0 1 1 1 1 SH3 domain zinc-ribbons_6 PF07191.12 RKO87946.1 - 3.3 7.8 6.2 13 5.9 2.9 2.6 1 1 2 3 3 3 0 zinc-ribbons Pkinase PF00069.25 RKO87947.1 - 8.1e-48 163.1 0.0 9.8e-48 162.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO87947.1 - 9.3e-13 48.1 0.0 1.4e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO87947.1 - 3.6e-07 30.3 0.1 7.6e-07 29.3 0.1 1.6 1 1 0 1 1 1 1 Phosphotransferase enzyme family ABC1 PF03109.16 RKO87947.1 - 0.057 13.6 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 ABC1 family Choline_kinase PF01633.20 RKO87947.1 - 0.059 13.0 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase Pkinase_fungal PF17667.1 RKO87947.1 - 0.084 11.6 0.0 0.12 11.1 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Kinase-like PF14531.6 RKO87947.1 - 0.12 11.6 0.0 0.21 10.8 0.0 1.3 1 0 0 1 1 1 0 Kinase-like Kdo PF06293.14 RKO87947.1 - 0.14 11.5 0.1 0.22 10.8 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family MULE PF10551.9 RKO87950.1 - 3.5e-07 30.5 0.7 2.9e-05 24.4 0.1 2.4 2 0 0 2 2 2 2 MULE transposase domain Myb_DNA-bind_4 PF13837.6 RKO87951.1 - 0.058 13.8 0.2 7.9 6.9 0.1 2.7 2 0 0 2 2 2 0 Myb/SANT-like DNA-binding domain DEAD PF00270.29 RKO87956.1 - 2.7e-38 131.5 0.0 7.7e-38 130.0 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO87956.1 - 3.7e-22 78.8 0.0 1.2e-21 77.1 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO87956.1 - 1e-06 28.9 0.0 1.8e-05 24.8 0.0 2.4 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_30 PF13604.6 RKO87956.1 - 0.00044 20.0 0.0 0.0011 18.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain SecA_DEAD PF07517.14 RKO87956.1 - 0.057 12.7 0.0 0.11 11.7 0.0 1.5 1 1 0 1 1 1 0 SecA DEAD-like domain AAA_19 PF13245.6 RKO87956.1 - 0.098 13.0 0.0 0.16 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain Ank_2 PF12796.7 RKO87959.1 - 0.0016 19.0 0.0 0.0021 18.6 0.0 1.3 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO87959.1 - 0.044 14.4 0.3 3 8.5 0.0 2.3 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO87959.1 - 0.14 12.6 0.0 3 8.3 0.0 2.5 2 1 1 3 3 3 0 Ankyrin repeats (many copies) FA_desaturase PF00487.24 RKO87963.1 - 1.9e-39 136.1 19.7 1.9e-39 136.1 19.7 1.4 1 1 1 2 2 2 1 Fatty acid desaturase Cyt-b5 PF00173.28 RKO87963.1 - 1.1e-11 44.7 0.1 2.1e-11 43.8 0.1 1.5 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain AMP-binding PF00501.28 RKO87964.1 - 2.3e-16 59.4 0.0 2.5e-16 59.3 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme NUDIX PF00293.28 RKO87965.1 - 1.3e-15 57.6 1.0 1.7e-15 57.2 1.0 1.1 1 0 0 1 1 1 1 NUDIX domain APG5 PF04106.12 RKO87966.1 - 6.6e-60 202.5 0.0 9.1e-60 202.1 0.0 1.2 1 0 0 1 1 1 1 Autophagy protein Apg5 OGG_N PF07934.12 RKO87967.1 - 2.5e-32 111.5 0.0 4.1e-32 110.8 0.0 1.3 1 0 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain HhH-GPD PF00730.25 RKO87967.1 - 9.8e-18 64.6 0.0 1.6e-17 63.9 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 RKO87967.1 - 2.8e-05 23.8 0.1 0.00013 21.6 0.1 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_8 PF14716.6 RKO87967.1 - 0.071 13.5 0.0 0.19 12.1 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix domain Rad9 PF04139.13 RKO87968.1 - 3e-43 148.1 0.0 3.7e-43 147.8 0.0 1.1 1 0 0 1 1 1 1 Rad9 DUF5102 PF17104.5 RKO87968.1 - 0.0021 18.1 1.3 0.0062 16.6 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF5102) OPT PF03169.15 RKO87969.1 - 1.8e-140 469.5 44.2 2.2e-140 469.2 44.2 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein SLATT_1 PF18181.1 RKO87969.1 - 0.39 10.7 4.9 1.7 8.6 0.1 2.9 3 0 0 3 3 3 0 SMODS and SLOG-associating 2TM effector domain 1 E1-E2_ATPase PF00122.20 RKO87969.1 - 0.89 9.0 7.3 0.45 10.0 0.2 2.5 2 0 0 2 2 2 0 E1-E2 ATPase Auts2 PF15336.6 RKO87971.1 - 0.15 12.2 3.1 4.8 7.3 1.7 2.2 2 0 0 2 2 2 0 Autism susceptibility gene 2 protein DNA_Packaging PF11053.8 RKO87975.1 - 0.082 12.8 0.3 0.21 11.4 0.2 1.6 1 1 0 1 1 1 0 Terminase DNA packaging enzyme WD40_alt PF14077.6 RKO87975.1 - 2 8.4 6.6 81 3.2 0.1 3.9 1 1 3 4 4 4 0 Alternative WD40 repeat motif Opacity PF02462.15 RKO87979.1 - 0.21 11.7 0.0 0.28 11.3 0.0 1.3 1 0 0 1 1 1 0 Opacity family porin protein Mito_carr PF00153.27 RKO87984.1 - 7.9e-61 202.0 5.7 1.1e-22 79.7 0.0 3.4 3 1 0 3 3 3 3 Mitochondrial carrier protein DUF4235 PF14019.6 RKO87984.1 - 1.6 8.9 0.0 1.6 8.9 0.0 3.2 4 0 0 4 4 4 0 Protein of unknown function (DUF4235) WD40 PF00400.32 RKO87985.1 - 1.8e-16 60.2 8.1 0.0056 17.5 0.1 5.9 6 0 0 6 6 6 4 WD domain, G-beta repeat WD40_like PF17005.5 RKO87985.1 - 0.0002 20.8 0.0 0.0018 17.6 0.0 2.1 1 1 1 2 2 2 1 WD40-like domain THAP PF05485.12 RKO87985.1 - 0.054 14.4 0.1 0.61 11.0 0.1 2.3 2 0 0 2 2 2 0 THAP domain Frtz PF11768.8 RKO87985.1 - 0.066 11.5 0.2 0.23 9.7 0.0 1.8 2 0 0 2 2 2 0 WD repeat-containing and planar cell polarity effector protein Fritz Asp PF00026.23 RKO87986.1 - 5.6e-18 65.4 0.0 6.2e-18 65.3 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 RKO87986.1 - 0.0028 17.5 0.0 1.2 9.0 0.0 2.0 2 0 0 2 2 2 2 Xylanase inhibitor C-terminal Ribophorin_I PF04597.14 RKO87987.1 - 1.1e-109 367.7 2.5 1.5e-109 367.2 2.5 1.2 1 0 0 1 1 1 1 Ribophorin I Cep57_MT_bd PF06657.13 RKO87987.1 - 0.025 15.0 0.0 0.051 14.0 0.0 1.5 1 0 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 Sec63 PF02889.16 RKO87988.1 - 1.8e-92 309.2 0.0 2.6e-92 308.6 0.0 1.3 1 0 0 1 1 1 1 Sec63 Brl domain DEAD PF00270.29 RKO87988.1 - 1.5e-47 161.6 0.0 3.1e-26 92.2 0.2 2.7 2 0 0 2 2 2 2 DEAD/DEAH box helicase Helicase_PWI PF18149.1 RKO87988.1 - 8.5e-35 119.3 0.1 5.7e-34 116.6 0.0 2.4 2 0 0 2 2 2 1 N-terminal helicase PWI domain ResIII PF04851.15 RKO87988.1 - 6.3e-26 91.4 0.0 9.6e-14 51.7 0.0 3.1 3 0 0 3 3 3 2 Type III restriction enzyme, res subunit Helicase_C PF00271.31 RKO87988.1 - 4.4e-11 43.1 0.0 5.2e-09 36.4 0.0 3.4 2 1 0 2 2 2 1 Helicase conserved C-terminal domain AAA_22 PF13401.6 RKO87988.1 - 1.2e-08 35.3 0.0 0.0044 17.3 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_30 PF13604.6 RKO87988.1 - 2.1e-06 27.6 0.2 0.052 13.3 0.0 3.0 3 0 0 3 3 3 2 AAA domain AAA PF00004.29 RKO87988.1 - 0.0041 17.5 1.4 0.31 11.5 1.0 3.6 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) PhoH PF02562.16 RKO87988.1 - 0.03 13.8 0.0 0.74 9.2 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein T2SSE PF00437.20 RKO87988.1 - 0.042 12.9 0.0 1.7 7.7 0.0 2.4 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_7 PF12775.7 RKO87988.1 - 0.13 11.7 0.0 23 4.4 0.0 2.5 2 0 0 2 2 2 0 P-loop containing dynein motor region DNA_pol_phi PF04931.13 RKO87988.1 - 7.9 4.4 17.9 13 3.8 17.9 1.2 1 0 0 1 1 1 0 DNA polymerase phi Proteasome PF00227.26 RKO87989.1 - 1.6e-21 76.6 0.0 1.9e-21 76.4 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit Nefa_Nip30_N PF10187.9 RKO87990.1 - 1.3e-10 41.6 6.3 5.2e-10 39.6 6.3 1.9 1 1 0 1 1 1 1 N-terminal domain of NEFA-interacting nuclear protein NIP30 CsgA PF17334.2 RKO87990.1 - 0.0002 22.0 1.3 0.00032 21.4 1.3 1.2 1 0 0 1 1 1 1 Minor curli fiber component A DUF4588 PF15251.6 RKO87990.1 - 0.043 13.6 0.1 0.061 13.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4588) Ank_4 PF13637.6 RKO87991.1 - 0.026 15.1 0.0 1.5 9.5 0.0 3.0 2 1 1 3 3 3 0 Ankyrin repeats (many copies) Cpn60_TCP1 PF00118.24 RKO87992.1 - 1.1e-164 548.7 3.1 1.3e-164 548.5 3.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Zip PF02535.22 RKO87994.1 - 1.3e-21 77.1 7.8 3.7e-21 75.7 7.8 1.6 1 1 0 1 1 1 1 ZIP Zinc transporter MIOX PF05153.15 RKO87995.1 - 3.5e-100 334.7 0.3 4e-100 334.5 0.3 1.0 1 0 0 1 1 1 1 Myo-inositol oxygenase HD PF01966.22 RKO87995.1 - 0.0028 17.9 0.0 0.058 13.6 0.0 2.4 2 0 0 2 2 2 1 HD domain DUF1706 PF08020.11 RKO87995.1 - 0.12 12.3 0.4 1.5 8.7 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1706) HD_6 PF18019.1 RKO87995.1 - 0.12 12.4 0.0 0.31 11.1 0.0 1.6 2 0 0 2 2 2 0 HD domain CBS PF00571.28 RKO87996.1 - 2e-25 89.0 2.4 2.1e-08 34.5 0.1 4.4 4 0 0 4 4 4 4 CBS domain Ribosomal_L9_C PF03948.14 RKO87996.1 - 0.076 13.5 0.0 0.16 12.4 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein L9, C-terminal domain EF-hand_13 PF17958.1 RKO87998.1 - 0.15 11.9 0.2 4.3 7.2 0.0 2.5 2 0 0 2 2 2 0 EF-hand domain RhlB PF12300.8 RKO87998.1 - 4.2 7.5 7.5 0.55 10.4 2.0 2.0 2 0 0 2 2 2 0 ATP-dependent RNA helicase RhlB Nuc_deoxyrib_tr PF05014.15 RKO87999.1 - 0.1 12.6 0.1 0.21 11.6 0.1 1.5 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase Baculo_LEF5_C PF11792.8 RKO88000.1 - 0.1 12.3 0.0 0.23 11.2 0.0 1.6 1 0 0 1 1 1 0 Baculoviridae late expression factor 5 C-terminal domain SRP14 PF02290.15 RKO88001.1 - 3.6e-11 43.3 0.0 5.3e-11 42.7 0.0 1.3 1 0 0 1 1 1 1 Signal recognition particle 14kD protein DUF3565 PF12088.8 RKO88001.1 - 0.062 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3565) XLF PF09302.11 RKO88002.1 - 8.6e-14 52.1 0.0 1.5e-13 51.3 0.0 1.4 1 0 0 1 1 1 1 XLF-Cernunnos, XRcc4-like factor, NHEJ component Aldo_ket_red PF00248.21 RKO88003.1 - 4e-30 105.0 0.0 4.4e-30 104.9 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family Acyl-CoA_dh_1 PF00441.24 RKO88004.1 - 1.8e-30 106.1 0.4 3e-30 105.4 0.4 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 RKO88004.1 - 2.3e-21 75.8 0.0 4.1e-21 75.0 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 RKO88004.1 - 3.9e-14 53.3 0.0 6.6e-14 52.5 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 RKO88004.1 - 6.1e-12 46.0 0.2 6.1e-12 46.0 0.2 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain HpaB_N PF11794.8 RKO88004.1 - 0.099 12.3 0.0 0.21 11.2 0.0 1.6 1 0 0 1 1 1 0 4-hydroxyphenylacetate 3-hydroxylase N terminal BAH PF01426.18 RKO88006.1 - 0.0057 16.5 0.1 0.0081 16.0 0.1 1.3 1 0 0 1 1 1 1 BAH domain PQ-loop PF04193.14 RKO88007.1 - 1.6e-37 127.1 9.2 1e-21 76.4 3.2 2.9 2 0 0 2 2 2 2 PQ loop repeat DUF202 PF02656.15 RKO88007.1 - 0.16 12.5 6.8 3.5 8.1 4.8 3.5 2 1 0 2 2 2 0 Domain of unknown function (DUF202) Peptidase_M48_N PF16491.5 RKO88007.1 - 0.89 9.4 6.0 0.17 11.7 2.1 1.7 2 0 0 2 2 2 0 CAAX prenyl protease N-terminal, five membrane helices DUF2345 PF10106.9 RKO88008.1 - 0.069 13.0 5.9 0.21 11.4 0.5 4.1 3 1 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2345) DUF4369 PF14289.6 RKO88008.1 - 9.4 6.8 8.3 4.6 7.8 0.1 4.6 5 1 0 5 5 5 0 Domain of unknown function (DUF4369) MOR2-PAG1_N PF14222.6 RKO88009.1 - 0.00024 20.2 0.0 0.011 14.7 0.0 2.3 3 0 0 3 3 3 2 Cell morphogenesis N-terminal MOR2-PAG1_C PF14225.6 RKO88009.1 - 0.001 19.0 0.0 0.02 14.8 0.0 2.6 2 0 0 2 2 2 1 Cell morphogenesis C-terminal SEP PF08059.13 RKO88010.1 - 1.6e-27 95.9 0.0 3.7e-27 94.7 0.0 1.7 1 0 0 1 1 1 1 SEP domain UBX PF00789.20 RKO88010.1 - 4.2e-15 55.7 0.0 7.1e-15 55.0 0.0 1.3 1 0 0 1 1 1 1 UBX domain UBA_4 PF14555.6 RKO88010.1 - 1.3e-11 44.1 0.5 2.7e-11 43.1 0.5 1.5 1 0 0 1 1 1 1 UBA-like domain TAP_C PF03943.13 RKO88010.1 - 0.031 13.9 0.0 0.052 13.2 0.0 1.3 1 0 0 1 1 1 0 TAP C-terminal domain Abhydrolase_2 PF02230.16 RKO88011.1 - 3.8e-13 49.7 0.0 1.2e-10 41.6 0.0 2.1 2 0 0 2 2 2 2 Phospholipase/Carboxylesterase Abhydrolase_4 PF08386.10 RKO88011.1 - 0.0065 16.6 0.0 0.011 15.8 0.0 1.3 1 0 0 1 1 1 1 TAP-like protein Abhydrolase_1 PF00561.20 RKO88011.1 - 0.023 14.4 0.2 0.21 11.2 0.3 2.1 1 1 1 2 2 2 0 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 RKO88011.1 - 0.056 12.9 0.0 0.098 12.1 0.0 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family BAAT_C PF08840.11 RKO88011.1 - 0.23 11.3 0.2 14 5.5 0.4 2.1 1 1 1 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal Hydrolase PF00702.26 RKO88012.1 - 2.1e-06 28.2 0.0 2.3e-06 28.0 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 RKO88012.1 - 3.1e-06 27.4 0.0 3.4e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 RKO88012.1 - 0.018 15.1 0.0 0.033 14.2 0.0 1.5 1 0 0 1 1 1 0 HAD-hyrolase-like PPR_2 PF13041.6 RKO88013.1 - 3.2e-19 68.9 0.0 0.043 14.0 0.0 8.3 7 2 2 9 9 9 4 PPR repeat family PPR_long PF17177.4 RKO88013.1 - 6.1e-10 38.8 0.0 0.00029 20.3 0.0 4.0 4 0 0 4 4 4 3 Pentacotripeptide-repeat region of PRORP PPR PF01535.20 RKO88013.1 - 1.1e-08 34.8 0.0 1.9 8.9 0.0 6.8 6 0 0 6 6 6 2 PPR repeat TPR_19 PF14559.6 RKO88013.1 - 1.4e-05 25.5 0.0 0.064 13.8 0.0 4.4 4 0 0 4 4 4 1 Tetratricopeptide repeat PPR_3 PF13812.6 RKO88013.1 - 1.4e-05 25.0 0.0 2.2 8.4 0.0 5.3 6 0 0 6 6 6 1 Pentatricopeptide repeat domain TPR_16 PF13432.6 RKO88013.1 - 0.00025 21.6 4.6 0.041 14.5 0.0 5.6 5 2 0 5 5 5 1 Tetratricopeptide repeat PPR_1 PF12854.7 RKO88013.1 - 0.0059 16.3 0.0 1.9 8.3 0.0 4.1 5 0 0 5 5 5 1 PPR repeat TPR_4 PF07721.14 RKO88013.1 - 0.41 11.4 7.7 1.9e+02 3.2 0.2 5.9 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO88013.1 - 4.3 8.4 20.1 2.8 9.0 0.0 7.4 7 3 3 10 10 10 0 Tetratricopeptide repeat MCLC PF05934.11 RKO88014.1 - 0.011 14.5 0.7 0.014 14.1 0.7 1.1 1 0 0 1 1 1 0 Mid-1-related chloride channel (MCLC) Antifungal_prot PF11402.8 RKO88015.1 - 0.26 11.5 3.7 0.17 12.2 1.0 1.9 2 0 0 2 2 2 0 Antifungal protein ABC_membrane PF00664.23 RKO88016.1 - 3.3e-05 23.7 0.1 4.2e-05 23.3 0.1 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_membrane PF00664.23 RKO88017.1 - 3.3e-10 40.1 2.7 3.8e-10 39.9 2.7 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Ribosomal_L10 PF00466.20 RKO88018.1 - 6.8e-24 83.9 0.9 1.4e-23 82.9 0.2 1.8 2 1 0 2 2 2 1 Ribosomal protein L10 Ribosomal_60s PF00428.19 RKO88018.1 - 9.1e-20 71.1 3.4 1.2e-19 70.7 1.9 1.9 2 0 0 2 2 2 1 60s Acidic ribosomal protein RL10P_insert PF17777.1 RKO88018.1 - 4e-19 68.4 0.1 8e-19 67.4 0.1 1.5 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P BPA_C PF18040.1 RKO88018.1 - 0.062 13.2 0.3 1 9.3 0.0 2.7 2 1 1 3 3 3 0 beta porphyranase A C-terminal Beta-lactamase PF00144.24 RKO88019.1 - 6.1e-56 190.0 2.1 8.8e-56 189.5 2.1 1.1 1 0 0 1 1 1 1 Beta-lactamase DUF3471 PF11954.8 RKO88019.1 - 2.6e-09 37.5 0.0 4.3e-09 36.8 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3471) Peptidase_S11 PF00768.20 RKO88019.1 - 0.033 13.6 0.0 0.053 12.9 0.0 1.2 1 0 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase DUF3886 PF13025.6 RKO88019.1 - 1 9.6 5.0 2.4 8.4 5.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3886) Mis12 PF05859.12 RKO88020.1 - 9.6e-20 71.0 0.1 1.8e-19 70.1 0.1 1.5 1 0 0 1 1 1 1 Mis12 protein TMP_2 PF06791.13 RKO88020.1 - 0.014 15.0 0.4 0.024 14.3 0.4 1.4 1 0 0 1 1 1 0 Prophage tail length tape measure protein Spc7 PF08317.11 RKO88020.1 - 0.044 12.7 0.2 0.064 12.1 0.2 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein ThiD2 PF17792.1 RKO88020.1 - 1.1 9.8 8.4 0.64 10.5 1.1 3.0 1 1 1 2 2 2 0 ThiD2 family Kri1_C PF12936.7 RKO88021.1 - 5.2e-22 77.8 0.3 5.2e-22 77.8 0.3 2.4 3 0 0 3 3 3 1 KRI1-like family C-terminal DUF3682 PF12446.8 RKO88022.1 - 0.0028 18.1 0.6 0.0028 18.1 0.6 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF3682) RVT_1 PF00078.27 RKO88023.1 - 0.069 12.7 0.0 0.072 12.6 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Endostatin PF06482.11 RKO88024.1 - 0.15 11.5 2.1 0.21 11.0 1.7 1.5 1 1 0 1 1 1 0 Collagenase NC10 and Endostatin Lact-deh-memb PF09330.11 RKO88027.1 - 0.054 12.8 0.0 0.082 12.2 0.0 1.2 1 0 0 1 1 1 0 D-lactate dehydrogenase, membrane binding TFIIA PF03153.13 RKO88028.1 - 0.008 16.2 25.3 0.048 13.7 19.7 2.4 2 0 0 2 2 2 2 Transcription factor IIA, alpha/beta subunit TetR_C_14 PF17754.1 RKO88028.1 - 0.026 14.5 0.1 0.15 12.0 0.0 2.3 2 0 0 2 2 2 0 MftR C-terminal domain Spt20 PF12090.8 RKO88028.1 - 0.37 10.4 16.4 0.72 9.4 16.4 1.4 1 0 0 1 1 1 0 Spt20 family DUF1980 PF09323.10 RKO88028.1 - 0.7 9.8 2.9 1.2 9.0 2.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) TMEM214 PF10151.9 RKO88028.1 - 8.6 4.7 9.0 13 4.1 9.0 1.2 1 0 0 1 1 1 0 TMEM214, C-terminal, caspase 4 activator RabGAP-TBC PF00566.18 RKO88029.1 - 1.8e-12 47.4 3.4 4.2e-11 42.9 0.3 2.1 2 0 0 2 2 2 2 Rab-GTPase-TBC domain Mhr1 PF12829.7 RKO88029.1 - 0.067 13.3 0.1 0.16 12.1 0.1 1.7 1 0 0 1 1 1 0 Transcriptional regulation of mitochondrial recombination Tim17 PF02466.19 RKO88030.1 - 5.6e-32 110.4 5.1 6.3e-32 110.2 5.1 1.0 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Serine_protease PF18405.1 RKO88030.1 - 0.0018 17.5 0.0 0.0023 17.2 0.0 1.1 1 0 0 1 1 1 1 Gammaproteobacterial serine protease Ub-Mut7C PF14451.6 RKO88031.1 - 0.061 13.2 0.0 0.95 9.3 0.0 2.4 1 1 1 2 2 2 0 Mut7-C ubiquitin Polyoma_coat2 PF00761.20 RKO88035.1 - 0.077 12.7 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Polyomavirus coat protein Peptidase_S8 PF00082.22 RKO88037.1 - 2.6e-39 135.3 0.2 3.5e-39 134.8 0.2 1.1 1 0 0 1 1 1 1 Subtilase family fn3_5 PF06280.12 RKO88037.1 - 0.052 14.2 0.0 0.09 13.5 0.0 1.3 1 0 0 1 1 1 0 Fn3-like domain MRP-S25 PF13741.6 RKO88038.1 - 2.2e-16 60.2 3.5 1.7e-15 57.2 3.5 1.9 1 1 0 1 1 1 1 Mitochondrial ribosomal protein S25 MRP-S23 PF10484.9 RKO88038.1 - 6.6e-09 36.1 0.2 0.00043 20.5 0.0 2.2 2 0 0 2 2 2 2 Mitochondrial ribosomal protein S23 Nup160 PF11715.8 RKO88039.1 - 7.3e-32 110.7 0.0 3.1e-30 105.4 0.0 2.8 1 1 0 1 1 1 1 Nucleoporin Nup120/160 DEAD PF00270.29 RKO88040.1 - 9.3e-39 133.0 0.1 5.6e-38 130.4 0.1 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO88040.1 - 1.3e-21 77.1 0.0 4.1e-20 72.2 0.0 3.1 4 0 0 4 4 4 1 Helicase conserved C-terminal domain HEM4 PF02602.15 RKO88040.1 - 0.021 14.2 0.1 0.036 13.4 0.1 1.3 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD ResIII PF04851.15 RKO88040.1 - 0.028 14.4 0.1 0.075 13.0 0.1 1.8 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit T4SS-DNA_transf PF02534.14 RKO88040.1 - 0.041 12.7 0.0 0.13 11.1 0.0 1.7 2 0 0 2 2 2 0 Type IV secretory system Conjugative DNA transfer Band_7 PF01145.25 RKO88043.1 - 1.3e-11 44.8 0.1 1.3e-11 44.8 0.1 3.0 1 1 1 3 3 3 1 SPFH domain / Band 7 family Cauli_AT PF03233.13 RKO88043.1 - 0.023 14.6 0.9 0.04 13.8 0.9 1.3 1 0 0 1 1 1 0 Aphid transmission protein Melibiase_2 PF16499.5 RKO88044.1 - 1.7e-21 76.6 0.6 2.2e-21 76.3 0.6 1.1 1 0 0 1 1 1 1 Alpha galactosidase A LEA_6 PF10714.9 RKO88045.1 - 0.038 14.0 1.1 0.22 11.6 0.3 2.1 2 0 0 2 2 2 0 Late embryogenesis abundant protein 18 LSM PF01423.22 RKO88048.1 - 1.4e-13 50.3 0.1 1.8e-13 50.0 0.1 1.1 1 0 0 1 1 1 1 LSM domain Hfq PF17209.3 RKO88048.1 - 0.004 16.8 0.1 0.0063 16.1 0.1 1.3 1 0 0 1 1 1 1 Hfq protein FANCL_C PF11793.8 RKO88049.1 - 4.6e-24 84.4 1.8 6.9e-24 83.8 1.8 1.2 1 0 0 1 1 1 1 FANCL C-terminal domain WD-3 PF09765.9 RKO88049.1 - 2.5e-18 66.4 0.0 3e-18 66.2 0.0 1.1 1 0 0 1 1 1 1 WD-repeat region zf-RING_2 PF13639.6 RKO88049.1 - 9.6e-07 29.0 3.7 1.6e-06 28.3 3.7 1.4 1 0 0 1 1 1 1 Ring finger domain zf-HC5HC2H PF13771.6 RKO88049.1 - 0.00019 21.6 0.2 0.00032 20.9 0.2 1.5 1 1 0 1 1 1 1 PHD-like zinc-binding domain zf-HC5HC2H_2 PF13832.6 RKO88049.1 - 0.013 15.6 0.4 0.028 14.6 0.2 1.7 2 0 0 2 2 2 0 PHD-zinc-finger like domain zf-ANAPC11 PF12861.7 RKO88049.1 - 0.023 14.7 4.2 0.14 12.2 3.3 2.7 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING-like PF08746.11 RKO88049.1 - 0.034 14.5 3.5 0.046 14.0 0.8 2.2 2 0 0 2 2 2 0 RING-like domain PHD PF00628.29 RKO88049.1 - 0.034 14.0 3.6 0.077 12.9 3.5 1.7 1 1 0 1 1 1 0 PHD-finger zf-rbx1 PF12678.7 RKO88049.1 - 0.04 14.2 6.6 0.12 12.7 6.1 2.2 2 1 0 2 2 1 0 RING-H2 zinc finger domain RINGv PF12906.7 RKO88049.1 - 0.072 13.2 1.0 0.15 12.2 0.6 1.8 2 1 0 2 2 2 0 RING-variant domain zf-C3HC4_2 PF13923.6 RKO88049.1 - 2.6 8.0 7.0 1.2 9.0 2.3 2.5 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 RKO88049.1 - 8.9 6.2 7.0 59 3.5 7.0 2.3 1 1 0 1 1 1 0 RING-like zinc finger ABC2_membrane PF01061.24 RKO88050.1 - 1.8e-44 151.7 16.0 1.8e-44 151.7 16.0 1.6 2 0 0 2 2 2 1 ABC-2 type transporter PDR_CDR PF06422.12 RKO88050.1 - 2.6e-18 65.7 0.1 2.6e-18 65.7 0.1 2.1 2 0 0 2 2 2 1 CDR ABC transporter ABC_tran PF00005.27 RKO88050.1 - 7.4e-14 52.4 0.0 1.4e-13 51.6 0.0 1.5 1 0 0 1 1 1 1 ABC transporter ABC_trans_N PF14510.6 RKO88050.1 - 1.7e-07 31.7 0.0 3.8e-07 30.6 0.0 1.6 1 0 0 1 1 1 1 ABC-transporter N-terminal ABC2_membrane_3 PF12698.7 RKO88050.1 - 9.3e-07 28.3 19.6 1.7e-06 27.4 19.6 1.5 1 0 0 1 1 1 1 ABC-2 family transporter protein LMBR1 PF04791.16 RKO88051.1 - 1.8e-15 56.9 0.0 4.1e-15 55.7 0.0 1.6 1 1 0 1 1 1 1 LMBR1-like membrane protein LtrA PF06772.11 RKO88051.1 - 0.0073 15.6 0.3 0.017 14.4 0.2 1.6 2 0 0 2 2 2 1 Bacterial low temperature requirement A protein (LtrA) Hexapep PF00132.24 RKO88052.1 - 1.6e-07 30.7 22.2 5.1e-06 26.0 3.8 4.6 2 2 3 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 RKO88052.1 - 0.0001 22.0 20.5 0.0049 16.6 0.4 3.4 3 0 0 3 3 3 3 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 RKO88052.1 - 0.014 14.4 0.5 0.84 8.5 0.1 2.0 1 1 1 2 2 2 0 L-fucokinase DUF4954 PF16314.5 RKO88052.1 - 0.089 10.9 0.8 0.11 10.7 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) ABC_tran PF00005.27 RKO88053.1 - 3.2e-13 50.4 0.1 3.5e-13 50.2 0.1 1.0 1 0 0 1 1 1 1 ABC transporter TraF_2 PF13729.6 RKO88054.1 - 0.15 11.4 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon, TraF, protein DUF2303 PF10065.9 RKO88056.1 - 0.18 11.0 0.0 0.24 10.5 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2303) NAD_binding_2 PF03446.15 RKO88057.1 - 5.2e-13 49.5 0.0 6.1e-13 49.2 0.0 1.0 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 RKO88057.1 - 0.00019 21.9 0.0 0.00025 21.5 0.0 1.2 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 RKO88057.1 - 0.03 14.4 0.0 0.037 14.1 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 RKO88057.1 - 0.056 13.7 0.0 0.056 13.7 0.0 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 RKO88057.1 - 0.22 11.4 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Septin PF00735.18 RKO88058.1 - 7.9e-80 268.1 0.0 1.2e-79 267.6 0.0 1.2 1 0 0 1 1 1 1 Septin AAA_23 PF13476.6 RKO88058.1 - 0.03 14.8 0.1 0.042 14.4 0.1 1.2 1 0 0 1 1 1 0 AAA domain K_channel_TID PF07941.11 RKO88059.1 - 0.041 14.3 3.2 0.084 13.3 3.2 1.5 1 0 0 1 1 1 0 Potassium channel Kv1.4 tandem inactivation domain EF-hand_7 PF13499.6 RKO88061.1 - 0.12 12.9 0.1 13 6.3 0.0 3.4 3 1 0 3 3 3 0 EF-hand domain pair NAD_kinase PF01513.21 RKO88062.1 - 1.6e-18 66.9 0.0 1.7e-18 66.8 0.0 1.0 1 0 0 1 1 1 1 ATP-NAD kinase Tim54 PF11711.8 RKO88065.1 - 0.016 14.0 9.0 0.022 13.6 9.0 1.3 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 MMU163 PF17119.5 RKO88065.1 - 0.071 12.3 1.4 0.13 11.4 1.4 1.4 1 0 0 1 1 1 0 Mitochondrial protein up-regulated during meiosis Med15 PF09606.10 RKO88065.1 - 0.12 11.1 47.1 0.14 10.8 47.1 1.2 1 0 0 1 1 1 0 ARC105 or Med15 subunit of Mediator complex non-fungal CSG2 PF16965.5 RKO88065.1 - 0.18 10.7 7.1 0.26 10.2 7.1 1.1 1 0 0 1 1 1 0 Ceramide synthase regulator Borrelia_P83 PF05262.11 RKO88065.1 - 0.2 10.1 11.5 0.24 9.9 11.5 1.3 1 0 0 1 1 1 0 Borrelia P83/100 protein MCU PF04678.13 RKO88065.1 - 0.23 11.5 10.6 0.49 10.5 10.6 1.5 1 0 0 1 1 1 0 Mitochondrial calcium uniporter SpoIIP PF07454.11 RKO88065.1 - 0.34 10.3 11.5 0.55 9.6 11.5 1.3 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) DUF1168 PF06658.12 RKO88065.1 - 0.43 10.4 20.0 0.98 9.2 20.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) Peptidase_S64 PF08192.11 RKO88065.1 - 0.51 8.8 8.2 0.61 8.5 8.2 1.1 1 0 0 1 1 1 0 Peptidase family S64 eIF-3_zeta PF05091.12 RKO88065.1 - 0.55 9.1 16.5 0.74 8.7 16.5 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) Plasmodium_Vir PF05795.11 RKO88065.1 - 0.57 9.6 3.8 0.67 9.3 3.8 1.3 1 0 0 1 1 1 0 Plasmodium vivax Vir protein Rrn6 PF10214.9 RKO88065.1 - 0.67 8.4 20.2 0.97 7.8 20.2 1.4 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor MDM10 PF12519.8 RKO88065.1 - 1 8.1 9.7 1.4 7.7 9.7 1.2 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 SID-1_RNA_chan PF13965.6 RKO88065.1 - 2.2 6.6 3.7 2.4 6.4 3.7 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Zip PF02535.22 RKO88065.1 - 2.7 7.1 4.6 4.2 6.5 4.6 1.3 1 0 0 1 1 1 0 ZIP Zinc transporter SLC12 PF03522.15 RKO88065.1 - 3 6.8 15.1 4.7 6.1 15.1 1.2 1 0 0 1 1 1 0 Solute carrier family 12 Membralin PF09746.9 RKO88065.1 - 3.4 6.6 9.2 4.9 6.1 9.2 1.2 1 0 0 1 1 1 0 Tumour-associated protein LMBR1 PF04791.16 RKO88065.1 - 6.1 5.6 4.4 6.9 5.5 4.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Thioredoxin_15 PF18403.1 RKO88065.1 - 6.5 6.6 7.9 11 5.8 7.9 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain TERB2 PF15101.6 RKO88065.1 - 7.2 6.6 21.0 19 5.3 21.0 1.7 1 0 0 1 1 1 0 Telomere-associated protein TERB2 Nitr_red_assoc PF09655.10 RKO88065.1 - 8.9 6.9 18.2 23 5.6 18.2 1.7 1 0 0 1 1 1 0 Conserved nitrate reductase-associated protein (Nitr_red_assoc) Med25_VWA PF11265.8 RKO88067.1 - 2.8e-21 76.3 0.0 2.6e-16 60.1 0.0 2.1 2 0 0 2 2 2 2 Mediator complex subunit 25 von Willebrand factor type A VWA PF00092.28 RKO88067.1 - 0.0025 18.1 0.0 1.7 8.9 0.0 2.4 2 0 0 2 2 2 2 von Willebrand factor type A domain VWA_2 PF13519.6 RKO88067.1 - 0.0048 17.5 0.0 2.8 8.6 0.0 2.4 2 0 0 2 2 2 2 von Willebrand factor type A domain Peptidase_S10 PF00450.22 RKO88068.1 - 2.2e-13 50.4 0.0 4.7e-12 46.0 0.0 2.0 1 1 0 1 1 1 1 Serine carboxypeptidase BCDHK_Adom3 PF10436.9 RKO88070.1 - 2.8e-11 43.5 0.0 3.7e-11 43.1 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase GAF_2 PF13185.6 RKO88071.1 - 4.1e-07 30.4 0.0 4.9e-07 30.1 0.0 1.2 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 RKO88071.1 - 2.3e-06 28.3 0.0 2.4e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 GAF domain DUF1577 PF07614.11 RKO88071.1 - 0.22 10.6 0.0 0.29 10.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1577) SSrecog PF03531.14 RKO88072.1 - 1.4e-21 76.1 0.1 6.3e-21 74.1 0.0 2.1 2 0 0 2 2 2 1 Structure-specific recognition protein (SSRP1) HMG_box PF00505.19 RKO88072.1 - 7.5e-09 35.9 0.2 1.7e-08 34.7 0.2 1.6 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 RKO88072.1 - 0.0001 22.9 0.2 0.00021 21.8 0.2 1.5 1 0 0 1 1 1 1 HMG-box domain POB3_N PF17292.2 RKO88072.1 - 0.00023 21.5 0.0 0.00064 20.1 0.0 1.7 2 0 0 2 2 2 1 POB3-like N-terminal PH domain Acetyltransf_1 PF00583.25 RKO88073.1 - 2e-07 31.3 0.1 4.1e-07 30.2 0.1 1.5 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 RKO88073.1 - 0.016 15.2 0.0 0.026 14.5 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 RKO88073.1 - 0.031 14.4 0.4 0.081 13.1 0.4 1.7 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 RKO88073.1 - 0.11 12.6 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DEAD PF00270.29 RKO88074.1 - 3.5e-33 114.8 0.1 4.6e-33 114.5 0.1 1.1 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_30 PF13604.6 RKO88074.1 - 0.025 14.3 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain Abhydrolase_8 PF06259.12 RKO88074.1 - 0.15 11.7 0.0 0.35 10.5 0.0 1.6 2 0 0 2 2 2 0 Alpha/beta hydrolase DUF4246 PF14033.6 RKO88077.1 - 4.2e-16 59.1 0.0 1.5e-08 34.2 0.0 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF4246) HRM PF02793.22 RKO88078.1 - 2.6e-21 75.6 21.0 5.2e-05 23.5 0.2 4.5 4 1 0 4 4 4 4 Hormone receptor domain Ribosomal_L40e PF01020.17 RKO88078.1 - 0.00016 21.5 0.0 8.8 6.3 0.0 4.1 4 0 0 4 4 4 3 Ribosomal L40e family TRAF6_Z2 PF18048.1 RKO88078.1 - 1.9 8.7 10.2 37 4.5 0.2 4.7 4 0 0 4 4 4 0 TNF receptor-associated factor 6 zinc finger 2 Kelch_1 PF01344.25 RKO88080.1 - 4.1e-17 61.5 4.6 2.1e-05 24.0 0.2 4.6 4 0 0 4 4 4 4 Kelch motif Kelch_4 PF13418.6 RKO88080.1 - 4e-15 55.6 4.0 0.0014 18.6 0.1 5.1 4 0 0 4 4 4 4 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO88080.1 - 1.5e-13 50.5 6.1 0.0003 21.0 0.2 4.8 4 0 0 4 4 4 3 Kelch motif Kelch_3 PF13415.6 RKO88080.1 - 2.7e-10 40.3 11.7 0.0036 17.5 0.1 5.6 5 0 0 5 5 5 4 Galactose oxidase, central domain SH3_1 PF00018.28 RKO88080.1 - 1.1e-09 37.7 0.1 3.7e-09 36.1 0.0 2.0 2 0 0 2 2 2 1 SH3 domain Kelch_5 PF13854.6 RKO88080.1 - 1.3e-09 37.8 6.9 0.43 10.6 0.1 6.0 6 0 0 6 6 6 4 Kelch motif Kelch_2 PF07646.15 RKO88080.1 - 1.6e-09 37.3 0.9 0.026 14.5 0.1 5.2 5 0 0 5 5 5 2 Kelch motif SH3_9 PF14604.6 RKO88080.1 - 2e-09 37.1 0.0 7.8e-09 35.3 0.0 2.0 1 0 0 1 1 1 1 Variant SH3 domain SH3_2 PF07653.17 RKO88080.1 - 0.0042 16.7 0.0 0.028 14.1 0.0 2.3 2 0 0 2 2 2 1 Variant SH3 domain RhoGEF PF00621.20 RKO88082.1 - 4.2e-35 121.6 0.0 2.2e-34 119.3 0.0 2.1 2 0 0 2 2 2 1 RhoGEF domain DEP PF00610.21 RKO88082.1 - 3e-13 49.6 0.0 6e-13 48.6 0.0 1.5 1 0 0 1 1 1 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) PH_5 PF15405.6 RKO88082.1 - 3.3e-08 33.7 0.1 2.1e-07 31.1 0.0 2.3 1 1 1 2 2 2 1 Pleckstrin homology domain PH PF00169.29 RKO88082.1 - 1.3e-07 32.1 0.0 2.6e-07 31.1 0.0 1.5 1 0 0 1 1 1 1 PH domain PH_13 PF16652.5 RKO88082.1 - 0.0035 17.2 0.0 0.019 14.8 0.0 2.1 1 1 0 1 1 1 1 Pleckstrin homology domain CNH PF00780.22 RKO88082.1 - 0.021 14.5 0.0 0.032 13.8 0.0 1.3 1 0 0 1 1 1 0 CNH domain IQ_SEC7_PH PF16453.5 RKO88082.1 - 0.035 14.1 0.0 0.087 12.8 0.0 1.6 1 0 0 1 1 1 0 PH domain Chromo PF00385.24 RKO88083.1 - 1.6e-06 28.0 0.1 0.002 18.0 0.1 2.4 2 0 0 2 2 2 2 Chromo (CHRromatin Organisation MOdifier) domain PHD PF00628.29 RKO88083.1 - 0.0087 15.9 3.0 0.014 15.3 3.0 1.3 1 0 0 1 1 1 1 PHD-finger Rubredoxin_2 PF18073.1 RKO88083.1 - 0.037 13.8 0.5 0.13 12.0 0.5 1.9 1 0 0 1 1 1 0 Rubredoxin metal binding domain RNA_pol_Rpb1_5 PF04998.17 RKO88086.1 - 1.1e-11 44.7 0.0 1.3e-11 44.5 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 SNase PF00565.17 RKO88087.1 - 1.9e-60 202.0 2.1 5.8e-21 75.0 0.0 6.2 5 1 1 6 6 6 5 Staphylococcal nuclease homologue TUDOR PF00567.24 RKO88087.1 - 8.9e-26 90.3 0.0 2e-25 89.2 0.0 1.6 2 0 0 2 2 2 1 Tudor domain Agenet PF05641.12 RKO88087.1 - 2.2e-05 24.8 0.1 0.0001 22.7 0.1 2.3 1 0 0 1 1 1 1 Agenet domain B5 PF03484.15 RKO88087.1 - 0.086 13.2 0.0 0.27 11.6 0.0 1.8 1 0 0 1 1 1 0 tRNA synthetase B5 domain T2SSE PF00437.20 RKO88088.1 - 1.2 8.1 3.3 2.1 7.3 3.3 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein LigB PF02900.18 RKO88089.1 - 0.11 11.5 0.0 0.14 11.2 0.0 1.2 1 0 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase DUF3658 PF12395.8 RKO88090.1 - 0.049 13.5 0.1 0.67 9.9 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function DUF5599 PF18141.1 RKO88090.1 - 0.049 13.9 0.1 0.067 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5599) RNA_pol_Rpb5_C PF01191.19 RKO88091.1 - 1.7e-17 63.0 0.0 2.9e-17 62.3 0.0 1.4 2 0 0 2 2 2 1 RNA polymerase Rpb5, C-terminal domain Peptidase_U32 PF01136.19 RKO88091.1 - 0.044 12.9 0.0 0.046 12.9 0.0 1.0 1 0 0 1 1 1 0 Peptidase family U32 cNMP_binding PF00027.29 RKO88092.1 - 4.6e-13 49.0 0.0 7.9e-13 48.3 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain DNA_pol3_beta_3 PF02768.15 RKO88092.1 - 0.021 14.7 4.4 0.048 13.5 4.4 1.6 1 1 0 1 1 1 0 DNA polymerase III beta subunit, C-terminal domain MscS_TM PF12794.7 RKO88092.1 - 0.11 11.3 4.6 0.14 11.0 4.6 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Abhydrolase_1 PF00561.20 RKO88093.1 - 3.5e-22 79.3 0.2 6.1e-19 68.7 0.2 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 RKO88093.1 - 1.5e-16 60.3 0.0 2.9e-16 59.4 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein BUD22 PF09073.10 RKO88095.1 - 0.044 13.1 13.0 0.055 12.8 13.0 1.2 1 0 0 1 1 1 0 BUD22 Nop14 PF04147.12 RKO88095.1 - 0.4 8.8 9.8 0.48 8.6 9.8 1.1 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 RKO88095.1 - 0.41 10.0 10.6 0.51 9.7 10.6 1.1 1 0 0 1 1 1 0 SDA1 PPP4R2 PF09184.11 RKO88095.1 - 4.8 6.7 15.6 5.9 6.4 15.6 1.1 1 0 0 1 1 1 0 PPP4R2 Hid1 PF12722.7 RKO88095.1 - 8.9 4.3 8.2 10 4.1 8.2 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Peroxin-13_N PF04088.13 RKO88096.1 - 3e-37 128.1 0.4 4.2e-37 127.6 0.4 1.2 1 0 0 1 1 1 1 Peroxin 13, N-terminal region SH3_9 PF14604.6 RKO88096.1 - 1.8e-14 53.3 0.0 2.8e-14 52.7 0.0 1.3 1 0 0 1 1 1 1 Variant SH3 domain SH3_2 PF07653.17 RKO88096.1 - 9.6e-13 47.6 0.0 1.5e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO88096.1 - 2.2e-12 46.4 0.0 4.5e-12 45.4 0.0 1.5 1 0 0 1 1 1 1 SH3 domain Pex2_Pex12 PF04757.14 RKO88096.1 - 0.014 15.0 0.0 0.019 14.6 0.0 1.2 1 0 0 1 1 1 0 Pex2 / Pex12 amino terminal region DUF2062 PF09835.9 RKO88097.1 - 1.3e-13 51.0 3.4 1.9e-13 50.5 3.4 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2062) DUF2613 PF11021.8 RKO88097.1 - 0.67 10.1 2.8 22 5.2 0.8 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2613) Ion_trans PF00520.31 RKO88098.1 - 2.4e-06 27.0 0.3 3.1e-06 26.6 0.3 1.2 1 0 0 1 1 1 1 Ion transport protein DUF2569 PF10754.9 RKO88098.1 - 0.13 12.7 2.8 0.3 11.5 2.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2569) Ion_trans PF00520.31 RKO88099.1 - 2e-06 27.2 0.2 2.6e-06 26.9 0.2 1.2 1 0 0 1 1 1 1 Ion transport protein Clat_adaptor_s PF01217.20 RKO88099.1 - 0.018 15.0 0.0 0.029 14.3 0.0 1.2 1 0 0 1 1 1 0 Clathrin adaptor complex small chain DUF2569 PF10754.9 RKO88099.1 - 0.13 12.7 2.8 0.3 11.5 2.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2569) RT_RNaseH_2 PF17919.1 RKO88101.1 - 0.00086 19.3 0.0 0.0016 18.5 0.0 1.4 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase Methyltransf_34 PF11312.8 RKO88103.1 - 7e-50 170.0 0.0 1.5e-49 169.0 0.0 1.5 1 1 0 1 1 1 1 Putative SAM-dependent methyltransferase MFS_2 PF13347.6 RKO88104.1 - 5.3e-11 41.7 11.8 7.7e-11 41.2 11.8 1.2 1 0 0 1 1 1 1 MFS/sugar transport protein MFS_1 PF07690.16 RKO88104.1 - 9.1e-11 41.3 22.0 8.7e-10 38.0 24.3 1.5 2 0 0 2 2 2 1 Major Facilitator Superfamily Metallophos PF00149.28 RKO88106.1 - 2.1e-27 97.0 0.1 2.5e-27 96.7 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 RKO88106.1 - 0.15 12.3 0.0 0.22 11.7 0.0 1.2 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain Brr6_like_C_C PF10104.9 RKO88107.1 - 8.6e-33 112.9 2.3 1e-32 112.7 2.3 1.0 1 0 0 1 1 1 1 Di-sulfide bridge nucleocytoplasmic transport domain DSL PF01414.19 RKO88107.1 - 0.048 13.9 1.3 0.11 12.8 1.3 1.7 1 1 0 1 1 1 0 Delta serrate ligand Usp PF00582.26 RKO88109.1 - 3.6e-23 82.6 2.3 5e-23 82.2 2.3 1.2 1 0 0 1 1 1 1 Universal stress protein family NIF3 PF01784.18 RKO88109.1 - 0.034 13.8 0.6 1.4 8.5 0.0 2.2 1 1 0 2 2 2 0 NIF3 (NGG1p interacting factor 3) SIS PF01380.22 RKO88109.1 - 0.077 12.8 0.1 0.14 12.0 0.1 1.4 1 0 0 1 1 1 0 SIS domain CMAS PF02353.20 RKO88110.1 - 2e-69 233.9 0.0 2.9e-69 233.4 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.6 RKO88110.1 - 3.9e-10 40.3 0.0 2.9e-09 37.5 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 RKO88110.1 - 9.8e-08 32.6 0.0 5.4e-07 30.2 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 RKO88110.1 - 9.9e-06 25.5 0.0 1.8e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO88110.1 - 0.0011 18.8 0.0 0.0016 18.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 RKO88110.1 - 0.02 14.0 0.0 0.032 13.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Methyltransf_12 PF08242.12 RKO88110.1 - 0.022 15.5 0.0 0.049 14.4 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 RKO88110.1 - 0.027 14.2 0.0 0.044 13.5 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 RKO88110.1 - 0.053 13.1 0.0 0.096 12.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_18 PF12847.7 RKO88110.1 - 0.057 13.3 0.0 0.094 12.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Cons_hypoth95 PF03602.15 RKO88110.1 - 0.062 12.9 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_16 PF10294.9 RKO88110.1 - 0.079 12.7 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase DUF3981 PF13139.6 RKO88110.1 - 0.085 13.2 0.1 20 5.6 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3981) ABC1 PF03109.16 RKO88111.1 - 4.8e-28 97.7 0.1 1.7e-27 95.9 0.0 1.8 2 0 0 2 2 2 1 ABC1 family Apq12 PF12716.7 RKO88111.1 - 0.18 11.7 0.8 0.53 10.3 0.8 1.7 1 0 0 1 1 1 0 Nuclear pore assembly and biogenesis IGFBP PF00219.18 RKO88112.1 - 0.082 13.6 0.5 0.23 12.1 0.5 1.7 1 0 0 1 1 1 0 Insulin-like growth factor binding protein Cpn60_TCP1 PF00118.24 RKO88113.1 - 3.7e-88 296.3 9.1 6.7e-88 295.4 9.1 1.4 1 1 0 1 1 1 1 TCP-1/cpn60 chaperonin family HSP70 PF00012.20 RKO88117.1 - 1.6e-83 281.0 10.7 1.6e-82 277.6 10.7 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 RKO88117.1 - 0.0014 17.5 1.4 0.29 9.9 0.0 2.3 2 0 0 2 2 2 2 MreB/Mbl protein Acyl_transf_3 PF01757.22 RKO88118.1 - 1.7e-10 40.5 4.1 2e-10 40.3 4.1 1.1 1 0 0 1 1 1 1 Acyltransferase family BAR_2 PF10455.9 RKO88119.1 - 1.2e-47 162.5 0.1 1.7e-47 162.0 0.1 1.2 1 0 0 1 1 1 1 Bin/amphiphysin/Rvs domain for vesicular trafficking BAR PF03114.18 RKO88119.1 - 2.3e-24 86.4 0.5 4.4e-24 85.4 0.5 1.5 1 1 0 1 1 1 1 BAR domain BAR_3 PF16746.5 RKO88119.1 - 2.7e-08 33.8 0.2 9.6e-08 32.0 0.0 1.8 2 1 0 2 2 2 1 BAR domain of APPL family Arfaptin PF06456.13 RKO88119.1 - 1.1e-05 25.2 0.5 0.00028 20.5 0.1 2.3 2 1 0 2 2 2 1 Arfaptin-like domain LKAAEAR PF15478.6 RKO88119.1 - 0.058 13.7 0.1 0.14 12.4 0.1 1.6 1 0 0 1 1 1 0 Family of unknown function with LKAAEAR motif Lipase_GDSL PF00657.22 RKO88120.1 - 4.6e-06 26.7 0.0 8.5e-06 25.9 0.0 1.4 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase HisKA PF00512.25 RKO88121.1 - 1.9e-19 69.4 0.1 4.4e-19 68.3 0.1 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c PF02518.26 RKO88121.1 - 2.7e-18 66.5 0.0 5.6e-18 65.5 0.0 1.5 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 RKO88121.1 - 0.00026 21.1 0.1 0.00056 20.1 0.1 1.5 1 0 0 1 1 1 1 Response regulator receiver domain WD40 PF00400.32 RKO88123.1 - 2.9e-10 40.6 6.0 5.7e-06 27.0 1.6 2.4 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO88123.1 - 5e-09 36.3 0.1 0.00035 20.8 0.0 1.9 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 RKO88123.1 - 0.018 15.0 0.0 0.023 14.6 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A Hira PF07569.11 RKO88123.1 - 0.039 13.7 0.0 0.099 12.3 0.0 1.7 1 1 0 1 1 1 0 TUP1-like enhancer of split Ku PF02735.16 RKO88124.1 - 1.1e-37 129.7 0.0 2e-37 128.9 0.0 1.4 1 0 0 1 1 1 1 Ku70/Ku80 beta-barrel domain Ku_N PF03731.15 RKO88124.1 - 5.3e-32 111.4 0.0 8.7e-32 110.6 0.0 1.4 1 0 0 1 1 1 1 Ku70/Ku80 N-terminal alpha/beta domain Ku_C PF03730.14 RKO88124.1 - 1.9e-13 50.9 0.3 1.4e-12 48.1 0.1 2.5 2 0 0 2 2 2 1 Ku70/Ku80 C-terminal arm SH3_9 PF14604.6 RKO88125.1 - 6.3e-12 45.2 0.4 3.3e-11 42.9 0.0 2.3 2 0 0 2 2 2 1 Variant SH3 domain PH PF00169.29 RKO88125.1 - 1.5e-11 44.8 0.0 2.8e-11 43.9 0.0 1.4 1 0 0 1 1 1 1 PH domain SH3_1 PF00018.28 RKO88125.1 - 1.9e-11 43.4 0.1 6.5e-11 41.7 0.1 1.9 2 0 0 2 2 2 1 SH3 domain SH3_2 PF07653.17 RKO88125.1 - 5.1e-10 38.9 0.0 1.2e-09 37.7 0.0 1.6 1 0 0 1 1 1 1 Variant SH3 domain SAM_2 PF07647.17 RKO88125.1 - 6.3e-05 23.0 0.0 0.0001 22.3 0.0 1.4 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) PH_11 PF15413.6 RKO88125.1 - 0.00011 22.5 0.8 0.0028 18.1 0.8 2.3 1 1 0 1 1 1 1 Pleckstrin homology domain SAM_1 PF00536.30 RKO88125.1 - 0.00073 19.9 0.0 0.0011 19.3 0.0 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) PH_9 PF15410.6 RKO88125.1 - 0.012 16.0 0.3 0.15 12.4 0.3 2.2 1 1 0 1 1 1 0 Pleckstrin homology domain SAM_Ste50p PF09235.10 RKO88125.1 - 0.16 12.3 0.0 0.49 10.7 0.0 1.8 1 1 0 1 1 1 0 Ste50p, sterile alpha motif CAP PF00188.26 RKO88126.1 - 8.8e-23 81.5 0.3 1.3e-22 80.9 0.3 1.3 1 0 0 1 1 1 1 Cysteine-rich secretory protein family DAGK_acc PF00609.19 RKO88130.1 - 4e-23 82.5 0.0 2.2e-15 57.4 0.0 3.1 3 0 0 3 3 3 2 Diacylglycerol kinase accessory domain DAGK_cat PF00781.24 RKO88130.1 - 5.9e-22 77.6 0.0 1e-21 76.9 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain C1_1 PF00130.22 RKO88130.1 - 8.9e-07 28.7 1.0 1.4e-06 28.1 1.0 1.3 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Zf_RING PF16744.5 RKO88130.1 - 0.037 14.1 1.6 0.078 13.1 1.6 1.5 1 0 0 1 1 1 0 KIAA1045 RING finger Zn_ribbon_17 PF17120.5 RKO88130.1 - 0.068 12.8 3.0 0.14 11.8 3.0 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Replicase PF03090.17 RKO88130.1 - 0.12 12.2 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 Replicase family zf-C3H2C3 PF17122.5 RKO88130.1 - 0.35 10.9 2.0 0.83 9.8 2.0 1.6 1 0 0 1 1 1 0 Zinc-finger zf-RING_2 PF13639.6 RKO88130.1 - 0.81 10.1 3.5 1.8 9.0 3.5 1.6 1 0 0 1 1 1 0 Ring finger domain PHD_4 PF16866.5 RKO88130.1 - 0.98 9.6 3.6 3.3 7.9 3.6 1.9 1 1 0 1 1 1 0 PHD-finger DUF1356 PF07092.12 RKO88131.1 - 6.5e-06 25.6 0.1 8.9e-06 25.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1356) Pkinase PF00069.25 RKO88132.1 - 9.8e-14 51.3 0.0 1.5e-12 47.4 0.0 2.0 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO88132.1 - 0.0064 15.8 0.0 0.0098 15.2 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase eIF-6 PF01912.18 RKO88133.1 - 0.00024 20.5 0.0 0.00033 20.1 0.0 1.2 1 0 0 1 1 1 1 eIF-6 family SNF2_N PF00176.23 RKO88136.1 - 0.0037 16.0 0.0 0.013 14.2 0.0 1.9 1 1 0 1 1 1 1 SNF2 family N-terminal domain Fer4_12 PF13353.6 RKO88136.1 - 0.095 13.0 0.0 1.2 9.4 0.0 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain Redoxin PF08534.10 RKO88137.1 - 4.1e-19 68.8 0.1 4.8e-19 68.5 0.1 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA PF00578.21 RKO88137.1 - 3.3e-07 30.3 0.0 3.4e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Stap_Strp_toxin PF01123.20 RKO88137.1 - 0.00026 21.8 0.0 0.0004 21.2 0.0 1.3 1 0 0 1 1 1 1 Staphylococcal/Streptococcal toxin, OB-fold domain DNA_pol3_delta PF06144.13 RKO88137.1 - 0.24 11.1 0.0 0.28 11.0 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase III, delta subunit SCP2 PF02036.17 RKO88138.1 - 2.8e-22 79.1 1.0 3.9e-22 78.6 1.0 1.2 1 0 0 1 1 1 1 SCP-2 sterol transfer family Alkyl_sulf_C PF14864.6 RKO88138.1 - 0.00046 20.5 0.1 0.00059 20.1 0.1 1.1 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal OPT PF03169.15 RKO88139.1 - 4.6e-117 392.2 34.0 5.1e-117 392.0 34.0 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein Abhydrolase_1 PF00561.20 RKO88140.1 - 1.5e-16 60.8 0.0 1.9e-16 60.5 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 RKO88140.1 - 5.1e-11 42.3 0.0 6.3e-11 42.0 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO88140.1 - 2.7e-08 34.7 0.7 3.6e-08 34.3 0.7 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Esterase PF00756.20 RKO88140.1 - 1.8e-06 27.8 0.0 2.2e-06 27.5 0.0 1.1 1 0 0 1 1 1 1 Putative esterase Ndr PF03096.14 RKO88140.1 - 0.00061 18.6 0.0 0.0008 18.2 0.0 1.1 1 0 0 1 1 1 1 Ndr family LIDHydrolase PF10230.9 RKO88140.1 - 0.0014 18.2 0.0 0.002 17.8 0.0 1.3 1 1 0 1 1 1 1 Lipid-droplet associated hydrolase Ser_hydrolase PF06821.13 RKO88140.1 - 0.0063 16.4 0.0 0.0089 15.9 0.0 1.2 1 0 0 1 1 1 1 Serine hydrolase Abhydrolase_5 PF12695.7 RKO88140.1 - 0.015 15.0 0.0 0.022 14.5 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family DUF2048 PF09752.9 RKO88140.1 - 0.036 13.2 0.0 0.055 12.6 0.0 1.2 1 0 0 1 1 1 0 Abhydrolase domain containing 18 DUF915 PF06028.11 RKO88140.1 - 0.039 13.3 0.0 0.051 12.9 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) Abhydrolase_3 PF07859.13 RKO88140.1 - 0.042 13.7 0.0 0.054 13.3 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold PGAP1 PF07819.13 RKO88140.1 - 0.076 12.7 0.0 0.094 12.4 0.0 1.1 1 0 0 1 1 1 0 PGAP1-like protein UPF0227 PF05728.12 RKO88140.1 - 0.14 12.1 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) Abhydrolase_8 PF06259.12 RKO88140.1 - 0.2 11.3 0.0 0.27 10.8 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase DNA_pol_B PF00136.21 RKO88143.1 - 8.1e-14 51.2 1.2 8e-09 34.7 0.1 2.1 1 1 1 2 2 2 2 DNA polymerase family B DDE_Tnp_4 PF13359.6 RKO88143.1 - 0.00014 21.6 0.0 0.00036 20.2 0.0 1.6 1 1 0 1 1 1 1 DDE superfamily endonuclease AIM24 PF01987.17 RKO88146.1 - 2.4e-29 102.6 0.0 2.7e-29 102.4 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 Gag_MA PF01140.19 RKO88146.1 - 0.097 12.4 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 Matrix protein (MA), p15 PAPA-1 PF04795.12 RKO88147.1 - 1.7e-17 64.0 0.8 3.2e-17 63.1 0.8 1.6 1 0 0 1 1 1 1 PAPA-1-like conserved region Spt5_N PF11942.8 RKO88147.1 - 0.11 13.4 7.4 0.04 14.9 4.5 1.8 2 0 0 2 2 2 0 Spt5 transcription elongation factor, acidic N-terminal NARP1 PF12569.8 RKO88147.1 - 1.3 7.9 7.9 1.7 7.5 7.9 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 GILT PF03227.16 RKO88151.1 - 2.6e-10 40.5 0.0 4.3e-10 39.8 0.0 1.4 1 0 0 1 1 1 1 Gamma interferon inducible lysosomal thiol reductase (GILT) IQ PF00612.27 RKO88152.1 - 2.5 8.1 4.5 8.1 6.5 4.5 1.8 1 0 0 1 1 1 0 IQ calmodulin-binding motif PITH PF06201.13 RKO88153.1 - 8.9e-39 133.1 0.0 1.4e-38 132.5 0.0 1.3 1 0 0 1 1 1 1 PITH domain Thioredoxin PF00085.20 RKO88153.1 - 3.2e-21 75.3 0.1 6.2e-21 74.3 0.1 1.5 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 RKO88153.1 - 8.9e-05 22.9 0.2 0.0031 18.0 0.1 2.6 2 1 0 2 2 2 1 Thioredoxin-like domain AhpC-TSA PF00578.21 RKO88153.1 - 0.002 18.0 0.0 0.0038 17.1 0.0 1.5 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_8 PF13905.6 RKO88153.1 - 0.0029 17.9 0.0 0.0052 17.1 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_7 PF13899.6 RKO88153.1 - 0.004 17.3 0.0 0.007 16.5 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Redoxin PF08534.10 RKO88153.1 - 0.032 14.0 0.0 0.054 13.2 0.0 1.4 1 0 0 1 1 1 0 Redoxin FliG_N PF14842.6 RKO88153.1 - 0.051 14.1 0.0 0.083 13.4 0.0 1.3 1 0 0 1 1 1 0 FliG N-terminal domain DUF3453 PF11935.8 RKO88154.1 - 4.8e-41 140.9 0.0 6.7e-40 137.1 0.0 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF3453) Symplekin_C PF12295.8 RKO88154.1 - 3.5e-39 134.8 0.0 2.6e-38 132.0 0.0 2.4 2 0 0 2 2 2 1 Symplekin tight junction protein C terminal K_channel_TID PF07941.11 RKO88154.1 - 0.032 14.7 1.0 0.032 14.7 1.0 3.7 4 0 0 4 4 4 0 Potassium channel Kv1.4 tandem inactivation domain IGFBP PF00219.18 RKO88155.1 - 0.4 11.4 22.1 1 10.1 6.9 4.1 3 1 1 4 4 4 0 Insulin-like growth factor binding protein IGFBP PF00219.18 RKO88156.1 - 0.0038 17.8 10.1 1.7 9.4 0.4 3.3 3 0 0 3 3 3 3 Insulin-like growth factor binding protein Opy2 PF09463.10 RKO88156.1 - 0.64 10.4 4.2 63 4.0 0.0 3.8 3 0 0 3 3 3 0 Opy2 protein AlaDh_PNT_N PF05222.15 RKO88157.1 - 3.4e-29 101.9 0.0 7.4e-29 100.8 0.0 1.6 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, N-terminal domain Sacchrp_dh_C PF16653.5 RKO88157.1 - 1.8e-27 97.1 0.0 3.2e-27 96.3 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase C-terminal domain Sacchrp_dh_NADP PF03435.18 RKO88157.1 - 4.1e-20 72.4 0.1 2.8e-19 69.6 0.2 2.1 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain AlaDh_PNT_C PF01262.21 RKO88157.1 - 1.4e-05 24.5 0.7 0.00026 20.4 0.0 3.0 3 1 0 3 3 3 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_10 PF13460.6 RKO88157.1 - 0.00014 21.8 0.4 0.00023 21.1 0.4 1.4 1 0 0 1 1 1 1 NAD(P)H-binding Shikimate_DH PF01488.20 RKO88157.1 - 0.0038 17.3 0.1 0.01 15.9 0.0 1.7 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase Epimerase PF01370.21 RKO88157.1 - 0.011 15.2 0.0 0.024 14.1 0.0 1.5 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family GST_N PF02798.20 RKO88159.1 - 8.3e-16 58.1 0.0 1e-15 57.8 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 RKO88159.1 - 9.8e-14 51.5 0.0 1.1e-13 51.4 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 RKO88159.1 - 2.5e-11 43.7 0.0 3.1e-11 43.4 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Glyco_hydro_80 PF13647.6 RKO88159.1 - 0.0047 16.5 0.0 0.0054 16.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 80 of chitosanase A F-box-like PF12937.7 RKO88162.1 - 1.2e-05 25.1 1.2 4.5e-05 23.3 1.2 2.1 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO88162.1 - 0.12 12.3 1.5 0.28 11.1 0.2 2.3 2 0 0 2 2 2 0 F-box domain Pyr_redox_2 PF07992.14 RKO88163.1 - 1.3e-62 211.7 6.7 1.6e-62 211.4 6.7 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 RKO88163.1 - 2.3e-34 117.9 0.0 5.6e-34 116.7 0.0 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 RKO88163.1 - 3.7e-19 69.1 7.8 1.9e-17 63.6 0.9 2.7 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 RKO88163.1 - 1.1e-09 38.2 0.3 1.1e-09 38.2 0.3 2.0 2 1 1 3 3 3 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 RKO88163.1 - 2.5e-09 36.8 5.7 1.3e-06 27.9 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 RKO88163.1 - 3e-07 29.9 10.8 1e-06 28.1 4.7 2.7 2 1 0 2 2 2 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 RKO88163.1 - 2.4e-06 26.9 14.3 1.7e-05 24.1 3.5 3.2 2 1 0 3 3 3 2 FAD binding domain NAD_binding_8 PF13450.6 RKO88163.1 - 1.8e-05 24.9 4.0 0.0017 18.5 0.5 2.5 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.6 RKO88163.1 - 3.3e-05 23.2 1.9 0.048 12.8 0.1 2.5 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 RKO88163.1 - 0.00011 21.0 13.2 0.0042 15.8 1.6 4.0 3 1 1 4 4 4 3 HI0933-like protein AlaDh_PNT_C PF01262.21 RKO88163.1 - 0.00037 19.9 6.1 0.017 14.4 0.4 2.8 3 0 0 3 3 3 2 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 RKO88163.1 - 0.007 15.6 2.8 0.021 14.1 0.2 2.3 2 0 0 2 2 2 1 Thi4 family FAD_binding_3 PF01494.19 RKO88163.1 - 0.067 12.4 9.5 0.44 9.7 1.8 2.8 3 0 0 3 3 3 0 FAD binding domain Lycopene_cycl PF05834.12 RKO88163.1 - 5.7 5.9 7.4 1.5 7.8 0.8 2.7 2 1 1 3 3 3 0 Lycopene cyclase protein DUF2304 PF10066.9 RKO88165.1 - 0.016 15.4 0.1 0.024 14.9 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) Herpes_ori_bp PF02399.15 RKO88171.1 - 0.00014 20.1 0.2 0.00026 19.2 0.2 1.3 1 0 0 1 1 1 1 Origin of replication binding protein DUF155 PF02582.14 RKO88171.1 - 0.048 13.7 0.0 0.1 12.7 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised ACR, YagE family COG1723 Ribonuclease_T2 PF00445.18 RKO88173.1 - 3.7e-34 118.5 0.3 4.8e-34 118.2 0.3 1.1 1 0 0 1 1 1 1 Ribonuclease T2 family Kelch_6 PF13964.6 RKO88179.1 - 3e-07 30.5 6.1 0.044 14.1 0.0 5.2 5 0 0 5 5 5 2 Kelch motif Kelch_2 PF07646.15 RKO88179.1 - 0.00012 21.9 2.3 0.26 11.4 0.0 4.4 5 0 0 5 5 5 2 Kelch motif Kelch_4 PF13418.6 RKO88179.1 - 0.00015 21.7 15.7 0.36 10.9 0.2 6.0 6 1 0 6 6 6 2 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO88179.1 - 0.026 14.1 8.1 0.05 13.2 0.0 4.5 5 0 0 5 5 5 0 Kelch motif Kelch_5 PF13854.6 RKO88179.1 - 0.026 14.5 10.1 0.62 10.1 0.1 4.8 5 0 0 5 5 5 0 Kelch motif Kelch_3 PF13415.6 RKO88179.1 - 0.041 14.2 25.1 1.4 9.3 1.3 6.6 4 2 2 6 6 6 0 Galactose oxidase, central domain F-box-like PF12937.7 RKO88183.1 - 0.00044 20.1 1.3 0.00096 19.0 1.3 1.6 1 0 0 1 1 1 1 F-box-like DUF5092 PF17010.5 RKO88185.1 - 6.5e-21 74.9 0.0 1.3e-14 54.4 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF5092) Ncstrn_small PF18266.1 RKO88186.1 - 7.2e-39 133.5 0.0 1.1e-38 132.9 0.0 1.3 1 0 0 1 1 1 1 Nicastrin small lobe Nicastrin PF05450.15 RKO88186.1 - 8.8e-29 100.6 0.4 3.4e-27 95.4 0.4 2.6 1 1 0 1 1 1 1 Nicastrin Peptidase_M28 PF04389.17 RKO88186.1 - 0.0036 17.0 0.0 0.006 16.3 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M28 MFS_1 PF07690.16 RKO88188.1 - 0.0026 16.7 20.2 0.0026 16.7 20.2 2.2 1 1 1 2 2 2 1 Major Facilitator Superfamily DSBA PF01323.20 RKO88189.1 - 1e-17 64.6 0.0 1.3e-17 64.2 0.0 1.1 1 0 0 1 1 1 1 DSBA-like thioredoxin domain PIG-X PF08320.12 RKO88190.1 - 2.5e-14 53.7 0.0 4.6e-14 52.8 0.0 1.4 1 0 0 1 1 1 1 PIG-X / PBN1 Pkinase_Tyr PF07714.17 RKO88191.1 - 2.7e-43 148.1 0.0 3.5e-43 147.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 RKO88191.1 - 9.5e-37 126.8 0.0 1.1e-36 126.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 RKO88191.1 - 7.7e-06 24.9 0.0 9.8e-06 24.6 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 RKO88191.1 - 3.4e-05 23.5 0.0 6.4e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 RKO88191.1 - 9.2e-05 22.5 0.0 0.00023 21.2 0.0 1.8 1 1 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 RKO88191.1 - 0.0018 17.6 0.0 0.0023 17.3 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 RKO88191.1 - 0.0044 16.4 0.0 0.0062 15.9 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 RKO88191.1 - 0.03 13.3 0.0 0.038 12.9 0.0 1.1 1 0 0 1 1 1 0 Haspin like kinase domain YccF PF03733.13 RKO88192.1 - 1.6e-05 25.5 7.1 0.00019 22.0 1.7 2.3 2 0 0 2 2 2 2 Inner membrane component domain DUF1856 PF08983.10 RKO88192.1 - 1.2 9.4 6.0 2.6 8.3 6.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1856) ABC2_membrane_3 PF12698.7 RKO88193.1 - 9.9e-21 74.2 13.2 2.3e-20 73.0 13.2 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein ADPRTs_Tse2 PF18648.1 RKO88195.1 - 0.13 12.3 0.0 2 8.4 0.0 2.2 1 1 1 2 2 2 0 Tse2 ADP-ribosyltransferase toxins TMEM215 PF15746.5 RKO88196.1 - 0.13 11.7 0.2 0.23 10.9 0.2 1.4 1 0 0 1 1 1 0 TMEM215 family Kinesin PF00225.23 RKO88198.1 - 6.8e-45 153.4 0.0 1.2e-44 152.6 0.0 1.4 2 0 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 RKO88198.1 - 1.7e-24 86.5 0.0 3.1e-24 85.6 0.0 1.4 2 0 0 2 2 2 1 Microtubule binding Metallophos PF00149.28 RKO88199.1 - 3.2e-14 53.9 0.2 4.3e-14 53.5 0.2 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase FBPase_2 PF06874.11 RKO88199.1 - 0.0053 15.1 0.1 0.097 10.9 0.0 2.0 2 0 0 2 2 2 2 Firmicute fructose-1,6-bisphosphatase FMN_red PF03358.15 RKO88200.1 - 1.3e-11 44.5 0.0 1.5e-11 44.3 0.0 1.0 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 RKO88200.1 - 6.6e-07 29.2 0.0 8.5e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_1 PF00258.25 RKO88200.1 - 0.057 13.6 0.1 0.56 10.4 0.1 2.0 1 1 0 1 1 1 0 Flavodoxin F-box-like PF12937.7 RKO88201.1 - 0.21 11.5 1.4 0.49 10.3 1.4 1.7 1 0 0 1 1 1 0 F-box-like DEAD PF00270.29 RKO88202.1 - 1.4e-09 38.0 0.0 2.1e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase T2SSE PF00437.20 RKO88202.1 - 0.012 14.6 0.0 0.018 14.1 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein ResIII PF04851.15 RKO88202.1 - 0.064 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Syndecan PF01034.20 RKO88203.1 - 0.046 13.6 0.1 0.081 12.9 0.1 1.3 1 0 0 1 1 1 0 Syndecan domain Herpes_gE PF02480.16 RKO88203.1 - 0.21 10.3 1.2 0.22 10.2 0.0 1.6 2 0 0 2 2 2 0 Alphaherpesvirus glycoprotein E MGC-24 PF05283.11 RKO88203.1 - 0.22 12.0 0.1 0.22 12.0 0.1 3.6 4 0 0 4 4 4 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin Sugar_tr PF00083.24 RKO88204.1 - 2e-54 185.2 18.2 3.5e-54 184.4 18.2 1.3 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 RKO88204.1 - 2.1e-26 92.7 21.5 2.1e-26 92.7 21.5 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily MFS_4 PF06779.14 RKO88204.1 - 3.9e-07 29.7 2.7 3.9e-07 29.7 2.7 1.7 2 0 0 2 2 2 1 Uncharacterised MFS-type transporter YbfB TssO PF17561.2 RKO88204.1 - 0.22 11.6 1.0 2.8 8.0 0.6 2.3 2 0 0 2 2 2 0 Type VI secretion system, TssO Cation_ATPase_N PF00690.26 RKO88205.1 - 0.0018 17.9 0.0 0.0027 17.4 0.0 1.3 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus RT_RNaseH_2 PF17919.1 RKO88208.1 - 7.8e-05 22.6 0.0 0.00014 21.8 0.0 1.4 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase rve PF00665.26 RKO88208.1 - 0.00027 21.1 0.0 0.00048 20.3 0.0 1.4 1 0 0 1 1 1 1 Integrase core domain rve_3 PF13683.6 RKO88208.1 - 0.0095 15.7 0.0 0.021 14.6 0.0 1.6 1 0 0 1 1 1 1 Integrase core domain Bromodomain PF00439.25 RKO88209.1 - 1.4e-36 124.4 2.8 9.3e-20 70.5 0.3 2.4 2 0 0 2 2 2 2 Bromodomain BAH PF01426.18 RKO88209.1 - 6.6e-12 45.4 0.0 1.1e-11 44.7 0.0 1.4 1 0 0 1 1 1 1 BAH domain SMC_N PF02463.19 RKO88211.1 - 8.5e-31 107.1 3.6 2.1e-30 105.8 3.2 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 RKO88211.1 - 4.6e-16 59.9 8.8 7e-16 59.3 8.8 1.3 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 RKO88211.1 - 7.4e-11 42.4 9.1 1.3e-10 41.5 9.1 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 RKO88211.1 - 7.7e-09 35.8 0.1 1.4e-08 35.0 0.1 1.7 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 RKO88211.1 - 1.1e-08 34.7 0.0 2.3e-08 33.7 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_27 PF13514.6 RKO88211.1 - 0.0037 16.9 3.4 0.026 14.1 0.0 2.4 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.27 RKO88211.1 - 0.059 13.9 4.6 0.34 11.4 4.6 2.2 1 1 0 1 1 1 0 ABC transporter DUF2813 PF11398.8 RKO88211.1 - 0.082 12.2 0.0 0.082 12.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) DUF349 PF03993.12 RKO88211.1 - 2.8 8.3 11.6 3.5 8.0 8.3 2.4 2 0 0 2 2 2 0 Domain of Unknown Function (DUF349) Leo1 PF04004.13 RKO88212.1 - 2e-33 115.5 0.3 2e-33 115.5 0.3 2.8 3 1 0 3 3 3 1 Leo1-like protein ALG11_N PF15924.5 RKO88213.1 - 2.9e-85 285.6 0.2 4.1e-85 285.1 0.2 1.2 1 0 0 1 1 1 1 ALG11 mannosyltransferase N-terminus Glycos_transf_1 PF00534.20 RKO88213.1 - 7.6e-24 84.2 0.0 1.1e-23 83.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 RKO88213.1 - 1.9e-14 54.2 0.0 3.1e-14 53.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 RKO88213.1 - 0.0042 17.1 0.1 0.0078 16.2 0.1 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 RKO88213.1 - 0.017 15.5 0.0 0.045 14.2 0.0 1.8 1 0 0 1 1 1 0 Glycosyl transferases group 1 DUF4149 PF13664.6 RKO88214.1 - 7.3e-19 68.0 1.2 7.3e-19 68.0 1.2 2.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4149) PRMT5 PF05185.16 RKO88215.1 - 1.3e-72 243.2 0.0 1.9e-72 242.7 0.0 1.2 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase PRMT5_TIM PF17285.2 RKO88215.1 - 6.2e-45 153.4 0.0 8.4e-45 153.0 0.0 1.2 1 0 0 1 1 1 1 PRMT5 TIM barrel domain PRMT5_C PF17286.2 RKO88215.1 - 1.2e-22 80.7 0.1 1.7e-22 80.1 0.1 1.3 1 0 0 1 1 1 1 PRMT5 oligomerisation domain Methyltransf_25 PF13649.6 RKO88215.1 - 2.9e-05 24.7 0.0 5.8e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO88215.1 - 0.0011 18.8 0.0 0.0018 18.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 RKO88215.1 - 0.032 14.0 0.0 0.047 13.4 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein Sel_put PF04328.13 RKO88215.1 - 0.45 10.6 2.8 3.3 7.8 0.0 3.3 3 0 0 3 3 3 0 Selenoprotein, putative Sec1 PF00995.23 RKO88216.1 - 8.7e-116 388.4 0.0 1.1e-115 388.1 0.0 1.0 1 0 0 1 1 1 1 Sec1 family Herpes_UL56 PF04534.12 RKO88217.1 - 0.21 11.1 5.4 0.36 10.3 5.4 1.3 1 0 0 1 1 1 0 Herpesvirus UL56 protein DRMBL PF07522.14 RKO88219.1 - 1.7e-23 82.9 0.0 2.3e-23 82.5 0.0 1.1 1 0 0 1 1 1 1 DNA repair metallo-beta-lactamase CLU PF13236.6 RKO88221.1 - 4.6e-77 258.8 0.0 6.9e-77 258.2 0.0 1.3 1 0 0 1 1 1 1 Clustered mitochondria CLU_N PF15044.6 RKO88221.1 - 6.4e-18 64.9 0.0 1.5e-17 63.7 0.0 1.7 1 0 0 1 1 1 1 Mitochondrial function, CLU-N-term DUF727 PF05303.12 RKO88221.1 - 0.0033 17.5 0.0 0.013 15.6 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF727) CBM_1 PF00734.18 RKO88223.1 - 0.078 13.0 5.1 1.1 9.3 0.8 2.4 2 0 0 2 2 2 0 Fungal cellulose binding domain CclA_1 PF16942.5 RKO88223.1 - 0.94 9.8 3.8 0.45 10.8 0.5 1.9 2 0 0 2 2 2 0 Putative cyclic bacteriocin IGFBP PF00219.18 RKO88223.1 - 7.3 7.3 8.2 5.9 7.6 0.4 2.4 2 1 0 2 2 2 0 Insulin-like growth factor binding protein Pkinase PF00069.25 RKO88225.1 - 6.9e-23 81.4 0.0 1.1e-22 80.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain HR1 PF02185.16 RKO88225.1 - 5.4e-20 71.3 4.5 2.3e-11 43.6 1.7 2.5 2 0 0 2 2 2 2 Hr1 repeat C1_1 PF00130.22 RKO88225.1 - 2e-19 69.2 23.5 7.1e-12 45.0 7.3 2.4 2 0 0 2 2 2 2 Phorbol esters/diacylglycerol binding domain (C1 domain) Pkinase_Tyr PF07714.17 RKO88225.1 - 3.6e-12 46.1 0.0 5.6e-12 45.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase C1_2 PF03107.16 RKO88225.1 - 2.6e-05 24.5 13.1 0.0073 16.6 4.8 2.6 2 0 0 2 2 2 2 C1 domain Uds1 PF15456.6 RKO88225.1 - 8.6e-05 22.7 4.3 0.22 11.7 0.2 3.0 2 0 0 2 2 2 2 Up-regulated During Septation Prok-RING_1 PF14446.6 RKO88225.1 - 0.2 11.6 15.4 1.6 8.7 3.6 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Zf_RING PF16744.5 RKO88225.1 - 0.94 9.6 10.3 0.24 11.5 1.5 2.6 2 0 0 2 2 2 0 KIAA1045 RING finger PHD PF00628.29 RKO88225.1 - 1.7 8.6 19.0 2.7 8.0 5.7 2.5 2 0 0 2 2 2 0 PHD-finger DZR PF12773.7 RKO88225.1 - 2.1 8.4 15.7 0.28 11.2 3.1 2.5 2 0 0 2 2 2 0 Double zinc ribbon zf-RING-like PF08746.11 RKO88225.1 - 8.3 6.8 22.7 3.2 8.1 8.0 2.5 2 0 0 2 2 2 0 RING-like domain Pkinase_C PF00433.24 RKO88226.1 - 2.5e-11 44.1 1.6 3.5e-11 43.6 1.6 1.2 1 0 0 1 1 1 1 Protein kinase C terminal domain NTP_transf_3 PF12804.7 RKO88228.1 - 9.6e-11 42.3 0.1 1.2e-10 42.0 0.1 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 RKO88228.1 - 1.7e-08 34.4 0.0 4.5e-08 33.0 0.0 1.7 1 1 0 1 1 1 1 Nucleotidyl transferase SH3_9 PF14604.6 RKO88229.1 - 8.6e-09 35.1 0.0 1.8e-08 34.1 0.0 1.6 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO88229.1 - 7.3e-05 22.3 0.0 0.00013 21.5 0.0 1.4 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 RKO88229.1 - 0.0013 18.3 0.0 0.0028 17.3 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain PRIMA1 PF16101.5 RKO88229.1 - 0.026 14.6 0.1 0.074 13.1 0.1 1.7 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 EphA2_TM PF14575.6 RKO88229.1 - 0.065 14.1 0.0 0.12 13.3 0.0 1.4 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain TMEM154 PF15102.6 RKO88229.1 - 0.11 12.3 0.1 0.21 11.5 0.1 1.3 1 0 0 1 1 1 0 TMEM154 protein family DUF1891 PF09004.10 RKO88229.1 - 0.46 10.1 0.1 0.46 10.1 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1891) peroxidase PF00141.23 RKO88230.1 - 1.2e-15 57.8 0.0 2e-15 57.1 0.0 1.3 1 0 0 1 1 1 1 Peroxidase Wzy_C PF04932.15 RKO88232.1 - 0.071 12.7 0.0 0.081 12.6 0.0 1.1 1 0 0 1 1 1 0 O-Antigen ligase TIG PF01833.24 RKO88233.1 - 1.9e-07 31.0 0.0 3e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 IPT/TIG domain Branch_AA_trans PF05525.13 RKO88233.1 - 0.11 11.4 0.0 0.2 10.5 0.0 1.4 2 0 0 2 2 2 0 Branched-chain amino acid transport protein Lipase_3 PF01764.25 RKO88236.1 - 2.7e-26 92.1 0.1 6e-26 91.0 0.0 1.5 2 0 0 2 2 2 1 Lipase (class 3) PGAP1 PF07819.13 RKO88236.1 - 5.8e-05 22.9 0.0 0.0001 22.1 0.0 1.3 1 0 0 1 1 1 1 PGAP1-like protein Abhydrolase_6 PF12697.7 RKO88236.1 - 0.0052 17.4 2.1 0.01 16.4 0.4 2.0 1 1 0 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 RKO88236.1 - 0.0068 15.7 0.0 0.013 14.8 0.0 1.4 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 RKO88236.1 - 0.024 14.3 0.0 0.037 13.7 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold DUF2974 PF11187.8 RKO88236.1 - 0.066 12.8 0.1 0.28 10.7 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2974) RNA12 PF10443.9 RKO88238.1 - 6.1e-25 87.9 0.0 8.2e-25 87.4 0.0 1.2 1 0 0 1 1 1 1 RNA12 protein Peptidase_M28 PF04389.17 RKO88239.1 - 2.6e-31 108.9 0.1 3.9e-31 108.3 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M28 Peptidase_M42 PF05343.14 RKO88239.1 - 0.054 12.5 0.0 0.096 11.7 0.0 1.3 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase CHRD PF07452.12 RKO88242.1 - 3.8e-16 60.1 0.0 5.1e-16 59.7 0.0 1.2 1 0 0 1 1 1 1 CHRD domain DUF3982 PF13138.6 RKO88243.1 - 0.17 11.7 0.2 0.32 10.8 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3982) ATP-synt PF00231.19 RKO88244.1 - 2.8e-64 217.5 2.5 3.1e-64 217.4 2.5 1.0 1 0 0 1 1 1 1 ATP synthase UDPG_MGDP_dh_N PF03721.14 RKO88245.1 - 0.14 11.7 0.0 0.27 10.8 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pkinase PF00069.25 RKO88247.1 - 1e-74 251.2 0.0 2.3e-74 250.1 0.0 1.5 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO88247.1 - 9.1e-33 113.6 0.0 1.2e-23 83.8 0.0 2.0 2 0 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 RKO88247.1 - 4e-09 36.2 0.4 0.018 14.4 0.0 3.1 2 1 1 3 3 3 3 Kinase-like APH PF01636.23 RKO88247.1 - 0.00043 20.3 0.0 0.084 12.8 0.0 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family Haspin_kinase PF12330.8 RKO88247.1 - 0.018 14.0 0.2 0.2 10.5 0.0 2.1 2 0 0 2 2 2 0 Haspin like kinase domain Pkinase_fungal PF17667.1 RKO88247.1 - 0.021 13.6 0.0 0.036 12.9 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase Kdo PF06293.14 RKO88247.1 - 0.12 11.7 0.0 0.19 11.1 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family LRR_4 PF12799.7 RKO88248.1 - 5.2e-05 23.5 0.1 0.51 10.8 0.5 3.6 3 1 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 RKO88248.1 - 0.75 10.0 8.3 13 6.2 0.0 4.8 5 0 0 5 5 5 0 Leucine Rich repeat UCH PF00443.29 RKO88249.1 - 4e-51 174.0 0.0 5e-51 173.7 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 RKO88249.1 - 5.7e-12 45.9 0.1 3.2e-11 43.4 0.1 2.1 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase ubiquitin PF00240.23 RKO88249.1 - 3.9e-07 29.7 0.1 5.3e-06 26.1 0.0 2.3 2 0 0 2 2 2 1 Ubiquitin family SidE PF12252.8 RKO88249.1 - 0.038 11.5 0.0 0.056 11.0 0.0 1.1 1 0 0 1 1 1 0 Dot/Icm substrate protein Peptidase_C98 PF15499.6 RKO88249.1 - 0.094 12.2 0.0 0.22 11.0 0.0 1.6 1 0 0 1 1 1 0 Ubiquitin-specific peptidase-like, SUMO isopeptidase Tantalus PF15386.6 RKO88250.1 - 0.076 13.1 0.1 0.21 11.7 0.1 1.7 1 0 0 1 1 1 0 Drosophila Tantalus-like F-box-like PF12937.7 RKO88255.1 - 4.1e-09 36.2 0.7 8.5e-09 35.2 0.7 1.6 1 0 0 1 1 1 1 F-box-like LRR_6 PF13516.6 RKO88255.1 - 1.1e-06 28.2 6.8 0.42 10.8 0.0 5.4 5 0 0 5 5 5 3 Leucine Rich repeat LRR_4 PF12799.7 RKO88255.1 - 4e-06 27.1 0.4 0.0073 16.7 0.0 3.3 1 1 4 5 5 5 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO88255.1 - 0.049 13.4 0.5 0.74 9.6 0.1 2.9 4 0 0 4 4 4 0 Leucine rich repeat AT_hook PF02178.19 RKO88257.1 - 0.39 10.7 13.6 0.33 11.0 3.7 3.9 2 0 0 2 2 2 0 AT hook motif CDC27 PF09507.10 RKO88258.1 - 8.3e-13 48.5 59.2 2.7e-10 40.2 59.2 3.3 1 1 0 1 1 1 1 DNA polymerase subunit Cdc27 Atg14 PF10186.9 RKO88258.1 - 0.92 8.5 12.8 1.6 7.7 12.8 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF1682 PF07946.14 RKO88258.1 - 6.9 5.8 17.6 16 4.6 17.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) Galactosyl_T PF01762.21 RKO88259.1 - 3.5e-06 27.0 0.0 0.2 11.5 0.0 3.1 3 0 0 3 3 3 3 Galactosyltransferase DUF5632 PF18646.1 RKO88261.1 - 0.092 12.8 0.1 0.82 9.8 0.0 2.6 3 0 0 3 3 3 0 Family of unknown function (DUF5632) DHHC PF01529.20 RKO88262.1 - 2.6e-39 134.4 7.8 2.6e-39 134.4 7.8 1.7 2 0 0 2 2 2 1 DHHC palmitoyltransferase Sensor PF13796.6 RKO88262.1 - 0.14 12.2 0.2 0.14 12.2 0.2 2.6 3 0 0 3 3 3 0 Putative sensor zf-RING_2 PF13639.6 RKO88264.1 - 7.3e-12 45.4 9.1 6.2e-11 42.5 9.1 2.0 1 1 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 RKO88264.1 - 8.2e-11 42.0 4.5 1.1e-10 41.6 4.5 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 RKO88264.1 - 2.9e-08 33.6 1.1 3.9e-08 33.2 1.1 1.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 RKO88264.1 - 7.3e-08 32.3 3.8 1.3e-07 31.5 3.8 1.4 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 RKO88264.1 - 5e-07 29.6 3.2 7.3e-07 29.0 3.2 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 RKO88264.1 - 6.3e-07 29.1 8.3 2.4e-06 27.3 4.2 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 RKO88264.1 - 7.2e-07 28.8 3.0 0.0002 21.0 0.9 2.4 2 0 0 2 2 2 2 RING-like zinc finger zf-C3HC4 PF00097.25 RKO88264.1 - 3e-06 27.0 7.2 5.3e-06 26.2 6.1 1.8 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) FANCL_C PF11793.8 RKO88264.1 - 0.00074 19.7 6.0 0.016 15.4 6.0 2.3 1 1 0 1 1 1 1 FANCL C-terminal domain Prok-RING_4 PF14447.6 RKO88264.1 - 0.00091 19.0 2.9 0.00091 19.0 2.9 2.0 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 RKO88264.1 - 0.001 18.9 7.9 0.0063 16.4 7.6 2.0 1 1 1 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 RKO88264.1 - 0.0046 16.7 4.4 0.027 14.2 4.5 1.9 1 1 1 2 2 2 1 RING/Ubox like zinc-binding domain Zn_ribbon_17 PF17120.5 RKO88264.1 - 0.0057 16.3 2.7 0.0057 16.3 2.7 1.7 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type RINGv PF12906.7 RKO88264.1 - 0.04 14.0 3.2 0.04 14.0 3.2 2.2 2 1 0 2 2 2 0 RING-variant domain Helicase_C PF00271.31 RKO88265.1 - 2e-10 41.0 0.0 2.7e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HDA2-3 PF11496.8 RKO88266.1 - 1.5e-06 27.6 0.0 1.7e-06 27.4 0.0 1.0 1 0 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 HR1 PF02185.16 RKO88266.1 - 0.015 15.4 0.0 0.021 14.9 0.0 1.2 1 0 0 1 1 1 0 Hr1 repeat OrfB_Zn_ribbon PF07282.11 RKO88267.1 - 0.0044 16.9 0.1 0.01 15.8 0.1 1.6 2 0 0 2 2 2 1 Putative transposase DNA-binding domain CENP-B_dimeris PF09026.10 RKO88268.1 - 0.0042 17.4 6.2 0.01 16.2 6.2 1.6 1 0 0 1 1 1 1 Centromere protein B dimerisation domain NOA36 PF06524.12 RKO88268.1 - 1.5 8.1 8.8 2.5 7.4 8.8 1.3 1 0 0 1 1 1 0 NOA36 protein DNA_pol_phi PF04931.13 RKO88268.1 - 3.9 5.5 7.5 1.1 7.2 4.3 1.6 2 0 0 2 2 2 0 DNA polymerase phi S1 PF00575.23 RKO88270.1 - 2.9e-13 50.0 17.0 0.0002 21.6 0.0 5.2 5 1 0 5 5 5 4 S1 RNA binding domain TPR_14 PF13428.6 RKO88271.1 - 6.7e-09 35.8 1.0 0.0062 17.3 0.0 4.7 4 1 1 5 5 5 2 Tetratricopeptide repeat NRDE-2 PF08424.10 RKO88271.1 - 5.5e-06 25.7 9.0 0.0095 15.1 2.1 2.2 1 1 1 2 2 2 2 NRDE-2, necessary for RNA interference TPR_16 PF13432.6 RKO88271.1 - 7.6e-06 26.5 1.6 8.5e-05 23.1 0.1 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat Suf PF05843.14 RKO88271.1 - 2.5e-05 24.4 7.9 0.011 15.7 0.1 2.6 2 1 1 3 3 3 2 Suppressor of forked protein (Suf) TPR_19 PF14559.6 RKO88271.1 - 6.2e-05 23.4 0.2 0.82 10.2 0.0 3.6 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 RKO88271.1 - 0.0022 17.9 2.7 0.54 10.5 0.0 3.8 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO88271.1 - 0.0073 16.9 5.2 11 7.0 0.1 4.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 RKO88271.1 - 0.079 13.3 3.2 3 8.2 0.0 3.4 2 1 0 3 3 3 0 Tetratricopeptide repeat TPR_7 PF13176.6 RKO88271.1 - 0.24 11.5 4.3 1.8 8.8 0.1 3.9 4 1 0 4 4 4 0 Tetratricopeptide repeat DUF4246 PF14033.6 RKO88272.1 - 9.3e-23 81.0 0.0 4.1e-19 69.0 0.0 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF4246) HMGL-like PF00682.19 RKO88273.1 - 0.00078 19.1 0.0 0.00098 18.8 0.0 1.1 1 0 0 1 1 1 1 HMGL-like DUF5560 PF17715.1 RKO88273.1 - 0.017 14.6 3.0 0.022 14.2 3.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5560) Cyclin PF08613.11 RKO88277.1 - 2.8e-09 37.5 0.0 3.6e-09 37.2 0.0 1.1 1 0 0 1 1 1 1 Cyclin CAP_GLY PF01302.25 RKO88278.1 - 5.4e-25 87.2 0.6 5.8e-25 87.1 0.6 1.0 1 0 0 1 1 1 1 CAP-Gly domain Filament PF00038.21 RKO88279.1 - 0.00054 19.7 39.5 0.056 13.0 16.1 2.2 2 0 0 2 2 2 2 Intermediate filament protein Phage_GP20 PF06810.11 RKO88279.1 - 0.013 15.3 14.4 0.013 15.3 14.4 3.8 2 2 2 4 4 4 0 Phage minor structural protein GP20 T3SSipB PF16535.5 RKO88279.1 - 0.054 14.0 16.2 3.5 8.1 7.8 3.4 1 1 1 2 2 2 0 Type III cell invasion protein SipB TPR_14 PF13428.6 RKO88279.1 - 0.13 13.2 3.0 28 5.9 0.1 4.3 2 1 1 3 3 3 0 Tetratricopeptide repeat Flu_NS2 PF00601.19 RKO88279.1 - 0.48 10.7 4.7 0.19 12.0 0.5 2.6 2 2 0 2 2 2 0 Influenza non-structural protein (NS2) Baculo_PEP_C PF04513.12 RKO88279.1 - 0.5 10.4 10.7 0.64 10.1 3.9 3.3 2 2 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4407 PF14362.6 RKO88279.1 - 0.57 9.5 23.3 0.071 12.5 10.1 2.9 1 1 1 3 3 3 0 Domain of unknown function (DUF4407) CENP-F_leu_zip PF10473.9 RKO88279.1 - 0.68 9.9 53.3 0.066 13.2 13.0 3.8 2 2 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Fez1 PF06818.15 RKO88279.1 - 1.5 9.2 35.1 5.6 7.4 13.8 3.3 1 1 2 3 3 3 0 Fez1 DUF1664 PF07889.12 RKO88279.1 - 3 7.9 18.3 7.7 6.6 0.5 3.9 2 2 2 4 4 4 0 Protein of unknown function (DUF1664) GAS PF13851.6 RKO88279.1 - 3.1 7.1 41.7 5.2 6.4 17.9 3.1 2 2 0 2 2 2 0 Growth-arrest specific micro-tubule binding NPV_P10 PF05531.12 RKO88279.1 - 4.1 7.9 17.6 8.5 6.9 0.6 5.3 2 2 3 5 5 5 0 Nucleopolyhedrovirus P10 protein Spc7 PF08317.11 RKO88279.1 - 5.3 5.8 48.6 0.13 11.1 7.0 3.9 2 2 2 4 4 4 0 Spc7 kinetochore protein DIRP PF06584.13 RKO88279.1 - 9.8 6.4 8.2 11 6.3 0.8 3.2 2 2 0 2 2 2 0 DIRP AAA PF00004.29 RKO88280.1 - 6.6e-17 62.2 0.4 1.8e-16 60.8 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Vfa1 PF08432.10 RKO88280.1 - 8.3 6.7 9.9 17 5.7 9.9 1.5 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 F-box-like PF12937.7 RKO88281.1 - 0.034 14.0 0.1 0.08 12.9 0.1 1.7 1 0 0 1 1 1 0 F-box-like Mito_carr PF00153.27 RKO88282.1 - 1.1e-25 89.4 0.4 9e-15 54.4 0.2 2.1 2 0 0 2 2 2 2 Mitochondrial carrier protein Trp_oprn_chp PF09534.10 RKO88284.1 - 0.011 15.5 0.0 0.019 14.8 0.0 1.3 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF1970 PF09301.10 RKO88284.1 - 0.62 10.3 3.1 0.32 11.3 0.3 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1970) DUF98 PF01947.16 RKO88285.1 - 0.0098 15.9 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 p-hydroxybenzoic acid synthase LEAP-2 PF07359.11 RKO88285.1 - 0.068 13.0 0.3 3 7.8 0.0 2.5 2 1 1 3 3 3 0 Liver-expressed antimicrobial peptide 2 precursor (LEAP-2) U5_2-snRNA_bdg PF10597.9 RKO88285.1 - 0.15 12.2 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 U5-snRNA binding site 2 of PrP8 SH3_9 PF14604.6 RKO88288.1 - 0.00028 20.7 0.0 0.00043 20.1 0.0 1.3 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO88288.1 - 0.034 13.8 0.0 0.045 13.4 0.0 1.2 1 0 0 1 1 1 0 SH3 domain Syja_N PF02383.18 RKO88290.1 - 1e-14 54.6 0.0 1.4e-14 54.2 0.0 1.2 1 0 0 1 1 1 1 SacI homology domain G_glu_transpept PF01019.21 RKO88291.1 - 9.7e-76 255.6 0.1 1.1e-75 255.4 0.1 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase FA_desaturase PF00487.24 RKO88292.1 - 0.26 11.1 13.6 0.061 13.1 9.9 1.6 1 1 1 2 2 2 0 Fatty acid desaturase peroxidase PF00141.23 RKO88293.1 - 1.4e-17 64.1 0.1 1.4e-11 44.5 0.0 2.2 2 0 0 2 2 2 2 Peroxidase AbiJ_NTD3 PF18860.1 RKO88293.1 - 0.047 13.2 0.0 0.092 12.3 0.0 1.4 1 0 0 1 1 1 0 AbiJ N-terminal domain 3 Radial_spoke PF04712.12 RKO88294.1 - 4.5e-14 52.3 0.0 6.2e-14 51.8 0.0 1.2 1 0 0 1 1 1 1 Radial spokehead-like protein DUF4749 PF15936.5 RKO88294.1 - 0.0071 17.4 0.1 17 6.6 0.0 3.4 3 1 0 3 3 3 1 Domain of unknown function (DUF4749) CCDC53 PF10152.9 RKO88294.1 - 0.52 10.7 2.1 0.91 9.9 2.1 1.4 1 0 0 1 1 1 0 Subunit CCDC53 of WASH complex Nckap1 PF09735.9 RKO88295.1 - 2.1e-20 72.4 0.0 3.1e-13 48.7 0.0 2.9 2 1 1 3 3 3 3 Membrane-associated apoptosis protein PPR_2 PF13041.6 RKO88296.1 - 9.6e-13 48.1 0.0 9.7e-07 28.9 0.0 4.0 4 0 0 4 4 4 2 PPR repeat family PPR_3 PF13812.6 RKO88296.1 - 3.5e-08 33.4 0.0 0.00018 21.5 0.0 4.0 3 1 1 4 4 4 1 Pentatricopeptide repeat domain Ribonuclease_T2 PF00445.18 RKO88296.1 - 0.028 14.6 0.0 0.049 13.9 0.0 1.3 1 0 0 1 1 1 0 Ribonuclease T2 family PPR_1 PF12854.7 RKO88296.1 - 0.069 12.9 0.0 4.3 7.1 0.0 3.3 3 0 0 3 3 3 0 PPR repeat Ank_2 PF12796.7 RKO88297.1 - 2.1e-31 108.4 0.0 3.8e-16 59.4 0.1 3.9 2 1 2 4 4 4 3 Ankyrin repeats (3 copies) GDPD PF03009.17 RKO88297.1 - 5e-26 92.0 0.0 1.6e-25 90.3 0.0 1.8 2 0 0 2 2 2 1 Glycerophosphoryl diester phosphodiesterase family Ank_4 PF13637.6 RKO88297.1 - 8.7e-26 90.0 10.2 3.2e-08 34.0 0.0 6.0 3 2 4 7 7 7 5 Ankyrin repeats (many copies) Ank PF00023.30 RKO88297.1 - 1.8e-19 69.2 8.2 0.00062 20.1 0.3 5.9 5 0 0 5 5 5 5 Ankyrin repeat SPX PF03105.19 RKO88297.1 - 1.9e-19 70.9 20.3 9e-11 42.3 1.4 3.5 2 1 2 4 4 4 3 SPX domain Ank_5 PF13857.6 RKO88297.1 - 2.4e-15 56.4 2.3 8.3e-06 26.0 0.0 5.0 2 2 1 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO88297.1 - 3.1e-15 54.8 0.9 0.044 14.3 0.0 6.6 6 0 0 6 6 6 4 Ankyrin repeat MRP-S27 PF10037.9 RKO88297.1 - 0.016 14.1 1.4 0.029 13.2 1.4 1.4 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S27 ABC_tran PF00005.27 RKO88298.1 - 3.8e-28 98.7 0.0 1.1e-27 97.2 0.0 1.8 1 1 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 RKO88298.1 - 1.7e-12 47.6 12.5 1.9e-12 47.5 9.0 2.1 2 0 0 2 2 2 1 ABC transporter transmembrane region T2SSE PF00437.20 RKO88298.1 - 0.027 13.5 0.0 0.046 12.8 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_29 PF13555.6 RKO88298.1 - 0.076 12.8 0.1 0.18 11.6 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 RKO88298.1 - 0.11 12.6 0.0 0.24 11.5 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase RFX1_trans_act PF04589.13 RKO88298.1 - 3.4 7.8 6.0 21 5.3 0.8 2.7 2 0 0 2 2 2 0 RFX1 transcription activation region TPR_1 PF00515.28 RKO88300.1 - 0.042 13.7 0.2 0.089 12.7 0.2 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_2 PF07719.17 RKO88300.1 - 0.052 13.7 0.2 0.12 12.6 0.2 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat F-box-like PF12937.7 RKO88301.1 - 3.8e-05 23.5 0.1 7.4e-05 22.6 0.1 1.4 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO88301.1 - 5.5e-05 22.9 0.7 0.00011 22.0 0.7 1.6 1 0 0 1 1 1 1 F-box domain DUF1611 PF07755.11 RKO88301.1 - 0.095 12.0 0.0 0.16 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain AAA_lid_3 PF17862.1 RKO88302.1 - 1.2e-12 47.4 0.0 1.6e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 AAA+ lid domain Pmp3 PF01679.17 RKO88304.1 - 9.3e-19 67.4 3.8 1.2e-18 67.1 3.8 1.1 1 0 0 1 1 1 1 Proteolipid membrane potential modulator Pmp3 PF01679.17 RKO88305.1 - 9.1e-21 73.8 7.1 1.1e-20 73.5 7.1 1.0 1 0 0 1 1 1 1 Proteolipid membrane potential modulator PseudoU_synth_1 PF01416.20 RKO88306.1 - 1.9e-05 25.1 0.0 5.4e-05 23.6 0.0 1.8 1 0 0 1 1 1 1 tRNA pseudouridine synthase DUF2093 PF09866.9 RKO88307.1 - 0.15 11.5 0.0 0.25 10.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2093) Acetyltransf_1 PF00583.25 RKO88308.1 - 1.3e-07 31.8 0.1 2.1e-07 31.2 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 RKO88308.1 - 5.6e-06 26.3 0.4 1.1e-05 25.3 0.4 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 RKO88308.1 - 8.5e-05 22.9 0.3 0.00015 22.1 0.3 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 RKO88308.1 - 0.045 13.9 0.1 0.14 12.3 0.1 2.1 2 1 0 2 2 2 0 GCN5-related N-acetyl-transferase FR47 PF08445.10 RKO88308.1 - 0.13 12.3 0.0 0.28 11.2 0.0 1.7 1 0 0 1 1 1 0 FR47-like protein E1-E2_ATPase PF00122.20 RKO88309.1 - 2.1e-25 89.3 0.7 2.1e-25 89.3 0.7 2.0 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 RKO88309.1 - 9.7e-16 57.2 0.0 2e-15 56.2 0.0 1.5 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus SEO_C PF14577.6 RKO88310.1 - 0.013 15.0 0.0 0.02 14.4 0.0 1.3 1 1 0 1 1 1 0 Sieve element occlusion C-terminus PH PF00169.29 RKO88311.1 - 5.7e-13 49.3 0.1 5.2e-12 46.2 0.0 2.2 1 1 1 2 2 2 1 PH domain GRAM PF02893.20 RKO88311.1 - 1.7e-08 34.4 0.0 3.3e-05 23.7 0.0 2.2 2 0 0 2 2 2 2 GRAM domain PH_11 PF15413.6 RKO88311.1 - 0.002 18.5 0.5 0.13 12.7 0.5 2.4 1 1 0 1 1 1 1 Pleckstrin homology domain PH_6 PF15406.6 RKO88311.1 - 0.032 14.5 0.0 0.075 13.3 0.0 1.6 1 0 0 1 1 1 0 Pleckstrin homology domain SPX PF03105.19 RKO88311.1 - 6.5 6.6 6.6 38 4.0 5.1 2.0 2 0 0 2 2 2 0 SPX domain PALP PF00291.25 RKO88313.1 - 4.8e-76 256.0 2.4 7.3e-39 133.9 0.4 2.1 2 0 0 2 2 2 2 Pyridoxal-phosphate dependent enzyme Thr_dehydrat_C PF00585.18 RKO88313.1 - 0.05 13.4 0.0 0.085 12.6 0.0 1.4 1 0 0 1 1 1 0 C-terminal regulatory domain of Threonine dehydratase DUF2740 PF10872.8 RKO88315.1 - 0.053 13.4 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2740) Pkinase PF00069.25 RKO88315.1 - 0.084 12.2 0.0 0.12 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein kinase domain Sporozoite_P67 PF05642.11 RKO88316.1 - 0.32 9.0 11.1 0.45 8.6 11.1 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen zf-MYND PF01753.18 RKO88320.1 - 1.1e-15 57.4 36.7 3.1e-08 33.6 18.3 2.6 2 0 0 2 2 2 2 MYND finger TPR_MalT PF17874.1 RKO88320.1 - 0.015 14.7 0.2 1.7 8.0 0.0 2.1 2 0 0 2 2 2 0 MalT-like TPR region TPR_2 PF07719.17 RKO88320.1 - 0.022 14.9 1.2 6.7 7.1 0.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 RKO88320.1 - 0.11 12.9 3.2 2.3 8.5 0.2 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 RKO88320.1 - 0.23 11.6 2.2 5.9 7.2 0.1 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.6 RKO88320.1 - 0.4 10.6 3.9 8.1 6.5 0.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO88320.1 - 0.49 11.4 5.5 1.5 9.8 0.1 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat Sar8_2 PF03058.14 RKO88320.1 - 2.6 8.6 6.0 9.7 6.8 0.1 2.5 2 0 0 2 2 2 0 Sar8.2 family Beta-lactamase PF00144.24 RKO88325.1 - 1.1e-53 182.6 0.8 1.6e-53 182.1 0.8 1.1 1 0 0 1 1 1 1 Beta-lactamase DUF3471 PF11954.8 RKO88325.1 - 9.7e-12 45.3 0.0 2.1e-11 44.2 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3471) Peptidase_S11 PF00768.20 RKO88325.1 - 0.16 11.3 0.0 0.28 10.6 0.0 1.3 1 0 0 1 1 1 0 D-alanyl-D-alanine carboxypeptidase OmpH PF03938.14 RKO88326.1 - 0.013 15.9 1.7 0.019 15.3 1.7 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Fic PF02661.18 RKO88327.1 - 2.7e-14 53.8 0.0 5.5e-14 52.8 0.0 1.5 1 0 0 1 1 1 1 Fic/DOC family ABC_membrane PF00664.23 RKO88327.1 - 0.12 12.0 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 ABC transporter transmembrane region EGF_2 PF07974.13 RKO88329.1 - 0.00012 22.4 9.9 0.00028 21.2 9.9 1.7 1 0 0 1 1 1 1 EGF-like domain SBP_bac_1 PF01547.25 RKO88329.1 - 0.0036 17.3 2.3 0.009 16.0 2.3 1.6 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 RKO88329.1 - 0.0067 16.3 0.6 0.012 15.4 0.6 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein EB PF01683.18 RKO88329.1 - 0.043 14.1 0.9 0.088 13.1 0.9 1.4 1 0 0 1 1 1 0 EB module EGF_Tenascin PF18720.1 RKO88329.1 - 0.15 12.2 12.4 0.45 10.6 12.4 1.8 1 0 0 1 1 1 0 Tenascin EGF domain EGF PF00008.27 RKO88329.1 - 0.32 11.4 4.0 0.69 10.3 4.0 1.6 1 0 0 1 1 1 0 EGF-like domain MTABC_N PF16185.5 RKO88329.1 - 6 6.3 6.8 1.3 8.4 2.0 2.2 2 1 0 2 2 2 0 Mitochondrial ABC-transporter N-terminal five TM region HLH PF00010.26 RKO88330.1 - 1.5e-12 47.3 0.1 3.8e-12 46.0 0.0 1.7 2 0 0 2 2 2 1 Helix-loop-helix DNA-binding domain DivIC PF04977.15 RKO88330.1 - 0.13 12.0 0.3 0.41 10.4 0.0 1.8 2 0 0 2 2 2 0 Septum formation initiator TFIIA PF03153.13 RKO88330.1 - 3.8 7.4 7.8 4.7 7.1 7.8 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit PARP_reg PF02877.14 RKO88331.1 - 1.7e-40 138.2 0.2 2.8e-40 137.5 0.2 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase, regulatory domain PARP PF00644.20 RKO88331.1 - 5.7e-29 101.1 0.1 3.2e-27 95.4 0.0 2.6 2 1 1 3 3 3 2 Poly(ADP-ribose) polymerase catalytic domain MALT1_Ig PF18703.1 RKO88331.1 - 0.057 13.4 0.3 12 5.9 0.1 2.1 2 0 0 2 2 2 0 MALT1 Ig-like domain DUF4246 PF14033.6 RKO88332.1 - 2.4e-35 122.5 0.1 3.6e-17 62.6 0.0 3.6 2 1 1 3 3 3 3 Protein of unknown function (DUF4246) F-box-like PF12937.7 RKO88334.1 - 1e-08 34.9 2.2 2.8e-08 33.5 2.0 1.8 2 0 0 2 2 2 1 F-box-like Isochorismatase PF00857.20 RKO88336.1 - 1.8e-20 73.8 0.0 2.5e-20 73.4 0.0 1.2 1 0 0 1 1 1 1 Isochorismatase family Oxidored_nitro PF00148.19 RKO88336.1 - 0.11 11.3 0.0 0.11 11.2 0.0 1.1 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase IIGP PF05049.13 RKO88337.1 - 0.14 11.2 0.0 0.19 10.7 0.0 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) Plectin PF00681.20 RKO88337.1 - 0.15 12.0 0.0 0.6 10.0 0.0 1.9 2 0 0 2 2 2 0 Plectin repeat E1-E2_ATPase PF00122.20 RKO88340.1 - 6e-20 71.5 3.3 9.9e-20 70.8 3.3 1.3 1 0 0 1 1 1 1 E1-E2 ATPase Cation_ATPase PF13246.6 RKO88340.1 - 5.8e-05 23.1 0.0 0.00019 21.4 0.0 1.8 2 0 0 2 2 2 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 RKO88340.1 - 0.0089 15.7 0.1 0.032 13.9 0.1 1.9 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Phage_holin_3_7 PF05449.11 RKO88340.1 - 0.063 13.3 2.0 3.6 7.7 0.0 2.8 3 0 0 3 3 3 0 Putative 3TM holin, Phage_holin_3 DUF2768 PF10966.8 RKO88341.1 - 0.05 14.0 2.3 0.12 12.8 2.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2768) SLC3A2_N PF16028.5 RKO88341.1 - 0.076 12.6 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 Solute carrier family 3 member 2 N-terminus Pkinase PF00069.25 RKO88342.1 - 1.5e-43 149.1 0.0 1.8e-42 145.5 0.0 1.9 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO88342.1 - 8.6e-31 107.2 0.0 1e-30 106.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO88342.1 - 5.8e-09 35.2 0.0 7.3e-09 34.9 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 RKO88342.1 - 0.00027 21.0 0.4 0.00058 19.9 0.4 1.6 1 1 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.6 RKO88342.1 - 0.00064 19.1 0.0 0.00098 18.5 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 RKO88342.1 - 0.0015 17.9 0.3 0.037 13.4 0.1 2.1 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Aconitase PF00330.20 RKO88343.1 - 1.2e-150 502.6 0.0 1.5e-150 502.2 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 RKO88343.1 - 4e-42 143.7 0.0 7.5e-42 142.8 0.0 1.5 1 0 0 1 1 1 1 Aconitase C-terminal domain DSBA PF01323.20 RKO88343.1 - 0.19 11.5 0.0 0.48 10.2 0.0 1.6 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Cyt-b5 PF00173.28 RKO88344.1 - 4.2e-06 26.8 0.0 7.3e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain SNF2_N PF00176.23 RKO88346.1 - 4.6e-63 213.0 0.0 7e-63 212.5 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 RKO88346.1 - 7.3e-17 61.7 0.0 1.4e-16 60.8 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO88346.1 - 2.3e-07 31.0 0.0 4.1e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 RKO88346.1 - 0.00054 19.8 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase HDA2-3 PF11496.8 RKO88346.1 - 0.12 11.6 0.0 16 4.5 0.0 2.7 3 0 0 3 3 3 0 Class II histone deacetylase complex subunits 2 and 3 Asp PF00026.23 RKO88348.1 - 4.2e-46 157.8 0.8 5.3e-46 157.5 0.8 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 RKO88348.1 - 0.0021 17.9 0.0 0.0041 16.9 0.0 1.6 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal TAXi_N PF14543.6 RKO88348.1 - 0.041 14.1 0.3 0.11 12.8 0.1 1.8 2 0 0 2 2 2 0 Xylanase inhibitor N-terminal Peptidase_S9 PF00326.21 RKO88349.1 - 1.5e-55 188.0 0.0 2.6e-54 183.9 0.0 2.4 2 1 0 2 2 2 1 Prolyl oligopeptidase family Peptidase_S9_N PF02897.15 RKO88349.1 - 3.1e-53 181.1 0.7 3.8e-53 180.8 0.7 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Hydrolase_4 PF12146.8 RKO88349.1 - 0.04 13.2 0.0 0.3 10.3 0.0 2.0 2 0 0 2 2 2 0 Serine aminopeptidase, S33 Peptidase_S15 PF02129.18 RKO88349.1 - 0.15 11.6 0.0 0.31 10.6 0.0 1.4 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) DUF3292 PF11696.8 RKO88350.1 - 0.18 10.1 1.8 0.28 9.5 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) Csm1_N PF18504.1 RKO88351.1 - 0.0024 18.2 11.2 0.51 10.7 1.3 3.6 3 1 0 3 3 3 2 Csm1 N-terminal domain Filament PF00038.21 RKO88351.1 - 0.0024 17.5 16.0 0.19 11.2 11.3 2.6 2 1 0 2 2 2 2 Intermediate filament protein Tup_N PF08581.10 RKO88351.1 - 0.018 15.3 9.0 0.2 11.9 0.2 3.3 3 1 0 3 3 3 0 Tup N-terminal HrpB2 PF09487.10 RKO88351.1 - 0.027 14.9 0.8 0.88 10.0 0.2 2.4 2 0 0 2 2 2 0 Bacterial type III secretion protein (HrpB2) DUF2046 PF09755.9 RKO88351.1 - 0.056 12.7 7.7 0.098 11.9 0.5 2.7 2 1 1 3 3 3 0 Uncharacterized conserved protein H4 (DUF2046) DUF641 PF04859.12 RKO88351.1 - 0.084 13.2 5.9 12 6.2 0.1 3.1 3 0 0 3 3 3 0 Plant protein of unknown function (DUF641) MAD PF05557.13 RKO88351.1 - 0.12 10.8 9.3 0.074 11.4 1.3 2.0 2 0 0 2 2 2 0 Mitotic checkpoint protein TMF_DNA_bd PF12329.8 RKO88351.1 - 0.2 11.7 14.3 0.18 11.8 4.2 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding CEP63 PF17045.5 RKO88351.1 - 0.21 11.5 10.6 2.3 8.1 0.1 3.0 3 0 0 3 3 3 0 Centrosomal protein of 63 kDa FlaC_arch PF05377.11 RKO88351.1 - 0.37 11.2 6.2 11 6.4 0.1 3.4 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) BBP1_C PF15272.6 RKO88351.1 - 0.51 10.1 5.2 5 6.9 0.1 2.2 2 0 0 2 2 2 0 Spindle pole body component BBP1, C-terminal Bap31_Bap29_C PF18035.1 RKO88351.1 - 0.61 10.1 11.2 16 5.6 0.1 4.0 4 0 0 4 4 4 0 Bap31/Bap29 cytoplasmic coiled-coil domain GBR2_CC PF18455.1 RKO88351.1 - 0.65 10.2 8.2 2.9 8.1 0.3 3.7 3 1 1 4 4 4 0 Gamma-aminobutyric acid type B receptor subunit 2 coiled-coil domain Phage_GP20 PF06810.11 RKO88351.1 - 0.76 9.6 7.3 1.9 8.3 2.8 2.8 3 0 0 3 3 3 0 Phage minor structural protein GP20 DUF4515 PF14988.6 RKO88351.1 - 0.86 9.4 13.5 1.5 8.6 4.2 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4515) APG6_N PF17675.1 RKO88351.1 - 1 9.9 18.0 0.49 10.9 0.2 3.1 2 1 0 3 3 3 0 Apg6 coiled-coil region DUF3450 PF11932.8 RKO88351.1 - 1.6 8.0 11.2 3.3 6.9 1.3 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3450) FAM76 PF16046.5 RKO88351.1 - 1.7 7.9 4.8 11 5.2 0.1 2.1 2 0 0 2 2 2 0 FAM76 protein DUF4407 PF14362.6 RKO88351.1 - 2.2 7.5 14.8 5.8 6.2 8.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) KLRAQ PF10205.9 RKO88351.1 - 3.8 7.8 7.5 4.6 7.5 0.3 2.8 3 0 0 3 3 3 0 Predicted coiled-coil domain-containing protein Spc7 PF08317.11 RKO88351.1 - 3.9 6.3 15.2 7 5.4 0.0 2.8 2 1 0 2 2 2 0 Spc7 kinetochore protein DUF4201 PF13870.6 RKO88351.1 - 5.1 6.8 12.2 9 6.0 0.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4201) YabA PF06156.13 RKO88351.1 - 6.1 7.5 9.1 12 6.6 1.0 3.2 2 2 1 3 3 3 0 Initiation control protein YabA ADIP PF11559.8 RKO88351.1 - 8.6 6.4 16.0 0.2 11.7 4.4 2.9 3 0 0 3 3 3 0 Afadin- and alpha -actinin-Binding PP2C PF00481.21 RKO88352.1 - 2.4e-61 207.6 0.0 2.8e-61 207.4 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C Pkinase PF00069.25 RKO88353.1 - 0.0047 16.3 0.0 0.042 13.2 0.0 2.0 1 1 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 RKO88353.1 - 0.019 14.3 0.0 0.035 13.5 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family ATE_N PF04376.13 RKO88354.1 - 1.3e-26 92.8 1.6 1.8e-26 92.3 1.6 1.2 1 0 0 1 1 1 1 Arginine-tRNA-protein transferase, N terminus ABC_trans_aux PF03886.13 RKO88354.1 - 0.053 13.1 0.0 0.094 12.3 0.0 1.4 1 0 0 1 1 1 0 ABC-type transport auxiliary lipoprotein component PDDEXK_2 PF12784.7 RKO88357.1 - 0.19 11.2 0.0 0.25 10.9 0.0 1.1 1 0 0 1 1 1 0 PD-(D/E)XK nuclease family transposase S1-P1_nuclease PF02265.16 RKO88359.1 - 7.3e-19 68.6 0.4 9.7e-19 68.2 0.4 1.1 1 0 0 1 1 1 1 S1/P1 Nuclease UDG PF03167.19 RKO88360.1 - 9.9e-25 87.3 0.0 1.3e-24 86.9 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily DnaJ PF00226.31 RKO88361.1 - 2.9e-10 40.1 0.3 5.6e-10 39.2 0.3 1.5 1 0 0 1 1 1 1 DnaJ domain PH PF00169.29 RKO88362.1 - 0.0057 17.1 0.1 0.0091 16.5 0.1 1.3 1 0 0 1 1 1 1 PH domain p450 PF00067.22 RKO88363.1 - 1.9e-36 125.8 0.0 4.5e-18 65.2 0.0 2.9 2 1 1 3 3 3 3 Cytochrome P450 Tubulin PF00091.25 RKO88363.1 - 0.0017 18.5 0.0 0.005 17.0 0.0 1.7 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain p450 PF00067.22 RKO88364.1 - 8.1e-08 31.4 0.0 9.5e-08 31.2 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF805 PF05656.14 RKO88366.1 - 0.91 10.0 12.6 9.1 6.7 11.7 2.6 1 1 0 1 1 1 0 Protein of unknown function (DUF805) Carn_acyltransf PF00755.20 RKO88367.1 - 3.4e-208 693.0 0.0 3.8e-208 692.9 0.0 1.0 1 0 0 1 1 1 1 Choline/Carnitine o-acyltransferase N_Asn_amidohyd PF14736.6 RKO88367.1 - 0.15 11.2 0.0 0.25 10.5 0.0 1.2 1 0 0 1 1 1 0 Protein N-terminal asparagine amidohydrolase Pkinase PF00069.25 RKO88369.1 - 5.3e-44 150.6 0.0 8.3e-44 149.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO88369.1 - 3.2e-22 79.1 0.0 3.5e-16 59.3 0.0 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 RKO88369.1 - 0.0011 18.3 0.0 0.0099 15.2 0.0 2.0 1 1 0 1 1 1 1 Kinase-like Pkinase_C PF00433.24 RKO88369.1 - 0.0017 19.0 0.0 0.0017 19.0 0.0 2.0 2 0 0 2 2 2 1 Protein kinase C terminal domain Haspin_kinase PF12330.8 RKO88369.1 - 0.0051 15.8 0.0 0.0071 15.3 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Seadorna_VP7 PF07387.11 RKO88369.1 - 0.026 13.6 0.0 0.039 13.0 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 APH PF01636.23 RKO88369.1 - 0.13 12.2 0.1 0.24 11.3 0.1 1.5 1 1 0 1 1 1 0 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 RKO88369.1 - 0.23 10.4 0.0 0.38 9.7 0.0 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase CAP_GLY PF01302.25 RKO88370.1 - 5.3e-07 29.6 0.1 1.3e-06 28.3 0.1 1.6 1 0 0 1 1 1 1 CAP-Gly domain BTB PF00651.31 RKO88370.1 - 1.4e-05 25.3 0.0 3.1e-05 24.2 0.0 1.5 1 0 0 1 1 1 1 BTB/POZ domain Ribosomal_S11 PF00411.19 RKO88371.1 - 7.6e-22 77.8 0.5 9.2e-22 77.5 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 Peptidase_M19 PF01244.21 RKO88371.1 - 0.13 11.4 0.1 0.16 11.1 0.1 1.1 1 0 0 1 1 1 0 Membrane dipeptidase (Peptidase family M19) Aldo_ket_red PF00248.21 RKO88374.1 - 3.6e-56 190.5 0.1 5.6e-44 150.5 0.0 2.0 1 1 1 2 2 2 2 Aldo/keto reductase family Ank_5 PF13857.6 RKO88375.1 - 4.5e-21 74.6 2.6 9.3e-11 41.8 0.1 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO88375.1 - 2.9e-17 62.8 1.3 9.4e-11 42.0 0.2 3.2 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO88375.1 - 3.3e-17 62.8 0.2 9.3e-13 48.6 0.1 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank PF00023.30 RKO88375.1 - 1.4e-12 47.5 0.5 2.4e-05 24.6 0.1 3.5 4 0 0 4 4 4 2 Ankyrin repeat Ank_3 PF13606.6 RKO88375.1 - 9.8e-09 34.8 0.0 0.0069 16.8 0.0 3.3 4 0 0 4 4 4 2 Ankyrin repeat BsuPI PF12690.7 RKO88375.1 - 0.025 14.6 0.0 0.043 13.9 0.0 1.4 1 0 0 1 1 1 0 Intracellular proteinase inhibitor ACBP PF00887.19 RKO88375.1 - 0.14 12.4 0.0 0.26 11.5 0.0 1.5 1 0 0 1 1 1 0 Acyl CoA binding protein WD40 PF00400.32 RKO88376.1 - 0.0017 19.2 12.7 0.88 10.6 0.5 4.2 4 0 0 4 4 4 3 WD domain, G-beta repeat DUF3432 PF11914.8 RKO88377.1 - 0.017 15.4 16.0 0.017 15.4 16.0 3.3 1 1 2 3 3 3 0 Domain of unknown function (DUF3432) HEAT_2 PF13646.6 RKO88378.1 - 6.7e-13 48.8 1.5 6.7e-13 48.8 1.5 2.1 2 0 0 2 2 2 1 HEAT repeats HEAT PF02985.22 RKO88378.1 - 1.6e-05 24.8 0.9 0.29 11.5 0.1 3.6 3 0 0 3 3 3 2 HEAT repeat FAM216B PF15107.6 RKO88381.1 - 0.063 13.2 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 FAM216B protein family SH3-RhoG_link PF16609.5 RKO88383.1 - 0.029 14.1 0.0 0.032 13.9 0.0 1.1 1 0 0 1 1 1 0 SH3-RhoGEF linking unstructured region TerY_C PF15616.6 RKO88384.1 - 0.098 12.8 0.3 0.17 12.0 0.3 1.3 1 0 0 1 1 1 0 TerY-C metal binding domain ATP_bind_1 PF03029.17 RKO88385.1 - 0.056 13.2 0.0 0.079 12.7 0.0 1.1 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein DUF5492 PF17596.2 RKO88385.1 - 0.14 12.5 0.1 0.27 11.6 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5492) peroxidase PF00141.23 RKO88386.1 - 2e-17 63.6 0.1 2.4e-17 63.4 0.1 1.1 1 0 0 1 1 1 1 Peroxidase peroxidase PF00141.23 RKO88387.1 - 6.4e-29 101.3 0.0 1.3e-28 100.3 0.0 1.5 1 0 0 1 1 1 1 Peroxidase HEAT PF02985.22 RKO88388.1 - 3.6e-34 113.9 22.2 0.0053 16.9 0.2 12.7 13 0 0 13 13 13 10 HEAT repeat HEAT_2 PF13646.6 RKO88388.1 - 3e-28 98.0 9.6 2.5e-08 34.2 0.0 7.4 3 2 1 6 6 6 6 HEAT repeats Vac14_Fab1_bd PF12755.7 RKO88388.1 - 1e-13 51.7 1.6 0.044 14.4 0.2 6.4 2 2 4 6 6 6 4 Vacuolar 14 Fab1-binding region HEAT_EZ PF13513.6 RKO88388.1 - 1.9e-11 44.2 7.7 0.43 11.1 0.0 7.4 7 1 1 8 8 8 4 HEAT-like repeat Cnd1 PF12717.7 RKO88388.1 - 6.1e-07 29.6 13.3 0.059 13.4 0.4 4.6 3 1 1 4 4 4 3 non-SMC mitotic condensation complex subunit 1 Arm PF00514.23 RKO88388.1 - 0.00094 19.1 1.0 3.3 7.9 0.0 4.4 5 0 0 5 5 5 2 Armadillo/beta-catenin-like repeat IFRD PF05004.13 RKO88388.1 - 0.0027 16.9 0.8 0.014 14.5 0.7 2.3 1 1 0 1 1 1 1 Interferon-related developmental regulator (IFRD) RTP1_C1 PF10363.9 RKO88388.1 - 0.0045 17.1 4.8 0.2 11.8 0.2 3.8 4 1 1 5 5 5 1 Required for nuclear transport of RNA pol II C-terminus 1 DNA_alkylation PF08713.11 RKO88388.1 - 0.013 15.3 0.6 1.6 8.4 0.0 3.1 2 1 1 3 3 3 0 DNA alkylation repair enzyme CLASP_N PF12348.8 RKO88388.1 - 0.038 13.6 7.9 3.8 7.0 0.1 4.5 3 1 3 6 6 6 0 CLASP N terminal HEAT_PBS PF03130.16 RKO88388.1 - 0.056 14.1 0.1 26 5.9 0.0 4.0 3 0 0 3 3 2 0 PBS lyase HEAT-like repeat BTB PF00651.31 RKO88389.1 - 1e-10 41.8 0.0 2.9e-10 40.3 0.0 1.6 2 0 0 2 2 2 1 BTB/POZ domain MSA-2c PF12238.8 RKO88391.1 - 0.19 11.7 5.7 0.23 11.4 5.7 1.1 1 0 0 1 1 1 0 Merozoite surface antigen 2c RVT_2 PF07727.14 RKO88392.1 - 0.23 11.0 0.0 0.31 10.6 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Cation_ATPase_C PF00689.21 RKO88395.1 - 2e-08 34.2 0.5 2.3e-08 34.0 0.5 1.0 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus PHB_acc PF05233.13 RKO88395.1 - 0.17 11.9 0.0 0.17 11.9 0.0 1.7 3 0 0 3 3 3 0 PHB accumulation regulatory domain PX PF00787.24 RKO88396.1 - 8.1e-05 22.6 0.0 0.00016 21.6 0.0 1.4 1 0 0 1 1 1 1 PX domain Peptidase_S8 PF00082.22 RKO88397.1 - 1.3e-11 44.4 0.1 1.6e-11 44.1 0.1 1.1 1 0 0 1 1 1 1 Subtilase family EAR PF07897.11 RKO88397.1 - 0.026 14.1 0.2 0.5 10.0 0.1 2.4 2 0 0 2 2 2 0 Ethylene-responsive binding factor-associated repression Helicase_C PF00271.31 RKO88398.1 - 1.9e-08 34.6 0.0 3.1e-08 34.0 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Ligase_CoA PF00549.19 RKO88398.1 - 0.039 13.8 0.0 0.061 13.1 0.0 1.3 1 0 0 1 1 1 0 CoA-ligase Asp PF00026.23 RKO88399.1 - 1.1e-18 67.8 0.0 1.2e-18 67.6 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease GST_N PF02798.20 RKO88400.1 - 0.01 16.1 0.0 0.031 14.6 0.0 1.7 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain Barttin PF15462.6 RKO88402.1 - 0.29 10.9 2.5 0.63 9.8 2.5 1.6 1 0 0 1 1 1 0 Bartter syndrome, infantile, with sensorineural deafness (Barttin) GDA1_CD39 PF01150.17 RKO88403.1 - 2.7e-101 339.3 0.0 3.3e-101 339.0 0.0 1.0 1 0 0 1 1 1 1 GDA1/CD39 (nucleoside phosphatase) family Cript PF10235.9 RKO88404.1 - 5.1e-33 113.5 7.9 5.1e-33 113.5 7.9 1.5 2 0 0 2 2 2 1 Microtubule-associated protein CRIPT DUF2039 PF10217.9 RKO88404.1 - 0.0029 17.9 12.1 0.0053 17.1 9.0 2.1 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2039) zinc_ribbon_15 PF17032.5 RKO88404.1 - 0.44 11.3 13.8 1.6 9.5 10.5 2.6 2 1 0 2 2 2 0 zinc-ribbon family zinc_ribbon_2 PF13240.6 RKO88404.1 - 0.58 9.9 11.6 21 5.0 0.0 3.6 3 0 0 3 3 3 0 zinc-ribbon domain zf-piccolo PF05715.13 RKO88404.1 - 9.6 6.4 12.3 6.2 7.1 7.9 2.4 2 1 1 3 3 3 0 Piccolo Zn-finger UPRTase PF14681.6 RKO88405.1 - 2.8e-61 206.6 0.0 4.3e-61 206.0 0.0 1.3 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 RKO88405.1 - 0.006 16.1 0.2 0.01 15.3 0.2 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GTP_CH_N PF12471.8 RKO88406.1 - 1.5e-87 292.3 0.0 2.9e-87 291.4 0.0 1.4 1 0 0 1 1 1 1 GTP cyclohydrolase N terminal GTP_cyclohydro2 PF00925.20 RKO88406.1 - 2.9e-14 53.0 0.0 4.4e-14 52.4 0.0 1.3 1 0 0 1 1 1 1 GTP cyclohydrolase II Mito_carr PF00153.27 RKO88407.1 - 1.5e-15 56.8 0.1 3.6e-05 23.6 0.0 4.4 3 2 1 4 4 4 4 Mitochondrial carrier protein F-box-like PF12937.7 RKO88408.1 - 0.0032 17.3 0.0 0.008 16.1 0.0 1.6 1 0 0 1 1 1 1 F-box-like Arg_decarbox_C PF17944.1 RKO88408.1 - 0.03 14.9 1.2 0.23 12.0 0.1 2.5 2 0 0 2 2 2 0 Arginine decarboxylase C-terminal helical extension F-box PF00646.33 RKO88408.1 - 0.065 13.1 0.0 0.16 11.9 0.0 1.6 1 0 0 1 1 1 0 F-box domain 2OG-FeII_Oxy_3 PF13640.6 RKO88411.1 - 1.8e-09 38.3 0.0 3e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily F5_F8_type_C PF00754.25 RKO88413.1 - 0.0016 18.5 4.0 0.0016 18.5 4.0 2.7 2 0 0 2 2 2 1 F5/8 type C domain C2 PF00168.30 RKO88414.1 - 0.088 13.1 0.0 0.19 12.0 0.0 1.6 1 1 0 1 1 1 0 C2 domain Glyco_hydro_43 PF04616.14 RKO88416.1 - 3.2e-29 102.1 0.1 4e-29 101.8 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 43 Sec1 PF00995.23 RKO88418.1 - 4.5e-38 131.9 0.0 6.9e-38 131.2 0.0 1.2 1 0 0 1 1 1 1 Sec1 family PPP4R2 PF09184.11 RKO88418.1 - 0.023 14.3 13.1 0.068 12.8 13.1 1.8 1 0 0 1 1 1 0 PPP4R2 Merozoite_SPAM PF07133.11 RKO88418.1 - 7.1 6.6 32.2 16 5.4 32.2 1.5 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) Pantoate_ligase PF02569.15 RKO88419.1 - 0.13 11.4 0.1 0.22 10.7 0.1 1.2 1 0 0 1 1 1 0 Pantoate-beta-alanine ligase TMF_DNA_bd PF12329.8 RKO88420.1 - 1.2e-13 50.9 14.4 1.2e-13 50.9 14.4 5.5 5 2 1 6 6 6 1 TATA element modulatory factor 1 DNA binding WDCP PF15390.6 RKO88420.1 - 0.12 10.8 14.0 0.011 14.1 9.5 1.5 2 0 0 2 2 2 0 WD repeat and coiled-coil-containing protein family DUF1722 PF08349.11 RKO88420.1 - 0.17 12.2 0.3 0.57 10.5 0.3 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF1722) Cauli_AT PF03233.13 RKO88420.1 - 5.4 6.9 8.2 27 4.7 2.3 2.8 2 0 0 2 2 2 0 Aphid transmission protein Lipoprotein_20 PF13942.6 RKO88420.1 - 6.3 6.7 21.2 11 6.0 5.2 3.8 2 1 0 3 3 3 0 YfhG lipoprotein Nif11 PF07862.11 RKO88420.1 - 6.7 7.1 8.1 3 8.2 1.8 3.4 3 0 0 3 3 3 0 Nif11 domain Lysine_decarbox PF03641.14 RKO88421.1 - 3.4e-33 114.6 0.1 3.3e-32 111.4 0.1 1.9 1 1 0 1 1 1 1 Possible lysine decarboxylase LDcluster4 PF18306.1 RKO88421.1 - 1.5e-06 27.9 0.3 1.7e-05 24.5 0.3 2.0 1 1 0 1 1 1 1 SLOG cluster4 family NAM-associated PF14303.6 RKO88422.1 - 1.1e-05 26.2 7.4 0.00014 22.6 7.4 2.0 1 1 0 1 1 1 1 No apical meristem-associated C-terminal domain Ndc1_Nup PF09531.10 RKO88422.1 - 0.017 13.8 0.1 0.019 13.7 0.1 1.0 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup NAT PF04768.13 RKO88422.1 - 0.02 14.6 0.1 0.024 14.3 0.1 1.1 1 0 0 1 1 1 0 NAT, N-acetyltransferase, of N-acetylglutamate synthase Methyltransf_25 PF13649.6 RKO88422.1 - 0.082 13.6 0.0 0.12 13.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain COG5 PF10392.9 RKO88423.1 - 3.9e-28 98.2 0.6 3.9e-28 98.2 0.6 2.5 3 0 0 3 3 3 1 Golgi transport complex subunit 5 Vps51 PF08700.11 RKO88423.1 - 1e-05 25.5 0.4 4.2e-05 23.5 0.1 2.3 2 0 0 2 2 2 1 Vps51/Vps67 COG2 PF06148.11 RKO88423.1 - 0.00024 21.2 0.2 0.0024 18.0 0.1 2.6 2 0 0 2 2 2 1 COG (conserved oligomeric Golgi) complex component, COG2 MDD_C PF18376.1 RKO88423.1 - 0.14 11.9 0.0 0.33 10.7 0.0 1.6 1 0 0 1 1 1 0 Mevalonate 5-diphosphate decarboxylase C-terminal domain 4HBT_3 PF13622.6 RKO88424.1 - 2.6e-29 103.2 0.0 3.3e-29 102.9 0.0 1.0 1 0 0 1 1 1 1 Thioesterase-like superfamily 4HBT PF03061.22 RKO88424.1 - 0.00011 22.5 0.0 0.0091 16.3 0.0 2.7 2 2 0 2 2 2 1 Thioesterase superfamily Cyclin_N PF00134.23 RKO88425.1 - 8.7e-05 22.3 0.0 0.00013 21.7 0.0 1.2 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin PF08613.11 RKO88425.1 - 0.0039 17.6 0.0 0.0043 17.4 0.0 1.2 1 0 0 1 1 1 1 Cyclin ATP-synt_C PF00137.21 RKO88426.1 - 2.6e-28 98.2 26.2 4.9e-16 58.8 8.6 2.5 2 0 0 2 2 2 2 ATP synthase subunit C DUF3671 PF12420.8 RKO88426.1 - 0.17 12.0 0.9 0.72 9.9 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function SLATT_5 PF18160.1 RKO88426.1 - 1 8.6 3.5 0.5 9.7 0.6 1.9 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 RhoGEF PF00621.20 RKO88428.1 - 9.6e-38 130.2 0.0 1.3e-37 129.8 0.0 1.2 1 0 0 1 1 1 1 RhoGEF domain PSDC PF12588.8 RKO88428.1 - 0.037 14.0 0.0 0.13 12.2 0.0 1.8 1 1 0 1 1 1 0 Phophatidylserine decarboxylase adh_short PF00106.25 RKO88429.1 - 1e-29 103.4 0.0 1.4e-29 102.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO88429.1 - 4.7e-24 85.3 0.1 7.1e-24 84.6 0.1 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 RKO88429.1 - 0.00012 22.1 0.0 0.00021 21.2 0.0 1.4 1 0 0 1 1 1 1 KR domain Eno-Rase_NADH_b PF12242.8 RKO88430.1 - 1e-06 28.4 0.3 3.6e-06 26.6 0.2 1.7 1 1 1 2 2 2 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase adh_short PF00106.25 RKO88430.1 - 0.00067 19.2 0.0 0.00067 19.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase APH PF01636.23 RKO88431.1 - 1.5e-42 146.2 0.0 2e-42 145.8 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 RKO88431.1 - 3.5e-06 26.8 0.0 5.2e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase EcKinase PF02958.20 RKO88431.1 - 4.1e-05 23.1 0.0 6.3e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Ecdysteroid kinase Fructosamin_kin PF03881.14 RKO88431.1 - 0.0038 16.5 0.0 0.038 13.2 0.0 2.1 1 1 0 1 1 1 1 Fructosamine kinase Pkinase PF00069.25 RKO88431.1 - 0.005 16.2 0.0 2.5 7.4 0.0 2.1 2 0 0 2 2 2 2 Protein kinase domain Kdo PF06293.14 RKO88431.1 - 0.0055 16.1 0.0 0.24 10.7 0.0 2.1 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family DUF1679 PF07914.11 RKO88431.1 - 0.012 14.6 0.0 0.11 11.3 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1679) Peptidase_S8 PF00082.22 RKO88432.1 - 8.1e-09 35.2 0.3 9.6e-09 34.9 0.3 1.1 1 0 0 1 1 1 1 Subtilase family Inhibitor_I9 PF05922.16 RKO88432.1 - 0.0023 18.6 0.0 0.0058 17.3 0.0 1.7 2 0 0 2 2 2 1 Peptidase inhibitor I9 Lipoprotein_15 PF03640.15 RKO88432.1 - 0.15 11.7 0.2 0.27 10.8 0.2 1.4 1 0 0 1 1 1 0 Secreted repeat of unknown function FAM199X PF15814.5 RKO88437.1 - 0.35 9.9 0.2 0.62 9.1 0.2 1.3 1 0 0 1 1 1 0 Protein family FAM199X DUF4456 PF14644.6 RKO88439.1 - 1.2e-06 28.3 0.7 7.6e-05 22.5 0.0 2.9 2 1 0 2 2 2 1 Domain of unknown function (DUF4456) Endonuc_Holl PF10107.9 RKO88439.1 - 0.046 13.6 0.1 0.19 11.5 0.1 2.1 1 0 0 1 1 1 0 Endonuclease related to archaeal Holliday junction resolvase Baculo_PEP_C PF04513.12 RKO88439.1 - 0.088 12.9 0.1 3.2 7.8 0.0 3.0 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus HisKA_3 PF07730.13 RKO88439.1 - 0.31 11.6 7.4 1.3 9.6 0.1 3.9 3 0 0 3 3 3 0 Histidine kinase SMC_Nse1 PF07574.13 RKO88439.1 - 0.55 10.1 3.2 2.1 8.2 3.2 2.1 1 1 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex RRP36 PF06102.12 RKO88439.1 - 0.69 9.9 6.2 5 7.1 0.6 2.8 2 0 0 2 2 2 0 rRNA biogenesis protein RRP36 FAM184 PF15665.5 RKO88439.1 - 1.1 9.0 13.6 0.07 12.9 5.9 2.7 2 0 0 2 2 2 0 Family with sequence similarity 184, A and B Acyl-CoA_dh_1 PF00441.24 RKO88441.1 - 9.4e-36 123.3 0.3 1.4e-35 122.7 0.3 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Cyt-b5 PF00173.28 RKO88441.1 - 4.9e-19 68.3 0.0 1.2e-18 67.0 0.0 1.7 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Acyl-CoA_dh_M PF02770.19 RKO88441.1 - 1.2e-16 60.7 0.1 2.2e-16 59.8 0.1 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 RKO88441.1 - 8.1e-11 42.6 0.0 7.2e-10 39.5 0.0 2.3 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 RKO88441.1 - 0.00047 20.4 0.0 0.00081 19.7 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Fimbrial_K88 PF02432.15 RKO88441.1 - 0.14 12.1 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 Fimbrial, major and minor subunit zf_UBZ PF18439.1 RKO88442.1 - 2e-06 27.3 1.6 3.9e-06 26.3 1.6 1.5 1 0 0 1 1 1 1 Ubiquitin-Binding Zinc Finger IMS_C PF11799.8 RKO88442.1 - 0.0027 18.4 0.0 0.0041 17.8 0.0 1.3 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain zf-C2H2_3 PF13878.6 RKO88442.1 - 0.047 13.5 0.4 0.093 12.6 0.4 1.5 1 0 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO DUF4201 PF13870.6 RKO88443.1 - 0.00028 20.7 2.6 0.036 13.8 1.5 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4201) Mod_r PF07200.13 RKO88443.1 - 0.0059 16.7 0.3 0.0059 16.7 0.3 2.2 2 1 0 2 2 2 1 Modifier of rudimentary (Mod(r)) protein DUF4140 PF13600.6 RKO88443.1 - 0.015 15.7 13.1 0.66 10.5 1.2 3.3 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) GAS PF13851.6 RKO88443.1 - 0.019 14.3 1.6 1.9 7.8 0.2 2.8 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding PDT PF00800.18 RKO88443.1 - 0.027 14.3 0.3 0.062 13.1 0.1 1.7 2 0 0 2 2 2 0 Prephenate dehydratase OEP PF02321.18 RKO88443.1 - 0.048 13.5 0.5 0.24 11.2 0.0 1.9 2 0 0 2 2 2 0 Outer membrane efflux protein GTP-bdg_M PF16360.5 RKO88443.1 - 0.086 13.4 1.7 0.64 10.7 0.0 2.8 3 0 0 3 3 3 0 GTP-binding GTPase Middle Region YabA PF06156.13 RKO88443.1 - 0.09 13.4 2.8 0.71 10.5 0.4 3.0 2 1 2 4 4 4 0 Initiation control protein YabA SCHIP-1 PF10148.9 RKO88443.1 - 0.12 12.0 4.5 0.6 9.7 0.1 2.5 2 1 0 2 2 2 0 Schwannomin-interacting protein 1 DUF4164 PF13747.6 RKO88443.1 - 0.13 12.6 15.0 1.2 9.4 7.5 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4164) ATG16 PF08614.11 RKO88443.1 - 0.2 11.9 17.7 0.43 10.8 6.7 2.2 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) DivIC PF04977.15 RKO88443.1 - 0.25 11.1 1.2 1.2 9.0 0.1 2.4 2 1 0 2 2 2 0 Septum formation initiator HAP1_N PF04849.13 RKO88443.1 - 0.48 9.6 9.8 3.7 6.7 4.3 2.2 1 1 0 2 2 2 0 HAP1 N-terminal conserved region DUF4094 PF13334.6 RKO88443.1 - 0.91 10.0 6.1 5.7 7.4 0.5 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4094) SlyX PF04102.12 RKO88443.1 - 1.2 9.8 6.1 2.8 8.6 0.5 3.0 3 1 0 3 3 2 0 SlyX DUF4407 PF14362.6 RKO88443.1 - 1.6 8.0 6.9 2.9 7.1 1.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF1635 PF07795.11 RKO88443.1 - 2 8.3 7.9 1 9.2 5.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1635) JAKMIP_CC3 PF16034.5 RKO88443.1 - 2.6 7.9 7.5 0.45 10.4 1.7 2.1 1 1 1 2 2 2 0 JAKMIP CC3 domain TPR_MLP1_2 PF07926.12 RKO88443.1 - 4.8 7.3 10.0 1.2 9.2 1.6 2.6 3 0 0 3 3 3 0 TPR/MLP1/MLP2-like protein Cluap1 PF10234.9 RKO88443.1 - 5.1 6.4 7.6 0.88 8.9 2.8 1.9 1 1 2 3 3 3 0 Clusterin-associated protein-1 DHR10 PF18595.1 RKO88443.1 - 5.2 7.2 12.2 1.7 8.7 3.1 3.3 3 1 0 3 3 3 0 Designed helical repeat protein 10 domain HIP1_clath_bdg PF16515.5 RKO88443.1 - 5.7 7.6 9.4 0.98 10.1 2.1 2.8 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Fez1 PF06818.15 RKO88443.1 - 7.4 7.0 9.3 42 4.5 9.3 1.9 1 1 0 1 1 1 0 Fez1 CENP-H PF05837.12 RKO88443.1 - 7.7 7.0 11.4 1.8 9.0 3.3 3.0 1 1 1 3 3 3 0 Centromere protein H (CENP-H) CENP-F_leu_zip PF10473.9 RKO88443.1 - 8.6 6.4 10.3 13 5.8 0.1 2.7 2 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ERM PF00769.19 RKO88443.1 - 8.7 6.1 14.0 21 4.8 14.0 1.7 1 1 0 1 1 1 0 Ezrin/radixin/moesin family zf-C2H2 PF00096.26 RKO88444.1 - 1.4e-08 34.7 5.8 4.1e-05 23.8 1.2 2.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO88444.1 - 2.2e-05 24.9 6.2 0.00038 21.1 1.0 2.5 2 1 0 2 2 2 1 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO88444.1 - 4.4e-05 23.7 1.6 4.4e-05 23.7 1.6 2.7 3 1 0 3 3 3 1 Zinc-finger double domain zf-C2H2_6 PF13912.6 RKO88444.1 - 0.004 17.1 0.2 0.004 17.1 0.2 1.7 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 RKO88444.1 - 0.0053 17.0 0.0 0.0053 17.0 0.0 2.2 3 0 0 3 3 3 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 RKO88444.1 - 0.018 15.4 0.6 0.1 13.0 0.1 2.2 2 0 0 2 2 2 0 Zinc-finger of C2H2 type Zn-C2H2_12 PF18112.1 RKO88444.1 - 0.021 15.3 2.0 0.18 12.3 0.1 2.4 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain FOXP-CC PF16159.5 RKO88444.1 - 0.03 15.0 0.7 0.3 11.8 0.1 2.2 1 1 1 2 2 2 0 FOXP coiled-coil domain zf-Di19 PF05605.12 RKO88444.1 - 0.049 13.9 4.7 0.13 12.6 2.5 2.1 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding DUF1769 PF08588.10 RKO88451.1 - 1.2e-19 70.2 0.1 2.5e-19 69.2 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1769) Nbs1_C PF08599.10 RKO88455.1 - 0.12 12.5 0.1 0.25 11.5 0.1 1.5 1 0 0 1 1 1 0 DNA damage repair protein Nbs1 EF-1_beta_acid PF10587.9 RKO88455.1 - 1.4 9.4 4.3 2.9 8.4 4.3 1.6 1 0 0 1 1 1 0 Eukaryotic elongation factor 1 beta central acidic region LBP_BPI_CETP PF01273.25 RKO88456.1 - 0.028 14.0 0.2 0.052 13.1 0.2 1.5 1 0 0 1 1 1 0 LBP / BPI / CETP family, N-terminal domain MMM1 PF10296.9 RKO88456.1 - 0.054 12.5 0.2 0.13 11.3 0.1 1.7 1 1 1 2 2 2 0 Maintenance of mitochondrial morphology protein 1 RPN7 PF10602.9 RKO88458.1 - 8.1e-56 188.5 0.6 1.3e-55 187.8 0.6 1.3 1 0 0 1 1 1 1 26S proteasome subunit RPN7 PCI PF01399.27 RKO88458.1 - 2.1e-15 57.1 0.0 5.6e-14 52.5 0.0 2.6 2 1 1 3 3 3 1 PCI domain TPR_2 PF07719.17 RKO88458.1 - 0.062 13.5 0.1 0.24 11.6 0.1 2.1 1 0 0 1 1 1 0 Tetratricopeptide repeat Methyltransf_PK PF05891.12 RKO88458.1 - 0.086 12.3 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase HSCB_C PF07743.13 RKO88458.1 - 0.087 13.3 1.8 0.32 11.5 1.8 2.0 1 0 0 1 1 1 0 HSCB C-terminal oligomerisation domain CitX PF03802.14 RKO88458.1 - 0.17 11.6 0.2 0.43 10.3 0.1 1.6 2 0 0 2 2 2 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DUF4366 PF14283.6 RKO88459.1 - 0.0067 16.5 0.0 0.017 15.2 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4366) Metallophos PF00149.28 RKO88460.1 - 2.4e-27 96.8 0.0 2.9e-27 96.5 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF4581 PF15167.6 RKO88460.1 - 0.059 13.5 0.2 1.1 9.4 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4581) TMEM89 PF15098.6 RKO88461.1 - 0.0082 16.3 0.1 0.016 15.3 0.1 1.4 1 0 0 1 1 1 1 TMEM89 protein family Syndecan PF01034.20 RKO88462.1 - 0.0029 17.5 0.3 0.0048 16.8 0.3 1.2 1 0 0 1 1 1 1 Syndecan domain EphA2_TM PF14575.6 RKO88462.1 - 0.095 13.6 0.0 0.19 12.6 0.0 1.5 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain Shisa PF13908.6 RKO88462.1 - 0.6 10.3 0.0 0.6 10.3 0.0 2.4 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator DUF4713 PF15831.5 RKO88462.1 - 1.2 9.6 5.8 1.9 9.0 5.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4713) HTH_47 PF16221.5 RKO88463.1 - 0.078 12.6 0.0 0.19 11.3 0.0 1.6 1 0 0 1 1 1 0 winged helix-turn-helix RVT_2 PF07727.14 RKO88464.1 - 0.022 14.4 0.0 0.028 14.1 0.0 1.1 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) Peptidase_M20 PF01546.28 RKO88466.1 - 2.6e-38 131.8 0.2 3.5e-38 131.4 0.2 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 RKO88466.1 - 5.9e-13 48.7 0.0 1.1e-12 47.9 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 RKO88466.1 - 7.6e-05 22.5 0.0 0.00013 21.7 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M28 PQQ_2 PF13360.6 RKO88467.1 - 4.7e-16 59.1 0.0 1.3e-15 57.7 0.0 2.1 1 1 0 1 1 1 1 PQQ-like domain PQQ PF01011.21 RKO88467.1 - 4.4e-14 51.6 0.0 0.0019 18.0 0.1 4.1 4 0 0 4 4 4 3 PQQ enzyme repeat PQQ_3 PF13570.6 RKO88467.1 - 1.1e-05 25.7 0.1 7.4 7.2 0.0 4.5 4 1 0 4 4 4 2 PQQ-like domain HMA PF00403.26 RKO88469.1 - 0.0012 19.3 0.1 0.0025 18.2 0.1 1.6 1 0 0 1 1 1 1 Heavy-metal-associated domain LRR_4 PF12799.7 RKO88470.1 - 1.3e-07 31.8 0.0 0.78 10.3 0.0 4.8 4 2 2 6 6 6 4 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 RKO88470.1 - 1.3e-05 24.8 0.0 11 6.3 0.0 5.4 5 0 0 5 5 5 2 Leucine Rich repeat LRR_1 PF00560.33 RKO88470.1 - 0.039 14.5 3.3 1e+02 4.0 0.0 5.8 7 0 0 7 7 7 0 Leucine Rich Repeat RHH_6 PF16762.5 RKO88472.1 - 0.082 13.5 0.0 0.17 12.5 0.0 1.4 1 0 0 1 1 1 0 Ribbon-helix-helix domain MARVEL PF01284.23 RKO88475.1 - 1 9.4 15.3 5 7.2 15.3 1.9 1 1 0 1 1 1 0 Membrane-associating domain Pkinase PF00069.25 RKO88477.1 - 4e-19 69.0 0.0 6.1e-19 68.4 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO88477.1 - 1e-05 25.0 0.0 1.7e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase IQ PF00612.27 RKO88478.1 - 0.00026 20.5 2.5 0.02 14.7 0.0 2.5 2 0 0 2 2 2 2 IQ calmodulin-binding motif ABC_tran PF00005.27 RKO88480.1 - 3.9e-08 33.9 0.1 5.1e-08 33.5 0.1 1.2 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 RKO88480.1 - 6.8e-07 29.3 0.1 8.8e-07 29.0 0.1 1.1 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 RKO88480.1 - 0.0051 16.9 0.3 0.0091 16.1 0.3 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_25 PF13481.6 RKO88480.1 - 0.0056 16.3 0.1 0.017 14.7 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 RKO88480.1 - 0.017 15.5 0.1 0.018 15.4 0.1 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 RKO88480.1 - 0.026 14.2 0.2 0.045 13.5 0.2 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 RKO88480.1 - 0.037 14.5 0.1 0.039 14.4 0.1 1.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 RKO88480.1 - 0.037 13.9 0.1 0.052 13.5 0.1 1.2 1 0 0 1 1 1 0 NACHT domain AAA_21 PF13304.6 RKO88480.1 - 0.038 13.8 0.3 0.049 13.4 0.3 1.1 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_28 PF13521.6 RKO88480.1 - 0.045 14.0 0.1 0.063 13.5 0.1 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 RKO88480.1 - 0.067 13.5 0.1 0.1 12.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain DUF2791 PF10923.8 RKO88480.1 - 0.11 11.3 0.1 0.14 11.0 0.1 1.1 1 0 0 1 1 1 0 P-loop Domain of unknown function (DUF2791) FeoB_N PF02421.18 RKO88480.1 - 0.17 11.4 0.2 0.26 10.8 0.2 1.3 1 0 0 1 1 1 0 Ferrous iron transport protein B cobW PF02492.19 RKO88480.1 - 0.18 11.4 0.1 0.25 10.9 0.1 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_35 PF14516.6 RKO88480.1 - 0.32 9.8 0.0 0.39 9.5 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain ABC_membrane PF00664.23 RKO88481.1 - 1.1e-30 107.2 21.9 9.6e-19 68.1 10.1 3.3 2 1 0 3 3 3 3 ABC transporter transmembrane region ABC_tran PF00005.27 RKO88481.1 - 2e-07 31.6 0.0 3.6e-07 30.8 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 RKO88481.1 - 0.019 14.7 0.2 0.05 13.3 0.2 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 RKO88481.1 - 0.025 15.1 0.5 0.054 14.0 0.5 1.5 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 RKO88481.1 - 0.032 14.3 0.4 0.078 13.1 0.4 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 RKO88481.1 - 0.073 13.0 0.2 0.15 12.0 0.2 1.4 1 0 0 1 1 1 0 RsgA GTPase SMC_N PF02463.19 RKO88481.1 - 0.15 11.4 0.3 0.29 10.5 0.3 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Complex1_LYR PF05347.15 RKO88485.1 - 0.017 15.1 1.8 0.32 11.1 0.1 2.7 2 0 0 2 2 2 0 Complex 1 protein (LYR family) ThiF PF00899.21 RKO88486.1 - 1.6e-71 240.5 0.0 2.1e-71 240.1 0.0 1.1 1 0 0 1 1 1 1 ThiF family UBA_e1_thiolCys PF10585.9 RKO88486.1 - 2e-13 50.8 0.3 1.5e-07 31.7 0.1 2.3 1 1 0 2 2 2 2 Ubiquitin-activating enzyme active site UAE_UbL PF14732.6 RKO88486.1 - 2.4e-09 37.7 0.0 6.4e-09 36.3 0.0 1.8 1 0 0 1 1 1 1 Ubiquitin/SUMO-activating enzyme ubiquitin-like domain NAD_binding_7 PF13241.6 RKO88486.1 - 3e-05 24.4 0.0 9.7e-05 22.8 0.0 1.8 1 0 0 1 1 1 1 Putative NAD(P)-binding Shikimate_DH PF01488.20 RKO88486.1 - 0.00062 19.8 0.1 0.0013 18.8 0.1 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Pyr_redox PF00070.27 RKO88486.1 - 0.019 15.5 0.1 0.12 12.9 0.0 2.4 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 RKO88486.1 - 0.13 11.4 0.0 0.26 10.5 0.0 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Sacchrp_dh_NADP PF03435.18 RKO88486.1 - 0.18 12.1 0.5 1.7 8.9 0.5 2.4 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain BRO1 PF03097.18 RKO88487.1 - 4.6e-18 65.2 0.0 5.6e-18 64.9 0.0 1.0 1 0 0 1 1 1 1 BRO1-like domain BRO1 PF03097.18 RKO88488.1 - 2.7e-31 108.8 0.9 2.9e-31 108.7 0.9 1.0 1 0 0 1 1 1 1 BRO1-like domain TPR_11 PF13414.6 RKO88489.1 - 0.04 13.6 0.4 0.099 12.4 0.4 1.7 1 0 0 1 1 1 0 TPR repeat TPR_7 PF13176.6 RKO88489.1 - 0.077 13.1 1.2 0.22 11.7 0.4 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF3248 PF11609.8 RKO88489.1 - 0.14 12.1 0.0 0.3 11.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3248) TPR_14 PF13428.6 RKO88489.1 - 0.14 13.0 1.6 3.3 8.8 0.3 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat F-box-like PF12937.7 RKO88490.1 - 2.9e-07 30.3 0.4 5.6e-07 29.4 0.4 1.5 1 0 0 1 1 1 1 F-box-like F-box_5 PF18511.1 RKO88490.1 - 0.091 12.3 1.1 0.22 11.1 1.1 1.6 1 0 0 1 1 1 0 F-box Aldo_ket_red PF00248.21 RKO88491.1 - 0.069 12.3 0.0 0.081 12.1 0.0 1.0 1 0 0 1 1 1 0 Aldo/keto reductase family AAR2 PF05282.11 RKO88492.1 - 1.2e-75 255.2 0.0 2.6e-75 254.0 0.0 1.5 1 1 0 1 1 1 1 AAR2 protein Methyltransf_8 PF05148.15 RKO88492.1 - 0.045 13.6 0.0 0.071 12.9 0.0 1.2 1 0 0 1 1 1 0 Hypothetical methyltransferase ALO PF04030.14 RKO88493.1 - 2.8e-73 246.9 0.1 3.6e-73 246.6 0.1 1.1 1 0 0 1 1 1 1 D-arabinono-1,4-lactone oxidase FAD_binding_4 PF01565.23 RKO88493.1 - 1.3e-28 99.5 0.1 1.9e-28 99.0 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain DUF4292 PF14125.6 RKO88493.1 - 0.17 11.6 0.0 0.4 10.3 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4292) SepZ PF06066.11 RKO88493.1 - 0.22 11.8 2.6 0.51 10.6 0.6 2.1 1 1 1 2 2 2 0 SepZ DUF3591 PF12157.8 RKO88494.1 - 2.1e-152 507.9 0.4 2.5e-152 507.6 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3591) TFIIF_beta PF02270.15 RKO88494.1 - 0.0045 17.1 0.2 0.0088 16.2 0.2 1.5 1 0 0 1 1 1 1 TFIIF, beta subunit HTH domain Bromodomain PF00439.25 RKO88495.1 - 2.8e-14 52.9 0.0 5e-14 52.1 0.0 1.4 1 0 0 1 1 1 1 Bromodomain HC2 PF07382.11 RKO88496.1 - 0.35 10.9 56.9 0.76 9.8 56.9 1.5 1 1 0 1 1 1 0 Histone H1-like nucleoprotein HC2 SlyX PF04102.12 RKO88497.1 - 0.00067 20.2 1.4 0.00067 20.2 1.4 2.7 2 0 0 2 2 2 1 SlyX Atg14 PF10186.9 RKO88497.1 - 0.0037 16.4 0.2 0.0063 15.6 0.2 1.4 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 Peptidase_S10 PF00450.22 RKO88497.1 - 0.0064 15.9 0.0 0.0091 15.4 0.0 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase ADIP PF11559.8 RKO88497.1 - 0.099 12.7 1.1 0.18 11.9 0.5 1.7 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding Cep57_CLD_2 PF14197.6 RKO88497.1 - 0.14 12.2 3.4 0.29 11.2 3.4 1.5 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 ERM PF00769.19 RKO88497.1 - 1.5 8.5 9.0 0.14 12.0 3.4 1.8 2 0 0 2 2 2 0 Ezrin/radixin/moesin family Csm1_N PF18504.1 RKO88497.1 - 2.1 8.8 6.7 0.22 11.9 0.4 2.2 2 0 0 2 2 2 0 Csm1 N-terminal domain Mod_r PF07200.13 RKO88497.1 - 2.2 8.4 4.6 0.28 11.3 0.5 1.6 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein DUF2968 PF11180.8 RKO88497.1 - 4.5 6.9 6.1 1.8 8.2 1.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) KASH_CCD PF14662.6 RKO88497.1 - 6.5 6.5 10.1 0.25 11.1 0.5 2.3 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH AHJR-like PF18743.1 RKO88499.1 - 0.12 12.0 0.0 0.17 11.4 0.0 1.2 1 0 0 1 1 1 0 REase_AHJR-like IGFBP PF00219.18 RKO88500.1 - 0.00023 21.7 31.1 4.2 8.1 0.5 7.1 6 0 0 6 6 6 5 Insulin-like growth factor binding protein TSGP1 PF07771.11 RKO88500.1 - 0.0077 16.4 17.5 2.1 8.5 0.5 5.3 3 1 1 5 5 5 4 Tick salivary peptide group 1 DUF2148 PF09918.9 RKO88500.1 - 0.032 14.3 0.0 0.064 13.3 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein containing a ferredoxin domain (DUF2148) CDC45 PF02724.14 RKO88501.1 - 1.2e-22 80.1 0.0 1.4e-22 79.8 0.0 1.1 1 0 0 1 1 1 1 CDC45-like protein SelK_SelG PF10961.8 RKO88501.1 - 0.94 10.1 7.0 2.4 8.8 7.0 1.7 1 0 0 1 1 1 0 Selenoprotein SelK_SelG TRAP_beta PF05753.14 RKO88502.1 - 1.4e-23 83.3 2.2 6.5e-23 81.0 2.2 1.8 1 1 0 1 1 1 1 Translocon-associated protein beta (TRAPB) DUF11 PF01345.18 RKO88502.1 - 0.00051 20.3 1.4 0.00098 19.4 1.4 1.7 1 1 0 1 1 1 1 Domain of unknown function DUF11 MBF2 PF15868.5 RKO88502.1 - 0.0065 17.0 0.0 0.014 15.9 0.0 1.5 1 0 0 1 1 1 1 Transcription activator MBF2 Ras PF00071.22 RKO88504.1 - 2.7e-34 118.1 0.0 3.2e-34 117.9 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO88504.1 - 1.8e-18 66.9 0.0 2.7e-18 66.3 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO88504.1 - 2.7e-08 33.5 0.0 3.3e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 RKO88504.1 - 0.0097 16.0 0.1 0.016 15.3 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA PF00004.29 RKO88504.1 - 0.029 14.8 0.0 0.061 13.7 0.0 1.6 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 RKO88504.1 - 0.18 11.9 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain MIF4G PF02854.19 RKO88506.1 - 1.4e-37 129.4 0.0 1.6e-37 129.2 0.0 1.0 1 0 0 1 1 1 1 MIF4G domain Peptidase_S8 PF00082.22 RKO88507.1 - 6.2e-35 120.9 11.6 1.2e-34 120.0 11.6 1.4 1 1 0 1 1 1 1 Subtilase family Peptidase_S8 PF00082.22 RKO88508.1 - 3.3e-35 121.8 10.3 6.1e-35 120.9 10.3 1.3 1 1 0 1 1 1 1 Subtilase family Diphthami_syn_2 PF01902.17 RKO88509.1 - 8.8e-08 31.9 0.0 1.6e-07 31.1 0.0 1.4 1 1 0 1 1 1 1 Diphthamide synthase HMG_box PF00505.19 RKO88510.1 - 1.5e-13 50.9 1.1 1.8e-13 50.7 0.1 1.6 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.10 RKO88510.1 - 2.7e-09 37.5 0.1 5.3e-09 36.5 0.1 1.4 1 0 0 1 1 1 1 HMG-box domain YABBY PF04690.13 RKO88510.1 - 0.16 12.5 0.0 0.17 12.4 0.0 1.1 1 0 0 1 1 1 0 YABBY protein VPS28 PF03997.12 RKO88511.1 - 6.2e-55 185.8 0.0 7.7e-55 185.5 0.0 1.0 1 0 0 1 1 1 1 VPS28 protein Kinesin PF00225.23 RKO88512.1 - 7e-34 117.2 0.0 1e-33 116.7 0.0 1.2 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO88512.1 - 1e-13 51.5 0.0 8.1e-09 35.6 0.0 2.4 2 0 0 2 2 2 2 Microtubule binding PKcGMP_CC PF16808.5 RKO88512.1 - 0.19 11.6 2.8 7.5 6.5 0.1 3.1 3 0 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase TMF_DNA_bd PF12329.8 RKO88512.1 - 0.2 11.7 0.1 10 6.2 0.1 2.9 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding UPF0242 PF06785.11 RKO88512.1 - 0.24 11.5 0.6 8.7 6.4 0.0 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus TolA_bind_tri PF16331.5 RKO88512.1 - 0.97 9.5 5.6 2.9 8.0 0.3 3.2 2 1 0 2 2 2 0 TolA binding protein trimerisation TPR_MLP1_2 PF07926.12 RKO88512.1 - 2.1 8.4 6.4 1.3 9.0 0.3 2.7 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein Atg14 PF10186.9 RKO88512.1 - 2.6 7.1 7.8 9.7 5.2 2.5 2.2 1 1 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4201 PF13870.6 RKO88512.1 - 2.6 7.7 4.8 1.6 8.5 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4201) SOBP PF15279.6 RKO88512.1 - 2.9 8.4 11.2 6.3 7.3 11.2 1.5 1 0 0 1 1 1 0 Sine oculis-binding protein DASH_Hsk3 PF08227.11 RKO88512.1 - 6.1 7.3 10.6 1 9.8 2.1 3.4 3 1 0 3 3 3 0 DASH complex subunit Hsk3 like Helicase_C PF00271.31 RKO88513.1 - 5.8e-21 74.9 0.1 6.2e-21 74.8 0.1 1.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DUF4551 PF15087.6 RKO88514.1 - 1.3 7.8 3.6 1.6 7.5 3.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) Peptidase_S8 PF00082.22 RKO88516.1 - 1.4e-35 123.0 10.1 4.1e-35 121.5 10.1 1.6 1 1 0 1 1 1 1 Subtilase family Inhibitor_I9 PF05922.16 RKO88516.1 - 7e-06 26.6 0.0 1.4e-05 25.7 0.0 1.5 1 0 0 1 1 1 1 Peptidase inhibitor I9 RRM_1 PF00076.22 RKO88517.1 - 1.3e-18 66.5 0.1 1.7e-18 66.2 0.1 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 RKO88517.1 - 0.00029 20.9 0.0 0.00034 20.7 0.0 1.2 1 1 0 1 1 1 1 RNA recognition motif RrnaAD PF00398.20 RKO88519.1 - 6.2e-64 215.6 0.0 8.1e-64 215.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 RKO88519.1 - 7.4e-06 26.6 0.0 1.5e-05 25.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 RKO88519.1 - 0.0016 18.2 0.0 0.0028 17.4 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_11 PF08241.12 RKO88519.1 - 0.0018 18.9 0.0 0.0041 17.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_28 PF02636.17 RKO88519.1 - 0.0085 15.7 0.0 0.014 15.1 0.0 1.3 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_23 PF13489.6 RKO88519.1 - 0.023 14.5 0.0 0.035 13.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 RKO88519.1 - 0.04 13.2 0.0 0.068 12.5 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.18 RKO88519.1 - 0.042 13.2 0.0 0.072 12.4 0.0 1.3 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family MTS PF05175.14 RKO88519.1 - 0.045 13.3 0.0 0.067 12.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_12 PF08242.12 RKO88519.1 - 0.066 14.0 0.0 0.13 13.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Met_10 PF02475.16 RKO88519.1 - 0.12 12.1 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein MRP-L28 PF09812.9 RKO88520.1 - 4.8e-09 36.5 0.0 5.7e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial ribosomal protein L28 Vps26 PF03643.15 RKO88521.1 - 1.4e-97 326.0 3.3 1.7e-97 325.7 3.3 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 26 Arrestin_C PF02752.22 RKO88521.1 - 0.0011 19.4 0.1 0.0056 17.1 0.1 2.4 1 1 1 2 2 2 1 Arrestin (or S-antigen), C-terminal domain Arrestin_N PF00339.29 RKO88521.1 - 0.017 15.2 1.2 0.31 11.1 0.4 2.9 1 1 0 2 2 2 0 Arrestin (or S-antigen), N-terminal domain HNH_repeat PF18780.1 RKO88522.1 - 0.029 14.2 0.1 0.029 14.2 0.1 1.7 2 0 0 2 2 2 0 Homing endonuclease repeat Actin PF00022.19 RKO88522.1 - 0.054 12.1 0.6 0.06 11.9 0.6 1.1 1 0 0 1 1 1 0 Actin Pyr_redox_2 PF07992.14 RKO88523.1 - 4.8e-59 200.0 1.5 6.6e-59 199.5 1.5 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 RKO88523.1 - 1.4e-32 112.2 0.4 3.9e-32 110.8 0.2 1.9 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 RKO88523.1 - 3.9e-17 62.6 2.7 1.4e-14 54.4 0.1 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 RKO88523.1 - 2.9e-11 43.2 2.0 1.4e-10 41.0 2.0 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 RKO88523.1 - 2.2e-05 24.0 0.6 7.1e-05 22.3 0.1 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 RKO88523.1 - 3.4e-05 23.3 1.5 0.091 12.0 0.5 2.5 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 RKO88523.1 - 7.1e-05 22.2 0.8 2.5 7.4 0.0 3.2 3 0 0 3 3 3 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FAD_binding_2 PF00890.24 RKO88523.1 - 0.00016 20.9 1.4 0.00027 20.1 1.4 1.4 1 0 0 1 1 1 1 FAD binding domain 3HCDH_N PF02737.18 RKO88523.1 - 0.00025 21.0 4.1 0.0058 16.5 0.1 2.4 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GIDA PF01134.22 RKO88523.1 - 0.00052 19.2 2.0 0.00052 19.2 2.0 2.2 2 1 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_8 PF13450.6 RKO88523.1 - 0.0016 18.7 2.6 0.0055 16.9 2.6 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 RKO88523.1 - 0.0016 17.2 1.6 0.0095 14.7 0.4 2.5 3 0 0 3 3 3 1 HI0933-like protein Thi4 PF01946.17 RKO88523.1 - 0.012 14.9 0.9 0.27 10.4 0.2 2.7 3 0 0 3 3 3 0 Thi4 family NAD_binding_7 PF13241.6 RKO88523.1 - 0.012 16.0 0.3 1.5 9.3 0.0 2.5 2 0 0 2 2 2 0 Putative NAD(P)-binding DAO PF01266.24 RKO88523.1 - 0.019 14.6 0.2 0.019 14.6 0.2 2.4 3 0 0 3 3 3 0 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 RKO88523.1 - 0.078 12.2 0.6 0.77 8.9 0.2 2.1 2 0 0 2 2 2 0 FAD binding domain UDPG_MGDP_dh_N PF03721.14 RKO88523.1 - 0.18 11.3 2.5 0.62 9.6 0.0 2.5 3 0 0 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RGS PF00615.19 RKO88526.1 - 0.00038 20.7 0.0 0.0023 18.2 0.0 1.9 2 0 0 2 2 2 1 Regulator of G protein signaling domain 7tm_3 PF00003.22 RKO88526.1 - 0.0023 17.7 6.3 0.0028 17.4 0.3 2.2 2 0 0 2 2 2 2 7 transmembrane sweet-taste receptor of 3 GCPR TPR_2 PF07719.17 RKO88527.1 - 8.5e-06 25.5 1.0 0.015 15.4 0.5 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 RKO88527.1 - 2e-05 24.2 0.8 0.0037 17.0 0.3 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 RKO88527.1 - 0.0042 17.3 2.3 0.0042 17.3 2.3 1.7 2 0 0 2 2 2 1 Tetratricopeptide repeat CDC37_N PF03234.14 RKO88527.1 - 0.071 14.0 0.1 0.071 14.0 0.1 2.0 3 0 0 3 3 3 0 Cdc37 N terminal kinase binding TPR_8 PF13181.6 RKO88527.1 - 0.13 12.5 0.3 19 5.8 0.1 2.8 2 1 0 2 2 2 0 Tetratricopeptide repeat DUF5089 PF17002.5 RKO88528.1 - 0.27 11.1 9.4 0.4 10.5 9.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5089) YjbH PF06082.11 RKO88528.1 - 4.2 6.1 6.2 5.7 5.6 6.2 1.1 1 0 0 1 1 1 0 Exopolysaccharide biosynthesis protein YbjH DUF1631 PF07793.11 RKO88530.1 - 0.071 11.5 0.4 0.079 11.4 0.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) RILP PF11461.8 RKO88534.1 - 0.0019 18.4 7.7 0.32 11.2 0.2 4.3 2 2 2 4 4 4 2 Rab interacting lysosomal protein TAP42 PF04177.12 RKO88534.1 - 0.036 13.2 8.2 0.008 15.3 4.4 1.8 2 0 0 2 2 2 0 TAP42-like family CDC27 PF09507.10 RKO88534.1 - 0.041 13.3 4.4 0.066 12.6 4.4 1.3 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Pox_Ag35 PF03286.14 RKO88534.1 - 0.3 10.8 6.5 0.51 10.1 5.0 2.1 2 0 0 2 2 2 0 Pox virus Ag35 surface protein DUF4604 PF15377.6 RKO88534.1 - 0.66 10.4 9.3 1.5 9.2 9.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) Methyltransf_23 PF13489.6 RKO88535.1 - 1.4e-06 28.3 0.0 2.5e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 RKO88535.1 - 1.5e-06 28.9 0.1 8e-06 26.5 0.1 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 RKO88535.1 - 2.3e-06 28.2 0.1 0.00014 22.5 0.1 2.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO88535.1 - 2e-05 24.4 0.0 5e-05 23.1 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 RKO88535.1 - 0.00018 22.1 0.1 0.0027 18.3 0.1 2.4 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 RKO88535.1 - 0.0056 16.2 0.0 0.0084 15.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_32 PF13679.6 RKO88535.1 - 0.018 15.0 0.0 0.026 14.5 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain MetW PF07021.12 RKO88535.1 - 0.057 13.0 0.8 0.09 12.4 0.1 1.6 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW FtsJ PF01728.19 RKO88535.1 - 0.13 12.4 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase AdoMet_MTase PF07757.13 RKO88535.1 - 0.14 12.5 0.0 0.92 9.9 0.0 2.0 2 0 0 2 2 2 0 Predicted AdoMet-dependent methyltransferase Methyltransf_18 PF12847.7 RKO88535.1 - 0.25 11.3 0.0 0.37 10.7 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain DUF3449 PF11931.8 RKO88537.1 - 1.6e-56 191.0 0.1 1.6e-56 191.0 0.1 2.4 3 0 0 3 3 3 1 Domain of unknown function (DUF3449) SF3A3 PF16837.5 RKO88537.1 - 5.5e-25 87.7 2.4 5.5e-25 87.7 2.4 2.1 2 0 0 2 2 2 1 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 SF3a60_bindingd PF12108.8 RKO88537.1 - 6.2e-13 48.4 0.5 1.2e-12 47.5 0.5 1.5 1 0 0 1 1 1 1 Splicing factor SF3a60 binding domain zf-C2H2_jaz PF12171.8 RKO88537.1 - 4.8e-09 36.3 1.4 4.8e-09 36.3 1.4 2.1 3 0 0 3 3 3 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 RKO88537.1 - 1.7e-08 34.5 2.1 1.3e-05 25.4 0.7 2.4 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 RKO88537.1 - 0.0016 18.7 0.7 0.0043 17.4 0.0 2.1 2 0 0 2 2 2 1 C2H2 type zinc-finger (2 copies) Sec16 PF12932.7 RKO88537.1 - 0.061 13.9 0.2 0.14 12.8 0.2 1.6 1 0 0 1 1 1 0 Vesicle coat trafficking protein Sec16 mid-region Ribosom_S12_S23 PF00164.25 RKO88538.1 - 6.8e-48 161.0 0.4 9.5e-48 160.6 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 CM1 PF03026.15 RKO88539.1 - 0.13 11.6 0.1 0.26 10.6 0.0 1.5 2 0 0 2 2 2 0 Influenza C virus M1 protein Clat_adaptor_s PF01217.20 RKO88540.1 - 9.4e-07 28.9 0.1 1.2e-06 28.5 0.1 1.2 1 0 0 1 1 1 1 Clathrin adaptor complex small chain AP-5_subunit_s1 PF15001.6 RKO88540.1 - 0.11 12.5 0.2 0.11 12.5 0.2 2.0 2 0 0 2 2 2 0 AP-5 complex subunit sigma-1 VWA_2 PF13519.6 RKO88541.1 - 0.035 14.7 0.0 0.059 14.0 0.0 1.4 1 0 0 1 1 1 0 von Willebrand factor type A domain RHD3 PF05879.12 RKO88542.1 - 8.3e-46 156.5 0.1 1.4e-45 155.8 0.0 1.3 2 0 0 2 2 2 1 Root hair defective 3 GTP-binding protein (RHD3) Band_7_1 PF13421.6 RKO88542.1 - 0.12 12.0 0.1 0.43 10.2 0.1 1.8 1 1 0 2 2 2 0 SPFH domain-Band 7 family U-box PF04564.15 RKO88543.1 - 0.00026 21.1 0.1 0.00056 20.0 0.1 1.5 1 0 0 1 1 1 1 U-box domain Myb_DNA-binding PF00249.31 RKO88543.1 - 0.00065 19.8 0.0 0.0013 18.9 0.0 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain OPT PF03169.15 RKO88547.1 - 7.8e-119 398.0 38.6 8.8e-119 397.9 38.6 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein E1-E2_ATPase PF00122.20 RKO88547.1 - 0.51 9.8 8.8 5.8 6.4 3.0 2.4 2 0 0 2 2 2 0 E1-E2 ATPase Sad1_UNC PF07738.13 RKO88549.1 - 3.2e-12 46.6 0.0 6.3e-12 45.6 0.0 1.4 1 0 0 1 1 1 1 Sad1 / UNC-like C-terminal PKHD_C PF18331.1 RKO88549.1 - 0.0058 16.7 0.9 0.018 15.1 0.9 1.9 1 0 0 1 1 1 1 PKHD-type hydroxylase C-terminal domain Tyrosinase PF00264.20 RKO88550.1 - 1.2e-18 68.3 3.3 3.5e-18 66.7 3.3 1.8 1 1 0 1 1 1 1 Common central domain of tyrosinase PRIMA1 PF16101.5 RKO88550.1 - 0.007 16.4 0.9 0.011 15.7 0.9 1.2 1 0 0 1 1 1 1 Proline-rich membrane anchor 1 Sdh5 PF03937.16 RKO88550.1 - 0.023 14.7 0.1 0.066 13.2 0.1 1.7 2 0 0 2 2 2 0 Flavinator of succinate dehydrogenase F-box-like PF12937.7 RKO88551.1 - 4.9e-06 26.3 2.7 1.3e-05 25.0 1.6 2.4 2 0 0 2 2 2 1 F-box-like Cytochrom_B561 PF03188.16 RKO88554.1 - 0.0015 18.6 0.0 0.0023 18.1 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic cytochrome b561 PRA1 PF03208.19 RKO88554.1 - 0.045 13.4 0.3 0.065 12.9 0.3 1.2 1 0 0 1 1 1 0 PRA1 family protein Lgl_C PF08596.10 RKO88555.1 - 6.3e-07 28.4 0.0 2.5e-06 26.4 0.0 1.9 2 0 0 2 2 2 1 Lethal giant larvae(Lgl) like, C-terminal ANAPC4_WD40 PF12894.7 RKO88555.1 - 0.015 15.6 0.0 1.1 9.6 0.0 3.5 3 1 1 4 4 4 0 Anaphase-promoting complex subunit 4 WD40 domain Hira PF07569.11 RKO88555.1 - 0.084 12.6 0.0 0.97 9.1 0.0 2.3 2 0 0 2 2 2 0 TUP1-like enhancer of split WD40 PF00400.32 RKO88555.1 - 2 9.4 3.5 41 5.3 0.0 3.9 4 0 0 4 4 4 0 WD domain, G-beta repeat RhoGAP PF00620.27 RKO88556.1 - 1.3e-38 132.2 0.0 1.6e-38 131.9 0.0 1.0 1 0 0 1 1 1 1 RhoGAP domain CtnDOT_TraJ PF07863.11 RKO88558.1 - 0.29 11.8 2.7 0.65 10.7 2.7 1.6 1 0 0 1 1 1 0 Homologues of TraJ from Bacteroides conjugative transposon PNRC PF15365.6 RKO88559.1 - 0.0054 16.5 0.1 0.0054 16.5 0.1 3.5 3 0 0 3 3 3 1 Proline-rich nuclear receptor coactivator motif FUN14 PF04930.15 RKO88561.1 - 4.2e-21 75.2 1.3 5.2e-21 74.9 1.3 1.1 1 0 0 1 1 1 1 FUN14 family EF-hand_1 PF00036.32 RKO88561.1 - 0.13 11.9 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 EF hand DUF1360 PF07098.11 RKO88562.1 - 0.24 11.4 0.3 1.7 8.7 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1360) SR-25 PF10500.9 RKO88562.1 - 7.2 6.2 23.5 20 4.7 23.5 1.6 1 1 0 1 1 1 0 Nuclear RNA-splicing-associated protein DUF4449 PF14613.6 RKO88563.1 - 3.8e-10 40.1 0.2 8.2e-10 39.0 0.2 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF4449) AAA_8 PF12780.7 RKO88563.1 - 0.14 11.5 0.0 0.31 10.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region D4 Peptidase_S9 PF00326.21 RKO88564.1 - 5.5e-60 202.5 0.1 6.8e-60 202.1 0.1 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase family Esterase PF00756.20 RKO88564.1 - 0.005 16.5 0.0 0.0062 16.2 0.0 1.2 1 0 0 1 1 1 1 Putative esterase Abhydrolase_3 PF07859.13 RKO88564.1 - 0.026 14.4 0.0 0.037 13.9 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold Death PF00531.22 RKO88565.1 - 0.14 12.3 0.5 1.2 9.3 0.0 2.6 3 0 0 3 3 3 0 Death domain PI-PLC-Y PF00387.19 RKO88566.1 - 5.5e-34 117.0 0.4 9.5e-34 116.2 0.4 1.3 1 0 0 1 1 1 1 Phosphatidylinositol-specific phospholipase C, Y domain zf-C2H2_jaz PF12171.8 RKO88566.1 - 0.0025 18.1 0.0 0.0045 17.3 0.0 1.5 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 RKO88566.1 - 0.0025 18.1 0.2 0.0055 17.1 0.2 1.5 1 0 0 1 1 1 1 Zinc-finger of C2H2 type Pirin_C PF05726.13 RKO88569.1 - 1.3e-32 112.2 0.0 1.4e-30 105.7 0.0 2.4 3 0 0 3 3 3 1 Pirin C-terminal cupin domain Pirin PF02678.16 RKO88569.1 - 1.1e-30 105.8 0.0 2e-30 104.9 0.0 1.5 1 0 0 1 1 1 1 Pirin Cupin_2 PF07883.11 RKO88569.1 - 0.0013 18.3 2.8 0.04 13.6 0.3 3.1 3 0 0 3 3 3 1 Cupin domain PseudoU_synth_1 PF01416.20 RKO88570.1 - 3.7e-29 101.3 0.0 1.5e-26 92.9 0.0 2.6 2 1 0 2 2 2 2 tRNA pseudouridine synthase DUF1077 PF06417.12 RKO88571.1 - 8.1e-24 83.9 3.5 1.1e-23 83.5 3.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1077) Peptidase_M48 PF01435.18 RKO88571.1 - 0.16 11.7 0.0 0.23 11.2 0.0 1.1 1 0 0 1 1 1 0 Peptidase family M48 LRR_4 PF12799.7 RKO88572.1 - 1.9e-18 66.3 43.9 3.2e-08 33.7 0.1 8.3 6 2 4 10 10 10 7 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO88572.1 - 2.1e-11 43.4 35.1 0.0014 18.4 0.4 5.8 4 1 1 5 5 5 5 Leucine rich repeat LRR_9 PF14580.6 RKO88572.1 - 4.2e-09 36.2 1.3 4.2e-09 36.2 1.3 4.0 2 1 2 4 4 4 2 Leucine-rich repeat IQ PF00612.27 RKO88572.1 - 5.5e-08 31.9 12.9 0.0053 16.4 0.3 3.9 3 0 0 3 3 3 3 IQ calmodulin-binding motif LRR_1 PF00560.33 RKO88572.1 - 0.41 11.4 27.9 25 5.9 0.1 9.1 9 1 0 9 9 9 0 Leucine Rich Repeat LRR_6 PF13516.6 RKO88572.1 - 3.9 7.8 19.0 3.4 7.9 0.0 6.8 8 0 0 8 8 8 0 Leucine Rich repeat OPT PF03169.15 RKO88573.1 - 1.2e-147 493.2 37.0 1.4e-147 493.0 37.0 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein E1-E2_ATPase PF00122.20 RKO88573.1 - 0.25 10.8 2.0 0.68 9.4 2.0 1.6 1 0 0 1 1 1 0 E1-E2 ATPase TPR_19 PF14559.6 RKO88575.1 - 2.1e-14 53.8 10.2 0.02 15.4 0.1 8.4 8 2 1 9 9 9 4 Tetratricopeptide repeat TPR_17 PF13431.6 RKO88575.1 - 9.1e-12 44.5 0.0 0.045 14.1 0.0 7.0 8 0 0 8 8 6 2 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO88575.1 - 2e-11 43.9 1.4 0.00022 21.4 0.1 5.2 5 0 0 5 5 5 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 RKO88575.1 - 6.9e-10 38.9 13.4 4.1 8.5 0.0 10.1 10 1 2 12 12 11 2 Tetratricopeptide repeat TPR_2 PF07719.17 RKO88575.1 - 8e-10 38.1 15.9 0.019 15.0 0.1 9.0 10 0 0 10 10 10 2 Tetratricopeptide repeat TPR_1 PF00515.28 RKO88575.1 - 3.9e-08 32.8 6.8 0.17 11.8 0.0 7.1 7 0 0 7 7 7 1 Tetratricopeptide repeat TPR_11 PF13414.6 RKO88575.1 - 8.3e-08 31.8 1.5 0.13 12.0 0.0 4.8 4 1 1 5 5 5 3 TPR repeat TPR_8 PF13181.6 RKO88575.1 - 1.7e-07 30.9 17.2 0.025 14.8 0.0 8.1 10 0 0 10 10 8 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO88575.1 - 1.1e-05 26.0 7.0 0.33 11.6 0.0 5.6 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_4 PF07721.14 RKO88575.1 - 0.00046 20.6 1.0 0.054 14.1 0.2 4.6 6 0 0 6 6 4 1 Tetratricopeptide repeat NARP1 PF12569.8 RKO88575.1 - 0.0017 17.4 0.7 0.028 13.4 0.1 2.2 2 0 0 2 2 2 1 NMDA receptor-regulated protein 1 TPR_21 PF09976.9 RKO88575.1 - 0.0077 16.0 3.8 2 8.1 0.5 3.7 3 1 1 4 4 4 1 Tetratricopeptide repeat-like domain TPR_9 PF13371.6 RKO88575.1 - 0.024 14.8 7.7 2.8 8.2 0.1 5.9 7 1 0 7 7 7 0 Tetratricopeptide repeat TPR_12 PF13424.6 RKO88575.1 - 0.03 14.6 16.6 3.9 7.9 0.4 5.8 5 1 2 7 7 6 0 Tetratricopeptide repeat TPR_MalT PF17874.1 RKO88575.1 - 0.32 10.3 16.1 1.5 8.1 5.0 4.2 3 2 0 3 3 3 0 MalT-like TPR region TPR_6 PF13174.6 RKO88575.1 - 8.3 7.3 19.0 1.6e+02 3.3 0.1 7.9 10 0 0 10 10 7 0 Tetratricopeptide repeat ECH_2 PF16113.5 RKO88576.1 - 8.8e-88 295.0 0.0 1.2e-87 294.6 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_1 PF00378.20 RKO88576.1 - 3.1e-23 82.4 0.0 5.3e-21 75.1 0.0 2.2 2 0 0 2 2 2 2 Enoyl-CoA hydratase/isomerase GATase_6 PF13522.6 RKO88578.1 - 0.016 15.4 0.0 0.057 13.6 0.0 1.8 2 0 0 2 2 2 0 Glutamine amidotransferase domain CAML PF14963.6 RKO88579.1 - 0.086 12.9 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Calcium signal-modulating cyclophilin ligand DUF3776 PF12618.8 RKO88579.1 - 0.16 12.6 0.3 0.29 11.7 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3776) MPLKIP PF15502.6 RKO88580.1 - 0.0052 17.0 0.2 0.0052 17.0 0.2 3.1 3 0 0 3 3 3 1 M-phase-specific PLK1-interacting protein Tudor_RapA PF18337.1 RKO88581.1 - 0.19 11.9 3.2 0.33 11.2 3.2 1.4 1 0 0 1 1 1 0 RapA N-terminal Tudor like domain CPL PF08144.11 RKO88582.1 - 3.8e-24 85.7 0.0 1.6e-20 73.9 0.0 4.4 4 3 0 4 4 4 2 CPL (NUC119) domain PUF PF00806.19 RKO88582.1 - 0.0011 18.5 0.1 30 4.6 0.0 4.9 5 0 0 5 5 5 2 Pumilio-family RNA binding repeat DUF4745 PF15923.5 RKO88582.1 - 0.19 11.7 1.6 0.31 11.0 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4745) OmpH PF03938.14 RKO88584.1 - 0.47 10.8 6.3 0.74 10.1 6.3 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DDE_Tnp_4 PF13359.6 RKO88588.1 - 0.11 12.1 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 DDE superfamily endonuclease P22_portal PF16510.5 RKO88590.1 - 0.32 9.5 3.7 5.6 5.4 0.5 2.2 2 0 0 2 2 2 0 Phage P22-like portal protein Hydin_ADK PF17213.3 RKO88591.1 - 0.84 9.9 4.3 2 8.6 4.3 1.6 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain GREB1 PF15782.5 RKO88591.1 - 7.8 3.5 6.5 9.2 3.2 6.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Ribonuclease_T2 PF00445.18 RKO88592.1 - 1.2e-34 120.1 0.1 1.5e-34 119.8 0.1 1.1 1 0 0 1 1 1 1 Ribonuclease T2 family SDH_beta PF03315.15 RKO88593.1 - 1.8e-54 184.3 0.0 7.8e-54 182.2 0.0 1.9 2 0 0 2 2 2 1 Serine dehydratase beta chain CH_2 PF06294.11 RKO88594.1 - 4.6e-16 58.7 0.0 9e-16 57.8 0.0 1.5 1 0 0 1 1 1 1 CH-like domain in sperm protein CH PF00307.31 RKO88594.1 - 0.0043 17.2 0.2 0.012 15.7 0.0 1.8 2 0 0 2 2 2 1 Calponin homology (CH) domain peroxidase PF00141.23 RKO88598.1 - 9.7e-34 117.0 0.0 1.4e-33 116.5 0.0 1.2 1 0 0 1 1 1 1 Peroxidase peroxidase PF00141.23 RKO88599.1 - 7.5e-27 94.5 0.0 1.3e-26 93.7 0.0 1.4 1 1 0 1 1 1 1 Peroxidase peroxidase PF00141.23 RKO88600.1 - 7.2e-13 48.8 0.0 7.4e-13 48.7 0.0 1.0 1 0 0 1 1 1 1 Peroxidase Aminotran_1_2 PF00155.21 RKO88601.1 - 4.7e-66 223.4 0.0 1.3e-61 208.8 0.0 2.2 1 1 1 2 2 2 2 Aminotransferase class I and II Aminotran_5 PF00266.19 RKO88601.1 - 3.1e-05 23.1 0.0 5.3e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 RKO88601.1 - 0.0002 20.0 0.0 0.0004 19.0 0.0 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Preseq_ALAS PF09029.10 RKO88601.1 - 0.00031 21.2 4.7 0.00084 19.8 2.5 2.0 1 1 1 2 2 2 1 5-aminolevulinate synthase presequence Beta_elim_lyase PF01212.21 RKO88601.1 - 0.0012 18.2 0.1 0.0019 17.6 0.1 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 RKO88601.1 - 0.11 11.8 1.5 0.44 9.8 1.5 1.8 1 1 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family DUF3405 PF11885.8 RKO88601.1 - 0.2 10.2 0.2 0.28 9.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3405) Y_phosphatase3 PF13350.6 RKO88603.1 - 1.3e-31 110.4 0.1 1.4e-31 110.3 0.1 1.0 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase PF00102.27 RKO88603.1 - 0.0012 18.5 0.0 0.0016 18.0 0.0 1.3 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Init_tRNA_PT PF04179.12 RKO88603.1 - 0.026 14.8 0.1 0.26 11.6 0.1 2.1 1 1 1 2 2 2 0 Rit1 DUSP-like domain DSPc PF00782.20 RKO88603.1 - 0.042 13.6 0.2 0.069 13.0 0.2 1.5 1 1 0 1 1 1 0 Dual specificity phosphatase, catalytic domain Y_phosphatase2 PF03162.13 RKO88603.1 - 0.054 13.1 0.0 0.078 12.6 0.0 1.2 1 0 0 1 1 1 0 Tyrosine phosphatase family Myotub-related PF06602.14 RKO88603.1 - 0.11 11.3 0.0 0.15 10.9 0.0 1.3 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain Y_phosphatase3 PF13350.6 RKO88604.1 - 1.2e-29 104.0 0.0 4e-27 95.7 0.0 2.2 2 0 0 2 2 2 2 Tyrosine phosphatase family Hydrolase_4 PF12146.8 RKO88604.1 - 2.7e-07 30.1 0.6 0.0085 15.4 0.2 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 RKO88604.1 - 0.00011 21.9 0.4 0.00018 21.3 0.4 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Y_phosphatase PF00102.27 RKO88604.1 - 0.012 15.1 0.0 0.03 13.9 0.0 1.6 2 0 0 2 2 2 0 Protein-tyrosine phosphatase Y_phosphatase2 PF03162.13 RKO88604.1 - 0.016 14.8 0.0 0.03 13.9 0.0 1.4 1 0 0 1 1 1 0 Tyrosine phosphatase family Myotub-related PF06602.14 RKO88604.1 - 0.051 12.5 0.0 0.077 11.9 0.0 1.1 1 0 0 1 1 1 0 Myotubularin-like phosphatase domain PTPlike_phytase PF14566.6 RKO88604.1 - 0.064 13.4 0.0 0.17 12.0 0.0 1.6 2 0 0 2 2 2 0 Inositol hexakisphosphate DSPc PF00782.20 RKO88604.1 - 0.09 12.6 0.1 0.16 11.8 0.1 1.3 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain AFG1_ATPase PF03969.16 RKO88606.1 - 8e-64 215.8 0.0 2.8e-62 210.7 0.0 2.7 2 1 0 2 2 2 1 AFG1-like ATPase AAA_16 PF13191.6 RKO88606.1 - 1.9e-07 31.6 0.5 6.6e-05 23.4 0.0 2.6 2 1 1 3 3 3 2 AAA ATPase domain KAP_NTPase PF07693.14 RKO88606.1 - 0.002 17.4 0.0 0.003 16.8 0.0 1.1 1 0 0 1 1 1 1 KAP family P-loop domain AAA_22 PF13401.6 RKO88606.1 - 0.0051 17.1 0.0 0.014 15.7 0.0 1.8 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 RKO88606.1 - 0.016 15.2 0.0 0.027 14.4 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AAA PF00004.29 RKO88606.1 - 0.16 12.4 0.0 0.32 11.4 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 RKO88606.1 - 0.18 12.2 0.0 0.32 11.4 0.0 1.4 1 0 0 1 1 1 0 RNA helicase Shisa PF13908.6 RKO88607.1 - 1.9 8.7 4.4 0.7 10.1 0.7 1.9 1 1 1 2 2 2 0 Wnt and FGF inhibitory regulator DUF4407 PF14362.6 RKO88608.1 - 5.3 6.3 19.8 0.67 9.3 10.1 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4407) DUF3552 PF12072.8 RKO88608.1 - 5.3 6.4 16.8 0.066 12.6 6.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) ABC_membrane PF00664.23 RKO88609.1 - 4.8e-19 69.1 9.9 6.6e-19 68.6 9.9 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 RKO88609.1 - 3.3e-18 66.5 0.5 1.5e-17 64.4 0.5 2.0 1 1 0 1 1 1 1 ABC transporter SMC_N PF02463.19 RKO88609.1 - 3.5e-05 23.4 0.7 0.15 11.5 0.0 2.5 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 RKO88609.1 - 0.00088 19.2 1.6 1 9.1 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 RKO88609.1 - 0.0013 18.6 0.2 0.0032 17.4 0.2 1.6 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 RKO88609.1 - 0.0035 17.4 0.0 0.0065 16.5 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_29 PF13555.6 RKO88609.1 - 0.0048 16.6 0.6 0.011 15.5 0.6 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 RKO88609.1 - 0.014 15.9 1.0 0.025 15.1 1.0 1.3 1 0 0 1 1 1 0 AAA domain Dynamin_N PF00350.23 RKO88609.1 - 0.14 12.2 0.2 0.22 11.5 0.2 1.3 1 0 0 1 1 1 0 Dynamin family ABC_ATPase PF09818.9 RKO88609.1 - 0.43 9.3 1.4 0.72 8.6 1.4 1.3 1 0 0 1 1 1 0 Predicted ATPase of the ABC class YesK PF14150.6 RKO88609.1 - 0.58 10.4 6.2 0.24 11.6 1.6 2.4 2 0 0 2 2 2 0 YesK-like protein FANCI_S4 PF14678.6 RKO88610.1 - 7.1e-37 126.9 1.0 7.1e-37 126.9 1.0 2.0 2 1 0 2 2 2 1 FANCI solenoid 4 Fanconi_A PF03511.14 RKO88610.1 - 0.15 12.0 0.4 3.8 7.5 0.1 2.4 2 0 0 2 2 2 0 Fanconi anaemia group A protein LRIF1 PF15741.5 RKO88610.1 - 0.56 8.7 6.5 0.83 8.1 6.5 1.3 1 0 0 1 1 1 0 Ligand-dependent nuclear receptor-interacting factor 1 Presenilin PF01080.17 RKO88610.1 - 3.3 6.4 7.9 4.4 6.0 7.9 1.2 1 0 0 1 1 1 0 Presenilin DUF4746 PF15928.5 RKO88610.1 - 5.3 6.4 13.6 11 5.3 13.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Nucleo_P87 PF07267.11 RKO88610.1 - 9.1 5.0 7.2 11 4.7 7.2 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 LEA_2 PF03168.13 RKO88611.1 - 6.3e-05 23.4 0.0 7.5e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Late embryogenesis abundant protein FAD_binding_6 PF00970.24 RKO88613.1 - 1.2e-06 28.8 0.0 2.5e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain SH3_9 PF14604.6 RKO88613.1 - 1.6e-06 27.9 0.0 4.8e-06 26.3 0.0 1.9 1 0 0 1 1 1 1 Variant SH3 domain Cyt-b5 PF00173.28 RKO88613.1 - 1.8e-05 24.8 0.0 3.8e-05 23.7 0.0 1.7 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain SH3_1 PF00018.28 RKO88613.1 - 0.00019 21.0 0.0 0.00042 19.9 0.0 1.6 1 0 0 1 1 1 1 SH3 domain DOMON PF03351.17 RKO88613.1 - 0.00071 19.8 0.0 0.0015 18.8 0.0 1.5 1 0 0 1 1 1 1 DOMON domain Cytochrom_B561 PF03188.16 RKO88613.1 - 0.0066 16.6 2.2 0.0066 16.6 2.2 2.4 2 1 1 3 3 3 2 Eukaryotic cytochrome b561 DUF2427 PF10348.9 RKO88613.1 - 1.6 8.6 8.4 3.5 7.5 3.2 3.7 2 1 0 2 2 2 0 Domain of unknown function (DUF2427) DUF4079 PF13301.6 RKO88613.1 - 1.7 8.8 6.9 2.7 8.1 0.5 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF4079) SdpI PF13630.6 RKO88613.1 - 9.7 6.4 9.4 0.6 10.3 2.5 2.3 2 0 0 2 2 2 0 SdpI/YhfL protein family F-box-like PF12937.7 RKO88614.1 - 0.009 15.9 7.7 0.019 14.8 1.0 3.8 4 0 0 4 4 4 1 F-box-like LRR_6 PF13516.6 RKO88614.1 - 0.099 12.7 0.1 0.81 9.9 0.0 2.6 2 0 0 2 2 2 0 Leucine Rich repeat Stress-antifung PF01657.17 RKO88614.1 - 0.16 12.6 0.4 1.5 9.5 0.1 2.2 2 0 0 2 2 2 0 Salt stress response/antifungal Chitin_synth_2 PF03142.15 RKO88615.1 - 0.0013 17.5 0.2 0.0019 16.9 0.2 1.2 1 0 0 1 1 1 1 Chitin synthase F-box-like PF12937.7 RKO88616.1 - 3.5e-07 30.0 2.6 3.8e-05 23.5 0.9 2.8 2 0 0 2 2 2 2 F-box-like F-box PF00646.33 RKO88616.1 - 0.063 13.2 2.2 5.6 7.0 0.3 3.0 2 0 0 2 2 2 0 F-box domain F-box_5 PF18511.1 RKO88616.1 - 0.61 9.7 3.5 0.24 11.0 0.5 1.8 2 0 0 2 2 2 0 F-box Acetyltransf_16 PF05301.11 RKO88617.1 - 2.6e-19 69.6 0.0 1.7e-17 63.7 0.0 2.1 2 0 0 2 2 2 2 GNAT acetyltransferase, Mec-17 YABBY PF04690.13 RKO88618.1 - 1e-12 49.0 0.8 5e-11 43.4 0.1 2.0 1 1 0 2 2 2 2 YABBY protein Ccdc124 PF06244.12 RKO88618.1 - 0.018 15.6 0.2 0.052 14.1 0.0 1.7 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 124 /Oxs1 Hat1_N PF10394.9 RKO88619.1 - 1.4e-19 70.9 0.0 2.2e-19 70.3 0.0 1.3 1 0 0 1 1 1 1 Histone acetyl transferase HAT1 N-terminus Hat1_N PF10394.9 RKO88620.1 - 8.1e-05 22.9 0.2 0.00025 21.3 0.1 1.9 2 0 0 2 2 2 1 Histone acetyl transferase HAT1 N-terminus Acetyltransf_1 PF00583.25 RKO88620.1 - 0.00034 20.8 0.0 0.00059 20.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family ORC3_N PF07034.11 RKO88621.1 - 2.1e-20 73.1 0.0 2.7e-20 72.8 0.0 1.1 1 0 0 1 1 1 1 Origin recognition complex (ORC) subunit 3 N-terminus FAD_binding_3 PF01494.19 RKO88622.1 - 1.9e-21 76.7 2.6 1.2e-08 34.6 0.1 3.1 3 0 0 3 3 3 3 FAD binding domain NAD_binding_8 PF13450.6 RKO88622.1 - 4.2e-05 23.7 0.0 9.5e-05 22.6 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 RKO88622.1 - 9.6e-05 21.7 0.0 0.00016 21.1 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 RKO88622.1 - 0.00022 20.9 1.7 0.0005 19.8 0.4 2.0 1 1 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 RKO88622.1 - 0.00064 19.0 0.0 0.0011 18.3 0.0 1.3 1 0 0 1 1 1 1 Thi4 family SE PF08491.10 RKO88622.1 - 0.00078 18.6 0.0 0.14 11.1 0.0 2.1 2 0 0 2 2 2 2 Squalene epoxidase Pyr_redox_3 PF13738.6 RKO88622.1 - 0.0017 17.7 0.0 0.0024 17.2 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 RKO88622.1 - 0.0034 16.5 0.1 0.037 13.1 0.0 2.4 3 0 0 3 3 3 1 Lycopene cyclase protein HI0933_like PF03486.14 RKO88622.1 - 0.016 14.0 0.0 0.021 13.6 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein NAD_Gly3P_dh_N PF01210.23 RKO88622.1 - 0.024 14.6 0.0 0.079 12.9 0.0 1.8 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.18 RKO88622.1 - 0.026 14.4 0.0 0.058 13.3 0.0 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 RKO88622.1 - 0.11 11.9 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 RKO88622.1 - 0.15 12.7 0.6 0.38 11.4 0.0 1.9 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent DUF4129 PF13559.6 RKO88622.1 - 0.23 11.8 3.4 0.12 12.7 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4129) ketoacyl-synt PF00109.26 RKO88625.1 - 4.6e-23 82.1 0.1 2.2e-22 79.9 0.1 2.0 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain ACPS PF01648.20 RKO88625.1 - 2.7e-14 53.3 0.0 5.4e-14 52.3 0.0 1.5 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily Ketoacyl-synt_C PF02801.22 RKO88625.1 - 2e-12 47.2 0.0 5.4e-12 45.8 0.0 1.8 1 0 0 1 1 1 1 Beta-ketoacyl synthase, C-terminal domain SAT PF16073.5 RKO88626.1 - 7.6e-11 42.2 0.0 1.1e-10 41.7 0.0 1.2 1 0 0 1 1 1 1 Starter unit:ACP transacylase in aflatoxin biosynthesis FAS_N PF17828.1 RKO88626.1 - 3e-10 40.2 0.0 5.4e-10 39.4 0.0 1.4 1 0 0 1 1 1 1 N-terminal domain in fatty acid synthase subunit beta MscL PF01741.18 RKO88628.1 - 1.2e-15 57.8 0.0 1.5e-15 57.6 0.0 1.1 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL FAT PF02259.23 RKO88629.1 - 1.8e-10 40.6 0.0 5.4e-10 39.0 0.0 1.7 2 0 0 2 2 2 1 FAT domain DUF5092 PF17010.5 RKO88629.1 - 0.0044 17.0 0.0 0.0094 15.9 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5092) Urb2 PF10441.9 RKO88629.1 - 0.036 14.0 0.0 0.15 12.0 0.0 2.0 1 1 0 1 1 1 0 Urb2/Npa2 family TPR_14 PF13428.6 RKO88630.1 - 1.9e-09 37.5 10.9 1.3 10.0 0.0 7.1 7 0 0 7 7 6 1 Tetratricopeptide repeat MIT PF04212.18 RKO88630.1 - 6.9e-06 26.0 23.4 0.1 12.7 0.7 6.5 6 1 1 7 7 7 3 MIT (microtubule interacting and transport) domain TPR_2 PF07719.17 RKO88630.1 - 2.4e-05 24.1 26.8 0.33 11.2 0.2 8.3 7 2 2 9 9 9 2 Tetratricopeptide repeat TPR_12 PF13424.6 RKO88630.1 - 3e-05 24.2 19.4 4.9 7.5 0.0 7.3 7 0 0 7 7 7 3 Tetratricopeptide repeat PPR PF01535.20 RKO88630.1 - 3e-05 23.9 2.0 0.049 13.9 0.1 5.6 7 1 1 8 8 7 1 PPR repeat TPR_7 PF13176.6 RKO88630.1 - 0.00039 20.2 15.9 0.47 10.6 0.1 7.4 7 1 0 7 7 7 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO88630.1 - 0.0012 19.4 10.4 7.2 7.3 0.1 6.3 6 1 0 6 6 5 1 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO88630.1 - 0.0016 18.7 15.1 0.073 13.3 0.1 5.7 4 2 0 4 4 4 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 RKO88630.1 - 0.004 17.6 15.2 2.2 8.8 0.3 6.8 5 2 1 6 6 6 1 Tetratricopeptide repeat PPR_2 PF13041.6 RKO88630.1 - 0.0055 16.9 4.2 0.058 13.6 0.2 4.1 5 0 0 5 5 4 1 PPR repeat family TPR_6 PF13174.6 RKO88630.1 - 0.006 17.2 18.8 1.4 9.7 0.2 7.4 7 1 0 7 7 7 1 Tetratricopeptide repeat SNAP PF14938.6 RKO88630.1 - 0.0064 15.9 27.3 2.3 7.6 4.3 6.3 2 2 2 5 5 5 3 Soluble NSF attachment protein, SNAP Clathrin PF00637.20 RKO88630.1 - 0.017 15.0 11.0 3.1 7.7 0.8 5.5 3 2 4 7 7 7 0 Region in Clathrin and VPS TPR_1 PF00515.28 RKO88630.1 - 0.077 12.9 28.0 0.25 11.3 1.3 6.8 7 1 0 7 7 6 0 Tetratricopeptide repeat Chalcone PF02431.15 RKO88630.1 - 0.11 11.9 0.0 0.18 11.2 0.0 1.4 1 0 0 1 1 1 0 Chalcone-flavanone isomerase Coatomer_WDAD PF04053.14 RKO88630.1 - 0.16 11.0 2.8 12 4.9 0.1 3.1 1 1 3 4 4 4 0 Coatomer WD associated region DUF3560 PF12083.8 RKO88630.1 - 0.71 10.0 3.3 24 5.1 0.1 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF3560) Exonuc_VII_S PF02609.16 RKO88630.1 - 3.4 7.8 8.4 80 3.4 0.0 5.4 7 0 0 7 7 7 0 Exonuclease VII small subunit zf-H2C2_2 PF13465.6 RKO88631.1 - 0.00082 19.7 0.7 0.00082 19.7 0.7 2.3 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 RKO88631.1 - 0.047 14.5 9.8 5.6 8.1 0.7 3.6 3 0 0 3 3 3 0 C2H2-type zinc finger zf-RING_7 PF02591.15 RKO88631.1 - 0.091 13.0 0.2 0.26 11.5 0.2 1.8 1 0 0 1 1 1 0 C4-type zinc ribbon domain DHHC PF01529.20 RKO88631.1 - 0.26 11.4 0.7 0.41 10.8 0.7 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase zf-C2H2 PF00096.26 RKO88631.1 - 0.94 10.1 13.1 0.93 10.1 1.0 3.5 3 0 0 3 3 3 0 Zinc finger, C2H2 type CaM_bdg_C0 PF10562.9 RKO88631.1 - 1 9.4 3.7 1.1 9.3 0.6 2.3 2 0 0 2 2 2 0 Calmodulin-binding domain C0 of NMDA receptor NR1 subunit Iso_dh PF00180.20 RKO88632.1 - 2.8e-73 247.0 0.0 6.3e-73 245.9 0.0 1.5 2 0 0 2 2 2 1 Isocitrate/isopropylmalate dehydrogenase Glyco_hydro_18 PF00704.28 RKO88635.1 - 3e-50 171.7 0.4 3.7e-50 171.4 0.4 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 Peptidase_C48 PF02902.19 RKO88637.1 - 2.7e-11 43.7 0.3 3.6e-11 43.3 0.3 1.2 1 0 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain DUF3218 PF11508.8 RKO88638.1 - 0.15 11.5 0.0 0.17 11.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3218) Phage_BR0599 PF09356.10 RKO88638.1 - 0.18 12.2 0.0 0.23 11.8 0.0 1.2 1 0 0 1 1 1 0 Phage conserved hypothetical protein BR0599 Trypan_PARP PF05887.11 RKO88640.1 - 0.0003 20.8 45.8 0.026 14.5 36.8 2.1 1 1 1 2 2 2 2 Procyclic acidic repetitive protein (PARP) PlyB_C PF18684.1 RKO88640.1 - 0.03 14.0 0.0 0.039 13.7 0.0 1.2 1 0 0 1 1 1 0 Pleurotolysin B C-terminal domain Neisseria_TspB PF05616.13 RKO88640.1 - 8.1 4.8 18.3 10 4.5 18.3 1.2 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein zf-RING_2 PF13639.6 RKO88642.1 - 1.7e-12 47.5 11.0 2.1e-12 47.1 11.0 1.1 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 RKO88642.1 - 1.5e-09 37.4 7.0 3.1e-09 36.4 7.0 1.5 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 RKO88642.1 - 2.4e-08 34.2 9.0 5.8e-08 32.9 9.0 1.6 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 RKO88642.1 - 7.3e-08 32.1 9.0 1e-07 31.7 9.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO88642.1 - 1.5e-07 31.2 7.0 2e-07 30.8 7.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 RKO88642.1 - 2.9e-07 30.3 6.6 3.8e-07 30.0 6.6 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 RKO88642.1 - 6.9e-06 26.0 3.1 8.9e-06 25.7 3.1 1.3 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 RKO88642.1 - 8.5e-06 25.7 3.1 8.5e-06 25.7 3.1 1.7 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 RKO88642.1 - 2.6e-05 24.0 8.2 3.9e-05 23.4 8.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 RKO88642.1 - 0.0005 19.9 9.2 0.0014 18.4 7.0 2.0 1 1 1 2 2 2 2 Prokaryotic RING finger family 4 RINGv PF12906.7 RKO88642.1 - 0.0045 17.1 8.3 0.0065 16.6 8.3 1.2 1 0 0 1 1 1 1 RING-variant domain Zn_ribbon_17 PF17120.5 RKO88642.1 - 0.016 14.8 7.7 0.048 13.3 7.7 1.8 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 RKO88642.1 - 0.05 13.8 7.6 0.48 10.6 8.2 2.0 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 RKO88642.1 - 0.15 11.9 7.8 0.52 10.2 7.8 1.8 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING-like PF08746.11 RKO88642.1 - 0.61 10.4 6.8 1.3 9.4 6.8 1.6 1 1 0 1 1 1 0 RING-like domain zf-RING_2 PF13639.6 RKO88643.1 - 9.6e-16 57.9 5.0 1.1e-15 57.6 5.0 1.1 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 RKO88643.1 - 1.8e-13 50.0 2.6 2.7e-13 49.4 2.6 1.3 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 RKO88643.1 - 1.6e-10 40.6 4.2 2.2e-10 40.2 4.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 RKO88643.1 - 2.8e-09 37.1 5.8 2e-08 34.4 1.9 2.0 1 1 1 2 2 2 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 RKO88643.1 - 7.3e-09 35.4 1.8 8.8e-09 35.2 1.8 1.1 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 RKO88643.1 - 1.1e-08 34.8 2.8 1.5e-08 34.3 2.8 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 RKO88643.1 - 5.5e-07 29.5 0.4 5.5e-07 29.5 0.4 1.6 1 1 0 1 1 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 RKO88643.1 - 2e-05 24.5 3.0 2.7e-05 24.1 3.0 1.3 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 RKO88643.1 - 8.4e-05 22.4 2.9 0.00012 21.9 2.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 RKO88643.1 - 0.00019 21.2 3.9 0.00038 20.3 3.8 1.6 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 RKO88643.1 - 0.00024 21.2 2.1 0.00051 20.1 2.1 1.5 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING RINGv PF12906.7 RKO88643.1 - 0.0013 18.8 2.1 0.0032 17.6 2.1 1.6 1 1 0 1 1 1 1 RING-variant domain Zn_ribbon_17 PF17120.5 RKO88643.1 - 0.0034 17.0 4.0 0.0055 16.3 4.0 1.4 1 1 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-RING_4 PF14570.6 RKO88643.1 - 0.017 14.9 4.6 0.023 14.5 4.6 1.2 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain FANCL_C PF11793.8 RKO88643.1 - 0.018 15.2 4.9 0.056 13.6 4.9 1.9 1 1 0 1 1 1 0 FANCL C-terminal domain Vps39_2 PF10367.9 RKO88643.1 - 0.036 14.5 0.8 0.036 14.5 0.8 1.7 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 2 zf-RING-like PF08746.11 RKO88643.1 - 0.038 14.3 2.1 0.067 13.5 2.1 1.4 1 1 0 1 1 1 0 RING-like domain PHD PF00628.29 RKO88643.1 - 0.14 12.1 3.2 0.24 11.3 3.2 1.5 1 0 0 1 1 1 0 PHD-finger zf-C3H2C3 PF17122.5 RKO88643.1 - 0.49 10.5 7.0 2 8.5 7.0 2.1 1 1 0 1 1 1 0 Zinc-finger zf-RING_2 PF13639.6 RKO88644.1 - 2.5e-11 43.7 8.4 3.1e-11 43.4 8.4 1.1 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 RKO88644.1 - 3.7e-09 36.7 5.5 4.6e-09 36.4 5.5 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 RKO88644.1 - 8.5e-08 31.8 4.5 8.5e-08 31.8 4.5 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_2 PF13923.6 RKO88644.1 - 3.4e-07 30.0 6.0 4.4e-07 29.6 6.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO88644.1 - 9.1e-07 28.7 4.1 1.1e-06 28.3 4.1 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 RKO88644.1 - 3.5e-06 27.0 2.1 3.7e-06 26.9 2.1 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 RKO88644.1 - 3.6e-06 26.8 4.4 4.6e-06 26.5 4.4 1.2 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 RKO88644.1 - 3e-05 23.8 5.7 4.1e-05 23.4 5.7 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 RKO88644.1 - 4.5e-05 23.2 6.3 0.00022 21.0 6.3 1.9 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 RKO88644.1 - 0.00068 19.6 3.6 0.00068 19.6 3.6 1.6 1 1 1 2 2 2 1 RING-type zinc-finger RINGv PF12906.7 RKO88644.1 - 0.0037 17.4 4.6 0.0056 16.8 4.6 1.3 1 0 0 1 1 1 1 RING-variant domain Zn_ribbon_17 PF17120.5 RKO88644.1 - 0.011 15.4 4.6 0.033 13.8 4.4 1.9 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING-like PF08746.11 RKO88644.1 - 0.064 13.6 3.5 0.11 12.8 3.5 1.5 1 1 0 1 1 1 0 RING-like domain zf-Nse PF11789.8 RKO88644.1 - 0.077 12.8 1.2 0.1 12.4 1.2 1.2 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-C3H2C3 PF17122.5 RKO88644.1 - 0.11 12.5 4.0 0.41 10.7 4.0 1.9 1 1 0 1 1 1 0 Zinc-finger zf-C3HC4_4 PF15227.6 RKO88644.1 - 0.12 12.5 5.9 0.41 10.9 5.9 1.8 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 RKO88644.1 - 0.17 11.7 6.5 0.88 9.4 6.5 1.9 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain ArgoN PF16486.5 RKO88645.1 - 5.4e-12 46.5 0.0 7.7e-12 46.0 0.0 1.2 1 0 0 1 1 1 1 N-terminal domain of argonaute DEAD PF00270.29 RKO88646.1 - 7.4e-40 136.6 0.0 1.2e-39 135.9 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO88646.1 - 6.8e-17 61.8 0.0 1.6e-15 57.4 0.0 2.7 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO88646.1 - 6.4e-07 29.5 0.0 1.1e-06 28.7 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 RKO88646.1 - 0.013 15.7 0.3 0.15 12.3 0.3 2.3 1 1 0 1 1 1 0 AAA domain BenE PF03594.13 RKO88646.1 - 0.076 11.8 0.0 0.13 11.1 0.0 1.3 1 0 0 1 1 1 0 Benzoate membrane transport protein D5_N PF08706.11 RKO88648.1 - 2.2e-10 41.0 0.0 2.7e-10 40.7 0.0 1.2 1 0 0 1 1 1 1 D5 N terminal like Homeodomain PF00046.29 RKO88649.1 - 8.7e-21 73.5 0.2 9.3e-21 73.4 0.2 1.0 1 0 0 1 1 1 1 Homeodomain Homeobox_KN PF05920.11 RKO88649.1 - 0.024 14.5 0.1 0.031 14.2 0.1 1.2 1 0 0 1 1 1 0 Homeobox KN domain MOSC PF03473.17 RKO88650.1 - 4e-27 94.8 0.0 7.2e-27 94.0 0.0 1.4 1 0 0 1 1 1 1 MOSC domain Aminotran_5 PF00266.19 RKO88650.1 - 3.2e-25 88.9 0.0 4e-24 85.2 0.0 2.0 2 0 0 2 2 2 1 Aminotransferase class-V MOSC_N PF03476.16 RKO88650.1 - 2.1e-17 63.1 0.0 3.9e-17 62.2 0.0 1.5 1 0 0 1 1 1 1 MOSC N-terminal beta barrel domain AMP-binding PF00501.28 RKO88651.1 - 2.7e-67 227.2 0.1 4e-67 226.7 0.1 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 RKO88651.1 - 0.0047 17.9 1.1 0.0092 16.9 0.5 1.9 1 1 0 1 1 1 1 AMP-binding enzyme C-terminal domain Hydrolase PF00702.26 RKO88651.1 - 0.15 12.3 0.0 0.37 11.0 0.0 1.7 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase Cyclin_N PF00134.23 RKO88652.1 - 6.7e-15 55.0 0.1 1.1e-14 54.3 0.1 1.3 1 0 0 1 1 1 1 Cyclin, N-terminal domain Cyclin_C PF02984.19 RKO88652.1 - 1.6e-05 24.9 0.5 5.6e-05 23.2 0.2 2.1 2 0 0 2 2 2 1 Cyclin, C-terminal domain tRNA_anti-codon PF01336.25 RKO88654.1 - 2.9e-07 30.4 0.0 3.6e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DUF223 PF02721.14 RKO88654.1 - 0.0011 19.2 0.0 0.0017 18.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF223 VWA PF00092.28 RKO88654.1 - 0.014 15.6 0.0 0.018 15.3 0.0 1.1 1 0 0 1 1 1 0 von Willebrand factor type A domain Gloverin PF10793.9 RKO88654.1 - 0.1 12.5 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 Gloverin-like protein DUF1752 PF08550.10 RKO88655.1 - 1.3e-13 50.5 3.9 2.5e-13 49.6 3.9 1.5 1 0 0 1 1 1 1 Fungal protein of unknown function (DUF1752) PBP1_TM PF14812.6 RKO88655.1 - 0.14 12.5 0.3 0.39 11.1 0.3 1.7 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal YL1 PF05764.13 RKO88655.1 - 0.15 12.2 4.2 0.28 11.3 4.2 1.4 1 0 0 1 1 1 0 YL1 nuclear protein PAXIP1_C PF15364.6 RKO88655.1 - 1.2 9.5 5.6 0.66 10.3 2.6 2.0 2 0 0 2 2 2 0 PAXIP1-associated-protein-1 C term PTIP binding protein Lipase_GDSL_2 PF13472.6 RKO88656.1 - 4.4e-07 30.5 2.5 6.8e-07 29.9 2.5 1.3 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 RKO88656.1 - 7e-05 22.9 0.0 0.00012 22.1 0.0 1.4 1 1 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase GON PF08685.11 RKO88657.1 - 1.5e-09 38.0 1.2 9.4e-07 28.9 0.0 2.8 2 1 1 3 3 3 2 GON domain GON PF08685.11 RKO88658.1 - 0.00056 19.8 0.1 0.0027 17.6 0.0 2.1 2 1 0 2 2 2 1 GON domain Fungal_trans PF04082.18 RKO88659.1 - 1.1e-06 27.9 0.4 1.9e-06 27.1 0.4 1.3 1 0 0 1 1 1 1 Fungal specific transcription factor domain CFEM PF05730.11 RKO88661.1 - 8.8e-08 32.1 38.1 0.00028 20.9 7.4 3.4 3 0 0 3 3 3 3 CFEM domain Runt PF00853.19 RKO88661.1 - 0.024 14.2 0.1 3.1 7.4 0.0 2.5 2 0 0 2 2 2 0 Runt domain SBP PF03110.14 RKO88661.1 - 0.043 14.1 0.1 34 4.9 0.0 3.2 3 0 0 3 3 3 0 SBP domain TOBE_2 PF08402.10 RKO88661.1 - 0.12 12.6 0.0 11 6.3 0.0 2.6 2 0 0 2 2 2 0 TOBE domain WI12 PF07107.11 RKO88661.1 - 0.12 12.5 0.4 14 5.9 0.1 2.5 2 0 0 2 2 2 0 Wound-induced protein WI12 GNAT_C PF18164.1 RKO88661.1 - 0.14 11.8 0.0 11 5.7 0.0 2.9 3 0 0 3 3 3 0 GNAT-like C-terminal domain DUF3019 PF11456.8 RKO88661.1 - 0.26 11.8 4.0 7.3 7.2 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3019) Alk_phosphatase PF00245.20 RKO88662.1 - 3e-37 128.6 0.4 3.8e-37 128.2 0.4 1.1 1 0 0 1 1 1 1 Alkaline phosphatase TBP PF00352.21 RKO88663.1 - 1.3e-33 114.7 0.1 1.5e-33 114.6 0.1 1.0 1 0 0 1 1 1 1 Transcription factor TFIID (or TATA-binding protein, TBP) DUF4295 PF14128.6 RKO88663.1 - 0.0039 17.0 0.1 0.032 14.1 0.0 2.1 1 1 1 2 2 2 1 Domain of unknown function (DUF4295) DUF3378 PF11858.8 RKO88663.1 - 0.013 15.6 0.0 0.013 15.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3378) DUF410 PF04190.13 RKO88664.1 - 0.11 12.3 1.3 0.22 11.3 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF410) Cbl_N2 PF02761.14 RKO88665.1 - 4.6e-05 24.0 0.0 2.3 9.0 0.0 3.8 4 0 0 4 4 4 3 CBL proto-oncogene N-terminus, EF hand-like domain Peptidase_A21 PF03566.13 RKO88666.1 - 0.092 11.0 8.3 0.12 10.7 8.3 1.2 1 0 0 1 1 1 0 Peptidase family A21 eIF-1a PF01176.19 RKO88667.1 - 4.8e-20 71.1 0.0 6.8e-20 70.6 0.0 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Iso_dh PF00180.20 RKO88668.1 - 8.2e-100 334.3 0.0 9.4e-100 334.1 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase HHH_2 PF12826.7 RKO88668.1 - 0.097 12.8 0.0 0.38 10.9 0.0 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix motif bZIP_1 PF00170.21 RKO88671.1 - 1.8e-09 37.6 8.7 4.4e-08 33.1 3.8 2.5 2 0 0 2 2 2 2 bZIP transcription factor bZIP_2 PF07716.15 RKO88671.1 - 0.00052 20.0 5.3 0.00052 20.0 5.3 3.0 3 0 0 3 3 3 1 Basic region leucine zipper DREPP PF05558.12 RKO88671.1 - 0.004 17.1 0.3 0.16 11.9 0.0 2.3 2 0 0 2 2 2 1 DREPP plasma membrane polypeptide DUF1682 PF07946.14 RKO88671.1 - 0.017 14.3 0.4 0.017 14.3 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1682) Radical_SAM_N PF08497.10 RKO88671.1 - 0.018 14.3 1.3 0.027 13.7 1.3 1.4 1 0 0 1 1 1 0 Radical SAM N-terminal Exonuc_VII_L PF02601.15 RKO88671.1 - 0.32 10.5 23.4 1.3 8.5 1.1 2.1 2 0 0 2 2 2 0 Exonuclease VII, large subunit JIP_LZII PF16471.5 RKO88671.1 - 1.7 8.8 5.1 2.2 8.5 0.7 2.5 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II Sun2_CC2 PF18580.1 RKO88672.1 - 0.17 12.2 0.1 0.31 11.3 0.1 1.4 1 0 0 1 1 1 0 SUN2 coiled coil domain 2 Peptidase_C2 PF00648.21 RKO88674.1 - 9.4e-40 136.5 0.2 1.1e-38 133.0 0.2 2.0 1 1 0 1 1 1 1 Calpain family cysteine protease GDP_Man_Dehyd PF16363.5 RKO88675.1 - 2.8e-64 217.6 0.0 7.5e-64 216.2 0.0 1.6 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 RKO88675.1 - 9.3e-57 192.2 0.0 1.2e-56 191.9 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 RKO88675.1 - 6.3e-17 61.5 0.0 8.9e-17 61.0 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 RKO88675.1 - 8.6e-17 61.1 0.0 1.9e-16 60.0 0.0 1.5 1 1 1 2 2 2 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 RKO88675.1 - 8.9e-16 57.9 0.0 6.6e-15 55.0 0.0 1.9 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 RKO88675.1 - 3.1e-13 49.5 0.0 4.5e-13 48.9 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein KR PF08659.10 RKO88675.1 - 6.9e-08 32.6 0.2 5.4e-07 29.7 0.2 2.1 1 1 0 1 1 1 1 KR domain adh_short PF00106.25 RKO88675.1 - 1.8e-06 27.5 1.8 1.7e-05 24.4 1.9 2.4 1 1 0 1 1 1 1 short chain dehydrogenase NAD_binding_10 PF13460.6 RKO88675.1 - 0.0019 18.1 0.3 0.02 14.8 0.1 2.4 2 1 0 2 2 2 1 NAD(P)H-binding DAO PF01266.24 RKO88675.1 - 0.0052 16.4 0.0 0.86 9.1 0.1 2.3 1 1 1 2 2 2 1 FAD dependent oxidoreductase Sacchrp_dh_NADP PF03435.18 RKO88675.1 - 0.0079 16.5 0.0 0.023 15.0 0.0 1.8 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain Glyco_transf_4 PF13439.6 RKO88675.1 - 0.013 15.5 0.0 0.026 14.5 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 adh_short_C2 PF13561.6 RKO88675.1 - 0.041 13.4 0.0 0.073 12.6 0.0 1.4 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Myelin_PLP PF01275.19 RKO88675.1 - 0.1 12.4 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Myelin proteolipid protein (PLP or lipophilin) 3HCDH_N PF02737.18 RKO88675.1 - 0.11 12.4 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 RKO88675.1 - 0.11 13.1 0.1 0.24 12.0 0.1 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 RKO88675.1 - 0.17 12.1 0.0 0.39 11.0 0.0 1.6 1 1 0 1 1 1 0 TrkA-N domain F-box-like PF12937.7 RKO88676.1 - 5.4e-08 32.6 2.4 1.1e-07 31.6 2.4 1.6 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO88676.1 - 4.1e-05 23.3 1.3 7e-05 22.6 1.3 1.4 1 0 0 1 1 1 1 F-box domain DUF599 PF04654.12 RKO88677.1 - 1.2e-42 145.7 9.5 1.7e-42 145.3 9.5 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF599 CRCB PF02537.15 RKO88677.1 - 0.069 13.5 2.6 0.14 12.5 2.6 1.6 1 0 0 1 1 1 0 CrcB-like protein, Camphor Resistance (CrcB) FMN_red PF03358.15 RKO88678.1 - 3.1e-08 33.5 0.0 8.7e-08 32.0 0.0 1.7 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 RKO88678.1 - 0.047 13.4 0.1 0.09 12.5 0.1 1.4 1 0 0 1 1 1 0 Flavodoxin-like fold FMN_red PF03358.15 RKO88679.1 - 1.9e-10 40.7 0.0 2.8e-10 40.2 0.0 1.3 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 RKO88679.1 - 3e-05 23.8 0.0 4.2e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_1 PF00258.25 RKO88679.1 - 0.0032 17.7 0.1 0.022 14.9 0.1 2.3 2 1 0 2 2 2 1 Flavodoxin Flavodoxin_1 PF00258.25 RKO88680.1 - 0.11 12.7 0.0 0.14 12.4 0.0 1.1 1 0 0 1 1 1 0 Flavodoxin FERM_M PF00373.18 RKO88682.1 - 0.0038 17.6 0.0 0.0074 16.7 0.0 1.5 1 0 0 1 1 1 1 FERM central domain Pro_isomerase PF00160.21 RKO88684.1 - 7.9e-46 156.2 0.7 8.7e-46 156.1 0.7 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LRR_6 PF13516.6 RKO88685.1 - 0.021 14.9 0.1 1.3 9.3 0.0 3.4 4 0 0 4 4 4 0 Leucine Rich repeat LRR_4 PF12799.7 RKO88685.1 - 0.025 15.0 0.3 0.27 11.7 0.0 2.7 3 0 0 3 3 3 0 Leucine Rich repeats (2 copies) adh_short PF00106.25 RKO88686.1 - 1.3e-43 148.8 0.3 1.7e-43 148.4 0.3 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO88686.1 - 2.1e-29 102.7 4.9 2.9e-29 102.3 4.9 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 RKO88686.1 - 8.2e-11 42.1 0.6 1.3e-10 41.5 0.3 1.4 1 1 0 1 1 1 1 KR domain Pyr_redox_2 PF07992.14 RKO88686.1 - 0.028 13.6 0.8 0.047 12.9 0.8 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Adeno_PV PF03910.13 RKO88686.1 - 0.43 9.2 2.2 0.69 8.6 2.2 1.3 1 0 0 1 1 1 0 Adenovirus minor core protein PV EF-hand_7 PF13499.6 RKO88687.1 - 2.2e-06 28.0 0.9 3.2e-06 27.5 0.9 1.3 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 RKO88687.1 - 3e-06 26.4 0.2 1.5e-05 24.2 0.1 2.1 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 RKO88687.1 - 3.1e-06 26.7 0.3 6.7e-05 22.5 0.1 2.5 2 0 0 2 2 2 1 EF-hand domain EF_assoc_2 PF08356.12 RKO88687.1 - 5.3e-06 26.3 0.1 8.8e-06 25.6 0.1 1.4 1 0 0 1 1 1 1 EF hand associated EF-hand_5 PF13202.6 RKO88687.1 - 0.0019 17.6 0.4 0.024 14.1 0.2 2.3 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 RKO88687.1 - 0.062 13.2 0.6 0.54 10.2 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain pair PriCT_2 PF08707.11 RKO88687.1 - 0.095 13.1 0.2 0.15 12.4 0.0 1.5 2 0 0 2 2 2 0 Primase C terminal 2 (PriCT-2) MAPKK1_Int PF08923.10 RKO88688.1 - 9.7e-18 64.1 0.1 1.3e-17 63.7 0.1 1.1 1 0 0 1 1 1 1 Mitogen-activated protein kinase kinase 1 interacting TPR_15 PF13429.6 RKO88688.1 - 0.021 14.0 0.2 0.037 13.2 0.2 1.3 1 1 0 1 1 1 0 Tetratricopeptide repeat Kelch_6 PF13964.6 RKO88689.1 - 1.4e-07 31.5 10.1 1.7 9.0 0.0 6.3 5 1 1 6 6 6 3 Kelch motif Kelch_3 PF13415.6 RKO88689.1 - 4e-06 27.0 24.4 0.047 14.0 0.1 7.2 7 1 1 8 8 8 4 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO88689.1 - 1.3e-05 25.0 1.4 0.031 14.3 0.0 3.3 3 0 0 3 3 3 2 Kelch motif Kelch_4 PF13418.6 RKO88689.1 - 0.0012 18.8 21.0 0.24 11.4 0.0 6.8 7 1 0 7 7 7 2 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO88689.1 - 0.0024 17.4 7.9 12 5.5 0.1 5.4 5 1 0 5 5 5 2 Kelch motif Cys_rich_CPCC PF14206.6 RKO88689.1 - 0.2 11.5 0.4 0.38 10.6 0.4 1.4 1 0 0 1 1 1 0 Cysteine-rich CPCC DUF2039 PF10217.9 RKO88693.1 - 1.5 9.2 8.7 5.1 7.5 1.7 2.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2039) E7 PF00527.18 RKO88693.1 - 3 8.1 4.0 3.8 7.8 0.1 2.3 2 0 0 2 2 2 0 E7 protein, Early protein EzrA PF06160.12 RKO88694.1 - 0.00091 17.5 1.5 0.049 11.8 0.1 2.0 1 1 0 2 2 2 2 Septation ring formation regulator, EzrA DUF641 PF04859.12 RKO88694.1 - 0.002 18.5 2.5 0.099 13.0 0.2 2.2 2 0 0 2 2 2 1 Plant protein of unknown function (DUF641) Jnk-SapK_ap_N PF09744.9 RKO88694.1 - 0.0061 16.8 4.1 0.019 15.2 4.1 1.8 1 1 0 1 1 1 1 JNK_SAPK-associated protein-1 CENP-F_N PF10481.9 RKO88694.1 - 0.012 15.3 0.4 0.018 14.7 0.3 1.3 1 1 0 1 1 1 0 Cenp-F N-terminal domain HMMR_N PF15905.5 RKO88694.1 - 0.015 14.8 3.0 1.8 8.0 0.5 2.1 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal Trimer_CC PF08954.11 RKO88694.1 - 0.025 14.1 0.7 0.079 12.5 0.7 1.9 1 0 0 1 1 1 0 Trimerisation motif Cut12 PF11500.8 RKO88694.1 - 0.025 14.5 2.1 3.3 7.6 0.1 2.2 1 1 1 2 2 2 0 Spindle pole body formation-associated protein POTRA_2 PF08479.11 RKO88694.1 - 0.062 13.1 0.0 1.9 8.4 0.0 2.5 2 0 0 2 2 2 0 POTRA domain, ShlB-type Tail_P2_I PF09684.10 RKO88694.1 - 0.082 12.8 0.5 0.2 11.6 0.5 1.6 1 0 0 1 1 1 0 Phage tail protein (Tail_P2_I) DUF3450 PF11932.8 RKO88694.1 - 0.085 12.1 3.2 2.9 7.1 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Sigma70_ner PF04546.13 RKO88694.1 - 0.089 12.7 1.6 0.15 11.9 1.6 1.3 1 0 0 1 1 1 0 Sigma-70, non-essential region SKA2 PF16740.5 RKO88694.1 - 0.091 12.5 2.0 0.19 11.5 0.4 2.0 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 DUF4201 PF13870.6 RKO88694.1 - 0.1 12.3 1.7 2.8 7.6 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4201) Fib_alpha PF08702.10 RKO88694.1 - 0.18 12.0 0.2 2.7 8.2 0.0 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 RKO88694.1 - 0.19 12.1 2.4 5.3 7.4 0.3 2.9 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4164 PF13747.6 RKO88694.1 - 0.24 11.7 12.5 0.095 13.0 2.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) Atg14 PF10186.9 RKO88694.1 - 0.53 9.3 2.4 0.58 9.2 1.5 1.4 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 GAS PF13851.6 RKO88694.1 - 1 8.7 3.6 3.7 6.8 0.3 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding CENP-F_leu_zip PF10473.9 RKO88694.1 - 1.2 9.2 6.7 4.4 7.3 0.2 2.2 1 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spc7 PF08317.11 RKO88694.1 - 1.7 7.4 7.2 1 8.2 0.5 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein RVT_2 PF07727.14 RKO88695.1 - 0.018 14.7 0.1 0.29 10.7 0.1 2.0 1 1 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) QRPTase_C PF01729.19 RKO88696.1 - 1.1e-56 191.3 0.1 1.3e-56 191.0 0.1 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 RKO88696.1 - 8.4e-18 64.2 0.0 3.9e-17 62.1 0.0 2.1 2 1 1 3 3 3 1 Quinolinate phosphoribosyl transferase, N-terminal domain Peptidase_M36 PF02128.15 RKO88697.1 - 2.6e-89 300.0 0.0 2.9e-89 299.8 0.0 1.0 1 0 0 1 1 1 1 Fungalysin metallopeptidase (M36) Peptidase_M50B PF13398.6 RKO88697.1 - 0.11 12.1 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 Peptidase M50B-like RNA_pol_Rpb2_3 PF04565.16 RKO88698.1 - 0.45 10.7 4.2 3 8.1 0.2 2.9 1 1 2 3 3 3 0 RNA polymerase Rpb2, domain 3 Sad1_UNC PF07738.13 RKO88699.1 - 5.7e-15 55.5 0.0 5.7e-15 55.5 0.0 1.0 1 0 0 1 1 1 1 Sad1 / UNC-like C-terminal Asp PF00026.23 RKO88700.1 - 5.3e-45 154.2 0.1 7e-45 153.8 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO88700.1 - 3.9e-10 40.3 0.2 0.00019 21.7 0.1 2.4 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 RKO88700.1 - 0.11 13.2 2.8 1.4 9.6 0.6 2.8 2 1 0 2 2 2 0 Aspartyl protease Pyridoxal_deC PF00282.19 RKO88702.1 - 0.0014 17.5 0.1 0.0016 17.2 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain ATG16 PF08614.11 RKO88703.1 - 0.00076 19.8 14.3 0.00076 19.8 14.3 1.6 1 1 0 1 1 1 1 Autophagy protein 16 (ATG16) Macoilin PF09726.9 RKO88703.1 - 0.0012 17.5 11.9 0.0013 17.4 11.9 1.2 1 0 0 1 1 1 1 Macoilin family NPV_P10 PF05531.12 RKO88703.1 - 0.0031 17.9 6.1 0.11 13.0 2.7 3.0 1 1 1 2 2 2 1 Nucleopolyhedrovirus P10 protein Uso1_p115_C PF04871.13 RKO88703.1 - 0.0099 16.3 7.7 0.0099 16.3 7.7 2.3 1 1 2 3 3 3 1 Uso1 / p115 like vesicle tethering protein, C terminal region T3SS_basalb_I PF17001.5 RKO88703.1 - 0.16 12.6 4.4 0.22 12.1 0.2 2.6 1 1 1 2 2 2 0 Type III secretion basal body protein I, YscI, HrpB, PscI DASH_Hsk3 PF08227.11 RKO88703.1 - 0.24 11.8 3.5 0.87 10.0 0.1 3.0 3 0 0 3 3 3 0 DASH complex subunit Hsk3 like CENP-K PF11802.8 RKO88703.1 - 0.29 10.7 11.9 1 8.9 8.8 2.4 1 1 1 2 2 2 0 Centromere-associated protein K DUF724 PF05266.14 RKO88703.1 - 0.72 9.7 13.5 0.42 10.4 0.1 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Allexi_40kDa PF05549.11 RKO88703.1 - 0.82 9.1 5.9 0.58 9.6 3.3 1.8 1 1 1 2 2 2 0 Allexivirus 40kDa protein eIF3_N PF09440.10 RKO88703.1 - 0.98 9.9 5.5 2.3 8.6 5.5 1.8 1 1 0 1 1 1 0 eIF3 subunit 6 N terminal domain SATase_N PF06426.14 RKO88703.1 - 1.6 9.1 6.2 2.1 8.8 1.7 2.7 2 1 1 3 3 3 0 Serine acetyltransferase, N-terminal DUF4200 PF13863.6 RKO88703.1 - 5 7.5 19.4 16 5.9 0.0 3.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4200) COG2 PF06148.11 RKO88703.1 - 8.8 6.4 11.5 1.1e+02 2.9 8.3 2.9 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 BAF1_ABF1 PF04684.13 RKO88706.1 - 0.0084 15.2 7.2 0.22 10.5 0.6 2.1 2 0 0 2 2 2 2 BAF1 / ABF1 chromatin reorganising factor Eryth_link_C PF16915.5 RKO88706.1 - 0.012 15.6 0.1 7.3 6.6 0.0 2.4 2 0 0 2 2 2 0 Annelid erythrocruorin linker subunit C-terminus HrpF PF06266.12 RKO88706.1 - 0.025 14.9 2.3 6.5 7.1 0.2 2.4 2 0 0 2 2 2 0 HrpF protein Gly-zipper_Omp PF13488.6 RKO88706.1 - 0.03 14.3 0.3 13 5.9 0.0 2.4 2 0 0 2 2 2 0 Glycine zipper NDUFB10 PF10249.9 RKO88706.1 - 0.045 14.2 2.0 7.4 7.1 0.1 2.3 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase subunit 10 DUF4235 PF14019.6 RKO88706.1 - 0.046 13.8 4.7 3 8.0 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4235) CHMI PF02962.15 RKO88706.1 - 0.054 13.8 2.9 6.3 7.1 0.2 2.2 2 0 0 2 2 2 0 5-carboxymethyl-2-hydroxymuconate isomerase DUF4636 PF15468.6 RKO88706.1 - 0.063 13.0 0.0 12 5.6 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4636) DUF3870 PF12986.7 RKO88706.1 - 0.089 13.0 1.5 12 6.2 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3870) GIT1_C PF12205.8 RKO88706.1 - 0.097 12.8 4.1 4.6 7.4 0.3 2.5 2 0 0 2 2 2 0 G protein-coupled receptor kinase-interacting protein 1 C term TetR_C_24 PF17932.1 RKO88706.1 - 0.11 12.8 3.6 6.1 7.1 0.2 2.3 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain cwf21 PF08312.12 RKO88706.1 - 0.15 12.3 4.5 4.3 7.6 0.0 3.1 3 1 0 3 3 3 0 cwf21 domain ARGLU PF15346.6 RKO88706.1 - 0.19 11.6 13.6 1.6 8.6 3.0 2.4 2 0 0 2 2 2 0 Arginine and glutamate-rich 1 zf-HC2 PF13490.6 RKO88706.1 - 0.25 11.6 3.9 11 6.3 0.3 2.4 2 0 0 2 2 2 0 Putative zinc-finger PreAtp-grasp PF18604.1 RKO88706.1 - 0.98 9.1 4.9 1.9 8.1 0.3 2.1 2 0 0 2 2 2 0 Pre ATP-grasp domain TetR_C_16 PF17920.1 RKO88706.1 - 1.5 9.1 10.2 8.2 6.7 1.7 2.3 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain BMC PF00936.19 RKO88706.1 - 1.9 8.5 9.6 9.8 6.2 1.5 2.6 2 0 0 2 2 2 0 BMC domain WSD PF15613.6 RKO88707.1 - 1.1e-11 45.1 0.1 1.1e-11 45.1 0.1 3.3 3 1 0 3 3 3 1 Williams-Beuren syndrome DDT (WSD), D-TOX E motif DDT PF02791.17 RKO88707.1 - 5.2e-08 33.1 0.0 9.6e-08 32.2 0.0 1.4 1 0 0 1 1 1 1 DDT domain XRN1_D2_D3 PF18334.1 RKO88707.1 - 0.51 10.6 1.8 16 5.8 0.0 3.0 3 0 0 3 3 3 0 Exoribonuclease Xrn1 D2/D3 domain ABC2_membrane PF01061.24 RKO88708.1 - 1.5e-06 27.8 6.6 0.00023 20.7 4.7 2.2 2 0 0 2 2 2 2 ABC-2 type transporter LRR_6 PF13516.6 RKO88711.1 - 0.0023 17.8 14.4 4.5 7.6 0.1 7.8 10 0 0 10 10 10 2 Leucine Rich repeat F-box-like PF12937.7 RKO88711.1 - 0.27 11.2 6.1 0.053 13.4 1.7 2.3 2 0 0 2 2 2 0 F-box-like Cyclin PF08613.11 RKO88712.1 - 3.6e-08 33.9 0.0 5.2e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 RKO88712.1 - 0.00021 21.0 0.0 0.00046 19.9 0.0 1.5 1 1 0 1 1 1 1 Cyclin, N-terminal domain TIG PF01833.24 RKO88713.1 - 1.5e-10 41.0 0.4 1.5e-10 41.0 0.4 2.5 2 1 1 3 3 3 1 IPT/TIG domain TIG_plexin PF17960.1 RKO88713.1 - 0.081 12.9 0.0 0.4 10.7 0.0 2.1 2 0 0 2 2 2 0 TIG domain Helicase_C PF00271.31 RKO88715.1 - 1.3e-10 41.6 0.0 3e-10 40.4 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 RKO88715.1 - 5.8e-05 22.9 0.0 9.6e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase HA2 PF04408.23 RKO88715.1 - 0.00058 20.1 0.0 0.0048 17.2 0.0 2.2 2 0 0 2 2 2 1 Helicase associated domain (HA2) Pkinase PF00069.25 RKO88716.1 - 1.7e-24 86.6 0.0 1.9e-24 86.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO88716.1 - 2.6e-05 23.6 0.0 3.5e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Glyco_hydro_28 PF00295.17 RKO88720.1 - 3.9e-42 144.5 10.4 5.4e-42 144.0 10.4 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 Beta_helix PF13229.6 RKO88720.1 - 1.7e-05 24.7 7.7 1.7e-05 24.7 7.7 2.2 2 0 0 2 2 2 2 Right handed beta helix region zf-primase PF09329.11 RKO88721.1 - 0.047 13.5 0.2 0.086 12.7 0.2 1.4 1 0 0 1 1 1 0 Primase zinc finger Bacillus_PapR PF05968.11 RKO88721.1 - 0.16 11.9 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Bacillus PapR protein PHY PF00360.20 RKO88723.1 - 0.11 11.8 0.1 0.21 10.9 0.1 1.4 1 1 0 1 1 1 0 Phytochrome region LEA_2 PF03168.13 RKO88724.1 - 0.00052 20.5 0.7 0.069 13.7 0.1 2.7 2 0 0 2 2 2 2 Late embryogenesis abundant protein DUF3712 PF12505.8 RKO88724.1 - 0.0016 18.7 0.2 0.011 16.0 0.1 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF3712) Glyco_hydro_35 PF01301.19 RKO88726.1 - 1e-50 173.2 0.1 1.1e-50 173.1 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 35 Glyco_hydro_42 PF02449.15 RKO88726.1 - 1e-09 38.2 0.0 1.2e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 Beta-galactosidase Cellulase PF00150.18 RKO88726.1 - 2.7e-06 27.0 0.0 3.1e-06 26.8 0.0 1.0 1 0 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) PRIMA1 PF16101.5 RKO88727.1 - 0.14 12.2 1.0 0.25 11.4 1.0 1.5 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Lustrin_cystein PF14625.6 RKO88729.1 - 0.068 13.6 3.1 2.7 8.4 0.2 2.2 2 0 0 2 2 2 0 Lustrin, cysteine-rich repeated domain AAA_16 PF13191.6 RKO88734.1 - 0.14 12.5 0.0 0.17 12.3 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_19 PF13245.6 RKO88734.1 - 0.19 12.1 0.1 0.29 11.5 0.1 1.2 1 0 0 1 1 1 0 AAA domain WD40 PF00400.32 RKO88738.1 - 1.3e-05 25.9 0.0 2.4e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 WD domain, G-beta repeat bZIP_1 PF00170.21 RKO88738.1 - 0.0007 19.6 2.2 0.0016 18.5 2.2 1.5 1 0 0 1 1 1 1 bZIP transcription factor DUF5320 PF17253.2 RKO88738.1 - 0.1 13.7 0.2 0.22 12.6 0.2 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5320) MULE PF10551.9 RKO88739.1 - 0.00014 22.2 0.0 0.0011 19.4 0.0 2.1 1 1 0 1 1 1 1 MULE transposase domain MRP-L47 PF06984.13 RKO88740.1 - 4.1e-18 65.3 0.8 5.2e-18 65.0 0.8 1.1 1 0 0 1 1 1 1 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) BAG PF02179.16 RKO88741.1 - 3.8e-13 49.7 4.6 7.4e-13 48.7 0.5 2.4 2 0 0 2 2 2 1 BAG domain eIF3_subunit PF08597.10 RKO88741.1 - 0.83 9.5 11.3 0.05 13.5 2.5 2.1 2 0 0 2 2 2 0 Translation initiation factor eIF3 subunit FRG1 PF06229.12 RKO88742.1 - 1.3e-33 116.3 0.3 1.6e-33 116.1 0.3 1.1 1 0 0 1 1 1 1 FRG1-like domain Fascin PF06268.13 RKO88742.1 - 2e-07 31.2 0.0 9.5e-06 25.8 0.0 2.1 2 1 1 3 3 3 2 Fascin domain DUF1674 PF07896.12 RKO88743.1 - 7e-22 77.6 6.5 7.9e-22 77.5 5.8 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1674) Glyco_hydro_18 PF00704.28 RKO88744.1 - 9.8e-13 48.5 0.0 1.1e-12 48.4 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 CCCAP PF15964.5 RKO88745.1 - 4.9e-10 38.4 19.1 4.9e-10 38.4 19.1 4.6 2 2 2 4 4 4 2 Centrosomal colon cancer autoantigen protein family bZIP_1 PF00170.21 RKO88745.1 - 0.0097 16.0 4.8 0.0097 16.0 4.8 9.2 4 2 4 9 9 9 2 bZIP transcription factor Filament PF00038.21 RKO88745.1 - 0.065 12.8 87.0 0.071 12.7 33.9 5.4 1 1 3 4 4 4 0 Intermediate filament protein DASH_Dam1 PF08653.10 RKO88745.1 - 0.093 12.5 0.2 0.093 12.5 0.2 4.5 5 1 0 5 5 5 0 DASH complex subunit Dam1 HsbA PF12296.8 RKO88745.1 - 1.7 9.1 6.6 1.1 9.7 0.2 3.7 3 2 0 4 4 4 0 Hydrophobic surface binding protein A RPA_interact_C PF14768.6 RKO88745.1 - 6.6 7.4 6.4 8 7.1 0.4 3.7 2 1 1 3 3 3 0 Replication protein A interacting C-terminal SH3_9 PF14604.6 RKO88748.1 - 9.2e-11 41.4 0.5 2.8e-10 39.9 0.1 1.9 2 0 0 2 2 2 1 Variant SH3 domain SH3_1 PF00018.28 RKO88748.1 - 3.7e-10 39.3 1.4 3.9e-10 39.2 0.2 1.7 2 0 0 2 2 2 1 SH3 domain WW PF00397.26 RKO88748.1 - 1.5e-08 34.6 4.8 3.2e-08 33.5 4.8 1.5 1 0 0 1 1 1 1 WW domain SH3_2 PF07653.17 RKO88748.1 - 2.2e-05 24.1 0.0 3.9e-05 23.2 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain Pex14_N PF04695.13 RKO88748.1 - 0.033 14.8 1.8 0.071 13.8 1.8 1.5 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region EGF_2 PF07974.13 RKO88749.1 - 0.0004 20.7 15.0 0.00078 19.8 15.0 1.5 1 0 0 1 1 1 1 EGF-like domain XK-related PF09815.9 RKO88749.1 - 0.0045 16.1 2.3 0.0079 15.3 2.3 1.3 1 0 0 1 1 1 1 XK-related protein EGF PF00008.27 RKO88749.1 - 0.022 15.1 11.3 0.046 14.0 11.3 1.6 1 0 0 1 1 1 0 EGF-like domain CYYR1 PF10873.8 RKO88749.1 - 0.039 14.4 0.5 0.093 13.2 0.5 1.6 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 DUF2254 PF10011.9 RKO88749.1 - 0.08 11.7 0.6 0.13 11.0 0.6 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) EGF_Tenascin PF18720.1 RKO88749.1 - 0.086 12.9 1.6 0.17 12.0 1.6 1.5 1 0 0 1 1 1 0 Tenascin EGF domain Sel1 PF08238.12 RKO88751.1 - 3.7e-13 49.7 7.5 0.0012 19.5 0.3 4.1 4 0 0 4 4 4 3 Sel1 repeat DIOX_N PF14226.6 RKO88752.1 - 1.5e-05 25.7 0.0 3e-05 24.8 0.0 1.6 1 1 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal Abhydrolase_1 PF00561.20 RKO88753.1 - 3.9e-14 52.9 0.2 5.4e-14 52.5 0.2 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydro_lipase PF04083.16 RKO88753.1 - 1.8e-12 46.6 0.0 3.1e-12 45.9 0.0 1.4 1 0 0 1 1 1 1 Partial alpha/beta-hydrolase lipase region Hydrolase_4 PF12146.8 RKO88753.1 - 4.2e-08 32.8 0.1 1.1e-07 31.4 0.0 1.7 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Herpes_U34 PF04541.13 RKO88753.1 - 0.039 13.2 0.0 0.064 12.5 0.0 1.3 1 0 0 1 1 1 0 Herpesvirus virion protein U34 VirJ PF06057.11 RKO88753.1 - 0.13 12.1 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial virulence protein (VirJ) DUF4372 PF14294.6 RKO88753.1 - 0.2 11.9 0.0 0.36 11.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4372) Polyketide_cyc PF03364.20 RKO88755.1 - 0.0098 16.1 1.2 0.018 15.3 1.2 1.5 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Myb_DNA-binding PF00249.31 RKO88756.1 - 5.6e-10 39.3 1.4 0.0015 18.7 0.0 3.0 3 0 0 3 3 3 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO88756.1 - 0.0039 17.4 2.8 5.1 7.4 0.1 3.7 3 1 0 3 3 3 2 Myb-like DNA-binding domain SURF2 PF05477.11 RKO88756.1 - 0.43 10.2 8.0 0.91 9.2 8.0 1.5 1 0 0 1 1 1 0 Surfeit locus protein 2 (SURF2) NS3_envE PF02723.14 RKO88758.1 - 0.027 14.5 0.5 0.04 14.0 0.5 1.3 1 0 0 1 1 1 0 Non-structural protein NS3/Small envelope protein E Ras PF00071.22 RKO88759.1 - 1.7e-65 219.6 0.1 2e-65 219.3 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO88759.1 - 3.7e-35 120.7 0.0 5.8e-35 120.1 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO88759.1 - 5.9e-14 51.9 0.1 7.2e-14 51.6 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 RKO88759.1 - 1.9e-06 27.6 0.1 5.3e-06 26.1 0.0 1.7 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 RKO88759.1 - 2.1e-05 24.0 0.0 2.6e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 RKO88759.1 - 6.2e-05 23.0 0.1 0.27 11.1 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase MMR_HSR1 PF01926.23 RKO88759.1 - 0.00014 21.9 0.1 0.00046 20.2 0.0 1.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase G-alpha PF00503.20 RKO88759.1 - 0.0043 16.3 1.3 0.27 10.4 0.2 3.0 1 1 1 2 2 2 1 G-protein alpha subunit FeoB_N PF02421.18 RKO88759.1 - 0.017 14.6 0.0 0.19 11.3 0.0 2.1 1 1 0 1 1 1 0 Ferrous iron transport protein B AAA_29 PF13555.6 RKO88759.1 - 0.051 13.3 0.1 0.14 12.0 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain SRPRB PF09439.10 RKO88759.1 - 0.052 13.0 0.0 0.061 12.8 0.0 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit DUF3963 PF13124.6 RKO88759.1 - 0.077 13.0 0.2 0.17 11.9 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3963) AAA_16 PF13191.6 RKO88759.1 - 0.085 13.2 0.0 0.11 12.9 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain ING PF12998.7 RKO88760.1 - 3.7e-12 46.7 0.6 3.7e-12 46.7 0.6 1.8 2 1 0 2 2 2 1 Inhibitor of growth proteins N-terminal histone-binding RhlB PF12300.8 RKO88760.1 - 0.019 15.1 3.8 0.029 14.5 3.8 1.3 1 0 0 1 1 1 0 ATP-dependent RNA helicase RhlB SlyX PF04102.12 RKO88760.1 - 0.48 11.1 1.8 0.71 10.5 0.0 2.0 2 0 0 2 2 2 0 SlyX DUF3302 PF11742.8 RKO88763.1 - 0.052 13.7 0.3 0.052 13.7 0.3 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3302) DUF2839 PF10999.8 RKO88763.1 - 0.38 11.1 0.1 0.38 11.1 0.1 2.7 2 1 2 4 4 4 0 Protein of unknown function (DUF2839) IFRD_C PF04836.12 RKO88764.1 - 0.61 10.7 5.0 0.98 10.1 0.9 2.5 2 1 0 2 2 2 0 Interferon-related protein conserved region BAH PF01426.18 RKO88766.1 - 5.4e-07 29.5 0.0 1e-06 28.6 0.0 1.4 1 0 0 1 1 1 1 BAH domain DNMT1-RFD PF12047.8 RKO88766.1 - 0.0025 17.9 0.0 0.0048 17.0 0.0 1.4 1 0 0 1 1 1 1 Cytosine specific DNA methyltransferase replication foci domain DNA_methylase PF00145.17 RKO88766.1 - 0.0033 16.8 0.0 0.0053 16.1 0.0 1.3 1 0 0 1 1 1 1 C-5 cytosine-specific DNA methylase TIR_2 PF13676.6 RKO88767.1 - 1.6e-10 41.6 0.0 3.5e-10 40.5 0.0 1.6 1 0 0 1 1 1 1 TIR domain RhoGEF PF00621.20 RKO88768.1 - 2e-39 135.7 0.1 2.8e-39 135.2 0.1 1.2 1 0 0 1 1 1 1 RhoGEF domain PH PF00169.29 RKO88768.1 - 0.00073 20.0 0.0 0.0016 19.0 0.0 1.5 1 0 0 1 1 1 1 PH domain OPT PF03169.15 RKO88769.1 - 4.7e-33 114.7 7.8 5.3e-33 114.5 7.8 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein PMSR PF01625.21 RKO88773.1 - 1.7e-55 187.4 0.3 2.1e-55 187.1 0.3 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase RINGv PF12906.7 RKO88774.1 - 0.052 13.7 0.1 0.098 12.8 0.1 1.4 1 0 0 1 1 1 0 RING-variant domain TFIIA PF03153.13 RKO88775.1 - 0.0088 16.1 22.7 0.012 15.6 22.7 1.3 1 0 0 1 1 1 1 Transcription factor IIA, alpha/beta subunit SKA1 PF07160.12 RKO88775.1 - 2 8.2 8.8 3.4 7.5 8.8 1.3 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 1 PEHE PF15275.6 RKO88775.1 - 8.6 7.0 11.9 18 5.9 11.9 1.4 1 0 0 1 1 1 0 PEHE domain peroxidase PF00141.23 RKO88776.1 - 3.9e-29 102.0 0.1 8.4e-29 100.9 0.1 1.5 1 0 0 1 1 1 1 Peroxidase Mucin PF01456.17 RKO88776.1 - 0.014 15.4 35.1 0.032 14.2 35.1 1.6 1 0 0 1 1 1 0 Mucin-like glycoprotein BCDHK_Adom3 PF10436.9 RKO88781.1 - 5.2e-44 149.9 0.0 2.3e-43 147.9 0.0 1.9 2 0 0 2 2 2 1 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase HATPase_c PF02518.26 RKO88781.1 - 4e-07 30.5 0.0 1.3e-06 28.9 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 RKO88781.1 - 0.14 12.0 0.0 0.24 11.2 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CAP_N PF01213.19 RKO88781.1 - 0.48 9.9 1.2 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Adenylate cyclase associated (CAP) N terminal Cbl_N2 PF02761.14 RKO88782.1 - 0.0026 18.4 0.5 7.2 7.4 0.0 3.8 3 1 0 3 3 3 2 CBL proto-oncogene N-terminus, EF hand-like domain Mg_trans_NIPA PF05653.14 RKO88784.1 - 4e-16 59.0 10.4 6.3e-16 58.3 10.4 1.3 1 1 0 1 1 1 1 Magnesium transporter NIPA EamA PF00892.20 RKO88784.1 - 1.8e-05 24.9 6.2 1.8e-05 24.9 6.2 3.2 2 1 1 3 3 3 2 EamA-like transporter family Nab2p_Zf1 PF18260.1 RKO88785.1 - 0.35 10.8 0.3 0.35 10.8 0.3 6.1 6 1 0 5 5 5 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 zf-CCCH_6 PF18585.1 RKO88785.1 - 0.78 9.7 7.7 1.1 9.2 0.2 3.5 3 2 0 3 3 3 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 zf-CCCH PF00642.24 RKO88785.1 - 1.3 9.0 10.1 0.83 9.6 0.3 4.1 4 0 0 4 4 4 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Preseq_ALAS PF09029.10 RKO88785.1 - 1.6 9.2 8.4 3.5 8.1 5.4 2.9 1 1 1 2 2 2 0 5-aminolevulinate synthase presequence MFS_1 PF07690.16 RKO88786.1 - 0.00042 19.4 5.2 0.00053 19.0 5.2 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily Glyco_trans_2_3 PF13632.6 RKO88787.1 - 4.6e-25 88.7 3.6 4.6e-25 88.7 3.6 1.9 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 RKO88787.1 - 5e-17 62.6 0.1 9.2e-17 61.7 0.1 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 RKO88787.1 - 0.041 13.4 0.1 0.38 10.2 0.1 2.1 1 1 0 1 1 1 0 Glycosyl transferase family 21 ADH_zinc_N_2 PF13602.6 RKO88790.1 - 7.6e-08 33.5 0.0 1.1e-07 33.0 0.0 1.3 1 1 0 1 1 1 1 Zinc-binding dehydrogenase Cadherin-like PF12733.7 RKO88795.1 - 4.7e-06 27.1 0.8 0.056 14.0 0.1 2.4 2 0 0 2 2 2 2 Cadherin-like beta sandwich domain CBM_6 PF03422.15 RKO88795.1 - 0.00058 20.2 6.5 0.23 11.8 2.2 2.5 2 0 0 2 2 2 2 Carbohydrate binding module (family 6) BPL_LplA_LipB_2 PF16917.5 RKO88795.1 - 0.0056 16.2 0.9 13 5.3 0.0 3.1 2 1 1 3 3 3 2 Biotin/lipoate A/B protein ligase family CBM60 PF16841.5 RKO88795.1 - 0.02 15.3 0.4 14 6.2 0.0 3.2 3 0 0 3 3 3 0 Ca-dependent carbohydrate-binding module xylan-binding Adhesin_P1 PF03257.13 RKO88795.1 - 0.028 15.0 7.8 1.7 9.3 0.3 3.2 2 1 1 3 3 3 0 Mycoplasma adhesin P1 BetaGal_dom4_5 PF13364.6 RKO88795.1 - 1.2 9.7 5.0 4 8.0 0.1 2.9 2 1 1 3 3 3 0 Beta-galactosidase jelly roll domain Fib_alpha PF08702.10 RKO88796.1 - 0.0011 19.1 7.0 0.03 14.5 1.1 2.1 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family Baculo_PEP_C PF04513.12 RKO88796.1 - 0.0013 18.8 8.5 0.015 15.4 0.9 2.2 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus Clusterin PF01093.17 RKO88796.1 - 0.0014 17.8 2.3 0.002 17.2 2.2 1.4 1 1 0 1 1 1 1 Clusterin DUF4407 PF14362.6 RKO88796.1 - 0.022 14.1 0.3 0.028 13.8 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) COG2 PF06148.11 RKO88796.1 - 0.047 13.8 1.0 0.14 12.2 0.9 1.8 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Apolipoprotein PF01442.18 RKO88796.1 - 0.074 12.9 0.0 0.58 10.0 0.0 1.9 2 0 0 2 2 2 0 Apolipoprotein A1/A4/E domain WXG100 PF06013.12 RKO88796.1 - 0.075 13.3 1.2 13 6.1 0.0 2.6 2 1 0 2 2 2 0 Proteins of 100 residues with WXG DUF3086 PF11285.8 RKO88796.1 - 0.089 11.9 0.9 0.18 10.9 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3086) DUF948 PF06103.11 RKO88796.1 - 0.094 13.0 4.7 3.5 8.0 0.5 2.7 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) Nup54 PF13874.6 RKO88796.1 - 0.11 12.6 3.5 0.72 10.0 1.4 2.1 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 Prominin PF05478.11 RKO88796.1 - 0.12 10.3 10.6 0.32 8.9 7.9 1.9 1 1 1 2 2 2 0 Prominin DUF1664 PF07889.12 RKO88796.1 - 0.19 11.8 5.8 4.9 7.2 0.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Snf7 PF03357.21 RKO88796.1 - 0.26 10.9 3.4 1.2 8.7 3.3 1.9 1 1 0 1 1 1 0 Snf7 DUF148 PF02520.17 RKO88796.1 - 0.6 10.2 9.1 0.16 12.0 1.9 2.4 1 1 1 2 2 2 0 Domain of unknown function DUF148 MbeB_N PF04837.12 RKO88796.1 - 1 9.7 6.3 0.4 11.0 0.3 2.8 2 2 1 3 3 3 0 MbeB-like, N-term conserved region XhlA PF10779.9 RKO88796.1 - 4.9 7.4 6.3 28 5.0 1.0 2.6 2 0 0 2 2 2 0 Haemolysin XhlA peroxidase PF00141.23 RKO88797.1 - 0.0015 18.2 0.0 0.0022 17.7 0.0 1.2 1 0 0 1 1 1 1 Peroxidase eIF-5_eIF-2B PF01873.17 RKO88798.1 - 1.7e-40 137.6 1.3 2.2e-40 137.2 1.3 1.1 1 0 0 1 1 1 1 Domain found in IF2B/IF5 TF_Zn_Ribbon PF08271.12 RKO88798.1 - 0.0067 15.9 0.1 0.012 15.1 0.1 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding IF2_N PF04760.15 RKO88798.1 - 0.13 12.1 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region TSP9 PF11493.8 RKO88799.1 - 0.19 12.4 0.2 0.19 12.4 0.2 1.7 2 0 0 2 2 2 0 Thylakoid soluble phosphoprotein TSP9 RIX1 PF08167.12 RKO88800.1 - 0.016 14.9 2.9 0.16 11.7 0.4 2.7 2 1 0 2 2 2 0 rRNA processing/ribosome biogenesis JAB PF01398.21 RKO88801.1 - 7.7e-13 48.5 0.1 1.5e-12 47.6 0.1 1.5 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease DUF4510 PF14971.6 RKO88801.1 - 0.023 15.0 2.0 0.049 14.0 2.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4510) CHASE3 PF05227.13 RKO88801.1 - 0.041 13.8 2.7 0.098 12.6 2.7 1.5 1 0 0 1 1 1 0 CHASE3 domain DUF5082 PF16888.5 RKO88802.1 - 0.0048 17.2 0.7 0.0048 17.2 0.7 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF5082) US22 PF02393.16 RKO88802.1 - 0.014 15.7 0.0 0.023 15.0 0.0 1.3 1 0 0 1 1 1 0 US22 like SpoOE-like PF09388.10 RKO88802.1 - 0.048 13.6 2.1 5.3 7.0 0.2 2.7 3 0 0 3 3 3 0 Spo0E like sporulation regulatory protein Syntaxin-6_N PF09177.11 RKO88802.1 - 0.095 13.3 1.7 0.41 11.2 0.2 2.2 2 0 0 2 2 2 0 Syntaxin 6, N-terminal DUF1664 PF07889.12 RKO88802.1 - 0.11 12.5 2.7 0.22 11.6 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) CSN5_C PF18323.1 RKO88802.1 - 0.18 12.8 1.7 4.2 8.4 0.0 2.9 2 1 1 3 3 3 0 Cop9 signalosome subunit 5 C-terminal domain Baculo_PEP_C PF04513.12 RKO88802.1 - 0.29 11.2 2.1 1 9.4 0.4 2.0 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus FlxA PF14282.6 RKO88802.1 - 1.2 9.2 7.2 0.51 10.3 1.5 2.2 2 0 0 2 2 2 0 FlxA-like protein Fib_alpha PF08702.10 RKO88802.1 - 2 8.6 4.3 0.77 9.9 1.4 1.8 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Phasin PF05597.11 RKO88802.1 - 3.5 7.6 9.0 7.2 6.6 1.1 2.3 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) BST2 PF16716.5 RKO88802.1 - 3.8 8.2 12.3 5.3 7.7 1.0 3.2 2 1 1 3 3 3 0 Bone marrow stromal antigen 2 Lipoprotein_20 PF13942.6 RKO88802.1 - 4.9 7.1 9.9 21 5.0 10.0 2.1 1 1 0 1 1 1 0 YfhG lipoprotein CCDC-167 PF15188.6 RKO88802.1 - 5.9 7.3 9.9 0.15 12.4 1.9 2.2 2 1 0 2 2 2 0 Coiled-coil domain-containing protein 167 DUF883 PF05957.13 RKO88802.1 - 6.6 7.4 13.3 0.3 11.7 3.0 2.8 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) DUF4407 PF14362.6 RKO88802.1 - 6.7 6.0 8.9 13 5.1 8.9 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4140 PF13600.6 RKO88802.1 - 9.6 6.7 12.4 20 5.7 7.3 3.0 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Kelch_5 PF13854.6 RKO88804.1 - 0.00038 20.4 0.1 0.46 10.5 0.0 2.7 2 0 0 2 2 2 2 Kelch motif stn_TNFRSF12A PF12191.8 RKO88804.1 - 0.15 12.3 0.0 0.69 10.1 0.0 2.1 2 0 0 2 2 2 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain Kelch_6 PF13964.6 RKO88804.1 - 0.23 11.8 1.5 0.95 9.9 0.1 2.6 3 0 0 3 3 3 0 Kelch motif Kelch_4 PF13418.6 RKO88804.1 - 1.4 9.0 4.6 3.3 7.8 0.1 3.2 3 0 0 3 3 3 0 Galactose oxidase, central domain Ribonuc_red_sm PF00268.21 RKO88805.1 - 9.3e-97 323.8 1.8 1.1e-96 323.6 1.8 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain KaiA PF07688.12 RKO88805.1 - 0.19 11.9 0.9 1.3 9.2 0.1 2.2 2 0 0 2 2 2 0 KaiA C-terminal domain SDA1 PF05285.12 RKO88806.1 - 0.21 11.0 8.0 0.29 10.5 8.0 1.2 1 0 0 1 1 1 0 SDA1 PCM1_C PF15717.5 RKO88806.1 - 0.44 9.2 7.2 0.62 8.7 7.2 1.1 1 0 0 1 1 1 0 Pericentriolar material 1 C terminus Metallophos PF00149.28 RKO88807.1 - 4.4e-36 125.3 0.3 6.7e-36 124.7 0.3 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PPP5 PF08321.12 RKO88807.1 - 7.6e-26 90.2 0.0 1.3e-25 89.5 0.0 1.4 1 0 0 1 1 1 1 PPP5 TPR repeat region TPR_1 PF00515.28 RKO88807.1 - 5.7e-06 25.9 0.1 9.7e-05 22.0 0.0 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 RKO88807.1 - 3.9e-05 23.4 0.0 0.00081 19.3 0.0 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_9 PF13371.6 RKO88807.1 - 0.0024 18.0 0.0 0.0052 16.9 0.0 1.6 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO88807.1 - 0.0025 18.5 0.2 0.014 16.2 0.0 2.3 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_11 PF13414.6 RKO88807.1 - 0.0026 17.4 0.1 0.65 9.7 0.0 3.0 2 1 1 3 3 3 2 TPR repeat TPR_16 PF13432.6 RKO88807.1 - 0.018 15.7 0.4 0.38 11.4 0.0 1.7 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_19 PF14559.6 RKO88807.1 - 0.046 14.2 0.3 0.11 13.0 0.3 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_8 PF13181.6 RKO88807.1 - 0.052 13.8 0.0 0.33 11.3 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Asp PF00026.23 RKO88808.1 - 3.9e-31 108.6 0.0 4.5e-31 108.4 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease zf-HYPF PF07503.12 RKO88809.1 - 0.25 11.2 0.1 0.25 11.2 0.1 2.0 2 0 0 2 2 2 0 HypF finger Whib PF02467.16 RKO88811.1 - 1.3 9.7 9.6 4.5 7.9 0.2 3.9 2 1 1 3 3 3 0 Transcription factor WhiB zf-CCCH_6 PF18585.1 RKO88811.1 - 1.3 8.9 8.9 3.1 7.7 0.4 4.2 4 1 0 4 4 4 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 HHH_8 PF14716.6 RKO88812.1 - 4.9e-15 55.7 0.2 1.1e-14 54.5 0.0 1.7 2 0 0 2 2 2 1 Helix-hairpin-helix domain DNA_pol_B_palm PF14792.6 RKO88812.1 - 4.5e-13 49.4 0.0 7.7e-13 48.6 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase beta palm DNA_pol_B_thumb PF14791.6 RKO88812.1 - 3.6e-06 27.0 0.0 7.9e-06 26.0 0.0 1.6 1 0 0 1 1 1 1 DNA polymerase beta thumb Bombolitin PF08096.11 RKO88812.1 - 0.0067 16.6 0.3 0.022 15.0 0.3 1.9 1 0 0 1 1 1 1 Bombolitin family Potassium_chann PF11404.8 RKO88813.1 - 0.69 9.8 2.2 2.3 8.1 2.2 1.9 1 0 0 1 1 1 0 Potassium voltage-gated channel G-patch PF01585.23 RKO88815.1 - 3.9e-15 55.5 2.3 3.9e-15 55.5 2.3 1.7 2 0 0 2 2 2 1 G-patch domain zf-C2H2_jaz PF12171.8 RKO88815.1 - 4.8e-05 23.5 4.7 7.9e-05 22.8 4.7 1.4 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding G-patch_2 PF12656.7 RKO88815.1 - 9.6e-05 22.4 0.5 0.00025 21.1 0.5 1.7 1 0 0 1 1 1 1 G-patch domain zf-met PF12874.7 RKO88815.1 - 0.00092 19.5 1.0 0.0016 18.7 1.0 1.4 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 RKO88815.1 - 0.0054 17.1 1.6 0.0094 16.3 1.6 1.3 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) TMEM144 PF07857.12 RKO88819.1 - 0.13 11.1 0.1 0.17 10.8 0.1 1.0 1 0 0 1 1 1 0 Transmembrane family, TMEM144 of transporters PALP PF00291.25 RKO88821.1 - 2.8e-20 72.9 0.1 3.3e-20 72.7 0.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DEAD PF00270.29 RKO88822.1 - 3.3e-09 36.7 0.4 2.2e-07 30.8 0.0 2.6 2 1 1 3 3 3 2 DEAD/DEAH box helicase ResIII PF04851.15 RKO88822.1 - 6.8e-05 22.9 0.0 0.00043 20.3 0.0 2.0 1 1 0 2 2 2 1 Type III restriction enzyme, res subunit DUF2732 PF10809.8 RKO88822.1 - 0.036 13.9 2.4 8.3 6.4 1.6 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF2732) T2SSE PF00437.20 RKO88822.1 - 0.074 12.1 0.0 0.16 11.0 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein LRR_4 PF12799.7 RKO88824.1 - 0.0005 20.4 0.0 0.22 12.0 0.0 2.6 2 0 0 2 2 2 2 Leucine Rich repeats (2 copies) PDH PF02153.17 RKO88827.1 - 5.2e-17 61.7 0.1 7e-17 61.3 0.1 1.1 1 0 0 1 1 1 1 Prephenate dehydrogenase WLM PF08325.10 RKO88827.1 - 0.023 14.7 0.0 0.045 13.8 0.0 1.4 1 0 0 1 1 1 0 WLM domain Phi_1 PF04674.12 RKO88828.1 - 1.2e-12 47.8 0.1 1.7e-06 27.6 0.0 3.3 2 1 1 3 3 3 3 Phosphate-induced protein 1 conserved region WSC PF01822.19 RKO88828.1 - 4e-06 26.9 1.0 4.3e-05 23.6 0.2 2.5 2 0 0 2 2 2 1 WSC domain 3HCDH_N PF02737.18 RKO88829.1 - 3.7e-21 75.8 0.1 9.7e-18 64.7 0.0 2.2 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Glycogen_syn PF05693.13 RKO88832.1 - 0 1045.3 0.0 0 1044.5 0.0 1.3 1 1 0 1 1 1 1 Glycogen synthase Glycos_transf_1 PF00534.20 RKO88832.1 - 3.1e-08 33.3 0.0 0.00033 20.2 0.0 2.3 2 0 0 2 2 2 2 Glycosyl transferases group 1 Glyco_transf_5 PF08323.11 RKO88832.1 - 1.1e-06 28.5 0.0 2.6e-06 27.3 0.0 1.6 2 0 0 2 2 2 1 Starch synthase catalytic domain Glyco_trans_1_4 PF13692.6 RKO88832.1 - 1.1e-06 29.1 0.0 0.003 18.0 0.0 2.4 2 0 0 2 2 2 2 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 RKO88832.1 - 1.7e-06 28.2 0.1 5.4e-06 26.5 0.1 1.8 2 0 0 2 2 2 1 Glycosyltransferase Family 4 DUF1978 PF09321.10 RKO88832.1 - 0.056 12.7 0.1 0.098 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1978) GNAT_C PF18164.1 RKO88832.1 - 0.09 12.5 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 GNAT-like C-terminal domain LIM PF00412.22 RKO88833.1 - 5.4e-10 39.3 1.4 5.9e-10 39.2 1.4 1.0 1 0 0 1 1 1 1 LIM domain zf_UBZ PF18439.1 RKO88833.1 - 0.0027 17.2 2.9 0.24 11.0 0.8 2.2 2 0 0 2 2 2 2 Ubiquitin-Binding Zinc Finger TBCC PF07986.12 RKO88834.1 - 2.5e-10 40.1 0.0 3.8e-06 26.6 0.4 2.6 3 0 0 3 3 3 2 Tubulin binding cofactor C Acetyltransf_13 PF13880.6 RKO88835.1 - 0.11 12.5 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase DUF1115 PF06544.12 RKO88836.1 - 0.12 12.4 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1115) PIN_6 PF17146.4 RKO88837.1 - 6.7e-30 103.4 0.3 1.1e-29 102.7 0.3 1.4 1 0 0 1 1 1 1 PIN domain of ribonuclease NOB1_Zn_bind PF08772.11 RKO88837.1 - 2.3e-19 69.3 0.5 4e-19 68.5 0.5 1.4 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like DZR PF12773.7 RKO88837.1 - 0.0057 16.7 0.1 0.0096 15.9 0.1 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 RKO88837.1 - 0.067 14.0 0.2 0.11 13.3 0.2 1.3 1 0 0 1 1 1 0 zinc-ribbon family E6 PF00518.17 RKO88837.1 - 0.072 13.5 0.4 0.13 12.7 0.4 1.3 1 0 0 1 1 1 0 Early Protein (E6) zf-ribbon_3 PF13248.6 RKO88837.1 - 0.15 11.5 0.1 0.31 10.5 0.1 1.4 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 RKO88837.1 - 0.55 10.0 3.4 0.99 9.2 3.4 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Pro_isomerase PF00160.21 RKO88838.1 - 4.8e-47 160.1 0.6 8.3e-47 159.4 0.6 1.4 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RRM_1 PF00076.22 RKO88838.1 - 4.5e-19 68.0 0.0 8e-19 67.2 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 RKO88838.1 - 0.0014 18.7 0.0 0.0025 17.9 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif SLD3 PF08639.10 RKO88839.1 - 5.7e-13 48.5 0.0 4.1e-12 45.7 0.0 2.1 2 0 0 2 2 2 1 DNA replication regulator SLD3 MFS_1 PF07690.16 RKO88840.1 - 3e-12 46.2 26.7 3.5e-11 42.6 26.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO88840.1 - 3.3 6.5 10.7 0.16 10.8 0.4 2.5 3 0 0 3 3 3 0 Sugar (and other) transporter MFS_1 PF07690.16 RKO88841.1 - 1.1e-08 34.4 8.9 2.3e-08 33.4 9.0 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily Phage_holin_3_6 PF07332.11 RKO88841.1 - 0.0057 16.7 0.1 0.0057 16.7 0.1 2.2 2 0 0 2 2 2 1 Putative Actinobacterial Holin-X, holin superfamily III MFS_4 PF06779.14 RKO88841.1 - 0.011 15.1 5.6 0.014 14.7 5.6 1.1 1 0 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB Ammonium_transp PF00909.21 RKO88842.1 - 9.5e-79 264.9 19.2 1.2e-78 264.6 19.2 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Retrotran_gag_2 PF14223.6 RKO88848.1 - 2e-10 40.5 0.0 5e-08 32.7 0.0 2.2 1 1 0 1 1 1 1 gag-polypeptide of LTR copia-type Retrotran_gag_3 PF14244.6 RKO88848.1 - 0.003 17.3 0.1 0.0058 16.4 0.1 1.5 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type zf-CW PF07496.15 RKO88848.1 - 2.6 8.1 5.6 17 5.5 0.7 2.5 2 0 0 2 2 2 0 CW-type Zinc Finger Phage_r1t_holin PF16945.5 RKO88850.1 - 0.29 11.3 4.2 2.4 8.4 1.8 2.3 2 0 0 2 2 2 0 Putative lactococcus lactis phage r1t holin Mito_carr PF00153.27 RKO88852.1 - 6.7e-35 118.9 7.1 1.3e-14 53.9 0.4 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein A_deamin PF02137.18 RKO88853.1 - 7.5e-31 107.8 0.0 5.6e-29 101.6 0.0 2.2 2 0 0 2 2 2 2 Adenosine-deaminase (editase) domain VPS13 PF16908.5 RKO88856.1 - 4.3e-41 141.3 0.0 5.5e-41 140.9 0.0 1.1 1 0 0 1 1 1 1 Vacuolar sorting-associated protein 13, N-terminal Chorein_N PF12624.7 RKO88856.1 - 3.5e-35 120.6 0.1 7.3e-35 119.6 0.1 1.5 1 0 0 1 1 1 1 N-terminal region of Chorein or VPS13 IQ PF00612.27 RKO88857.1 - 1.7e-05 24.2 10.3 4.1e-05 23.0 1.7 3.6 3 0 0 3 3 3 2 IQ calmodulin-binding motif Cnn_1N PF07989.11 RKO88858.1 - 7.5e-08 32.4 9.3 7.5e-08 32.4 9.3 3.7 3 1 0 3 3 3 1 Centrosomin N-terminal motif 1 p450 PF00067.22 RKO88858.1 - 9.5e-08 31.2 0.0 1.8e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Cytochrome P450 Fez1 PF06818.15 RKO88858.1 - 0.078 13.4 24.2 0.025 15.1 20.0 2.2 1 1 1 2 2 2 0 Fez1 DUF3584 PF12128.8 RKO88858.1 - 4.6 4.6 25.3 7.4 3.9 25.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Kelch_4 PF13418.6 RKO88859.1 - 4.9e-18 64.9 19.6 7.5e-09 35.5 0.3 5.7 5 1 0 5 5 5 3 Galactose oxidase, central domain Kelch_3 PF13415.6 RKO88859.1 - 1.2e-16 60.5 23.3 3.2e-06 27.3 0.0 6.0 5 1 0 5 5 5 4 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO88859.1 - 4.1e-13 49.1 13.6 8.5e-07 29.0 0.1 5.4 6 0 0 6 6 6 3 Kelch motif Kelch_5 PF13854.6 RKO88859.1 - 1.2e-10 41.2 10.3 0.0012 18.8 0.1 4.1 4 0 0 4 4 4 3 Kelch motif Kelch_1 PF01344.25 RKO88859.1 - 4.9e-10 38.8 8.4 0.00055 19.5 0.3 5.1 5 0 0 5 5 5 4 Kelch motif Kelch_2 PF07646.15 RKO88859.1 - 0.00023 21.0 4.3 1.1 9.3 0.1 4.6 5 0 0 5 5 5 2 Kelch motif DUF2625 PF10946.8 RKO88859.1 - 0.13 11.3 0.5 0.55 9.3 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function DUF2625 zf-met PF12874.7 RKO88860.1 - 0.053 13.9 0.0 0.1 13.0 0.0 1.5 1 0 0 1 1 1 0 Zinc-finger of C2H2 type zf-Sec23_Sec24 PF04810.15 RKO88860.1 - 0.78 9.8 6.0 0.18 11.9 2.4 1.8 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger ATG16 PF08614.11 RKO88862.1 - 0.011 16.0 11.9 0.011 16.0 11.9 5.0 3 1 1 4 4 4 0 Autophagy protein 16 (ATG16) DUF1664 PF07889.12 RKO88862.1 - 0.18 11.8 5.2 0.55 10.3 0.0 3.4 3 1 1 4 4 4 0 Protein of unknown function (DUF1664) Cas_DxTHG PF09455.10 RKO88862.1 - 0.33 10.5 1.7 0.52 9.8 1.7 1.2 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family Arf PF00025.21 RKO88863.1 - 7.3e-48 162.3 0.0 8.9e-48 162.0 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 RKO88863.1 - 1.3e-13 50.8 0.0 1.8e-13 50.4 0.0 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO88863.1 - 3.8e-13 49.7 0.0 6.5e-13 49.0 0.0 1.4 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 RKO88863.1 - 5.8e-11 42.1 0.1 4.4e-08 32.7 0.0 2.3 1 1 1 2 2 2 2 G-protein alpha subunit MMR_HSR1 PF01926.23 RKO88863.1 - 8.2e-10 38.8 0.0 1.2e-09 38.3 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 RKO88863.1 - 3.4e-09 36.4 0.0 4.5e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 RKO88863.1 - 5e-09 35.9 0.0 6e-09 35.6 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 RKO88863.1 - 5.8e-08 32.5 0.0 1.8e-05 24.4 0.0 2.0 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 RKO88863.1 - 0.0071 15.9 0.1 0.026 14.0 0.1 1.9 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_18 PF13238.6 RKO88863.1 - 0.011 16.2 0.0 0.019 15.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain MMR_HSR1_Xtn PF16897.5 RKO88863.1 - 0.064 13.3 0.1 7 6.7 0.0 2.2 1 1 1 2 2 2 0 C-terminal region of MMR_HSR1 domain NACHT PF05729.12 RKO88863.1 - 0.16 11.9 0.0 20 5.1 0.0 2.2 2 0 0 2 2 2 0 NACHT domain PduV-EutP PF10662.9 RKO88863.1 - 0.17 11.6 0.0 5.3 6.8 0.0 2.5 2 1 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation DUF4407 PF14362.6 RKO88865.1 - 0.026 13.9 18.4 0.07 12.5 11.5 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4407) DUF2564 PF10819.8 RKO88865.1 - 0.028 14.8 8.7 1.2 9.5 0.1 3.3 1 1 2 3 3 3 0 Protein of unknown function (DUF2564) CCD PF07860.11 RKO88865.1 - 0.032 14.3 1.8 0.099 12.7 0.4 2.3 2 0 0 2 2 2 0 WisP family C-Terminal Region ABC_tran_Xtn PF12848.7 RKO88865.1 - 0.11 12.5 0.3 0.11 12.5 0.3 3.0 2 0 0 2 2 2 0 ABC transporter TEX12 PF15219.6 RKO88865.1 - 0.19 12.0 4.3 1.5 9.2 0.6 3.4 2 1 1 3 3 3 0 Testis-expressed 12 Peptidase_S15 PF02129.18 RKO88865.1 - 1.7 8.1 6.8 0.63 9.6 1.8 2.5 3 0 0 3 3 3 0 X-Pro dipeptidyl-peptidase (S15 family) CENP-F_leu_zip PF10473.9 RKO88865.1 - 1.9 8.5 26.4 0.026 14.5 4.6 3.3 2 1 1 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HrpB7 PF09486.10 RKO88865.1 - 3.7 7.9 11.4 3.7 7.9 0.5 2.8 2 1 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) DUF2379 PF09543.10 RKO88865.1 - 9.5 6.4 8.6 1.6 8.9 1.3 2.9 3 1 1 4 4 4 0 Protein of unknown function (DUF2379) AraC_N PF06719.13 RKO88866.1 - 1.9e-07 30.8 0.0 1.6 8.4 0.0 5.9 1 1 3 5 5 5 2 AraC-type transcriptional regulator N-terminus FLYWCH_N PF15423.6 RKO88866.1 - 9.4e-05 22.5 3.4 38 4.5 0.0 6.9 3 2 4 8 8 8 0 FLYWCH-type zinc finger-containing protein AraC_binding PF02311.19 RKO88866.1 - 0.00014 21.8 2.5 0.39 10.6 0.1 4.9 4 1 1 5 5 5 1 AraC-like ligand binding domain DUF3447 PF11929.8 RKO88866.1 - 0.00018 21.4 2.2 4.5 7.3 0.1 5.0 3 3 2 5 5 5 2 Domain of unknown function (DUF3447) DUF1102 PF06510.11 RKO88866.1 - 0.015 15.5 11.3 2.3 8.4 1.5 4.9 1 1 2 5 5 5 0 Protein of unknown function (DUF1102) RDM PF11002.8 RKO88866.1 - 0.12 12.4 0.8 88 3.2 0.0 4.1 4 0 0 4 4 4 0 RFPL defining motif (RDM) FlaE PF07559.14 RKO88866.1 - 0.27 11.8 4.2 15 6.2 0.2 3.8 2 2 0 2 2 2 0 Flagellar basal body protein FlaE DUF4116 PF13475.6 RKO88866.1 - 0.29 10.9 1.9 4.9 7.0 0.0 3.9 4 0 0 4 4 4 0 Domain of unknown function (DUF4116) WASH_WAHD PF11945.8 RKO88867.1 - 0.027 14.0 0.7 0.027 14.0 0.7 1.8 1 1 0 2 2 2 0 WAHD domain of WASH complex DUF1664 PF07889.12 RKO88867.1 - 0.047 13.7 4.6 0.12 12.4 3.3 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) HALZ PF02183.18 RKO88867.1 - 0.059 13.6 0.9 0.38 11.0 0.2 2.2 2 0 0 2 2 2 0 Homeobox associated leucine zipper JIP_LZII PF16471.5 RKO88867.1 - 0.064 13.4 0.2 0.064 13.4 0.2 2.7 2 1 0 2 2 2 0 JNK-interacting protein leucine zipper II FlaC_arch PF05377.11 RKO88867.1 - 0.067 13.6 3.4 14 6.2 0.1 3.5 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) TolA_bind_tri PF16331.5 RKO88867.1 - 0.11 12.6 6.1 3.9 7.6 0.1 3.2 3 0 0 3 3 3 0 TolA binding protein trimerisation SMC_Nse1 PF07574.13 RKO88867.1 - 0.12 12.3 5.0 0.093 12.6 0.6 2.1 1 1 1 2 2 2 0 Nse1 non-SMC component of SMC5-6 complex PRKG1_interact PF15898.5 RKO88867.1 - 0.26 12.2 5.9 5.5 7.9 3.3 2.5 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain CALCOCO1 PF07888.11 RKO88867.1 - 0.27 10.1 5.6 0.36 9.6 5.6 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like CtIP_N PF10482.9 RKO88867.1 - 0.61 10.1 5.9 0.61 10.2 1.8 2.1 2 0 0 2 2 2 0 Tumour-suppressor protein CtIP N-terminal domain bZIP_1 PF00170.21 RKO88867.1 - 0.66 10.1 3.1 2.4 8.3 0.1 2.8 3 0 0 3 3 3 0 bZIP transcription factor SIKE PF05769.11 RKO88867.1 - 0.8 9.6 7.1 2 8.3 0.3 2.2 1 1 1 2 2 2 0 SIKE family Mto2_bdg PF12808.7 RKO88867.1 - 1.1 9.6 4.2 0.62 10.4 0.4 2.4 3 0 0 3 3 3 0 Micro-tubular organiser Mto1 C-term Mto2-binding region DivIC PF04977.15 RKO88867.1 - 1.8 8.4 7.3 1.3 8.8 0.3 3.1 3 0 0 3 3 3 0 Septum formation initiator DUF4140 PF13600.6 RKO88867.1 - 7 7.2 10.3 15 6.1 2.2 3.4 2 1 0 3 3 2 0 N-terminal domain of unknown function (DUF4140) AMP-binding PF00501.28 RKO88869.1 - 5.4e-33 114.2 0.0 6e-33 114.1 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme MFS_1 PF07690.16 RKO88870.1 - 3.8e-58 197.1 47.2 5.5e-40 137.4 17.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 RKO88870.1 - 2.9e-12 46.1 18.3 2e-10 40.1 0.6 2.6 2 1 0 2 2 2 2 MFS_1 like family OATP PF03137.20 RKO88870.1 - 3.9e-08 32.0 18.7 2.3e-05 22.9 0.0 4.1 2 2 1 4 4 4 3 Organic Anion Transporter Polypeptide (OATP) family BcsB PF03170.13 RKO88871.1 - 0.087 11.2 0.2 0.11 10.8 0.2 1.1 1 0 0 1 1 1 0 Bacterial cellulose synthase subunit MFS_1 PF07690.16 RKO88873.1 - 8.5e-09 34.8 11.0 1.1e-08 34.4 11.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Parecho_VpG PF06344.11 RKO88874.1 - 0.6 10.8 6.5 2.6 8.9 0.1 3.1 4 0 0 4 4 4 0 Parechovirus Genome-linked protein ABC_membrane PF00664.23 RKO88876.1 - 3.3e-68 230.3 26.2 9.4e-37 127.1 9.3 2.1 2 0 0 2 2 2 2 ABC transporter transmembrane region ABC_tran PF00005.27 RKO88876.1 - 7.7e-48 162.5 0.0 9.4e-26 91.0 0.0 2.4 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 RKO88876.1 - 4.5e-09 36.1 0.4 0.83 9.0 0.0 4.2 4 0 0 4 4 4 3 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 RKO88876.1 - 7.6e-07 29.2 0.1 0.018 15.1 0.0 2.6 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_23 PF13476.6 RKO88876.1 - 1.1e-06 29.3 0.3 0.03 14.8 0.1 2.3 2 0 0 2 2 2 2 AAA domain Dynamin_N PF00350.23 RKO88876.1 - 4e-05 23.7 1.2 0.059 13.4 0.1 2.3 2 0 0 2 2 2 2 Dynamin family AAA_29 PF13555.6 RKO88876.1 - 6.5e-05 22.6 0.2 0.19 11.5 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.6 RKO88876.1 - 7e-05 22.8 0.0 0.054 13.3 0.0 2.9 3 0 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 RKO88876.1 - 7.5e-05 22.7 0.1 0.032 14.2 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 RKO88876.1 - 0.00031 21.2 0.0 0.43 10.9 0.0 2.8 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 RKO88876.1 - 0.0014 18.9 0.2 1 9.6 0.0 3.0 3 0 0 3 3 2 1 AAA domain AAA_24 PF13479.6 RKO88876.1 - 0.0061 16.3 0.0 0.096 12.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 RKO88876.1 - 0.015 15.8 0.1 1.4 9.5 0.0 2.7 2 0 0 2 2 2 0 AAA domain MeaB PF03308.16 RKO88876.1 - 0.021 13.8 0.1 4.3 6.2 0.0 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_7 PF12775.7 RKO88876.1 - 0.051 13.1 0.0 5.6 6.4 0.0 2.3 2 0 0 2 2 2 0 P-loop containing dynein motor region NB-ARC PF00931.22 RKO88876.1 - 0.055 12.6 0.1 1.6 7.9 0.0 2.3 2 0 0 2 2 2 0 NB-ARC domain AAA_33 PF13671.6 RKO88876.1 - 0.056 13.6 0.1 1.9 8.6 0.0 2.7 3 0 0 3 3 2 0 AAA domain AAA_30 PF13604.6 RKO88876.1 - 0.075 12.8 0.6 16 5.2 0.5 3.1 2 1 0 2 2 2 0 AAA domain AAA_15 PF13175.6 RKO88876.1 - 0.1 12.3 0.1 0.74 9.5 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain cobW PF02492.19 RKO88876.1 - 0.11 12.1 0.2 2.1 7.9 0.0 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DUF87 PF01935.17 RKO88876.1 - 0.11 12.6 0.1 0.62 10.1 0.0 2.1 2 0 0 2 2 2 0 Helicase HerA, central domain KAP_NTPase PF07693.14 RKO88876.1 - 0.11 11.7 0.0 5.9 6.0 0.0 2.3 2 0 0 2 2 2 0 KAP family P-loop domain Peptidase_S37 PF05576.11 RKO88876.1 - 0.12 11.0 0.0 0.2 10.3 0.0 1.2 1 0 0 1 1 1 0 PS-10 peptidase S37 T2SSE PF00437.20 RKO88876.1 - 0.17 10.9 0.0 2.2 7.2 0.0 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 RKO88876.1 - 0.18 11.2 0.7 1.1 8.5 0.0 2.4 3 0 0 3 3 3 0 FtsK/SpoIIIE family RNA_helicase PF00910.22 RKO88876.1 - 0.18 12.2 0.0 18 5.8 0.0 2.6 2 0 0 2 2 2 0 RNA helicase Zeta_toxin PF06414.12 RKO88876.1 - 0.24 10.7 0.1 3.9 6.7 0.0 2.2 2 0 0 2 2 2 0 Zeta toxin MIF4G PF02854.19 RKO88879.1 - 3.3e-18 66.1 0.1 8.2e-10 38.7 0.1 2.2 1 1 1 2 2 2 2 MIF4G domain Mito_carr PF00153.27 RKO88880.1 - 1e-25 89.4 0.0 6.8e-16 58.0 0.0 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein SelR PF01641.18 RKO88886.1 - 1.1e-24 86.9 0.2 1.2e-24 86.7 0.2 1.0 1 0 0 1 1 1 1 SelR domain zf-Mss51 PF13824.6 RKO88886.1 - 0.028 14.5 2.7 0.46 10.6 0.8 2.7 2 1 1 3 3 3 0 Zinc-finger of mitochondrial splicing suppressor 51 NCD3G PF07562.14 RKO88886.1 - 0.062 13.3 1.5 0.085 12.8 1.5 1.3 1 0 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR UBM PF14377.6 RKO88887.1 - 0.082 12.4 0.9 7.9 6.1 0.0 3.1 3 0 0 3 3 3 0 Ubiquitin binding region Med31 PF05669.12 RKO88888.1 - 2.2e-33 114.1 6.3 2.4e-33 114.0 6.3 1.0 1 0 0 1 1 1 1 SOH1 Vps55 PF04133.14 RKO88890.1 - 8.4e-30 103.1 5.9 1.1e-29 102.8 5.9 1.1 1 0 0 1 1 1 1 Vacuolar protein sorting 55 GN3L_Grn1 PF08701.11 RKO88891.1 - 1.5e-21 76.2 9.5 1.8e-21 76.0 9.5 1.1 1 0 0 1 1 1 1 GNL3L/Grn1 putative GTPase MMR_HSR1 PF01926.23 RKO88892.1 - 6.1e-18 65.0 0.2 6.7e-14 51.9 0.0 2.4 2 0 0 2 2 2 2 50S ribosome-binding GTPase FeoB_N PF02421.18 RKO88892.1 - 3.4e-10 39.7 0.3 1e-07 31.6 0.0 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.27 RKO88892.1 - 1.4e-05 24.8 0.6 0.00023 20.7 0.3 2.6 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 RKO88892.1 - 1.5e-05 25.0 0.7 0.046 13.6 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase Dynamin_N PF00350.23 RKO88892.1 - 0.00016 21.8 3.5 0.024 14.7 0.9 3.6 3 1 1 4 4 4 1 Dynamin family AIG1 PF04548.16 RKO88892.1 - 0.0014 18.0 0.4 0.003 16.9 0.1 1.6 2 0 0 2 2 2 1 AIG1 family cobW PF02492.19 RKO88892.1 - 0.018 14.6 0.1 0.29 10.7 0.0 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 RKO88892.1 - 0.049 14.0 0.0 0.13 12.6 0.0 1.8 1 0 0 1 1 1 0 AAA ATPase domain Arf PF00025.21 RKO88892.1 - 0.05 13.1 0.4 6.8 6.1 0.0 2.2 2 0 0 2 2 2 0 ADP-ribosylation factor family AGP PF06376.12 RKO88893.1 - 0.23 11.4 0.1 0.44 10.4 0.1 1.5 1 0 0 1 1 1 0 Arabinogalactan peptide RicinB_lectin_2 PF14200.6 RKO88895.1 - 1.5e-12 48.1 0.1 2.2e-09 37.9 0.0 2.2 1 1 1 2 2 2 2 Ricin-type beta-trefoil lectin domain-like Ricin_B_lectin PF00652.22 RKO88895.1 - 0.00091 19.5 0.0 0.002 18.3 0.0 1.6 1 1 0 1 1 1 1 Ricin-type beta-trefoil lectin domain SpoIIE PF07228.12 RKO88896.1 - 2.3e-12 47.3 0.0 3e-12 46.9 0.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) PP2C PF00481.21 RKO88896.1 - 3.1e-12 46.7 0.0 7.2e-06 25.8 0.0 2.1 2 0 0 2 2 2 2 Protein phosphatase 2C PP2C_2 PF13672.6 RKO88896.1 - 5.2e-05 23.0 0.0 6.2e-05 22.7 0.0 1.3 1 1 0 1 1 1 1 Protein phosphatase 2C Peptidase_M24 PF00557.24 RKO88897.1 - 3e-51 174.1 0.1 3.6e-51 173.8 0.1 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 zf-C6H2 PF15801.5 RKO88897.1 - 4.8e-16 58.8 7.4 9e-16 57.9 7.4 1.5 1 0 0 1 1 1 1 zf-MYND-like zinc finger, mRNA-binding zf-HIT PF04438.16 RKO88897.1 - 0.0001 22.1 3.8 0.0001 22.1 3.8 2.1 2 0 0 2 2 2 1 HIT zinc finger zf-MYND PF01753.18 RKO88897.1 - 0.00051 20.1 5.9 0.0013 18.8 5.9 1.7 1 0 0 1 1 1 1 MYND finger DZR PF12773.7 RKO88897.1 - 0.37 10.8 6.9 1.1 9.3 6.9 1.8 1 0 0 1 1 1 0 Double zinc ribbon zf-4CXXC_R1 PF10497.9 RKO88899.1 - 1.2e-22 80.0 5.4 2.1e-22 79.2 5.4 1.4 1 0 0 1 1 1 1 Zinc-finger domain of monoamine-oxidase A repressor R1 DUF5525 PF17663.1 RKO88899.1 - 0.00039 18.7 6.1 0.00055 18.2 6.1 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5525) RR_TM4-6 PF06459.12 RKO88899.1 - 0.037 13.9 0.4 0.037 13.9 0.4 1.9 2 0 0 2 2 2 0 Ryanodine Receptor TM 4-6 DUF4653 PF15546.6 RKO88899.1 - 1.3 8.6 10.2 0.2 11.3 6.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4653) PHD_4 PF16866.5 RKO88899.1 - 2.9 8.1 9.4 0.091 12.9 2.6 2.0 2 0 0 2 2 2 0 PHD-finger Phosducin PF02114.16 RKO88900.1 - 4.2e-14 52.1 0.0 5.3e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 Phosducin Thioredoxin PF00085.20 RKO88900.1 - 0.0025 17.8 0.0 0.004 17.1 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin COP-gamma_platf PF08752.10 RKO88900.1 - 0.06 13.5 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Coatomer gamma subunit appendage platform subdomain Sun2_CC2 PF18580.1 RKO88900.1 - 1.2 9.4 4.6 26 5.2 0.3 3.3 3 1 0 3 3 3 0 SUN2 coiled coil domain 2 Copper-fist PF00649.18 RKO88901.1 - 8.2e-15 54.0 2.4 1.2e-14 53.5 2.4 1.3 1 0 0 1 1 1 1 Copper fist DNA binding domain Phage_Coat_Gp8 PF05371.12 RKO88904.1 - 0.095 12.5 0.2 0.095 12.5 0.2 2.1 2 0 0 2 2 2 0 Phage major coat protein, Gp8 peroxidase PF00141.23 RKO88906.1 - 0.0074 16.0 0.0 0.017 14.8 0.0 1.6 1 1 0 1 1 1 1 Peroxidase zf-C2H2_aberr PF17017.5 RKO88907.1 - 0.001 19.3 0.4 0.001 19.3 0.4 2.0 2 0 0 2 2 2 1 Aberrant zinc-finger Metallothio_Cad PF07846.11 RKO88908.1 - 0.21 11.7 9.3 10 6.3 0.6 4.0 2 1 2 4 4 4 0 Metallothionein family Lustrin_cystein PF14625.6 RKO88913.1 - 0.092 13.1 0.3 0.092 13.1 0.3 1.8 2 0 0 2 2 2 0 Lustrin, cysteine-rich repeated domain tRNA-synt_2 PF00152.20 RKO88915.1 - 1.6e-09 37.3 0.0 1.7e-09 37.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) FAD_binding_2 PF00890.24 RKO88918.1 - 5.7e-126 421.0 3.0 7.3e-126 420.6 3.0 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 RKO88918.1 - 3.9e-44 149.7 2.0 5.9e-44 149.1 2.0 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term GIDA PF01134.22 RKO88918.1 - 3.4e-06 26.4 1.2 0.0036 16.4 1.6 2.3 2 0 0 2 2 2 2 Glucose inhibited division protein A Thi4 PF01946.17 RKO88918.1 - 3.5e-05 23.2 0.3 0.011 15.1 0.1 2.5 2 0 0 2 2 2 2 Thi4 family Pyr_redox_2 PF07992.14 RKO88918.1 - 0.0003 20.1 2.0 0.0019 17.5 0.0 2.9 3 1 1 4 4 4 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 RKO88918.1 - 0.0052 16.1 0.6 0.0091 15.3 0.1 1.6 2 0 0 2 2 2 1 FAD binding domain Lycopene_cycl PF05834.12 RKO88918.1 - 0.025 13.6 0.1 0.075 12.1 0.0 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein HI0933_like PF03486.14 RKO88918.1 - 0.059 12.1 1.1 0.22 10.2 0.5 2.3 3 0 0 3 3 3 0 HI0933-like protein DAO PF01266.24 RKO88918.1 - 0.08 12.5 0.7 0.15 11.6 0.7 1.6 1 1 0 1 1 1 0 FAD dependent oxidoreductase Usp PF00582.26 RKO88919.1 - 7.5e-13 49.2 0.8 9.7e-13 48.8 0.8 1.3 1 1 0 1 1 1 1 Universal stress protein family Usp PF00582.26 RKO88921.1 - 3.2e-14 53.6 2.3 2.4e-08 34.6 0.3 2.3 1 1 1 2 2 2 2 Universal stress protein family Usp PF00582.26 RKO88922.1 - 0.00039 20.9 0.1 0.00048 20.7 0.1 1.2 1 0 0 1 1 1 1 Universal stress protein family DUF563 PF04577.14 RKO88923.1 - 2.5e-08 34.3 0.0 2.2e-06 27.9 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF563) Mannosyl_trans3 PF11051.8 RKO88924.1 - 7.5e-21 74.7 0.0 3.1e-17 62.8 0.0 3.6 3 1 0 3 3 3 2 Mannosyltransferase putative CLN3 PF02487.17 RKO88924.1 - 0.00017 20.8 0.1 0.00017 20.8 0.1 2.1 1 1 1 2 2 2 1 CLN3 protein PKK PF12474.8 RKO88926.1 - 0.27 11.4 14.9 0.59 10.3 8.8 2.7 1 1 1 2 2 2 0 Polo kinase kinase ADIP PF11559.8 RKO88926.1 - 9 6.4 16.8 0.23 11.5 2.9 3.2 2 1 2 4 4 4 0 Afadin- and alpha -actinin-Binding E1-E2_ATPase PF00122.20 RKO88927.1 - 1.5e-46 158.2 3.2 1.5e-46 158.2 3.2 2.9 4 1 1 5 5 5 1 E1-E2 ATPase Hydrolase PF00702.26 RKO88927.1 - 8.7e-19 68.6 0.0 1.9e-18 67.5 0.0 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 RKO88927.1 - 2.5e-13 49.5 0.4 8.6e-13 47.8 0.0 2.1 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus adh_short PF00106.25 RKO88928.1 - 4.8e-33 114.3 0.1 2.3e-32 112.1 0.1 1.8 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO88928.1 - 4.1e-18 65.8 0.2 1.4e-17 64.0 0.2 1.7 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 RKO88928.1 - 9.2e-06 25.7 0.1 1.4e-05 25.1 0.1 1.3 1 0 0 1 1 1 1 KR domain DUF4152 PF13680.6 RKO88928.1 - 0.06 12.7 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4152) Amino_oxidase PF01593.24 RKO88930.1 - 5.8e-19 68.7 0.0 7.3e-19 68.4 0.0 1.1 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 RKO88930.1 - 7.1e-14 51.8 0.0 1.4e-13 50.9 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 RKO88930.1 - 1.1e-05 25.2 0.1 0.0052 16.4 0.0 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 RKO88930.1 - 0.0013 18.1 0.1 0.021 14.0 0.1 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 RKO88930.1 - 0.0023 17.9 0.3 0.17 11.9 0.1 2.3 2 0 0 2 2 2 1 FAD-NAD(P)-binding Prenylcys_lyase PF07156.14 RKO88930.1 - 0.022 13.9 0.6 0.052 12.6 0.6 1.5 1 1 0 1 1 1 0 Prenylcysteine lyase FAD_binding_2 PF00890.24 RKO88930.1 - 0.034 13.2 0.0 2.7 7.0 0.0 2.1 2 0 0 2 2 2 0 FAD binding domain TrkA_C PF02080.21 RKO88930.1 - 0.14 12.0 0.0 0.66 9.9 0.1 2.0 2 0 0 2 2 2 0 TrkA-C domain Cytomega_UL84 PF06284.11 RKO88930.1 - 2 6.8 5.4 3.5 6.0 5.4 1.3 1 0 0 1 1 1 0 Cytomegalovirus UL84 protein Abhydrolase_1 PF00561.20 RKO88931.1 - 5.1e-22 78.8 0.0 3e-20 73.0 0.1 2.2 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 RKO88931.1 - 8.3e-15 54.8 0.0 2e-14 53.6 0.0 1.6 1 0 0 1 1 1 1 TAP-like protein Polysacc_deac_1 PF01522.21 RKO88933.1 - 1.3e-06 28.3 0.0 3.4e-06 27.0 0.0 1.7 1 0 0 1 1 1 1 Polysaccharide deacetylase SH3_1 PF00018.28 RKO88934.1 - 2.2e-09 36.7 0.0 4.4e-09 35.8 0.0 1.5 1 0 0 1 1 1 1 SH3 domain SH3_9 PF14604.6 RKO88934.1 - 3.9e-06 26.6 0.0 8.3e-06 25.6 0.0 1.6 1 0 0 1 1 1 1 Variant SH3 domain Kelch_6 PF13964.6 RKO88934.1 - 8.8e-05 22.7 10.5 2.1 8.7 0.0 5.9 6 0 0 6 6 6 2 Kelch motif SH3_2 PF07653.17 RKO88934.1 - 0.012 15.3 0.0 0.025 14.3 0.0 1.6 1 0 0 1 1 1 0 Variant SH3 domain Herpes_UL1 PF05259.11 RKO88934.1 - 0.16 12.1 0.6 0.64 10.1 0.2 2.2 2 0 0 2 2 2 0 Herpesvirus glycoprotein L Kelch_3 PF13415.6 RKO88934.1 - 0.17 12.2 13.5 3.7 8.0 0.4 5.5 5 1 0 5 5 5 0 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO88934.1 - 0.19 11.4 11.6 0.22 11.2 0.1 5.0 5 0 0 5 5 5 0 Kelch motif Kelch_4 PF13418.6 RKO88934.1 - 0.19 11.7 16.7 4.2 7.4 0.2 5.4 6 1 0 6 6 6 0 Galactose oxidase, central domain SKG6 PF08693.10 RKO88934.1 - 0.38 10.2 2.5 0.84 9.1 2.5 1.6 1 0 0 1 1 1 0 Transmembrane alpha-helix domain CDC45 PF02724.14 RKO88935.1 - 0.18 10.0 3.5 0.18 10.1 3.5 1.0 1 0 0 1 1 1 0 CDC45-like protein Nop14 PF04147.12 RKO88935.1 - 0.35 9.0 7.2 0.38 8.9 7.2 1.0 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 RKO88935.1 - 2.4 7.5 9.1 2.8 7.3 9.1 1.1 1 0 0 1 1 1 0 SDA1 DNA_pol_phi PF04931.13 RKO88935.1 - 7.8 4.5 16.6 9.5 4.2 16.6 1.0 1 0 0 1 1 1 0 DNA polymerase phi TPR_14 PF13428.6 RKO88936.1 - 0.068 14.0 0.4 1 10.3 0.1 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat Wzy_C_2 PF11846.8 RKO88936.1 - 0.095 12.6 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal PPR_2 PF13041.6 RKO88937.1 - 0.0033 17.6 0.0 0.044 14.0 0.0 2.8 3 0 0 3 3 3 1 PPR repeat family PPR_3 PF13812.6 RKO88937.1 - 0.012 15.6 0.0 0.051 13.6 0.0 2.0 1 1 1 2 2 2 0 Pentatricopeptide repeat domain Tox-MPTase5 PF15641.6 RKO88937.1 - 0.017 15.2 0.1 0.052 13.6 0.0 1.8 2 0 0 2 2 2 0 Metallopeptidase toxin 5 Tyrosinase PF00264.20 RKO88938.1 - 1.7e-16 61.2 16.4 2.4e-08 34.6 1.1 2.1 1 1 1 2 2 2 2 Common central domain of tyrosinase RIO1 PF01163.22 RKO88941.1 - 7.6e-48 162.6 0.0 1.1e-47 162.0 0.0 1.2 1 0 0 1 1 1 1 RIO1 family Rio2_N PF09202.11 RKO88941.1 - 6.6e-35 119.2 0.2 1.2e-34 118.3 0.2 1.5 1 0 0 1 1 1 1 Rio2, N-terminal APH PF01636.23 RKO88941.1 - 7.4e-09 35.9 0.2 0.00047 20.1 0.1 2.8 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 RKO88941.1 - 1.1e-06 28.2 0.1 0.00025 20.5 0.1 2.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family DUF2513 PF10711.9 RKO88941.1 - 0.15 12.4 0.0 0.45 10.8 0.0 1.8 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) CBM_10 PF02013.16 RKO88942.1 - 1.3e-06 28.8 1.2 0.0027 18.2 0.0 2.4 2 0 0 2 2 2 2 Cellulose or protein binding domain IGPS PF00218.21 RKO88944.1 - 9.8e-87 290.3 0.0 1.5e-86 289.8 0.0 1.3 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase GATase PF00117.28 RKO88944.1 - 2.4e-48 164.5 0.0 3.4e-48 164.0 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 RKO88944.1 - 1.6e-06 28.1 0.3 4.6e-06 26.6 0.3 1.7 1 1 0 1 1 1 1 Peptidase C26 QRPTase_C PF01729.19 RKO88944.1 - 0.067 13.0 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain FMN_dh PF01070.18 RKO88944.1 - 0.067 12.2 0.3 0.1 11.6 0.3 1.3 1 0 0 1 1 1 0 FMN-dependent dehydrogenase Chorismate_bind PF00425.18 RKO88945.1 - 5.5e-96 321.1 0.0 3.7e-95 318.4 0.0 2.1 2 0 0 2 2 2 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 RKO88945.1 - 1.2e-30 106.6 0.1 4.9e-28 98.1 0.0 3.4 3 1 0 3 3 3 2 Anthranilate synthase component I, N terminal region Lipase_3 PF01764.25 RKO88946.1 - 1.6e-29 102.6 0.0 2.2e-29 102.2 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO88946.1 - 0.00011 21.9 0.8 0.00071 19.2 0.8 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 RKO88946.1 - 0.0029 16.9 0.2 0.029 13.6 0.1 2.1 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Chlorophyllase PF07224.11 RKO88946.1 - 0.055 12.5 0.1 0.26 10.3 0.0 2.0 2 0 0 2 2 2 0 Chlorophyllase Esterase PF00756.20 RKO88946.1 - 0.073 12.7 0.1 0.11 12.1 0.1 1.3 1 0 0 1 1 1 0 Putative esterase Abhydrolase_6 PF12697.7 RKO88946.1 - 0.078 13.6 5.8 0.063 13.9 4.2 1.6 1 1 1 2 2 2 0 Alpha/beta hydrolase family Lipase_3 PF01764.25 RKO88947.1 - 3.1e-19 69.3 0.0 4.3e-19 68.8 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO88947.1 - 1.6e-07 31.1 0.0 3.2e-07 30.1 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Abhydrolase_6 PF12697.7 RKO88947.1 - 0.00043 20.9 0.2 0.0005 20.7 0.2 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 RKO88947.1 - 0.0059 15.9 0.0 0.0081 15.4 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Chlorophyllase PF07224.11 RKO88947.1 - 0.017 14.1 0.0 0.025 13.6 0.0 1.3 1 0 0 1 1 1 0 Chlorophyllase Esterase PF00756.20 RKO88947.1 - 0.048 13.3 0.1 0.097 12.3 0.1 1.3 1 1 0 1 1 1 0 Putative esterase PGAP1 PF07819.13 RKO88947.1 - 0.048 13.4 0.1 0.12 12.1 0.1 1.5 1 1 1 2 2 2 0 PGAP1-like protein DUF4470 PF14737.6 RKO88948.1 - 0.00013 22.0 0.0 0.00027 21.1 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4470) Dynamitin PF04912.14 RKO88950.1 - 0.0051 16.2 0.4 0.0079 15.6 0.4 1.2 1 0 0 1 1 1 1 Dynamitin DUF1192 PF06698.11 RKO88950.1 - 0.0094 16.0 0.3 0.049 13.7 0.0 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF1192) Syntaxin_2 PF14523.6 RKO88950.1 - 0.11 12.9 0.7 9.8 6.6 0.0 2.2 2 0 0 2 2 2 0 Syntaxin-like protein p450 PF00067.22 RKO88952.1 - 4.5e-41 141.1 0.0 5.2e-41 140.9 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 Dynactin_p62 PF05502.13 RKO88954.1 - 4.5e-17 62.0 11.4 6.2e-17 61.5 11.4 1.1 1 0 0 1 1 1 1 Dynactin p62 family F-box-like PF12937.7 RKO88954.1 - 1.4e-07 31.2 0.1 4.7e-07 29.6 0.1 1.9 1 0 0 1 1 1 1 F-box-like LRR_4 PF12799.7 RKO88954.1 - 3.9 8.0 9.7 25 5.5 0.0 4.2 4 1 1 5 5 5 0 Leucine Rich repeats (2 copies) Methyltransf_16 PF10294.9 RKO88957.1 - 5.8e-13 49.0 0.0 6.7e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_23 PF13489.6 RKO88957.1 - 1.3e-06 28.4 0.0 1.6e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 RKO88957.1 - 6.1e-06 26.9 0.0 2e-05 25.2 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 RKO88957.1 - 1.4e-05 25.7 0.0 2.6e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 RKO88957.1 - 0.042 13.1 0.0 0.048 12.9 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase domain Methyltransf_31 PF13847.6 RKO88957.1 - 0.045 13.5 0.0 0.08 12.7 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 RKO88957.1 - 0.058 14.1 0.0 0.093 13.5 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_24 PF13578.6 RKO88957.1 - 0.12 13.4 0.0 0.19 12.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 RKO88957.1 - 0.14 11.5 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) SDA1 PF05285.12 RKO88958.1 - 9.8e-42 143.6 66.2 1.2e-38 133.5 30.1 4.2 2 2 1 3 3 3 2 SDA1 NUC130_3NT PF08158.12 RKO88958.1 - 6.2e-22 77.7 3.1 1.4e-21 76.5 0.2 3.1 3 0 0 3 3 3 1 NUC130/3NT domain Cnd1 PF12717.7 RKO88958.1 - 0.17 11.9 5.9 1.1 9.2 1.8 3.0 1 1 1 2 2 2 0 non-SMC mitotic condensation complex subunit 1 Pkinase PF00069.25 RKO88960.1 - 1.2e-70 237.9 0.0 1.4e-70 237.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO88960.1 - 5e-36 124.3 0.0 6.1e-36 124.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO88960.1 - 2.3e-07 30.5 0.0 3.7e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 RKO88960.1 - 0.00066 19.7 0.0 0.004 17.1 0.0 2.0 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 RKO88960.1 - 0.00078 18.8 0.0 0.0061 15.9 0.0 2.0 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 RKO88960.1 - 0.0031 16.5 0.0 0.0039 16.2 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Ribosomal_L7Ae PF01248.26 RKO88960.1 - 0.007 16.1 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Pkinase_fungal PF17667.1 RKO88960.1 - 0.1 11.3 0.0 0.13 11.0 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Choline_kinase PF01633.20 RKO88960.1 - 0.15 11.7 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase Asp PF00026.23 RKO88964.1 - 4.6e-35 121.6 0.5 5.4e-35 121.3 0.5 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO88964.1 - 0.0029 17.9 0.1 0.057 13.7 0.1 2.2 1 1 0 1 1 1 1 Xylanase inhibitor N-terminal PB1 PF00564.24 RKO88965.1 - 2.6e-06 27.3 0.0 3.4e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 PB1 domain CLASP_N PF12348.8 RKO88966.1 - 3.7e-22 79.0 0.9 6.7e-15 55.3 0.0 2.5 3 0 0 3 3 3 2 CLASP N terminal IFRD PF05004.13 RKO88966.1 - 0.00019 20.7 0.4 0.00036 19.7 0.0 1.6 2 0 0 2 2 2 1 Interferon-related developmental regulator (IFRD) HEAT PF02985.22 RKO88966.1 - 0.00038 20.5 6.1 0.046 14.0 0.1 4.4 4 0 0 4 4 4 1 HEAT repeat HEAT_2 PF13646.6 RKO88966.1 - 0.00042 20.7 9.1 1.2 9.5 0.4 4.0 3 1 0 3 3 3 2 HEAT repeats RasGEF_N_2 PF14663.6 RKO88966.1 - 0.00084 19.7 0.2 0.11 12.9 0.0 2.5 1 1 1 2 2 2 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain MMS19_N PF14500.6 RKO88966.1 - 0.017 14.8 0.1 0.038 13.6 0.1 1.5 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II MMS19_C PF12460.8 RKO88966.1 - 0.077 12.1 1.1 0.15 11.1 1.1 1.5 1 0 0 1 1 1 0 RNAPII transcription regulator C-terminal DUF2312 PF10073.9 RKO88966.1 - 0.16 11.6 0.3 0.61 9.8 0.1 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) RTP1_C1 PF10363.9 RKO88966.1 - 0.31 11.2 1.1 5.1 7.3 0.2 3.0 2 2 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 HEAT_EZ PF13513.6 RKO88966.1 - 1.5 9.4 3.9 5.3 7.7 0.2 3.2 2 1 0 2 2 2 0 HEAT-like repeat G10 PF01125.17 RKO88967.1 - 9.4e-68 226.6 3.5 1e-67 226.4 3.5 1.0 1 0 0 1 1 1 1 G10 protein LisH PF08513.11 RKO88967.1 - 0.26 11.3 0.2 0.26 11.3 0.2 1.6 2 0 0 2 2 2 0 LisH Cyt-b5 PF00173.28 RKO88968.1 - 1.1e-14 54.3 0.3 1.5e-14 53.9 0.3 1.2 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain DS PF01916.17 RKO88969.1 - 1.7e-122 408.2 0.0 2e-122 408.0 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase Lipase_GDSL_2 PF13472.6 RKO88970.1 - 0.00087 19.7 0.0 0.00098 19.6 0.0 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family p450 PF00067.22 RKO88971.1 - 8.7e-39 133.5 0.0 9.5e-39 133.4 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 SUI1 PF01253.22 RKO88972.1 - 2.8e-26 91.8 0.3 4.1e-26 91.3 0.3 1.2 1 0 0 1 1 1 1 Translation initiation factor SUI1 Phage_integrase PF00589.22 RKO88973.1 - 0.012 15.4 0.0 0.042 13.6 0.0 1.8 1 1 0 1 1 1 0 Phage integrase family LRR_8 PF13855.6 RKO88974.1 - 2.7e-17 62.3 18.4 1.8e-08 34.0 2.4 4.0 4 0 0 4 4 4 3 Leucine rich repeat LRR_4 PF12799.7 RKO88974.1 - 2.2e-08 34.3 26.9 0.0039 17.6 1.8 5.6 3 2 1 5 5 5 4 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 RKO88974.1 - 0.0088 16.5 20.7 2.7 8.9 0.8 6.2 5 1 0 5 5 5 2 Leucine Rich Repeat Zot PF05707.12 RKO88975.1 - 0.00072 19.2 0.0 0.0021 17.7 0.0 1.7 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) AAA_22 PF13401.6 RKO88975.1 - 0.0017 18.6 0.0 0.6 10.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain DUF853 PF05872.12 RKO88975.1 - 0.043 12.4 0.0 0.067 11.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) AAA PF00004.29 RKO88975.1 - 0.061 13.7 0.0 0.61 10.5 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) DEAD PF00270.29 RKO88975.1 - 0.07 12.9 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 DEAD/DEAH box helicase Ribosomal_S8e PF01201.22 RKO88977.1 - 2e-53 180.3 1.5 2.4e-53 180.0 1.5 1.1 1 0 0 1 1 1 1 Ribosomal protein S8e Ank_4 PF13637.6 RKO88978.1 - 0.00031 21.3 0.0 0.13 12.9 0.0 3.1 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO88978.1 - 0.00037 20.7 0.0 1.3 9.8 0.0 3.5 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 RKO88978.1 - 0.0006 20.1 0.0 1.2 9.6 0.0 3.4 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO88978.1 - 0.02 15.4 0.0 0.076 13.6 0.0 1.9 2 0 0 2 2 2 0 Ankyrin repeats (3 copies) Cortex-I_coil PF09304.10 RKO88978.1 - 0.02 15.1 2.3 0.048 13.9 1.7 2.0 1 1 0 1 1 1 0 Cortexillin I, coiled coil Med9 PF07544.13 RKO88978.1 - 0.025 14.7 1.8 0.1 12.7 0.5 2.4 1 1 2 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 SF-assemblin PF06705.11 RKO88978.1 - 0.033 13.5 0.4 0.064 12.6 0.4 1.4 1 0 0 1 1 1 0 SF-assemblin/beta giardin ApoLp-III PF07464.11 RKO88978.1 - 0.064 13.4 0.6 0.15 12.1 0.2 1.8 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) ABC_tran_CTD PF16326.5 RKO88978.1 - 0.22 11.8 8.4 0.26 11.6 4.3 2.7 1 1 2 3 3 3 0 ABC transporter C-terminal domain FAM184 PF15665.5 RKO88978.1 - 0.99 9.1 9.4 0.047 13.5 4.0 1.5 2 0 0 2 2 2 0 Family with sequence similarity 184, A and B HalX PF08663.10 RKO88978.1 - 5.6 7.4 8.5 2.8 8.3 0.9 2.8 1 1 1 2 2 2 0 HalX domain OPT PF03169.15 RKO88981.1 - 5.6e-86 289.5 21.1 1.7e-85 287.9 21.1 1.7 1 1 0 1 1 1 1 OPT oligopeptide transporter protein DUF2929 PF11151.8 RKO88981.1 - 0.61 10.4 0.0 0.61 10.4 0.0 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF2929) Cation_ATPase_C PF00689.21 RKO88982.1 - 3.1e-26 92.2 2.3 3.6e-26 92.0 2.3 1.0 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus E1-E2_ATPase PF00122.20 RKO88983.1 - 3.8e-38 130.8 0.8 3.8e-38 130.8 0.8 2.1 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 RKO88983.1 - 1e-20 74.9 1.8 1.6e-10 41.6 0.1 2.7 1 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 RKO88983.1 - 9.7e-16 57.6 0.0 2.2e-15 56.5 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 RKO88983.1 - 7.9e-07 29.1 0.3 1.7e-06 28.0 0.3 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 RKO88983.1 - 0.00088 18.9 0.0 0.0017 18.0 0.0 1.5 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus HAD PF12710.7 RKO88983.1 - 0.0083 16.5 0.0 0.95 9.8 0.0 2.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cytochrom_B561 PF03188.16 RKO88984.1 - 1.5e-25 89.9 5.2 1.5e-25 89.9 5.2 1.6 2 0 0 2 2 2 1 Eukaryotic cytochrome b561 DUF4079 PF13301.6 RKO88984.1 - 0.0071 16.5 5.6 0.018 15.2 5.6 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF4079) Cytochrom_B561 PF03188.16 RKO88985.1 - 1.5e-12 47.8 4.4 2e-12 47.4 4.4 1.2 1 0 0 1 1 1 1 Eukaryotic cytochrome b561 UXS1_N PF11803.8 RKO88985.1 - 0.22 11.9 0.1 0.35 11.3 0.1 1.3 1 0 0 1 1 1 0 UDP-glucuronate decarboxylase N-terminal Piwi PF02171.17 RKO88986.1 - 1.1e-85 287.6 0.0 1.6e-85 287.0 0.0 1.3 1 0 0 1 1 1 1 Piwi domain ArgoN PF16486.5 RKO88986.1 - 1.8e-17 64.2 0.0 4.3e-17 63.0 0.0 1.7 1 0 0 1 1 1 1 N-terminal domain of argonaute ArgoL1 PF08699.10 RKO88986.1 - 9e-17 60.5 0.0 1.7e-16 59.6 0.0 1.5 1 0 0 1 1 1 1 Argonaute linker 1 domain PAZ PF02170.22 RKO88986.1 - 4.5e-15 55.7 0.0 8.2e-15 54.8 0.0 1.4 1 0 0 1 1 1 1 PAZ domain ArgoL2 PF16488.5 RKO88986.1 - 4.8e-14 52.4 0.1 1.5e-13 50.8 0.1 1.9 1 0 0 1 1 1 1 Argonaute linker 2 domain ArgoMid PF16487.5 RKO88986.1 - 6.3e-05 23.2 0.0 0.00014 22.1 0.0 1.5 1 0 0 1 1 1 1 Mid domain of argonaute FoP_duplication PF13865.6 RKO88986.1 - 9.7 6.8 18.8 0.53 10.9 13.3 1.7 2 0 0 2 2 2 0 C-terminal duplication domain of Friend of PRMT1 ANAPC4_WD40 PF12894.7 RKO88987.1 - 9.6e-09 35.4 0.7 0.0016 18.7 0.0 3.0 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 RKO88987.1 - 2.1e-08 34.6 3.2 0.00014 22.6 0.0 4.2 5 0 0 5 5 5 1 WD domain, G-beta repeat CPSF_A PF03178.15 RKO88987.1 - 0.018 14.4 0.0 0.057 12.7 0.0 1.7 2 0 0 2 2 2 0 CPSF A subunit region eIF2A PF08662.11 RKO88987.1 - 0.056 13.3 0.0 0.097 12.5 0.0 1.4 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 RKO88987.1 - 0.057 12.4 0.1 0.29 10.1 0.0 2.0 2 1 1 3 3 3 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Phage_T7_tail PF03906.14 RKO88989.1 - 0.083 12.5 0.0 0.25 11.0 0.0 1.8 2 0 0 2 2 2 0 Phage T7 tail fibre protein DUF572 PF04502.13 RKO88990.1 - 8.6 5.9 10.2 15 5.1 10.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF572) MMR_HSR1 PF01926.23 RKO88991.1 - 1.2e-05 25.3 0.0 2e-05 24.6 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 RKO88991.1 - 0.00016 21.8 0.0 0.15 12.1 0.0 2.3 1 1 0 2 2 2 2 Dynamin family RsgA_GTPase PF03193.16 RKO88991.1 - 0.0043 17.0 0.1 0.0099 15.8 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase YqfD PF06898.11 RKO88991.1 - 0.022 13.6 0.0 0.026 13.4 0.0 1.1 1 0 0 1 1 1 0 Putative stage IV sporulation protein YqfD Zeta_toxin PF06414.12 RKO88991.1 - 0.023 14.0 0.0 0.043 13.1 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin Septin PF00735.18 RKO88991.1 - 0.081 12.2 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 Septin AAA_22 PF13401.6 RKO88991.1 - 0.081 13.2 0.1 0.24 11.7 0.0 1.8 2 1 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 RKO88991.1 - 0.1 12.4 0.0 6.4 6.5 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein ABC_tran PF00005.27 RKO88991.1 - 0.14 12.7 0.0 0.31 11.6 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA_29 PF13555.6 RKO88991.1 - 0.15 11.9 0.0 0.38 10.5 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain Sel1 PF08238.12 RKO88992.1 - 2.3e-14 53.5 4.6 0.00039 21.0 0.1 6.9 7 1 0 7 7 7 4 Sel1 repeat GHMP_kinases_N PF00288.26 RKO88993.1 - 2.1e-12 47.1 1.3 2.1e-12 47.1 1.3 2.8 3 0 0 3 3 3 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 RKO88993.1 - 3.1e-07 30.7 0.1 1.1e-06 28.9 0.1 1.9 1 0 0 1 1 1 1 GHMP kinases C terminal F-box-like PF12937.7 RKO88994.1 - 0.0014 18.5 0.7 0.0033 17.3 0.7 1.6 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO88994.1 - 0.0031 17.4 0.3 0.0031 17.4 0.3 1.9 2 0 0 2 2 2 1 F-box domain F-box-like_2 PF13013.6 RKO88994.1 - 0.03 14.3 0.0 0.046 13.7 0.0 1.3 1 0 0 1 1 1 0 F-box-like domain MFS_1 PF07690.16 RKO88996.1 - 7.1e-42 143.6 54.4 2.5e-40 138.5 54.4 2.3 1 1 0 1 1 1 1 Major Facilitator Superfamily TRI12 PF06609.13 RKO88996.1 - 1.4e-16 60.1 28.2 1.7e-16 59.8 28.2 1.0 1 0 0 1 1 1 1 Fungal trichothecene efflux pump (TRI12) Sugar_tr PF00083.24 RKO88996.1 - 2.2e-14 53.2 12.8 2.2e-14 53.2 12.8 2.5 3 0 0 3 3 3 2 Sugar (and other) transporter OATP PF03137.20 RKO88996.1 - 0.0029 16.0 5.3 0.0029 16.0 5.3 2.5 2 1 0 2 2 2 1 Organic Anion Transporter Polypeptide (OATP) family Tom7 PF08038.12 RKO88996.1 - 0.14 11.8 0.8 0.48 10.1 0.8 1.9 1 0 0 1 1 1 0 TOM7 family SBP_bac_8 PF13416.6 RKO88997.1 - 5.9e-12 46.0 0.9 1.7e-11 44.4 0.1 2.1 2 1 0 2 2 2 1 Bacterial extracellular solute-binding protein SH3_9 PF14604.6 RKO88997.1 - 3.2e-06 26.9 0.1 8e-06 25.6 0.1 1.7 1 0 0 1 1 1 1 Variant SH3 domain Sds3 PF08598.11 RKO88998.1 - 2.6e-10 40.7 0.1 6.4e-10 39.4 0.0 1.7 2 0 0 2 2 2 1 Sds3-like Macoilin PF09726.9 RKO88998.1 - 0.21 10.1 10.1 0.36 9.3 10.1 1.4 1 0 0 1 1 1 0 Macoilin family Lin-8 PF03353.15 RKO88998.1 - 2.3 7.7 7.0 5.5 6.5 7.0 1.8 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Ank_5 PF13857.6 RKO88999.1 - 3.6e-09 36.7 4.3 0.026 14.9 0.1 5.7 1 1 5 6 6 6 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO88999.1 - 2.2e-07 31.4 0.3 0.001 19.6 0.0 2.8 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO88999.1 - 2.9e-06 27.7 1.2 1.6 9.4 0.1 4.4 2 2 3 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO88999.1 - 0.025 15.1 0.8 34 5.5 0.0 4.4 5 0 0 5 5 5 0 Ankyrin repeat Spem1 PF15670.5 RKO89000.1 - 0.082 12.5 0.8 6.2 6.3 0.2 2.1 2 0 0 2 2 2 0 Spermatid maturation protein 1 Retrotran_gag_2 PF14223.6 RKO89001.1 - 3.4e-10 39.7 0.0 6.4e-09 35.6 0.0 2.0 2 0 0 2 2 2 2 gag-polypeptide of LTR copia-type RraB PF06877.11 RKO89008.1 - 0.17 12.6 0.4 0.3 11.8 0.4 1.3 1 0 0 1 1 1 0 Regulator of ribonuclease activity B GSH_synth_ATP PF03917.17 RKO89009.1 - 1e-52 179.2 0.0 1.2e-52 179.0 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain FlaC_arch PF05377.11 RKO89009.1 - 0.058 13.8 0.3 0.31 11.5 0.1 1.9 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Gly_transf_sug PF04488.15 RKO89010.1 - 2.2e-07 31.4 0.0 5.2e-07 30.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase sugar-binding region containing DXD motif Glycos_transf_2 PF00535.26 RKO89010.1 - 2.8e-07 30.5 0.0 7.5e-07 29.1 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 Gb3_synth PF04572.12 RKO89010.1 - 0.0022 18.2 0.0 0.0055 16.9 0.0 1.6 1 0 0 1 1 1 1 Alpha 1,4-glycosyltransferase conserved region LINES_C PF14695.6 RKO89010.1 - 0.011 15.1 0.0 0.022 14.2 0.0 1.5 1 0 0 1 1 1 0 Lines C-terminus fn3 PF00041.21 RKO89010.1 - 0.026 14.8 0.0 0.069 13.5 0.0 1.7 1 0 0 1 1 1 0 Fibronectin type III domain Acyl-CoA_dh_2 PF08028.11 RKO89013.1 - 0.16 12.2 3.8 0.32 11.3 3.8 1.4 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, C-terminal domain EMP70 PF02990.16 RKO89014.1 - 1.5e-203 677.2 5.8 1.7e-203 677.0 5.8 1.0 1 0 0 1 1 1 1 Endomembrane protein 70 MFS_1 PF07690.16 RKO89014.1 - 3.8 6.3 34.2 0.0089 15.0 15.6 2.5 1 1 0 2 2 2 0 Major Facilitator Superfamily Evr1_Alr PF04777.13 RKO89016.1 - 1.9e-11 44.3 0.0 2.2e-11 44.1 0.0 1.1 1 0 0 1 1 1 1 Erv1 / Alr family PI3Ka PF00613.20 RKO89018.1 - 1.2e-64 217.1 0.9 1.9e-64 216.5 0.9 1.3 1 0 0 1 1 1 1 Phosphoinositide 3-kinase family, accessory domain (PIK domain) PI3K_C2 PF00792.24 RKO89018.1 - 4.8e-42 143.2 0.0 9.1e-42 142.3 0.0 1.4 1 0 0 1 1 1 1 Phosphoinositide 3-kinase C2 Jnk-SapK_ap_N PF09744.9 RKO89019.1 - 0.0018 18.5 3.1 0.0018 18.5 3.1 2.0 2 0 0 2 2 2 1 JNK_SAPK-associated protein-1 EzrA PF06160.12 RKO89019.1 - 0.026 12.7 5.8 0.19 9.9 0.3 2.5 1 1 0 2 2 2 0 Septation ring formation regulator, EzrA Trimer_CC PF08954.11 RKO89019.1 - 0.081 12.5 3.0 0.18 11.4 0.4 2.9 3 0 0 3 3 3 0 Trimerisation motif DUF641 PF04859.12 RKO89019.1 - 0.2 12.0 3.6 0.44 10.9 0.2 2.4 2 1 0 2 2 2 0 Plant protein of unknown function (DUF641) DHR10 PF18595.1 RKO89019.1 - 0.27 11.3 14.7 3.5 7.7 0.2 3.3 2 1 1 3 3 3 0 Designed helical repeat protein 10 domain TolA_bind_tri PF16331.5 RKO89019.1 - 0.4 10.8 3.4 2.6 8.2 0.0 3.0 3 0 0 3 3 3 0 TolA binding protein trimerisation Cut12 PF11500.8 RKO89019.1 - 0.46 10.4 2.7 6.2 6.8 0.7 2.3 2 1 0 2 2 2 0 Spindle pole body formation-associated protein Spc7 PF08317.11 RKO89019.1 - 0.88 8.4 7.6 0.98 8.2 0.7 2.1 1 1 1 2 2 2 0 Spc7 kinetochore protein PRKG1_interact PF15898.5 RKO89019.1 - 0.96 10.4 7.0 0.92 10.4 1.2 2.6 2 1 0 2 2 2 0 cGMP-dependent protein kinase interacting domain DUF4164 PF13747.6 RKO89019.1 - 1.8 8.9 18.8 0.11 12.8 2.9 3.4 1 1 0 2 2 2 0 Domain of unknown function (DUF4164) CENP-F_leu_zip PF10473.9 RKO89019.1 - 2.2 8.3 7.3 2 8.4 0.3 2.8 2 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GrpE PF01025.19 RKO89019.1 - 3.7 7.2 6.5 0.79 9.4 2.6 1.8 2 0 0 2 2 2 0 GrpE HIP1_clath_bdg PF16515.5 RKO89019.1 - 4.9 7.8 8.1 11 6.7 0.7 2.5 2 1 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Macoilin PF09726.9 RKO89019.1 - 5.9 5.3 8.5 21 3.5 8.5 1.8 1 1 0 1 1 1 0 Macoilin family Tropomyosin_1 PF12718.7 RKO89019.1 - 6.6 6.9 11.2 5.3 7.2 0.7 2.2 2 0 0 2 2 2 0 Tropomyosin like Ricin_B_lectin PF00652.22 RKO89021.1 - 5.1e-37 126.9 15.0 1.8e-19 70.3 3.3 2.3 2 1 0 2 2 2 2 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 RKO89021.1 - 2.8e-35 120.9 29.3 2e-10 41.3 1.6 5.4 1 1 5 6 6 6 6 Ricin-type beta-trefoil lectin domain-like CDtoxinA PF03498.14 RKO89021.1 - 2e-05 24.2 16.1 0.0013 18.4 1.0 4.4 1 1 3 4 4 4 3 Cytolethal distending toxin A/C domain MCM PF00493.23 RKO89021.1 - 0.0079 15.3 0.0 2.4 7.2 0.0 2.2 2 0 0 2 2 2 2 MCM P-loop domain Orf78 PF06024.12 RKO89021.1 - 0.36 11.2 2.3 0.92 9.8 1.4 2.2 2 0 0 2 2 2 0 Orf78 (ac78) Colipase_C PF02740.14 RKO89021.1 - 1.3 9.2 5.5 3 8.1 0.3 2.7 2 0 0 2 2 2 0 Colipase, C-terminal domain PilA4 PF18682.1 RKO89021.1 - 6.7 7.2 9.3 5.6 7.4 2.1 3.4 2 2 2 4 4 4 0 Pilin A4 Stevor PF17410.2 RKO89022.1 - 0.01 15.4 2.2 0.016 14.7 2.2 1.2 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Xpo1 PF08389.12 RKO89022.1 - 0.086 12.9 0.2 0.37 10.8 0.1 1.9 1 1 1 2 2 2 0 Exportin 1-like protein PHD PF00628.29 RKO89023.1 - 4.3e-06 26.5 5.0 7.3e-06 25.8 5.0 1.4 1 0 0 1 1 1 1 PHD-finger PHD_2 PF13831.6 RKO89023.1 - 0.23 11.0 3.3 1.8 8.2 0.1 2.5 2 0 0 2 2 2 0 PHD-finger DUF2009 PF09418.10 RKO89024.1 - 2.3e-109 366.5 0.0 2.7e-109 366.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2009) zf-B_box PF00643.24 RKO89024.1 - 2.2e-07 30.9 6.7 4e-07 30.1 6.7 1.4 1 0 0 1 1 1 1 B-box zinc finger CEBP_ZZ PF16366.5 RKO89024.1 - 0.00033 20.8 4.8 0.00059 20.0 4.8 1.3 1 0 0 1 1 1 1 Cytoplasmic polyadenylation element-binding protein ZZ domain zf-C3HC4_3 PF13920.6 RKO89024.1 - 0.0096 15.8 5.3 0.018 14.9 5.3 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-HIT PF04438.16 RKO89024.1 - 0.25 11.3 2.6 0.56 10.1 2.6 1.5 1 0 0 1 1 1 0 HIT zinc finger CUE PF02845.16 RKO89026.1 - 0.001 18.7 0.0 0.0019 17.8 0.0 1.5 1 0 0 1 1 1 1 CUE domain Mic1 PF07035.12 RKO89027.1 - 1.3e-17 63.9 0.0 4.2e-17 62.3 0.0 1.7 2 0 0 2 2 2 1 Colon cancer-associated protein Mic1-like Adaptin_N PF01602.20 RKO89028.1 - 1.5e-09 37.0 0.0 1.8e-09 36.7 0.0 1.1 1 0 0 1 1 1 1 Adaptin N terminal region ThiS PF02597.20 RKO89028.1 - 0.098 13.3 0.0 0.2 12.3 0.0 1.4 1 0 0 1 1 1 0 ThiS family Tho1_MOS11_C PF18592.1 RKO89028.1 - 0.18 11.7 0.0 0.52 10.2 0.0 1.7 2 0 0 2 2 2 0 Tho1/MOS11 C-terminal domain E1-E2_ATPase PF00122.20 RKO89029.1 - 9.1e-33 113.3 0.3 1.6e-32 112.5 0.3 1.3 1 0 0 1 1 1 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 RKO89029.1 - 0.00061 19.4 0.0 0.0013 18.4 0.0 1.5 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus COX17 PF05051.13 RKO89029.1 - 0.49 10.8 2.9 1.6 9.2 2.9 1.8 1 0 0 1 1 1 0 Cytochrome C oxidase copper chaperone (COX17) Hydrolase PF00702.26 RKO89030.1 - 5.5e-23 82.4 1.1 6.2e-11 43.0 0.1 3.5 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 RKO89030.1 - 5.9e-14 51.9 0.0 1.2e-13 50.9 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 RKO89030.1 - 1.1e-08 35.1 0.8 1.6e-08 34.6 0.3 1.5 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 RKO89030.1 - 1.1e-05 25.9 0.0 0.0049 17.3 0.0 2.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Nitro_FeMo-Co PF02579.17 RKO89030.1 - 0.18 12.2 0.5 1.9 8.9 0.1 2.3 2 0 0 2 2 2 0 Dinitrogenase iron-molybdenum cofactor Terminase_6C PF17289.2 RKO89031.1 - 0.1 12.7 0.0 0.27 11.3 0.0 1.7 2 0 0 2 2 2 0 Terminase RNaseH-like domain V-ATPase_C PF03223.15 RKO89032.1 - 1.2e-136 456.0 3.3 1.4e-136 455.8 3.3 1.0 1 0 0 1 1 1 1 V-ATPase subunit C PTPS PF01242.19 RKO89032.1 - 0.053 13.5 0.4 2.7 8.0 0.0 2.4 2 0 0 2 2 2 0 6-pyruvoyl tetrahydropterin synthase BRAP2 PF07576.12 RKO89033.1 - 6.7e-30 103.2 0.0 1e-29 102.6 0.0 1.2 1 0 0 1 1 1 1 BRCA1-associated protein 2 zf-UBP PF02148.19 RKO89033.1 - 6.9e-21 74.4 3.9 1.7e-20 73.1 3.9 1.7 1 0 0 1 1 1 1 Zn-finger in ubiquitin-hydrolases and other protein zf-RING_2 PF13639.6 RKO89033.1 - 1.7e-07 31.4 10.2 4e-07 30.2 10.2 1.7 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 RKO89033.1 - 3.7e-05 23.5 9.9 8.5e-05 22.3 9.9 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 RKO89033.1 - 0.00015 21.7 3.9 0.00015 21.7 3.9 1.8 1 1 0 1 1 1 1 RING-type zinc-finger zf-rbx1 PF12678.7 RKO89033.1 - 0.00017 21.8 8.1 0.00042 20.6 8.1 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 RKO89033.1 - 0.00065 19.5 8.1 0.0014 18.5 8.1 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) KASH_CCD PF14662.6 RKO89033.1 - 0.0011 18.8 5.1 0.0017 18.3 5.1 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH zf-ANAPC11 PF12861.7 RKO89033.1 - 0.0026 17.8 6.4 0.0057 16.7 6.4 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_11 PF17123.5 RKO89033.1 - 0.0075 16.0 8.2 0.017 14.9 8.2 1.6 1 0 0 1 1 1 1 RING-like zinc finger ZapB PF06005.12 RKO89033.1 - 0.0089 16.5 9.4 0.013 15.9 8.5 1.7 1 1 0 1 1 1 1 Cell division protein ZapB zf-C3HC4_3 PF13920.6 RKO89033.1 - 0.017 15.0 6.7 0.017 15.0 6.7 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Spc7 PF08317.11 RKO89033.1 - 0.017 14.0 11.5 0.024 13.5 11.5 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF2968 PF11180.8 RKO89033.1 - 0.039 13.6 13.7 0.066 12.8 11.5 2.3 3 1 0 3 3 3 0 Protein of unknown function (DUF2968) ArfGap PF01412.18 RKO89033.1 - 0.092 12.8 0.9 0.2 11.8 0.9 1.5 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf Prefoldin_2 PF01920.20 RKO89033.1 - 0.1 12.6 5.2 4.1 7.4 1.9 2.4 1 1 1 2 2 2 0 Prefoldin subunit TBCA PF02970.16 RKO89033.1 - 0.1 12.9 3.0 0.26 11.7 3.0 1.7 1 0 0 1 1 1 0 Tubulin binding cofactor A zf-UBP_var PF17807.1 RKO89033.1 - 0.12 12.2 0.5 0.24 11.2 0.5 1.4 1 0 0 1 1 1 0 Variant UBP zinc finger zf-RING_4 PF14570.6 RKO89033.1 - 0.25 11.2 5.4 0.6 10.0 5.4 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain UPF0242 PF06785.11 RKO89033.1 - 0.31 11.1 6.3 0.49 10.5 6.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus ATG16 PF08614.11 RKO89033.1 - 1 9.5 16.4 3.5 7.8 16.4 1.7 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) TPR_MLP1_2 PF07926.12 RKO89033.1 - 2.6 8.1 12.2 1.3 9.1 3.1 2.3 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Atg14 PF10186.9 RKO89033.1 - 3.9 6.5 5.4 7.1 5.6 5.4 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 zf-C3HC4_4 PF15227.6 RKO89033.1 - 4.9 7.4 7.8 9.3 6.5 5.6 2.5 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING TMF_TATA_bd PF12325.8 RKO89033.1 - 6.8 6.9 10.9 23 5.2 10.8 1.9 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding DUF4407 PF14362.6 RKO89033.1 - 7.4 5.8 9.9 17 4.6 9.9 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) RNase_H PF00075.24 RKO89034.1 - 0.019 15.1 0.0 0.026 14.7 0.0 1.2 1 0 0 1 1 1 0 RNase H PRP8_domainIV PF12134.8 RKO89037.1 - 3.3e-130 432.6 0.6 5.8e-130 431.8 0.6 1.4 1 0 0 1 1 1 1 PRP8 domain IV core U6-snRNA_bdg PF10596.9 RKO89037.1 - 7.4e-84 279.5 3.9 6.6e-60 201.7 0.3 3.0 3 0 0 3 3 3 2 U6-snRNA interacting domain of PrP8 U5_2-snRNA_bdg PF10597.9 RKO89037.1 - 9.6e-68 226.4 1.9 3.7e-65 218.0 1.9 2.5 1 1 0 1 1 1 1 U5-snRNA binding site 2 of PrP8 PROCT PF08084.11 RKO89037.1 - 5.2e-35 120.0 0.0 2e-34 118.2 0.0 1.9 1 0 0 1 1 1 1 PROCT (NUC072) domain JAB PF01398.21 RKO89037.1 - 3.6e-08 33.4 0.0 7.8e-08 32.3 0.0 1.6 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease UPF1_Zn_bind PF09416.10 RKO89038.1 - 3.2e-19 69.4 0.3 5.7e-19 68.6 0.3 1.4 1 0 0 1 1 1 1 RNA helicase (UPF2 interacting domain) Lactamase_B PF00753.27 RKO89040.1 - 1.7e-11 44.5 2.2 1.7e-11 44.5 2.2 2.2 2 1 1 3 3 3 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 RKO89040.1 - 0.037 13.5 0.6 0.06 12.8 0.6 1.7 1 1 0 1 1 1 0 Beta-lactamase superfamily domain FmdA_AmdA PF03069.15 RKO89041.1 - 4.7e-46 157.3 0.0 5.3e-46 157.2 0.0 1.0 1 0 0 1 1 1 1 Acetamidase/Formamidase family LIDHydrolase PF10230.9 RKO89042.1 - 7.2e-31 107.7 0.1 3.4e-19 69.5 0.0 2.1 1 1 1 2 2 2 2 Lipid-droplet associated hydrolase Hydrolase_4 PF12146.8 RKO89042.1 - 2e-05 24.0 0.0 2.2e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO89042.1 - 0.00015 22.5 0.3 0.0002 22.0 0.3 1.3 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_3 PF07859.13 RKO89042.1 - 0.0009 19.1 0.0 0.001 19.0 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.7 RKO89042.1 - 0.0019 18.0 0.0 0.0033 17.2 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family DUF1057 PF06342.12 RKO89042.1 - 0.0038 16.3 0.0 0.0047 16.0 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1057) Abhydrolase_2 PF02230.16 RKO89042.1 - 0.0095 15.8 0.0 0.011 15.6 0.0 1.1 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase PGAP1 PF07819.13 RKO89042.1 - 0.01 15.6 0.0 0.018 14.8 0.0 1.5 1 1 0 1 1 1 1 PGAP1-like protein Thioesterase PF00975.20 RKO89042.1 - 0.016 15.3 0.0 0.025 14.7 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain Lipase_3 PF01764.25 RKO89042.1 - 0.02 14.8 0.0 0.031 14.1 0.0 1.3 1 0 0 1 1 1 0 Lipase (class 3) Abhydrolase_1 PF00561.20 RKO89042.1 - 0.022 14.4 0.0 0.64 9.6 0.0 2.1 1 1 1 2 2 2 0 alpha/beta hydrolase fold Beta-lactamase PF00144.24 RKO89045.1 - 3e-27 95.7 0.0 4.1e-27 95.3 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase ORMDL PF04061.14 RKO89046.1 - 4e-53 178.9 7.7 4.6e-53 178.7 7.7 1.0 1 0 0 1 1 1 1 ORMDL family Ribosomal_L16 PF00252.18 RKO89047.1 - 1.5e-42 144.7 0.1 1.9e-42 144.4 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e U83 PF17465.2 RKO89047.1 - 0.07 13.3 0.0 0.13 12.4 0.0 1.3 1 0 0 1 1 1 0 Chemokine-like protein, HHV-6 U83 gene product zf-C2H2 PF00096.26 RKO89048.1 - 1.3e-06 28.5 8.4 0.0069 16.8 0.4 2.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_8 PF15909.5 RKO89048.1 - 0.00076 19.7 0.2 0.0013 18.9 0.2 1.3 1 0 0 1 1 1 1 C2H2-type zinc ribbon zf-H2C2_2 PF13465.6 RKO89048.1 - 0.0032 17.8 0.6 0.0032 17.8 0.6 2.4 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 RKO89048.1 - 0.04 14.8 8.3 1.1 10.3 0.4 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger zf-met PF12874.7 RKO89048.1 - 0.091 13.2 0.7 2.5 8.6 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type TraQ PF09679.10 RKO89048.1 - 0.11 12.4 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin chaperone (TraQ) Kinesin PF00225.23 RKO89052.1 - 2.5e-44 151.6 0.1 2.9e-44 151.3 0.1 1.0 1 0 0 1 1 1 1 Kinesin motor domain Ribosomal_L29 PF00831.23 RKO89054.1 - 4.6e-20 71.3 1.5 4.6e-20 71.3 1.5 2.0 2 1 0 2 2 2 1 Ribosomal L29 protein Snapin_Pallidin PF14712.6 RKO89054.1 - 0.007 16.8 2.7 0.007 16.8 2.7 1.9 2 0 0 2 2 2 1 Snapin/Pallidin TolA_bind_tri PF16331.5 RKO89054.1 - 0.021 14.9 2.2 0.027 14.5 0.5 2.0 2 0 0 2 2 2 0 TolA binding protein trimerisation FlxA PF14282.6 RKO89054.1 - 0.028 14.4 2.2 0.052 13.5 2.2 1.4 1 0 0 1 1 1 0 FlxA-like protein FliT PF05400.13 RKO89054.1 - 0.26 12.1 3.1 0.88 10.4 0.3 2.2 2 1 0 2 2 2 0 Flagellar protein FliT DUF948 PF06103.11 RKO89054.1 - 0.49 10.7 4.7 0.14 12.5 1.5 1.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Prefoldin PF02996.17 RKO89054.1 - 0.65 9.9 6.1 6.3 6.7 1.4 2.8 2 1 1 3 3 3 0 Prefoldin subunit Spt20 PF12090.8 RKO89055.1 - 4.2e-19 69.1 0.0 6.3e-19 68.5 0.0 1.2 1 0 0 1 1 1 1 Spt20 family CDC27 PF09507.10 RKO89055.1 - 0.22 10.9 1.2 0.34 10.2 1.2 1.3 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Spo12 PF05032.12 RKO89056.1 - 2.8e-10 39.9 1.1 4.3e-10 39.3 1.1 1.2 1 0 0 1 1 1 1 Spo12 family PIP5K PF01504.18 RKO89058.1 - 7e-43 146.8 0.0 6.6e-41 140.3 0.0 2.6 2 1 0 2 2 2 2 Phosphatidylinositol-4-phosphate 5-Kinase Methyltransf_5 PF01795.19 RKO89058.1 - 0.17 11.4 0.0 0.26 10.7 0.0 1.2 1 0 0 1 1 1 0 MraW methylase family ORC3_N PF07034.11 RKO89059.1 - 1.5e-32 113.1 0.2 3.2e-32 111.9 0.2 1.6 1 1 0 1 1 1 1 Origin recognition complex (ORC) subunit 3 N-terminus ORC_WH_C PF18137.1 RKO89059.1 - 2.4e-26 92.5 0.0 2.5e-14 53.6 0.0 2.3 2 0 0 2 2 2 2 Origin recognition complex winged helix C-terminal PQQ_2 PF13360.6 RKO89061.1 - 2.2e-11 43.8 0.0 0.0029 17.2 0.0 3.2 3 0 0 3 3 3 3 PQQ-like domain PQQ PF01011.21 RKO89061.1 - 2.4e-09 36.6 1.9 0.3 11.1 0.1 5.6 5 0 0 5 5 5 3 PQQ enzyme repeat PQQ_3 PF13570.6 RKO89061.1 - 2.9e-06 27.6 10.6 5.6 7.6 0.2 7.2 7 0 0 7 7 7 4 PQQ-like domain Peptidase_C54 PF03416.19 RKO89062.1 - 7e-101 337.3 0.0 8.4e-101 337.0 0.0 1.0 1 0 0 1 1 1 1 Peptidase family C54 Fib_alpha PF08702.10 RKO89063.1 - 0.035 14.3 5.7 2.9 8.1 0.1 3.1 3 1 0 3 3 3 0 Fibrinogen alpha/beta chain family Hamartin PF04388.12 RKO89063.1 - 0.036 12.8 0.1 0.036 12.8 0.1 3.2 3 1 0 3 3 3 0 Hamartin protein NPV_P10 PF05531.12 RKO89063.1 - 0.094 13.2 1.7 31 5.1 0.0 3.5 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein Laminin_II PF06009.12 RKO89063.1 - 0.27 11.3 4.9 7.2 6.6 0.1 2.5 1 1 1 2 2 2 0 Laminin Domain II pRN1_helical PF13010.6 RKO89063.1 - 1.2 9.2 4.9 0.22 11.5 1.0 1.8 2 0 0 2 2 2 0 Primase helical domain E2R135 PF11570.8 RKO89063.1 - 2.7 8.3 7.5 0.29 11.4 1.1 2.4 2 1 1 3 3 3 0 Coiled-coil receptor-binding R-domain of colicin E2 Spc7 PF08317.11 RKO89063.1 - 5.4 5.8 27.6 0.051 12.5 7.4 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein Tropomyosin_1 PF12718.7 RKO89063.1 - 6.7 6.9 28.8 0.046 13.9 7.8 2.5 1 1 1 2 2 2 0 Tropomyosin like DotA PF11388.8 RKO89065.1 - 0.046 13.9 0.0 0.077 13.2 0.0 1.4 1 0 0 1 1 1 0 Phagosome trafficking protein DotA Phage_term_smal PF05944.12 RKO89066.1 - 0.15 12.1 0.2 14 5.7 0.0 2.5 1 1 1 2 2 2 0 Phage small terminase subunit PI3_PI4_kinase PF00454.27 RKO89067.1 - 1.1e-22 81.0 0.4 5.4e-16 59.2 0.0 2.5 3 0 0 3 3 3 2 Phosphatidylinositol 3- and 4-kinase FATC PF02260.20 RKO89067.1 - 9e-11 41.4 0.0 1.9e-10 40.4 0.0 1.5 1 0 0 1 1 1 1 FATC domain Helicase_C PF00271.31 RKO89068.1 - 2.9e-16 59.8 0.0 1.3e-13 51.2 0.0 2.4 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DEAD PF00270.29 RKO89068.1 - 4.4e-16 59.2 0.0 1e-15 58.0 0.0 1.6 1 1 0 1 1 1 1 DEAD/DEAH box helicase RecQ_Zn_bind PF16124.5 RKO89068.1 - 2.6e-11 44.1 0.1 5.3e-11 43.1 0.1 1.6 1 0 0 1 1 1 1 RecQ zinc-binding ResIII PF04851.15 RKO89068.1 - 0.0038 17.2 0.0 0.0093 16.0 0.0 1.6 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit RQC PF09382.10 RKO89068.1 - 0.012 15.4 0.1 3.1 7.6 0.0 2.4 2 0 0 2 2 2 0 RQC domain CitX PF03802.14 RKO89068.1 - 0.055 13.2 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase LIDHydrolase PF10230.9 RKO89069.1 - 2.9e-55 187.7 0.0 3.4e-55 187.5 0.0 1.0 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase Hydrolase_4 PF12146.8 RKO89069.1 - 2.2e-06 27.1 0.2 2.6e-06 26.9 0.2 1.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO89069.1 - 0.0019 18.8 0.9 0.0024 18.5 0.9 1.3 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_3 PF07859.13 RKO89069.1 - 0.0048 16.8 0.1 0.0095 15.8 0.0 1.5 2 0 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_1 PF00561.20 RKO89069.1 - 0.0098 15.6 0.1 1 8.9 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Lipase_3 PF01764.25 RKO89069.1 - 0.017 15.0 0.0 0.033 14.1 0.0 1.5 1 0 0 1 1 1 0 Lipase (class 3) Thioesterase PF00975.20 RKO89069.1 - 0.028 14.5 0.0 0.044 13.9 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain Abhydrolase_5 PF12695.7 RKO89069.1 - 0.049 13.4 0.0 2.3 8.0 0.0 2.2 2 0 0 2 2 2 0 Alpha/beta hydrolase family DUF1057 PF06342.12 RKO89069.1 - 0.059 12.4 0.0 0.076 12.0 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) MARVEL PF01284.23 RKO89071.1 - 0.002 18.2 12.8 0.0037 17.3 12.8 1.4 1 0 0 1 1 1 1 Membrane-associating domain MARVEL PF01284.23 RKO89072.1 - 2.6 8.0 12.9 5.2 7.1 12.9 1.6 1 1 0 1 1 1 0 Membrane-associating domain 2OG-FeII_Oxy_3 PF13640.6 RKO89073.1 - 1.1e-07 32.7 0.0 1.9e-07 31.8 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Tricorn_PDZ PF14685.6 RKO89073.1 - 0.14 12.2 0.0 0.26 11.3 0.0 1.4 1 0 0 1 1 1 0 Tricorn protease PDZ domain 4HBT_3 PF13622.6 RKO89074.1 - 4e-19 69.8 0.2 6.4e-19 69.2 0.2 1.2 1 0 0 1 1 1 1 Thioesterase-like superfamily WD40 PF00400.32 RKO89075.1 - 2.4e-06 28.2 0.2 1.3 10.1 0.0 3.7 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO89075.1 - 0.12 12.7 0.0 1.3 9.4 0.0 2.4 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 RKO89076.1 - 7.3e-18 64.6 8.7 1.7e-05 25.5 0.0 6.1 6 0 0 6 6 6 3 WD domain, G-beta repeat Nucleoporin_N PF08801.11 RKO89076.1 - 0.00012 21.0 0.0 0.2 10.3 0.0 2.3 2 0 0 2 2 2 2 Nup133 N terminal like ANAPC4_WD40 PF12894.7 RKO89076.1 - 0.00026 21.2 0.1 0.0032 17.7 0.0 2.8 4 0 0 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO89076.1 - 0.00054 18.7 0.0 0.09 11.4 0.0 2.3 2 0 0 2 2 2 2 Nucleoporin Nup120/160 HMG_box PF00505.19 RKO89078.1 - 6e-16 58.6 0.3 7.3e-16 58.3 0.3 1.1 1 0 0 1 1 1 1 HMG (high mobility group) box Syntaphilin PF15290.6 RKO89080.1 - 0.0037 17.0 1.6 0.0037 17.0 1.6 2.0 2 0 0 2 2 2 1 Golgi-localised syntaxin-1-binding clamp Rab_bind PF16704.5 RKO89080.1 - 0.038 14.0 0.1 0.08 13.0 0.1 1.5 1 0 0 1 1 1 0 Rab binding domain PV-1 PF06637.11 RKO89080.1 - 0.56 9.0 4.0 1.1 8.0 4.0 1.4 1 0 0 1 1 1 0 PV-1 protein (PLVAP) DHHC PF01529.20 RKO89081.1 - 9.3e-24 84.1 2.5 9.3e-24 84.1 2.5 1.9 2 0 0 2 2 2 1 DHHC palmitoyltransferase DUF3098 PF11297.8 RKO89081.1 - 0.65 9.6 3.2 0.35 10.5 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3098) CRAL_TRIO_N PF03765.15 RKO89083.1 - 0.12 12.6 0.0 0.46 10.7 0.0 1.9 2 0 0 2 2 2 0 CRAL/TRIO, N-terminal domain FANCAA PF15146.6 RKO89083.1 - 0.13 11.3 0.0 0.19 10.8 0.0 1.1 1 0 0 1 1 1 0 Fanconi anemia-associated UQ_con PF00179.26 RKO89085.1 - 2.6e-49 166.5 0.0 2.9e-49 166.3 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 RKO89085.1 - 0.17 11.6 0.0 0.3 10.8 0.0 1.6 1 1 0 1 1 1 0 Prokaryotic E2 family B Glyco_hydro_28 PF00295.17 RKO89086.1 - 4.4e-19 68.7 6.9 4.1e-12 45.8 0.4 2.2 1 1 1 2 2 2 2 Glycosyl hydrolases family 28 SNARE PF05739.19 RKO89089.1 - 4e-16 58.7 0.1 4e-16 58.7 0.1 2.1 2 0 0 2 2 2 1 SNARE domain Syntaxin_2 PF14523.6 RKO89089.1 - 0.012 15.9 0.9 0.012 15.9 0.9 2.4 2 1 0 2 2 2 0 Syntaxin-like protein GCP_C_terminal PF04130.13 RKO89089.1 - 0.023 14.2 0.4 0.035 13.6 0.3 1.4 1 1 0 1 1 1 0 Gamma tubulin complex component C-terminal Orf78 PF06024.12 RKO89089.1 - 0.046 14.0 0.2 0.12 12.7 0.1 1.8 1 1 0 1 1 1 0 Orf78 (ac78) PEP-utilisers_N PF05524.13 RKO89089.1 - 0.078 13.2 1.7 0.24 11.6 0.4 2.2 2 1 0 2 2 2 0 PEP-utilising enzyme, N-terminal MCPsignal PF00015.21 RKO89089.1 - 0.082 12.7 0.4 0.082 12.7 0.4 2.3 3 0 0 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Syntaxin PF00804.25 RKO89089.1 - 0.17 11.5 9.1 1.7 8.3 9.1 2.2 1 1 0 1 1 1 0 Syntaxin DUF5446 PF17522.2 RKO89089.1 - 4 7.7 6.9 12 6.2 2.7 2.8 2 1 0 2 2 2 0 Family of unknown function (DUF5446) NAC PF01849.18 RKO89090.1 - 4e-23 81.1 0.4 1.7e-22 79.1 0.1 2.0 2 0 0 2 2 2 1 NAC domain KH_2 PF07650.17 RKO89090.1 - 0.018 14.9 0.2 0.045 13.6 0.2 1.7 1 0 0 1 1 1 0 KH domain Prok_Ub PF14454.6 RKO89090.1 - 0.037 13.7 0.1 0.071 12.8 0.1 1.4 1 0 0 1 1 1 0 Prokaryotic Ubiquitin UBA_4 PF14555.6 RKO89090.1 - 0.066 13.0 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 UBA-like domain DUF1247 PF06851.11 RKO89090.1 - 0.13 12.2 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1247) Kelch_6 PF13964.6 RKO89091.1 - 0.00044 20.4 7.4 0.018 15.3 0.2 3.1 3 1 1 4 4 4 2 Kelch motif Kelch_5 PF13854.6 RKO89091.1 - 0.0011 18.8 1.7 0.8 9.8 0.0 2.6 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 RKO89091.1 - 0.19 12.0 0.2 0.19 12.0 0.2 3.0 3 0 0 3 3 3 0 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO89091.1 - 0.84 9.3 4.3 2 8.1 0.7 2.8 2 1 0 2 2 2 0 Kelch motif DNA_ligase_ZBD PF03119.16 RKO89094.1 - 9.8 6.3 6.5 0.61 10.2 0.4 2.3 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain DUF637 PF04830.13 RKO89097.1 - 0.024 14.5 0.1 1.1 9.1 0.0 2.1 2 0 0 2 2 2 0 Possible hemagglutinin (DUF637) CIA30 PF08547.12 RKO89099.1 - 7.3e-35 120.4 0.0 8.9e-35 120.1 0.0 1.1 1 0 0 1 1 1 1 Complex I intermediate-associated protein 30 (CIA30) PrpF PF04303.13 RKO89101.1 - 2.3e-114 382.2 0.1 2.7e-114 382.0 0.1 1.0 1 0 0 1 1 1 1 PrpF protein AAA PF00004.29 RKO89103.1 - 1e-08 35.7 0.0 1.5e-08 35.2 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 RKO89103.1 - 3.2e-07 30.0 0.3 6.4e-07 29.1 0.3 1.5 1 0 0 1 1 1 1 AAA+ lid domain AAA_22 PF13401.6 RKO89103.1 - 3.3e-06 27.4 0.0 6.1e-06 26.6 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 RKO89103.1 - 1.8e-05 25.2 0.0 4.4e-05 23.9 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 RKO89103.1 - 0.00046 20.2 0.1 0.00083 19.4 0.1 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Bac_DnaA PF00308.18 RKO89103.1 - 0.00079 19.3 0.0 0.0012 18.7 0.0 1.1 1 0 0 1 1 1 1 Bacterial dnaA protein Rad17 PF03215.15 RKO89103.1 - 0.00093 19.2 0.0 0.0012 18.8 0.0 1.2 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_33 PF13671.6 RKO89103.1 - 0.0036 17.5 0.0 0.0056 16.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 RKO89103.1 - 0.01 16.4 0.0 0.016 15.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_6 PF12774.7 RKO89103.1 - 0.013 14.5 0.0 0.02 13.9 0.0 1.2 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region IstB_IS21 PF01695.17 RKO89103.1 - 0.017 14.8 0.0 0.023 14.4 0.0 1.2 1 0 0 1 1 1 0 IstB-like ATP binding protein T2SSE PF00437.20 RKO89103.1 - 0.022 13.8 0.0 0.031 13.4 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_11 PF13086.6 RKO89103.1 - 0.024 14.5 0.0 0.028 14.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 RKO89103.1 - 0.024 14.2 0.0 0.036 13.6 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_25 PF13481.6 RKO89103.1 - 0.025 14.2 0.0 0.042 13.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain TIP49 PF06068.13 RKO89103.1 - 0.029 13.6 0.0 0.042 13.1 0.0 1.1 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_30 PF13604.6 RKO89103.1 - 0.033 13.9 0.0 0.13 12.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain DUF853 PF05872.12 RKO89103.1 - 0.041 12.5 0.0 0.052 12.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) AAA_19 PF13245.6 RKO89103.1 - 0.077 13.3 0.0 0.24 11.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 RKO89103.1 - 0.081 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase RNA_helicase PF00910.22 RKO89103.1 - 0.1 13.0 0.0 0.15 12.4 0.0 1.3 1 0 0 1 1 1 0 RNA helicase Zeta_toxin PF06414.12 RKO89103.1 - 0.13 11.6 0.0 0.19 11.0 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin AAA_28 PF13521.6 RKO89103.1 - 0.13 12.5 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 RKO89103.1 - 0.19 11.4 0.0 0.31 10.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain ResIII PF04851.15 RKO89103.1 - 0.22 11.5 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit CAP_N PF01213.19 RKO89104.1 - 0.0013 18.3 4.6 0.0026 17.3 4.6 1.4 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) N terminal TMF_TATA_bd PF12325.8 RKO89104.1 - 0.073 13.3 0.1 0.073 13.3 0.1 1.8 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding PRIMA1 PF16101.5 RKO89104.1 - 0.75 9.8 10.3 1.5 8.8 10.3 1.5 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Mito_fiss_reg PF05308.11 RKO89104.1 - 0.81 9.7 16.9 0.16 12.0 11.9 2.2 2 1 0 2 2 2 0 Mitochondrial fission regulator PepSY_TM PF03929.16 RKO89104.1 - 1.4 8.5 4.6 1.4 8.5 2.9 1.8 1 1 0 1 1 1 0 PepSY-associated TM region TFIID_NTD2 PF04494.15 RKO89105.1 - 2.9e-44 150.4 2.1 3.2e-44 150.3 2.1 1.0 1 0 0 1 1 1 1 WD40 associated region in TFIID subunit, NTD2 domain Homeodomain PF00046.29 RKO89106.1 - 1.9e-14 53.2 0.9 3.2e-14 52.5 0.9 1.4 1 0 0 1 1 1 1 Homeodomain Homeobox_KN PF05920.11 RKO89106.1 - 0.12 12.3 0.3 0.27 11.2 0.3 1.6 1 0 0 1 1 1 0 Homeobox KN domain YdaS_antitoxin PF15943.5 RKO89106.1 - 0.14 12.0 0.0 0.28 11.1 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT TRM PF02005.16 RKO89108.1 - 1.7e-130 435.6 0.0 2.2e-130 435.2 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Met_10 PF02475.16 RKO89108.1 - 2.4e-07 30.7 0.0 3.9e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_25 PF13649.6 RKO89108.1 - 0.093 13.4 0.0 0.93 10.2 0.0 2.3 2 0 0 2 2 2 0 Methyltransferase domain Cons_hypoth95 PF03602.15 RKO89108.1 - 0.13 11.9 0.0 0.23 11.1 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_24 PF13578.6 RKO89108.1 - 0.15 13.1 0.0 0.46 11.5 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain Nucleoporin_N PF08801.11 RKO89109.1 - 0.00054 18.8 0.0 0.00084 18.2 0.0 1.3 1 0 0 1 1 1 1 Nup133 N terminal like Bromodomain PF00439.25 RKO89110.1 - 0.051 13.7 0.0 0.065 13.3 0.0 1.3 1 0 0 1 1 1 0 Bromodomain AKNA PF12443.8 RKO89111.1 - 0.0038 17.8 0.5 0.031 14.9 0.0 2.4 1 1 2 3 3 3 1 AT-hook-containing transcription factor tRNA-synt_His PF13393.6 RKO89114.1 - 8.2e-38 130.4 0.1 8.1e-32 110.7 0.0 2.1 2 0 0 2 2 2 2 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 RKO89114.1 - 1.2e-15 57.4 0.0 2.6e-15 56.3 0.0 1.6 1 0 0 1 1 1 1 Anticodon binding domain HGTP_anticodon2 PF12745.7 RKO89114.1 - 4e-05 23.3 0.0 5.5e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Anticodon binding domain of tRNAs tRNA-synt_2 PF00152.20 RKO89114.1 - 0.0007 18.8 0.0 0.003 16.7 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class II (D, K and N) CCDC84 PF14968.6 RKO89115.1 - 3.3e-20 73.0 8.0 2.6e-15 56.9 1.6 2.1 1 1 1 2 2 2 2 Coiled coil protein 84 zf-DBF PF07535.12 RKO89115.1 - 0.012 15.7 1.2 0.012 15.7 1.2 2.1 2 1 0 2 2 2 0 DBF zinc finger Glyco_hydro_15 PF00723.21 RKO89116.1 - 8.9e-39 133.5 0.0 1.1e-38 133.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 15 Trefoil PF00088.18 RKO89116.1 - 5.1e-11 42.3 6.3 8.7e-11 41.5 6.3 1.4 1 0 0 1 1 1 1 Trefoil (P-type) domain Ras PF00071.22 RKO89120.1 - 9.6e-49 165.1 0.0 1.1e-48 164.9 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO89120.1 - 1.5e-29 102.7 0.0 3.2e-29 101.6 0.0 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO89120.1 - 1.9e-10 40.4 0.0 2.3e-10 40.2 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family RNA_helicase PF00910.22 RKO89120.1 - 0.00023 21.5 0.1 0.0014 19.0 0.1 2.0 1 1 0 1 1 1 1 RNA helicase Gtr1_RagA PF04670.12 RKO89120.1 - 0.0014 18.1 0.0 0.0017 17.7 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 RKO89120.1 - 0.0027 17.8 0.0 0.0043 17.1 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase G-alpha PF00503.20 RKO89120.1 - 0.0073 15.5 1.4 1.1 8.3 0.1 2.3 2 1 0 2 2 2 2 G-protein alpha subunit AAA_7 PF12775.7 RKO89120.1 - 0.018 14.6 0.1 0.027 14.0 0.1 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region Pox_A32 PF04665.12 RKO89120.1 - 0.019 14.5 0.1 0.034 13.6 0.1 1.3 1 0 0 1 1 1 0 Poxvirus A32 protein GTP_EFTU PF00009.27 RKO89120.1 - 0.031 13.8 0.4 0.18 11.3 0.0 2.0 1 1 1 2 2 2 0 Elongation factor Tu GTP binding domain ArgoMid PF16487.5 RKO89120.1 - 0.037 14.3 0.1 0.071 13.4 0.1 1.5 1 1 0 1 1 1 0 Mid domain of argonaute RsgA_GTPase PF03193.16 RKO89120.1 - 0.037 13.9 0.2 9.5 6.1 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase AAA_24 PF13479.6 RKO89120.1 - 0.062 13.0 0.1 0.095 12.4 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 RKO89120.1 - 0.085 13.2 0.0 0.12 12.8 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain TsaE PF02367.17 RKO89120.1 - 0.11 12.5 0.1 0.25 11.4 0.2 1.6 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 RKO89120.1 - 0.13 12.4 0.2 0.21 11.7 0.2 1.3 1 0 0 1 1 1 0 AAA domain Septin PF00735.18 RKO89120.1 - 0.19 11.0 0.4 0.28 10.4 0.1 1.4 2 0 0 2 2 2 0 Septin tRNA_bind PF01588.20 RKO89121.1 - 0.004 17.2 0.0 0.0089 16.1 0.0 1.6 1 0 0 1 1 1 1 Putative tRNA binding domain ubiquitin PF00240.23 RKO89122.1 - 1.1e-82 271.8 11.6 3.1e-34 116.6 0.5 3.0 3 0 0 3 3 3 3 Ubiquitin family Rad60-SLD PF11976.8 RKO89122.1 - 4.4e-37 125.8 9.7 6.9e-16 57.8 0.6 3.0 3 0 0 3 3 3 3 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 RKO89122.1 - 4.8e-15 55.8 4.1 0.00011 22.6 0.1 4.1 3 2 0 3 3 3 3 Ubiquitin-like domain TBK1_ULD PF18396.1 RKO89122.1 - 3.3e-08 33.3 0.2 0.011 15.6 0.0 2.8 2 1 1 3 3 3 2 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_5 PF18037.1 RKO89122.1 - 6.9e-08 32.8 0.7 0.016 15.5 0.1 2.4 1 1 1 2 2 2 2 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 RKO89122.1 - 2.9e-07 30.6 1.8 0.045 13.9 0.1 3.4 3 2 0 3 3 3 2 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 RKO89122.1 - 1.1e-06 29.1 0.3 0.042 14.4 0.1 2.4 1 1 1 2 2 2 2 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 RKO89122.1 - 1.4e-05 24.9 0.2 0.19 11.6 0.0 2.6 1 1 2 3 3 3 2 Silencing defective 2 N-terminal ubiquitin domain Ubiquitin_4 PF18036.1 RKO89122.1 - 2.2e-05 24.4 12.6 5.6 7.1 0.2 5.0 5 0 0 5 5 5 2 Ubiquitin-like domain DUF3861 PF12977.7 RKO89122.1 - 7.2e-05 22.9 0.7 3 8.1 0.0 3.2 2 1 1 3 3 3 2 Domain of Unknown Function with PDB structure (DUF3861) ACT_5 PF13710.6 RKO89122.1 - 0.00021 21.1 1.6 7.5 6.5 0.0 3.3 3 0 0 3 3 3 0 ACT domain Big_7 PF17957.1 RKO89122.1 - 0.00063 20.4 0.2 22 5.9 0.0 3.1 3 0 0 3 3 3 0 Bacterial Ig domain ACT_4 PF13291.6 RKO89122.1 - 0.001 19.6 0.2 27 5.4 0.0 3.3 3 0 0 3 3 3 0 ACT domain PDGLE PF13190.6 RKO89122.1 - 0.0067 16.3 2.0 7.3 6.6 0.1 3.5 1 1 1 3 3 3 0 PDGLE domain ProRS-C_2 PF09181.10 RKO89122.1 - 0.012 15.7 3.0 29 4.9 0.1 3.2 3 0 0 3 3 3 0 Prolyl-tRNA synthetase, C-terminal UDP-g_GGTase PF06427.11 RKO89122.1 - 0.013 15.6 2.5 1.7 8.8 0.1 3.0 3 0 0 3 3 3 0 UDP-glucose:Glycoprotein Glucosyltransferase DUF2870 PF11069.8 RKO89122.1 - 0.021 15.2 0.0 16 6.0 0.0 2.9 2 2 0 2 2 2 0 Protein of unknown function (DUF2870) Methyltrans_RNA PF04452.14 RKO89122.1 - 0.021 14.1 0.7 0.34 10.2 0.0 2.3 3 0 0 3 3 3 0 RNA methyltransferase RBD PF02196.15 RKO89122.1 - 0.027 14.5 0.0 49 4.1 0.0 3.2 3 0 0 3 3 3 0 Raf-like Ras-binding domain DUF969 PF06149.12 RKO89122.1 - 0.054 12.9 0.0 9.6 5.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF969) Tash_PEST PF07708.11 RKO89122.1 - 0.068 13.4 18.4 3.6 7.9 1.5 3.4 3 0 0 3 3 3 0 Tash protein PEST motif DUF493 PF04359.14 RKO89122.1 - 0.084 13.5 0.1 1.3e+02 3.3 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF493) NEAT PF05031.12 RKO89122.1 - 0.1 13.2 1.3 3.7 8.2 1.3 2.5 1 1 0 1 1 1 0 Iron Transport-associated domain YcgR_2 PF12945.7 RKO89122.1 - 0.18 12.0 3.0 63 3.8 0.0 3.2 3 0 0 3 3 3 0 Flagellar protein YcgR FlgD_ig PF13860.6 RKO89122.1 - 0.19 11.6 5.2 30 4.6 0.1 3.3 3 0 0 3 3 3 0 FlgD Ig-like domain Plexin_cytopl PF08337.12 RKO89122.1 - 0.23 10.1 8.8 7.9 5.0 0.3 3.6 2 1 2 4 4 4 0 Plexin cytoplasmic RasGAP domain DUF218 PF02698.17 RKO89122.1 - 0.23 11.5 3.9 35 4.4 0.1 3.2 1 1 1 3 3 3 0 DUF218 domain Phage_sheath_1N PF17481.2 RKO89122.1 - 0.33 11.5 3.8 27 5.3 0.9 3.0 1 1 1 2 2 2 0 Phage tail sheath protein beta-sandwich domain PI3K_p85B PF02192.16 RKO89122.1 - 0.37 10.6 5.3 46 3.9 0.1 3.2 3 0 0 3 3 3 0 PI3-kinase family, p85-binding domain HSP90 PF00183.18 RKO89123.1 - 4.8e-143 477.8 5.1 4.8e-143 477.8 5.1 1.6 2 0 0 2 2 2 1 Hsp90 protein HATPase_c PF02518.26 RKO89123.1 - 2.7e-13 50.4 0.3 4.5e-13 49.7 0.3 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 RKO89123.1 - 7.4e-12 45.3 0.5 1.9e-11 44.0 0.5 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPSF73-100_C PF11718.8 RKO89123.1 - 0.045 13.3 0.1 0.11 12.0 0.1 1.6 1 0 0 1 1 1 0 Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term GSH-S_ATP PF02955.16 RKO89123.1 - 0.1 12.0 0.0 0.21 11.0 0.0 1.5 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain DnaJ PF00226.31 RKO89128.1 - 2.3e-19 69.3 0.7 6.2e-19 67.9 0.7 1.8 1 0 0 1 1 1 1 DnaJ domain RAC_head PF16717.5 RKO89128.1 - 1.3e-10 42.2 5.2 1.3e-10 42.2 5.2 3.8 3 2 1 4 4 4 1 Ribosome-associated complex head domain Myb_DNA-binding PF00249.31 RKO89128.1 - 0.0046 17.1 2.0 0.0078 16.4 0.0 2.3 2 0 0 2 2 2 1 Myb-like DNA-binding domain Atg29_N PF18388.1 RKO89128.1 - 2.8 7.8 6.3 1.2 9.0 0.1 2.9 3 0 0 3 3 3 0 Atg29 N-terminal domain Herpes_UL17 PF04559.12 RKO89128.1 - 4.8 5.9 12.4 8.8 5.0 0.0 2.6 1 1 0 2 2 2 0 Herpesvirus UL17 protein Enkurin PF13864.6 RKO89129.1 - 9.6e-22 77.3 2.7 9.6e-22 77.3 2.7 2.1 2 0 0 2 2 2 1 Calmodulin-binding zf-Nse PF11789.8 RKO89130.1 - 2.1e-16 59.5 0.0 3.4e-16 58.8 0.0 1.3 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_UBOX PF13445.6 RKO89130.1 - 2.3e-05 24.3 0.1 3.5e-05 23.7 0.1 1.3 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 RKO89130.1 - 0.00069 19.4 0.1 0.0023 17.8 0.1 1.8 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 RKO89130.1 - 0.0025 18.0 0.5 0.0044 17.3 0.5 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 RKO89130.1 - 0.013 15.7 0.0 0.02 15.0 0.0 1.3 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-MIZ PF02891.20 RKO89130.1 - 0.014 15.2 0.7 0.03 14.1 0.7 1.7 1 1 0 1 1 1 0 MIZ/SP-RING zinc finger zf-C3HC4 PF00097.25 RKO89130.1 - 0.014 15.3 0.0 0.023 14.6 0.0 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 RKO89130.1 - 0.031 14.6 0.3 0.045 14.1 0.3 1.3 1 0 0 1 1 1 0 Ring finger domain zf-C3H2C3 PF17122.5 RKO89130.1 - 0.052 13.6 0.0 0.1 12.7 0.0 1.5 1 0 0 1 1 1 0 Zinc-finger U-box PF04564.15 RKO89130.1 - 0.16 12.1 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 U-box domain Cbl_N2 PF02761.14 RKO89131.1 - 2.7e-06 28.0 0.1 2.6 8.8 0.0 4.0 4 0 0 4 4 4 3 CBL proto-oncogene N-terminus, EF hand-like domain hGDE_N PF14699.6 RKO89131.1 - 0.088 13.0 0.0 0.42 10.8 0.0 2.2 2 0 0 2 2 2 0 N-terminal domain from the human glycogen debranching enzyme Shadoo PF14999.6 RKO89131.1 - 0.55 10.3 9.1 1.6 8.8 8.2 2.1 2 0 0 2 2 2 0 Shadow of prion protein, neuroprotective Phosphoesterase PF04185.14 RKO89132.1 - 0.021 14.0 0.1 0.14 11.4 0.1 1.9 1 1 0 1 1 1 0 Phosphoesterase family PhoLip_ATPase_C PF16212.5 RKO89133.1 - 8.7e-62 209.1 19.6 8.7e-62 209.1 19.6 1.6 2 0 0 2 2 2 1 Phospholipid-translocating P-type ATPase C-terminal Cation_ATPase PF13246.6 RKO89133.1 - 4.5e-12 45.9 0.0 6.5e-11 42.2 0.0 2.7 3 0 0 3 3 3 1 Cation transport ATPase (P-type) Hydrolase PF00702.26 RKO89133.1 - 1.8e-10 41.5 0.0 3.9e-05 24.1 0.0 3.3 3 1 0 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 RKO89133.1 - 5.8e-05 23.0 0.1 0.00075 19.3 0.0 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase DUF4470 PF14737.6 RKO89134.1 - 1.9e-09 37.6 0.1 3.6e-09 36.7 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4470) Kelch_6 PF13964.6 RKO89136.1 - 1.6e-05 25.0 2.3 1.1 9.7 0.0 3.3 3 0 0 3 3 3 3 Kelch motif Kelch_5 PF13854.6 RKO89136.1 - 0.001 19.0 0.6 0.023 14.7 0.3 2.4 2 0 0 2 2 2 1 Kelch motif Kelch_3 PF13415.6 RKO89136.1 - 0.0024 18.1 10.1 0.98 9.8 0.4 3.8 4 1 0 4 4 4 2 Galactose oxidase, central domain Kelch_4 PF13418.6 RKO89136.1 - 0.014 15.4 9.4 0.044 13.8 0.3 3.3 4 0 0 4 4 4 0 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO89137.1 - 1.9e-08 34.3 14.0 0.14 12.5 0.1 5.6 5 1 0 5 5 5 3 Kelch motif Kelch_5 PF13854.6 RKO89137.1 - 4.1e-05 23.4 4.9 0.0034 17.3 0.0 3.2 3 0 0 3 3 3 2 Kelch motif Kelch_2 PF07646.15 RKO89137.1 - 0.00067 19.5 8.7 13 6.0 0.1 5.8 5 1 0 5 5 5 1 Kelch motif Kelch_4 PF13418.6 RKO89137.1 - 0.0027 17.7 14.9 0.79 9.8 0.6 5.0 5 0 0 5 5 5 2 Galactose oxidase, central domain Kelch_3 PF13415.6 RKO89137.1 - 0.012 15.9 9.0 1.4 9.3 0.1 4.5 4 0 0 4 4 4 0 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO89137.1 - 0.016 14.8 21.7 0.099 12.2 0.1 5.2 5 1 0 5 5 5 0 Kelch motif eIF_4EBP PF05456.11 RKO89137.1 - 1.9 8.5 5.0 0.26 11.2 1.0 1.6 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) Laminin_I PF06008.14 RKO89138.1 - 0.0058 16.4 9.2 0.0058 16.4 9.2 2.7 2 1 1 3 3 3 1 Laminin Domain I TPR_MLP1_2 PF07926.12 RKO89138.1 - 0.0076 16.3 11.2 0.0076 16.3 11.2 2.9 3 0 0 3 3 3 1 TPR/MLP1/MLP2-like protein Rab5-bind PF09311.11 RKO89138.1 - 0.0078 15.6 15.1 0.019 14.4 9.6 2.8 1 1 3 4 4 4 2 Rabaptin-like protein DivIVA PF05103.13 RKO89138.1 - 0.013 15.6 0.1 0.013 15.6 0.1 3.1 3 0 0 3 3 3 0 DivIVA protein HALZ PF02183.18 RKO89138.1 - 0.019 15.2 8.1 0.024 14.9 0.6 3.6 3 1 0 3 3 3 0 Homeobox associated leucine zipper ERM PF00769.19 RKO89138.1 - 0.028 14.2 23.2 0.049 13.4 23.2 1.4 1 1 0 1 1 1 0 Ezrin/radixin/moesin family DUF3014 PF11219.8 RKO89138.1 - 0.036 14.3 1.3 0.09 13.0 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3014) Nup54 PF13874.6 RKO89138.1 - 0.14 12.3 17.0 1.3 9.1 8.8 2.5 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 DUF2347 PF09804.9 RKO89138.1 - 0.24 11.0 3.3 1.7 8.2 0.5 2.2 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2347) DUF406 PF04175.12 RKO89138.1 - 0.59 10.6 2.8 0.66 10.5 0.7 2.2 2 0 0 2 2 1 0 Protein of unknown function (DUF406) Jnk-SapK_ap_N PF09744.9 RKO89138.1 - 0.59 10.3 24.4 0.066 13.4 7.0 3.4 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Prefoldin_2 PF01920.20 RKO89138.1 - 0.98 9.4 12.6 1.7 8.6 0.8 3.9 2 2 1 4 4 4 0 Prefoldin subunit Laminin_II PF06009.12 RKO89138.1 - 1.8 8.6 12.5 0.36 10.9 0.8 3.4 2 1 1 3 3 3 0 Laminin Domain II GAS PF13851.6 RKO89138.1 - 2.6 7.4 22.7 1.3 8.3 16.8 2.3 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding BST2 PF16716.5 RKO89138.1 - 3.1 8.5 13.5 0.36 11.4 0.6 3.4 2 1 1 3 3 3 0 Bone marrow stromal antigen 2 DASH_Spc34 PF08657.10 RKO89138.1 - 4 7.2 10.0 1.4 8.7 2.9 2.2 1 1 0 2 2 2 0 DASH complex subunit Spc34 XhlA PF10779.9 RKO89138.1 - 9.9 6.5 6.6 42 4.4 0.1 3.3 2 1 2 4 4 4 0 Haemolysin XhlA DUF1664 PF07889.12 RKO89138.1 - 10 6.2 6.8 10 6.2 0.6 3.1 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) p450 PF00067.22 RKO89139.1 - 4.6e-36 124.6 0.0 5.6e-36 124.3 0.0 1.1 1 0 0 1 1 1 1 Cytochrome P450 TPR_15 PF13429.6 RKO89139.1 - 0.052 12.7 1.4 0.084 12.1 1.0 1.5 1 1 0 1 1 1 0 Tetratricopeptide repeat RTA1 PF04479.13 RKO89140.1 - 6.2e-49 166.4 11.8 8.5e-49 166.0 11.8 1.2 1 0 0 1 1 1 1 RTA1 like protein F-box-like PF12937.7 RKO89142.1 - 2.9e-05 23.9 0.1 0.0001 22.1 0.1 1.9 1 0 0 1 1 1 1 F-box-like PAS_9 PF13426.7 RKO89143.1 - 6.2e-17 61.7 0.0 9.6e-17 61.1 0.0 1.2 1 0 0 1 1 1 1 PAS domain PAS PF00989.25 RKO89143.1 - 1.4e-05 25.0 0.0 3.9e-05 23.6 0.0 1.7 1 1 0 1 1 1 1 PAS fold PAS_4 PF08448.10 RKO89143.1 - 0.089 13.0 0.0 0.23 11.7 0.0 1.7 1 1 0 1 1 1 0 PAS fold WD40 PF00400.32 RKO89146.1 - 7.5e-15 55.1 0.7 1.1e-05 26.1 0.0 4.6 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO89146.1 - 2.6e-06 27.6 0.0 0.12 12.7 0.0 3.9 3 1 2 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain XRN_N PF03159.18 RKO89147.1 - 5.2e-31 107.9 0.0 2.7e-28 99.0 0.0 2.4 1 1 0 1 1 1 1 XRN 5'-3' exonuclease N-terminus WD40 PF00400.32 RKO89148.1 - 5.8e-38 128.2 4.6 3.7e-08 33.9 0.2 5.2 5 0 0 5 5 5 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO89148.1 - 4.3e-10 39.7 0.9 0.0036 17.6 0.0 3.8 1 1 4 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 RKO89148.1 - 0.00077 18.9 0.2 0.46 9.7 0.0 2.9 3 1 1 4 4 4 2 WD40-like domain Nup160 PF11715.8 RKO89148.1 - 0.0011 17.7 0.2 0.96 8.0 0.0 2.6 1 1 0 3 3 3 2 Nucleoporin Nup120/160 CEP19 PF14933.6 RKO89148.1 - 0.0055 17.0 0.1 0.0093 16.3 0.1 1.4 1 1 0 1 1 1 1 CEP19-like protein Frtz PF11768.8 RKO89148.1 - 0.11 10.7 0.0 4 5.7 0.0 2.7 3 0 0 3 3 3 0 WD repeat-containing and planar cell polarity effector protein Fritz DUF747 PF05346.11 RKO89149.1 - 6.5e-95 318.3 2.2 5.7e-93 311.9 2.2 2.1 1 1 0 1 1 1 1 Eukaryotic membrane protein family DASH_Dad4 PF08650.10 RKO89149.1 - 0.2 11.7 0.5 0.34 10.9 0.5 1.3 1 0 0 1 1 1 0 DASH complex subunit Dad4 RasGEF PF00617.19 RKO89150.1 - 1.2e-39 136.4 0.0 1.6e-39 135.9 0.0 1.2 1 0 0 1 1 1 1 RasGEF domain Pea-VEAacid PF08111.11 RKO89151.1 - 0.15 12.4 0.4 0.39 11.1 0.4 1.6 1 0 0 1 1 1 0 Pea-VEAacid family Dus PF01207.17 RKO89152.1 - 1.2e-51 175.6 0.0 3e-51 174.4 0.0 1.6 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) Cdh1_DBD_1 PF18196.1 RKO89152.1 - 0.0071 16.7 0.8 0.012 15.9 0.8 1.3 1 0 0 1 1 1 1 Chromodomain helicase DNA-binding domain 1 zf-CCCH PF00642.24 RKO89152.1 - 0.079 12.9 12.0 2 8.5 0.0 3.0 3 0 0 3 3 3 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Peptidase_U32 PF01136.19 RKO89152.1 - 0.27 10.4 0.9 1.3 8.1 0.0 2.1 2 0 0 2 2 2 0 Peptidase family U32 Acyl-CoA_dh_M PF02770.19 RKO89154.1 - 1.4e-16 60.5 0.0 3.1e-16 59.4 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain ACOX PF01756.19 RKO89154.1 - 1.2e-10 41.3 0.2 1.8e-10 40.7 0.2 1.3 1 0 0 1 1 1 1 Acyl-CoA oxidase Acyl-CoA_dh_1 PF00441.24 RKO89154.1 - 1.9e-06 28.1 0.2 6.2e-06 26.5 0.2 1.8 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_ox_N PF14749.6 RKO89154.1 - 0.00067 20.2 0.0 0.0019 18.7 0.0 1.8 1 1 0 1 1 1 1 Acyl-coenzyme A oxidase N-terminal UPF0126 PF03458.13 RKO89154.1 - 0.072 13.0 0.0 0.25 11.3 0.0 1.9 1 0 0 1 1 1 0 UPF0126 domain Acyl-CoA_dh_N PF02771.16 RKO89154.1 - 0.11 13.1 0.0 0.48 11.1 0.0 2.1 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase, N-terminal domain DUF2855 PF11017.8 RKO89155.1 - 9.6e-57 193.2 0.1 4.5e-55 187.7 0.1 2.6 1 1 0 1 1 1 1 Protein of unknown function (DUF2855) Proteasome PF00227.26 RKO89156.1 - 7e-25 87.6 0.0 8e-25 87.4 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit Na_sulph_symp PF00939.19 RKO89158.1 - 3.2e-06 26.5 8.1 3.6e-06 26.3 8.1 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region CitMHS PF03600.16 RKO89158.1 - 1.6e-05 24.2 11.7 2.1e-05 23.9 11.7 1.1 1 0 0 1 1 1 1 Citrate transporter FxsA PF04186.13 RKO89158.1 - 0.53 10.4 6.5 0.08 13.1 2.1 2.0 2 0 0 2 2 2 0 FxsA cytoplasmic membrane protein Sec1 PF00995.23 RKO89161.1 - 1.4e-129 434.0 0.1 1.6e-129 433.7 0.1 1.1 1 0 0 1 1 1 1 Sec1 family FlgO PF17680.1 RKO89161.1 - 0.0057 16.4 0.1 2.6 7.8 0.0 2.8 3 0 0 3 3 3 2 FlgO protein Mak16 PF04874.14 RKO89161.1 - 0.14 12.8 0.1 0.31 11.7 0.1 1.5 1 0 0 1 1 1 0 Mak16 protein C-terminal region Imm27 PF15590.6 RKO89163.1 - 0.0028 17.4 0.2 0.011 15.5 0.0 2.0 2 0 0 2 2 2 1 Immunity protein 27 RNA_pol_3_Rpc31 PF11705.8 RKO89163.1 - 0.11 12.8 9.1 0.15 12.2 9.1 1.2 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 NOA36 PF06524.12 RKO89163.1 - 0.13 11.6 5.2 0.19 11.0 5.2 1.2 1 0 0 1 1 1 0 NOA36 protein DNA_pol_phi PF04931.13 RKO89163.1 - 5.1 5.1 6.5 6 4.8 6.5 1.1 1 0 0 1 1 1 0 DNA polymerase phi cNMP_binding PF00027.29 RKO89165.1 - 3e-22 78.5 0.5 1.5e-20 73.0 0.1 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Cupin_2 PF07883.11 RKO89165.1 - 0.077 12.7 0.2 0.15 11.8 0.2 1.4 1 0 0 1 1 1 0 Cupin domain zf-C2H2 PF00096.26 RKO89166.1 - 1.4e-09 37.8 9.9 0.00031 21.0 4.2 2.1 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO89166.1 - 3.2e-08 33.7 8.8 0.0018 19.0 0.3 2.1 2 0 0 2 2 2 2 C2H2-type zinc finger zf-met PF12874.7 RKO89166.1 - 4.2e-06 27.0 4.2 0.025 15.0 0.3 2.2 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-H2C2_2 PF13465.6 RKO89166.1 - 4.7e-06 26.8 6.7 7.4e-06 26.2 1.7 2.4 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2_jaz PF12171.8 RKO89166.1 - 1.9e-05 24.8 4.2 0.037 14.3 0.3 2.2 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 RKO89166.1 - 0.00016 21.5 6.2 0.0018 18.2 0.6 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf_C2H2_ZHX PF18387.1 RKO89166.1 - 0.02 14.5 3.2 0.056 13.1 0.1 2.0 2 0 0 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain zf-LYAR PF08790.11 RKO89166.1 - 0.054 13.4 4.5 0.59 10.1 0.2 2.1 2 0 0 2 2 2 0 LYAR-type C2HC zinc finger LIM PF00412.22 RKO89166.1 - 0.12 12.6 5.9 0.44 10.8 6.3 1.7 1 1 0 1 1 1 0 LIM domain zf-C2H2_2 PF12756.7 RKO89166.1 - 0.25 11.7 4.6 1.5 9.2 0.4 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf_UBZ PF18439.1 RKO89166.1 - 0.26 10.9 4.4 1.9 8.2 0.2 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-C2H2_11 PF16622.5 RKO89166.1 - 0.76 9.6 8.5 2 8.2 0.7 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type ubiquitin PF00240.23 RKO89171.1 - 9.7e-35 118.2 0.5 1.9e-34 117.2 0.5 1.5 1 0 0 1 1 1 1 Ubiquitin family Ribosomal_S27 PF01599.19 RKO89171.1 - 5.2e-27 93.8 2.0 5.2e-27 93.8 2.0 1.9 2 0 0 2 2 2 1 Ribosomal protein S27a Rad60-SLD PF11976.8 RKO89171.1 - 4.3e-16 58.5 0.6 4.3e-16 58.5 0.6 1.5 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 RKO89171.1 - 9.4e-06 26.0 0.3 7.6e-05 23.1 0.1 2.3 2 1 0 2 2 2 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 RKO89171.1 - 0.00044 20.3 0.7 0.00099 19.2 0.7 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 RKO89171.1 - 0.0062 16.9 0.9 0.01 16.2 0.1 1.7 1 1 1 2 2 2 1 Ubiquitin-like domain TBK1_ULD PF18396.1 RKO89171.1 - 0.0069 16.3 0.0 0.01 15.7 0.0 1.3 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain DUF2407 PF10302.9 RKO89171.1 - 0.0094 16.5 1.0 0.013 16.0 1.0 1.2 1 0 0 1 1 1 1 DUF2407 ubiquitin-like domain Ubiquitin_4 PF18036.1 RKO89171.1 - 0.014 15.4 1.1 4 7.5 0.2 2.4 2 0 0 2 2 2 0 Ubiquitin-like domain DEAD_assoc PF08494.11 RKO89172.1 - 0.029 14.2 0.0 0.03 14.1 0.0 1.1 1 0 0 1 1 1 0 DEAD/H associated TSCPD PF12637.7 RKO89172.1 - 0.19 12.0 0.0 0.27 11.5 0.0 1.2 1 0 0 1 1 1 0 TSCPD domain LRR_8 PF13855.6 RKO89174.1 - 1.5e-16 59.9 0.3 5e-08 32.6 0.0 2.1 2 0 0 2 2 2 2 Leucine rich repeat LRR_4 PF12799.7 RKO89174.1 - 3.8e-14 52.6 2.6 2.5e-06 27.7 0.2 3.0 2 1 1 3 3 3 3 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 RKO89174.1 - 5.7e-05 22.7 0.1 6.5e-05 22.5 0.1 1.1 1 0 0 1 1 1 1 Leucine-rich repeat LRR_6 PF13516.6 RKO89174.1 - 6.8e-05 22.6 6.6 3.2 8.0 0.1 4.3 4 0 0 4 4 4 3 Leucine Rich repeat LRR_1 PF00560.33 RKO89174.1 - 0.00014 22.0 1.3 11 7.0 0.0 4.1 4 0 0 4 4 4 1 Leucine Rich Repeat RPEL PF02755.15 RKO89175.1 - 0.0002 21.0 5.1 0.00043 19.9 0.4 2.6 2 0 0 2 2 2 1 RPEL repeat MHB PF16525.5 RKO89175.1 - 0.12 12.6 0.2 0.49 10.7 0.2 1.9 2 0 0 2 2 2 0 Haemophore, haem-binding Actin PF00022.19 RKO89176.1 - 9.2e-41 139.8 0.0 2.5e-26 92.3 0.0 2.9 2 1 0 2 2 2 2 Actin MreB_Mbl PF06723.13 RKO89176.1 - 6e-14 51.6 0.0 1.3e-13 50.5 0.0 1.4 1 1 0 1 1 1 1 MreB/Mbl protein FtsA PF14450.6 RKO89176.1 - 0.00014 22.2 0.0 0.00026 21.4 0.0 1.4 1 0 0 1 1 1 1 Cell division protein FtsA GFA PF04828.14 RKO89177.1 - 0.0017 18.6 0.1 0.18 12.2 0.0 2.1 1 1 1 2 2 2 2 Glutathione-dependent formaldehyde-activating enzyme Zn_ribbon_SprT PF17283.2 RKO89177.1 - 0.038 13.9 0.8 9 6.3 0.4 2.3 2 0 0 2 2 2 0 SprT-like zinc ribbon domain Desulfoferrod_N PF06397.12 RKO89177.1 - 0.081 12.6 0.4 0.14 11.8 0.4 1.4 1 0 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain RNHCP PF12647.7 RKO89177.1 - 0.081 12.9 0.1 1.3 9.1 0.0 2.2 2 0 0 2 2 2 0 RNHCP domain zf-ribbon_3 PF13248.6 RKO89177.1 - 0.11 12.0 0.2 9 5.9 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Cupin_3 PF05899.12 RKO89177.1 - 0.13 12.0 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF861) SelB-wing_2 PF09106.11 RKO89178.1 - 0.055 13.7 0.1 0.37 11.0 0.0 2.5 3 0 0 3 3 3 0 Elongation factor SelB, winged helix PMP1_2 PF08114.11 RKO89179.1 - 0.3 10.9 0.6 0.51 10.1 0.6 1.3 1 0 0 1 1 1 0 ATPase proteolipid family AAA_13 PF13166.6 RKO89180.1 - 0.071 11.8 6.7 0.091 11.4 6.7 1.1 1 0 0 1 1 1 0 AAA domain DUF1943 PF09172.11 RKO89180.1 - 0.1 11.8 6.6 0.15 11.3 6.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Atg14 PF10186.9 RKO89180.1 - 7.6 5.5 11.9 11 5.0 11.9 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 NDK PF00334.19 RKO89181.1 - 0.002 18.1 0.0 0.0038 17.2 0.0 1.4 1 0 0 1 1 1 1 Nucleoside diphosphate kinase UvdE PF03851.14 RKO89181.1 - 0.11 11.8 0.0 0.18 11.0 0.0 1.3 1 0 0 1 1 1 0 UV-endonuclease UvdE DUF3280 PF11684.8 RKO89182.1 - 0.00076 19.9 0.3 0.0014 19.1 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2380) Glycos_transf_2 PF00535.26 RKO89183.1 - 0.038 13.8 0.4 0.31 10.8 0.1 2.2 1 1 1 2 2 2 0 Glycosyl transferase family 2 DUF4197 PF13852.6 RKO89183.1 - 0.085 12.5 1.2 2 8.1 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF4197) Methyltransf_23 PF13489.6 RKO89184.1 - 1e-22 80.8 0.0 1.3e-22 80.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 RKO89184.1 - 7.8e-12 45.7 0.0 1.2e-11 45.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 RKO89184.1 - 1.5e-08 35.2 0.0 2.4e-08 34.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 RKO89184.1 - 8.8e-07 28.5 0.0 5.3e-06 25.9 0.0 1.9 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 RKO89184.1 - 1.7e-06 28.7 0.0 2.8e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO89184.1 - 0.00027 20.8 0.0 0.00043 20.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain E1_DerP2_DerF2 PF02221.15 RKO89185.1 - 1e-19 71.3 0.0 1.2e-19 71.1 0.0 1.1 1 0 0 1 1 1 1 ML domain COPIIcoated_ERV PF07970.12 RKO89187.1 - 2.7e-40 138.6 0.0 4e-40 138.0 0.0 1.2 1 0 0 1 1 1 1 Endoplasmic reticulum vesicle transporter ERGIC_N PF13850.6 RKO89187.1 - 3e-21 75.5 0.0 7.2e-21 74.3 0.0 1.5 1 0 0 1 1 1 1 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) CBFD_NFYB_HMF PF00808.23 RKO89188.1 - 1.5e-28 98.8 0.1 1.9e-28 98.6 0.1 1.1 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 RKO89188.1 - 7.4e-06 26.4 0.0 8.3e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 RKO89188.1 - 0.00062 19.9 0.0 0.00071 19.7 0.0 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TFIID-18kDa PF02269.16 RKO89188.1 - 0.00095 19.2 0.0 0.0013 18.7 0.0 1.2 1 0 0 1 1 1 1 Transcription initiation factor IID, 18kD subunit Bromo_TP PF07524.13 RKO89188.1 - 0.039 14.0 0.0 0.061 13.3 0.0 1.3 1 0 0 1 1 1 0 Bromodomain associated UQ_con PF00179.26 RKO89189.1 - 6e-11 42.2 0.0 6.5e-11 42.1 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 RKO89189.1 - 0.0051 17.1 0.0 0.006 16.9 0.0 1.2 1 0 0 1 1 1 1 RWD domain F-box-like PF12937.7 RKO89190.1 - 1.9e-09 37.2 0.1 9e-09 35.1 0.1 2.3 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO89190.1 - 1.9e-06 27.6 0.3 6.8e-06 25.8 0.3 2.0 1 0 0 1 1 1 1 F-box domain LRR_6 PF13516.6 RKO89190.1 - 0.00078 19.3 6.5 3.8 7.8 0.0 5.8 6 0 0 6 6 6 2 Leucine Rich repeat LRR_4 PF12799.7 RKO89190.1 - 0.027 14.9 7.0 12 6.4 0.0 6.7 7 3 0 7 7 7 0 Leucine Rich repeats (2 copies) HLH PF00010.26 RKO89193.1 - 0.00021 21.2 0.0 0.00031 20.6 0.0 1.3 1 0 0 1 1 1 1 Helix-loop-helix DNA-binding domain MMR_HSR1 PF01926.23 RKO89194.1 - 2.3e-21 76.0 0.0 3.5e-21 75.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 RKO89194.1 - 4.9e-07 29.4 0.0 8.3e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B MeaB PF03308.16 RKO89194.1 - 0.013 14.5 0.0 0.02 13.9 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Dynamin_N PF00350.23 RKO89194.1 - 0.079 13.0 0.0 0.25 11.4 0.0 2.1 1 1 0 1 1 1 0 Dynamin family RRM_1 PF00076.22 RKO89196.1 - 4.3e-21 74.5 0.0 5.4e-21 74.2 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 RKO89196.1 - 0.017 15.2 0.0 0.03 14.4 0.0 1.3 1 1 0 1 1 1 0 RNA recognition motif AAA_23 PF13476.6 RKO89197.1 - 0.41 11.1 12.0 0.085 13.4 7.7 1.9 2 0 0 2 2 2 0 AAA domain Exo84_C PF16528.5 RKO89197.1 - 2.2 8.1 6.4 0.2 11.5 0.8 2.1 2 1 1 3 3 3 0 Exocyst component 84 C-terminal Pkinase PF00069.25 RKO89198.1 - 6.7e-20 71.5 0.0 8e-20 71.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO89198.1 - 1.7e-16 60.3 0.0 2.2e-16 59.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO89198.1 - 0.00014 21.9 0.1 0.00019 21.4 0.1 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 RKO89198.1 - 0.18 10.5 0.0 0.21 10.3 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Dynamitin PF04912.14 RKO89199.1 - 0.012 15.0 1.1 0.014 14.7 1.1 1.1 1 0 0 1 1 1 0 Dynamitin FNIP_C PF14638.6 RKO89199.1 - 0.097 12.3 0.4 0.16 11.6 0.4 1.5 1 1 0 1 1 1 0 Folliculin-interacting protein C-terminus Exonuc_VII_L PF02601.15 RKO89199.1 - 2.1 7.8 9.0 3 7.4 9.0 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Vac_Fusion PF02346.16 RKO89199.1 - 7.7 6.2 7.7 1.3 8.7 2.2 2.5 2 1 0 2 2 2 0 Chordopoxvirus multifunctional envelope protein A27 PAS_12 PF18095.1 RKO89200.1 - 0.027 14.1 0.0 0.031 13.9 0.0 1.3 1 1 0 1 1 1 0 UPF0242 C-terminal PAS-like domain ACOX PF01756.19 RKO89201.1 - 1.1e-24 87.0 0.0 1.2e-24 86.9 0.0 1.0 1 0 0 1 1 1 1 Acyl-CoA oxidase Dioxygenase_N PF04444.14 RKO89201.1 - 0.1 12.5 0.0 0.2 11.6 0.0 1.5 2 0 0 2 2 2 0 Catechol dioxygenase N terminus ACOX PF01756.19 RKO89203.1 - 1.1e-24 87.0 0.0 1.2e-24 86.9 0.0 1.0 1 0 0 1 1 1 1 Acyl-CoA oxidase Dioxygenase_N PF04444.14 RKO89203.1 - 0.1 12.5 0.0 0.2 11.6 0.0 1.5 2 0 0 2 2 2 0 Catechol dioxygenase N terminus HNH_2 PF13391.6 RKO89204.1 - 0.0015 18.6 0.0 0.0048 17.0 0.0 1.8 2 0 0 2 2 2 1 HNH endonuclease TRAM_LAG1_CLN8 PF03798.16 RKO89206.1 - 9.5e-20 71.2 8.2 1.3e-19 70.7 8.2 1.2 1 0 0 1 1 1 1 TLC domain GATA PF00320.27 RKO89208.1 - 1.2e-14 53.6 1.5 2.3e-14 52.7 1.5 1.5 1 0 0 1 1 1 1 GATA zinc finger NifU_N PF01592.16 RKO89209.1 - 3.1e-45 153.4 0.0 3.5e-45 153.3 0.0 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain adh_short_C2 PF13561.6 RKO89212.1 - 8.6e-39 133.5 0.8 3e-28 99.0 0.0 2.0 1 1 1 2 2 2 2 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO89212.1 - 4.7e-36 124.1 0.2 4.7e-35 120.8 0.2 1.9 1 1 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 RKO89212.1 - 3.4e-07 30.4 0.2 1.8e-05 24.7 0.1 2.3 2 0 0 2 2 2 1 KR domain Enoyl_reductase PF12241.8 RKO89212.1 - 0.0082 15.5 0.0 0.015 14.7 0.0 1.4 1 0 0 1 1 1 1 Trans-2-enoyl-CoA reductase catalytic region Epimerase PF01370.21 RKO89212.1 - 0.12 11.8 0.0 0.21 11.0 0.0 1.4 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family RbcS PF12338.8 RKO89212.1 - 0.98 9.7 4.5 4 7.7 1.8 2.7 2 0 0 2 2 2 0 Ribulose-1,5-bisphosphate carboxylase small subunit adh_short_C2 PF13561.6 RKO89213.1 - 1.3e-46 159.1 3.8 1.8e-39 135.7 0.1 2.0 1 1 1 2 2 2 2 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO89213.1 - 1.7e-34 119.0 1.7 9.1e-24 84.0 0.0 2.1 1 1 1 2 2 2 2 short chain dehydrogenase KR PF08659.10 RKO89213.1 - 6.1e-05 23.0 2.5 0.0044 17.0 0.2 2.2 1 1 1 2 2 2 2 KR domain Epimerase PF01370.21 RKO89213.1 - 0.0017 17.9 0.1 0.13 11.7 0.1 2.2 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family AdoHcyase_NAD PF00670.21 RKO89213.1 - 0.01 15.9 1.0 0.018 15.1 0.8 1.4 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KdpD PF02702.17 RKO89213.1 - 0.019 14.5 0.0 0.025 14.1 0.0 1.2 1 0 0 1 1 1 0 Osmosensitive K+ channel His kinase sensor domain THF_DHG_CYH_C PF02882.19 RKO89213.1 - 0.051 12.9 0.0 0.092 12.1 0.0 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RmlD_sub_bind PF04321.17 RKO89213.1 - 0.17 11.0 0.6 0.31 10.1 0.1 1.6 2 0 0 2 2 2 0 RmlD substrate binding domain DnaJ_C PF01556.18 RKO89214.1 - 5.6e-07 29.8 0.0 7.2e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain Glyoxal_oxid_N PF07250.11 RKO89215.1 - 1.9e-11 43.7 0.1 5.5e-05 22.5 0.0 2.1 2 0 0 2 2 2 2 Glyoxal oxidase N-terminus Kelch_4 PF13418.6 RKO89215.1 - 0.05 13.6 0.0 0.17 11.9 0.0 1.9 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO89215.1 - 0.091 12.8 0.0 0.21 11.6 0.0 1.6 1 0 0 1 1 1 0 Kelch motif Peptidase_S15 PF02129.18 RKO89215.1 - 0.11 12.1 0.1 0.16 11.5 0.1 1.2 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_6 PF12697.7 RKO89216.1 - 0.00073 20.2 0.0 0.00086 20.0 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 RKO89216.1 - 0.00083 19.5 0.2 0.0013 18.9 0.2 1.3 1 0 0 1 1 1 1 Thioesterase domain Hydrolase_4 PF12146.8 RKO89216.1 - 0.018 14.3 0.0 0.036 13.3 0.0 1.7 1 1 0 1 1 1 0 Serine aminopeptidase, S33 LCAT PF02450.15 RKO89216.1 - 0.018 14.2 0.0 0.085 12.0 0.0 1.9 1 1 1 2 2 2 0 Lecithin:cholesterol acyltransferase PGAP1 PF07819.13 RKO89216.1 - 0.051 13.3 0.0 0.08 12.6 0.0 1.3 1 0 0 1 1 1 0 PGAP1-like protein Acyl_transf_1 PF00698.21 RKO89216.1 - 0.057 12.9 0.3 0.09 12.3 0.3 1.2 1 0 0 1 1 1 0 Acyl transferase domain adh_short PF00106.25 RKO89219.1 - 1.1e-09 38.1 0.0 1.3e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO89219.1 - 1.7e-07 31.1 0.0 1.9e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase HTH_Tnp_IS1 PF12759.7 RKO89219.1 - 0.094 12.3 0.0 0.18 11.4 0.0 1.5 1 0 0 1 1 1 0 InsA C-terminal domain RMMBL PF07521.12 RKO89220.1 - 0.0044 16.9 0.0 0.0098 15.8 0.0 1.5 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain DRMBL PF07522.14 RKO89220.1 - 0.0082 16.3 0.0 0.018 15.2 0.0 1.5 1 0 0 1 1 1 1 DNA repair metallo-beta-lactamase Herpes_UL16 PF03044.14 RKO89221.1 - 0.087 12.1 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus UL16/UL94 family HMG_box PF00505.19 RKO89223.1 - 4.4e-08 33.4 2.2 1.5e-07 31.7 2.2 1.8 1 1 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 RKO89223.1 - 0.017 15.7 0.5 0.031 14.9 0.5 1.4 1 0 0 1 1 1 0 HMG-box domain ECH_1 PF00378.20 RKO89224.1 - 1.1e-37 129.7 0.0 1.4e-37 129.4 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 RKO89224.1 - 2.9e-17 63.2 0.0 3.8e-17 62.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase F-box-like PF12937.7 RKO89228.1 - 0.0012 18.6 0.7 0.051 13.5 0.1 2.7 2 0 0 2 2 2 2 F-box-like zf-C2H2 PF00096.26 RKO89229.1 - 5.5e-12 45.5 10.3 1.4e-05 25.3 0.2 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 RKO89229.1 - 4.8e-08 33.1 1.3 4.8e-08 33.1 1.3 2.9 3 0 0 3 3 3 1 Zinc-finger double domain zf-C2H2_4 PF13894.6 RKO89229.1 - 6.3e-08 32.8 8.6 0.0015 19.2 3.2 2.1 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 RKO89229.1 - 2e-05 24.7 0.9 0.0027 18.0 0.0 2.2 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-MYST PF17772.1 RKO89229.1 - 0.0017 17.9 1.3 0.022 14.4 0.7 2.0 2 0 0 2 2 2 1 MYST family zinc finger domain zf-C2H2_6 PF13912.6 RKO89229.1 - 0.0017 18.3 0.1 0.0017 18.3 0.1 2.3 2 1 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_11 PF16622.5 RKO89229.1 - 0.0072 16.1 2.7 0.17 11.7 0.0 2.2 2 0 0 2 2 2 1 zinc-finger C2H2-type zf-met PF12874.7 RKO89229.1 - 0.012 16.0 1.0 5.1 7.6 0.0 2.2 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-C2H2_8 PF15909.5 RKO89229.1 - 0.015 15.6 0.7 0.017 15.4 0.7 1.1 1 0 0 1 1 1 0 C2H2-type zinc ribbon Drf_GBD PF06371.13 RKO89230.1 - 3.7e-05 23.4 0.0 0.00018 21.1 0.0 1.9 2 0 0 2 2 2 1 Diaphanous GTPase-binding Domain ANTH PF07651.16 RKO89231.1 - 2.1e-14 53.2 0.0 2.5e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 ANTH domain DUF3199 PF11436.8 RKO89231.1 - 0.036 14.1 0.0 0.054 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3199) UPF0302 PF08864.10 RKO89231.1 - 0.15 12.2 0.0 0.23 11.6 0.0 1.4 1 0 0 1 1 1 0 UPF0302 domain Dynein_C PF18199.1 RKO89233.1 - 1e-112 376.4 0.0 1e-112 376.4 0.0 2.1 3 0 0 3 3 3 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 RKO89233.1 - 2.9e-89 297.9 3.1 4.2e-89 297.4 0.1 2.8 3 0 0 3 3 3 1 ATP-binding dynein motor region AAA_lid_11 PF18198.1 RKO89233.1 - 1.9e-62 209.9 0.1 3.7e-62 209.0 0.1 1.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain MT PF12777.7 RKO89233.1 - 2e-51 175.0 9.1 3.5e-51 174.3 9.1 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Dynein_heavy PF03028.15 RKO89233.1 - 3.9e-46 156.0 0.0 5e-44 149.2 0.0 3.1 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_8 PF12780.7 RKO89233.1 - 2.3e-06 27.1 0.2 2.3e-06 27.1 0.2 1.8 2 0 0 2 2 2 1 P-loop containing dynein motor region D4 XRN_M PF17846.1 RKO89233.1 - 0.0022 17.0 0.0 0.0022 17.0 0.0 2.6 3 0 0 3 3 3 1 Xrn1 helical domain Laminin_II PF06009.12 RKO89233.1 - 0.23 11.5 11.2 0.36 10.8 0.7 2.9 2 0 0 2 2 2 0 Laminin Domain II Mcm10 PF09332.11 RKO89233.1 - 9.1 5.6 14.6 0.33 10.3 4.3 2.2 2 0 0 2 2 2 0 Mcm10 replication factor LIM PF00412.22 RKO89237.1 - 6.2e-33 112.8 19.0 9.8e-14 51.3 2.8 3.1 3 0 0 3 3 3 3 LIM domain XPA_N PF01286.18 RKO89237.1 - 0.095 12.8 0.8 0.095 12.8 0.8 4.6 6 0 0 6 6 6 0 XPA protein N-terminal DUF2256 PF10013.9 RKO89237.1 - 0.1 12.7 16.2 3.4 7.9 0.1 5.0 4 1 1 5 5 5 0 Uncharacterized protein conserved in bacteria (DUF2256) Ribosomal_L37e PF01907.19 RKO89237.1 - 0.71 10.1 0.1 0.71 10.1 0.1 3.9 4 0 0 4 4 4 0 Ribosomal protein L37e zf-C3HC4_3 PF13920.6 RKO89237.1 - 0.74 9.7 24.9 1.4 8.8 0.1 5.1 3 1 3 6 6 6 0 Zinc finger, C3HC4 type (RING finger) Porphobil_deam PF01379.20 RKO89239.1 - 3.1e-77 258.7 0.0 3.9e-77 258.4 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 RKO89239.1 - 1.3e-17 63.9 0.2 2.2e-17 63.2 0.2 1.4 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain CDC27 PF09507.10 RKO89240.1 - 0.1 11.9 8.4 0.16 11.4 8.4 1.3 1 1 0 1 1 1 0 DNA polymerase subunit Cdc27 Ndc1_Nup PF09531.10 RKO89240.1 - 1.1 7.9 5.9 1.3 7.6 5.9 1.3 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup EF-hand_4 PF12763.7 RKO89245.1 - 1.4e-32 111.7 0.0 2.9e-13 49.7 0.0 3.2 3 0 0 3 3 3 3 Cytoskeletal-regulatory complex EF hand EF-hand_6 PF13405.6 RKO89245.1 - 2.4e-08 33.3 0.5 0.58 10.2 0.1 5.0 5 0 0 5 5 5 1 EF-hand domain EF-hand_7 PF13499.6 RKO89245.1 - 9.3e-06 26.0 0.0 0.00068 20.0 0.1 3.4 4 0 0 4 4 3 1 EF-hand domain pair EF-hand_1 PF00036.32 RKO89245.1 - 0.00015 21.0 0.2 0.99 9.1 0.0 4.4 5 0 0 5 5 5 1 EF hand FPP PF05911.11 RKO89245.1 - 0.0042 15.3 3.2 0.0059 14.9 3.2 1.1 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil YabA PF06156.13 RKO89245.1 - 0.013 16.1 2.0 4.3 8.0 0.6 2.2 2 0 0 2 2 2 0 Initiation control protein YabA Tup_N PF08581.10 RKO89245.1 - 0.023 15.0 2.1 0.29 11.5 0.1 2.2 2 0 0 2 2 2 0 Tup N-terminal UPF0242 PF06785.11 RKO89245.1 - 0.088 12.9 5.9 0.1 12.7 4.3 1.7 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus BLOC1_2 PF10046.9 RKO89245.1 - 0.21 11.9 2.4 3.5 8.0 0.2 2.4 1 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 CENP-F_leu_zip PF10473.9 RKO89245.1 - 0.21 11.6 7.9 9.7 6.2 0.3 2.3 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF3450 PF11932.8 RKO89245.1 - 0.32 10.3 9.5 1.4 8.1 3.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) ATG16 PF08614.11 RKO89245.1 - 0.4 10.9 15.1 1.5 9.0 2.5 2.2 1 1 0 2 2 2 0 Autophagy protein 16 (ATG16) GAS PF13851.6 RKO89245.1 - 0.4 10.0 6.0 0.44 9.9 2.8 2.0 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding Spc7 PF08317.11 RKO89245.1 - 0.46 9.3 9.5 1.1 8.1 8.2 1.8 1 1 0 1 1 1 0 Spc7 kinetochore protein EspB_PE PF18625.1 RKO89245.1 - 0.6 10.6 5.1 1.2 9.6 4.2 2.0 2 0 0 2 2 1 0 ESX-1 secreted protein B PE domain SHE3 PF17078.5 RKO89245.1 - 0.72 9.5 3.6 0.59 9.8 1.9 1.6 2 0 0 2 2 2 0 SWI5-dependent HO expression protein 3 HrpB7 PF09486.10 RKO89245.1 - 1.3 9.3 20.2 1.6 9.1 10.5 2.2 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) TMF_TATA_bd PF12325.8 RKO89245.1 - 1.7 8.9 7.5 0.56 10.4 2.1 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding SPX PF03105.19 RKO89245.1 - 2.4 8.0 5.2 4.6 7.1 0.7 2.1 2 0 0 2 2 2 0 SPX domain THOC7 PF05615.13 RKO89245.1 - 2.8 8.3 10.2 1.1 9.6 7.1 1.8 1 1 1 2 2 2 0 Tho complex subunit 7 BST2 PF16716.5 RKO89245.1 - 3.2 8.4 6.7 0.71 10.5 0.8 2.4 1 1 2 3 3 3 0 Bone marrow stromal antigen 2 DUF5082 PF16888.5 RKO89245.1 - 3.8 7.8 5.4 17 5.7 1.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) APG6_N PF17675.1 RKO89245.1 - 4 8.0 17.8 2.4 8.7 4.4 2.7 2 1 1 3 3 3 0 Apg6 coiled-coil region TPR_MLP1_2 PF07926.12 RKO89245.1 - 4.9 7.2 14.0 3.3 7.8 11.0 1.9 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Fez1 PF06818.15 RKO89245.1 - 5.3 7.4 9.5 9.6 6.6 9.5 1.3 1 0 0 1 1 1 0 Fez1 DUF2968 PF11180.8 RKO89245.1 - 9.8 5.8 13.3 1.4 8.5 4.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) ChAPs PF09295.10 RKO89246.1 - 2e-06 27.1 0.5 2.4e-06 26.8 0.5 1.1 1 0 0 1 1 1 1 ChAPs (Chs5p-Arf1p-binding proteins) Methyltransf_31 PF13847.6 RKO89247.1 - 2.4e-05 24.2 0.1 3.4e-05 23.7 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 RKO89247.1 - 8.4e-05 23.2 0.0 0.00014 22.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 RKO89247.1 - 0.00017 22.2 0.0 0.00032 21.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 RKO89247.1 - 0.00024 21.7 0.0 0.00044 20.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain DOT1 PF08123.13 RKO89247.1 - 0.0004 20.0 0.6 0.0068 16.0 0.6 2.2 1 1 0 1 1 1 1 Histone methylation protein DOT1 CheR PF01739.18 RKO89247.1 - 0.00074 19.1 0.1 0.001 18.6 0.1 1.2 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain Met_10 PF02475.16 RKO89247.1 - 0.016 14.9 0.1 0.024 14.4 0.1 1.2 1 0 0 1 1 1 0 Met-10+ like-protein Methyltransf_18 PF12847.7 RKO89247.1 - 0.03 14.3 0.0 0.052 13.5 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Myosin_head PF00063.21 RKO89250.1 - 1.3e-61 208.8 0.0 1.5e-61 208.5 0.0 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) XPC-binding PF09280.11 RKO89250.1 - 0.046 13.5 0.0 0.094 12.5 0.0 1.5 1 0 0 1 1 1 0 XPC-binding domain Myosin_tail_1 PF01576.19 RKO89251.1 - 9e-14 50.3 24.3 9.8e-14 50.2 24.3 1.0 1 0 0 1 1 1 1 Myosin tail DUF4790 PF16037.5 RKO89251.1 - 0.008 16.6 1.7 0.014 15.8 1.7 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4790) ADIP PF11559.8 RKO89251.1 - 0.033 14.3 17.6 0.037 14.1 5.7 2.1 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding SYCE1 PF15233.6 RKO89251.1 - 0.043 13.9 17.4 0.035 14.1 16.5 1.3 1 1 0 1 1 1 0 Synaptonemal complex central element protein 1 BST2 PF16716.5 RKO89251.1 - 0.084 13.5 17.2 0.9 10.2 4.4 2.4 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 DASH_Dad4 PF08650.10 RKO89251.1 - 0.12 12.4 6.6 0.79 9.7 0.4 2.9 1 1 2 3 3 3 0 DASH complex subunit Dad4 CALCOCO1 PF07888.11 RKO89251.1 - 0.13 11.1 22.2 0.14 11.0 22.2 1.0 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like SlyX PF04102.12 RKO89251.1 - 0.17 12.6 12.6 1.3 9.7 1.6 2.6 1 1 1 2 2 2 0 SlyX HalX PF08663.10 RKO89251.1 - 0.17 12.2 11.5 0.22 11.8 0.6 3.1 2 1 1 3 3 3 0 HalX domain Fib_alpha PF08702.10 RKO89251.1 - 0.23 11.6 12.4 0.48 10.6 6.5 2.1 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Lebercilin PF15619.6 RKO89251.1 - 0.24 11.0 22.7 0.044 13.5 14.5 1.6 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease Golgin_A5 PF09787.9 RKO89251.1 - 0.37 10.2 20.0 0.45 9.9 20.0 1.0 1 0 0 1 1 1 0 Golgin subfamily A member 5 ATG16 PF08614.11 RKO89251.1 - 0.44 10.7 20.3 1.6 8.9 7.7 2.0 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) ALMT PF11744.8 RKO89251.1 - 0.45 9.3 5.3 0.49 9.2 5.3 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter CC2-LZ PF16516.5 RKO89251.1 - 0.71 10.3 16.4 0.21 12.0 9.6 2.3 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Syntaxin-6_N PF09177.11 RKO89251.1 - 0.76 10.4 13.0 0.96 10.0 5.6 2.4 1 1 1 2 2 2 0 Syntaxin 6, N-terminal FUSC PF04632.12 RKO89251.1 - 0.93 7.9 2.8 0.94 7.9 2.8 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Uds1 PF15456.6 RKO89251.1 - 1 9.6 16.5 0.29 11.3 10.1 2.1 1 1 1 2 2 2 0 Up-regulated During Septation TMPIT PF07851.13 RKO89251.1 - 1.2 8.3 13.4 0.45 9.7 10.8 1.6 1 1 0 1 1 1 0 TMPIT-like protein TolA_bind_tri PF16331.5 RKO89251.1 - 1.3 9.1 12.1 12 6.1 1.1 3.0 1 1 2 3 3 3 0 TolA binding protein trimerisation CENP-H PF05837.12 RKO89251.1 - 1.3 9.4 20.9 6.7 7.2 13.4 2.0 1 1 1 2 2 2 0 Centromere protein H (CENP-H) Imm7 PF15585.6 RKO89251.1 - 2 8.7 6.3 5.1 7.4 0.5 2.6 1 1 2 3 3 3 0 Immunity protein 7 DUF4337 PF14235.6 RKO89251.1 - 2.1 8.5 12.7 0.15 12.2 2.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4337) DUF948 PF06103.11 RKO89251.1 - 3.2 8.1 7.7 85 3.5 7.7 2.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF4407 PF14362.6 RKO89251.1 - 3.3 7.0 8.6 4.1 6.7 8.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) SLATT_fungal PF18142.1 RKO89251.1 - 3.7 7.5 7.6 24 4.9 0.1 2.0 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain DUF724 PF05266.14 RKO89251.1 - 4.6 7.0 21.1 0.79 9.5 12.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF724) DUF3573 PF12097.8 RKO89251.1 - 5 5.8 4.8 2.1 7.1 0.9 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3573) DivIC PF04977.15 RKO89251.1 - 7 6.5 18.0 5.5 6.8 0.3 3.1 1 1 2 3 3 3 0 Septum formation initiator H-kinase_dim PF02895.14 RKO89251.1 - 9.2 6.7 10.1 2.3 8.7 1.4 3.0 1 1 1 3 3 3 0 Signal transducing histidine kinase, homodimeric domain Acyl-CoA_dh_1 PF00441.24 RKO89253.1 - 2.5e-42 144.6 0.0 3.2e-42 144.3 0.0 1.1 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 RKO89253.1 - 3.4e-19 68.8 0.0 6.3e-19 68.0 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 RKO89253.1 - 2.6e-13 50.4 0.0 3.7e-13 49.9 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Zn-C2H2_12 PF18112.1 RKO89254.1 - 0.11 13.0 0.0 0.25 11.9 0.0 1.6 1 0 0 1 1 1 0 Autophagy receptor zinc finger-C2H2 domain zf-U1 PF06220.12 RKO89256.1 - 0.42 10.4 2.0 0.95 9.3 0.0 2.4 2 1 0 2 2 2 0 U1 zinc finger Abhydrolase_1 PF00561.20 RKO89258.1 - 1.5e-44 152.6 0.0 2.8e-44 151.7 0.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold Esterase PF00756.20 RKO89258.1 - 6.8e-06 25.9 0.0 1.1e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 Putative esterase Hydrolase_4 PF12146.8 RKO89258.1 - 0.017 14.4 0.0 0.2 10.9 0.1 2.1 2 0 0 2 2 2 0 Serine aminopeptidase, S33 DEAD_2 PF06733.15 RKO89259.1 - 1.3e-50 171.5 0.3 1.9e-50 171.0 0.3 1.2 1 0 0 1 1 1 1 DEAD_2 DEAD PF00270.29 RKO89259.1 - 6.5e-06 26.0 0.0 4.4e-05 23.3 0.0 2.1 1 1 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 RKO89259.1 - 1.1e-05 25.6 0.1 0.015 15.3 0.1 2.3 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit PhoH PF02562.16 RKO89259.1 - 0.0012 18.4 0.1 0.034 13.6 0.0 2.2 2 0 0 2 2 2 1 PhoH-like protein AAA_30 PF13604.6 RKO89259.1 - 0.0087 15.8 0.1 0.079 12.7 0.1 2.1 2 0 0 2 2 2 1 AAA domain T2SSE PF00437.20 RKO89259.1 - 0.067 12.2 0.0 0.12 11.4 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein tRNA_bind_2 PF13725.6 RKO89259.1 - 0.12 12.0 0.2 0.28 10.8 0.2 1.5 1 0 0 1 1 1 0 Possible tRNA binding domain Histone PF00125.24 RKO89260.1 - 2.6e-23 82.8 0.1 3.5e-23 82.4 0.1 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 RKO89260.1 - 4.2e-07 30.2 0.0 4.2e-07 30.2 0.0 2.0 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID_20kDa PF03847.13 RKO89260.1 - 0.00075 19.9 0.0 0.0014 19.1 0.0 1.4 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A YscO-like PF16789.5 RKO89260.1 - 0.0056 16.7 0.2 0.007 16.4 0.2 1.2 1 0 0 1 1 1 1 YscO-like protein Histone_H2A_C PF16211.5 RKO89261.1 - 2.6e-21 75.0 3.0 4.3e-21 74.4 3.0 1.4 1 0 0 1 1 1 1 C-terminus of histone H2A Histone PF00125.24 RKO89261.1 - 3.2e-15 56.6 0.0 4.2e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 RKO89261.1 - 2.9e-05 24.2 0.0 3.8e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone SNAPc_SNAP43 PF09808.9 RKO89262.1 - 1.2e-16 61.2 0.0 1.8e-16 60.6 0.0 1.2 1 0 0 1 1 1 1 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 Prefoldin PF02996.17 RKO89263.1 - 9.5e-10 38.4 0.0 1.4e-09 37.9 0.0 1.3 1 0 0 1 1 1 1 Prefoldin subunit DUF3293 PF11697.8 RKO89263.1 - 0.08 13.4 0.1 0.11 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3293) Syja_N PF02383.18 RKO89264.1 - 4.9e-18 65.5 0.1 5.5e-18 65.3 0.1 1.1 1 0 0 1 1 1 1 SacI homology domain Prefoldin PF02996.17 RKO89264.1 - 0.019 14.9 0.3 0.031 14.2 0.3 1.3 1 0 0 1 1 1 0 Prefoldin subunit PQQ_2 PF13360.6 RKO89265.1 - 6.4e-14 52.1 0.0 0.0083 15.7 0.0 4.4 3 1 0 3 3 3 3 PQQ-like domain PepSY_TM PF03929.16 RKO89265.1 - 0.011 15.4 0.0 0.027 14.2 0.0 1.6 1 0 0 1 1 1 0 PepSY-associated TM region PQQ PF01011.21 RKO89265.1 - 0.088 12.8 4.9 15 5.7 0.1 4.4 5 0 0 5 5 5 0 PQQ enzyme repeat FANCI_S1 PF14675.6 RKO89266.1 - 7.2e-35 120.6 0.0 1.3e-34 119.8 0.0 1.3 1 0 0 1 1 1 1 FANCI solenoid 1 FANCI_S2 PF14676.6 RKO89266.1 - 2.2e-15 57.4 0.0 6.1e-15 55.9 0.0 1.8 1 0 0 1 1 1 1 FANCI solenoid 2 FANCI_HD1 PF14679.6 RKO89266.1 - 5.2e-14 52.0 0.1 1.8e-13 50.2 0.0 2.0 2 0 0 2 2 2 1 FANCI helical domain 1 DUF5130 PF17174.4 RKO89268.1 - 0.13 12.4 0.0 3.3 7.9 0.0 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF5130) NUDE_C PF04880.13 RKO89271.1 - 7.5 7.0 6.8 15 6.0 6.8 1.5 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region HEAT PF02985.22 RKO89272.1 - 1.9e-11 43.2 0.2 0.039 14.2 0.0 5.6 5 0 0 5 5 5 2 HEAT repeat Pkinase PF00069.25 RKO89272.1 - 1.4e-07 31.1 0.0 2.3e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO89272.1 - 2.9e-07 30.0 0.0 4.4e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Cnd1 PF12717.7 RKO89272.1 - 5.2e-07 29.8 0.0 1.1e-06 28.7 0.0 1.6 1 0 0 1 1 1 1 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 RKO89272.1 - 3.3e-06 27.4 0.0 0.00078 19.8 0.1 3.0 1 1 2 3 3 3 2 HEAT repeats Vac14_Fab1_bd PF12755.7 RKO89272.1 - 0.00043 20.8 0.0 2 9.0 0.0 3.3 2 1 1 3 3 3 1 Vacuolar 14 Fab1-binding region HEAT_EZ PF13513.6 RKO89272.1 - 0.00068 20.1 5.9 0.15 12.6 0.8 4.4 6 0 0 6 6 6 2 HEAT-like repeat Adaptin_N PF01602.20 RKO89272.1 - 0.0054 15.4 0.0 0.019 13.6 0.0 1.7 1 1 1 2 2 2 1 Adaptin N terminal region Kinase-like PF14531.6 RKO89272.1 - 0.16 11.3 0.0 0.26 10.5 0.0 1.3 1 0 0 1 1 1 0 Kinase-like Arrestin_N PF00339.29 RKO89273.1 - 0.054 13.5 0.0 0.084 12.9 0.0 1.3 1 0 0 1 1 1 0 Arrestin (or S-antigen), N-terminal domain Chalcone PF02431.15 RKO89273.1 - 0.13 11.6 0.0 0.3 10.5 0.0 1.5 2 0 0 2 2 2 0 Chalcone-flavanone isomerase RRM_1 PF00076.22 RKO89275.1 - 7.8e-36 121.7 0.1 1.6e-14 53.5 0.0 3.8 3 1 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 RKO89275.1 - 9.1e-05 22.5 0.0 0.0043 17.1 0.0 2.4 2 0 0 2 2 2 1 RNA recognition motif RRM_occluded PF16842.5 RKO89275.1 - 0.0006 19.6 0.0 0.1 12.5 0.0 3.1 3 1 0 3 3 3 1 Occluded RNA-recognition motif RRM_9 PF18444.1 RKO89275.1 - 0.04 13.8 0.0 0.11 12.4 0.0 1.7 2 0 0 2 2 2 0 RNA recognition motif DbpA PF03880.15 RKO89275.1 - 0.19 11.8 0.0 0.91 9.6 0.0 2.2 3 0 0 3 3 3 0 DbpA RNA binding domain DnaJ PF00226.31 RKO89276.1 - 2.9e-17 62.6 1.4 3.3e-17 62.4 1.4 1.0 1 0 0 1 1 1 1 DnaJ domain Phosphorylase PF00343.20 RKO89280.1 - 4.4e-277 921.1 0.0 6e-277 920.6 0.0 1.1 1 0 0 1 1 1 1 Carbohydrate phosphorylase BCIP PF13862.6 RKO89282.1 - 9.9e-09 35.3 0.6 1.3e-08 34.9 0.6 1.1 1 0 0 1 1 1 1 p21-C-terminal region-binding protein RRP7 PF12923.7 RKO89282.1 - 0.029 14.5 3.2 0.04 14.1 3.2 1.2 1 0 0 1 1 1 0 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain DUF4477 PF14780.6 RKO89283.1 - 3.9e-12 46.2 0.0 7.2e-12 45.3 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4477) DPBB_1 PF03330.18 RKO89285.1 - 0.0021 18.3 3.0 0.0038 17.5 0.2 2.8 2 1 0 2 2 2 1 Lytic transglycolase Cerato-platanin PF07249.12 RKO89285.1 - 0.057 13.5 1.2 0.084 13.0 0.1 1.8 2 0 0 2 2 2 0 Cerato-platanin RR_TM4-6 PF06459.12 RKO89285.1 - 0.88 9.3 5.2 1.3 8.8 5.2 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Ysc84 PF04366.12 RKO89287.1 - 2.2e-44 150.3 0.2 3.2e-44 149.8 0.2 1.2 1 0 0 1 1 1 1 Las17-binding protein actin regulator SH3_1 PF00018.28 RKO89287.1 - 1.2e-15 56.8 0.1 3.3e-15 55.4 0.0 1.8 2 0 0 2 2 2 1 SH3 domain SH3_9 PF14604.6 RKO89287.1 - 1.5e-11 44.0 0.1 2.6e-11 43.2 0.1 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_2 PF07653.17 RKO89287.1 - 5.7e-11 41.9 0.0 1.1e-10 41.0 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain Pex14_N PF04695.13 RKO89287.1 - 0.6 10.8 6.7 0.91 10.2 6.7 1.2 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region peroxidase PF00141.23 RKO89289.1 - 1.6e-10 41.1 0.0 2.6e-10 40.4 0.0 1.2 1 0 0 1 1 1 1 Peroxidase bZIP_1 PF00170.21 RKO89292.1 - 2.7e-09 37.0 7.3 3.7e-09 36.5 7.3 1.4 1 1 0 1 1 1 1 bZIP transcription factor DMPK_coil PF08826.10 RKO89292.1 - 5.5e-05 23.2 1.5 7.9e-05 22.7 1.3 1.5 1 1 0 1 1 1 1 DMPK coiled coil domain like bZIP_2 PF07716.15 RKO89292.1 - 0.013 15.5 9.4 0.044 13.9 9.4 1.8 1 1 0 1 1 1 0 Basic region leucine zipper ATPase PF06745.13 RKO89292.1 - 0.032 13.6 0.7 0.034 13.5 0.7 1.0 1 0 0 1 1 1 0 KaiC F-box-like PF12937.7 RKO89294.1 - 1.2e-07 31.5 0.6 1.2e-07 31.5 0.6 2.1 2 0 0 2 2 2 1 F-box-like F-box PF00646.33 RKO89294.1 - 0.0015 18.3 2.2 0.028 14.3 1.4 2.6 2 0 0 2 2 2 1 F-box domain Cadherin_3 PF16184.5 RKO89295.1 - 0.0038 17.2 0.0 0.0082 16.1 0.0 1.6 1 0 0 1 1 1 1 Cadherin-like BDV_P10 PF06515.11 RKO89295.1 - 4.7 7.3 7.5 19 5.4 7.5 2.0 1 0 0 1 1 1 0 Borna disease virus P10 protein WD40 PF00400.32 RKO89298.1 - 7.9e-27 93.0 15.8 1.5e-06 28.8 0.8 5.6 6 0 0 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO89298.1 - 6.1e-08 32.9 0.6 0.81 10.0 0.0 5.2 2 2 2 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO89298.1 - 1.4e-05 23.9 0.5 1 7.9 0.1 4.5 3 1 0 3 3 3 2 Nucleoporin Nup120/160 Cytochrom_D1 PF02239.16 RKO89298.1 - 2.1e-05 23.3 0.2 3.6e-05 22.5 0.1 1.5 1 1 0 1 1 1 1 Cytochrome D1 heme domain NUP214 PF16755.5 RKO89298.1 - 0.00012 21.4 0.0 0.00018 20.8 0.0 1.2 1 0 0 1 1 1 1 Nucleoporin or Nuclear pore complex subunit NUP214=Nup159 Nucleoporin_N PF08801.11 RKO89298.1 - 0.00071 18.4 0.5 0.76 8.5 0.1 4.1 1 1 2 3 3 3 2 Nup133 N terminal like PALB2_WD40 PF16756.5 RKO89298.1 - 0.0013 17.8 0.5 1.6 7.6 0.0 4.0 3 1 2 5 5 5 1 Partner and localizer of BRCA2 WD40 domain Ge1_WD40 PF16529.5 RKO89298.1 - 0.0049 15.9 0.9 2.2 7.1 0.0 3.2 2 2 1 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Hira PF07569.11 RKO89298.1 - 0.014 15.1 1.4 2.7 7.7 0.0 4.0 3 2 3 6 6 6 0 TUP1-like enhancer of split eIF2A PF08662.11 RKO89298.1 - 0.046 13.6 0.0 0.16 11.8 0.0 1.9 2 0 0 2 2 2 0 Eukaryotic translation initiation factor eIF2A Rabaptin PF03528.15 RKO89299.1 - 0.12 11.1 0.2 0.15 10.7 0.2 1.1 1 0 0 1 1 1 0 Rabaptin GHMP_kinases_N PF00288.26 RKO89301.1 - 2.1e-11 43.9 2.2 2.1e-11 43.9 2.2 2.0 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 RKO89301.1 - 2.5e-05 24.6 0.0 6.3e-05 23.3 0.0 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal DUF1490 PF07371.12 RKO89302.1 - 0.021 14.9 0.1 0.03 14.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1490) DUF4381 PF14316.6 RKO89305.1 - 0.65 10.2 3.4 1.3 9.2 3.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) UDG PF03167.19 RKO89306.1 - 6.2e-08 32.8 0.0 7.7e-08 32.5 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily DDE_Tnp_1_assoc PF13808.6 RKO89306.1 - 0.11 12.6 0.2 21 5.2 0.0 2.9 2 1 1 3 3 3 0 DDE_Tnp_1-associated DUF4195 PF13836.6 RKO89307.1 - 0.065 13.3 2.2 1.7 8.7 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4195) TRAUB PF08164.12 RKO89307.1 - 0.35 11.4 0.3 0.35 11.4 0.3 2.2 2 0 0 2 2 2 0 Apoptosis-antagonizing transcription factor, C-terminal Helicase_C PF00271.31 RKO89308.1 - 1.4e-16 60.8 0.1 1.8e-16 60.5 0.1 1.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Mito_fiss_reg PF05308.11 RKO89310.1 - 2.1 8.4 7.8 4.1 7.4 7.8 1.4 1 0 0 1 1 1 0 Mitochondrial fission regulator CAP_N PF01213.19 RKO89310.1 - 6.6 6.1 7.4 10 5.5 7.4 1.3 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal LisH PF08513.11 RKO89311.1 - 0.013 15.4 0.0 0.025 14.5 0.0 1.5 1 0 0 1 1 1 0 LisH RhoGAP PF00620.27 RKO89312.1 - 8.3e-38 129.6 0.0 1e-37 129.3 0.0 1.1 1 0 0 1 1 1 1 RhoGAP domain MogR_DNAbind PF12181.8 RKO89312.1 - 0.22 11.4 0.1 0.31 10.9 0.1 1.2 1 0 0 1 1 1 0 DNA binding domain of the motility gene repressor (MogR) BSP_II PF05432.11 RKO89314.1 - 0.0025 17.6 6.7 0.0044 16.8 6.7 1.3 1 0 0 1 1 1 1 Bone sialoprotein II (BSP-II) PBP1_TM PF14812.6 RKO89314.1 - 1.8 9.0 4.2 4.5 7.7 4.2 1.6 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal CENP-B_dimeris PF09026.10 RKO89314.1 - 3.4 8.1 15.5 7.4 7.0 15.5 1.4 1 0 0 1 1 1 0 Centromere protein B dimerisation domain RNase_Zc3h12a_2 PF14626.6 RKO89315.1 - 0.17 12.1 0.0 0.29 11.4 0.0 1.3 1 0 0 1 1 1 0 Zc3h12a-like Ribonuclease NYN domain START PF01852.19 RKO89316.1 - 0.085 12.2 0.0 0.097 12.1 0.0 1.2 1 0 0 1 1 1 0 START domain DUF5076 PF16826.5 RKO89316.1 - 0.098 12.6 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5076) DKCLD PF08068.12 RKO89319.1 - 4.6e-36 122.7 0.1 2.4e-33 114.0 0.1 2.6 2 0 0 2 2 2 2 DKCLD (NUC011) domain TruB_N PF01509.18 RKO89319.1 - 2.6e-24 86.3 0.1 2.6e-21 76.5 0.1 3.3 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 RKO89319.1 - 2.7e-22 78.7 1.1 5.4e-22 77.7 1.1 1.5 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain PUA PF01472.20 RKO89319.1 - 1.1e-17 63.7 0.5 2e-17 62.9 0.5 1.5 1 0 0 1 1 1 1 PUA domain Guanylate_cyc PF00211.20 RKO89320.1 - 1.1e-13 51.2 0.0 1.9e-08 34.1 0.0 2.2 2 0 0 2 2 2 2 Adenylate and Guanylate cyclase catalytic domain TPR_2 PF07719.17 RKO89321.1 - 0.0023 17.9 0.1 0.0067 16.4 0.1 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat AAA_16 PF13191.6 RKO89321.1 - 0.0044 17.4 1.5 0.016 15.6 0.3 2.3 2 0 0 2 2 2 1 AAA ATPase domain TPR_4 PF07721.14 RKO89321.1 - 0.032 14.8 0.5 0.1 13.3 0.5 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_12 PF13424.6 RKO89321.1 - 0.072 13.4 0.1 0.23 11.8 0.1 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.28 RKO89321.1 - 0.098 12.5 0.0 0.2 11.6 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO89321.1 - 0.15 12.8 1.9 0.22 12.2 0.0 2.2 3 0 0 3 3 3 0 Tetratricopeptide repeat Acyltransferase PF01553.21 RKO89322.1 - 1.6e-14 53.7 0.1 2.9e-14 52.9 0.1 1.4 1 0 0 1 1 1 1 Acyltransferase DUF1752 PF08550.10 RKO89322.1 - 0.00027 20.7 11.1 0.11 12.3 7.1 2.6 2 0 0 2 2 2 2 Fungal protein of unknown function (DUF1752) Ribosomal_L7Ae PF01248.26 RKO89324.1 - 0.0011 18.7 0.1 0.0014 18.3 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Trm112p PF03966.16 RKO89325.1 - 3.1e-17 62.9 0.1 4.9e-17 62.3 0.1 1.3 1 0 0 1 1 1 1 Trm112p-like protein Cytochrom_C550 PF14495.6 RKO89325.1 - 0.01 15.5 0.1 0.016 14.9 0.1 1.2 1 0 0 1 1 1 0 Cytochrome c-550 domain VIR_N PF15912.5 RKO89325.1 - 0.07 12.7 0.9 0.073 12.7 0.9 1.2 1 0 0 1 1 1 0 Virilizer, N-terminal Mito_fiss_reg PF05308.11 RKO89325.1 - 0.088 12.9 2.7 0.12 12.4 2.7 1.3 1 0 0 1 1 1 0 Mitochondrial fission regulator PRIMA1 PF16101.5 RKO89325.1 - 1.4 9.0 12.6 2.3 8.3 12.6 1.4 1 0 0 1 1 1 0 Proline-rich membrane anchor 1 Mito_carr PF00153.27 RKO89326.1 - 6.9e-48 160.5 0.0 4e-24 84.4 0.0 2.1 2 0 0 2 2 2 2 Mitochondrial carrier protein RCDG1 PF15725.5 RKO89327.1 - 5.8 7.4 10.3 26 5.3 1.5 3.3 2 0 0 2 2 2 0 Renal cancer differentiation gene 1 protein EF-hand_13 PF17958.1 RKO89329.1 - 3.1e-07 30.1 0.0 5.8e-07 29.2 0.0 1.4 1 0 0 1 1 1 1 EF-hand domain DUF1320 PF07030.12 RKO89330.1 - 0.034 14.3 0.0 0.064 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1320) DUF3721 PF12518.8 RKO89332.1 - 0.024 14.5 0.0 0.051 13.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function MOZART1 PF12554.8 RKO89333.1 - 2.6e-26 91.2 1.0 2.9e-26 91.0 1.0 1.0 1 0 0 1 1 1 1 Mitotic-spindle organizing gamma-tubulin ring associated Ank_2 PF12796.7 RKO89334.1 - 5.5e-07 30.1 0.2 1.3 9.6 0.1 4.0 2 1 1 4 4 4 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO89334.1 - 0.0002 21.6 4.6 27 5.2 0.1 5.8 4 2 2 6 6 6 0 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO89334.1 - 0.0019 18.7 5.4 17 6.1 0.2 5.5 3 1 3 6 6 6 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO89334.1 - 0.0033 17.8 1.1 19 6.2 0.0 4.8 6 0 0 6 6 6 1 Ankyrin repeat DUF3382 PF11862.8 RKO89334.1 - 0.19 12.0 0.0 0.54 10.6 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3382) RNA_pol_3_Rpc31 PF11705.8 RKO89334.1 - 0.72 10.1 4.9 0.46 10.7 3.0 1.5 1 1 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 EB1_binding PF05937.11 RKO89334.1 - 0.81 10.3 2.7 1.2 9.8 1.1 1.9 2 0 0 2 2 2 0 EB-1 Binding Domain Ank_4 PF13637.6 RKO89335.1 - 3.3e-07 30.7 0.0 0.046 14.3 0.0 3.6 2 2 0 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO89335.1 - 2.5e-06 27.7 0.2 0.0063 16.8 0.0 3.3 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO89335.1 - 6.9e-06 26.6 0.1 0.027 15.1 0.0 2.3 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO89335.1 - 0.017 15.6 0.1 43 5.2 0.0 4.5 5 0 0 5 5 5 0 Ankyrin repeat 3HCDH_RFF PF18321.1 RKO89335.1 - 0.032 14.7 0.6 0.12 12.8 0.3 2.2 1 1 1 2 2 2 0 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain Aconitase PF00330.20 RKO89336.1 - 1.4e-20 73.8 0.0 1.5e-20 73.6 0.0 1.0 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) TetR_C_24 PF17932.1 RKO89337.1 - 0.011 16.0 1.2 0.026 14.8 0.3 1.8 1 1 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain V-SNARE PF05008.15 RKO89337.1 - 0.011 16.1 3.4 0.016 15.6 3.4 1.3 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus Cytochrom_B562 PF07361.11 RKO89337.1 - 0.077 13.7 1.1 2.7 8.7 0.1 2.2 2 1 0 2 2 2 0 Cytochrome b562 Nucleotid_trans PF03407.16 RKO89338.1 - 4.2e-05 23.6 0.1 0.00019 21.5 0.1 2.1 1 1 0 1 1 1 1 Nucleotide-diphospho-sugar transferase PPR_2 PF13041.6 RKO89339.1 - 2.5e-10 40.4 0.3 0.0062 16.7 0.0 7.0 7 1 0 7 7 7 2 PPR repeat family PPR PF01535.20 RKO89339.1 - 3.9e-06 26.7 10.5 0.68 10.3 0.1 8.2 10 0 0 10 10 10 2 PPR repeat TPR_14 PF13428.6 RKO89339.1 - 1e-05 25.9 15.8 2.6 9.1 0.1 8.7 7 1 1 8 8 8 2 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 RKO89339.1 - 0.039 13.6 1.1 5.3 6.7 0.1 3.2 2 0 0 2 2 2 0 Bacterial type III secretion protein (HrpB1_HrpK) Vps39_1 PF10366.9 RKO89339.1 - 0.05 13.9 0.0 8.3 6.7 0.0 2.4 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 1 PPR_3 PF13812.6 RKO89339.1 - 0.1 12.7 0.0 1.1 9.4 0.0 2.9 4 0 0 4 4 4 0 Pentatricopeptide repeat domain TPR_2 PF07719.17 RKO89339.1 - 0.22 11.7 2.4 13 6.2 0.0 4.8 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO89339.1 - 4.2 8.1 7.9 15 6.3 0.0 4.3 4 0 0 4 4 4 0 Tetratricopeptide repeat XAP5 PF04921.14 RKO89342.1 - 2.3e-38 132.4 4.9 2.3e-38 132.4 4.9 2.7 1 1 1 2 2 2 1 XAP5, circadian clock regulator RuBisCO_small PF00101.20 RKO89342.1 - 0.032 14.2 1.6 0.036 14.1 0.3 1.7 2 0 0 2 2 2 0 Ribulose bisphosphate carboxylase, small chain BHD_2 PF10404.9 RKO89342.1 - 0.78 10.7 7.0 0.099 13.6 1.3 2.5 1 1 1 2 2 2 0 Rad4 beta-hairpin domain 2 DUF4604 PF15377.6 RKO89342.1 - 1.5 9.3 15.7 0.067 13.6 8.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4604) PIN_4 PF13638.6 RKO89343.1 - 1.1e-11 45.2 0.0 2.2e-11 44.2 0.0 1.5 1 1 0 1 1 1 1 PIN domain ECH_1 PF00378.20 RKO89344.1 - 7e-72 241.7 0.0 4e-60 203.2 0.0 2.0 2 0 0 2 2 2 2 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 RKO89344.1 - 5.8e-28 98.3 0.9 4.1e-16 59.4 0.6 3.0 2 1 1 3 3 3 3 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 RKO89344.1 - 0.015 15.2 0.0 0.085 12.8 0.0 2.0 2 0 0 2 2 2 0 Peptidase family S49 PH PF00169.29 RKO89346.1 - 0.0024 18.3 0.0 0.17 12.4 0.0 2.8 2 0 0 2 2 2 1 PH domain 7tm_3 PF00003.22 RKO89347.1 - 8.2e-12 45.3 9.4 1.3e-11 44.7 9.4 1.2 1 0 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR tRNA-synt_2d PF01409.20 RKO89348.1 - 9.2e-91 303.7 0.0 1.1e-90 303.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 RKO89348.1 - 2.4e-09 36.9 0.0 7.5e-07 28.8 0.0 2.1 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2 PF00152.20 RKO89348.1 - 0.004 16.3 0.0 0.011 14.8 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetases class II (D, K and N) CX9C PF16860.5 RKO89350.1 - 1.9e-21 75.8 8.0 6.4e-14 51.7 1.1 2.1 2 0 0 2 2 2 2 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, CHCH PF06747.13 RKO89350.1 - 2.5e-09 37.0 1.2 6e-06 26.2 0.1 2.9 2 1 0 2 2 2 2 CHCH domain Cmc1 PF08583.10 RKO89350.1 - 2.4e-05 24.2 11.7 0.2 11.7 2.5 3.0 1 1 2 3 3 3 3 Cytochrome c oxidase biogenesis protein Cmc1 like MTCP1 PF08991.10 RKO89350.1 - 7.2e-05 22.9 1.7 7.2e-05 22.9 1.7 2.2 1 1 1 2 2 2 1 Mature-T-Cell Proliferation I type Pet191_N PF10203.9 RKO89350.1 - 0.013 15.8 9.2 2.2 8.6 6.0 2.7 1 1 2 3 3 3 0 Cytochrome c oxidase assembly protein PET191 MCCD1 PF15707.5 RKO89350.1 - 0.026 15.0 0.4 0.044 14.2 0.0 1.7 2 0 0 2 2 2 0 Mitochondrial coiled-coil domain protein 1 NDUF_B7 PF05676.13 RKO89350.1 - 0.05 13.3 9.4 0.085 12.6 2.0 2.2 1 1 1 2 2 2 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) COX6B PF02297.17 RKO89350.1 - 0.058 13.6 7.3 1.6 9.1 0.7 2.3 1 1 1 2 2 2 0 Cytochrome oxidase c subunit VIb GCK PF07802.11 RKO89350.1 - 0.12 12.8 6.4 0.56 10.7 0.4 2.4 1 1 1 2 2 2 0 GCK domain COX17 PF05051.13 RKO89350.1 - 0.47 10.8 8.5 0.43 11.0 0.9 3.3 2 1 1 3 3 3 0 Cytochrome C oxidase copper chaperone (COX17) Peptidase_M16 PF00675.20 RKO89351.1 - 8.4e-12 45.3 0.0 1.7e-11 44.3 0.0 1.5 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 RKO89351.1 - 2.8e-11 43.7 0.0 5.3e-11 42.9 0.0 1.5 1 0 0 1 1 1 1 Peptidase M16 inactive domain DUF4630 PF15443.6 RKO89351.1 - 2.7 8.1 6.3 1.9 8.7 0.2 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4630) FAP PF07174.11 RKO89352.1 - 0.025 14.0 30.6 2.2 7.6 30.6 2.3 1 1 0 1 1 1 0 Fibronectin-attachment protein (FAP) Gpr1_Fun34_YaaH PF01184.19 RKO89355.1 - 1.6e-28 99.7 7.3 1.8e-28 99.6 7.3 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family DUF2393 PF09624.10 RKO89355.1 - 0.37 10.8 3.7 0.54 10.2 3.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) Gpr1_Fun34_YaaH PF01184.19 RKO89357.1 - 8.3e-36 123.5 6.3 9.2e-36 123.4 6.3 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family Keratin PF02422.16 RKO89357.1 - 0.028 14.1 0.5 0.043 13.5 0.5 1.3 1 0 0 1 1 1 0 Keratin DUF2279 PF10043.9 RKO89358.1 - 0.13 13.0 0.3 17 6.3 0.1 2.5 1 1 1 2 2 2 0 Predicted periplasmic lipoprotein (DUF2279) zf-C4H2 PF10146.9 RKO89358.1 - 0.6 10.4 4.6 1.2 9.4 4.6 1.5 1 1 0 1 1 1 0 Zinc finger-containing protein NST1 PF13945.6 RKO89359.1 - 0.00091 19.4 6.5 0.044 13.9 1.5 2.1 2 0 0 2 2 2 2 Salt tolerance down-regulator PGA2 PF07543.12 RKO89359.1 - 0.024 14.6 10.9 0.037 14.0 10.9 1.4 1 0 0 1 1 1 0 Protein trafficking PGA2 DUF4670 PF15709.5 RKO89359.1 - 0.027 13.8 8.1 0.034 13.5 8.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4670) UPF0239 PF06783.11 RKO89359.1 - 0.057 13.6 10.5 0.054 13.7 3.4 2.3 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0239) RR_TM4-6 PF06459.12 RKO89359.1 - 0.26 11.1 7.9 0.29 10.9 7.9 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 PBP1_TM PF14812.6 RKO89359.1 - 0.36 11.2 15.5 2.5 8.5 7.9 2.3 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DUF1387 PF07139.11 RKO89359.1 - 0.49 10.1 11.0 0.3 10.8 1.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1387) DUF4710 PF15828.5 RKO89359.1 - 0.84 9.8 11.9 5.7 7.1 4.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4710) CDC45 PF02724.14 RKO89359.1 - 1.4 7.1 11.1 2 6.6 11.1 1.2 1 0 0 1 1 1 0 CDC45-like protein Presenilin PF01080.17 RKO89359.1 - 2 7.1 3.1 2.1 7.0 3.1 1.1 1 0 0 1 1 1 0 Presenilin DUF1754 PF08555.10 RKO89359.1 - 3.8 8.4 29.1 0.43 11.4 8.8 2.2 1 1 1 2 2 2 0 Eukaryotic family of unknown function (DUF1754) DUF3381 PF11861.8 RKO89359.1 - 4.2 7.1 17.5 8.8 6.1 2.2 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3381) SRP-alpha_N PF04086.13 RKO89359.1 - 4.3 7.2 15.5 5.4 6.8 15.5 1.1 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal PCM1_C PF15717.5 RKO89359.1 - 4.3 5.9 11.2 5.5 5.6 11.2 1.1 1 0 0 1 1 1 0 Pericentriolar material 1 C terminus CENP-B_dimeris PF09026.10 RKO89359.1 - 5.3 7.5 10.7 0.66 10.4 5.3 2.0 2 0 0 2 2 2 0 Centromere protein B dimerisation domain Cadherin_tail PF15974.5 RKO89359.1 - 7.5 6.9 13.9 6 7.2 1.2 2.4 2 0 0 2 2 2 0 Cadherin C-terminal cytoplasmic tail, catenin-binding region Hid1 PF12722.7 RKO89359.1 - 7.7 4.5 7.2 8.7 4.3 7.2 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein NKAP PF15692.5 RKO89359.1 - 9.4 7.0 14.6 9.3 7.1 5.5 2.2 2 0 0 2 2 2 0 NF-kappa-B-activating protein DIM1 PF02966.16 RKO89360.1 - 2.7e-29 101.6 0.0 2.9e-29 101.5 0.0 1.0 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin PF00085.20 RKO89360.1 - 0.001 19.0 0.0 0.0011 18.9 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 RKO89360.1 - 0.017 15.4 0.0 0.023 15.0 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like Thioredoxin_7 PF13899.6 RKO89360.1 - 0.032 14.4 0.0 0.033 14.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like Chromo PF00385.24 RKO89364.1 - 1e-07 31.7 0.0 2e-07 30.8 0.0 1.5 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain Glyco_hydro_1 PF00232.18 RKO89365.1 - 2e-141 471.5 0.0 2.5e-141 471.2 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 1 PDZ_1 PF12812.7 RKO89366.1 - 3.9e-13 49.2 0.0 5.5e-13 48.7 0.0 1.2 1 0 0 1 1 1 1 PDZ-like domain PDZ_6 PF17820.1 RKO89366.1 - 3.9e-06 26.6 0.0 9.5e-06 25.4 0.0 1.6 2 0 0 2 2 2 1 PDZ domain PDZ_2 PF13180.6 RKO89366.1 - 0.0027 18.0 0.0 0.0038 17.5 0.0 1.2 1 0 0 1 1 1 1 PDZ domain PDZ_3 PF17815.1 RKO89366.1 - 0.031 14.2 0.0 0.075 12.9 0.0 1.4 1 1 0 1 1 1 0 PDZ domain PDZ_1 PF12812.7 RKO89367.1 - 8.8e-29 99.4 0.0 2e-28 98.2 0.0 1.7 1 0 0 1 1 1 1 PDZ-like domain Trypsin_2 PF13365.6 RKO89367.1 - 2.3e-08 35.1 0.2 0.00013 22.9 0.0 2.4 2 0 0 2 2 2 2 Trypsin-like peptidase domain PDZ_6 PF17820.1 RKO89367.1 - 2.4e-07 30.5 0.0 2.9e-06 27.0 0.0 2.4 2 0 0 2 2 2 1 PDZ domain PDZ_2 PF13180.6 RKO89367.1 - 1e-06 29.0 0.1 3.4e-06 27.3 0.0 1.9 2 0 0 2 2 2 1 PDZ domain PDZ PF00595.24 RKO89367.1 - 3.5e-06 27.3 0.0 4.1e-05 23.8 0.0 2.4 2 0 0 2 2 2 1 PDZ domain Tricorn_PDZ PF14685.6 RKO89367.1 - 0.0033 17.3 0.0 0.021 14.8 0.0 2.1 2 0 0 2 2 2 1 Tricorn protease PDZ domain Peptidase_S7 PF00949.21 RKO89367.1 - 0.018 14.9 0.1 0.041 13.7 0.1 1.6 1 0 0 1 1 1 0 Peptidase S7, Flavivirus NS3 serine protease Peptidase_S46 PF10459.9 RKO89367.1 - 0.041 12.5 0.0 0.058 12.0 0.0 1.1 1 0 0 1 1 1 0 Peptidase S46 DUF31 PF01732.16 RKO89367.1 - 0.05 13.1 0.3 0.068 12.7 0.3 1.1 1 0 0 1 1 1 0 Putative peptidase (DUF31) PPR_2 PF13041.6 RKO89368.1 - 2.5e-10 40.4 0.0 2.7e-06 27.5 0.0 5.6 6 0 0 6 6 6 1 PPR repeat family PPR_3 PF13812.6 RKO89368.1 - 6.8e-09 35.7 0.0 1.1e-06 28.6 0.1 4.3 6 0 0 6 6 6 1 Pentatricopeptide repeat domain PPR PF01535.20 RKO89368.1 - 3.4e-05 23.8 0.2 0.032 14.5 0.0 4.8 5 0 0 5 5 5 1 PPR repeat DUF2291 PF10054.9 RKO89368.1 - 0.12 12.0 0.5 5.5 6.7 0.0 3.1 3 0 0 3 3 3 0 Predicted periplasmic lipoprotein (DUF2291) DUF2459 PF09601.10 RKO89369.1 - 0.031 14.1 0.0 0.035 13.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2459) GRP PF07172.11 RKO89370.1 - 1.1 10.0 20.0 1.8 9.3 20.0 1.2 1 0 0 1 1 1 0 Glycine rich protein family API5 PF05918.11 RKO89370.1 - 1.3 7.7 4.4 1.8 7.3 4.4 1.1 1 0 0 1 1 1 0 Apoptosis inhibitory protein 5 (API5) Acetyltransf_1 PF00583.25 RKO89372.1 - 1.6e-11 44.4 0.0 2e-11 44.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 RKO89372.1 - 3.1e-09 36.9 0.1 3.8e-09 36.6 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 RKO89372.1 - 3.7e-06 27.3 0.0 5.6e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 RKO89372.1 - 0.00027 20.8 0.1 0.00053 19.9 0.1 1.5 1 1 1 2 2 2 1 FR47-like protein Acetyltransf_15 PF17013.5 RKO89372.1 - 0.014 14.9 0.3 0.041 13.4 0.0 1.8 2 1 1 3 3 3 0 Putative acetyl-transferase PanZ PF12568.8 RKO89372.1 - 0.061 13.1 0.0 0.071 12.8 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ eIF2_C PF09173.11 RKO89375.1 - 9.4e-37 125.2 0.4 2.4e-36 123.8 0.4 1.7 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU PF00009.27 RKO89375.1 - 4.7e-23 81.8 0.2 3.6e-22 78.8 0.2 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 RKO89375.1 - 9.6e-09 35.5 1.4 2.1e-08 34.5 0.2 2.2 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 RKO89375.1 - 0.0049 16.9 0.0 0.011 15.9 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase MMR_HSR1_Xtn PF16897.5 RKO89375.1 - 0.01 15.8 0.2 0.022 14.7 0.2 1.5 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain RsgA_GTPase PF03193.16 RKO89375.1 - 0.014 15.3 0.2 0.19 11.6 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase PduV-EutP PF10662.9 RKO89375.1 - 0.034 13.9 0.9 0.79 9.5 0.1 2.6 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation Dynamin_N PF00350.23 RKO89375.1 - 0.14 12.2 0.0 0.51 10.4 0.0 1.9 2 0 0 2 2 2 0 Dynamin family RRN3 PF05327.11 RKO89376.1 - 1.4e-142 476.1 0.0 1.6e-142 476.0 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase I specific transcription initiation factor RRN3 POP1 PF06978.11 RKO89377.1 - 1.7e-41 142.5 21.4 7.7e-21 75.0 3.7 2.2 1 1 1 2 2 2 2 Ribonucleases P/MRP protein subunit POP1 POPLD PF08170.12 RKO89377.1 - 2e-32 111.4 0.1 2e-32 111.4 0.1 2.0 2 0 0 2 2 2 1 POPLD (NUC188) domain GCV_T PF01571.21 RKO89377.1 - 2.6e-06 27.0 0.0 0.041 13.2 0.0 3.1 3 0 0 3 3 3 2 Aminomethyltransferase folate-binding domain Fungal_trans PF04082.18 RKO89378.1 - 1.1e-06 27.9 0.0 1.9e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Fungal specific transcription factor domain SWIRM PF04433.17 RKO89379.1 - 4.3e-06 27.0 0.0 7.6e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 SWIRM domain LIM PF00412.22 RKO89381.1 - 8.3e-12 45.2 1.4 2.1e-11 43.9 1.4 1.7 1 0 0 1 1 1 1 LIM domain ZapB PF06005.12 RKO89382.1 - 0.92 10.0 4.0 1.3 9.5 0.8 2.2 1 1 1 2 2 2 0 Cell division protein ZapB NYD-SP28_assoc PF14775.6 RKO89382.1 - 1.2 9.3 4.4 0.36 11.0 1.3 1.7 2 0 0 2 2 2 0 Sperm tail C-terminal domain Nsp1_C PF05064.13 RKO89383.1 - 1.5e-27 95.7 3.6 1.5e-27 95.7 3.6 2.0 2 0 0 2 2 2 1 Nsp1-like C-terminal region DUF948 PF06103.11 RKO89383.1 - 0.00012 22.2 4.1 0.0034 17.6 0.1 3.2 3 1 1 4 4 4 1 Bacterial protein of unknown function (DUF948) ING PF12998.7 RKO89383.1 - 0.0007 20.1 1.3 0.004 17.7 0.3 2.5 2 1 1 3 3 3 1 Inhibitor of growth proteins N-terminal histone-binding APG17 PF04108.12 RKO89383.1 - 0.0018 17.5 1.6 0.0018 17.5 1.6 2.0 2 1 0 2 2 2 1 Autophagy protein Apg17 Med30 PF11315.8 RKO89383.1 - 0.0024 18.1 2.7 0.011 15.9 2.7 2.0 1 1 0 1 1 1 1 Mediator complex subunit 30 Terpene_synth_C PF03936.16 RKO89383.1 - 0.0034 16.8 0.2 0.006 16.0 0.2 1.3 1 0 0 1 1 1 1 Terpene synthase family, metal binding domain NPV_P10 PF05531.12 RKO89383.1 - 0.0051 17.2 5.4 0.86 10.1 0.1 3.0 3 0 0 3 3 3 2 Nucleopolyhedrovirus P10 protein CdvA PF18822.1 RKO89383.1 - 0.0055 16.5 3.7 1.1 9.1 0.8 2.7 2 0 0 2 2 2 1 CdvA-like coiled-coil domain FerA PF08165.11 RKO89383.1 - 0.0089 16.0 2.3 0.94 9.5 0.1 3.4 3 0 0 3 3 3 1 FerA (NUC095) domain Laminin_II PF06009.12 RKO89383.1 - 0.021 14.8 5.7 0.6 10.1 1.0 2.3 2 0 0 2 2 2 0 Laminin Domain II ANAPC4 PF12896.7 RKO89383.1 - 0.04 13.4 0.4 0.12 11.9 0.4 1.9 1 1 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 4 DUF327 PF03885.13 RKO89383.1 - 0.044 13.7 2.0 0.11 12.4 2.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF327) ERM PF00769.19 RKO89383.1 - 0.057 13.2 4.8 0.13 12.0 4.8 1.6 1 1 0 1 1 1 0 Ezrin/radixin/moesin family DUF4254 PF14063.6 RKO89383.1 - 0.064 13.1 6.7 0.45 10.3 0.1 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF4254) LidA_Long_CC PF18641.1 RKO89383.1 - 0.066 13.3 5.2 0.049 13.7 1.5 2.5 2 1 0 3 3 3 0 LidA long coiled-coil domain DUF2935 PF11155.8 RKO89383.1 - 0.071 13.4 0.0 0.85 10.0 0.0 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) GvpK PF05121.12 RKO89383.1 - 0.071 13.2 2.4 0.41 10.7 0.5 2.5 2 0 0 2 2 2 0 Gas vesicle protein K XhlA PF10779.9 RKO89383.1 - 0.096 12.9 10.9 3.5 7.9 2.8 3.5 3 1 1 4 4 3 0 Haemolysin XhlA Apolipoprotein PF01442.18 RKO89383.1 - 0.11 12.4 8.5 0.18 11.7 5.4 2.8 1 1 1 2 2 2 0 Apolipoprotein A1/A4/E domain Occludin_ELL PF07303.13 RKO89383.1 - 0.14 12.9 3.4 1.1 10.1 1.2 2.6 2 2 0 2 2 2 0 Occludin homology domain Baculo_PEP_C PF04513.12 RKO89383.1 - 0.15 12.1 11.0 2.4 8.2 1.6 2.8 2 2 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4407 PF14362.6 RKO89383.1 - 0.22 10.9 7.7 0.39 10.0 7.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) Lipoprotein_20 PF13942.6 RKO89383.1 - 0.32 10.9 5.0 1.2 9.0 1.6 2.3 2 0 0 2 2 2 0 YfhG lipoprotein bZIP_1 PF00170.21 RKO89383.1 - 0.33 11.1 6.5 3.5 7.8 0.9 3.1 4 0 0 4 4 3 0 bZIP transcription factor FliD_N PF02465.18 RKO89383.1 - 0.4 11.4 6.1 2.4 8.9 0.9 2.8 2 1 1 3 3 2 0 Flagellar hook-associated protein 2 N-terminus HAUS6_N PF14661.6 RKO89383.1 - 0.47 10.0 3.2 0.7 9.4 2.7 1.7 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus Syntaxin_2 PF14523.6 RKO89383.1 - 0.47 10.8 6.6 9.9 6.6 5.6 2.5 1 1 1 2 2 2 0 Syntaxin-like protein DUF1664 PF07889.12 RKO89383.1 - 0.48 10.5 4.8 9 6.4 1.1 2.8 2 2 0 2 2 2 0 Protein of unknown function (DUF1664) DUF724 PF05266.14 RKO89383.1 - 0.68 9.7 3.9 0.71 9.7 1.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF724) BLOC1_2 PF10046.9 RKO89383.1 - 1.1 9.6 12.0 31 5.0 0.2 3.9 3 1 1 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 UPF0184 PF03670.13 RKO89383.1 - 1.2 9.6 11.5 0.42 11.0 0.3 3.2 1 1 3 4 4 4 0 Uncharacterised protein family (UPF0184) MbeD_MobD PF04899.12 RKO89383.1 - 1.3 9.2 5.8 1.3 9.2 0.1 3.1 3 1 1 4 4 4 0 MbeD/MobD like Fib_alpha PF08702.10 RKO89383.1 - 1.3 9.2 5.5 7.6 6.7 1.6 2.5 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family FlaC_arch PF05377.11 RKO89383.1 - 1.4 9.4 5.4 14 6.1 1.2 3.7 4 1 0 4 4 3 0 Flagella accessory protein C (FlaC) Sec34 PF04136.15 RKO89383.1 - 1.4 8.8 8.7 1.4 8.8 2.6 2.7 2 2 0 2 2 2 0 Sec34-like family BRE1 PF08647.11 RKO89383.1 - 1.4 9.0 9.5 0.31 11.1 3.6 2.3 2 1 1 3 3 2 0 BRE1 E3 ubiquitin ligase CLZ PF16526.5 RKO89383.1 - 1.8 9.0 9.9 1.2 9.5 0.3 3.4 3 1 1 4 4 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels CC2-LZ PF16516.5 RKO89383.1 - 3.2 8.2 8.1 16 5.9 1.1 3.2 2 1 0 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Snapin_Pallidin PF14712.6 RKO89383.1 - 3.9 8.0 9.9 9.3 6.8 1.6 3.5 3 1 1 4 4 4 0 Snapin/Pallidin FoP_duplication PF13865.6 RKO89383.1 - 4 8.1 9.1 4.4 7.9 0.1 3.2 3 1 0 3 3 2 0 C-terminal duplication domain of Friend of PRMT1 RRF PF01765.19 RKO89383.1 - 5.4 6.9 6.5 1.2 9.1 0.5 2.4 3 0 0 3 3 2 0 Ribosome recycling factor APG6_N PF17675.1 RKO89383.1 - 6 7.4 15.6 1.6 9.3 6.4 2.6 2 1 0 2 2 2 0 Apg6 coiled-coil region TolA_bind_tri PF16331.5 RKO89383.1 - 6.1 7.0 9.6 15 5.8 2.3 3.0 3 0 0 3 3 3 0 TolA binding protein trimerisation KIP1 PF07765.12 RKO89383.1 - 7.5 6.8 8.3 31 4.8 0.1 3.3 3 1 1 4 4 3 0 KIP1-like protein Nop14 PF04147.12 RKO89385.1 - 0.73 8.0 9.9 1.4 7.1 9.9 1.3 1 0 0 1 1 1 0 Nop14-like family TIP120 PF08623.10 RKO89386.1 - 3.9e-54 182.9 4.1 8.2e-52 175.4 0.1 3.8 3 0 0 3 3 3 1 TATA-binding protein interacting (TIP20) HEAT_EZ PF13513.6 RKO89386.1 - 8.1e-19 67.7 18.6 0.0004 20.8 0.0 10.9 8 2 2 10 10 10 4 HEAT-like repeat HEAT_2 PF13646.6 RKO89386.1 - 2.5e-17 63.0 18.1 0.00071 19.9 0.2 9.2 8 1 0 9 9 9 3 HEAT repeats HEAT PF02985.22 RKO89386.1 - 2.2e-16 58.5 12.3 0.0033 17.6 0.0 11.5 11 0 0 11 11 10 3 HEAT repeat Cnd1 PF12717.7 RKO89386.1 - 1.9e-14 54.0 13.7 0.00012 22.1 4.3 7.3 6 2 1 7 7 6 3 non-SMC mitotic condensation complex subunit 1 Arm PF00514.23 RKO89386.1 - 4.2e-10 39.3 7.1 0.13 12.4 0.0 7.9 8 0 0 8 8 6 2 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.20 RKO89386.1 - 3.6e-09 35.7 16.7 0.00029 19.5 3.3 7.2 5 2 1 7 7 7 2 Adaptin N terminal region Proteasom_PSMB PF10508.9 RKO89386.1 - 1.3e-06 27.2 4.1 1.3e-06 27.2 4.1 4.0 5 0 0 5 5 5 1 Proteasome non-ATPase 26S subunit MMS19_N PF14500.6 RKO89386.1 - 1.6e-06 27.9 4.6 0.43 10.1 0.0 6.1 4 1 0 5 5 5 1 Dos2-interacting transcription regulator of RNA-Pol-II Vac14_Fab1_bd PF12755.7 RKO89386.1 - 4.4e-06 27.2 0.4 0.2 12.3 0.1 6.9 6 1 2 8 8 7 1 Vacuolar 14 Fab1-binding region Telomere_reg-2 PF10193.9 RKO89386.1 - 7.1e-05 23.2 7.4 0.16 12.4 0.6 5.3 4 0 0 4 4 4 1 Telomere length regulation protein V-ATPase_H_C PF11698.8 RKO89386.1 - 0.00017 21.7 10.8 0.074 13.2 0.8 5.3 6 1 1 7 7 5 2 V-ATPase subunit H Cnd3 PF12719.7 RKO89386.1 - 0.00024 20.4 8.0 0.081 12.1 1.6 4.6 3 1 1 4 4 4 1 Nuclear condensing complex subunits, C-term domain TAF6_C PF07571.13 RKO89386.1 - 0.0013 19.0 1.9 4 7.8 0.0 5.2 5 1 0 5 5 4 1 TAF6 C-terminal HEAT repeat domain CLASP_N PF12348.8 RKO89386.1 - 0.0015 18.2 6.1 7.4 6.1 0.8 6.6 7 1 2 9 9 8 0 CLASP N terminal ParcG PF10274.9 RKO89386.1 - 0.0019 18.3 18.6 0.24 11.5 0.9 6.2 5 1 2 7 7 7 2 Parkin co-regulated protein SDA1 PF05285.12 RKO89386.1 - 0.0021 17.6 0.7 0.0033 16.9 0.7 1.2 1 0 0 1 1 1 1 SDA1 DUF3385 PF11865.8 RKO89386.1 - 0.0067 16.3 7.8 19 5.2 0.6 5.9 4 2 1 5 5 5 0 Domain of unknown function (DUF3385) RTP1_C1 PF10363.9 RKO89386.1 - 0.0071 16.5 0.6 0.0071 16.5 0.6 5.8 6 1 0 6 6 4 1 Required for nuclear transport of RNA pol II C-terminus 1 MIF4G PF02854.19 RKO89386.1 - 0.01 15.5 4.3 0.9 9.1 1.5 3.5 2 1 1 3 3 3 0 MIF4G domain UME PF08064.13 RKO89386.1 - 0.011 15.6 8.2 6.5 6.7 1.2 6.3 6 1 0 6 6 6 0 UME (NUC010) domain MMS19_C PF12460.8 RKO89386.1 - 0.019 14.1 38.2 0.17 11.0 1.8 7.8 7 2 0 7 7 7 0 RNAPII transcription regulator C-terminal RasGEF_N_2 PF14663.6 RKO89386.1 - 0.021 15.2 2.4 3.6 8.0 0.1 4.5 4 0 0 4 4 3 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain BACK PF07707.15 RKO89386.1 - 0.037 14.1 0.3 0.14 12.2 0.3 2.0 1 0 0 1 1 1 0 BTB And C-terminal Kelch MOR2-PAG1_N PF14222.6 RKO89386.1 - 0.14 11.1 8.9 0.03 13.3 1.0 3.0 4 0 0 4 4 3 0 Cell morphogenesis N-terminal CDC45 PF02724.14 RKO89386.1 - 0.23 9.7 3.6 0.36 9.1 3.6 1.2 1 0 0 1 1 1 0 CDC45-like protein DUF3361 PF11841.8 RKO89386.1 - 0.23 11.4 12.0 3 7.7 0.5 5.7 5 1 1 6 6 6 0 Domain of unknown function (DUF3361) DUF3535 PF12054.8 RKO89386.1 - 0.29 10.3 8.7 0.025 13.8 1.8 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF3535) FAM176 PF14851.6 RKO89386.1 - 0.36 10.5 2.2 0.79 9.4 2.2 1.5 1 0 0 1 1 1 0 FAM176 family Ipi1_N PF12333.8 RKO89386.1 - 0.47 11.1 4.3 11 6.6 0.1 4.3 3 1 0 4 4 3 0 Rix1 complex component involved in 60S ribosome maturation TFIIA PF03153.13 RKO89386.1 - 0.47 10.4 4.3 0.88 9.5 4.3 1.4 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF4042 PF13251.6 RKO89386.1 - 0.57 9.9 10.6 12 5.5 0.0 5.9 6 1 1 7 7 5 0 Domain of unknown function (DUF4042) Sigma70_ner PF04546.13 RKO89386.1 - 0.64 9.9 5.9 2 8.3 5.9 1.8 1 0 0 1 1 1 0 Sigma-70, non-essential region VHS PF00790.19 RKO89386.1 - 0.99 9.2 4.0 12 5.7 1.6 3.3 2 1 1 3 3 3 0 VHS domain DUF5578 PF17741.1 RKO89386.1 - 1.1 8.7 6.7 3.9 6.8 0.4 3.9 1 1 1 3 3 3 0 Family of unknown function (DUF5578) BUD22 PF09073.10 RKO89386.1 - 2 7.7 6.2 3.4 6.9 6.2 1.3 1 0 0 1 1 1 0 BUD22 DNA_pol_phi PF04931.13 RKO89386.1 - 3 5.8 33.6 0.62 8.1 5.9 2.6 2 0 0 2 2 2 0 DNA polymerase phi YmgB PF10798.8 RKO89386.1 - 3.4 7.5 6.8 8.9 6.2 0.5 3.9 4 0 0 4 4 4 0 Biofilm development protein YmgB/AriR TRAP_alpha PF03896.16 RKO89386.1 - 5 6.3 6.0 8.2 5.5 6.0 1.2 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit CobT PF06213.12 RKO89386.1 - 5.5 6.3 12.2 8.3 5.7 8.6 2.4 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT RRN3 PF05327.11 RKO89386.1 - 5.7 5.3 21.8 0.12 10.9 9.0 3.2 3 1 1 4 4 4 0 RNA polymerase I specific transcription initiation factor RRN3 Ank_4 PF13637.6 RKO89389.1 - 0.038 14.6 0.3 1.1 9.9 0.2 3.1 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Lipase_GDSL_2 PF13472.6 RKO89390.1 - 3.5e-06 27.5 0.0 7.2e-06 26.5 0.0 1.5 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family RT_RNaseH_2 PF17919.1 RKO89391.1 - 6.9e-12 45.3 0.0 1.3e-11 44.4 0.0 1.4 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase Integrase_H2C2 PF17921.1 RKO89391.1 - 2.2e-10 40.5 0.0 3.8e-10 39.7 0.0 1.4 1 0 0 1 1 1 1 Integrase zinc binding domain RT_RNaseH PF17917.1 RKO89391.1 - 7.2e-05 23.0 0.0 0.00018 21.8 0.0 1.6 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase HhH-GPD PF00730.25 RKO89392.1 - 3.8e-16 59.5 0.0 4.9e-16 59.1 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein ChaC PF04752.12 RKO89392.1 - 0.004 17.2 0.0 0.0062 16.6 0.0 1.2 1 0 0 1 1 1 1 ChaC-like protein TetR_C_1 PF02909.17 RKO89392.1 - 0.073 12.9 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Pkinase PF00069.25 RKO89393.1 - 1.6e-32 113.0 0.0 6.5e-32 110.9 0.0 1.8 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO89393.1 - 1e-20 74.1 0.0 3.5e-19 69.1 0.0 2.1 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO89393.1 - 8.6e-05 22.0 0.0 0.00015 21.2 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 RKO89393.1 - 0.0075 15.6 0.0 0.012 14.9 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 RKO89393.1 - 0.17 11.8 0.1 0.77 9.6 0.1 1.8 1 1 0 2 2 2 0 Phosphotransferase enzyme family FAM177 PF14774.6 RKO89394.1 - 0.0074 16.7 0.0 0.021 15.2 0.0 1.7 1 0 0 1 1 1 1 FAM177 family Ribosomal_L16 PF00252.18 RKO89398.1 - 5.3e-34 117.1 0.0 5.9e-34 116.9 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Anp1 PF03452.14 RKO89399.1 - 6.9e-19 68.3 0.0 1e-18 67.7 0.0 1.2 1 0 0 1 1 1 1 Anp1 Ank_5 PF13857.6 RKO89400.1 - 0.012 16.0 0.0 0.52 10.7 0.0 2.4 2 0 0 2 2 2 0 Ankyrin repeats (many copies) DUF5597 PF18120.1 RKO89402.1 - 0.0024 18.0 0.0 0.0068 16.5 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF5597) NifZ PF04319.13 RKO89402.1 - 0.087 12.6 0.1 0.3 10.9 0.1 1.9 2 0 0 2 2 2 0 NifZ domain Tyrosinase PF00264.20 RKO89403.1 - 4.3e-14 53.3 11.8 1e-13 52.1 11.8 1.6 1 1 0 1 1 1 1 Common central domain of tyrosinase adh_short_C2 PF13561.6 RKO89404.1 - 2.1e-59 200.9 7.5 2.5e-59 200.7 7.5 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO89404.1 - 5.3e-46 156.5 4.9 6.7e-46 156.2 4.9 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 RKO89404.1 - 2.1e-15 57.1 3.4 3.4e-15 56.4 3.4 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 RKO89404.1 - 5.9e-06 25.9 1.1 3e-05 23.6 1.0 1.9 1 1 1 2 2 2 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 RKO89404.1 - 0.0087 15.2 0.0 0.013 14.7 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein THF_DHG_CYH_C PF02882.19 RKO89404.1 - 0.046 13.0 0.5 0.071 12.4 0.5 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Ank_2 PF12796.7 RKO89405.1 - 8.4e-14 51.9 1.1 8.7e-05 23.0 0.1 5.1 1 1 6 7 7 7 6 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO89405.1 - 1.4e-13 51.1 10.9 0.11 13.1 0.0 8.0 5 3 3 8 8 8 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO89405.1 - 3.8e-06 27.1 10.4 3.3 8.2 0.0 7.2 5 2 3 8 8 8 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO89405.1 - 2.9e-05 24.1 8.0 10 7.0 0.0 8.8 11 1 1 12 12 12 1 Ankyrin repeat TFIIA PF03153.13 RKO89406.1 - 0.068 13.2 0.5 0.096 12.7 0.5 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit HATPase_c_3 PF13589.6 RKO89407.1 - 0.0091 15.8 0.1 0.06 13.2 0.1 2.1 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PolyA_pol PF01743.20 RKO89408.1 - 1.3e-29 103.2 0.3 2.3e-29 102.4 0.3 1.4 1 0 0 1 1 1 1 Poly A polymerase head domain PolyA_pol_RNAbd PF12627.7 RKO89408.1 - 7.4e-06 25.6 0.0 1.5e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 Probable RNA and SrmB- binding site of polymerase A Aha1_N PF09229.11 RKO89409.1 - 2.9e-40 137.6 1.7 4.2e-40 137.1 1.7 1.2 1 0 0 1 1 1 1 Activator of Hsp90 ATPase, N-terminal AHSA1 PF08327.11 RKO89409.1 - 1.2e-21 77.2 1.3 2.8e-21 76.0 0.3 2.0 2 1 0 2 2 2 1 Activator of Hsp90 ATPase homolog 1-like protein Pyr_redox_3 PF13738.6 RKO89409.1 - 0.0066 15.7 1.0 0.019 14.2 0.1 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DUF4618 PF15397.6 RKO89411.1 - 0.002 17.6 4.0 0.0025 17.3 4.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4618) Macoilin PF09726.9 RKO89411.1 - 0.072 11.6 1.9 0.081 11.5 1.9 1.0 1 0 0 1 1 1 0 Macoilin family SDH_sah PF01972.16 RKO89411.1 - 0.087 11.8 0.4 0.1 11.6 0.4 1.1 1 0 0 1 1 1 0 Serine dehydrogenase proteinase Matrilin_ccoil PF10393.9 RKO89411.1 - 0.16 11.8 2.9 11 6.0 0.3 2.6 2 0 0 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin BBP1_C PF15272.6 RKO89411.1 - 0.5 10.2 4.2 1.1 9.0 4.2 1.5 1 1 0 1 1 1 0 Spindle pole body component BBP1, C-terminal UQ_con PF00179.26 RKO89412.1 - 1.2e-38 132.0 0.1 1.4e-38 131.7 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 RKO89412.1 - 0.099 12.9 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 RWD domain MutL_C PF08676.11 RKO89413.1 - 1.8e-30 105.7 0.0 2.3e-30 105.3 0.0 1.1 1 0 0 1 1 1 1 MutL C terminal dimerisation domain Fibin PF15819.5 RKO89414.1 - 0.095 12.5 0.1 0.13 12.0 0.1 1.2 1 0 0 1 1 1 0 Fin bud initiation factor homologue DUF4519 PF15012.6 RKO89414.1 - 2.9 8.1 5.1 4.5 7.5 5.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4519) DUF5086 PF16985.5 RKO89415.1 - 0.1 12.5 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5086) Thioredoxin PF00085.20 RKO89417.1 - 3.6e-18 65.5 0.0 3.8e-18 65.4 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 RKO89417.1 - 6.9e-05 22.3 0.0 7.6e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family DUF2847 PF11009.8 RKO89417.1 - 0.00049 20.0 0.0 0.00053 19.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2847) Thioredoxin_2 PF13098.6 RKO89417.1 - 0.0088 16.5 0.1 0.03 14.8 0.1 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain Redoxin PF08534.10 RKO89417.1 - 0.023 14.4 0.0 0.025 14.3 0.0 1.0 1 0 0 1 1 1 0 Redoxin T4_deiodinase PF00837.17 RKO89417.1 - 0.041 13.2 0.0 0.054 12.8 0.0 1.2 1 0 0 1 1 1 0 Iodothyronine deiodinase Baculo_11_kDa PF06143.11 RKO89417.1 - 0.13 11.8 0.2 0.18 11.4 0.2 1.2 1 0 0 1 1 1 0 Baculovirus 11 kDa family Kinetochor_Ybp2 PF08568.10 RKO89418.1 - 6.8e-13 48.0 0.0 6.6e-09 34.8 0.0 2.4 2 1 0 2 2 2 2 Uncharacterised protein family, YAP/Alf4/glomulin Pam16 PF03656.13 RKO89419.1 - 1.7e-07 31.3 0.0 2e-07 31.1 0.0 1.1 1 0 0 1 1 1 1 Pam16 DnaJ PF00226.31 RKO89419.1 - 0.00012 22.1 0.0 0.0002 21.4 0.0 1.3 1 1 0 1 1 1 1 DnaJ domain LapA_dom PF06305.11 RKO89421.1 - 0.24 11.3 0.7 0.29 11.0 0.1 1.4 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain CcmD PF04995.14 RKO89421.1 - 0.47 10.6 5.8 0.8 9.8 5.8 1.3 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) HEAT PF02985.22 RKO89422.1 - 0.25 11.7 0.8 2.4 8.7 0.2 2.9 3 0 0 3 3 3 0 HEAT repeat IBD PF10416.9 RKO89423.1 - 0.0057 16.7 0.0 0.01 15.8 0.0 1.4 1 0 0 1 1 1 1 Transcription-initiator DNA-binding domain IBD peroxidase PF00141.23 RKO89425.1 - 3.1e-15 56.5 0.0 8.9e-15 55.0 0.0 1.7 2 0 0 2 2 2 1 Peroxidase Pectinesterase PF01095.19 RKO89428.1 - 2.1e-08 33.2 0.0 2.1e-08 33.2 0.0 4.1 3 3 1 4 4 4 2 Pectinesterase Prp19 PF08606.11 RKO89430.1 - 4.3e-32 109.9 2.5 6.9e-32 109.2 2.5 1.3 1 0 0 1 1 1 1 Prp19/Pso4-like WD40 PF00400.32 RKO89430.1 - 1.7e-16 60.3 12.1 0.43 11.5 0.0 7.2 7 0 0 7 7 7 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO89430.1 - 1.9e-09 37.7 0.3 1.9 8.8 0.0 5.3 3 1 2 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain zf-Nse PF11789.8 RKO89430.1 - 0.0018 18.1 0.0 0.0037 17.1 0.0 1.5 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit DUF5348 PF17295.2 RKO89430.1 - 0.009 15.9 0.0 0.032 14.1 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF5348) BRE1 PF08647.11 RKO89430.1 - 0.011 15.8 0.2 0.018 15.1 0.2 1.3 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase Cytochrom_D1 PF02239.16 RKO89430.1 - 0.015 13.9 0.3 0.16 10.4 0.1 2.5 1 1 0 2 2 2 0 Cytochrome D1 heme domain DUF3450 PF11932.8 RKO89430.1 - 0.031 13.6 1.8 0.052 12.8 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) U-box PF04564.15 RKO89430.1 - 0.033 14.4 0.0 0.094 12.9 0.0 1.7 1 0 0 1 1 1 0 U-box domain Snf7 PF03357.21 RKO89433.1 - 1.3e-18 67.2 0.8 1.3e-18 67.2 0.8 2.7 2 1 1 3 3 3 1 Snf7 TMV_coat PF00721.21 RKO89433.1 - 0.053 13.3 3.0 0.53 10.1 0.0 2.8 2 0 0 2 2 2 0 Virus coat protein (TMV like) SlyX PF04102.12 RKO89433.1 - 0.34 11.5 6.2 4.7 7.9 0.3 3.9 3 1 0 3 3 3 0 SlyX Glyco_trans_1_2 PF13524.6 RKO89433.1 - 0.49 10.8 5.0 0.51 10.8 2.8 2.2 2 0 0 2 2 2 0 Glycosyl transferases group 1 SOBP PF15279.6 RKO89433.1 - 7.1 7.1 15.3 7.8 7.0 12.7 1.9 1 1 1 2 2 2 0 Sine oculis-binding protein Hus1 PF04005.12 RKO89434.1 - 4.9e-25 88.2 0.0 5.5e-25 88.1 0.0 1.0 1 0 0 1 1 1 1 Hus1-like protein RNase_H PF00075.24 RKO89439.1 - 1.6e-17 64.0 0.0 1.9e-17 63.8 0.0 1.1 1 0 0 1 1 1 1 RNase H UCH PF00443.29 RKO89441.1 - 6.8e-20 71.6 0.0 8.6e-20 71.3 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-UBP PF02148.19 RKO89441.1 - 9.3e-12 45.1 13.8 9.3e-12 45.1 13.8 3.2 2 1 1 3 3 3 1 Zn-finger in ubiquitin-hydrolases and other protein UCH_1 PF13423.6 RKO89441.1 - 1.8e-08 34.3 0.7 5.3e-07 29.5 0.7 2.2 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF572 PF04502.13 RKO89444.1 - 6.7e-67 226.5 1.6 7.9e-67 226.2 1.6 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) RNase_PH PF01138.21 RKO89445.1 - 4.7e-24 85.4 0.0 7.1e-24 84.8 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 RKO89445.1 - 6.6e-11 42.1 0.0 1.2e-10 41.2 0.0 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 Ribosomal_S13 PF00416.22 RKO89446.1 - 1.2e-22 80.7 0.1 1.4e-20 73.9 0.1 2.0 1 1 0 1 1 1 1 Ribosomal protein S13/S18 FbpA PF05833.11 RKO89446.1 - 0.091 11.5 0.0 0.11 11.3 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) TatD_DNase PF01026.21 RKO89446.1 - 0.19 11.0 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 TatD related DNase CH PF00307.31 RKO89449.1 - 1.8e-12 47.4 0.0 2.7e-12 46.8 0.0 1.3 1 0 0 1 1 1 1 Calponin homology (CH) domain TIG PF01833.24 RKO89450.1 - 9.4e-09 35.2 0.2 3.8e-08 33.3 0.1 2.0 2 0 0 2 2 2 1 IPT/TIG domain RDM PF11002.8 RKO89452.1 - 0.15 12.1 0.3 10 6.2 0.0 2.4 2 0 0 2 2 2 0 RFPL defining motif (RDM) Glyco_hydro_28 PF00295.17 RKO89454.1 - 4.4e-49 167.3 13.0 5.3e-49 167.0 13.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 Herpes_UL4 PF03277.13 RKO89457.1 - 4.7 6.8 4.7 6.4 6.4 1.1 2.1 2 0 0 2 2 2 0 Herpesvirus UL4 family DER1 PF04511.15 RKO89458.1 - 0.00016 21.7 0.0 0.00029 20.8 0.0 1.4 1 0 0 1 1 1 1 Der1-like family TMEM213 PF15192.6 RKO89458.1 - 0.13 12.2 1.6 0.84 9.6 0.0 2.5 3 0 0 3 3 3 0 TMEM213 family Capsid_N PF16903.5 RKO89461.1 - 4.9e-49 166.8 0.0 6.8e-49 166.3 0.0 1.2 1 0 0 1 1 1 1 Major capsid protein N-terminus Capsid_NCLDV PF04451.12 RKO89461.1 - 2.6e-33 115.5 0.1 4.5e-33 114.7 0.1 1.4 1 0 0 1 1 1 1 Large eukaryotic DNA virus major capsid protein DUF5640 PF18692.1 RKO89461.1 - 0.11 12.6 0.0 0.37 10.8 0.0 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5640) BNIP3 PF06553.12 RKO89462.1 - 0.18 11.5 1.5 0.29 10.8 0.1 1.9 2 0 0 2 2 2 0 BNIP3 Mito_carr PF00153.27 RKO89464.1 - 7.5e-55 182.8 0.3 9e-21 73.6 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein Thioredoxin PF00085.20 RKO89465.1 - 1.1e-48 163.4 2.8 4e-27 94.2 0.0 4.5 4 1 0 4 4 4 3 Thioredoxin Thioredoxin_6 PF13848.6 RKO89465.1 - 4.3e-44 150.6 5.7 7.4e-32 110.7 0.7 3.2 2 1 1 3 3 3 3 Thioredoxin-like domain Calsequestrin PF01216.17 RKO89465.1 - 4e-09 36.0 3.4 9.7e-09 34.7 0.9 2.4 3 0 0 3 3 3 1 Calsequestrin Thioredoxin_8 PF13905.6 RKO89465.1 - 0.00016 21.9 0.0 0.034 14.4 0.0 3.6 4 0 0 4 4 4 1 Thioredoxin-like OST3_OST6 PF04756.13 RKO89465.1 - 0.00029 20.3 0.5 0.036 13.4 0.0 2.9 2 1 1 3 3 3 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 RKO89465.1 - 0.00043 20.7 0.2 0.036 14.5 0.1 3.2 3 1 0 3 3 3 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 RKO89465.1 - 0.0016 18.6 0.0 0.0043 17.2 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin-like ERp29_N PF07912.13 RKO89465.1 - 0.002 18.3 0.5 0.18 12.0 0.0 3.7 4 1 0 4 4 4 1 ERp29, N-terminal domain TraF PF13728.6 RKO89465.1 - 0.034 14.0 0.0 0.14 11.9 0.0 1.9 2 0 0 2 2 2 0 F plasmid transfer operon protein Redoxin PF08534.10 RKO89465.1 - 0.1 12.3 0.1 0.32 10.7 0.0 1.9 2 0 0 2 2 2 0 Redoxin Trefoil PF00088.18 RKO89468.1 - 2.5e-08 33.6 1.3 5.7e-08 32.5 1.3 1.6 1 0 0 1 1 1 1 Trefoil (P-type) domain zf-C2H2_4 PF13894.6 RKO89469.1 - 5.4e-11 42.4 17.6 0.00093 19.8 1.4 3.4 3 0 0 3 3 3 3 C2H2-type zinc finger zf-C2H2 PF00096.26 RKO89469.1 - 8.5e-11 41.7 17.7 0.00032 21.0 1.5 3.4 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 RKO89469.1 - 4e-08 33.3 0.6 0.0018 18.5 0.1 3.4 2 1 1 3 3 3 2 Zinc-finger double-stranded RNA-binding zf-H2C2_2 PF13465.6 RKO89469.1 - 1.2e-07 31.8 18.4 1.4e-05 25.2 0.1 4.3 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_6 PF13912.6 RKO89469.1 - 1.6e-06 28.0 12.7 0.0018 18.2 0.4 3.3 3 0 0 3 3 3 3 C2H2-type zinc finger zf-met PF12874.7 RKO89469.1 - 5.4e-06 26.6 0.9 0.17 12.3 0.1 3.3 3 0 0 3 3 3 2 Zinc-finger of C2H2 type zf-C2H2_8 PF15909.5 RKO89469.1 - 0.00028 21.1 4.7 0.0005 20.3 4.2 1.6 1 1 0 1 1 1 1 C2H2-type zinc ribbon zf-C2H2_11 PF16622.5 RKO89469.1 - 0.023 14.4 0.3 0.023 14.4 0.3 2.7 3 0 0 3 3 3 0 zinc-finger C2H2-type zf_C2H2_ZHX PF18387.1 RKO89469.1 - 0.51 10.0 2.8 2.4 7.9 0.1 2.6 1 1 1 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain zf_ZIC PF18366.1 RKO89469.1 - 2.7 8.2 7.6 1.1 9.4 0.3 3.4 2 1 2 4 4 4 0 Zic proteins zinc finger domain G6PD_C PF02781.16 RKO89471.1 - 1.2e-67 228.1 0.0 1.8e-67 227.6 0.0 1.2 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain G6PD_N PF00479.22 RKO89471.1 - 1.5e-56 191.8 0.0 2e-56 191.4 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, NAD binding domain ADH_N PF08240.12 RKO89474.1 - 2.8e-07 30.4 0.2 5e-07 29.6 0.1 1.5 1 1 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N_2 PF13602.6 RKO89474.1 - 0.00096 20.2 0.0 0.0018 19.3 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase F-box-like PF12937.7 RKO89476.1 - 7.3e-10 38.6 0.5 1.6e-09 37.5 0.5 1.6 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO89476.1 - 0.0018 18.1 0.9 0.012 15.5 0.2 2.5 2 0 0 2 2 2 1 F-box domain F-box-like PF12937.7 RKO89479.1 - 0.0058 16.5 0.8 0.016 15.1 0.8 1.8 1 0 0 1 1 1 1 F-box-like SE PF08491.10 RKO89480.1 - 7.3e-97 323.7 0.0 9e-97 323.4 0.0 1.1 1 0 0 1 1 1 1 Squalene epoxidase FAD_binding_3 PF01494.19 RKO89480.1 - 3.4e-13 49.6 0.0 1.4e-12 47.5 0.0 1.8 1 1 0 1 1 1 1 FAD binding domain DAO PF01266.24 RKO89480.1 - 1.2e-07 31.6 0.1 0.00071 19.3 0.2 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 RKO89480.1 - 2.7e-05 24.3 0.3 6.2e-05 23.1 0.3 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain TrkA_N PF02254.18 RKO89480.1 - 0.0057 16.9 0.1 0.011 16.0 0.1 1.5 1 0 0 1 1 1 1 TrkA-N domain ApbA PF02558.16 RKO89480.1 - 0.012 15.3 0.1 0.02 14.5 0.1 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Trp_halogenase PF04820.14 RKO89480.1 - 0.015 14.2 0.1 1.4 7.7 0.2 2.8 3 0 0 3 3 3 0 Tryptophan halogenase Shikimate_DH PF01488.20 RKO89480.1 - 0.02 15.0 0.0 0.034 14.2 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Pyr_redox_2 PF07992.14 RKO89480.1 - 0.031 13.5 0.1 0.054 12.7 0.1 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 RKO89480.1 - 0.032 13.3 0.6 0.17 10.9 0.4 1.9 2 0 0 2 2 2 0 FAD binding domain 3HCDH_N PF02737.18 RKO89480.1 - 0.034 14.0 0.1 0.055 13.3 0.1 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 RKO89480.1 - 0.044 13.8 0.0 0.076 13.0 0.0 1.3 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GIDA PF01134.22 RKO89480.1 - 0.045 12.8 0.1 1.2 8.2 0.2 2.0 2 0 0 2 2 2 0 Glucose inhibited division protein A Pyr_redox PF00070.27 RKO89480.1 - 0.048 14.2 0.0 0.12 12.9 0.0 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 RKO89480.1 - 0.14 11.4 0.0 1.3 8.2 0.0 2.0 2 0 0 2 2 2 0 Thi4 family ThiF PF00899.21 RKO89480.1 - 0.17 11.2 0.1 0.35 10.2 0.1 1.4 1 0 0 1 1 1 0 ThiF family AA_permease PF00324.21 RKO89481.1 - 1.9e-10 40.0 8.7 2.2e-10 39.7 8.7 1.1 1 0 0 1 1 1 1 Amino acid permease DUF3742 PF12553.8 RKO89481.1 - 0.044 13.9 1.2 0.052 13.7 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3742) Pannexin_like PF12534.8 RKO89482.1 - 0.013 14.6 0.0 0.013 14.6 0.0 1.0 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 FAD_binding_8 PF08022.12 RKO89483.1 - 3.8e-21 75.2 0.0 8.5e-21 74.1 0.0 1.6 1 0 0 1 1 1 1 FAD-binding domain Ferric_reduct PF01794.19 RKO89483.1 - 3.5e-18 65.9 15.8 8.8e-18 64.6 15.8 1.7 1 0 0 1 1 1 1 Ferric reductase like transmembrane component FAD_binding_6 PF00970.24 RKO89483.1 - 0.18 12.1 0.0 0.36 11.2 0.0 1.4 1 0 0 1 1 1 0 Oxidoreductase FAD-binding domain NUDE_C PF04880.13 RKO89485.1 - 1.2e-11 45.4 14.1 3.3e-09 37.5 7.3 3.5 3 1 0 3 3 3 2 NUDE protein, C-terminal conserved region DUF776 PF05604.11 RKO89485.1 - 0.00073 20.0 0.1 0.0012 19.2 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF776) bZIP_2 PF07716.15 RKO89485.1 - 0.023 14.8 0.4 0.023 14.8 0.4 4.5 4 2 1 5 5 5 0 Basic region leucine zipper Phage_GP20 PF06810.11 RKO89485.1 - 0.034 14.0 0.4 0.034 14.0 0.4 2.1 3 0 0 3 3 3 0 Phage minor structural protein GP20 COMP PF11598.8 RKO89485.1 - 0.072 13.6 0.7 0.34 11.4 0.0 2.4 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein ZapB PF06005.12 RKO89485.1 - 0.12 12.8 18.7 0.82 10.2 1.5 3.6 2 1 1 3 3 3 0 Cell division protein ZapB DUF2353 PF09789.9 RKO89485.1 - 0.14 11.5 10.7 0.19 11.1 3.2 2.2 2 0 0 2 2 2 0 Uncharacterized coiled-coil protein (DUF2353) Nas2_N PF18265.1 RKO89485.1 - 0.19 11.6 2.4 0.3 11.0 0.1 2.5 3 0 0 3 3 3 0 Nas2 N_terminal domain LPP PF04728.13 RKO89485.1 - 0.45 10.9 8.8 0.24 11.8 2.2 3.0 3 0 0 3 3 3 0 Lipoprotein leucine-zipper TPR_MLP1_2 PF07926.12 RKO89485.1 - 0.61 10.2 18.6 0.049 13.7 2.4 3.3 3 1 0 3 3 3 0 TPR/MLP1/MLP2-like protein ATG16 PF08614.11 RKO89485.1 - 1 9.5 24.1 0.64 10.2 1.0 4.1 2 1 1 3 3 3 0 Autophagy protein 16 (ATG16) HMMR_N PF15905.5 RKO89485.1 - 1.3 8.4 13.4 0.11 12.0 0.6 2.2 2 0 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal CENP-F_leu_zip PF10473.9 RKO89485.1 - 1.7 8.7 17.3 1.7 8.6 1.7 3.3 2 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HAUS-augmin3 PF14932.6 RKO89485.1 - 2 7.9 10.7 1.4 8.4 0.5 2.6 2 1 1 3 3 3 0 HAUS augmin-like complex subunit 3 GrpE PF01025.19 RKO89485.1 - 2.5 7.7 7.5 0.1 12.3 1.0 1.9 2 1 0 2 2 2 0 GrpE Syntaxin-6_N PF09177.11 RKO89485.1 - 2.7 8.6 8.2 1.4 9.6 0.3 3.1 2 1 0 2 2 2 0 Syntaxin 6, N-terminal TSC22 PF01166.18 RKO89485.1 - 3.9 7.9 10.4 23 5.4 0.8 3.9 3 1 0 3 3 3 0 TSC-22/dip/bun family PRKG1_interact PF15898.5 RKO89485.1 - 5.5 7.9 16.9 3.6 8.5 0.4 3.2 2 1 1 3 3 3 0 cGMP-dependent protein kinase interacting domain DUF4200 PF13863.6 RKO89485.1 - 6.3 7.2 13.8 3.8 7.9 1.6 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4200) zf-C2H2 PF00096.26 RKO89486.1 - 7.8e-10 38.7 9.9 1.4e-05 25.3 1.0 2.8 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO89486.1 - 2.4e-08 34.1 7.8 0.0013 19.3 0.6 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO89486.1 - 0.00032 21.0 11.8 0.32 11.5 1.8 3.2 3 0 0 3 3 3 3 Zinc-finger double domain zf-met PF12874.7 RKO89486.1 - 0.00082 19.7 7.2 0.1 13.0 0.0 2.6 3 0 0 3 3 3 2 Zinc-finger of C2H2 type zf-Di19 PF05605.12 RKO89486.1 - 0.0014 18.9 3.0 0.0026 18.0 2.3 1.7 1 1 1 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_jaz PF12171.8 RKO89486.1 - 0.0044 17.3 2.6 0.22 11.9 0.0 2.4 2 1 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 RKO89486.1 - 0.008 16.2 6.5 0.092 12.8 0.4 2.5 2 1 0 2 2 2 2 C2H2-type zinc finger Ephrin_rec_like PF07699.13 RKO89486.1 - 0.016 14.9 0.5 0.076 12.8 0.1 1.9 2 0 0 2 2 2 0 Putative ephrin-receptor like zf-BED PF02892.15 RKO89486.1 - 0.027 14.5 1.0 0.027 14.5 1.0 2.1 1 1 1 2 2 2 0 BED zinc finger C5HCH PF17982.1 RKO89486.1 - 0.054 13.6 3.0 2.6 8.2 0.2 2.2 1 1 1 2 2 2 0 NSD Cys-His rich domain zf-H2C2_5 PF13909.6 RKO89486.1 - 0.082 12.7 6.6 0.35 10.7 0.3 2.9 3 0 0 3 3 3 0 C2H2-type zinc-finger domain zf-C2H2_2 PF12756.7 RKO89486.1 - 0.39 11.1 3.8 6.6 7.1 0.7 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) DNA_gyraseB PF00204.25 RKO89490.1 - 6.5e-27 94.1 0.1 1.3e-26 93.1 0.0 1.5 2 0 0 2 2 2 1 DNA gyrase B HATPase_c PF02518.26 RKO89490.1 - 7.3e-10 39.4 0.1 8e-09 36.0 0.1 2.2 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LRR_4 PF12799.7 RKO89492.1 - 0.0032 17.8 0.1 1.4 9.4 0.0 4.1 4 1 0 4 4 4 1 Leucine Rich repeats (2 copies) Ammonium_transp PF00909.21 RKO89493.1 - 3.1e-95 319.2 20.2 4.9e-95 318.6 20.2 1.3 1 1 0 1 1 1 1 Ammonium Transporter Family DUF3864 PF12980.7 RKO89495.1 - 0.22 11.9 1.1 0.71 10.2 0.1 2.3 2 1 0 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3864) Abhydrolase_3 PF07859.13 RKO89496.1 - 3.5e-22 79.3 0.0 7.9e-22 78.1 0.0 1.5 1 1 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 RKO89496.1 - 7.9e-15 54.6 0.0 1e-14 54.2 0.0 1.2 1 0 0 1 1 1 1 Steryl acetyl hydrolase Hydrolase_4 PF12146.8 RKO89496.1 - 0.0027 17.0 0.1 0.025 13.8 0.1 2.0 1 1 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO89496.1 - 0.056 14.0 0.6 0.073 13.7 0.6 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase family Abhydrolase_3 PF07859.13 RKO89497.1 - 2.6e-28 99.3 0.0 7.6e-28 97.8 0.0 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 RKO89497.1 - 6.1e-19 68.1 0.0 8.5e-19 67.6 0.0 1.3 1 0 0 1 1 1 1 Steryl acetyl hydrolase Hydrolase_4 PF12146.8 RKO89497.1 - 0.0057 15.9 0.0 0.031 13.6 0.0 1.9 2 0 0 2 2 2 1 Serine aminopeptidase, S33 AAA_11 PF13086.6 RKO89498.1 - 3.6e-26 92.5 0.1 2.8e-24 86.3 0.0 3.1 3 1 0 3 3 3 1 AAA domain AAA_19 PF13245.6 RKO89498.1 - 1.4e-10 41.6 0.0 2e-09 38.0 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_12 PF13087.6 RKO89498.1 - 6.4e-05 22.7 0.0 0.00017 21.3 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 RKO89498.1 - 9.7e-05 22.2 0.0 0.025 14.3 0.0 2.6 2 0 0 2 2 2 1 AAA domain DUF2075 PF09848.9 RKO89498.1 - 0.005 16.1 0.0 0.0096 15.2 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) zf-CCCH_4 PF18044.1 RKO89498.1 - 0.053 13.3 4.2 0.091 12.6 4.2 1.4 1 0 0 1 1 1 0 CCCH-type zinc finger Torus PF16131.5 RKO89498.1 - 0.055 14.2 0.1 0.16 12.7 0.1 1.8 1 0 0 1 1 1 0 Torus domain PhoH PF02562.16 RKO89498.1 - 0.055 12.9 0.0 0.34 10.3 0.0 2.1 2 0 0 2 2 2 0 PhoH-like protein ResIII PF04851.15 RKO89498.1 - 0.057 13.4 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_18 PF13238.6 RKO89498.1 - 0.066 13.8 0.3 0.95 10.0 0.0 2.9 3 0 0 3 3 3 0 AAA domain Duffy_binding PF05424.11 RKO89498.1 - 0.073 13.1 0.0 0.26 11.3 0.0 1.9 2 0 0 2 2 2 0 Duffy binding domain COMP PF11598.8 RKO89498.1 - 0.082 13.4 0.2 0.27 11.8 0.2 1.9 1 0 0 1 1 1 0 Cartilage oligomeric matrix protein AAA PF00004.29 RKO89498.1 - 0.094 13.1 0.0 0.27 11.6 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 RKO89498.1 - 0.22 11.9 1.0 4.7 7.6 0.0 3.0 2 1 0 2 2 2 0 AAA ATPase domain zf_CCCH_4 PF18345.1 RKO89498.1 - 0.5 10.5 7.0 0.96 9.6 7.0 1.5 1 0 0 1 1 1 0 Zinc finger domain LtrA PF06772.11 RKO89499.1 - 3.1e-36 125.3 23.9 1.6e-35 123.0 23.8 2.2 2 1 0 2 2 2 1 Bacterial low temperature requirement A protein (LtrA) Ank_5 PF13857.6 RKO89500.1 - 0.0026 18.0 0.0 0.0057 16.9 0.0 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO89500.1 - 0.071 13.7 0.0 0.11 13.2 0.0 1.2 1 0 0 1 1 1 0 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO89500.1 - 0.095 13.3 0.0 0.16 12.6 0.0 1.4 1 0 0 1 1 1 0 Ankyrin repeats (many copies) DNA_primase_S PF01896.19 RKO89501.1 - 0.038 14.0 0.0 0.087 12.9 0.0 1.6 1 1 0 1 1 1 0 DNA primase small subunit DUF621 PF04789.15 RKO89501.1 - 0.093 11.9 0.0 0.16 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF621) Surp PF01805.20 RKO89503.1 - 1e-17 63.8 0.2 2.5e-17 62.6 0.2 1.6 1 0 0 1 1 1 1 Surp module RRM_1 PF00076.22 RKO89503.1 - 1.9e-15 56.4 0.0 6.2e-15 54.8 0.0 2.0 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CTD_bind PF04818.13 RKO89503.1 - 5e-05 24.0 0.0 0.00014 22.6 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase II-binding domain. CTK3 PF12243.8 RKO89503.1 - 0.039 14.0 0.0 0.076 13.0 0.0 1.4 1 0 0 1 1 1 0 CTD kinase subunit gamma CTK3 Nab6_mRNP_bdg PF10567.9 RKO89503.1 - 0.15 11.5 0.0 0.32 10.4 0.0 1.4 1 0 0 1 1 1 0 RNA-recognition motif RRM_7 PF16367.5 RKO89503.1 - 0.15 12.2 0.0 0.37 10.9 0.0 1.7 1 0 0 1 1 1 0 RNA recognition motif SAM_2 PF07647.17 RKO89507.1 - 9.1e-16 57.7 0.0 1.5e-15 57.1 0.0 1.4 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_1 PF00536.30 RKO89507.1 - 4.2e-12 46.3 0.0 7.5e-12 45.5 0.0 1.4 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_Ste50p PF09235.10 RKO89507.1 - 2.1e-05 24.6 0.1 4.3e-05 23.7 0.1 1.4 1 0 0 1 1 1 1 Ste50p, sterile alpha motif SAM_PNT PF02198.16 RKO89507.1 - 0.01 15.8 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 0 Sterile alpha motif (SAM)/Pointed domain SAM_3 PF18016.1 RKO89507.1 - 0.019 14.8 0.0 0.034 13.9 0.0 1.4 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Ras PF00071.22 RKO89508.1 - 4.6e-32 110.9 0.0 5e-32 110.7 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO89508.1 - 7.1e-17 61.7 0.0 8.5e-17 61.5 0.0 1.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO89508.1 - 5.1e-07 29.3 0.0 5.3e-07 29.2 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 RKO89508.1 - 0.062 12.7 0.0 0.067 12.6 0.0 1.1 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 RKO89508.1 - 0.18 11.3 0.0 5.1 6.6 0.0 2.0 1 1 0 2 2 2 0 Elongation factor Tu GTP binding domain Topoisom_I_N PF02919.15 RKO89509.1 - 8.6e-96 319.5 0.3 8.6e-96 319.5 0.3 2.2 2 0 0 2 2 2 1 Eukaryotic DNA topoisomerase I, DNA binding fragment Topoisom_I PF01028.20 RKO89509.1 - 2.5e-72 242.9 3.1 2.8e-70 236.2 3.1 2.5 1 1 0 1 1 1 1 Eukaryotic DNA topoisomerase I, catalytic core Topo_C_assoc PF14370.6 RKO89509.1 - 2.2e-28 98.0 2.4 6.8e-28 96.4 2.4 1.9 1 0 0 1 1 1 1 C-terminal topoisomerase domain PHM7_cyt PF14703.6 RKO89509.1 - 0.68 10.1 9.8 0.23 11.6 4.2 2.6 2 1 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter TcpS PF17456.2 RKO89509.1 - 1.6 8.8 6.8 18 5.3 1.3 2.7 1 1 1 2 2 2 0 Toxin-coregulated pilus protein S Homeodomain PF00046.29 RKO89510.1 - 3.2e-17 62.1 1.5 3.4e-17 62.0 1.5 1.0 1 0 0 1 1 1 1 Homeodomain Homeobox_KN PF05920.11 RKO89510.1 - 0.0021 17.9 0.5 0.0023 17.8 0.5 1.3 1 1 0 1 1 1 1 Homeobox KN domain Homez PF11569.8 RKO89510.1 - 0.0036 16.7 0.0 0.0036 16.7 0.0 1.2 1 0 0 1 1 1 1 Homeodomain leucine-zipper encoding, Homez TMEM223 PF14640.6 RKO89511.1 - 6.9e-25 88.1 0.0 8.5e-25 87.8 0.0 1.0 1 0 0 1 1 1 1 Transmembrane protein 223 TMEM61 PF15105.6 RKO89511.1 - 0.048 13.5 0.4 4.4 7.1 0.0 2.2 1 1 0 2 2 2 0 TMEM61 protein family Glyco_hydro_16 PF00722.21 RKO89512.1 - 4e-24 85.1 0.6 5.4e-24 84.6 0.6 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 RasGEF_N PF00618.20 RKO89513.1 - 1.2e-13 51.2 0.2 2.2e-13 50.3 0.2 1.4 1 0 0 1 1 1 1 RasGEF N-terminal motif Proteasome PF00227.26 RKO89514.1 - 1.5e-31 109.4 0.0 1.8e-31 109.1 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome PF00227.26 RKO89515.1 - 3.7e-22 78.8 0.1 4e-22 78.6 0.1 1.0 1 0 0 1 1 1 1 Proteasome subunit Glyco_hydro_28 PF00295.17 RKO89516.1 - 0.003 16.7 0.5 0.0035 16.5 0.5 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 Pectinesterase PF01095.19 RKO89518.1 - 5.9e-36 123.7 0.1 9e-36 123.1 0.1 1.2 1 0 0 1 1 1 1 Pectinesterase Pectate_lyase_3 PF12708.7 RKO89518.1 - 0.012 15.4 0.4 0.022 14.6 0.4 1.6 1 1 0 1 1 1 0 Pectate lyase superfamily protein ABC2_membrane PF01061.24 RKO89520.1 - 1.7e-39 135.5 15.3 2.2e-39 135.1 15.3 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC_tran PF00005.27 RKO89520.1 - 1.6e-13 51.4 0.0 3.2e-13 50.4 0.0 1.5 1 0 0 1 1 1 1 ABC transporter ABC2_membrane_3 PF12698.7 RKO89520.1 - 0.0012 18.0 15.9 0.0012 18.0 15.9 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein Caveolin PF01146.17 RKO89520.1 - 1.3 9.0 3.9 3.7 7.5 0.7 2.3 2 0 0 2 2 2 0 Caveolin LRR_6 PF13516.6 RKO89521.1 - 0.08 13.0 2.1 20 5.5 0.0 4.2 4 0 0 4 4 4 0 Leucine Rich repeat NAM-associated PF14303.6 RKO89522.1 - 9.7e-21 75.2 3.6 1.7e-20 74.4 3.6 1.4 1 0 0 1 1 1 1 No apical meristem-associated C-terminal domain PuR_N PF09182.10 RKO89522.1 - 0.15 12.0 0.1 0.26 11.3 0.1 1.4 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal Phage_integrase PF00589.22 RKO89523.1 - 0.01 15.6 0.0 0.023 14.5 0.0 1.5 1 0 0 1 1 1 0 Phage integrase family PglZ PF08665.12 RKO89523.1 - 0.11 12.6 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 PglZ domain ARS2 PF04959.13 RKO89524.1 - 1.7e-05 25.3 0.2 4e-05 24.1 0.1 1.5 1 1 1 2 2 2 1 Arsenite-resistance protein 2 EF-hand_5 PF13202.6 RKO89526.1 - 0.04 13.4 0.1 0.068 12.7 0.1 1.3 1 0 0 1 1 1 0 EF hand Glyco_hydro_26 PF02156.15 RKO89526.1 - 0.063 12.7 0.3 0.09 12.2 0.3 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 26 Dockerin_1 PF00404.18 RKO89526.1 - 0.14 12.4 0.3 0.19 11.9 0.3 1.2 1 0 0 1 1 1 0 Dockerin type I domain LRR_4 PF12799.7 RKO89529.1 - 9.3e-05 22.7 6.4 0.1 13.1 0.3 3.6 3 1 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO89529.1 - 0.00094 18.9 6.4 0.042 13.6 1.7 2.8 2 0 0 2 2 2 2 Leucine rich repeat F-box-like PF12937.7 RKO89530.1 - 5.4e-07 29.4 0.1 4.4e-06 26.5 0.0 2.5 2 0 0 2 2 2 1 F-box-like LRR_8 PF13855.6 RKO89530.1 - 0.026 14.3 0.3 0.27 11.0 0.0 2.7 3 0 0 3 3 3 0 Leucine rich repeat LRR_6 PF13516.6 RKO89530.1 - 0.027 14.5 0.8 3.2 8.0 0.0 4.1 5 0 0 5 5 5 0 Leucine Rich repeat ECR1_N PF14382.6 RKO89530.1 - 0.042 13.7 0.2 0.34 10.8 0.0 2.3 2 0 0 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region Halo_GVPC PF05465.13 RKO89532.1 - 0.21 11.9 0.1 0.37 11.1 0.1 1.4 1 0 0 1 1 1 0 Halobacterial gas vesicle protein C (GVPC) repeat ATP-synt_D PF01813.17 RKO89535.1 - 7.3e-25 88.0 1.3 7.3e-25 88.0 1.3 1.9 2 0 0 2 2 2 1 ATP synthase subunit D SAM_decarbox PF01536.16 RKO89535.1 - 0.09 11.8 0.1 0.093 11.7 0.1 1.0 1 0 0 1 1 1 0 Adenosylmethionine decarboxylase CBS PF00571.28 RKO89536.1 - 2.6e-18 66.2 3.7 5e-06 26.9 0.1 5.1 4 2 0 4 4 4 3 CBS domain Lipase_3 PF01764.25 RKO89538.1 - 2.3e-27 95.6 0.0 3e-27 95.2 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO89538.1 - 8.8e-06 25.4 0.6 7e-05 22.5 0.6 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 RKO89538.1 - 0.017 14.4 0.1 0.036 13.3 0.0 1.5 2 0 0 2 2 2 0 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO89538.1 - 0.03 14.9 3.5 0.023 15.3 1.8 1.6 1 1 1 2 2 2 0 Alpha/beta hydrolase family Esterase PF00756.20 RKO89538.1 - 0.094 12.3 0.1 0.15 11.7 0.1 1.3 1 0 0 1 1 1 0 Putative esterase DUF676 PF05057.14 RKO89538.1 - 0.15 11.5 0.0 0.21 11.1 0.0 1.1 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Lustrin_cystein PF14625.6 RKO89539.1 - 0.019 15.3 0.2 0.03 14.7 0.2 1.4 1 0 0 1 1 1 0 Lustrin, cysteine-rich repeated domain Gaa1 PF04114.14 RKO89541.1 - 3.4e-111 372.7 0.0 4e-111 372.5 0.0 1.0 1 0 0 1 1 1 1 Gaa1-like, GPI transamidase component Hormone_3 PF00159.18 RKO89541.1 - 0.15 12.1 0.0 3.9 7.6 0.0 2.4 2 0 0 2 2 2 0 Pancreatic hormone peptide Zot PF05707.12 RKO89542.1 - 0.00029 20.6 0.0 0.00057 19.6 0.0 1.5 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) AAA_22 PF13401.6 RKO89542.1 - 0.00052 20.3 0.1 0.32 11.3 0.0 2.4 2 1 0 2 2 2 2 AAA domain DUF853 PF05872.12 RKO89542.1 - 0.0048 15.6 0.1 0.009 14.6 0.0 1.4 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF853) DEAD PF00270.29 RKO89542.1 - 0.1 12.3 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 DEAD/DEAH box helicase Mon2_C PF16206.5 RKO89543.1 - 6.5e-52 176.7 1.2 2.4e-43 148.4 0.0 4.6 2 2 1 3 3 3 2 C-terminal region of Mon2 protein Sec7_N PF12783.7 RKO89543.1 - 3e-34 118.2 0.8 3.9e-32 111.3 0.4 3.5 3 1 1 4 4 4 1 Guanine nucleotide exchange factor in Golgi transport N-terminal DUF1981 PF09324.10 RKO89543.1 - 0.005 16.7 0.1 0.04 13.8 0.0 2.6 3 0 0 3 3 3 1 Domain of unknown function (DUF1981) HEAT PF02985.22 RKO89543.1 - 0.034 14.4 3.5 6.3 7.3 0.1 5.0 5 0 0 5 5 5 0 HEAT repeat DEC-1_N PF04625.13 RKO89543.1 - 5.9 5.8 17.2 0.057 12.4 4.2 2.9 3 0 0 3 3 3 0 DEC-1 protein, N-terminal region DCB PF16213.5 RKO89544.1 - 2.4e-13 50.1 1.0 3e-13 49.8 1.0 1.1 1 0 0 1 1 1 1 Dimerisation and cyclophilin-binding domain of Mon2 DCB PF16213.5 RKO89545.1 - 2.2e-20 73.1 0.0 5.7e-19 68.5 0.0 2.0 1 1 0 1 1 1 1 Dimerisation and cyclophilin-binding domain of Mon2 HSF_DNA-bind PF00447.17 RKO89546.1 - 5e-28 97.6 0.8 8.6e-28 96.8 0.8 1.4 1 0 0 1 1 1 1 HSF-type DNA-binding Response_reg PF00072.24 RKO89546.1 - 2.1e-23 82.6 0.0 5.4e-23 81.3 0.1 1.7 2 0 0 2 2 2 1 Response regulator receiver domain Exo_endo_phos PF03372.23 RKO89547.1 - 6.6e-05 22.5 0.0 8.9e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family FA PF08736.11 RKO89547.1 - 0.19 11.9 0.7 24 5.1 0.0 2.3 2 0 0 2 2 2 0 FERM adjacent (FA) ABC2_membrane PF01061.24 RKO89550.1 - 6.2e-43 146.7 14.7 9.3e-43 146.1 14.7 1.3 1 0 0 1 1 1 1 ABC-2 type transporter ABC_tran PF00005.27 RKO89550.1 - 1.3e-26 93.8 0.0 2.1e-26 93.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 RKO89550.1 - 5.7e-05 23.1 0.7 9.2e-05 22.4 0.1 1.6 2 0 0 2 2 1 1 RsgA GTPase ABC2_membrane_3 PF12698.7 RKO89550.1 - 9.1e-05 21.7 11.4 9.1e-05 21.7 11.4 2.1 1 1 0 2 2 2 1 ABC-2 family transporter protein AAA_16 PF13191.6 RKO89550.1 - 0.00078 19.9 0.0 0.0014 19.1 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_28 PF13521.6 RKO89550.1 - 0.0047 17.2 0.5 0.011 16.0 0.5 1.6 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 RKO89550.1 - 0.0069 16.2 0.1 2.3 8.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system T2SSE PF00437.20 RKO89550.1 - 0.022 13.8 0.3 0.037 13.1 0.3 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein MMR_HSR1 PF01926.23 RKO89550.1 - 0.024 14.7 0.2 0.047 13.8 0.2 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_29 PF13555.6 RKO89550.1 - 0.032 14.0 0.3 0.071 12.9 0.3 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.6 RKO89550.1 - 0.047 13.4 0.0 0.085 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 RKO89550.1 - 0.051 13.8 0.1 0.17 12.1 0.0 1.9 3 0 0 3 3 1 0 AAA domain NACHT PF05729.12 RKO89550.1 - 0.062 13.2 0.1 0.14 12.1 0.1 1.6 1 0 0 1 1 1 0 NACHT domain AAA_30 PF13604.6 RKO89550.1 - 0.087 12.5 0.3 0.18 11.5 0.3 1.4 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 RKO89550.1 - 0.11 12.9 0.1 0.36 11.2 0.0 1.9 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 RKO89550.1 - 0.11 12.5 0.2 0.3 11.1 0.2 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF2075 PF09848.9 RKO89550.1 - 0.13 11.5 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) MeaB PF03308.16 RKO89550.1 - 0.18 10.8 0.4 0.32 9.9 0.4 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 RKO89550.1 - 0.19 11.3 0.3 0.32 10.6 0.3 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Pkinase PF00069.25 RKO89552.1 - 2e-25 89.7 0.0 2.2e-25 89.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO89552.1 - 2.8e-19 69.4 0.0 3.3e-19 69.2 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO89552.1 - 0.031 14.2 0.0 0.033 14.1 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kdo PF06293.14 RKO89552.1 - 0.23 10.8 0.1 0.27 10.6 0.1 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Aa_trans PF01490.18 RKO89553.1 - 1.8e-24 86.2 4.4 2.1e-24 86.0 4.4 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein UCH PF00443.29 RKO89555.1 - 1.5e-21 77.0 0.1 1.8e-21 76.8 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 RKO89555.1 - 0.0066 16.1 0.0 0.0069 16.0 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-UBP PF02148.19 RKO89556.1 - 4.8e-09 36.4 3.0 8.2e-09 35.7 3.0 1.3 1 0 0 1 1 1 1 Zn-finger in ubiquitin-hydrolases and other protein zf-UBP_var PF17807.1 RKO89556.1 - 0.034 13.9 1.0 0.06 13.1 1.0 1.3 1 0 0 1 1 1 0 Variant UBP zinc finger CBM_48 PF02922.18 RKO89557.1 - 6.7e-16 58.4 0.0 1.3e-15 57.5 0.0 1.5 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Alpha-amylase PF00128.24 RKO89557.1 - 1.4e-10 41.3 0.0 1e-07 31.9 0.0 2.2 1 1 1 2 2 2 2 Alpha amylase, catalytic domain AMPK1_CBM PF16561.5 RKO89557.1 - 0.05 13.8 0.0 0.1 12.8 0.0 1.4 1 0 0 1 1 1 0 Glycogen recognition site of AMP-activated protein kinase BALF1 PF06861.11 RKO89559.1 - 0.85 9.2 4.5 0.66 9.6 2.5 1.6 1 1 1 2 2 2 0 BALF1 protein RNA_pol_Rpb6 PF01192.22 RKO89560.1 - 1.3e-17 63.4 0.1 1.9e-17 62.9 0.1 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb6 WD40 PF00400.32 RKO89562.1 - 3.5e-18 65.6 7.6 9.5e-06 26.3 0.9 5.2 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO89562.1 - 1.5e-06 28.4 0.0 0.32 11.3 0.0 4.0 1 1 3 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO89562.1 - 0.0025 16.5 0.5 0.54 8.8 0.1 2.7 2 1 1 3 3 3 2 Nucleoporin Nup120/160 DUF4596 PF15363.6 RKO89562.1 - 0.099 12.9 0.1 0.2 11.9 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4596) Fes1 PF08609.10 RKO89563.1 - 3.5e-11 43.8 0.0 6.4e-06 27.0 0.0 2.1 2 0 0 2 2 2 2 Nucleotide exchange factor Fes1 DDE_Tnp_4 PF13359.6 RKO89566.1 - 0.00045 19.9 0.1 0.043 13.5 0.1 2.8 1 1 0 1 1 1 1 DDE superfamily endonuclease EspB PF05802.11 RKO89568.1 - 7e-05 22.9 0.0 0.0069 16.4 0.0 2.2 1 1 1 2 2 2 1 Enterobacterial EspB protein CENP-F_leu_zip PF10473.9 RKO89568.1 - 0.0068 16.4 3.1 0.0068 16.4 3.1 2.7 2 1 1 3 3 3 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TEX12 PF15219.6 RKO89568.1 - 0.023 15.0 1.0 0.088 13.1 1.0 2.1 1 0 0 1 1 1 0 Testis-expressed 12 ABC_tran_Xtn PF12848.7 RKO89568.1 - 0.1 12.7 0.2 0.1 12.7 0.2 2.9 3 0 0 3 3 2 0 ABC transporter Baculo_PEP_C PF04513.12 RKO89568.1 - 0.15 12.1 7.5 0.4 10.7 3.4 2.6 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4407 PF14362.6 RKO89568.1 - 0.19 11.0 14.4 0.077 12.3 9.8 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4407) TERB2 PF15101.6 RKO89568.1 - 0.71 9.9 6.8 0.85 9.6 2.6 2.3 2 0 0 2 2 2 0 Telomere-associated protein TERB2 Tweety PF04906.13 RKO89568.1 - 0.75 8.4 6.7 0.25 9.9 1.4 2.2 2 0 0 2 2 2 0 Tweety Exonuc_VII_L PF02601.15 RKO89568.1 - 1.1 8.8 12.1 0.58 9.7 9.7 1.7 2 0 0 2 2 2 0 Exonuclease VII, large subunit Tau95_N PF17682.1 RKO89568.1 - 1.5 9.0 5.1 0.88 9.8 2.0 2.2 2 1 0 2 2 2 0 Tau95 Triple barrel domain DUF4795 PF16043.5 RKO89568.1 - 1.8 8.1 14.1 4.1 7.0 14.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) PRKG1_interact PF15898.5 RKO89568.1 - 5.7 7.9 20.9 0.06 14.3 2.6 3.6 2 1 1 3 3 3 0 cGMP-dependent protein kinase interacting domain CorA PF01544.18 RKO89568.1 - 5.9 6.1 9.4 5 6.3 6.2 2.3 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein Epimerase PF01370.21 RKO89569.1 - 1.6e-44 152.2 0.0 2.2e-44 151.7 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 RKO89569.1 - 3e-13 49.9 0.0 5.7e-11 42.4 0.0 2.3 1 1 1 2 2 2 2 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 RKO89569.1 - 7.4e-09 35.1 0.0 1.2e-08 34.4 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 RKO89569.1 - 3.5e-05 23.0 0.1 0.021 13.8 0.0 3.0 1 1 1 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 RKO89569.1 - 0.00017 20.9 0.4 0.005 16.0 0.0 2.4 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 RKO89569.1 - 0.02 14.0 0.1 4.7 6.3 0.0 2.2 1 1 1 2 2 2 0 Male sterility protein NmrA PF05368.13 RKO89569.1 - 0.089 12.3 0.0 0.5 9.9 0.0 1.9 2 0 0 2 2 2 0 NmrA-like family GCM PF03615.15 RKO89569.1 - 0.089 12.7 0.1 0.69 9.8 0.1 2.1 2 0 0 2 2 2 0 GCM motif protein Kelch_6 PF13964.6 RKO89571.1 - 0.015 15.5 4.7 4.7 7.7 0.1 4.9 5 0 0 5 5 5 0 Kelch motif DUF1752 PF08550.10 RKO89572.1 - 0.00065 19.5 3.4 0.0014 18.4 3.4 1.6 1 0 0 1 1 1 1 Fungal protein of unknown function (DUF1752) AAA_8 PF12780.7 RKO89574.1 - 6.9e-69 232.1 0.0 1.7e-68 230.8 0.0 1.7 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 RKO89574.1 - 2.4e-65 219.8 0.1 2.4e-65 219.8 0.1 4.4 5 1 1 6 6 5 1 ATP-binding dynein motor region MT PF12777.7 RKO89574.1 - 1.5e-47 162.3 10.0 2.5e-47 161.6 10.0 1.3 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor AAA_7 PF12775.7 RKO89574.1 - 3e-38 131.2 0.0 1.7e-35 122.2 0.0 3.0 3 0 0 3 3 3 1 P-loop containing dynein motor region Dynein_heavy PF03028.15 RKO89574.1 - 5.1e-27 94.3 0.0 2.5e-26 92.1 0.0 2.2 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Dynein_AAA_lid PF17852.1 RKO89574.1 - 8.3e-22 77.7 0.1 9.6e-21 74.2 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 RKO89574.1 - 1.2e-16 61.0 0.0 9.8e-05 22.4 0.0 4.6 5 1 0 5 5 4 3 AAA domain (dynein-related subfamily) AAA_lid_11 PF18198.1 RKO89574.1 - 5.2e-14 52.4 0.0 1.7e-13 50.7 0.0 1.9 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_22 PF13401.6 RKO89574.1 - 1.4e-10 41.6 0.6 0.0023 18.2 0.0 4.3 4 0 0 4 4 3 2 AAA domain AAA PF00004.29 RKO89574.1 - 2.6e-09 37.6 0.0 0.0019 18.6 0.0 3.1 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) T2SSE PF00437.20 RKO89574.1 - 1.6e-06 27.4 0.1 0.00083 18.5 0.0 3.0 3 0 0 3 3 3 1 Type II/IV secretion system protein AAA_18 PF13238.6 RKO89574.1 - 2.1e-06 28.3 0.5 0.043 14.4 0.0 3.6 3 1 0 3 3 2 2 AAA domain AAA_33 PF13671.6 RKO89574.1 - 4.5e-06 26.9 0.0 0.2 11.8 0.0 3.2 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 RKO89574.1 - 4.7e-06 27.1 0.0 0.088 13.2 0.0 4.1 3 0 0 3 3 3 1 AAA ATPase domain AAA_14 PF13173.6 RKO89574.1 - 6.3e-05 23.0 0.0 1.2 9.2 0.0 4.1 4 0 0 4 4 3 2 AAA domain AAA_lid_1 PF17857.1 RKO89574.1 - 0.00022 21.4 0.5 0.0067 16.6 0.0 2.8 2 0 0 2 2 2 1 AAA+ lid domain AAA_19 PF13245.6 RKO89574.1 - 0.00038 20.8 0.0 0.068 13.5 0.0 3.0 3 0 0 3 3 2 1 AAA domain AAA_25 PF13481.6 RKO89574.1 - 0.0014 18.3 0.0 0.28 10.7 0.0 2.7 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 RKO89574.1 - 0.0023 17.4 1.1 0.37 10.1 0.0 2.8 3 0 0 3 3 2 1 Magnesium chelatase, subunit ChlI FtsK_SpoIIIE PF01580.18 RKO89574.1 - 0.0034 16.8 0.0 0.28 10.5 0.0 2.7 2 0 0 2 2 2 1 FtsK/SpoIIIE family IstB_IS21 PF01695.17 RKO89574.1 - 0.0045 16.7 0.0 0.12 12.1 0.0 2.5 2 0 0 2 2 2 1 IstB-like ATP binding protein ResIII PF04851.15 RKO89574.1 - 0.0053 16.8 2.0 11 6.0 0.0 3.8 4 0 0 4 4 3 0 Type III restriction enzyme, res subunit ABC_tran PF00005.27 RKO89574.1 - 0.0061 17.1 0.0 1.4 9.4 0.0 3.1 2 0 0 2 2 2 1 ABC transporter AAA_29 PF13555.6 RKO89574.1 - 0.0072 16.0 0.0 0.29 10.9 0.0 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain BRE1 PF08647.11 RKO89574.1 - 0.011 15.8 1.8 0.011 15.8 1.8 3.4 3 1 1 4 4 1 0 BRE1 E3 ubiquitin ligase RuvB_N PF05496.12 RKO89574.1 - 0.039 13.7 0.0 1.1 9.0 0.0 2.5 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 RKO89574.1 - 0.073 13.0 0.1 21 5.0 0.0 3.0 3 0 0 3 3 2 0 NACHT domain Rad17 PF03215.15 RKO89574.1 - 0.08 12.9 0.0 13 5.6 0.0 2.6 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_24 PF13479.6 RKO89574.1 - 0.12 12.0 0.0 16 5.1 0.0 2.7 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 RKO89574.1 - 0.21 11.5 2.2 8.6 6.3 0.0 2.9 3 0 0 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_23 PF13476.6 RKO89574.1 - 0.44 11.0 12.7 17 5.9 0.0 4.8 5 0 0 5 5 5 0 AAA domain DUF4472 PF14739.6 RKO89574.1 - 0.69 10.7 14.2 1.1 10.0 1.1 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4472) AAA_11 PF13086.6 RKO89574.1 - 0.83 9.4 0.0 0.83 9.4 0.0 3.5 3 0 0 3 3 3 0 AAA domain Spc7 PF08317.11 RKO89574.1 - 1.4 7.7 31.0 0.046 12.6 10.4 3.1 3 0 0 3 3 3 0 Spc7 kinetochore protein Cyt-b5 PF00173.28 RKO89575.1 - 1.1e-21 76.8 0.1 1.2e-21 76.6 0.1 1.0 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain EBP PF05241.12 RKO89576.1 - 1.2e-54 184.4 11.1 1.5e-54 184.2 11.1 1.0 1 0 0 1 1 1 1 Emopamil binding protein Muted PF14942.6 RKO89577.1 - 0.0083 16.5 5.6 0.0083 16.5 5.6 1.9 2 0 0 2 2 2 1 Organelle biogenesis, Muted-like protein Fez1 PF06818.15 RKO89577.1 - 0.15 12.5 16.3 0.3 11.5 16.3 1.5 1 0 0 1 1 1 0 Fez1 DUF16 PF01519.16 RKO89577.1 - 4 8.0 8.2 0.53 10.8 3.7 1.8 2 0 0 2 2 2 0 Protein of unknown function DUF16 PHTB1_C PF14728.6 RKO89578.1 - 2.1e-19 69.9 0.0 1.2e-11 44.4 0.0 2.1 1 1 1 2 2 2 2 PTHB1 C-terminus zf-HC2 PF13490.6 RKO89585.1 - 0.067 13.5 0.3 0.1 12.9 0.3 1.3 1 0 0 1 1 1 0 Putative zinc-finger DUF1929 PF09118.11 RKO89589.1 - 9.3e-21 73.9 0.0 2e-20 72.9 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1929) Glyoxal_oxid_N PF07250.11 RKO89589.1 - 9e-13 48.0 0.7 3.5e-10 39.5 0.9 3.8 2 1 0 2 2 2 1 Glyoxal oxidase N-terminus Kelch_3 PF13415.6 RKO89589.1 - 0.18 12.1 1.5 8.2 6.8 0.1 3.9 3 0 0 3 3 3 0 Galactose oxidase, central domain Med12 PF09497.10 RKO89590.1 - 2.7e-17 62.8 0.7 1.6e-16 60.3 0.1 2.9 3 0 0 3 3 3 1 Transcription mediator complex subunit Med12 Med12-LCEWAV PF12145.8 RKO89590.1 - 1.2e-08 34.2 0.0 2.6e-08 33.2 0.0 1.4 1 0 0 1 1 1 1 Eukaryotic Mediator 12 subunit domain WD40 PF00400.32 RKO89595.1 - 0.021 15.7 0.0 0.36 11.8 0.0 3.0 2 1 1 3 3 3 0 WD domain, G-beta repeat NAT PF04768.13 RKO89596.1 - 1.9e-47 161.1 0.0 3.7e-47 160.2 0.0 1.5 1 0 0 1 1 1 1 NAT, N-acetyltransferase, of N-acetylglutamate synthase AA_kinase PF00696.28 RKO89596.1 - 4.1e-28 98.6 0.3 1.8e-27 96.5 0.1 2.0 2 0 0 2 2 2 1 Amino acid kinase family Semialdhyde_dh PF01118.24 RKO89596.1 - 2.8e-25 89.1 0.0 6.9e-25 87.8 0.0 1.7 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 RKO89596.1 - 1.6e-10 41.4 0.0 2.8e-10 40.6 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain DapB_N PF01113.20 RKO89596.1 - 0.018 15.2 0.0 0.051 13.7 0.0 1.8 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Hist_deacetyl PF00850.19 RKO89597.1 - 4.9e-82 275.9 0.1 7.6e-82 275.2 0.1 1.3 1 0 0 1 1 1 1 Histone deacetylase domain 3HCDH_N PF02737.18 RKO89599.1 - 3.5e-60 203.0 2.7 4.3e-60 202.7 2.7 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 RKO89599.1 - 6.2e-36 122.9 0.0 1.2e-35 122.0 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 2-Hacid_dh_C PF02826.19 RKO89599.1 - 0.016 14.6 0.0 0.024 14.0 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.16 RKO89599.1 - 0.041 13.5 0.1 0.087 12.5 0.1 1.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.15 RKO89599.1 - 0.075 13.2 0.4 0.19 11.9 0.4 1.7 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Sacchrp_dh_NADP PF03435.18 RKO89599.1 - 0.089 13.1 0.2 0.17 12.2 0.2 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Methyltransf_28 PF02636.17 RKO89600.1 - 0.095 12.3 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase UPF0160 PF03690.13 RKO89601.1 - 7.3e-107 357.7 0.0 8.4e-107 357.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0160) Cucumo_2B PF03263.13 RKO89601.1 - 0.068 13.6 0.0 2.3 8.7 0.0 2.4 2 0 0 2 2 2 0 Cucumovirus protein 2B GTP_CH_N PF12471.8 RKO89601.1 - 0.16 11.7 0.0 0.38 10.5 0.0 1.6 2 0 0 2 2 2 0 GTP cyclohydrolase N terminal D123 PF07065.14 RKO89602.1 - 5.5e-19 68.5 0.0 6.4e-19 68.2 0.0 1.0 1 0 0 1 1 1 1 D123 Peptidase_M24 PF00557.24 RKO89603.1 - 3.3e-19 69.4 0.0 5.4e-19 68.7 0.0 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 Sec1 PF00995.23 RKO89604.1 - 3.6e-65 221.3 0.0 4.3e-65 221.0 0.0 1.1 1 0 0 1 1 1 1 Sec1 family Sulf_coat_C PF12193.8 RKO89604.1 - 0.038 14.0 0.0 0.15 12.2 0.0 2.0 3 0 0 3 3 3 0 Sulfolobus virus coat protein C terminal JAB PF01398.21 RKO89605.1 - 4.6e-14 52.4 0.0 5.3e-14 52.2 0.0 1.0 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Prok-JAB PF14464.6 RKO89605.1 - 3.6e-07 30.0 0.0 4.6e-07 29.6 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain rRNA_processing PF08524.11 RKO89607.1 - 1.2e-13 51.4 1.0 1.7e-13 50.8 1.0 1.2 1 0 0 1 1 1 1 rRNA processing ABC_tran PF00005.27 RKO89607.1 - 7.6e-05 23.2 0.0 0.0001 22.8 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 RKO89607.1 - 0.00013 22.4 0.0 0.00016 22.1 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain NACHT PF05729.12 RKO89607.1 - 0.0033 17.4 0.0 0.0046 16.9 0.0 1.3 1 0 0 1 1 1 1 NACHT domain RsgA_GTPase PF03193.16 RKO89607.1 - 0.0039 17.1 0.0 0.0047 16.9 0.0 1.3 1 1 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 RKO89607.1 - 0.004 17.4 0.0 0.0055 17.0 0.0 1.4 1 1 0 1 1 1 1 AAA domain PRK PF00485.18 RKO89607.1 - 0.0058 16.4 0.2 0.012 15.3 0.2 1.6 1 1 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_24 PF13479.6 RKO89607.1 - 0.01 15.6 0.0 0.02 14.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 RKO89607.1 - 0.01 16.4 0.0 0.015 15.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain Roc PF08477.13 RKO89607.1 - 0.029 14.6 0.0 0.046 13.9 0.0 1.4 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_7 PF12775.7 RKO89607.1 - 0.029 13.9 0.0 0.073 12.6 0.0 1.5 1 1 1 2 2 2 0 P-loop containing dynein motor region MMR_HSR1 PF01926.23 RKO89607.1 - 0.037 14.1 0.0 0.088 12.9 0.0 1.6 1 1 1 2 2 2 0 50S ribosome-binding GTPase TniB PF05621.11 RKO89607.1 - 0.038 13.4 0.0 0.043 13.2 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein Dynamin_N PF00350.23 RKO89607.1 - 0.043 13.9 0.0 0.054 13.5 0.0 1.1 1 0 0 1 1 1 0 Dynamin family AAA_28 PF13521.6 RKO89607.1 - 0.063 13.5 0.3 0.11 12.8 0.3 1.4 1 1 0 1 1 1 0 AAA domain TsaE PF02367.17 RKO89607.1 - 0.093 12.7 0.0 0.13 12.3 0.0 1.4 1 1 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 RKO89607.1 - 0.12 12.8 0.0 0.15 12.5 0.0 1.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) GFD1 PF17331.2 RKO89607.1 - 0.17 12.1 2.7 0.47 10.7 2.7 1.7 1 0 0 1 1 1 0 GFD1 mRNA transport factor AA_permease_2 PF13520.6 RKO89608.1 - 1.8e-47 162.2 45.2 2.2e-47 161.9 45.2 1.1 1 0 0 1 1 1 1 Amino acid permease PDCD9 PF07147.12 RKO89608.1 - 0.15 11.2 0.0 0.21 10.7 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S30 (PDCD9) YqzM PF14141.6 RKO89608.1 - 0.87 9.7 4.0 0.7 10.0 1.1 2.4 2 0 0 2 2 2 0 YqzM-like protein Dynamin_N PF00350.23 RKO89610.1 - 2.7e-07 30.8 2.2 4.6e-07 30.0 0.1 2.3 3 1 0 3 3 3 1 Dynamin family AIG1 PF04548.16 RKO89610.1 - 2e-05 24.0 0.1 0.0013 18.1 0.0 2.4 2 0 0 2 2 2 2 AIG1 family MMR_HSR1 PF01926.23 RKO89610.1 - 7.9e-05 22.7 1.5 0.00086 19.4 1.5 2.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase MMR_HSR1 PF01926.23 RKO89611.1 - 0.0042 17.1 0.1 0.16 12.1 0.0 2.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase AIG1 PF04548.16 RKO89611.1 - 0.012 14.9 0.1 0.042 13.2 0.0 1.9 2 0 0 2 2 2 0 AIG1 family Glyco_tranf_2_4 PF13704.6 RKO89611.1 - 0.067 13.7 0.0 1.1 9.8 0.0 2.6 2 0 0 2 2 2 0 Glycosyl transferase family 2 ABC_tran_CTD PF16326.5 RKO89611.1 - 0.087 13.1 0.9 0.32 11.3 0.9 1.9 1 0 0 1 1 1 0 ABC transporter C-terminal domain HNH PF01844.23 RKO89611.1 - 0.16 12.2 1.3 0.43 10.8 0.1 2.4 3 0 0 3 3 3 0 HNH endonuclease Dynamin_N PF00350.23 RKO89611.1 - 0.17 12.0 0.1 2.2 8.3 0.0 2.4 2 0 0 2 2 2 0 Dynamin family Oxidored_FMN PF00724.20 RKO89612.1 - 2.7e-62 211.0 0.0 3.1e-62 210.8 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family CBM_25 PF03423.13 RKO89612.1 - 0.0057 16.9 0.0 0.013 15.7 0.0 1.6 1 0 0 1 1 1 1 Carbohydrate binding domain (family 25) Oxidored_FMN PF00724.20 RKO89613.1 - 1.2e-62 212.2 0.0 1.4e-62 212.0 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family CBM_25 PF03423.13 RKO89613.1 - 0.044 14.0 0.0 0.1 12.8 0.0 1.6 1 0 0 1 1 1 0 Carbohydrate binding domain (family 25) p25-alpha PF05517.12 RKO89614.1 - 2.1e-20 73.5 6.7 9.3e-12 45.4 0.2 2.5 2 1 0 2 2 2 2 p25-alpha Acetyltransf_3 PF13302.7 RKO89615.1 - 6.3e-15 56.1 0.0 1.1e-14 55.2 0.0 1.4 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 RKO89615.1 - 4.7e-09 36.5 0.0 6.7e-09 36.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Adeno_PIX PF03955.14 RKO89615.1 - 0.036 14.2 0.3 0.062 13.5 0.3 1.3 1 0 0 1 1 1 0 Adenovirus hexon-associated protein (IX) TPR_1 PF00515.28 RKO89618.1 - 1.2e-09 37.5 0.0 0.0011 18.7 0.0 2.0 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 RKO89618.1 - 1.3e-07 31.2 0.0 3.4e-07 29.8 0.0 1.6 2 0 0 2 2 2 1 TPR repeat TPR_2 PF07719.17 RKO89618.1 - 1.9e-07 30.7 0.0 0.014 15.5 0.0 2.0 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 RKO89618.1 - 0.00019 21.5 0.0 0.0005 20.3 0.0 1.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO89618.1 - 0.0059 17.2 0.0 0.0081 16.8 0.0 1.3 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO89618.1 - 0.037 14.9 0.0 0.075 13.9 0.0 1.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 RKO89618.1 - 0.063 13.5 0.1 1.7 9.1 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO89618.1 - 0.1 12.8 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 Histone PF00125.24 RKO89619.1 - 6.5e-52 175.4 2.7 7.2e-52 175.2 2.7 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 RKO89619.1 - 3.3e-05 24.0 0.4 5.6e-05 23.2 0.1 1.6 2 0 0 2 2 2 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 RKO89619.1 - 3.9e-05 23.9 0.0 6e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 CENP-S protein PAF PF15715.5 RKO89619.1 - 0.00017 22.2 1.3 0.00021 21.9 1.3 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CBFD_NFYB_HMF PF00808.23 RKO89619.1 - 0.0096 16.2 0.1 0.019 15.3 0.1 1.5 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 RKO89619.1 - 0.12 12.4 0.2 0.22 11.6 0.1 1.5 2 0 0 2 2 2 0 Transcription initiation factor IID, 31kD subunit CENP-T_C PF15511.6 RKO89620.1 - 1.4e-08 34.9 0.1 1.6e-08 34.6 0.1 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TAF PF02969.17 RKO89620.1 - 6.5e-05 23.0 0.1 9.6e-05 22.5 0.1 1.4 1 1 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.6 RKO89620.1 - 8.1e-05 22.9 0.1 0.00011 22.5 0.1 1.3 1 1 0 1 1 1 1 CENP-S protein Histone PF00125.24 RKO89620.1 - 0.00017 22.0 0.2 0.00019 21.8 0.2 1.3 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 RKO89620.1 - 0.0002 21.6 0.1 0.00039 20.7 0.1 1.6 1 1 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 RKO89620.1 - 0.012 15.7 0.0 0.013 15.5 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Bromo_TP PF07524.13 RKO89620.1 - 0.016 15.2 0.0 0.024 14.6 0.0 1.3 1 0 0 1 1 1 0 Bromodomain associated UPF0137 PF03677.13 RKO89620.1 - 0.038 13.8 0.2 0.047 13.5 0.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0137) TFIID_20kDa PF03847.13 RKO89620.1 - 0.1 13.1 0.0 0.19 12.2 0.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A RNA_pol_Rpb2_2 PF04561.14 RKO89622.1 - 1.2e-12 47.8 0.0 1.8e-12 47.3 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 ERCC3_RAD25_C PF16203.5 RKO89624.1 - 6.9e-48 163.0 0.0 2.6e-19 69.4 0.0 3.1 2 1 1 3 3 3 3 ERCC3/RAD25/XPB C-terminal helicase Helicase_C PF00271.31 RKO89624.1 - 2.4e-06 27.8 0.0 6.6e-06 26.4 0.0 1.7 1 1 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 RKO89625.1 - 1e-73 247.6 0.0 1.8e-56 191.1 0.0 2.3 1 1 1 2 2 2 2 ERCC3/RAD25/XPB C-terminal helicase Helicase_C_3 PF13625.6 RKO89625.1 - 2.7e-24 85.7 0.0 5.8e-24 84.7 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO89625.1 - 2.9e-17 63.2 0.0 5.7e-17 62.2 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.23 RKO89625.1 - 8.2e-09 34.6 0.0 1.1e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain DEAD PF00270.29 RKO89625.1 - 1.2e-08 35.0 0.0 3.2e-08 33.5 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO89625.1 - 1.4e-07 31.8 0.0 1.2e-06 28.8 0.1 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain AAA_34 PF13872.6 RKO89625.1 - 0.063 12.2 0.1 0.1 11.5 0.1 1.3 1 0 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 Erg28 PF03694.13 RKO89626.1 - 4.2e-35 120.5 2.3 5.9e-35 120.0 2.3 1.2 1 0 0 1 1 1 1 Erg28 like protein adh_short PF00106.25 RKO89627.1 - 3.9e-05 23.2 0.0 0.013 15.0 0.0 2.2 2 0 0 2 2 2 2 short chain dehydrogenase Homeodomain PF00046.29 RKO89628.1 - 1.6e-18 66.3 2.6 1.7e-18 66.2 2.6 1.0 1 0 0 1 1 1 1 Homeodomain Homez PF11569.8 RKO89628.1 - 0.0019 17.6 0.0 0.002 17.5 0.0 1.2 1 0 0 1 1 1 1 Homeodomain leucine-zipper encoding, Homez Homeobox_KN PF05920.11 RKO89628.1 - 0.0096 15.8 0.2 0.017 15.0 0.2 1.4 1 0 0 1 1 1 1 Homeobox KN domain RNase_H PF00075.24 RKO89628.1 - 0.043 14.0 0.0 0.043 14.0 0.0 1.0 1 0 0 1 1 1 0 RNase H CBS PF00571.28 RKO89629.1 - 1.7e-20 73.2 4.3 1.2e-09 38.4 0.1 4.4 4 0 0 4 4 4 4 CBS domain Homeodomain PF00046.29 RKO89630.1 - 4.4e-16 58.5 2.3 4.8e-16 58.3 2.3 1.0 1 0 0 1 1 1 1 Homeodomain Homez PF11569.8 RKO89630.1 - 0.061 12.8 0.0 0.064 12.7 0.0 1.2 1 0 0 1 1 1 0 Homeodomain leucine-zipper encoding, Homez SNF2_N PF00176.23 RKO89631.1 - 3.2e-50 170.8 0.0 4.8e-50 170.2 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 RKO89631.1 - 1.3e-08 35.1 0.6 2.2e-08 34.4 0.6 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 RKO89631.1 - 3.1e-05 23.3 0.4 5.1e-05 22.6 0.4 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Ank_5 PF13857.6 RKO89632.1 - 2.3e-07 30.9 2.1 0.17 12.3 0.0 4.0 2 2 2 4 4 4 3 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO89632.1 - 3.8e-07 30.5 2.2 0.0019 18.7 0.0 3.6 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO89632.1 - 6.7e-06 26.6 0.8 0.00047 20.7 0.0 2.4 1 1 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO89632.1 - 3.9e-05 23.7 0.2 1.5 9.7 0.0 3.8 3 0 0 3 3 3 2 Ankyrin repeat VHL_C PF17211.3 RKO89632.1 - 0.087 12.8 0.0 8.5 6.5 0.0 2.7 2 0 0 2 2 2 0 VHL box domain Kinesin PF00225.23 RKO89634.1 - 3.2e-08 32.9 0.0 3.3e-08 32.8 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO89634.1 - 0.0015 18.5 0.0 0.0017 18.3 0.0 1.0 1 0 0 1 1 1 1 Microtubule binding SeleniumBinding PF11524.8 RKO89634.1 - 0.054 13.9 0.0 0.066 13.6 0.0 1.0 1 0 0 1 1 1 0 Selenium binding protein Kinesin PF00225.23 RKO89635.1 - 4.7e-19 68.5 0.0 4.7e-19 68.5 0.0 1.6 2 0 0 2 2 2 1 Kinesin motor domain SlyX PF04102.12 RKO89635.1 - 1.8 9.2 9.5 14 6.3 0.6 3.6 3 0 0 3 3 3 0 SlyX DUF3449 PF11931.8 RKO89636.1 - 7.1e-47 159.6 0.5 7.7e-47 159.5 0.5 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3449) zf-met PF12874.7 RKO89636.1 - 0.012 16.0 0.1 0.018 15.4 0.1 1.3 1 0 0 1 1 1 0 Zinc-finger of C2H2 type MRC1 PF09444.10 RKO89637.1 - 0.021 15.4 4.2 0.026 15.0 4.2 1.2 1 0 0 1 1 1 0 MRC1-like domain HNH_2 PF13391.6 RKO89639.1 - 0.03 14.4 0.0 0.067 13.3 0.0 1.6 1 0 0 1 1 1 0 HNH endonuclease GST_N_5 PF18485.1 RKO89640.1 - 0.031 14.6 0.4 0.097 13.0 0.1 2.0 2 0 0 2 2 2 0 Glutathione S-transferase, N-terminal domain Glyco_transf_28 PF03033.20 RKO89640.1 - 0.034 14.2 0.1 0.51 10.4 0.0 2.1 2 0 0 2 2 2 0 Glycosyltransferase family 28 N-terminal domain zf-C3HC4_3 PF13920.6 RKO89642.1 - 4e-09 36.2 8.1 7.3e-09 35.3 8.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO89642.1 - 5.9e-09 35.7 11.7 1.1e-08 34.7 11.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 RKO89642.1 - 1.6e-07 31.2 6.8 3.1e-07 30.3 6.8 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_6 PF14835.6 RKO89642.1 - 3.4e-07 30.0 2.5 6.6e-07 29.1 2.5 1.5 1 0 0 1 1 1 1 zf-RING of BARD1-type protein zf-C3HC4_2 PF13923.6 RKO89642.1 - 7.4e-07 28.9 12.0 1.5e-06 27.9 12.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 RKO89642.1 - 2.6e-06 27.2 7.6 4.8e-06 26.3 7.6 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 RKO89642.1 - 2.7e-06 27.6 9.7 4.9e-06 26.8 9.7 1.5 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 RKO89642.1 - 1.2e-05 25.2 11.0 1.2e-05 25.2 11.0 1.7 2 0 0 2 2 1 1 zinc-RING finger domain zf-rbx1 PF12678.7 RKO89642.1 - 0.00075 19.7 6.3 0.0019 18.4 6.3 1.8 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_4 PF15227.6 RKO89642.1 - 0.0009 19.4 8.8 0.0019 18.3 8.8 1.6 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING MPS2 PF17060.5 RKO89642.1 - 0.0018 17.6 11.9 0.0022 17.3 11.9 1.1 1 0 0 1 1 1 1 Monopolar spindle protein 2 APG6_N PF17675.1 RKO89642.1 - 0.0036 17.8 10.1 0.0036 17.8 10.1 2.6 2 1 1 3 3 2 1 Apg6 coiled-coil region BRE1 PF08647.11 RKO89642.1 - 0.0081 16.2 6.3 0.0081 16.2 6.3 2.8 1 1 1 2 2 2 1 BRE1 E3 ubiquitin ligase Fez1 PF06818.15 RKO89642.1 - 0.0089 16.5 13.2 0.012 16.1 13.2 1.4 1 0 0 1 1 1 1 Fez1 zf-RING_4 PF14570.6 RKO89642.1 - 0.019 14.7 8.3 0.047 13.5 8.3 1.7 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain CorA PF01544.18 RKO89642.1 - 0.021 14.1 6.9 0.026 13.8 6.9 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein IFT57 PF10498.9 RKO89642.1 - 0.035 13.1 17.1 0.027 13.5 11.9 2.0 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Spc7 PF08317.11 RKO89642.1 - 0.048 12.5 17.9 0.075 11.9 17.9 1.3 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF1272 PF06906.11 RKO89642.1 - 0.067 13.3 6.6 0.17 12.0 6.6 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) zf-Nse PF11789.8 RKO89642.1 - 0.077 12.8 3.8 0.16 11.8 3.8 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit HrpB7 PF09486.10 RKO89642.1 - 0.092 13.1 16.1 0.58 10.5 16.1 2.0 1 1 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) DUF4201 PF13870.6 RKO89642.1 - 0.097 12.4 19.6 0.33 10.7 16.9 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) Lebercilin PF15619.6 RKO89642.1 - 0.1 12.2 24.1 0.27 10.9 24.2 1.6 1 1 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease BST2 PF16716.5 RKO89642.1 - 0.11 13.1 19.2 1.4 9.6 6.6 2.5 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 DUF16 PF01519.16 RKO89642.1 - 0.15 12.6 21.3 1.7 9.2 4.5 3.0 1 1 2 3 3 3 0 Protein of unknown function DUF16 zf-C3HC4_5 PF17121.5 RKO89642.1 - 0.17 11.8 7.6 0.5 10.3 7.6 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) TMF_TATA_bd PF12325.8 RKO89642.1 - 0.21 11.8 17.3 0.04 14.1 8.9 2.4 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Tropomyosin_1 PF12718.7 RKO89642.1 - 0.3 11.2 21.2 3.3 7.8 21.2 2.1 1 1 0 1 1 1 0 Tropomyosin like HydF_tetramer PF18133.1 RKO89642.1 - 0.32 10.8 5.0 0.78 9.5 0.6 2.8 2 1 1 3 3 3 0 Hydrogen maturase F tetramerization domain Laminin_II PF06009.12 RKO89642.1 - 0.37 10.8 17.4 0.04 13.9 7.9 2.1 1 1 1 2 2 2 0 Laminin Domain II Transcrip_act PF04949.13 RKO89642.1 - 0.38 10.6 15.5 0.098 12.5 8.8 2.0 1 1 1 2 2 2 0 Transcriptional activator DUF5320 PF17253.2 RKO89642.1 - 0.43 11.7 8.5 0.92 10.6 1.9 2.4 2 1 0 2 2 2 0 Family of unknown function (DUF5320) DUF724 PF05266.14 RKO89642.1 - 0.43 10.4 19.6 1 9.2 7.5 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF724) DUF4407 PF14362.6 RKO89642.1 - 0.53 9.6 13.7 0.83 8.9 13.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Gp-FAR-1 PF05823.12 RKO89642.1 - 0.59 10.5 15.4 3.4 8.0 1.2 3.1 1 1 2 3 3 3 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) DUF1664 PF07889.12 RKO89642.1 - 0.87 9.6 13.7 1.2 9.2 4.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Vps5 PF09325.10 RKO89642.1 - 1 8.8 15.9 0.21 11.1 6.1 2.6 1 1 2 3 3 3 0 Vps5 C terminal like V_ATPase_I PF01496.19 RKO89642.1 - 1.2 6.9 9.7 1.5 6.7 9.7 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family YscO PF07321.12 RKO89642.1 - 1.5 8.8 23.4 3.4 7.6 11.8 2.3 1 1 1 2 2 2 0 Type III secretion protein YscO bZIP_Maf PF03131.17 RKO89642.1 - 1.6 9.3 20.8 2 9.0 8.3 2.6 1 1 0 2 2 2 0 bZIP Maf transcription factor TRAF_BIRC3_bd PF16673.5 RKO89642.1 - 1.6 8.5 12.7 6 6.7 2.4 3.0 1 1 2 3 3 3 0 TNF receptor-associated factor BIRC3 binding domain E2F_CC-MB PF16421.5 RKO89642.1 - 1.7 9.1 11.9 3 8.3 2.9 2.8 2 1 1 3 3 3 0 E2F transcription factor CC-MB domain Lectin_N PF03954.14 RKO89642.1 - 1.8 8.3 15.4 3 7.6 6.2 2.1 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain ATG16 PF08614.11 RKO89642.1 - 2.6 8.2 23.8 3.9 7.7 23.8 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) Prefoldin PF02996.17 RKO89642.1 - 3.6 7.5 20.2 3.6 7.5 1.4 3.4 2 1 1 3 3 3 0 Prefoldin subunit CLZ PF16526.5 RKO89642.1 - 3.6 8.0 18.1 2.7 8.4 2.4 3.4 1 1 2 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Exonuc_VII_L PF02601.15 RKO89642.1 - 3.7 7.0 16.4 1.3 8.6 13.3 1.8 2 0 0 2 2 2 0 Exonuclease VII, large subunit zf-RING_11 PF17123.5 RKO89642.1 - 4.4 7.2 8.3 8 6.3 7.3 2.1 2 0 0 2 2 1 0 RING-like zinc finger Fmp27_WPPW PF10359.9 RKO89642.1 - 4.6 6.0 15.7 6.9 5.4 15.1 1.5 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain UPF0242 PF06785.11 RKO89642.1 - 5.2 7.1 22.2 13 5.8 9.2 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus LMBR1 PF04791.16 RKO89642.1 - 5.8 5.7 10.5 6.9 5.5 10.5 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein GAS PF13851.6 RKO89642.1 - 6.8 6.0 24.4 2.3 7.5 8.0 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding NPV_P10 PF05531.12 RKO89642.1 - 7.3 7.1 14.6 21 5.7 3.7 3.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein XhlA PF10779.9 RKO89642.1 - 7.6 6.8 13.9 8.5 6.7 0.2 3.3 1 1 1 3 3 3 0 Haemolysin XhlA zf-H2C2_2 PF13465.6 RKO89642.1 - 8.4 7.0 10.5 1.3 9.6 0.3 2.8 2 1 0 2 2 2 0 Zinc-finger double domain DUF4379 PF14311.6 RKO89642.1 - 9.7 6.6 8.0 1.1 9.6 1.2 2.4 1 1 1 2 2 1 0 Probable Zinc-ribbon domain Iwr1 PF08574.10 RKO89643.1 - 0.00024 22.1 25.4 0.0012 19.8 9.7 3.1 2 2 0 2 2 2 2 Transcription factor Iwr1 NA37 PF04245.13 RKO89643.1 - 0.054 13.0 0.3 0.08 12.4 0.3 1.3 1 0 0 1 1 1 0 37-kD nucleoid-associated bacterial protein Trypsin_2 PF13365.6 RKO89645.1 - 3.4e-23 83.2 0.5 5.7e-17 63.0 0.2 2.7 2 1 0 2 2 2 2 Trypsin-like peptidase domain Trypsin PF00089.26 RKO89645.1 - 0.034 14.0 0.0 0.087 12.6 0.0 1.7 1 1 0 1 1 1 0 Trypsin Coatomer_b_Cpla PF14806.6 RKO89647.1 - 1.1e-56 190.3 0.5 7.5e-56 187.6 0.5 2.2 1 1 0 1 1 1 1 Coatomer beta subunit appendage platform Coatamer_beta_C PF07718.12 RKO89647.1 - 0.0011 18.9 1.4 0.0026 17.7 0.4 2.1 2 0 0 2 2 2 1 Coatomer beta C-terminal region WPP PF13943.6 RKO89647.1 - 0.016 15.6 2.4 0.04 14.3 1.8 1.9 1 1 1 2 2 2 0 WPP domain Zip PF02535.22 RKO89648.1 - 4.6e-40 137.8 12.3 4.6e-40 137.8 12.3 2.0 2 1 0 2 2 2 1 ZIP Zinc transporter Beta-lactamase PF00144.24 RKO89650.1 - 3e-32 112.2 0.7 5.5e-32 111.3 0.3 1.6 2 0 0 2 2 2 1 Beta-lactamase Beta-lactamase2 PF13354.6 RKO89650.1 - 0.015 14.9 0.0 0.031 13.9 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase enzyme family Ifi-6-16 PF06140.13 RKO89651.1 - 3.1e-06 27.0 9.0 4.1e-06 26.6 8.9 1.3 1 1 0 1 1 1 1 Interferon-induced 6-16 family Kelch_5 PF13854.6 RKO89652.1 - 1.4e-09 37.7 0.6 0.059 13.4 0.0 3.4 3 0 0 3 3 3 3 Kelch motif Kelch_1 PF01344.25 RKO89652.1 - 2e-08 33.7 0.2 0.004 16.7 0.0 3.4 3 0 0 3 3 3 2 Kelch motif Kelch_4 PF13418.6 RKO89652.1 - 2.3e-06 27.5 1.0 0.054 13.5 0.0 3.0 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO89652.1 - 2.7e-06 27.4 1.4 0.02 15.2 0.0 3.1 3 1 0 3 3 3 2 Kelch motif Kelch_2 PF07646.15 RKO89652.1 - 4.3e-05 23.3 1.0 2.4 8.3 0.0 3.4 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 RKO89652.1 - 5.7e-05 23.3 2.3 0.77 10.1 0.0 3.5 4 0 0 4 4 4 2 Galactose oxidase, central domain TEA PF01285.18 RKO89653.1 - 0.015 15.4 0.0 29 4.8 0.0 3.2 3 0 0 3 3 3 0 TEA/ATTS domain HutD PF05962.11 RKO89656.1 - 9.8e-24 84.3 0.0 9e-21 74.7 0.0 2.9 2 1 0 2 2 2 1 HutD Cupin_6 PF12852.7 RKO89656.1 - 0.072 12.8 0.1 0.14 11.9 0.1 1.4 1 0 0 1 1 1 0 Cupin Hyccin PF09790.9 RKO89656.1 - 0.2 10.7 0.5 0.32 10.0 0.5 1.2 1 0 0 1 1 1 0 Hyccin PAP_PilO PF06864.12 RKO89657.1 - 0.79 8.5 2.7 0.95 8.2 2.7 1.1 1 0 0 1 1 1 0 Pilin accessory protein (PilO) RhoGEF PF00621.20 RKO89658.1 - 2.2e-05 24.8 0.0 7.3e-05 23.1 0.0 1.9 2 0 0 2 2 2 1 RhoGEF domain DUF5101 PF17031.5 RKO89658.1 - 0.15 12.2 0.0 0.34 11.0 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5101) AdoHcyase PF05221.17 RKO89660.1 - 4.1e-137 456.3 0.0 1.6e-74 250.7 0.1 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 RKO89660.1 - 8e-87 289.4 4.0 1.2e-86 288.7 4.0 1.3 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 RKO89660.1 - 2.9e-09 36.5 0.2 5.5e-09 35.6 0.2 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 RKO89660.1 - 4.8e-06 26.2 0.1 8.2e-06 25.5 0.1 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain THF_DHG_CYH_C PF02882.19 RKO89660.1 - 0.021 14.1 1.1 0.12 11.7 1.1 2.1 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ELFV_dehydrog PF00208.21 RKO89660.1 - 0.17 11.6 1.4 0.17 11.6 0.2 1.6 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Acyl_transf_3 PF01757.22 RKO89661.1 - 3.6e-13 49.3 41.9 3.6e-13 49.3 41.9 2.1 2 1 0 2 2 2 1 Acyltransferase family Acyl_transf_3 PF01757.22 RKO89662.1 - 7 5.6 33.5 0.53 9.3 26.6 2.3 1 1 1 2 2 2 0 Acyltransferase family Yip1 PF04893.17 RKO89663.1 - 8.2e-08 32.2 11.8 1.1e-07 31.7 11.8 1.2 1 0 0 1 1 1 1 Yip1 domain DUF2070 PF09843.9 RKO89663.1 - 3.1 6.0 7.6 3.6 5.7 7.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) 2OG-FeII_Oxy PF03171.20 RKO89664.1 - 0.033 14.7 0.0 0.054 14.0 0.0 1.4 1 1 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily Fungal_trans PF04082.18 RKO89665.1 - 1.5e-12 47.1 0.1 1.7e-12 46.9 0.1 1.0 1 0 0 1 1 1 1 Fungal specific transcription factor domain PIF1 PF05970.14 RKO89666.1 - 1.3e-25 90.4 0.0 1.3e-19 70.6 0.0 4.0 3 1 1 4 4 4 3 PIF1-like helicase AAA_30 PF13604.6 RKO89666.1 - 1.2e-06 28.4 0.0 0.02 14.6 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.6 RKO89666.1 - 0.16 12.3 0.0 0.41 11.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain PIF1 PF05970.14 RKO89667.1 - 2.2e-16 60.0 0.0 3.1e-16 59.5 0.0 1.1 1 0 0 1 1 1 1 PIF1-like helicase AAA_30 PF13604.6 RKO89667.1 - 0.0014 18.4 0.0 0.0024 17.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain Cmc1 PF08583.10 RKO89668.1 - 5.1e-05 23.2 0.7 6.9e-05 22.8 0.7 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase biogenesis protein Cmc1 like UPF0203 PF05254.12 RKO89668.1 - 0.00071 19.8 0.5 0.13 12.6 0.3 2.1 2 0 0 2 2 2 2 Uncharacterised protein family (UPF0203) Complex1_LYR_2 PF13233.6 RKO89668.1 - 0.0039 17.9 0.0 0.004 17.9 0.0 1.1 1 0 0 1 1 1 1 Complex1_LYR-like Mitochondr_Som1 PF11093.8 RKO89670.1 - 6.4e-05 22.9 0.0 0.00011 22.1 0.0 1.4 1 1 0 1 1 1 1 Mitochondrial export protein Som1 AAA PF00004.29 RKO89671.1 - 1e-96 320.4 0.0 3.4e-49 166.7 0.0 2.2 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 RKO89671.1 - 3.6e-17 61.9 0.4 9e-11 41.4 0.0 3.1 3 0 0 3 3 3 2 AAA+ lid domain RuvB_N PF05496.12 RKO89671.1 - 2.3e-15 56.7 0.0 4.3e-07 29.8 0.0 3.0 3 0 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 RKO89671.1 - 3.1e-13 50.5 0.9 0.0011 19.4 0.0 4.4 2 2 2 4 4 4 2 AAA ATPase domain AAA_2 PF07724.14 RKO89671.1 - 1.5e-11 44.7 0.0 0.00024 21.2 0.0 2.5 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 RKO89671.1 - 3.7e-11 43.4 0.7 0.0078 16.5 0.0 4.5 3 2 1 4 4 3 2 AAA domain AAA_5 PF07728.14 RKO89671.1 - 8e-10 38.9 1.3 0.0027 17.7 0.1 4.2 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 RKO89671.1 - 2.2e-09 37.6 0.0 0.0016 18.6 0.0 2.5 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 RKO89671.1 - 5.5e-09 35.7 0.2 0.00012 21.4 0.1 2.5 2 1 1 3 3 3 2 TIP49 P-loop domain AAA_14 PF13173.6 RKO89671.1 - 4.7e-08 33.1 0.0 0.0057 16.7 0.0 2.3 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 RKO89671.1 - 6.9e-08 32.8 0.0 0.017 15.5 0.0 2.9 2 1 0 2 2 2 2 RNA helicase AAA_25 PF13481.6 RKO89671.1 - 1.2e-07 31.6 1.1 0.56 9.8 0.1 4.2 3 1 1 4 4 4 2 AAA domain NACHT PF05729.12 RKO89671.1 - 1.5e-07 31.5 0.4 0.076 12.9 0.0 3.9 3 1 1 4 4 4 2 NACHT domain ABC_tran PF00005.27 RKO89671.1 - 3.4e-07 30.8 0.0 0.047 14.2 0.0 2.9 2 2 0 2 2 2 2 ABC transporter Mg_chelatase PF01078.21 RKO89671.1 - 4.2e-07 29.6 0.6 0.021 14.2 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 RKO89671.1 - 7.6e-07 29.0 0.1 0.039 13.7 0.0 2.5 2 1 0 2 2 2 2 IstB-like ATP binding protein AAA_28 PF13521.6 RKO89671.1 - 8e-07 29.4 0.0 0.033 14.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain TsaE PF02367.17 RKO89671.1 - 1.2e-06 28.5 0.0 0.06 13.4 0.0 2.3 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 RKO89671.1 - 1.5e-06 28.8 0.0 0.071 13.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain ATPase PF06745.13 RKO89671.1 - 2.3e-06 27.2 0.3 0.6 9.4 0.0 3.3 2 1 1 3 3 3 2 KaiC AAA_3 PF07726.11 RKO89671.1 - 4.3e-06 26.6 0.0 0.02 14.7 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 RKO89671.1 - 1.4e-05 24.9 0.0 0.14 11.8 0.0 3.6 3 1 0 3 3 3 2 Sigma-54 interaction domain Zeta_toxin PF06414.12 RKO89671.1 - 1.5e-05 24.3 0.1 0.079 12.2 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin Rad17 PF03215.15 RKO89671.1 - 2.7e-05 24.2 0.0 0.17 11.8 0.0 2.3 2 0 0 2 2 2 2 Rad17 P-loop domain NB-ARC PF00931.22 RKO89671.1 - 5.3e-05 22.5 0.0 0.15 11.3 0.0 2.5 3 0 0 3 3 2 2 NB-ARC domain ATPase_2 PF01637.18 RKO89671.1 - 5.6e-05 23.2 0.0 0.15 12.0 0.0 3.4 2 2 1 3 3 3 1 ATPase domain predominantly from Archaea AAA_17 PF13207.6 RKO89671.1 - 9.3e-05 22.9 0.0 0.75 10.2 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_7 PF12775.7 RKO89671.1 - 0.00013 21.6 0.0 0.34 10.4 0.0 2.9 2 2 0 2 2 2 2 P-loop containing dynein motor region AAA_11 PF13086.6 RKO89671.1 - 0.00018 21.4 0.0 0.37 10.5 0.0 2.3 2 0 0 2 2 2 2 AAA domain Viral_helicase1 PF01443.18 RKO89671.1 - 0.00018 21.3 0.0 0.18 11.5 0.0 2.2 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase Cytidylate_kin2 PF13189.6 RKO89671.1 - 0.00022 21.4 0.0 0.22 11.6 0.0 2.2 2 0 0 2 2 2 1 Cytidylate kinase-like family Parvo_NS1 PF01057.17 RKO89671.1 - 0.00069 18.8 0.0 0.83 8.7 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 AAA_24 PF13479.6 RKO89671.1 - 0.00076 19.2 0.0 0.25 11.0 0.0 2.4 2 0 0 2 2 2 1 AAA domain PhoH PF02562.16 RKO89671.1 - 0.0014 18.1 0.1 1.5 8.2 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein SKI PF01202.22 RKO89671.1 - 0.0017 18.5 0.0 1.6 8.9 0.0 2.6 2 0 0 2 2 2 1 Shikimate kinase Sigma54_activ_2 PF14532.6 RKO89671.1 - 0.0038 17.3 0.0 2 8.6 0.0 2.6 2 0 0 2 2 2 1 Sigma-54 interaction domain DUF815 PF05673.13 RKO89671.1 - 0.0038 16.4 0.0 0.14 11.3 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF815) Bac_DnaA PF00308.18 RKO89671.1 - 0.0072 16.2 0.1 3.2 7.5 0.0 2.7 2 1 0 2 2 2 1 Bacterial dnaA protein TniB PF05621.11 RKO89671.1 - 0.012 15.0 0.0 25 4.2 0.0 3.4 3 1 0 3 3 3 0 Bacterial TniB protein PduV-EutP PF10662.9 RKO89671.1 - 0.017 14.9 0.0 6.4 6.5 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation NTPase_1 PF03266.15 RKO89671.1 - 0.02 14.8 0.1 10 6.0 0.0 2.7 2 1 0 2 2 2 0 NTPase DUF2075 PF09848.9 RKO89671.1 - 0.029 13.6 0.0 4.3 6.5 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) CPT PF07931.12 RKO89671.1 - 0.049 13.5 0.0 1.1 9.0 0.0 2.3 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_19 PF13245.6 RKO89671.1 - 0.051 13.9 1.4 18 5.7 0.4 3.0 2 1 0 2 2 2 0 AAA domain DAP3 PF10236.9 RKO89671.1 - 0.096 11.8 0.0 6.5 5.8 0.0 2.4 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 AFG1_ATPase PF03969.16 RKO89671.1 - 0.1 11.4 0.1 5.3 5.8 0.0 2.8 3 0 0 3 3 3 0 AFG1-like ATPase SRPRB PF09439.10 RKO89671.1 - 0.13 11.7 0.0 15 4.9 0.0 2.4 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit Zot PF05707.12 RKO89671.1 - 0.16 11.6 0.0 24 4.5 0.0 3.5 3 1 0 4 4 4 0 Zonular occludens toxin (Zot) AAA_30 PF13604.6 RKO89671.1 - 0.24 11.1 0.3 26 4.4 0.0 2.6 3 0 0 3 3 2 0 AAA domain C1_1 PF00130.22 RKO89672.1 - 1.3e-11 44.2 8.5 1.6e-11 43.9 8.5 1.2 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) C1_2 PF03107.16 RKO89672.1 - 0.002 18.4 5.5 0.0033 17.7 5.5 1.4 1 0 0 1 1 1 1 C1 domain FYVE_2 PF02318.16 RKO89672.1 - 0.039 14.2 4.3 0.067 13.4 4.3 1.4 1 1 0 1 1 1 0 FYVE-type zinc finger PHD_4 PF16866.5 RKO89672.1 - 0.11 12.6 8.0 0.53 10.4 8.1 1.9 1 1 0 1 1 1 0 PHD-finger PHD PF00628.29 RKO89672.1 - 0.13 12.2 8.1 0.2 11.6 8.1 1.4 1 0 0 1 1 1 0 PHD-finger Zf_RING PF16744.5 RKO89672.1 - 1.2 9.3 8.0 2.1 8.5 8.0 1.6 1 1 0 1 1 1 0 KIAA1045 RING finger Lipase_3 PF01764.25 RKO89674.1 - 1.8e-44 151.0 0.1 4.2e-26 91.5 0.0 2.2 2 0 0 2 2 2 2 Lipase (class 3) Hydrolase_4 PF12146.8 RKO89674.1 - 4.7e-05 22.8 0.0 0.013 14.8 0.0 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 DUF676 PF05057.14 RKO89674.1 - 0.00014 21.5 0.1 0.27 10.7 0.0 2.2 2 0 0 2 2 2 2 Putative serine esterase (DUF676) DUF2974 PF11187.8 RKO89674.1 - 0.00035 20.2 3.6 0.0074 15.9 0.6 2.9 2 1 0 2 2 2 1 Protein of unknown function (DUF2974) Abhydrolase_8 PF06259.12 RKO89674.1 - 0.021 14.4 2.2 4.2 7.0 0.2 3.2 3 1 0 3 3 3 0 Alpha/beta hydrolase Abhydrolase_5 PF12695.7 RKO89674.1 - 0.11 12.3 0.2 3.5 7.4 0.0 2.3 2 0 0 2 2 2 0 Alpha/beta hydrolase family Glyco_trans_2_3 PF13632.6 RKO89675.1 - 1.8e-24 86.8 4.7 1.8e-24 86.8 4.7 2.0 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 RKO89675.1 - 9.2e-16 58.4 0.4 1.2e-15 58.0 0.4 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 RKO89675.1 - 0.1 13.1 1.0 0.3 11.6 1.0 1.7 1 1 0 1 1 1 0 Glycosyl transferase family 2 Troponin PF00992.20 RKO89678.1 - 0.24 11.7 1.1 0.45 10.8 1.1 1.4 1 0 0 1 1 1 0 Troponin D5_N PF08706.11 RKO89679.1 - 1.1e-07 32.3 0.0 2.4e-07 31.1 0.0 1.6 1 0 0 1 1 1 1 D5 N terminal like DNA_repr_REX1B PF14966.6 RKO89680.1 - 0.023 15.4 2.4 0.47 11.2 0.2 2.3 2 0 0 2 2 2 0 DNA repair REX1-B DUF4259 PF14078.6 RKO89680.1 - 0.064 14.0 0.8 0.14 12.9 0.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4259) DUF16 PF01519.16 RKO89680.1 - 2.2 8.8 5.7 2.5 8.6 0.5 2.6 2 1 0 2 2 2 0 Protein of unknown function DUF16 Cytochrom_B562 PF07361.11 RKO89680.1 - 3.6 8.3 9.9 0.22 12.2 1.7 2.6 3 1 0 3 3 3 0 Cytochrome b562 CTP_synth_N PF06418.14 RKO89681.1 - 5.6e-126 419.3 0.0 7.9e-126 418.8 0.0 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 RKO89681.1 - 3.8e-58 196.4 0.0 5.6e-58 195.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 RKO89681.1 - 0.00085 19.1 0.1 0.0027 17.5 0.1 1.8 1 1 0 1 1 1 1 Peptidase C26 CbiA PF01656.23 RKO89681.1 - 0.084 12.9 0.0 0.11 12.6 0.0 1.5 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain SMC_N PF02463.19 RKO89682.1 - 3.1e-07 30.0 0.5 3.1e-07 30.0 0.5 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Rad50_zn_hook PF04423.14 RKO89682.1 - 6.4e-07 29.1 0.1 6.4e-07 29.1 0.1 4.4 3 0 0 3 3 3 1 Rad50 zinc hook motif SbcCD_C PF13558.6 RKO89682.1 - 4.7e-05 23.5 0.0 0.00016 21.8 0.0 2.0 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_21 PF13304.6 RKO89682.1 - 0.00037 20.4 0.4 0.0018 18.1 0.1 2.3 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF4200 PF13863.6 RKO89682.1 - 0.0026 18.1 15.2 0.0026 18.1 15.2 11.2 7 4 4 11 11 11 2 Domain of unknown function (DUF4200) YflT PF11181.8 RKO89682.1 - 0.0027 18.2 1.9 0.0027 18.2 1.9 5.5 5 2 0 5 5 5 1 Heat induced stress protein YflT Peptidase_M9_N PF08453.10 RKO89682.1 - 0.023 14.4 0.0 8.4 6.1 0.0 2.8 2 0 0 2 2 2 0 Peptidase family M9 N-terminal DASH_Hsk3 PF08227.11 RKO89682.1 - 1.3 9.4 15.4 8.5 6.8 3.5 5.6 5 0 0 5 5 5 0 DASH complex subunit Hsk3 like DASH_Duo1 PF08651.10 RKO89682.1 - 2 8.3 11.9 7.9 6.3 0.0 5.9 5 0 0 5 5 5 0 DASH complex subunit Duo1 DUF1664 PF07889.12 RKO89682.1 - 3.6 7.6 59.7 0.2 11.7 0.6 9.2 3 3 5 9 9 9 0 Protein of unknown function (DUF1664) ATP-synt_A PF00119.20 RKO89686.1 - 3e-09 37.2 0.3 3.7e-09 36.8 0.3 1.1 1 0 0 1 1 1 1 ATP synthase A chain DUF913 PF06025.12 RKO89688.1 - 1.2e-07 31.0 0.0 2.1e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Domain of Unknown Function (DUF913) Abhydrolase_1 PF00561.20 RKO89689.1 - 1.8e-22 80.2 0.1 1e-19 71.2 0.1 2.4 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 RKO89689.1 - 6.6e-16 58.3 0.0 1.4e-15 57.2 0.0 1.5 1 0 0 1 1 1 1 TAP-like protein Nucleo_P87 PF07267.11 RKO89690.1 - 6.3 5.5 5.7 9.6 4.9 5.7 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 Aldo_ket_red PF00248.21 RKO89691.1 - 6e-15 55.2 0.0 3.9e-14 52.5 0.0 1.9 2 0 0 2 2 2 1 Aldo/keto reductase family DALR_2 PF09190.11 RKO89692.1 - 0.18 12.3 0.7 1.1 9.8 0.0 2.5 2 0 0 2 2 2 0 DALR domain DnaJ_C PF01556.18 RKO89693.1 - 4e-41 140.5 0.0 5.3e-41 140.2 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 RKO89693.1 - 5.6e-27 93.7 4.6 9e-27 93.0 4.6 1.3 1 0 0 1 1 1 1 DnaJ domain RPT PF13446.6 RKO89693.1 - 0.001 19.0 0.1 0.0035 17.2 0.1 1.9 2 1 0 2 2 2 1 A repeated domain in UCH-protein adh_short PF00106.25 RKO89694.1 - 5.6e-35 120.6 0.0 6.2e-33 113.9 0.0 2.2 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO89694.1 - 9.8e-25 87.5 0.0 7.4e-23 81.3 0.0 2.1 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 RKO89694.1 - 0.00069 19.6 0.0 0.001 19.0 0.0 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 RKO89694.1 - 0.006 16.1 0.0 0.012 15.1 0.0 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family THF_DHG_CYH_C PF02882.19 RKO89694.1 - 0.019 14.3 0.0 0.031 13.6 0.0 1.2 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_10 PF13460.6 RKO89694.1 - 0.047 13.6 0.0 0.091 12.6 0.0 1.4 1 1 0 1 1 1 0 NAD(P)H-binding adh_short PF00106.25 RKO89695.1 - 1.6e-31 109.3 0.0 1.3e-29 103.1 0.0 2.3 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO89695.1 - 1.1e-19 71.0 0.0 7.7e-18 64.9 0.0 2.1 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 RKO89695.1 - 0.0042 17.0 0.0 0.0061 16.5 0.0 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 RKO89695.1 - 0.017 14.6 0.0 0.045 13.2 0.0 1.6 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family THF_DHG_CYH_C PF02882.19 RKO89695.1 - 0.021 14.1 0.0 0.036 13.4 0.0 1.3 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_10 PF13460.6 RKO89695.1 - 0.12 12.2 0.0 0.22 11.4 0.0 1.4 1 1 0 1 1 1 0 NAD(P)H-binding SWIM PF04434.17 RKO89698.1 - 0.012 15.3 1.5 0.012 15.3 1.5 2.2 2 0 0 2 2 2 0 SWIM zinc finger PI3K_1B_p101 PF10486.9 RKO89703.1 - 0.0083 14.0 1.8 0.011 13.5 1.8 1.1 1 0 0 1 1 1 1 Phosphoinositide 3-kinase gamma adapter protein p101 subunit RNA_pol_3_Rpc31 PF11705.8 RKO89703.1 - 0.67 10.2 7.9 0.8 9.9 0.7 2.7 3 0 0 3 3 3 0 DNA-directed RNA polymerase III subunit Rpc31 DUF1699 PF08004.11 RKO89704.1 - 0.037 13.7 0.0 0.78 9.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1699) Peptidase_S9_N PF02897.15 RKO89705.1 - 1.6e-40 139.2 0.0 1.5e-32 112.9 0.0 2.7 2 1 0 2 2 2 2 Prolyl oligopeptidase, N-terminal beta-propeller domain Peptidase_S9 PF00326.21 RKO89705.1 - 2.7e-33 115.2 0.1 2.7e-32 112.0 0.1 2.2 1 1 0 1 1 1 1 Prolyl oligopeptidase family PQQ PF01011.21 RKO89705.1 - 0.14 12.2 1.1 33 4.6 0.0 3.3 3 0 0 3 3 3 0 PQQ enzyme repeat PMC2NT PF08066.12 RKO89706.1 - 6.1e-19 68.5 0.2 1.3e-18 67.4 0.2 1.6 1 0 0 1 1 1 1 PMC2NT (NUC016) domain Yip1 PF04893.17 RKO89707.1 - 8.6e-05 22.3 0.1 9.5e-05 22.2 0.1 1.1 1 0 0 1 1 1 1 Yip1 domain UPRTase PF14681.6 RKO89708.1 - 4.5e-78 261.4 0.0 5.3e-78 261.2 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 RKO89708.1 - 0.00079 19.0 0.0 0.0011 18.5 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Proteasome PF00227.26 RKO89709.1 - 1.7e-46 158.1 0.6 2.2e-46 157.8 0.6 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 RKO89709.1 - 1.3e-13 50.3 0.2 2.4e-13 49.5 0.2 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature DUF1754 PF08555.10 RKO89711.1 - 2.9 8.8 17.2 0.47 11.3 2.7 3.2 3 0 0 3 3 3 0 Eukaryotic family of unknown function (DUF1754) DUF1387 PF07139.11 RKO89711.1 - 3.6 7.2 13.1 9.2 5.9 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1387) Abhydrolase_1 PF00561.20 RKO89715.1 - 1.2e-21 77.5 0.0 1.6e-19 70.6 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 RKO89715.1 - 5.4e-16 58.6 0.0 1e-15 57.7 0.0 1.4 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO89715.1 - 1.8e-14 54.9 4.5 2.3e-14 54.6 4.5 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Esterase PF00756.20 RKO89715.1 - 0.0011 18.7 0.0 0.0038 16.9 0.0 1.8 1 1 0 1 1 1 1 Putative esterase Ndr PF03096.14 RKO89715.1 - 0.0086 14.8 0.0 0.011 14.4 0.0 1.2 1 0 0 1 1 1 1 Ndr family PGAP1 PF07819.13 RKO89715.1 - 0.016 14.9 0.0 0.025 14.3 0.0 1.2 1 0 0 1 1 1 0 PGAP1-like protein Abhydrolase_3 PF07859.13 RKO89715.1 - 0.068 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold Lipase_3 PF01764.25 RKO89715.1 - 0.079 12.8 0.1 0.18 11.7 0.0 1.6 2 0 0 2 2 2 0 Lipase (class 3) CK2S PF15011.6 RKO89716.1 - 4e-07 30.1 1.0 8.5e-07 29.0 0.1 1.7 2 0 0 2 2 2 1 Casein Kinase 2 substrate Thioredoxin PF00085.20 RKO89717.1 - 0.00052 20.0 0.8 0.033 14.2 0.3 2.1 1 1 1 2 2 2 2 Thioredoxin Thioredoxin_8 PF13905.6 RKO89717.1 - 0.07 13.5 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin-like AAA_9 PF12781.7 RKO89719.1 - 1.9e-94 314.9 0.9 1.9e-94 314.9 0.9 2.7 3 0 0 3 3 3 1 ATP-binding dynein motor region Dynein_C PF18199.1 RKO89719.1 - 5.5e-84 282.0 0.0 6.6e-83 278.4 0.0 2.7 2 1 0 2 2 2 1 Dynein heavy chain C-terminal domain AAA_8 PF12780.7 RKO89719.1 - 1.7e-77 260.2 0.9 5.8e-77 258.5 0.0 2.3 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 AAA_lid_11 PF18198.1 RKO89719.1 - 1.5e-56 190.8 0.0 4.7e-56 189.1 0.0 2.0 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain MT PF12777.7 RKO89719.1 - 1.6e-47 162.2 15.4 1.6e-47 162.2 15.4 1.7 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor Dynein_heavy PF03028.15 RKO89719.1 - 1.2e-42 144.7 0.0 4.7e-40 136.4 0.0 3.0 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Spc7 PF08317.11 RKO89719.1 - 1.3e-05 24.3 5.3 1.3e-05 24.3 5.3 3.2 3 1 0 3 3 3 2 Spc7 kinetochore protein Flagellin_C PF00700.21 RKO89719.1 - 0.075 13.4 3.9 4.3 7.8 0.0 4.0 3 1 0 3 3 3 0 Bacterial flagellin C-terminal helical region Z1 PF10593.9 RKO89719.1 - 0.11 12.0 6.6 1.1 8.8 0.6 3.4 3 0 0 3 3 3 0 Z1 domain DUF4407 PF14362.6 RKO89719.1 - 0.34 10.2 15.8 0.63 9.3 3.9 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4407) CCDC117 PF15810.5 RKO89719.1 - 2.5 8.4 8.5 0.22 11.8 3.4 1.8 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 117 HBM PF16591.5 RKO89719.1 - 2.6 7.4 17.2 0.057 12.8 6.1 2.8 2 1 0 2 2 2 0 Helical bimodular sensor domain Exonuc_VII_S PF02609.16 RKO89719.1 - 4 7.6 7.6 1.1e+02 3.0 0.0 3.3 3 0 0 3 3 3 0 Exonuclease VII small subunit FliD_N PF02465.18 RKO89719.1 - 6.8 7.5 6.7 3.5 8.4 2.8 2.6 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus Asp-B-Hydro_N PF05279.11 RKO89721.1 - 0.16 12.0 9.8 0.21 11.6 9.8 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region TPR_1 PF00515.28 RKO89722.1 - 3.6e-09 36.1 0.0 6.5e-06 25.7 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 RKO89722.1 - 1.5e-06 28.2 0.3 3.1e-06 27.2 0.3 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 RKO89722.1 - 9.6e-06 25.3 0.0 0.00062 19.7 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 RKO89722.1 - 1.6e-05 24.7 0.0 0.033 14.4 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 RKO89722.1 - 4e-05 24.1 0.1 0.046 14.5 0.1 2.6 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO89722.1 - 5.4e-05 23.8 0.0 0.00012 22.6 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 RKO89722.1 - 9e-05 22.1 0.1 0.0011 18.7 0.1 2.5 2 1 1 3 3 3 1 TPR repeat TonB_N PF16031.5 RKO89722.1 - 0.045 14.3 9.5 0.077 13.5 9.5 1.4 1 0 0 1 1 1 0 TonB polyproline region TPR_19 PF14559.6 RKO89722.1 - 0.051 14.1 0.0 0.2 12.2 0.0 1.9 1 1 1 2 2 2 0 Tetratricopeptide repeat DUF755 PF05501.11 RKO89722.1 - 0.22 11.8 11.0 0.34 11.2 11.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Nucleo_P87 PF07267.11 RKO89722.1 - 0.22 10.3 1.9 0.21 10.4 1.9 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 NARP1 PF12569.8 RKO89722.1 - 0.26 10.2 5.9 0.73 8.7 0.0 2.1 2 0 0 2 2 2 0 NMDA receptor-regulated protein 1 Aa_trans PF01490.18 RKO89724.1 - 1.8e-80 270.7 18.6 2e-80 270.5 18.6 1.0 1 0 0 1 1 1 1 Transmembrane amino acid transporter protein Trp_Tyr_perm PF03222.13 RKO89724.1 - 2.1e-10 40.2 5.9 4.6e-10 39.1 5.8 1.6 1 1 0 1 1 1 1 Tryptophan/tyrosine permease family TMEM234 PF10639.9 RKO89725.1 - 1.8e-06 27.9 0.2 2.5e-06 27.5 0.2 1.2 1 0 0 1 1 1 1 Putative transmembrane family 234 EamA PF00892.20 RKO89725.1 - 0.00016 21.8 10.7 0.00059 20.0 10.7 1.7 1 1 0 1 1 1 1 EamA-like transporter family UAA PF08449.11 RKO89725.1 - 0.0041 16.4 0.4 0.0049 16.1 0.4 1.1 1 0 0 1 1 1 1 UAA transporter family MgtC PF02308.16 RKO89725.1 - 0.017 15.5 0.8 0.14 12.5 0.8 2.2 1 1 0 1 1 1 0 MgtC family Form-deh_trans PF09163.11 RKO89726.1 - 0.078 12.8 0.1 0.19 11.6 0.0 1.7 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Paf1 PF03985.13 RKO89727.1 - 2.8e-06 26.6 0.0 2.8e-06 26.6 0.0 1.0 1 0 0 1 1 1 1 Paf1 Kinesin PF00225.23 RKO89728.1 - 1e-56 192.3 0.8 1e-56 192.3 0.8 1.5 2 0 0 2 2 2 1 Kinesin motor domain Kinesin_assoc PF16183.5 RKO89728.1 - 1.5e-14 54.5 11.4 1.3e-09 38.5 3.5 2.6 2 1 1 3 3 3 2 Kinesin-associated Treacle PF03546.14 RKO89728.1 - 0.0052 15.7 0.9 0.0076 15.1 0.9 1.2 1 0 0 1 1 1 1 Treacher Collins syndrome protein Treacle Taxilin PF09728.9 RKO89728.1 - 0.016 14.4 9.0 0.026 13.7 9.0 1.3 1 0 0 1 1 1 0 Myosin-like coiled-coil protein cwf18 PF08315.12 RKO89728.1 - 0.31 11.7 11.5 0.2 12.3 8.5 2.0 2 0 0 2 2 2 0 cwf18 pre-mRNA splicing factor Rtf2 PF04641.12 RKO89728.1 - 1.3 8.3 7.0 2.1 7.6 7.0 1.3 1 0 0 1 1 1 0 Rtf2 RING-finger Occludin_ELL PF07303.13 RKO89728.1 - 1.4 9.7 4.7 3.6 8.4 1.4 2.4 1 1 1 2 2 2 0 Occludin homology domain WGR PF05406.15 RKO89729.1 - 8.9e-17 60.9 0.0 2.1e-16 59.7 0.0 1.7 1 0 0 1 1 1 1 WGR domain zf-PARP PF00645.18 RKO89729.1 - 7.5e-10 39.5 0.0 1.9e-08 35.1 0.0 2.7 2 0 0 2 2 2 1 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region PADR1 PF08063.12 RKO89729.1 - 4.7e-09 35.9 0.1 1e-08 34.8 0.1 1.6 1 0 0 1 1 1 1 PADR1 (NUC008) domain BRCT PF00533.26 RKO89729.1 - 4.9e-09 36.4 0.0 2e-08 34.5 0.0 2.0 2 0 0 2 2 2 1 BRCA1 C Terminus (BRCT) domain BRCT_2 PF16589.5 RKO89729.1 - 3.5e-05 24.1 0.0 7.9e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain SPT6_acidic PF14632.6 RKO89729.1 - 0.0059 17.2 0.6 0.017 15.7 0.6 1.7 1 0 0 1 1 1 1 Acidic N-terminal SPT6 PTCB-BRCT PF12738.7 RKO89729.1 - 0.043 13.8 0.0 0.15 12.1 0.0 1.8 2 0 0 2 2 2 0 twin BRCT domain Ribosomal_L13e PF01294.18 RKO89730.1 - 1.1e-75 253.5 3.6 1.4e-75 253.1 3.6 1.2 1 0 0 1 1 1 1 Ribosomal protein L13e Nuf2 PF03800.14 RKO89731.1 - 7.6e-41 139.5 0.0 9.2e-41 139.2 0.0 1.0 1 0 0 1 1 1 1 Nuf2 family RRM_1 PF00076.22 RKO89732.1 - 1.8e-13 50.1 0.0 3.1e-10 39.7 0.0 2.5 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 RKO89732.1 - 0.02 14.7 0.0 0.061 13.2 0.0 1.8 2 0 0 2 2 2 0 Occluded RNA-recognition motif CDC45 PF02724.14 RKO89733.1 - 0.16 10.2 0.3 0.2 9.9 0.3 1.1 1 0 0 1 1 1 0 CDC45-like protein Glycoprotein PF03409.15 RKO89734.1 - 0.074 11.9 0.0 0.11 11.3 0.0 1.2 1 0 0 1 1 1 0 Transmembrane glycoprotein NAT PF04768.13 RKO89736.1 - 1.4e-41 142.0 0.0 2.2e-41 141.3 0.0 1.3 1 0 0 1 1 1 1 NAT, N-acetyltransferase, of N-acetylglutamate synthase AA_kinase PF00696.28 RKO89736.1 - 8.6e-25 87.7 0.5 9.3e-24 84.3 0.7 2.0 1 1 1 2 2 2 1 Amino acid kinase family Ank_4 PF13637.6 RKO89737.1 - 1.6e-07 31.7 1.3 0.3 11.7 0.3 4.3 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO89737.1 - 6.9e-06 26.6 0.2 0.015 15.9 0.1 2.8 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO89737.1 - 0.00014 22.0 1.8 0.84 10.4 0.0 4.8 5 1 0 6 6 6 1 Ankyrin repeat Ank_5 PF13857.6 RKO89737.1 - 0.00089 19.5 1.8 4.7 7.7 0.0 4.0 4 1 1 5 5 5 2 Ankyrin repeats (many copies) FdhD-NarQ PF02634.15 RKO89737.1 - 0.064 12.9 0.7 0.096 12.3 0.7 1.2 1 0 0 1 1 1 0 FdhD/NarQ family MFS_1 PF07690.16 RKO89738.1 - 3.3e-07 29.5 14.8 4.9e-07 29.0 13.9 1.6 2 0 0 2 2 2 1 Major Facilitator Superfamily Methyltransf_25 PF13649.6 RKO89739.1 - 2.5e-06 28.1 0.0 1.2e-05 26.0 0.0 2.1 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 RKO89739.1 - 0.00012 22.7 0.0 0.00064 20.4 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 RKO89739.1 - 0.00027 20.8 0.0 0.00037 20.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 RKO89739.1 - 0.0015 17.9 0.0 0.003 16.9 0.0 1.4 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.12 RKO89739.1 - 0.0046 17.6 0.0 0.025 15.2 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 RKO89739.1 - 0.032 14.0 0.1 0.27 10.9 0.0 2.0 2 0 0 2 2 2 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) EF-hand_4 PF12763.7 RKO89740.1 - 3.8e-18 65.4 0.0 4.9e-16 58.6 0.0 2.4 2 0 0 2 2 2 1 Cytoskeletal-regulatory complex EF hand EF-hand_1 PF00036.32 RKO89740.1 - 0.00084 18.7 0.0 0.064 12.8 0.0 2.7 3 0 0 3 3 3 1 EF hand EF-hand_6 PF13405.6 RKO89740.1 - 0.05 13.5 0.0 7.2 6.8 0.0 2.5 2 0 0 2 2 2 0 EF-hand domain DUF3450 PF11932.8 RKO89740.1 - 2.4 7.4 7.0 3 7.1 2.7 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) HalX PF08663.10 RKO89742.1 - 0.00071 19.8 9.7 0.0014 18.9 1.4 3.5 3 0 0 3 3 3 1 HalX domain DUF4407 PF14362.6 RKO89742.1 - 0.068 12.5 0.7 0.23 10.8 0.4 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) MPS2 PF17060.5 RKO89742.1 - 0.26 10.5 1.5 2.1 7.5 0.2 2.1 2 0 0 2 2 2 0 Monopolar spindle protein 2 ABC_tran_CTD PF16326.5 RKO89742.1 - 0.52 10.6 6.2 0.57 10.5 1.8 2.6 2 0 0 2 2 2 0 ABC transporter C-terminal domain NPV_P10 PF05531.12 RKO89742.1 - 1.3 9.5 3.0 3.9 8.0 0.3 3.0 3 1 1 4 4 4 0 Nucleopolyhedrovirus P10 protein MCM PF00493.23 RKO89743.1 - 4.9e-103 343.0 0.0 8.1e-103 342.3 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 RKO89743.1 - 1.1e-36 125.5 0.0 2.3e-36 124.4 0.0 1.5 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 RKO89743.1 - 4.4e-29 100.7 1.2 1.2e-28 99.4 1.2 1.8 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_N PF14551.6 RKO89743.1 - 4.6e-18 65.7 1.2 1e-17 64.6 1.2 1.6 1 0 0 1 1 1 1 MCM N-terminal domain Mg_chelatase PF01078.21 RKO89743.1 - 7.6e-07 28.7 0.0 0.00027 20.4 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 RKO89743.1 - 0.00015 21.8 0.0 0.00067 19.7 0.0 2.1 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) GntR PF00392.21 RKO89743.1 - 0.00052 19.6 0.3 0.058 13.0 0.2 2.5 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family AAA_3 PF07726.11 RKO89743.1 - 0.00056 19.8 0.0 0.0024 17.7 0.0 2.0 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 RKO89743.1 - 0.019 14.7 0.0 1.1 9.0 0.0 2.8 3 0 0 3 3 3 0 Sigma-54 interaction domain CheZ PF04344.13 RKO89743.1 - 0.12 12.3 1.1 0.23 11.3 1.1 1.4 1 0 0 1 1 1 0 Chemotaxis phosphatase, CheZ AAA_lid_7 PF17867.1 RKO89743.1 - 0.22 11.8 1.3 0.3 11.3 0.2 1.8 2 0 0 2 2 2 0 Midasin AAA lid domain DOPA_dioxygen PF08883.11 RKO89744.1 - 1e-27 96.4 0.3 1.2e-27 96.2 0.3 1.0 1 0 0 1 1 1 1 Dopa 4,5-dioxygenase family DUF4032 PF13224.6 RKO89744.1 - 0.1 12.5 0.0 0.29 11.0 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4032) Castor1_N PF18700.1 RKO89744.1 - 0.18 11.7 0.0 0.3 11.0 0.0 1.3 1 0 0 1 1 1 0 Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain Lipase_3 PF01764.25 RKO89745.1 - 5.2e-20 71.8 0.0 7.3e-20 71.3 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO89745.1 - 0.0044 16.6 0.2 0.0095 15.5 0.2 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) HVSL PF09749.9 RKO89747.1 - 7.2e-48 163.1 0.0 9.1e-48 162.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised conserved protein 2_5_RNA_ligase2 PF13563.6 RKO89747.1 - 0.0081 16.1 0.0 0.017 15.1 0.0 1.5 1 1 0 1 1 1 1 2'-5' RNA ligase superfamily DUF4360 PF14273.6 RKO89748.1 - 1.1e-44 152.4 1.2 1.2e-44 152.3 1.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4360) Myb_DNA-binding PF00249.31 RKO89749.1 - 0.00069 19.8 0.0 0.0011 19.1 0.0 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO89749.1 - 0.0025 18.0 0.0 0.0049 17.1 0.0 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Glyco_hydro_43 PF04616.14 RKO89750.1 - 5.2e-27 94.9 0.2 6.6e-27 94.6 0.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 43 Dopey_N PF04118.14 RKO89752.1 - 0.005 16.0 0.0 0.0055 15.9 0.0 1.1 1 0 0 1 1 1 1 Dopey, N-terminal Apolipoprotein PF01442.18 RKO89753.1 - 0.032 14.1 3.0 0.047 13.6 3.0 1.1 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain LXG PF04740.12 RKO89753.1 - 0.08 12.6 3.0 0.12 12.1 3.0 1.1 1 0 0 1 1 1 0 LXG domain of WXG superfamily SUIM_assoc PF16619.5 RKO89753.1 - 0.099 12.7 4.6 0.18 11.9 4.6 1.4 1 0 0 1 1 1 0 Unstructured region C-term to UIM in Ataxin3 FtsX_ECD PF18075.1 RKO89753.1 - 0.25 12.0 1.4 0.41 11.3 1.4 1.2 1 0 0 1 1 1 0 FtsX extracellular domain MIF4G_like_2 PF09090.11 RKO89753.1 - 0.59 9.5 3.4 0.82 9.1 3.4 1.1 1 0 0 1 1 1 0 MIF4G like RhoGEF PF00621.20 RKO89756.1 - 0.018 15.3 0.0 0.026 14.8 0.0 1.1 1 0 0 1 1 1 0 RhoGEF domain Ribosomal_L1 PF00687.21 RKO89757.1 - 1.2e-44 152.6 0.1 1.4e-44 152.3 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family DNA_pol_phi PF04931.13 RKO89758.1 - 7.7e-208 692.3 16.6 9.6e-208 692.0 16.6 1.1 1 0 0 1 1 1 1 DNA polymerase phi Nop14 PF04147.12 RKO89758.1 - 0.0076 14.5 18.5 0.013 13.7 18.5 1.3 1 0 0 1 1 1 1 Nop14-like family BUD22 PF09073.10 RKO89758.1 - 0.014 14.8 22.0 0.028 13.8 22.0 1.4 1 0 0 1 1 1 0 BUD22 ORC5_C PF14630.6 RKO89758.1 - 0.093 12.2 0.0 1.1 8.8 0.0 2.5 2 1 0 2 2 2 0 Origin recognition complex (ORC) subunit 5 C-terminus SDA1 PF05285.12 RKO89758.1 - 3.4 7.0 23.8 6.3 6.1 23.8 1.3 1 0 0 1 1 1 0 SDA1 TPR_12 PF13424.6 RKO89759.1 - 6.8e-06 26.3 0.2 0.031 14.6 0.2 2.7 2 0 0 2 2 2 2 Tetratricopeptide repeat zf-MYND PF01753.18 RKO89759.1 - 0.00059 19.9 10.1 0.00059 19.9 10.1 2.1 2 0 0 2 2 2 1 MYND finger TPR_10 PF13374.6 RKO89759.1 - 0.00084 19.1 0.5 0.39 10.7 0.7 2.8 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 RKO89759.1 - 0.016 15.2 0.2 3.9 7.7 0.1 2.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO89759.1 - 0.5 11.3 4.4 2.7 9.0 0.5 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 RKO89760.1 - 0.0056 16.7 0.0 0.084 13.0 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 RKO89760.1 - 0.012 15.6 0.1 0.031 14.3 0.1 1.7 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO89760.1 - 0.015 16.1 0.1 0.034 15.0 0.1 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_12 PF13424.6 RKO89760.1 - 0.021 15.1 0.1 0.034 14.4 0.1 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_10 PF13374.6 RKO89760.1 - 0.045 13.6 0.2 0.15 12.0 0.2 2.0 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO89760.1 - 0.14 12.9 1.7 0.15 12.8 0.1 1.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_11 PF13414.6 RKO89760.1 - 0.14 11.8 0.1 1.3 8.8 0.0 2.1 1 1 1 2 2 2 0 TPR repeat TPR_1 PF00515.28 RKO89760.1 - 0.2 11.5 0.0 4.7 7.2 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO89761.1 - 0.019 15.6 0.7 0.074 13.7 0.3 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_20 PF14561.6 RKO89761.1 - 0.092 13.1 0.0 0.17 12.2 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF832 PF05734.11 RKO89761.1 - 0.23 10.9 0.1 0.36 10.3 0.1 1.2 1 0 0 1 1 1 0 Herpesvirus protein of unknown function (DUF832) Zn_clus PF00172.18 RKO89762.1 - 9.3e-08 32.1 7.8 1.5e-07 31.4 7.8 1.3 1 0 0 1 1 1 1 Fungal Zn(2)-Cys(6) binuclear cluster domain Macoilin PF09726.9 RKO89762.1 - 0.019 13.5 0.1 0.027 13.1 0.1 1.3 1 0 0 1 1 1 0 Macoilin family His_biosynth PF00977.21 RKO89764.1 - 4.5e-10 39.4 0.0 5.2e-10 39.2 0.0 1.1 1 0 0 1 1 1 1 Histidine biosynthesis protein His_biosynth PF00977.21 RKO89765.1 - 4.3e-27 95.1 0.0 5.6e-27 94.7 0.0 1.1 1 0 0 1 1 1 1 Histidine biosynthesis protein KR PF08659.10 RKO89765.1 - 0.12 12.2 0.0 0.22 11.4 0.0 1.4 1 0 0 1 1 1 0 KR domain Wbp11 PF09429.10 RKO89766.1 - 0.00097 19.5 8.2 0.00097 19.5 8.2 1.7 2 0 0 2 2 2 1 WW domain binding protein 11 AF-4 PF05110.13 RKO89766.1 - 0.0025 16.0 13.0 0.0031 15.7 13.0 1.1 1 0 0 1 1 1 1 AF-4 proto-oncoprotein Histone_HNS PF00816.21 RKO89766.1 - 0.065 14.1 1.5 0.15 12.9 1.5 1.6 1 0 0 1 1 1 0 H-NS histone family CheY-binding PF09078.11 RKO89766.1 - 0.15 12.2 0.3 0.25 11.5 0.3 1.4 1 0 0 1 1 1 0 CheY binding CENP-B_dimeris PF09026.10 RKO89766.1 - 5.1 7.5 7.5 11 6.5 7.5 1.5 1 0 0 1 1 1 0 Centromere protein B dimerisation domain zf-MYND PF01753.18 RKO89767.1 - 2e-09 37.4 26.0 1e-08 35.1 14.9 3.0 3 0 0 3 3 3 2 MYND finger TPR_7 PF13176.6 RKO89767.1 - 0.019 15.0 2.1 1 9.6 0.0 3.3 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF3659 PF12396.8 RKO89767.1 - 0.095 12.6 0.1 0.61 10.0 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3659) DUF2793 PF10983.8 RKO89767.1 - 0.16 11.8 0.0 32 4.5 0.0 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF2793) TPR_2 PF07719.17 RKO89767.1 - 1.8 8.9 6.2 2.5 8.4 0.0 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat SF1-HH PF16275.5 RKO89769.1 - 2.1e-37 127.9 0.4 4.1e-37 127.0 0.2 1.6 2 0 0 2 2 2 1 Splicing factor 1 helix-hairpin domain KH_1 PF00013.29 RKO89769.1 - 6.9e-09 35.4 0.3 1.3e-08 34.5 0.3 1.5 1 0 0 1 1 1 1 KH domain zf-CCHC PF00098.23 RKO89769.1 - 3.1e-05 23.9 6.6 0.00096 19.1 2.9 2.3 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_3 PF13917.6 RKO89769.1 - 0.0038 17.2 3.7 0.0058 16.6 0.5 2.3 1 1 1 2 2 2 1 Zinc knuckle Prim_Zn_Ribbon PF08273.12 RKO89769.1 - 0.0039 17.4 3.8 0.0076 16.5 3.8 1.4 1 0 0 1 1 1 1 Zinc-binding domain of primase-helicase DnaJ_CXXCXGXG PF00684.19 RKO89769.1 - 0.0047 17.2 2.7 0.0091 16.3 2.7 1.5 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 RKO89769.1 - 0.036 14.0 1.6 0.078 13.0 1.6 1.5 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein KH_5 PF13184.6 RKO89769.1 - 0.15 12.2 0.3 0.38 10.9 0.0 1.8 2 0 0 2 2 2 0 NusA-like KH domain zf-CCHC_4 PF14392.6 RKO89769.1 - 3.6 7.4 7.5 2.7 7.8 0.6 2.6 3 0 0 3 3 3 0 Zinc knuckle zf-CCHC_6 PF15288.6 RKO89769.1 - 9.3 6.2 10.4 4.8 7.1 2.4 2.6 1 1 1 2 2 2 0 Zinc knuckle Pkinase PF00069.25 RKO89770.1 - 1.8e-08 34.1 0.3 2.6e-08 33.5 0.3 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO89770.1 - 0.00019 20.8 0.2 0.00029 20.2 0.2 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Arteri_env PF01606.16 RKO89770.1 - 0.072 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Arterivirus envelope protein Pet127 PF08634.10 RKO89771.1 - 1.6e-63 214.7 0.1 2.1e-63 214.4 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial protein Pet127 XPB_DRD PF18458.1 RKO89771.1 - 0.056 13.3 0.0 0.19 11.6 0.0 1.9 2 1 0 2 2 2 0 Xeroderma pigmentosum group B helicase damage recognition domain Tubulin PF00091.25 RKO89772.1 - 1.9e-69 233.8 0.0 3.8e-69 232.9 0.0 1.5 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 RKO89772.1 - 1.8e-43 147.7 0.1 2.8e-43 147.1 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 RKO89772.1 - 1.3e-05 25.5 0.0 3.3e-05 24.2 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 RKO89772.1 - 0.0011 18.7 0.0 0.0022 17.7 0.0 1.5 1 0 0 1 1 1 1 Tubulin domain Tubulin_2 PF13809.6 RKO89772.1 - 0.018 14.3 0.0 0.055 12.6 0.0 1.7 2 0 0 2 2 2 0 Tubulin like SabA_adhesion PF18304.1 RKO89773.1 - 0.14 11.4 0.0 0.19 10.9 0.0 1.2 1 0 0 1 1 1 0 SabA N-terminal extracellular adhesion domain LRR_6 PF13516.6 RKO89774.1 - 0.012 15.7 0.6 1.3 9.3 0.1 2.7 2 0 0 2 2 2 0 Leucine Rich repeat EGF_2 PF07974.13 RKO89774.1 - 0.03 14.7 14.4 0.03 14.7 14.4 2.7 3 0 0 3 3 3 0 EGF-like domain LRR_8 PF13855.6 RKO89774.1 - 0.052 13.3 0.4 0.18 11.6 0.2 1.9 2 0 0 2 2 2 0 Leucine rich repeat EGF_Tenascin PF18720.1 RKO89774.1 - 0.22 11.6 10.8 0.58 10.3 10.8 1.8 1 0 0 1 1 1 0 Tenascin EGF domain I-EGF_1 PF18372.1 RKO89774.1 - 0.31 11.2 6.9 0.74 10.0 6.9 1.6 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 Toxin_2 PF00451.19 RKO89774.1 - 1.4 9.3 7.5 6 7.3 7.5 2.1 1 0 0 1 1 1 0 Scorpion short toxin, BmKK2 LRR_8 PF13855.6 RKO89775.1 - 0.072 12.9 0.1 0.13 12.1 0.1 1.4 1 0 0 1 1 1 0 Leucine rich repeat Lipase_3 PF01764.25 RKO89776.1 - 5.8e-29 100.8 0.0 7.5e-29 100.4 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO89776.1 - 6.6e-06 25.8 0.7 5.3e-05 22.9 0.7 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 RKO89776.1 - 0.0028 16.9 0.1 0.0057 16.0 0.0 1.5 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO89776.1 - 0.028 15.0 2.1 0.035 14.7 1.5 1.5 1 1 0 1 1 1 0 Alpha/beta hydrolase family Esterase PF00756.20 RKO89776.1 - 0.082 12.5 0.1 0.13 11.9 0.1 1.2 1 0 0 1 1 1 0 Putative esterase Chlorophyllase PF07224.11 RKO89776.1 - 0.09 11.8 0.0 0.13 11.2 0.0 1.3 1 0 0 1 1 1 0 Chlorophyllase DUF676 PF05057.14 RKO89776.1 - 0.097 12.2 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Bys1 PF04681.12 RKO89777.1 - 0.82 9.6 8.4 5.4 6.9 0.8 2.9 1 1 2 3 3 3 0 Blastomyces yeast-phase-specific protein Exonuc_VIII PF06630.11 RKO89778.1 - 0.0096 15.8 0.0 0.011 15.6 0.0 1.0 1 0 0 1 1 1 1 Enterobacterial exodeoxyribonuclease VIII Bys1 PF04681.12 RKO89778.1 - 0.23 11.4 2.3 2.1 8.3 0.1 2.3 1 1 2 3 3 3 0 Blastomyces yeast-phase-specific protein SAM_1 PF00536.30 RKO89780.1 - 3.8e-05 24.1 0.0 5.9e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_2 PF07647.17 RKO89780.1 - 0.00023 21.2 0.0 0.00038 20.5 0.0 1.3 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) LRR_6 PF13516.6 RKO89781.1 - 0.048 13.7 0.4 0.12 12.5 0.4 1.7 1 0 0 1 1 1 0 Leucine Rich repeat LRR_8 PF13855.6 RKO89781.1 - 0.19 11.5 0.2 0.42 10.4 0.2 1.6 1 0 0 1 1 1 0 Leucine rich repeat peroxidase PF00141.23 RKO89782.1 - 3.5e-43 147.9 0.0 6.6e-43 147.0 0.0 1.3 1 1 0 1 1 1 1 Peroxidase LRR_8 PF13855.6 RKO89784.1 - 8.9e-05 22.2 0.2 0.043 13.6 0.1 2.3 2 0 0 2 2 2 2 Leucine rich repeat LRR_4 PF12799.7 RKO89784.1 - 0.053 14.0 0.4 0.57 10.7 0.3 2.4 2 0 0 2 2 2 0 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 RKO89784.1 - 0.5 11.1 4.3 4.5 8.2 0.0 3.9 4 0 0 4 4 4 0 Leucine Rich Repeat F-box-like PF12937.7 RKO89785.1 - 5.3e-08 32.6 2.6 5.3e-08 32.6 2.6 2.8 3 0 0 3 3 3 1 F-box-like LRR_4 PF12799.7 RKO89785.1 - 1.4e-06 28.5 12.3 0.55 10.7 0.2 5.7 5 1 1 6 6 6 4 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 RKO89785.1 - 0.00028 20.7 12.5 1.1 9.5 0.1 6.7 7 0 0 7 7 7 2 Leucine Rich repeat LRR_1 PF00560.33 RKO89785.1 - 0.053 14.1 11.7 58 4.8 0.4 7.0 7 1 0 7 7 7 0 Leucine Rich Repeat Dzip-like_N PF13815.6 RKO89786.1 - 1.3e-32 112.2 0.7 1.3e-32 112.2 0.7 2.8 3 0 0 3 3 3 1 Iguana/Dzip1-like DAZ-interacting protein N-terminal zf-C2H2_jaz PF12171.8 RKO89786.1 - 0.00016 21.9 3.5 0.00018 21.7 2.1 1.9 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 RKO89786.1 - 0.0046 16.9 3.1 0.011 15.7 3.1 1.6 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2 PF00096.26 RKO89786.1 - 0.0082 16.6 5.0 0.016 15.7 5.0 1.5 1 0 0 1 1 1 1 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO89786.1 - 0.013 16.3 4.7 0.013 16.3 4.7 1.9 2 0 0 2 2 2 0 C2H2-type zinc finger ARS2 PF04959.13 RKO89786.1 - 0.086 13.2 0.0 0.21 11.9 0.0 1.6 1 0 0 1 1 1 0 Arsenite-resistance protein 2 zf-Di19 PF05605.12 RKO89786.1 - 0.14 12.4 2.9 0.36 11.1 2.9 1.6 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-met PF12874.7 RKO89786.1 - 0.38 11.2 3.5 0.35 11.3 1.9 1.8 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf_Hakai PF18408.1 RKO89786.1 - 0.49 10.2 2.2 1 9.1 2.2 1.5 1 0 0 1 1 1 0 C2H2 Hakai zinc finger domain zf-C2H2_11 PF16622.5 RKO89786.1 - 1.6 8.5 3.5 2.8 7.8 3.5 1.3 1 0 0 1 1 1 0 zinc-finger C2H2-type WD40 PF00400.32 RKO89787.1 - 1.8e-25 88.7 10.2 0.00013 22.7 0.0 9.1 9 0 0 9 9 9 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO89787.1 - 2.3e-06 27.8 0.8 0.00035 20.8 0.0 4.4 4 2 2 6 6 6 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO89787.1 - 0.0024 16.6 2.9 1.8 7.1 0.0 3.8 4 1 1 5 5 5 2 Nucleoporin Nup120/160 PALB2_WD40 PF16756.5 RKO89787.1 - 0.092 11.7 0.0 1.8 7.4 0.0 2.3 2 0 0 2 2 2 0 Partner and localizer of BRCA2 WD40 domain Nucleoporin_N PF08801.11 RKO89787.1 - 0.18 10.5 0.2 2.2 6.9 0.0 2.5 2 1 1 3 3 3 0 Nup133 N terminal like RPN1_RPN2_N PF17781.1 RKO89788.1 - 6e-124 413.4 1.6 1e-123 412.7 1.6 1.4 1 0 0 1 1 1 1 RPN1/RPN2 N-terminal domain RPN1_C PF18051.1 RKO89788.1 - 4.9e-32 109.7 0.1 9.2e-32 108.9 0.1 1.5 1 0 0 1 1 1 1 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal PC_rep PF01851.22 RKO89788.1 - 1.1e-31 107.6 14.0 1.3e-08 34.8 0.3 8.2 8 0 0 8 8 8 5 Proteasome/cyclosome repeat HEAT_2 PF13646.6 RKO89788.1 - 6.3e-10 39.3 1.4 0.00069 20.0 0.1 4.6 4 1 1 5 5 5 3 HEAT repeats DUF2776 PF10951.8 RKO89788.1 - 0.12 11.6 0.0 0.23 10.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2776) RbpA PF13397.6 RKO89788.1 - 0.46 11.1 2.6 1.5 9.5 1.8 2.2 2 0 0 2 2 2 0 RNA polymerase-binding protein Casc1_N PF15927.5 RKO89788.1 - 0.99 9.1 5.9 2.7 7.6 5.9 1.7 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus HAND PF09110.11 RKO89788.1 - 1.3 9.8 8.9 1.7 9.4 7.2 2.1 2 0 0 2 2 2 0 HAND Ribosomal_60s PF00428.19 RKO89788.1 - 3.9 8.1 13.7 11 6.6 13.7 1.8 1 0 0 1 1 1 0 60s Acidic ribosomal protein Utp14 PF04615.13 RKO89789.1 - 1.9e-169 565.8 34.6 1.2e-137 460.6 24.7 3.9 1 1 2 3 3 3 2 Utp14 protein D5_N PF08706.11 RKO89789.1 - 6.5 7.0 9.3 2.8e+02 1.7 9.2 2.9 1 1 0 1 1 1 0 D5 N terminal like IQ PF00612.27 RKO89792.1 - 0.00027 20.4 0.2 0.00094 18.8 0.2 2.0 1 0 0 1 1 1 1 IQ calmodulin-binding motif Nucleoporin_C PF03177.14 RKO89793.1 - 5.3e-58 197.2 0.2 2.9e-57 194.7 0.2 1.8 1 1 0 1 1 1 1 Non-repetitive/WGA-negative nucleoporin C-terminal SIS PF01380.22 RKO89794.1 - 5.8e-33 113.5 0.1 3.5e-17 62.5 0.1 2.5 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 RKO89794.1 - 8.6e-05 22.8 0.0 0.00025 21.3 0.0 1.8 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 RKO89794.1 - 0.011 15.6 0.0 0.057 13.3 0.0 2.2 1 1 0 1 1 1 0 Glutamine amidotransferase domain CUE PF02845.16 RKO89795.1 - 3.9e-10 39.2 0.0 8.8e-10 38.1 0.0 1.6 2 0 0 2 2 2 1 CUE domain FAM150 PF15129.6 RKO89796.1 - 0.13 12.5 0.0 0.28 11.3 0.0 1.5 1 0 0 1 1 1 0 FAM150 family DUF4381 PF14316.6 RKO89798.1 - 6.5 7.0 10.3 3 8.1 1.3 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4381) Ank_5 PF13857.6 RKO89799.1 - 9.6e-22 76.8 1.1 1.4e-12 47.6 0.2 2.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO89799.1 - 5.4e-17 62.1 0.0 2.4e-08 34.4 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO89799.1 - 7.2e-17 61.5 2.2 1e-07 32.3 0.0 3.2 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank PF00023.30 RKO89799.1 - 1.4e-13 50.6 0.0 4.8e-05 23.6 0.0 4.1 4 0 0 4 4 4 4 Ankyrin repeat Ank_3 PF13606.6 RKO89799.1 - 2e-13 49.2 0.0 0.0002 21.5 0.0 3.9 4 0 0 4 4 4 3 Ankyrin repeat Ank PF00023.30 RKO89800.1 - 2.6e-11 43.4 1.0 0.00014 22.2 0.1 2.2 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 RKO89800.1 - 3.9e-11 43.0 0.9 3e-05 24.2 0.1 2.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO89800.1 - 5.9e-11 42.8 0.1 1.6e-10 41.4 0.1 1.6 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO89800.1 - 1.9e-10 41.1 0.2 2.2e-10 40.8 0.2 1.1 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO89800.1 - 2.2e-09 36.8 0.2 0.0028 18.0 0.0 2.1 2 0 0 2 2 2 2 Ankyrin repeat GATase_7 PF13537.6 RKO89800.1 - 0.0014 18.5 0.0 0.47 10.4 0.0 2.0 1 1 1 2 2 2 2 Glutamine amidotransferase domain AsnC_trans_reg PF01037.21 RKO89801.1 - 0.15 12.1 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 Lrp/AsnC ligand binding domain dCMP_cyt_deam_1 PF00383.23 RKO89802.1 - 2.5e-20 72.2 0.2 3.3e-20 71.9 0.2 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 RKO89802.1 - 2.2e-17 63.1 0.0 2.9e-17 62.7 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase APOBEC3 PF18771.1 RKO89802.1 - 0.00057 20.0 0.0 0.00087 19.4 0.0 1.3 1 0 0 1 1 1 1 APOBEC3 SNAD4 PF18750.1 RKO89802.1 - 0.0023 18.0 0.0 0.0035 17.4 0.0 1.3 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC_N PF08210.11 RKO89802.1 - 0.0097 15.8 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 APOBEC-like N-terminal domain NAD1 PF18778.1 RKO89802.1 - 0.013 15.6 0.0 0.018 15.1 0.0 1.2 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 APOBEC2 PF18772.1 RKO89802.1 - 0.017 15.2 0.0 0.025 14.6 0.0 1.2 1 0 0 1 1 1 0 APOBEC2 APOBEC4_like PF18774.1 RKO89802.1 - 0.075 13.0 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 APOBEC4-like -AID/APOBEC-deaminase Bd3614-deam PF14439.6 RKO89802.1 - 0.12 12.4 1.1 0.32 11.1 1.1 1.7 1 1 0 1 1 1 0 Bd3614-like deaminase NAD2 PF18782.1 RKO89802.1 - 0.19 11.8 0.0 0.27 11.3 0.0 1.2 1 0 0 1 1 1 0 Novel AID APOBEC clade 2 Las1 PF04031.13 RKO89803.1 - 6.9e-48 162.6 0.3 2.3e-47 160.9 0.0 2.0 3 0 0 3 3 3 1 Las1-like PIG-U PF06728.13 RKO89804.1 - 2.9e-97 326.1 34.8 3.3e-97 325.9 34.8 1.0 1 0 0 1 1 1 1 GPI transamidase subunit PIG-U 8TM_micro PF17028.5 RKO89804.1 - 3.7e-05 23.6 12.9 8.4e-05 22.4 12.9 1.5 1 0 0 1 1 1 1 8TM Microsporidial transmembrane domain SpoU_methylase PF00588.19 RKO89806.1 - 5e-31 107.8 0.0 1.6e-30 106.2 0.0 1.7 2 0 0 2 2 2 1 SpoU rRNA Methylase family SpoU_sub_bind PF08032.12 RKO89806.1 - 0.0021 18.3 0.0 0.15 12.4 0.0 3.1 2 1 0 2 2 2 1 RNA 2'-O ribose methyltransferase substrate binding Pilus_CpaD PF09476.10 RKO89806.1 - 0.15 11.8 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) UDPGT PF00201.18 RKO89807.1 - 4.6e-26 91.7 0.0 6.1e-26 91.3 0.0 1.1 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_trans_1_3 PF13528.6 RKO89807.1 - 0.021 14.1 0.0 0.037 13.3 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.16 RKO89807.1 - 0.062 13.3 0.0 0.095 12.7 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase family 28 C-terminal domain Glyco_transf_28 PF03033.20 RKO89807.1 - 0.13 12.3 0.0 0.26 11.3 0.0 1.5 1 0 0 1 1 1 0 Glycosyltransferase family 28 N-terminal domain Ytp1 PF10355.9 RKO89808.1 - 2.9e-41 141.5 24.5 6.3e-39 133.9 24.5 3.6 1 1 0 1 1 1 1 Protein of unknown function (Ytp1) DUF2427 PF10348.9 RKO89808.1 - 9.5e-19 67.1 0.1 9.5e-19 67.1 0.1 3.1 5 0 0 5 5 5 1 Domain of unknown function (DUF2427) THOC7 PF05615.13 RKO89810.1 - 9.9e-17 61.5 10.5 9.9e-17 61.5 10.5 2.0 2 0 0 2 2 2 1 Tho complex subunit 7 DUF641 PF04859.12 RKO89810.1 - 0.0039 17.5 4.3 0.0039 17.5 4.3 2.2 2 1 0 2 2 2 1 Plant protein of unknown function (DUF641) HR1 PF02185.16 RKO89810.1 - 0.034 14.3 5.0 0.034 14.3 5.0 1.8 2 1 0 2 2 2 0 Hr1 repeat Het-C PF07217.11 RKO89810.1 - 0.041 12.4 1.7 0.045 12.3 1.7 1.2 1 0 0 1 1 1 0 Heterokaryon incompatibility protein Het-C CCDC144C PF14915.6 RKO89810.1 - 0.05 12.7 9.8 0.026 13.7 7.7 1.6 1 1 0 1 1 1 0 CCDC144C protein coiled-coil region Mit_KHE1 PF10173.9 RKO89810.1 - 0.089 12.9 0.6 0.1 12.7 0.6 1.1 1 0 0 1 1 1 0 Mitochondrial K+-H+ exchange-related Bap31_Bap29_C PF18035.1 RKO89810.1 - 0.097 12.7 8.7 0.35 10.9 7.8 2.3 1 1 1 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain CwsA PF10814.8 RKO89810.1 - 0.11 12.7 8.6 2.3 8.4 0.3 2.2 2 0 0 2 2 2 0 Cell wall synthesis protein CwsA FlxA PF14282.6 RKO89810.1 - 0.16 11.9 12.4 2.2 8.3 10.3 2.2 1 1 1 2 2 2 0 FlxA-like protein DUF4407 PF14362.6 RKO89810.1 - 0.21 10.9 15.6 0.38 10.1 15.6 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TssO PF17561.2 RKO89810.1 - 0.21 11.7 3.9 0.29 11.3 3.8 1.3 1 1 0 1 1 1 0 Type VI secretion system, TssO Sec10 PF07393.11 RKO89810.1 - 0.25 9.7 5.4 0.33 9.3 5.4 1.2 1 1 0 1 1 1 0 Exocyst complex component Sec10 RTX_C PF08339.10 RKO89810.1 - 0.29 11.2 3.1 0.42 10.7 2.8 1.3 1 1 0 1 1 1 0 RTX C-terminal domain AAA_13 PF13166.6 RKO89810.1 - 0.33 9.6 9.5 0.4 9.3 9.5 1.1 1 0 0 1 1 1 0 AAA domain DUF1690 PF07956.11 RKO89810.1 - 0.56 10.6 10.4 0.52 10.7 9.4 1.4 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) V_ATPase_I PF01496.19 RKO89810.1 - 0.6 8.0 5.1 0.71 7.7 5.1 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FemAB PF02388.16 RKO89810.1 - 0.6 8.9 4.9 0.7 8.7 4.9 1.2 1 0 0 1 1 1 0 FemAB family Vfa1 PF08432.10 RKO89810.1 - 0.71 10.2 7.6 1.1 9.6 7.6 1.3 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 LMBR1 PF04791.16 RKO89810.1 - 0.72 8.7 5.9 0.85 8.5 5.9 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Spc7 PF08317.11 RKO89810.1 - 0.75 8.6 10.9 1 8.2 10.9 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein FUSC PF04632.12 RKO89810.1 - 1.2 7.6 7.6 1.3 7.5 7.6 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family DUF5345 PF17280.2 RKO89810.1 - 1.4 9.0 5.6 0.8 9.7 2.6 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5345) DUF724 PF05266.14 RKO89810.1 - 1.6 8.5 11.7 48 3.7 11.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF724) COG2 PF06148.11 RKO89810.1 - 2 8.5 7.2 1.3 9.1 4.1 1.9 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 YabA PF06156.13 RKO89810.1 - 2.3 8.9 5.3 4.1 8.1 5.2 1.7 1 1 0 1 1 1 0 Initiation control protein YabA Phage_Mu_Gam PF07352.12 RKO89810.1 - 4.8 7.1 13.3 2 8.3 8.3 2.1 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein APG6_N PF17675.1 RKO89810.1 - 6.3 7.3 15.6 78 3.8 15.6 2.2 1 1 0 1 1 1 0 Apg6 coiled-coil region CHD5 PF04420.14 RKO89810.1 - 7.8 6.3 5.8 9.2 6.1 1.7 2.1 1 1 1 2 2 2 0 CHD5-like protein UPF0242 PF06785.11 RKO89810.1 - 8.1 6.5 11.0 9.6 6.3 9.1 1.6 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Mannosyl_trans3 PF11051.8 RKO89811.1 - 4.5e-29 101.7 0.0 2e-20 73.3 0.0 2.2 2 0 0 2 2 2 2 Mannosyltransferase putative Vfa1 PF08432.10 RKO89811.1 - 4.9 7.4 10.7 9 6.6 10.7 1.4 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 S1-P1_nuclease PF02265.16 RKO89814.1 - 4e-13 49.8 0.0 5.1e-13 49.4 0.0 1.1 1 0 0 1 1 1 1 S1/P1 Nuclease ANAPC4_WD40 PF12894.7 RKO89815.1 - 0.00018 21.8 0.3 0.00093 19.4 0.1 2.2 3 1 0 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 RKO89815.1 - 0.0017 19.2 11.2 0.32 11.9 0.0 5.1 5 1 0 5 5 5 2 WD domain, G-beta repeat Ge1_WD40 PF16529.5 RKO89815.1 - 0.017 14.1 0.1 0.74 8.7 0.1 2.2 2 0 0 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein BBS2_Mid PF14783.6 RKO89815.1 - 0.079 13.0 0.0 1.3 9.1 0.0 2.4 2 1 0 2 2 2 0 Ciliary BBSome complex subunit 2, middle region UDPG_MGDP_dh_N PF03721.14 RKO89817.1 - 2e-61 206.9 0.0 3.6e-61 206.0 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.15 RKO89817.1 - 2.5e-34 117.8 0.1 2.3e-33 114.7 0.1 2.3 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.19 RKO89817.1 - 1.1e-29 102.5 0.0 2.4e-29 101.4 0.0 1.7 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain NAD_binding_2 PF03446.15 RKO89817.1 - 0.00029 21.1 0.0 0.35 11.0 0.0 2.8 2 1 0 2 2 2 2 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 RKO89817.1 - 0.0035 17.9 0.2 0.93 10.1 0.0 3.2 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent OTCace PF00185.24 RKO89817.1 - 0.021 14.9 0.1 0.4 10.7 0.0 2.2 2 0 0 2 2 2 0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Ldh_1_N PF00056.23 RKO89817.1 - 0.049 13.7 0.0 10 6.2 0.0 2.7 2 1 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 RKO89817.1 - 0.075 13.3 0.2 0.64 10.3 0.0 2.6 3 0 0 3 3 3 0 Saccharopine dehydrogenase NADP binding domain DEP PF00610.21 RKO89819.1 - 6.1e-11 42.2 0.0 7.5e-11 41.9 0.0 1.1 1 0 0 1 1 1 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) RhoGEF PF00621.20 RKO89820.1 - 9.8e-27 94.4 0.0 1.1e-26 94.2 0.0 1.0 1 0 0 1 1 1 1 RhoGEF domain NUDIX PF00293.28 RKO89822.1 - 1.7e-12 47.5 0.0 3.7e-12 46.4 0.0 1.5 2 0 0 2 2 2 1 NUDIX domain Translin PF01997.16 RKO89824.1 - 2.8e-50 171.2 0.0 3.2e-50 171.0 0.0 1.0 1 0 0 1 1 1 1 Translin family Pkinase PF00069.25 RKO89825.1 - 3.6e-44 151.1 0.0 4.2e-44 150.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO89825.1 - 7.6e-22 77.8 0.0 9e-22 77.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO89825.1 - 6.5e-05 22.4 0.0 0.00012 21.5 0.0 1.4 1 1 0 1 1 1 1 Kinase-like RL10P_insert PF17777.1 RKO89826.1 - 5e-19 68.1 0.0 5.9e-19 67.8 0.0 1.1 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P CSN8_PSD8_EIF3K PF10075.9 RKO89827.1 - 4.2e-14 52.7 0.0 5.4e-14 52.4 0.0 1.1 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family PCI PF01399.27 RKO89827.1 - 0.038 14.5 0.0 0.059 13.9 0.0 1.4 1 0 0 1 1 1 0 PCI domain UQ_con PF00179.26 RKO89828.1 - 1.6e-19 69.9 0.1 2e-19 69.6 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 RKO89828.1 - 0.018 15.3 0.1 0.019 15.3 0.1 1.3 1 0 0 1 1 1 0 RWD domain Per1 PF04080.13 RKO89829.1 - 6.8e-92 307.8 3.5 8.3e-92 307.5 3.5 1.1 1 0 0 1 1 1 1 Per1-like family DUF5489 PF17592.2 RKO89829.1 - 0.6 10.7 4.9 0.57 10.7 0.9 2.5 1 1 1 2 2 2 0 Family of unknown function (DUF5489) Aldedh PF00171.22 RKO89830.1 - 5.2e-11 41.7 0.1 5.9e-11 41.5 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family PRiA4_ORF3 PF07929.11 RKO89831.1 - 1.1e-25 90.3 0.1 3.9e-23 82.0 0.1 2.9 2 1 0 2 2 2 1 Plasmid pRiA4b ORF-3-like protein TPR_2 PF07719.17 RKO89831.1 - 2.6 8.4 5.8 2.6 8.4 0.1 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TMEM70 PF06979.12 RKO89832.1 - 2.8e-06 27.8 0.0 3.7e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Assembly, mitochondrial proton-transport ATP synth complex AIRC PF00731.20 RKO89832.1 - 0.099 12.2 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 AIR carboxylase Xpo1 PF08389.12 RKO89834.1 - 9.8e-06 25.7 0.5 0.00021 21.4 0.0 3.4 5 0 0 5 5 5 1 Exportin 1-like protein IBN_N PF03810.19 RKO89834.1 - 0.001 18.9 0.0 0.0037 17.1 0.0 2.0 2 0 0 2 2 2 1 Importin-beta N-terminal domain DUF3730 PF12530.8 RKO89834.1 - 0.1 12.1 0.0 0.94 9.0 0.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3730) Glyco_transf_28 PF03033.20 RKO89836.1 - 1.7e-26 92.9 0.0 5.4e-26 91.3 0.0 1.8 2 0 0 2 2 2 1 Glycosyltransferase family 28 N-terminal domain UDPGT PF00201.18 RKO89836.1 - 1.6e-05 23.9 0.0 2.4e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 UDP-glucoronosyl and UDP-glucosyl transferase Metallothio_11 PF02066.15 RKO89838.1 - 0.22 11.7 2.7 0.24 11.6 1.6 1.7 1 1 0 1 1 1 0 Metallothionein family 11 SRP54 PF00448.22 RKO89839.1 - 3.2e-78 261.9 0.6 6.4e-78 260.9 0.6 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 RKO89839.1 - 4.3e-31 107.5 4.4 4.3e-31 107.5 4.4 4.9 2 1 3 5 5 5 1 Signal peptide binding domain SRP54_N PF02881.19 RKO89839.1 - 1.8e-17 63.3 2.7 3.8e-17 62.3 2.7 1.6 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain AAA_33 PF13671.6 RKO89839.1 - 1.1e-06 28.9 0.9 4.2e-05 23.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 RKO89839.1 - 1.5e-05 24.7 2.7 4.5e-05 23.1 0.9 2.5 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 RKO89839.1 - 1.9e-05 23.8 0.2 0.00013 21.1 0.2 2.2 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB CLP1_P PF16575.5 RKO89839.1 - 9.3e-05 22.3 0.2 0.084 12.7 0.1 2.4 2 0 0 2 2 2 2 mRNA cleavage and polyadenylation factor CLP1 P-loop SRPRB PF09439.10 RKO89839.1 - 0.0002 20.9 1.0 0.25 10.7 0.1 2.4 1 1 0 2 2 2 2 Signal recognition particle receptor beta subunit CbiA PF01656.23 RKO89839.1 - 0.0002 21.4 0.0 0.001 19.2 0.0 2.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_16 PF13191.6 RKO89839.1 - 0.00035 21.0 0.0 0.0015 19.0 0.0 1.9 1 1 1 2 2 2 1 AAA ATPase domain AAA_17 PF13207.6 RKO89839.1 - 0.00058 20.3 0.2 0.0036 17.7 0.0 2.5 2 0 0 2 2 1 1 AAA domain MMR_HSR1 PF01926.23 RKO89839.1 - 0.0022 18.1 0.0 0.0087 16.1 0.0 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_22 PF13401.6 RKO89839.1 - 0.0033 17.7 0.1 0.014 15.7 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_31 PF13614.6 RKO89839.1 - 0.0039 17.1 0.0 0.0085 16.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain APS_kinase PF01583.20 RKO89839.1 - 0.0051 16.7 0.0 0.013 15.4 0.0 1.7 1 0 0 1 1 1 1 Adenylylsulphate kinase MobB PF03205.14 RKO89839.1 - 0.0056 16.6 0.0 0.012 15.6 0.0 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_30 PF13604.6 RKO89839.1 - 0.0072 16.1 1.4 0.0087 15.8 0.1 1.8 2 0 0 2 2 2 1 AAA domain ATP_bind_1 PF03029.17 RKO89839.1 - 0.0086 15.9 0.8 0.05 13.4 0.1 2.4 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein ResIII PF04851.15 RKO89839.1 - 0.011 15.7 0.3 0.041 13.9 0.3 1.8 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit DNA_pol3_chi PF04364.13 RKO89839.1 - 0.017 15.3 0.0 0.032 14.4 0.0 1.5 1 0 0 1 1 1 0 DNA polymerase III chi subunit, HolC AAA_18 PF13238.6 RKO89839.1 - 0.023 15.3 0.2 0.077 13.5 0.2 2.0 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 RKO89839.1 - 0.035 13.4 0.0 0.079 12.2 0.0 1.5 1 1 0 1 1 1 0 Zeta toxin AAA_28 PF13521.6 RKO89839.1 - 0.045 14.0 0.0 0.086 13.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 RKO89839.1 - 0.045 13.6 0.7 0.14 12.1 0.1 2.0 1 1 1 2 2 2 0 NTPase Thymidylate_kin PF02223.17 RKO89839.1 - 0.1 12.3 0.0 0.26 11.0 0.0 1.7 1 0 0 1 1 1 0 Thymidylate kinase 6PF2K PF01591.18 RKO89839.1 - 0.18 11.1 0.0 0.31 10.3 0.0 1.3 1 0 0 1 1 1 0 6-phosphofructo-2-kinase PduV-EutP PF10662.9 RKO89839.1 - 0.2 11.4 2.3 0.53 10.0 0.1 2.5 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation AAA PF00004.29 RKO89839.1 - 0.52 10.7 2.1 1.2 9.6 0.6 2.5 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) ArsA_ATPase PF02374.15 RKO89839.1 - 0.99 8.5 4.4 0.52 9.4 0.1 2.5 2 2 0 2 2 2 0 Anion-transporting ATPase Rav1p_C PF12234.8 RKO89844.1 - 9.1e-160 533.1 0.0 1.1e-159 532.8 0.0 1.1 1 0 0 1 1 1 1 RAVE protein 1 C terminal AMPK1_CBM PF16561.5 RKO89845.1 - 3.5e-13 49.6 0.5 4.7e-13 49.2 0.5 1.1 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase CBM_48 PF02922.18 RKO89845.1 - 0.001 19.4 0.1 0.0074 16.6 0.0 2.0 2 0 0 2 2 2 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CBM53 PF16760.5 RKO89845.1 - 0.0022 18.5 0.4 0.0035 17.9 0.4 1.4 1 0 0 1 1 1 1 Starch/carbohydrate-binding module (family 53) CBM_20 PF00686.19 RKO89845.1 - 0.024 14.5 0.1 0.06 13.3 0.1 1.7 1 1 0 1 1 1 0 Starch binding domain CLP_protease PF00574.23 RKO89846.1 - 9.7e-47 159.2 0.0 1.1e-46 159.0 0.0 1.0 1 0 0 1 1 1 1 Clp protease Glyco_transf_20 PF00982.21 RKO89846.1 - 0.052 12.2 0.0 0.064 11.9 0.0 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 20 TPR_19 PF14559.6 RKO89847.1 - 8.1e-39 132.0 30.7 1.4e-06 28.7 2.0 10.5 7 3 4 11 11 11 9 Tetratricopeptide repeat TPR_2 PF07719.17 RKO89847.1 - 1.5e-29 99.7 39.3 0.011 15.8 0.2 15.0 16 1 0 16 16 16 8 Tetratricopeptide repeat TPR_14 PF13428.6 RKO89847.1 - 2.7e-25 86.9 25.1 0.0001 22.8 0.1 13.3 8 2 7 15 15 13 6 Tetratricopeptide repeat TPR_16 PF13432.6 RKO89847.1 - 3.3e-24 85.3 12.2 1.5e-05 25.5 0.3 8.9 7 2 1 8 8 8 4 Tetratricopeptide repeat TPR_8 PF13181.6 RKO89847.1 - 6.3e-23 79.0 28.4 0.00015 21.7 0.0 11.3 12 0 0 12 12 11 6 Tetratricopeptide repeat TPR_1 PF00515.28 RKO89847.1 - 2.6e-20 71.3 34.2 0.0074 16.1 0.1 12.5 13 1 0 13 13 12 6 Tetratricopeptide repeat TPR_6 PF13174.6 RKO89847.1 - 6.7e-17 60.9 31.6 0.15 12.7 0.0 12.3 14 0 0 14 14 11 6 Tetratricopeptide repeat TPR_7 PF13176.6 RKO89847.1 - 1.5e-14 52.8 22.1 0.00078 19.3 0.0 10.2 11 0 0 11 11 10 3 Tetratricopeptide repeat TPR_12 PF13424.6 RKO89847.1 - 6e-13 48.9 27.8 0.0037 17.5 1.6 10.0 9 1 2 11 11 9 4 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO89847.1 - 2.1e-10 40.7 30.5 0.079 13.2 1.4 9.0 6 3 2 9 9 9 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_21 PF09976.9 RKO89847.1 - 1.8e-08 34.3 18.1 0.012 15.3 0.4 4.5 3 1 1 4 4 4 4 Tetratricopeptide repeat-like domain TPR_17 PF13431.6 RKO89847.1 - 1.7e-07 31.1 17.0 0.014 15.7 1.4 9.0 10 0 0 10 10 9 1 Tetratricopeptide repeat SNAP PF14938.6 RKO89847.1 - 5.3e-06 26.1 18.1 0.018 14.5 0.8 5.3 4 1 0 4 4 4 3 Soluble NSF attachment protein, SNAP TPR_11 PF13414.6 RKO89847.1 - 3.9e-05 23.2 25.6 0.009 15.7 0.1 8.1 9 1 1 10 10 10 2 TPR repeat TPR_4 PF07721.14 RKO89847.1 - 0.0014 19.1 1.3 0.74 10.6 0.2 4.8 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_MalT PF17874.1 RKO89847.1 - 0.012 15.0 18.4 0.76 9.1 2.8 5.3 4 1 1 5 5 5 0 MalT-like TPR region SRP_TPR_like PF17004.5 RKO89847.1 - 0.042 13.9 12.3 0.16 12.0 0.4 5.2 5 0 0 5 5 5 0 Putative TPR-like repeat HrpB1_HrpK PF09613.10 RKO89847.1 - 0.078 12.6 4.3 0.25 11.0 0.1 3.7 3 1 1 4 4 4 0 Bacterial type III secretion protein (HrpB1_HrpK) BTAD PF03704.17 RKO89847.1 - 0.079 13.4 1.7 10 6.6 0.1 3.8 2 2 1 3 3 3 0 Bacterial transcriptional activator domain YfdX PF10938.8 RKO89847.1 - 0.15 12.0 4.0 1.9 8.4 0.2 3.7 3 0 0 3 3 3 0 YfdX protein PPR PF01535.20 RKO89847.1 - 0.23 11.8 4.9 27 5.3 0.0 5.9 9 1 1 10 10 4 0 PPR repeat YfiO PF13525.6 RKO89847.1 - 0.77 9.5 14.0 2.9 7.6 0.0 5.9 4 3 3 8 8 8 0 Outer membrane lipoprotein RPN7 PF10602.9 RKO89847.1 - 0.89 9.2 15.0 2.1 8.1 0.1 5.8 3 3 2 6 6 6 0 26S proteasome subunit RPN7 TPR_10 PF13374.6 RKO89847.1 - 0.94 9.4 14.6 51 3.9 0.1 7.5 8 0 0 8 8 7 0 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.6 RKO89847.1 - 4.5 7.7 7.6 4.1 7.9 0.1 3.6 4 0 0 4 4 4 0 Alkyl sulfatase dimerisation TPR_20 PF14561.6 RKO89847.1 - 4.8 7.6 22.0 8.8 6.7 0.1 7.9 6 3 2 9 9 9 0 Tetratricopeptide repeat Clathrin PF00637.20 RKO89847.1 - 6.7 6.6 12.3 0.73 9.7 3.1 3.9 4 1 0 4 4 3 0 Region in Clathrin and VPS INSIG PF07281.12 RKO89849.1 - 1e-44 152.7 13.0 4.3e-44 150.7 13.0 1.9 1 1 0 1 1 1 1 Insulin-induced protein (INSIG) ThrE PF06738.12 RKO89849.1 - 0.17 11.3 3.8 0.32 10.3 3.8 1.5 1 0 0 1 1 1 0 Putative threonine/serine exporter DUF2632 PF10943.8 RKO89849.1 - 0.4 10.2 5.9 0.1 12.1 2.9 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2632) DUF202 PF02656.15 RKO89849.1 - 2.1 8.9 7.0 2.3 8.8 3.1 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF202) ABC_tran PF00005.27 RKO89852.1 - 5.1e-31 108.0 0.0 2.6e-17 63.6 0.0 2.6 2 0 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 RKO89852.1 - 1.5e-24 87.1 1.4 1.4e-15 57.7 0.0 3.1 3 0 0 3 3 3 2 ABC transporter transmembrane region AAA_29 PF13555.6 RKO89852.1 - 1e-06 28.4 1.0 0.0077 16.0 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_23 PF13476.6 RKO89852.1 - 7.5e-05 23.3 0.2 0.17 12.4 0.0 2.3 2 0 0 2 2 2 2 AAA domain MMR_HSR1 PF01926.23 RKO89852.1 - 0.00014 21.9 1.0 0.2 11.8 0.2 2.5 2 0 0 2 2 2 2 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 RKO89852.1 - 0.00029 20.8 0.0 0.35 10.7 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase AAA_21 PF13304.6 RKO89852.1 - 0.00029 20.7 2.5 0.27 11.0 0.0 3.1 3 0 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system T2SSE PF00437.20 RKO89852.1 - 0.00078 18.6 0.5 0.32 10.0 0.1 2.2 2 0 0 2 2 2 2 Type II/IV secretion system protein DUF87 PF01935.17 RKO89852.1 - 0.0019 18.3 1.3 1.7 8.7 0.3 2.4 2 0 0 2 2 2 2 Helicase HerA, central domain AAA_16 PF13191.6 RKO89852.1 - 0.0066 16.8 0.1 2.6 8.4 0.0 2.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 RKO89852.1 - 0.0074 16.6 0.2 7.7 6.8 0.0 2.9 3 0 0 3 3 3 1 AAA domain AAA_25 PF13481.6 RKO89852.1 - 0.042 13.4 0.5 3.7 7.1 0.0 2.5 2 0 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 RKO89852.1 - 0.045 13.8 0.2 1.3 9.1 0.0 2.4 2 0 0 2 2 2 0 Dynamin family FtsK_SpoIIIE PF01580.18 RKO89852.1 - 0.072 12.4 0.1 6.6 6.0 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_30 PF13604.6 RKO89852.1 - 0.073 12.8 1.1 0.9 9.2 0.1 2.2 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 RKO89852.1 - 0.081 12.4 1.1 5.2 6.4 0.1 2.9 2 1 0 3 3 3 0 RecF/RecN/SMC N terminal domain AAA_24 PF13479.6 RKO89852.1 - 0.12 12.0 0.3 1.1 8.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain Roc PF08477.13 RKO89852.1 - 0.18 12.0 0.1 24 5.2 0.1 2.5 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_7 PF12775.7 RKO89852.1 - 0.2 11.1 0.1 16 5.0 0.0 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region HSF_DNA-bind PF00447.17 RKO89854.1 - 2.4e-23 82.6 0.9 2.5e-23 82.5 0.9 1.0 1 0 0 1 1 1 1 HSF-type DNA-binding Ets PF00178.22 RKO89854.1 - 0.0094 16.4 0.1 0.012 16.0 0.1 1.3 1 1 0 1 1 1 1 Ets-domain Cdc6_C PF09079.11 RKO89854.1 - 0.034 14.1 0.0 0.041 13.9 0.0 1.1 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain GSH_synth_ATP PF03917.17 RKO89857.1 - 1.4e-74 251.1 0.0 1.6e-74 250.9 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 RKO89857.1 - 8.6e-18 64.7 0.2 1.3e-17 64.1 0.2 1.3 1 0 0 1 1 1 1 Eukaryotic glutathione synthase TPR_2 PF07719.17 RKO89858.1 - 9.3e-11 41.0 7.5 0.0014 18.6 0.1 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 RKO89858.1 - 1.1e-09 37.7 6.7 0.032 14.0 0.2 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat RPAP3_C PF13877.6 RKO89858.1 - 7.4e-07 29.6 0.0 2.1e-06 28.2 0.0 1.8 1 0 0 1 1 1 1 Potential Monad-binding region of RPAP3 TPR_9 PF13371.6 RKO89858.1 - 0.00088 19.4 2.6 0.001 19.2 0.3 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO89858.1 - 0.00096 19.7 6.8 0.074 13.7 2.2 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.6 RKO89858.1 - 0.0019 18.3 5.0 0.21 11.9 0.2 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_11 PF13414.6 RKO89858.1 - 0.023 14.4 1.9 0.19 11.5 0.0 2.7 2 1 0 2 2 2 0 TPR repeat TPR_12 PF13424.6 RKO89858.1 - 0.06 13.6 6.2 4.2 7.7 1.6 2.9 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO89858.1 - 0.78 10.7 2.8 2.6 9.1 0.2 2.9 2 1 1 3 3 3 0 Tetratricopeptide repeat Ras PF00071.22 RKO89860.1 - 1.8e-57 193.5 0.4 2.1e-57 193.3 0.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO89860.1 - 3.6e-21 75.6 0.0 5.3e-21 75.0 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO89860.1 - 4.5e-09 36.0 0.2 4.8e-09 35.9 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 RKO89860.1 - 7.4e-06 25.6 0.4 2e-05 24.2 0.1 1.8 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 RKO89860.1 - 0.00024 21.0 2.0 0.11 12.4 0.0 2.2 1 1 1 2 2 2 2 RsgA GTPase MMR_HSR1 PF01926.23 RKO89860.1 - 0.00028 20.9 0.1 0.00048 20.2 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase G-alpha PF00503.20 RKO89860.1 - 0.017 14.3 0.7 0.29 10.2 0.1 2.3 1 1 1 2 2 2 0 G-protein alpha subunit DALR_2 PF09190.11 RKO89860.1 - 0.14 12.7 0.0 0.25 11.8 0.0 1.4 1 0 0 1 1 1 0 DALR domain Oxysterol_BP PF01237.18 RKO89861.1 - 2.9e-118 395.0 0.7 9e-117 390.0 0.7 2.6 1 1 0 1 1 1 1 Oxysterol-binding protein D5_N PF08706.11 RKO89862.1 - 8.2e-10 39.1 0.5 2.3e-09 37.7 0.1 1.9 2 0 0 2 2 2 1 D5 N terminal like DUF1456 PF07308.13 RKO89862.1 - 0.034 14.5 0.2 0.14 12.5 0.2 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1456) PKcGMP_CC PF16808.5 RKO89863.1 - 2.3e-05 24.1 19.6 0.56 10.1 0.7 8.0 9 0 0 9 9 9 4 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF5082 PF16888.5 RKO89863.1 - 0.0016 18.7 2.9 0.0016 18.7 2.9 5.0 2 1 3 6 6 6 1 Domain of unknown function (DUF5082) Lebercilin PF15619.6 RKO89863.1 - 0.0062 16.2 6.6 0.0062 16.2 6.6 4.1 1 1 3 4 4 4 1 Ciliary protein causing Leber congenital amaurosis disease Golgin_A5 PF09787.9 RKO89863.1 - 0.0091 15.5 59.3 0.078 12.4 12.4 4.2 1 1 4 5 5 5 3 Golgin subfamily A member 5 Spc7 PF08317.11 RKO89863.1 - 8.2 5.2 58.1 1.1 8.1 14.0 3.8 1 1 1 3 3 3 0 Spc7 kinetochore protein DUF1748 PF08520.10 RKO89864.1 - 2.3e-07 30.6 0.0 2.8e-07 30.3 0.0 1.0 1 0 0 1 1 1 1 Fungal protein of unknown function (DUF1748) Ank_2 PF12796.7 RKO89865.1 - 4.2e-10 40.1 0.0 3.3e-05 24.4 0.0 3.1 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO89865.1 - 1.3e-06 28.6 3.9 0.0041 17.4 0.0 4.2 4 1 1 5 5 5 2 Ankyrin repeats (many copies) Ank PF00023.30 RKO89865.1 - 0.00079 19.8 1.7 0.7 10.4 0.1 4.5 4 1 0 4 4 4 1 Ankyrin repeat Ank_3 PF13606.6 RKO89865.1 - 0.0054 17.1 0.1 0.4 11.4 0.0 3.8 4 0 0 4 4 4 1 Ankyrin repeat Ank_4 PF13637.6 RKO89865.1 - 0.019 15.5 0.6 4.6 7.9 0.0 3.3 3 0 0 3 3 3 0 Ankyrin repeats (many copies) Phosducin PF02114.16 RKO89867.1 - 1.3e-22 80.0 0.0 3.4e-21 75.4 0.0 2.0 1 1 1 2 2 2 2 Phosducin SET PF00856.28 RKO89868.1 - 2e-08 34.8 0.0 2.5e-08 34.5 0.0 1.1 1 0 0 1 1 1 1 SET domain TUG-UBL1 PF11470.8 RKO89871.1 - 4.4e-15 55.6 0.1 1.3e-14 54.1 0.1 1.9 2 0 0 2 2 2 1 TUG ubiquitin-like domain UBX PF00789.20 RKO89871.1 - 9.6e-07 28.9 0.0 0.00017 21.8 0.0 2.5 2 0 0 2 2 2 2 UBX domain DUF1365 PF07103.11 RKO89872.1 - 2.6e-58 197.5 0.0 4e-58 196.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1365) UBN_AB PF14075.6 RKO89873.1 - 7.2e-05 22.6 0.2 0.00021 21.1 0.0 1.8 2 1 0 2 2 2 1 Ubinuclein conserved middle domain Tox-MPTase5 PF15641.6 RKO89874.1 - 0.15 12.1 0.2 0.28 11.2 0.2 1.4 1 0 0 1 1 1 0 Metallopeptidase toxin 5 DUF2420 PF10336.9 RKO89875.1 - 0.12 12.4 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2420) Peptidase_S10 PF00450.22 RKO89876.1 - 8.3e-60 203.3 2.5 1.1e-59 203.0 2.5 1.0 1 0 0 1 1 1 1 Serine carboxypeptidase FF PF01846.19 RKO89879.1 - 8.3e-33 112.3 9.5 6.4e-12 45.5 0.0 7.0 6 1 0 6 6 6 5 FF domain WW PF00397.26 RKO89879.1 - 1.2e-16 60.4 24.3 3.7e-09 36.5 6.3 3.1 3 0 0 3 3 3 2 WW domain RhoGAP-FF1 PF16512.5 RKO89879.1 - 2.4e-05 24.9 9.7 3.4 8.4 0.6 5.5 3 1 2 5 5 5 2 p190-A and -B Rho GAPs FF domain Glyco_hyd_101C PF17451.2 RKO89879.1 - 0.047 14.0 13.4 0.046 14.0 3.1 2.6 1 1 1 2 2 2 0 Glycosyl hydrolase 101 beta sandwich domain TetR_C_24 PF17932.1 RKO89879.1 - 0.11 12.7 0.2 0.11 12.7 0.2 3.4 6 0 0 6 6 6 0 Tetracyclin repressor-like, C-terminal domain CDC45 PF02724.14 RKO89879.1 - 1.3 7.2 22.7 2.4 6.3 22.7 1.4 1 0 0 1 1 1 0 CDC45-like protein Glyco_hydro_18 PF00704.28 RKO89880.1 - 3.2e-11 43.5 0.1 3.6e-11 43.3 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 Glyco_hydro_18 PF00704.28 RKO89881.1 - 0.016 15.0 0.0 0.023 14.4 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 18 SH PF01445.17 RKO89881.1 - 0.085 12.8 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 Viral small hydrophobic protein DUF4032 PF13224.6 RKO89881.1 - 0.22 11.4 0.3 0.6 10.0 0.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4032) Cbl_N2 PF02761.14 RKO89884.1 - 0.0067 17.1 0.0 6.4 7.6 0.0 2.3 2 0 0 2 2 2 2 CBL proto-oncogene N-terminus, EF hand-like domain JAB PF01398.21 RKO89885.1 - 1.8e-09 37.6 0.0 3.9e-09 36.5 0.0 1.4 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Myb_DNA-binding PF00249.31 RKO89885.1 - 4.2e-05 23.7 0.2 0.017 15.3 0.0 2.7 2 0 0 2 2 2 2 Myb-like DNA-binding domain Prok-JAB PF14464.6 RKO89885.1 - 0.00073 19.3 0.1 0.0021 17.8 0.1 1.8 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain UPF0172 PF03665.13 RKO89885.1 - 0.014 15.4 0.2 0.037 14.1 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0172) APH PF01636.23 RKO89886.1 - 0.0023 17.9 0.0 0.0048 16.9 0.0 1.5 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 RKO89886.1 - 0.0031 16.9 0.0 0.021 14.2 0.0 2.0 1 1 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 RKO89886.1 - 0.0096 15.3 0.0 0.017 14.5 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 RKO89886.1 - 0.033 12.9 0.0 0.058 12.2 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase HSDR_N_2 PF13588.6 RKO89886.1 - 0.036 14.1 0.0 0.072 13.1 0.0 1.4 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) MULE PF10551.9 RKO89889.1 - 0.022 15.1 0.0 0.065 13.6 0.0 1.8 1 0 0 1 1 1 0 MULE transposase domain ASH PF15780.5 RKO89895.1 - 6.2e-08 32.8 0.0 5.5 7.3 0.0 7.6 8 1 0 8 8 8 3 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin PapD-like PF14874.6 RKO89895.1 - 0.026 14.7 0.1 8.9 6.5 0.0 4.2 4 0 0 4 4 4 0 Flagellar-associated PapD-like Ribosomal_L4 PF00573.22 RKO89896.1 - 2.2e-41 141.7 0.8 2.9e-41 141.3 0.8 1.2 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Sirohm_synth_C PF14823.6 RKO89896.1 - 0.92 9.2 2.5 1.8 8.3 0.1 2.3 2 0 0 2 2 2 0 Sirohaem biosynthesis protein C-terminal Calpain_III PF01067.22 RKO89897.1 - 2.7e-12 47.2 0.0 4.9e-12 46.3 0.0 1.3 1 0 0 1 1 1 1 Calpain large subunit, domain III C2 PF00168.30 RKO89897.1 - 1.3e-06 28.6 0.0 0.00039 20.7 0.0 2.3 2 0 0 2 2 2 2 C2 domain Abhydrolase_6 PF12697.7 RKO89899.1 - 6.7e-05 23.6 0.2 8.3e-05 23.3 0.2 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 RKO89899.1 - 0.00021 20.6 0.0 0.00032 20.1 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DUF2974 PF11187.8 RKO89899.1 - 0.02 14.5 0.0 0.034 13.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) DUF2048 PF09752.9 RKO89899.1 - 0.083 12.0 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Abhydrolase domain containing 18 tRNA-synt_2b PF00587.25 RKO89900.1 - 0.027 14.5 0.0 0.027 14.5 0.0 1.0 1 0 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) Oxidored_FMN PF00724.20 RKO89902.1 - 0.0011 18.4 0.0 0.0011 18.4 0.0 1.1 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family UBM PF14377.6 RKO89904.1 - 9.3e-29 98.0 22.9 1.3e-09 37.2 3.5 4.8 3 1 1 4 4 4 3 Ubiquitin binding region UBA PF00627.31 RKO89904.1 - 1.3e-06 28.2 0.0 2.8e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 UBA/TS-N domain ERM PF00769.19 RKO89904.1 - 0.014 15.3 16.0 0.028 14.2 16.0 1.5 1 0 0 1 1 1 0 Ezrin/radixin/moesin family RIX1 PF08167.12 RKO89904.1 - 0.016 14.9 0.3 0.062 13.0 0.3 2.0 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis UIM PF02809.20 RKO89904.1 - 0.12 12.4 2.4 0.81 9.8 2.4 2.6 1 0 0 1 1 1 0 Ubiquitin interaction motif TAF4 PF05236.14 RKO89904.1 - 0.98 9.1 16.2 3.4 7.3 16.2 1.9 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family Promethin PF16015.5 RKO89905.1 - 0.034 14.0 11.5 0.078 12.9 11.5 1.5 1 0 0 1 1 1 0 Promethin FA_desaturase PF00487.24 RKO89905.1 - 1.1 9.1 6.2 3.7 7.3 6.0 1.8 1 1 0 1 1 1 0 Fatty acid desaturase Asp PF00026.23 RKO89907.1 - 8.6e-39 133.8 2.0 8.6e-39 133.8 2.0 1.4 2 0 0 2 2 2 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 RKO89907.1 - 0.00037 20.3 0.0 0.0014 18.4 0.0 1.8 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal GCP_N_terminal PF17681.1 RKO89908.1 - 1.6e-15 57.6 0.0 6.3e-14 52.3 0.0 2.8 2 1 0 2 2 2 1 Gamma tubulin complex component N-terminal GCP5-Mod21 PF14609.6 RKO89908.1 - 0.066 11.6 0.0 0.13 10.6 0.0 1.4 1 0 0 1 1 1 0 gamma-Tubulin ring complex non-core subunit mod21 CK2S PF15011.6 RKO89908.1 - 0.093 12.6 0.1 0.34 10.8 0.0 1.8 2 0 0 2 2 2 0 Casein Kinase 2 substrate SMC_N PF02463.19 RKO89909.1 - 2.1e-29 102.5 0.1 2.5e-29 102.3 0.1 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 RKO89909.1 - 1.3e-05 25.2 0.1 2.1e-05 24.5 0.1 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 RKO89909.1 - 0.00045 20.4 0.1 0.0019 18.4 0.1 2.0 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit DUF1664 PF07889.12 RKO89909.1 - 0.0013 18.8 9.4 0.045 13.8 0.5 3.7 2 2 2 4 4 4 2 Protein of unknown function (DUF1664) FUSC PF04632.12 RKO89909.1 - 0.0034 16.0 6.7 0.0034 16.0 6.7 2.2 2 0 0 2 2 2 2 Fusaric acid resistance protein family AAA_13 PF13166.6 RKO89909.1 - 0.007 15.1 6.9 0.91 8.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain Med21 PF11221.8 RKO89909.1 - 0.0072 16.6 12.9 0.0079 16.5 5.0 3.2 2 2 1 3 3 3 1 Subunit 21 of Mediator complex SlyX PF04102.12 RKO89909.1 - 0.0074 16.9 5.5 0.19 12.4 0.6 3.6 2 1 1 3 3 3 1 SlyX Spc7 PF08317.11 RKO89909.1 - 0.023 13.6 15.1 0.023 13.6 7.1 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein FlaC_arch PF05377.11 RKO89909.1 - 0.026 14.9 1.0 1.4 9.3 0.1 3.8 2 2 2 4 4 4 0 Flagella accessory protein C (FlaC) Atg14 PF10186.9 RKO89909.1 - 0.027 13.5 10.4 1.5 7.8 6.1 2.3 1 1 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF948 PF06103.11 RKO89909.1 - 0.037 14.3 6.2 0.79 10.0 1.1 3.2 3 0 0 3 3 2 0 Bacterial protein of unknown function (DUF948) Spectrin PF00435.21 RKO89909.1 - 0.047 14.2 10.9 0.23 11.9 1.9 3.4 3 1 1 4 4 4 0 Spectrin repeat CENP-F_leu_zip PF10473.9 RKO89909.1 - 0.061 13.4 14.7 0.046 13.7 6.1 3.0 2 2 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Muted PF14942.6 RKO89909.1 - 0.067 13.5 13.4 0.53 10.6 5.0 2.5 2 0 0 2 2 2 0 Organelle biogenesis, Muted-like protein IFT57 PF10498.9 RKO89909.1 - 0.23 10.4 9.3 0.89 8.5 2.2 2.7 2 2 0 2 2 2 0 Intra-flagellar transport protein 57 DUF4140 PF13600.6 RKO89909.1 - 0.24 11.9 16.9 5.2 7.6 4.0 4.6 3 2 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) NPV_P10 PF05531.12 RKO89909.1 - 0.26 11.8 2.7 16 6.0 0.1 3.9 2 2 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DASH_Dad2 PF08654.10 RKO89909.1 - 0.37 11.2 3.5 1.3 9.5 0.4 3.1 2 1 1 3 3 3 0 DASH complex subunit Dad2 TPR_MLP1_2 PF07926.12 RKO89909.1 - 0.38 10.8 16.8 0.95 9.5 9.9 2.9 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein BLOC1_2 PF10046.9 RKO89909.1 - 0.71 10.2 6.7 13 6.1 0.0 3.5 2 2 3 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Cytochrom_B562 PF07361.11 RKO89909.1 - 1.1 10.0 9.6 0.19 12.4 0.6 2.8 2 0 0 2 2 2 0 Cytochrome b562 GAS PF13851.6 RKO89909.1 - 1.9 7.8 14.0 0.54 9.6 1.2 2.7 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding Cortex-I_coil PF09304.10 RKO89909.1 - 2.5 8.4 12.4 0.17 12.1 2.9 3.4 2 2 0 3 3 3 0 Cortexillin I, coiled coil BST2 PF16716.5 RKO89909.1 - 4.6 7.9 8.1 1.3 9.6 1.3 3.2 2 2 1 4 4 3 0 Bone marrow stromal antigen 2 CENP-H PF05837.12 RKO89909.1 - 5.7 7.4 12.7 5.9 7.3 1.1 3.0 2 1 0 2 2 2 0 Centromere protein H (CENP-H) Nup54 PF13874.6 RKO89909.1 - 9.2 6.4 12.0 1.6 8.8 4.2 2.7 2 2 1 3 3 3 0 Nucleoporin complex subunit 54 Histidinol_dh PF00815.20 RKO89910.1 - 1.6e-161 537.9 5.6 2e-161 537.6 5.6 1.1 1 0 0 1 1 1 1 Histidinol dehydrogenase PRA-CH PF01502.18 RKO89910.1 - 6.1e-24 83.6 0.3 1.2e-23 82.7 0.3 1.5 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase PRA-PH PF01503.17 RKO89910.1 - 1.7e-13 50.8 0.0 4.4e-13 49.5 0.0 1.8 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase Abhydrolase_6 PF12697.7 RKO89911.1 - 0.002 18.8 0.1 0.0027 18.4 0.1 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family zf-MYND PF01753.18 RKO89912.1 - 2.3e-10 40.4 7.0 2.3e-10 40.4 7.0 1.9 2 0 0 2 2 2 1 MYND finger zf-C6H2 PF15801.5 RKO89912.1 - 1.4 9.3 10.7 0.13 12.6 5.2 2.1 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding Dynamin_M PF01031.20 RKO89916.1 - 2.8e-12 46.5 0.0 2.9e-10 39.9 0.0 2.3 1 1 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 RKO89916.1 - 1.7e-06 28.2 0.0 3.3e-06 27.3 0.0 1.4 1 0 0 1 1 1 1 Dynamin family Inhibitor_I24 PF10465.9 RKO89916.1 - 0.22 11.5 0.0 0.85 9.6 0.0 1.9 2 0 0 2 2 2 0 PinA peptidase inhibitor KH_1 PF00013.29 RKO89917.1 - 2.4e-49 165.0 9.1 5.3e-17 61.4 0.5 3.2 3 0 0 3 3 3 3 KH domain KH_2 PF07650.17 RKO89917.1 - 1.1e-11 44.4 2.2 0.0091 15.8 0.1 3.2 3 0 0 3 3 3 3 KH domain KH_4 PF13083.6 RKO89917.1 - 1.9e-10 40.5 3.0 0.0046 16.8 0.1 3.4 3 0 0 3 3 3 3 KH domain KH_5 PF13184.6 RKO89917.1 - 0.0076 16.3 2.2 0.37 10.9 0.1 3.1 3 0 0 3 3 3 1 NusA-like KH domain KH_1 PF00013.29 RKO89918.1 - 5.5e-32 109.4 2.7 4.5e-15 55.2 0.2 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 RKO89918.1 - 3.9e-07 29.8 0.2 0.0084 15.9 0.0 2.3 2 0 0 2 2 2 2 KH domain KH_4 PF13083.6 RKO89918.1 - 8.4e-07 28.8 0.2 0.0032 17.3 0.1 2.5 2 0 0 2 2 2 2 KH domain GCV_T PF01571.21 RKO89919.1 - 4.8e-32 111.3 0.0 6.6e-32 110.9 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 RKO89919.1 - 2e-20 72.5 0.1 3.1e-20 71.9 0.1 1.3 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain PDEase_I PF00233.19 RKO89920.1 - 4.2e-67 226.3 0.0 5.3e-67 226.0 0.0 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase Ank PF00023.30 RKO89920.1 - 0.12 12.8 0.5 4.1 8.0 0.0 2.9 3 0 0 3 3 3 0 Ankyrin repeat DHHC PF01529.20 RKO89922.1 - 1.8e-08 34.6 0.0 3.7e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 DHHC palmitoyltransferase DUF3098 PF11297.8 RKO89922.1 - 0.14 11.8 0.1 0.29 10.8 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3098) URO-D PF01208.17 RKO89924.1 - 7e-125 416.8 0.0 7.9e-125 416.6 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Sel1 PF08238.12 RKO89925.1 - 1.5e-19 70.0 2.0 9.2e-07 29.3 0.1 4.3 4 1 0 4 4 4 3 Sel1 repeat F-box-like PF12937.7 RKO89926.1 - 3e-08 33.4 2.0 6e-08 32.5 2.0 1.5 1 0 0 1 1 1 1 F-box-like TFIIE-A_C PF11521.8 RKO89926.1 - 0.044 14.1 0.1 0.11 12.8 0.1 1.6 1 0 0 1 1 1 0 C-terminal general transcription factor TFIIE alpha DUF1699 PF08004.11 RKO89926.1 - 0.13 12.0 0.0 3 7.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1699) LRR_4 PF12799.7 RKO89927.1 - 0.011 16.2 1.5 66 4.1 0.0 4.7 4 1 1 5 5 5 0 Leucine Rich repeats (2 copies) Slu7 PF11708.8 RKO89928.1 - 8.8e-109 363.4 10.2 8.8e-109 363.4 10.2 1.8 2 0 0 2 2 2 1 Pre-mRNA splicing Prp18-interacting factor zf-CCHC_4 PF14392.6 RKO89928.1 - 0.02 14.6 0.6 0.055 13.2 0.6 1.7 1 0 0 1 1 1 0 Zinc knuckle zf-CCHC PF00098.23 RKO89928.1 - 0.27 11.4 2.4 0.6 10.3 2.4 1.5 1 0 0 1 1 1 0 Zinc knuckle OSCP PF00213.18 RKO89929.1 - 2.7e-46 157.8 4.2 3.1e-46 157.6 4.2 1.0 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit OrgA_MxiK PF09482.10 RKO89929.1 - 0.075 12.9 0.0 0.73 9.7 0.0 2.0 1 1 1 2 2 2 0 Bacterial type III secretion apparatus protein (OrgA_MxiK) TerB_C PF15615.6 RKO89929.1 - 0.14 12.5 1.1 0.34 11.2 1.1 1.5 1 1 0 1 1 1 0 TerB-C domain LmjF365940-deam PF14421.6 RKO89931.1 - 0.037 13.6 9.3 2.8 7.5 1.1 3.4 3 1 0 3 3 3 0 A distinct subfamily of CDD/CDA-like deaminases Asp PF00026.23 RKO89932.1 - 1e-38 133.6 1.2 1.3e-38 133.2 1.2 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO89932.1 - 0.00027 21.2 2.9 0.012 15.9 1.3 2.8 2 1 0 2 2 2 1 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 RKO89932.1 - 0.031 14.9 1.1 12 6.6 0.1 3.0 2 1 0 2 2 2 0 Aspartyl protease gag-asp_proteas PF13975.6 RKO89932.1 - 0.055 14.0 0.2 14 6.3 0.0 3.2 2 1 0 2 2 2 0 gag-polyprotein putative aspartyl protease Borealin PF10512.9 RKO89933.1 - 0.008 16.1 0.1 0.052 13.5 0.0 2.2 2 0 0 2 2 2 1 Cell division cycle-associated protein 8 Bystin PF05291.11 RKO89934.1 - 5.4e-134 446.0 0.0 7.9e-134 445.5 0.0 1.2 1 0 0 1 1 1 1 Bystin UCH PF00443.29 RKO89936.1 - 1.9e-23 83.3 0.0 2.4e-23 82.9 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-UBP PF02148.19 RKO89936.1 - 7.8e-11 42.1 15.3 2.1e-10 40.8 10.3 2.8 3 0 0 3 3 3 1 Zn-finger in ubiquitin-hydrolases and other protein UCH_1 PF13423.6 RKO89936.1 - 9.7e-10 38.5 0.0 9.2e-07 28.7 0.0 2.2 2 0 0 2 2 2 2 Ubiquitin carboxyl-terminal hydrolase PEMT PF04191.13 RKO89938.1 - 9e-32 109.6 3.3 1.7e-31 108.8 3.3 1.5 1 0 0 1 1 1 1 Phospholipid methyltransferase Gelsolin PF00626.22 RKO89939.1 - 2.4e-36 123.5 0.0 3.6e-15 55.6 0.0 3.4 3 0 0 3 3 3 3 Gelsolin repeat HTH_Tnp_1 PF01527.20 RKO89940.1 - 0.026 14.8 0.3 0.069 13.5 0.3 1.8 1 0 0 1 1 1 0 Transposase TPR_10 PF13374.6 RKO89940.1 - 0.13 12.2 0.0 0.65 9.9 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat Calcipressin PF04847.12 RKO89940.1 - 0.18 11.6 1.5 0.28 10.9 1.5 1.3 1 0 0 1 1 1 0 Calcipressin zf-NF-X1 PF01422.17 RKO89941.1 - 7.6e-08 32.3 39.6 5.5e-06 26.3 14.7 14.6 15 1 0 15 15 15 5 NF-X1 type zinc finger R3H PF01424.22 RKO89941.1 - 0.0089 16.0 0.0 0.015 15.3 0.0 1.4 1 0 0 1 1 1 1 R3H domain Arrestin_N PF00339.29 RKO89942.1 - 4.6e-08 33.2 0.0 7.7e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain LDB19 PF13002.7 RKO89942.1 - 0.0021 17.8 0.0 0.004 16.9 0.0 1.4 1 0 0 1 1 1 1 Arrestin_N terminal like Ribosomal_L36e PF01158.18 RKO89943.1 - 8.1e-42 141.4 5.6 9.1e-42 141.2 5.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L36e RPN6_N PF18055.1 RKO89943.1 - 0.056 13.8 0.7 0.68 10.3 0.1 2.1 1 1 1 2 2 2 0 26S proteasome regulatory subunit RPN6 N-terminal domain TetR_C_9 PF14514.6 RKO89943.1 - 0.08 13.1 0.1 0.11 12.7 0.1 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Vasculin PF15337.6 RKO89947.1 - 0.0025 18.6 0.1 0.0025 18.6 0.1 2.0 2 0 0 2 2 2 1 Vascular protein family Vasculin-like 1 Pilosulin PF17499.2 RKO89947.1 - 0.23 11.6 1.0 0.43 10.8 1.0 1.4 1 0 0 1 1 1 0 Ant venom peptides Pro_isomerase PF00160.21 RKO89948.1 - 7e-40 136.9 0.6 7.7e-40 136.7 0.6 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AalphaY_MDB PF04611.12 RKO89949.1 - 0.16 12.0 7.0 0.79 9.7 0.3 2.1 1 1 1 2 2 2 0 Mating type protein A alpha Y mating type dependent binding region WSD PF15613.6 RKO89954.1 - 4.9e-09 36.6 0.0 4.4e-05 23.9 0.0 2.6 2 0 0 2 2 2 2 Williams-Beuren syndrome DDT (WSD), D-TOX E motif Nop10p PF04135.12 RKO89956.1 - 0.027 14.5 0.0 0.064 13.3 0.0 1.6 1 0 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family F-box-like PF12937.7 RKO89957.1 - 1.1e-07 31.6 4.2 1.6e-07 31.1 0.9 2.4 2 0 0 2 2 2 1 F-box-like F-box PF00646.33 RKO89957.1 - 4e-05 23.4 0.7 4e-05 23.4 0.7 2.1 2 0 0 2 2 2 1 F-box domain F-box_5 PF18511.1 RKO89957.1 - 0.022 14.3 0.1 0.078 12.6 0.1 2.0 1 0 0 1 1 1 0 F-box Ureidogly_lyase PF04115.12 RKO89958.1 - 1.6e-41 142.1 0.0 1.9e-41 141.9 0.0 1.1 1 0 0 1 1 1 1 Ureidoglycolate lyase Colipase_C PF02740.14 RKO89959.1 - 0.47 10.7 5.1 1.1 9.5 0.5 2.8 3 0 0 3 3 3 0 Colipase, C-terminal domain Cyclin PF08613.11 RKO89964.1 - 4.1e-08 33.8 0.0 2.3e-07 31.3 0.0 1.9 2 0 0 2 2 2 1 Cyclin Herpes_ori_bp PF02399.15 RKO89965.1 - 1.8e-13 49.5 0.0 3e-13 48.8 0.0 1.2 1 0 0 1 1 1 1 Origin of replication binding protein PriCT_2 PF08707.11 RKO89965.1 - 0.099 13.0 0.6 0.24 11.8 0.6 1.6 1 0 0 1 1 1 0 Primase C terminal 2 (PriCT-2) Kinesin PF00225.23 RKO89966.1 - 4.7e-98 328.2 0.6 5.5e-98 328.0 0.6 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO89966.1 - 9.2e-18 64.6 0.0 2.9e-17 63.0 0.0 1.8 2 0 0 2 2 2 1 Microtubule binding MFS_1 PF07690.16 RKO89967.1 - 7e-19 68.0 17.5 3.6e-18 65.6 17.5 2.0 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO89967.1 - 1.8e-06 27.1 3.0 2.3e-06 26.8 3.0 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter SH3_9 PF14604.6 RKO89968.1 - 3.1e-09 36.5 0.0 7.2e-09 35.4 0.0 1.7 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO89968.1 - 2.1e-06 27.2 0.0 3.4e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 RKO89968.1 - 0.0012 18.5 0.0 0.002 17.8 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain VEGFR-2_TMD PF17988.1 RKO89968.1 - 0.0059 16.0 5.8 0.015 14.8 5.8 1.6 1 0 0 1 1 1 1 VEGFR-2 Transmembrane domain DUF3823_C PF18003.1 RKO89968.1 - 0.062 14.0 1.1 0.12 13.1 1.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3823_C) Mid2 PF04478.12 RKO89968.1 - 0.079 12.8 0.1 0.079 12.8 0.1 2.4 1 1 0 2 2 1 0 Mid2 like cell wall stress sensor AJAP1_PANP_C PF15298.6 RKO89968.1 - 0.22 11.7 16.8 0.41 10.8 16.8 1.4 1 0 0 1 1 1 0 AJAP1/PANP C-terminus Amnionless PF14828.6 RKO89968.1 - 0.47 9.2 0.0 0.47 9.2 0.0 1.4 2 0 0 2 2 2 0 Amnionless Syndecan PF01034.20 RKO89968.1 - 0.74 9.8 6.9 0.065 13.2 1.8 1.8 2 0 0 2 2 2 0 Syndecan domain TMEM154 PF15102.6 RKO89968.1 - 1.3 8.9 18.4 6.9e+02 0.1 18.4 2.4 1 1 0 1 1 1 0 TMEM154 protein family Podoplanin PF05808.11 RKO89968.1 - 1.3 9.1 18.4 3.7 7.6 18.4 1.7 1 1 0 1 1 1 0 Podoplanin MFS_1 PF07690.16 RKO89969.1 - 1.3e-20 73.7 9.2 1.5e-20 73.5 9.2 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO89969.1 - 1.1e-09 37.6 6.8 1.3e-09 37.4 6.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1_like PF12832.7 RKO89969.1 - 0.0041 16.0 2.4 0.005 15.8 2.4 1.1 1 0 0 1 1 1 1 MFS_1 like family MFS_3 PF05977.13 RKO89969.1 - 0.016 13.6 0.2 0.02 13.3 0.2 1.1 1 0 0 1 1 1 0 Transmembrane secretion effector SH3_1 PF00018.28 RKO89970.1 - 3.5e-06 26.5 0.0 6.2e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 SH3 domain SH3_9 PF14604.6 RKO89970.1 - 0.00014 21.6 0.0 0.00026 20.8 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain Kelch_6 PF13964.6 RKO89970.1 - 0.0013 18.9 2.1 2.9 8.3 0.0 3.4 2 1 1 3 3 3 2 Kelch motif Cpn60_TCP1 PF00118.24 RKO89971.1 - 1.5e-156 521.9 16.0 1.7e-156 521.7 16.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family EAL PF00563.20 RKO89971.1 - 0.01 15.4 0.0 0.019 14.5 0.0 1.4 1 0 0 1 1 1 0 EAL domain TetR_C_14 PF17754.1 RKO89971.1 - 0.017 15.1 0.1 0.038 13.9 0.1 1.5 1 0 0 1 1 1 0 MftR C-terminal domain FAS_N PF17828.1 RKO89972.1 - 0.13 12.3 1.3 0.23 11.4 0.4 1.9 2 0 0 2 2 2 0 N-terminal domain in fatty acid synthase subunit beta SWIB PF02201.18 RKO89973.1 - 2.1e-12 46.8 2.5 3.1e-11 43.0 0.1 2.9 2 1 0 2 2 2 1 SWIB/MDM2 domain RNA_lig_T4_1 PF09511.10 RKO89974.1 - 8.1e-05 22.6 0.0 0.00011 22.1 0.0 1.2 1 0 0 1 1 1 1 RNA ligase DUF4570 PF15134.6 RKO89974.1 - 0.12 12.4 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4570) ARS2 PF04959.13 RKO89975.1 - 0.092 13.1 1.9 0.13 12.7 1.9 1.2 1 0 0 1 1 1 0 Arsenite-resistance protein 2 Viral_RdRp_C PF17501.2 RKO89977.1 - 0.12 12.8 0.5 0.21 12.0 0.5 1.4 1 0 0 1 1 1 0 Viral RNA-directed RNA polymerase SMODS PF18144.1 RKO89977.1 - 0.17 12.1 0.0 0.33 11.1 0.0 1.4 1 0 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain BUD22 PF09073.10 RKO89978.1 - 0.0006 19.3 10.4 0.00089 18.7 10.4 1.2 1 0 0 1 1 1 1 BUD22 DUF4746 PF15928.5 RKO89978.1 - 0.004 16.6 2.2 0.0059 16.1 2.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4746) AP3D1 PF06375.11 RKO89978.1 - 0.0066 16.7 7.0 0.012 15.9 7.0 1.4 1 0 0 1 1 1 1 AP-3 complex subunit delta-1 TPR_9 PF13371.6 RKO89978.1 - 0.031 14.4 0.3 0.031 14.4 0.3 1.7 2 0 0 2 2 2 0 Tetratricopeptide repeat U1snRNP70_N PF12220.8 RKO89978.1 - 0.12 13.0 5.6 0.14 12.8 3.8 2.0 2 0 0 2 2 2 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal DUF1168 PF06658.12 RKO89978.1 - 0.33 10.8 13.6 0.65 9.8 13.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1168) Med19 PF10278.9 RKO89978.1 - 0.81 9.6 9.1 1.4 8.8 9.1 1.3 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Coilin_N PF15862.5 RKO89978.1 - 3.2 7.6 7.0 6.1 6.6 7.0 1.4 1 0 0 1 1 1 0 Coilin N-terminus LZ_Tnp_IS66 PF13007.7 RKO89978.1 - 8.4 7.3 13.0 9 7.2 3.0 2.8 2 1 0 2 2 2 0 Transposase C of IS166 homeodomain Opi1 PF08618.10 RKO89979.1 - 1.9e-60 205.3 5.3 3.2e-55 188.1 0.0 3.2 2 1 1 3 3 3 2 Transcription factor Opi1 Perilipin PF03036.16 RKO89979.1 - 4e-10 39.3 0.2 6.2e-10 38.7 0.2 1.2 1 0 0 1 1 1 1 Perilipin family REF PF05755.12 RKO89979.1 - 0.067 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Rubber elongation factor protein (REF) SH3_9 PF14604.6 RKO89980.1 - 0.00021 21.1 0.0 0.41 10.5 0.0 2.5 2 0 0 2 2 2 2 Variant SH3 domain SH3_1 PF00018.28 RKO89980.1 - 0.0054 16.3 0.0 0.35 10.5 0.0 2.3 2 0 0 2 2 2 1 SH3 domain Kelch_3 PF13415.6 RKO89980.1 - 0.13 12.6 0.1 0.35 11.2 0.1 1.8 1 0 0 1 1 1 0 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO89980.1 - 0.13 11.8 0.4 0.26 10.9 0.4 1.5 1 0 0 1 1 1 0 Kelch motif SH3_9 PF14604.6 RKO89981.1 - 1.3e-09 37.8 0.0 2.3e-09 36.9 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO89981.1 - 2.4e-08 33.5 0.0 3.8e-08 32.8 0.0 1.4 1 0 0 1 1 1 1 SH3 domain PAN_3 PF08277.12 RKO89981.1 - 7.5e-06 25.7 1.1 7.5e-06 25.7 1.1 2.4 2 0 0 2 2 2 1 PAN-like domain SH3_2 PF07653.17 RKO89981.1 - 0.0002 21.0 0.0 0.00039 20.1 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain PTP_tm PF18861.1 RKO89981.1 - 0.067 13.2 0.3 0.12 12.4 0.1 1.5 2 0 0 2 2 2 0 Transmembrane domain of protein tyrosine phosphatase, receptor type J PhoR PF11808.8 RKO89981.1 - 0.067 13.6 1.2 8.8 6.8 0.0 2.6 3 0 0 3 3 3 0 Phosphate regulon sensor protein PhoR PAN_4 PF14295.6 RKO89981.1 - 0.31 11.0 11.4 0.41 10.6 0.5 2.7 2 0 0 2 2 2 0 PAN domain AA_permease PF00324.21 RKO89982.1 - 4.4e-122 408.1 49.8 5.2e-122 407.8 49.8 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 RKO89982.1 - 1.1e-47 162.8 55.2 1.4e-47 162.5 55.2 1.0 1 0 0 1 1 1 1 Amino acid permease S_4TM PF18159.1 RKO89982.1 - 1.6 8.0 7.8 1.6 8.0 0.0 2.9 3 0 0 3 3 3 0 SMODS-associating 4TM effector domain Peptidase_M24 PF00557.24 RKO89984.1 - 3.9e-46 157.4 0.0 5.1e-46 157.0 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 RKO89984.1 - 0.00014 22.5 0.0 0.00043 20.9 0.0 1.8 2 0 0 2 2 2 1 Creatinase/Prolidase N-terminal domain KCH PF16944.5 RKO89985.1 - 1.6e-58 198.5 6.9 2.1e-58 198.1 6.9 1.2 1 0 0 1 1 1 1 Fungal potassium channel B12D PF06522.11 RKO89986.1 - 0.02 14.7 0.2 0.076 12.8 0.2 2.0 1 0 0 1 1 1 0 NADH-ubiquinone reductase complex 1 MLRQ subunit ACBP PF00887.19 RKO89988.1 - 9e-28 96.3 0.9 1e-27 96.2 0.9 1.0 1 0 0 1 1 1 1 Acyl CoA binding protein DUF4203 PF13886.6 RKO89990.1 - 0.1 12.3 1.1 0.68 9.6 0.5 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4203) DNA_pol_B PF00136.21 RKO89993.1 - 7.6e-32 110.6 2.6 1.5e-17 63.5 0.8 2.2 1 1 1 2 2 2 2 DNA polymerase family B DNA_pol_B_2 PF03175.13 RKO89993.1 - 0.0024 16.8 0.4 0.0054 15.7 0.0 1.6 2 0 0 2 2 2 1 DNA polymerase type B, organellar and viral Glyco_hydro_16 PF00722.21 RKO89995.1 - 2.5e-10 40.1 0.0 3.3e-10 39.7 0.0 1.4 1 1 0 1 1 1 1 Glycosyl hydrolases family 16 NOA36 PF06524.12 RKO89998.1 - 1.8 7.8 3.7 3.3 7.0 3.7 1.3 1 0 0 1 1 1 0 NOA36 protein Keratin_assoc PF09775.9 RKO90000.1 - 0.15 11.8 4.6 0.1 12.3 1.2 2.1 2 0 0 2 2 2 0 Keratinocyte-associated protein 2 FUSC-like PF12805.7 RKO90000.1 - 0.31 10.1 1.1 0.48 9.5 1.1 1.2 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS Chitin_synth_1 PF01644.17 RKO90001.1 - 9.9e-30 103.7 0.0 1.2e-29 103.4 0.0 1.1 1 0 0 1 1 1 1 Chitin synthase Chitin_synth_1N PF08407.11 RKO90001.1 - 4.2e-09 36.2 0.0 6.4e-09 35.6 0.0 1.3 1 0 0 1 1 1 1 Chitin synthase N-terminal PTH2 PF01981.16 RKO90001.1 - 0.11 12.7 0.4 0.34 11.2 0.4 1.8 1 1 0 1 1 1 0 Peptidyl-tRNA hydrolase PTH2 Pkinase PF00069.25 RKO90005.1 - 6.5e-11 42.1 0.6 7.8e-11 41.8 0.6 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO90005.1 - 5.2e-05 22.7 0.1 6.6e-05 22.3 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Imm41 PF15592.6 RKO90005.1 - 0.63 10.4 3.2 2.6 8.4 0.6 2.0 1 1 1 2 2 2 0 Immunity protein 41 SUIM_assoc PF16619.5 RKO90006.1 - 0.0022 18.0 0.0 0.0022 18.0 0.0 11.8 4 2 3 7 7 7 2 Unstructured region C-term to UIM in Ataxin3 DUF572 PF04502.13 RKO90006.1 - 0.15 11.7 38.3 0.16 11.6 28.6 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF572) DNA_pol_delta_4 PF04081.13 RKO90007.1 - 1.3e-14 54.7 0.7 3.3e-14 53.4 0.7 1.7 1 0 0 1 1 1 1 DNA polymerase delta, subunit 4 TRP PF06011.12 RKO90009.1 - 1.6e-22 79.9 8.8 2.6e-21 75.9 8.8 2.3 1 1 0 1 1 1 1 Transient receptor potential (TRP) ion channel F-box-like PF12937.7 RKO90010.1 - 0.0007 19.4 0.4 0.0014 18.5 0.4 1.5 1 0 0 1 1 1 1 F-box-like Arm PF00514.23 RKO90011.1 - 8.8e-44 146.3 15.6 2.8e-13 49.4 0.2 6.2 6 1 0 6 6 6 5 Armadillo/beta-catenin-like repeat HEAT_2 PF13646.6 RKO90011.1 - 3.3e-14 53.1 19.8 6.6e-05 23.2 0.4 4.4 1 1 4 5 5 5 5 HEAT repeats HEAT_EZ PF13513.6 RKO90011.1 - 2.3e-13 50.3 9.6 0.00047 20.6 0.1 5.4 5 1 1 6 6 5 3 HEAT-like repeat HEAT PF02985.22 RKO90011.1 - 3.1e-13 48.7 14.3 0.0018 18.4 0.1 6.0 7 0 0 7 7 7 4 HEAT repeat Arm_2 PF04826.13 RKO90011.1 - 1.6e-07 31.0 0.1 1.9e-05 24.3 0.1 2.0 2 0 0 2 2 2 1 Armadillo-like DUF3361 PF11841.8 RKO90011.1 - 1.6e-06 28.2 0.0 0.0032 17.4 0.0 2.4 1 1 0 2 2 2 2 Domain of unknown function (DUF3361) Adaptin_N PF01602.20 RKO90011.1 - 2.9e-06 26.1 2.1 1.2e-05 24.1 2.1 2.1 1 1 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 RKO90011.1 - 6.6e-06 26.3 0.1 0.025 14.6 0.0 2.6 1 1 0 2 2 2 2 non-SMC mitotic condensation complex subunit 1 DUF5578 PF17741.1 RKO90011.1 - 5.5e-05 22.7 0.4 1.1 8.6 0.1 3.2 2 1 1 3 3 3 2 Family of unknown function (DUF5578) V-ATPase_H_C PF11698.8 RKO90011.1 - 9.7e-05 22.5 0.0 0.07 13.2 0.0 3.1 2 1 1 3 3 3 1 V-ATPase subunit H V-ATPase_H_N PF03224.14 RKO90011.1 - 0.00025 20.4 0.0 0.0041 16.4 0.0 2.3 1 1 0 1 1 1 1 V-ATPase subunit H IFRD PF05004.13 RKO90011.1 - 0.00078 18.6 3.1 1 8.4 0.1 3.9 1 1 2 4 4 4 1 Interferon-related developmental regulator (IFRD) HEAT_PBS PF03130.16 RKO90011.1 - 0.0016 19.0 8.2 1.9 9.4 0.1 5.4 6 1 0 6 6 4 1 PBS lyase HEAT-like repeat NopRA1 PF16201.5 RKO90011.1 - 0.0049 16.5 0.2 1.8 8.1 0.0 2.8 1 1 2 3 3 3 1 Nucleolar pre-ribosomal-associated protein 1 KAP PF05804.12 RKO90011.1 - 0.02 13.0 0.0 0.026 12.7 0.0 1.1 1 0 0 1 1 1 0 Kinesin-associated protein (KAP) Vac14_Fab1_bd PF12755.7 RKO90011.1 - 0.028 15.0 0.0 15 6.3 0.0 2.7 2 1 0 2 2 2 0 Vacuolar 14 Fab1-binding region UNC45-central PF11701.8 RKO90011.1 - 0.035 14.1 0.8 0.66 9.9 0.1 2.7 1 1 0 2 2 2 0 Myosin-binding striated muscle assembly central PhnI PF05861.12 RKO90011.1 - 0.063 12.1 0.2 0.31 9.8 0.0 2.0 2 1 1 3 3 3 0 Bacterial phosphonate metabolism protein (PhnI) TPR_10 PF13374.6 RKO90011.1 - 0.4 10.6 2.8 1.5 8.8 0.0 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat SelR PF01641.18 RKO90013.1 - 2.2e-27 95.5 0.2 2.6e-27 95.3 0.2 1.0 1 0 0 1 1 1 1 SelR domain zf-Mss51 PF13824.6 RKO90013.1 - 0.38 10.9 2.6 2.6 8.2 2.0 2.6 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 PPR_2 PF13041.6 RKO90014.1 - 0.00066 19.8 0.0 1 9.6 0.0 3.8 4 0 0 4 4 4 2 PPR repeat family PPR_3 PF13812.6 RKO90014.1 - 0.0023 18.0 0.0 2.4 8.3 0.0 3.0 3 0 0 3 3 3 2 Pentatricopeptide repeat domain cNMP_binding PF00027.29 RKO90016.1 - 7.9e-23 80.4 0.0 9.6e-23 80.1 0.0 1.1 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain Cupin_3 PF05899.12 RKO90016.1 - 0.083 12.6 0.1 0.15 11.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Cupin_2 PF07883.11 RKO90016.1 - 0.2 11.4 0.1 0.27 11.0 0.1 1.2 1 0 0 1 1 1 0 Cupin domain Pkinase PF00069.25 RKO90019.1 - 1.3e-11 44.4 0.0 1.4e-11 44.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO90019.1 - 0.00038 19.8 0.0 0.00039 19.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO90019.1 - 0.14 11.5 0.0 0.14 11.5 0.0 1.0 1 0 0 1 1 1 0 Kinase-like Spc29 PF17082.5 RKO90020.1 - 0.00054 19.9 0.1 0.0015 18.4 0.1 1.7 1 0 0 1 1 1 1 Spindle Pole Component 29 CLZ PF16526.5 RKO90020.1 - 0.0026 18.1 5.9 0.0026 18.1 5.9 2.6 2 0 0 2 2 2 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels FAM76 PF16046.5 RKO90020.1 - 2.2 7.6 5.0 0.3 10.4 0.3 2.1 2 0 0 2 2 2 0 FAM76 protein Pil1 PF13805.6 RKO90021.1 - 1.7e-27 96.6 1.5 2e-27 96.4 1.5 1.0 1 0 0 1 1 1 1 Eisosome component PIL1 FAM153 PF15722.5 RKO90021.1 - 0.012 15.9 0.4 4.4 7.7 0.0 2.3 2 0 0 2 2 2 0 FAM153 family PSII_Pbs27 PF13326.6 RKO90021.1 - 0.039 14.3 1.0 0.039 14.3 1.0 1.7 1 1 0 1 1 1 0 Photosystem II Pbs27 Baculo_PEP_C PF04513.12 RKO90021.1 - 0.052 13.6 0.1 0.12 12.4 0.1 1.6 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF4349 PF14257.6 RKO90021.1 - 0.078 12.4 2.3 0.18 11.3 1.8 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4349) Fib_alpha PF08702.10 RKO90021.1 - 0.12 12.6 0.5 0.21 11.8 0.3 1.5 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family GntR PF00392.21 RKO90021.1 - 0.12 12.1 0.0 0.37 10.5 0.0 1.8 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family DUF4776 PF16003.5 RKO90021.1 - 0.12 11.3 3.6 0.14 11.1 3.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4776) Sec34 PF04136.15 RKO90021.1 - 0.13 12.1 1.6 0.26 11.2 1.6 1.4 1 0 0 1 1 1 0 Sec34-like family DUF2388 PF09498.10 RKO90021.1 - 0.37 10.8 2.5 0.71 9.9 0.3 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF2388) DUF4200 PF13863.6 RKO90021.1 - 0.64 10.4 9.7 9.9 6.6 2.8 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) YtxH PF12732.7 RKO90021.1 - 2.1 8.9 10.3 1.4e+02 3.1 10.3 2.5 1 1 0 1 1 1 0 YtxH-like protein MAS20 PF02064.15 RKO90021.1 - 3.9 7.6 7.9 0.27 11.3 1.6 1.9 1 1 1 2 2 2 0 MAS20 protein import receptor peroxidase PF00141.23 RKO90024.1 - 3.5e-10 40.0 0.0 1.9e-08 34.3 0.0 2.1 1 1 0 1 1 1 1 Peroxidase Ank_4 PF13637.6 RKO90025.1 - 0.024 15.2 0.1 12 6.6 0.0 2.3 2 0 0 2 2 2 0 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO90025.1 - 0.051 13.9 0.0 1.4 9.3 0.0 2.7 2 1 1 3 3 3 0 Ankyrin repeats (many copies) LEA_1 PF03760.15 RKO90027.1 - 0.023 15.4 2.4 0.037 14.7 2.4 1.3 1 0 0 1 1 1 0 Late embryogenesis abundant (LEA) group 1 CCDC50_N PF15295.6 RKO90028.1 - 0.00039 20.6 7.1 0.00063 19.9 7.1 1.2 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 50 N-terminus ORC6 PF05460.13 RKO90028.1 - 2.3 7.4 10.9 0.068 12.4 0.7 2.2 1 1 1 2 2 2 0 Origin recognition complex subunit 6 (ORC6) zf-MYND PF01753.18 RKO90030.1 - 9.9e-08 31.9 13.1 9.9e-08 31.9 13.1 2.4 3 0 0 3 3 3 1 MYND finger MaoC_dehydratas PF01575.19 RKO90031.1 - 1.6e-27 95.5 0.0 2.7e-27 94.8 0.0 1.3 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 RKO90031.1 - 3.1e-06 27.4 0.0 0.00011 22.3 0.0 2.4 2 1 0 2 2 2 1 N-terminal half of MaoC dehydratase GTP_EFTU PF00009.27 RKO90033.1 - 4.5e-40 137.3 0.0 6.5e-40 136.7 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 RKO90033.1 - 2.7e-31 108.2 0.1 9.3e-31 106.4 0.1 1.9 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 RKO90033.1 - 5e-13 49.2 0.1 1.3e-12 47.9 0.1 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 RKO90033.1 - 0.0065 16.5 0.1 0.056 13.5 0.1 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 RKO90033.1 - 0.065 13.1 0.1 0.19 11.6 0.1 1.8 1 0 0 1 1 1 0 Elongation factor Tu domain 4 Cob_adeno_trans PF01923.18 RKO90033.1 - 0.09 12.9 0.0 5.3 7.2 0.0 2.3 2 0 0 2 2 2 0 Cobalamin adenosyltransferase Septin PF00735.18 RKO90034.1 - 1.9e-118 394.9 0.4 2.1e-118 394.7 0.4 1.0 1 0 0 1 1 1 1 Septin MMR_HSR1 PF01926.23 RKO90034.1 - 5e-08 33.0 0.0 8.2e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 RKO90034.1 - 3.2e-06 27.2 1.6 8.7e-05 22.5 1.2 2.7 2 1 0 2 2 2 1 RsgA GTPase GTP_EFTU PF00009.27 RKO90034.1 - 8.6e-06 25.4 0.3 0.00026 20.6 0.0 2.3 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain AIG1 PF04548.16 RKO90034.1 - 2.3e-05 23.8 0.0 3.7e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.23 RKO90034.1 - 0.00018 21.6 0.4 0.00075 19.6 0.3 2.1 1 1 0 1 1 1 1 Dynamin family Ras PF00071.22 RKO90034.1 - 0.00043 19.9 0.0 0.001 18.7 0.0 1.6 1 0 0 1 1 1 1 Ras family ABC_tran PF00005.27 RKO90034.1 - 0.00044 20.8 0.0 0.0046 17.5 0.0 2.1 2 0 0 2 2 2 1 ABC transporter Roc PF08477.13 RKO90034.1 - 0.00068 19.8 0.0 0.0013 19.0 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase AAA_22 PF13401.6 RKO90034.1 - 0.0017 18.6 0.1 0.0053 17.0 0.1 1.9 2 1 0 2 2 1 1 AAA domain AAA_16 PF13191.6 RKO90034.1 - 0.0042 17.5 0.0 0.0059 17.0 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 RKO90034.1 - 0.015 15.0 0.0 0.029 14.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATP_bind_1 PF03029.17 RKO90034.1 - 0.016 15.0 0.2 5.7 6.6 0.0 2.8 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein NB-ARC PF00931.22 RKO90034.1 - 0.018 14.2 0.0 0.031 13.4 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_24 PF13479.6 RKO90034.1 - 0.041 13.6 0.0 0.061 13.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 RKO90034.1 - 0.043 14.2 0.1 0.12 12.7 0.0 1.8 2 0 0 2 2 2 0 RNA helicase TSNAXIP1_N PF15739.5 RKO90034.1 - 0.078 13.4 0.0 0.18 12.2 0.0 1.6 1 0 0 1 1 1 0 Translin-associated factor X-interacting N-terminus Sigma54_activat PF00158.26 RKO90034.1 - 0.083 12.6 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain NACHT PF05729.12 RKO90034.1 - 0.19 11.7 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 NACHT domain Nop14 PF04147.12 RKO90035.1 - 5 5.2 52.0 0.14 10.3 11.8 3.0 3 0 0 3 3 3 0 Nop14-like family DAGK_cat PF00781.24 RKO90038.1 - 5.1e-24 84.3 0.0 7e-24 83.8 0.0 1.2 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain Abhydrolase_1 PF00561.20 RKO90039.1 - 5.2e-26 91.8 0.0 6.4e-26 91.5 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 RKO90039.1 - 1.3e-10 41.0 0.0 2.5e-10 40.0 0.0 1.5 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO90039.1 - 1.2e-07 32.6 0.5 1.7e-07 32.1 0.5 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Ndr PF03096.14 RKO90039.1 - 0.0015 17.3 0.0 0.0024 16.6 0.0 1.2 1 0 0 1 1 1 1 Ndr family Peptidase_S28 PF05577.12 RKO90039.1 - 0.0018 17.1 0.0 0.0026 16.6 0.0 1.2 1 0 0 1 1 1 1 Serine carboxypeptidase S28 HCV_NS4a PF01006.20 RKO90040.1 - 0.073 12.8 0.2 0.26 11.0 0.2 2.0 1 0 0 1 1 1 0 Hepatitis C virus non-structural protein NS4a DUF3742 PF12553.8 RKO90040.1 - 0.83 9.8 3.8 3.7 7.7 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3742) RRP36 PF06102.12 RKO90042.1 - 5e-23 81.9 14.9 6e-23 81.6 14.9 1.1 1 0 0 1 1 1 1 rRNA biogenesis protein RRP36 BUD22 PF09073.10 RKO90043.1 - 0.84 8.9 14.3 1.9 7.8 14.3 1.6 1 0 0 1 1 1 0 BUD22 Tub_N PF16322.5 RKO90044.1 - 5.7 7.3 10.6 0.093 13.1 0.5 2.5 2 1 0 2 2 2 0 Tubby N-terminal RRP36 PF06102.12 RKO90045.1 - 5e-23 81.9 14.9 6e-23 81.6 14.9 1.1 1 0 0 1 1 1 1 rRNA biogenesis protein RRP36 SH3_9 PF14604.6 RKO90047.1 - 1.2e-07 31.4 0.0 2.3e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain SKG6 PF08693.10 RKO90047.1 - 0.00012 21.5 0.8 0.00012 21.5 0.8 3.2 3 0 0 3 3 3 1 Transmembrane alpha-helix domain SH3_1 PF00018.28 RKO90047.1 - 0.00024 20.6 0.0 0.00052 19.6 0.0 1.6 1 0 0 1 1 1 1 SH3 domain Ntox5 PF15543.6 RKO90047.1 - 0.37 10.6 1.5 0.83 9.5 1.5 1.5 1 0 0 1 1 1 0 Bacterial toxin 5 DUF3455 PF11937.8 RKO90048.1 - 2.6e-22 79.9 0.3 1.5e-21 77.4 0.0 2.1 2 1 0 2 2 2 1 Protein of unknown function (DUF3455) Y2_Tnp PF04986.13 RKO90051.1 - 0.0079 16.3 0.3 4.5 7.3 0.0 2.1 2 0 0 2 2 2 2 Putative transposase Ribosomal_L30_N PF08079.12 RKO90052.1 - 5e-28 97.2 17.8 5e-28 97.2 17.8 1.6 2 0 0 2 2 2 1 Ribosomal L30 N-terminal domain Ribosomal_L30 PF00327.20 RKO90052.1 - 1.1e-18 66.8 0.6 1.1e-18 66.8 0.6 1.7 2 0 0 2 2 2 1 Ribosomal protein L30p/L7e TruD PF01142.18 RKO90058.1 - 5.9e-71 239.5 0.0 1.9e-70 237.8 0.0 1.7 1 1 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) Mitoc_mL59 PF18126.1 RKO90059.1 - 0.00092 19.5 0.7 0.0017 18.6 0.7 1.5 1 0 0 1 1 1 1 Mitochondrial ribosomal protein mL59 CR6_interact PF10147.9 RKO90059.1 - 0.0041 16.9 1.2 0.0082 15.9 0.4 1.8 2 0 0 2 2 2 1 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 F-box-like PF12937.7 RKO90061.1 - 2.3e-07 30.6 0.1 8.3e-07 28.8 0.1 2.0 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO90061.1 - 0.00011 22.0 0.0 0.0003 20.6 0.0 1.8 1 0 0 1 1 1 1 F-box domain F-box-like PF12937.7 RKO90062.1 - 0.0081 16.0 2.4 0.011 15.6 0.3 2.2 2 0 0 2 2 2 1 F-box-like BP28CT PF08146.12 RKO90063.1 - 1.4e-36 125.7 0.1 4.6e-36 124.1 0.1 2.0 1 0 0 1 1 1 1 BP28CT (NUC211) domain HEAT PF02985.22 RKO90063.1 - 0.0068 16.6 11.9 0.078 13.3 0.3 5.5 6 0 0 6 6 6 2 HEAT repeat ECR1_N PF14382.6 RKO90064.1 - 1.6e-14 53.4 2.3 3.5e-14 52.3 2.3 1.6 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region EXOSC1 PF10447.9 RKO90064.1 - 0.00054 20.6 0.4 0.12 13.0 0.3 2.4 1 1 1 2 2 2 2 Exosome component EXOSC1/CSL4 CAF1 PF04857.20 RKO90065.1 - 2.7e-20 72.8 0.2 3.7e-09 36.2 0.1 2.6 1 1 1 2 2 2 2 CAF1 family ribonuclease DUF2866 PF11065.8 RKO90068.1 - 0.0086 16.1 0.1 0.013 15.5 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2866) SBF PF01758.16 RKO90069.1 - 0.0082 15.8 0.3 0.018 14.7 0.1 1.6 2 0 0 2 2 2 1 Sodium Bile acid symporter family Sec7_N PF12783.7 RKO90070.1 - 0.014 15.4 0.3 10 6.0 0.0 2.8 2 1 1 3 3 3 0 Guanine nucleotide exchange factor in Golgi transport N-terminal Cnd3 PF12719.7 RKO90070.1 - 0.019 14.2 0.1 0.03 13.5 0.1 1.2 1 0 0 1 1 1 0 Nuclear condensing complex subunits, C-term domain GGN PF15685.5 RKO90070.1 - 0.087 11.9 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 Gametogenetin Clusterin PF01093.17 RKO90070.1 - 0.13 11.3 0.0 0.16 11.0 0.0 1.1 1 0 0 1 1 1 0 Clusterin CBF PF03914.17 RKO90070.1 - 0.13 12.2 0.0 0.21 11.6 0.0 1.4 2 0 0 2 2 2 0 CBF/Mak21 family DUF3624 PF12292.8 RKO90071.1 - 0.16 12.4 0.4 0.4 11.1 0.4 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3624) DUF4246 PF14033.6 RKO90072.1 - 0.013 14.7 0.0 0.6 9.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4246) DUF4246 PF14033.6 RKO90073.1 - 0.0012 18.1 0.0 0.002 17.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF4246) Kelch_4 PF13418.6 RKO90075.1 - 2.4e-18 65.9 10.3 4.4e-07 29.8 0.1 5.3 5 0 0 5 5 5 4 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO90075.1 - 1.8e-16 59.7 7.0 2.1e-07 30.9 0.1 4.6 3 1 1 4 4 4 4 Kelch motif Kelch_1 PF01344.25 RKO90075.1 - 3.6e-16 58.5 0.4 1e-06 28.2 0.1 5.0 4 0 0 4 4 4 4 Kelch motif Kelch_3 PF13415.6 RKO90075.1 - 7.7e-16 58.0 15.1 5.9e-06 26.4 0.1 6.3 6 1 0 6 6 6 3 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO90075.1 - 1.7e-14 53.4 1.0 0.00031 20.7 0.0 3.9 4 0 0 4 4 4 3 Kelch motif Kelch_2 PF07646.15 RKO90075.1 - 3.4e-07 30.0 4.5 0.047 13.7 0.9 4.5 5 1 0 5 5 5 2 Kelch motif YbjQ_1 PF01906.17 RKO90076.1 - 0.041 14.5 0.7 2.4 8.8 0.0 2.5 2 0 0 2 2 2 0 Putative heavy-metal-binding Mito_fiss_reg PF05308.11 RKO90076.1 - 1.4 9.0 8.2 3.2 7.8 8.2 1.6 1 0 0 1 1 1 0 Mitochondrial fission regulator DUF1363 PF07101.11 RKO90078.1 - 0.18 12.1 2.6 0.74 10.1 0.6 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF1363) Plasmodium_Vir PF05795.11 RKO90078.1 - 0.32 10.4 9.2 4.8 6.5 9.0 2.3 2 0 0 2 2 2 0 Plasmodium vivax Vir protein Peptidase_M22 PF00814.25 RKO90078.1 - 1.3 8.6 7.5 0.45 10.2 2.7 2.5 2 1 0 2 2 2 0 Glycoprotease family End3 PF12761.7 RKO90078.1 - 1.6 8.8 6.7 0.3 11.2 0.8 2.2 2 0 0 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 ATG16 PF08614.11 RKO90079.1 - 0.0016 18.7 8.3 0.0016 18.7 8.3 14.0 2 2 10 13 13 13 6 Autophagy protein 16 (ATG16) Sec5 PF15469.6 RKO90079.1 - 0.046 13.5 0.0 0.046 13.5 0.0 4.6 4 0 0 4 4 4 0 Exocyst complex component Sec5 bZIP_1 PF00170.21 RKO90079.1 - 0.37 10.9 0.0 0.07 13.2 0.9 10.1 9 2 0 10 10 10 0 bZIP transcription factor Tnp_22_trimer PF17489.2 RKO90079.1 - 0.63 10.1 2.9 11 6.1 0.3 3.4 2 0 0 2 2 2 0 L1 transposable element trimerization domain Efg1 PF10153.9 RKO90081.1 - 9.5e-25 87.2 3.0 8.2e-22 77.7 2.5 2.2 2 0 0 2 2 2 2 rRNA-processing protein Efg1 TSC22 PF01166.18 RKO90082.1 - 0.22 11.9 3.2 1.4 9.2 0.1 3.1 3 0 0 3 3 3 0 TSC-22/dip/bun family Cep57_CLD_2 PF14197.6 RKO90082.1 - 4.2 7.5 8.2 3.4 7.8 0.6 2.7 2 1 0 2 2 2 0 Centrosome localisation domain of PPC89 Velvet PF11754.8 RKO90083.1 - 4.4e-26 92.3 0.1 5e-26 92.2 0.1 1.0 1 0 0 1 1 1 1 Velvet factor FH2 PF02181.23 RKO90084.1 - 2.6e-09 36.7 0.0 3.4e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 Formin Homology 2 Domain GATA PF00320.27 RKO90086.1 - 5.7e-08 32.2 0.2 1.2e-07 31.2 0.2 1.5 1 0 0 1 1 1 1 GATA zinc finger XPA_C PF05181.12 RKO90087.1 - 7.6e-22 77.0 2.4 1.5e-21 76.0 2.4 1.6 1 0 0 1 1 1 1 XPA protein C-terminus XPA_N PF01286.18 RKO90087.1 - 0.00067 19.7 2.7 0.00067 19.7 2.7 1.8 2 0 0 2 2 2 1 XPA protein N-terminal Peptidase_M28 PF04389.17 RKO90088.1 - 1.9e-38 132.1 0.0 3.7e-38 131.2 0.0 1.5 1 1 0 1 1 1 1 Peptidase family M28 F-box-like PF12937.7 RKO90089.1 - 1e-08 34.9 4.3 2e-08 34.0 4.3 1.5 1 0 0 1 1 1 1 F-box-like LRR_6 PF13516.6 RKO90089.1 - 0.00018 21.3 0.9 0.18 12.0 0.0 3.5 3 0 0 3 3 3 2 Leucine Rich repeat LRR_4 PF12799.7 RKO90089.1 - 0.00054 20.3 0.0 0.034 14.6 0.0 2.9 3 0 0 3 3 3 1 Leucine Rich repeats (2 copies) F-box PF00646.33 RKO90089.1 - 0.0021 17.9 0.6 0.0052 16.6 0.6 1.7 1 0 0 1 1 1 1 F-box domain PH PF00169.29 RKO90090.1 - 2e-06 28.3 0.0 3.4e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 PH domain SR-25 PF10500.9 RKO90090.1 - 0.14 11.8 8.6 0.27 10.8 8.6 1.4 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein FAM75 PF14650.6 RKO90091.1 - 3.4 7.1 16.6 4 6.9 16.6 1.3 1 0 0 1 1 1 0 FAM75 family CRC_subunit PF08624.10 RKO90092.1 - 8e-38 129.9 0.0 1.4e-37 129.1 0.0 1.3 1 0 0 1 1 1 1 Chromatin remodelling complex Rsc7/Swp82 subunit PHD PF00628.29 RKO90092.1 - 8.8e-13 47.9 29.2 6.8e-09 35.5 10.9 3.3 2 1 1 3 3 3 2 PHD-finger Ocnus PF05005.15 RKO90092.1 - 0.13 12.4 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 Janus/Ocnus family (Ocnus) Methyltransf_16 PF10294.9 RKO90093.1 - 6.6e-09 35.7 0.0 6.6e-08 32.5 0.1 1.9 2 0 0 2 2 2 1 Lysine methyltransferase MTS PF05175.14 RKO90093.1 - 9.4e-05 22.0 0.1 0.00013 21.5 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 RKO90093.1 - 0.0079 15.6 0.2 0.01 15.2 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 RKO90093.1 - 0.013 16.2 0.1 0.025 15.3 0.1 1.4 1 0 0 1 1 1 0 Methyltransferase domain Pkinase PF00069.25 RKO90095.1 - 4.4e-40 137.7 0.0 5e-40 137.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO90095.1 - 2.1e-18 66.6 0.0 2.7e-18 66.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 RKO90095.1 - 0.0011 18.3 0.3 0.0025 17.2 0.1 1.6 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 RKO90095.1 - 0.0056 16.6 5.6 0.0088 16.0 5.6 1.3 1 1 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 RKO90095.1 - 0.064 12.0 0.0 0.092 11.5 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Exo_endo_phos PF03372.23 RKO90097.1 - 1.2e-06 28.2 0.5 2.7e-05 23.8 0.5 2.2 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Metallophos PF00149.28 RKO90100.1 - 1.2e-38 133.7 0.6 1.6e-38 133.3 0.6 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 RKO90100.1 - 0.0011 19.4 0.1 0.0023 18.3 0.1 1.6 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain Rrn6 PF10214.9 RKO90101.1 - 5.6 5.3 6.6 8.1 4.8 6.6 1.2 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor DUF3421 PF11901.8 RKO90102.1 - 3.9e-20 71.9 0.1 4.3e-15 55.7 0.0 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF3421) Pirin PF02678.16 RKO90103.1 - 1.2e-32 112.1 0.0 2.4e-32 111.1 0.0 1.5 1 0 0 1 1 1 1 Pirin Pirin_C PF05726.13 RKO90103.1 - 1.1e-31 109.2 0.0 2e-30 105.2 0.0 2.2 2 0 0 2 2 2 1 Pirin C-terminal cupin domain Cupin_2 PF07883.11 RKO90103.1 - 0.029 14.1 1.1 0.27 11.0 0.2 2.7 3 1 0 3 3 3 0 Cupin domain KOW PF00467.29 RKO90103.1 - 0.11 12.4 0.5 25 5.0 0.2 2.7 2 0 0 2 2 2 0 KOW motif HATPase_c PF02518.26 RKO90104.1 - 5.5e-23 81.6 0.0 1.2e-22 80.5 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 RKO90104.1 - 1.1e-17 64.2 0.0 2e-17 63.4 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c_3 PF13589.6 RKO90104.1 - 7e-05 22.7 0.0 0.00012 21.9 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Hydrolase_3 PF08282.12 RKO90105.1 - 4.3e-38 131.5 0.0 1.5e-25 90.4 0.0 2.5 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 RKO90105.1 - 6.2e-12 45.6 0.0 4.1e-06 26.5 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 RKO90105.1 - 0.00025 21.4 0.2 0.13 12.5 0.1 2.5 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 RKO90105.1 - 0.14 12.5 0.0 1.1 9.6 0.0 2.2 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase Ank_2 PF12796.7 RKO90107.1 - 2.1e-28 98.7 0.2 7.1e-10 39.3 0.0 3.4 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO90107.1 - 8.7e-25 86.5 12.8 5.7e-06 26.5 0.2 6.9 2 2 5 7 7 7 5 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO90107.1 - 3e-23 81.9 5.1 4.5e-08 33.5 0.0 5.6 3 1 2 6 6 6 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO90107.1 - 4.6e-15 54.2 0.8 1.1 10.1 0.0 7.7 6 2 2 8 8 8 4 Ankyrin repeat HA PF03457.14 RKO90107.1 - 0.0016 18.7 0.0 0.55 10.6 0.0 3.7 3 2 0 3 3 3 1 Helicase associated domain Rbsn PF11464.8 RKO90107.1 - 0.047 13.4 0.3 3.7 7.4 0.2 2.7 3 0 0 3 3 3 0 Rabenosyn Rab binding domain Ank PF00023.30 RKO90107.1 - 0.071 13.6 0.0 72 4.1 0.0 4.7 3 1 1 4 4 4 0 Ankyrin repeat zf-MYND PF01753.18 RKO90108.1 - 3.4e-05 23.9 1.6 7.1e-05 22.8 1.6 1.5 1 0 0 1 1 1 1 MYND finger TPR_2 PF07719.17 RKO90108.1 - 0.036 14.2 1.6 0.093 12.9 0.1 2.5 3 0 0 3 3 3 0 Tetratricopeptide repeat DNA_pol_phi PF04931.13 RKO90108.1 - 0.4 8.7 5.0 0.61 8.1 5.0 1.1 1 0 0 1 1 1 0 DNA polymerase phi Mito_carr PF00153.27 RKO90109.1 - 1.2e-68 227.0 0.1 4.9e-24 84.1 0.0 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein Asp PF00026.23 RKO90110.1 - 7.2e-106 354.2 0.0 8.3e-106 354.0 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO90110.1 - 1.1e-09 38.8 0.3 2.4e-07 31.2 0.2 2.4 1 1 1 2 2 2 2 Xylanase inhibitor N-terminal TAXi_C PF14541.6 RKO90110.1 - 0.00013 21.8 0.0 0.00057 19.7 0.0 2.0 3 0 0 3 3 3 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 RKO90110.1 - 0.0078 16.8 0.2 8.5 7.1 0.0 2.9 2 1 0 2 2 2 2 Aspartyl protease ArAE_2 PF10334.9 RKO90111.1 - 1.9e-07 31.2 0.0 2.4e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Aromatic acid exporter family member 2 PAT1 PF09770.9 RKO90117.1 - 0.87 7.8 12.1 1 7.6 12.1 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 TFIIA PF03153.13 RKO90117.1 - 0.93 9.4 21.7 1.3 8.9 21.7 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit PHM7_cyt PF14703.6 RKO90117.1 - 8 6.7 7.3 2.1e+02 2.1 0.0 2.1 2 0 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter TMEM154 PF15102.6 RKO90119.1 - 0.052 13.4 0.2 0.11 12.3 0.2 1.5 1 0 0 1 1 1 0 TMEM154 protein family DUF4448 PF14610.6 RKO90119.1 - 0.082 12.7 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) DUF3377 PF11857.8 RKO90119.1 - 0.11 12.4 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3377) ABC_tran PF00005.27 RKO90120.1 - 2.4e-27 96.1 0.0 3.4e-27 95.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC2_membrane PF01061.24 RKO90120.1 - 1.3e-11 44.3 7.8 2.5e-11 43.4 7.8 1.4 1 0 0 1 1 1 1 ABC-2 type transporter AAA_10 PF12846.7 RKO90120.1 - 2.7e-05 23.3 0.1 4.1e-05 22.7 0.1 1.2 1 0 0 1 1 1 1 AAA-like domain T2SSE PF00437.20 RKO90120.1 - 0.00044 19.4 0.0 0.00065 18.8 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein RsgA_GTPase PF03193.16 RKO90120.1 - 0.00084 19.3 0.1 0.0017 18.3 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 RKO90120.1 - 0.0011 19.4 0.0 0.0022 18.4 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 RKO90120.1 - 0.0021 17.8 0.1 0.0036 17.0 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 RKO90120.1 - 0.0041 16.7 0.2 0.0087 15.6 0.2 1.5 1 0 0 1 1 1 1 AAA domain TrwB_AAD_bind PF10412.9 RKO90120.1 - 0.0042 16.0 0.1 0.0063 15.5 0.1 1.1 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain AAA_29 PF13555.6 RKO90120.1 - 0.02 14.6 0.3 0.051 13.3 0.3 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC2_membrane_3 PF12698.7 RKO90120.1 - 0.028 13.6 5.8 0.045 12.9 5.8 1.3 1 0 0 1 1 1 0 ABC-2 family transporter protein SMC_N PF02463.19 RKO90120.1 - 0.03 13.8 0.4 0.9 8.9 0.4 2.2 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 RKO90120.1 - 0.035 14.4 0.1 0.083 13.2 0.1 1.7 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 RKO90120.1 - 0.046 13.8 0.0 0.098 12.7 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_23 PF13476.6 RKO90120.1 - 0.071 13.6 0.4 0.13 12.8 0.4 1.3 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 RKO90120.1 - 0.083 12.7 0.4 9.7 5.9 0.0 2.2 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_24 PF13479.6 RKO90120.1 - 0.12 12.1 0.0 0.25 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 RKO90120.1 - 0.13 12.4 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Helicase HerA, central domain RNA_helicase PF00910.22 RKO90120.1 - 0.2 12.1 0.0 0.55 10.6 0.0 1.7 2 0 0 2 2 1 0 RNA helicase Anoctamin PF04547.12 RKO90121.1 - 1e-101 341.0 11.5 1.2e-101 340.8 11.5 1.0 1 0 0 1 1 1 1 Calcium-activated chloride channel WI12 PF07107.11 RKO90121.1 - 0.11 12.6 0.1 0.32 11.1 0.1 1.7 1 0 0 1 1 1 0 Wound-induced protein WI12 TFCD_C PF12612.8 RKO90123.1 - 1.3e-47 162.0 0.0 2.1e-46 158.1 0.0 2.6 3 0 0 3 3 3 1 Tubulin folding cofactor D C terminal HEAT_2 PF13646.6 RKO90123.1 - 0.00028 21.2 8.8 2.3 8.7 0.5 5.5 5 1 1 6 6 6 3 HEAT repeats HEAT PF02985.22 RKO90123.1 - 0.94 9.9 0.0 0.94 9.9 0.0 8.6 10 0 0 10 10 10 0 HEAT repeat Nuc_sug_transp PF04142.15 RKO90124.1 - 2.9e-90 302.6 5.2 3.7e-90 302.3 5.2 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter PUNUT PF16913.5 RKO90124.1 - 5.6e-08 32.4 2.0 7.8e-08 31.9 2.0 1.3 1 0 0 1 1 1 1 Purine nucleobase transmembrane transport EamA PF00892.20 RKO90124.1 - 1.9e-06 28.1 0.5 1.9e-06 28.1 0.5 2.6 2 2 0 2 2 2 1 EamA-like transporter family UAA PF08449.11 RKO90124.1 - 0.00018 20.9 2.9 0.00026 20.3 2.4 1.5 1 1 0 1 1 1 1 UAA transporter family EmrE PF13536.6 RKO90124.1 - 0.00038 20.1 1.8 0.00054 19.6 1.8 1.3 1 0 0 1 1 1 1 Putative multidrug resistance efflux transporter TPT PF03151.16 RKO90124.1 - 0.0021 17.5 4.0 0.015 14.7 0.7 2.1 1 1 1 2 2 2 2 Triose-phosphate Transporter family ATG16 PF08614.11 RKO90125.1 - 0.0091 16.2 17.9 0.012 15.8 17.9 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) HAUS-augmin3 PF14932.6 RKO90125.1 - 0.0093 15.6 11.3 0.012 15.2 11.3 1.1 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 3 Exonuc_VII_L PF02601.15 RKO90125.1 - 0.021 14.4 4.6 0.026 14.1 4.6 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit HemX PF04375.14 RKO90125.1 - 0.031 13.6 10.3 0.041 13.2 10.3 1.2 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase TMF_TATA_bd PF12325.8 RKO90125.1 - 0.048 13.9 9.8 0.094 12.9 9.8 1.4 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Jnk-SapK_ap_N PF09744.9 RKO90125.1 - 0.12 12.5 11.4 0.21 11.8 11.4 1.4 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 DHR10 PF18595.1 RKO90125.1 - 0.17 11.9 15.6 0.2 11.7 14.7 1.6 1 1 0 1 1 1 0 Designed helical repeat protein 10 domain Atg14 PF10186.9 RKO90125.1 - 0.59 9.2 12.3 0.78 8.8 12.3 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF724 PF05266.14 RKO90125.1 - 1.5 8.6 7.4 2.2 8.0 7.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) KxDL PF10241.9 RKO90125.1 - 1.9 8.8 10.0 2.8 8.3 9.6 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein SlyX PF04102.12 RKO90125.1 - 6.7 7.4 15.2 9.9 6.9 9.1 2.5 1 1 1 2 2 2 0 SlyX ADIP PF11559.8 RKO90125.1 - 9.9 6.2 16.1 92 3.1 15.9 2.0 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF2970 PF11174.8 RKO90126.1 - 0.036 13.9 0.2 0.08 12.8 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2970) TMEM154 PF15102.6 RKO90126.1 - 0.12 12.2 0.0 0.87 9.5 0.0 2.1 2 0 0 2 2 2 0 TMEM154 protein family Cyclin PF08613.11 RKO90128.1 - 0.00037 20.9 0.0 0.00041 20.7 0.0 1.0 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 RKO90128.1 - 0.0013 18.5 0.0 0.0015 18.3 0.0 1.0 1 0 0 1 1 1 1 Cyclin, N-terminal domain PX PF00787.24 RKO90129.1 - 5.9e-06 26.3 0.0 8e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 PX domain Oxysterol_BP PF01237.18 RKO90132.1 - 1.5e-09 37.2 0.0 1.6e-09 37.1 0.0 1.0 1 0 0 1 1 1 1 Oxysterol-binding protein GST_C_2 PF13410.6 RKO90134.1 - 0.16 12.0 0.6 28 4.8 0.0 2.8 3 0 0 3 3 3 0 Glutathione S-transferase, C-terminal domain SH3_9 PF14604.6 RKO90135.1 - 7.5e-07 28.9 0.0 1.5e-06 28.0 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO90135.1 - 0.00063 19.3 0.0 0.0011 18.5 0.0 1.4 1 0 0 1 1 1 1 SH3 domain MGC-24 PF05283.11 RKO90135.1 - 0.012 16.1 1.3 0.012 16.1 1.3 2.9 3 1 0 3 3 3 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin SH3_2 PF07653.17 RKO90135.1 - 0.025 14.3 0.1 0.056 13.1 0.1 1.6 1 0 0 1 1 1 0 Variant SH3 domain Bactofilin PF04519.13 RKO90135.1 - 0.091 13.1 0.1 0.2 12.0 0.1 1.5 1 0 0 1 1 1 0 Polymer-forming cytoskeletal BatD PF13584.6 RKO90138.1 - 0.11 11.2 0.0 0.17 10.7 0.0 1.1 1 0 0 1 1 1 0 Oxygen tolerance Phos_pyr_kin PF08543.12 RKO90141.1 - 7.4e-84 281.0 0.0 9.1e-84 280.7 0.0 1.0 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 RKO90141.1 - 1.6e-06 27.7 0.2 0.0027 17.1 0.0 2.1 2 0 0 2 2 2 2 pfkB family carbohydrate kinase Carb_kinase PF01256.17 RKO90141.1 - 0.1 12.1 0.1 0.22 11.0 0.0 1.7 2 0 0 2 2 2 0 Carbohydrate kinase Cu-oxidase_2 PF07731.14 RKO90145.1 - 3.5e-24 85.1 0.2 4.3e-24 84.8 0.2 1.1 1 0 0 1 1 1 1 Multicopper oxidase Cu-oxidase PF00394.22 RKO90146.1 - 3.2e-28 98.9 0.0 6.1e-28 97.9 0.0 1.4 2 0 0 2 2 2 1 Multicopper oxidase Cu-oxidase_3 PF07732.15 RKO90146.1 - 4.4e-20 71.9 0.0 4.1e-16 59.1 0.0 2.1 2 0 0 2 2 2 2 Multicopper oxidase Cu-oxidase_2 PF07731.14 RKO90146.1 - 0.14 11.9 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 Multicopper oxidase Glyoxalase PF00903.25 RKO90147.1 - 4.7e-19 68.8 0.0 5.7e-19 68.6 0.0 1.0 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 RKO90147.1 - 4e-05 23.8 0.0 0.00017 21.8 0.0 1.9 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_6 PF18029.1 RKO90147.1 - 0.00013 22.7 0.0 0.00026 21.7 0.0 1.5 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.7 RKO90147.1 - 0.12 12.3 0.0 0.53 10.2 0.0 1.9 2 1 0 2 2 2 0 Glyoxalase-like domain LRR_6 PF13516.6 RKO90148.1 - 0.0052 16.7 0.0 2.4 8.4 0.0 2.5 2 0 0 2 2 2 2 Leucine Rich repeat LRR_4 PF12799.7 RKO90148.1 - 0.016 15.7 0.1 0.044 14.2 0.0 1.8 2 0 0 2 2 2 0 Leucine Rich repeats (2 copies) F-box-like PF12937.7 RKO90149.1 - 4.1e-09 36.2 0.3 4.1e-09 36.2 0.3 2.6 2 0 0 2 2 2 1 F-box-like F-box PF00646.33 RKO90149.1 - 0.02 14.7 0.3 0.061 13.2 0.3 1.8 1 0 0 1 1 1 0 F-box domain Herpes_ori_bp PF02399.15 RKO90150.1 - 1.4e-10 39.9 0.0 1.4e-06 26.7 0.2 2.1 2 0 0 2 2 2 2 Origin of replication binding protein Kelch_4 PF13418.6 RKO90152.1 - 1.2e-18 66.8 6.4 8e-07 29.0 0.0 5.4 4 1 1 5 5 5 3 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO90152.1 - 3.4e-18 65.2 8.7 2e-06 27.9 0.0 5.5 5 1 1 6 6 6 4 Kelch motif Kelch_5 PF13854.6 RKO90152.1 - 4.9e-13 48.7 4.3 0.014 15.4 0.0 6.1 6 0 0 6 6 6 3 Kelch motif Kelch_1 PF01344.25 RKO90152.1 - 4.9e-13 48.4 1.3 0.00021 20.8 0.0 5.3 5 0 0 5 5 5 3 Kelch motif Kelch_2 PF07646.15 RKO90152.1 - 8.9e-10 38.2 3.5 0.11 12.5 0.0 5.7 6 0 0 6 6 6 2 Kelch motif Kelch_3 PF13415.6 RKO90152.1 - 1.2e-09 38.2 26.3 2.4e-06 27.7 0.0 6.7 7 1 0 7 7 7 3 Galactose oxidase, central domain SH3_1 PF00018.28 RKO90152.1 - 0.012 15.3 0.0 0.021 14.4 0.0 1.4 1 0 0 1 1 1 0 SH3 domain SH3_9 PF14604.6 RKO90152.1 - 0.013 15.4 0.1 0.023 14.5 0.1 1.4 1 0 0 1 1 1 0 Variant SH3 domain LRR19-TM PF15176.6 RKO90153.1 - 1.1 9.3 4.2 3.6 7.7 0.1 2.6 2 0 0 2 2 2 0 Leucine-rich repeat family 19 TM domain TPR_2 PF07719.17 RKO90154.1 - 6.1e-09 35.3 13.3 0.046 13.8 0.0 6.1 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_1 PF00515.28 RKO90154.1 - 8.9e-08 31.6 4.1 0.023 14.5 0.0 4.2 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 RKO90154.1 - 4.1e-06 26.6 0.1 0.47 10.8 0.1 4.3 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.6 RKO90154.1 - 3.7e-05 23.9 13.3 0.085 13.2 0.3 5.5 5 1 0 5 5 5 2 Tetratricopeptide repeat TPR_7 PF13176.6 RKO90154.1 - 6e-05 22.8 2.8 6.7 7.0 0.1 5.5 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_10 PF13374.6 RKO90154.1 - 0.0004 20.2 2.1 0.18 11.7 0.1 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO90154.1 - 0.0037 17.7 13.2 0.31 11.6 0.1 5.4 6 1 1 7 7 7 3 Tetratricopeptide repeat TPR_14 PF13428.6 RKO90154.1 - 0.016 16.0 20.8 12 7.0 0.1 7.2 6 1 1 7 7 7 0 Tetratricopeptide repeat Med12-LCEWAV PF12145.8 RKO90154.1 - 0.19 10.5 0.0 0.35 9.7 0.0 1.3 1 0 0 1 1 1 0 Eukaryotic Mediator 12 subunit domain TPR_4 PF07721.14 RKO90154.1 - 0.24 12.1 0.1 0.24 12.1 0.1 6.0 7 0 0 7 7 5 0 Tetratricopeptide repeat TPR_9 PF13371.6 RKO90154.1 - 0.41 10.8 0.0 0.41 10.8 0.0 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO90154.1 - 0.65 10.7 30.0 0.23 12.1 0.4 6.6 7 0 0 7 7 7 0 Tetratricopeptide repeat VASt PF16016.5 RKO90156.1 - 1.8e-33 116.1 0.2 5.4e-33 114.6 0.2 1.9 1 0 0 1 1 1 1 VAD1 Analog of StAR-related lipid transfer domain GRAM PF02893.20 RKO90156.1 - 1.2e-12 47.8 0.4 2.6e-12 46.6 0.4 1.5 1 0 0 1 1 1 1 GRAM domain PH PF00169.29 RKO90156.1 - 4.2e-09 36.9 0.2 9.8e-08 32.5 0.2 2.5 1 1 0 1 1 1 1 PH domain BAR_3 PF16746.5 RKO90156.1 - 1.2e-07 31.7 1.1 2.4e-07 30.7 0.2 1.8 2 0 0 2 2 2 1 BAR domain of APPL family Pkinase PF00069.25 RKO90159.1 - 1.2e-42 146.2 0.0 8.2e-30 104.0 0.0 2.1 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 RKO90159.1 - 9e-18 64.5 0.0 4.6e-17 62.2 0.0 2.1 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO90159.1 - 8.1e-06 25.4 0.0 2.3e-05 23.9 0.0 1.6 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 RKO90159.1 - 0.00042 19.7 0.0 0.00073 19.0 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 RKO90160.1 - 4.6e-40 137.6 0.0 2.5e-25 89.4 0.0 2.1 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 RKO90160.1 - 1.1e-17 64.2 0.0 4.8e-15 55.5 0.0 2.8 2 1 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 RKO90160.1 - 1.5e-05 24.5 0.0 8.9e-05 21.9 0.0 1.9 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 RKO90160.1 - 1.6e-05 24.9 0.8 4.2e-05 23.6 0.8 1.6 1 1 0 1 1 1 1 Phosphotransferase enzyme family Kdo PF06293.14 RKO90160.1 - 0.00051 19.5 0.0 0.00084 18.7 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 RKO90160.1 - 0.094 11.5 0.0 0.12 11.1 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase CAP_N PF01213.19 RKO90160.1 - 0.93 8.9 2.2 1.4 8.4 2.2 1.2 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal 3-HAO PF06052.12 RKO90161.1 - 9.4e-59 197.4 0.0 1.1e-58 197.1 0.0 1.0 1 0 0 1 1 1 1 3-hydroxyanthranilic acid dioxygenase Cupin_2 PF07883.11 RKO90161.1 - 0.0007 19.3 0.0 0.001 18.7 0.0 1.2 1 0 0 1 1 1 1 Cupin domain DZR PF12773.7 RKO90161.1 - 0.0092 16.0 1.4 0.016 15.2 1.4 1.4 1 0 0 1 1 1 1 Double zinc ribbon Nudix_N_2 PF14803.6 RKO90161.1 - 0.11 12.5 5.0 0.43 10.5 0.2 2.5 2 1 0 2 2 2 0 Nudix N-terminal Zn-ribbon_8 PF09723.10 RKO90161.1 - 0.45 10.7 3.8 2 8.6 3.8 2.0 1 1 0 1 1 1 0 Zinc ribbon domain RPA PF10134.9 RKO90162.1 - 2.1e-87 292.4 0.0 2.5e-87 292.2 0.0 1.1 1 0 0 1 1 1 1 Replication initiator protein A HTH_17 PF12728.7 RKO90162.1 - 6e-09 36.0 0.0 1.7e-08 34.5 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_8 PF02954.19 RKO90162.1 - 0.0041 16.9 0.1 0.0099 15.6 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_23 PF13384.6 RKO90162.1 - 0.015 15.1 0.9 0.031 14.1 0.1 2.0 2 0 0 2 2 2 0 Homeodomain-like domain MerR_1 PF13411.6 RKO90162.1 - 0.093 12.8 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 MerR HTH family regulatory protein DUF2285 PF10074.9 RKO90163.1 - 3.3e-24 85.6 0.7 9e-24 84.2 0.7 1.8 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2285) ASXH PF13919.6 RKO90163.1 - 0.2 11.7 0.0 0.92 9.5 0.0 1.9 2 0 0 2 2 2 0 Asx homology domain Toprim_3 PF13362.6 RKO90164.1 - 1.6e-21 76.4 0.3 3.2e-21 75.5 0.3 1.5 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 RKO90164.1 - 0.0032 17.8 0.0 0.0068 16.8 0.0 1.5 1 0 0 1 1 1 1 Toprim-like HemY_N PF07219.13 RKO90167.1 - 0.016 15.4 0.5 0.016 15.4 0.5 2.2 2 0 0 2 2 2 0 HemY protein N-terminus BAR PF03114.18 RKO90168.1 - 8.6e-34 117.2 1.5 1e-33 117.0 1.5 1.1 1 0 0 1 1 1 1 BAR domain SH3_1 PF00018.28 RKO90168.1 - 2.2e-14 52.8 0.0 3.7e-14 52.0 0.0 1.4 1 0 0 1 1 1 1 SH3 domain SH3_9 PF14604.6 RKO90168.1 - 1.3e-10 41.0 0.1 2.1e-10 40.3 0.1 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_2 PF07653.17 RKO90168.1 - 1.4e-09 37.4 0.0 2.4e-09 36.7 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain ATG16 PF08614.11 RKO90168.1 - 0.062 13.5 2.4 0.067 13.4 0.1 2.0 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) Laminin_I PF06008.14 RKO90168.1 - 0.27 10.9 4.6 4.9 6.8 0.2 2.1 2 0 0 2 2 2 0 Laminin Domain I CLZ PF16526.5 RKO90168.1 - 1.1 9.7 4.9 5.8 7.4 0.0 2.6 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels SET PF00856.28 RKO90169.1 - 7.8e-19 68.7 0.1 8.7e-18 65.3 0.1 2.1 1 1 0 1 1 1 1 SET domain AWS PF17907.1 RKO90169.1 - 1.9e-10 40.6 7.7 1.9e-10 40.6 7.7 2.5 3 0 0 3 3 3 1 AWS domain Me-amine-dh_H PF06433.11 RKO90169.1 - 0.23 10.3 0.3 0.34 9.7 0.3 1.2 1 0 0 1 1 1 0 Methylamine dehydrogenase heavy chain (MADH) TrbC PF04956.13 RKO90170.1 - 0.067 13.4 0.1 0.088 13.0 0.1 1.2 1 0 0 1 1 1 0 TrbC/VIRB2 family ABC_tran PF00005.27 RKO90171.1 - 1e-07 32.6 0.0 1.2e-07 32.3 0.0 1.1 1 0 0 1 1 1 1 ABC transporter PINIT PF14324.6 RKO90173.1 - 4e-13 49.9 0.0 2.2e-12 47.5 0.0 2.2 2 1 0 2 2 2 1 PINIT domain SAP PF02037.27 RKO90173.1 - 2.4e-08 33.5 0.4 7e-08 32.1 0.0 2.0 3 0 0 3 3 3 1 SAP domain Erf4 PF10256.9 RKO90174.1 - 1.4e-05 25.2 0.0 4.4e-05 23.5 0.0 1.8 2 0 0 2 2 2 1 Golgin subfamily A member 7/ERF4 family AAA_11 PF13086.6 RKO90174.1 - 0.074 12.8 5.7 0.11 12.3 5.7 1.2 1 0 0 1 1 1 0 AAA domain Cytochrom_NNT PF03264.14 RKO90174.1 - 0.36 10.5 3.2 0.74 9.5 3.2 1.4 1 0 0 1 1 1 0 NapC/NirT cytochrome c family, N-terminal region pRN1_helical PF13010.6 RKO90174.1 - 0.45 10.5 5.0 16 5.4 5.3 2.4 2 0 0 2 2 2 0 Primase helical domain DUF2796 PF10986.8 RKO90174.1 - 1.3 9.0 6.3 2.2 8.2 6.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2796) DLH PF01738.18 RKO90176.1 - 0.0033 17.0 0.0 0.6 9.6 0.0 2.1 2 0 0 2 2 2 2 Dienelactone hydrolase family LIM PF00412.22 RKO90179.1 - 4.7e-10 39.5 1.1 6.8e-10 39.0 1.1 1.2 1 0 0 1 1 1 1 LIM domain YwqJ-deaminase PF14431.6 RKO90179.1 - 0.035 14.3 0.1 0.049 13.8 0.1 1.3 1 0 0 1 1 1 0 YwqJ-like deaminase SUZ PF12752.7 RKO90179.1 - 0.89 10.4 3.1 0.55 11.0 0.4 1.9 1 1 1 2 2 2 0 SUZ domain Pkinase PF00069.25 RKO90181.1 - 9.7e-62 208.7 0.0 1.1e-61 208.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO90181.1 - 9.3e-33 113.6 0.0 1.1e-32 113.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO90181.1 - 1.1e-07 31.5 0.0 1.4e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 RKO90181.1 - 2.4e-05 23.5 0.1 3.1e-05 23.1 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 RKO90181.1 - 6.9e-05 22.3 0.0 9.8e-05 21.8 0.0 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 RKO90181.1 - 0.00069 19.6 0.0 0.0036 17.3 0.0 1.9 1 1 1 2 2 2 1 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 RKO90181.1 - 0.01 14.9 0.0 0.015 14.4 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 RIO1 PF01163.22 RKO90181.1 - 0.032 13.8 0.2 0.05 13.2 0.2 1.3 1 0 0 1 1 1 0 RIO1 family Choline_kinase PF01633.20 RKO90181.1 - 0.084 12.4 0.2 0.13 11.9 0.2 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase EcKinase PF02958.20 RKO90181.1 - 0.092 12.0 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Ecdysteroid kinase Methyltransf_19 PF04672.12 RKO90181.1 - 0.16 11.4 0.0 0.25 10.8 0.0 1.2 1 0 0 1 1 1 0 S-adenosyl methyltransferase His_Phos_2 PF00328.22 RKO90183.1 - 1.2e-75 255.3 0.0 1.4e-37 129.9 0.0 2.1 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 2) PPIP5K2_N PF18086.1 RKO90183.1 - 4e-40 135.8 0.2 1.1e-39 134.5 0.0 1.9 2 0 0 2 2 2 1 Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain RimK PF08443.11 RKO90183.1 - 6.8e-08 32.3 0.0 1.4e-07 31.3 0.0 1.4 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_3 PF02655.14 RKO90183.1 - 0.043 13.8 0.1 0.15 12.1 0.0 1.8 2 0 0 2 2 2 0 ATP-grasp domain Barwin PF00967.17 RKO90184.1 - 5.5e-06 26.2 0.6 9.3e-06 25.5 0.1 1.6 2 0 0 2 2 2 1 Barwin family DPBB_1 PF03330.18 RKO90184.1 - 6.3e-05 23.2 0.7 0.00016 21.9 0.7 1.8 1 1 0 1 1 1 1 Lytic transglycolase Cerato-platanin PF07249.12 RKO90184.1 - 0.0085 16.2 0.1 0.016 15.3 0.1 1.4 1 0 0 1 1 1 1 Cerato-platanin DUF3597 PF12200.8 RKO90185.1 - 0.14 12.7 0.5 0.28 11.7 0.5 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3597) Pinin_SDK_memA PF04696.13 RKO90185.1 - 0.33 11.0 11.0 0.63 10.1 11.0 1.3 1 0 0 1 1 1 0 pinin/SDK/memA/ protein conserved region Phage_Gp23 PF10669.9 RKO90185.1 - 0.52 10.7 7.2 0.87 9.9 7.2 1.3 1 0 0 1 1 1 0 Protein gp23 (Bacteriophage A118) NAM-associated PF14303.6 RKO90185.1 - 2.5 8.8 15.0 1.4e+02 3.1 15.0 2.4 1 1 0 1 1 1 0 No apical meristem-associated C-terminal domain WD40 PF00400.32 RKO90186.1 - 1.8e-25 88.7 12.9 0.002 18.9 0.0 9.0 9 0 0 9 9 9 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO90186.1 - 2.3e-12 47.1 0.4 0.1 12.9 0.0 5.1 4 2 0 4 4 4 4 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 RKO90186.1 - 1.5e-10 40.9 0.4 1.2e-05 24.8 0.0 2.9 3 0 0 3 3 3 2 WD40-like domain PQQ_3 PF13570.6 RKO90186.1 - 0.0028 18.1 0.6 2.7 8.6 0.0 4.4 5 0 0 5 5 5 1 PQQ-like domain Itfg2 PF15907.5 RKO90186.1 - 0.091 11.8 0.0 0.59 9.1 0.0 2.3 1 1 1 2 2 2 0 Integrin-alpha FG-GAP repeat-containing protein 2 DUF5072 PF16807.5 RKO90186.1 - 0.16 12.0 0.0 0.32 11.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5072) DUF5089 PF17002.5 RKO90187.1 - 1.2e-06 28.5 15.4 3.8e-06 26.9 15.4 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF5089) V-SNARE_C PF12352.8 RKO90187.1 - 0.00021 21.5 9.6 0.0035 17.6 1.3 2.5 2 0 0 2 2 2 2 Snare region anchored in the vesicle membrane C-terminus NPV_P10 PF05531.12 RKO90187.1 - 0.27 11.7 6.3 4.1 7.9 0.3 3.0 2 2 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Sec20 PF03908.13 RKO90187.1 - 0.52 10.3 6.8 0.094 12.6 2.4 2.0 2 0 0 2 2 2 0 Sec20 LPP PF04728.13 RKO90187.1 - 0.53 10.7 0.1 0.53 10.7 0.1 3.6 4 1 1 5 5 5 0 Lipoprotein leucine-zipper Laminin_II PF06009.12 RKO90187.1 - 1.1 9.3 10.0 1.3 9.0 2.6 2.4 2 0 0 2 2 2 0 Laminin Domain II XhlA PF10779.9 RKO90187.1 - 3.8 7.8 10.1 30 4.9 2.0 3.7 2 2 2 4 4 4 0 Haemolysin XhlA TMPIT PF07851.13 RKO90187.1 - 9.5 5.4 7.2 2.8 7.1 2.7 1.9 2 0 0 2 2 2 0 TMPIT-like protein PUF PF00806.19 RKO90189.1 - 3.3e-22 76.9 3.7 9.7e-09 34.5 0.2 3.4 3 0 0 3 3 3 3 Pumilio-family RNA binding repeat Pan3_PK PF18101.1 RKO90190.1 - 2.4e-43 147.4 0.0 3.8e-43 146.8 0.0 1.3 1 0 0 1 1 1 1 Pan3 Pseudokinase domain Pkinase PF00069.25 RKO90190.1 - 0.00021 20.8 0.0 0.00039 19.9 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase PF00069.25 RKO90191.1 - 7.1e-41 140.3 0.0 1.9e-40 138.9 0.0 1.7 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO90191.1 - 5.9e-15 55.3 0.0 8.2e-12 44.9 0.0 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase APH PF01636.23 RKO90191.1 - 3.3e-06 27.2 0.0 0.04 13.8 0.0 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kinase-like PF14531.6 RKO90191.1 - 0.0023 17.3 0.0 0.16 11.3 0.0 2.2 2 0 0 2 2 2 2 Kinase-like Kdo PF06293.14 RKO90191.1 - 0.14 11.5 0.0 0.3 10.4 0.0 1.5 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family MttA_Hcf106 PF02416.16 RKO90191.1 - 0.15 11.5 0.0 0.31 10.4 0.0 1.5 1 0 0 1 1 1 0 mttA/Hcf106 family Kelch_4 PF13418.6 RKO90195.1 - 5.2e-18 64.8 12.9 6.8e-09 35.6 0.1 5.5 6 0 0 6 6 6 3 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO90195.1 - 9.1e-08 31.6 6.4 0.053 13.1 0.0 5.1 5 0 0 5 5 5 2 Kelch motif Kelch_5 PF13854.6 RKO90195.1 - 3.1e-07 30.2 11.8 0.0013 18.6 0.0 5.7 5 1 1 6 6 6 2 Kelch motif Kelch_6 PF13964.6 RKO90195.1 - 5.8e-06 26.4 8.0 0.19 12.1 0.0 5.5 6 0 0 6 6 6 3 Kelch motif Kelch_2 PF07646.15 RKO90195.1 - 0.00018 21.3 6.3 7.2 6.8 0.0 4.8 5 0 0 5 5 5 3 Kelch motif SH3_1 PF00018.28 RKO90195.1 - 0.014 15.0 0.0 0.028 14.0 0.0 1.5 1 0 0 1 1 1 0 SH3 domain SH3_9 PF14604.6 RKO90195.1 - 0.16 11.8 0.0 0.37 10.7 0.0 1.6 1 0 0 1 1 1 0 Variant SH3 domain Gly_rich_SFCGS PF14272.6 RKO90196.1 - 0.14 12.2 0.1 0.2 11.7 0.1 1.2 1 0 0 1 1 1 0 Glycine-rich SFCGS Drf_FH3 PF06367.16 RKO90198.1 - 3.8e-16 59.3 0.0 6.5e-16 58.5 0.0 1.4 1 0 0 1 1 1 1 Diaphanous FH3 Domain Drf_GBD PF06371.13 RKO90198.1 - 3.1e-07 30.1 1.3 6.2e-05 22.6 0.0 3.8 3 1 0 3 3 3 1 Diaphanous GTPase-binding Domain PDDEXK_3 PF13366.6 RKO90200.1 - 8.7e-10 39.0 0.0 4.1e-05 23.9 0.0 2.4 2 0 0 2 2 2 2 PD-(D/E)XK nuclease superfamily RTX_C PF08339.10 RKO90201.1 - 0.028 14.5 0.1 0.055 13.5 0.1 1.4 1 0 0 1 1 1 0 RTX C-terminal domain Pyr_redox_2 PF07992.14 RKO90203.1 - 3.9e-05 23.0 0.0 9.1e-05 21.8 0.0 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 RKO90203.1 - 0.00057 20.4 0.1 0.0013 19.2 0.1 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 RKO90203.1 - 0.0012 18.2 0.8 0.0031 16.8 0.2 1.8 2 0 0 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.24 RKO90203.1 - 0.0056 15.8 0.0 0.0089 15.2 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 RKO90203.1 - 0.0076 15.5 0.0 0.013 14.8 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 RKO90203.1 - 0.0088 14.8 0.0 0.032 12.9 0.0 1.9 3 0 0 3 3 3 1 HI0933-like protein NAD_binding_8 PF13450.6 RKO90203.1 - 0.045 14.0 0.0 0.11 12.7 0.0 1.7 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 RKO90203.1 - 0.11 11.7 0.1 0.22 10.8 0.1 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Peptidase_M2 PF01401.18 RKO90205.1 - 1.5e-50 172.5 0.0 1.7e-50 172.2 0.0 1.0 1 0 0 1 1 1 1 Angiotensin-converting enzyme DUF5011 PF16403.5 RKO90207.1 - 0.043 14.0 0.0 0.11 12.7 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5011) DUF3455 PF11937.8 RKO90208.1 - 2.8e-20 73.3 1.4 6.1e-20 72.2 0.4 2.1 2 1 0 2 2 2 1 Protein of unknown function (DUF3455) Reeler PF02014.16 RKO90208.1 - 1.5e-09 38.7 0.0 3e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 Reeler domain Glycoamylase PF10091.9 RKO90209.1 - 0.12 11.9 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 Putative glucoamylase CENP-C_C PF11699.8 RKO90212.1 - 7.2e-26 90.2 0.2 1e-25 89.7 0.2 1.2 1 0 0 1 1 1 1 Mif2/CENP-C like Cupin_2 PF07883.11 RKO90212.1 - 2.6e-07 30.2 0.0 4.9e-07 29.4 0.0 1.5 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 RKO90212.1 - 0.013 15.1 0.0 0.028 14.0 0.0 1.5 2 0 0 2 2 2 0 Cupin Cupin_3 PF05899.12 RKO90212.1 - 0.018 14.7 0.0 0.031 14.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF861) AraC_binding PF02311.19 RKO90212.1 - 0.044 13.7 0.0 0.075 12.9 0.0 1.3 1 0 0 1 1 1 0 AraC-like ligand binding domain Cupin_6 PF12852.7 RKO90212.1 - 0.063 13.0 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Cupin EutQ PF06249.12 RKO90212.1 - 0.11 12.3 0.1 3.9 7.2 0.0 2.8 2 1 0 2 2 2 0 Ethanolamine utilisation protein EutQ MannoseP_isomer PF01050.18 RKO90212.1 - 0.22 11.4 0.0 0.4 10.6 0.0 1.4 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase P5CR_dimer PF14748.6 RKO90213.1 - 2.3e-35 120.9 2.2 4.7e-35 119.9 2.2 1.5 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.17 RKO90213.1 - 2.3e-10 40.9 0.4 1.2e-09 38.6 0.1 2.4 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent TraH_2 PF06871.11 RKO90213.1 - 0.014 15.1 0.6 0.026 14.2 0.6 1.4 1 0 0 1 1 1 0 TraH_2 NAD_Gly3P_dh_N PF01210.23 RKO90213.1 - 0.085 12.8 0.0 0.31 11.0 0.0 1.9 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Ank_2 PF12796.7 RKO90214.1 - 0.0012 19.4 0.0 0.25 12.0 0.0 2.2 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO90214.1 - 0.01 16.1 0.1 3.8 7.9 0.0 2.7 2 1 1 3 3 3 0 Ankyrin repeats (many copies) VHL_C PF17211.3 RKO90214.1 - 0.063 13.3 0.3 12 6.0 0.0 2.4 2 0 0 2 2 2 0 VHL box domain Ank_3 PF13606.6 RKO90214.1 - 0.084 13.5 0.8 42 5.2 0.1 3.4 4 0 0 4 4 4 0 Ankyrin repeat Sec39 PF08314.11 RKO90215.1 - 7.3e-59 200.0 0.0 3e-42 145.1 0.0 2.2 2 0 0 2 2 2 2 Secretory pathway protein Sec39 Nbas_N PF15492.6 RKO90215.1 - 2.1e-18 66.7 0.4 3.4e-08 33.1 0.1 3.3 3 0 0 3 3 3 3 Neuroblastoma-amplified sequence, N terminal CRAL_TRIO PF00650.20 RKO90219.1 - 1.2e-27 96.6 0.0 1.4e-27 96.4 0.0 1.0 1 0 0 1 1 1 1 CRAL/TRIO domain STAS PF01740.21 RKO90219.1 - 0.079 12.6 0.0 0.14 11.8 0.0 1.5 1 1 0 1 1 1 0 STAS domain Proteasome PF00227.26 RKO90220.1 - 5e-50 169.6 0.0 6.5e-50 169.3 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit Pr_beta_C PF12465.8 RKO90220.1 - 6.7e-11 41.4 0.1 6.7e-11 41.4 0.1 1.8 2 0 0 2 2 2 1 Proteasome beta subunits C terminal AAA_16 PF13191.6 RKO90221.1 - 1.2e-19 71.3 0.0 7.5e-18 65.5 0.0 2.8 2 1 0 2 2 2 1 AAA ATPase domain OPT PF03169.15 RKO90222.1 - 5.6e-107 358.9 30.6 1.7e-86 291.2 22.1 2.5 2 1 0 2 2 2 2 OPT oligopeptide transporter protein Hc1 PF07432.13 RKO90223.1 - 0.056 13.8 7.5 0.06 13.7 2.5 2.1 2 0 0 2 2 2 0 Histone H1-like protein Hc1 Fmp27_WPPW PF10359.9 RKO90224.1 - 0.0096 14.8 1.4 0.015 14.2 1.4 1.2 1 0 0 1 1 1 1 RNA pol II promoter Fmp27 protein domain GRIN_C PF15235.6 RKO90224.1 - 6.1 7.1 6.9 74 3.6 6.9 2.4 1 1 0 1 1 1 0 G protein-regulated inducer of neurite outgrowth C-terminus VCBS PF13517.6 RKO90225.1 - 2.6e-26 92.0 14.4 8.5e-09 35.9 0.1 5.4 4 1 1 5 5 5 4 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella FG-GAP PF01839.23 RKO90225.1 - 1e-07 31.9 32.8 0.0024 18.0 0.1 6.8 7 0 0 7 7 7 5 FG-GAP repeat TcdB_toxin_midN PF12256.8 RKO90225.1 - 6.7e-06 25.6 2.1 0.36 10.2 0.0 5.2 4 1 2 6 6 6 2 Insecticide toxin TcdB middle/N-terminal region Ras PF00071.22 RKO90226.1 - 1e-64 217.1 1.4 1.2e-64 216.8 1.4 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO90226.1 - 9.8e-36 122.6 0.1 1.7e-35 121.8 0.1 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO90226.1 - 1.3e-16 60.5 0.2 1.6e-16 60.2 0.2 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 RKO90226.1 - 5.3e-06 26.4 1.3 0.047 13.6 0.4 2.2 1 1 1 2 2 2 2 RsgA GTPase Gtr1_RagA PF04670.12 RKO90226.1 - 2.1e-05 24.0 0.1 2.4e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 RKO90226.1 - 2.2e-05 24.0 0.1 3.4e-05 23.3 0.1 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 RKO90226.1 - 5.3e-05 23.3 0.8 7.2e-05 22.8 0.1 1.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 RKO90226.1 - 5.9e-05 22.7 0.9 0.00017 21.2 0.9 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 RKO90226.1 - 0.00099 18.7 0.2 0.0066 16.0 0.2 1.9 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA PF00004.29 RKO90226.1 - 0.0092 16.4 0.2 0.92 9.9 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 RKO90226.1 - 0.019 14.4 0.0 0.2 11.0 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein AAA_16 PF13191.6 RKO90226.1 - 0.019 15.4 0.0 0.023 15.1 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 RKO90226.1 - 0.044 14.0 0.0 0.067 13.5 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 RKO90226.1 - 0.045 13.5 0.4 0.16 11.8 0.0 2.1 2 0 0 2 2 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 RKO90226.1 - 0.048 13.6 0.0 0.091 12.8 0.0 1.6 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 RKO90226.1 - 0.057 12.9 0.1 0.18 11.3 0.0 1.8 2 0 0 2 2 2 0 P-loop containing dynein motor region Septin PF00735.18 RKO90226.1 - 0.061 12.6 0.1 0.17 11.1 0.0 1.7 2 1 0 2 2 2 0 Septin ABC_tran PF00005.27 RKO90226.1 - 0.13 12.8 0.1 0.18 12.3 0.1 1.5 1 1 0 1 1 1 0 ABC transporter CNOT11 PF10155.9 RKO90227.1 - 5.7e-52 175.1 5.3 8.5e-52 174.6 5.3 1.3 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 11 Creb_binding PF09030.10 RKO90227.1 - 0.001 19.7 0.2 0.0044 17.7 0.0 2.0 2 0 0 2 2 2 1 Creb binding PSD5 PF07637.11 RKO90227.1 - 0.083 13.2 0.2 0.42 11.0 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1595) Glyco_transf_64 PF09258.10 RKO90228.1 - 2.8e-53 180.7 0.0 6.6e-53 179.5 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase family 64 domain DLH PF01738.18 RKO90229.1 - 5e-21 75.3 0.1 6e-21 75.0 0.1 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_3 PF07859.13 RKO90229.1 - 0.034 14.0 1.0 0.086 12.7 0.4 1.8 1 1 1 2 2 2 0 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 RKO90229.1 - 0.036 13.3 0.0 0.057 12.7 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 BAAT_C PF08840.11 RKO90229.1 - 0.084 12.8 0.3 2.3 8.1 0.3 1.9 1 1 1 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal Sds3 PF08598.11 RKO90230.1 - 4.3e-11 43.2 0.0 6.2e-11 42.7 0.0 1.3 1 0 0 1 1 1 1 Sds3-like Nop14 PF04147.12 RKO90230.1 - 0.92 7.6 11.9 1.3 7.1 11.9 1.2 1 0 0 1 1 1 0 Nop14-like family Imm72 PF15584.6 RKO90231.1 - 0.15 12.3 0.3 1.2 9.3 0.0 2.3 2 0 0 2 2 2 0 Immunity protein 72 LRR_8 PF13855.6 RKO90232.1 - 0.06 13.1 0.0 1.8 8.4 0.0 2.5 2 0 0 2 2 2 0 Leucine rich repeat DEAD PF00270.29 RKO90233.1 - 2.7e-22 79.4 0.0 6.8e-22 78.1 0.0 1.7 1 1 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO90233.1 - 2.6e-09 37.4 0.0 1e-08 35.5 0.0 2.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain MFS_1 PF07690.16 RKO90234.1 - 2.5e-23 82.6 49.8 1.4e-21 76.8 32.7 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily UNC-93 PF05978.16 RKO90234.1 - 8.3e-14 51.6 11.0 2.9e-13 49.8 11.0 2.0 1 1 0 1 1 1 1 Ion channel regulatory protein UNC-93 OHCU_decarbox PF09349.10 RKO90235.1 - 2.5e-39 135.2 0.0 2.8e-39 135.1 0.0 1.0 1 0 0 1 1 1 1 OHCU decarboxylase DUF1615 PF07759.12 RKO90237.1 - 0.015 14.5 0.2 0.021 14.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1615) Aida_N PF08910.10 RKO90237.1 - 0.02 15.3 0.1 0.037 14.4 0.1 1.5 1 0 0 1 1 1 0 Aida N-terminus Pro_isomerase PF00160.21 RKO90239.1 - 1.1e-44 152.5 0.2 1.2e-44 152.4 0.2 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Rhomboid PF01694.22 RKO90240.1 - 2.7e-22 79.4 9.8 3.8e-22 78.9 9.8 1.2 1 0 0 1 1 1 1 Rhomboid family Tcf25 PF04910.14 RKO90241.1 - 1.8e-76 257.5 0.0 2.3e-76 257.2 0.0 1.0 1 0 0 1 1 1 1 Transcriptional repressor TCF25 IQ PF00612.27 RKO90243.1 - 0.003 17.2 6.7 0.0099 15.6 0.7 2.6 2 0 0 2 2 2 2 IQ calmodulin-binding motif peroxidase PF00141.23 RKO90244.1 - 2.7e-20 73.1 0.0 4e-20 72.5 0.0 1.2 1 0 0 1 1 1 1 Peroxidase cNMP_binding PF00027.29 RKO90249.1 - 5.3e-14 52.0 0.2 1.9e-13 50.3 0.0 1.8 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain DUF3323 PF11796.8 RKO90249.1 - 0.043 13.7 2.3 0.05 13.5 2.3 1.2 1 0 0 1 1 1 0 Protein of unknown function N-terminus (DUF3323) DUF1682 PF07946.14 RKO90249.1 - 0.16 11.1 4.6 0.17 11.1 4.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) DUF2870 PF11069.8 RKO90249.1 - 1.1 9.7 5.2 1.6 9.1 5.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2870) DUF1764 PF08576.10 RKO90250.1 - 0.19 12.6 7.9 4.9 8.1 0.9 2.4 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF1764) zf-C2H2_4 PF13894.6 RKO90251.1 - 1.9e-08 34.4 16.6 0.00081 20.0 1.8 3.4 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2 PF00096.26 RKO90251.1 - 2.8e-07 30.6 20.6 0.00081 19.7 3.9 3.0 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 RKO90251.1 - 3.5e-05 24.0 11.6 0.013 15.9 1.8 4.2 4 0 0 4 4 4 1 Zinc-finger double domain zf-C2HE PF16278.5 RKO90251.1 - 0.0025 18.2 0.5 1.7 9.2 0.1 2.4 2 0 0 2 2 2 2 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2_jaz PF12171.8 RKO90251.1 - 0.012 15.9 6.8 0.07 13.4 1.5 2.5 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-H2C2_5 PF13909.6 RKO90251.1 - 0.02 14.7 2.0 0.02 14.7 2.0 1.9 2 0 0 2 2 2 0 C2H2-type zinc-finger domain zf-met PF12874.7 RKO90251.1 - 0.039 14.4 8.9 0.3 11.5 2.2 2.5 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-BED PF02892.15 RKO90251.1 - 1.1 9.4 12.7 1.1 9.3 1.4 3.0 2 1 1 3 3 3 0 BED zinc finger FYVE PF01363.21 RKO90251.1 - 2.2 8.5 10.2 5 7.3 4.7 2.3 2 0 0 2 2 2 0 FYVE zinc finger zf-C2H2_6 PF13912.6 RKO90251.1 - 9 6.4 16.1 12 6.1 0.8 3.3 3 0 0 3 3 3 0 C2H2-type zinc finger DUF4246 PF14033.6 RKO90252.1 - 2.2e-06 27.1 0.0 3.1e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4246) DUF4246 PF14033.6 RKO90253.1 - 2.7e-14 53.2 0.0 3e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4246) SET PF00856.28 RKO90254.1 - 4.3e-06 27.2 0.0 4.9e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 SET domain HAP1_N PF04849.13 RKO90255.1 - 4.4e-05 22.8 0.4 4.4e-05 22.8 0.4 3.1 3 1 0 3 3 3 1 HAP1 N-terminal conserved region TMF_DNA_bd PF12329.8 RKO90255.1 - 0.015 15.3 0.4 0.015 15.3 0.4 4.4 3 2 1 4 4 4 0 TATA element modulatory factor 1 DNA binding DUF948 PF06103.11 RKO90255.1 - 0.054 13.7 7.1 2.9 8.2 0.0 4.0 4 1 1 5 5 5 0 Bacterial protein of unknown function (DUF948) Spc42p PF11544.8 RKO90255.1 - 0.068 13.2 3.1 0.79 9.8 1.3 2.8 2 0 0 2 2 2 0 Spindle pole body component Spc42p Halo_GVPC PF05465.13 RKO90255.1 - 0.22 11.8 4.7 0.9 9.9 0.2 3.5 3 0 0 3 3 3 0 Halobacterial gas vesicle protein C (GVPC) repeat Baculo_PEP_C PF04513.12 RKO90255.1 - 0.31 11.1 10.3 4.7 7.2 3.1 3.5 3 0 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus MAD PF05557.13 RKO90255.1 - 1.1 7.5 19.8 3.3 6.0 19.7 1.8 1 1 0 1 1 1 0 Mitotic checkpoint protein Spc7 PF08317.11 RKO90255.1 - 1.1 8.0 32.9 0.67 8.8 9.3 3.8 3 1 1 4 4 4 0 Spc7 kinetochore protein Tup_N PF08581.10 RKO90255.1 - 1.8 8.9 13.2 0.55 10.6 0.1 4.3 4 1 1 5 5 4 0 Tup N-terminal EF-hand_7 PF13499.6 RKO90257.1 - 1.8e-18 66.7 0.1 1.4e-07 31.8 0.4 3.3 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 RKO90257.1 - 7e-18 63.0 1.3 1.2e-06 27.9 0.1 4.5 5 0 0 5 5 5 4 EF-hand domain EF-hand_1 PF00036.32 RKO90257.1 - 7.1e-18 62.8 0.7 2.5e-06 26.6 0.1 4.3 4 0 0 4 4 4 4 EF hand EF-hand_5 PF13202.6 RKO90257.1 - 4.5e-15 54.4 0.9 0.0002 20.7 0.1 4.5 4 0 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 RKO90257.1 - 5.8e-11 42.1 1.5 0.00014 21.7 0.0 3.9 3 2 1 4 4 4 3 EF-hand domain pair EF-hand_9 PF14658.6 RKO90257.1 - 0.00034 20.9 0.0 0.12 12.7 0.0 3.4 4 0 0 4 4 4 1 EF-hand domain Tim17 PF02466.19 RKO90260.1 - 1.2e-15 57.8 5.0 1.7e-15 57.3 5.0 1.2 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family AAA_16 PF13191.6 RKO90261.1 - 1.1e-10 42.1 0.1 9.4e-10 39.1 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain WD40 PF00400.32 RKO90261.1 - 5.8e-10 39.6 13.4 1.4e-05 25.7 0.1 7.0 6 1 0 6 6 6 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO90261.1 - 2.7e-06 27.6 0.0 1.5 9.1 0.0 6.8 5 2 2 7 7 7 1 Anaphase-promoting complex subunit 4 WD40 domain AAA_22 PF13401.6 RKO90261.1 - 0.13 12.5 0.0 0.32 11.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain KRAB PF01352.27 RKO90261.1 - 0.19 11.4 0.0 0.43 10.3 0.0 1.5 1 0 0 1 1 1 0 KRAB box Ribosomal_60s PF00428.19 RKO90265.1 - 0.099 13.2 0.7 0.17 12.5 0.7 1.4 1 0 0 1 1 1 0 60s Acidic ribosomal protein RGS12_usC PF16612.5 RKO90268.1 - 0.17 12.3 2.9 0.48 10.9 1.6 2.5 2 0 0 2 2 2 0 C-terminal unstructured region of RGS12 Oscp1 PF10188.9 RKO90269.1 - 3.3e-11 43.6 0.1 4.1e-11 43.3 0.1 1.1 1 0 0 1 1 1 1 Organic solute transport protein 1 DUF3426 PF11906.8 RKO90269.1 - 0.078 13.1 0.2 0.1 12.7 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3426) DDE_Tnp_4 PF13359.6 RKO90270.1 - 1.1e-05 25.2 0.0 1.7e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 DDE superfamily endonuclease Exo_endo_phos_2 PF14529.6 RKO90272.1 - 0.057 13.3 0.0 0.086 12.7 0.0 1.2 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase ArAE_1 PF06081.11 RKO90272.1 - 0.15 12.2 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Aromatic acid exporter family member 1 DAO PF01266.24 RKO90274.1 - 0.0089 15.6 0.0 0.02 14.5 0.0 1.6 1 1 0 1 1 1 1 FAD dependent oxidoreductase DUF1631 PF07793.11 RKO90274.1 - 0.42 9.0 2.8 0.94 7.8 2.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1631) Ice_nucleation PF00818.17 RKO90274.1 - 7.3 6.9 14.8 3 8.1 8.9 2.8 2 0 0 2 2 2 0 Ice nucleation protein repeat Fe_dep_repr_C PF02742.15 RKO90275.1 - 0.13 12.4 0.0 0.33 11.0 0.0 1.6 1 0 0 1 1 1 0 Iron dependent repressor, metal binding and dimerisation domain ADK PF00406.22 RKO90276.1 - 1.4e-32 112.9 0.0 1.5e-32 112.8 0.0 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 RKO90276.1 - 2.9e-21 76.3 0.0 3.4e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 RKO90276.1 - 0.00013 22.5 0.0 0.00015 22.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 RKO90276.1 - 0.0026 17.5 0.2 0.48 10.1 0.1 2.1 1 1 1 2 2 2 2 Thymidylate kinase AAA_33 PF13671.6 RKO90276.1 - 0.059 13.5 0.0 0.072 13.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain IATP PF04568.12 RKO90277.1 - 2.1e-08 34.4 1.3 2.8e-06 27.7 0.4 2.2 2 0 0 2 2 2 2 Mitochondrial ATPase inhibitor, IATP DUF1476 PF07345.11 RKO90277.1 - 0.06 13.7 4.5 16 5.9 0.0 2.9 2 1 1 3 3 3 0 ATPase inhibitor subunit zeta SIR2 PF02146.17 RKO90278.1 - 8.2e-11 42.2 0.0 1e-10 41.8 0.0 1.1 1 0 0 1 1 1 1 Sir2 family RhoGEF PF00621.20 RKO90279.1 - 2.4e-25 89.8 0.0 1.1e-24 87.6 0.0 2.0 1 1 0 1 1 1 1 RhoGEF domain IQ PF00612.27 RKO90279.1 - 0.00036 20.1 3.5 0.0009 18.8 3.5 1.7 1 0 0 1 1 1 1 IQ calmodulin-binding motif Cwf_Cwc_15 PF04889.12 RKO90280.1 - 0.0047 16.7 9.0 0.0066 16.2 9.0 1.2 1 0 0 1 1 1 1 Cwf15/Cwc15 cell cycle control protein AAA_11 PF13086.6 RKO90280.1 - 0.14 12.0 4.7 0.2 11.4 4.7 1.2 1 0 0 1 1 1 0 AAA domain RNA_lig_T4_1 PF09511.10 RKO90281.1 - 6.6e-16 58.8 0.0 8.4e-16 58.5 0.0 1.1 1 0 0 1 1 1 1 RNA ligase Laminin_II PF06009.12 RKO90282.1 - 0.0052 16.8 0.1 0.0077 16.2 0.1 1.2 1 0 0 1 1 1 1 Laminin Domain II COG6 PF06419.11 RKO90282.1 - 0.009 14.3 0.1 0.011 14.0 0.1 1.1 1 0 0 1 1 1 1 Conserved oligomeric complex COG6 Fusion_gly PF00523.18 RKO90282.1 - 0.015 13.5 0.0 0.017 13.4 0.0 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0 NPV_P10 PF05531.12 RKO90282.1 - 0.017 15.6 0.5 0.025 15.0 0.1 1.4 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Baculo_PEP_C PF04513.12 RKO90282.1 - 0.028 14.5 1.2 0.032 14.3 1.2 1.2 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus DLP_helical PF18709.1 RKO90282.1 - 0.05 12.8 0.0 0.063 12.5 0.0 1.1 1 0 0 1 1 1 0 Dynamin-like helical domain MPS2 PF17060.5 RKO90282.1 - 0.055 12.7 0.1 0.061 12.6 0.1 1.0 1 0 0 1 1 1 0 Monopolar spindle protein 2 Rx_N PF18052.1 RKO90282.1 - 0.083 13.2 0.0 0.094 13.0 0.0 1.2 1 0 0 1 1 1 0 Rx N-terminal domain Spectrin PF00435.21 RKO90282.1 - 0.12 12.9 0.0 0.14 12.7 0.0 1.2 1 0 0 1 1 1 0 Spectrin repeat PspA_IM30 PF04012.12 RKO90282.1 - 0.14 11.7 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 PspA/IM30 family DASH_Duo1 PF08651.10 RKO90282.1 - 0.15 11.8 2.3 0.18 11.6 0.2 2.0 2 1 1 3 3 3 0 DASH complex subunit Duo1 Ras PF00071.22 RKO90284.1 - 3.9e-10 39.6 0.0 5.7e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 Ras family Ank_2 PF12796.7 RKO90284.1 - 1.5e-06 28.7 0.1 2e-06 28.3 0.1 1.2 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO90284.1 - 2.1e-06 27.9 0.6 3e-05 24.2 0.6 2.3 1 1 0 1 1 1 1 Ankyrin repeats (many copies) Roc PF08477.13 RKO90284.1 - 3.8e-05 23.9 0.0 6.6e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ank PF00023.30 RKO90284.1 - 0.00065 20.0 4.3 0.0055 17.1 2.5 2.8 2 1 1 3 3 3 1 Ankyrin repeat Ank_4 PF13637.6 RKO90284.1 - 0.0014 19.2 0.1 0.0044 17.6 0.1 1.8 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO90284.1 - 0.0092 16.4 0.0 0.41 11.4 0.1 3.0 3 0 0 3 3 3 1 Ankyrin repeat PAXIP1_C PF15364.6 RKO90285.1 - 0.022 15.0 3.1 0.033 14.5 3.1 1.2 1 0 0 1 1 1 0 PAXIP1-associated-protein-1 C term PTIP binding protein NADH_dehy_S2_C PF06444.11 RKO90286.1 - 0.12 12.9 0.1 0.25 11.9 0.1 1.5 1 0 0 1 1 1 0 NADH dehydrogenase subunit 2 C-terminus TSP_1 PF00090.19 RKO90287.1 - 0.0018 18.4 5.6 0.0037 17.5 5.6 1.5 1 0 0 1 1 1 1 Thrombospondin type 1 domain CFIA_Pcf11 PF11526.8 RKO90288.1 - 0.002 18.6 0.3 0.0041 17.6 0.3 1.5 1 0 0 1 1 1 1 Subunit of cleavage factor IA Pcf11 Mu-like_Com PF10122.9 RKO90288.1 - 0.041 13.3 0.2 0.66 9.5 0.0 2.4 2 0 0 2 2 2 0 Mu-like prophage protein Com Prok-RING_1 PF14446.6 RKO90288.1 - 0.041 13.8 1.4 16 5.5 0.0 3.1 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 Cytochrom_c3_2 PF14537.6 RKO90288.1 - 0.081 13.4 1.2 3.1 8.3 0.1 2.3 2 0 0 2 2 2 0 Cytochrome c3 Cytochrome_C7 PF14522.6 RKO90288.1 - 0.088 12.8 0.8 1.5 8.9 0.1 2.2 2 0 0 2 2 2 0 Cytochrome c7 and related cytochrome c zinc_ribbon_5 PF13719.6 RKO90288.1 - 0.094 12.5 1.0 0.56 10.0 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain LIM PF00412.22 RKO90288.1 - 0.47 10.7 2.0 29 5.0 0.2 3.0 2 1 0 2 2 2 0 LIM domain zf_UBZ PF18439.1 RKO90288.1 - 8 6.2 8.1 5.1 6.8 3.5 2.6 2 1 0 2 2 2 0 Ubiquitin-Binding Zinc Finger RNA_pol_Rpb4 PF03874.16 RKO90289.1 - 3.4e-08 33.9 0.1 5.7e-08 33.1 0.0 1.4 2 0 0 2 2 2 1 RNA polymerase Rpb4 zf-AN1 PF01428.16 RKO90290.1 - 4.2e-11 42.8 13.0 6.1e-11 42.3 10.0 2.1 2 0 0 2 2 2 1 AN1-like Zinc finger Transp_Tc5_C PF04236.15 RKO90290.1 - 5.8e-05 23.4 3.9 5.8e-05 23.4 3.9 1.6 2 0 0 2 2 2 1 Tc5 transposase C-terminal domain IBR PF01485.21 RKO90290.1 - 0.0043 17.2 7.5 0.013 15.7 7.5 1.8 1 1 0 1 1 1 1 IBR domain, a half RING-finger domain DUF2256 PF10013.9 RKO90290.1 - 0.12 12.5 3.5 0.21 11.7 0.4 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) Zn_Tnp_IS1 PF03811.13 RKO90290.1 - 0.54 10.0 10.1 1.5 8.6 1.0 2.7 3 1 0 3 3 3 0 InsA N-terminal domain GSH_synth_ATP PF03917.17 RKO90291.1 - 7.6e-30 103.9 0.0 1.2e-29 103.3 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain Gb3_synth PF04572.12 RKO90291.1 - 0.0016 18.6 0.0 0.0034 17.6 0.0 1.5 1 0 0 1 1 1 1 Alpha 1,4-glycosyltransferase conserved region Glycos_transf_2 PF00535.26 RKO90291.1 - 0.082 12.7 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 PHD PF00628.29 RKO90292.1 - 2.2e-06 27.4 9.5 2.8e-06 27.1 9.5 1.1 1 0 0 1 1 1 1 PHD-finger zf-HC5HC2H PF13771.6 RKO90292.1 - 0.0033 17.6 2.7 0.0046 17.2 2.8 1.3 1 1 0 1 1 1 1 PHD-like zinc-binding domain zf-HC5HC2H_2 PF13832.6 RKO90292.1 - 0.019 15.1 1.9 0.019 15.1 1.9 1.3 1 1 0 1 1 1 0 PHD-zinc-finger like domain UPF0172 PF03665.13 RKO90293.1 - 4.1e-42 144.4 0.0 5.7e-42 143.9 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0172) JAB PF01398.21 RKO90293.1 - 0.016 15.2 0.0 0.024 14.6 0.0 1.2 1 0 0 1 1 1 0 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Glycos_transf_3 PF00591.21 RKO90294.1 - 6.9e-61 206.0 2.4 9.1e-61 205.6 2.4 1.2 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 RKO90294.1 - 0.00061 19.6 0.3 0.001 18.8 0.3 1.4 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain Glyco_hydro_63N PF16923.5 RKO90296.1 - 5.5e-16 59.4 0.1 8.2e-16 58.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 63 N-terminal domain Tyrosinase PF00264.20 RKO90297.1 - 3e-11 44.0 16.9 1.3e-10 42.0 13.1 2.6 2 1 0 2 2 2 1 Common central domain of tyrosinase LRR_6 PF13516.6 RKO90298.1 - 0.071 13.2 1.0 6.6 7.1 0.0 3.4 3 0 0 3 3 3 0 Leucine Rich repeat RRM_1 PF00076.22 RKO90299.1 - 6.7e-08 32.2 0.0 1.4e-07 31.3 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TFIIA PF03153.13 RKO90299.1 - 7.8 6.4 40.0 0.017 15.1 16.2 3.7 2 2 1 3 3 3 0 Transcription factor IIA, alpha/beta subunit Ribosomal_L14e PF01929.17 RKO90300.1 - 6.4e-28 97.1 2.1 6.4e-28 97.1 2.1 1.5 2 0 0 2 2 2 1 Ribosomal protein L14 LSM PF01423.22 RKO90301.1 - 1.5e-13 50.2 0.0 1.5e-13 50.2 0.0 1.0 1 0 0 1 1 1 1 LSM domain IKI3 PF04762.12 RKO90302.1 - 2e-26 92.3 0.0 2.2e-26 92.2 0.0 1.0 1 0 0 1 1 1 1 IKI3 family ANAPC4_WD40 PF12894.7 RKO90302.1 - 0.00045 20.5 0.0 0.0037 17.5 0.0 2.1 1 1 1 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain Ras PF00071.22 RKO90303.1 - 3e-51 173.2 0.0 3.4e-51 173.1 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO90303.1 - 2.2e-17 63.4 0.0 3e-17 62.9 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO90303.1 - 3.8e-07 29.7 0.0 4.7e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 RKO90303.1 - 7.3e-05 22.7 0.0 0.014 15.3 0.0 2.2 2 0 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 RKO90303.1 - 9.6e-05 22.0 0.0 0.00016 21.3 0.0 1.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain CPP1-like PF11833.8 RKO90303.1 - 0.039 13.6 0.1 0.056 13.1 0.1 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like ATP_bind_1 PF03029.17 RKO90303.1 - 0.11 12.3 0.1 0.24 11.2 0.0 1.6 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein FeoB_N PF02421.18 RKO90303.1 - 0.22 11.1 0.0 0.54 9.8 0.0 1.6 2 0 0 2 2 2 0 Ferrous iron transport protein B CBM_10 PF02013.16 RKO90304.1 - 0.0026 18.2 11.2 1.3 9.6 0.3 3.7 3 1 0 3 3 3 2 Cellulose or protein binding domain Chorion_S16 PF05836.12 RKO90304.1 - 0.021 15.0 0.0 3.3 8.0 0.0 2.3 2 0 0 2 2 2 0 Chorion protein S16 Cu-oxidase PF00394.22 RKO90305.1 - 1.7e-27 96.5 0.0 3e-27 95.7 0.0 1.4 1 0 0 1 1 1 1 Multicopper oxidase Cu-oxidase_2 PF07731.14 RKO90305.1 - 6.9e-27 93.9 5.4 2e-23 82.7 2.1 3.6 3 1 0 3 3 3 2 Multicopper oxidase Cu-oxidase_3 PF07732.15 RKO90305.1 - 8.6e-19 67.7 0.6 6.1e-18 64.9 0.0 2.5 3 0 0 3 3 3 1 Multicopper oxidase AMP-binding_C PF13193.6 RKO90310.1 - 3.1e-07 31.3 0.0 4.9e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding_C PF13193.6 RKO90311.1 - 9.5e-08 32.9 0.2 1.7e-07 32.1 0.2 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Porin_2 PF02530.14 RKO90311.1 - 0.026 13.8 0.0 0.03 13.6 0.0 1.1 1 0 0 1 1 1 0 Porin subfamily MFS_MOT1 PF16983.5 RKO90312.1 - 5.8e-55 184.5 23.6 7.8e-32 110.0 7.0 2.6 2 0 0 2 2 2 2 Molybdate transporter of MFS superfamily Sulfate_transp PF00916.20 RKO90312.1 - 0.00053 18.8 4.5 0.00053 18.8 4.5 2.2 2 0 0 2 2 2 2 Sulfate permease family Carn_acyltransf PF00755.20 RKO90315.1 - 1.1e-36 126.7 0.0 1.2e-36 126.5 0.0 1.0 1 0 0 1 1 1 1 Choline/Carnitine o-acyltransferase Reovirus_M2 PF05993.12 RKO90316.1 - 0.13 10.3 0.0 0.19 9.8 0.0 1.1 1 0 0 1 1 1 0 Reovirus major virion structural protein Mu-1/Mu-1C (M2) Nucleoporin_FG PF13634.6 RKO90317.1 - 0.73 10.7 10.4 13 6.7 10.4 2.5 1 1 0 1 1 1 0 Nucleoporin FG repeat region Opiods_neuropep PF01160.18 RKO90317.1 - 0.92 9.7 6.5 12 6.1 0.7 2.5 2 0 0 2 2 2 0 Vertebrate endogenous opioids neuropeptide FeoB_associated PF12669.7 RKO90317.1 - 2.5 8.6 11.5 9.7 6.7 1.0 2.7 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein ABC2_membrane PF01061.24 RKO90319.1 - 4.1e-31 108.0 11.8 6.6e-31 107.4 11.2 1.6 1 1 1 2 2 2 1 ABC-2 type transporter ABC_tran PF00005.27 RKO90319.1 - 1.6e-26 93.4 0.0 2.6e-26 92.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 RKO90319.1 - 5e-05 23.3 0.3 0.00012 22.1 0.3 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 RKO90319.1 - 0.00078 19.9 0.1 0.0017 18.7 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_28 PF13521.6 RKO90319.1 - 0.0042 17.3 0.3 0.0098 16.1 0.3 1.6 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 RKO90319.1 - 0.0053 16.6 0.0 1.6 8.4 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 RKO90319.1 - 0.012 15.9 0.0 0.11 12.8 0.0 2.5 2 1 1 3 3 3 0 AAA domain MMR_HSR1 PF01926.23 RKO90319.1 - 0.014 15.4 0.0 0.035 14.2 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase T2SSE PF00437.20 RKO90319.1 - 0.023 13.8 0.2 0.039 13.0 0.2 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_29 PF13555.6 RKO90319.1 - 0.032 14.0 0.2 0.068 12.9 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.6 RKO90319.1 - 0.078 12.7 0.0 0.15 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 RKO90319.1 - 0.084 12.8 0.1 0.18 11.7 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_30 PF13604.6 RKO90319.1 - 0.11 12.3 0.3 0.22 11.2 0.3 1.4 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 RKO90319.1 - 0.15 12.1 0.2 0.29 11.1 0.2 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 RKO90319.1 - 0.17 12.0 0.0 0.39 10.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 RKO90319.1 - 0.19 12.1 0.0 0.39 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 RKO90319.1 - 0.21 11.9 0.7 0.53 10.6 0.3 1.8 2 0 0 2 2 1 0 AAA domain DUF2075 PF09848.9 RKO90319.1 - 0.22 10.7 0.0 0.36 10.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) gp12-short_mid PF09089.10 RKO90320.1 - 0.097 12.8 0.9 0.22 11.7 0.9 1.5 1 0 0 1 1 1 0 Phage short tail fibre protein gp12, middle domain Exonuc_VII_L PF02601.15 RKO90322.1 - 0.0002 21.0 12.9 0.00039 20.1 12.9 1.6 1 0 0 1 1 1 1 Exonuclease VII, large subunit TFIIA PF03153.13 RKO90322.1 - 0.13 12.2 71.6 3 7.7 64.8 3.2 2 1 1 3 3 3 0 Transcription factor IIA, alpha/beta subunit V_ATPase_I PF01496.19 RKO90322.1 - 0.3 9.0 13.5 0.44 8.4 13.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family TAF4 PF05236.14 RKO90322.1 - 0.34 10.6 20.7 0.85 9.3 20.7 1.6 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family CRT10 PF08728.10 RKO90322.1 - 0.97 7.5 5.6 1.3 7.1 5.6 1.1 1 0 0 1 1 1 0 CRT10 DUF572 PF04502.13 RKO90322.1 - 2.1 7.9 20.8 0.42 10.2 12.8 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF572) Band_3_cyto PF07565.13 RKO90322.1 - 5.2 6.8 16.4 12 5.6 16.4 1.6 1 0 0 1 1 1 0 Band 3 cytoplasmic domain Zip PF02535.22 RKO90322.1 - 6.9 5.8 8.9 12 5.0 8.9 1.4 1 0 0 1 1 1 0 ZIP Zinc transporter Lin-8 PF03353.15 RKO90322.1 - 9 5.8 25.1 24 4.3 22.6 2.4 2 0 0 2 2 2 0 Ras-mediated vulval-induction antagonist ABC_tran PF00005.27 RKO90325.1 - 1.2e-52 178.0 0.0 9.3e-30 103.9 0.0 2.7 2 1 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 RKO90325.1 - 1.1e-37 130.2 13.7 4.3e-30 105.3 8.3 2.2 2 0 0 2 2 2 2 ABC transporter transmembrane region SMC_N PF02463.19 RKO90325.1 - 1.5e-06 27.8 0.6 0.28 10.6 0.0 3.9 2 2 0 3 3 3 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 RKO90325.1 - 1.4e-05 25.1 0.2 0.011 15.6 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase T2SSE PF00437.20 RKO90325.1 - 4e-05 22.8 0.3 0.11 11.6 0.0 2.4 2 0 0 2 2 2 2 Type II/IV secretion system protein MMR_HSR1 PF01926.23 RKO90325.1 - 4.2e-05 23.6 1.6 0.33 11.1 0.0 3.0 3 0 0 3 3 3 2 50S ribosome-binding GTPase AAA_29 PF13555.6 RKO90325.1 - 7.6e-05 22.4 0.9 0.24 11.2 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_22 PF13401.6 RKO90325.1 - 8.3e-05 22.9 0.5 0.54 10.5 0.2 3.4 3 0 0 3 3 3 2 AAA domain AAA_21 PF13304.6 RKO90325.1 - 0.00012 22.0 1.4 4.2 7.1 0.0 4.0 4 0 0 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 RKO90325.1 - 0.00014 22.2 0.9 0.12 12.7 0.2 2.8 2 0 0 2 2 2 1 AAA ATPase domain DUF87 PF01935.17 RKO90325.1 - 0.00027 21.1 1.0 0.64 10.1 0.1 2.4 2 0 0 2 2 2 2 Helicase HerA, central domain AAA_23 PF13476.6 RKO90325.1 - 0.00051 20.6 1.2 0.57 10.6 0.1 2.3 2 0 0 2 2 2 2 AAA domain Zeta_toxin PF06414.12 RKO90325.1 - 0.0034 16.7 0.2 1.1 8.5 0.1 2.5 2 0 0 2 2 2 1 Zeta toxin Dynamin_N PF00350.23 RKO90325.1 - 0.021 14.9 0.8 0.31 11.1 0.1 2.4 2 0 0 2 2 2 0 Dynamin family AAA_7 PF12775.7 RKO90325.1 - 0.024 14.2 0.3 6.3 6.3 0.1 2.3 2 0 0 2 2 2 0 P-loop containing dynein motor region IstB_IS21 PF01695.17 RKO90325.1 - 0.029 14.1 0.4 4.2 7.1 0.0 2.8 3 0 0 3 3 3 0 IstB-like ATP binding protein SbcCD_C PF13558.6 RKO90325.1 - 0.06 13.6 0.2 8.7 6.7 0.0 3.0 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit RNA_helicase PF00910.22 RKO90325.1 - 0.061 13.7 0.1 5.3 7.5 0.1 2.7 2 0 0 2 2 2 0 RNA helicase MeaB PF03308.16 RKO90325.1 - 0.072 12.1 0.2 1.9 7.4 0.0 2.4 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Roc PF08477.13 RKO90325.1 - 0.074 13.3 0.5 14 5.9 0.1 2.6 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase TrwB_AAD_bind PF10412.9 RKO90325.1 - 0.078 11.9 0.4 9.5 5.0 0.1 2.6 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain FtsK_SpoIIIE PF01580.18 RKO90325.1 - 0.12 11.7 0.7 4.9 6.4 0.2 2.4 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_25 PF13481.6 RKO90325.1 - 0.12 11.9 0.9 13 5.3 0.0 3.0 3 0 0 3 3 3 0 AAA domain AAA_33 PF13671.6 RKO90325.1 - 0.16 12.1 0.2 24 5.1 0.1 3.2 3 0 0 3 3 2 0 AAA domain AAA_15 PF13175.6 RKO90325.1 - 0.21 11.2 0.1 20 4.7 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain DUF815 PF05673.13 RKO90325.1 - 0.24 10.5 0.3 1.6 7.9 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF815) NB-ARC PF00931.22 RKO90325.1 - 0.27 10.4 0.7 2.7 7.1 0.0 2.2 2 0 0 2 2 2 0 NB-ARC domain Hist_rich_Ca-bd PF10529.9 RKO90326.1 - 0.1 12.9 1.4 0.26 11.5 1.4 1.7 1 0 0 1 1 1 0 Histidine-rich Calcium-binding repeat region Mago_nashi PF02792.14 RKO90327.1 - 9.7e-37 126.2 0.0 1.1e-36 126.0 0.0 1.0 1 0 0 1 1 1 1 Mago nashi protein CARD PF00619.21 RKO90327.1 - 0.032 14.2 0.0 0.037 14.0 0.0 1.1 1 0 0 1 1 1 0 Caspase recruitment domain DNA_methylase PF00145.17 RKO90328.1 - 1.8e-08 34.2 0.0 3.7e-06 26.5 0.0 2.1 2 0 0 2 2 2 2 C-5 cytosine-specific DNA methylase PHD PF00628.29 RKO90328.1 - 2.9e-06 27.1 4.6 2.9e-06 27.1 4.6 2.4 2 0 0 2 2 2 1 PHD-finger zf-PHD-like PF15446.6 RKO90328.1 - 0.043 13.4 2.5 0.1 12.2 2.5 1.6 1 0 0 1 1 1 0 PHD/FYVE-zinc-finger like domain zf-HC5HC2H_2 PF13832.6 RKO90328.1 - 0.1 12.8 5.8 0.033 14.3 1.7 2.0 2 0 0 2 2 2 0 PHD-zinc-finger like domain Ald_Xan_dh_C2 PF02738.18 RKO90329.1 - 1.5e-43 149.1 0.0 1.7e-43 148.9 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase FAF PF11250.8 RKO90330.1 - 0.06 13.6 0.1 0.48 10.7 0.0 2.5 2 0 0 2 2 2 0 Fantastic Four meristem regulator Ribonuc_red_sm PF00268.21 RKO90331.1 - 1.5e-119 398.6 0.1 1.8e-119 398.3 0.1 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain ArfGap PF01412.18 RKO90336.1 - 1.1e-38 131.8 0.2 1.3e-38 131.6 0.2 1.1 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf DUF3973 PF13119.6 RKO90336.1 - 0.13 12.4 0.2 0.22 11.6 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3973) RGS PF00615.19 RKO90338.1 - 0.00057 20.1 0.0 0.00087 19.6 0.0 1.2 1 0 0 1 1 1 1 Regulator of G protein signaling domain ECF_trnsprt PF12822.7 RKO90339.1 - 0.16 12.1 5.6 0.27 11.3 5.6 1.3 1 0 0 1 1 1 0 ECF transporter, substrate-specific component DUF2892 PF11127.8 RKO90339.1 - 0.29 11.2 1.7 0.57 10.3 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2892) Abhydrolase_1 PF00561.20 RKO90341.1 - 5.2e-20 72.2 0.1 1e-18 67.9 0.1 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 RKO90341.1 - 1.9e-19 71.2 0.0 2.7e-19 70.7 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 RKO90341.1 - 5.1e-13 48.8 0.0 6.4e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 RKO90341.1 - 0.0008 19.5 0.0 0.0013 18.8 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein Ser_hydrolase PF06821.13 RKO90341.1 - 0.0015 18.4 0.0 0.0066 16.3 0.0 2.0 2 0 0 2 2 2 1 Serine hydrolase DUF2481 PF10654.9 RKO90343.1 - 0.17 11.9 0.0 0.38 10.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) DUF2481 PF10654.9 RKO90345.1 - 0.097 12.7 0.0 0.21 11.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) McyA_C PF12593.8 RKO90346.1 - 0.78 9.6 13.0 5.8 6.8 0.1 4.7 4 1 1 5 5 5 0 Microcystin synthetase C terminal Antimicrobial10 PF08105.11 RKO90346.1 - 9.9 6.3 7.7 3.8 7.7 0.4 3.4 2 2 2 4 4 4 0 Metchnikowin family Clathrin_lg_ch PF01086.17 RKO90348.1 - 4.1e-43 148.1 2.5 1.3e-36 126.8 0.0 2.1 2 0 0 2 2 2 2 Clathrin light chain rve_3 PF13683.6 RKO90348.1 - 0.13 12.0 0.5 0.32 10.8 0.5 1.6 1 1 0 1 1 1 0 Integrase core domain VIT1 PF01988.19 RKO90350.1 - 2.1e-43 148.7 0.0 2.5e-43 148.5 0.0 1.1 1 0 0 1 1 1 1 VIT family Ank_2 PF12796.7 RKO90352.1 - 1.6e-17 63.9 1.7 2.8e-06 27.8 0.0 3.5 2 1 2 4 4 4 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO90352.1 - 2.3e-10 40.8 5.5 0.097 13.3 0.1 5.3 4 2 0 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO90352.1 - 1.5e-07 31.1 12.2 15 6.6 0.0 8.2 7 1 1 8 8 8 2 Ankyrin repeat Ank_5 PF13857.6 RKO90352.1 - 6.7e-05 23.1 13.3 0.91 9.9 0.0 6.8 3 2 5 8 8 8 2 Ankyrin repeats (many copies) F-box PF00646.33 RKO90352.1 - 0.007 16.2 0.3 0.019 14.8 0.3 1.8 1 0 0 1 1 1 1 F-box domain Ank PF00023.30 RKO90352.1 - 0.27 11.8 12.5 9.2 6.9 0.5 5.7 1 1 3 4 4 4 0 Ankyrin repeat Glyco_hydro_31 PF01055.26 RKO90353.1 - 4.3e-80 270.1 1.1 6.5e-80 269.5 1.1 1.3 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 RKO90353.1 - 3.1e-25 88.3 0.3 1.3e-23 83.1 0.1 2.6 2 0 0 2 2 2 1 Galactose mutarotase-like Shadoo PF14999.6 RKO90353.1 - 0.16 12.1 0.1 0.28 11.3 0.1 1.3 1 0 0 1 1 1 0 Shadow of prion protein, neuroprotective Sortilin-Vps10 PF15902.5 RKO90355.1 - 1e-08 34.5 0.0 1.3e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, BNR PF02012.20 RKO90355.1 - 1.7 9.0 4.2 1.4 9.2 0.3 2.7 2 0 0 2 2 2 0 BNR/Asp-box repeat ANAPC5 PF12862.7 RKO90357.1 - 7.6e-08 32.3 5.7 1.4e-06 28.3 0.6 3.3 3 0 0 3 3 3 1 Anaphase-promoting complex subunit 5 TPR_12 PF13424.6 RKO90357.1 - 7.6e-07 29.3 12.3 0.0015 18.7 3.5 4.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO90357.1 - 0.00091 19.7 16.3 0.033 14.7 8.0 4.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO90357.1 - 0.001 19.6 1.2 0.78 10.5 0.2 3.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 RKO90357.1 - 0.078 13.1 12.0 1.1 9.6 1.7 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_10 PF13374.6 RKO90357.1 - 0.28 11.1 4.2 6.5 6.8 0.1 3.9 3 0 0 3 3 3 0 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO90357.1 - 0.36 11.1 8.4 3.6 7.9 0.1 4.2 4 1 1 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_1 PF00515.28 RKO90357.1 - 6.7 6.7 9.0 6.2 6.8 1.6 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat Uso1_p115_head PF04869.14 RKO90358.1 - 5.2e-78 262.3 0.0 1.4e-77 261.0 0.0 1.7 1 1 1 2 2 2 1 Uso1 / p115 like vesicle tethering protein, head region Arm_vescicular PF18770.1 RKO90358.1 - 1.6e-09 37.5 0.0 4.8e-09 36.0 0.0 1.9 1 0 0 1 1 1 1 Armadillo tether-repeat of vescicular transport factor Dioxygenase_N PF04444.14 RKO90358.1 - 0.11 12.4 0.0 1.4 8.8 0.0 2.5 2 0 0 2 2 2 0 Catechol dioxygenase N terminus CreA PF05981.12 RKO90358.1 - 0.13 12.3 0.0 0.25 11.3 0.0 1.4 1 0 0 1 1 1 0 CreA protein WD40 PF00400.32 RKO90360.1 - 2.8e-51 170.3 34.9 1e-05 26.2 0.1 11.8 12 0 0 12 12 12 10 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO90360.1 - 8.8e-22 77.2 3.5 2.6e-05 24.5 0.0 8.9 5 3 4 9 9 9 6 Anaphase-promoting complex subunit 4 WD40 domain Utp12 PF04003.12 RKO90360.1 - 8.3e-18 64.7 0.1 1.5e-17 63.9 0.1 1.4 1 0 0 1 1 1 1 Dip2/Utp12 Family Ge1_WD40 PF16529.5 RKO90360.1 - 3.6e-07 29.4 0.9 0.054 12.5 0.0 5.2 4 1 2 7 7 7 2 WD40 region of Ge1, enhancer of mRNA-decapping protein WD40_like PF17005.5 RKO90360.1 - 7e-06 25.6 0.0 0.71 9.1 0.0 4.2 4 1 0 4 4 4 2 WD40-like domain Nup160 PF11715.8 RKO90360.1 - 0.0028 16.4 4.6 3.1 6.3 0.0 5.7 5 2 2 8 8 8 1 Nucleoporin Nup120/160 Frtz PF11768.8 RKO90360.1 - 0.0057 15.0 0.0 0.016 13.6 0.0 1.7 2 0 0 2 2 2 1 WD repeat-containing and planar cell polarity effector protein Fritz Nbas_N PF15492.6 RKO90360.1 - 0.034 13.5 0.2 10 5.3 0.0 2.6 2 0 0 2 2 2 0 Neuroblastoma-amplified sequence, N terminal cNMP_binding PF00027.29 RKO90360.1 - 0.16 12.1 0.1 1.8 8.7 0.0 2.8 3 0 0 3 3 3 0 Cyclic nucleotide-binding domain Nucleoporin_FG PF13634.6 RKO90361.1 - 0.55 11.1 10.3 1 10.3 10.3 1.6 1 1 0 1 1 1 0 Nucleoporin FG repeat region RNB PF00773.19 RKO90363.1 - 1e-54 186.1 0.0 1.7e-54 185.4 0.0 1.4 1 0 0 1 1 1 1 RNB domain KilA-N PF04383.13 RKO90364.1 - 1.1e-06 28.4 0.2 0.0001 22.1 0.2 2.1 1 1 0 1 1 1 1 KilA-N domain DUF1394 PF07159.12 RKO90366.1 - 3.6e-09 36.3 0.0 4.4e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1394) CNTF PF01110.17 RKO90366.1 - 0.066 12.6 0.1 0.091 12.1 0.1 1.2 1 0 0 1 1 1 0 Ciliary neurotrophic factor Lactamase_B_4 PF13691.6 RKO90367.1 - 1e-18 66.8 0.0 4.6e-18 64.7 0.0 2.3 1 0 0 1 1 1 1 tRNase Z endonuclease Lactamase_B_2 PF12706.7 RKO90367.1 - 1.7e-14 53.8 0.2 3.2e-13 49.7 0.3 2.2 2 0 0 2 2 2 1 Beta-lactamase superfamily domain AAA PF00004.29 RKO90368.1 - 6.9e-45 152.7 0.0 1.2e-44 151.9 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 RKO90368.1 - 1e-11 44.4 0.1 5.9e-11 42.0 0.0 2.1 2 0 0 2 2 2 1 AAA+ lid domain RuvB_N PF05496.12 RKO90368.1 - 9.7e-09 35.2 0.0 2.6e-05 24.0 0.0 2.4 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain Peptidase_M41 PF01434.18 RKO90368.1 - 1.3e-08 35.0 0.1 2.5e-08 34.0 0.1 1.5 1 0 0 1 1 1 1 Peptidase family M41 AAA_16 PF13191.6 RKO90368.1 - 3e-06 27.7 1.4 0.00015 22.2 0.6 3.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 RKO90368.1 - 7.3e-06 26.0 0.0 3e-05 24.0 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) TIP49 PF06068.13 RKO90368.1 - 1.4e-05 24.5 0.0 3.5e-05 23.2 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain IstB_IS21 PF01695.17 RKO90368.1 - 0.00017 21.4 0.0 0.00052 19.8 0.0 2.0 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_22 PF13401.6 RKO90368.1 - 0.00022 21.5 0.1 0.033 14.5 0.0 2.7 2 1 0 3 3 2 1 AAA domain DUF815 PF05673.13 RKO90368.1 - 0.00062 19.0 0.0 0.001 18.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_2 PF07724.14 RKO90368.1 - 0.0018 18.5 0.0 0.0058 16.8 0.0 1.9 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) Bac_DnaA PF00308.18 RKO90368.1 - 0.0046 16.8 0.0 0.025 14.4 0.0 2.2 2 1 0 2 2 2 1 Bacterial dnaA protein AAA_24 PF13479.6 RKO90368.1 - 0.005 16.6 0.0 0.014 15.1 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 RKO90368.1 - 0.009 16.2 0.1 0.024 14.8 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 RKO90368.1 - 0.0098 16.4 0.0 0.018 15.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 RKO90368.1 - 0.014 15.0 0.2 0.2 11.2 0.1 2.2 1 1 1 2 2 2 0 AAA domain TsaE PF02367.17 RKO90368.1 - 0.015 15.3 0.0 0.03 14.3 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Mg_chelatase PF01078.21 RKO90368.1 - 0.016 14.6 0.0 0.041 13.3 0.0 1.7 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 RKO90368.1 - 0.018 15.1 0.0 0.26 11.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 RKO90368.1 - 0.021 14.3 0.1 0.2 11.1 0.1 2.1 1 1 0 1 1 1 0 P-loop containing dynein motor region AAA_17 PF13207.6 RKO90368.1 - 0.025 15.0 0.0 0.052 14.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 RKO90368.1 - 0.026 14.8 0.0 0.052 13.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 RKO90368.1 - 0.051 12.9 0.1 4.6 6.5 0.0 2.4 2 0 0 2 2 2 0 KaiC Sigma54_activat PF00158.26 RKO90368.1 - 0.06 13.0 0.1 0.66 9.6 0.0 2.5 3 0 0 3 3 3 0 Sigma-54 interaction domain ATPase_2 PF01637.18 RKO90368.1 - 0.062 13.2 0.1 4.3 7.2 0.0 2.4 1 1 0 2 2 2 0 ATPase domain predominantly from Archaea Zeta_toxin PF06414.12 RKO90368.1 - 0.065 12.5 0.0 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin NACHT PF05729.12 RKO90368.1 - 0.076 12.9 0.1 0.57 10.1 0.0 2.1 2 0 0 2 2 2 0 NACHT domain RNA_helicase PF00910.22 RKO90368.1 - 0.093 13.1 0.0 0.24 11.8 0.0 1.8 1 1 0 1 1 1 0 RNA helicase AAA_11 PF13086.6 RKO90368.1 - 0.11 12.3 0.6 0.2 11.4 0.1 1.8 2 1 0 2 2 2 0 AAA domain Parvo_NS1 PF01057.17 RKO90368.1 - 0.23 10.5 0.0 0.38 9.8 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 DUF1874 PF08960.10 RKO90369.1 - 0.08 13.1 1.1 0.99 9.6 0.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF1874) L31 PF09784.9 RKO90369.1 - 0.94 9.9 4.7 3.4 8.2 4.7 2.0 1 1 0 1 1 1 0 Mitochondrial ribosomal protein L31 DUF5537 PF17690.1 RKO90370.1 - 0.094 12.4 0.0 1.1 8.9 0.0 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5537) WD40 PF00400.32 RKO90374.1 - 3.5e-19 68.8 4.7 0.00093 20.0 0.0 6.8 6 1 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO90374.1 - 1.7e-07 31.5 0.0 0.65 10.3 0.0 4.5 2 2 3 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 RKO90374.1 - 0.024 14.0 0.0 0.04 13.2 0.0 1.2 1 0 0 1 1 1 0 WD40-like domain Ge1_WD40 PF16529.5 RKO90374.1 - 0.032 13.2 0.1 0.18 10.8 0.0 2.2 2 2 1 3 3 3 0 WD40 region of Ge1, enhancer of mRNA-decapping protein PD40 PF07676.12 RKO90374.1 - 0.13 12.2 0.0 1.4 9.0 0.0 2.5 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat HYLS1_C PF15311.6 RKO90375.1 - 1.3e-08 35.4 4.1 1.3e-05 25.9 1.7 2.9 2 0 0 2 2 2 2 Hydrolethalus syndrome protein 1 C-terminus Titin_Z PF09042.11 RKO90375.1 - 0.0046 16.9 0.2 0.012 15.5 0.2 1.7 1 0 0 1 1 1 1 Titin Z VWA PF00092.28 RKO90375.1 - 0.045 14.0 0.0 0.87 9.8 0.0 2.3 2 0 0 2 2 2 0 von Willebrand factor type A domain 4F5 PF04419.14 RKO90376.1 - 1.9e-07 31.8 12.2 3.1e-07 31.2 12.2 1.3 1 0 0 1 1 1 1 4F5 protein family Ank_5 PF13857.6 RKO90379.1 - 5.1e-09 36.2 0.8 5.6e-08 32.9 0.0 2.5 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO90379.1 - 0.00017 22.1 0.1 0.0025 18.4 0.0 2.2 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 RKO90379.1 - 0.00066 20.0 2.1 0.0014 19.0 0.1 2.4 2 0 0 2 2 2 1 Ankyrin repeat Ank_3 PF13606.6 RKO90379.1 - 0.017 15.6 0.1 0.068 13.8 0.1 2.1 1 0 0 1 1 1 0 Ankyrin repeat Ank_4 PF13637.6 RKO90379.1 - 0.071 13.7 0.6 11 6.7 0.1 3.4 3 1 1 4 4 4 0 Ankyrin repeats (many copies) DUF2647 PF10839.8 RKO90380.1 - 0.083 12.9 0.0 0.16 12.0 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2647) G-alpha PF00503.20 RKO90381.1 - 1e-84 284.7 0.0 2.2e-84 283.7 0.0 1.5 1 1 0 1 1 1 1 G-protein alpha subunit Arf PF00025.21 RKO90381.1 - 2.6e-12 46.6 0.0 5.4e-10 39.0 0.0 2.8 3 0 0 3 3 3 1 ADP-ribosylation factor family Roc PF08477.13 RKO90381.1 - 1.7e-05 25.0 0.0 0.041 14.1 0.0 2.5 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 RKO90381.1 - 0.0016 17.9 0.0 0.0041 16.6 0.0 1.7 2 0 0 2 2 2 1 Bacterial TniB protein Gtr1_RagA PF04670.12 RKO90381.1 - 0.0083 15.5 0.0 1.4 8.2 0.0 2.3 2 0 0 2 2 2 2 Gtr1/RagA G protein conserved region FtsK_SpoIIIE PF01580.18 RKO90381.1 - 0.0086 15.4 0.0 0.02 14.3 0.0 1.6 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_16 PF13191.6 RKO90381.1 - 0.037 14.4 0.1 0.082 13.3 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain ATPase_2 PF01637.18 RKO90381.1 - 0.052 13.5 0.0 0.096 12.6 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_22 PF13401.6 RKO90381.1 - 0.15 12.3 0.0 0.28 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF4203 PF13886.6 RKO90383.1 - 2.3e-28 99.2 35.8 3e-28 98.9 35.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) DUF5510 PF17629.2 RKO90383.1 - 7.9 6.5 14.3 0.99 9.4 6.4 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5510) ZapB PF06005.12 RKO90384.1 - 0.001 19.4 0.5 0.0015 19.0 0.5 1.2 1 0 0 1 1 1 1 Cell division protein ZapB CENP-F_leu_zip PF10473.9 RKO90384.1 - 0.001 19.1 0.1 0.0011 19.0 0.1 1.1 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HALZ PF02183.18 RKO90384.1 - 0.0014 18.8 1.0 0.0026 18.0 1.0 1.5 1 0 0 1 1 1 1 Homeobox associated leucine zipper DivIVA PF05103.13 RKO90384.1 - 0.004 17.2 0.0 0.0049 17.0 0.0 1.1 1 0 0 1 1 1 1 DivIVA protein DivIC PF04977.15 RKO90384.1 - 0.0085 15.8 0.1 0.013 15.3 0.1 1.3 1 0 0 1 1 1 1 Septum formation initiator DUF4635 PF15466.6 RKO90384.1 - 0.0093 15.5 0.1 0.012 15.1 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4635) GIT_CC PF16559.5 RKO90384.1 - 0.018 14.9 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor MerR-DNA-bind PF09278.11 RKO90384.1 - 0.018 15.6 0.1 0.029 14.9 0.1 1.4 1 0 0 1 1 1 0 MerR, DNA binding Cnn_1N PF07989.11 RKO90384.1 - 0.02 15.0 0.0 0.03 14.5 0.0 1.2 1 0 0 1 1 1 0 Centrosomin N-terminal motif 1 FlaC_arch PF05377.11 RKO90384.1 - 0.042 14.3 1.1 0.043 14.2 0.1 1.5 2 0 0 2 2 1 0 Flagella accessory protein C (FlaC) bZIP_2 PF07716.15 RKO90384.1 - 0.048 13.8 0.7 0.079 13.1 0.7 1.4 1 0 0 1 1 1 0 Basic region leucine zipper CLZ PF16526.5 RKO90384.1 - 0.051 13.9 0.2 0.077 13.4 0.2 1.2 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Ax_dynein_light PF10211.9 RKO90384.1 - 0.057 13.4 0.1 0.077 12.9 0.1 1.1 1 0 0 1 1 1 0 Axonemal dynein light chain DUF1640 PF07798.11 RKO90384.1 - 0.058 13.4 0.0 0.076 13.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1640) PspA_IM30 PF04012.12 RKO90384.1 - 0.07 12.7 0.6 0.096 12.3 0.6 1.2 1 0 0 1 1 1 0 PspA/IM30 family TSC22 PF01166.18 RKO90384.1 - 0.073 13.4 0.5 0.12 12.7 0.5 1.4 1 0 0 1 1 1 0 TSC-22/dip/bun family DUF2968 PF11180.8 RKO90384.1 - 0.11 12.1 0.3 0.15 11.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) DUF2730 PF10805.8 RKO90384.1 - 0.13 12.4 0.0 0.17 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) TolA_bind_tri PF16331.5 RKO90384.1 - 0.14 12.2 1.2 0.27 11.3 1.2 1.5 1 1 0 1 1 1 0 TolA binding protein trimerisation Hemagglutinin PF00509.18 RKO90384.1 - 0.17 10.2 0.0 0.2 10.0 0.0 1.0 1 0 0 1 1 1 0 Haemagglutinin PAP_assoc PF03828.19 RKO90385.1 - 1.8e-17 63.3 0.0 3e-17 62.6 0.0 1.4 1 0 0 1 1 1 1 Cid1 family poly A polymerase EF-hand_1 PF00036.32 RKO90386.1 - 0.04 13.5 0.4 0.088 12.4 0.4 1.6 1 0 0 1 1 1 0 EF hand EF-hand_5 PF13202.6 RKO90386.1 - 0.061 12.8 0.6 0.093 12.3 0.6 1.3 1 0 0 1 1 1 0 EF hand EF-hand_7 PF13499.6 RKO90386.1 - 0.088 13.3 0.1 0.15 12.6 0.1 1.3 1 0 0 1 1 1 0 EF-hand domain pair EF-hand_6 PF13405.6 RKO90386.1 - 0.22 11.5 0.6 0.52 10.4 0.6 1.6 1 0 0 1 1 1 0 EF-hand domain Glyco_hydro_26 PF02156.15 RKO90386.1 - 0.32 10.4 3.1 0.37 10.2 1.8 1.7 1 1 0 2 2 2 0 Glycosyl hydrolase family 26 AzlD PF05437.12 RKO90388.1 - 0.0024 18.0 2.0 0.0036 17.5 2.0 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) DDHD PF02862.17 RKO90389.1 - 7.8e-31 108.0 0.5 9.8e-29 101.1 0.5 2.4 1 1 0 1 1 1 1 DDHD domain PGAP1 PF07819.13 RKO90389.1 - 0.082 12.6 0.1 0.14 11.9 0.1 1.3 1 0 0 1 1 1 0 PGAP1-like protein DUF676 PF05057.14 RKO90389.1 - 0.18 11.3 0.0 0.3 10.6 0.0 1.2 1 0 0 1 1 1 0 Putative serine esterase (DUF676) DUF4611 PF15387.6 RKO90389.1 - 1.8 8.8 4.5 1.1 9.5 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4611) Lipase_GDSL_2 PF13472.6 RKO90390.1 - 2.1e-09 38.0 0.1 3e-09 37.5 0.1 1.2 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL PF00657.22 RKO90390.1 - 5.7e-07 29.7 0.0 7.4e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase WD40 PF00400.32 RKO90391.1 - 1.9e-21 76.0 0.4 4.9e-06 27.2 0.0 5.3 5 0 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO90391.1 - 9.6e-08 32.2 0.1 0.031 14.6 0.0 4.1 3 2 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 RKO90391.1 - 2.9e-06 26.5 0.0 0.033 13.1 0.0 2.6 1 1 0 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein SGL PF08450.12 RKO90391.1 - 0.0061 16.2 0.2 0.18 11.4 0.1 2.7 1 1 2 3 3 3 1 SMP-30/Gluconolactonase/LRE-like region GreA_GreB PF01272.19 RKO90391.1 - 0.029 14.3 0.0 0.058 13.3 0.0 1.4 1 0 0 1 1 1 0 Transcription elongation factor, GreA/GreB, C-term Nup160 PF11715.8 RKO90391.1 - 0.065 11.9 0.3 3.1 6.3 0.0 2.7 2 1 1 3 3 3 0 Nucleoporin Nup120/160 Cytochrom_D1 PF02239.16 RKO90391.1 - 0.066 11.7 0.5 9.2 4.7 0.2 2.3 1 1 1 2 2 2 0 Cytochrome D1 heme domain Mub_B2 PF17966.1 RKO90391.1 - 0.075 13.8 0.4 0.27 12.0 0.1 2.0 1 1 1 2 2 2 0 Mub B2-like domain zf-C2H2 PF00096.26 RKO90392.1 - 1.3e-10 41.1 17.5 0.00039 20.7 2.6 3.6 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO90392.1 - 3.8e-06 27.3 17.5 0.0055 17.5 1.5 3.8 3 0 0 3 3 3 3 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO90392.1 - 0.00058 20.2 6.8 0.24 11.9 0.4 3.9 3 0 0 3 3 3 2 Zinc-finger double domain zf-Di19 PF05605.12 RKO90392.1 - 0.0068 16.7 4.4 0.0068 16.7 4.4 2.1 1 1 1 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_jaz PF12171.8 RKO90392.1 - 0.3 11.4 6.8 1.2 9.6 0.9 3.1 3 0 0 3 3 3 0 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 RKO90392.1 - 0.31 11.5 5.5 6.7 7.3 0.1 3.6 4 0 0 4 4 4 0 Zinc-finger of C2H2 type zf-C2H2_6 PF13912.6 RKO90392.1 - 0.48 10.5 5.7 9.9 6.3 0.1 3.1 3 0 0 3 3 3 0 C2H2-type zinc finger Elf1 PF05129.13 RKO90392.1 - 6.9 6.8 6.8 8.4 6.5 3.5 2.1 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like UQ_con PF00179.26 RKO90393.1 - 1.2e-40 138.5 0.0 1.4e-40 138.1 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UBA PF00627.31 RKO90393.1 - 2.3e-08 33.7 0.3 2.3e-08 33.7 0.3 1.8 2 0 0 2 2 2 1 UBA/TS-N domain Prok-E2_B PF14461.6 RKO90393.1 - 0.0052 16.5 0.0 0.0079 15.9 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 RKO90393.1 - 0.16 12.3 0.0 0.22 11.8 0.0 1.3 1 0 0 1 1 1 0 RWD domain DUF3421 PF11901.8 RKO90395.1 - 3.2e-25 88.3 1.8 1.3e-12 47.7 0.1 2.7 2 1 1 3 3 3 2 Protein of unknown function (DUF3421) GPHR_N PF12537.8 RKO90396.1 - 2.1e-24 85.4 0.1 5.8e-24 84.0 0.0 1.8 2 0 0 2 2 2 1 The Golgi pH Regulator (GPHR) Family N-terminal ABA_GPCR PF12430.8 RKO90396.1 - 4.2e-15 56.0 0.5 4.2e-15 56.0 0.5 1.9 2 0 0 2 2 2 1 Abscisic acid G-protein coupled receptor HSP20 PF00011.21 RKO90398.1 - 3e-11 43.4 0.0 3.9e-11 43.0 0.0 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 RKO90398.1 - 0.028 14.0 0.0 0.047 13.3 0.0 1.3 1 0 0 1 1 1 0 HSP20-like domain found in ArsA HSP20 PF00011.21 RKO90399.1 - 2.6e-09 37.1 0.8 4.9e-09 36.3 0.0 1.8 2 0 0 2 2 2 1 Hsp20/alpha crystallin family SelP_N PF04592.14 RKO90399.1 - 0.075 12.4 10.7 0.15 11.4 10.7 1.5 1 0 0 1 1 1 0 Selenoprotein P, N terminal region DUF4718 PF15842.5 RKO90399.1 - 2.8 7.7 7.7 4.8 6.9 7.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4718) PARP PF00644.20 RKO90400.1 - 4.7e-59 199.3 0.0 8.4e-59 198.4 0.0 1.4 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain PARP_reg PF02877.14 RKO90400.1 - 4e-41 140.3 0.4 5.5e-41 139.9 0.4 1.2 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase, regulatory domain DUF3677 PF12432.8 RKO90400.1 - 0.036 14.4 0.5 0.18 12.2 0.0 2.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3677) EMP70 PF02990.16 RKO90401.1 - 1.1e-35 123.3 0.0 1.3e-35 123.1 0.0 1.0 1 0 0 1 1 1 1 Endomembrane protein 70 Porin_3 PF01459.22 RKO90402.1 - 7.2e-51 173.2 0.0 8.6e-51 173.0 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic porin NAD_Gly3P_dh_N PF01210.23 RKO90404.1 - 4.1e-52 176.3 0.3 5.8e-52 175.8 0.3 1.2 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_Gly3P_dh_C PF07479.14 RKO90404.1 - 3.1e-15 56.7 0.0 9.2e-15 55.2 0.0 1.7 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus F420_oxidored PF03807.17 RKO90404.1 - 0.013 16.1 0.2 0.19 12.3 0.2 2.3 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Transglut_core PF01841.19 RKO90406.1 - 0.062 13.7 0.0 0.093 13.2 0.0 1.4 1 0 0 1 1 1 0 Transglutaminase-like superfamily Cyclin PF08613.11 RKO90408.1 - 0.00017 22.0 0.0 0.00028 21.3 0.0 1.3 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 RKO90408.1 - 0.19 11.4 0.1 0.32 10.7 0.1 1.2 1 0 0 1 1 1 0 Cyclin, N-terminal domain RabGAP-TBC PF00566.18 RKO90409.1 - 3e-24 85.9 0.2 3.8e-24 85.6 0.2 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DUF2024 PF09630.10 RKO90409.1 - 0.15 12.0 0.0 0.75 9.7 0.0 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF2024) CGI-121 PF08617.10 RKO90411.1 - 9.2e-31 107.2 0.0 1e-30 107.0 0.0 1.0 1 0 0 1 1 1 1 Kinase binding protein CGI-121 SKA1 PF07160.12 RKO90412.1 - 3.3e-39 135.2 0.0 4.2e-39 134.8 0.0 1.1 1 0 0 1 1 1 1 Spindle and kinetochore-associated protein 1 DUF4570 PF15134.6 RKO90412.1 - 0.078 13.0 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4570) Rpp20 PF12328.8 RKO90413.1 - 2.1e-13 50.4 0.4 3.7e-07 30.2 0.0 2.0 1 1 1 2 2 2 2 Rpp20 subunit of nuclear RNase MRP and P Alba PF01918.21 RKO90413.1 - 2.4e-12 46.5 0.0 2.8e-12 46.3 0.0 1.1 1 0 0 1 1 1 1 Alba PEPCK_ATP PF01293.20 RKO90414.1 - 1.8e-203 676.4 0.0 2e-203 676.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase AAA_33 PF13671.6 RKO90414.1 - 0.12 12.5 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain Diphthamide_syn PF01866.17 RKO90417.1 - 2.1e-95 319.7 0.0 2.6e-95 319.4 0.0 1.1 1 0 0 1 1 1 1 Putative diphthamide synthesis protein SPT2 PF08243.11 RKO90418.1 - 6.9e-13 49.1 18.2 6.9e-13 49.1 18.2 6.5 4 1 1 5 5 5 1 SPT2 chromatin protein Allexi_40kDa PF05549.11 RKO90418.1 - 0.05 13.1 1.9 0.1 12.1 1.9 1.5 1 0 0 1 1 1 0 Allexivirus 40kDa protein Pkinase PF00069.25 RKO90421.1 - 8.5e-34 117.1 0.0 9.5e-34 117.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO90421.1 - 1.3e-17 64.0 0.0 1.5e-17 63.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO90421.1 - 8.4e-05 22.6 0.0 0.0001 22.4 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 RKO90421.1 - 0.00022 20.3 0.1 0.00025 20.1 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 RKO90421.1 - 0.05 13.2 0.0 0.071 12.7 0.0 1.1 1 0 0 1 1 1 0 RIO1 family Seadorna_VP7 PF07387.11 RKO90421.1 - 0.075 12.1 0.0 0.092 11.8 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 Choline_kinase PF01633.20 RKO90421.1 - 0.089 12.4 0.0 0.12 12.0 0.0 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase Kinase-like PF14531.6 RKO90421.1 - 0.095 12.0 0.0 0.23 10.7 0.0 1.6 1 1 0 1 1 1 0 Kinase-like Mod_r PF07200.13 RKO90422.1 - 3.7e-11 43.3 8.2 6.1e-11 42.6 8.2 1.3 1 0 0 1 1 1 1 Modifier of rudimentary (Mod(r)) protein UEV PF05743.13 RKO90422.1 - 0.0041 17.0 0.8 0.0071 16.2 0.8 1.4 1 0 0 1 1 1 1 UEV domain Med13_C PF06333.12 RKO90422.1 - 0.0046 16.3 0.4 0.0078 15.5 0.4 1.4 1 0 0 1 1 1 1 Mediator complex subunit 13 C-terminal domain UQ_con PF00179.26 RKO90422.1 - 0.068 12.8 0.2 0.12 12.0 0.2 1.4 1 0 0 1 1 1 0 Ubiquitin-conjugating enzyme PXA PF02194.15 RKO90423.1 - 2.3e-42 145.0 0.6 4.6e-42 144.0 0.6 1.5 1 0 0 1 1 1 1 PXA domain Nexin_C PF08628.12 RKO90423.1 - 8.3e-23 81.1 0.3 2.5e-22 79.5 0.0 2.0 2 0 0 2 2 2 1 Sorting nexin C terminal PX PF00787.24 RKO90423.1 - 7.7e-16 58.1 0.0 2.6e-15 56.4 0.0 1.9 2 0 0 2 2 2 1 PX domain RGS PF00615.19 RKO90423.1 - 1.2e-12 48.1 0.0 2.5e-12 47.1 0.0 1.6 1 0 0 1 1 1 1 Regulator of G protein signaling domain Isy1 PF06246.12 RKO90423.1 - 0.0024 17.5 1.0 0.004 16.8 1.0 1.3 1 0 0 1 1 1 1 Isy1-like splicing family cNMP_binding PF00027.29 RKO90424.1 - 9.3e-12 44.9 0.0 3.5e-11 43.0 0.0 2.1 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain PepSY_TM PF03929.16 RKO90424.1 - 0.052 13.2 0.0 0.13 11.9 0.0 1.7 1 0 0 1 1 1 0 PepSY-associated TM region Ion_trans_2 PF07885.16 RKO90424.1 - 1.4 8.9 4.9 0.4 10.7 0.7 2.2 2 0 0 2 2 2 0 Ion channel ECH_1 PF00378.20 RKO90426.1 - 4.3e-12 45.9 0.1 1e-11 44.6 0.1 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase HATPase_c_3 PF13589.6 RKO90428.1 - 1.5e-07 31.3 0.3 1.9e-07 31.0 0.3 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 RKO90428.1 - 0.0041 17.6 0.2 0.0055 17.2 0.2 1.4 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HNF_C PF09354.10 RKO90428.1 - 0.15 13.2 0.1 0.27 12.3 0.1 1.4 1 0 0 1 1 1 0 HNF3 C-terminal domain RNA_pol_L_2 PF13656.6 RKO90429.1 - 7.1e-27 93.0 0.1 8.4e-27 92.8 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 RKO90429.1 - 6.3e-09 35.1 0.0 8.8e-09 34.7 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Pentapeptide_2 PF01469.18 RKO90432.1 - 0.078 12.9 1.0 0.11 12.5 1.0 1.1 1 0 0 1 1 1 0 Pentapeptide repeats (8 copies) HATPase_c_3 PF13589.6 RKO90434.1 - 1.5e-09 37.8 0.0 3.5e-09 36.6 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 RKO90434.1 - 1.4e-08 35.2 0.1 3.2e-08 34.1 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MutL_C PF08676.11 RKO90434.1 - 2e-06 27.6 0.0 5.5e-06 26.2 0.0 1.6 1 1 0 1 1 1 1 MutL C terminal dimerisation domain DNA_mis_repair PF01119.19 RKO90434.1 - 0.00017 21.3 0.0 0.018 14.7 0.0 2.5 2 0 0 2 2 2 2 DNA mismatch repair protein, C-terminal domain TTL PF03133.15 RKO90436.1 - 3.8e-38 131.3 0.1 4.8e-38 130.9 0.1 1.1 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 RKO90436.1 - 0.0042 16.4 0.0 0.021 14.1 0.0 1.9 1 1 1 2 2 2 1 YheC/D like ATP-grasp TT_ORF2 PF02957.15 RKO90436.1 - 0.53 11.2 5.6 1 10.3 5.6 1.4 1 0 0 1 1 1 0 TT viral ORF2 DNA_pol_phi PF04931.13 RKO90436.1 - 0.74 7.9 3.0 0.97 7.5 3.0 1.1 1 0 0 1 1 1 0 DNA polymerase phi SPRY PF00622.28 RKO90439.1 - 0.19 11.9 0.4 0.54 10.4 0.4 1.7 1 0 0 1 1 1 0 SPRY domain RabGAP-TBC PF00566.18 RKO90441.1 - 1.2e-42 146.0 0.0 2.1e-42 145.2 0.0 1.4 1 0 0 1 1 1 1 Rab-GTPase-TBC domain GRAM PF02893.20 RKO90441.1 - 2.5e-15 56.3 2.3 2.7e-07 30.4 0.1 2.9 2 1 0 2 2 2 2 GRAM domain EF-hand_6 PF13405.6 RKO90441.1 - 3.3e-05 23.5 0.9 0.00012 21.7 0.9 2.0 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 RKO90441.1 - 0.00012 22.5 0.2 0.0011 19.3 0.0 2.7 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_1 PF00036.32 RKO90441.1 - 0.0002 20.7 1.3 0.00044 19.6 0.4 2.2 2 0 0 2 2 2 1 EF hand EF-hand_5 PF13202.6 RKO90441.1 - 0.024 14.1 0.4 0.076 12.5 0.4 1.8 1 0 0 1 1 1 0 EF hand PRESAN PF09687.10 RKO90441.1 - 0.11 13.1 0.0 0.25 11.9 0.0 1.5 1 0 0 1 1 1 0 Plasmodium RESA N-terminal hDGE_amylase PF14701.6 RKO90442.1 - 1.1e-159 532.2 0.0 1.5e-159 531.8 0.0 1.1 1 0 0 1 1 1 1 Glycogen debranching enzyme, glucanotransferase domain GDE_C PF06202.14 RKO90442.1 - 2.7e-93 313.0 0.0 4e-93 312.4 0.0 1.1 1 0 0 1 1 1 1 Amylo-alpha-1,6-glucosidase hGDE_central PF14702.6 RKO90442.1 - 1.2e-49 169.3 0.0 1.7e-33 116.4 0.0 2.6 2 1 0 2 2 2 2 Central domain of human glycogen debranching enzyme hGDE_N PF14699.6 RKO90442.1 - 5.4e-07 29.7 0.0 1.5e-05 25.0 0.0 2.4 1 1 0 1 1 1 1 N-terminal domain from the human glycogen debranching enzyme Alpha-amylase PF00128.24 RKO90442.1 - 0.21 11.1 0.0 0.67 9.5 0.0 1.7 2 1 1 3 3 3 0 Alpha amylase, catalytic domain V-SNARE_C PF12352.8 RKO90444.1 - 9.4e-05 22.6 4.3 0.027 14.7 0.5 3.6 3 1 1 4 4 4 1 Snare region anchored in the vesicle membrane C-terminus DUF5089 PF17002.5 RKO90444.1 - 0.0007 19.5 4.0 0.0066 16.3 0.1 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF5089) FliJ PF02050.16 RKO90444.1 - 0.004 17.4 4.3 0.043 14.0 0.3 2.2 2 0 0 2 2 2 1 Flagellar FliJ protein DUF16 PF01519.16 RKO90444.1 - 0.018 15.5 3.5 1.4 9.5 0.2 2.4 2 1 0 2 2 2 0 Protein of unknown function DUF16 SNARE PF05739.19 RKO90444.1 - 0.026 14.5 1.9 1.7 8.7 0.3 2.6 2 0 0 2 2 2 0 SNARE domain APG17 PF04108.12 RKO90444.1 - 0.064 12.4 3.3 0.34 10.0 0.1 2.0 2 0 0 2 2 2 0 Autophagy protein Apg17 RIG-I_C PF18119.1 RKO90444.1 - 0.073 13.1 0.7 12 5.9 0.2 2.2 2 0 0 2 2 2 0 RIG-I receptor C-terminal domain DUF484 PF04340.12 RKO90444.1 - 0.075 12.7 1.6 0.11 12.1 1.6 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF484 Prefoldin_3 PF13758.6 RKO90444.1 - 0.14 12.2 2.2 0.41 10.7 0.3 2.2 2 1 1 3 3 3 0 Prefoldin subunit NPV_P10 PF05531.12 RKO90444.1 - 0.18 12.3 4.3 4 8.0 0.2 2.9 2 2 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Sec34 PF04136.15 RKO90444.1 - 0.18 11.7 2.7 2.7 7.8 0.7 2.1 2 0 0 2 2 2 0 Sec34-like family Laminin_II PF06009.12 RKO90444.1 - 0.25 11.3 5.8 1.7 8.6 0.2 2.3 2 0 0 2 2 2 0 Laminin Domain II DUF948 PF06103.11 RKO90444.1 - 0.45 10.8 4.5 2 8.7 0.2 2.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) BLOC1_2 PF10046.9 RKO90444.1 - 0.84 10.0 7.4 2.6 8.4 0.2 2.3 2 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 RKO90444.1 - 1.5 8.8 4.8 1.7 8.7 0.7 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) RNA_pol_Rpb1_2 PF00623.20 RKO90446.1 - 3.3e-21 76.2 0.0 6.8e-21 75.2 0.0 1.5 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_1 PF04997.12 RKO90446.1 - 1.4e-19 70.6 3.5 3.7e-19 69.2 3.5 1.6 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 1 ubiquitin PF00240.23 RKO90447.1 - 3.3e-32 110.1 0.7 3.6e-32 109.9 0.7 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 RKO90447.1 - 8.2e-16 57.6 0.6 9e-16 57.5 0.6 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 RKO90447.1 - 3.4e-05 24.2 0.1 0.00016 22.1 0.1 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain TBK1_ULD PF18396.1 RKO90447.1 - 0.0021 18.0 0.0 0.0022 17.9 0.0 1.2 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_4 PF18036.1 RKO90447.1 - 0.0099 15.9 1.0 1.3 9.2 0.2 2.0 1 1 1 2 2 2 2 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 RKO90447.1 - 0.013 15.6 0.1 0.03 14.4 0.1 1.6 1 1 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Sde2_N_Ubi PF13019.6 RKO90447.1 - 0.024 14.5 0.0 0.027 14.3 0.0 1.1 1 0 0 1 1 1 0 Silencing defective 2 N-terminal ubiquitin domain Ubiquitin_5 PF18037.1 RKO90447.1 - 0.024 15.0 0.2 0.029 14.7 0.2 1.1 1 0 0 1 1 1 0 Ubiquitin-like domain Ank_4 PF13637.6 RKO90449.1 - 2.4e-07 31.2 0.2 0.087 13.4 0.0 3.4 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO90449.1 - 1.9e-06 28.3 0.0 0.00019 21.9 0.0 2.4 2 1 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO90449.1 - 0.00013 22.2 0.3 2.1 8.8 0.0 3.7 2 2 2 4 4 4 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO90449.1 - 0.0011 19.3 0.2 1.3 9.8 0.1 3.7 3 0 0 3 3 3 1 Ankyrin repeat WD40 PF00400.32 RKO90450.1 - 1.3e-11 44.9 18.8 0.0061 17.4 0.3 5.7 5 0 0 5 5 5 4 WD domain, G-beta repeat F-box-like PF12937.7 RKO90450.1 - 8.8e-05 22.3 1.3 0.00011 22.0 0.1 1.9 2 0 0 2 2 2 1 F-box-like DUF3720 PF12517.8 RKO90450.1 - 0.074 14.0 1.4 0.18 12.8 1.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3720) PALB2_WD40 PF16756.5 RKO90450.1 - 0.084 11.8 0.0 2.2 7.1 0.0 2.2 2 0 0 2 2 2 0 Partner and localizer of BRCA2 WD40 domain Ank_5 PF13857.6 RKO90451.1 - 0.00095 19.4 0.2 1.2 9.6 0.0 4.2 3 2 2 5 5 5 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO90451.1 - 0.0017 18.9 0.2 8.3 7.1 0.0 3.5 3 0 0 3 3 3 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO90451.1 - 0.0092 16.5 0.2 1.4 9.6 0.1 2.8 2 1 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO90451.1 - 0.068 13.8 0.1 28 5.7 0.0 4.2 5 0 0 5 5 5 0 Ankyrin repeat OPT PF03169.15 RKO90452.1 - 1.4e-37 129.6 5.7 1.6e-37 129.5 5.7 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein Ribosomal_S2 PF00318.20 RKO90453.1 - 1.5e-25 89.7 0.1 2e-12 46.8 0.0 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 40S_SA_C PF16122.5 RKO90453.1 - 5.3e-07 30.9 1.6 1.2e-06 29.7 1.6 1.6 1 0 0 1 1 1 1 40S ribosomal protein SA C-terminus Glyoxal_oxid_N PF07250.11 RKO90455.1 - 2.4e-12 46.6 0.4 2.5e-09 36.7 0.5 4.0 3 1 0 3 3 3 2 Glyoxal oxidase N-terminus Kelch_3 PF13415.6 RKO90455.1 - 0.83 10.0 4.0 3.6 8.0 0.1 3.5 3 0 0 3 3 3 0 Galactose oxidase, central domain D5_N PF08706.11 RKO90456.1 - 8.4e-09 35.9 0.3 2.5e-08 34.3 0.1 1.9 2 0 0 2 2 2 1 D5 N terminal like Trypan_PARP PF05887.11 RKO90457.1 - 0.0032 17.4 34.4 0.14 12.2 34.4 2.1 1 1 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) PlyB_C PF18684.1 RKO90457.1 - 0.015 15.1 0.0 0.019 14.7 0.0 1.2 1 0 0 1 1 1 0 Pleurotolysin B C-terminal domain NESP55 PF06390.12 RKO90457.1 - 0.75 9.4 18.8 2.6 7.6 8.7 2.1 1 1 1 2 2 2 0 Neuroendocrine-specific golgi protein P55 (NESP55) Rib_recp_KP_reg PF05104.12 RKO90457.1 - 5.4 8.0 10.2 4.7 8.2 9.3 1.4 1 1 0 1 1 1 0 Ribosome receptor lysine/proline rich region Inhibitor_I42 PF09394.10 RKO90458.1 - 0.048 14.1 0.5 0.4 11.1 0.1 2.7 2 0 0 2 2 2 0 Chagasin family peptidase inhibitor I42 p450 PF00067.22 RKO90461.1 - 2.4e-18 66.1 0.0 2.9e-18 65.9 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 ASH PF15780.5 RKO90462.1 - 2.7e-07 30.7 0.0 0.00041 20.5 0.0 2.4 2 0 0 2 2 2 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin TMEM131_like PF12371.8 RKO90462.1 - 0.0058 16.9 0.0 1.3 9.3 0.0 2.5 2 0 0 2 2 2 2 Transmembrane protein 131-like DUF2465 PF10239.9 RKO90468.1 - 0.065 12.5 0.4 0.095 11.9 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2465) Arf PF00025.21 RKO90469.1 - 2.1e-64 216.2 0.0 2.3e-64 216.1 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family G-alpha PF00503.20 RKO90469.1 - 4e-12 46.0 0.0 1e-08 34.8 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit SRPRB PF09439.10 RKO90469.1 - 1.7e-09 37.4 0.0 2.1e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 RKO90469.1 - 1.1e-07 32.0 0.0 1.8e-07 31.2 0.0 1.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase Roc PF08477.13 RKO90469.1 - 1.6e-07 31.6 0.0 3.7e-07 30.4 0.0 1.6 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 RKO90469.1 - 8.2e-07 28.8 0.0 1e-06 28.5 0.0 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 RKO90469.1 - 6.2e-06 25.7 0.0 7.1e-06 25.5 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 RKO90469.1 - 0.013 15.1 0.0 0.31 10.6 0.0 2.0 1 1 1 2 2 2 0 Elongation factor Tu GTP binding domain PduV-EutP PF10662.9 RKO90469.1 - 0.029 14.1 0.0 0.12 12.1 0.0 1.9 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation cobW PF02492.19 RKO90469.1 - 0.16 11.5 0.0 7.3 6.1 0.0 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain mRNA_decap_C PF16741.5 RKO90469.1 - 0.22 10.9 0.5 0.69 9.3 0.3 1.9 2 0 0 2 2 2 0 mRNA-decapping enzyme C-terminus SOG2 PF10428.9 RKO90473.1 - 7.2 5.7 9.7 9.5 5.3 9.7 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein peroxidase PF00141.23 RKO90474.1 - 9.3e-41 140.0 0.0 1.5e-40 139.4 0.0 1.3 1 0 0 1 1 1 1 Peroxidase DEAD PF00270.29 RKO90475.1 - 4.8e-46 156.7 0.0 8.5e-46 155.9 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO90475.1 - 3.8e-28 98.0 0.0 2.3e-27 95.5 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain GUCT PF08152.12 RKO90475.1 - 7.9e-24 83.8 0.0 1.9e-23 82.6 0.0 1.6 1 0 0 1 1 1 1 GUCT (NUC152) domain ResIII PF04851.15 RKO90475.1 - 2.1e-05 24.6 0.0 4e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 RKO90475.1 - 0.012 14.8 0.0 0.024 13.9 0.0 1.4 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase CMS1 PF14617.6 RKO90475.1 - 0.017 14.4 0.0 0.017 14.4 0.0 2.3 2 0 0 2 2 2 0 U3-containing 90S pre-ribosomal complex subunit GAT PF03127.14 RKO90476.1 - 4.6e-06 26.8 0.1 8.7e-06 26.0 0.1 1.5 1 0 0 1 1 1 1 GAT domain VHS PF00790.19 RKO90476.1 - 0.12 12.2 0.0 0.62 9.9 0.0 1.9 2 0 0 2 2 2 0 VHS domain EPL1 PF10513.9 RKO90477.1 - 3.8e-15 56.6 0.0 3.8e-15 56.6 0.0 4.1 5 0 0 5 5 5 1 Enhancer of polycomb-like CCDC85 PF10226.9 RKO90478.1 - 0.0016 18.1 0.3 0.0018 18.0 0.3 1.1 1 0 0 1 1 1 1 CCDC85 family Glyco_hydro_18 PF00704.28 RKO90479.1 - 3.2e-15 56.6 0.0 3.9e-15 56.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 DUF5639 PF18690.1 RKO90479.1 - 0.0094 16.1 0.0 0.25 11.5 0.0 2.3 2 0 0 2 2 2 1 Family of unknown function (DUF5639) FACT-Spt16_Nlob PF14826.6 RKO90481.1 - 9.3e-43 145.8 0.1 2.4e-42 144.5 0.1 1.7 1 0 0 1 1 1 1 FACT complex subunit SPT16 N-terminal lobe domain Peptidase_M24 PF00557.24 RKO90481.1 - 4.8e-29 101.5 0.0 6.6e-29 101.1 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Band_7 PF01145.25 RKO90482.1 - 1.8e-26 93.2 1.9 2.8e-26 92.6 1.9 1.3 1 0 0 1 1 1 1 SPFH domain / Band 7 family YdfA_immunity PF12127.8 RKO90482.1 - 0.001 18.2 3.0 0.0019 17.4 2.9 1.5 1 1 0 1 1 1 1 SigmaW regulon antibacterial UQ_con PF00179.26 RKO90483.1 - 1.4e-47 160.9 0.0 1.5e-47 160.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 RKO90483.1 - 0.00013 21.7 0.0 0.00016 21.4 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic E2 family B UEV PF05743.13 RKO90483.1 - 0.013 15.4 0.1 0.029 14.2 0.1 1.5 1 1 0 1 1 1 0 UEV domain RWD PF05773.22 RKO90483.1 - 0.083 13.2 0.3 0.15 12.4 0.3 1.5 1 1 0 1 1 1 0 RWD domain Asp PF00026.23 RKO90484.1 - 1.7e-54 185.4 10.5 2.3e-54 185.0 10.5 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO90484.1 - 0.0018 18.5 9.8 0.03 14.6 6.5 3.0 1 1 2 3 3 3 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 RKO90484.1 - 0.0052 16.6 0.0 0.016 15.0 0.0 1.8 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 RKO90484.1 - 0.16 12.6 2.8 1.8 9.2 0.2 2.8 2 1 0 2 2 2 0 Aspartyl protease PNRC PF15365.6 RKO90484.1 - 0.19 11.6 0.2 0.19 11.6 0.2 2.5 2 0 0 2 2 2 0 Proline-rich nuclear receptor coactivator motif Asp PF00026.23 RKO90486.1 - 0.048 13.1 0.2 0.068 12.6 0.2 1.2 1 0 0 1 1 1 0 Eukaryotic aspartyl protease Adaptin_N PF01602.20 RKO90489.1 - 2.1e-121 406.0 12.0 2.6e-121 405.8 12.0 1.1 1 0 0 1 1 1 1 Adaptin N terminal region COP-gamma_platf PF08752.10 RKO90489.1 - 1.9e-35 122.2 0.1 4.9e-35 120.9 0.1 1.7 1 0 0 1 1 1 1 Coatomer gamma subunit appendage platform subdomain HEAT_2 PF13646.6 RKO90489.1 - 9.3e-19 67.6 3.1 1e-08 35.4 0.1 5.5 4 2 1 5 5 5 3 HEAT repeats Cnd1 PF12717.7 RKO90489.1 - 5.1e-12 46.1 7.9 0.00014 21.9 0.2 4.0 2 1 0 3 3 3 3 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 RKO90489.1 - 0.0001 22.2 11.3 4.7 7.7 0.4 7.3 7 0 0 7 7 7 1 HEAT repeat HEAT_EZ PF13513.6 RKO90489.1 - 0.012 16.1 1.2 0.012 16.1 1.2 4.2 5 0 0 5 5 5 0 HEAT-like repeat HEAT_PBS PF03130.16 RKO90489.1 - 0.019 15.6 6.8 13 6.8 0.6 4.6 5 0 0 5 5 5 0 PBS lyase HEAT-like repeat Arm PF00514.23 RKO90489.1 - 0.037 14.1 0.3 2.1 8.5 0.0 3.8 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat DUF3385 PF11865.8 RKO90489.1 - 0.19 11.6 3.5 18 5.2 0.2 3.7 3 1 1 4 4 4 0 Domain of unknown function (DUF3385) Vac14_Fab1_bd PF12755.7 RKO90489.1 - 0.56 10.8 5.1 21 5.8 0.0 4.5 3 2 3 6 6 6 0 Vacuolar 14 Fab1-binding region COP-gamma_platf PF08752.10 RKO90490.1 - 2.2e-52 177.2 0.7 4.9e-52 176.1 0.3 1.8 2 0 0 2 2 2 1 Coatomer gamma subunit appendage platform subdomain Adaptin_N PF01602.20 RKO90490.1 - 2.6e-39 135.2 0.7 3.5e-39 134.8 0.7 1.2 1 0 0 1 1 1 1 Adaptin N terminal region Coatomer_g_Cpla PF16381.5 RKO90490.1 - 1e-34 119.1 0.0 1.8e-34 118.3 0.0 1.4 1 0 0 1 1 1 1 Coatomer subunit gamma-1 C-terminal appendage platform HEAT_2 PF13646.6 RKO90490.1 - 4.4e-09 36.6 0.2 1.3e-08 35.1 0.2 1.8 2 0 0 2 2 2 1 HEAT repeats HEAT_EZ PF13513.6 RKO90490.1 - 0.00089 19.7 0.9 0.0041 17.6 0.9 2.3 1 0 0 1 1 1 1 HEAT-like repeat Cnd1 PF12717.7 RKO90490.1 - 0.0048 17.0 0.5 0.016 15.3 0.1 2.0 2 0 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 Tra_M PF05261.11 RKO90490.1 - 0.068 13.2 0.7 2.7 8.0 0.0 2.7 3 0 0 3 3 3 0 TraM protein, DNA-binding HEAT PF02985.22 RKO90490.1 - 0.074 13.4 4.8 4.7 7.7 0.4 3.4 3 0 0 3 3 3 0 HEAT repeat SWIM PF04434.17 RKO90491.1 - 1.6e-06 27.7 0.0 3.1e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 SWIM zinc finger adh_short PF00106.25 RKO90492.1 - 1.7e-41 141.9 0.3 2.2e-41 141.5 0.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO90492.1 - 2.5e-24 86.1 0.4 3.6e-24 85.6 0.4 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 RKO90492.1 - 1.8e-06 28.0 0.2 4.2e-06 26.8 0.1 1.7 1 1 1 2 2 2 1 KR domain NAD_binding_10 PF13460.6 RKO90492.1 - 0.019 14.8 0.1 0.035 14.0 0.1 1.4 1 0 0 1 1 1 0 NAD(P)H-binding Sacchrp_dh_NADP PF03435.18 RKO90492.1 - 0.035 14.4 0.2 0.093 13.0 0.1 1.8 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain LSM PF01423.22 RKO90493.1 - 3.3e-10 39.5 0.1 4.2e-10 39.2 0.1 1.1 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 RKO90493.1 - 0.037 14.2 0.0 0.046 13.9 0.0 1.3 1 1 0 1 1 1 0 Ataxin 2 SM domain TAF1_subA PF14929.6 RKO90494.1 - 7.5e-20 71.7 0.0 1.1e-19 71.1 0.0 1.1 1 0 0 1 1 1 1 TAF RNA Polymerase I subunit A TPR_14 PF13428.6 RKO90494.1 - 0.025 15.4 0.7 15 6.7 0.0 4.1 3 1 0 3 3 3 0 Tetratricopeptide repeat F-box PF00646.33 RKO90496.1 - 0.013 15.4 0.4 0.035 14.0 0.4 1.7 1 0 0 1 1 1 0 F-box domain Cornifin PF02389.15 RKO90497.1 - 1.5 9.0 5.5 0.25 11.5 1.6 1.8 2 0 0 2 2 2 0 Cornifin (SPRR) family DEAD_2 PF06733.15 RKO90499.1 - 6.7e-43 146.3 0.0 1.1e-42 145.7 0.0 1.3 1 0 0 1 1 1 1 DEAD_2 Helicase_C_2 PF13307.6 RKO90499.1 - 6.1e-35 120.9 0.0 1.2e-34 120.0 0.0 1.4 1 0 0 1 1 1 1 Helicase C-terminal domain HBB PF06777.11 RKO90499.1 - 0.008 15.9 0.0 0.051 13.3 0.0 2.1 2 0 0 2 2 2 1 Helical and beta-bridge domain TetR_C_18 PF17923.1 RKO90502.1 - 0.1 13.1 0.4 5.1 7.7 0.1 2.5 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DUF4637 PF15470.6 RKO90505.1 - 0.42 10.3 6.4 0.6 9.8 6.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) AAA_16 PF13191.6 RKO90506.1 - 5.9e-31 108.1 0.0 1.4e-30 106.9 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain Pkinase PF00069.25 RKO90506.1 - 0.00031 20.2 0.0 0.00069 19.1 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain NACHT PF05729.12 RKO90506.1 - 0.0071 16.3 0.2 0.044 13.7 0.0 2.5 2 1 0 2 2 2 1 NACHT domain Pkinase_Tyr PF07714.17 RKO90506.1 - 0.047 13.0 0.0 0.082 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein tyrosine kinase DUF2791 PF10923.8 RKO90506.1 - 0.062 12.1 0.0 4.2 6.1 0.0 2.2 2 0 0 2 2 2 0 P-loop Domain of unknown function (DUF2791) PocR PF10114.9 RKO90506.1 - 0.084 12.6 0.0 9.6 6.0 0.0 2.6 2 0 0 2 2 2 0 Sensory domain found in PocR AAA_14 PF13173.6 RKO90506.1 - 0.17 11.9 0.0 17 5.5 0.0 2.5 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 RKO90506.1 - 0.21 10.7 0.2 0.67 9.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF815) Sel1 PF08238.12 RKO90507.1 - 5.4e-29 100.0 9.1 1.2e-07 32.1 0.0 6.6 7 0 0 7 7 7 5 Sel1 repeat ANAPC3 PF12895.7 RKO90507.1 - 9.7e-05 22.5 4.2 0.0017 18.5 0.9 3.2 3 0 0 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_1 PF00515.28 RKO90507.1 - 0.036 13.9 3.6 0.35 10.8 0.4 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_8 PF13181.6 RKO90507.1 - 0.076 13.3 5.1 2.4 8.6 0.3 4.6 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_6 PF13174.6 RKO90507.1 - 0.16 12.7 1.3 31 5.5 0.0 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_11 PF13414.6 RKO90507.1 - 0.3 10.8 5.2 15 5.3 0.1 4.0 4 0 0 4 4 4 0 TPR repeat TPR_2 PF07719.17 RKO90507.1 - 0.33 11.2 6.3 0.56 10.5 0.4 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO90507.1 - 2 9.1 11.5 0.3 11.8 0.7 3.4 4 0 0 4 4 4 0 Tetratricopeptide repeat LRR_9 PF14580.6 RKO90508.1 - 1.7e-24 86.2 3.4 1.2e-16 60.8 0.1 2.4 2 1 0 2 2 2 2 Leucine-rich repeat LRR_8 PF13855.6 RKO90508.1 - 2.5e-19 68.8 16.9 1e-08 34.8 0.4 4.4 3 1 1 4 4 4 4 Leucine rich repeat LRR_4 PF12799.7 RKO90508.1 - 3.6e-18 65.4 21.5 0.00072 19.9 0.6 5.4 4 1 2 6 6 6 5 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 RKO90508.1 - 0.0074 16.3 25.3 2.3 8.5 0.4 7.9 9 0 0 9 9 9 4 Leucine Rich repeat Glyco_transf_64 PF09258.10 RKO90509.1 - 7.5e-50 169.5 0.0 8.4e-50 169.3 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family 64 domain PC-Esterase PF13839.6 RKO90510.1 - 0.15 11.7 0.0 0.27 10.9 0.0 1.3 1 0 0 1 1 1 0 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Sterol_MT_C PF08498.10 RKO90511.1 - 1.9e-22 79.3 0.2 2.4e-22 79.0 0.2 1.1 1 0 0 1 1 1 1 Sterol methyltransferase C-terminal LRR_6 PF13516.6 RKO90512.1 - 0.068 13.2 0.5 17 5.8 0.1 3.5 3 0 0 3 3 3 0 Leucine Rich repeat ABC_membrane PF00664.23 RKO90517.1 - 7.1e-63 212.8 23.2 6.1e-35 121.2 10.6 2.5 2 1 0 2 2 2 2 ABC transporter transmembrane region ABC_tran PF00005.27 RKO90517.1 - 1.7e-44 151.6 0.0 7.4e-28 97.8 0.0 2.8 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 RKO90517.1 - 3.4e-08 33.2 0.0 0.012 15.1 0.0 3.8 2 2 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 RKO90517.1 - 9.1e-06 25.3 1.5 0.025 14.3 0.1 2.9 3 0 0 3 3 2 2 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 RKO90517.1 - 7.5e-05 22.8 1.0 0.31 11.1 0.0 2.6 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_16 PF13191.6 RKO90517.1 - 0.00013 22.4 1.3 0.46 10.8 0.0 2.8 2 1 0 2 2 2 2 AAA ATPase domain AAA_21 PF13304.6 RKO90517.1 - 0.00043 20.2 0.3 4.1 7.1 0.0 3.4 3 0 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system T2SSE PF00437.20 RKO90517.1 - 0.0019 17.3 0.1 0.46 9.5 0.1 2.5 2 0 0 2 2 2 1 Type II/IV secretion system protein RsgA_GTPase PF03193.16 RKO90517.1 - 0.0024 17.8 0.1 0.66 9.9 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase AAA_23 PF13476.6 RKO90517.1 - 0.0028 18.2 0.8 0.27 11.7 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 RKO90517.1 - 0.0028 17.2 0.2 0.22 11.1 0.1 2.5 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 RKO90517.1 - 0.0083 16.4 1.6 11 6.3 0.1 3.4 3 0 0 3 3 3 0 AAA domain Zeta_toxin PF06414.12 RKO90517.1 - 0.027 13.8 3.3 0.57 9.4 0.2 2.6 3 0 0 3 3 3 0 Zeta toxin FtsK_SpoIIIE PF01580.18 RKO90517.1 - 0.037 13.4 0.5 1.2 8.5 0.2 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_24 PF13479.6 RKO90517.1 - 0.04 13.6 0.4 0.25 11.0 0.1 2.3 2 1 0 2 2 2 0 AAA domain DUF87 PF01935.17 RKO90517.1 - 0.048 13.7 3.8 3.9 7.5 0.2 2.4 2 0 0 2 2 2 0 Helicase HerA, central domain Dynamin_N PF00350.23 RKO90517.1 - 0.054 13.6 0.5 2.2 8.3 0.0 2.4 2 0 0 2 2 2 0 Dynamin family BCA_ABC_TP_C PF12399.8 RKO90517.1 - 0.13 12.2 0.2 0.27 11.2 0.2 1.6 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter Viral_helicase1 PF01443.18 RKO90517.1 - 0.19 11.4 0.1 0.86 9.3 0.0 2.0 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA PF00004.29 RKO90517.1 - 0.22 11.9 0.4 29 5.1 0.0 3.0 3 0 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 RKO90517.1 - 0.24 11.7 0.8 12 6.2 0.0 3.7 3 1 0 3 3 3 0 Putative exonuclease SbcCD, C subunit ATP_bind_1 PF03029.17 RKO90517.1 - 0.34 10.7 0.9 28 4.4 0.0 3.1 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein DUF2075 PF09848.9 RKO90517.1 - 2.4 7.3 3.2 2.4 7.3 0.0 2.2 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2075) Semialdhyde_dhC PF02774.18 RKO90519.1 - 3.7e-39 134.7 0.0 5.3e-39 134.2 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 RKO90519.1 - 4.7e-28 98.1 0.0 7.8e-28 97.4 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.20 RKO90519.1 - 0.018 15.2 0.0 0.033 14.3 0.0 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Sacchrp_dh_NADP PF03435.18 RKO90519.1 - 0.021 15.1 0.0 0.036 14.3 0.0 1.5 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DXP_reductoisom PF02670.16 RKO90519.1 - 0.059 14.1 0.1 0.27 12.0 0.0 2.1 2 0 0 2 2 2 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase zf-HC5HC2H_2 PF13832.6 RKO90520.1 - 2.1e-31 108.3 11.0 2.1e-31 108.3 5.0 2.2 2 0 0 2 2 2 1 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 RKO90520.1 - 1.7e-25 89.1 2.6 1.7e-25 89.1 2.6 2.9 3 0 0 3 3 3 2 PHD-like zinc-binding domain PHD_2 PF13831.6 RKO90520.1 - 2.4e-15 55.8 2.2 2.4e-15 55.8 2.2 3.1 3 0 0 3 3 3 2 PHD-finger EPL1 PF10513.9 RKO90520.1 - 4.9e-12 46.5 7.5 7e-12 46.0 7.5 1.2 1 0 0 1 1 1 1 Enhancer of polycomb-like PHD PF00628.29 RKO90520.1 - 1.1e-11 44.4 20.5 1.9e-11 43.7 5.1 3.1 3 0 0 3 3 3 2 PHD-finger C1_1 PF00130.22 RKO90520.1 - 0.0014 18.4 0.2 0.0014 18.4 0.2 3.1 3 0 0 3 3 3 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-PHD-like PF15446.6 RKO90520.1 - 0.0019 17.8 2.7 0.0019 17.8 2.7 2.3 2 0 0 2 2 2 1 PHD/FYVE-zinc-finger like domain FYVE_2 PF02318.16 RKO90520.1 - 0.0092 16.2 0.1 0.0092 16.2 0.1 2.1 2 0 0 2 2 2 1 FYVE-type zinc finger Prok-RING_1 PF14446.6 RKO90520.1 - 0.025 14.5 3.4 0.025 14.5 3.4 2.9 2 1 0 2 2 2 0 Prokaryotic RING finger family 1 zf-UDP PF14569.6 RKO90520.1 - 0.38 10.9 13.1 0.58 10.3 3.4 2.4 2 0 0 2 2 2 0 Zinc-binding RING-finger zf-RING-like PF08746.11 RKO90520.1 - 1.6 9.1 21.0 1.2 9.5 7.2 2.8 3 0 0 3 3 2 0 RING-like domain zf-RING_2 PF13639.6 RKO90520.1 - 1.7 9.1 22.7 1.6 9.1 5.5 2.9 2 1 0 2 2 2 0 Ring finger domain Bromodomain PF00439.25 RKO90521.1 - 4.9e-22 77.8 0.6 5.3e-22 77.7 0.6 1.0 1 0 0 1 1 1 1 Bromodomain Synapsin PF02078.16 RKO90521.1 - 0.047 14.0 0.0 0.055 13.7 0.0 1.0 1 0 0 1 1 1 0 Synapsin, N-terminal domain Nop16 PF09420.10 RKO90522.1 - 1.2e-34 120.2 0.5 1.6e-32 113.3 0.5 2.0 1 1 0 1 1 1 1 Ribosome biogenesis protein Nop16 Pribosyltran PF00156.27 RKO90523.1 - 1.2e-23 83.4 0.0 1.5e-23 83.1 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 RKO90523.1 - 0.00094 18.7 0.0 0.0012 18.3 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 RKO90523.1 - 0.0025 17.4 0.0 0.006 16.1 0.0 1.6 2 0 0 2 2 2 1 Phosphoribosyl transferase G_glu_transpept PF01019.21 RKO90524.1 - 1.6e-143 479.2 0.0 1.8e-143 479.0 0.0 1.0 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase Rhodanese PF00581.20 RKO90525.1 - 4.9e-09 36.7 0.0 5.8e-09 36.4 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain SH3_9 PF14604.6 RKO90529.1 - 5.7e-07 29.3 0.0 1.2e-06 28.3 0.0 1.6 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO90529.1 - 8.7e-05 22.1 0.0 0.00021 20.8 0.0 1.7 1 0 0 1 1 1 1 SH3 domain TMEM51 PF15345.6 RKO90529.1 - 0.0036 17.2 0.0 0.0063 16.4 0.0 1.3 1 0 0 1 1 1 1 Transmembrane protein 51 Protocadherin PF08374.11 RKO90529.1 - 0.013 15.5 0.0 0.028 14.4 0.0 1.5 1 0 0 1 1 1 0 Protocadherin Kelch_3 PF13415.6 RKO90529.1 - 0.021 15.1 2.8 1.8 8.9 0.1 2.7 2 0 0 2 2 2 0 Galactose oxidase, central domain SH3_2 PF07653.17 RKO90529.1 - 0.03 14.0 0.0 0.057 13.1 0.0 1.5 1 0 0 1 1 1 0 Variant SH3 domain Pheromone PF08015.11 RKO90530.1 - 4.3 8.4 7.7 0.72 10.9 0.4 2.3 1 1 1 2 2 2 0 Fungal mating-type pheromone Bac_globin PF01152.21 RKO90531.1 - 0.12 12.5 0.3 0.2 11.8 0.3 1.3 1 0 0 1 1 1 0 Bacterial-like globin CHZ PF09649.10 RKO90532.1 - 2.8e-06 26.7 0.1 2.8e-06 26.7 0.1 2.5 2 0 0 2 2 2 1 Histone chaperone domain CHZ SDA1 PF05285.12 RKO90532.1 - 0.82 9.0 7.9 1.2 8.5 7.9 1.2 1 0 0 1 1 1 0 SDA1 BUD22 PF09073.10 RKO90532.1 - 4.1 6.6 8.6 5.7 6.2 8.6 1.1 1 0 0 1 1 1 0 BUD22 RXT2_N PF08595.11 RKO90532.1 - 8.3 6.4 7.2 16 5.5 7.2 1.4 1 0 0 1 1 1 0 RXT2-like, N-terminal Acetyltransf_13 PF13880.6 RKO90533.1 - 1.3e-28 98.7 0.0 2.2e-28 98.0 0.0 1.4 1 0 0 1 1 1 1 ESCO1/2 acetyl-transferase zf-C2H2_3 PF13878.6 RKO90533.1 - 2.7e-14 52.7 0.2 6.9e-14 51.4 0.2 1.7 1 0 0 1 1 1 1 zinc-finger of acetyl-transferase ESCO Acetyltransf_1 PF00583.25 RKO90533.1 - 0.042 14.1 0.0 0.074 13.3 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 RKO90533.1 - 0.055 13.9 0.0 0.13 12.8 0.0 1.6 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain FHA PF00498.26 RKO90536.1 - 0.17 12.3 0.1 0.48 10.8 0.0 1.9 2 0 0 2 2 2 0 FHA domain SHQ1 PF04925.15 RKO90537.1 - 2.1e-66 222.8 0.5 3e-66 222.3 0.5 1.1 1 0 0 1 1 1 1 SHQ1 protein RRP7 PF12923.7 RKO90539.1 - 9.5e-18 64.5 0.1 1.6e-17 63.8 0.1 1.3 1 0 0 1 1 1 1 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain RRM_Rrp7 PF17799.1 RKO90539.1 - 9.6e-06 25.5 0.0 1.9e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Rrp7 RRM-like N-terminal domain RRM_1 PF00076.22 RKO90539.1 - 0.013 15.4 0.0 0.026 14.3 0.0 1.5 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RT_RNaseH PF17917.1 RKO90541.1 - 5.1e-11 42.8 0.0 6.4e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase RT_RNaseH_2 PF17919.1 RKO90541.1 - 5.3e-06 26.4 0.0 1.1e-05 25.4 0.0 1.5 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase Homeodomain PF00046.29 RKO90542.1 - 2.4e-16 59.3 0.4 2.9e-16 59.1 0.4 1.1 1 0 0 1 1 1 1 Homeodomain Homeobox_KN PF05920.11 RKO90542.1 - 0.00027 20.8 0.3 0.0004 20.2 0.3 1.3 1 0 0 1 1 1 1 Homeobox KN domain YdaS_antitoxin PF15943.5 RKO90542.1 - 0.044 13.7 0.0 0.06 13.2 0.0 1.2 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT dCache_1 PF02743.18 RKO90543.1 - 0.0082 16.0 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 Cache domain RRM_1 PF00076.22 RKO90546.1 - 7.4e-19 67.3 0.0 1.1e-18 66.8 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Polyoma_agno PF01736.16 RKO90546.1 - 0.093 12.5 0.0 0.29 10.9 0.0 1.8 1 0 0 1 1 1 0 Polyomavirus agnoprotein SSP160 PF06933.11 RKO90548.1 - 0.035 12.3 11.4 0.037 12.3 11.4 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 CW_7 PF08230.11 RKO90548.1 - 0.18 11.6 0.4 0.28 11.0 0.4 1.3 1 0 0 1 1 1 0 CW_7 repeat PDDEXK_3 PF13366.6 RKO90549.1 - 0.013 15.9 0.0 0.019 15.3 0.0 1.2 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily Capsid_N PF16903.5 RKO90550.1 - 1e-51 175.5 0.0 1.5e-51 175.0 0.0 1.2 1 0 0 1 1 1 1 Major capsid protein N-terminus Capsid_NCLDV PF04451.12 RKO90550.1 - 1.2e-38 132.9 4.6 8.4e-24 84.4 0.7 2.4 1 1 1 2 2 2 2 Large eukaryotic DNA virus major capsid protein Ribonuclease_T2 PF00445.18 RKO90551.1 - 2.6e-29 102.8 0.1 3.3e-29 102.4 0.1 1.1 1 0 0 1 1 1 1 Ribonuclease T2 family TPR_1 PF00515.28 RKO90552.1 - 7.1e-25 85.8 16.1 0.00063 19.5 0.2 6.4 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_2 PF07719.17 RKO90552.1 - 1.9e-16 58.8 17.9 0.0011 18.9 0.2 6.8 7 0 0 7 7 6 5 Tetratricopeptide repeat STI1 PF17830.1 RKO90552.1 - 5.3e-16 58.3 2.5 8.4e-16 57.7 1.7 1.8 2 0 0 2 2 2 1 STI1 domain TPR_11 PF13414.6 RKO90552.1 - 3.3e-10 39.5 10.0 0.00036 20.2 0.3 5.4 5 1 1 6 6 6 2 TPR repeat TPR_12 PF13424.6 RKO90552.1 - 5.2e-09 36.3 10.0 1.6e-05 25.1 0.4 4.9 2 2 3 5 5 5 2 Tetratricopeptide repeat TPR_14 PF13428.6 RKO90552.1 - 1.7e-07 31.5 6.9 2.6 9.1 0.0 6.3 4 3 3 7 7 6 1 Tetratricopeptide repeat TPR_8 PF13181.6 RKO90552.1 - 2.2e-07 30.5 18.1 0.081 13.2 0.7 6.5 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_19 PF14559.6 RKO90552.1 - 2.9e-07 30.9 11.6 0.00013 22.4 0.3 4.6 3 1 2 5 5 5 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO90552.1 - 3e-05 24.6 10.3 0.065 13.9 0.0 4.3 4 2 1 5 5 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 RKO90552.1 - 0.00036 20.3 4.0 0.061 13.2 0.0 4.0 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_17 PF13431.6 RKO90552.1 - 0.003 17.8 3.4 12 6.6 0.1 4.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_7 PF13176.6 RKO90552.1 - 0.012 15.6 1.8 25 5.2 0.0 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO90552.1 - 0.016 15.4 7.1 0.033 14.4 0.6 2.9 2 1 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 Trypan_PARP PF05887.11 RKO90552.1 - 0.53 10.3 10.6 1.1 9.3 10.6 1.5 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) TPR_1 PF00515.28 RKO90553.1 - 4.5e-22 76.9 0.5 4.9e-07 29.3 0.0 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 RKO90553.1 - 2e-20 71.2 0.6 5.3e-06 26.1 0.0 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 RKO90553.1 - 2.8e-14 52.5 4.6 8.7e-07 28.5 0.0 3.5 1 1 2 3 3 3 3 TPR repeat TPR_8 PF13181.6 RKO90553.1 - 2.9e-13 48.9 1.7 0.00048 20.1 0.1 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.6 RKO90553.1 - 3e-10 40.0 0.4 0.0026 18.5 0.0 2.9 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 RKO90553.1 - 2e-08 34.1 1.0 0.0026 18.0 0.1 4.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO90553.1 - 3.6e-08 33.9 2.9 9.1e-05 23.0 0.0 2.3 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO90553.1 - 8.3e-07 29.4 0.5 0.038 14.5 0.0 2.4 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 RKO90553.1 - 1.6e-06 28.3 1.6 0.012 15.9 0.0 2.5 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.6 RKO90553.1 - 8.7e-06 25.8 0.0 0.0041 17.2 0.2 2.2 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 RKO90553.1 - 1.2e-05 25.0 0.3 0.022 14.8 0.0 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_10 PF13374.6 RKO90553.1 - 7.8e-05 22.4 0.4 0.33 10.9 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_21 PF09976.9 RKO90553.1 - 0.00066 19.4 1.9 0.00093 19.0 1.9 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat-like domain STI1 PF17830.1 RKO90553.1 - 0.0022 17.9 0.0 0.0035 17.2 0.0 1.4 1 0 0 1 1 1 1 STI1 domain TPR_6 PF13174.6 RKO90553.1 - 0.006 17.2 0.6 7.5 7.4 0.0 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 RKO90553.1 - 0.019 15.0 0.0 19 5.4 0.0 3.2 3 0 0 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat ANAPC3 PF12895.7 RKO90553.1 - 0.026 14.8 0.1 0.049 13.9 0.1 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_3 PF07720.12 RKO90553.1 - 0.031 14.3 7.2 2.2 8.4 0.0 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_20 PF14561.6 RKO90553.1 - 0.046 14.1 0.2 0.093 13.1 0.2 1.5 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_4 PF07721.14 RKO90553.1 - 0.047 14.3 0.5 0.48 11.2 1.4 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat NARP1 PF12569.8 RKO90553.1 - 0.058 12.3 0.2 0.16 10.9 0.3 1.5 1 1 1 2 2 2 0 NMDA receptor-regulated protein 1 DUF3808 PF10300.9 RKO90553.1 - 0.11 11.3 0.0 0.13 11.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3808) Oxidored_FMN PF00724.20 RKO90555.1 - 8.4e-55 186.4 0.0 1.7e-52 178.8 0.0 2.1 1 1 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family HSP20 PF00011.21 RKO90556.1 - 3.6e-20 72.0 1.2 4.7e-20 71.6 1.2 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 RKO90556.1 - 5.9e-10 38.6 0.1 9.9e-10 37.8 0.1 1.4 1 0 0 1 1 1 1 HSP20-like domain found in ArsA GvpH PF05455.11 RKO90556.1 - 0.0052 16.9 0.7 0.008 16.3 0.3 1.5 2 0 0 2 2 2 1 GvpH FKBP26_C PF18046.1 RKO90556.1 - 0.014 15.5 0.7 0.24 11.5 0.0 2.2 2 0 0 2 2 2 0 FKBP26_C-terminal NT-C2 PF10358.9 RKO90556.1 - 0.15 11.8 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 N-terminal C2 in EEIG1 and EHBP1 proteins FAD-oxidase_C PF02913.19 RKO90558.1 - 2.5e-65 220.6 0.0 3.8e-65 220.0 0.0 1.3 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 RKO90558.1 - 1.4e-35 122.0 2.1 3.4e-35 120.8 1.8 1.9 2 0 0 2 2 2 1 FAD binding domain CPSase_L_D2 PF02786.17 RKO90559.1 - 2.5e-74 249.4 0.0 4.3e-74 248.6 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 RKO90559.1 - 1.5e-48 163.9 0.6 1e-46 158.0 0.2 2.4 2 0 0 2 2 2 1 Biotin carboxylase, N-terminal domain Dala_Dala_lig_C PF07478.13 RKO90559.1 - 5.3e-11 42.4 0.1 1.6e-10 40.9 0.1 1.7 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 RKO90559.1 - 1.1e-09 38.2 0.3 2.4e-09 37.0 0.1 1.6 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp_3 PF02655.14 RKO90559.1 - 1.7e-05 24.9 0.0 2.6e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain RimK PF08443.11 RKO90559.1 - 0.00064 19.4 0.0 0.0057 16.3 0.0 2.0 1 1 0 1 1 1 1 RimK-like ATP-grasp domain Ntox43 PF15537.6 RKO90559.1 - 0.0043 17.1 0.1 0.016 15.2 0.0 1.9 2 0 0 2 2 2 1 Bacterial toxin 43 ATPgrasp_ST PF14397.6 RKO90559.1 - 0.0063 15.8 0.2 0.013 14.7 0.1 1.5 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp GARS_A PF01071.19 RKO90559.1 - 0.0072 16.1 0.1 0.013 15.3 0.1 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_4 PF13535.6 RKO90559.1 - 0.012 15.2 0.0 0.038 13.6 0.0 1.8 2 0 0 2 2 2 0 ATP-grasp domain ATPgrasp_N PF18130.1 RKO90559.1 - 0.17 12.5 0.6 1.1 9.9 0.1 2.4 2 1 0 2 2 2 0 ATP-grasp N-terminal domain Bromodomain PF00439.25 RKO90560.1 - 6.6e-20 71.0 0.0 8.5e-20 70.6 0.0 1.2 1 0 0 1 1 1 1 Bromodomain FOP_dimer PF09398.10 RKO90561.1 - 1.3e-10 41.4 0.0 2e-10 40.8 0.0 1.3 1 0 0 1 1 1 1 FOP N terminal dimerisation domain LisH_2 PF16045.5 RKO90561.1 - 2e-05 23.5 0.1 4.5e-05 22.4 0.1 1.6 1 0 0 1 1 1 1 LisH DPPIV_N PF00930.21 RKO90562.1 - 0.00058 18.7 0.0 0.00073 18.4 0.0 1.1 1 0 0 1 1 1 1 Dipeptidyl peptidase IV (DPP IV) N-terminal region Ank_2 PF12796.7 RKO90563.1 - 8.8e-18 64.7 0.0 8.3e-05 23.1 0.0 4.0 2 2 1 4 4 4 4 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO90563.1 - 3.1e-14 52.8 1.7 0.0099 16.2 0.1 5.8 2 1 3 5 5 5 5 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO90563.1 - 4.4e-14 52.6 0.0 0.00085 19.8 0.0 4.3 3 2 0 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 RKO90563.1 - 1.1e-12 47.7 0.2 0.0002 21.7 0.4 5.5 5 0 0 5 5 5 3 Ankyrin repeat Ank_3 PF13606.6 RKO90563.1 - 6.9e-11 41.4 0.1 0.015 15.7 0.1 5.7 6 0 0 6 6 6 2 Ankyrin repeat RasGEF PF00617.19 RKO90563.1 - 1e-05 25.8 0.0 2.4e-05 24.6 0.0 1.7 2 0 0 2 2 2 1 RasGEF domain NMT_C PF02799.15 RKO90564.1 - 5.1e-82 274.5 0.0 7.7e-82 273.9 0.0 1.2 1 0 0 1 1 1 1 Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain NMT PF01233.19 RKO90564.1 - 1.4e-73 246.0 0.0 2.8e-73 245.1 0.0 1.5 1 0 0 1 1 1 1 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain Acetyltransf_1 PF00583.25 RKO90564.1 - 0.0067 16.7 0.0 0.013 15.8 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Glyoxal_oxid_N PF07250.11 RKO90566.1 - 1.9e-10 40.3 0.0 4.1e-10 39.3 0.0 1.5 2 0 0 2 2 2 1 Glyoxal oxidase N-terminus Herpes_UL43 PF05072.13 RKO90568.1 - 0.14 11.3 0.0 0.17 10.9 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus UL43 protein GST_N_3 PF13417.6 RKO90569.1 - 0.0069 16.8 0.0 0.015 15.7 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 RKO90569.1 - 0.0073 16.6 0.0 0.017 15.4 0.0 1.7 1 1 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 RKO90569.1 - 0.06 13.7 0.0 0.11 12.9 0.0 1.4 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Hexapep PF00132.24 RKO90570.1 - 3.1e-08 33.0 8.3 0.0027 17.4 0.2 6.2 6 0 0 6 6 6 3 Bacterial transferase hexapeptide (six repeats) Sel1 PF08238.12 RKO90572.1 - 1.6e-12 47.7 14.8 0.0011 19.6 0.0 6.1 6 0 0 6 6 6 5 Sel1 repeat SNF2_N PF00176.23 RKO90574.1 - 3.4e-09 35.9 0.1 6.4e-09 35.0 0.0 1.5 2 0 0 2 2 2 1 SNF2 family N-terminal domain Forkhead PF00250.18 RKO90575.1 - 1.3e-15 57.4 0.1 4.8e-15 55.6 0.1 1.8 1 1 0 1 1 1 1 Forkhead domain DUF5323 PF17257.2 RKO90575.1 - 0.093 12.6 0.9 0.25 11.2 0.9 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5323) Sporozoite_P67 PF05642.11 RKO90575.1 - 0.27 9.3 2.9 0.35 8.9 2.9 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen SDA1 PF05285.12 RKO90575.1 - 0.32 10.4 13.1 0.45 9.9 13.1 1.1 1 0 0 1 1 1 0 SDA1 CDC45 PF02724.14 RKO90575.1 - 0.71 8.1 8.6 0.92 7.7 8.6 1.2 1 0 0 1 1 1 0 CDC45-like protein Nop14 PF04147.12 RKO90575.1 - 1.5 7.0 15.1 1.9 6.6 15.1 1.0 1 0 0 1 1 1 0 Nop14-like family COPI_C PF06957.11 RKO90575.1 - 2.2 6.9 12.3 3.5 6.3 12.3 1.2 1 0 0 1 1 1 0 Coatomer (COPI) alpha subunit C-terminus DUF2457 PF10446.9 RKO90575.1 - 2.2 7.3 19.9 3.2 6.8 19.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) BUD22 PF09073.10 RKO90575.1 - 6.3 6.0 13.8 11 5.2 13.8 1.3 1 0 0 1 1 1 0 BUD22 MAM33 PF02330.16 RKO90577.1 - 1.7e-52 178.5 1.3 2.2e-52 178.1 1.3 1.2 1 0 0 1 1 1 1 Mitochondrial glycoprotein Histone PF00125.24 RKO90579.1 - 2.5e-23 82.9 0.2 2.9e-23 82.6 0.2 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 RKO90579.1 - 3.2e-07 30.5 0.0 3.2e-07 30.5 0.0 1.8 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID_20kDa PF03847.13 RKO90579.1 - 0.00061 20.2 0.0 0.0011 19.5 0.0 1.3 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A YscO-like PF16789.5 RKO90579.1 - 0.0072 16.4 0.1 0.0084 16.2 0.1 1.1 1 0 0 1 1 1 1 YscO-like protein NMT_C PF02799.15 RKO90580.1 - 4.1e-76 255.1 0.0 6e-76 254.6 0.0 1.2 1 0 0 1 1 1 1 Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain NMT PF01233.19 RKO90580.1 - 2.4e-72 242.0 0.0 8.3e-72 240.2 0.0 1.8 2 0 0 2 2 2 1 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain Acetyltransf_1 PF00583.25 RKO90580.1 - 0.00029 21.1 0.0 0.00051 20.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Chorein_N PF12624.7 RKO90581.1 - 2.1e-19 69.8 0.0 4.1e-19 68.8 0.0 1.4 1 0 0 1 1 1 1 N-terminal region of Chorein or VPS13 SR-25 PF10500.9 RKO90582.1 - 1.2e-22 80.6 91.9 1.2e-19 70.8 0.2 2.8 2 1 1 3 3 3 2 Nuclear RNA-splicing-associated protein THRAP3_BCLAF1 PF15440.6 RKO90582.1 - 1.2e-05 24.6 34.9 1.2e-05 24.6 34.9 3.0 2 1 1 3 3 3 1 THRAP3/BCLAF1 family Macoilin PF09726.9 RKO90582.1 - 0.51 8.8 29.0 0.67 8.4 29.0 1.1 1 0 0 1 1 1 0 Macoilin family SOG2 PF10428.9 RKO90582.1 - 0.97 8.6 30.1 1.2 8.2 30.1 1.3 1 0 0 1 1 1 0 RAM signalling pathway protein HSP90 PF00183.18 RKO90583.1 - 1.5e-10 40.7 0.0 1.6e-10 40.5 0.0 1.1 1 0 0 1 1 1 1 Hsp90 protein zf-C3HC4_3 PF13920.6 RKO90584.1 - 1.9e-09 37.3 7.8 4.6e-09 36.0 7.8 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 RKO90584.1 - 2.6e-07 30.4 11.0 5.7e-07 29.3 11.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 RKO90584.1 - 1.2e-06 28.7 10.1 1.2e-06 28.7 10.1 1.8 2 0 0 2 2 1 1 Ring finger domain Prok-RING_4 PF14447.6 RKO90584.1 - 3.6e-06 26.7 9.3 6.4e-06 25.9 9.3 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 RKO90584.1 - 3.6e-06 26.9 5.5 3.6e-06 26.9 5.5 2.4 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 RKO90584.1 - 1.8e-05 24.5 10.5 1.8e-05 24.5 10.5 1.8 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) Csm1_N PF18504.1 RKO90584.1 - 6e-05 23.3 6.9 0.067 13.5 0.0 3.1 3 0 0 3 3 3 2 Csm1 N-terminal domain zf-RING_5 PF14634.6 RKO90584.1 - 0.0011 18.9 8.2 0.0028 17.6 8.2 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-rbx1 PF12678.7 RKO90584.1 - 0.0078 16.5 6.6 0.0078 16.5 6.6 2.3 2 0 0 2 2 2 1 RING-H2 zinc finger domain bZIP_1 PF00170.21 RKO90584.1 - 0.011 15.9 5.4 3.2 7.9 0.1 3.2 3 0 0 3 3 3 0 bZIP transcription factor zf-P11 PF03854.14 RKO90584.1 - 0.02 14.5 5.8 0.036 13.7 5.8 1.4 1 0 0 1 1 1 0 P-11 zinc finger Sec2p PF06428.11 RKO90584.1 - 0.025 14.5 2.1 5 7.2 0.1 2.5 2 0 0 2 2 2 0 GDP/GTP exchange factor Sec2p Jnk-SapK_ap_N PF09744.9 RKO90584.1 - 0.036 14.3 7.5 0.68 10.2 0.2 3.0 3 0 0 3 3 3 0 JNK_SAPK-associated protein-1 SlyX PF04102.12 RKO90584.1 - 0.047 14.3 8.3 0.15 12.7 0.1 3.4 3 1 0 3 3 3 0 SlyX ZapB PF06005.12 RKO90584.1 - 0.05 14.1 6.0 5.8 7.4 0.2 3.2 3 0 0 3 3 3 0 Cell division protein ZapB ABC_tran_CTD PF16326.5 RKO90584.1 - 0.058 13.7 2.6 4.4 7.6 0.2 2.6 2 0 0 2 2 2 0 ABC transporter C-terminal domain DUF4200 PF13863.6 RKO90584.1 - 0.086 13.2 8.5 2.6 8.5 0.5 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4200) TMF_DNA_bd PF12329.8 RKO90584.1 - 0.13 12.3 2.8 11 6.1 0.1 2.7 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding MCC-bdg_PDZ PF10506.9 RKO90584.1 - 0.13 12.3 0.2 0.13 12.3 0.2 2.6 4 0 0 4 4 3 0 PDZ domain of MCC-2 bdg protein for Usher syndrome ADIP PF11559.8 RKO90584.1 - 0.15 12.2 4.5 1.2 9.2 0.1 2.9 3 0 0 3 3 3 0 Afadin- and alpha -actinin-Binding zf-RING_10 PF16685.5 RKO90584.1 - 0.15 12.2 8.7 0.43 10.8 8.7 1.7 1 0 0 1 1 1 0 zinc RING finger of MSL2 BRE1 PF08647.11 RKO90584.1 - 0.25 11.4 4.3 2.5 8.2 0.2 2.8 3 0 0 3 3 3 0 BRE1 E3 ubiquitin ligase DUF5082 PF16888.5 RKO90584.1 - 0.29 11.4 6.3 0.22 11.8 0.4 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) Troponin PF00992.20 RKO90584.1 - 0.41 10.9 12.7 0.51 10.6 3.2 2.9 2 1 1 3 3 3 0 Troponin Tropomyosin_1 PF12718.7 RKO90584.1 - 0.52 10.5 7.9 5.9 7.0 0.6 2.9 3 0 0 3 3 3 0 Tropomyosin like zf-C3HC4_4 PF15227.6 RKO90584.1 - 0.53 10.5 16.6 0.07 13.3 10.8 2.4 3 0 0 3 3 2 0 zinc finger of C3HC4-type, RING Uso1_p115_C PF04871.13 RKO90584.1 - 0.62 10.4 5.5 2 8.8 0.9 2.7 2 1 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Cep57_MT_bd PF06657.13 RKO90584.1 - 0.85 10.1 7.2 8 7.0 0.6 3.1 3 0 0 3 3 3 0 Centrosome microtubule-binding domain of Cep57 Prefoldin_2 PF01920.20 RKO90584.1 - 0.88 9.6 6.2 0.6 10.1 0.6 2.7 3 0 0 3 3 3 0 Prefoldin subunit TSC22 PF01166.18 RKO90584.1 - 0.91 9.9 8.6 11 6.4 0.0 3.3 3 0 0 3 3 3 0 TSC-22/dip/bun family JIP_LZII PF16471.5 RKO90584.1 - 1.2 9.3 11.2 2.1 8.5 0.3 3.3 3 0 0 3 3 3 0 JNK-interacting protein leucine zipper II GAS PF13851.6 RKO90584.1 - 1.7 8.0 9.2 5.2 6.4 0.1 2.9 2 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding Ax_dynein_light PF10211.9 RKO90584.1 - 1.9 8.4 8.9 0.22 11.4 0.5 2.9 3 0 0 3 3 3 0 Axonemal dynein light chain Spc24 PF08286.11 RKO90584.1 - 2 8.7 6.1 1.9 8.8 1.0 2.7 2 1 1 3 3 3 0 Spc24 subunit of Ndc80 DUF4140 PF13600.6 RKO90584.1 - 2 8.9 7.9 36 4.9 0.4 3.1 2 1 1 3 3 3 0 N-terminal domain of unknown function (DUF4140) zf-RING_4 PF14570.6 RKO90584.1 - 2.3 8.1 7.5 7.7 6.4 7.5 1.9 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain ECM11 PF15463.6 RKO90584.1 - 5.2 7.7 6.7 36 4.9 0.2 2.4 2 0 0 2 2 2 0 Extracellular mutant protein 11 Mit_KHE1 PF10173.9 RKO90585.1 - 1.2e-34 120.1 0.0 1.5e-34 119.7 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial K+-H+ exchange-related F-box-like PF12937.7 RKO90587.1 - 1.5e-08 34.4 1.5 3.3e-08 33.3 1.5 1.7 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO90587.1 - 9.3e-07 28.6 0.5 3.1e-06 26.9 0.5 1.9 1 0 0 1 1 1 1 F-box domain ABC_tran PF00005.27 RKO90588.1 - 6.8e-13 49.3 0.0 2.2e-12 47.6 0.0 1.8 1 1 0 1 1 1 1 ABC transporter SMC_N PF02463.19 RKO90588.1 - 1e-06 28.4 1.5 0.0022 17.5 0.0 3.2 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 RKO90588.1 - 0.00066 19.6 0.3 0.11 12.3 0.1 2.6 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system ATPase PF06745.13 RKO90588.1 - 0.0017 17.7 0.1 0.0036 16.7 0.1 1.5 1 0 0 1 1 1 1 KaiC AAA_16 PF13191.6 RKO90588.1 - 0.0031 17.9 0.0 0.0051 17.2 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain TsaE PF02367.17 RKO90588.1 - 0.0038 17.2 0.0 0.0077 16.2 0.0 1.5 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_22 PF13401.6 RKO90588.1 - 0.0047 17.2 0.0 0.0096 16.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 RKO90588.1 - 0.0064 16.0 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA PF00004.29 RKO90588.1 - 0.0077 16.7 0.0 0.016 15.6 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 RKO90588.1 - 0.008 16.7 1.2 0.0098 16.4 1.2 1.5 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 RKO90588.1 - 0.011 15.5 0.4 0.16 11.7 0.1 2.3 2 0 0 2 2 2 0 AAA ATPase domain NACHT PF05729.12 RKO90588.1 - 0.016 15.2 0.0 0.029 14.3 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_14 PF13173.6 RKO90588.1 - 0.018 15.1 0.0 0.053 13.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 RKO90588.1 - 0.036 14.3 0.0 0.096 12.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 RKO90588.1 - 0.036 13.4 0.2 0.089 12.1 0.0 1.7 2 0 0 2 2 2 0 Zeta toxin AAA_30 PF13604.6 RKO90588.1 - 0.036 13.8 0.0 0.074 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain DnaB_C PF03796.15 RKO90588.1 - 0.054 12.8 0.0 0.09 12.1 0.0 1.3 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain T2SSE PF00437.20 RKO90588.1 - 0.073 12.1 0.0 0.12 11.4 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein RsgA_GTPase PF03193.16 RKO90588.1 - 0.1 12.5 0.0 0.23 11.4 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase MukB PF04310.12 RKO90588.1 - 0.11 12.2 0.2 1.5 8.6 0.1 2.2 2 0 0 2 2 2 0 MukB N-terminal RNA_helicase PF00910.22 RKO90588.1 - 0.12 12.8 0.0 0.25 11.7 0.0 1.6 1 0 0 1 1 1 0 RNA helicase AAA_24 PF13479.6 RKO90588.1 - 0.14 11.9 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 RKO90588.1 - 0.15 11.6 0.0 0.27 10.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 RKO90588.1 - 0.21 11.3 0.3 0.4 10.5 0.3 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF212 PF02681.14 RKO90589.1 - 0.073 13.2 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 Divergent PAP2 family RMP PF14996.6 RKO90589.1 - 0.23 11.7 1.4 0.68 10.1 0.1 2.3 2 0 0 2 2 2 0 Retinal Maintenance PRCC PF10253.9 RKO90590.1 - 4.1e-06 27.8 1.9 4.1e-06 27.8 1.9 2.3 2 0 0 2 2 2 1 Mitotic checkpoint regulator, MAD2B-interacting DEC-1_N PF04625.13 RKO90590.1 - 8.5 5.3 22.9 0.61 9.0 4.5 2.2 2 0 0 2 2 2 0 DEC-1 protein, N-terminal region Hydrolase_4 PF12146.8 RKO90591.1 - 8.4e-12 44.9 0.0 1.4e-10 40.8 0.0 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO90591.1 - 1.2e-06 29.3 4.0 1.5e-06 29.0 4.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 RKO90591.1 - 0.0058 16.3 0.0 0.026 14.2 0.0 1.7 1 1 1 2 2 2 1 alpha/beta hydrolase fold Esterase PF00756.20 RKO90591.1 - 0.015 14.9 0.0 0.024 14.3 0.0 1.3 1 0 0 1 1 1 0 Putative esterase TB2_DP1_HVA22 PF03134.19 RKO90592.1 - 8e-23 80.2 8.0 1.1e-22 79.8 8.0 1.2 1 0 0 1 1 1 1 TB2/DP1, HVA22 family Ca_hom_mod PF14798.6 RKO90592.1 - 0.026 13.6 0.1 0.041 13.0 0.1 1.4 1 1 0 1 1 1 0 Calcium homeostasis modulator Ras PF00071.22 RKO90594.1 - 9.5e-53 178.1 0.0 1.1e-52 177.9 0.0 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO90594.1 - 3.9e-19 69.0 0.0 5.4e-19 68.6 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO90594.1 - 5.7e-07 29.1 0.0 7.8e-07 28.7 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 RKO90594.1 - 0.043 13.4 0.0 0.29 10.7 0.0 2.0 1 1 0 2 2 2 0 Elongation factor Tu GTP binding domain PQQ_2 PF13360.6 RKO90596.1 - 6.1e-14 52.2 0.0 1.5e-06 27.9 0.0 3.0 2 1 0 2 2 2 2 PQQ-like domain PQQ PF01011.21 RKO90596.1 - 3.1e-06 26.8 0.2 0.028 14.3 0.0 5.0 5 1 0 5 5 5 1 PQQ enzyme repeat PQQ_3 PF13570.6 RKO90596.1 - 3.1e-05 24.3 3.1 0.34 11.5 0.0 5.6 6 0 0 6 6 6 2 PQQ-like domain An_peroxidase PF03098.15 RKO90597.1 - 1.9e-97 327.1 0.0 2.5e-97 326.6 0.0 1.1 1 0 0 1 1 1 1 Animal haem peroxidase Cyt-b5 PF00173.28 RKO90597.1 - 3.2e-17 62.4 0.0 6.3e-17 61.5 0.0 1.5 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain FAD_binding_6 PF00970.24 RKO90597.1 - 1.9e-09 37.8 0.0 4.7e-09 36.5 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 RKO90597.1 - 0.00069 20.2 0.0 0.0022 18.6 0.0 1.9 2 0 0 2 2 2 1 Oxidoreductase NAD-binding domain Cytochrom_B561 PF03188.16 RKO90597.1 - 0.003 17.7 1.9 0.003 17.7 1.9 1.9 2 0 0 2 2 2 1 Eukaryotic cytochrome b561 FKBP_C PF00254.28 RKO90598.1 - 3.9e-32 110.4 0.1 4.8e-32 110.1 0.1 1.1 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_N_2 PF18023.1 RKO90598.1 - 0.0028 17.7 0.0 0.0075 16.4 0.0 1.6 1 1 0 1 1 1 1 BDBT FKBP like N-terminal SWIB PF02201.18 RKO90599.1 - 4.1e-19 68.2 0.2 1.4e-18 66.5 0.2 2.0 1 0 0 1 1 1 1 SWIB/MDM2 domain MIT PF04212.18 RKO90600.1 - 1.5e-09 37.8 7.3 7.9e-05 22.6 1.1 3.0 3 0 0 3 3 3 2 MIT (microtubule interacting and transport) domain Pkinase PF00069.25 RKO90600.1 - 0.089 12.1 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein kinase domain PTH2 PF01981.16 RKO90601.1 - 1.8e-40 137.9 0.1 2e-40 137.7 0.1 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 Bot1p PF12298.8 RKO90603.1 - 1.2e-25 90.7 1.2 7.6e-25 88.1 0.0 2.5 2 1 0 2 2 2 1 Eukaryotic mitochondrial regulator protein MRP-L20 PF12824.7 RKO90603.1 - 0.00071 19.8 0.2 0.0032 17.6 0.1 1.9 1 1 1 2 2 2 1 Mitochondrial ribosomal protein subunit L20 Rep_fac_C PF08542.11 RKO90604.1 - 6e-18 65.0 0.4 1.3e-17 63.9 0.4 1.6 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA PF00004.29 RKO90604.1 - 9.1e-18 65.0 0.0 2.9e-17 63.3 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 RKO90604.1 - 3.8e-14 52.8 0.0 4e-12 46.2 0.0 2.2 1 1 0 1 1 1 1 DNA polymerase III, delta subunit Rad17 PF03215.15 RKO90604.1 - 1.7e-06 28.1 0.0 4.5e-06 26.7 0.0 1.7 2 0 0 2 2 1 1 Rad17 P-loop domain AAA_11 PF13086.6 RKO90604.1 - 5.8e-06 26.3 0.1 2.2e-05 24.4 0.1 2.0 1 1 0 1 1 1 1 AAA domain RuvB_N PF05496.12 RKO90604.1 - 1.4e-05 24.9 0.0 7.3e-05 22.6 0.0 2.1 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 RKO90604.1 - 1.9e-05 24.9 0.1 0.0023 18.2 0.0 2.9 3 1 0 3 3 1 1 AAA domain AAA_14 PF13173.6 RKO90604.1 - 5e-05 23.4 0.0 0.00016 21.7 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 RKO90604.1 - 5e-05 23.7 0.0 0.002 18.5 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_30 PF13604.6 RKO90604.1 - 0.00047 19.9 0.0 0.00099 18.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 RKO90604.1 - 0.00098 18.9 0.0 0.0094 15.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 RKO90604.1 - 0.0015 18.0 0.0 0.032 13.6 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_19 PF13245.6 RKO90604.1 - 0.0015 18.9 0.0 0.0071 16.7 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 RKO90604.1 - 0.002 18.1 0.2 0.022 14.8 0.0 2.7 3 1 0 3 3 3 1 AAA domain (dynein-related subfamily) DUF815 PF05673.13 RKO90604.1 - 0.0028 16.9 0.0 0.0046 16.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_18 PF13238.6 RKO90604.1 - 0.0054 17.3 0.1 0.064 13.8 0.0 2.4 2 2 0 2 2 2 1 AAA domain AAA_7 PF12775.7 RKO90604.1 - 0.0079 15.7 0.0 0.015 14.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_assoc_2 PF16193.5 RKO90604.1 - 0.0079 16.5 0.0 0.023 15.0 0.0 1.9 1 0 0 1 1 1 1 AAA C-terminal domain ResIII PF04851.15 RKO90604.1 - 0.01 15.9 0.0 0.041 13.9 0.0 1.9 2 1 1 3 3 2 0 Type III restriction enzyme, res subunit AAA_28 PF13521.6 RKO90604.1 - 0.019 15.2 0.0 0.036 14.3 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 RKO90604.1 - 0.021 14.1 0.0 0.08 12.2 0.0 1.8 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) RNA_helicase PF00910.22 RKO90604.1 - 0.022 15.1 0.0 0.12 12.8 0.0 2.2 2 1 0 2 2 2 0 RNA helicase AAA_3 PF07726.11 RKO90604.1 - 0.029 14.2 0.0 0.078 12.8 0.0 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 RKO90604.1 - 0.07 13.6 0.0 0.1 13.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 RKO90604.1 - 0.089 12.2 0.0 2.6 7.4 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein TniB PF05621.11 RKO90604.1 - 0.1 12.0 0.0 2.5 7.5 0.0 2.3 2 0 0 2 2 2 0 Bacterial TniB protein ABC_tran PF00005.27 RKO90604.1 - 0.11 13.0 0.0 0.38 11.3 0.0 2.1 1 1 0 1 1 1 0 ABC transporter DUF2262 PF10020.9 RKO90606.1 - 0.023 15.1 1.5 0.034 14.5 1.5 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2262) Cadherin-like PF12733.7 RKO90607.1 - 3e-08 34.1 3.5 0.11 13.0 0.1 3.3 3 0 0 3 3 3 3 Cadherin-like beta sandwich domain Adhesin_P1 PF03257.13 RKO90607.1 - 4.4e-05 23.9 5.0 0.94 10.0 0.5 4.0 3 0 0 3 3 3 2 Mycoplasma adhesin P1 CBM_6 PF03422.15 RKO90607.1 - 0.0016 18.8 13.2 0.78 10.0 1.0 3.8 3 1 0 3 3 3 3 Carbohydrate binding module (family 6) CBM60 PF16841.5 RKO90607.1 - 0.0044 17.4 1.4 41 4.7 0.0 4.4 3 1 1 4 4 4 1 Ca-dependent carbohydrate-binding module xylan-binding Baculo_PEP_C PF04513.12 RKO90608.1 - 0.00024 21.2 13.0 0.036 14.1 5.7 3.8 1 1 2 3 3 3 1 Baculovirus polyhedron envelope protein, PEP, C terminus TelA PF05816.11 RKO90608.1 - 0.00055 19.1 16.6 0.0023 17.1 1.2 3.5 1 1 2 3 3 3 2 Toxic anion resistance protein (TelA) DUF948 PF06103.11 RKO90608.1 - 0.0015 18.7 8.2 6.4 7.1 0.1 5.0 2 1 3 5 5 5 0 Bacterial protein of unknown function (DUF948) IFT57 PF10498.9 RKO90608.1 - 0.0036 16.3 11.9 0.0044 16.0 3.9 2.4 1 1 2 3 3 3 1 Intra-flagellar transport protein 57 NPV_P10 PF05531.12 RKO90608.1 - 0.0043 17.5 8.2 11 6.6 0.1 4.5 2 1 2 4 4 4 0 Nucleopolyhedrovirus P10 protein DUF1664 PF07889.12 RKO90608.1 - 0.0084 16.1 11.9 2.5 8.1 0.3 4.1 1 1 3 4 4 4 2 Protein of unknown function (DUF1664) ABC_tran_CTD PF16326.5 RKO90608.1 - 0.009 16.2 0.2 0.89 9.8 0.0 3.6 4 0 0 4 4 3 1 ABC transporter C-terminal domain TPR_MLP1_2 PF07926.12 RKO90608.1 - 0.011 15.8 6.2 1.4 9.0 1.1 3.7 2 1 1 3 3 3 0 TPR/MLP1/MLP2-like protein Holin_BhlA PF10960.8 RKO90608.1 - 0.015 15.3 5.1 1.7 8.6 0.3 3.4 2 1 1 3 3 3 0 BhlA holin family MCPsignal PF00015.21 RKO90608.1 - 0.025 14.4 1.6 0.33 10.7 0.1 2.7 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain CdvA PF18822.1 RKO90608.1 - 0.033 14.0 5.2 2.1 8.2 0.0 4.1 2 1 2 4 4 4 0 CdvA-like coiled-coil domain Prefoldin_3 PF13758.6 RKO90608.1 - 0.15 12.2 7.6 1.7 8.8 0.1 4.1 1 1 2 3 3 3 0 Prefoldin subunit DUF2089 PF09862.9 RKO90608.1 - 0.15 12.1 0.9 1.3 9.1 0.1 2.7 1 1 0 2 2 2 0 Protein of unknown function (DUF2089) GvpL_GvpF PF06386.11 RKO90608.1 - 0.2 11.5 1.7 5.1 7.0 0.1 2.3 2 0 0 2 2 2 0 Gas vesicle synthesis protein GvpL/GvpF Cortex-I_coil PF09304.10 RKO90608.1 - 0.26 11.5 7.2 8.2 6.7 0.9 3.6 2 1 0 3 3 3 0 Cortexillin I, coiled coil HisKA_3 PF07730.13 RKO90608.1 - 0.3 11.6 1.7 8.9 6.9 0.0 3.2 3 0 0 3 3 3 0 Histidine kinase DUF643 PF04867.12 RKO90608.1 - 0.33 11.6 3.3 0.86 10.2 0.7 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF643) V_ATPase_I PF01496.19 RKO90608.1 - 0.4 8.6 13.4 0.036 12.0 1.0 2.8 1 1 2 3 3 3 0 V-type ATPase 116kDa subunit family PspA_IM30 PF04012.12 RKO90608.1 - 0.68 9.5 5.0 1.1 8.8 1.3 2.9 1 1 2 3 3 3 0 PspA/IM30 family DUF3450 PF11932.8 RKO90608.1 - 0.7 9.2 11.7 0.044 13.1 1.9 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF3450) Gp-FAR-1 PF05823.12 RKO90608.1 - 0.84 10.0 5.1 0.87 9.9 1.1 2.6 2 1 0 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) LOH1CR12 PF10158.9 RKO90608.1 - 0.85 9.6 7.1 0.83 9.7 1.1 3.2 1 1 1 3 3 3 0 Tumour suppressor protein Fib_alpha PF08702.10 RKO90608.1 - 0.99 9.6 14.4 14 5.9 0.1 3.5 1 1 1 3 3 3 0 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 RKO90608.1 - 1.1 9.7 9.6 11 6.4 2.4 4.2 2 1 2 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Lipoprotein_7 PF01540.16 RKO90608.1 - 1.1 8.5 8.5 2.6 7.2 8.3 1.7 1 1 0 1 1 1 0 Adhesin lipoprotein Dynactin_p22 PF07426.11 RKO90608.1 - 1.4 8.7 11.0 0.4 10.5 2.3 3.4 4 1 0 4 4 3 0 Dynactin subunit p22 Mod_r PF07200.13 RKO90608.1 - 2 8.5 9.7 1.6 8.8 3.3 3.0 1 1 3 4 4 4 0 Modifier of rudimentary (Mod(r)) protein VPS53_C PF16854.5 RKO90608.1 - 2.3 8.1 7.8 1.1 9.1 3.5 2.4 2 1 0 2 2 2 0 Vacuolar protein sorting-associated protein 53 C-terminus CCDC53 PF10152.9 RKO90608.1 - 2.3 8.6 7.8 2.4 8.6 0.0 3.5 4 0 0 4 4 3 0 Subunit CCDC53 of WASH complex KxDL PF10241.9 RKO90608.1 - 2.6 8.4 10.7 5.3 7.4 0.2 4.7 2 1 3 5 5 5 0 Uncharacterized conserved protein Laminin_II PF06009.12 RKO90608.1 - 2.7 8.0 11.9 3.8 7.5 1.1 3.9 1 1 3 4 4 4 0 Laminin Domain II Exonuc_VII_L PF02601.15 RKO90608.1 - 5.3 6.5 13.9 1.1e+03 -1.1 14.0 2.4 1 1 0 1 1 1 0 Exonuclease VII, large subunit Snf7 PF03357.21 RKO90608.1 - 5.4 6.6 6.8 7.1 6.2 2.8 2.9 1 1 1 2 2 2 0 Snf7 Prefoldin_2 PF01920.20 RKO90608.1 - 5.7 6.9 13.0 3.6 7.6 0.3 4.0 2 2 1 3 3 3 0 Prefoldin subunit Fzo_mitofusin PF04799.13 RKO90608.1 - 8.4 5.9 9.9 0.89 9.1 0.3 3.0 3 1 1 4 4 4 0 fzo-like conserved region Pirin_C PF05726.13 RKO90609.1 - 7.9e-21 74.4 0.0 1e-09 38.6 0.0 2.1 2 0 0 2 2 2 2 Pirin C-terminal cupin domain Pirin PF02678.16 RKO90610.1 - 4.6e-34 116.6 0.0 8.9e-34 115.7 0.0 1.5 1 0 0 1 1 1 1 Pirin Pirin_C PF05726.13 RKO90610.1 - 9.8e-34 115.8 0.0 8.9e-32 109.6 0.0 2.2 2 0 0 2 2 2 1 Pirin C-terminal cupin domain Cupin_2 PF07883.11 RKO90610.1 - 0.0012 18.5 0.8 0.007 16.1 0.2 2.4 3 0 0 3 3 3 1 Cupin domain Cupin_3 PF05899.12 RKO90610.1 - 0.12 12.1 0.3 0.78 9.5 0.1 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF861) Pirin_C_2 PF17954.1 RKO90610.1 - 0.14 12.4 0.0 0.3 11.3 0.0 1.7 1 0 0 1 1 1 0 Quercetinase C-terminal cupin domain Phage_Mu_Gp45 PF06890.12 RKO90610.1 - 0.16 11.7 0.1 6.6 6.5 0.0 2.7 2 1 1 3 3 3 0 Bacteriophage Mu Gp45 protein LRR_4 PF12799.7 RKO90612.1 - 0.00068 20.0 0.2 7 7.2 0.1 4.3 4 0 0 4 4 4 3 Leucine Rich repeats (2 copies) DUF4390 PF14334.6 RKO90613.1 - 0.18 11.2 0.0 0.32 10.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4390) DUF4842 PF16130.5 RKO90616.1 - 0.15 12.2 0.0 0.41 10.8 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4842) WD40 PF00400.32 RKO90619.1 - 2.9e-11 43.7 1.1 1.9e-08 34.8 0.2 3.2 3 0 0 3 3 3 1 WD domain, G-beta repeat PQQ_3 PF13570.6 RKO90619.1 - 8.7e-05 22.9 1.1 0.049 14.1 0.0 3.1 3 0 0 3 3 3 2 PQQ-like domain PQQ_2 PF13360.6 RKO90619.1 - 0.00025 20.7 0.0 0.00065 19.3 0.0 1.6 2 0 0 2 2 2 1 PQQ-like domain ANAPC4_WD40 PF12894.7 RKO90619.1 - 0.0024 18.1 0.0 0.16 12.3 0.0 2.7 2 1 1 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 RKO90619.1 - 0.26 10.2 0.0 0.35 9.8 0.0 1.2 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Herpes_BLLF1 PF05109.13 RKO90620.1 - 0.35 8.8 8.2 0.51 8.3 8.2 1.2 1 0 0 1 1 1 0 Herpes virus major outer envelope glycoprotein (BLLF1) WD40 PF00400.32 RKO90621.1 - 0.017 16.0 0.1 0.034 15.0 0.1 1.5 1 0 0 1 1 1 0 WD domain, G-beta repeat PQQ_2 PF13360.6 RKO90621.1 - 0.041 13.5 0.0 0.063 12.8 0.0 1.3 1 0 0 1 1 1 0 PQQ-like domain Usp PF00582.26 RKO90623.1 - 9.6e-18 65.1 0.8 1.3e-17 64.7 0.8 1.2 1 0 0 1 1 1 1 Universal stress protein family EAF PF09816.9 RKO90624.1 - 4e-13 49.6 0.0 9.6e-13 48.4 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase II transcription elongation factor TFA2_Winged_2 PF18121.1 RKO90626.1 - 6.4e-20 70.6 1.1 1.2e-19 69.7 0.6 1.8 2 0 0 2 2 2 1 TFA2 Winged helix domain 2 TFIIE_beta PF02186.15 RKO90626.1 - 2.8e-09 37.1 0.2 1.2e-08 35.1 0.0 2.2 2 0 0 2 2 2 1 TFIIE beta subunit core domain DSBA PF01323.20 RKO90626.1 - 0.0026 17.5 0.2 0.004 17.0 0.2 1.2 1 0 0 1 1 1 1 DSBA-like thioredoxin domain cEGF PF12662.7 RKO90627.1 - 1.1e-06 28.5 22.0 0.11 12.4 1.7 4.5 4 0 0 4 4 4 4 Complement Clr-like EGF-like EGF_3 PF12947.7 RKO90627.1 - 9.4e-05 22.5 27.8 0.55 10.5 1.4 4.5 3 2 1 4 4 4 4 EGF domain RANK_CRD_2 PF18278.1 RKO90627.1 - 0.0021 18.2 28.1 0.84 9.8 4.2 4.4 2 1 1 4 4 4 4 Receptor activator of the NF-KB cysteine-rich repeat domain 2 EB PF01683.18 RKO90627.1 - 0.0042 17.4 21.3 1.1 9.6 3.0 4.1 1 1 3 4 4 4 4 EB module CBM_14 PF01607.24 RKO90627.1 - 0.005 17.0 25.3 1.1 9.4 3.4 4.0 1 1 3 4 4 4 3 Chitin binding Peritrophin-A domain hEGF PF12661.7 RKO90627.1 - 0.027 15.1 19.3 5.3 7.8 1.2 5.2 5 0 0 5 5 5 0 Human growth factor-like EGF EGF_MSP1_1 PF12946.7 RKO90627.1 - 0.14 12.2 40.2 0.49 10.5 5.9 5.1 1 1 3 4 4 4 0 MSP1 EGF domain 1 Baculo_VP91_N PF08475.10 RKO90627.1 - 4.3 7.0 9.3 10 5.8 1.1 2.7 1 1 2 3 3 3 0 Viral capsid protein 91 N-terminal Bin3 PF06859.12 RKO90631.1 - 8.5e-32 110.0 0.0 1.1e-31 109.6 0.0 1.2 1 0 0 1 1 1 1 Bicoid-interacting protein 3 (Bin3) Methyltransf_12 PF08242.12 RKO90631.1 - 2.9e-09 37.6 0.0 0.00039 21.1 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_23 PF13489.6 RKO90631.1 - 5.9e-09 36.0 0.0 7.2e-09 35.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 RKO90631.1 - 1e-08 35.8 0.0 8.5e-05 23.2 0.0 2.4 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_11 PF08241.12 RKO90631.1 - 1.1e-07 32.3 0.0 0.018 15.6 0.0 2.3 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_31 PF13847.6 RKO90631.1 - 8.1e-07 29.0 0.0 0.00069 19.4 0.0 2.1 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_2 PF00891.18 RKO90631.1 - 0.00012 21.4 0.0 0.0012 18.2 0.0 2.0 2 0 0 2 2 2 1 O-methyltransferase domain PCMT PF01135.19 RKO90631.1 - 0.0011 18.8 0.0 0.014 15.1 0.0 2.0 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 RKO90631.1 - 0.0024 17.4 0.0 0.12 11.9 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase small domain PrmA PF06325.13 RKO90631.1 - 0.0055 16.1 0.0 0.0084 15.5 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 RKO90631.1 - 0.031 14.2 0.0 0.088 12.7 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_9 PF08003.11 RKO90631.1 - 0.048 12.6 0.0 0.81 8.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1698) Polysacc_deac_1 PF01522.21 RKO90633.1 - 2.2e-23 82.5 0.0 2.4e-23 82.3 0.0 1.0 1 0 0 1 1 1 1 Polysaccharide deacetylase Tom6 PF17112.5 RKO90633.1 - 0.17 11.4 1.0 14 5.3 0.1 2.2 2 0 0 2 2 2 0 Mitochondrial import receptor subunit Tom6, fungal HIG_1_N PF04588.13 RKO90634.1 - 0.069 13.4 0.2 0.73 10.1 0.0 2.0 2 0 0 2 2 2 0 Hypoxia induced protein conserved region Med20 PF08612.11 RKO90635.1 - 1.8e-22 79.8 0.0 2.2e-22 79.5 0.0 1.1 1 0 0 1 1 1 1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex MOZ_SAS PF01853.18 RKO90637.1 - 1.5e-70 236.6 2.5 1.5e-70 236.6 2.5 1.7 2 0 0 2 2 2 1 MOZ/SAS family Tudor-knot PF11717.8 RKO90637.1 - 3.6e-18 65.2 0.0 8.3e-18 64.0 0.0 1.7 1 0 0 1 1 1 1 RNA binding activity-knot of a chromodomain zf-MYST PF17772.1 RKO90637.1 - 3.4e-12 45.8 3.3 8.8e-12 44.5 3.3 1.7 1 0 0 1 1 1 1 MYST family zinc finger domain Acetyltransf_7 PF13508.7 RKO90637.1 - 0.005 17.2 0.0 0.0096 16.3 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain HTH_11 PF08279.12 RKO90637.1 - 0.0092 15.9 0.3 0.017 15.0 0.3 1.4 1 0 0 1 1 1 1 HTH domain Acetyltransf_1 PF00583.25 RKO90637.1 - 0.025 14.8 0.0 0.052 13.8 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family Acetyltransf_16 PF05301.11 RKO90637.1 - 0.078 12.7 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 GNAT acetyltransferase, Mec-17 HTH_Mga PF08280.11 RKO90637.1 - 0.13 12.3 1.0 0.38 10.8 0.3 2.1 2 1 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain GATase_6 PF13522.6 RKO90639.1 - 6e-17 62.1 0.2 1.1e-16 61.2 0.0 1.6 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_7 PF13537.6 RKO90639.1 - 7.9e-14 51.6 0.0 1.2e-13 51.1 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 RKO90639.1 - 4.2e-06 25.9 0.0 1.2e-05 24.3 0.0 1.6 2 0 0 2 2 2 1 Glutamine amidotransferases class-II DUF4246 PF14033.6 RKO90640.1 - 6.6e-59 200.2 0.0 3.1e-30 105.7 0.0 4.5 2 1 2 4 4 4 4 Protein of unknown function (DUF4246) RRM_1 PF00076.22 RKO90641.1 - 2e-13 49.9 0.0 2.7e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FoP_duplication PF13865.6 RKO90641.1 - 6.9e-11 42.5 3.5 1.3e-10 41.6 3.5 1.4 1 0 0 1 1 1 1 C-terminal duplication domain of Friend of PRMT1 RRM_occluded PF16842.5 RKO90641.1 - 0.066 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Occluded RNA-recognition motif Gly-rich_Ago1 PF12764.7 RKO90641.1 - 0.33 11.8 4.8 1.1 10.0 4.6 1.8 2 0 0 2 2 2 0 Glycine-rich region of argonaut UDPGP PF01704.18 RKO90642.1 - 1.2e-181 603.8 0.2 1.5e-181 603.5 0.2 1.0 1 0 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase F-box-like PF12937.7 RKO90643.1 - 1.8e-06 27.7 0.6 3.8e-06 26.7 0.0 1.9 2 0 0 2 2 2 1 F-box-like PTPRCAP PF15713.5 RKO90643.1 - 0.53 10.6 5.4 1.1 9.6 5.4 1.4 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated RasGEF PF00617.19 RKO90644.1 - 3.8e-11 43.5 0.0 6.6e-11 42.7 0.0 1.3 1 0 0 1 1 1 1 RasGEF domain ASXH PF13919.6 RKO90645.1 - 3.1e-12 46.7 0.0 4.6e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Asx homology domain RAMA PF18755.1 RKO90645.1 - 0.00064 20.1 0.0 0.002 18.5 0.0 1.8 1 1 1 2 2 2 1 Restriction Enzyme Adenine Methylase Associated DUF3336 PF11815.8 RKO90645.1 - 0.062 13.0 2.3 0.099 12.4 1.4 1.7 1 1 0 2 2 2 0 Domain of unknown function (DUF3336) DsbC PF11412.8 RKO90645.1 - 0.11 12.6 0.1 0.21 11.6 0.1 1.5 1 0 0 1 1 1 0 Disulphide bond corrector protein DsbC NDUF_B12 PF08122.12 RKO90648.1 - 0.04 14.0 0.1 0.072 13.1 0.1 1.4 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B12 subunit family Peptidase_M48_N PF16491.5 RKO90651.1 - 1.5e-56 191.2 0.7 1.5e-56 191.2 0.7 1.9 2 0 0 2 2 2 1 CAAX prenyl protease N-terminal, five membrane helices Peptidase_M48 PF01435.18 RKO90651.1 - 6.4e-44 150.1 0.0 1e-43 149.4 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M48 SprT-like PF10263.9 RKO90651.1 - 0.19 11.6 0.0 0.43 10.4 0.0 1.5 1 0 0 1 1 1 0 SprT-like family Pkinase PF00069.25 RKO90655.1 - 1.1e-58 198.7 0.0 1.5e-57 194.9 0.0 2.1 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO90655.1 - 5.6e-27 94.6 0.1 2.2e-19 69.8 0.0 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase Haspin_kinase PF12330.8 RKO90655.1 - 6.2e-07 28.7 0.1 8.6e-07 28.2 0.1 1.1 1 0 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 RKO90655.1 - 7.7e-05 22.7 2.9 0.015 15.2 0.3 2.9 2 1 1 3 3 3 2 Phosphotransferase enzyme family Kinase-like PF14531.6 RKO90655.1 - 0.00038 19.9 0.7 0.00094 18.6 0.0 1.9 3 0 0 3 3 3 1 Kinase-like Kdo PF06293.14 RKO90655.1 - 0.001 18.5 0.4 0.0035 16.7 0.0 2.0 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 RKO90655.1 - 0.019 14.6 0.1 0.043 13.4 0.1 1.6 1 0 0 1 1 1 0 RIO1 family Pkinase_C PF00433.24 RKO90655.1 - 0.02 15.6 0.1 0.05 14.3 0.1 1.7 1 0 0 1 1 1 0 Protein kinase C terminal domain Seadorna_VP7 PF07387.11 RKO90655.1 - 0.021 13.9 0.0 0.039 13.0 0.0 1.3 1 0 0 1 1 1 0 Seadornavirus VP7 Pkinase_fungal PF17667.1 RKO90655.1 - 0.032 13.0 0.4 0.067 12.0 0.1 1.6 1 1 0 2 2 2 0 Fungal protein kinase DDE_Tnp_2 PF04693.12 RKO90655.1 - 0.082 12.1 0.0 2.1 7.5 0.0 2.1 2 0 0 2 2 2 0 Archaeal putative transposase ISC1217 SH3_9 PF14604.6 RKO90656.1 - 6.4e-09 35.5 0.1 1.2e-08 34.7 0.1 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO90656.1 - 2e-06 27.3 0.1 3.5e-06 26.5 0.1 1.3 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 RKO90656.1 - 4e-05 23.2 0.0 6.8e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain Adeno_E3_CR2 PF02439.15 RKO90656.1 - 0.028 14.2 0.2 0.058 13.2 0.2 1.5 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 Orthoreo_P10 PF07204.11 RKO90656.1 - 0.036 14.0 0.4 0.14 12.1 0.4 2.0 1 0 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 SKG6 PF08693.10 RKO90656.1 - 0.49 9.9 3.0 1.2 8.6 3.0 1.6 1 0 0 1 1 1 0 Transmembrane alpha-helix domain Pkinase PF00069.25 RKO90657.1 - 3.4e-57 193.8 0.0 4.1e-57 193.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO90657.1 - 1.5e-40 139.1 0.0 1.9e-40 138.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO90657.1 - 0.00096 18.0 0.0 0.002 17.0 0.0 1.4 1 1 0 1 1 1 1 Fungal protein kinase Mgm101p PF06420.12 RKO90658.1 - 6e-76 253.7 0.0 7.1e-76 253.5 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial genome maintenance MGM101 G-patch PF01585.23 RKO90659.1 - 3.7e-15 55.5 4.1 5.6e-15 55.0 4.1 1.3 1 0 0 1 1 1 1 G-patch domain G-patch_2 PF12656.7 RKO90659.1 - 7.9e-06 25.9 2.3 1.3e-05 25.2 2.3 1.3 1 0 0 1 1 1 1 G-patch domain CitX PF03802.14 RKO90660.1 - 0.054 13.2 0.6 6.8 6.4 0.0 2.7 3 0 0 3 3 3 0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase Cation_efflux PF01545.21 RKO90662.1 - 1.8e-46 158.4 15.5 2e-46 158.3 15.5 1.0 1 0 0 1 1 1 1 Cation efflux family Pectinesterase PF01095.19 RKO90663.1 - 3.9e-37 127.6 0.3 6.1e-37 126.9 0.3 1.2 1 0 0 1 1 1 1 Pectinesterase NMO PF03060.15 RKO90664.1 - 1e-19 71.1 5.3 2.2e-17 63.4 5.3 2.1 1 1 0 1 1 1 1 Nitronate monooxygenase IMPDH PF00478.25 RKO90664.1 - 0.024 13.6 2.3 2.3 7.1 0.3 2.2 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 RKO90664.1 - 0.49 9.4 5.0 0.096 11.7 0.7 1.9 2 1 0 2 2 2 0 FMN-dependent dehydrogenase Rhodanese PF00581.20 RKO90665.1 - 1.4e-12 48.1 0.0 1.6e-12 47.8 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain DUF4267 PF14087.6 RKO90665.1 - 0.0098 16.0 0.1 0.013 15.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4267) TPR_1 PF00515.28 RKO90666.1 - 4.4e-29 99.1 2.8 2.8e-08 33.2 0.1 6.2 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_2 PF07719.17 RKO90666.1 - 7.5e-25 85.0 3.4 0.00011 22.0 0.2 6.2 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_17 PF13431.6 RKO90666.1 - 1.6e-20 71.9 2.0 0.00016 21.8 0.0 5.3 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_16 PF13432.6 RKO90666.1 - 2.9e-20 72.6 18.6 8.9e-08 32.7 1.8 4.6 2 2 3 5 5 5 5 Tetratricopeptide repeat TPR_14 PF13428.6 RKO90666.1 - 3.3e-20 71.1 11.1 1.7e-05 25.3 0.3 5.9 3 2 3 6 6 6 4 Tetratricopeptide repeat TPR_11 PF13414.6 RKO90666.1 - 5.8e-19 67.5 4.1 3.2e-07 29.9 0.1 4.9 3 1 2 5 5 5 4 TPR repeat TPR_8 PF13181.6 RKO90666.1 - 1.6e-17 62.2 0.9 2e-05 24.4 0.1 6.1 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 RKO90666.1 - 7.5e-16 58.4 5.9 5.7e-05 23.5 0.8 4.4 2 2 3 5 5 5 4 Tetratricopeptide repeat TPR_7 PF13176.6 RKO90666.1 - 3.2e-11 42.4 0.9 0.026 14.6 0.0 5.3 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_20 PF14561.6 RKO90666.1 - 4.9e-11 42.8 0.6 0.0011 19.3 0.1 4.3 2 2 2 4 4 4 4 Tetratricopeptide repeat TPR_6 PF13174.6 RKO90666.1 - 2.7e-09 37.1 1.8 5.1 7.9 0.0 6.0 6 0 0 6 6 6 2 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO90666.1 - 4.8e-09 36.3 3.0 0.0013 18.9 0.1 2.5 2 1 0 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.6 RKO90666.1 - 1.4e-08 34.7 2.7 0.0012 18.9 0.1 4.1 2 2 1 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 RKO90666.1 - 1.6e-08 34.7 11.5 0.02 15.2 0.2 5.9 4 2 2 6 6 6 2 Tetratricopeptide repeat BTAD PF03704.17 RKO90666.1 - 0.025 15.0 3.5 0.77 10.2 0.1 3.1 2 2 0 2 2 2 0 Bacterial transcriptional activator domain TPR_15 PF13429.6 RKO90666.1 - 0.036 13.3 3.1 3.7 6.7 0.9 2.7 2 2 1 3 3 3 0 Tetratricopeptide repeat DUF1641 PF07849.11 RKO90666.1 - 0.043 13.7 0.2 0.1 12.5 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1641) DUF4919 PF16266.5 RKO90666.1 - 0.046 13.7 0.0 0.095 12.6 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4919) TPR_3 PF07720.12 RKO90666.1 - 0.093 12.7 0.2 8 6.6 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat MIT PF04212.18 RKO90666.1 - 0.11 12.6 2.9 2.6 8.2 0.1 3.9 5 0 0 5 5 5 0 MIT (microtubule interacting and transport) domain DUF3151 PF11349.8 RKO90666.1 - 1.1 9.3 4.3 4.2 7.5 1.1 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3151) TPR_10 PF13374.6 RKO90666.1 - 6.9 6.7 13.8 0.58 10.1 0.3 4.8 7 0 0 7 7 6 0 Tetratricopeptide repeat BAR_3_WASP_bdg PF10456.9 RKO90668.1 - 0.18 11.2 0.0 0.27 10.6 0.0 1.1 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein TPR_21 PF09976.9 RKO90668.1 - 2.8 7.6 8.9 6 6.5 4.9 2.2 1 1 1 2 2 2 0 Tetratricopeptide repeat-like domain Metallophos PF00149.28 RKO90670.1 - 8.9e-06 26.3 0.0 1.3e-05 25.8 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Bclt PF15318.6 RKO90674.1 - 0.0038 17.1 0.1 0.015 15.2 0.1 1.8 2 0 0 2 2 2 1 Putative Bcl-2 like protein of testis CLLAC PF15675.5 RKO90676.1 - 0.061 12.9 0.6 0.061 12.9 0.6 2.5 2 0 0 2 2 2 0 CLLAC-motif containing domain FtsX PF02687.21 RKO90676.1 - 0.15 12.6 0.3 0.15 12.6 0.3 5.0 4 2 0 4 4 4 0 FtsX-like permease family Apo-CII PF05355.11 RKO90676.1 - 3.8 7.7 4.7 6 7.1 0.5 2.4 2 0 0 2 2 2 0 Apolipoprotein C-II Chorismate_synt PF01264.21 RKO90677.1 - 2.3e-138 460.4 0.0 2.7e-138 460.2 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase Ras PF00071.22 RKO90678.1 - 7.7e-31 106.9 0.0 1.1e-30 106.3 0.0 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO90678.1 - 8.4e-28 97.0 0.0 1.3e-27 96.4 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO90678.1 - 3.6e-07 29.8 0.0 1.5e-06 27.8 0.0 1.8 2 0 0 2 2 2 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 RKO90678.1 - 8.8e-05 22.1 0.0 0.00039 20.0 0.0 1.8 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 RKO90678.1 - 0.0043 17.1 0.0 0.01 15.9 0.0 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_16 PF13191.6 RKO90678.1 - 0.1 12.9 0.0 0.41 11.0 0.0 2.0 2 1 1 3 3 3 0 AAA ATPase domain FCH PF00611.23 RKO90680.1 - 2.6e-12 46.8 0.6 5.4e-12 45.8 0.0 1.9 2 1 0 2 2 2 1 Fes/CIP4, and EFC/F-BAR homology domain HORMA PF02301.18 RKO90681.1 - 4.2e-05 23.2 0.0 0.00012 21.8 0.0 1.6 1 1 0 1 1 1 1 HORMA domain SLED PF12140.8 RKO90681.1 - 0.12 12.9 0.1 0.24 11.9 0.0 1.6 2 0 0 2 2 2 0 SLED domain Ribosomal_L7Ae PF01248.26 RKO90682.1 - 6.6e-25 86.7 1.0 1.3e-24 85.7 1.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNase_P_pop3 PF08228.11 RKO90682.1 - 3.7e-05 23.8 0.0 4.7e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 RNase P subunit Pop3 CEP209_CC5 PF16574.5 RKO90682.1 - 0.023 14.9 4.1 0.034 14.3 4.1 1.3 1 0 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 TRIQK PF15168.6 RKO90682.1 - 7 6.6 7.7 2.6 8.0 5.2 1.6 1 1 1 2 2 2 0 Triple QxxK/R motif-containing protein family bZIP_1 PF00170.21 RKO90683.1 - 0.00078 19.5 5.5 0.0012 18.9 5.5 1.3 1 0 0 1 1 1 1 bZIP transcription factor Synthase_beta PF11421.8 RKO90683.1 - 0.015 16.0 1.7 0.037 14.7 1.7 1.7 1 0 0 1 1 1 0 ATP synthase F1 beta subunit PPP5 PF08321.12 RKO90683.1 - 0.081 13.2 0.1 1.6 9.1 0.0 2.1 2 0 0 2 2 2 0 PPP5 TPR repeat region Xpo1 PF08389.12 RKO90684.1 - 0.095 12.8 0.0 2.1 8.4 0.0 2.5 2 0 0 2 2 2 0 Exportin 1-like protein C12orf66_like PF09404.10 RKO90686.1 - 1.2e-23 83.7 0.0 3.5e-16 59.1 0.0 2.1 2 0 0 2 2 2 2 KICSTOR complex C12orf66 like DUF908 PF06012.12 RKO90686.1 - 0.023 14.2 0.1 0.031 13.7 0.1 1.2 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) DUF4360 PF14273.6 RKO90689.1 - 2e-55 187.4 4.2 2.3e-55 187.2 4.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4360) Ribosomal_60s PF00428.19 RKO90690.1 - 0.028 15.0 7.3 0.028 15.0 7.3 2.6 2 0 0 2 2 2 0 60s Acidic ribosomal protein Med8 PF10232.9 RKO90690.1 - 0.052 13.1 1.6 0.074 12.6 1.6 1.2 1 0 0 1 1 1 0 Mediator of RNA polymerase II transcription complex subunit 8 DUF1318 PF07027.12 RKO90690.1 - 0.08 13.4 1.0 0.19 12.2 1.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1318) ORC6 PF05460.13 RKO90690.1 - 0.18 11.0 8.9 0.94 8.7 0.1 2.3 2 0 0 2 2 2 0 Origin recognition complex subunit 6 (ORC6) MID_MedPIWI PF18296.1 RKO90690.1 - 0.2 11.4 2.0 0.42 10.4 2.2 1.4 1 1 0 1 1 1 0 MID domain of medPIWI Sporozoite_P67 PF05642.11 RKO90690.1 - 0.31 9.1 3.1 0.46 8.5 3.1 1.2 1 0 0 1 1 1 0 Sporozoite P67 surface antigen FAM176 PF14851.6 RKO90690.1 - 0.43 10.2 4.0 1.1 8.9 4.0 1.7 1 0 0 1 1 1 0 FAM176 family DUF4746 PF15928.5 RKO90690.1 - 1.5 8.2 6.7 2.4 7.5 6.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Ndc1_Nup PF09531.10 RKO90690.1 - 1.6 7.3 5.5 2.2 6.9 5.5 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup CDC45 PF02724.14 RKO90690.1 - 1.7 6.8 9.5 2.3 6.4 9.5 1.1 1 0 0 1 1 1 0 CDC45-like protein DUF4554 PF15091.6 RKO90690.1 - 6.3 5.6 6.4 8.8 5.1 6.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4554) MscS_TM PF12794.7 RKO90690.1 - 6.5 5.5 4.6 9.9 4.9 4.6 1.3 1 1 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 Spore_coat_CotO PF14153.6 RKO90690.1 - 10 6.0 10.2 16 5.4 10.2 1.3 1 0 0 1 1 1 0 Spore coat protein CotO YqjK PF13997.6 RKO90691.1 - 0.052 13.8 0.3 0.1 12.8 0.3 1.5 1 0 0 1 1 1 0 YqjK-like protein Na_H_Exchanger PF00999.21 RKO90697.1 - 7.4e-52 176.4 41.0 9.3e-52 176.1 41.0 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family WD40 PF00400.32 RKO90698.1 - 0.0088 16.9 0.2 7.2 7.7 0.0 3.0 3 0 0 3 3 3 2 WD domain, G-beta repeat PQQ_3 PF13570.6 RKO90698.1 - 0.14 12.7 2.9 9.6 6.8 0.3 3.4 2 1 1 3 3 3 0 PQQ-like domain HMA PF00403.26 RKO90699.1 - 8.6e-19 67.7 0.3 2.2e-17 63.2 0.0 2.1 2 0 0 2 2 2 1 Heavy-metal-associated domain YbaB_DNA_bd PF02575.16 RKO90699.1 - 0.12 12.6 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 YbaB/EbfC DNA-binding family TFIID-18kDa PF02269.16 RKO90700.1 - 3e-24 84.9 0.1 6.4e-24 83.8 0.1 1.5 1 0 0 1 1 1 1 Transcription initiation factor IID, 18kD subunit TAFII28 PF04719.14 RKO90700.1 - 0.076 13.1 1.2 0.19 11.8 0.2 2.3 2 1 0 2 2 2 0 hTAFII28-like protein conserved region SMK-1 PF04802.15 RKO90701.1 - 1.4e-71 240.3 0.9 1e-70 237.5 0.4 2.3 3 0 0 3 3 3 1 Component of IIS longevity pathway SMK-1 RICTOR_N PF14664.6 RKO90701.1 - 0.014 14.4 0.3 0.032 13.2 0.3 1.6 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, N-term Cnd3 PF12719.7 RKO90701.1 - 0.051 12.7 0.0 0.17 11.0 0.0 1.8 2 0 0 2 2 2 0 Nuclear condensing complex subunits, C-term domain DDE_1 PF03184.19 RKO90701.1 - 0.18 11.4 0.0 0.92 9.1 0.0 2.0 2 0 0 2 2 2 0 DDE superfamily endonuclease Ldh_1_N PF00056.23 RKO90702.1 - 4.2e-49 166.3 0.3 6.4e-49 165.7 0.3 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 RKO90702.1 - 3.5e-42 144.2 1.0 6.1e-42 143.4 0.2 1.8 2 0 0 2 2 2 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain 3Beta_HSD PF01073.19 RKO90702.1 - 0.0065 15.5 0.0 0.0099 14.9 0.0 1.4 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Semialdhyde_dh PF01118.24 RKO90702.1 - 0.054 13.9 0.1 0.19 12.1 0.1 2.0 1 1 1 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain Dfp1_Him1_M PF08630.10 RKO90706.1 - 1.1e-07 32.2 0.3 2.8e-07 30.8 0.0 1.8 2 0 0 2 2 2 1 Dfp1/Him1, central region zf-DBF PF07535.12 RKO90706.1 - 0.00044 20.3 0.4 0.00076 19.5 0.4 1.3 1 0 0 1 1 1 1 DBF zinc finger Pyridoxal_deC PF00282.19 RKO90708.1 - 3.4e-23 82.0 0.0 4.7e-23 81.5 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 RKO90708.1 - 1.7e-12 47.0 0.0 1.7e-11 43.7 0.0 2.0 1 1 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 RKO90708.1 - 3.9e-07 29.7 0.2 5.6e-07 29.2 0.2 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 RKO90708.1 - 0.0045 15.6 0.0 0.0097 14.5 0.0 1.6 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Cmc1 PF08583.10 RKO90709.1 - 1.7e-12 47.2 0.8 1.8e-12 47.1 0.8 1.0 1 0 0 1 1 1 1 Cytochrome c oxidase biogenesis protein Cmc1 like LON_substr_bdg PF02190.16 RKO90710.1 - 8.4e-39 133.6 0.3 1.8e-38 132.5 0.0 1.7 2 0 0 2 2 2 1 ATP-dependent protease La (LON) substrate-binding domain AAA PF00004.29 RKO90710.1 - 2.1e-23 83.2 0.0 5.7e-23 81.8 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 RKO90710.1 - 4.9e-08 33.1 0.0 1e-07 32.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 RKO90710.1 - 1.8e-05 25.0 0.2 0.00068 19.9 0.2 2.9 1 1 0 1 1 1 1 AAA domain RuvB_N PF05496.12 RKO90710.1 - 2.9e-05 23.9 0.1 0.00033 20.4 0.1 2.7 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_PrkA PF08298.11 RKO90710.1 - 7.1e-05 21.9 0.0 0.00014 20.9 0.0 1.4 1 0 0 1 1 1 1 PrkA AAA domain AAA_2 PF07724.14 RKO90710.1 - 0.00014 22.1 0.0 0.00037 20.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 RKO90710.1 - 0.00054 20.4 1.2 0.0017 18.8 0.2 2.3 2 1 0 2 2 2 1 AAA ATPase domain AAA_18 PF13238.6 RKO90710.1 - 0.00063 20.3 0.6 0.0046 17.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.6 RKO90710.1 - 0.0038 17.3 0.0 0.012 15.6 0.0 1.9 2 0 0 2 2 1 1 AAA domain SKI PF01202.22 RKO90710.1 - 0.021 15.0 0.1 0.057 13.5 0.1 1.8 1 0 0 1 1 1 0 Shikimate kinase NTPase_1 PF03266.15 RKO90710.1 - 0.024 14.6 1.0 1.2 9.0 0.1 2.7 1 1 1 2 2 2 0 NTPase AAA_30 PF13604.6 RKO90710.1 - 0.032 13.9 0.0 0.081 12.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 RKO90710.1 - 0.037 14.4 0.0 0.093 13.1 0.0 1.7 1 0 0 1 1 1 0 RNA helicase MIEAP PF16026.5 RKO90710.1 - 0.045 14.0 0.2 0.093 12.9 0.2 1.5 1 0 0 1 1 1 0 Mitochondria-eating protein IstB_IS21 PF01695.17 RKO90710.1 - 0.056 13.2 0.0 0.15 11.8 0.0 1.7 1 0 0 1 1 1 0 IstB-like ATP binding protein ClpB_D2-small PF10431.9 RKO90710.1 - 0.058 13.5 1.9 0.96 9.5 0.1 3.3 3 0 0 3 3 3 0 C-terminal, D2-small domain, of ClpB protein AAA_24 PF13479.6 RKO90710.1 - 0.08 12.6 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 RKO90710.1 - 0.081 13.1 0.5 0.26 11.5 0.1 2.1 2 0 0 2 2 1 0 AAA domain TIP49 PF06068.13 RKO90710.1 - 0.097 11.9 1.4 0.15 11.3 0.1 1.9 2 0 0 2 2 2 0 TIP49 P-loop domain AAA_25 PF13481.6 RKO90710.1 - 0.12 11.9 0.1 0.42 10.2 0.1 1.9 1 0 0 1 1 1 0 AAA domain AAA_3 PF07726.11 RKO90710.1 - 0.12 12.2 0.0 0.35 10.7 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 RKO90710.1 - 0.14 12.2 0.0 0.3 11.1 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 RKO90710.1 - 0.28 11.7 3.0 0.48 11.0 0.1 2.3 2 0 0 2 2 2 0 ABC transporter AAA_19 PF13245.6 RKO90710.1 - 0.33 11.3 1.3 1.4 9.2 0.5 2.2 1 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 RKO90710.1 - 2.1 8.8 8.1 13 6.2 0.0 2.5 2 1 0 2 2 2 0 AAA domain zf-CCCH PF00642.24 RKO90713.1 - 0.00024 20.9 3.9 0.00045 20.1 3.9 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) TolA_bind_tri PF16331.5 RKO90713.1 - 0.007 16.4 1.9 0.007 16.4 1.9 2.6 3 0 0 3 3 3 1 TolA binding protein trimerisation zf_CCCH_4 PF18345.1 RKO90713.1 - 0.018 15.1 9.5 0.03 14.4 9.5 1.4 1 0 0 1 1 1 0 Zinc finger domain VSG_B PF13206.6 RKO90713.1 - 0.045 13.0 0.1 0.045 13.0 0.1 1.5 2 0 0 2 2 2 0 Trypanosomal VSG domain Hairpins PF04877.12 RKO90713.1 - 0.25 11.0 0.1 0.25 11.0 0.1 1.6 2 0 0 2 2 2 0 HrpZ DUF1664 PF07889.12 RKO90713.1 - 0.28 11.3 0.4 0.56 10.2 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) zf-CCCH_4 PF18044.1 RKO90713.1 - 0.65 9.9 4.3 1.1 9.2 4.3 1.4 1 0 0 1 1 1 0 CCCH-type zinc finger Atg14 PF10186.9 RKO90713.1 - 1.1 8.2 6.6 3.9 6.5 6.5 1.9 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Spc7 PF08317.11 RKO90713.1 - 7.4 5.4 8.7 4.6 6.0 3.8 1.9 1 1 0 1 1 1 0 Spc7 kinetochore protein Ribosomal_S19 PF00203.21 RKO90715.1 - 4.2e-24 84.2 0.0 4.6e-24 84.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S19 Exc PF07825.11 RKO90715.1 - 0.027 14.5 0.0 0.03 14.3 0.0 1.1 1 0 0 1 1 1 0 Excisionase-like protein Lactamase_B_2 PF12706.7 RKO90716.1 - 2.8e-22 79.2 0.0 3.7e-22 78.8 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 RKO90716.1 - 1e-07 32.1 0.0 5.6e-07 29.8 0.0 1.9 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 RKO90716.1 - 0.05 13.0 0.0 0.078 12.4 0.0 1.3 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain TPR_1 PF00515.28 RKO90717.1 - 9e-16 57.0 0.2 0.00024 20.8 0.0 4.6 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.17 RKO90717.1 - 4.3e-15 54.5 0.2 0.00092 19.1 0.0 4.5 4 1 1 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 RKO90717.1 - 1.6e-11 43.5 0.5 0.024 14.9 0.0 4.7 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 RKO90717.1 - 1.1e-10 41.9 0.1 5.8e-05 23.5 0.0 3.8 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 RKO90717.1 - 1.8e-10 40.7 0.1 0.012 16.3 0.0 4.2 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.6 RKO90717.1 - 3.7e-09 37.1 0.6 0.0017 18.9 0.0 4.1 5 1 0 5 5 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 RKO90717.1 - 2.9e-08 33.3 0.0 0.013 15.2 0.0 3.6 4 0 0 4 4 4 2 TPR repeat TPR_12 PF13424.6 RKO90717.1 - 5.7e-08 32.9 4.1 0.00036 20.8 0.3 3.5 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 RKO90717.1 - 7.1e-07 28.8 0.1 0.039 14.0 0.0 3.8 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO90717.1 - 1.5e-06 28.4 0.0 0.12 13.1 0.0 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_9 PF13371.6 RKO90717.1 - 3.8e-06 27.0 0.1 7.7e-06 26.0 0.1 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO90717.1 - 2.2e-05 24.6 0.2 0.012 15.8 0.1 3.4 2 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 RKO90717.1 - 0.0026 16.7 0.0 0.29 10.0 0.0 2.4 2 0 0 2 2 2 1 NMDA receptor-regulated protein 1 TPR_17 PF13431.6 RKO90717.1 - 0.0036 17.6 5.7 1.6 9.3 0.0 5.3 7 0 0 7 7 6 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 RKO90717.1 - 0.012 15.6 0.0 1.5 9.0 0.0 2.6 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_MalT PF17874.1 RKO90717.1 - 0.024 14.0 0.0 0.11 11.8 0.0 1.8 1 1 0 1 1 1 0 MalT-like TPR region TPR_21 PF09976.9 RKO90717.1 - 0.028 14.1 0.0 5.9 6.5 0.1 2.6 2 1 0 2 2 2 0 Tetratricopeptide repeat-like domain PPR PF01535.20 RKO90717.1 - 0.072 13.4 1.3 16 6.0 0.0 4.0 4 0 0 4 4 4 0 PPR repeat MIT PF04212.18 RKO90717.1 - 0.11 12.6 0.6 42 4.3 0.0 3.6 3 1 0 3 3 3 0 MIT (microtubule interacting and transport) domain TPR_15 PF13429.6 RKO90717.1 - 0.13 11.4 0.1 0.68 9.1 0.1 2.3 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.28 RKO90718.1 - 5.1e-13 48.2 4.5 4.3e-06 26.3 0.0 4.9 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_2 PF07719.17 RKO90718.1 - 6.1e-11 41.6 12.0 3.1e-05 23.8 0.0 5.3 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_8 PF13181.6 RKO90718.1 - 9.7e-11 41.0 3.3 1.6e-05 24.7 0.0 4.8 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 RKO90718.1 - 1.3e-08 35.0 6.1 2.2e-06 27.8 0.0 5.0 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO90718.1 - 1.5e-06 28.8 26.0 0.00021 21.9 0.0 5.7 4 1 1 5 5 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO90718.1 - 2.2e-06 27.9 4.9 0.011 16.3 0.0 5.4 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_7 PF13176.6 RKO90718.1 - 3.5e-06 26.7 6.5 0.0014 18.5 0.0 4.8 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_11 PF13414.6 RKO90718.1 - 0.00011 21.9 4.7 0.0016 18.0 0.0 3.8 2 2 1 3 3 3 2 TPR repeat TPR_19 PF14559.6 RKO90718.1 - 0.00041 20.8 0.0 0.00041 20.8 0.0 4.2 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 RKO90718.1 - 0.00046 20.4 0.1 0.071 13.5 0.0 3.7 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_9 PF13371.6 RKO90718.1 - 0.00084 19.4 1.1 0.1 12.7 0.0 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO90718.1 - 0.012 16.3 18.9 0.65 11.0 0.0 6.9 6 1 1 7 7 7 0 Tetratricopeptide repeat DUF5540 PF17694.1 RKO90718.1 - 0.032 14.7 0.3 18 5.9 0.0 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5540) HBS1_N PF08938.10 RKO90718.1 - 0.11 12.8 0.0 33 4.9 0.0 2.7 2 0 0 2 2 2 0 HBS1 N-terminus TPR_10 PF13374.6 RKO90718.1 - 2.2 8.2 5.0 41 4.2 0.0 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat Glyco_hydro_26 PF02156.15 RKO90720.1 - 1.8e-08 34.2 4.1 7.7e-06 25.6 0.0 2.4 3 0 0 3 3 3 2 Glycosyl hydrolase family 26 EF-hand_5 PF13202.6 RKO90720.1 - 0.17 11.4 0.1 0.35 10.4 0.1 1.5 1 0 0 1 1 1 0 EF hand Polysacc_deac_1 PF01522.21 RKO90722.1 - 6.2e-09 35.8 0.0 6.7e-07 29.2 0.0 2.3 1 1 1 2 2 2 2 Polysaccharide deacetylase SH3_9 PF14604.6 RKO90722.1 - 9.6e-09 35.0 0.0 1.8e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO90722.1 - 2.5e-06 27.0 0.0 4.1e-06 26.3 0.0 1.4 1 0 0 1 1 1 1 SH3 domain SKG6 PF08693.10 RKO90722.1 - 0.0094 15.3 0.2 0.019 14.3 0.2 1.5 1 0 0 1 1 1 1 Transmembrane alpha-helix domain Oxidored_nitro PF00148.19 RKO90722.1 - 0.033 12.9 0.0 0.045 12.5 0.0 1.1 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Tub_N PF16322.5 RKO90723.1 - 0.013 15.9 3.1 0.02 15.3 3.1 1.3 1 0 0 1 1 1 0 Tubby N-terminal Spore_coat_CotO PF14153.6 RKO90723.1 - 0.31 10.9 5.2 0.52 10.2 5.2 1.3 1 0 0 1 1 1 0 Spore coat protein CotO OAD_gamma PF04277.13 RKO90723.1 - 3.7 8.2 4.6 16 6.2 4.6 2.1 1 1 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain XRN_N PF03159.18 RKO90726.1 - 1.1e-29 103.6 0.0 2e-29 102.7 0.0 1.4 1 0 0 1 1 1 1 XRN 5'-3' exonuclease N-terminus XRN_M PF17846.1 RKO90726.1 - 0.0044 16.0 0.0 2.2 7.1 0.0 2.1 2 0 0 2 2 2 2 Xrn1 helical domain WD40 PF00400.32 RKO90731.1 - 1.5e-17 63.6 0.9 1.6e-06 28.7 0.0 3.3 3 0 0 3 3 3 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO90731.1 - 3.1e-06 27.4 0.0 0.18 12.1 0.0 3.1 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 RKO90731.1 - 0.00011 21.3 0.1 0.072 12.0 0.0 2.5 2 1 1 3 3 3 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Nbas_N PF15492.6 RKO90731.1 - 0.0063 15.9 0.0 0.04 13.3 0.0 1.9 1 1 1 2 2 2 1 Neuroblastoma-amplified sequence, N terminal PQQ_3 PF13570.6 RKO90731.1 - 0.0069 16.8 6.2 0.044 14.3 0.5 3.4 2 1 1 3 3 3 1 PQQ-like domain Cytochrom_D1 PF02239.16 RKO90731.1 - 0.007 14.9 0.0 0.0098 14.5 0.0 1.1 1 0 0 1 1 1 1 Cytochrome D1 heme domain Nup160 PF11715.8 RKO90731.1 - 0.016 13.9 0.0 0.021 13.5 0.0 1.2 1 0 0 1 1 1 0 Nucleoporin Nup120/160 ALG3 PF05208.13 RKO90732.1 - 3.1e-116 388.7 19.8 3.7e-116 388.5 19.8 1.1 1 0 0 1 1 1 1 ALG3 protein Pox_A_type_inc PF04508.12 RKO90733.1 - 0.14 12.1 0.1 0.29 11.1 0.1 1.5 1 0 0 1 1 1 0 Viral A-type inclusion protein repeat CytochromB561_N PF09786.9 RKO90736.1 - 8.7e-09 34.9 5.4 2.9e-05 23.3 0.0 2.7 3 0 0 3 3 3 2 Cytochrome B561, N terminal NPCC PF08058.11 RKO90736.1 - 2.7e-08 33.9 0.0 4.4e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 Nuclear pore complex component F-box-like PF12937.7 RKO90737.1 - 0.28 11.1 0.2 0.28 11.1 0.2 2.0 2 0 0 2 2 2 0 F-box-like LysM PF01476.20 RKO90738.1 - 3e-06 27.2 0.0 4.7e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 LysM domain APG6_N PF17675.1 RKO90739.1 - 0.014 15.9 0.6 0.018 15.6 0.6 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region AAA_23 PF13476.6 RKO90739.1 - 0.027 15.0 1.9 0.032 14.7 1.9 1.1 1 0 0 1 1 1 0 AAA domain DUF1664 PF07889.12 RKO90739.1 - 0.051 13.6 0.5 0.073 13.1 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) KELK PF15796.5 RKO90739.1 - 0.067 13.7 3.2 0.1 13.0 3.2 1.3 1 0 0 1 1 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase FlaC_arch PF05377.11 RKO90739.1 - 0.12 12.8 1.8 0.21 12.0 0.7 1.9 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Gpr1_Fun34_YaaH PF01184.19 RKO90742.1 - 2.8e-12 46.7 0.2 3.3e-12 46.5 0.2 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family DUF2393 PF09624.10 RKO90742.1 - 0.42 10.6 1.7 0.57 10.2 1.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2393) Asp PF00026.23 RKO90743.1 - 3.4e-28 99.0 7.9 1.9e-27 96.5 7.9 1.8 1 1 0 1 1 1 1 Eukaryotic aspartyl protease Nop14 PF04147.12 RKO90744.1 - 5.9e-40 137.3 2.8 6.4e-40 137.2 2.8 1.0 1 0 0 1 1 1 1 Nop14-like family CBF PF03914.17 RKO90745.1 - 2.3e-13 50.5 6.5 4.9e-12 46.2 0.5 3.4 3 1 0 3 3 3 2 CBF/Mak21 family Q_salvage PF10343.9 RKO90745.1 - 0.13 11.8 0.2 0.21 11.1 0.2 1.2 1 0 0 1 1 1 0 Potential Queuosine, Q, salvage protein family RNA_pol_Rpb1_2 PF00623.20 RKO90746.1 - 5.1e-65 218.7 0.1 8.4e-65 218.0 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_5 PF04998.17 RKO90746.1 - 9.6e-54 182.6 0.0 1.4e-53 182.0 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_3 PF04983.18 RKO90746.1 - 3.8e-32 111.4 0.0 7.8e-32 110.4 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_1 PF04997.12 RKO90746.1 - 2.9e-28 99.1 0.0 1.3e-26 93.7 0.0 3.0 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_4 PF05000.17 RKO90746.1 - 7.4e-23 80.6 0.0 1.9e-22 79.3 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 CTP_transf_like PF01467.26 RKO90749.1 - 5.5e-07 29.9 0.0 6.5e-07 29.6 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase-like FAT PF02259.23 RKO90751.1 - 6.7e-125 416.9 2.6 8.6e-125 416.5 0.3 2.3 2 0 0 2 2 2 1 FAT domain DUF3385 PF11865.8 RKO90751.1 - 1.8e-63 213.3 1.4 8.9e-59 198.0 0.0 4.2 4 1 0 4 4 4 2 Domain of unknown function (DUF3385) FRB_dom PF08771.11 RKO90751.1 - 2.4e-46 156.2 1.4 8.4e-46 154.4 0.3 2.7 2 0 0 2 2 1 1 FKBP12-rapamycin binding domain HEAT_2 PF13646.6 RKO90751.1 - 3e-20 72.4 1.8 0.0056 17.0 0.0 8.3 6 1 2 8 8 8 4 HEAT repeats PI3_PI4_kinase PF00454.27 RKO90751.1 - 3.5e-20 72.9 0.3 7.3e-20 71.8 0.0 1.7 2 0 0 2 2 2 1 Phosphatidylinositol 3- and 4-kinase HEAT PF02985.22 RKO90751.1 - 2.6e-14 52.1 3.7 0.00097 19.2 0.0 9.3 9 0 0 9 9 9 2 HEAT repeat HEAT_EZ PF13513.6 RKO90751.1 - 4.1e-08 33.5 32.8 0.0044 17.5 0.1 11.6 13 1 1 14 14 13 3 HEAT-like repeat Cnd1 PF12717.7 RKO90751.1 - 4.3e-07 30.1 2.9 0.0015 18.6 0.2 5.3 4 1 2 6 6 6 2 non-SMC mitotic condensation complex subunit 1 IFRD PF05004.13 RKO90751.1 - 0.00034 19.8 0.0 2 7.5 0.0 4.7 3 2 2 5 5 5 2 Interferon-related developmental regulator (IFRD) TPR_19 PF14559.6 RKO90751.1 - 0.00041 20.8 1.2 1.8 9.1 0.1 3.8 4 0 0 4 4 3 2 Tetratricopeptide repeat Adaptin_N PF01602.20 RKO90751.1 - 0.0044 15.6 10.1 0.2 10.2 0.9 3.7 2 1 1 3 3 3 2 Adaptin N terminal region Baculo_PEP_C PF04513.12 RKO90751.1 - 0.027 14.5 0.0 2.7 8.0 0.0 3.1 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Vac14_Fab1_bd PF12755.7 RKO90751.1 - 0.027 15.0 2.2 70 4.1 0.0 6.0 6 1 0 6 6 6 0 Vacuolar 14 Fab1-binding region TPR_16 PF13432.6 RKO90751.1 - 0.046 14.4 6.6 3.1 8.5 0.1 4.5 4 0 0 4 4 3 0 Tetratricopeptide repeat Tti2 PF10521.9 RKO90751.1 - 0.11 12.0 3.0 3 7.3 0.0 3.9 3 2 1 4 4 4 0 Tti2 family ANAPC3 PF12895.7 RKO90751.1 - 0.25 11.6 1.1 17 5.8 0.1 3.6 3 0 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 Sec7_N PF12783.7 RKO90751.1 - 0.3 11.0 3.9 18 5.2 0.0 4.9 2 2 1 3 3 3 0 Guanine nucleotide exchange factor in Golgi transport N-terminal peroxidase PF00141.23 RKO90752.1 - 0.0034 17.1 0.0 0.0048 16.6 0.0 1.3 1 0 0 1 1 1 1 Peroxidase NAD_binding_6 PF08030.12 RKO90753.1 - 1.6e-11 44.6 0.0 2.9e-11 43.7 0.0 1.4 1 1 0 1 1 1 1 Ferric reductase NAD binding domain FAD_binding_8 PF08022.12 RKO90753.1 - 8.1e-10 38.8 0.0 1.7e-09 37.7 0.0 1.5 1 0 0 1 1 1 1 FAD-binding domain Ferric_reduct PF01794.19 RKO90753.1 - 2e-05 24.7 2.7 3.8e-05 23.8 2.7 1.5 1 0 0 1 1 1 1 Ferric reductase like transmembrane component Fez1 PF06818.15 RKO90755.1 - 0.00024 21.6 6.2 0.00034 21.1 6.2 1.3 1 0 0 1 1 1 1 Fez1 HMMR_N PF15905.5 RKO90755.1 - 0.00083 18.9 8.3 0.0029 17.2 8.3 1.7 1 1 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Filament PF00038.21 RKO90755.1 - 0.0012 18.5 10.5 0.0017 18.0 10.5 1.1 1 0 0 1 1 1 1 Intermediate filament protein UPF0242 PF06785.11 RKO90755.1 - 0.0016 18.6 6.2 0.0016 18.6 6.2 1.8 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0242) N-terminus CENP-F_leu_zip PF10473.9 RKO90755.1 - 0.0017 18.4 10.4 0.0065 16.5 9.7 2.2 1 1 1 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TMCO5 PF14992.6 RKO90755.1 - 0.0058 16.2 8.7 0.041 13.5 4.9 2.0 1 1 1 2 2 2 1 TMCO5 family Laminin_II PF06009.12 RKO90755.1 - 0.0071 16.4 2.7 0.087 12.8 0.5 2.0 1 1 1 2 2 2 1 Laminin Domain II MPS2 PF17060.5 RKO90755.1 - 0.011 15.1 7.1 0.014 14.7 7.1 1.3 1 0 0 1 1 1 0 Monopolar spindle protein 2 Cep57_MT_bd PF06657.13 RKO90755.1 - 0.014 15.8 4.8 3.3 8.2 0.1 2.7 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 ADIP PF11559.8 RKO90755.1 - 0.015 15.4 3.2 0.015 15.4 3.2 1.4 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding DUF4407 PF14362.6 RKO90755.1 - 0.018 14.4 1.7 0.021 14.2 1.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF1857 PF08982.11 RKO90755.1 - 0.034 14.0 0.1 0.053 13.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1857) GAS PF13851.6 RKO90755.1 - 0.055 12.8 12.5 0.15 11.4 6.2 2.1 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding KASH_CCD PF14662.6 RKO90755.1 - 0.057 13.2 8.5 0.081 12.7 8.5 1.3 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH MAP70 PF07058.11 RKO90755.1 - 0.092 11.5 10.8 0.47 9.1 10.4 1.7 1 1 1 2 2 2 0 Microtubule-associated protein 70 CENP-H PF05837.12 RKO90755.1 - 0.13 12.7 5.9 2.2 8.8 0.3 2.4 1 1 1 2 2 2 0 Centromere protein H (CENP-H) ATG16 PF08614.11 RKO90755.1 - 0.18 12.0 9.2 0.48 10.6 2.2 2.1 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) BLOC1_2 PF10046.9 RKO90755.1 - 0.23 11.8 6.8 8.3 6.8 3.5 2.2 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FAM76 PF16046.5 RKO90755.1 - 0.37 10.1 8.9 1.1 8.6 8.9 1.8 1 1 0 1 1 1 0 FAM76 protein DUF724 PF05266.14 RKO90755.1 - 0.48 10.2 8.9 0.29 10.9 3.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Ax_dynein_light PF10211.9 RKO90755.1 - 0.48 10.3 12.0 0.18 11.7 5.0 2.2 1 1 1 2 2 2 0 Axonemal dynein light chain TMF_DNA_bd PF12329.8 RKO90755.1 - 0.51 10.4 14.0 0.38 10.8 8.0 2.8 1 1 2 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF641 PF04859.12 RKO90755.1 - 1.2 9.4 7.5 2.5 8.5 3.6 2.5 2 1 0 2 2 2 0 Plant protein of unknown function (DUF641) Atg14 PF10186.9 RKO90755.1 - 1.4 8.0 7.8 7.4 5.5 7.9 1.8 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 BST2 PF16716.5 RKO90755.1 - 1.7 9.3 5.8 4.2 8.0 0.1 2.6 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 APG6_N PF17675.1 RKO90755.1 - 2.7 8.5 11.2 5.3 7.6 8.5 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region bZIP_1 PF00170.21 RKO90755.1 - 3.9 7.7 8.4 19 5.4 0.1 2.9 2 1 0 3 3 3 0 bZIP transcription factor DivIC PF04977.15 RKO90755.1 - 5.6 6.8 12.5 10 6.0 3.0 3.3 2 2 1 3 3 3 0 Septum formation initiator DUF4200 PF13863.6 RKO90755.1 - 10 6.6 18.1 43 4.5 13.7 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) WD40 PF00400.32 RKO90756.1 - 3.4e-06 27.7 3.5 0.0016 19.2 0.1 4.9 5 1 0 5 5 5 1 WD domain, G-beta repeat BBS2_Mid PF14783.6 RKO90756.1 - 0.14 12.2 0.0 0.66 10.0 0.0 2.1 2 0 0 2 2 2 0 Ciliary BBSome complex subunit 2, middle region HgmA PF04209.13 RKO90757.1 - 9.2e-214 709.9 0.0 1e-213 709.7 0.0 1.0 1 0 0 1 1 1 1 homogentisate 1,2-dioxygenase Homeodomain PF00046.29 RKO90758.1 - 1.2e-13 50.7 0.7 1.3e-13 50.6 0.7 1.0 1 0 0 1 1 1 1 Homeodomain Homeobox_KN PF05920.11 RKO90758.1 - 0.0049 16.7 0.5 0.0077 16.1 0.2 1.5 2 0 0 2 2 2 1 Homeobox KN domain NPR2 PF06218.11 RKO90759.1 - 2.7e-25 89.0 0.2 2.9e-25 88.9 0.2 1.0 1 0 0 1 1 1 1 Nitrogen permease regulator 2 tRNA_m1G_MT PF01746.21 RKO90759.1 - 0.11 12.2 0.0 0.13 11.9 0.0 1.1 1 0 0 1 1 1 0 tRNA (Guanine-1)-methyltransferase 2-oxoacid_dh PF00198.23 RKO90760.1 - 6.7e-82 274.4 0.9 8.7e-82 274.0 0.9 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 RKO90760.1 - 1.3e-12 47.3 0.0 3e-12 46.2 0.0 1.7 1 0 0 1 1 1 1 Biotin-requiring enzyme Ribosomal_60s PF00428.19 RKO90760.1 - 0.024 15.2 8.1 0.024 15.2 8.1 2.5 2 1 0 2 2 2 0 60s Acidic ribosomal protein GlyL_C PF12524.8 RKO90760.1 - 0.036 14.2 0.2 0.077 13.1 0.2 1.5 1 0 0 1 1 1 0 dsDNA virus glycoprotein L C terminal GCV_H PF01597.19 RKO90760.1 - 0.1 12.5 0.1 0.24 11.3 0.1 1.6 1 0 0 1 1 1 0 Glycine cleavage H-protein BioT2 PF15368.6 RKO90760.1 - 0.14 12.2 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 Spermatogenesis family BioT2 TPR_1 PF00515.28 RKO90761.1 - 8.5e-17 60.2 7.5 3.3e-05 23.5 0.1 4.1 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.17 RKO90761.1 - 2.3e-15 55.4 4.5 0.00066 19.6 0.1 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.6 RKO90761.1 - 5.1e-11 43.0 6.4 2e-07 31.5 1.4 2.8 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 RKO90761.1 - 2.3e-09 36.7 1.1 0.021 15.0 0.0 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 RKO90761.1 - 5e-09 36.2 1.5 0.017 15.7 0.1 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_9 PF13371.6 RKO90761.1 - 3.8e-08 33.4 5.6 0.0022 18.1 0.2 2.5 1 1 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 RKO90761.1 - 2.6e-07 30.8 5.0 0.00063 20.0 0.9 3.3 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 RKO90761.1 - 8e-07 28.6 6.5 0.00028 20.5 0.8 4.1 3 1 1 4 4 4 2 TPR repeat TPR_14 PF13428.6 RKO90761.1 - 5.2e-06 26.8 8.3 0.0045 17.7 0.3 4.2 2 2 2 4 4 4 2 Tetratricopeptide repeat BTAD PF03704.17 RKO90761.1 - 0.00074 20.0 0.3 0.084 13.3 0.0 2.1 2 0 0 2 2 2 1 Bacterial transcriptional activator domain TPR_17 PF13431.6 RKO90761.1 - 0.00078 19.7 5.7 0.0036 17.6 0.4 3.4 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 RKO90761.1 - 0.00086 19.8 8.3 0.0013 19.2 2.6 3.0 2 2 1 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.6 RKO90761.1 - 0.0031 17.3 1.3 8.6 6.4 0.1 4.4 3 2 1 4 4 4 1 Tetratricopeptide repeat ANAPC5 PF12862.7 RKO90761.1 - 0.53 10.4 2.6 43 4.3 0.8 3.0 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 5 S10_plectin PF03501.15 RKO90763.1 - 1.4e-44 150.1 0.1 1.7e-44 149.8 0.1 1.0 1 0 0 1 1 1 1 Plectin/S10 domain TrmB PF01978.19 RKO90763.1 - 0.042 13.8 0.0 0.074 12.9 0.0 1.6 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Kinase-like PF14531.6 RKO90763.1 - 0.062 12.6 0.0 0.064 12.6 0.0 1.1 1 0 0 1 1 1 0 Kinase-like Bd3614-deam PF14439.6 RKO90764.1 - 0.085 12.9 1.8 0.14 12.2 1.8 1.3 1 0 0 1 1 1 0 Bd3614-like deaminase RPOL_N PF14700.6 RKO90765.1 - 1.3e-26 93.8 0.1 2.3e-26 93.0 0.1 1.3 1 0 0 1 1 1 1 DNA-directed RNA polymerase N-terminal OPT PF03169.15 RKO90766.1 - 4.9e-139 464.8 38.1 5.9e-139 464.5 38.1 1.1 1 0 0 1 1 1 1 OPT oligopeptide transporter protein Ammonium_transp PF00909.21 RKO90771.1 - 2.8e-114 381.9 32.8 3.2e-114 381.7 32.8 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family KH_6 PF15985.5 RKO90772.1 - 6e-15 55.3 0.0 1.1e-14 54.5 0.0 1.4 1 0 0 1 1 1 1 KH domain Rrp40_N PF18311.1 RKO90772.1 - 1.5e-06 28.0 0.3 3.9e-06 26.7 0.3 1.7 1 0 0 1 1 1 1 Exosome complex exonuclease Rrp40 N-terminal domain RhoGAP PF00620.27 RKO90773.1 - 7e-32 110.4 0.0 1.1e-31 109.7 0.0 1.3 1 0 0 1 1 1 1 RhoGAP domain CRAL_TRIO_2 PF13716.6 RKO90773.1 - 4e-28 98.3 0.3 7.1e-28 97.5 0.3 1.4 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain CRAL_TRIO PF00650.20 RKO90773.1 - 2.4e-05 24.1 0.2 4.1e-05 23.3 0.2 1.3 1 0 0 1 1 1 1 CRAL/TRIO domain cNMP_binding PF00027.29 RKO90774.1 - 1.7e-06 28.0 0.1 3.7e-06 26.9 0.1 1.6 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain PepSY_TM PF03929.16 RKO90774.1 - 0.017 14.8 0.0 0.037 13.7 0.0 1.6 1 0 0 1 1 1 0 PepSY-associated TM region Ion_trans_2 PF07885.16 RKO90774.1 - 9.4 6.3 10.8 0.096 12.7 2.3 2.1 3 0 0 3 3 3 0 Ion channel DUF4401 PF14351.6 RKO90777.1 - 0.058 12.7 0.1 0.063 12.6 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4401) DNA_pol_phi PF04931.13 RKO90778.1 - 3 5.8 9.6 3.8 5.5 9.6 1.0 1 0 0 1 1 1 0 DNA polymerase phi CBM_10 PF02013.16 RKO90780.1 - 4.4e-06 27.1 2.4 0.1 13.1 0.1 2.9 2 1 0 2 2 2 2 Cellulose or protein binding domain E1-E2_ATPase PF00122.20 RKO90783.1 - 1.9e-44 151.3 1.1 3.2e-44 150.6 1.1 1.4 1 0 0 1 1 1 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 RKO90783.1 - 2.8e-19 69.5 12.1 4.2e-12 46.1 3.4 3.3 3 0 0 3 3 3 2 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 RKO90783.1 - 1.3e-14 55.0 1.2 1.9e-07 31.6 0.5 3.1 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 RKO90783.1 - 2.7e-14 53.0 0.0 5e-14 52.2 0.0 1.4 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 RKO90783.1 - 4.2e-11 42.4 0.0 8.2e-11 41.4 0.0 1.5 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 RKO90783.1 - 0.0021 17.9 1.3 0.2 11.4 0.9 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase MgtE PF01769.16 RKO90783.1 - 0.23 11.9 4.0 13 6.2 0.3 2.8 2 0 0 2 2 2 0 Divalent cation transporter MMR_HSR1 PF01926.23 RKO90787.1 - 1.9e-16 60.1 0.1 4.2e-15 55.8 0.0 2.3 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 RKO90787.1 - 3.3e-07 30.0 0.1 7.7e-06 25.5 0.0 2.3 2 0 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 RKO90787.1 - 3.6e-06 27.0 0.0 0.00016 21.6 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase Dynamin_N PF00350.23 RKO90787.1 - 0.00021 21.4 3.5 0.0083 16.2 0.1 3.1 3 0 0 3 3 3 1 Dynamin family TRAP_alpha PF03896.16 RKO90787.1 - 0.0099 15.1 1.4 0.014 14.6 1.4 1.1 1 0 0 1 1 1 1 Translocon-associated protein (TRAP), alpha subunit cobW PF02492.19 RKO90787.1 - 0.023 14.3 0.0 0.14 11.7 0.0 2.1 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AIG1 PF04548.16 RKO90787.1 - 0.025 13.9 0.1 0.091 12.1 0.1 1.9 2 0 0 2 2 2 0 AIG1 family DUF2457 PF10446.9 RKO90787.1 - 8.8 5.3 14.6 12 5.0 14.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) CCDC84 PF14968.6 RKO90788.1 - 3.7e-28 99.2 5.1 3.9e-28 99.1 5.1 1.0 1 0 0 1 1 1 1 Coiled coil protein 84 TPR_17 PF13431.6 RKO90791.1 - 0.00037 20.7 0.4 2.7 8.6 0.0 4.2 4 1 0 4 4 4 1 Tetratricopeptide repeat TPR_19 PF14559.6 RKO90791.1 - 0.00067 20.1 7.6 0.86 10.2 0.1 4.4 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 RKO90791.1 - 0.011 15.8 0.8 8.5 6.8 0.1 4.4 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_1 PF00515.28 RKO90791.1 - 0.041 13.7 0.3 5.6 6.9 0.0 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 RKO90791.1 - 0.048 13.9 0.4 23 5.5 0.2 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO90791.1 - 0.14 13.1 8.9 22 6.2 0.1 5.5 2 1 3 5 5 5 0 Tetratricopeptide repeat TPR_6 PF13174.6 RKO90791.1 - 0.23 12.2 2.0 74 4.3 0.1 4.0 3 0 0 3 3 3 0 Tetratricopeptide repeat LAP1C PF05609.12 RKO90791.1 - 4 6.4 16.5 7.9 5.5 16.5 1.4 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) V_ATPase_I PF01496.19 RKO90791.1 - 6.5 4.5 10.1 9.5 4.0 10.1 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Borrelia_P83 PF05262.11 RKO90791.1 - 8.5 4.7 21.1 11 4.4 21.1 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein GREB1 PF15782.5 RKO90791.1 - 9.9 3.1 6.7 14 2.6 6.7 1.1 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer HEAT PF02985.22 RKO90792.1 - 0.12 12.7 0.0 0.28 11.5 0.0 1.6 1 0 0 1 1 1 0 HEAT repeat zf-C3HC4 PF00097.25 RKO90794.1 - 0.0012 18.6 0.4 0.0023 17.7 0.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 RKO90794.1 - 0.042 13.7 0.5 0.089 12.6 0.5 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 RKO90794.1 - 0.23 11.5 4.0 0.4 10.8 4.0 1.4 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_2 PF13639.6 RKO90794.1 - 0.28 11.6 2.8 0.51 10.7 2.8 1.4 1 0 0 1 1 1 0 Ring finger domain RRM_1 PF00076.22 RKO90795.1 - 7.6e-82 269.1 2.8 2.5e-21 75.2 0.3 4.2 4 0 0 4 4 4 4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PABP PF00658.18 RKO90795.1 - 3.4e-27 94.4 0.1 1.7e-26 92.2 0.1 2.2 2 0 0 2 2 2 1 Poly-adenylate binding protein, unique domain RRM_5 PF13893.6 RKO90795.1 - 2e-11 43.6 0.1 0.025 14.2 0.0 4.1 1 1 2 4 4 4 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 RKO90795.1 - 5e-05 23.3 0.7 1.9 8.6 0.0 4.8 4 1 0 4 4 4 1 RNA recognition motif Nup35_RRM_2 PF14605.6 RKO90795.1 - 0.00012 22.0 1.2 13 5.9 0.0 4.3 4 0 0 4 4 4 1 Nup53/35/40-type RNA recognition motif Limkain-b1 PF11608.8 RKO90795.1 - 0.00015 21.8 1.8 1 9.5 0.4 3.6 3 0 0 3 3 3 2 Limkain b1 SET_assoc PF11767.8 RKO90795.1 - 0.0028 17.2 0.1 22 4.8 0.0 3.4 3 0 0 3 3 3 0 Histone lysine methyltransferase SET associated DUF4078 PF13300.6 RKO90795.1 - 0.003 17.8 7.1 0.003 17.8 7.1 3.8 5 0 0 5 5 5 1 Domain of unknown function (DUF4078) YflT PF11181.8 RKO90795.1 - 0.004 17.6 4.6 0.23 12.0 1.8 2.7 3 0 0 3 3 3 1 Heat induced stress protein YflT RRM_occluded PF16842.5 RKO90795.1 - 0.035 13.9 0.0 4.1 7.3 0.0 2.8 3 0 0 3 3 3 0 Occluded RNA-recognition motif DUF4523 PF15023.6 RKO90795.1 - 0.048 13.5 0.0 51 3.6 0.0 3.4 3 1 0 3 3 3 0 Protein of unknown function (DUF4523) RRM_3 PF08777.11 RKO90795.1 - 0.24 11.5 11.8 2.5 8.2 4.5 3.4 1 1 1 3 3 3 0 RNA binding motif RAMP4 PF06624.12 RKO90796.1 - 6 7.0 6.4 13 5.9 6.4 1.5 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 La PF05383.17 RKO90797.1 - 3.6e-15 55.8 0.0 6.4e-15 54.9 0.0 1.4 1 0 0 1 1 1 1 La domain UMP1 PF05348.11 RKO90801.1 - 1.4e-37 128.6 0.1 1.5e-37 128.4 0.1 1.0 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 ATP_bind_1 PF03029.17 RKO90802.1 - 1.5e-82 277.0 0.0 1.8e-82 276.8 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_33 PF13671.6 RKO90802.1 - 0.0032 17.7 0.0 0.0047 17.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain SRP54 PF00448.22 RKO90802.1 - 0.0037 16.9 0.0 0.006 16.2 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain cobW PF02492.19 RKO90802.1 - 0.0049 16.5 0.0 0.087 12.4 0.0 2.1 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 RKO90802.1 - 0.006 16.9 0.0 0.016 15.4 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 RKO90802.1 - 0.009 15.7 0.0 0.019 14.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 RKO90802.1 - 0.014 15.8 0.1 0.026 14.9 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 RKO90802.1 - 0.028 14.8 0.0 0.051 14.0 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 RKO90802.1 - 0.061 13.0 0.0 0.13 12.0 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 RKO90802.1 - 0.088 13.4 0.0 0.42 11.2 0.0 2.2 3 0 0 3 3 3 0 AAA domain AAA_14 PF13173.6 RKO90802.1 - 0.093 12.8 0.0 0.23 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 RKO90802.1 - 0.095 13.1 0.0 0.2 12.0 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain AAA_7 PF12775.7 RKO90802.1 - 0.12 11.9 0.0 0.42 10.1 0.0 1.8 2 0 0 2 2 2 0 P-loop containing dynein motor region MMR_HSR1 PF01926.23 RKO90802.1 - 0.14 12.2 0.0 1.8 8.7 0.0 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase Hydin_ADK PF17213.3 RKO90802.1 - 0.16 12.3 0.0 0.23 11.7 0.0 1.2 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain KTI12 PF08433.10 RKO90802.1 - 0.17 11.3 0.0 0.26 10.7 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AP_endonuc_2 PF01261.24 RKO90802.1 - 0.17 11.3 0.0 0.51 9.7 0.0 1.7 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel Pam16 PF03656.13 RKO90803.1 - 1.5e-34 118.7 1.0 1.7e-34 118.6 1.0 1.0 1 0 0 1 1 1 1 Pam16 DnaJ PF00226.31 RKO90803.1 - 0.026 14.6 0.1 0.042 14.0 0.1 1.4 1 0 0 1 1 1 0 DnaJ domain MRP-L20 PF12824.7 RKO90804.1 - 8.1e-14 52.1 0.1 8.6e-14 52.0 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial ribosomal protein subunit L20 Neugrin PF06413.11 RKO90804.1 - 0.015 15.4 0.0 0.019 15.0 0.0 1.3 1 0 0 1 1 1 0 Neugrin peroxidase PF00141.23 RKO90805.1 - 6.3e-20 71.8 0.0 8.5e-20 71.4 0.0 1.1 1 0 0 1 1 1 1 Peroxidase SMC_N PF02463.19 RKO90806.1 - 0.014 14.8 0.2 0.016 14.7 0.2 1.0 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain TrkA_C PF02080.21 RKO90806.1 - 0.025 14.4 0.5 0.031 14.1 0.5 1.1 1 0 0 1 1 1 0 TrkA-C domain Oxidored_FMN PF00724.20 RKO90807.1 - 7.1e-57 193.2 0.0 1.5e-56 192.1 0.0 1.5 1 1 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family LRR_4 PF12799.7 RKO90808.1 - 0.0016 18.8 1.3 0.012 16.0 0.6 2.9 3 1 1 4 4 4 1 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 RKO90808.1 - 0.19 12.4 2.0 45 5.2 0.2 4.2 4 0 0 4 4 4 0 Leucine Rich Repeat F-box-like PF12937.7 RKO90809.1 - 4e-06 26.6 0.3 9.3e-06 25.4 0.3 1.6 1 0 0 1 1 1 1 F-box-like EF-hand_7 PF13499.6 RKO90810.1 - 1.8e-14 54.0 0.0 6.2e-09 36.2 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 RKO90810.1 - 6.5e-10 38.1 0.0 9e-06 25.2 0.0 3.0 4 0 0 4 4 4 2 EF-hand domain EF-hand_1 PF00036.32 RKO90810.1 - 1.9e-06 27.0 0.3 4.7e-05 22.7 0.0 2.9 4 0 0 4 4 4 1 EF hand EF-hand_9 PF14658.6 RKO90810.1 - 9.4e-06 25.9 0.0 0.0091 16.3 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_8 PF13833.6 RKO90810.1 - 6.8e-05 22.6 0.0 0.01 15.7 0.0 3.3 2 1 2 4 4 4 2 EF-hand domain pair EFhand_Ca_insen PF08726.10 RKO90810.1 - 0.0028 17.7 0.1 0.035 14.2 0.0 2.2 2 0 0 2 2 2 1 Ca2+ insensitive EF hand EF-hand_5 PF13202.6 RKO90810.1 - 0.014 14.9 1.8 0.019 14.4 0.0 2.2 3 0 0 3 3 3 0 EF hand Skp1 PF01466.19 RKO90810.1 - 0.23 11.6 1.6 0.3 11.2 0.2 1.9 2 0 0 2 2 2 0 Skp1 family, dimerisation domain Fungal_trans PF04082.18 RKO90811.1 - 4.1e-27 94.9 0.0 6.7e-27 94.2 0.0 1.3 1 0 0 1 1 1 1 Fungal specific transcription factor domain FAM176 PF14851.6 RKO90811.1 - 0.2 11.3 0.3 0.51 10.0 0.3 1.6 1 0 0 1 1 1 0 FAM176 family Trypan_PARP PF05887.11 RKO90813.1 - 0.00054 19.9 8.9 0.00054 19.9 8.9 2.5 3 0 0 3 3 3 1 Procyclic acidic repetitive protein (PARP) Neisseria_TspB PF05616.13 RKO90813.1 - 0.04 12.4 14.0 0.067 11.7 14.0 1.3 1 0 0 1 1 1 0 Neisseria meningitidis TspB protein Fer2_3 PF13085.6 RKO90814.1 - 1.6e-32 111.7 0.0 2.5e-32 111.1 0.0 1.3 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_17 PF13534.6 RKO90814.1 - 9.4e-10 38.9 5.4 9.4e-10 38.9 5.4 2.1 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 RKO90814.1 - 7.6e-07 29.5 6.6 7.6e-07 29.5 6.6 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 RKO90814.1 - 2.8e-06 27.4 3.2 2.8e-06 27.4 3.2 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer2 PF00111.27 RKO90814.1 - 0.00019 21.3 1.3 0.0069 16.3 0.2 2.4 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_9 PF13187.6 RKO90814.1 - 0.013 15.6 5.3 0.013 15.6 5.3 2.3 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 RKO90814.1 - 0.029 15.0 7.7 0.029 15.0 7.7 2.4 2 2 0 2 2 2 0 4Fe-4S dicluster domain TIG PF01833.24 RKO90815.1 - 7.3e-12 45.2 1.0 2e-11 43.8 1.0 1.8 1 0 0 1 1 1 1 IPT/TIG domain Kelch_4 PF13418.6 RKO90817.1 - 2.4e-14 53.1 12.9 7.5e-07 29.1 0.2 4.4 3 1 1 4 4 4 3 Galactose oxidase, central domain Kelch_3 PF13415.6 RKO90817.1 - 6.8e-09 35.8 12.1 3.6e-05 23.9 0.7 4.5 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO90817.1 - 5.2e-08 32.3 4.4 0.17 11.5 0.0 4.5 4 0 0 4 4 4 3 Kelch motif Kelch_6 PF13964.6 RKO90817.1 - 9.2e-07 28.9 7.1 0.79 10.1 0.1 4.6 3 1 1 4 4 4 3 Kelch motif Kelch_5 PF13854.6 RKO90817.1 - 2.7e-05 24.0 5.2 0.085 12.9 0.0 4.0 4 0 0 4 4 4 2 Kelch motif Kelch_2 PF07646.15 RKO90817.1 - 0.0006 19.7 1.3 1.7 8.7 0.1 3.6 3 0 0 3 3 3 2 Kelch motif Herpes_gE PF02480.16 RKO90817.1 - 0.14 10.9 0.0 0.21 10.3 0.0 1.2 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E TAF8_C PF10406.9 RKO90818.1 - 0.00059 20.3 0.0 16 6.2 0.0 3.9 4 0 0 4 4 4 2 Transcription factor TFIID complex subunit 8 C-term DnaJ PF00226.31 RKO90819.1 - 1.1e-20 73.5 0.8 1.3e-19 70.1 0.1 2.9 2 0 0 2 2 2 1 DnaJ domain TPR_1 PF00515.28 RKO90819.1 - 1.3e-18 65.9 0.3 4.1e-05 23.2 0.3 6.2 7 0 0 7 7 6 3 Tetratricopeptide repeat TPR_2 PF07719.17 RKO90819.1 - 6e-15 54.1 14.2 0.00087 19.2 0.4 7.6 8 0 0 8 8 7 3 Tetratricopeptide repeat TPR_9 PF13371.6 RKO90819.1 - 1.5e-13 50.7 4.7 9.2e-06 25.7 0.3 4.6 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.6 RKO90819.1 - 2.8e-13 50.2 11.8 0.0024 18.3 0.1 6.2 4 2 2 6 6 6 3 Tetratricopeptide repeat TPR_8 PF13181.6 RKO90819.1 - 6.4e-12 44.7 1.8 0.39 11.0 0.1 5.7 6 0 0 6 6 5 4 Tetratricopeptide repeat TPR_11 PF13414.6 RKO90819.1 - 4.7e-10 39.0 5.2 0.0098 15.6 0.1 6.2 5 2 3 8 8 7 3 TPR repeat TPR_14 PF13428.6 RKO90819.1 - 5.1e-10 39.3 16.0 0.0025 18.5 0.3 6.7 5 2 3 8 8 6 2 Tetratricopeptide repeat TPR_17 PF13431.6 RKO90819.1 - 1e-08 34.9 1.7 1.6 9.3 0.0 6.4 7 0 0 7 7 5 2 Tetratricopeptide repeat TPR_15 PF13429.6 RKO90819.1 - 3.3e-07 29.8 1.9 0.3 10.3 0.0 4.6 2 1 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 RKO90819.1 - 4.4e-07 30.1 4.5 0.56 10.5 0.0 4.8 3 2 1 4 4 4 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO90819.1 - 1e-06 29.3 10.4 0.011 16.3 0.2 4.7 2 2 3 5 5 5 3 Tetratricopeptide repeat TPR_20 PF14561.6 RKO90819.1 - 2.1e-06 28.0 5.7 0.064 13.6 0.1 5.0 2 1 3 5 5 5 2 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO90819.1 - 0.0009 19.4 3.7 2.1 8.6 0.0 4.5 3 2 1 4 4 4 1 Anaphase-promoting complex, cyclosome, subunit 3 BTAD PF03704.17 RKO90819.1 - 0.0036 17.8 9.0 0.96 9.9 0.2 4.6 3 1 0 3 3 3 1 Bacterial transcriptional activator domain TPR_6 PF13174.6 RKO90819.1 - 0.0091 16.6 14.8 18 6.2 0.0 6.9 8 1 0 8 8 7 0 Tetratricopeptide repeat YfiO PF13525.6 RKO90819.1 - 0.03 14.1 1.4 0.21 11.3 0.0 2.8 2 1 0 3 3 3 0 Outer membrane lipoprotein SHNi-TPR PF10516.9 RKO90819.1 - 0.051 13.0 0.9 1.5 8.4 0.2 3.0 2 0 0 2 2 2 0 SHNi-TPR T6SS_VasJ PF16989.5 RKO90819.1 - 0.074 12.5 2.1 0.15 11.5 0.1 2.2 2 0 0 2 2 2 0 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ TPR_7 PF13176.6 RKO90819.1 - 0.16 12.0 8.4 13 6.0 0.0 5.4 6 0 0 6 6 6 0 Tetratricopeptide repeat CAMP_factor PF07373.11 RKO90819.1 - 0.38 10.3 5.4 0.47 10.0 0.2 2.5 2 1 1 3 3 3 0 CAMP factor (Cfa) Cytochrom_B562 PF07361.11 RKO90819.1 - 0.45 11.2 6.9 4.7 7.9 0.2 3.9 4 0 0 4 4 4 0 Cytochrome b562 TPR_21 PF09976.9 RKO90819.1 - 0.86 9.3 8.3 0.35 10.6 1.0 3.0 2 1 1 3 3 3 0 Tetratricopeptide repeat-like domain MAS20 PF02064.15 RKO90819.1 - 0.86 9.7 4.4 11 6.1 0.0 3.6 3 1 1 4 4 4 0 MAS20 protein import receptor DUF4363 PF14276.6 RKO90819.1 - 0.95 9.6 11.2 37 4.5 0.4 4.8 4 1 0 4 4 4 0 Domain of unknown function (DUF4363) ArnB_C PF18677.1 RKO90819.1 - 1 9.5 4.7 3.1 8.0 0.3 3.1 3 1 0 3 3 2 0 Archaellum regulatory network B, C-terminal domain Zn_clus PF00172.18 RKO90821.1 - 4.8e-06 26.6 14.4 7.6e-06 26.0 14.4 1.3 1 0 0 1 1 1 1 Fungal Zn(2)-Cys(6) binuclear cluster domain SAGA-Tad1 PF12767.7 RKO90822.1 - 2.9e-26 92.6 0.0 9.1e-26 91.0 0.0 1.8 1 1 0 1 1 1 1 Transcriptional regulator of RNA polII, SAGA, subunit Myc_N PF01056.18 RKO90823.1 - 0.0047 16.9 0.6 0.006 16.5 0.6 1.1 1 0 0 1 1 1 1 Myc amino-terminal region Gb3_synth PF04572.12 RKO90824.1 - 7.5e-22 77.9 0.0 8.6e-21 74.5 0.0 2.1 1 1 0 1 1 1 1 Alpha 1,4-glycosyltransferase conserved region Gly_transf_sug PF04488.15 RKO90824.1 - 3.3e-12 46.9 0.0 5.4e-12 46.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase sugar-binding region containing DXD motif TcdA_TcdB PF12919.7 RKO90824.1 - 0.25 10.6 0.0 0.66 9.2 0.0 1.5 2 0 0 2 2 2 0 TcdA/TcdB catalytic glycosyltransferase domain TPR_1 PF00515.28 RKO90825.1 - 7.4e-26 88.9 33.1 1.1e-06 28.2 0.0 13.7 14 1 0 14 14 14 7 Tetratricopeptide repeat TPR_2 PF07719.17 RKO90825.1 - 3.2e-25 86.2 53.6 0.0026 17.7 0.1 17.4 18 0 0 18 18 18 8 Tetratricopeptide repeat TPR_11 PF13414.6 RKO90825.1 - 1.6e-22 78.9 21.4 0.00025 20.7 0.1 12.7 10 3 4 14 14 14 4 TPR repeat TPR_17 PF13431.6 RKO90825.1 - 4.1e-21 73.8 17.6 0.0043 17.3 0.1 12.6 14 0 0 14 14 11 3 Tetratricopeptide repeat TPR_19 PF14559.6 RKO90825.1 - 3.2e-17 62.8 76.5 0.00023 21.6 1.6 13.5 11 2 3 14 14 13 8 Tetratricopeptide repeat TPR_12 PF13424.6 RKO90825.1 - 1.6e-14 53.9 59.1 0.00018 21.7 0.2 13.4 12 3 3 16 16 14 6 Tetratricopeptide repeat TPR_8 PF13181.6 RKO90825.1 - 2.7e-14 52.1 22.0 0.0026 17.9 0.1 13.2 15 1 0 15 15 14 3 Tetratricopeptide repeat TPR_16 PF13432.6 RKO90825.1 - 1e-12 48.5 136.2 0.00018 22.1 6.9 16.4 9 4 9 19 19 18 12 Tetratricopeptide repeat TPR_7 PF13176.6 RKO90825.1 - 2e-09 36.8 28.5 0.061 13.4 0.2 10.2 10 1 1 11 11 10 4 Tetratricopeptide repeat TPR_14 PF13428.6 RKO90825.1 - 2e-09 37.5 118.2 0.00072 20.2 0.7 20.4 13 3 8 22 22 21 7 Tetratricopeptide repeat TPR_9 PF13371.6 RKO90825.1 - 6.7e-08 32.6 22.3 6.7e-05 23.0 2.1 10.4 10 3 3 13 13 13 5 Tetratricopeptide repeat TPR_10 PF13374.6 RKO90825.1 - 0.00037 20.2 30.5 4.3 7.3 0.0 10.1 10 0 0 10 10 10 3 Tetratricopeptide repeat TPR_15 PF13429.6 RKO90825.1 - 0.00038 19.8 23.4 0.0013 18.1 2.3 6.5 5 3 2 7 7 7 3 Tetratricopeptide repeat Citrate_synt PF00285.21 RKO90825.1 - 0.00076 18.7 1.0 0.002 17.3 1.0 1.7 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain APP_E2 PF12925.7 RKO90825.1 - 0.0016 18.2 0.6 0.52 10.0 0.1 2.9 3 0 0 3 3 3 1 E2 domain of amyloid precursor protein ANAPC3 PF12895.7 RKO90825.1 - 0.013 15.7 19.7 0.3 11.3 0.0 6.1 5 2 2 7 7 6 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 RKO90825.1 - 4 8.3 41.0 4.3 8.2 0.1 12.5 14 0 0 14 14 13 0 Tetratricopeptide repeat Coatomer_E PF04733.14 RKO90825.1 - 8.5 5.7 8.6 4.2 6.7 0.1 4.2 5 1 0 6 6 6 0 Coatomer epsilon subunit Cut8 PF08559.10 RKO90828.1 - 2.1e-20 73.4 0.0 2.3e-20 73.2 0.0 1.0 1 0 0 1 1 1 1 Cut8, nuclear proteasome tether protein HMG_box PF00505.19 RKO90829.1 - 7e-21 74.4 0.2 7.8e-21 74.3 0.2 1.0 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 RKO90829.1 - 1.2e-14 54.6 0.2 1.3e-14 54.5 0.2 1.0 1 0 0 1 1 1 1 HMG-box domain CHDNT PF08073.12 RKO90829.1 - 0.075 13.0 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 CHDNT (NUC034) domain BUD22 PF09073.10 RKO90830.1 - 0.00032 20.2 10.9 0.00046 19.7 10.9 1.1 1 0 0 1 1 1 1 BUD22 FHA PF00498.26 RKO90830.1 - 0.0066 16.8 0.0 0.012 16.0 0.0 1.4 1 0 0 1 1 1 1 FHA domain TFIIA PF03153.13 RKO90830.1 - 0.012 15.6 8.1 0.015 15.3 8.1 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit RNA_pol_3_Rpc31 PF11705.8 RKO90830.1 - 0.021 15.1 17.2 0.031 14.6 17.2 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 Nop14 PF04147.12 RKO90830.1 - 0.022 13.0 14.0 0.029 12.6 14.0 1.1 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 RKO90830.1 - 0.027 13.9 13.3 0.041 13.3 13.3 1.2 1 0 0 1 1 1 0 SDA1 NPR3 PF03666.13 RKO90830.1 - 0.04 12.7 1.3 0.055 12.3 1.3 1.1 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 PPP4R2 PF09184.11 RKO90830.1 - 0.041 13.5 11.0 0.057 13.0 11.0 1.2 1 0 0 1 1 1 0 PPP4R2 Cwf_Cwc_15 PF04889.12 RKO90830.1 - 0.1 12.3 13.6 0.15 11.8 13.6 1.2 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein PTPRCAP PF15713.5 RKO90830.1 - 0.23 11.7 10.9 0.56 10.5 10.9 1.6 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated CDC45 PF02724.14 RKO90830.1 - 0.41 8.9 11.9 0.55 8.5 11.9 1.1 1 0 0 1 1 1 0 CDC45-like protein Tim54 PF11711.8 RKO90830.1 - 0.71 8.6 5.3 1 8.1 5.3 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Sporozoite_P67 PF05642.11 RKO90830.1 - 0.82 7.7 4.2 1.5 6.8 4.2 1.4 1 0 0 1 1 1 0 Sporozoite P67 surface antigen RNA_pol_Rpc4 PF05132.14 RKO90830.1 - 1.7 9.1 3.8 2.8 8.4 3.8 1.3 1 0 0 1 1 1 0 RNA polymerase III RPC4 TFB6 PF17110.5 RKO90830.1 - 2 8.1 5.7 3.6 7.3 5.7 1.4 1 0 0 1 1 1 0 Subunit 11 of the general transcription factor TFIIH DUF5641 PF18701.1 RKO90832.1 - 0.17 12.1 0.0 0.26 11.5 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5641) F-box-like PF12937.7 RKO90837.1 - 4.7e-05 23.2 0.2 0.00011 22.0 0.2 1.6 1 0 0 1 1 1 1 F-box-like MatE PF01554.18 RKO90838.1 - 1.8e-26 92.7 16.2 2.2e-10 40.4 4.4 4.6 4 0 0 4 4 4 4 MatE DUF2011 PF09428.10 RKO90840.1 - 7e-05 23.0 0.7 0.00025 21.2 0.7 1.9 1 1 0 1 1 1 1 Fungal protein of unknown function (DUF2011) DUF4937 PF16291.5 RKO90843.1 - 0.03 14.6 0.0 0.067 13.5 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4937 LRR_6 PF13516.6 RKO90844.1 - 0.085 13.0 0.4 30 5.0 0.3 3.2 2 0 0 2 2 2 0 Leucine Rich repeat DUF1699 PF08004.11 RKO90844.1 - 0.23 11.1 0.0 7.8 6.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1699) LRR_4 PF12799.7 RKO90844.1 - 1.8 9.1 6.6 30 5.2 0.1 4.1 3 1 3 6 6 6 0 Leucine Rich repeats (2 copies) CLASP_N PF12348.8 RKO90847.1 - 0.0012 18.4 0.7 0.0014 18.2 0.7 1.0 1 0 0 1 1 1 1 CLASP N terminal HAUS4 PF14735.6 RKO90847.1 - 0.047 13.4 3.4 0.055 13.2 3.4 1.0 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 4 UFD1 PF03152.14 RKO90847.1 - 0.14 11.6 0.1 0.18 11.2 0.1 1.2 1 0 0 1 1 1 0 Ubiquitin fusion degradation protein UFD1 hnRNP_Q_AcD PF18360.1 RKO90849.1 - 0.055 13.4 0.0 0.09 12.8 0.0 1.3 1 0 0 1 1 1 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain tRNA_anti-codon PF01336.25 RKO90850.1 - 9.4e-06 25.5 0.0 1.1e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain F-box-like PF12937.7 RKO90853.1 - 3.1e-07 30.2 0.8 3.1e-07 30.2 0.8 2.9 3 0 0 3 3 3 1 F-box-like AP_endonuc_2 PF01261.24 RKO90853.1 - 0.0087 15.5 0.0 0.017 14.6 0.0 1.4 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel F-box_5 PF18511.1 RKO90853.1 - 0.012 15.2 0.3 0.061 12.9 0.0 2.1 2 0 0 2 2 2 0 F-box LRR_6 PF13516.6 RKO90853.1 - 0.17 12.0 7.1 0.91 9.7 0.1 4.2 4 0 0 4 4 4 0 Leucine Rich repeat LRR_1 PF00560.33 RKO90853.1 - 0.24 12.1 2.5 67 4.6 0.0 4.1 3 0 0 3 3 3 0 Leucine Rich Repeat Pro_CA PF00484.19 RKO90854.1 - 3e-48 164.1 0.1 3.5e-48 163.8 0.1 1.0 1 0 0 1 1 1 1 Carbonic anhydrase Kelch_5 PF13854.6 RKO90855.1 - 3.8e-10 39.5 0.5 0.014 15.3 0.0 5.4 6 0 0 6 6 6 2 Kelch motif Kelch_1 PF01344.25 RKO90855.1 - 7.1e-08 31.9 0.1 0.24 11.0 0.0 5.0 5 0 0 5 5 5 2 Kelch motif Kelch_6 PF13964.6 RKO90855.1 - 4.4e-05 23.6 8.0 0.19 12.1 0.0 6.8 5 2 1 6 6 6 1 Kelch motif DUF4690 PF15756.5 RKO90855.1 - 0.026 15.1 0.3 0.14 12.8 0.3 2.3 1 0 0 1 1 1 0 Small Novel Rich in Cartilage DUF3498 PF12004.8 RKO90855.1 - 0.07 12.3 2.9 0.11 11.6 2.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3498) Kelch_3 PF13415.6 RKO90855.1 - 0.077 13.3 15.2 0.7 10.3 0.0 5.8 6 1 0 6 6 6 0 Galactose oxidase, central domain Kelch_4 PF13418.6 RKO90855.1 - 0.19 11.8 0.0 0.19 11.8 0.0 5.6 7 0 0 7 7 7 0 Galactose oxidase, central domain Sec20 PF03908.13 RKO90856.1 - 1.1e-21 76.6 2.2 1.1e-21 76.6 2.2 1.7 2 0 0 2 2 2 1 Sec20 DNA_photolyase PF00875.18 RKO90856.1 - 0.017 15.2 0.9 0.029 14.4 0.3 1.7 1 1 1 2 2 2 0 DNA photolyase Amnionless PF14828.6 RKO90856.1 - 0.033 13.0 0.3 0.057 12.3 0.1 1.3 1 1 0 1 1 1 0 Amnionless Urease_gamma PF00547.18 RKO90856.1 - 0.043 14.1 0.9 0.11 12.8 0.9 1.7 1 0 0 1 1 1 0 Urease, gamma subunit Syntaxin-6_N PF09177.11 RKO90856.1 - 1 9.9 10.3 1.8e+03 -0.5 9.6 3.3 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF883 PF05957.13 RKO90856.1 - 5.2 7.7 15.5 0.78 10.4 5.7 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) AT_hook PF02178.19 RKO90857.1 - 0.0079 16.0 4.7 0.0079 16.0 4.7 2.4 2 0 0 2 2 2 1 AT hook motif FAM104 PF15434.6 RKO90857.1 - 0.34 11.5 5.8 0.11 13.1 2.7 1.8 2 0 0 2 2 2 0 Family 104 Macoilin PF09726.9 RKO90857.1 - 1.2 7.6 7.1 1.4 7.4 7.1 1.0 1 0 0 1 1 1 0 Macoilin family CDC45 PF02724.14 RKO90857.1 - 1.7 6.9 14.6 2.1 6.6 14.6 1.1 1 0 0 1 1 1 0 CDC45-like protein Zip PF02535.22 RKO90857.1 - 5 6.3 4.2 5.3 6.1 4.2 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter CDC27 PF09507.10 RKO90857.1 - 6.3 6.1 25.3 7.5 5.8 25.3 1.1 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Glyco_hydro_28 PF00295.17 RKO90858.1 - 0.0011 18.1 0.0 0.0018 17.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 Glyco_hydro_28 PF00295.17 RKO90859.1 - 3.8e-05 22.9 0.1 4.3e-05 22.7 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 Glyco_hydro_28 PF00295.17 RKO90860.1 - 1.2e-10 41.0 0.1 1.5e-10 40.7 0.1 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 Pectate_lyase_3 PF12708.7 RKO90860.1 - 8e-06 25.8 0.2 1.8e-05 24.7 0.2 1.6 1 1 0 1 1 1 1 Pectate lyase superfamily protein MutS_V PF00488.21 RKO90861.1 - 1.1e-43 149.4 0.0 2.2e-43 148.5 0.0 1.4 1 1 0 1 1 1 1 MutS domain V DUF4828 PF16110.5 RKO90861.1 - 0.17 12.4 0.0 0.33 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4828) SPX PF03105.19 RKO90864.1 - 0.3 11.0 11.9 18 5.1 0.0 2.3 2 0 0 2 2 2 0 SPX domain PARG_cat PF05028.14 RKO90865.1 - 2.3e-103 346.1 0.0 1.1e-60 205.7 0.0 2.1 2 0 0 2 2 2 2 Poly (ADP-ribose) glycohydrolase (PARG) Arc_C PF18162.1 RKO90867.1 - 0.16 11.8 0.1 0.65 9.9 0.0 2.0 2 0 0 2 2 2 0 Arc C-lobe PhaG_MnhG_YufB PF03334.14 RKO90867.1 - 0.19 12.0 0.0 0.36 11.1 0.0 1.4 1 0 0 1 1 1 0 Na+/H+ antiporter subunit HSP70 PF00012.20 RKO90870.1 - 1.5e-249 829.2 9.9 1.8e-249 829.0 9.9 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 RKO90870.1 - 1.1e-17 63.9 0.6 1.8e-17 63.2 0.6 1.2 1 0 0 1 1 1 1 MreB/Mbl protein Hydantoinase_A PF01968.18 RKO90870.1 - 0.065 12.5 0.8 0.2 10.9 0.1 2.1 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase Spore_GerAC PF05504.11 RKO90870.1 - 0.13 12.5 0.1 0.13 12.5 0.1 3.5 3 1 0 3 3 3 0 Spore germination B3/ GerAC like, C-terminal SCAMP PF04144.13 RKO90871.1 - 1.6e-27 96.9 3.8 2e-27 96.6 3.8 1.1 1 0 0 1 1 1 1 SCAMP family Tweety PF04906.13 RKO90871.1 - 0.076 11.7 0.3 0.094 11.4 0.3 1.1 1 0 0 1 1 1 0 Tweety DUF4653 PF15546.6 RKO90871.1 - 0.33 10.5 1.9 0.44 10.1 1.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4653) F-box-like PF12937.7 RKO90872.1 - 0.00081 19.2 0.7 0.0021 17.9 0.7 1.7 1 0 0 1 1 1 1 F-box-like Methyltransf_24 PF13578.6 RKO90872.1 - 0.13 13.3 0.0 0.3 12.1 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Cyclin_N PF00134.23 RKO90873.1 - 0.13 12.0 0.0 0.19 11.5 0.0 1.2 1 0 0 1 1 1 0 Cyclin, N-terminal domain Cyclin PF08613.11 RKO90874.1 - 0.0042 17.5 0.0 0.0045 17.4 0.0 1.1 1 0 0 1 1 1 1 Cyclin Mito_carr PF00153.27 RKO90876.1 - 7.2e-12 45.1 3.1 1.9e-05 24.5 0.4 2.3 2 0 0 2 2 2 2 Mitochondrial carrier protein Herpes_gI PF01688.17 RKO90877.1 - 0.11 12.4 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein I Rap_GAP PF02145.15 RKO90878.1 - 2e-34 118.8 0.0 2.7e-34 118.3 0.0 1.2 1 0 0 1 1 1 1 Rap/ran-GAP Tuberin PF03542.16 RKO90878.1 - 9.8e-30 103.8 2.0 2.5e-25 89.4 1.1 2.1 2 0 0 2 2 2 2 Tuberin DUF1981 PF09324.10 RKO90879.1 - 1.4e-27 95.4 0.6 2.2e-25 88.3 0.5 3.1 3 0 0 3 3 3 1 Domain of unknown function (DUF1981) Mon2_C PF16206.5 RKO90879.1 - 0.00063 18.0 0.0 0.00096 17.4 0.0 1.2 1 0 0 1 1 1 1 C-terminal region of Mon2 protein DUF1539 PF07560.11 RKO90879.1 - 0.17 12.0 0.0 0.55 10.3 0.0 1.8 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1539) Pkinase PF00069.25 RKO90880.1 - 5.3e-13 48.9 0.0 6.5e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain ABC1 PF03109.16 RKO90880.1 - 0.00039 20.6 0.1 0.00068 19.8 0.1 1.3 1 0 0 1 1 1 1 ABC1 family Pkinase_fungal PF17667.1 RKO90880.1 - 0.0022 16.9 0.0 0.0031 16.4 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Borealin PF10512.9 RKO90881.1 - 0.027 14.4 1.6 0.037 14.0 0.2 1.9 2 0 0 2 2 2 0 Cell division cycle-associated protein 8 Nbl1_Borealin_N PF10444.9 RKO90881.1 - 0.12 12.0 0.1 0.25 11.0 0.1 1.5 1 0 0 1 1 1 0 Nbl1 / Borealin N terminal INTS5_C PF14838.6 RKO90882.1 - 0.003 16.3 0.0 0.0042 15.8 0.0 1.2 1 0 0 1 1 1 1 Integrator complex subunit 5 C-terminus Sec23_trunk PF04811.15 RKO90883.1 - 2.7e-76 256.3 0.1 5.5e-76 255.3 0.1 1.5 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain Sec23_helical PF04815.15 RKO90883.1 - 2.4e-24 85.1 0.6 9e-24 83.3 0.2 2.3 3 0 0 3 3 3 1 Sec23/Sec24 helical domain Sec23_BS PF08033.12 RKO90883.1 - 4.3e-19 69.1 0.1 2.1e-18 66.9 0.0 2.1 2 0 0 2 2 2 1 Sec23/Sec24 beta-sandwich domain zf-Sec23_Sec24 PF04810.15 RKO90883.1 - 1e-14 54.3 5.4 1.9e-14 53.4 5.4 1.5 1 0 0 1 1 1 1 Sec23/Sec24 zinc finger Gelsolin PF00626.22 RKO90883.1 - 3.6e-06 26.8 0.0 8.2e-06 25.6 0.0 1.5 1 0 0 1 1 1 1 Gelsolin repeat Vps36-NZF-N PF16988.5 RKO90883.1 - 0.0068 15.8 0.2 0.014 14.8 0.2 1.5 1 0 0 1 1 1 1 Vacuolar protein sorting 36 NZF-N zinc-finger domain VWA_2 PF13519.6 RKO90883.1 - 0.16 12.6 0.0 7.3 7.3 0.0 2.8 2 0 0 2 2 2 0 von Willebrand factor type A domain Pyr_redox_2 PF07992.14 RKO90885.1 - 4.4e-49 167.3 0.1 5.6e-49 166.9 0.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 RKO90885.1 - 2.8e-16 59.9 0.1 1.2e-14 54.7 0.0 2.8 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 RKO90885.1 - 7.4e-14 51.7 0.0 3.4e-12 46.2 0.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 RKO90885.1 - 0.00053 19.5 0.7 0.01 15.2 0.2 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 RKO90885.1 - 0.0069 15.6 0.9 0.022 14.0 0.1 2.1 2 1 0 3 3 3 1 Thi4 family K_oxygenase PF13434.6 RKO90885.1 - 0.0078 15.4 0.0 0.026 13.7 0.0 1.9 2 1 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_8 PF13450.6 RKO90885.1 - 0.0091 16.2 0.5 0.14 12.4 0.1 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 RKO90885.1 - 0.055 13.9 0.1 0.41 11.1 0.0 2.3 2 0 0 2 2 2 0 Putative NAD(P)-binding DUF2833 PF11090.8 RKO90885.1 - 0.18 12.2 0.0 0.36 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2833) GIDA PF01134.22 RKO90885.1 - 0.33 10.0 1.2 1.3 8.1 0.3 2.4 4 0 0 4 4 4 0 Glucose inhibited division protein A MCM PF00493.23 RKO90888.1 - 8.6e-101 335.7 0.0 1.4e-100 335.0 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 RKO90888.1 - 1.5e-36 125.0 0.1 3e-36 124.1 0.1 1.4 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 RKO90888.1 - 1.6e-28 98.9 0.2 3.9e-28 97.7 0.2 1.7 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_N PF14551.6 RKO90888.1 - 2.2e-10 41.0 0.1 1.3e-09 38.6 0.1 2.2 2 0 0 2 2 2 1 MCM N-terminal domain AAA_5 PF07728.14 RKO90888.1 - 4.6e-08 33.2 0.0 1.2e-07 31.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 RKO90888.1 - 3.4e-06 26.6 0.1 0.0022 17.4 0.0 2.3 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 RKO90888.1 - 0.00033 20.5 0.0 0.0013 18.6 0.0 2.0 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 RKO90888.1 - 0.016 15.6 0.0 0.058 13.8 0.0 1.9 1 0 0 1 1 1 0 AAA ATPase domain AAA_lid_5 PF17865.1 RKO90888.1 - 0.021 14.9 0.0 0.075 13.1 0.0 1.9 1 0 0 1 1 1 0 Midasin AAA lid domain Sigma54_activat PF00158.26 RKO90888.1 - 0.029 14.1 0.0 4.6 6.9 0.0 2.5 2 0 0 2 2 2 0 Sigma-54 interaction domain NTPase_1 PF03266.15 RKO90888.1 - 0.061 13.2 0.1 12 5.8 0.0 2.9 2 1 1 3 3 3 0 NTPase Thg1C PF14413.6 RKO90889.1 - 5.6e-18 65.3 0.0 1.6e-17 63.8 0.0 1.6 1 1 0 1 1 1 1 Thg1 C terminal domain AT_hook PF02178.19 RKO90891.1 - 0.033 14.0 14.0 0.16 11.9 5.3 3.8 2 0 0 2 2 2 0 AT hook motif BIRC6 PF12356.8 RKO90891.1 - 0.74 9.2 3.2 21 4.5 1.5 2.4 2 1 0 2 2 2 0 Baculoviral IAP repeat-containing protein 6 GAGA_bind PF06217.12 RKO90891.1 - 3.6 7.8 20.6 2 8.7 9.0 2.3 2 0 0 2 2 2 0 GAGA binding protein-like family DUF2052 PF09747.9 RKO90891.1 - 6.8 6.8 37.5 4.2 7.5 24.0 2.3 2 0 0 2 2 2 0 Coiled-coil domain containing protein (DUF2052) TPR_MLP1_2 PF07926.12 RKO90893.1 - 3.4e-21 75.6 18.7 3.4e-21 75.6 18.7 10.6 3 2 7 10 10 10 4 TPR/MLP1/MLP2-like protein ZapB PF06005.12 RKO90893.1 - 0.0021 18.5 6.5 0.0021 18.5 6.5 14.3 7 5 3 10 10 10 1 Cell division protein ZapB DivIC PF04977.15 RKO90893.1 - 0.0025 17.6 3.5 0.0025 17.6 3.5 15.6 9 5 6 18 18 18 2 Septum formation initiator ATG16 PF08614.11 RKO90893.1 - 0.0058 16.9 16.9 0.0058 16.9 16.9 10.0 1 1 5 8 8 8 2 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.8 RKO90893.1 - 0.01 15.8 0.9 0.01 15.8 0.9 13.9 10 5 2 13 13 13 0 TATA element modulatory factor 1 DNA binding DUF2680 PF10925.8 RKO90893.1 - 1.7 8.7 16.7 0.27 11.3 3.9 4.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2680) UPF0242 PF06785.11 RKO90894.1 - 0.00063 19.9 39.7 0.0075 16.4 18.1 3.2 1 1 1 3 3 3 2 Uncharacterised protein family (UPF0242) N-terminus YabA PF06156.13 RKO90894.1 - 0.013 16.1 1.3 0.013 16.1 1.3 4.3 1 1 3 4 4 4 0 Initiation control protein YabA Fez1 PF06818.15 RKO90894.1 - 0.033 14.6 43.0 0.099 13.1 4.7 3.0 1 1 2 3 3 3 0 Fez1 Rootletin PF15035.6 RKO90894.1 - 0.43 10.6 45.6 0.083 12.9 16.0 2.2 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion DUF4201 PF13870.6 RKO90894.1 - 0.5 10.1 38.8 0.87 9.3 3.4 3.6 1 1 2 3 3 3 0 Domain of unknown function (DUF4201) HOOK PF05622.12 RKO90894.1 - 0.66 8.1 44.4 0.012 13.9 4.7 2.9 1 1 0 2 2 2 0 HOOK protein DUF1664 PF07889.12 RKO90894.1 - 0.76 9.8 20.1 0.62 10.1 2.6 3.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) FNIP_N PF14636.6 RKO90894.1 - 0.91 10.5 6.7 1.8 9.5 6.5 1.7 1 1 0 1 1 1 0 Folliculin-interacting protein N-terminus Laminin_II PF06009.12 RKO90894.1 - 1.6 8.8 27.2 0.79 9.7 3.7 3.5 1 1 2 3 3 3 0 Laminin Domain II SlyX PF04102.12 RKO90894.1 - 2.1 9.0 32.9 0.26 12.0 4.1 5.2 2 2 3 5 5 5 0 SlyX DUF4472 PF14739.6 RKO90894.1 - 2.4 9.0 41.5 1.7 9.4 5.1 3.4 1 1 1 3 3 3 0 Domain of unknown function (DUF4472) CENP-F_leu_zip PF10473.9 RKO90894.1 - 3.3 7.7 46.2 28 4.7 14.4 3.5 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spc7 PF08317.11 RKO90894.1 - 5.1 5.9 45.3 1 8.2 20.4 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein BRE1 PF08647.11 RKO90894.1 - 5.9 7.0 44.9 2.1 8.4 5.4 4.1 1 1 2 4 4 4 0 BRE1 E3 ubiquitin ligase DUF2400 PF09674.10 RKO90894.1 - 6.8 6.6 8.3 4.5 7.2 5.3 2.1 1 1 2 3 3 3 0 Protein of unknown function (DUF2400) GCFC PF07842.12 RKO90895.1 - 5.8e-06 26.1 0.0 7.5e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 GC-rich sequence DNA-binding factor-like protein RRM_1 PF00076.22 RKO90896.1 - 9.7e-26 89.4 0.0 9e-07 28.6 0.0 5.8 6 0 0 6 6 6 5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 RKO90896.1 - 0.001 18.9 0.0 0.28 11.1 0.0 3.6 4 0 0 4 4 4 1 Occluded RNA-recognition motif Nup35_RRM_2 PF14605.6 RKO90896.1 - 0.024 14.6 0.0 1.9 8.5 0.0 2.6 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 RKO90896.1 - 0.15 12.2 0.0 0.96 9.6 0.0 2.1 2 0 0 2 2 2 0 RNA recognition motif Ribosomal_S10 PF00338.22 RKO90898.1 - 1.1e-29 102.5 0.4 1.3e-29 102.3 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e DEAD PF00270.29 RKO90899.1 - 7.3e-26 91.0 0.2 4.8e-25 88.3 0.3 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase Sec63 PF02889.16 RKO90899.1 - 4.7e-19 68.6 0.1 7e-19 68.0 0.1 1.3 1 0 0 1 1 1 1 Sec63 Brl domain ResIII PF04851.15 RKO90899.1 - 1.4e-14 54.4 0.0 2.7e-14 53.6 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 RKO90899.1 - 1.1e-06 28.9 0.0 9.9e-06 25.9 0.0 2.4 1 1 0 1 1 1 1 Helicase conserved C-terminal domain AAA_22 PF13401.6 RKO90899.1 - 0.00076 19.8 0.2 0.0035 17.6 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 RKO90899.1 - 0.0022 18.3 0.6 0.0051 17.1 0.6 1.6 1 0 0 1 1 1 1 AAA domain Asp PF00026.23 RKO90900.1 - 4.6e-18 65.7 6.1 5.6e-18 65.4 6.1 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO90900.1 - 6.6e-05 23.2 3.0 0.013 15.7 0.1 2.5 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal Ipi1_N PF12333.8 RKO90901.1 - 8.3e-12 45.6 0.0 3e-11 43.8 0.0 2.0 1 0 0 1 1 1 1 Rix1 complex component involved in 60S ribosome maturation RraA-like PF03737.15 RKO90902.1 - 9.3e-29 100.5 1.3 1.3e-28 100.1 1.3 1.2 1 0 0 1 1 1 1 Aldolase/RraA DUF687 PF05095.12 RKO90903.1 - 0.044 12.3 0.0 0.061 11.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF687) Phage_NinH PF06322.11 RKO90904.1 - 0.06 13.2 0.1 0.12 12.3 0.1 1.4 1 0 0 1 1 1 0 Phage NinH protein bMG3 PF11974.8 RKO90904.1 - 0.09 12.8 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial alpha-2-macroglobulin MG3 domain zf-RanBP PF00641.18 RKO90905.1 - 1.9e-42 142.2 64.7 4e-08 32.4 1.5 7.3 7 0 0 7 7 7 7 Zn-finger in Ran binding protein and others RNase_T PF00929.24 RKO90905.1 - 1.5e-15 58.1 0.0 2.3e-15 57.5 0.0 1.3 1 0 0 1 1 1 1 Exonuclease RRM_1 PF00076.22 RKO90905.1 - 5.9e-08 32.4 0.0 1.3e-07 31.4 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Rubredoxin PF00301.20 RKO90905.1 - 0.12 12.4 0.0 0.12 12.4 0.0 8.2 8 1 0 8 8 8 0 Rubredoxin AAA_23 PF13476.6 RKO90906.1 - 1.3e-17 65.0 0.0 1.9e-17 64.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 RKO90906.1 - 2e-12 47.0 0.0 2.6e-12 46.6 0.0 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 RKO90906.1 - 2.1e-07 31.0 0.1 2.3e-07 30.9 0.1 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 RKO90906.1 - 2.7e-05 23.8 0.0 5.3e-05 22.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 RKO90906.1 - 5.7e-05 22.9 0.0 0.16 11.6 0.0 2.1 2 0 0 2 2 2 2 AAA domain AAA_21 PF13304.6 RKO90906.1 - 7.6e-05 22.7 0.1 9.2e-05 22.4 0.1 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 RKO90906.1 - 0.0016 18.9 0.5 0.0051 17.3 0.5 1.9 1 1 0 1 1 1 1 ABC transporter AAA_27 PF13514.6 RKO90906.1 - 0.0039 16.8 0.0 0.0057 16.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 RKO90906.1 - 0.01 15.4 0.0 0.019 14.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 RKO90906.1 - 0.011 16.1 0.1 0.021 15.2 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 RKO90906.1 - 0.015 15.2 0.1 0.032 14.1 0.1 1.6 1 1 0 1 1 1 0 RsgA GTPase Roc PF08477.13 RKO90906.1 - 0.03 14.5 0.1 4.3 7.6 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_28 PF13521.6 RKO90906.1 - 0.034 14.4 0.0 0.055 13.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 RKO90906.1 - 0.035 14.5 0.5 0.071 13.5 0.5 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 RKO90906.1 - 0.054 13.8 0.0 0.079 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 RKO90906.1 - 0.07 12.6 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein RNA_helicase PF00910.22 RKO90906.1 - 0.08 13.3 0.1 0.2 12.1 0.0 1.7 2 0 0 2 2 2 0 RNA helicase NACHT PF05729.12 RKO90906.1 - 0.092 12.7 0.1 0.52 10.2 0.1 1.9 1 1 1 2 2 2 0 NACHT domain AAA_7 PF12775.7 RKO90906.1 - 0.13 11.8 0.1 0.28 10.7 0.0 1.6 2 0 0 2 2 2 0 P-loop containing dynein motor region SRP54 PF00448.22 RKO90906.1 - 0.15 11.7 0.0 0.24 11.0 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain FtsK_SpoIIIE PF01580.18 RKO90906.1 - 0.19 11.0 0.0 0.31 10.3 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family ABC_ATPase PF09818.9 RKO90908.1 - 3.2e-164 547.0 0.0 4.2e-164 546.6 0.0 1.1 1 0 0 1 1 1 1 Predicted ATPase of the ABC class AAA_23 PF13476.6 RKO90908.1 - 0.0007 20.1 0.1 0.0012 19.4 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 RKO90908.1 - 0.0019 17.9 0.1 0.0052 16.5 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 RKO90908.1 - 0.075 12.6 0.1 2.9 7.4 0.0 2.4 2 0 0 2 2 2 0 AAA domain PNP_UDP_1 PF01048.20 RKO90908.1 - 0.12 11.6 0.0 0.23 10.7 0.0 1.4 1 0 0 1 1 1 0 Phosphorylase superfamily Roc PF08477.13 RKO90909.1 - 0.00026 21.2 0.0 0.00046 20.4 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase AAA_18 PF13238.6 RKO90909.1 - 0.076 13.6 0.0 0.14 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 RKO90909.1 - 0.11 12.8 0.0 0.16 12.3 0.0 1.4 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 RKO90909.1 - 0.19 12.2 0.0 0.46 10.9 0.0 1.9 1 1 0 1 1 1 0 RNA helicase CH PF00307.31 RKO90912.1 - 2.7e-15 56.5 0.0 2e-06 28.0 0.0 2.9 2 1 0 2 2 2 2 Calponin homology (CH) domain DUF5556 PF17711.1 RKO90912.1 - 0.043 13.7 0.0 0.059 13.3 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5556) Asp PF00026.23 RKO90913.1 - 1.9e-27 96.5 0.6 2.4e-27 96.2 0.6 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease Asp PF00026.23 RKO90914.1 - 2.2e-43 148.9 6.7 2.7e-43 148.6 6.7 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 RKO90914.1 - 0.0056 16.5 0.0 0.013 15.2 0.0 1.6 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal TAXi_N PF14543.6 RKO90914.1 - 0.61 10.3 5.5 6.4 7.0 4.0 2.6 1 1 0 1 1 1 0 Xylanase inhibitor N-terminal F-box PF00646.33 RKO90915.1 - 1.6e-05 24.6 0.2 7.9e-05 22.4 0.2 2.2 1 0 0 1 1 1 1 F-box domain LRR_4 PF12799.7 RKO90915.1 - 5.2e-05 23.5 0.0 0.23 11.9 0.0 4.0 4 0 0 4 4 4 2 Leucine Rich repeats (2 copies) F-box-like PF12937.7 RKO90915.1 - 9.7e-05 22.2 0.2 0.0003 20.6 0.2 1.9 1 0 0 1 1 1 1 F-box-like LRR_6 PF13516.6 RKO90915.1 - 0.00053 19.8 1.6 0.02 14.9 0.0 3.8 3 0 0 3 3 3 1 Leucine Rich repeat LRR_8 PF13855.6 RKO90915.1 - 0.13 12.1 0.1 3.4 7.5 0.0 3.0 3 0 0 3 3 3 0 Leucine rich repeat Methyltransf_32 PF13679.6 RKO90917.1 - 0.0076 16.3 0.0 0.026 14.5 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain zf-RING_4 PF14570.6 RKO90918.1 - 2.2e-20 72.2 12.3 5.3e-20 71.0 12.3 1.7 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain RRM_1 PF00076.22 RKO90918.1 - 6.1e-06 26.0 0.3 0.11 12.4 0.0 2.4 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Prok-RING_4 PF14447.6 RKO90918.1 - 0.0021 17.9 10.3 0.083 12.8 5.5 2.5 2 0 0 2 2 2 2 Prokaryotic RING finger family 4 zf-UDP PF14569.6 RKO90918.1 - 0.084 13.0 7.7 0.29 11.3 7.6 2.0 1 1 0 1 1 1 0 Zinc-binding RING-finger MutS_V PF00488.21 RKO90919.1 - 0.078 13.0 0.1 0.25 11.3 0.0 1.7 2 0 0 2 2 2 0 MutS domain V FYVE PF01363.21 RKO90920.1 - 3.4e-24 84.8 21.7 2.3e-16 59.7 7.1 2.3 2 0 0 2 2 2 2 FYVE zinc finger Rbsn PF11464.8 RKO90920.1 - 1.1e-11 44.3 5.4 2.6e-11 43.1 5.4 1.7 1 0 0 1 1 1 1 Rabenosyn Rab binding domain zf-AN1 PF01428.16 RKO90920.1 - 0.0093 16.1 3.8 0.0093 16.1 3.8 3.3 3 1 1 4 4 4 1 AN1-like Zinc finger zinc_ribbon_9 PF14369.6 RKO90920.1 - 0.024 14.9 0.1 0.024 14.9 0.1 3.2 3 0 0 3 3 3 0 zinc-ribbon Anillin_N PF16018.5 RKO90920.1 - 0.59 10.8 2.6 1.8 9.3 0.0 2.9 3 0 0 3 3 3 0 Anillin N-terminus PX PF00787.24 RKO90921.1 - 5e-23 81.3 0.2 5.3e-23 81.2 0.2 1.0 1 0 0 1 1 1 1 PX domain EMP24_GP25L PF01105.24 RKO90922.1 - 1.7e-33 116.1 0.0 1.9e-33 115.9 0.0 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD CDV3 PF15359.6 RKO90923.1 - 0.0076 16.7 4.5 0.012 16.1 4.5 1.3 1 0 0 1 1 1 1 Carnitine deficiency-associated protein 3 HMMR_N PF15905.5 RKO90927.1 - 0.00064 19.3 9.5 0.00064 19.3 9.5 10.5 1 1 8 9 9 9 5 Hyaluronan mediated motility receptor N-terminal APG6_N PF17675.1 RKO90927.1 - 0.0025 18.3 15.4 0.0025 18.3 15.4 14.6 2 1 10 12 12 12 4 Apg6 coiled-coil region HEAT_EZ PF13513.6 RKO90928.1 - 0.016 15.7 0.1 2 9.0 0.0 2.7 2 0 0 2 2 2 0 HEAT-like repeat HEAT PF02985.22 RKO90928.1 - 0.018 15.3 0.1 1 9.8 0.0 2.7 2 0 0 2 2 2 0 HEAT repeat SHE3 PF17078.5 RKO90928.1 - 0.02 14.6 0.2 0.034 13.9 0.2 1.3 1 0 0 1 1 1 0 SWI5-dependent HO expression protein 3 HEAT_2 PF13646.6 RKO90928.1 - 0.31 11.5 3.0 0.6 10.5 0.3 2.4 2 1 0 2 2 2 0 HEAT repeats HALZ PF02183.18 RKO90928.1 - 0.34 11.2 2.7 0.78 10.0 0.9 2.4 3 0 0 3 3 3 0 Homeobox associated leucine zipper Ras PF00071.22 RKO90929.1 - 5e-20 71.7 0.0 3.6e-19 68.9 0.0 2.1 1 1 0 1 1 1 1 Ras family Roc PF08477.13 RKO90929.1 - 1.7e-15 57.3 0.0 3.7e-15 56.2 0.0 1.5 1 1 1 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase AAA_16 PF13191.6 RKO90929.1 - 0.0003 21.2 0.1 0.00045 20.6 0.1 1.3 1 1 0 1 1 1 1 AAA ATPase domain Arf PF00025.21 RKO90929.1 - 0.0009 18.7 0.0 0.0059 16.1 0.0 1.9 2 0 0 2 2 2 1 ADP-ribosylation factor family AAA_7 PF12775.7 RKO90929.1 - 0.0022 17.6 0.1 0.0032 17.0 0.1 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region NACHT PF05729.12 RKO90929.1 - 0.003 17.5 0.1 0.0038 17.2 0.1 1.2 1 0 0 1 1 1 1 NACHT domain AAA PF00004.29 RKO90929.1 - 0.0047 17.3 0.0 0.0074 16.7 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Viral_helicase1 PF01443.18 RKO90929.1 - 0.0063 16.3 0.1 0.0084 15.9 0.1 1.2 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase RsgA_GTPase PF03193.16 RKO90929.1 - 0.0069 16.3 0.0 0.25 11.3 0.0 2.1 2 0 0 2 2 2 1 RsgA GTPase DUF815 PF05673.13 RKO90929.1 - 0.0089 15.2 0.1 0.016 14.4 0.0 1.4 2 0 0 2 2 2 1 Protein of unknown function (DUF815) ATPase_2 PF01637.18 RKO90929.1 - 0.019 14.9 0.0 0.026 14.4 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea Mg_chelatase PF01078.21 RKO90929.1 - 0.028 13.8 0.0 0.036 13.5 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 RKO90929.1 - 0.032 14.5 0.0 0.048 13.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain SRPRB PF09439.10 RKO90929.1 - 0.044 13.2 0.0 0.061 12.8 0.0 1.1 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_5 PF07728.14 RKO90929.1 - 0.07 13.1 0.0 0.1 12.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) PduV-EutP PF10662.9 RKO90929.1 - 0.075 12.8 0.0 0.22 11.2 0.0 1.8 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation RNA_helicase PF00910.22 RKO90929.1 - 0.14 12.6 0.0 0.22 11.9 0.0 1.3 1 0 0 1 1 1 0 RNA helicase AAA_28 PF13521.6 RKO90929.1 - 0.14 12.4 0.1 0.23 11.7 0.1 1.3 1 0 0 1 1 1 0 AAA domain MCM PF00493.23 RKO90929.1 - 0.15 11.1 0.0 0.25 10.4 0.0 1.4 1 0 0 1 1 1 0 MCM P-loop domain PRK PF00485.18 RKO90929.1 - 0.18 11.5 0.0 0.21 11.3 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Zeta_toxin PF06414.12 RKO90929.1 - 0.2 10.9 0.1 0.44 9.8 0.0 1.5 2 0 0 2 2 2 0 Zeta toxin hNIFK_binding PF12196.8 RKO90929.1 - 0.25 10.9 0.1 0.41 10.2 0.1 1.3 1 0 0 1 1 1 0 FHA Ki67 binding domain of hNIFK DUF1358 PF07096.11 RKO90930.1 - 0.00059 19.8 0.6 0.0018 18.2 0.5 1.7 1 1 1 2 2 2 1 Protein of unknown function (DUF1358) Phage_holin_3_6 PF07332.11 RKO90930.1 - 0.11 12.6 2.4 2.1 8.4 1.5 2.2 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III SNO PF01174.19 RKO90931.1 - 7.9e-54 182.4 0.0 9.1e-54 182.2 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 RKO90931.1 - 2.1e-10 40.5 0.0 3.4e-10 39.9 0.0 1.4 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.17 RKO90931.1 - 1.4e-05 24.8 0.0 2.1e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S51 DJ-1_PfpI PF01965.24 RKO90931.1 - 2.7e-05 24.0 0.0 4.5e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 RKO90931.1 - 0.00058 19.7 0.0 0.002 17.9 0.0 1.7 1 1 0 1 1 1 1 Glutamine amidotransferase class-I GTP_EFTU PF00009.27 RKO90932.1 - 1.5e-33 116.0 3.0 1.8e-33 115.7 0.0 2.6 2 2 0 2 2 2 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 RKO90932.1 - 2.1e-17 63.1 0.0 6.8e-17 61.5 0.0 1.9 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 RKO90932.1 - 2.6e-09 37.3 2.0 1.6e-08 34.8 0.0 3.3 3 0 0 3 3 3 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 RKO90932.1 - 6e-06 26.3 0.0 6e-06 26.3 0.0 3.1 4 0 0 4 4 4 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 RKO90932.1 - 1.2e-05 25.1 0.1 3.2e-05 23.7 0.1 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 4 ATP_bind_1 PF03029.17 RKO90932.1 - 0.0032 17.3 0.8 0.0059 16.4 0.0 1.9 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein Roc PF08477.13 RKO90932.1 - 0.0042 17.3 0.0 0.01 16.0 0.0 1.7 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase RsgA_GTPase PF03193.16 RKO90932.1 - 2.1 8.2 4.0 13 5.6 0.1 3.6 2 1 1 3 3 3 0 RsgA GTPase HSP90 PF00183.18 RKO90933.1 - 2.1e-232 772.6 29.5 2.7e-232 772.3 29.5 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 RKO90933.1 - 8.6e-15 55.2 0.1 1.6e-14 54.3 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 RKO90933.1 - 1.9e-10 40.7 0.2 6.2e-10 39.0 0.2 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Cofac_haem_bdg PF04187.13 RKO90933.1 - 0.12 12.4 0.1 0.38 10.7 0.1 1.8 1 0 0 1 1 1 0 Haem-binding uptake, Tiki superfamily, ChaN HBS1_N PF08938.10 RKO90933.1 - 4.7 7.6 11.1 0.085 13.2 1.8 2.9 2 1 0 2 2 2 0 HBS1 N-terminus PQQ_2 PF13360.6 RKO90935.1 - 1.6e-22 80.3 5.9 2.7e-17 63.2 1.6 2.1 1 1 1 2 2 2 2 PQQ-like domain PQQ PF01011.21 RKO90935.1 - 1.4e-20 72.1 2.3 0.00045 20.0 0.0 5.6 5 0 0 5 5 5 5 PQQ enzyme repeat PQQ_3 PF13570.6 RKO90935.1 - 2.9e-11 43.5 10.1 0.00083 19.8 0.3 6.5 6 1 0 6 6 6 4 PQQ-like domain RRM_1 PF00076.22 RKO90936.1 - 1.8e-61 203.9 0.2 1.6e-18 66.2 0.0 4.8 5 0 0 5 5 5 4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 RKO90936.1 - 5e-06 26.4 0.0 0.023 14.7 0.0 2.9 3 0 0 3 3 3 2 Nup53/35/40-type RNA recognition motif BSP_II PF05432.11 RKO90936.1 - 0.00095 19.0 12.3 0.0017 18.1 12.3 1.3 1 0 0 1 1 1 1 Bone sialoprotein II (BSP-II) PHM7_cyt PF14703.6 RKO90936.1 - 0.0017 18.6 1.5 4 7.6 0.7 4.5 3 1 0 3 3 3 1 Cytosolic domain of 10TM putative phosphate transporter BUD22 PF09073.10 RKO90936.1 - 0.0017 17.8 11.9 0.0036 16.7 11.9 1.5 1 0 0 1 1 1 1 BUD22 RRM_7 PF16367.5 RKO90936.1 - 0.0037 17.3 0.0 0.72 10.0 0.0 3.4 3 0 0 3 3 3 1 RNA recognition motif SET_assoc PF11767.8 RKO90936.1 - 0.015 15.0 0.0 8.1 6.2 0.0 3.4 3 0 0 3 3 3 0 Histone lysine methyltransferase SET associated RRM_Rrp7 PF17799.1 RKO90936.1 - 0.053 13.3 0.0 31 4.3 0.0 3.4 3 0 0 3 3 3 0 Rrp7 RRM-like N-terminal domain Nop14 PF04147.12 RKO90936.1 - 7.5 4.6 16.8 14 3.7 16.8 1.4 1 0 0 1 1 1 0 Nop14-like family Complex1_LYR PF05347.15 RKO90940.1 - 0.02 15.0 0.3 0.048 13.7 0.0 1.8 2 0 0 2 2 2 0 Complex 1 protein (LYR family) Pro_isomerase PF00160.21 RKO90941.1 - 7.7e-44 149.7 0.0 8.5e-44 149.6 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Kinesin PF00225.23 RKO90944.1 - 3.2e-114 381.3 0.0 6.1e-114 380.4 0.0 1.5 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO90944.1 - 4.7e-23 81.8 0.1 1.6e-22 80.1 0.0 1.9 2 0 0 2 2 2 1 Microtubule binding HEPN_AbiU2 PF18734.1 RKO90944.1 - 0.0058 16.2 6.2 0.41 10.1 2.8 2.5 2 0 0 2 2 2 2 AbiU2 AAA_30 PF13604.6 RKO90944.1 - 0.017 14.8 2.3 0.1 12.3 0.0 2.9 2 1 1 3 3 3 0 AAA domain Acyl-CoA_ox_N PF14749.6 RKO90944.1 - 0.034 14.7 6.0 0.085 13.4 6.0 1.7 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal PIF1 PF05970.14 RKO90944.1 - 0.046 12.9 0.0 0.086 12.0 0.0 1.3 1 0 0 1 1 1 0 PIF1-like helicase AAA_22 PF13401.6 RKO90944.1 - 0.092 13.0 1.6 0.46 10.8 0.0 2.7 3 1 0 3 3 3 0 AAA domain Kinesin_assoc PF16183.5 RKO90944.1 - 0.36 11.0 12.5 0.61 10.2 11.2 2.1 1 1 0 1 1 1 0 Kinesin-associated DUF3037 PF11236.8 RKO90944.1 - 8.3 6.9 7.4 10 6.6 3.3 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3037) tRNA-synt_2c PF01411.19 RKO90945.1 - 5.4e-213 708.5 0.0 6.2e-213 708.3 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (A) RGS PF00615.19 RKO90946.1 - 9.8e-08 32.3 0.3 1.2e-07 32.0 0.3 1.1 1 0 0 1 1 1 1 Regulator of G protein signaling domain RGS-like PF09128.11 RKO90946.1 - 0.00011 21.9 0.3 0.00014 21.7 0.3 1.1 1 0 0 1 1 1 1 Regulator of G protein signalling-like domain YqbF PF14553.6 RKO90946.1 - 0.11 12.3 0.1 0.11 12.3 0.1 1.8 2 0 0 2 2 2 0 YqbF, hypothetical protein domain tRNA_edit PF04073.15 RKO90947.1 - 1e-13 51.4 0.9 1.6e-13 50.8 0.9 1.4 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain Peptidase_M24 PF00557.24 RKO90948.1 - 0.031 14.0 0.1 0.067 12.9 0.1 1.5 1 0 0 1 1 1 0 Metallopeptidase family M24 UPF0052 PF01933.18 RKO90949.1 - 6.6e-20 71.5 0.0 7.9e-20 71.3 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 DEAD PF00270.29 RKO90950.1 - 1.4e-17 64.0 0.0 1.5e-17 63.9 0.0 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase RNB PF00773.19 RKO90951.1 - 1.9e-100 336.4 0.0 2.5e-100 336.0 0.0 1.1 1 0 0 1 1 1 1 RNB domain OB_Dis3 PF17849.1 RKO90951.1 - 2.7e-22 78.6 0.0 5.1e-22 77.7 0.0 1.5 1 0 0 1 1 1 1 Dis3-like cold-shock domain 2 (CSD2) Dis3l2_C_term PF17877.1 RKO90951.1 - 2.1e-05 24.7 0.0 5.9e-05 23.3 0.0 1.7 1 0 0 1 1 1 1 DIS3-like exonuclease 2 C terminal Rrp44_CSD1 PF17216.3 RKO90951.1 - 7.7e-05 22.4 0.0 0.00013 21.7 0.0 1.4 1 0 0 1 1 1 1 Rrp44-like cold shock domain CSD2 PF17876.1 RKO90951.1 - 0.00029 20.9 0.0 0.27 11.5 0.0 2.6 2 0 0 2 2 2 2 Cold shock domain DUF4604 PF15377.6 RKO90951.1 - 0.065 13.7 3.7 0.12 12.8 3.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4604) DUF2956 PF11169.8 RKO90951.1 - 0.82 9.9 3.3 1.6 9.0 3.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2956) SNF2_N PF00176.23 RKO90952.1 - 5.8e-32 110.8 0.0 8e-32 110.3 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain AAA PF00004.29 RKO90954.1 - 4.2e-12 46.6 0.0 6.9e-12 45.9 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rep_fac_C PF08542.11 RKO90954.1 - 6.1e-12 45.8 0.1 1.4e-05 25.4 0.0 3.0 2 1 1 3 3 3 2 Replication factor C C-terminal domain DNA_pol3_delta2 PF13177.6 RKO90954.1 - 2.2e-10 40.6 0.1 4.1e-10 39.7 0.1 1.4 1 1 0 1 1 1 1 DNA polymerase III, delta subunit AAA_14 PF13173.6 RKO90954.1 - 0.00011 22.2 0.0 0.00016 21.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 RKO90954.1 - 0.00044 20.5 0.0 0.61 10.4 0.0 2.4 1 1 1 2 2 2 2 AAA domain MipZ PF09140.11 RKO90954.1 - 0.023 14.0 0.0 0.049 12.9 0.0 1.4 2 0 0 2 2 2 0 ATPase MipZ AAA_24 PF13479.6 RKO90954.1 - 0.024 14.3 0.0 0.055 13.2 0.0 1.6 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 RKO90954.1 - 0.052 13.3 0.0 0.08 12.7 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_assoc_2 PF16193.5 RKO90954.1 - 0.055 13.8 0.0 0.15 12.4 0.0 1.7 2 0 0 2 2 2 0 AAA C-terminal domain DUF5119 PF17145.4 RKO90954.1 - 0.11 12.4 0.0 10 6.0 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5119) DUF851 PF05867.11 RKO90954.1 - 0.16 11.4 0.0 0.24 10.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF851) AAA_25 PF13481.6 RKO90954.1 - 0.17 11.4 0.0 0.9 9.1 0.0 2.2 2 1 1 3 3 3 0 AAA domain Fungal_trans PF04082.18 RKO90955.1 - 3.1e-23 82.1 0.1 4.9e-23 81.5 0.1 1.3 1 0 0 1 1 1 1 Fungal specific transcription factor domain TPR_2 PF07719.17 RKO90956.1 - 5.8e-21 72.9 0.2 0.002 18.1 0.0 6.1 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_1 PF00515.28 RKO90956.1 - 1.1e-20 72.5 3.8 0.00012 21.7 0.0 6.5 6 1 0 6 6 6 4 Tetratricopeptide repeat TPR_17 PF13431.6 RKO90956.1 - 8.5e-20 69.6 0.0 0.0032 17.7 0.0 5.2 5 0 0 5 5 5 5 Tetratricopeptide repeat TPR_11 PF13414.6 RKO90956.1 - 4.9e-18 64.5 5.5 2.4e-06 27.1 0.1 4.5 2 2 3 5 5 5 4 TPR repeat TPR_19 PF14559.6 RKO90956.1 - 3.5e-15 56.2 0.1 0.00023 21.6 0.0 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_16 PF13432.6 RKO90956.1 - 7.7e-14 52.1 0.0 1.2e-05 25.8 0.0 3.7 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_8 PF13181.6 RKO90956.1 - 1e-12 47.2 3.1 0.069 13.4 0.0 6.1 6 1 0 6 6 6 4 Tetratricopeptide repeat TPR_14 PF13428.6 RKO90956.1 - 7.4e-11 41.9 0.0 0.0041 17.8 0.1 5.2 1 1 5 6 6 6 3 Tetratricopeptide repeat TPR_9 PF13371.6 RKO90956.1 - 2.5e-09 37.1 0.0 0.0012 19.0 0.0 3.6 2 2 3 5 5 5 3 Tetratricopeptide repeat TPR_12 PF13424.6 RKO90956.1 - 4.7e-09 36.4 0.0 0.0065 16.7 0.0 4.3 3 2 1 4 4 4 3 Tetratricopeptide repeat TPR_6 PF13174.6 RKO90956.1 - 2.6e-07 30.8 0.4 0.42 11.4 0.0 5.1 6 0 0 6 6 5 1 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO90956.1 - 9.5e-05 22.6 0.0 0.88 9.8 0.0 2.7 1 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 RKO90956.1 - 0.0001 22.0 0.1 28 5.0 0.0 5.4 6 0 0 6 6 6 0 Tetratricopeptide repeat NARP1 PF12569.8 RKO90956.1 - 0.00016 20.7 0.3 0.033 13.1 0.1 2.1 2 0 0 2 2 2 2 NMDA receptor-regulated protein 1 TPR_20 PF14561.6 RKO90956.1 - 0.0036 17.6 0.1 4.4 7.7 0.5 3.0 1 1 2 3 3 3 1 Tetratricopeptide repeat TPR_10 PF13374.6 RKO90956.1 - 0.0069 16.2 0.4 34 4.5 0.1 4.4 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_15 PF13429.6 RKO90956.1 - 0.029 13.6 0.1 2.2 7.4 0.0 2.6 1 1 2 3 3 3 0 Tetratricopeptide repeat SHNi-TPR PF10516.9 RKO90956.1 - 0.058 12.9 11.5 5.7 6.5 0.1 4.7 5 0 0 5 5 5 0 SHNi-TPR Glyco_trans_1_3 PF13528.6 RKO90957.1 - 5.7e-05 22.5 0.2 0.00023 20.5 0.1 1.9 3 0 0 3 3 3 1 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.16 RKO90957.1 - 0.0014 18.6 0.0 0.0025 17.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_4_4 PF13579.6 RKO90957.1 - 0.016 15.6 1.9 1.3 9.5 0.3 3.0 1 1 2 3 3 3 0 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 RKO90957.1 - 0.024 14.7 0.0 2.4 8.1 0.0 2.9 2 1 0 2 2 2 0 Glycosyltransferase Family 4 DUF2040 PF09745.9 RKO90958.1 - 6.5e-20 71.4 15.6 6.5e-20 71.4 15.6 3.8 2 1 0 2 2 2 1 Coiled-coil domain-containing protein 55 (DUF2040) Bunya_RdRp PF04196.12 RKO90958.1 - 0.31 9.3 1.8 3.3 6.0 1.2 2.0 2 0 0 2 2 2 0 Bunyavirus RNA dependent RNA polymerase RRM_1 PF00076.22 RKO90959.1 - 5.3e-06 26.2 0.0 7.9e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 RKO90959.1 - 0.057 13.5 0.0 0.082 13.0 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif Sugar_tr PF00083.24 RKO90960.1 - 1.2e-05 24.4 1.9 1.5e-05 24.1 1.9 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_5 PF05631.14 RKO90960.1 - 0.012 14.5 0.1 0.015 14.3 0.1 1.2 1 0 0 1 1 1 0 Sugar-tranasporters, 12 TM Pox_A21 PF05323.12 RKO90961.1 - 0.072 13.7 0.1 0.1 13.2 0.1 1.2 1 0 0 1 1 1 0 Poxvirus A21 Protein TMIE PF16038.5 RKO90961.1 - 0.084 12.7 0.8 0.14 12.0 0.8 1.3 1 0 0 1 1 1 0 TMIE protein SLATT_1 PF18181.1 RKO90961.1 - 0.23 11.4 0.5 0.51 10.3 0.1 1.8 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 Ribosomal_L32p PF01783.23 RKO90964.1 - 0.07 13.4 0.1 0.17 12.1 0.1 1.7 1 0 0 1 1 1 0 Ribosomal L32p protein family bacHORMA_2 PF18173.1 RKO90964.1 - 0.11 12.3 0.3 0.18 11.6 0.3 1.2 1 0 0 1 1 1 0 Bacterial HORMA domain 2 Fib_alpha PF08702.10 RKO90965.1 - 0.022 14.9 0.5 0.022 14.9 0.5 7.1 1 1 4 8 8 8 0 Fibrinogen alpha/beta chain family MTS_N PF08468.11 RKO90965.1 - 0.055 13.5 0.7 1.2 9.2 0.3 2.9 2 0 0 2 2 2 0 Methyltransferase small domain N-terminal RPN2_C PF18004.1 RKO90966.1 - 1.3 8.9 7.9 1 9.3 0.1 2.4 2 0 0 2 2 2 0 26S proteasome regulatory subunit RPN2 C-terminal domain Asp PF00026.23 RKO90969.1 - 4.9e-52 177.3 12.3 6.2e-52 177.0 12.3 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO90969.1 - 0.00098 19.4 8.5 0.011 16.0 4.8 3.0 2 1 0 2 2 2 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 RKO90969.1 - 0.0011 18.8 0.0 0.0066 16.2 0.0 2.1 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 RKO90969.1 - 0.092 13.4 1.0 27 5.5 0.0 2.9 2 0 0 2 2 2 0 Aspartyl protease zf-C3HC4_3 PF13920.6 RKO90970.1 - 0.00024 20.9 8.5 0.00037 20.3 8.5 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Na_trans_cytopl PF11933.8 RKO90970.1 - 1.8 8.3 7.0 0.46 10.3 0.1 2.4 2 0 0 2 2 2 0 Cytoplasmic domain of voltage-gated Na+ ion channel Kelch_4 PF13418.6 RKO90972.1 - 0.15 12.1 1.1 0.49 10.5 1.1 2.0 1 1 0 1 1 1 0 Galactose oxidase, central domain zf-C2H2 PF00096.26 RKO90973.1 - 0.082 13.4 2.4 0.082 13.4 2.4 5.7 5 1 0 5 5 5 0 Zinc finger, C2H2 type OrsD PF12013.8 RKO90973.1 - 0.1 13.0 11.6 1.2 9.6 1.6 3.2 3 0 0 3 3 3 0 Orsellinic acid/F9775 biosynthesis cluster protein D DUF5579 PF17742.1 RKO90973.1 - 0.3 10.6 5.9 3.2 7.2 0.2 2.8 1 1 2 3 3 3 0 Family of unknown function (DUF5579) zf-H2C2_2 PF13465.6 RKO90973.1 - 0.41 11.2 29.3 0.64 10.5 2.5 4.5 3 1 1 4 4 4 0 Zinc-finger double domain zf-C2H2_8 PF15909.5 RKO90973.1 - 1.5 9.1 13.8 1.3 9.4 5.0 2.3 1 1 1 2 2 2 0 C2H2-type zinc ribbon DUF3929 PF13066.6 RKO90975.1 - 0.021 14.8 0.2 0.082 13.0 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3929) SBDS PF01172.18 RKO90976.1 - 4e-10 39.6 0.0 5.2e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein Vps35 PF03635.17 RKO90980.1 - 1.1e-286 953.1 0.0 1.3e-286 952.9 0.0 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 35 Ribonuc_L-PSP PF01042.21 RKO90980.1 - 0.06 13.4 0.0 0.19 11.7 0.0 1.8 1 0 0 1 1 1 0 Endoribonuclease L-PSP DUF758 PF05527.11 RKO90980.1 - 0.91 9.5 5.9 0.11 12.4 0.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF758) Cpn60_TCP1 PF00118.24 RKO90983.1 - 1.5e-173 577.9 1.5 1.7e-173 577.7 1.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family UBA PF00627.31 RKO90986.1 - 0.0011 18.8 0.0 0.59 10.1 0.0 2.4 2 0 0 2 2 2 2 UBA/TS-N domain HOIP-UBA PF16678.5 RKO90986.1 - 0.073 13.1 0.1 3.5 7.6 0.0 2.1 2 0 0 2 2 2 0 HOIP UBA domain pair CENP-T_C PF15511.6 RKO90989.1 - 1.6e-08 34.7 0.0 1.9e-08 34.4 0.0 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TAF PF02969.17 RKO90989.1 - 9.7e-05 22.5 0.1 0.00014 21.9 0.1 1.4 1 1 0 1 1 1 1 TATA box binding protein associated factor (TAF) CBFD_NFYB_HMF PF00808.23 RKO90989.1 - 0.00021 21.5 0.1 0.00038 20.7 0.1 1.6 1 1 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone CENP-S PF15630.6 RKO90989.1 - 0.00021 21.6 0.1 0.0003 21.1 0.1 1.3 1 1 0 1 1 1 1 CENP-S protein Histone PF00125.24 RKO90989.1 - 0.00023 21.5 0.3 0.00026 21.3 0.3 1.3 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 RKO90989.1 - 0.013 15.5 0.0 0.016 15.3 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Bromo_TP PF07524.13 RKO90989.1 - 0.02 14.9 0.1 0.032 14.3 0.1 1.3 1 0 0 1 1 1 0 Bromodomain associated UPF0137 PF03677.13 RKO90989.1 - 0.061 13.1 0.2 0.068 13.0 0.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0137) PSRT PF07636.11 RKO90990.1 - 0.016 14.9 6.5 0.046 13.4 6.5 1.9 1 0 0 1 1 1 0 PSRT PAF PF15715.5 RKO90991.1 - 0.001 19.7 2.2 0.0011 19.6 2.2 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain Histone PF00125.24 RKO90991.1 - 0.085 13.2 0.4 0.095 13.1 0.4 1.0 1 0 0 1 1 1 0 Core histone H2A/H2B/H3/H4 AIG1 PF04548.16 RKO90992.1 - 0.00018 20.9 0.5 0.095 12.0 0.1 2.4 2 0 0 2 2 2 2 AIG1 family Septin PF00735.18 RKO90992.1 - 0.00039 19.8 0.7 0.65 9.2 0.0 2.3 2 0 0 2 2 2 2 Septin G-alpha PF00503.20 RKO90992.1 - 0.03 13.5 0.4 0.093 11.9 0.2 1.9 2 0 0 2 2 2 0 G-protein alpha subunit Ima1_N PF09779.9 RKO90995.1 - 0.096 13.5 0.1 0.096 13.5 0.1 2.7 1 1 2 3 3 3 0 Ima1 N-terminal domain YABBY PF04690.13 RKO90995.1 - 0.12 12.9 0.9 0.18 12.4 0.1 1.7 2 0 0 2 2 2 0 YABBY protein Integrase_H2C2 PF17921.1 RKO90998.1 - 0.017 15.3 0.1 0.032 14.3 0.1 1.4 1 0 0 1 1 1 0 Integrase zinc binding domain Hist_deacetyl PF00850.19 RKO91000.1 - 1.9e-56 191.8 0.0 2.7e-56 191.3 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain DUF3886 PF13025.6 RKO91001.1 - 0.034 14.3 0.4 0.051 13.8 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3886) PQQ_2 PF13360.6 RKO91006.1 - 2.7e-10 40.2 0.1 2.3e-07 30.6 0.1 2.7 2 1 0 2 2 2 2 PQQ-like domain PQQ_3 PF13570.6 RKO91006.1 - 7.3e-10 39.0 1.8 0.0014 19.1 0.1 6.1 7 0 0 7 7 7 2 PQQ-like domain WD40 PF00400.32 RKO91006.1 - 1.6e-07 31.9 6.7 0.0011 19.8 0.1 5.3 5 1 0 5 5 5 2 WD domain, G-beta repeat PD40 PF07676.12 RKO91006.1 - 0.00011 22.0 0.0 0.82 9.7 0.0 3.9 4 0 0 4 4 4 2 WD40-like Beta Propeller Repeat PQQ PF01011.21 RKO91006.1 - 0.023 14.6 2.2 5.9 7.0 0.1 4.8 5 1 0 6 6 6 0 PQQ enzyme repeat PNPase_C PF12111.8 RKO91007.1 - 4.8 6.7 7.0 1.2e+02 2.2 0.1 4.5 4 0 0 4 4 4 0 Polyribonucleotide phosphorylase C terminal Rad51 PF08423.11 RKO91008.1 - 1.4e-43 149.0 0.0 2e-43 148.5 0.0 1.2 1 0 0 1 1 1 1 Rad51 AAA_25 PF13481.6 RKO91008.1 - 4.9e-11 42.6 0.0 1.2e-10 41.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain ATPase PF06745.13 RKO91008.1 - 8e-07 28.6 0.0 1.6e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 KaiC RecA PF00154.21 RKO91008.1 - 5.7e-06 26.0 0.2 0.0097 15.4 0.0 2.1 2 0 0 2 2 2 2 recA bacterial DNA recombination protein AAA_22 PF13401.6 RKO91008.1 - 0.0063 16.8 0.0 0.011 16.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 RKO91008.1 - 0.084 12.8 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea RNA_helicase PF00910.22 RKO91008.1 - 0.22 11.9 0.0 0.42 11.0 0.0 1.4 1 0 0 1 1 1 0 RNA helicase PPR_2 PF13041.6 RKO91009.1 - 3.1e-16 59.3 0.0 8.8e-06 25.8 0.0 5.8 3 2 3 6 6 6 4 PPR repeat family PPR_3 PF13812.6 RKO91009.1 - 1.9e-10 40.7 0.0 0.00048 20.1 0.0 3.5 3 1 1 4 4 4 3 Pentatricopeptide repeat domain PPR PF01535.20 RKO91009.1 - 6.5e-10 38.6 0.1 0.0021 18.2 0.0 5.4 6 0 0 6 6 6 2 PPR repeat PPR_long PF17177.4 RKO91009.1 - 9.2e-07 28.4 0.1 0.0027 17.1 0.0 2.4 2 1 0 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 RKO91009.1 - 0.0011 18.6 0.0 9.3 6.0 0.0 4.8 6 0 0 6 6 6 1 PPR repeat WES_acyltransf PF03007.16 RKO91009.1 - 0.062 13.1 0.0 0.18 11.6 0.0 1.7 1 0 0 1 1 1 0 Wax ester synthase-like Acyl-CoA acyltransferase domain Av_adeno_fibre PF06536.11 RKO91012.1 - 0.038 13.9 0.0 0.074 12.9 0.0 1.4 1 0 0 1 1 1 0 Avian adenovirus fibre, N-terminal HNH_2 PF13391.6 RKO91013.1 - 7.3e-10 38.8 0.0 1.3e-09 38.1 0.0 1.4 1 0 0 1 1 1 1 HNH endonuclease DUF5005 PF16396.5 RKO91013.1 - 0.078 11.7 0.0 0.11 11.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5005) Ytp1 PF10355.9 RKO91014.1 - 4.8e-37 127.7 18.0 1.9e-35 122.4 18.0 3.3 1 1 0 1 1 1 1 Protein of unknown function (Ytp1) DUF2427 PF10348.9 RKO91014.1 - 4.6e-19 68.1 0.4 4.6e-19 68.1 0.4 2.7 3 0 0 3 3 3 1 Domain of unknown function (DUF2427) Cytochrom_B561 PF03188.16 RKO91014.1 - 0.0021 18.2 3.9 0.0021 18.2 3.9 3.0 2 1 0 2 2 2 1 Eukaryotic cytochrome b561 DDE_Tnp_4 PF13359.6 RKO91017.1 - 0.16 11.6 0.0 0.41 10.3 0.0 1.6 2 0 0 2 2 2 0 DDE superfamily endonuclease TFIIF_alpha PF05793.12 RKO91019.1 - 1.5 7.4 6.5 1.9 7.0 6.5 1.0 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Myotub-related PF06602.14 RKO91021.1 - 7.8e-81 271.7 0.0 3.7e-75 253.0 0.0 2.1 2 0 0 2 2 2 2 Myotubularin-like phosphatase domain Y_phosphatase PF00102.27 RKO91021.1 - 0.056 13.0 0.0 0.092 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Glyco_hydro_31 PF01055.26 RKO91022.1 - 9.6e-73 245.8 0.0 1.2e-72 245.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 RKO91022.1 - 1.4e-15 57.4 0.0 3e-15 56.3 0.0 1.7 1 0 0 1 1 1 1 Galactose mutarotase-like MBOAT PF03062.19 RKO91026.1 - 1.6e-24 87.0 14.0 2.8e-24 86.1 14.0 1.3 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family DUF155 PF02582.14 RKO91027.1 - 1.9e-45 155.1 0.0 2.1e-45 154.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ACR, YagE family COG1723 EutC PF05985.11 RKO91027.1 - 0.025 13.9 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 Ethanolamine ammonia-lyase light chain (EutC) Peptidase_M3 PF01432.20 RKO91028.1 - 6.3e-106 355.4 0.0 1.3e-104 351.1 0.0 2.1 1 1 0 1 1 1 1 Peptidase family M3 Peptidase_M50B PF13398.6 RKO91028.1 - 0.033 13.8 0.2 0.056 13.1 0.2 1.3 1 0 0 1 1 1 0 Peptidase M50B-like PheRS_DBD3 PF18553.1 RKO91029.1 - 1.7e-14 53.8 1.0 3.1e-14 53.0 0.3 1.7 2 0 0 2 2 2 1 PheRS DNA binding domain 3 Trp_oprn_chp PF09534.10 RKO91030.1 - 0.037 13.8 0.1 0.057 13.2 0.1 1.3 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Kelch_6 PF13964.6 RKO91031.1 - 0.00022 21.4 3.9 0.97 9.8 0.1 3.8 4 0 0 4 4 4 2 Kelch motif Kelch_1 PF01344.25 RKO91031.1 - 0.0059 16.2 3.6 3 7.5 0.2 3.4 3 0 0 3 3 3 2 Kelch motif Kelch_5 PF13854.6 RKO91031.1 - 0.052 13.6 2.6 5.9 7.0 0.0 3.0 3 0 0 3 3 3 0 Kelch motif Kelch_4 PF13418.6 RKO91031.1 - 0.34 10.9 2.3 13 5.8 0.0 3.5 4 0 0 4 4 4 0 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO91032.1 - 0.0087 15.6 0.1 0.26 10.9 0.1 2.6 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 RKO91032.1 - 0.015 15.6 0.4 4.7 7.7 0.1 2.6 2 0 0 2 2 2 0 Kelch motif SKG6 PF08693.10 RKO91032.1 - 0.062 12.7 1.0 0.13 11.7 1.0 1.5 1 0 0 1 1 1 0 Transmembrane alpha-helix domain EF-hand_6 PF13405.6 RKO91033.1 - 0.095 12.7 0.9 0.16 11.9 0.9 1.3 1 0 0 1 1 1 0 EF-hand domain EF-hand_1 PF00036.32 RKO91033.1 - 0.15 11.7 0.9 0.26 10.9 0.9 1.4 1 0 0 1 1 1 0 EF hand EF-hand_5 PF13202.6 RKO91033.1 - 0.17 11.4 2.2 0.26 10.9 2.2 1.3 1 0 0 1 1 1 0 EF hand Thioredoxin PF00085.20 RKO91035.1 - 2.4e-21 75.6 0.0 2.6e-21 75.6 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 RKO91035.1 - 6e-05 23.5 0.3 0.00048 20.5 0.3 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain OST3_OST6 PF04756.13 RKO91035.1 - 0.00011 21.7 0.0 0.00013 21.5 0.0 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_8 PF13905.6 RKO91035.1 - 0.00012 22.4 0.0 0.00028 21.2 0.0 1.4 1 1 1 2 2 2 1 Thioredoxin-like AhpC-TSA PF00578.21 RKO91035.1 - 0.022 14.6 0.1 0.034 14.0 0.1 1.3 1 1 1 2 2 2 0 AhpC/TSA family Thioredoxin_9 PF14595.6 RKO91035.1 - 0.048 13.4 0.0 0.05 13.4 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin Thioredoxin_7 PF13899.6 RKO91035.1 - 0.051 13.8 0.0 0.073 13.3 0.0 1.3 1 1 0 1 1 1 0 Thioredoxin-like Phosducin PF02114.16 RKO91035.1 - 0.074 12.0 0.0 0.089 11.7 0.0 1.0 1 0 0 1 1 1 0 Phosducin FKBP_C PF00254.28 RKO91036.1 - 2e-31 108.1 0.0 2.2e-31 108.0 0.0 1.0 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase PB1 PF00564.24 RKO91037.1 - 1.1e-11 44.6 0.0 3.2e-11 43.0 0.0 1.8 2 0 0 2 2 2 1 PB1 domain UPF0449 PF15136.6 RKO91037.1 - 0.0098 16.3 0.6 0.017 15.6 0.6 1.4 1 0 0 1 1 1 1 Uncharacterised protein family UPF0449 DUF1929 PF09118.11 RKO91038.1 - 7.8e-24 83.8 0.5 2.3e-23 82.3 0.1 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF1929) Glyoxal_oxid_N PF07250.11 RKO91038.1 - 9.3e-14 51.2 0.0 2e-11 43.5 0.1 3.3 3 1 0 3 3 3 2 Glyoxal oxidase N-terminus Kelch_2 PF07646.15 RKO91038.1 - 0.089 12.8 2.9 5.2 7.2 0.0 4.5 4 1 0 4 4 4 0 Kelch motif Kelch_3 PF13415.6 RKO91038.1 - 0.11 12.8 4.0 2.1 8.7 0.0 3.8 4 0 0 4 4 4 0 Galactose oxidase, central domain MMS1_N PF10433.9 RKO91040.1 - 3e-14 52.5 0.0 1.2e-07 30.7 0.0 3.0 3 1 0 3 3 3 2 Mono-functional DNA-alkylating methyl methanesulfonate N-term NHR2 PF08788.11 RKO91042.1 - 0.44 10.3 0.1 0.44 10.3 0.1 2.7 3 1 1 4 4 4 0 NHR2 domain like Peptidase_S10 PF00450.22 RKO91045.1 - 8.7e-49 167.0 0.1 1.1e-48 166.7 0.1 1.1 1 0 0 1 1 1 1 Serine carboxypeptidase zf-MYND PF01753.18 RKO91049.1 - 1.8e-06 27.9 15.7 4.9e-06 26.5 15.4 1.9 1 1 0 1 1 1 1 MYND finger zf-Mss51 PF13824.6 RKO91049.1 - 0.17 12.0 6.6 0.45 10.7 6.6 1.7 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 LacAB_rpiB PF02502.18 RKO91051.1 - 2.2e-44 150.8 0.8 1.9e-32 112.2 0.3 2.0 2 0 0 2 2 2 2 Ribose/Galactose Isomerase DUF4971 PF16341.5 RKO91051.1 - 0.14 12.0 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4971) FAD-oxidase_C PF02913.19 RKO91052.1 - 5.1e-61 206.5 0.1 6.7e-61 206.1 0.1 1.1 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 RKO91052.1 - 1.8e-36 124.9 0.3 3.8e-36 123.9 0.0 1.7 2 0 0 2 2 2 1 FAD binding domain PEP-utilisers_N PF05524.13 RKO91052.1 - 0.17 12.1 0.1 0.46 10.7 0.0 1.7 1 1 0 1 1 1 0 PEP-utilising enzyme, N-terminal NIF PF03031.18 RKO91053.1 - 7.9e-14 51.7 0.0 1.3e-13 51.0 0.0 1.4 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase ubiquitin PF00240.23 RKO91053.1 - 8.4e-06 25.4 0.1 1.7e-05 24.5 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin family Bactofilin PF04519.13 RKO91055.1 - 0.29 11.4 3.4 0.3 11.4 0.6 2.4 3 0 0 3 3 3 0 Polymer-forming cytoskeletal BUD22 PF09073.10 RKO91056.1 - 0.022 14.2 7.2 0.027 13.9 7.2 1.1 1 0 0 1 1 1 0 BUD22 Cwf_Cwc_15 PF04889.12 RKO91056.1 - 0.024 14.4 16.0 0.038 13.7 16.0 1.3 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Sigma70_ner PF04546.13 RKO91056.1 - 0.07 13.0 11.3 0.079 12.8 10.5 1.6 2 0 0 2 2 2 0 Sigma-70, non-essential region Activator_LAG-3 PF11498.8 RKO91056.1 - 0.45 9.4 5.3 0.057 12.4 0.4 1.8 2 0 0 2 2 2 0 Transcriptional activator LAG-3 FAM176 PF14851.6 RKO91056.1 - 0.81 9.3 6.6 1.6 8.4 6.6 1.4 1 0 0 1 1 1 0 FAM176 family SDA1 PF05285.12 RKO91056.1 - 3 7.2 12.4 3.8 6.8 12.4 1.1 1 0 0 1 1 1 0 SDA1 RXT2_N PF08595.11 RKO91056.1 - 7.9 6.5 10.0 14 5.7 10.0 1.4 1 0 0 1 1 1 0 RXT2-like, N-terminal Nop14 PF04147.12 RKO91056.1 - 8.1 4.5 14.4 9.6 4.3 14.4 1.1 1 0 0 1 1 1 0 Nop14-like family PhoLip_ATPase_C PF16212.5 RKO91057.1 - 4.5e-76 255.9 22.6 5.4e-76 255.6 22.6 1.1 1 0 0 1 1 1 1 Phospholipid-translocating P-type ATPase C-terminal Hydrolase PF00702.26 RKO91057.1 - 6.3e-08 33.2 0.1 0.0033 17.7 0.0 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 RKO91057.1 - 0.00043 20.1 0.3 0.0014 18.4 0.2 1.7 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Pkinase PF00069.25 RKO91059.1 - 2.1e-14 53.5 0.0 2.3e-14 53.4 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91059.1 - 2.3e-05 23.8 0.0 2.4e-05 23.7 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Imm7 PF15585.6 RKO91059.1 - 0.12 12.7 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 7 Pyr_redox_2 PF07992.14 RKO91060.1 - 3.4e-49 167.7 0.1 4.3e-49 167.3 0.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 RKO91060.1 - 4.2e-16 59.3 0.0 1.2e-14 54.7 0.0 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 RKO91060.1 - 4.2e-14 52.5 0.0 2e-12 47.0 0.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 RKO91060.1 - 0.00078 18.9 0.5 0.017 14.5 0.2 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 RKO91060.1 - 0.007 15.6 0.9 0.022 14.0 0.1 2.1 2 1 0 3 3 3 1 Thi4 family K_oxygenase PF13434.6 RKO91060.1 - 0.008 15.4 0.0 0.031 13.4 0.0 1.9 2 1 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_8 PF13450.6 RKO91060.1 - 0.0092 16.2 0.5 0.15 12.4 0.1 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 RKO91060.1 - 0.053 14.0 0.1 0.44 11.0 0.0 2.3 2 1 0 2 2 2 0 Putative NAD(P)-binding FAD_binding_2 PF00890.24 RKO91060.1 - 0.14 11.2 2.1 0.37 9.8 0.4 2.4 2 1 1 3 3 3 0 FAD binding domain DUF2833 PF11090.8 RKO91060.1 - 0.19 12.1 0.0 0.36 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2833) GIDA PF01134.22 RKO91060.1 - 0.27 10.3 1.4 1.4 7.9 0.3 2.6 4 0 0 4 4 4 0 Glucose inhibited division protein A Pkinase_Tyr PF07714.17 RKO91062.1 - 5.2e-21 75.1 0.0 4.4e-13 49.1 0.0 3.0 3 0 0 3 3 3 3 Protein tyrosine kinase Pkinase PF00069.25 RKO91062.1 - 3.3e-12 46.4 0.0 1.8e-11 43.9 0.0 1.9 2 0 0 2 2 2 1 Protein kinase domain ENOD40 PF08247.11 RKO91062.1 - 0.065 13.2 0.7 0.14 12.2 0.7 1.6 1 0 0 1 1 1 0 ENOD40 protein PIGA PF08288.12 RKO91063.1 - 3.9e-42 142.8 1.0 1.1e-41 141.2 1.0 1.9 1 0 0 1 1 1 1 PIGA (GPI anchor biosynthesis) Glyco_transf_4 PF13439.6 RKO91063.1 - 7.8e-28 97.6 2.9 1.4e-27 96.7 2.9 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 RKO91063.1 - 1.3e-23 83.4 0.0 2.1e-23 82.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 RKO91063.1 - 2.4e-23 83.0 0.1 4.6e-23 82.1 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 RKO91063.1 - 2e-13 51.1 0.1 4.7e-13 49.9 0.1 1.7 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 RKO91063.1 - 1.8e-06 28.0 0.1 3.2e-06 27.2 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 RKO91063.1 - 0.00059 20.2 0.1 0.0095 16.3 0.0 2.4 2 0 0 2 2 2 1 Glycosyl transferases group 1 GST_C PF00043.25 RKO91063.1 - 0.1 12.8 0.0 0.32 11.2 0.0 1.8 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain NPV_P10 PF05531.12 RKO91064.1 - 0.0014 19.0 15.9 3.2 8.3 0.5 6.4 4 1 3 7 7 7 2 Nucleopolyhedrovirus P10 protein F_actin_bind PF08919.10 RKO91064.1 - 0.0019 18.3 4.1 0.0067 16.5 0.2 3.2 3 0 0 3 3 3 1 F-actin binding DUF5131 PF07505.11 RKO91064.1 - 0.024 14.1 1.8 0.22 11.0 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF5131) Snapin_Pallidin PF14712.6 RKO91064.1 - 0.042 14.3 12.8 7.1 7.1 1.3 6.1 5 1 2 7 7 7 0 Snapin/Pallidin Lzipper-MIP1 PF14389.6 RKO91064.1 - 0.1 12.9 4.2 0.63 10.4 0.0 4.1 5 1 0 5 5 5 0 Leucine-zipper of ternary complex factor MIP1 CSN5_C PF18323.1 RKO91064.1 - 0.16 12.9 9.2 15 6.6 0.2 4.9 4 1 0 4 4 4 0 Cop9 signalosome subunit 5 C-terminal domain DUF4083 PF13314.6 RKO91064.1 - 0.24 11.4 1.7 25 4.9 0.1 4.0 4 0 0 4 4 4 0 Domain of unknown function (DUF4083) SATase_N PF06426.14 RKO91064.1 - 0.44 11.0 9.1 1.3 9.4 0.5 3.9 2 2 2 4 4 4 0 Serine acetyltransferase, N-terminal ABC_tran_CTD PF16326.5 RKO91064.1 - 0.47 10.8 25.3 4.4 7.6 0.6 6.8 7 1 1 8 8 8 0 ABC transporter C-terminal domain Gp-FAR-1 PF05823.12 RKO91064.1 - 0.49 10.8 7.6 0.84 10.0 0.7 3.1 3 1 0 3 3 3 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Allexi_40kDa PF05549.11 RKO91064.1 - 2.1 7.8 12.6 2.3 7.7 0.6 4.3 2 1 3 5 5 5 0 Allexivirus 40kDa protein Cob_adeno_trans PF01923.18 RKO91064.1 - 2.4 8.3 6.1 8.8 6.4 0.2 3.7 1 1 2 3 3 3 0 Cobalamin adenosyltransferase XhlA PF10779.9 RKO91064.1 - 7.8 6.8 21.2 5.9 7.2 0.4 6.8 8 1 1 9 9 9 0 Haemolysin XhlA HSP20 PF00011.21 RKO91066.1 - 9.9e-20 70.6 0.5 1.1e-19 70.5 0.5 1.0 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 RKO91066.1 - 2.8e-11 42.8 0.0 4.1e-11 42.3 0.0 1.3 1 1 0 1 1 1 1 HSP20-like domain found in ArsA GvpH PF05455.11 RKO91066.1 - 0.015 15.4 0.3 0.075 13.1 0.3 1.9 1 1 0 1 1 1 0 GvpH FKBP26_C PF18046.1 RKO91066.1 - 0.081 13.0 0.1 0.27 11.4 0.0 1.8 2 0 0 2 2 2 0 FKBP26_C-terminal SH3_9 PF14604.6 RKO91069.1 - 0.0016 18.3 0.0 0.0039 17.0 0.0 1.7 2 0 0 2 2 2 1 Variant SH3 domain LapA_dom PF06305.11 RKO91069.1 - 0.018 14.8 0.2 0.032 14.0 0.2 1.4 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain SH3_2 PF07653.17 RKO91069.1 - 0.038 13.7 0.0 0.078 12.7 0.0 1.5 1 0 0 1 1 1 0 Variant SH3 domain CoA_trans PF01144.23 RKO91070.1 - 6.7e-25 87.8 0.2 3e-13 49.7 0.1 2.1 1 1 1 2 2 2 2 Coenzyme A transferase Peptidase_M64 PF09471.10 RKO91070.1 - 0.078 12.5 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 IgA Peptidase M64 ABC_membrane PF00664.23 RKO91071.1 - 5.2e-65 219.8 28.1 1.2e-35 123.5 8.8 2.9 3 1 0 3 3 3 2 ABC transporter transmembrane region ABC_tran PF00005.27 RKO91071.1 - 2.4e-44 151.2 0.0 2.7e-27 95.9 0.0 2.6 2 1 0 2 2 2 2 ABC transporter SMC_N PF02463.19 RKO91071.1 - 1.3e-09 37.9 0.0 0.011 15.2 0.0 3.7 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 RKO91071.1 - 1e-05 25.2 0.6 0.023 14.4 0.1 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 RKO91071.1 - 3.5e-05 24.2 1.5 0.09 13.2 0.0 3.0 2 1 0 2 2 2 2 AAA ATPase domain T2SSE PF00437.20 RKO91071.1 - 0.00023 20.3 1.0 0.11 11.5 0.6 2.6 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_23 PF13476.6 RKO91071.1 - 0.00031 21.3 1.7 0.015 15.8 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 RKO91071.1 - 0.00079 19.1 0.5 0.18 11.4 0.1 2.5 2 0 0 2 2 2 1 AAA domain AAA_21 PF13304.6 RKO91071.1 - 0.00088 19.2 3.7 2.8 7.6 0.1 3.7 4 0 0 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 RKO91071.1 - 0.0012 18.9 1.5 0.99 9.5 0.3 2.7 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_22 PF13401.6 RKO91071.1 - 0.01 16.1 3.0 4.4 7.6 0.4 3.8 4 0 0 4 4 4 0 AAA domain RsgA_GTPase PF03193.16 RKO91071.1 - 0.029 14.3 0.3 8.1 6.3 0.1 2.4 2 0 0 2 2 2 0 RsgA GTPase BCA_ABC_TP_C PF12399.8 RKO91071.1 - 0.05 13.5 0.5 0.11 12.4 0.5 1.6 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter IstB_IS21 PF01695.17 RKO91071.1 - 0.08 12.7 0.9 3.7 7.2 0.0 3.0 4 0 0 4 4 3 0 IstB-like ATP binding protein AAA_24 PF13479.6 RKO91071.1 - 0.08 12.6 0.3 1.5 8.5 0.0 2.5 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 RKO91071.1 - 0.11 11.7 2.2 5.1 6.3 0.4 2.4 2 0 0 2 2 2 0 Zeta toxin Dynamin_N PF00350.23 RKO91071.1 - 0.15 12.1 0.7 7.1 6.7 0.0 2.4 2 0 0 2 2 2 0 Dynamin family FtsK_SpoIIIE PF01580.18 RKO91071.1 - 0.2 11.0 0.6 7.9 5.7 0.2 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family DUF87 PF01935.17 RKO91071.1 - 0.22 11.6 3.2 3.3 7.7 0.1 2.4 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_7 PF12775.7 RKO91071.1 - 0.23 11.0 0.4 8.6 5.8 0.1 2.3 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_18 PF13238.6 RKO91071.1 - 0.3 11.6 0.8 11 6.6 0.1 2.5 2 0 0 2 2 2 0 AAA domain DUF2075 PF09848.9 RKO91071.1 - 0.85 8.8 2.1 1.5 7.9 0.1 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) cobW PF02492.19 RKO91071.1 - 5.6 6.5 5.3 1.8 8.1 0.5 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Metallophos PF00149.28 RKO91073.1 - 2.7e-10 41.1 3.1 3.7e-10 40.7 3.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 RKO91073.1 - 0.00033 20.9 0.1 0.0031 17.7 0.1 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Actin PF00022.19 RKO91073.1 - 0.22 10.1 0.0 0.28 9.7 0.0 1.1 1 0 0 1 1 1 0 Actin Pkinase PF00069.25 RKO91080.1 - 6.6e-16 58.5 0.0 8e-16 58.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91080.1 - 1.2e-05 24.7 0.0 1.5e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO91080.1 - 0.0014 18.6 0.0 0.3 11.0 0.1 2.0 1 1 1 2 2 2 2 Phosphotransferase enzyme family FTA2 PF13095.6 RKO91080.1 - 0.079 12.6 0.0 0.082 12.5 0.0 1.2 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 bZIP_C PF12498.8 RKO91082.1 - 6 7.9 7.7 3.9 8.5 2.4 2.6 2 1 0 2 2 2 0 Basic leucine-zipper C terminal Sortilin-Vps10 PF15902.5 RKO91083.1 - 2.6e-06 26.5 5.1 0.0093 14.8 2.4 2.8 1 1 0 2 2 2 2 Sortilin, neurotensin receptor 3, BNR_6 PF15899.5 RKO91083.1 - 0.044 13.8 1.8 0.19 11.9 0.1 3.2 3 0 0 3 3 3 0 BNR-Asp box repeat BNR PF02012.20 RKO91083.1 - 0.28 11.3 16.7 0.41 10.8 0.8 6.4 6 0 0 6 6 6 0 BNR/Asp-box repeat Kelch_4 PF13418.6 RKO91084.1 - 1.1e-17 63.8 8.4 2.8e-08 33.6 0.2 4.2 3 0 0 3 3 3 3 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO91084.1 - 8e-11 41.7 1.2 0.16 12.0 0.0 5.5 5 0 0 5 5 5 3 Kelch motif Kelch_3 PF13415.6 RKO91084.1 - 5.8e-10 39.2 28.6 2.1e-08 34.2 1.4 5.8 6 0 0 6 6 6 3 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO91084.1 - 1.9e-09 37.5 7.5 0.034 14.5 0.1 5.1 4 1 1 5 5 5 3 Kelch motif Kelch_1 PF01344.25 RKO91084.1 - 0.00019 20.9 4.3 0.03 13.9 0.0 3.9 4 0 0 4 4 4 2 Kelch motif SH3_9 PF14604.6 RKO91084.1 - 0.1 12.5 0.0 0.24 11.3 0.0 1.6 1 0 0 1 1 1 0 Variant SH3 domain SH3_1 PF00018.28 RKO91084.1 - 0.12 12.0 0.0 0.25 11.0 0.0 1.4 1 0 0 1 1 1 0 SH3 domain SKG6 PF08693.10 RKO91084.1 - 0.15 11.5 10.8 0.061 12.7 1.0 2.9 2 0 0 2 2 2 0 Transmembrane alpha-helix domain Kelch_4 PF13418.6 RKO91085.1 - 2.4e-11 43.4 8.4 5.8e-05 23.0 0.3 4.3 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO91085.1 - 9.7e-10 38.2 1.2 0.0025 17.8 0.0 3.3 3 0 0 3 3 3 2 Kelch motif Kelch_3 PF13415.6 RKO91085.1 - 1.7e-05 25.0 12.0 0.0083 16.4 0.3 4.0 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO91085.1 - 0.0066 16.0 0.1 0.4 10.3 0.0 2.7 2 0 0 2 2 2 1 Kelch motif FANCAA PF15146.6 RKO91086.1 - 0.0068 15.5 0.0 0.027 13.6 0.0 1.7 1 1 1 2 2 2 1 Fanconi anemia-associated PQQ_3 PF13570.6 RKO91086.1 - 0.12 12.9 0.3 1 9.9 0.0 2.5 2 0 0 2 2 2 0 PQQ-like domain EccE PF11203.8 RKO91086.1 - 0.16 12.3 1.6 0.94 9.9 0.2 2.6 2 0 0 2 2 2 0 Putative type VII ESX secretion system translocon, EccE U3_assoc_6 PF08640.11 RKO91087.1 - 2.2e-30 104.5 3.8 2.2e-30 104.5 3.8 1.5 2 0 0 2 2 2 1 U3 small nucleolar RNA-associated protein 6 TPR_14 PF13428.6 RKO91087.1 - 9.8e-07 29.1 0.0 0.19 12.6 0.0 3.6 2 1 1 3 3 3 2 Tetratricopeptide repeat DUF3883 PF13020.6 RKO91092.1 - 2.5e-13 49.9 0.0 1.5e-12 47.4 0.0 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF3883) WD40 PF00400.32 RKO91094.1 - 2.2e-18 66.3 14.0 0.00045 21.0 0.0 9.1 10 0 0 10 10 10 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO91094.1 - 6.3e-14 52.0 0.0 5.9e-05 23.3 0.0 6.3 3 3 4 7 7 7 3 Anaphase-promoting complex subunit 4 WD40 domain Frtz PF11768.8 RKO91094.1 - 0.15 10.3 0.0 0.33 9.2 0.0 1.4 1 0 0 1 1 1 0 WD repeat-containing and planar cell polarity effector protein Fritz AT_hook PF02178.19 RKO91096.1 - 0.024 14.5 4.1 0.19 11.7 4.1 2.8 1 0 0 1 1 1 0 AT hook motif HMMR_N PF15905.5 RKO91097.1 - 0.0017 17.9 16.8 0.0017 17.9 16.8 1.6 1 1 1 2 2 2 1 Hyaluronan mediated motility receptor N-terminal Baculo_PEP_C PF04513.12 RKO91097.1 - 0.0026 17.8 9.9 0.0054 16.8 6.6 2.1 1 1 1 2 2 2 1 Baculovirus polyhedron envelope protein, PEP, C terminus T3SS_needle_F PF09392.10 RKO91097.1 - 0.04 14.1 3.9 0.04 14.1 3.9 3.0 4 0 0 4 4 4 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF FliD_C PF07195.12 RKO91097.1 - 0.22 10.9 16.5 0.045 13.2 5.9 2.1 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus HNHc_6 PF16784.5 RKO91097.1 - 0.34 10.4 3.8 9.3 5.7 0.0 2.4 1 1 0 2 2 2 0 Putative HNHc nuclease FapA PF03961.13 RKO91097.1 - 0.58 8.7 12.2 0.33 9.5 10.3 1.5 1 1 0 1 1 1 0 Flagellar Assembly Protein A Matrilin_ccoil PF10393.9 RKO91097.1 - 0.84 9.6 4.9 11 6.0 0.1 3.3 3 0 0 3 3 3 0 Trimeric coiled-coil oligomerisation domain of matrilin MCC-bdg_PDZ PF10506.9 RKO91097.1 - 1.4 9.0 9.3 0.62 10.1 0.6 3.0 1 1 1 2 2 2 0 PDZ domain of MCC-2 bdg protein for Usher syndrome DUF16 PF01519.16 RKO91097.1 - 1.6 9.2 14.0 4.1 7.9 4.8 2.5 1 1 1 2 2 2 0 Protein of unknown function DUF16 ALMT PF11744.8 RKO91097.1 - 1.7 7.4 11.5 2 7.1 11.5 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter Nre_C PF04895.12 RKO91097.1 - 3.3 7.7 8.5 0.82 9.6 0.4 2.9 1 1 3 4 4 4 0 Archaeal Nre, C-terminal Exonuc_VII_L PF02601.15 RKO91097.1 - 4.1 6.9 18.7 11 5.5 18.4 1.7 1 1 0 1 1 1 0 Exonuclease VII, large subunit OmpH PF03938.14 RKO91097.1 - 9.5 6.6 21.4 4.3e+02 1.2 0.9 2.8 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) DUF21 PF01595.20 RKO91099.1 - 1.8e-37 128.8 0.2 2.6e-37 128.2 0.2 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CBS PF00571.28 RKO91099.1 - 8.7e-06 26.1 1.2 0.12 12.8 0.1 3.3 3 0 0 3 3 3 2 CBS domain GCIP PF13324.6 RKO91100.1 - 1.6e-27 96.8 0.2 2.2e-27 96.3 0.2 1.1 1 0 0 1 1 1 1 Grap2 and cyclin-D-interacting FlgN PF05130.12 RKO91100.1 - 0.49 10.9 2.4 6.5 7.3 1.4 2.3 2 0 0 2 2 2 0 FlgN protein Nup35_RRM PF05172.13 RKO91103.1 - 0.00025 20.9 0.0 0.00063 19.7 0.0 1.6 1 1 0 1 1 1 1 Nup53/35/40-type RNA recognition motif Nup35_RRM_2 PF14605.6 RKO91103.1 - 0.0013 18.7 0.0 0.0022 18.0 0.0 1.4 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif RRM_1 PF00076.22 RKO91103.1 - 0.02 14.7 0.0 0.036 13.9 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Spt20 PF12090.8 RKO91103.1 - 0.029 14.0 8.8 0.04 13.5 8.8 1.2 1 0 0 1 1 1 0 Spt20 family TFIIA PF03153.13 RKO91103.1 - 0.049 13.6 6.9 0.086 12.8 6.9 1.3 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DUF908 PF06012.12 RKO91103.1 - 1.4 8.3 7.2 2.5 7.5 7.2 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF908) SARAF PF06682.12 RKO91103.1 - 6.5 6.3 9.8 10 5.7 9.8 1.4 1 0 0 1 1 1 0 SOCE-associated regulatory factor of calcium homoeostasis DUF2076 PF09849.9 RKO91103.1 - 7.6 6.5 20.0 4.6 7.2 17.9 1.7 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) PDCD2_C PF04194.13 RKO91104.1 - 7.5e-40 136.8 0.2 5.9e-38 130.7 0.0 2.2 2 0 0 2 2 2 2 Programmed cell death protein 2, C-terminal putative domain Snf7 PF03357.21 RKO91105.1 - 7.1e-07 29.0 1.6 7.7e-07 28.9 1.6 1.0 1 0 0 1 1 1 1 Snf7 YlqD PF11068.8 RKO91105.1 - 0.012 16.0 1.1 0.013 15.9 1.1 1.1 1 0 0 1 1 1 0 YlqD protein DUF2229 PF09989.9 RKO91105.1 - 0.047 13.3 0.2 0.048 13.3 0.2 1.1 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) Acetyltransf_11 PF13720.6 RKO91105.1 - 0.099 13.1 0.5 0.12 12.8 0.5 1.1 1 0 0 1 1 1 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 4F5 PF04419.14 RKO91105.1 - 2 9.3 7.1 1.3 9.9 5.4 1.6 2 0 0 2 2 2 0 4F5 protein family tRNA_U5-meth_tr PF05958.11 RKO91106.1 - 1e-13 51.0 0.0 9e-13 47.9 0.0 2.2 1 1 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_25 PF13649.6 RKO91106.1 - 0.00059 20.5 0.0 0.0021 18.7 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_15 PF09445.10 RKO91106.1 - 0.0017 17.9 0.0 0.0046 16.6 0.0 1.6 2 0 0 2 2 2 1 RNA cap guanine-N2 methyltransferase Methyltransf_11 PF08241.12 RKO91106.1 - 0.0019 18.8 0.0 0.0064 17.1 0.0 2.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO91106.1 - 0.022 14.6 0.0 0.043 13.6 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 RKO91106.1 - 0.023 14.1 0.0 0.043 13.2 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) N6_N4_Mtase PF01555.18 RKO91106.1 - 0.025 14.3 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 DNA methylase Methyltransf_23 PF13489.6 RKO91106.1 - 0.026 14.3 0.0 0.049 13.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain TPMT PF05724.11 RKO91106.1 - 0.12 12.0 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Actin PF00022.19 RKO91107.1 - 2.6e-22 79.0 0.1 4.4e-09 35.4 0.0 3.3 3 1 0 3 3 3 3 Actin Actin_micro PF17003.5 RKO91107.1 - 8.1e-08 31.8 0.0 0.004 16.4 0.0 2.5 2 1 0 2 2 2 2 Putative actin-like family MreB_Mbl PF06723.13 RKO91107.1 - 2.2e-05 23.5 0.2 0.015 14.2 0.2 2.1 2 0 0 2 2 2 2 MreB/Mbl protein FtsA PF14450.6 RKO91107.1 - 0.2 12.1 0.0 0.4 11.1 0.0 1.5 1 0 0 1 1 1 0 Cell division protein FtsA MatE PF01554.18 RKO91107.1 - 0.22 11.2 1.3 0.34 10.5 1.3 1.2 1 0 0 1 1 1 0 MatE ADK PF00406.22 RKO91109.1 - 1.4e-258 846.5 19.9 2.2e-43 148.0 0.0 9.2 8 1 0 8 8 8 8 Adenylate kinase AAA_17 PF13207.6 RKO91109.1 - 1.5e-176 579.1 21.9 1.7e-28 99.8 0.1 9.0 8 1 0 8 8 8 8 AAA domain AAA_18 PF13238.6 RKO91109.1 - 1.5e-38 132.3 8.0 2.7e-05 24.7 0.0 7.6 7 1 0 7 7 6 6 AAA domain AAA_33 PF13671.6 RKO91109.1 - 8.5e-24 84.3 2.0 0.0024 18.0 0.0 7.9 6 2 0 6 6 6 6 AAA domain Cytidylate_kin PF02224.18 RKO91109.1 - 2e-12 47.3 1.9 0.37 10.5 0.0 6.4 6 0 0 6 6 6 3 Cytidylate kinase GvpK PF05121.12 RKO91109.1 - 3.9e-10 39.6 0.9 6.5 6.9 0.0 8.1 7 0 0 7 7 7 2 Gas vesicle protein K Hydin_ADK PF17213.3 RKO91109.1 - 2.2e-06 28.1 0.0 0.31 11.3 0.0 5.0 5 0 0 5 5 5 1 Hydin Adenylate kinase-like domain Rhabdo_ncap_2 PF03216.13 RKO91109.1 - 0.00041 19.9 0.0 31 3.9 0.0 5.5 7 0 0 7 7 7 0 Rhabdovirus nucleoprotein DUF2570 PF10828.8 RKO91109.1 - 0.00045 20.0 0.3 12 5.8 0.0 5.2 6 0 0 6 6 6 0 Protein of unknown function (DUF2570) Thymidylate_kin PF02223.17 RKO91109.1 - 0.00071 19.3 27.6 4.1 7.0 0.1 10.3 12 0 0 12 12 12 2 Thymidylate kinase AAA_28 PF13521.6 RKO91109.1 - 0.0097 16.2 0.2 10 6.3 0.0 3.4 3 0 0 3 3 3 1 AAA domain Ploopntkinase3 PF18751.1 RKO91109.1 - 0.014 15.3 0.3 2.3 8.1 0.0 3.1 3 0 0 3 3 3 0 P-loop Nucleotide Kinase3 F-box-like_2 PF13013.6 RKO91109.1 - 0.026 14.5 0.0 7.4 6.6 0.0 4.0 4 0 0 4 4 4 0 F-box-like domain AAA_19 PF13245.6 RKO91109.1 - 0.032 14.6 0.5 2.7 8.3 0.0 2.9 3 0 0 3 3 3 0 AAA domain SRP54 PF00448.22 RKO91109.1 - 0.052 13.2 2.3 8.7 5.9 0.1 4.2 5 0 0 5 5 5 0 SRP54-type protein, GTPase domain ORF45 PF17620.2 RKO91109.1 - 0.058 13.5 9.0 43 4.1 0.0 6.3 7 0 0 7 7 7 0 Family of unknown function Ank_5 PF13857.6 RKO91110.1 - 6e-09 36.0 0.8 2.8 8.4 0.0 5.6 5 1 1 6 6 6 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO91110.1 - 7.1e-08 32.9 0.2 0.052 14.2 0.0 5.8 3 2 4 7 7 7 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO91110.1 - 8.5e-05 23.0 0.9 1.4 9.6 0.0 5.7 6 1 0 6 6 6 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO91110.1 - 0.00071 19.8 1.8 1.4e+02 3.6 0.0 6.8 8 0 0 8 8 8 0 Ankyrin repeat DUF3693 PF12472.8 RKO91110.1 - 0.19 11.4 0.8 0.49 10.1 0.8 1.7 1 0 0 1 1 1 0 Phage related protein p450 PF00067.22 RKO91111.1 - 3.8e-56 190.8 0.0 4.3e-56 190.6 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 DUF3120 PF11318.8 RKO91111.1 - 0.12 12.7 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3120) Pkinase PF00069.25 RKO91114.1 - 0.0056 16.1 0.0 0.0085 15.5 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91114.1 - 0.04 13.2 0.0 0.063 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein tyrosine kinase STE PF02200.16 RKO91116.1 - 2.5e-45 153.4 0.2 2.8e-45 153.2 0.2 1.0 1 0 0 1 1 1 1 STE like transcription factor zf-C2H2 PF00096.26 RKO91117.1 - 1.1e-06 28.7 11.3 0.0037 17.6 0.1 2.3 2 1 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO91117.1 - 0.0039 17.9 12.5 0.19 12.7 0.2 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger FOXP-CC PF16159.5 RKO91117.1 - 0.024 15.2 3.5 0.2 12.3 0.7 2.0 2 0 0 2 2 2 0 FOXP coiled-coil domain zf-H2C2_2 PF13465.6 RKO91117.1 - 0.37 11.3 0.3 0.37 11.3 0.3 3.0 3 0 0 3 3 3 0 Zinc-finger double domain zf_C2H2_ZHX PF18387.1 RKO91117.1 - 5 6.8 8.4 5 6.9 3.1 2.1 1 1 1 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain MULE PF10551.9 RKO91119.1 - 0.012 16.0 0.0 0.026 14.9 0.0 1.5 1 0 0 1 1 1 0 MULE transposase domain MULE PF10551.9 RKO91120.1 - 4.3e-05 23.8 0.0 7.9e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 MULE transposase domain Abhydrolase_6 PF12697.7 RKO91122.1 - 2.3e-10 41.5 3.6 3.5e-10 40.9 3.6 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 RKO91122.1 - 2.3e-08 34.5 0.4 3.2e-08 34.0 0.4 1.2 1 0 0 1 1 1 1 Thioesterase domain Hydrolase_4 PF12146.8 RKO91122.1 - 1e-05 24.9 0.4 1.6e-05 24.3 0.4 1.4 1 0 0 1 1 1 1 Serine aminopeptidase, S33 PGAP1 PF07819.13 RKO91122.1 - 1.3e-05 25.1 0.1 0.0002 21.2 0.1 2.1 1 1 0 1 1 1 1 PGAP1-like protein DUF2974 PF11187.8 RKO91122.1 - 0.00019 21.0 0.2 0.00028 20.5 0.2 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Ser_hydrolase PF06821.13 RKO91122.1 - 0.0016 18.3 0.0 0.0023 17.8 0.0 1.3 1 0 0 1 1 1 1 Serine hydrolase DUF900 PF05990.12 RKO91122.1 - 0.0017 17.9 0.6 0.0026 17.3 0.0 1.6 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF900) LCAT PF02450.15 RKO91122.1 - 0.0064 15.7 0.0 0.0087 15.3 0.0 1.2 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase Abhydrolase_1 PF00561.20 RKO91122.1 - 0.0066 16.1 1.5 0.063 12.9 1.5 2.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold UPF0227 PF05728.12 RKO91122.1 - 0.0069 16.3 0.2 0.015 15.3 0.1 1.5 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0227) DUF676 PF05057.14 RKO91122.1 - 0.0089 15.6 0.0 0.11 12.0 0.0 2.0 1 1 0 1 1 1 1 Putative serine esterase (DUF676) Questin_oxidase PF14027.6 RKO91122.1 - 0.016 14.8 0.4 0.018 14.6 0.4 1.2 1 1 0 1 1 1 0 Questin oxidase-like DUF915 PF06028.11 RKO91122.1 - 0.049 12.9 0.0 2.8 7.2 0.0 2.1 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) DHO_dh PF01180.21 RKO91125.1 - 7.3e-38 130.4 0.1 8.2e-38 130.3 0.1 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase NMO PF03060.15 RKO91125.1 - 0.02 14.3 0.5 0.029 13.8 0.5 1.3 1 0 0 1 1 1 0 Nitronate monooxygenase FMN_dh PF01070.18 RKO91125.1 - 4 6.4 5.4 10 5.0 5.4 1.6 1 1 0 1 1 1 0 FMN-dependent dehydrogenase HSP70 PF00012.20 RKO91126.1 - 1.1e-07 30.5 0.0 1.7e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Hsp70 protein Spectrin PF00435.21 RKO91126.1 - 0.037 14.5 0.9 39 4.8 0.1 3.3 3 0 0 3 3 3 0 Spectrin repeat DUF5616 PF18481.1 RKO91126.1 - 0.11 12.9 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5616) FBPase_glpX PF03320.13 RKO91126.1 - 0.16 10.8 0.0 0.29 9.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DnaJ-X PF14308.6 RKO91127.1 - 1.9e-42 145.1 0.0 1.4e-40 139.0 0.0 2.2 2 0 0 2 2 2 2 X-domain of DnaJ-containing DnaJ PF00226.31 RKO91127.1 - 4.2e-27 94.1 1.2 8.5e-27 93.1 1.2 1.6 1 0 0 1 1 1 1 DnaJ domain SPATA9 PF15824.5 RKO91127.1 - 0.024 13.9 0.2 0.041 13.2 0.2 1.3 1 0 0 1 1 1 0 Spermatogenesis-associated protein 9 DUF3456 PF11938.8 RKO91127.1 - 0.029 14.9 0.4 0.052 14.1 0.4 1.3 1 0 0 1 1 1 0 TLR4 regulator and MIR-interacting MSAP NCKAP5 PF15246.6 RKO91127.1 - 0.043 13.4 1.7 0.09 12.4 1.7 1.5 1 0 0 1 1 1 0 Nck-associated protein 5, Peripheral clock protein Sel1 PF08238.12 RKO91129.1 - 2.2e-08 34.5 0.0 2.4e-08 34.4 0.0 1.1 1 0 0 1 1 1 1 Sel1 repeat Rhomboid PF01694.22 RKO91130.1 - 3.8e-14 52.9 5.1 3.8e-14 52.9 5.1 1.5 2 0 0 2 2 2 1 Rhomboid family Mononeg_RNA_pol PF00946.19 RKO91130.1 - 0.015 12.9 0.0 0.015 12.9 0.0 1.0 1 0 0 1 1 1 0 Mononegavirales RNA dependent RNA polymerase DUF1751 PF08551.10 RKO91130.1 - 0.016 15.8 0.7 0.016 15.8 0.7 1.5 2 0 0 2 2 2 0 Eukaryotic integral membrane protein (DUF1751) Plasmod_Pvs28 PF06247.11 RKO91131.1 - 1.2e-06 28.7 8.8 0.73 10.2 0.1 4.4 4 0 0 4 4 4 3 Pvs28 EGF domain EGF_3 PF12947.7 RKO91131.1 - 2.4e-05 24.4 23.5 0.42 10.9 0.8 4.3 4 0 0 4 4 4 4 EGF domain TIL PF01826.17 RKO91131.1 - 6.7e-05 23.1 18.3 0.37 11.1 0.9 4.2 1 1 3 4 4 4 4 Trypsin Inhibitor like cysteine rich domain cEGF PF12662.7 RKO91131.1 - 0.00013 21.8 26.2 0.28 11.1 1.1 5.0 5 1 0 5 5 5 3 Complement Clr-like EGF-like EB PF01683.18 RKO91131.1 - 0.0002 21.6 20.2 0.15 12.4 2.3 4.3 1 1 3 4 4 4 4 EB module EGF_2 PF07974.13 RKO91131.1 - 0.0013 19.0 29.8 0.41 11.1 2.4 4.8 4 1 0 4 4 4 3 EGF-like domain RANK_CRD_2 PF18278.1 RKO91131.1 - 0.51 10.5 16.5 18 5.6 0.1 4.2 4 0 0 4 4 4 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 Candida_ALS PF05792.13 RKO91131.1 - 1.4 9.5 12.2 14 6.4 0.2 3.1 3 0 0 3 3 3 0 Candida agglutinin-like (ALS) Scs3p PF10261.9 RKO91131.1 - 2.4 7.6 12.4 8.9 5.7 1.2 3.0 1 1 2 3 3 3 0 Inositol phospholipid synthesis and fat-storage-inducing TM EGF_MSP1_1 PF12946.7 RKO91131.1 - 3.1 7.9 26.0 4.7 7.3 1.0 5.4 4 3 0 4 4 4 0 MSP1 EGF domain 1 hEGF PF12661.7 RKO91131.1 - 3.8 8.3 25.5 7.3 7.4 0.1 6.0 6 1 0 6 6 6 0 Human growth factor-like EGF DUF2461 PF09365.10 RKO91132.1 - 7.1e-63 212.3 0.0 9.6e-63 211.9 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical protein (DUF2461) CxC7 PF18866.1 RKO91132.1 - 0.019 15.1 0.0 0.061 13.5 0.1 1.8 2 0 0 2 2 2 0 CxC7 like cysteine cluster associated with KDZ transposases zf-RanBP PF00641.18 RKO91133.1 - 2.6e-06 26.6 8.8 5.2e-06 25.7 8.8 1.5 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others Sporozoite_P67 PF05642.11 RKO91133.1 - 7.9 4.4 7.2 11 3.9 7.2 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Q_salvage PF10343.9 RKO91137.1 - 1e-33 117.2 0.0 5.1e-33 114.9 0.0 1.9 1 1 0 1 1 1 1 Potential Queuosine, Q, salvage protein family Thioredoxin PF00085.20 RKO91138.1 - 3.6e-28 97.6 0.0 3.7e-28 97.5 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 RKO91138.1 - 1.7e-06 28.3 0.0 2.6e-06 27.6 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.6 RKO91138.1 - 2.9e-06 27.7 0.1 1.7e-05 25.2 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain OST3_OST6 PF04756.13 RKO91138.1 - 7.6e-06 25.5 0.0 8.9e-06 25.3 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family AhpC-TSA PF00578.21 RKO91138.1 - 1.4e-05 25.0 0.0 1.9e-05 24.6 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_7 PF13899.6 RKO91138.1 - 1.6e-05 25.0 0.1 2.8e-05 24.2 0.1 1.4 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_9 PF14595.6 RKO91138.1 - 2.6e-05 24.0 0.0 2.6e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Redoxin PF08534.10 RKO91138.1 - 9.7e-05 22.1 0.2 0.00017 21.3 0.2 1.5 1 1 0 1 1 1 1 Redoxin Glutaredoxin PF00462.24 RKO91138.1 - 0.0031 17.7 0.0 0.0054 16.9 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin DSBA PF01323.20 RKO91138.1 - 0.032 14.0 0.2 4.8 6.9 0.0 2.0 1 1 1 2 2 2 0 DSBA-like thioredoxin domain HyaE PF07449.11 RKO91138.1 - 0.06 13.3 0.0 0.081 12.9 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Cys_Met_Meta_PP PF01053.20 RKO91139.1 - 2.5e-67 227.1 0.0 1.8e-66 224.2 0.0 2.3 1 1 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Ribosomal_S8e PF01201.22 RKO91140.1 - 6.9e-52 175.2 4.6 6.9e-52 175.2 4.6 1.7 1 1 0 1 1 1 1 Ribosomal protein S8e WD40 PF00400.32 RKO91141.1 - 4.9e-14 52.5 8.0 0.002 18.9 0.0 7.5 7 1 0 7 7 7 3 WD domain, G-beta repeat Bromodomain PF00439.25 RKO91141.1 - 3.2e-11 43.1 0.0 6.1e-11 42.2 0.0 1.4 1 0 0 1 1 1 1 Bromodomain ANAPC4_WD40 PF12894.7 RKO91141.1 - 2.5e-08 34.1 0.0 0.85 10.0 0.0 5.2 3 2 2 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain YL1 PF05764.13 RKO91141.1 - 0.0011 19.1 14.9 0.0011 19.1 14.9 2.6 2 0 0 2 2 2 1 YL1 nuclear protein Nup160 PF11715.8 RKO91141.1 - 0.0069 15.1 0.0 0.0069 15.1 0.0 2.4 3 0 0 3 3 3 1 Nucleoporin Nup120/160 Auxin_resp PF06507.13 RKO91141.1 - 0.033 14.5 0.5 0.24 11.7 0.0 2.4 3 0 0 3 3 3 0 Auxin response factor Ge1_WD40 PF16529.5 RKO91141.1 - 0.23 10.4 0.1 15 4.4 0.0 2.9 3 0 0 3 3 3 0 WD40 region of Ge1, enhancer of mRNA-decapping protein F-actin_cap_A PF01267.17 RKO91143.1 - 1.6e-94 316.2 0.0 1.8e-94 316.1 0.0 1.0 1 0 0 1 1 1 1 F-actin capping protein alpha subunit HATPase_c_3 PF13589.6 RKO91144.1 - 2.3e-10 40.5 0.1 2.7e-10 40.2 0.1 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 RKO91144.1 - 9.8e-07 29.3 0.0 1.1e-06 29.1 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RHS_repeat PF05593.14 RKO91145.1 - 0.011 16.2 1.5 0.025 15.1 1.5 1.6 1 0 0 1 1 1 0 RHS Repeat YTH PF04146.15 RKO91146.1 - 4.5e-13 49.5 0.2 4.5e-13 49.5 0.2 4.5 2 2 0 2 2 2 1 YT521-B-like domain Na_H_Exchanger PF00999.21 RKO91147.1 - 6.7e-57 193.0 43.2 1e-56 192.4 43.2 1.2 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family zf-RING_11 PF17123.5 RKO91149.1 - 1e-05 25.2 0.3 1.9e-05 24.3 0.3 1.5 1 0 0 1 1 1 1 RING-like zinc finger IQ PF00612.27 RKO91149.1 - 0.00086 18.9 0.8 0.0021 17.7 0.8 1.7 1 0 0 1 1 1 1 IQ calmodulin-binding motif zf-RING_2 PF13639.6 RKO91149.1 - 0.0086 16.4 0.1 0.017 15.5 0.1 1.4 1 0 0 1 1 1 1 Ring finger domain B_lectin PF01453.24 RKO91152.1 - 0.00024 21.6 0.5 0.0065 17.0 0.0 2.5 1 1 1 2 2 2 1 D-mannose binding lectin Cation_ATPase_C PF00689.21 RKO91154.1 - 0.011 15.4 0.0 0.011 15.4 0.0 1.0 1 0 0 1 1 1 0 Cation transporting ATPase, C-terminus UTP25 PF06862.12 RKO91155.1 - 9e-163 542.4 4.7 1e-162 542.2 4.7 1.0 1 0 0 1 1 1 1 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 SET PF00856.28 RKO91156.1 - 1.9e-10 41.4 0.0 3.6e-10 40.5 0.0 1.4 1 0 0 1 1 1 1 SET domain AWS PF17907.1 RKO91156.1 - 0.0065 16.5 2.7 0.011 15.7 2.7 1.4 1 0 0 1 1 1 1 AWS domain Pre-SET PF05033.16 RKO91156.1 - 0.0071 17.0 4.7 0.011 16.3 4.7 1.4 1 0 0 1 1 1 1 Pre-SET motif WW PF00397.26 RKO91157.1 - 0.0014 18.6 0.4 1.6 8.9 0.0 3.3 2 1 1 3 3 3 2 WW domain CNH PF00780.22 RKO91160.1 - 0.0058 16.3 0.0 0.0086 15.7 0.0 1.2 1 0 0 1 1 1 1 CNH domain Kelch_4 PF13418.6 RKO91162.1 - 2.9e-07 30.4 0.4 3.5e-06 26.9 0.1 2.8 2 0 0 2 2 2 1 Galactose oxidase, central domain zf-primase PF09329.11 RKO91162.1 - 5e-07 29.4 1.0 1e-06 28.4 1.0 1.6 1 0 0 1 1 1 1 Primase zinc finger Kelch_5 PF13854.6 RKO91162.1 - 5.4e-06 26.3 0.3 1.5e-05 24.9 0.0 2.0 2 0 0 2 2 2 1 Kelch motif Kelch_3 PF13415.6 RKO91162.1 - 9.4e-06 25.8 2.4 0.17 12.2 0.1 3.9 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO91162.1 - 0.026 14.1 0.1 0.21 11.2 0.0 2.7 3 0 0 3 3 3 0 Kelch motif zf-MYND PF01753.18 RKO91164.1 - 2.9e-09 36.8 9.9 2.9e-09 36.8 9.9 1.8 2 0 0 2 2 2 1 MYND finger zf-C6H2 PF15801.5 RKO91164.1 - 0.49 10.7 5.3 1.2 9.5 5.3 1.6 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding Sel1 PF08238.12 RKO91165.1 - 2e-06 28.3 1.4 0.059 14.1 0.1 3.2 3 0 0 3 3 3 2 Sel1 repeat FMN_dh PF01070.18 RKO91167.1 - 7.3e-120 400.1 0.7 8.9e-120 399.9 0.7 1.1 1 0 0 1 1 1 1 FMN-dependent dehydrogenase Cyt-b5 PF00173.28 RKO91167.1 - 1.8e-21 76.0 0.0 5.6e-21 74.5 0.0 1.8 2 0 0 2 2 2 1 Cytochrome b5-like Heme/Steroid binding domain Glu_synthase PF01645.17 RKO91167.1 - 1.2e-07 31.2 0.2 1.8e-07 30.7 0.2 1.2 1 0 0 1 1 1 1 Conserved region in glutamate synthase IMPDH PF00478.25 RKO91167.1 - 0.00013 21.1 0.1 0.00033 19.8 0.1 1.6 1 1 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 RKO91167.1 - 0.023 14.1 1.0 0.027 13.9 0.3 1.5 2 0 0 2 2 2 0 Nitronate monooxygenase zf-C2H2 PF00096.26 RKO91168.1 - 6.9e-07 29.4 1.2 0.043 14.3 0.1 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 RKO91168.1 - 2.9e-06 27.4 0.9 0.0011 19.2 0.4 2.4 2 1 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-C2H2_4 PF13894.6 RKO91168.1 - 3.8e-06 27.3 1.3 0.072 14.0 0.1 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-Di19 PF05605.12 RKO91168.1 - 0.003 17.8 1.2 0.038 14.3 1.1 2.0 1 1 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_6 PF13912.6 RKO91168.1 - 0.0054 16.7 0.5 0.53 10.3 0.0 2.3 1 1 1 2 2 2 1 C2H2-type zinc finger LIM PF00412.22 RKO91168.1 - 0.0059 16.8 0.7 0.014 15.6 0.7 1.6 1 1 0 1 1 1 1 LIM domain Ima1_N PF09779.9 RKO91168.1 - 0.016 16.1 0.7 0.019 15.8 0.7 1.1 1 0 0 1 1 1 0 Ima1 N-terminal domain zf-met PF12874.7 RKO91168.1 - 0.017 15.5 0.4 5.2 7.6 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger of C2H2 type DUF629 PF04780.12 RKO91168.1 - 0.026 13.1 1.7 0.042 12.4 1.7 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF629) HypA PF01155.19 RKO91168.1 - 0.031 14.3 0.4 0.034 14.1 0.4 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_12 PF11331.8 RKO91168.1 - 0.045 13.6 1.9 0.068 13.0 1.5 1.6 1 1 0 1 1 1 0 Probable zinc-ribbon domain PyrI_C PF02748.15 RKO91168.1 - 0.14 12.1 3.5 0.28 11.1 0.4 2.1 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-C2HC_2 PF13913.6 RKO91168.1 - 0.86 9.6 0.1 0.86 9.6 0.1 2.8 3 0 0 3 3 3 0 zinc-finger of a C2HC-type FMN_dh PF01070.18 RKO91170.1 - 7.3e-120 400.1 0.7 8.9e-120 399.9 0.7 1.1 1 0 0 1 1 1 1 FMN-dependent dehydrogenase Cyt-b5 PF00173.28 RKO91170.1 - 1.8e-21 76.0 0.0 5.6e-21 74.5 0.0 1.8 2 0 0 2 2 2 1 Cytochrome b5-like Heme/Steroid binding domain Glu_synthase PF01645.17 RKO91170.1 - 1.2e-07 31.2 0.2 1.8e-07 30.7 0.2 1.2 1 0 0 1 1 1 1 Conserved region in glutamate synthase IMPDH PF00478.25 RKO91170.1 - 0.00013 21.1 0.1 0.00033 19.8 0.1 1.6 1 1 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 RKO91170.1 - 0.023 14.1 1.0 0.027 13.9 0.3 1.5 2 0 0 2 2 2 0 Nitronate monooxygenase Arf PF00025.21 RKO91172.1 - 3.1e-42 144.0 0.0 1.5e-39 135.3 0.0 2.0 1 1 0 1 1 1 1 ADP-ribosylation factor family SRPRB PF09439.10 RKO91172.1 - 0.00033 20.1 0.0 0.28 10.6 0.0 2.1 2 0 0 2 2 2 2 Signal recognition particle receptor beta subunit G-alpha PF00503.20 RKO91172.1 - 0.13 11.4 0.1 1.8 7.6 0.0 2.0 2 0 0 2 2 2 0 G-protein alpha subunit Arf PF00025.21 RKO91173.1 - 5e-76 254.0 0.1 5.9e-76 253.8 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 RKO91173.1 - 7.2e-14 52.0 0.0 9.8e-14 51.6 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 RKO91173.1 - 4.2e-13 49.2 1.5 2e-09 37.1 0.8 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Ras PF00071.22 RKO91173.1 - 2.2e-12 46.9 0.0 2.4e-12 46.7 0.0 1.1 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 RKO91173.1 - 8.4e-12 44.9 0.0 1e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 RKO91173.1 - 4.6e-10 39.3 0.0 5.9e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 RKO91173.1 - 1.9e-05 24.7 0.0 2.8e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 RKO91173.1 - 0.026 13.8 0.1 0.049 12.9 0.1 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase cobW PF02492.19 RKO91173.1 - 0.15 11.7 0.1 1.2 8.7 0.0 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ATP-synt_C PF00137.21 RKO91175.1 - 1.4e-12 47.7 11.1 1.9e-12 47.4 11.1 1.1 1 0 0 1 1 1 1 ATP synthase subunit C DUF3687 PF12459.8 RKO91175.1 - 0.072 12.6 0.3 0.11 12.0 0.3 1.4 1 0 0 1 1 1 0 D-Ala-teichoic acid biosynthesis protein F-box-like PF12937.7 RKO91178.1 - 1.8e-05 24.6 3.4 0.0032 17.3 1.7 3.2 2 1 0 2 2 2 2 F-box-like LRR_6 PF13516.6 RKO91178.1 - 0.024 14.7 0.1 4.8 7.5 0.0 3.3 3 0 0 3 3 3 0 Leucine Rich repeat LRR_4 PF12799.7 RKO91178.1 - 0.081 13.4 0.3 3.7 8.1 0.0 3.6 4 1 1 5 5 5 0 Leucine Rich repeats (2 copies) Retrotran_gag_2 PF14223.6 RKO91179.1 - 0.0003 20.5 0.0 0.0012 18.6 0.0 1.8 1 1 0 1 1 1 1 gag-polypeptide of LTR copia-type gag_pre-integrs PF13976.6 RKO91179.1 - 0.00047 20.0 0.1 0.0013 18.6 0.1 1.7 1 0 0 1 1 1 1 GAG-pre-integrase domain Lipase_GDSL_2 PF13472.6 RKO91182.1 - 2.9e-10 40.9 0.1 3.6e-10 40.5 0.1 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family SWIRM-assoc_2 PF16496.5 RKO91183.1 - 0.13 11.1 0.4 0.15 10.9 0.4 1.1 1 0 0 1 1 1 0 SWIRM-associated domain at the N-terminal Fib_alpha PF08702.10 RKO91185.1 - 0.026 14.7 0.7 3.6 7.8 0.0 2.5 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family FTA4 PF13093.6 RKO91185.1 - 0.056 13.3 1.3 0.16 11.9 1.3 1.7 1 1 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 BST2 PF16716.5 RKO91185.1 - 0.085 13.4 3.1 1.4 9.6 3.0 2.8 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 BLOC1_2 PF10046.9 RKO91185.1 - 0.35 11.2 2.9 1.9 8.8 0.2 2.7 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 ADIP PF11559.8 RKO91185.1 - 0.52 10.4 6.7 0.16 12.1 3.0 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding TSC22 PF01166.18 RKO91185.1 - 1 9.7 5.6 50 4.3 0.1 3.4 2 1 1 3 3 3 0 TSC-22/dip/bun family Rootletin PF15035.6 RKO91185.1 - 1.5 8.8 9.0 2 8.4 6.4 2.2 2 0 0 2 2 2 0 Ciliary rootlet component, centrosome cohesion Cnn_1N PF07989.11 RKO91185.1 - 2 8.6 5.7 39 4.5 0.0 3.6 2 1 1 3 3 3 0 Centrosomin N-terminal motif 1 TolA_bind_tri PF16331.5 RKO91185.1 - 7.2 6.8 14.0 3.9 7.6 3.5 3.1 3 1 0 3 3 3 0 TolA binding protein trimerisation CHMI PF02962.15 RKO91189.1 - 0.18 12.2 0.0 0.33 11.3 0.0 1.4 1 0 0 1 1 1 0 5-carboxymethyl-2-hydroxymuconate isomerase WGG PF10273.9 RKO91191.1 - 5.5e-11 43.0 0.0 7.5e-11 42.6 0.0 1.2 1 0 0 1 1 1 1 Pre-rRNA-processing protein TSR2 adh_short_C2 PF13561.6 RKO91192.1 - 1.3e-09 38.0 0.0 1.6e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO91192.1 - 6.1e-08 32.3 0.0 7.6e-08 32.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase UCR_TM PF02921.14 RKO91192.1 - 0.14 12.6 1.8 2.3 8.7 0.3 2.5 3 0 0 3 3 3 0 Ubiquinol cytochrome reductase transmembrane region MutS_III PF05192.18 RKO91193.1 - 6.1e-32 111.4 1.1 1.3e-31 110.3 0.4 1.8 2 0 0 2 2 2 1 MutS domain III MutS_IV PF05190.18 RKO91193.1 - 2.4e-16 59.8 0.7 4.4e-16 59.0 0.1 1.8 2 0 0 2 2 2 1 MutS family domain IV MutS_II PF05188.17 RKO91193.1 - 1e-14 55.0 0.2 3.4e-14 53.3 0.1 2.0 2 0 0 2 2 2 1 MutS domain II MutS_I PF01624.20 RKO91193.1 - 1.6e-13 50.9 0.0 5.6e-13 49.1 0.0 2.0 2 0 0 2 2 2 1 MutS domain I Tup_N PF08581.10 RKO91193.1 - 2.9 8.2 4.7 1.3 9.4 0.1 2.6 3 0 0 3 3 3 0 Tup N-terminal CS PF04969.16 RKO91194.1 - 1.6e-18 67.5 0.5 3.2e-18 66.5 0.1 1.7 2 0 0 2 2 2 1 CS domain Pkinase PF00069.25 RKO91196.1 - 8.5e-38 130.2 0.5 1e-37 130.0 0.5 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91196.1 - 3.7e-25 88.7 0.4 4.4e-25 88.4 0.4 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO91196.1 - 9.1e-06 25.2 0.1 0.00016 21.1 0.1 1.9 1 1 1 2 2 2 1 Kinase-like APH PF01636.23 RKO91196.1 - 0.00047 20.2 0.0 0.03 14.2 0.1 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family DSHCT PF08148.12 RKO91196.1 - 0.00074 19.2 0.0 0.00097 18.8 0.0 1.2 1 0 0 1 1 1 1 DSHCT (NUC185) domain Kdo PF06293.14 RKO91196.1 - 0.005 16.2 0.3 0.15 11.4 0.0 2.0 1 1 1 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 RKO91196.1 - 0.0053 15.6 0.0 0.0084 14.9 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 RKO91196.1 - 0.11 12.1 0.0 0.29 10.7 0.0 1.6 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 DEAD PF00270.29 RKO91197.1 - 1.3e-49 168.3 0.0 6.4e-48 162.8 0.0 2.1 2 0 0 2 2 2 2 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO91197.1 - 9.1e-24 83.9 0.2 2.7e-22 79.2 0.3 2.7 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO91197.1 - 7e-06 26.2 0.0 3e-05 24.1 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Kin17_mid PF10357.9 RKO91199.1 - 4.8e-53 178.4 1.1 5.7e-53 178.1 1.1 1.1 1 0 0 1 1 1 1 Domain of Kin17 curved DNA-binding protein Methyltransf_7 PF03492.15 RKO91199.1 - 0.0028 16.9 1.3 0.021 14.0 0.1 2.0 2 0 0 2 2 2 1 SAM dependent carboxyl methyltransferase VESA1_N PF12785.7 RKO91199.1 - 0.0061 15.6 1.9 0.0078 15.2 1.9 1.2 1 0 0 1 1 1 1 Variant erythrocyte surface antigen-1 zf-met PF12874.7 RKO91199.1 - 0.0067 16.8 8.2 0.017 15.5 8.2 1.7 1 0 0 1 1 1 1 Zinc-finger of C2H2 type DUF2470 PF10615.9 RKO91199.1 - 0.0084 16.7 0.0 0.019 15.6 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2470) zf-C2H2_jaz PF12171.8 RKO91199.1 - 0.023 15.0 7.9 0.023 15.0 7.9 2.0 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2_2 PF12756.7 RKO91199.1 - 0.36 11.2 8.9 0.25 11.7 5.5 2.1 2 0 0 2 2 2 0 C2H2 type zinc-finger (2 copies) Transketolase_N PF00456.21 RKO91200.1 - 3.4e-150 499.6 0.1 4.5e-150 499.2 0.1 1.1 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain Transket_pyr PF02779.24 RKO91200.1 - 1.4e-41 142.1 0.0 2.4e-41 141.4 0.0 1.4 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 RKO91200.1 - 2.6e-11 43.4 0.0 7e-11 42.1 0.0 1.8 1 0 0 1 1 1 1 Transketolase, C-terminal domain DXP_synthase_N PF13292.6 RKO91200.1 - 4.7e-06 26.0 0.0 8.6e-06 25.1 0.0 1.4 1 0 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase Dynamin_N PF00350.23 RKO91201.1 - 8.5e-15 55.2 0.1 2.2e-10 40.8 0.0 2.4 1 1 0 2 2 2 2 Dynamin family Dynamin_M PF01031.20 RKO91201.1 - 4.8e-11 42.4 0.0 1.2e-09 37.8 0.0 2.4 2 1 1 3 3 3 1 Dynamin central region MMR_HSR1 PF01926.23 RKO91201.1 - 0.0064 16.6 0.0 0.014 15.5 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_16 PF13191.6 RKO91201.1 - 0.098 13.0 0.9 0.68 10.3 0.0 2.6 2 1 0 2 2 2 0 AAA ATPase domain Dynamin_M PF01031.20 RKO91202.1 - 3.4e-07 29.8 0.0 7.2e-07 28.7 0.0 1.5 1 1 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 RKO91202.1 - 5.2e-06 26.6 0.0 8.2e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Dynamin family GED PF02212.18 RKO91203.1 - 1.5e-05 25.1 0.3 0.00051 20.1 0.0 2.8 3 1 0 3 3 3 1 Dynamin GTPase effector domain DUF3631 PF12307.8 RKO91203.1 - 0.038 14.2 0.0 0.06 13.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3631) WD40 PF00400.32 RKO91204.1 - 7.4e-11 42.4 0.4 0.27 12.2 0.0 6.2 7 0 0 7 7 7 3 WD domain, G-beta repeat Lactonase PF10282.9 RKO91204.1 - 2.1e-07 30.5 0.0 4.4e-07 29.5 0.0 1.4 1 1 0 1 1 1 1 Lactonase, 7-bladed beta-propeller ANAPC4_WD40 PF12894.7 RKO91204.1 - 0.0005 20.3 0.0 13 6.1 0.0 3.5 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain SGL PF08450.12 RKO91204.1 - 0.011 15.3 0.1 12 5.3 0.0 3.0 1 1 1 3 3 3 0 SMP-30/Gluconolactonase/LRE-like region Cytochrom_D1 PF02239.16 RKO91204.1 - 0.02 13.4 0.0 0.045 12.3 0.0 1.6 1 1 1 2 2 2 0 Cytochrome D1 heme domain PTPRCAP PF15713.5 RKO91204.1 - 0.037 14.3 0.1 0.066 13.5 0.1 1.3 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated eIF2A PF08662.11 RKO91204.1 - 0.05 13.5 0.0 0.38 10.6 0.0 2.2 2 0 0 2 2 2 0 Eukaryotic translation initiation factor eIF2A RAB3GAP2_N PF14655.6 RKO91204.1 - 0.17 11.1 0.0 6.9 5.8 0.0 2.2 2 0 0 2 2 2 0 Rab3 GTPase-activating protein regulatory subunit N-terminus zf-U1 PF06220.12 RKO91205.1 - 0.0055 16.5 0.0 0.01 15.6 0.0 1.5 1 0 0 1 1 1 1 U1 zinc finger WD40 PF00400.32 RKO91206.1 - 1.3e-25 89.2 7.9 2e-07 31.6 0.1 4.1 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO91206.1 - 0.0024 18.1 0.0 1.3 9.3 0.0 3.0 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain VID27 PF08553.10 RKO91206.1 - 0.041 12.9 0.0 0.041 12.9 0.0 1.2 1 0 0 1 1 1 0 VID27 C-terminal WD40-like domain DUF370 PF04025.12 RKO91206.1 - 0.093 12.9 0.1 0.18 12.0 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF370) Gln-synt_C-ter PF18318.1 RKO91207.1 - 3.7e-06 26.8 0.0 5.4e-06 26.3 0.0 1.2 1 0 0 1 1 1 1 Glutamine synthetase C-terminal domain Inhibitor_I9 PF05922.16 RKO91209.1 - 0.0087 16.7 0.1 0.75 10.5 0.0 2.2 2 0 0 2 2 2 2 Peptidase inhibitor I9 RRM_1 PF00076.22 RKO91210.1 - 1.9e-30 104.5 0.0 4e-14 52.2 0.0 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ATP-grasp_2 PF08442.10 RKO91210.1 - 0.11 12.1 0.0 0.61 9.6 0.0 1.9 2 0 0 2 2 2 0 ATP-grasp domain Tim54 PF11711.8 RKO91213.1 - 1.7e-35 122.5 0.0 7.1e-26 90.9 0.0 2.3 1 1 1 2 2 2 2 Inner membrane protein import complex subunit Tim54 Presenilin PF01080.17 RKO91214.1 - 2.7 6.7 14.3 6.3 5.5 14.3 1.6 1 0 0 1 1 1 0 Presenilin GREB1 PF15782.5 RKO91214.1 - 3.1 4.8 21.9 5.6 3.9 21.9 1.3 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer DUF1681 PF07933.14 RKO91215.1 - 0.1 12.3 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) AraC_binding_2 PF14525.6 RKO91215.1 - 0.21 11.2 0.0 0.4 10.3 0.0 1.4 1 0 0 1 1 1 0 AraC-binding-like domain PPR_2 PF13041.6 RKO91218.1 - 8.1e-11 42.0 0.1 3.4e-06 27.1 0.0 5.4 6 0 0 6 6 6 2 PPR repeat family PPR_3 PF13812.6 RKO91218.1 - 7.6e-08 32.3 0.0 5.3e-05 23.2 0.0 4.6 5 0 0 5 5 5 1 Pentatricopeptide repeat domain PPR PF01535.20 RKO91218.1 - 0.015 15.5 0.6 1.1 9.6 0.0 4.3 6 0 0 6 6 6 0 PPR repeat Pkinase PF00069.25 RKO91219.1 - 1.7e-23 83.4 1.3 2e-23 83.1 1.3 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91219.1 - 3.6e-13 49.4 0.7 4.2e-13 49.2 0.7 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase DUF3677 PF12432.8 RKO91219.1 - 0.056 13.8 0.3 0.17 12.2 0.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3677) Phage_T7_Capsid PF05396.11 RKO91219.1 - 0.15 12.4 0.0 0.21 11.9 0.0 1.2 1 0 0 1 1 1 0 Phage T7 capsid assembly protein Myb_DNA-binding PF00249.31 RKO91220.1 - 5.2e-15 55.4 0.0 8e-08 32.4 0.0 2.6 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO91220.1 - 2.4e-05 24.5 0.0 0.11 12.8 0.0 2.5 2 0 0 2 2 2 2 Myb-like DNA-binding domain Tup_N PF08581.10 RKO91221.1 - 0.29 11.5 0.1 0.29 11.5 0.1 3.6 4 1 0 4 4 4 0 Tup N-terminal KxDL PF10241.9 RKO91221.1 - 0.37 11.1 17.5 0.056 13.7 1.6 3.9 3 1 1 4 4 4 0 Uncharacterized conserved protein CALCOCO1 PF07888.11 RKO91221.1 - 0.39 9.5 39.0 0.17 10.7 34.1 2.3 2 1 0 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like BLOC1_2 PF10046.9 RKO91221.1 - 0.71 10.2 23.6 0.055 13.8 2.2 4.1 3 1 0 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DHR10 PF18595.1 RKO91221.1 - 1.4 9.0 46.3 0.7 10.0 6.1 4.9 3 1 1 4 4 4 0 Designed helical repeat protein 10 domain Filament PF00038.21 RKO91221.1 - 3.2 7.3 37.1 0.18 11.4 20.0 3.5 2 1 2 4 4 4 0 Intermediate filament protein DUF3584 PF12128.8 RKO91221.1 - 9 3.6 32.9 16 2.8 32.8 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3584) HEAT PF02985.22 RKO91223.1 - 1.6e-08 34.0 17.4 0.069 13.4 0.0 9.8 12 0 0 12 12 12 3 HEAT repeat HEAT_2 PF13646.6 RKO91223.1 - 2.5e-08 34.2 21.9 0.073 13.5 0.2 7.5 5 3 2 7 7 7 4 HEAT repeats HEAT_EZ PF13513.6 RKO91223.1 - 2.9e-07 30.8 23.2 0.088 13.3 0.1 9.0 6 2 4 10 10 10 2 HEAT-like repeat CLASP_N PF12348.8 RKO91223.1 - 3.8e-05 23.4 0.0 0.052 13.1 0.0 3.5 3 0 0 3 3 3 1 CLASP N terminal Vac14_Fab1_bd PF12755.7 RKO91223.1 - 7.8e-05 23.2 0.0 5.8 7.6 0.0 5.6 5 1 1 6 6 6 1 Vacuolar 14 Fab1-binding region Tti2 PF10521.9 RKO91223.1 - 0.0015 18.1 0.2 0.55 9.7 0.0 3.3 3 1 0 3 3 3 1 Tti2 family Cnd1 PF12717.7 RKO91223.1 - 0.1 12.6 0.0 8.8 6.3 0.0 3.6 4 0 0 4 4 4 0 non-SMC mitotic condensation complex subunit 1 CRAL_TRIO PF00650.20 RKO91224.1 - 5.6e-20 71.7 0.0 7.7e-20 71.2 0.0 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 RKO91224.1 - 0.018 15.2 0.0 0.021 14.9 0.0 1.1 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain TPR_11 PF13414.6 RKO91226.1 - 4.8e-19 67.7 10.9 0.00028 20.5 0.1 6.8 6 1 1 7 7 7 5 TPR repeat TPR_2 PF07719.17 RKO91226.1 - 4.3e-17 60.8 13.2 0.0019 18.2 0.0 8.0 8 0 0 8 8 8 4 Tetratricopeptide repeat TPR_1 PF00515.28 RKO91226.1 - 1.1e-16 59.8 19.8 0.0018 18.0 2.1 8.3 8 1 0 8 8 8 4 Tetratricopeptide repeat TPR_9 PF13371.6 RKO91226.1 - 3.4e-11 43.1 3.4 0.0025 17.9 0.1 5.9 3 2 0 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 RKO91226.1 - 1.1e-10 40.9 5.4 0.34 11.2 1.5 5.8 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.6 RKO91226.1 - 1.4e-10 41.7 2.9 0.0003 21.4 0.0 5.5 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_17 PF13431.6 RKO91226.1 - 1.7e-07 31.1 8.5 0.25 11.8 0.2 6.2 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_12 PF13424.6 RKO91226.1 - 1.1e-05 25.7 8.3 1.6 9.1 0.0 4.8 3 2 1 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.6 RKO91226.1 - 2.9e-05 24.5 5.3 0.089 13.3 0.0 5.3 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_14 PF13428.6 RKO91226.1 - 0.0002 21.9 2.8 65 4.7 0.1 5.9 3 2 1 5 5 5 0 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO91226.1 - 0.00042 20.5 7.2 0.34 11.2 0.1 3.4 3 0 0 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 RKO91226.1 - 0.0021 18.6 15.2 3 8.7 1.3 6.8 8 0 0 8 8 7 2 Tetratricopeptide repeat NARP1 PF12569.8 RKO91226.1 - 0.0035 16.3 0.7 0.019 13.9 0.2 2.1 2 0 0 2 2 2 1 NMDA receptor-regulated protein 1 SHNi-TPR PF10516.9 RKO91226.1 - 0.078 12.5 0.1 1.1 8.8 0.0 2.5 2 0 0 2 2 2 0 SHNi-TPR TPR_7 PF13176.6 RKO91226.1 - 0.16 12.1 6.4 48 4.3 0.1 5.3 6 0 0 6 6 6 0 Tetratricopeptide repeat S1-P1_nuclease PF02265.16 RKO91227.1 - 1.5e-63 215.0 0.0 1.7e-63 214.8 0.0 1.0 1 0 0 1 1 1 1 S1/P1 Nuclease LRR_adjacent PF08191.11 RKO91227.1 - 0.022 15.0 0.7 30 4.9 0.0 3.4 3 0 0 3 3 3 0 LRR adjacent zf-CCCH PF00642.24 RKO91228.1 - 9.5e-08 31.8 18.1 0.0014 18.5 2.4 4.3 3 1 1 4 4 4 4 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 RKO91228.1 - 5.9e-07 29.3 20.2 0.11 12.6 0.9 5.5 5 1 0 5 5 5 4 Zinc finger domain zf-CCCH_3 PF15663.5 RKO91228.1 - 0.001 19.2 12.5 0.01 16.1 2.7 3.3 1 1 1 2 2 2 1 Zinc-finger containing family Torus PF16131.5 RKO91228.1 - 0.0073 17.0 15.5 0.15 12.7 0.5 3.7 1 1 3 4 4 4 2 Torus domain zf-C3H1 PF10650.9 RKO91228.1 - 0.032 14.0 1.6 0.35 10.6 0.2 4.8 4 1 0 4 4 4 0 Putative zinc-finger domain zf-CCCH_4 PF18044.1 RKO91228.1 - 0.08 12.8 27.2 0.34 10.8 0.0 5.8 7 0 0 7 7 7 0 CCCH-type zinc finger zf-CCCH_2 PF14608.6 RKO91228.1 - 0.11 13.0 25.9 0.89 10.1 2.7 4.2 4 0 0 4 4 4 0 RNA-binding, Nab2-type zinc finger LSM PF01423.22 RKO91230.1 - 2.3e-05 24.0 0.0 3e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 LSM domain SE PF08491.10 RKO91231.1 - 0.068 12.2 0.1 0.091 11.8 0.1 1.1 1 0 0 1 1 1 0 Squalene epoxidase zf-MYND PF01753.18 RKO91233.1 - 2.1e-08 34.1 5.6 2.1e-08 34.1 5.6 2.3 2 0 0 2 2 2 1 MYND finger zf-MYND PF01753.18 RKO91234.1 - 4.9e-10 39.3 13.9 1.1e-09 38.2 13.9 1.7 1 0 0 1 1 1 1 MYND finger BRCA2 PF00634.18 RKO91235.1 - 0.00011 21.8 0.0 1.9 8.2 0.0 4.6 5 0 0 5 5 5 3 BRCA2 repeat Pkinase PF00069.25 RKO91238.1 - 6.7e-70 235.5 0.0 7.5e-70 235.3 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91238.1 - 1.3e-31 109.9 0.0 1.5e-31 109.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO91238.1 - 9.8e-08 31.2 0.0 2.3e-07 30.0 0.0 1.5 2 0 0 2 2 2 1 Fungal protein kinase Kinase-like PF14531.6 RKO91238.1 - 1.4e-07 31.1 0.0 1.9e-06 27.4 0.0 2.3 1 1 0 2 2 2 1 Kinase-like APH PF01636.23 RKO91238.1 - 0.0062 16.5 0.0 0.019 14.9 0.1 1.6 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kdo PF06293.14 RKO91238.1 - 0.009 15.4 0.0 0.013 14.8 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family YrbL-PhoP_reg PF10707.9 RKO91238.1 - 0.02 14.4 0.0 0.033 13.7 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL TetR_C_27 PF17935.1 RKO91238.1 - 0.1 12.6 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Myb_DNA-binding PF00249.31 RKO91239.1 - 3.9e-24 84.6 3.1 0.00033 20.8 0.1 6.8 7 0 0 7 7 7 5 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO91239.1 - 2.1e-10 40.7 0.0 0.76 10.1 0.0 6.3 7 0 0 7 7 7 4 Myb-like DNA-binding domain Myb_DNA-bind_2 PF08914.11 RKO91239.1 - 0.026 14.7 0.0 21 5.4 0.0 3.3 4 0 0 4 4 4 0 Rap1 Myb domain Sigma70_r4_2 PF08281.12 RKO91239.1 - 0.13 12.0 0.0 15 5.4 0.0 3.4 3 0 0 3 3 3 0 Sigma-70, region 4 DctM PF06808.12 RKO91239.1 - 0.55 9.0 2.2 0.31 9.8 0.3 1.5 2 0 0 2 2 2 0 Tripartite ATP-independent periplasmic transporter, DctM component BRCT_2 PF16589.5 RKO91240.1 - 0.019 15.3 0.0 0.083 13.3 0.0 2.0 2 0 0 2 2 2 0 BRCT domain, a BRCA1 C-terminus domain LIG3_BRCT PF16759.5 RKO91240.1 - 0.12 12.6 0.1 0.34 11.2 0.0 1.8 2 0 0 2 2 2 0 DNA ligase 3 BRCT domain Asparaginase_2 PF01112.18 RKO91241.1 - 6.5e-29 100.9 2.7 1.2e-28 100.0 2.7 1.4 1 1 0 1 1 1 1 Asparaginase SIR2 PF02146.17 RKO91242.1 - 9.5e-41 139.6 0.0 1.2e-40 139.3 0.0 1.1 1 0 0 1 1 1 1 Sir2 family SIR2 PF02146.17 RKO91243.1 - 1.6e-34 119.4 0.0 1.2e-32 113.3 0.0 2.7 1 1 0 1 1 1 1 Sir2 family DUF953 PF06110.11 RKO91243.1 - 7e-23 80.5 0.1 1.4e-22 79.5 0.1 1.5 1 1 0 1 1 1 1 Eukaryotic protein of unknown function (DUF953) Furin-like PF00757.20 RKO91243.1 - 0.28 11.0 3.7 6.5 6.6 0.3 2.2 2 0 0 2 2 2 0 Furin-like cysteine rich region Elf1 PF05129.13 RKO91245.1 - 3.1e-28 97.6 1.9 3.5e-28 97.5 1.9 1.0 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Zn-ribbon_8 PF09723.10 RKO91245.1 - 0.028 14.5 0.7 0.36 11.0 1.2 2.0 1 1 1 2 2 2 0 Zinc ribbon domain Ribosomal_L37ae PF01780.19 RKO91245.1 - 0.12 12.4 1.1 0.25 11.4 1.1 1.4 1 1 0 1 1 1 0 Ribosomal L37ae protein family GDP_Man_Dehyd PF16363.5 RKO91246.1 - 2.7e-78 263.7 0.1 4e-70 236.8 0.0 3.3 2 1 1 3 3 3 3 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 RKO91246.1 - 6.1e-75 251.8 0.4 2.7e-58 197.3 0.7 2.2 2 0 0 2 2 2 2 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 RKO91246.1 - 5e-34 117.7 0.0 7.7e-16 58.0 0.0 2.4 3 0 0 3 3 3 2 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 RKO91246.1 - 7.8e-27 94.2 0.2 2.4e-20 72.8 0.1 3.0 2 1 0 2 2 2 2 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 RKO91246.1 - 4.9e-26 91.4 0.2 4.4e-22 78.4 0.4 2.3 2 0 0 2 2 2 2 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 RKO91246.1 - 1.3e-20 73.6 0.1 3.2e-15 56.0 0.1 3.4 3 1 0 3 3 3 3 Male sterility protein NAD_binding_10 PF13460.6 RKO91246.1 - 6.2e-10 39.3 0.1 4.9e-08 33.1 0.0 2.4 2 0 0 2 2 2 1 NAD(P)H-binding adh_short PF00106.25 RKO91246.1 - 0.00012 21.6 0.8 0.61 9.5 0.0 3.6 4 0 0 4 4 4 2 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 RKO91246.1 - 0.0016 18.7 1.0 0.33 11.2 0.0 3.3 3 1 1 4 4 4 1 Saccharopine dehydrogenase NADP binding domain DUF726 PF05277.12 RKO91247.1 - 7.5e-36 123.7 17.1 1.2e-21 77.0 0.0 2.9 2 1 0 2 2 2 2 Protein of unknown function (DUF726) TerB PF05099.13 RKO91247.1 - 0.024 14.6 0.4 0.052 13.5 0.4 1.5 1 0 0 1 1 1 0 Tellurite resistance protein TerB UPF0220 PF05255.11 RKO91247.1 - 0.14 11.7 0.3 2.1 7.9 0.1 2.3 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0220) cNMP_binding PF00027.29 RKO91248.1 - 0.12 12.4 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 Cyclic nucleotide-binding domain ATP-synt_C PF00137.21 RKO91250.1 - 1.6e-08 34.8 1.3 1.9e-08 34.5 1.3 1.1 1 0 0 1 1 1 1 ATP synthase subunit C PetM PF08041.11 RKO91250.1 - 0.011 15.3 3.6 0.046 13.3 0.1 2.4 2 0 0 2 2 2 0 PetM family of cytochrome b6f complex subunit 7 Lipase_3 PF01764.25 RKO91252.1 - 7e-30 103.8 0.0 9.2e-30 103.4 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO91252.1 - 3.4e-07 30.1 0.3 2.1e-06 27.4 0.3 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Abhydrolase_6 PF12697.7 RKO91252.1 - 0.002 18.8 0.0 0.0031 18.2 0.0 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family DUF676 PF05057.14 RKO91252.1 - 0.0026 17.3 0.0 0.0046 16.5 0.0 1.3 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Hydrolase_4 PF12146.8 RKO91252.1 - 0.0027 17.0 0.0 0.0049 16.2 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 PGAP1 PF07819.13 RKO91252.1 - 0.013 15.2 0.1 0.11 12.2 0.0 1.9 1 1 0 2 2 2 0 PGAP1-like protein Cutinase PF01083.22 RKO91252.1 - 0.024 14.6 0.0 0.055 13.4 0.0 1.7 2 0 0 2 2 2 0 Cutinase Abhydrolase_8 PF06259.12 RKO91252.1 - 0.067 12.8 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase ACOX PF01756.19 RKO91254.1 - 7.7e-46 155.9 0.1 1.9e-45 154.7 0.0 1.7 2 0 0 2 2 2 1 Acyl-CoA oxidase Acyl-CoA_dh_M PF02770.19 RKO91254.1 - 6.8e-10 39.0 0.0 1.5e-09 38.0 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 RKO91254.1 - 0.0055 16.9 0.1 0.34 11.1 0.0 2.4 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain CBS PF00571.28 RKO91255.1 - 2.3e-12 47.2 0.0 1.8e-05 25.1 0.0 2.4 2 1 0 2 2 2 2 CBS domain Rotamase_2 PF13145.6 RKO91255.1 - 0.067 14.0 0.0 0.5 11.2 0.0 2.1 2 1 0 2 2 2 0 PPIC-type PPIASE domain Dynamin_M PF01031.20 RKO91257.1 - 4e-67 226.4 0.2 6.8e-67 225.7 0.0 1.5 2 0 0 2 2 2 1 Dynamin central region GED PF02212.18 RKO91257.1 - 7.7e-29 99.7 2.9 1.7e-28 98.6 2.9 1.6 1 0 0 1 1 1 1 Dynamin GTPase effector domain Dynamin_N PF00350.23 RKO91258.1 - 8.4e-39 133.3 0.0 1.2e-38 132.8 0.0 1.2 1 0 0 1 1 1 1 Dynamin family MMR_HSR1 PF01926.23 RKO91258.1 - 0.071 13.2 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF2226 PF09987.9 RKO91258.1 - 0.11 11.8 0.0 0.15 11.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2226) CDO_I PF05995.12 RKO91259.1 - 1.5e-44 151.3 0.2 3.3e-44 150.2 0.2 1.5 1 1 0 1 1 1 1 Cysteine dioxygenase type I PCO_ADO PF07847.12 RKO91259.1 - 4.8e-09 36.0 0.0 6.5e-09 35.5 0.0 1.1 1 0 0 1 1 1 1 PCO_ADO F-box-like PF12937.7 RKO91266.1 - 1.5e-08 34.4 0.3 2.8e-08 33.5 0.3 1.5 1 0 0 1 1 1 1 F-box-like TFIID_20kDa PF03847.13 RKO91267.1 - 2.2e-28 98.5 0.8 2.8e-28 98.2 0.8 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A Histone PF00125.24 RKO91267.1 - 0.00028 21.3 0.1 0.00044 20.6 0.1 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 RKO91267.1 - 0.021 14.9 0.0 0.023 14.8 0.0 1.2 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit LAG1-DNAbind PF09271.11 RKO91268.1 - 8.2e-28 97.9 0.0 1.9e-27 96.8 0.0 1.6 1 0 0 1 1 1 1 LAG1, DNA binding BTD PF09270.10 RKO91268.1 - 5.9e-20 72.0 0.0 1.2e-11 45.1 0.0 3.1 3 0 0 3 3 3 2 Beta-trefoil DNA-binding domain DUF2457 PF10446.9 RKO91268.1 - 0.024 13.8 0.1 0.024 13.8 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2457) TIG PF01833.24 RKO91268.1 - 0.027 14.5 0.0 0.086 12.9 0.0 1.8 1 0 0 1 1 1 0 IPT/TIG domain BTD PF09270.10 RKO91269.1 - 1.5e-20 74.0 0.0 6.4e-12 46.0 0.0 2.7 3 0 0 3 3 3 2 Beta-trefoil DNA-binding domain LAG1-DNAbind PF09271.11 RKO91269.1 - 0.00047 20.8 1.4 0.00047 20.8 1.4 1.6 2 0 0 2 2 2 1 LAG1, DNA binding Myc_N PF01056.18 RKO91269.1 - 0.013 15.4 0.3 0.02 14.8 0.3 1.2 1 0 0 1 1 1 0 Myc amino-terminal region Not3 PF04065.15 RKO91272.1 - 2e-82 276.1 13.6 2.2e-82 275.9 13.6 1.0 1 0 0 1 1 1 1 Not1 N-terminal domain, CCR4-Not complex component Exonuc_VII_S PF02609.16 RKO91272.1 - 0.03 14.4 5.0 4.3 7.5 0.1 3.6 3 0 0 3 3 3 0 Exonuclease VII small subunit DHHA1 PF02272.19 RKO91272.1 - 0.058 13.8 1.0 0.058 13.8 1.0 2.1 2 1 0 2 2 2 0 DHHA1 domain MSL1_dimer PF16801.5 RKO91272.1 - 0.088 12.6 1.0 4.1 7.2 0.2 2.5 2 0 0 2 2 2 0 Dimerisation domain of Male-specific-Lethal 1 ZnuA PF01297.17 RKO91272.1 - 0.12 11.7 2.1 0.19 11.1 0.2 2.0 1 1 1 2 2 2 0 Zinc-uptake complex component A periplasmic Syntaxin-6_N PF09177.11 RKO91272.1 - 0.13 12.8 8.8 4.5 7.9 0.3 2.6 2 0 0 2 2 2 0 Syntaxin 6, N-terminal RNHCP PF12647.7 RKO91273.1 - 0.029 14.3 0.2 0.073 13.1 0.0 1.7 2 0 0 2 2 2 0 RNHCP domain LRR_4 PF12799.7 RKO91273.1 - 0.098 13.1 0.1 2.4 8.7 0.0 2.7 2 0 0 2 2 2 0 Leucine Rich repeats (2 copies) DUF2362 PF10154.9 RKO91274.1 - 2.1e-49 168.8 0.0 1.9e-26 93.1 0.0 2.1 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2362) HOIP-UBA PF16678.5 RKO91274.1 - 0.029 14.4 0.2 0.6 10.1 0.0 2.3 2 0 0 2 2 2 0 HOIP UBA domain pair HTH_20 PF12840.7 RKO91274.1 - 0.094 12.8 0.7 0.26 11.4 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain UBA PF00627.31 RKO91274.1 - 0.097 12.6 2.3 0.14 12.1 0.6 2.2 2 0 0 2 2 2 0 UBA/TS-N domain DUF1640 PF07798.11 RKO91274.1 - 0.22 11.5 2.1 3.2 7.8 0.0 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1640) BK_channel_a PF03493.18 RKO91275.1 - 7.9e-19 67.7 0.0 2.5e-18 66.0 0.0 1.8 1 0 0 1 1 1 1 Calcium-activated BK potassium channel alpha subunit Ion_trans_2 PF07885.16 RKO91275.1 - 1.2e-10 41.2 1.1 1.2e-10 41.2 1.1 2.3 3 0 0 3 3 3 1 Ion channel Ion_trans PF00520.31 RKO91275.1 - 3.7e-05 23.1 13.2 0.0021 17.3 6.1 2.4 1 1 1 2 2 2 2 Ion transport protein Lig_chan PF00060.26 RKO91275.1 - 0.0034 17.2 0.1 0.0092 15.8 0.1 1.7 1 0 0 1 1 1 1 Ligand-gated ion channel TrkA_N PF02254.18 RKO91275.1 - 0.061 13.6 0.0 2 8.7 0.0 2.4 2 0 0 2 2 2 0 TrkA-N domain cNMP_binding PF00027.29 RKO91276.1 - 2.8e-19 69.0 0.1 8.6e-19 67.4 0.0 1.8 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain Thiolase_N PF00108.23 RKO91277.1 - 2.5e-90 302.4 0.6 3.8e-90 301.8 0.6 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 RKO91277.1 - 4.4e-48 162.0 2.1 1e-47 160.8 1.7 1.9 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 RKO91277.1 - 4.3e-06 26.5 1.3 7.3e-05 22.5 0.8 2.8 2 1 1 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain Lant_dehydr_N PF04738.13 RKO91277.1 - 0.059 11.4 0.2 0.081 11.0 0.2 1.1 1 0 0 1 1 1 0 Lantibiotic dehydratase, N terminus ACP_syn_III PF08545.10 RKO91277.1 - 0.15 12.0 3.6 10 6.1 0.0 3.2 3 0 0 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K_oxygenase PF13434.6 RKO91278.1 - 3.1e-18 66.0 0.0 1.2e-12 47.6 0.0 3.0 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) Pyr_redox_2 PF07992.14 RKO91278.1 - 2.6e-07 30.2 0.0 2.2e-05 23.8 0.0 2.9 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 RKO91278.1 - 0.00066 19.7 4.2 2.7 8.0 0.0 4.3 4 1 0 4 4 4 2 FAD-NAD(P)-binding Pyr_redox_3 PF13738.6 RKO91278.1 - 0.0029 16.9 0.1 0.25 10.6 0.0 2.7 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 RKO91278.1 - 0.024 13.9 0.4 3.3 6.9 0.2 2.4 2 0 0 2 2 2 0 FAD binding domain Shikimate_DH PF01488.20 RKO91278.1 - 0.04 14.0 0.0 0.29 11.2 0.0 2.1 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Lycopene_cycl PF05834.12 RKO91278.1 - 0.052 12.6 0.1 0.24 10.4 0.0 2.0 3 0 0 3 3 3 0 Lycopene cyclase protein HI0933_like PF03486.14 RKO91278.1 - 0.11 11.2 0.0 4.1 6.0 0.0 2.1 2 0 0 2 2 2 0 HI0933-like protein Pyr_redox PF00070.27 RKO91278.1 - 0.12 13.0 1.5 13 6.4 0.1 3.0 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Peptidase_S24 PF00717.23 RKO91280.1 - 1.4e-08 34.6 0.0 2.4e-08 33.8 0.0 1.4 1 1 0 1 1 1 1 Peptidase S24-like Peptidase_S26 PF10502.9 RKO91280.1 - 6.4e-08 32.5 0.1 0.00058 19.7 0.0 2.6 1 1 1 2 2 2 2 Signal peptidase, peptidase S26 Ribosom_S12_S23 PF00164.25 RKO91281.1 - 1.2e-36 124.8 1.8 1.3e-36 124.6 1.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S12/S23 ADH_zinc_N PF00107.26 RKO91282.1 - 1.9e-26 92.5 0.6 6.5e-26 90.8 0.1 2.0 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 RKO91282.1 - 4.2e-18 66.7 0.0 9.1e-18 65.6 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 RKO91282.1 - 1.7e-08 34.3 0.0 3.3e-08 33.4 0.0 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain TrkA_N PF02254.18 RKO91282.1 - 0.011 16.0 0.0 0.022 15.0 0.0 1.5 1 0 0 1 1 1 0 TrkA-N domain WD40_4 PF16300.5 RKO91284.1 - 9.3e-06 25.5 0.0 2.1e-05 24.3 0.0 1.7 1 0 0 1 1 1 1 Type of WD40 repeat WD40 PF00400.32 RKO91286.1 - 4.2e-10 40.1 7.2 0.0042 17.9 0.4 4.0 4 0 0 4 4 4 3 WD domain, G-beta repeat FKBP_C PF00254.28 RKO91289.1 - 1.1e-30 105.8 0.0 1.2e-30 105.7 0.0 1.0 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase RabGAP-TBC PF00566.18 RKO91290.1 - 0.0095 15.6 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 Rab-GTPase-TBC domain COX6B PF02297.17 RKO91291.1 - 6.3e-16 58.4 4.9 6.5e-16 58.3 4.9 1.0 1 0 0 1 1 1 1 Cytochrome oxidase c subunit VIb CX9C PF16860.5 RKO91291.1 - 0.018 15.0 2.7 0.028 14.4 2.7 1.3 1 0 0 1 1 1 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, APOBEC_C PF05240.14 RKO91291.1 - 0.046 13.7 0.7 0.08 12.9 0.7 1.4 1 0 0 1 1 1 0 APOBEC-like C-terminal domain F-box-like PF12937.7 RKO91292.1 - 4.2e-05 23.4 1.4 8.4e-05 22.4 1.4 1.5 1 0 0 1 1 1 1 F-box-like DNA_topoisoIV PF00521.20 RKO91293.1 - 8.5e-35 120.5 3.1 8.6e-27 94.1 0.0 3.5 2 1 1 3 3 3 2 DNA gyrase/topoisomerase IV, subunit A TOPRIM_C PF16898.5 RKO91293.1 - 6.2e-17 62.1 3.3 2.6e-15 56.8 3.3 2.8 1 1 0 1 1 1 1 C-terminal associated domain of TOPRIM DNA_gyraseB PF00204.25 RKO91293.1 - 1.8e-11 43.9 0.1 5.7e-11 42.2 0.1 1.8 1 0 0 1 1 1 1 DNA gyrase B MMS1_N PF10433.9 RKO91294.1 - 9e-159 529.2 0.0 2.1e-158 528.0 0.0 1.6 2 0 0 2 2 2 1 Mono-functional DNA-alkylating methyl methanesulfonate N-term CPSF_A PF03178.15 RKO91294.1 - 5.6e-98 328.2 0.0 9.2e-97 324.2 0.0 2.3 2 0 0 2 2 2 1 CPSF A subunit region ANAPC4_WD40 PF12894.7 RKO91294.1 - 0.034 14.4 0.0 0.42 10.9 0.0 2.8 3 0 0 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 RKO91294.1 - 0.12 13.3 0.0 1.3e+02 3.7 0.1 4.0 3 0 0 3 3 3 0 WD domain, G-beta repeat HPS3_N PF14761.6 RKO91294.1 - 0.15 11.6 0.0 0.59 9.6 0.0 2.0 2 0 0 2 2 2 0 Hermansky-Pudlak syndrome 3 Lustrin_cystein PF14625.6 RKO91296.1 - 4.2e-05 23.8 9.0 0.22 11.9 0.4 3.6 3 0 0 3 3 3 2 Lustrin, cysteine-rich repeated domain Dickkopf_N PF04706.12 RKO91296.1 - 0.00034 21.0 0.2 1.7 9.2 0.0 2.8 3 0 0 3 3 3 2 Dickkopf N-terminal cysteine-rich region DSL PF01414.19 RKO91296.1 - 0.28 11.5 1.4 35 4.8 0.0 3.3 3 0 0 3 3 3 0 Delta serrate ligand Inhibitor_I36 PF03995.13 RKO91296.1 - 1.9 8.5 3.6 28 4.7 0.1 2.7 3 0 0 3 3 3 0 Peptidase inhibitor family I36 Lustrin_cystein PF14625.6 RKO91297.1 - 0.049 14.0 0.7 0.049 14.0 0.7 2.2 2 0 0 2 2 2 0 Lustrin, cysteine-rich repeated domain PPP4R2 PF09184.11 RKO91298.1 - 2 7.9 8.7 2.9 7.4 8.7 1.3 1 0 0 1 1 1 0 PPP4R2 BSP_II PF05432.11 RKO91298.1 - 6.2 6.4 20.0 45 3.6 20.0 1.8 1 1 0 1 1 1 0 Bone sialoprotein II (BSP-II) eIF-3c_N PF05470.12 RKO91298.1 - 8.1 4.6 6.7 10 4.3 6.7 1.2 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 8 N-terminus tRNA-synt_2d PF01409.20 RKO91299.1 - 2.9e-51 174.3 1.4 6.1e-28 97.9 0.1 2.1 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) FDX-ACB PF03147.14 RKO91299.1 - 5e-17 62.1 0.0 1.1e-16 61.0 0.0 1.6 1 0 0 1 1 1 1 Ferredoxin-fold anticodon binding domain Pectinesterase PF01095.19 RKO91301.1 - 4.3e-25 88.0 2.4 8.5e-24 83.8 2.4 2.6 1 1 0 1 1 1 1 Pectinesterase GrpE PF01025.19 RKO91302.1 - 1.8e-48 164.4 0.1 2.2e-48 164.1 0.1 1.1 1 0 0 1 1 1 1 GrpE DUF4407 PF14362.6 RKO91302.1 - 0.031 13.6 0.9 0.039 13.3 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Med21 PF11221.8 RKO91302.1 - 0.56 10.5 4.5 1 9.6 4.4 1.4 1 1 0 1 1 1 0 Subunit 21 of Mediator complex tRNA-synt_2d PF01409.20 RKO91303.1 - 2.9e-51 174.3 1.4 6.1e-28 97.9 0.1 2.1 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) FDX-ACB PF03147.14 RKO91303.1 - 5e-17 62.1 0.0 1.1e-16 61.0 0.0 1.6 1 0 0 1 1 1 1 Ferredoxin-fold anticodon binding domain Rootletin PF15035.6 RKO91304.1 - 0.00032 20.8 2.4 0.0004 20.5 2.4 1.1 1 0 0 1 1 1 1 Ciliary rootlet component, centrosome cohesion Baculo_p24 PF05073.12 RKO91304.1 - 0.00043 20.1 3.6 0.00058 19.7 3.6 1.1 1 0 0 1 1 1 1 Baculovirus P24 capsid protein FapA PF03961.13 RKO91304.1 - 0.00051 18.8 5.7 0.00056 18.6 5.7 1.0 1 0 0 1 1 1 1 Flagellar Assembly Protein A Filament PF00038.21 RKO91304.1 - 0.00074 19.2 4.2 0.00074 19.2 4.2 1.5 1 1 1 2 2 2 1 Intermediate filament protein Apolipoprotein PF01442.18 RKO91304.1 - 0.0015 18.4 3.3 0.0019 18.1 3.3 1.2 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain STAT_alpha PF01017.20 RKO91304.1 - 0.002 18.0 3.2 0.0026 17.7 3.2 1.1 1 0 0 1 1 1 1 STAT protein, all-alpha domain BLOC1_2 PF10046.9 RKO91304.1 - 0.0024 18.1 4.5 0.0076 16.5 4.5 1.9 1 1 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 BST2 PF16716.5 RKO91304.1 - 0.0031 18.1 4.1 0.0048 17.5 4.1 1.4 1 0 0 1 1 1 1 Bone marrow stromal antigen 2 Rab5-bind PF09311.11 RKO91304.1 - 0.0035 16.8 4.6 0.0045 16.4 4.6 1.1 1 0 0 1 1 1 1 Rabaptin-like protein DUF4763 PF15960.5 RKO91304.1 - 0.0043 16.4 2.8 0.0058 16.0 2.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4763) DUF3584 PF12128.8 RKO91304.1 - 0.0049 14.5 6.4 0.0053 14.4 6.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) Golgin_A5 PF09787.9 RKO91304.1 - 0.0077 15.7 4.6 0.009 15.5 4.6 1.0 1 0 0 1 1 1 1 Golgin subfamily A member 5 CALCOCO1 PF07888.11 RKO91304.1 - 0.012 14.6 6.5 0.023 13.6 6.3 1.4 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Lebercilin PF15619.6 RKO91304.1 - 0.016 14.9 7.6 0.022 14.4 7.6 1.3 1 0 0 1 1 1 0 Ciliary protein causing Leber congenital amaurosis disease WXG100 PF06013.12 RKO91304.1 - 0.017 15.3 1.8 1.4 9.2 0.0 2.5 1 1 0 2 2 2 0 Proteins of 100 residues with WXG Tektin PF03148.14 RKO91304.1 - 0.018 13.8 9.1 0.66 8.7 3.8 2.1 1 1 1 2 2 2 0 Tektin family CLZ PF16526.5 RKO91304.1 - 0.031 14.6 8.4 1.5 9.2 0.1 2.2 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4140 PF13600.6 RKO91304.1 - 0.036 14.5 7.1 0.38 11.2 1.2 2.5 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) Prominin PF05478.11 RKO91304.1 - 0.043 11.8 4.8 0.05 11.6 4.8 1.0 1 0 0 1 1 1 0 Prominin APG17 PF04108.12 RKO91304.1 - 0.045 12.9 4.8 0.055 12.6 3.7 1.6 1 1 1 2 2 2 0 Autophagy protein Apg17 DUF3450 PF11932.8 RKO91304.1 - 0.058 12.7 3.3 0.073 12.4 3.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Prefoldin PF02996.17 RKO91304.1 - 0.063 13.2 9.7 1 9.3 3.7 2.3 1 1 1 2 2 2 0 Prefoldin subunit Spc7 PF08317.11 RKO91304.1 - 0.07 12.0 9.9 0.16 10.9 9.8 1.5 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF2968 PF11180.8 RKO91304.1 - 0.07 12.7 4.5 0.14 11.7 4.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2968) DUF1664 PF07889.12 RKO91304.1 - 0.083 12.9 5.7 0.17 11.9 2.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DHR10 PF18595.1 RKO91304.1 - 0.098 12.7 8.4 0.44 10.6 4.5 2.2 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain DUF3461 PF11944.8 RKO91304.1 - 0.11 12.7 4.8 0.13 12.4 3.1 1.9 1 1 1 2 2 1 0 Protein of unknown function (DUF3461) GAS PF13851.6 RKO91304.1 - 0.11 11.8 9.8 0.2 11.0 9.8 1.4 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Fmp27_WPPW PF10359.9 RKO91304.1 - 0.12 11.2 6.5 0.14 10.9 6.5 1.0 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain TPR_MLP1_2 PF07926.12 RKO91304.1 - 0.15 12.1 11.3 0.23 11.5 8.3 2.3 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Baculo_PEP_C PF04513.12 RKO91304.1 - 0.19 11.8 3.6 0.32 11.1 3.6 1.4 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus TPD52 PF04201.15 RKO91304.1 - 0.2 11.2 7.7 0.49 10.0 2.4 2.1 1 1 1 2 2 2 0 Tumour protein D52 family MIP-T3_C PF17749.1 RKO91304.1 - 0.22 11.5 10.7 1.9 8.4 0.6 2.1 1 1 1 2 2 2 0 Microtubule-binding protein MIP-T3 C-terminal region Seryl_tRNA_N PF02403.22 RKO91304.1 - 0.24 11.7 13.6 3.3 8.0 7.0 2.7 2 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Atg14 PF10186.9 RKO91304.1 - 0.26 10.4 10.1 1.2 8.2 8.5 1.8 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Med9 PF07544.13 RKO91304.1 - 0.26 11.4 9.0 0.34 11.0 5.7 2.1 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 TMPIT PF07851.13 RKO91304.1 - 0.3 10.3 6.1 0.37 10.0 6.1 1.1 1 0 0 1 1 1 0 TMPIT-like protein HAUS-augmin3 PF14932.6 RKO91304.1 - 0.38 10.3 8.1 1.9 8.0 8.4 1.7 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 3 KxDL PF10241.9 RKO91304.1 - 0.43 10.9 6.1 1.1 9.6 3.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein ATG16 PF08614.11 RKO91304.1 - 0.49 10.6 10.8 3.1 8.0 10.8 2.0 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF4407 PF14362.6 RKO91304.1 - 0.52 9.6 6.2 1.6 8.0 6.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) HAUS6_N PF14661.6 RKO91304.1 - 0.56 9.7 6.7 0.91 9.1 6.7 1.4 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus GrpE PF01025.19 RKO91304.1 - 0.6 9.8 11.9 0.6 9.7 4.6 2.1 1 1 1 2 2 2 0 GrpE Prefoldin_2 PF01920.20 RKO91304.1 - 0.62 10.0 13.0 74 3.4 12.8 2.2 1 1 0 1 1 1 0 Prefoldin subunit Uso1_p115_C PF04871.13 RKO91304.1 - 0.67 10.3 9.8 1.2 9.5 8.9 1.8 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF948 PF06103.11 RKO91304.1 - 0.72 10.1 3.7 0.82 10.0 1.3 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) YabA PF06156.13 RKO91304.1 - 0.99 10.1 6.4 5.2 7.8 6.4 1.9 1 1 0 1 1 1 0 Initiation control protein YabA KELK PF15796.5 RKO91304.1 - 1.1 9.8 10.9 1.4 9.4 5.4 2.2 2 0 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase FlxA PF14282.6 RKO91304.1 - 1.3 9.1 11.3 6.5 6.8 11.0 2.1 1 1 0 1 1 1 0 FlxA-like protein Cep57_MT_bd PF06657.13 RKO91304.1 - 1.4 9.5 8.0 9 6.8 2.1 2.4 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 APG6_N PF17675.1 RKO91304.1 - 2 9.0 12.1 1.7 9.2 5.4 2.0 1 1 0 1 1 1 0 Apg6 coiled-coil region NPV_P10 PF05531.12 RKO91304.1 - 2.3 8.7 8.7 68 4.0 8.7 2.2 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein CENP-H PF05837.12 RKO91304.1 - 3.1 8.2 10.2 2.7 8.5 6.6 2.0 1 1 1 2 2 2 0 Centromere protein H (CENP-H) DASH_Dam1 PF08653.10 RKO91304.1 - 3.4 7.6 5.2 9.2 6.2 0.3 2.5 2 1 0 2 2 2 0 DASH complex subunit Dam1 DUF16 PF01519.16 RKO91304.1 - 3.7 8.1 9.3 49 4.5 9.3 2.0 1 1 0 1 1 1 0 Protein of unknown function DUF16 Swi5 PF07061.11 RKO91304.1 - 4.7 7.4 8.7 7.9 6.6 3.7 2.3 1 1 1 2 2 2 0 Swi5 LMBR1 PF04791.16 RKO91304.1 - 7.6 5.3 5.9 8.7 5.1 5.9 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein XhlA PF10779.9 RKO91304.1 - 7.9 6.8 8.2 4.4 7.6 2.3 2.3 2 0 0 2 2 2 0 Haemolysin XhlA ABC_tran_CTD PF16326.5 RKO91305.1 - 0.00043 20.5 11.5 0.2 11.9 1.0 4.3 3 1 1 4 4 4 2 ABC transporter C-terminal domain DUF1639 PF07797.14 RKO91305.1 - 0.022 14.7 2.0 0.049 13.6 2.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1639) PRKG1_interact PF15898.5 RKO91305.1 - 0.026 15.4 2.8 0.026 15.4 2.8 3.1 2 1 1 3 3 3 0 cGMP-dependent protein kinase interacting domain COG2 PF06148.11 RKO91305.1 - 0.042 13.9 0.1 0.042 13.9 0.1 2.6 4 0 0 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF5339 PF17274.2 RKO91305.1 - 0.09 13.6 3.3 14 6.6 0.4 3.4 2 1 1 3 3 3 0 Family of unknown function (DUF5339) DUF4140 PF13600.6 RKO91305.1 - 0.15 12.5 0.5 0.15 12.5 0.5 3.9 3 1 1 4 4 3 0 N-terminal domain of unknown function (DUF4140) ATG16 PF08614.11 RKO91305.1 - 0.18 12.0 15.6 1.8 8.7 12.6 2.9 2 1 1 3 3 3 0 Autophagy protein 16 (ATG16) DUF4407 PF14362.6 RKO91305.1 - 0.18 11.1 20.7 0.47 9.8 14.7 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4407) HALZ PF02183.18 RKO91305.1 - 0.98 9.7 5.5 5.9 7.2 0.1 3.1 3 0 0 3 3 2 0 Homeobox associated leucine zipper FlxA PF14282.6 RKO91305.1 - 1.1 9.3 6.6 1.1 9.2 0.1 3.0 2 1 1 3 3 3 0 FlxA-like protein Mu-like_Pro PF10123.9 RKO91305.1 - 1.4 8.4 16.1 0.068 12.7 0.5 2.7 2 1 0 2 2 2 0 Mu-like prophage I protein FUSC PF04632.12 RKO91305.1 - 2.1 6.8 4.3 3.6 6.0 4.3 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family Seryl_tRNA_N PF02403.22 RKO91305.1 - 3.7 7.8 22.3 0.62 10.3 1.6 3.5 2 1 2 4 4 4 0 Seryl-tRNA synthetase N-terminal domain Prefoldin PF02996.17 RKO91305.1 - 4 7.4 11.8 1.2 9.0 0.7 4.0 4 1 1 5 5 5 0 Prefoldin subunit YabA PF06156.13 RKO91305.1 - 6.1 7.5 6.8 33 5.2 2.2 3.4 2 1 1 3 3 3 0 Initiation control protein YabA DUF5082 PF16888.5 RKO91305.1 - 9 6.6 13.7 2.8 8.2 0.8 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) DUF3071 PF11268.8 RKO91306.1 - 0.064 13.3 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3071) Ribo_biogen_C PF04034.13 RKO91307.1 - 1.1e-53 180.4 0.0 1.5e-53 179.9 0.0 1.2 1 0 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 RKO91307.1 - 2.7e-15 55.9 0.1 4.3e-15 55.2 0.1 1.3 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI BUD22 PF09073.10 RKO91307.1 - 3.9 6.7 18.2 5 6.4 18.2 1.1 1 0 0 1 1 1 0 BUD22 H2TH PF06831.14 RKO91308.1 - 3.2e-11 43.1 0.0 4.4e-11 42.6 0.0 1.2 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain Molybdop_Fe4S4 PF04879.16 RKO91310.1 - 0.018 15.0 0.5 0.024 14.6 0.5 1.2 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain CFEM PF05730.11 RKO91310.1 - 0.018 15.1 5.2 0.033 14.3 5.2 1.5 1 0 0 1 1 1 0 CFEM domain DUF2345 PF10106.9 RKO91311.1 - 0.011 15.6 0.3 0.088 12.7 0.4 2.5 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2345) Pentapeptide_4 PF13599.6 RKO91311.1 - 0.023 14.9 0.4 0.83 9.9 0.2 3.2 3 0 0 3 3 3 0 Pentapeptide repeats (9 copies) CAF1C_H4-bd PF12265.8 RKO91312.1 - 1.1e-27 96.1 0.2 2.5e-27 94.9 0.2 1.7 1 0 0 1 1 1 1 Histone-binding protein RBBP4 or subunit C of CAF1 complex WD40 PF00400.32 RKO91312.1 - 5.9e-26 90.2 0.2 4.4e-07 30.5 0.0 4.6 4 0 0 4 4 4 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO91312.1 - 2.8e-05 24.3 0.5 0.016 15.5 0.1 3.1 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 RKO91312.1 - 0.002 18.0 0.2 0.0058 16.5 0.2 1.7 1 1 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A WD40 PF00400.32 RKO91313.1 - 8.8e-21 73.8 1.5 4.7e-06 27.2 0.2 6.0 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO91313.1 - 0.00029 21.1 0.0 0.43 10.9 0.0 3.9 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain PQQ_3 PF13570.6 RKO91313.1 - 0.0016 18.9 0.4 11 6.7 0.0 4.0 3 0 0 3 3 3 1 PQQ-like domain Nbas_N PF15492.6 RKO91313.1 - 0.047 13.0 0.0 0.094 12.0 0.0 1.4 1 0 0 1 1 1 0 Neuroblastoma-amplified sequence, N terminal WD40_3 PF15911.5 RKO91313.1 - 0.14 12.2 0.0 3.8 7.6 0.0 2.7 2 0 0 2 2 2 0 WD domain, G-beta repeat HR1 PF02185.16 RKO91314.1 - 5.2e-18 64.9 12.4 3.8e-10 39.7 1.5 2.7 3 0 0 3 3 3 2 Hr1 repeat C2 PF00168.30 RKO91314.1 - 0.00022 21.4 0.0 0.00043 20.5 0.0 1.4 1 0 0 1 1 1 1 C2 domain C1_1 PF00130.22 RKO91314.1 - 0.00045 20.1 1.1 0.0008 19.3 1.1 1.4 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Uds1 PF15456.6 RKO91314.1 - 0.39 10.9 5.3 9.3 6.4 0.6 2.7 2 1 0 2 2 2 0 Up-regulated During Septation Ufm1 PF03671.14 RKO91315.1 - 1.9 8.6 6.4 6 7.0 0.1 4.1 3 0 0 3 3 3 0 Ubiquitin fold modifier 1 protein PseudoU_synth_2 PF00849.22 RKO91316.1 - 2.5e-26 92.7 0.0 3.5e-26 92.2 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase S4 PF01479.25 RKO91316.1 - 0.014 15.1 0.0 0.078 12.7 0.0 2.2 2 0 0 2 2 2 0 S4 domain Ub-Mut7C PF14451.6 RKO91316.1 - 0.021 14.7 0.0 0.041 13.7 0.0 1.5 1 0 0 1 1 1 0 Mut7-C ubiquitin Syja_N PF02383.18 RKO91317.1 - 9.6e-64 215.7 0.0 1.3e-63 215.3 0.0 1.1 1 0 0 1 1 1 1 SacI homology domain HNH_2 PF13391.6 RKO91318.1 - 9.3e-05 22.5 0.0 0.00021 21.4 0.0 1.6 1 0 0 1 1 1 1 HNH endonuclease AAA_2 PF07724.14 RKO91321.1 - 2.6e-42 144.8 0.0 1.2e-39 136.1 0.0 2.6 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 RKO91321.1 - 4.6e-34 116.5 4.2 8.3e-34 115.6 0.3 2.9 2 1 1 3 3 2 1 AAA lid domain AAA PF00004.29 RKO91321.1 - 4.9e-25 88.5 0.0 1.9e-14 54.2 0.0 3.0 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 RKO91321.1 - 9.4e-19 67.8 0.2 1.3e-11 44.7 0.0 3.7 3 1 0 3 3 3 2 AAA domain (dynein-related subfamily) Clp_N PF02861.20 RKO91321.1 - 4.2e-17 62.0 3.0 5.4e-08 32.8 0.8 3.0 3 0 0 3 3 2 2 Clp amino terminal domain, pathogenicity island component AAA_16 PF13191.6 RKO91321.1 - 6.6e-11 42.9 14.4 6.5e-07 29.9 0.1 4.9 5 2 0 5 5 3 2 AAA ATPase domain AAA_22 PF13401.6 RKO91321.1 - 2.1e-08 34.5 0.4 0.014 15.7 0.1 3.9 2 2 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 RKO91321.1 - 8.1e-08 32.2 0.1 0.019 14.7 0.0 2.6 2 0 0 2 2 2 2 IstB-like ATP binding protein Sigma54_activat PF00158.26 RKO91321.1 - 9.5e-08 31.9 0.1 0.00053 19.7 0.0 3.0 2 1 0 2 2 2 2 Sigma-54 interaction domain Roc PF08477.13 RKO91321.1 - 4.3e-07 30.2 0.0 0.039 14.2 0.0 2.6 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 RKO91321.1 - 1.6e-06 27.7 0.1 0.029 13.8 0.0 3.8 3 1 1 4 4 3 2 Bacterial TniB protein AAA_7 PF12775.7 RKO91321.1 - 2.8e-06 26.9 0.0 0.022 14.3 0.0 2.5 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_14 PF13173.6 RKO91321.1 - 3.1e-06 27.2 0.0 0.16 12.0 0.0 3.0 2 0 0 2 2 2 2 AAA domain NACHT PF05729.12 RKO91321.1 - 2.3e-05 24.4 0.0 0.16 11.8 0.0 2.7 2 0 0 2 2 2 2 NACHT domain RNA_helicase PF00910.22 RKO91321.1 - 2.5e-05 24.6 0.0 0.13 12.7 0.0 2.5 2 0 0 2 2 2 2 RNA helicase AAA_24 PF13479.6 RKO91321.1 - 2.5e-05 24.1 0.0 0.031 14.0 0.0 2.7 2 0 0 2 2 2 1 AAA domain RuvB_N PF05496.12 RKO91321.1 - 3.8e-05 23.5 1.7 0.69 9.6 0.0 4.2 3 1 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain ATPase_2 PF01637.18 RKO91321.1 - 5.6e-05 23.2 5.0 3.1 7.7 0.0 4.3 4 1 1 5 5 4 2 ATPase domain predominantly from Archaea AAA_18 PF13238.6 RKO91321.1 - 5.6e-05 23.7 0.0 0.27 11.8 0.0 2.7 2 0 0 2 2 2 2 AAA domain DNA_pol3_delta2 PF13177.6 RKO91321.1 - 6.8e-05 22.7 0.0 0.36 10.6 0.0 2.7 2 0 0 2 2 2 2 DNA polymerase III, delta subunit Mg_chelatase PF01078.21 RKO91321.1 - 0.00013 21.4 0.1 0.41 10.0 0.0 3.4 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI RsgA_GTPase PF03193.16 RKO91321.1 - 0.00021 21.2 0.3 0.42 10.5 0.0 2.7 3 0 0 3 3 2 2 RsgA GTPase ABC_tran PF00005.27 RKO91321.1 - 0.0003 21.3 0.2 0.5 10.9 0.0 3.5 3 0 0 3 3 3 1 ABC transporter TsaE PF02367.17 RKO91321.1 - 0.00032 20.7 0.1 0.69 9.9 0.0 2.7 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 RKO91321.1 - 0.00033 20.8 0.0 0.73 10.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_28 PF13521.6 RKO91321.1 - 0.00036 20.8 1.2 2.4 8.4 0.0 4.1 5 0 0 5 5 3 1 AAA domain DUF87 PF01935.17 RKO91321.1 - 0.00037 20.7 3.2 0.29 11.2 0.0 4.3 4 0 0 4 4 4 1 Helicase HerA, central domain AAA_3 PF07726.11 RKO91321.1 - 0.0005 19.9 0.1 3.5 7.5 0.0 3.8 4 0 0 4 4 3 1 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 RKO91321.1 - 0.0012 18.4 0.7 0.38 10.3 0.0 3.2 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 RKO91321.1 - 0.0016 17.8 0.0 1.3 8.3 0.0 3.2 3 0 0 3 3 3 1 Zeta toxin Rx_N PF18052.1 RKO91321.1 - 0.0032 17.7 4.9 0.29 11.4 0.0 3.4 2 1 1 3 3 3 1 Rx N-terminal domain NTPase_1 PF03266.15 RKO91321.1 - 0.0061 16.5 1.2 0.87 9.5 0.0 3.3 4 0 0 4 4 2 1 NTPase SRP54 PF00448.22 RKO91321.1 - 0.0069 16.0 0.0 2.8 7.5 0.0 2.5 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain NB-ARC PF00931.22 RKO91321.1 - 0.0086 15.3 0.5 1.8 7.7 0.0 3.0 3 0 0 3 3 2 1 NB-ARC domain DUF815 PF05673.13 RKO91321.1 - 0.027 13.6 0.1 0.85 8.7 0.0 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF815) Ras PF00071.22 RKO91321.1 - 0.027 14.1 0.0 9.9 5.7 0.0 2.5 2 0 0 2 2 2 0 Ras family AAA_30 PF13604.6 RKO91321.1 - 0.031 14.0 0.5 1.1 8.9 0.0 3.1 3 1 0 3 3 2 0 AAA domain ResIII PF04851.15 RKO91321.1 - 0.033 14.2 0.0 3.9 7.4 0.0 3.2 2 1 0 3 3 3 0 Type III restriction enzyme, res subunit Bac_DnaA PF00308.18 RKO91321.1 - 0.053 13.3 0.0 12 5.7 0.0 2.5 2 0 0 2 2 2 0 Bacterial dnaA protein MMR_HSR1 PF01926.23 RKO91321.1 - 0.06 13.4 0.0 3.7 7.7 0.0 2.9 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_19 PF13245.6 RKO91321.1 - 0.11 12.8 2.2 1.3 9.4 0.1 3.6 3 2 0 3 3 2 0 AAA domain AAA_23 PF13476.6 RKO91321.1 - 0.12 12.9 12.2 3.2 8.2 0.0 4.2 4 1 0 4 4 3 0 AAA domain PseudoU_synth_2 PF00849.22 RKO91321.1 - 0.14 12.3 0.2 0.5 10.4 0.2 1.9 1 1 0 1 1 1 0 RNA pseudouridylate synthase AAA_29 PF13555.6 RKO91321.1 - 0.17 11.7 0.1 28 4.5 0.0 2.6 2 0 0 2 2 2 0 P-loop containing region of AAA domain ArsA_ATPase PF02374.15 RKO91321.1 - 0.33 10.1 2.0 6.7 5.8 0.0 3.3 3 1 1 4 4 4 0 Anion-transporting ATPase Tup_N PF08581.10 RKO91321.1 - 0.41 11.0 3.6 0.52 10.7 0.9 2.4 2 0 0 2 2 2 0 Tup N-terminal Zn_ribbon_SprT PF17283.2 RKO91325.1 - 0.045 13.7 0.1 0.083 12.8 0.1 1.4 1 0 0 1 1 1 0 SprT-like zinc ribbon domain FixQ PF05545.11 RKO91325.1 - 0.084 12.9 2.1 0.19 11.7 2.1 1.5 1 0 0 1 1 1 0 Cbb3-type cytochrome oxidase component FixQ FHA PF00498.26 RKO91326.1 - 2.9e-05 24.3 0.0 5.7e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 FHA domain 7TMR-DISM_7TM PF07695.11 RKO91329.1 - 0.16 11.9 7.1 0.25 11.2 6.9 1.4 1 1 0 1 1 1 0 7TM diverse intracellular signalling GCFC PF07842.12 RKO91330.1 - 1.4e-07 31.4 0.1 1.5e-06 28.1 0.1 2.0 1 1 0 1 1 1 1 GC-rich sequence DNA-binding factor-like protein MFS_1 PF07690.16 RKO91331.1 - 2.7e-13 49.6 1.6 3.1e-13 49.4 1.6 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO91331.1 - 1.8e-07 30.4 0.1 2e-07 30.3 0.1 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_3 PF05977.13 RKO91331.1 - 0.0028 16.1 0.0 0.0034 15.8 0.0 1.1 1 0 0 1 1 1 1 Transmembrane secretion effector TPR_2 PF07719.17 RKO91332.1 - 1.6e-11 43.4 4.0 0.078 13.1 0.1 8.7 9 0 0 9 9 9 3 Tetratricopeptide repeat Suf PF05843.14 RKO91332.1 - 9.3e-09 35.7 3.1 0.028 14.4 0.2 5.5 3 1 1 5 5 5 2 Suppressor of forked protein (Suf) TPR_14 PF13428.6 RKO91332.1 - 2.5e-07 31.0 28.4 7.9 7.6 0.1 12.3 9 3 5 14 14 14 1 Tetratricopeptide repeat Mad3_BUB1_I PF08311.12 RKO91332.1 - 4.6e-07 29.9 7.5 0.14 12.1 0.1 7.0 8 0 0 8 8 8 2 Mad3/BUB1 homology region 1 TPR_7 PF13176.6 RKO91332.1 - 1.1e-06 28.3 0.0 0.03 14.3 0.0 5.0 6 0 0 6 6 6 2 Tetratricopeptide repeat NRDE-2 PF08424.10 RKO91332.1 - 2.5e-05 23.5 1.7 1.1 8.3 0.0 5.6 4 2 0 5 5 5 2 NRDE-2, necessary for RNA interference TPR_19 PF14559.6 RKO91332.1 - 4.4e-05 23.9 3.7 7.7 7.1 0.1 6.5 9 0 0 9 9 9 1 Tetratricopeptide repeat TPR_8 PF13181.6 RKO91332.1 - 0.0086 16.2 0.3 4.6 7.7 0.0 4.6 6 0 0 6 6 6 1 Tetratricopeptide repeat MIT PF04212.18 RKO91332.1 - 0.016 15.3 0.0 12 6.0 0.0 3.5 3 0 0 3 3 3 0 MIT (microtubule interacting and transport) domain TPR_MalT PF17874.1 RKO91332.1 - 0.028 13.8 0.0 0.3 10.4 0.0 2.7 4 0 0 4 4 4 0 MalT-like TPR region Exo_endo_phos PF03372.23 RKO91333.1 - 3.3e-06 26.8 0.3 4e-06 26.5 0.3 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 RKO91333.1 - 0.0002 21.2 0.0 0.0012 18.7 0.0 2.0 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase Sigma70_r2 PF04542.14 RKO91333.1 - 0.0067 16.2 0.1 0.015 15.1 0.1 1.6 1 0 0 1 1 1 1 Sigma-70 region 2 FmiP_Thoc5 PF09766.9 RKO91334.1 - 3.6e-34 118.6 15.4 4.4e-34 118.4 15.4 1.0 1 0 0 1 1 1 1 Fms-interacting protein/Thoc5 DUF4061 PF13270.6 RKO91334.1 - 0.15 12.4 7.6 1.5 9.2 1.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4061) Atg14 PF10186.9 RKO91334.1 - 1.2 8.1 7.8 2.4 7.1 7.8 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DivIC PF04977.15 RKO91334.1 - 5.6 6.8 12.9 11 5.9 4.7 2.4 2 0 0 2 2 2 0 Septum formation initiator APG6_N PF17675.1 RKO91334.1 - 8.4 6.9 19.3 5.3 7.6 8.3 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region Pkinase PF00069.25 RKO91335.1 - 5e-19 68.7 0.0 3.7e-10 39.6 0.0 2.2 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91335.1 - 2.6e-10 40.0 0.0 4.3e-10 39.3 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Mito_fiss_reg PF05308.11 RKO91335.1 - 0.5 10.4 7.8 1.1 9.3 7.8 1.5 1 0 0 1 1 1 0 Mitochondrial fission regulator Xpo1 PF08389.12 RKO91340.1 - 1.7e-34 119.1 0.1 4.4e-34 117.7 0.1 1.8 1 0 0 1 1 1 1 Exportin 1-like protein IBN_N PF03810.19 RKO91340.1 - 6.2e-05 22.8 0.0 0.00053 19.8 0.0 2.6 3 0 0 3 3 3 1 Importin-beta N-terminal domain KapB PF08810.10 RKO91341.1 - 0.072 13.3 0.0 0.086 13.0 0.0 1.1 1 0 0 1 1 1 0 Kinase associated protein B ABC_tran PF00005.27 RKO91342.1 - 9.9e-26 90.9 1.1 2.7e-20 73.3 0.0 2.9 3 0 0 3 3 3 2 ABC transporter AAA_21 PF13304.6 RKO91342.1 - 8.5e-10 38.9 3.0 0.0012 18.7 0.1 3.4 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran_Xtn PF12848.7 RKO91342.1 - 1.6e-08 34.4 6.3 2.8e-08 33.7 6.3 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 RKO91342.1 - 2.1e-06 27.3 3.5 6.9e-05 22.4 0.0 3.2 3 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 RKO91342.1 - 8.1e-06 25.5 0.2 0.0023 17.6 0.0 2.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_23 PF13476.6 RKO91342.1 - 3.8e-05 24.3 4.9 0.013 16.0 0.0 3.2 3 0 0 3 3 3 1 AAA domain DUF87 PF01935.17 RKO91342.1 - 0.014 15.5 1.2 0.66 10.0 0.0 2.2 2 0 0 2 2 2 0 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 RKO91342.1 - 0.015 14.7 0.1 0.031 13.6 0.0 1.5 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_15 PF13175.6 RKO91342.1 - 0.051 13.3 7.0 0.61 9.7 3.0 3.2 2 1 0 2 2 2 0 AAA ATPase domain DUF883 PF05957.13 RKO91342.1 - 0.09 13.4 2.2 0.21 12.2 2.2 1.5 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) AAA_27 PF13514.6 RKO91342.1 - 0.13 11.8 3.8 0.31 10.6 0.0 2.6 3 0 0 3 3 3 0 AAA domain AAA PF00004.29 RKO91342.1 - 0.2 12.1 0.8 1.8 9.0 0.0 2.7 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) L31 PF09784.9 RKO91342.1 - 0.23 11.9 2.6 0.42 11.1 2.6 1.4 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L31 Fmp27_WPPW PF10359.9 RKO91342.1 - 0.76 8.5 7.2 1.4 7.6 7.2 1.3 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain HMG_box PF00505.19 RKO91343.1 - 4.9e-22 78.1 0.2 6e-22 77.8 0.2 1.1 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 RKO91343.1 - 1.3e-15 57.7 0.1 1.5e-15 57.5 0.1 1.1 1 0 0 1 1 1 1 HMG-box domain CHDNT PF08073.12 RKO91343.1 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 CHDNT (NUC034) domain LicD PF04991.13 RKO91344.1 - 1.9e-17 64.2 0.8 1.8e-11 44.6 0.8 2.1 1 1 1 2 2 2 2 LicD family LRR_6 PF13516.6 RKO91345.1 - 2e-08 33.6 1.8 0.79 9.9 0.0 6.0 6 0 0 6 6 6 3 Leucine Rich repeat LRR_1 PF00560.33 RKO91345.1 - 0.00092 19.4 1.7 23 6.1 0.1 4.8 5 1 0 5 5 5 1 Leucine Rich Repeat LRR_4 PF12799.7 RKO91345.1 - 0.013 15.9 9.3 0.12 12.8 0.1 4.5 4 1 1 5 5 5 0 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO91345.1 - 0.026 14.3 8.1 0.37 10.6 0.1 4.5 2 2 3 5 5 5 0 Leucine rich repeat DNA_pol_phi PF04931.13 RKO91345.1 - 0.29 9.2 3.0 0.42 8.7 3.0 1.1 1 0 0 1 1 1 0 DNA polymerase phi NTF2 PF02136.20 RKO91347.1 - 6.8e-29 100.9 0.0 8.2e-29 100.6 0.0 1.0 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain DBD_Tnp_Mut PF03108.15 RKO91349.1 - 0.00035 20.5 0.1 0.00056 19.9 0.1 1.2 1 0 0 1 1 1 1 MuDR family transposase FA_hydroxylase PF04116.13 RKO91353.1 - 4.5e-20 72.3 29.8 5.1e-20 72.2 27.7 1.9 2 0 0 2 2 2 1 Fatty acid hydroxylase superfamily RRM_1 PF00076.22 RKO91355.1 - 6.3e-17 61.2 0.0 1.6e-07 31.1 0.0 3.3 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Macoilin PF09726.9 RKO91355.1 - 0.062 11.9 1.0 0.069 11.7 1.0 1.1 1 0 0 1 1 1 0 Macoilin family Apt1 PF10351.9 RKO91355.1 - 0.74 8.6 11.0 1.2 7.9 11.0 1.3 1 0 0 1 1 1 0 Golgi-body localisation protein domain RNA_pol_Rpb1_5 PF04998.17 RKO91356.1 - 2.4e-82 276.4 0.2 5e-82 275.3 0.2 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_1 PF04997.12 RKO91356.1 - 2.5e-78 263.6 0.2 5e-78 262.6 0.2 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 RKO91356.1 - 1.5e-70 236.7 0.0 3.4e-70 235.6 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 RKO91356.1 - 1.7e-38 132.1 0.0 5.1e-38 130.5 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 RKO91356.1 - 2.6e-26 91.7 0.0 7.5e-26 90.2 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 SUIM_assoc PF16619.5 RKO91357.1 - 1.9 8.6 4.7 1.9 8.6 0.1 2.5 2 0 0 2 2 2 0 Unstructured region C-term to UIM in Ataxin3 bZIP_1 PF00170.21 RKO91358.1 - 3.3e-05 23.9 2.4 5.1e-05 23.3 2.4 1.2 1 0 0 1 1 1 1 bZIP transcription factor bZIP_1 PF00170.21 RKO91359.1 - 2.3e-06 27.6 7.9 2.3e-06 27.6 7.9 1.8 2 0 0 2 2 2 1 bZIP transcription factor DUF737 PF05300.11 RKO91359.1 - 0.0082 16.5 6.0 0.018 15.4 6.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF737) ERM PF00769.19 RKO91359.1 - 0.14 12.0 10.5 0.21 11.4 10.5 1.2 1 0 0 1 1 1 0 Ezrin/radixin/moesin family bZIP_Maf PF03131.17 RKO91359.1 - 2.5 8.7 8.4 2.8 8.5 5.0 2.2 2 0 0 2 2 2 0 bZIP Maf transcription factor WD40 PF00400.32 RKO91360.1 - 2.2e-33 113.7 20.8 0.00045 21.0 0.0 12.2 12 0 0 12 12 12 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO91360.1 - 1.5e-14 54.0 0.6 0.14 12.5 0.0 6.9 5 3 1 6 6 6 4 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 RKO91360.1 - 4.3e-10 39.4 0.1 6.6e-05 22.4 0.0 3.3 3 1 0 3 3 3 2 WD40-like domain PQQ_3 PF13570.6 RKO91360.1 - 0.00044 20.7 0.7 2.9 8.5 0.0 5.5 4 1 2 6 6 6 1 PQQ-like domain Kelch_2 PF07646.15 RKO91360.1 - 0.097 12.7 1.3 20 5.3 0.1 3.6 3 0 0 3 3 3 0 Kelch motif Rootletin PF15035.6 RKO91361.1 - 0.017 15.1 0.6 0.031 14.3 0.6 1.4 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion FlgN PF05130.12 RKO91361.1 - 0.36 11.3 5.0 0.83 10.2 5.0 1.6 1 1 0 1 1 1 0 FlgN protein Peptidase_A22B PF04258.13 RKO91362.1 - 5.5e-82 275.5 7.0 7e-82 275.1 7.0 1.1 1 0 0 1 1 1 1 Signal peptide peptidase SPP PF06550.11 RKO91362.1 - 0.039 13.4 11.4 0.35 10.3 11.2 2.5 1 1 0 1 1 1 0 Signal-peptide peptidase, presenilin aspartyl protease LigB PF02900.18 RKO91363.1 - 4.6e-42 144.0 0.0 5.1e-42 143.8 0.0 1.0 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase DUF2007 PF09413.10 RKO91363.1 - 0.063 13.5 0.0 0.17 12.1 0.0 1.7 1 0 0 1 1 1 0 Putative prokaryotic signal transducing protein AAA PF00004.29 RKO91364.1 - 1.3e-17 64.4 0.0 3.9e-17 62.9 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) BCS1_N PF08740.11 RKO91364.1 - 3.6e-14 53.2 0.3 5e-14 52.7 0.3 1.2 1 0 0 1 1 1 1 BCS1 N terminal DUF815 PF05673.13 RKO91364.1 - 0.00089 18.5 0.0 0.0054 15.9 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_16 PF13191.6 RKO91364.1 - 0.0019 18.6 0.1 0.0055 17.1 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 RKO91364.1 - 0.02 15.0 0.2 0.043 14.0 0.2 1.8 1 1 0 1 1 1 0 AAA domain RuvB_N PF05496.12 RKO91364.1 - 0.059 13.1 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_7 PF12775.7 RKO91364.1 - 0.061 12.8 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_28 PF13521.6 RKO91364.1 - 0.085 13.1 0.2 0.36 11.1 0.0 2.1 3 0 0 3 3 2 0 AAA domain RNA_helicase PF00910.22 RKO91364.1 - 0.11 12.9 0.0 0.21 12.0 0.0 1.5 1 0 0 1 1 1 0 RNA helicase RsgA_GTPase PF03193.16 RKO91364.1 - 0.11 12.4 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase ATPase PF06745.13 RKO91364.1 - 0.12 11.7 0.0 0.21 10.9 0.0 1.4 1 0 0 1 1 1 0 KaiC AAA_5 PF07728.14 RKO91364.1 - 0.13 12.2 0.0 0.35 10.9 0.0 1.8 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 RKO91364.1 - 0.19 11.4 0.1 0.32 10.7 0.1 1.3 1 0 0 1 1 1 0 AAA domain GST_N PF02798.20 RKO91365.1 - 3.4e-14 52.9 0.0 7e-14 51.9 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C PF00043.25 RKO91365.1 - 3.5e-14 52.8 0.0 5.8e-14 52.1 0.0 1.3 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_N_3 PF13417.6 RKO91365.1 - 2.4e-10 40.6 0.0 4.6e-10 39.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 RKO91365.1 - 1.5e-09 38.0 0.0 2.4e-09 37.4 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_C_2 PF13410.6 RKO91365.1 - 8.8e-09 35.3 1.4 3.6e-08 33.3 0.6 2.2 2 1 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 RKO91365.1 - 1.7e-05 24.9 0.0 3.4e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain MetRS-N PF09635.10 RKO91365.1 - 0.16 12.5 0.0 0.28 11.7 0.0 1.4 1 0 0 1 1 1 0 MetRS-N binding domain Cytochrom_C_asm PF01578.20 RKO91366.1 - 0.0016 18.2 3.3 0.0024 17.7 3.3 1.1 1 0 0 1 1 1 1 Cytochrome C assembly protein Spc7 PF08317.11 RKO91367.1 - 0.0011 17.9 38.4 0.013 14.4 5.6 4.9 3 1 1 4 4 4 4 Spc7 kinetochore protein HIP1_clath_bdg PF16515.5 RKO91367.1 - 0.0051 17.4 42.9 0.2 12.3 0.4 7.7 5 2 1 7 7 7 3 Clathrin-binding domain of Huntingtin-interacting protein 1 ATG16 PF08614.11 RKO91367.1 - 0.51 10.5 0.0 0.2 11.8 9.9 9.5 7 2 1 9 9 9 0 Autophagy protein 16 (ATG16) RNA_pol_Rpb8 PF03870.15 RKO91368.1 - 6.2e-52 175.5 0.1 7.3e-52 175.3 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb8 RNA_pol_RpbG PF16992.5 RKO91368.1 - 0.043 13.9 0.1 2.9 7.9 0.0 2.1 2 0 0 2 2 2 0 DNA-directed RNA polymerase, subunit G GATA PF00320.27 RKO91369.1 - 1.4e-09 37.4 3.5 2.8e-09 36.4 3.5 1.5 1 0 0 1 1 1 1 GATA zinc finger Tudor_3 PF18115.1 RKO91369.1 - 4.5e-06 26.4 0.0 9e-06 25.4 0.0 1.5 1 0 0 1 1 1 1 DNA repair protein Crb2 Tudor domain Tudor_2 PF18104.1 RKO91369.1 - 0.0019 17.8 0.1 0.0036 16.9 0.1 1.4 1 0 0 1 1 1 1 Jumonji domain-containing protein 2A Tudor domain DUF4537 PF15057.6 RKO91369.1 - 0.025 14.6 0.0 0.052 13.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4537) Agenet PF05641.12 RKO91369.1 - 0.047 14.2 0.6 0.25 11.8 0.0 2.5 3 0 0 3 3 3 0 Agenet domain MULE PF10551.9 RKO91374.1 - 0.0019 18.6 0.0 0.0026 18.2 0.0 1.2 1 0 0 1 1 1 1 MULE transposase domain GCIP PF13324.6 RKO91375.1 - 1.1e-06 28.4 0.7 0.0021 17.7 0.1 2.1 1 1 1 2 2 2 2 Grap2 and cyclin-D-interacting TEBP_beta PF07404.11 RKO91376.1 - 0.0049 16.3 2.2 0.0049 16.3 2.2 2.0 2 0 0 2 2 2 1 Telomere-binding protein beta subunit (TEBP beta) DUF3391 PF11871.8 RKO91376.1 - 0.21 12.1 0.3 0.21 12.1 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3391) HECT PF00632.25 RKO91381.1 - 3.2e-29 102.4 0.0 3.5e-29 102.3 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) NOC3p PF07540.11 RKO91382.1 - 1e-33 115.6 0.3 1.5e-33 115.1 0.3 1.2 1 0 0 1 1 1 1 Nucleolar complex-associated protein WD40 PF00400.32 RKO91383.1 - 1e-10 42.0 6.1 0.0052 17.6 0.0 6.4 6 0 0 6 6 6 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO91383.1 - 9.8e-06 25.8 0.2 0.8 10.0 0.0 4.4 3 1 3 6 6 6 2 Anaphase-promoting complex subunit 4 WD40 domain PKI PF02827.16 RKO91388.1 - 0.4 10.9 3.9 0.71 10.1 1.1 2.3 1 1 1 2 2 2 0 cAMP-dependent protein kinase inhibitor WD40 PF00400.32 RKO91389.1 - 5.6e-06 27.0 8.1 0.081 13.8 0.1 6.2 6 0 0 6 6 6 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO91389.1 - 4.9e-05 23.5 0.5 5.8 7.3 0.0 4.3 3 2 0 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 RKO91389.1 - 0.027 13.8 0.1 0.074 12.4 0.0 1.8 2 1 0 2 2 2 0 WD40-like domain Nup160 PF11715.8 RKO91389.1 - 0.19 10.3 2.9 1 8.0 0.2 2.3 1 1 0 2 2 2 0 Nucleoporin Nup120/160 Na_sulph_symp PF00939.19 RKO91390.1 - 1.3e-87 294.9 29.5 1.6e-87 294.6 29.5 1.0 1 0 0 1 1 1 1 Sodium:sulfate symporter transmembrane region Myosin_head PF00063.21 RKO91391.1 - 1.9e-147 492.4 0.4 2.1e-147 492.2 0.4 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) Myosin_N PF02736.19 RKO91391.1 - 5.3e-12 45.4 3.6 7.6e-12 44.9 3.0 1.6 2 0 0 2 2 2 1 Myosin N-terminal SH3-like domain PAF-AH_p_II PF03403.13 RKO91392.1 - 2.3e-49 167.9 0.0 7.7e-49 166.2 0.0 1.7 2 0 0 2 2 2 1 Platelet-activating factor acetylhydrolase, isoform II Chlorophyllase2 PF12740.7 RKO91392.1 - 5e-06 25.6 0.0 0.014 14.3 0.0 2.1 2 0 0 2 2 2 2 Chlorophyllase enzyme Hydrolase_4 PF12146.8 RKO91392.1 - 0.00012 21.4 0.1 0.093 12.0 0.1 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 RKO91392.1 - 0.00089 18.8 0.0 0.0025 17.3 0.0 1.6 2 0 0 2 2 2 1 Prolyl oligopeptidase family Chlorophyllase PF07224.11 RKO91392.1 - 0.11 11.5 0.0 0.32 10.0 0.0 1.6 2 0 0 2 2 2 0 Chlorophyllase Abhydrolase_2 PF02230.16 RKO91392.1 - 0.19 11.5 0.0 18 5.0 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase DUF3712 PF12505.8 RKO91393.1 - 1.7e-30 105.9 15.4 8.4e-19 68.1 0.2 4.1 4 0 0 4 4 4 3 Protein of unknown function (DUF3712) LEA_2 PF03168.13 RKO91393.1 - 0.23 12.0 6.9 3.5 8.2 0.1 4.6 4 1 0 4 4 4 0 Late embryogenesis abundant protein TPR_11 PF13414.6 RKO91394.1 - 8.2e-06 25.4 0.1 1.2e-05 24.9 0.1 1.2 1 0 0 1 1 1 1 TPR repeat TPR_16 PF13432.6 RKO91394.1 - 2.9e-05 24.6 1.5 3.2e-05 24.5 1.5 1.1 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 RKO91394.1 - 0.00059 19.6 0.6 0.057 13.3 0.1 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 RKO91394.1 - 0.0011 18.9 0.7 0.072 13.2 0.1 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 RKO91394.1 - 0.0018 18.5 0.9 0.0023 18.2 0.9 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO91394.1 - 0.003 17.7 0.3 0.0035 17.5 0.3 1.0 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 Alkyl_sulf_dimr PF14863.6 RKO91394.1 - 0.0041 17.6 0.1 0.0045 17.4 0.1 1.0 1 0 0 1 1 1 1 Alkyl sulfatase dimerisation TPR_17 PF13431.6 RKO91394.1 - 0.0057 17.0 0.1 0.02 15.2 0.1 1.9 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 RKO91394.1 - 0.0091 16.1 0.6 2.3 8.7 0.1 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 RKO91394.1 - 0.016 15.7 0.5 0.021 15.4 0.5 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_7 PF13176.6 RKO91394.1 - 0.039 14.0 0.9 0.59 10.3 0.9 2.3 1 1 0 1 1 1 0 Tetratricopeptide repeat TUSC2 PF15000.6 RKO91394.1 - 0.11 12.8 0.1 0.12 12.7 0.1 1.2 1 0 0 1 1 1 0 Tumour suppressor candidate 2 SGS PF05002.15 RKO91395.1 - 1.9e-30 104.8 0.0 3e-30 104.2 0.0 1.3 1 0 0 1 1 1 1 SGS domain CS PF04969.16 RKO91395.1 - 5.2e-15 56.2 0.1 9.3e-15 55.4 0.1 1.4 1 0 0 1 1 1 1 CS domain NPR3 PF03666.13 RKO91397.1 - 5.8 5.6 6.4 7.8 5.2 6.4 1.2 1 0 0 1 1 1 0 Nitrogen Permease regulator of amino acid transport activity 3 Myosin_tail_1 PF01576.19 RKO91400.1 - 0.15 9.8 1.7 0.22 9.3 1.7 1.1 1 0 0 1 1 1 0 Myosin tail ATG16 PF08614.11 RKO91400.1 - 0.32 11.2 4.4 0.7 10.1 2.9 2.0 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Ank_2 PF12796.7 RKO91401.1 - 4.5e-25 88.1 0.0 1.9e-12 47.6 0.0 3.6 2 2 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO91401.1 - 5.4e-23 81.1 4.6 3.9e-09 36.9 0.0 5.2 4 1 1 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO91401.1 - 5.6e-19 66.2 1.5 0.003 17.9 0.0 6.8 6 0 0 6 6 6 4 Ankyrin repeat Ank_5 PF13857.6 RKO91401.1 - 2.2e-18 66.0 4.8 4.6e-08 33.2 0.0 5.7 3 1 2 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 RKO91401.1 - 1.3e-11 44.4 14.1 0.0019 18.5 0.0 6.8 8 0 0 8 8 8 3 Ankyrin repeat UPF0020 PF01170.18 RKO91401.1 - 0.00077 19.2 0.3 0.41 10.3 0.3 2.5 3 0 0 3 3 3 2 Putative RNA methylase family UPF0020 AviRa PF11599.8 RKO91401.1 - 0.018 14.5 0.3 7.3 6.0 0.5 2.4 1 1 1 2 2 2 0 RRNA methyltransferase AviRa Pro_isomerase PF00160.21 RKO91402.1 - 4.9e-46 156.9 0.3 5.4e-46 156.7 0.3 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PNK3P PF08645.11 RKO91403.1 - 1.7e-47 161.2 0.0 2.3e-47 160.7 0.0 1.2 1 0 0 1 1 1 1 Polynucleotide kinase 3 phosphatase AAA_33 PF13671.6 RKO91403.1 - 3e-12 46.9 0.0 6.4e-10 39.3 0.0 2.4 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.10 RKO91403.1 - 0.00018 21.1 0.1 0.0096 15.4 0.0 2.1 1 1 1 2 2 2 1 Chromatin associated protein KTI12 Hemerythrin PF01814.23 RKO91403.1 - 0.017 15.8 0.0 0.028 15.1 0.0 1.3 1 0 0 1 1 1 0 Hemerythrin HHE cation binding domain P34-Arc PF04045.14 RKO91403.1 - 0.04 13.6 0.1 0.06 13.0 0.1 1.2 1 0 0 1 1 1 0 Arp2/3 complex, 34 kD subunit p34-Arc MMR_HSR1 PF01926.23 RKO91403.1 - 0.059 13.5 0.1 0.15 12.2 0.1 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase Zeta_toxin PF06414.12 RKO91403.1 - 0.13 11.5 0.0 0.35 10.1 0.0 1.7 1 1 1 2 2 2 0 Zeta toxin CPT PF07931.12 RKO91403.1 - 0.19 11.6 0.0 4 7.2 0.0 2.3 1 1 1 2 2 2 0 Chloramphenicol phosphotransferase-like protein Ank_4 PF13637.6 RKO91404.1 - 4.9e-07 30.2 0.1 0.55 10.9 0.1 4.9 3 2 1 4 4 4 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO91404.1 - 0.0001 22.5 0.0 2 8.8 0.0 4.4 4 2 2 6 6 6 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO91404.1 - 0.031 14.9 0.1 1.3 9.6 0.1 3.1 3 1 0 3 3 3 0 Ankyrin repeats (3 copies) FKBP_C PF00254.28 RKO91405.1 - 7.1e-30 103.2 0.0 8.2e-30 103.0 0.0 1.0 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase CENP-S PF15630.6 RKO91406.1 - 3.3e-07 30.6 0.0 0.032 14.6 0.0 2.3 2 0 0 2 2 2 2 CENP-S protein Telomere_reg-2 PF10193.9 RKO91407.1 - 1.7e-28 99.2 0.0 5.1e-28 97.7 0.0 1.9 1 0 0 1 1 1 1 Telomere length regulation protein Peptidase_S8 PF00082.22 RKO91409.1 - 8.1e-18 64.7 0.0 2.1e-16 60.0 0.0 2.2 1 1 0 1 1 1 1 Subtilase family PA PF02225.22 RKO91409.1 - 0.0036 17.3 1.1 0.0098 15.9 1.1 1.7 1 0 0 1 1 1 1 PA domain Reeler PF02014.16 RKO91410.1 - 1.6e-07 32.1 0.0 2.4e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 Reeler domain ArabFuran-catal PF09206.11 RKO91410.1 - 0.017 14.4 0.0 0.019 14.3 0.0 1.1 1 0 0 1 1 1 0 Alpha-L-arabinofuranosidase B, catalytic PROCN PF08083.11 RKO91411.1 - 1.1e-201 669.9 5.0 1.6e-201 669.3 5.0 1.2 1 0 0 1 1 1 1 PROCN (NUC071) domain PRO8NT PF08082.11 RKO91411.1 - 4.3e-88 293.0 3.6 4.3e-88 293.0 3.6 2.0 3 0 0 3 3 3 1 PRO8NT (NUC069), PrP8 N-terminal domain Lipase_GDSL_2 PF13472.6 RKO91412.1 - 1.4e-05 25.6 0.0 1.7e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Lipase_GDSL_2 PF13472.6 RKO91413.1 - 1.3e-10 42.0 0.1 1.6e-10 41.6 0.1 1.1 1 0 0 1 1 1 1 GDSL-like Lipase/Acylhydrolase family Kelch_1 PF01344.25 RKO91414.1 - 2.4e-06 27.0 0.8 0.00015 21.3 0.0 3.2 3 0 0 3 3 3 1 Kelch motif Kelch_4 PF13418.6 RKO91414.1 - 3.2e-05 23.8 0.4 0.012 15.6 0.0 3.6 3 0 0 3 3 3 1 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO91414.1 - 0.00017 21.7 0.1 0.018 15.3 0.0 3.2 2 0 0 2 2 2 1 Kelch motif PSI PF01437.25 RKO91414.1 - 0.0006 20.3 8.5 0.0006 20.3 8.5 2.1 2 0 0 2 2 2 1 Plexin repeat Kelch_3 PF13415.6 RKO91414.1 - 0.011 16.1 2.2 0.19 12.1 0.0 3.8 4 0 0 4 4 4 0 Galactose oxidase, central domain PSI_integrin PF17205.3 RKO91414.1 - 0.14 12.0 7.5 0.3 10.9 7.5 1.6 1 0 0 1 1 1 0 Integrin plexin domain eIF-3c_N PF05470.12 RKO91415.1 - 1.1e-196 654.8 12.2 1.3e-196 654.5 12.2 1.1 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit 8 N-terminus PCI PF01399.27 RKO91415.1 - 1.1e-13 51.6 0.0 1.2e-12 48.3 0.0 2.9 2 0 0 2 2 2 1 PCI domain Med30 PF11315.8 RKO91415.1 - 1.4 9.2 9.5 0.067 13.4 1.0 3.1 4 0 0 4 4 4 0 Mediator complex subunit 30 Pyr_redox_2 PF07992.14 RKO91416.1 - 2.9e-44 151.5 0.0 4.5e-44 150.9 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 RKO91416.1 - 1.3e-05 25.7 0.0 6.3e-05 23.5 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 RKO91416.1 - 0.054 12.6 0.0 0.17 10.9 0.0 1.8 2 0 0 2 2 2 0 FAD binding domain GATase PF00117.28 RKO91417.1 - 7.9e-39 133.4 0.0 1.1e-38 132.9 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Chorismate_bind PF00425.18 RKO91417.1 - 7e-27 94.6 0.0 1.2e-26 93.8 0.0 1.4 1 0 0 1 1 1 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 RKO91417.1 - 8.8e-13 48.7 0.0 2.1e-07 31.2 0.0 2.4 2 0 0 2 2 2 2 Anthranilate synthase component I, N terminal region Peptidase_C26 PF07722.13 RKO91417.1 - 2.2e-10 40.7 0.0 3.2e-10 40.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase C26 GTP_EFTU PF00009.27 RKO91418.1 - 2.3e-52 177.4 0.0 3.4e-52 176.8 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 RKO91418.1 - 9.6e-38 128.7 0.1 1.8e-37 127.8 0.1 1.5 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 RKO91418.1 - 4.8e-31 106.7 0.0 1e-30 105.6 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 RKO91418.1 - 5.1e-12 46.0 0.0 1.4e-11 44.6 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RF3_C PF16658.5 RKO91418.1 - 9.5e-06 25.5 0.0 4.4e-05 23.3 0.0 2.0 2 0 0 2 2 2 1 Class II release factor RF3, C-terminal domain DUF4429 PF14472.6 RKO91419.1 - 0.065 13.8 0.0 0.22 12.1 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4429) NUDE_C PF04880.13 RKO91421.1 - 0.85 10.1 7.1 1.8 9.0 7.1 1.5 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Ribosomal_S3Ae PF01015.18 RKO91422.1 - 4e-86 287.7 1.5 5e-86 287.4 1.5 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family ATP-synt_D PF01813.17 RKO91422.1 - 0.0065 16.3 0.4 0.014 15.2 0.4 1.5 1 1 0 1 1 1 1 ATP synthase subunit D Abhydro_lipase PF04083.16 RKO91422.1 - 0.026 14.1 0.0 0.065 12.8 0.0 1.6 1 0 0 1 1 1 0 Partial alpha/beta-hydrolase lipase region TipAS PF07739.13 RKO91422.1 - 0.078 13.5 0.1 0.55 10.8 0.0 2.0 1 1 1 2 2 2 0 TipAS antibiotic-recognition domain Ribosomal_L35p PF01632.19 RKO91422.1 - 0.12 12.9 0.2 0.23 12.0 0.2 1.5 1 0 0 1 1 1 0 Ribosomal protein L35 DEAD PF00270.29 RKO91423.1 - 5.5e-49 166.3 0.0 8e-49 165.8 0.0 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO91423.1 - 6.5e-30 103.7 0.0 9.6e-28 96.8 0.0 2.6 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO91423.1 - 0.00058 19.9 0.0 0.00095 19.2 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit CMS1 PF14617.6 RKO91423.1 - 0.17 11.2 0.0 0.35 10.2 0.0 1.5 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit Ribonuc_L-PSP PF01042.21 RKO91424.1 - 5.1e-21 74.9 0.1 5.5e-21 74.8 0.1 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP Sel1 PF08238.12 RKO91425.1 - 8.3e-37 124.8 12.9 2.8e-11 43.7 0.2 5.3 5 0 0 5 5 5 5 Sel1 repeat TPR_6 PF13174.6 RKO91425.1 - 0.0064 17.1 5.7 21 6.0 0.0 4.5 3 2 1 4 4 4 2 Tetratricopeptide repeat Lon_C PF05362.13 RKO91429.1 - 2e-76 256.1 0.2 3.6e-76 255.3 0.2 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA PF00004.29 RKO91429.1 - 9e-20 71.4 0.0 1.8e-19 70.4 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) LON_substr_bdg PF02190.16 RKO91429.1 - 9.5e-10 38.7 0.1 1.9e-05 24.6 0.1 2.4 1 1 1 2 2 2 2 ATP-dependent protease La (LON) substrate-binding domain AAA_5 PF07728.14 RKO91429.1 - 2e-08 34.3 0.0 4.8e-08 33.1 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) ChlI PF13541.6 RKO91429.1 - 2.3e-08 33.9 0.0 4.8e-08 32.9 0.0 1.6 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_2 PF07724.14 RKO91429.1 - 1.8e-05 24.9 0.0 5.3e-05 23.4 0.0 1.7 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_PrkA PF08298.11 RKO91429.1 - 2.6e-05 23.3 0.0 4.4e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 PrkA AAA domain AAA_3 PF07726.11 RKO91429.1 - 0.00063 19.6 0.0 0.0017 18.2 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 RKO91429.1 - 0.0008 19.2 0.0 0.0042 16.9 0.0 2.1 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 RKO91429.1 - 0.00085 19.7 3.4 0.0017 18.8 0.1 2.6 2 2 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 RKO91429.1 - 0.0021 18.3 0.1 0.11 12.8 0.1 2.7 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 RKO91429.1 - 0.0023 17.9 0.0 0.005 16.8 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_18 PF13238.6 RKO91429.1 - 0.0039 17.7 0.1 0.0085 16.6 0.1 1.5 1 0 0 1 1 1 1 AAA domain NB-ARC PF00931.22 RKO91429.1 - 0.028 13.6 0.0 0.049 12.8 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain IstB_IS21 PF01695.17 RKO91429.1 - 0.034 13.9 0.0 0.088 12.5 0.0 1.7 1 0 0 1 1 1 0 IstB-like ATP binding protein RNA_helicase PF00910.22 RKO91429.1 - 0.037 14.4 0.0 0.089 13.2 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_14 PF13173.6 RKO91429.1 - 0.046 13.8 0.0 0.083 12.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 RKO91429.1 - 0.082 12.9 0.0 0.21 11.6 0.0 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rad17 PF03215.15 RKO91429.1 - 0.092 12.7 0.1 0.27 11.1 0.1 1.7 1 1 1 2 2 2 0 Rad17 P-loop domain SKI PF01202.22 RKO91429.1 - 0.12 12.5 1.1 0.21 11.7 0.2 1.9 2 0 0 2 2 1 0 Shikimate kinase AAA_23 PF13476.6 RKO91429.1 - 0.12 12.9 3.4 2 8.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain YEATS PF03366.16 RKO91430.1 - 3.9e-33 113.3 0.2 5.2e-33 112.9 0.2 1.2 1 0 0 1 1 1 1 YEATS family DUF1769 PF08588.10 RKO91436.1 - 3.5e-07 30.3 0.1 6.5e-07 29.5 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1769) Ofd1_CTDD PF10637.9 RKO91437.1 - 1e-79 267.5 0.0 2.4e-76 256.5 0.0 2.3 2 1 0 2 2 2 2 Oxoglutarate and iron-dependent oxygenase degradation C-term 2OG-FeII_Oxy_4 PF13661.6 RKO91437.1 - 7.1e-31 106.7 0.0 1.3e-30 105.9 0.0 1.5 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_3 PF13640.6 RKO91437.1 - 3.8e-15 56.6 0.0 6.7e-15 55.8 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily Tmemb_185A PF10269.9 RKO91438.1 - 9.4e-07 28.8 7.4 1.4e-05 24.9 1.2 2.2 1 1 1 2 2 2 2 Transmembrane Fragile-X-F protein COX1 PF00115.20 RKO91439.1 - 6.7e-141 470.1 62.3 8.2e-141 469.8 62.3 1.1 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I IF-2 PF11987.8 RKO91440.1 - 5.7e-26 90.7 2.9 6.3e-26 90.6 1.0 2.0 2 0 0 2 2 2 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 RKO91440.1 - 2.4e-06 27.8 0.1 0.023 15.1 0.0 2.7 2 0 0 2 2 2 2 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.6 RKO91440.1 - 0.013 15.3 0.3 0.077 12.9 0.0 2.3 2 0 0 2 2 2 0 Elongation factor Tu domain 4 LOR PF04525.12 RKO91441.1 - 0.028 14.0 0.1 0.043 13.4 0.1 1.3 1 0 0 1 1 1 0 LURP-one-related MukF_M PF17192.4 RKO91442.1 - 0.00051 19.8 4.3 0.00064 19.5 4.3 1.2 1 0 0 1 1 1 1 MukF middle domain CALCOCO1 PF07888.11 RKO91442.1 - 0.0014 17.6 8.3 0.0016 17.4 8.3 1.0 1 0 0 1 1 1 1 Calcium binding and coiled-coil domain (CALCOCO1) like Tropomyosin_1 PF12718.7 RKO91442.1 - 0.0014 18.7 6.3 0.0014 18.7 6.3 1.5 1 1 0 1 1 1 1 Tropomyosin like Fez1 PF06818.15 RKO91442.1 - 0.0034 17.8 4.2 0.0034 17.8 4.2 1.5 1 1 0 1 1 1 1 Fez1 DUF3584 PF12128.8 RKO91442.1 - 0.0043 14.7 7.5 0.0047 14.5 7.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) HrpB7 PF09486.10 RKO91442.1 - 0.0053 17.1 8.0 0.36 11.2 3.3 2.1 1 1 1 2 2 2 2 Bacterial type III secretion protein (HrpB7) HMMR_N PF15905.5 RKO91442.1 - 0.0068 15.9 4.7 0.011 15.2 4.7 1.4 1 1 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal Tropomyosin PF00261.20 RKO91442.1 - 0.014 14.8 9.5 0.017 14.5 9.5 1.2 1 0 0 1 1 1 0 Tropomyosin Cep57_MT_bd PF06657.13 RKO91442.1 - 0.015 15.7 1.9 0.027 14.9 1.0 1.8 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Spc7 PF08317.11 RKO91442.1 - 0.02 13.8 7.7 0.025 13.5 7.7 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein CC2-LZ PF16516.5 RKO91442.1 - 0.035 14.5 4.9 1.2 9.6 1.6 2.6 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator HIP1_clath_bdg PF16515.5 RKO91442.1 - 0.036 14.7 6.7 0.26 11.9 2.8 2.2 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF4407 PF14362.6 RKO91442.1 - 0.053 12.9 8.3 0.071 12.5 8.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Atg14 PF10186.9 RKO91442.1 - 0.097 11.7 8.5 0.9 8.6 0.3 2.0 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF724 PF05266.14 RKO91442.1 - 0.097 12.5 2.5 0.14 12.0 2.5 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF724) DUF87 PF01935.17 RKO91442.1 - 0.1 12.7 2.3 0.12 12.5 2.3 1.0 1 0 0 1 1 1 0 Helicase HerA, central domain DUF16 PF01519.16 RKO91442.1 - 0.11 13.0 3.7 0.23 12.0 2.9 1.8 1 1 1 2 2 2 0 Protein of unknown function DUF16 AAA_13 PF13166.6 RKO91442.1 - 0.12 11.0 5.4 0.11 11.1 3.4 1.4 1 1 1 2 2 2 0 AAA domain Lentivirus_VIF PF05851.11 RKO91442.1 - 0.15 10.9 0.1 0.18 10.7 0.1 1.1 1 0 0 1 1 1 0 Lentivirus virion infectivity factor (VIF) OmpH PF03938.14 RKO91442.1 - 0.18 12.1 9.4 0.42 10.9 9.4 1.6 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF641 PF04859.12 RKO91442.1 - 0.22 11.8 5.5 5.9 7.2 1.9 2.6 1 1 2 3 3 3 0 Plant protein of unknown function (DUF641) UPF0242 PF06785.11 RKO91442.1 - 0.24 11.5 7.9 0.25 11.4 6.4 1.6 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Csm1_N PF18504.1 RKO91442.1 - 0.29 11.5 8.3 2.4 8.6 0.2 3.5 1 1 3 4 4 4 0 Csm1 N-terminal domain DUF3552 PF12072.8 RKO91442.1 - 0.35 10.3 10.6 0.45 9.9 10.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) BST2 PF16716.5 RKO91442.1 - 0.38 11.4 7.3 0.72 10.5 5.7 2.2 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 ThiS PF02597.20 RKO91442.1 - 0.38 11.4 3.0 3.3 8.4 0.4 2.3 1 1 1 2 2 2 0 ThiS family SecD-TM1 PF13721.6 RKO91442.1 - 0.62 10.6 2.6 5.6 7.5 0.2 2.3 1 1 1 2 2 2 0 SecD export protein N-terminal TM region AHSP PF09236.10 RKO91442.1 - 0.74 10.3 3.2 2.9 8.4 0.2 2.7 2 1 2 4 4 4 0 Alpha-haemoglobin stabilising protein UPF0449 PF15136.6 RKO91442.1 - 0.79 10.2 7.6 0.42 11.1 2.6 2.2 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 FAM76 PF16046.5 RKO91442.1 - 1.2 8.5 3.8 2.7 7.3 3.8 1.6 1 1 0 1 1 1 0 FAM76 protein DUF802 PF05650.11 RKO91442.1 - 4.1 7.9 11.5 8.6 6.9 1.5 3.1 3 1 1 4 4 3 0 Domain of unknown function (DUF802) FUSC PF04632.12 RKO91442.1 - 9.4 4.6 6.3 11 4.4 6.3 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family Ank_4 PF13637.6 RKO91447.1 - 0.061 13.9 0.0 0.25 12.0 0.0 1.9 2 0 0 2 2 2 0 Ankyrin repeats (many copies) Cep57_CLD PF14073.6 RKO91448.1 - 4.4e-09 36.6 23.6 2.4e-06 27.7 2.8 2.8 2 0 0 2 2 2 2 Centrosome localisation domain of Cep57 Cep57_MT_bd PF06657.13 RKO91448.1 - 3.1e-07 30.7 12.5 0.0079 16.6 0.0 4.9 4 0 0 4 4 4 2 Centrosome microtubule-binding domain of Cep57 KxDL PF10241.9 RKO91448.1 - 0.00033 20.9 2.6 0.00082 19.6 2.6 1.7 1 0 0 1 1 1 1 Uncharacterized conserved protein DUF1192 PF06698.11 RKO91448.1 - 0.071 13.2 5.6 1.3 9.1 0.2 4.3 4 0 0 4 4 4 0 Protein of unknown function (DUF1192) HAUS-augmin3 PF14932.6 RKO91448.1 - 0.075 12.6 18.9 0.69 9.4 2.3 3.1 3 0 0 3 3 3 0 HAUS augmin-like complex subunit 3 EzrA PF06160.12 RKO91448.1 - 4.9 5.2 12.7 5.4 5.1 8.3 2.1 2 0 0 2 2 2 0 Septation ring formation regulator, EzrA tRNA-synt_1 PF00133.22 RKO91449.1 - 6.9e-254 843.6 0.1 1.1e-222 740.6 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 RKO91449.1 - 1e-56 191.1 0.2 1.6e-27 96.3 0.0 2.3 2 0 0 2 2 2 2 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 RKO91449.1 - 2.6e-17 62.7 2.2 0.00025 19.9 0.0 4.3 4 0 0 4 4 4 4 tRNA synthetases class I (M) DUF3322 PF11795.8 RKO91449.1 - 2e-05 24.7 0.1 0.4 10.7 0.0 2.9 3 0 0 3 3 3 2 Uncharacterized protein conserved in bacteria N-term (DUF3322) Peptidase_M10 PF00413.24 RKO91449.1 - 0.00016 21.5 0.5 0.97 9.3 0.0 2.8 3 0 0 3 3 3 2 Matrixin tRNA-synt_1e PF01406.19 RKO91449.1 - 0.00019 20.9 0.0 1.1 8.6 0.0 2.9 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain AHSP PF09236.10 RKO91449.1 - 0.0012 19.2 0.0 4.3 7.9 0.0 3.0 2 0 0 2 2 2 2 Alpha-haemoglobin stabilising protein HEPN PF05168.14 RKO91449.1 - 4.1 7.6 6.2 1.2e+02 2.9 0.1 4.3 5 0 0 5 5 5 0 HEPN domain Cse1 PF08506.10 RKO91450.1 - 1e-149 498.4 5.8 1.5e-149 497.9 5.8 1.3 1 0 0 1 1 1 1 Cse1 CAS_CSE1 PF03378.15 RKO91450.1 - 1.2e-103 347.0 0.6 1.2e-103 347.0 0.6 1.8 2 0 0 2 2 2 1 CAS/CSE protein, C-terminus IBN_N PF03810.19 RKO91450.1 - 1.3e-18 66.7 0.3 6.8e-16 58.0 0.0 4.0 4 0 0 4 4 4 1 Importin-beta N-terminal domain Phyto_Pns9_10 PF05878.11 RKO91450.1 - 0.0079 15.4 0.0 0.019 14.2 0.0 1.5 1 0 0 1 1 1 1 Phytoreovirus nonstructural protein Pns9/Pns10 Xpo1 PF08389.12 RKO91450.1 - 0.019 15.0 5.4 0.15 12.1 0.1 4.0 2 1 1 4 4 4 0 Exportin 1-like protein zf-C2H2 PF00096.26 RKO91451.1 - 1.3e-05 25.3 14.2 0.00019 21.7 2.4 3.3 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 RKO91451.1 - 0.00015 21.9 1.0 0.1 12.9 0.1 2.7 2 1 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-C2H2_4 PF13894.6 RKO91451.1 - 0.0012 19.5 11.9 0.0016 19.1 2.0 3.3 3 0 0 3 3 3 1 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO91451.1 - 0.0028 18.0 10.2 0.26 11.8 2.8 2.9 2 0 0 2 2 2 2 Zinc-finger double domain zf-met PF12874.7 RKO91451.1 - 0.019 15.4 2.2 5.2 7.6 0.0 2.8 3 0 0 3 3 3 0 Zinc-finger of C2H2 type GAGA PF09237.11 RKO91451.1 - 0.04 13.7 0.9 0.11 12.3 0.9 1.7 1 0 0 1 1 1 0 GAGA factor zf-nanos PF05741.13 RKO91451.1 - 0.052 13.8 3.3 0.13 12.5 3.3 1.7 1 0 0 1 1 1 0 Nanos RNA binding domain YdjO PF14169.6 RKO91451.1 - 3.6 7.4 5.4 27 4.6 5.4 2.3 1 1 0 1 1 1 0 Cold-inducible protein YdjO Orn_Arg_deC_N PF02784.16 RKO91453.1 - 6.1e-76 255.1 0.0 7.9e-76 254.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 RKO91453.1 - 6.1e-20 71.3 0.0 7.8e-20 70.9 0.0 1.4 1 1 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain B12-binding PF02310.19 RKO91453.1 - 0.14 12.2 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 B12 binding domain UxaE PF16257.5 RKO91453.1 - 0.16 10.6 0.0 0.23 10.1 0.0 1.1 1 0 0 1 1 1 0 tagaturonate epimerase Acyl-CoA_dh_1 PF00441.24 RKO91454.1 - 2e-47 161.1 2.4 3e-47 160.6 2.4 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 RKO91454.1 - 1.1e-27 96.1 0.0 1.9e-27 95.3 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 RKO91454.1 - 1.1e-26 93.7 0.0 2.2e-26 92.7 0.0 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 RKO91454.1 - 3.3e-18 66.3 0.2 3.3e-18 66.3 0.2 1.6 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain Antiterm PF03589.13 RKO91454.1 - 0.086 13.2 0.0 0.28 11.5 0.0 1.9 2 0 0 2 2 2 0 Antitermination protein GMP_synt_C PF00958.22 RKO91455.1 - 2e-35 120.7 0.1 2.1e-35 120.6 0.1 1.0 1 0 0 1 1 1 1 GMP synthase C terminal domain Imm63 PF15599.6 RKO91455.1 - 0.11 12.9 0.0 0.11 12.9 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 63 GATase PF00117.28 RKO91456.1 - 1.5e-14 54.2 0.0 3.3e-14 53.1 0.0 1.5 2 0 0 2 2 2 1 Glutamine amidotransferase class-I NAD_synthase PF02540.17 RKO91456.1 - 8.9e-06 25.0 0.0 2.2e-05 23.7 0.0 1.6 2 0 0 2 2 2 1 NAD synthase Peptidase_C26 PF07722.13 RKO91456.1 - 0.00055 19.7 0.0 0.0009 19.0 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 tRNA_Me_trans PF03054.16 RKO91456.1 - 0.019 13.8 0.1 0.025 13.4 0.1 1.2 1 0 0 1 1 1 0 tRNA methyl transferase PAPS_reduct PF01507.19 RKO91456.1 - 0.043 13.9 0.0 0.077 13.0 0.0 1.4 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family QueC PF06508.13 RKO91456.1 - 0.06 12.8 0.0 0.1 12.0 0.0 1.3 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC ThiI PF02568.14 RKO91456.1 - 0.076 12.6 0.1 0.12 11.9 0.1 1.3 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) MIP PF00230.20 RKO91456.1 - 0.15 11.8 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 Major intrinsic protein NmrA PF05368.13 RKO91458.1 - 2.8e-19 69.6 0.0 3.6e-19 69.2 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 RKO91458.1 - 3.5e-06 27.0 0.0 5.5e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding MBOAT PF03062.19 RKO91459.1 - 1e-24 87.6 15.4 4.3e-24 85.5 15.2 2.2 1 1 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family DivIC PF04977.15 RKO91459.1 - 0.074 12.8 0.0 0.17 11.6 0.0 1.6 1 0 0 1 1 1 0 Septum formation initiator RVT_connect PF06815.13 RKO91459.1 - 3.8 7.8 6.4 1.7 9.0 1.2 2.3 2 0 0 2 2 2 0 Reverse transcriptase connection domain NAD_binding_2 PF03446.15 RKO91460.1 - 7.2e-21 75.0 0.0 1.6e-20 73.9 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 RKO91460.1 - 8.4e-08 32.5 0.0 1.8e-07 31.4 0.0 1.6 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 RKO91460.1 - 0.00028 21.4 0.1 0.0017 18.9 0.0 2.2 1 1 1 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent YdaS_antitoxin PF15943.5 RKO91460.1 - 0.028 14.3 0.0 2.2 8.2 0.0 2.7 2 0 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT Sacchrp_dh_NADP PF03435.18 RKO91460.1 - 0.1 12.8 0.1 1.1 9.6 0.0 2.4 2 1 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain NTP_transf_3 PF12804.7 RKO91460.1 - 0.14 12.5 0.2 0.43 10.9 0.2 1.8 1 1 0 1 1 1 0 MobA-like NTP transferase domain dCache_1 PF02743.18 RKO91462.1 - 0.12 12.2 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 Cache domain dCache_1 PF02743.18 RKO91463.1 - 0.018 14.8 0.0 0.03 14.1 0.0 1.3 1 1 0 1 1 1 0 Cache domain DNA_ligase_A_M PF01068.21 RKO91464.1 - 8e-42 143.2 0.0 1.2e-41 142.6 0.0 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_C PF04679.15 RKO91464.1 - 1.3e-14 54.6 0.0 5.4e-14 52.6 0.0 2.2 2 0 0 2 2 2 1 ATP dependent DNA ligase C terminal region DNA_ligase_A_N PF04675.14 RKO91464.1 - 1.8e-14 54.4 0.0 3.5e-14 53.5 0.0 1.5 1 0 0 1 1 1 1 DNA ligase N terminus BRCT_2 PF16589.5 RKO91464.1 - 4.4e-07 30.2 0.0 0.002 18.5 0.0 2.7 2 0 0 2 2 2 2 BRCT domain, a BRCA1 C-terminus domain RNA_ligase PF09414.10 RKO91464.1 - 7.6e-06 26.3 0.0 1.2e-05 25.7 0.0 1.4 1 0 0 1 1 1 1 RNA ligase mRNA_cap_enzyme PF01331.19 RKO91464.1 - 0.00022 21.1 0.0 0.13 12.0 0.0 2.6 2 1 0 2 2 2 2 mRNA capping enzyme, catalytic domain BRCT PF00533.26 RKO91464.1 - 0.0025 18.2 0.0 0.067 13.6 0.0 3.0 3 0 0 3 3 3 1 BRCA1 C Terminus (BRCT) domain DNA_ligase_IV PF11411.8 RKO91464.1 - 0.0097 16.0 0.0 0.02 15.0 0.0 1.5 1 0 0 1 1 1 1 DNA ligase IV DSPc PF00782.20 RKO91466.1 - 2.9e-19 69.2 0.0 3.1e-19 69.1 0.0 1.0 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 RKO91466.1 - 0.028 14.0 0.0 0.028 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase HTH_37 PF13744.6 RKO91466.1 - 0.12 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain Integrase_H2C2 PF17921.1 RKO91467.1 - 1.1e-06 28.6 0.4 2.1e-06 27.7 0.0 1.6 2 0 0 2 2 2 1 Integrase zinc binding domain DUF1640 PF07798.11 RKO91468.1 - 3.8e-24 85.7 0.5 5.3e-24 85.2 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1640) Uso1_p115_C PF04871.13 RKO91468.1 - 0.0069 16.7 0.2 0.01 16.2 0.2 1.4 1 1 0 1 1 1 1 Uso1 / p115 like vesicle tethering protein, C terminal region IF2_N PF04760.15 RKO91468.1 - 0.054 13.3 0.4 0.11 12.3 0.4 1.6 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region Sds3 PF08598.11 RKO91468.1 - 0.15 12.0 4.8 0.32 11.0 4.8 1.5 1 1 0 1 1 1 0 Sds3-like SidE PF12252.8 RKO91468.1 - 0.24 8.9 4.4 0.28 8.7 4.4 1.0 1 0 0 1 1 1 0 Dot/Icm substrate protein DUF1192 PF06698.11 RKO91468.1 - 0.69 10.0 3.6 8.7 6.5 0.3 3.1 2 1 1 4 4 4 0 Protein of unknown function (DUF1192) CCDC-167 PF15188.6 RKO91469.1 - 0.014 15.8 4.3 1.7 9.0 0.1 3.6 3 0 0 3 3 3 0 Coiled-coil domain-containing protein 167 FlxA PF14282.6 RKO91469.1 - 0.02 14.9 0.5 4.5 7.3 0.1 3.4 3 1 0 3 3 3 0 FlxA-like protein Baculo_PEP_C PF04513.12 RKO91469.1 - 0.034 14.2 0.3 0.034 14.2 0.3 3.4 4 0 0 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus HAP1_N PF04849.13 RKO91469.1 - 0.11 11.7 4.1 0.56 9.3 1.5 2.8 2 1 1 3 3 3 0 HAP1 N-terminal conserved region AAA_13 PF13166.6 RKO91469.1 - 0.2 10.3 0.9 0.39 9.3 0.9 1.4 1 0 0 1 1 1 0 AAA domain DUF1664 PF07889.12 RKO91469.1 - 0.47 10.5 3.4 61 3.7 0.0 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF1664) GAS PF13851.6 RKO91469.1 - 3.3 7.0 11.0 8.1 5.7 0.0 3.5 4 0 0 4 4 4 0 Growth-arrest specific micro-tubule binding Fez1 PF06818.15 RKO91469.1 - 6.2 7.2 13.1 2.9 8.3 0.7 3.6 1 1 1 2 2 2 0 Fez1 Sel1 PF08238.12 RKO91472.1 - 2.2e-25 88.5 10.0 1.8e-08 34.7 0.5 4.1 4 0 0 4 4 4 4 Sel1 repeat OPT PF03169.15 RKO91473.1 - 2.5e-127 426.1 42.9 2.9e-127 425.9 42.9 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein PQQ_2 PF13360.6 RKO91475.1 - 0.0054 16.3 0.1 0.0076 15.9 0.1 1.2 1 0 0 1 1 1 1 PQQ-like domain PQQ_3 PF13570.6 RKO91475.1 - 0.026 15.0 0.1 2.4 8.7 0.0 2.6 2 0 0 2 2 2 0 PQQ-like domain PQQ PF01011.21 RKO91475.1 - 0.037 14.0 0.0 0.094 12.7 0.0 1.6 1 0 0 1 1 1 0 PQQ enzyme repeat ASH PF15780.5 RKO91477.1 - 0.00091 19.4 0.2 0.18 12.1 0.3 3.1 2 1 1 3 3 3 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin PapD-like PF14874.6 RKO91477.1 - 0.0018 18.4 0.5 0.25 11.5 0.1 3.1 3 0 0 3 3 3 1 Flagellar-associated PapD-like DUF4071 PF13281.6 RKO91477.1 - 0.18 10.8 4.8 0.41 9.6 4.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4071) Chitin_synth_2 PF03142.15 RKO91478.1 - 2.4e-241 801.9 0.1 3e-241 801.6 0.1 1.0 1 0 0 1 1 1 1 Chitin synthase Glyco_tranf_2_3 PF13641.6 RKO91478.1 - 7.6e-19 68.5 0.1 1.3e-16 61.2 0.1 2.2 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 RKO91478.1 - 2.5e-13 50.4 11.1 1.6e-12 47.7 11.1 2.3 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 RKO91478.1 - 7.5e-08 32.0 0.1 2.7e-05 23.7 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 21 Glycos_transf_2 PF00535.26 RKO91478.1 - 8.4e-07 28.9 0.0 0.00047 20.0 0.0 2.3 2 0 0 2 2 2 2 Glycosyl transferase family 2 PWWP PF00855.17 RKO91482.1 - 0.00019 21.8 0.0 0.00028 21.2 0.0 1.3 1 0 0 1 1 1 1 PWWP domain MMM1 PF10296.9 RKO91483.1 - 6.7e-47 160.1 0.0 4.1e-45 154.3 0.0 2.1 1 1 0 1 1 1 1 Maintenance of mitochondrial morphology protein 1 Ribosomal_L4 PF00573.22 RKO91484.1 - 1.7e-40 138.8 1.2 2.8e-40 138.1 1.2 1.3 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribos_L4_asso_C PF14374.6 RKO91484.1 - 1.5e-26 92.3 2.6 6.4e-25 87.0 0.9 2.5 2 0 0 2 2 2 2 60S ribosomal protein L4 C-terminal domain RNase_PH PF01138.21 RKO91485.1 - 1e-33 116.6 0.0 1.6e-33 116.0 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 RKO91485.1 - 0.00043 20.3 0.1 0.00096 19.1 0.1 1.6 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 HLH PF00010.26 RKO91486.1 - 2.1e-08 34.0 0.4 2.3e-08 33.8 0.4 1.1 1 0 0 1 1 1 1 Helix-loop-helix DNA-binding domain DUF2254 PF10011.9 RKO91486.1 - 0.14 10.9 0.0 0.15 10.8 0.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) 3HCDH_N PF02737.18 RKO91487.1 - 4.2e-07 30.0 1.8 2.4e-06 27.6 0.3 2.4 2 1 1 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MFS_3 PF05977.13 RKO91488.1 - 0.0025 16.3 1.5 0.0036 15.8 1.5 1.2 1 0 0 1 1 1 1 Transmembrane secretion effector MFS_1 PF07690.16 RKO91489.1 - 2.1e-09 36.8 8.9 2.5e-09 36.5 8.8 1.2 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO91489.1 - 8.8e-05 21.5 2.2 0.0001 21.4 2.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter TPT PF03151.16 RKO91491.1 - 8.9e-26 90.9 23.7 1.1e-25 90.6 23.7 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 RKO91491.1 - 1.6e-05 25.1 14.5 1.6e-05 25.1 14.5 2.1 2 0 0 2 2 2 2 EamA-like transporter family DUF3435 PF11917.8 RKO91492.1 - 5.5 5.8 7.6 33 3.3 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3435) DUF2370 PF10176.9 RKO91493.1 - 3.1e-59 200.4 0.2 2.8e-50 171.1 0.0 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF2370) DUF202 PF02656.15 RKO91493.1 - 0.047 14.2 1.8 0.49 10.9 1.8 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF202) RA PF00788.23 RKO91496.1 - 6.9e-16 58.7 0.0 4.8e-07 30.3 0.0 2.5 2 0 0 2 2 2 2 Ras association (RalGDS/AF-6) domain SH3_1 PF00018.28 RKO91496.1 - 0.00052 19.6 0.1 0.00094 18.7 0.1 1.4 1 0 0 1 1 1 1 SH3 domain RRM_1 PF00076.22 RKO91499.1 - 0.033 14.0 0.0 0.069 13.0 0.0 1.6 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) S1-P1_nuclease PF02265.16 RKO91500.1 - 0.0003 20.7 0.0 0.00047 20.1 0.0 1.2 1 0 0 1 1 1 1 S1/P1 Nuclease Peptidase_M36 PF02128.15 RKO91500.1 - 0.084 12.0 0.0 0.11 11.7 0.0 1.1 1 0 0 1 1 1 0 Fungalysin metallopeptidase (M36) eRF1_2 PF03464.15 RKO91503.1 - 1.8e-45 154.5 0.1 3.1e-45 153.7 0.1 1.4 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 RKO91503.1 - 9e-36 122.8 0.2 1.7e-35 121.9 0.2 1.5 1 0 0 1 1 1 1 eRF1 domain 3 baeRF_family10 PF18854.1 RKO91503.1 - 5.7e-09 36.4 0.0 8.2e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 acVLRF1 PF18859.1 RKO91503.1 - 8.6e-09 35.8 0.0 1.3e-08 35.2 0.0 1.3 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor eRF1_1 PF03463.15 RKO91503.1 - 0.0028 17.7 0.0 0.0054 16.7 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 1 DUF3440 PF11922.8 RKO91503.1 - 0.08 12.6 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3440) Mito_carr PF00153.27 RKO91504.1 - 2.7e-57 190.7 3.9 6.3e-25 86.9 0.0 4.0 3 1 0 3 3 3 3 Mitochondrial carrier protein Serine_protease PF18405.1 RKO91504.1 - 8.6e-05 21.8 2.5 0.0079 15.4 0.2 3.0 3 0 0 3 3 3 2 Gammaproteobacterial serine protease 3HCDH_N PF02737.18 RKO91505.1 - 1.2e-56 191.5 2.8 2.4e-56 190.5 2.5 1.6 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 RKO91505.1 - 3.5e-33 114.1 0.2 8.6e-33 112.8 0.1 1.7 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Raco_middle PF17651.1 RKO91505.1 - 0.072 12.8 0.1 0.12 12.1 0.1 1.3 1 0 0 1 1 1 0 RACo middle region ADH_zinc_N PF00107.26 RKO91505.1 - 0.2 11.7 1.1 0.65 10.0 0.2 2.3 2 2 0 2 2 2 0 Zinc-binding dehydrogenase NAD_binding_2 PF03446.15 RKO91505.1 - 0.42 10.8 2.2 3.2 7.9 2.2 2.2 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase GLTSCR1 PF15249.6 RKO91506.1 - 5.8e-10 39.5 0.4 9.7e-10 38.8 0.4 1.3 1 0 0 1 1 1 1 Conserved region of unknown function on GLTSCR protein KAR9 PF08580.10 RKO91506.1 - 0.53 8.8 3.0 1 7.8 3.0 1.4 1 0 0 1 1 1 0 Yeast cortical protein KAR9 Xpo1 PF08389.12 RKO91507.1 - 2.9e-40 137.7 7.3 5.8e-40 136.8 7.3 1.5 1 0 0 1 1 1 1 Exportin 1-like protein CRM1_repeat PF18777.1 RKO91507.1 - 1.8e-18 65.7 0.4 4e-18 64.6 0.4 1.6 1 0 0 1 1 1 1 Chromosome region maintenance or exportin repeat Virul_fac_BrkB PF03631.15 RKO91507.1 - 0.1 12.2 0.1 0.15 11.6 0.1 1.3 1 0 0 1 1 1 0 Virulence factor BrkB Pkinase PF00069.25 RKO91508.1 - 1.4e-56 191.8 0.0 1.6e-54 185.1 0.0 2.1 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91508.1 - 1.6e-26 93.2 0.0 3.3e-15 56.1 0.0 2.1 2 0 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 RKO91508.1 - 0.00029 20.3 0.0 0.00043 19.7 0.0 1.3 1 0 0 1 1 1 1 Kinase-like KA1 PF02149.19 RKO91508.1 - 0.0026 17.5 0.0 0.0047 16.7 0.0 1.4 1 0 0 1 1 1 1 Kinase associated domain 1 APH PF01636.23 RKO91508.1 - 0.015 15.2 0.1 0.1 12.5 0.0 1.9 1 1 1 2 2 2 0 Phosphotransferase enzyme family Kdo PF06293.14 RKO91508.1 - 0.016 14.6 0.0 0.025 14.0 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 RKO91508.1 - 0.3 10.0 0.0 0.47 9.3 0.0 1.2 1 0 0 1 1 1 0 Haspin like kinase domain Ras PF00071.22 RKO91511.1 - 1.6e-15 57.0 0.0 3e-12 46.4 0.0 2.3 2 0 0 2 2 2 2 Ras family Roc PF08477.13 RKO91511.1 - 1.5e-06 28.5 0.0 0.038 14.2 0.0 2.3 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase Methyltransf_12 PF08242.12 RKO91511.1 - 3.8e-06 27.6 0.0 7.1e-06 26.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Arf PF00025.21 RKO91511.1 - 0.0083 15.6 0.0 0.016 14.7 0.0 1.4 1 0 0 1 1 1 1 ADP-ribosylation factor family Methyltransf_25 PF13649.6 RKO91511.1 - 0.071 13.8 0.0 0.4 11.4 0.0 2.2 1 1 0 1 1 1 0 Methyltransferase domain TniB PF05621.11 RKO91511.1 - 0.15 11.4 0.0 0.25 10.8 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein An_peroxidase PF03098.15 RKO91514.1 - 3.6e-36 124.8 0.0 2e-35 122.4 0.0 1.8 1 1 0 2 2 2 1 Animal haem peroxidase Cytochrom_B561 PF03188.16 RKO91515.1 - 0.0063 16.6 3.5 0.019 15.1 1.2 2.6 2 1 0 2 2 2 1 Eukaryotic cytochrome b561 DUF3784 PF12650.7 RKO91515.1 - 0.046 13.9 1.1 0.12 12.6 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3784) Cyt-b5 PF00173.28 RKO91515.1 - 0.071 13.3 0.0 0.15 12.3 0.0 1.5 1 0 0 1 1 1 0 Cytochrome b5-like Heme/Steroid binding domain EGF_Tenascin PF18720.1 RKO91516.1 - 0.001 19.1 6.5 0.0021 18.1 6.5 1.6 1 0 0 1 1 1 1 Tenascin EGF domain EGF_2 PF07974.13 RKO91516.1 - 0.11 12.9 13.5 0.22 11.9 13.5 1.5 1 0 0 1 1 1 0 EGF-like domain Integrin_B_tail PF07965.12 RKO91519.1 - 0.17 12.3 3.7 2 8.9 3.7 2.1 1 1 0 1 1 1 0 Integrin beta tail domain Ras_bdg_2 PF14847.6 RKO91519.1 - 0.45 10.9 2.8 2.3 8.6 0.4 2.2 1 1 1 2 2 2 0 Ras-binding domain of Byr2 FliP PF00813.20 RKO91519.1 - 0.68 9.8 2.2 0.87 9.4 2.2 1.3 1 0 0 1 1 1 0 FliP family FlgT_N PF16548.5 RKO91519.1 - 1.5 9.5 6.1 15 6.3 0.2 2.6 3 0 0 3 3 3 0 Flagellar assembly protein T, N-terminal domain Hrs_helical PF12210.8 RKO91520.1 - 0.15 12.6 1.8 0.18 12.4 0.1 2.0 3 1 0 3 3 3 0 Hepatocyte growth factor-regulated tyrosine kinase substrate RGS PF00615.19 RKO91521.1 - 1.1e-23 83.8 0.5 1.1e-23 83.8 0.5 2.1 3 0 0 3 3 3 1 Regulator of G protein signaling domain RGS_DHEX PF18148.1 RKO91521.1 - 7.3e-19 67.7 0.8 1.6e-18 66.6 0.8 1.5 1 0 0 1 1 1 1 Regulator of G-protein signalling DHEX domain DEP PF00610.21 RKO91521.1 - 2.2e-16 59.7 0.0 4.6e-16 58.6 0.0 1.6 1 0 0 1 1 1 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) G-gamma PF00631.22 RKO91521.1 - 0.00028 20.8 0.1 0.001 19.0 0.1 2.0 1 0 0 1 1 1 1 GGL domain Pex2_Pex12 PF04757.14 RKO91523.1 - 1.2e-51 175.5 5.5 1.4e-51 175.3 5.5 1.1 1 0 0 1 1 1 1 Pex2 / Pex12 amino terminal region zf-C3HC4_2 PF13923.6 RKO91523.1 - 4.6e-05 23.2 3.5 7.1e-05 22.6 3.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 RKO91523.1 - 9.2e-05 22.2 2.1 0.00014 21.6 2.1 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO91523.1 - 0.00074 19.3 3.1 0.0012 18.7 3.1 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 RKO91523.1 - 0.012 15.7 3.7 0.022 14.9 3.7 1.4 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 RKO91523.1 - 0.027 14.5 3.2 0.05 13.6 3.2 1.4 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_2 PF13639.6 RKO91523.1 - 0.027 14.8 3.5 0.043 14.2 3.5 1.3 1 0 0 1 1 1 0 Ring finger domain Prok-RING_4 PF14447.6 RKO91523.1 - 0.028 14.3 2.4 0.043 13.7 2.4 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 U-box PF04564.15 RKO91523.1 - 0.053 13.7 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 U-box domain RRF PF01765.19 RKO91524.1 - 1.8e-47 161.3 3.8 2.5e-47 160.9 3.8 1.2 1 0 0 1 1 1 1 Ribosome recycling factor DUF4473 PF14747.6 RKO91524.1 - 0.73 10.4 0.1 0.73 10.4 0.1 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4473) CENP-B_dimeris PF09026.10 RKO91524.1 - 1.2 9.6 8.1 0.93 9.9 6.5 1.7 2 0 0 2 2 2 0 Centromere protein B dimerisation domain WRNPLPNID PF15017.6 RKO91524.1 - 4.3 8.3 10.0 1.2e+02 3.6 0.0 2.6 2 0 0 2 2 2 0 Putative WW-binding domain and destruction box FAM176 PF14851.6 RKO91524.1 - 9.9 5.8 7.1 1.7 8.3 2.8 1.9 2 0 0 2 2 2 0 FAM176 family Solute_trans_a PF03619.16 RKO91525.1 - 1.2e-86 290.5 13.8 3.3e-86 289.1 13.8 1.6 1 1 0 1 1 1 1 Organic solute transporter Ostalpha Nairovirus_M PF07948.11 RKO91525.1 - 0.2 9.8 2.5 0.28 9.4 2.5 1.1 1 0 0 1 1 1 0 Nairovirus M polyprotein-like DUF3421 PF11901.8 RKO91526.1 - 1.4e-26 92.7 0.0 2.8e-13 49.9 0.0 2.9 1 1 2 3 3 3 3 Protein of unknown function (DUF3421) Arrestin_C PF02752.22 RKO91526.1 - 7.6e-15 55.5 0.0 1.9e-14 54.3 0.0 1.6 2 0 0 2 2 2 1 Arrestin (or S-antigen), C-terminal domain Arrestin_N PF00339.29 RKO91526.1 - 9.9e-06 25.7 0.1 0.0022 18.1 0.0 2.5 2 0 0 2 2 2 2 Arrestin (or S-antigen), N-terminal domain zf-MYND PF01753.18 RKO91528.1 - 4e-07 30.0 11.7 6.8e-07 29.3 11.7 1.4 1 0 0 1 1 1 1 MYND finger DUF3421 PF11901.8 RKO91529.1 - 7.3e-21 74.3 0.0 6e-12 45.6 0.0 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF3421) Arrestin_C PF02752.22 RKO91529.1 - 0.0068 16.9 0.0 2 8.9 0.0 2.2 2 0 0 2 2 2 2 Arrestin (or S-antigen), C-terminal domain Arrestin_N PF00339.29 RKO91529.1 - 0.15 12.1 0.2 0.81 9.7 0.1 2.1 2 0 0 2 2 2 0 Arrestin (or S-antigen), N-terminal domain Ribosomal_L29e PF01779.17 RKO91530.1 - 6.1e-22 77.7 8.8 7.6e-22 77.4 8.8 1.1 1 0 0 1 1 1 1 Ribosomal L29e protein family F-box-like PF12937.7 RKO91531.1 - 7.3e-06 25.8 0.6 1.8e-05 24.6 0.6 1.7 1 0 0 1 1 1 1 F-box-like LRR_6 PF13516.6 RKO91531.1 - 0.044 13.8 1.0 22 5.4 0.0 3.3 3 0 0 3 3 3 0 Leucine Rich repeat LRR_1 PF00560.33 RKO91531.1 - 0.055 14.0 1.4 41 5.3 0.0 4.2 4 0 0 4 4 4 0 Leucine Rich Repeat SDA1 PF05285.12 RKO91531.1 - 4.2 6.7 8.6 7.1 5.9 8.6 1.3 1 0 0 1 1 1 0 SDA1 UQ_con PF00179.26 RKO91534.1 - 8.7e-49 164.8 0.0 1e-48 164.6 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 RKO91534.1 - 0.0076 15.9 0.0 0.0096 15.6 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 RKO91534.1 - 0.038 14.3 0.0 0.045 14.0 0.0 1.3 1 0 0 1 1 1 0 RWD domain UEV PF05743.13 RKO91534.1 - 0.051 13.4 0.0 0.081 12.8 0.0 1.3 1 0 0 1 1 1 0 UEV domain Tho2 PF11262.8 RKO91535.1 - 0.26 10.4 0.0 0.3 10.2 0.0 1.1 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Sulfatase PF00884.23 RKO91536.1 - 3.9e-08 33.1 0.0 4.9e-08 32.7 0.0 1.1 1 0 0 1 1 1 1 Sulfatase Phosphodiest PF01663.22 RKO91536.1 - 1.7e-07 31.2 0.0 2.2e-07 30.8 0.0 1.1 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Metalloenzyme PF01676.18 RKO91536.1 - 2.1e-07 30.6 0.4 2.8e-07 30.2 0.4 1.1 1 0 0 1 1 1 1 Metalloenzyme superfamily DUF229 PF02995.17 RKO91536.1 - 0.16 10.5 0.0 0.16 10.5 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF229) DUF2633 PF11119.8 RKO91537.1 - 0.095 12.6 0.4 0.12 12.3 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) Asp PF00026.23 RKO91538.1 - 7.9e-25 87.9 0.0 8.6e-25 87.8 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 RKO91538.1 - 0.00044 20.1 0.0 0.00087 19.1 0.0 1.4 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal Peptidase_C78 PF07910.13 RKO91539.1 - 5e-35 120.9 0.0 6.8e-35 120.5 0.0 1.2 1 0 0 1 1 1 1 Peptidase family C78 F-box-like PF12937.7 RKO91540.1 - 1e-07 31.7 0.3 1.9e-07 30.9 0.0 1.6 2 0 0 2 2 2 1 F-box-like F-box PF00646.33 RKO91540.1 - 7.2e-06 25.7 0.0 1.4e-05 24.9 0.0 1.4 1 0 0 1 1 1 1 F-box domain DUF3934 PF13070.6 RKO91546.1 - 0.12 12.8 2.2 0.24 11.9 2.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3934) Viral_DNA_Zn_bi PF03728.13 RKO91547.1 - 0.017 15.7 0.1 0.023 15.2 0.1 1.2 1 0 0 1 1 1 0 Viral DNA-binding protein, zinc binding domain Polysacc_deac_1 PF01522.21 RKO91550.1 - 2.1e-11 43.8 0.0 2.4e-11 43.6 0.0 1.0 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 RKO91550.1 - 0.0034 16.6 0.0 0.0041 16.4 0.0 1.0 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Ribosomal_L11_N PF03946.14 RKO91551.1 - 1.3e-20 73.0 0.5 1.9e-20 72.5 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 RKO91551.1 - 4.2e-16 59.2 0.0 7.5e-16 58.4 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Chal_sti_synt_C PF02797.15 RKO91551.1 - 0.15 12.0 0.0 0.22 11.5 0.0 1.3 1 0 0 1 1 1 0 Chalcone and stilbene synthases, C-terminal domain 2-Hacid_dh_C PF02826.19 RKO91553.1 - 1.3e-28 99.6 0.0 2.3e-28 98.8 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 RKO91553.1 - 0.00053 19.7 0.0 0.00073 19.2 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 RKO91553.1 - 0.013 15.7 0.1 0.041 14.1 0.0 1.8 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase HWE_HK PF07536.14 RKO91554.1 - 0.067 13.9 0.5 0.067 13.9 0.5 3.1 4 1 0 4 4 4 0 HWE histidine kinase FTCD_C PF04961.12 RKO91554.1 - 0.08 12.7 5.1 0.21 11.3 5.1 1.7 1 0 0 1 1 1 0 Formiminotransferase-cyclodeaminase MRP-S28 PF10213.9 RKO91556.1 - 1.1e-11 45.3 0.0 3e-11 43.8 0.0 1.7 2 0 0 2 2 2 1 Mitochondrial ribosomal subunit protein LisH PF08513.11 RKO91557.1 - 2.6e-05 24.0 0.0 6.4e-05 22.8 0.0 1.7 1 0 0 1 1 1 1 LisH DnaJ PF00226.31 RKO91558.1 - 8.6e-24 83.4 0.4 2.1e-23 82.2 0.4 1.7 1 0 0 1 1 1 1 DnaJ domain zf-C2H2_jaz PF12171.8 RKO91558.1 - 7.7e-12 45.2 2.9 1.6e-11 44.2 2.9 1.6 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 RKO91558.1 - 2.7e-08 34.0 2.2 5.7e-08 32.9 2.2 1.6 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-C2H2_2 PF12756.7 RKO91558.1 - 0.0012 19.1 0.5 0.0035 17.6 0.5 1.8 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) zf-C2H2 PF00096.26 RKO91558.1 - 3 8.5 4.5 0.96 10.0 0.7 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type Zn_clus PF00172.18 RKO91559.1 - 0.0072 16.4 3.1 0.0072 16.4 3.1 2.2 2 0 0 2 2 2 1 Fungal Zn(2)-Cys(6) binuclear cluster domain PH PF00169.29 RKO91560.1 - 0.16 12.5 0.0 0.27 11.8 0.0 1.5 1 1 0 1 1 1 0 PH domain Pkinase PF00069.25 RKO91564.1 - 2.5e-05 23.8 0.1 0.075 12.4 0.0 2.2 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91564.1 - 0.063 12.6 0.0 0.36 10.1 0.0 1.9 2 0 0 2 2 2 0 Protein tyrosine kinase DNA_pol_A_exoN PF18305.1 RKO91564.1 - 0.2 11.9 0.0 0.65 10.3 0.0 1.7 2 0 0 2 2 2 0 3' to 5' exonuclease C-terminal domain DUF5393 PF17371.2 RKO91565.1 - 0.075 11.2 0.0 0.12 10.5 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5393) TPR_1 PF00515.28 RKO91567.1 - 1.7e-14 52.9 9.1 4.1e-05 23.2 0.3 3.9 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 RKO91567.1 - 2.3e-09 36.6 9.1 0.00039 20.3 0.2 4.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.6 RKO91567.1 - 9.1e-09 34.9 0.5 9.1e-09 34.9 0.5 2.4 1 1 1 2 2 2 1 TPR repeat TPR_3 PF07720.12 RKO91567.1 - 7.6e-05 22.6 0.6 0.00026 20.9 0.6 2.0 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 RKO91567.1 - 0.0013 19.0 0.9 0.0074 16.6 0.0 2.6 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 RKO91567.1 - 0.0017 18.6 3.0 0.0079 16.5 0.1 2.8 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 RKO91567.1 - 0.0045 17.7 1.0 0.22 12.4 0.0 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO91567.1 - 0.0089 16.7 2.7 0.016 15.8 0.0 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 RKO91567.1 - 0.014 15.9 0.2 0.014 15.9 0.2 2.9 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_7 PF13176.6 RKO91567.1 - 0.38 10.9 1.5 26 5.1 0.1 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF2749 PF10907.8 RKO91567.1 - 5.5 7.2 6.2 1.7 8.8 1.0 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2749) PP2C PF00481.21 RKO91568.1 - 3.1e-36 125.4 0.0 3.5e-36 125.2 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 RKO91568.1 - 2.5e-07 30.6 0.1 3.9e-07 29.9 0.1 1.3 1 1 0 1 1 1 1 Protein phosphatase 2C DUF3562 PF12085.8 RKO91568.1 - 0.19 11.4 0.1 0.82 9.3 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3562) B9-C2 PF07162.11 RKO91569.1 - 4.2e-41 141.0 0.2 1.2e-29 103.6 0.0 2.0 1 1 1 2 2 2 2 Ciliary basal body-associated, B9 protein Phlebovirus_G2 PF07245.11 RKO91569.1 - 0.19 10.2 0.0 0.23 9.9 0.0 1.0 1 0 0 1 1 1 0 Phlebovirus glycoprotein G2 COX14 PF14880.6 RKO91571.1 - 0.0032 17.3 0.0 0.0061 16.4 0.0 1.4 1 0 0 1 1 1 1 Cytochrome oxidase c assembly Pex2_Pex12 PF04757.14 RKO91572.1 - 2.6e-34 118.8 7.2 3e-34 118.6 7.2 1.0 1 0 0 1 1 1 1 Pex2 / Pex12 amino terminal region MMPL PF03176.15 RKO91572.1 - 1.2 8.0 4.1 13 4.6 0.1 2.1 1 1 0 2 2 2 0 MMPL family IBN_N PF03810.19 RKO91573.1 - 1.5e-15 56.8 0.3 7e-11 41.9 0.0 4.6 5 0 0 5 5 5 2 Importin-beta N-terminal domain Xpo1 PF08389.12 RKO91573.1 - 0.0011 19.0 0.1 0.0046 17.0 0.1 2.1 1 0 0 1 1 1 1 Exportin 1-like protein HEAT_2 PF13646.6 RKO91573.1 - 0.062 13.7 0.1 0.062 13.7 0.1 3.4 4 1 0 4 4 4 0 HEAT repeats HAT PF02184.16 RKO91577.1 - 2.9e-35 119.9 72.9 3.7e-15 55.6 0.3 15.4 16 1 0 16 16 16 7 HAT (Half-A-TPR) repeat TPR_14 PF13428.6 RKO91577.1 - 2.9e-21 74.3 39.0 0.001 19.7 0.7 12.4 7 3 7 14 14 12 7 Tetratricopeptide repeat TPR_19 PF14559.6 RKO91577.1 - 1.2e-18 67.4 5.0 0.0018 18.7 0.0 7.6 9 0 0 9 9 8 4 Tetratricopeptide repeat Suf PF05843.14 RKO91577.1 - 3.8e-12 46.8 23.0 0.00015 21.9 4.1 6.9 2 2 4 8 8 8 5 Suppressor of forked protein (Suf) TPR_17 PF13431.6 RKO91577.1 - 1.1e-11 44.3 4.1 0.0079 16.5 0.0 6.3 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_6 PF13174.6 RKO91577.1 - 7.4e-07 29.4 19.2 5.7 7.8 0.0 10.8 12 0 0 12 12 11 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO91577.1 - 3e-06 27.8 19.2 0.035 14.7 0.5 7.6 9 0 0 9 9 9 2 Tetratricopeptide repeat TPR_2 PF07719.17 RKO91577.1 - 4.3e-05 23.3 18.0 12 6.3 0.1 9.0 9 0 0 9 9 9 0 Tetratricopeptide repeat TPR_9 PF13371.6 RKO91577.1 - 0.00015 21.9 14.6 0.79 9.9 0.2 6.4 5 1 2 7 7 7 2 Tetratricopeptide repeat ATP-synt PF00231.19 RKO91577.1 - 0.0026 17.5 0.1 0.27 10.9 0.0 3.0 3 0 0 3 3 3 1 ATP synthase TPR_8 PF13181.6 RKO91577.1 - 0.013 15.7 15.6 10 6.6 0.0 8.2 10 0 0 10 10 8 0 Tetratricopeptide repeat Apt1 PF10351.9 RKO91577.1 - 0.11 11.3 2.6 0.2 10.5 2.6 1.3 1 0 0 1 1 1 0 Golgi-body localisation protein domain ComC PF03047.14 RKO91577.1 - 0.12 12.2 0.6 1.5 8.7 0.1 2.4 2 0 0 2 2 2 0 COMC family TPR_7 PF13176.6 RKO91577.1 - 0.12 12.4 9.9 9.3 6.5 0.1 6.1 6 0 0 6 6 6 0 Tetratricopeptide repeat Babuvirus_MP PF07234.11 RKO91577.1 - 0.13 12.5 0.1 49 4.1 0.0 3.4 3 0 0 3 3 3 0 Movement and RNA silencing protein TPR_10 PF13374.6 RKO91577.1 - 0.26 11.2 11.4 9.3 6.3 0.0 6.6 6 1 0 6 6 6 0 Tetratricopeptide repeat TPR_12 PF13424.6 RKO91577.1 - 0.55 10.6 11.9 7.6 6.9 0.1 6.6 7 2 0 7 7 6 0 Tetratricopeptide repeat Rubella_Capsid PF05750.11 RKO91578.1 - 0.002 17.8 3.4 0.0027 17.4 3.4 1.0 1 0 0 1 1 1 1 Rubella capsid protein FSIP1 PF15554.6 RKO91579.1 - 4.3e-10 39.3 0.0 1e-07 31.4 0.0 2.2 2 0 0 2 2 2 2 FSIP1 family Arr-ms PF12120.8 RKO91579.1 - 0.12 12.5 0.0 0.35 11.1 0.0 1.7 2 0 0 2 2 2 0 Rifampin ADP-ribosyl transferase Ctr PF04145.15 RKO91583.1 - 1.2e-23 84.4 10.0 9.9e-22 78.1 10.0 2.2 1 1 0 1 1 1 1 Ctr copper transporter family AAA_22 PF13401.6 RKO91584.1 - 3.1e-07 30.7 0.0 5.2e-07 30.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain SRP54 PF00448.22 RKO91584.1 - 1e-05 25.3 0.0 1.5e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain DEAD PF00270.29 RKO91584.1 - 6.5e-05 22.8 0.0 0.00013 21.8 0.0 1.4 1 1 0 1 1 1 1 DEAD/DEAH box helicase AAA_30 PF13604.6 RKO91584.1 - 7.5e-05 22.5 0.0 0.00012 21.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 RKO91584.1 - 0.00021 21.7 0.0 0.00032 21.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 RKO91584.1 - 0.0025 17.1 0.0 0.0034 16.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) T2SSE PF00437.20 RKO91584.1 - 0.0027 16.8 0.0 0.005 15.9 0.0 1.4 1 1 0 1 1 1 1 Type II/IV secretion system protein AAA_7 PF12775.7 RKO91584.1 - 0.003 17.1 0.0 0.0086 15.6 0.0 1.7 1 1 1 2 2 2 1 P-loop containing dynein motor region PhoH PF02562.16 RKO91584.1 - 0.0043 16.5 0.0 0.015 14.8 0.0 1.9 2 0 0 2 2 2 1 PhoH-like protein Flavi_DEAD PF07652.14 RKO91584.1 - 0.0091 16.0 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 Flavivirus DEAD domain ABC_tran PF00005.27 RKO91584.1 - 0.014 15.9 0.1 0.037 14.6 0.1 1.9 1 1 0 1 1 1 0 ABC transporter ResIII PF04851.15 RKO91584.1 - 0.019 15.0 0.0 3.1 7.8 0.0 2.2 1 1 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_16 PF13191.6 RKO91584.1 - 0.059 13.7 0.0 0.14 12.5 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain TrwB_AAD_bind PF10412.9 RKO91584.1 - 0.068 12.1 0.0 0.097 11.6 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Septin PF00735.18 RKO91584.1 - 0.088 12.1 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Septin AAA_14 PF13173.6 RKO91584.1 - 0.096 12.7 0.0 0.74 9.8 0.0 2.1 1 1 0 1 1 1 0 AAA domain AAA_11 PF13086.6 RKO91584.1 - 0.097 12.4 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 RKO91584.1 - 0.099 12.5 0.0 0.16 11.8 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase G-alpha PF00503.20 RKO91584.1 - 0.1 11.7 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_29 PF13555.6 RKO91584.1 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain TniB PF05621.11 RKO91584.1 - 0.12 11.8 0.1 0.23 10.8 0.1 1.6 1 1 0 1 1 1 0 Bacterial TniB protein Myosin_head PF00063.21 RKO91584.1 - 0.15 10.2 0.0 0.24 9.5 0.0 1.3 1 1 0 1 1 1 0 Myosin head (motor domain) NB-ARC PF00931.22 RKO91584.1 - 0.18 11.0 0.0 0.21 10.7 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain Roc PF08477.13 RKO91584.1 - 0.19 11.9 0.0 0.31 11.3 0.0 1.3 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_33 PF13671.6 RKO91584.1 - 0.28 11.3 1.1 4.3 7.5 0.1 2.7 2 2 0 3 3 3 0 AAA domain Trehalase PF01204.18 RKO91585.1 - 1.3e-157 525.8 0.0 1.6e-157 525.5 0.0 1.0 1 0 0 1 1 1 1 Trehalase Trehalase_Ca-bi PF07492.11 RKO91585.1 - 2e-14 53.0 0.2 3.6e-14 52.2 0.2 1.4 1 0 0 1 1 1 1 Neutral trehalase Ca2+ binding domain RRM_1 PF00076.22 RKO91586.1 - 1.3e-18 66.5 0.0 1.6e-18 66.3 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 RKO91586.1 - 0.13 12.2 0.0 0.21 11.5 0.0 1.4 1 1 0 1 1 1 0 Occluded RNA-recognition motif Pkinase PF00069.25 RKO91588.1 - 2.6e-61 207.3 0.0 3.5e-61 206.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91588.1 - 3.9e-45 154.2 0.0 6.4e-45 153.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO91588.1 - 1.2e-06 27.6 0.0 1.9e-06 26.9 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 RKO91588.1 - 0.00012 21.5 0.0 0.00026 20.4 0.0 1.5 2 0 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 RKO91588.1 - 0.037 13.0 0.0 0.06 12.3 0.0 1.3 1 0 0 1 1 1 0 Haspin like kinase domain RIO1 PF01163.22 RKO91588.1 - 0.083 12.5 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 RIO1 family Rep_4 PF05797.11 RKO91588.1 - 0.18 10.9 0.0 0.27 10.3 0.0 1.2 1 0 0 1 1 1 0 Yeast trans-acting factor (REP1/REP2) Seadorna_VP7 PF07387.11 RKO91588.1 - 0.22 10.6 0.0 0.34 9.9 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 Gtr1_RagA PF04670.12 RKO91589.1 - 1.7e-56 191.2 0.5 2.4e-56 190.7 0.5 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Kelch_6 PF13964.6 RKO91590.1 - 8e-09 35.5 6.5 0.13 12.6 0.1 5.9 6 0 0 6 6 6 2 Kelch motif Kelch_2 PF07646.15 RKO91590.1 - 0.012 15.6 7.7 20 5.4 0.0 6.1 6 1 0 6 6 6 0 Kelch motif DUF678 PF05077.12 RKO91590.1 - 0.18 12.0 1.3 39 4.5 0.1 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF678) Kelch_1 PF01344.25 RKO91590.1 - 5.3 6.7 13.6 2.2 8.0 0.0 4.7 5 0 0 5 5 5 0 Kelch motif Kelch_3 PF13415.6 RKO91590.1 - 7.2 7.0 29.7 0.33 11.3 2.1 7.7 8 2 0 8 8 8 0 Galactose oxidase, central domain Kelch_4 PF13418.6 RKO91590.1 - 7.3 6.7 24.8 1.4 9.0 0.2 6.9 7 1 0 7 7 7 0 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO91591.1 - 0.00046 20.4 1.8 8.2 6.9 0.1 4.9 5 0 0 5 5 5 2 Kelch motif Lysis_col PF02402.16 RKO91591.1 - 0.33 10.7 1.9 1.2 8.8 1.9 2.0 1 0 0 1 1 1 0 Lysis protein Kelch_1 PF01344.25 RKO91591.1 - 2.9 7.6 5.1 3.3 7.4 0.0 3.8 4 1 0 4 4 4 0 Kelch motif DUF1325 PF07039.11 RKO91592.1 - 1.5e-08 34.8 0.0 5.4e-08 33.0 0.0 2.0 1 0 0 1 1 1 1 SGF29 tudor-like domain PCO_ADO PF07847.12 RKO91594.1 - 7.6e-37 126.7 0.0 1.5e-35 122.5 0.0 2.0 2 0 0 2 2 2 1 PCO_ADO CDO_I PF05995.12 RKO91594.1 - 0.015 14.6 0.0 0.023 14.0 0.0 1.3 1 0 0 1 1 1 0 Cysteine dioxygenase type I Mito_carr PF00153.27 RKO91595.1 - 1.8e-46 156.0 2.6 9.1e-23 80.0 0.1 3.2 3 0 0 3 3 3 3 Mitochondrial carrier protein DUF630 PF04783.12 RKO91596.1 - 0.047 13.9 0.2 0.17 12.1 0.2 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF630) ABC_tran PF00005.27 RKO91597.1 - 4.1e-25 88.9 0.0 5.8e-25 88.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter ABC2_membrane PF01061.24 RKO91597.1 - 1.5e-11 44.1 14.8 1.5e-11 44.1 14.8 1.7 2 0 0 2 2 2 1 ABC-2 type transporter AAA_16 PF13191.6 RKO91597.1 - 0.00011 22.6 0.0 0.00021 21.7 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 RKO91597.1 - 0.00052 20.3 0.0 0.006 16.9 0.1 2.5 2 1 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 RKO91597.1 - 0.00058 19.8 0.0 0.00095 19.1 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 RKO91597.1 - 0.023 14.4 0.0 0.044 13.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 RKO91597.1 - 0.028 14.8 0.1 0.13 12.7 0.1 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 RKO91597.1 - 0.056 13.4 0.5 1.4 8.9 0.1 2.5 3 0 0 3 3 3 0 NACHT domain AAA_24 PF13479.6 RKO91597.1 - 0.075 12.7 0.2 0.14 11.8 0.2 1.4 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 RKO91597.1 - 0.12 12.5 0.2 0.2 11.8 0.2 1.2 1 0 0 1 1 1 0 Helicase HerA, central domain RecA PF00154.21 RKO91597.1 - 0.16 11.5 0.0 0.25 10.8 0.0 1.3 1 0 0 1 1 1 0 recA bacterial DNA recombination protein AAA_29 PF13555.6 RKO91597.1 - 0.17 11.7 0.3 0.36 10.6 0.3 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_18 PF13238.6 RKO91597.1 - 0.19 12.3 0.0 0.39 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 RKO91597.1 - 0.19 11.4 0.3 0.34 10.7 0.3 1.4 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein ABC2_membrane_3 PF12698.7 RKO91597.1 - 2.6 7.0 21.2 0.74 8.9 16.5 2.2 2 1 1 3 3 3 0 ABC-2 family transporter protein Helicase_C PF00271.31 RKO91598.1 - 5.4e-19 68.6 0.0 1.1e-18 67.6 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 RKO91598.1 - 8.3e-19 68.0 0.0 2e-18 66.8 0.0 1.6 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 RKO91598.1 - 0.00043 20.3 0.0 0.00077 19.5 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C_2 PF13307.6 RKO91598.1 - 0.1 12.7 0.0 0.19 11.9 0.0 1.4 1 0 0 1 1 1 0 Helicase C-terminal domain HEM4 PF02602.15 RKO91598.1 - 0.12 11.7 0.0 0.23 10.8 0.0 1.5 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD LRR_8 PF13855.6 RKO91599.1 - 1.5e-05 24.7 0.6 0.023 14.4 0.0 3.4 2 1 0 3 3 3 1 Leucine rich repeat LRR_6 PF13516.6 RKO91599.1 - 2.2e-05 24.2 3.7 0.59 10.3 0.0 4.9 5 1 0 5 5 5 2 Leucine Rich repeat LRR_4 PF12799.7 RKO91599.1 - 7.8e-05 23.0 0.2 0.58 10.7 0.0 3.0 3 0 0 3 3 3 2 Leucine Rich repeats (2 copies) Adeno_PIX PF03955.14 RKO91599.1 - 0.01 16.0 0.6 0.024 14.8 0.5 1.6 1 1 0 1 1 1 0 Adenovirus hexon-associated protein (IX) RIX1 PF08167.12 RKO91599.1 - 0.048 13.4 0.2 0.087 12.6 0.2 1.3 1 0 0 1 1 1 0 rRNA processing/ribosome biogenesis LRR_1 PF00560.33 RKO91599.1 - 0.35 11.6 4.5 23 6.1 0.0 4.8 5 2 0 5 5 5 0 Leucine Rich Repeat F-box-like PF12937.7 RKO91600.1 - 1.4e-06 28.1 2.5 3.5e-06 26.8 2.5 1.7 1 0 0 1 1 1 1 F-box-like DUF1153 PF06627.11 RKO91600.1 - 0.24 11.5 2.0 18 5.5 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1153) PAP2 PF01569.21 RKO91601.1 - 5.4e-17 61.8 2.6 5.4e-17 61.8 2.6 1.5 2 0 0 2 2 2 1 PAP2 superfamily G-gamma PF00631.22 RKO91602.1 - 3e-11 43.2 0.0 3.2e-11 43.1 0.0 1.1 1 0 0 1 1 1 1 GGL domain zf-C2H2 PF00096.26 RKO91603.1 - 8.8e-09 35.4 11.2 0.00012 22.4 2.7 2.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO91603.1 - 1.3e-06 28.8 8.5 0.00029 21.4 1.4 2.4 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_6 PF13912.6 RKO91603.1 - 0.0067 16.4 0.4 0.0067 16.4 0.4 1.7 2 0 0 2 2 2 1 C2H2-type zinc finger ADK_lid PF05191.14 RKO91603.1 - 0.15 12.0 6.7 1.2 9.1 0.4 3.3 3 0 0 3 3 3 0 Adenylate kinase, active site lid zf-C2HC_2 PF13913.6 RKO91603.1 - 3.4 7.7 7.6 0.59 10.1 0.8 2.7 2 1 1 3 3 3 0 zinc-finger of a C2HC-type zf-H2C2_2 PF13465.6 RKO91603.1 - 6.5 7.4 11.5 0.89 10.1 0.8 3.2 3 0 0 3 3 3 0 Zinc-finger double domain zf-MYND PF01753.18 RKO91607.1 - 0.00022 21.2 4.9 0.00082 19.4 4.9 2.0 1 0 0 1 1 1 1 MYND finger Spt20 PF12090.8 RKO91608.1 - 0.092 12.3 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Spt20 family Paf67 PF10255.9 RKO91609.1 - 3.3e-172 573.0 0.3 4.1e-172 572.7 0.3 1.1 1 0 0 1 1 1 1 RNA polymerase I-associated factor PAF67 TPR_2 PF07719.17 RKO91609.1 - 0.014 15.5 0.0 0.098 12.8 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 RKO91609.1 - 0.049 13.5 0.0 0.28 11.1 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF2428 PF10350.9 RKO91609.1 - 0.12 11.6 0.1 6.9 5.8 0.0 2.4 1 1 1 2 2 2 0 Putative death-receptor fusion protein (DUF2428) DUF4820 PF16091.5 RKO91615.1 - 0.023 14.1 1.0 0.038 13.4 1.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) DNA_pol_phi PF04931.13 RKO91615.1 - 0.68 8.0 7.3 1.1 7.3 7.3 1.2 1 0 0 1 1 1 0 DNA polymerase phi TFIIA PF03153.13 RKO91615.1 - 3.1 7.7 9.1 0.35 10.8 2.2 2.2 2 0 0 2 2 2 0 Transcription factor IIA, alpha/beta subunit Pox_Ag35 PF03286.14 RKO91615.1 - 4.6 7.0 8.1 4.6 7.0 5.4 2.3 2 0 0 2 2 2 0 Pox virus Ag35 surface protein Glyco_transf_20 PF00982.21 RKO91617.1 - 8.8e-158 525.9 0.0 1.2e-157 525.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 20 Trehalose_PPase PF02358.16 RKO91617.1 - 9.6e-77 257.2 0.0 1.5e-76 256.6 0.0 1.2 1 0 0 1 1 1 1 Trehalose-phosphatase Hydrolase_3 PF08282.12 RKO91617.1 - 4.4e-05 23.3 0.0 0.095 12.4 0.0 2.2 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Exo_endo_phos PF03372.23 RKO91618.1 - 7.7e-21 74.7 0.0 1e-20 74.2 0.0 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 RKO91618.1 - 0.0035 17.2 0.0 0.059 13.2 0.0 2.2 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase Peptidase_C2 PF00648.21 RKO91619.1 - 4.6e-56 190.0 0.5 6.3e-56 189.6 0.5 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease Fez1 PF06818.15 RKO91619.1 - 0.18 12.3 0.6 0.46 10.9 0.1 1.8 2 0 0 2 2 2 0 Fez1 UMPH-1 PF05822.12 RKO91621.1 - 5e-54 183.4 0.0 6.6e-54 183.0 0.0 1.1 1 0 0 1 1 1 1 Pyrimidine 5'-nucleotidase (UMPH-1) HAD PF12710.7 RKO91621.1 - 0.00051 20.5 0.1 0.0012 19.3 0.1 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase UPF0257 PF06788.13 RKO91621.1 - 0.028 14.3 0.0 0.043 13.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0257) DUF2076 PF09849.9 RKO91622.1 - 0.077 13.0 0.3 0.077 13.0 0.3 2.9 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2076) DUF4407 PF14362.6 RKO91622.1 - 0.21 10.9 0.0 0.32 10.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Cullin PF00888.22 RKO91623.1 - 1.6e-178 595.2 9.2 2.1e-178 594.8 9.2 1.1 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 RKO91623.1 - 1.7e-24 85.6 0.2 5.4e-24 84.0 0.2 1.9 1 0 0 1 1 1 1 Cullin protein neddylation domain DEC-1_N PF04625.13 RKO91623.1 - 0.018 14.1 0.0 0.033 13.2 0.0 1.4 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region DMSP_lyase PF16867.5 RKO91623.1 - 0.22 11.2 0.6 0.48 10.1 0.1 1.8 2 0 0 2 2 2 0 Dimethlysulfonioproprionate lyase FliL PF03748.14 RKO91623.1 - 2.2 8.9 4.9 25 5.5 0.4 2.7 2 0 0 2 2 2 0 Flagellar basal body-associated protein FliL SH3_1 PF00018.28 RKO91624.1 - 2.2e-08 33.6 0.0 3.4e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 SH3 domain SH3_9 PF14604.6 RKO91624.1 - 1.5e-07 31.1 0.0 2.5e-07 30.5 0.0 1.3 1 0 0 1 1 1 1 Variant SH3 domain SH3_2 PF07653.17 RKO91624.1 - 0.00029 20.4 0.0 0.00053 19.6 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain Miga PF10265.9 RKO91624.1 - 0.45 9.4 8.7 0.66 8.9 8.7 1.2 1 0 0 1 1 1 0 Mitoguardin Macoilin PF09726.9 RKO91624.1 - 3.5 6.1 7.0 4.7 5.7 7.0 1.2 1 0 0 1 1 1 0 Macoilin family Rrn6 PF10214.9 RKO91624.1 - 4.4 5.7 15.1 6.7 5.1 15.1 1.2 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor NST1 PF13945.6 RKO91624.1 - 4.7 7.3 7.1 7.8 6.6 7.1 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator Apt1 PF10351.9 RKO91624.1 - 5.2 5.8 8.7 7.3 5.3 8.7 1.2 1 0 0 1 1 1 0 Golgi-body localisation protein domain MAP65_ASE1 PF03999.12 RKO91624.1 - 5.5 5.6 7.8 8.1 5.0 7.8 1.2 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) Myosin_head PF00063.21 RKO91625.1 - 2.5e-11 42.5 0.0 3.6e-11 42.0 0.0 1.2 1 0 0 1 1 1 1 Myosin head (motor domain) Pap_E4 PF02711.14 RKO91625.1 - 3.2 8.8 9.1 0.35 11.9 1.4 2.6 3 0 0 3 3 3 0 E4 protein EF1G PF00647.19 RKO91630.1 - 0.0033 17.5 1.0 0.015 15.3 0.1 2.0 1 1 1 2 2 2 1 Elongation factor 1 gamma, conserved domain Cbl_N2 PF02761.14 RKO91631.1 - 0.086 13.6 0.0 5.6 7.7 0.0 2.3 2 0 0 2 2 2 0 CBL proto-oncogene N-terminus, EF hand-like domain Cbl_N2 PF02761.14 RKO91632.1 - 0.015 16.0 0.0 22 5.9 0.0 3.6 3 0 0 3 3 3 0 CBL proto-oncogene N-terminus, EF hand-like domain F-box PF00646.33 RKO91633.1 - 0.011 15.6 0.2 5.8 6.9 0.1 2.6 2 0 0 2 2 2 0 F-box domain F-box-like PF12937.7 RKO91633.1 - 0.015 15.2 1.1 1 9.3 0.2 3.0 3 0 0 3 3 3 0 F-box-like F-box_5 PF18511.1 RKO91633.1 - 0.12 11.9 0.6 0.46 10.1 0.3 2.0 2 0 0 2 2 2 0 F-box Polbeta PF18765.1 RKO91633.1 - 0.19 11.8 0.0 13 5.9 0.0 2.3 2 0 0 2 2 2 0 Polymerase beta, Nucleotidyltransferase DAO PF01266.24 RKO91634.1 - 5.7e-09 36.0 0.0 6e-09 36.0 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase PCI PF01399.27 RKO91635.1 - 3.3e-10 40.4 1.4 1.4e-09 38.4 0.2 2.8 2 0 0 2 2 2 1 PCI domain HHH_5 PF14520.6 RKO91636.1 - 1.9e-06 28.4 1.9 2.3e-06 28.1 0.9 1.7 1 1 1 2 2 2 1 Helix-hairpin-helix domain HlyD_D4 PF16572.5 RKO91636.1 - 0.013 15.3 0.2 4.2 7.3 0.1 2.2 2 0 0 2 2 2 0 Long alpha hairpin domain of cation efflux system protein, CusB HHH_3 PF12836.7 RKO91636.1 - 0.081 13.2 0.1 0.32 11.3 0.1 1.9 1 1 1 2 2 2 0 Helix-hairpin-helix motif MerR_1 PF13411.6 RKO91636.1 - 0.12 12.4 0.7 3 8.0 0.0 2.3 2 0 0 2 2 2 0 MerR HTH family regulatory protein AARP2CN PF08142.12 RKO91636.1 - 0.13 12.4 0.1 0.87 9.7 0.1 2.0 1 1 1 2 2 2 0 AARP2CN (NUC121) domain PPR_2 PF13041.6 RKO91638.1 - 3.9e-16 59.0 0.0 4.1e-06 26.9 0.0 4.9 5 1 1 6 6 6 2 PPR repeat family PPR_3 PF13812.6 RKO91638.1 - 7.9e-14 51.5 0.0 5.6e-05 23.1 0.0 5.8 4 1 3 7 7 7 3 Pentatricopeptide repeat domain PPR PF01535.20 RKO91638.1 - 7.4e-12 44.7 0.0 0.0067 16.6 0.0 6.1 6 0 0 6 6 6 3 PPR repeat PPR_long PF17177.4 RKO91638.1 - 1.7e-07 30.8 4.7 2.3e-06 27.1 0.0 3.2 2 1 1 3 3 3 1 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 RKO91638.1 - 2.5e-06 27.1 0.0 0.031 14.0 0.0 4.5 5 0 0 5 5 5 2 PPR repeat ATP13 PF12921.7 RKO91638.1 - 0.02 14.7 0.0 0.53 10.2 0.0 2.9 1 1 1 3 3 3 0 Mitochondrial ATPase expression ParB_C PF18064.1 RKO91638.1 - 0.081 13.1 0.2 0.75 10.0 0.1 2.5 3 0 0 3 3 3 0 Centromere-binding protein ParB C-terminal SpoVT_C PF15714.5 RKO91638.1 - 0.15 12.1 0.0 0.33 11.0 0.0 1.6 1 0 0 1 1 1 0 Stage V sporulation protein T C-terminal, transcription factor Kelch_6 PF13964.6 RKO91643.1 - 1.4e-11 44.2 6.8 7.4e-06 26.1 0.1 4.1 2 1 1 3 3 3 3 Kelch motif Kelch_4 PF13418.6 RKO91643.1 - 8.2e-09 35.3 7.8 0.00026 20.9 0.0 4.9 4 1 0 4 4 4 3 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO91643.1 - 1.2e-07 31.2 0.7 4.1e-05 23.1 0.0 3.6 3 0 0 3 3 3 1 Kelch motif Kelch_2 PF07646.15 RKO91643.1 - 1.8e-06 27.7 7.6 0.022 14.7 0.0 5.3 5 0 0 5 5 5 2 Kelch motif Kelch_5 PF13854.6 RKO91643.1 - 2.9e-05 23.9 0.3 0.12 12.4 0.0 3.7 2 1 1 3 3 3 2 Kelch motif Kelch_3 PF13415.6 RKO91643.1 - 0.11 12.8 0.0 0.11 12.8 0.0 5.7 5 2 1 6 6 6 0 Galactose oxidase, central domain HTH_Tnp_4 PF13613.6 RKO91644.1 - 0.0038 16.9 0.0 0.005 16.5 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix of DDE superfamily endonuclease Tcp11 PF05794.13 RKO91645.1 - 7.2e-82 275.8 1.9 8.1e-82 275.7 1.9 1.0 1 0 0 1 1 1 1 T-complex protein 11 DUF668 PF05003.12 RKO91645.1 - 0.025 15.0 0.1 0.091 13.2 0.1 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF668) Stathmin PF00836.19 RKO91646.1 - 0.72 9.8 12.4 0.063 13.2 6.4 2.1 2 1 1 3 3 3 0 Stathmin family Pkinase PF00069.25 RKO91647.1 - 2.4e-40 138.6 0.1 1.1e-39 136.4 0.1 1.8 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91647.1 - 3.2e-19 69.2 0.2 1.2e-18 67.4 0.2 1.7 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO91647.1 - 0.24 10.7 0.0 4.4 6.5 0.0 2.1 2 0 0 2 2 2 0 Kinase-like PRKCSH-like PF12999.7 RKO91650.1 - 1.1e-41 142.5 0.7 1.1e-41 142.5 0.7 1.9 2 0 0 2 2 2 1 Glucosidase II beta subunit-like PRKCSH PF07915.13 RKO91650.1 - 0.0005 21.0 0.0 0.0012 19.8 0.0 1.7 1 0 0 1 1 1 1 Glucosidase II beta subunit-like protein PRKCSH_1 PF13015.6 RKO91650.1 - 0.0009 19.0 0.0 0.0025 17.5 0.0 1.8 1 0 0 1 1 1 1 Glucosidase II beta subunit-like protein Ldl_recept_a PF00057.18 RKO91650.1 - 0.016 15.4 1.3 0.016 15.4 1.3 2.8 1 1 1 2 2 2 0 Low-density lipoprotein receptor domain class A Halogen_Hydrol PF10112.9 RKO91650.1 - 0.063 13.3 0.1 0.14 12.2 0.1 1.5 1 0 0 1 1 1 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein Fez1 PF06818.15 RKO91650.1 - 0.65 10.4 14.2 1.5 9.3 14.2 1.5 1 1 0 1 1 1 0 Fez1 YgaB PF14182.6 RKO91650.1 - 8.6 6.8 11.4 3.8 8.0 0.3 2.9 2 1 1 3 3 3 0 YgaB-like protein SET PF00856.28 RKO91651.1 - 3.2e-09 37.4 0.0 7.9e-08 32.9 0.0 2.4 2 0 0 2 2 2 1 SET domain His_Phos_2 PF00328.22 RKO91652.1 - 4.7e-15 55.8 0.0 6e-15 55.5 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) HLH PF00010.26 RKO91654.1 - 9e-07 28.8 1.0 1.4e-06 28.2 1.0 1.3 1 0 0 1 1 1 1 Helix-loop-helix DNA-binding domain DUF1582 PF07621.11 RKO91654.1 - 0.0086 16.0 0.2 0.026 14.4 0.2 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1582) DEAD PF00270.29 RKO91655.1 - 1.6e-37 129.0 0.0 2.4e-37 128.4 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO91655.1 - 2.3e-19 69.8 0.0 1.4e-18 67.3 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO91655.1 - 1.2e-06 28.7 0.0 1.8e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 RKO91655.1 - 0.0003 20.1 0.0 0.00043 19.6 0.0 1.1 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase AAA_22 PF13401.6 RKO91655.1 - 0.019 15.2 0.0 0.074 13.3 0.0 1.9 2 1 0 2 2 2 0 AAA domain Sas10_Utp3 PF04000.15 RKO91656.1 - 0.0051 17.4 0.0 0.0073 16.9 0.0 1.2 1 0 0 1 1 1 1 Sas10/Utp3/C1D family Homeodomain PF00046.29 RKO91658.1 - 0.051 13.4 0.2 0.11 12.4 0.2 1.5 1 0 0 1 1 1 0 Homeodomain Utp11 PF03998.13 RKO91661.1 - 3.8e-80 269.4 18.5 4.3e-80 269.2 18.5 1.0 1 0 0 1 1 1 1 Utp11 protein SLATT_5 PF18160.1 RKO91661.1 - 0.013 14.8 0.1 0.029 13.7 0.1 1.5 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 ABC_tran PF00005.27 RKO91663.1 - 5.4e-48 163.0 0.0 2.2e-23 83.3 0.0 3.8 2 2 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 RKO91663.1 - 2.6e-14 53.7 0.0 0.004 17.0 0.0 4.2 3 1 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 RKO91663.1 - 7.6e-11 41.9 0.1 0.46 9.9 0.0 4.3 4 0 0 4 4 4 4 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 RKO91663.1 - 4.8e-08 33.7 2.5 0.0026 18.3 0.0 3.0 2 1 0 2 2 2 2 AAA domain AAA_29 PF13555.6 RKO91663.1 - 3.9e-07 29.7 0.0 0.017 14.9 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain HEAT_2 PF13646.6 RKO91663.1 - 7.8e-07 29.4 3.3 0.0065 16.8 0.0 4.4 2 1 3 5 5 5 2 HEAT repeats RsgA_GTPase PF03193.16 RKO91663.1 - 3.4e-06 27.1 0.0 0.035 14.0 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_18 PF13238.6 RKO91663.1 - 4.5e-06 27.2 0.0 0.1 13.2 0.0 2.9 2 0 0 2 2 2 2 AAA domain AAA_28 PF13521.6 RKO91663.1 - 4.7e-06 26.9 0.0 0.11 12.8 0.0 2.6 2 0 0 2 2 2 2 AAA domain MMR_HSR1 PF01926.23 RKO91663.1 - 1.4e-05 25.1 0.0 0.16 12.1 0.0 3.3 3 0 0 3 3 3 2 50S ribosome-binding GTPase AAA_33 PF13671.6 RKO91663.1 - 2.3e-05 24.6 0.1 0.96 9.6 0.0 3.5 3 0 0 3 3 3 2 AAA domain AAA_22 PF13401.6 RKO91663.1 - 2.9e-05 24.4 0.1 0.35 11.2 0.0 3.5 3 1 0 3 3 2 2 AAA domain HEAT PF02985.22 RKO91663.1 - 3.2e-05 23.8 0.2 1.2 9.6 0.0 4.8 4 0 0 4 4 4 1 HEAT repeat AAA_27 PF13514.6 RKO91663.1 - 6.3e-05 22.7 0.0 0.091 12.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_30 PF13604.6 RKO91663.1 - 0.00012 21.8 2.1 1.1 8.9 0.0 4.0 4 1 0 4 4 4 2 AAA domain AAA_15 PF13175.6 RKO91663.1 - 0.00015 21.6 0.2 0.76 9.4 0.0 2.9 3 1 0 4 4 3 2 AAA ATPase domain MeaB PF03308.16 RKO91663.1 - 0.00019 20.5 0.1 0.28 10.1 0.0 2.4 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA PF00004.29 RKO91663.1 - 0.00019 21.8 0.0 0.26 11.7 0.0 2.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 RKO91663.1 - 0.00024 21.5 0.0 1.5 9.2 0.0 3.0 3 0 0 3 3 2 2 RNA helicase HEAT_EZ PF13513.6 RKO91663.1 - 0.00032 21.1 11.0 0.22 12.1 0.0 5.6 6 0 0 6 6 4 1 HEAT-like repeat CLASP_N PF12348.8 RKO91663.1 - 0.00054 19.6 0.0 0.0043 16.7 0.0 2.1 2 0 0 2 2 2 1 CLASP N terminal SbcCD_C PF13558.6 RKO91663.1 - 0.00085 19.5 0.0 1.5 9.1 0.0 3.5 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit DUF87 PF01935.17 RKO91663.1 - 0.002 18.3 0.1 0.22 11.6 0.0 3.3 4 0 0 4 4 2 1 Helicase HerA, central domain AAA_16 PF13191.6 RKO91663.1 - 0.003 18.0 0.0 4.4 7.7 0.0 3.2 3 0 0 3 3 3 1 AAA ATPase domain Rad17 PF03215.15 RKO91663.1 - 0.0034 17.3 0.0 0.56 10.1 0.0 2.4 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_24 PF13479.6 RKO91663.1 - 0.0037 17.0 0.1 1.9 8.1 0.1 2.8 3 0 0 3 3 2 1 AAA domain NACHT PF05729.12 RKO91663.1 - 0.0049 16.8 0.1 0.32 10.9 0.0 2.6 2 0 0 2 2 2 1 NACHT domain Chromo PF00385.24 RKO91663.1 - 0.013 15.4 3.6 0.03 14.2 3.6 1.6 1 0 0 1 1 1 0 Chromo (CHRromatin Organisation MOdifier) domain AAA_7 PF12775.7 RKO91663.1 - 0.021 14.3 0.0 4.7 6.7 0.0 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region 4HB PF17947.1 RKO91663.1 - 0.023 14.8 0.0 0.085 12.9 0.0 2.1 1 0 0 1 1 1 0 Four helical bundle domain DUF815 PF05673.13 RKO91663.1 - 0.04 13.1 0.0 4.3 6.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) Dynamin_N PF00350.23 RKO91663.1 - 0.048 13.7 0.3 1.6 8.7 0.0 3.0 3 0 0 3 3 3 0 Dynamin family Cytidylate_kin PF02224.18 RKO91663.1 - 0.051 13.3 0.0 9.5 5.9 0.1 2.6 2 0 0 2 2 2 0 Cytidylate kinase AAA_14 PF13173.6 RKO91663.1 - 0.059 13.4 0.0 5 7.2 0.0 2.9 2 0 0 2 2 2 0 AAA domain UME PF08064.13 RKO91663.1 - 0.069 13.1 0.1 0.25 11.3 0.1 1.9 1 0 0 1 1 1 0 UME (NUC010) domain CLP1_P PF16575.5 RKO91663.1 - 0.1 12.4 0.0 14 5.4 0.0 2.8 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop ATP_bind_1 PF03029.17 RKO91663.1 - 0.14 11.9 0.1 18 5.0 0.0 2.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein TsaE PF02367.17 RKO91663.1 - 0.15 12.1 0.2 7.3 6.6 0.1 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE MutS_V PF00488.21 RKO91663.1 - 0.17 11.9 0.1 4.7 7.2 0.0 2.6 2 0 0 2 2 2 0 MutS domain V Kinesin PF00225.23 RKO91664.1 - 7.8e-37 126.9 1.0 9.4e-37 126.7 0.3 1.4 2 0 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 RKO91664.1 - 3.8e-19 69.1 0.2 3.8e-19 69.1 0.2 2.0 3 0 0 3 3 3 1 Microtubule binding DUF3107 PF11305.8 RKO91664.1 - 0.049 13.9 0.1 9.7 6.5 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3107) RasGAP PF00616.19 RKO91665.1 - 5e-26 91.7 0.0 1.2e-18 67.6 0.0 2.2 1 1 1 2 2 2 2 GTPase-activator protein for Ras-like GTPase CRAL_TRIO_2 PF13716.6 RKO91665.1 - 2e-16 60.4 0.0 4.8e-16 59.2 0.0 1.6 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain MOR2-PAG1_C PF14225.6 RKO91665.1 - 0.023 14.6 0.0 0.068 13.0 0.0 1.8 1 0 0 1 1 1 0 Cell morphogenesis C-terminal Chor_lyase PF04345.13 RKO91665.1 - 0.11 12.1 0.0 0.27 10.9 0.0 1.6 1 0 0 1 1 1 0 Chorismate lyase LON_substr_bdg PF02190.16 RKO91666.1 - 1e-11 45.1 0.0 1.7e-11 44.4 0.0 1.3 1 1 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain SR-25 PF10500.9 RKO91666.1 - 0.53 9.9 8.1 0.71 9.4 8.1 1.1 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein PRRSV_2b PF07069.11 RKO91670.1 - 1.2 9.7 8.3 3 8.4 8.3 1.6 1 0 0 1 1 1 0 Porcine reproductive and respiratory syndrome virus 2b SBP_bac_6 PF13343.6 RKO91671.1 - 0.052 13.0 0.1 5.8 6.2 0.1 2.3 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein Vps39_2 PF10367.9 RKO91671.1 - 0.088 13.3 0.9 3 8.3 0.0 2.5 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 PHD20L1_u1 PF16660.5 RKO91671.1 - 0.14 12.9 3.4 0.21 12.4 1.6 2.1 2 0 0 2 2 2 0 PHD finger protein 20-like protein 1 CPSase_L_D2 PF02786.17 RKO91674.1 - 1.7e-79 266.2 0.1 2.6e-79 265.6 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 RKO91674.1 - 1.4e-43 147.9 0.1 3.3e-43 146.7 0.1 1.7 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 RKO91674.1 - 1.7e-33 115.0 0.0 7.9e-33 112.8 0.0 2.2 2 0 0 2 2 2 1 Biotin carboxylase C-terminal domain PCC_BT PF18140.1 RKO91674.1 - 2.5e-27 95.7 0.0 5.3e-27 94.7 0.0 1.6 1 0 0 1 1 1 1 Propionyl-coenzyme A carboxylase BT domain Dala_Dala_lig_C PF07478.13 RKO91674.1 - 3.4e-09 36.6 0.2 1.8e-08 34.2 0.0 2.2 2 1 1 3 3 3 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 RKO91674.1 - 5.7e-09 35.8 0.0 1.3e-08 34.6 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 RKO91674.1 - 0.0028 17.7 0.0 0.0061 16.6 0.0 1.7 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 RKO91674.1 - 0.0078 16.0 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Biotin_lipoyl_2 PF13533.6 RKO91674.1 - 0.02 14.7 0.0 0.069 13.0 0.0 1.9 2 0 0 2 2 2 0 Biotin-lipoyl like ATP-grasp_5 PF13549.6 RKO91674.1 - 0.049 13.1 0.1 0.1 12.0 0.1 1.5 1 0 0 1 1 1 0 ATP-grasp domain Carboxyl_trans PF01039.22 RKO91675.1 - 6.9e-186 618.7 0.2 3.6e-185 616.3 0.2 1.8 1 1 0 1 1 1 1 Carboxyl transferase domain UBX PF00789.20 RKO91676.1 - 8.7e-16 57.9 0.0 1.8e-15 56.9 0.0 1.5 1 0 0 1 1 1 1 UBX domain DUF3818 PF12825.7 RKO91676.1 - 0.051 12.6 9.9 0.084 11.9 9.9 1.3 1 0 0 1 1 1 0 Domain of unknown function in PX-proteins (DUF3818) zf-RING_7 PF02591.15 RKO91676.1 - 0.11 12.7 0.1 0.39 10.9 0.0 2.0 2 0 0 2 2 2 0 C4-type zinc ribbon domain Peptidase_U57 PF05582.12 RKO91676.1 - 0.22 10.7 5.7 0.31 10.2 5.7 1.2 1 0 0 1 1 1 0 YabG peptidase U57 V_ATPase_I PF01496.19 RKO91676.1 - 1.3 6.9 8.5 1.6 6.5 8.5 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family MCM3AP_GANP PF16769.5 RKO91676.1 - 4.4 5.4 10.0 8.5 4.5 9.2 1.8 2 0 0 2 2 2 0 MCM3AP domain of GANP DUF900 PF05990.12 RKO91677.1 - 2.3e-13 50.2 0.0 1.2e-12 47.9 0.0 1.9 1 1 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) Abhydrolase_1 PF00561.20 RKO91677.1 - 0.0051 16.5 0.2 0.0085 15.8 0.2 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold AA_permease PF00324.21 RKO91678.1 - 6.1e-124 414.2 47.4 7.2e-124 414.0 47.4 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 RKO91678.1 - 1.7e-43 149.0 53.2 2.1e-43 148.8 53.2 1.0 1 0 0 1 1 1 1 Amino acid permease NIF PF03031.18 RKO91679.1 - 4.8e-16 58.9 0.0 1.8e-15 57.1 0.0 1.8 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase RPGR1_C PF18111.1 RKO91680.1 - 1.7e-09 37.8 0.0 3.1e-09 37.0 0.0 1.3 1 0 0 1 1 1 1 Retinitis pigmentosa G-protein regulator interacting C-terminal C2 PF00168.30 RKO91680.1 - 0.00015 22.0 0.0 0.00031 21.0 0.0 1.6 1 0 0 1 1 1 1 C2 domain C2-C2_1 PF11618.8 RKO91680.1 - 0.014 15.5 0.1 0.11 12.5 0.0 2.4 2 1 0 2 2 2 0 First C2 domain of RPGR-interacting protein 1 Gln_deamidase_2 PF18626.1 RKO91684.1 - 0.039 14.2 0.0 0.066 13.5 0.0 1.3 1 0 0 1 1 1 0 Glutaminase LRR_4 PF12799.7 RKO91685.1 - 0.04 14.3 7.3 15 6.2 1.9 4.6 4 1 1 5 5 5 0 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO91685.1 - 1.1 9.1 4.3 69 3.3 1.1 4.3 4 1 0 4 4 4 0 Leucine rich repeat F-box-like PF12937.7 RKO91686.1 - 0.028 14.3 0.2 0.29 11.1 0.0 2.6 3 0 0 3 3 3 0 F-box-like Calreticulin PF00262.18 RKO91687.1 - 1.6e-166 553.7 6.6 1.8e-166 553.5 6.6 1.0 1 0 0 1 1 1 1 Calreticulin family Herpes_LMP1 PF05297.11 RKO91687.1 - 6.3 5.9 8.4 9 5.4 8.4 1.1 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) DEAD PF00270.29 RKO91690.1 - 4.8e-31 107.9 0.0 1.1e-30 106.7 0.0 1.7 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO91690.1 - 8.6e-21 74.4 0.0 1.6e-19 70.3 0.0 2.5 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO91690.1 - 0.00042 20.4 0.1 1.3 9.0 0.0 2.5 2 1 1 3 3 3 2 Type III restriction enzyme, res subunit SNF2_N PF00176.23 RKO91690.1 - 0.00075 18.3 0.0 0.0011 17.8 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Herpes_ori_bp PF02399.15 RKO91690.1 - 0.0021 16.2 0.1 0.0029 15.7 0.1 1.2 1 0 0 1 1 1 1 Origin of replication binding protein AAA_22 PF13401.6 RKO91690.1 - 0.03 14.6 1.7 0.62 10.3 1.0 2.7 2 1 0 2 2 2 0 AAA domain MMS19_N PF14500.6 RKO91690.1 - 0.11 12.1 0.0 0.24 11.0 0.0 1.6 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II DUF572 PF04502.13 RKO91691.1 - 0.36 10.4 26.5 0.019 14.6 19.0 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF572) AUX_IAA PF02309.16 RKO91691.1 - 1.5 8.7 13.7 1.4e+02 2.1 0.0 2.9 1 1 1 2 2 2 0 AUX/IAA family Integrase_H2C2 PF17921.1 RKO91693.1 - 7.2e-11 42.0 0.0 1.3e-10 41.2 0.0 1.4 1 0 0 1 1 1 1 Integrase zinc binding domain zf-H2C2 PF09337.10 RKO91693.1 - 0.0013 18.9 0.0 0.0023 18.1 0.0 1.4 1 0 0 1 1 1 1 H2C2 zinc finger Herpes_LMP1 PF05297.11 RKO91694.1 - 0.0019 17.5 0.5 0.0026 17.0 0.5 1.1 1 0 0 1 1 1 1 Herpesvirus latent membrane protein 1 (LMP1) zf-C2H2 PF00096.26 RKO91699.1 - 4.6e-11 42.5 18.7 0.0039 17.6 1.5 4.3 4 0 0 4 4 4 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO91699.1 - 3.2e-07 30.6 17.0 0.4 11.7 1.1 4.4 4 0 0 4 4 4 4 C2H2-type zinc finger zf-C2H2_aberr PF17017.5 RKO91699.1 - 4e-06 27.1 5.6 0.0025 18.0 1.4 2.7 3 1 0 3 3 3 2 Aberrant zinc-finger zf-C2H2_11 PF16622.5 RKO91699.1 - 0.002 17.9 0.6 0.0039 16.9 0.6 1.5 1 0 0 1 1 1 1 zinc-finger C2H2-type IBR PF01485.21 RKO91699.1 - 0.041 14.1 2.1 0.22 11.8 0.0 2.5 2 1 1 3 3 3 0 IBR domain, a half RING-finger domain zf-C2H2_jaz PF12171.8 RKO91699.1 - 0.06 13.7 0.5 14 6.1 0.0 3.1 4 0 0 4 4 4 0 Zinc-finger double-stranded RNA-binding FOXP-CC PF16159.5 RKO91699.1 - 0.13 12.9 0.4 25 5.6 0.0 3.1 3 0 0 3 3 3 0 FOXP coiled-coil domain zf-met PF12874.7 RKO91699.1 - 0.17 12.3 2.3 0.27 11.7 0.5 2.2 2 0 0 2 2 2 0 Zinc-finger of C2H2 type zf-BED PF02892.15 RKO91699.1 - 0.27 11.3 2.7 13 5.9 0.0 3.5 4 0 0 4 4 4 0 BED zinc finger zf-C2H2_6 PF13912.6 RKO91699.1 - 0.35 10.9 8.4 0.56 10.3 0.8 2.6 2 0 0 2 2 2 0 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO91699.1 - 0.83 10.2 27.9 3.6 8.2 0.7 5.1 5 0 0 5 5 5 0 Zinc-finger double domain Aft1_OSA PF11785.8 RKO91700.1 - 0.00045 20.6 0.4 0.0011 19.4 0.4 1.7 1 0 0 1 1 1 1 Aft1 osmotic stress response (OSM) domain Pkinase PF00069.25 RKO91702.1 - 5.6e-62 209.5 0.1 6.3e-62 209.3 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91702.1 - 1.4e-37 129.4 0.0 1.6e-37 129.3 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO91702.1 - 5.6e-05 22.1 0.0 0.00011 21.2 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Seadorna_VP7 PF07387.11 RKO91702.1 - 0.0012 18.0 0.0 0.0018 17.4 0.0 1.2 1 0 0 1 1 1 1 Seadornavirus VP7 Kinase-like PF14531.6 RKO91702.1 - 0.0022 17.3 0.0 0.0052 16.2 0.0 1.6 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 RKO91702.1 - 0.016 15.2 0.0 0.037 14.0 0.0 1.5 2 0 0 2 2 2 0 Phosphotransferase enzyme family RIO1 PF01163.22 RKO91702.1 - 0.04 13.5 0.3 0.068 12.8 0.0 1.5 2 0 0 2 2 2 0 RIO1 family Haspin_kinase PF12330.8 RKO91702.1 - 0.058 12.3 0.1 0.079 11.9 0.1 1.5 1 1 0 1 1 1 0 Haspin like kinase domain ECF_trnsprt PF12822.7 RKO91702.1 - 0.082 13.0 0.0 0.14 12.3 0.0 1.3 1 1 0 1 1 1 0 ECF transporter, substrate-specific component Abhydrolase_3 PF07859.13 RKO91703.1 - 5.1e-15 55.9 0.4 1.5e-14 54.4 0.5 1.8 1 1 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 RKO91703.1 - 3.7e-10 39.3 0.4 2e-09 36.9 0.4 1.8 1 1 0 1 1 1 1 Carboxylesterase family Pkinase PF00069.25 RKO91704.1 - 1.1e-36 126.6 0.0 1.4e-36 126.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91704.1 - 3.7e-15 55.9 0.0 4.8e-15 55.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_C PF00433.24 RKO91704.1 - 1.5e-13 51.2 4.2 2.5e-13 50.5 4.2 1.3 1 0 0 1 1 1 1 Protein kinase C terminal domain Haspin_kinase PF12330.8 RKO91704.1 - 0.0042 16.1 0.0 0.0058 15.6 0.0 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 RKO91704.1 - 0.061 12.6 0.0 0.076 12.3 0.0 1.1 1 0 0 1 1 1 0 Kinase-like PMM PF03332.13 RKO91705.1 - 1.5e-108 361.7 0.5 1.7e-108 361.5 0.5 1.0 1 0 0 1 1 1 1 Eukaryotic phosphomannomutase Hydrolase_3 PF08282.12 RKO91705.1 - 3.1e-06 27.1 0.0 8.2e-05 22.5 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 RKO91705.1 - 0.004 16.7 0.0 0.36 10.3 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 RKO91705.1 - 0.054 13.8 0.0 0.11 12.8 0.0 1.7 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 RKO91705.1 - 0.13 12.4 0.0 0.22 11.6 0.0 1.5 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Sec61_beta PF03911.16 RKO91706.1 - 7.2e-19 67.5 0.6 8.3e-19 67.3 0.6 1.1 1 0 0 1 1 1 1 Sec61beta family Bac_surface_Ag PF01103.23 RKO91707.1 - 6e-40 137.7 0.4 8e-40 137.3 0.4 1.1 1 0 0 1 1 1 1 Surface antigen POTRA PF07244.15 RKO91707.1 - 0.083 13.5 0.7 0.31 11.6 0.1 2.1 2 1 0 2 2 2 0 Surface antigen variable number repeat ADH_N PF08240.12 RKO91708.1 - 1.5e-08 34.5 0.0 2.4e-08 33.8 0.0 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 RKO91708.1 - 2.6e-06 27.4 0.0 2.1e-05 24.5 0.0 2.0 2 0 0 2 2 2 1 Zinc-binding dehydrogenase TrkA_N PF02254.18 RKO91708.1 - 0.11 12.7 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Ribosomal_L15e PF00827.17 RKO91711.1 - 3.7e-88 294.3 7.0 4.1e-88 294.1 7.0 1.0 1 0 0 1 1 1 1 Ribosomal L15 Trp_syntA PF00290.20 RKO91714.1 - 3.3e-80 268.7 0.0 4.6e-80 268.2 0.0 1.2 1 0 0 1 1 1 1 Tryptophan synthase alpha chain PALP PF00291.25 RKO91714.1 - 2.5e-42 145.3 0.3 4.2e-42 144.6 0.3 1.2 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme HSP20 PF00011.21 RKO91716.1 - 2.1e-13 50.3 0.2 2.3e-13 50.2 0.2 1.0 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 RKO91716.1 - 0.00037 20.0 0.0 0.0017 17.8 0.0 2.0 1 1 0 1 1 1 1 HSP20-like domain found in ArsA VTC PF09359.10 RKO91716.1 - 0.13 11.7 0.0 0.13 11.7 0.0 1.0 1 0 0 1 1 1 0 VTC domain DEAD PF00270.29 RKO91717.1 - 9.4e-49 165.5 0.0 1.6e-48 164.8 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO91717.1 - 1.2e-31 109.3 0.0 4.9e-31 107.3 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO91717.1 - 9.7e-06 25.7 0.0 1.6e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit CMS1 PF14617.6 RKO91717.1 - 0.012 15.0 0.2 0.083 12.2 0.0 2.0 2 0 0 2 2 2 0 U3-containing 90S pre-ribosomal complex subunit UTP25 PF06862.12 RKO91717.1 - 0.017 13.9 0.0 0.66 8.7 0.0 2.6 2 1 0 2 2 2 0 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 ERCC3_RAD25_C PF16203.5 RKO91717.1 - 0.02 14.1 0.0 0.034 13.4 0.0 1.3 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase BAG PF02179.16 RKO91718.1 - 0.0015 18.9 6.0 0.0034 17.8 0.3 2.8 2 1 0 2 2 2 1 BAG domain FtsL PF04999.13 RKO91718.1 - 0.029 14.3 0.0 0.054 13.5 0.0 1.4 1 0 0 1 1 1 0 Cell division protein FtsL UL42 PF17638.2 RKO91718.1 - 0.067 13.2 1.7 0.12 12.3 1.7 1.3 1 0 0 1 1 1 0 HCMV UL42 Zip PF02535.22 RKO91719.1 - 3.6e-20 72.4 11.7 4.9e-12 45.7 2.3 2.0 2 0 0 2 2 2 2 ZIP Zinc transporter USP7_ICP0_bdg PF12436.8 RKO91720.1 - 1.5e-61 207.8 0.0 1.5e-60 204.5 0.0 2.2 2 0 0 2 2 2 1 ICP0-binding domain of Ubiquitin-specific protease 7 USP7_C2 PF14533.6 RKO91720.1 - 4.4e-46 157.2 1.0 3.4e-44 151.0 0.1 3.0 3 0 0 3 3 3 1 Ubiquitin-specific protease C-terminal UCH PF00443.29 RKO91720.1 - 1.1e-44 152.8 0.1 2e-44 152.0 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 RKO91720.1 - 1.7e-20 73.8 0.0 3.8e-20 72.7 0.0 1.6 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase MATH PF00917.26 RKO91720.1 - 4.1e-10 39.8 0.0 9.7e-10 38.6 0.0 1.7 1 0 0 1 1 1 1 MATH domain ubiquitin PF00240.23 RKO91720.1 - 0.00045 19.9 0.0 0.0031 17.2 0.0 2.4 2 0 0 2 2 2 1 Ubiquitin family Trm5_N PF18093.1 RKO91720.1 - 0.011 15.6 1.6 0.02 14.8 0.4 2.0 2 0 0 2 2 2 0 tRNA methyltransferase 5 N-terminal domain FHA PF00498.26 RKO91721.1 - 1.1e-08 35.3 0.0 1.8e-08 34.6 0.0 1.4 1 0 0 1 1 1 1 FHA domain dsrm PF00035.26 RKO91721.1 - 2.7e-05 24.8 0.0 8.2e-05 23.2 0.0 1.9 2 0 0 2 2 2 1 Double-stranded RNA binding motif Dicer_dimer PF03368.14 RKO91721.1 - 0.0053 16.9 0.0 0.012 15.7 0.0 1.6 1 0 0 1 1 1 1 Dicer dimerisation domain DUF1465 PF07323.12 RKO91721.1 - 0.091 12.6 0.4 0.16 11.8 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) GCIP PF13324.6 RKO91721.1 - 4.1 6.9 8.9 0.14 11.7 1.5 1.9 1 1 1 2 2 2 0 Grap2 and cyclin-D-interacting DNA_pol_phi PF04931.13 RKO91721.1 - 4.7 5.2 7.6 6.2 4.8 7.6 1.0 1 0 0 1 1 1 0 DNA polymerase phi AAA_18 PF13238.6 RKO91722.1 - 1.3e-26 93.6 0.0 2e-26 93.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 RKO91722.1 - 2.9e-08 34.2 0.2 1.3e-07 32.1 0.0 2.0 1 1 1 2 2 2 1 AAA domain AAA_28 PF13521.6 RKO91722.1 - 0.0003 21.1 1.8 0.0006 20.1 1.8 1.7 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 RKO91722.1 - 0.00032 21.1 0.3 0.0013 19.1 0.0 2.1 2 1 1 3 3 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 RKO91722.1 - 0.001 19.2 0.5 0.02 15.0 0.4 2.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 RKO91722.1 - 0.0024 18.3 0.7 0.0042 17.5 0.7 1.8 1 1 0 1 1 1 1 AAA ATPase domain ADK PF00406.22 RKO91722.1 - 0.0027 17.8 0.6 0.032 14.4 0.0 2.3 2 1 0 2 2 2 1 Adenylate kinase dNK PF01712.19 RKO91722.1 - 0.0086 15.9 1.2 0.24 11.2 0.5 2.3 2 1 0 2 2 2 1 Deoxynucleoside kinase AAA_24 PF13479.6 RKO91722.1 - 0.0098 15.6 0.0 0.034 13.9 0.0 2.0 2 1 0 2 2 2 1 AAA domain T2SSE PF00437.20 RKO91722.1 - 0.012 14.6 0.3 0.012 14.6 0.3 1.5 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_22 PF13401.6 RKO91722.1 - 0.014 15.6 1.2 0.023 15.0 0.5 1.8 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 RKO91722.1 - 0.023 14.7 0.0 0.046 13.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ResIII PF04851.15 RKO91722.1 - 0.042 13.9 0.0 0.054 13.5 0.0 1.5 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_19 PF13245.6 RKO91722.1 - 0.042 14.2 5.2 0.051 13.9 1.7 2.3 2 1 0 2 2 2 0 AAA domain ATPase PF06745.13 RKO91722.1 - 0.045 13.1 1.5 0.081 12.3 0.1 1.9 2 0 0 2 2 2 0 KaiC 2-Hacid_dh PF00389.30 RKO91722.1 - 0.05 13.3 0.0 0.069 12.8 0.0 1.2 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FtsK_SpoIIIE PF01580.18 RKO91722.1 - 0.06 12.7 0.1 0.13 11.6 0.1 1.6 1 0 0 1 1 1 0 FtsK/SpoIIIE family NTPase_1 PF03266.15 RKO91722.1 - 0.062 13.2 3.3 0.085 12.8 0.1 2.1 2 1 0 2 2 2 0 NTPase SKI PF01202.22 RKO91722.1 - 0.085 13.0 1.5 0.23 11.6 1.5 1.8 1 1 0 1 1 1 0 Shikimate kinase Zeta_toxin PF06414.12 RKO91722.1 - 0.097 11.9 1.0 0.34 10.2 0.1 2.1 2 0 0 2 2 2 0 Zeta toxin RuvB_N PF05496.12 RKO91722.1 - 0.13 12.0 1.0 0.51 10.1 0.1 2.2 2 1 1 3 3 3 0 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 RKO91722.1 - 0.15 11.4 0.0 0.34 10.3 0.0 1.6 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 RKO91722.1 - 0.88 9.3 3.8 2.6 7.7 3.8 1.9 1 1 0 1 1 1 0 AAA domain Dickkopf_N PF04706.12 RKO91725.1 - 0.00038 20.9 0.1 0.77 10.3 0.0 2.3 2 0 0 2 2 2 2 Dickkopf N-terminal cysteine-rich region Lustrin_cystein PF14625.6 RKO91725.1 - 0.0016 18.8 8.1 0.053 13.9 1.6 2.2 2 0 0 2 2 2 2 Lustrin, cysteine-rich repeated domain SCRL PF06876.12 RKO91725.1 - 0.004 17.3 0.3 2 8.6 0.1 2.2 2 0 0 2 2 2 2 Plant self-incompatibility response (SCRL) protein DSL PF01414.19 RKO91725.1 - 0.11 12.8 4.8 3.5 8.0 0.3 2.2 2 0 0 2 2 2 0 Delta serrate ligand CBM_1 PF00734.18 RKO91725.1 - 0.76 9.8 5.1 7.8 6.6 0.3 2.5 2 0 0 2 2 2 0 Fungal cellulose binding domain Kinesin PF00225.23 RKO91727.1 - 3.9e-37 127.9 0.0 5.9e-37 127.3 0.0 1.2 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO91727.1 - 2.7e-11 43.6 0.0 4.5e-11 42.9 0.0 1.3 1 0 0 1 1 1 1 Microtubule binding ResIII PF04851.15 RKO91727.1 - 0.11 12.5 0.1 0.33 11.0 0.1 1.6 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit APH PF01636.23 RKO91729.1 - 0.032 14.2 0.0 0.07 13.0 0.0 1.5 1 0 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 RKO91729.1 - 0.072 11.9 0.0 0.11 11.2 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Kdo PF06293.14 RKO91729.1 - 0.13 11.6 0.0 0.23 10.8 0.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 RKO91731.1 - 4.1e-35 121.4 0.0 5.1e-35 121.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91731.1 - 8.4e-20 71.1 0.0 1.2e-19 70.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO91731.1 - 0.13 12.2 0.0 0.27 11.1 0.0 1.4 1 1 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 RKO91731.1 - 0.17 10.6 0.0 0.27 10.0 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase Pkinase PF00069.25 RKO91732.1 - 1.1e-20 74.2 0.0 1.2e-20 74.0 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO91732.1 - 4.1e-08 32.8 0.0 4.9e-08 32.6 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase MFAP1 PF06991.11 RKO91733.1 - 8.3e-71 238.3 23.5 8.3e-71 238.3 23.5 2.8 1 1 1 2 2 2 1 Microfibril-associated/Pre-mRNA processing His_Phos_1 PF00300.22 RKO91737.1 - 2.1e-45 154.8 0.0 2.6e-45 154.5 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) AAA_12 PF13087.6 RKO91738.1 - 2.1e-15 56.9 0.0 7.7e-15 55.0 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_11 PF13086.6 RKO91738.1 - 9.4e-12 45.3 0.0 5e-07 29.8 0.0 2.2 1 1 0 2 2 2 2 AAA domain AAA_19 PF13245.6 RKO91738.1 - 1.2e-10 42.0 0.0 2.4e-10 40.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 RKO91738.1 - 3.6e-10 39.9 0.0 2.3e-09 37.2 0.0 2.4 2 0 0 2 2 2 1 AAA domain UvrD_C_2 PF13538.6 RKO91738.1 - 0.0004 20.2 0.3 0.003 17.4 0.3 2.5 1 1 0 1 1 1 1 UvrD-like helicase C-terminal domain Cas_Cas4 PF01930.17 RKO91738.1 - 0.00064 19.9 0.1 0.0062 16.7 0.0 2.4 3 0 0 3 3 3 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 RKO91738.1 - 0.0014 18.6 0.0 0.0033 17.4 0.0 1.6 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily DEAD PF00270.29 RKO91738.1 - 0.0023 17.7 0.0 0.0056 16.5 0.0 1.7 1 0 0 1 1 1 1 DEAD/DEAH box helicase UvrD-helicase PF00580.21 RKO91738.1 - 0.0026 17.3 0.0 0.0039 16.8 0.0 1.2 1 0 0 1 1 1 1 UvrD/REP helicase N-terminal domain AAA_22 PF13401.6 RKO91738.1 - 0.047 14.0 0.0 0.23 11.7 0.0 2.3 2 0 0 2 2 2 0 AAA domain Helicase_RecD PF05127.14 RKO91738.1 - 0.093 12.6 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 Helicase PhoH PF02562.16 RKO91738.1 - 0.16 11.4 0.0 0.3 10.5 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein E1-E2_ATPase PF00122.20 RKO91743.1 - 3.8e-28 98.2 0.2 3.8e-28 98.2 0.2 2.0 2 0 0 2 2 2 1 E1-E2 ATPase BaxI_1 PF12811.7 RKO91743.1 - 0.0062 16.1 0.4 0.0096 15.5 0.4 1.2 1 0 0 1 1 1 1 Bax inhibitor 1 like Cation_ATPase_N PF00690.26 RKO91743.1 - 0.53 10.0 0.0 0.53 10.0 0.0 2.0 2 0 0 2 2 2 0 Cation transporter/ATPase, N-terminus Rer1 PF03248.13 RKO91745.1 - 0.11 12.2 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Rer1 family UFD1 PF03152.14 RKO91746.1 - 0.078 12.4 0.1 0.15 11.5 0.1 1.4 1 0 0 1 1 1 0 Ubiquitin fusion degradation protein UFD1 GPHH PF16905.5 RKO91748.1 - 0.13 12.1 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 Voltage-dependent L-type calcium channel, IQ-associated Sec_GG PF07549.14 RKO91749.1 - 0.039 13.5 0.9 0.068 12.7 0.9 1.4 1 0 0 1 1 1 0 SecD/SecF GG Motif MIR PF02815.19 RKO91751.1 - 1.8e-09 37.7 0.0 2.5e-09 37.3 0.0 1.2 1 0 0 1 1 1 1 MIR domain HNF-1_N PF04814.13 RKO91752.1 - 0.034 14.8 0.5 0.051 14.2 0.2 1.4 1 1 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), N terminus ACC_central PF08326.12 RKO91753.1 - 5.8e-195 649.7 0.0 7.2e-195 649.4 0.0 1.1 1 0 0 1 1 1 1 Acetyl-CoA carboxylase, central region Carboxyl_trans PF01039.22 RKO91753.1 - 5.6e-168 559.6 0.0 7.3e-168 559.2 0.0 1.1 1 0 0 1 1 1 1 Carboxyl transferase domain CPSase_L_D2 PF02786.17 RKO91753.1 - 2e-54 184.3 0.0 4.4e-54 183.2 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_C PF02785.19 RKO91753.1 - 2.2e-20 72.8 0.0 1.3e-19 70.3 0.0 2.3 2 0 0 2 2 2 1 Biotin carboxylase C-terminal domain Biotin_lipoyl PF00364.22 RKO91753.1 - 3.3e-13 49.2 0.0 7.7e-13 48.1 0.0 1.7 1 0 0 1 1 1 1 Biotin-requiring enzyme ATP-grasp_3 PF02655.14 RKO91753.1 - 0.0023 18.0 0.0 0.0059 16.7 0.0 1.7 1 0 0 1 1 1 1 ATP-grasp domain Biotin_lipoyl_2 PF13533.6 RKO91753.1 - 0.0032 17.3 0.0 0.018 14.8 0.0 2.2 2 0 0 2 2 2 1 Biotin-lipoyl like Dala_Dala_lig_C PF07478.13 RKO91753.1 - 0.13 11.8 0.0 0.33 10.5 0.0 1.7 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus Kelch_6 PF13964.6 RKO91754.1 - 3.2e-05 24.1 1.9 0.5 10.7 0.0 3.7 2 1 1 3 3 3 2 Kelch motif Kelch_1 PF01344.25 RKO91754.1 - 0.00097 18.7 2.1 7.7 6.2 0.3 3.8 4 0 0 4 4 4 2 Kelch motif PQQ_3 PF13570.6 RKO91754.1 - 0.02 15.4 4.5 3.7 8.2 0.6 3.2 2 1 0 2 2 2 0 PQQ-like domain Kelch_3 PF13415.6 RKO91754.1 - 0.18 12.1 9.0 0.66 10.3 0.1 3.8 4 0 0 4 4 4 0 Galactose oxidase, central domain Kelch_4 PF13418.6 RKO91754.1 - 0.93 9.6 6.9 9.5 6.3 0.0 3.7 4 0 0 4 4 4 0 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO91755.1 - 1.1e-08 34.8 0.3 0.0046 16.9 0.2 2.5 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 RKO91755.1 - 1.1e-06 28.7 5.0 0.56 10.6 0.1 4.8 4 1 1 5 5 5 2 Kelch motif Kelch_2 PF07646.15 RKO91755.1 - 0.00052 19.9 0.0 9.9 6.3 0.0 4.2 4 0 0 4 4 4 1 Kelch motif Kelch_3 PF13415.6 RKO91755.1 - 0.0024 18.1 8.2 0.047 14.0 0.2 4.3 4 1 1 5 5 5 2 Galactose oxidase, central domain Kelch_4 PF13418.6 RKO91755.1 - 0.12 12.4 8.0 2.7 8.1 0.3 4.7 5 0 0 5 5 5 0 Galactose oxidase, central domain PQQ_3 PF13570.6 RKO91755.1 - 1.5 9.4 0.0 1.5 9.4 0.0 3.7 5 1 0 5 5 5 0 PQQ-like domain PH PF00169.29 RKO91756.1 - 5.1e-05 23.7 0.0 0.00012 22.6 0.0 1.6 1 0 0 1 1 1 1 PH domain Cpn60_TCP1 PF00118.24 RKO91757.1 - 4.3e-80 269.7 4.3 5.3e-80 269.4 4.3 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family CRM1_repeat PF18777.1 RKO91757.1 - 0.055 13.0 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Chromosome region maintenance or exportin repeat BRCT PF00533.26 RKO91757.1 - 0.061 13.7 0.0 0.47 10.9 0.0 2.4 1 1 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain Cpn60_TCP1 PF00118.24 RKO91758.1 - 1.4e-17 63.6 0.0 1.5e-17 63.5 0.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Ribosomal_S9 PF00380.19 RKO91761.1 - 2.1e-33 115.4 0.3 2.4e-33 115.2 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 HMA PF00403.26 RKO91762.1 - 7.7e-52 173.6 2.7 4.2e-15 55.9 0.1 4.6 4 0 0 4 4 4 4 Heavy-metal-associated domain E1-E2_ATPase PF00122.20 RKO91762.1 - 7.3e-49 165.7 2.4 2.3e-48 164.1 1.1 2.3 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 RKO91762.1 - 2.2e-48 165.3 1.8 3.5e-48 164.7 1.8 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 RKO91762.1 - 0.0098 15.7 2.7 0.055 13.2 0.9 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase SNF2_N PF00176.23 RKO91763.1 - 1.1e-37 129.6 3.3 1.2e-25 90.0 0.1 2.9 2 1 1 3 3 3 2 SNF2 family N-terminal domain ResIII PF04851.15 RKO91763.1 - 3.2e-05 24.0 0.9 0.0027 17.7 0.9 2.2 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 RKO91763.1 - 0.0024 17.6 0.8 0.068 12.8 0.0 2.5 2 1 1 3 3 3 1 SWI2/SNF2 ATPase AAA_34 PF13872.6 RKO91763.1 - 0.066 12.1 0.0 1.6 7.6 0.0 2.1 2 0 0 2 2 2 0 P-loop containing NTP hydrolase pore-1 Helicase_C PF00271.31 RKO91764.1 - 4.6e-07 30.2 0.0 6.8e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SNF2_N PF00176.23 RKO91764.1 - 0.021 13.6 0.0 0.027 13.2 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain NKAIN PF05640.14 RKO91764.1 - 0.15 11.3 0.0 0.23 10.7 0.0 1.2 1 0 0 1 1 1 0 Na,K-Atpase Interacting protein Helicase_C PF00271.31 RKO91765.1 - 5.1e-18 65.4 0.0 8.1e-18 64.8 0.0 1.3 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 RKO91765.1 - 0.011 14.9 0.0 0.011 14.9 0.0 1.2 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase Pyr_redox_2 PF07992.14 RKO91766.1 - 4.7e-54 183.6 0.0 5.7e-54 183.3 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 RKO91766.1 - 3.7e-12 46.6 0.0 6.9e-11 42.6 0.0 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 RKO91766.1 - 5.8e-05 22.5 0.8 0.039 13.2 0.1 2.4 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 RKO91766.1 - 0.00021 21.0 0.1 0.38 10.3 0.0 3.2 3 0 0 3 3 3 1 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 RKO91766.1 - 0.003 18.0 0.0 0.32 11.5 0.0 2.5 2 1 0 2 2 2 1 Putative NAD(P)-binding K_oxygenase PF13434.6 RKO91766.1 - 0.014 14.6 0.0 2.9 7.0 0.0 2.9 2 1 1 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 RKO91766.1 - 0.029 13.1 0.8 0.21 10.3 0.0 2.3 2 1 1 3 3 3 0 HI0933-like protein RMMBL PF07521.12 RKO91766.1 - 0.073 13.0 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain Shikimate_DH PF01488.20 RKO91766.1 - 0.15 12.1 0.0 0.65 10.1 0.0 2.0 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase NAD_binding_9 PF13454.6 RKO91766.1 - 0.17 11.9 0.1 16 5.4 0.0 3.5 3 1 1 4 4 4 0 FAD-NAD(P)-binding MFS_1 PF07690.16 RKO91767.1 - 1.5e-08 34.0 26.0 1.5e-07 30.7 16.7 2.1 1 1 0 2 2 2 2 Major Facilitator Superfamily HAP1_N PF04849.13 RKO91768.1 - 3.4e-07 29.8 1.0 3.4e-07 29.8 1.0 2.5 2 1 0 2 2 2 1 HAP1 N-terminal conserved region cwf21 PF08312.12 RKO91768.1 - 0.00045 20.3 0.2 0.56 10.4 0.0 2.8 2 1 0 2 2 2 2 cwf21 domain Filament PF00038.21 RKO91768.1 - 0.017 14.7 1.3 0.017 14.7 1.3 2.6 2 1 0 3 3 3 0 Intermediate filament protein Med9 PF07544.13 RKO91768.1 - 0.12 12.4 2.9 0.61 10.2 0.2 2.5 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 V_ATPase_I PF01496.19 RKO91768.1 - 0.16 9.9 1.5 0.22 9.4 1.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family SOAR PF16533.5 RKO91768.1 - 0.26 11.3 1.3 0.77 9.8 1.3 1.8 1 0 0 1 1 1 0 STIM1 Orai1-activating region DUF3138 PF11336.8 RKO91768.1 - 0.59 8.7 1.6 9.3 4.7 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3138) SIKE PF05769.11 RKO91768.1 - 1.3 8.9 7.2 0.14 12.1 0.9 2.4 2 1 1 3 3 3 0 SIKE family Cnn_1N PF07989.11 RKO91768.1 - 2 8.6 6.1 0.45 10.7 0.4 2.6 3 0 0 3 3 3 0 Centrosomin N-terminal motif 1 7tm_3 PF00003.22 RKO91769.1 - 6e-28 98.2 15.1 6e-28 98.2 15.1 1.8 2 0 0 2 2 2 1 7 transmembrane sweet-taste receptor of 3 GCPR Peripla_BP_4 PF13407.6 RKO91769.1 - 7.6e-12 45.3 4.2 9.3e-09 35.2 0.8 2.8 2 1 0 2 2 2 2 Periplasmic binding protein domain Ephrin_rec_like PF07699.13 RKO91769.1 - 1.2e-06 28.1 8.9 1.2e-06 28.1 8.9 2.1 2 0 0 2 2 2 1 Putative ephrin-receptor like Peripla_BP_1 PF00532.21 RKO91769.1 - 0.0022 17.5 0.2 0.0046 16.4 0.0 1.5 2 0 0 2 2 2 1 Periplasmic binding proteins and sugar binding domain of LacI family NCD3G PF07562.14 RKO91769.1 - 0.5 10.4 6.5 0.13 12.2 2.4 2.0 1 1 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR CPP1-like PF11833.8 RKO91769.1 - 1.5 8.4 7.9 15 5.2 0.3 3.5 3 1 0 3 3 3 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like COesterase PF00135.28 RKO91771.1 - 4.4e-51 174.3 3.2 9.4e-30 103.9 0.4 2.0 1 1 1 2 2 2 2 Carboxylesterase family Abhydrolase_3 PF07859.13 RKO91771.1 - 0.0023 17.8 0.1 0.004 17.1 0.1 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Esterase_phd PF10503.9 RKO91771.1 - 0.097 12.1 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 Esterase PHB depolymerase COesterase PF00135.28 RKO91772.1 - 1.1e-60 206.0 0.1 1.2e-60 205.9 0.1 1.0 1 0 0 1 1 1 1 Carboxylesterase family Abhydrolase_3 PF07859.13 RKO91772.1 - 4.4e-06 26.7 0.4 0.082 12.8 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Mannosyl_trans3 PF11051.8 RKO91773.1 - 2.7e-23 82.7 0.0 1.6e-16 60.5 0.0 2.1 2 0 0 2 2 2 2 Mannosyltransferase putative TPT PF03151.16 RKO91774.1 - 4.2e-28 98.5 22.7 5.4e-28 98.2 22.7 1.1 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 RKO91774.1 - 0.0037 17.4 11.9 0.0037 17.4 11.9 2.6 3 0 0 3 3 3 1 EamA-like transporter family RgpF PF05045.12 RKO91776.1 - 1.9e-06 26.9 0.0 1.2e-05 24.3 0.0 1.9 1 1 0 1 1 1 1 Rhamnan synthesis protein F Clr2_transil PF16761.5 RKO91777.1 - 1.9e-13 51.1 0.1 5.7e-13 49.5 0.1 1.9 1 0 0 1 1 1 1 Transcription-silencing protein, cryptic loci regulator Clr2 PDEase_I PF00233.19 RKO91779.1 - 8e-73 245.1 0.0 9.4e-73 244.8 0.0 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase Latrotoxin_C PF15658.6 RKO91779.1 - 0.019 14.7 0.0 0.026 14.3 0.0 1.2 1 0 0 1 1 1 0 Latrotoxin C-terminal domain HD PF01966.22 RKO91779.1 - 0.076 13.2 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 HD domain SH3_9 PF14604.6 RKO91781.1 - 0.0016 18.3 0.0 0.0029 17.4 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain TMEM154 PF15102.6 RKO91781.1 - 0.032 14.1 0.1 0.068 13.1 0.1 1.5 1 0 0 1 1 1 0 TMEM154 protein family Orf78 PF06024.12 RKO91781.1 - 0.13 12.6 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 Orf78 (ac78) Adeno_E3_CR2 PF02439.15 RKO91781.1 - 0.16 11.8 2.0 0.31 10.8 2.0 1.4 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 RIFIN PF02009.16 RKO91781.1 - 0.22 11.4 1.1 0.35 10.7 1.1 1.2 1 0 0 1 1 1 0 Rifin Endomucin PF07010.12 RKO91781.1 - 0.93 9.4 15.2 0.043 13.8 7.7 2.1 2 1 0 2 2 2 0 Endomucin His_Phos_2 PF00328.22 RKO91783.1 - 1.4e-27 97.1 0.0 9.2e-27 94.4 0.0 1.9 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) SRA1 PF07304.11 RKO91784.1 - 1.7e-05 24.6 1.7 1.9e-05 24.5 0.0 2.0 2 1 0 2 2 2 1 Steroid receptor RNA activator (SRA1) Prp18 PF02840.15 RKO91784.1 - 0.0041 17.2 0.0 0.0077 16.3 0.0 1.4 1 1 0 1 1 1 1 Prp18 domain CS PF04969.16 RKO91785.1 - 2.5e-09 38.0 0.0 3.9e-09 37.4 0.0 1.3 1 0 0 1 1 1 1 CS domain Nitro_FeMo-Co PF02579.17 RKO91785.1 - 0.06 13.7 0.0 0.15 12.4 0.0 1.7 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor DBD_Tnp_Mut PF03108.15 RKO91786.1 - 0.00028 20.8 0.1 0.00041 20.3 0.1 1.2 1 0 0 1 1 1 1 MuDR family transposase RVT_2 PF07727.14 RKO91789.1 - 0.041 13.5 0.0 0.044 13.4 0.0 1.0 1 0 0 1 1 1 0 Reverse transcriptase (RNA-dependent DNA polymerase) SbcCD_C PF13558.6 RKO91790.1 - 0.049 13.9 0.0 0.11 12.7 0.0 1.7 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TMP_2 PF06791.13 RKO91791.1 - 0.033 13.9 0.0 0.058 13.1 0.0 1.5 1 1 0 1 1 1 0 Prophage tail length tape measure protein GHMP_kinases_C PF08544.13 RKO91792.1 - 0.14 12.5 0.2 0.43 11.0 0.2 1.8 1 0 0 1 1 1 0 GHMP kinases C terminal HEAT_EZ PF13513.6 RKO91793.1 - 3.7e-24 84.8 13.1 7.3e-12 45.5 0.0 9.2 8 2 3 11 11 10 5 HEAT-like repeat HEAT PF02985.22 RKO91793.1 - 5.4e-21 72.9 16.4 0.0075 16.4 0.0 10.4 10 0 0 10 10 10 5 HEAT repeat HEAT_2 PF13646.6 RKO91793.1 - 6e-14 52.2 3.8 0.00058 20.2 0.0 6.9 7 1 0 7 7 7 2 HEAT repeats Cnd1 PF12717.7 RKO91793.1 - 9.5e-14 51.8 4.2 0.00084 19.4 0.1 5.4 3 3 1 4 4 4 3 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 RKO91793.1 - 6e-12 46.0 0.4 0.074 13.7 0.0 6.8 5 1 3 8 8 7 3 Vacuolar 14 Fab1-binding region UME PF08064.13 RKO91793.1 - 4.2e-07 29.8 0.4 0.17 11.8 0.0 4.3 3 0 0 3 3 3 2 UME (NUC010) domain Adaptin_N PF01602.20 RKO91793.1 - 7.6e-06 24.8 3.8 0.082 11.4 0.0 3.5 2 2 1 3 3 3 2 Adaptin N terminal region DUF3385 PF11865.8 RKO91793.1 - 7.9e-06 25.9 0.1 1.8 8.5 0.0 5.3 7 0 0 7 7 7 2 Domain of unknown function (DUF3385) IBN_N PF03810.19 RKO91793.1 - 0.0025 17.7 0.0 0.069 13.1 0.0 3.1 3 0 0 3 3 3 1 Importin-beta N-terminal domain XPC-binding PF09280.11 RKO91793.1 - 0.0033 17.1 1.6 1.9 8.3 0.2 4.1 3 0 0 3 3 3 1 XPC-binding domain DUF3437 PF11919.8 RKO91793.1 - 0.012 15.5 0.1 0.82 9.6 0.0 4.0 5 0 0 5 5 5 0 Domain of unknown function (DUF3437) Arm PF00514.23 RKO91793.1 - 0.017 15.1 14.3 0.11 12.6 0.0 6.0 6 0 0 6 6 6 0 Armadillo/beta-catenin-like repeat Cation_ATPase_C PF00689.21 RKO91795.1 - 1.2e-07 31.6 0.1 1.4e-07 31.4 0.1 1.0 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus NST1 PF13945.6 RKO91796.1 - 0.14 12.2 6.7 0.2 11.7 6.7 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator SelP_N PF04592.14 RKO91796.1 - 0.42 10.0 7.5 0.6 9.5 7.5 1.2 1 0 0 1 1 1 0 Selenoprotein P, N terminal region Menin PF05053.13 RKO91796.1 - 0.54 8.6 2.6 0.62 8.4 2.6 1.1 1 0 0 1 1 1 0 Menin Corazonin PF17308.2 RKO91796.1 - 9.2 6.6 13.2 13 6.2 12.3 1.7 1 1 1 2 2 2 0 Pro-corazonin VASt PF16016.5 RKO91798.1 - 1e-13 52.0 0.0 3.3e-13 50.3 0.0 1.7 2 0 0 2 2 2 1 VAD1 Analog of StAR-related lipid transfer domain HSP70 PF00012.20 RKO91800.1 - 3.2e-263 874.4 10.3 3.7e-263 874.2 10.3 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 RKO91800.1 - 8.9e-14 51.0 6.7 3.2e-12 45.9 0.9 2.7 3 0 0 3 3 3 2 MreB/Mbl protein FGGY_C PF02782.16 RKO91800.1 - 2.3e-05 24.2 0.0 4.7e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain FtsA PF14450.6 RKO91800.1 - 0.00022 21.6 4.4 0.22 12.0 0.0 4.0 3 1 0 3 3 3 2 Cell division protein FtsA Ploopntkinase3 PF18751.1 RKO91800.1 - 0.0027 17.6 0.1 0.42 10.5 0.0 2.5 2 0 0 2 2 2 1 P-loop Nucleotide Kinase3 Raco_middle PF17651.1 RKO91800.1 - 0.03 14.0 0.4 3.2 7.4 0.0 2.7 2 0 0 2 2 2 0 RACo middle region Spectrin PF00435.21 RKO91800.1 - 0.15 12.5 3.1 0.33 11.4 3.1 1.6 1 0 0 1 1 1 0 Spectrin repeat CofC PF01983.16 RKO91801.1 - 0.12 11.5 0.0 0.17 11.0 0.0 1.1 1 0 0 1 1 1 0 Guanylyl transferase CofC like PXA PF02194.15 RKO91802.1 - 2.8e-48 164.3 0.0 4.4e-48 163.7 0.0 1.3 1 0 0 1 1 1 1 PXA domain DUF1929 PF09118.11 RKO91802.1 - 4.5e-21 75.0 0.7 9.2e-21 74.0 0.7 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1929) Nexin_C PF08628.12 RKO91802.1 - 2e-14 54.1 0.0 4.2e-14 53.1 0.0 1.6 1 0 0 1 1 1 1 Sorting nexin C terminal Glyoxal_oxid_N PF07250.11 RKO91802.1 - 6.7e-08 32.0 0.0 1.1e-07 31.3 0.0 1.3 1 0 0 1 1 1 1 Glyoxal oxidase N-terminus B2 PF11473.8 RKO91802.1 - 0.2 11.5 0.1 1.5 8.7 0.0 2.4 2 0 0 2 2 2 0 RNA binding protein B2 PPP4R2 PF09184.11 RKO91802.1 - 0.47 10.0 4.0 0.81 9.2 4.0 1.4 1 0 0 1 1 1 0 PPP4R2 Nop14 PF04147.12 RKO91802.1 - 0.84 7.8 5.1 1.2 7.2 5.1 1.1 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 RKO91802.1 - 3.4 7.0 5.4 5.4 6.3 5.4 1.2 1 0 0 1 1 1 0 SDA1 CENP-B_dimeris PF09026.10 RKO91802.1 - 4 7.9 17.7 10 6.6 17.7 1.6 1 0 0 1 1 1 0 Centromere protein B dimerisation domain NOA36 PF06524.12 RKO91802.1 - 4.6 6.5 11.8 7.3 5.8 11.8 1.2 1 0 0 1 1 1 0 NOA36 protein Cwf_Cwc_15 PF04889.12 RKO91802.1 - 6.3 6.4 13.7 11 5.6 13.7 1.3 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein CCDC154 PF15450.6 RKO91804.1 - 0.043 12.4 97.1 0.035 12.7 22.4 4.5 1 1 2 4 4 4 0 Coiled-coil domain-containing protein 154 Baculo_PEP_C PF04513.12 RKO91804.1 - 0.069 13.2 34.0 5 7.2 0.8 8.3 3 3 4 8 8 8 0 Baculovirus polyhedron envelope protein, PEP, C terminus Apolipoprotein PF01442.18 RKO91804.1 - 3.8 7.3 120.9 0.038 13.9 25.1 6.9 2 2 4 7 7 7 0 Apolipoprotein A1/A4/E domain RNA_pol_Rpb1_1 PF04997.12 RKO91805.1 - 2.5e-12 46.7 0.6 3.5e-12 46.3 0.6 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 Mito_fiss_reg PF05308.11 RKO91805.1 - 0.24 11.5 2.4 0.26 11.3 2.4 1.1 1 0 0 1 1 1 0 Mitochondrial fission regulator DUF3328 PF11807.8 RKO91806.1 - 4.5e-10 39.7 11.8 3.5e-05 23.7 7.5 3.3 2 1 0 2 2 2 2 Domain of unknown function (DUF3328) Gyro_capsid PF04162.12 RKO91806.1 - 0.022 13.3 0.1 0.039 12.5 0.1 1.4 1 0 0 1 1 1 0 Gyrovirus capsid protein (VP1) MIF4G PF02854.19 RKO91807.1 - 1.8e-62 210.8 1.7 1.8e-32 112.7 0.0 3.4 3 1 0 3 3 3 3 MIF4G domain Upf2 PF04050.14 RKO91807.1 - 1.4e-32 113.3 2.4 4.6e-32 111.6 2.4 2.0 1 0 0 1 1 1 1 Up-frameshift suppressor 2 TPR_2 PF07719.17 RKO91807.1 - 0.48 10.7 3.2 0.53 10.5 0.4 2.6 3 0 0 3 3 3 0 Tetratricopeptide repeat Delta_lysin PF05372.11 RKO91808.1 - 0.12 11.7 0.1 0.2 10.9 0.1 1.4 1 0 0 1 1 1 0 Delta lysin family FUSC_2 PF13515.6 RKO91809.1 - 1.5e-16 60.7 16.6 1.5e-16 60.7 16.6 2.6 2 0 0 2 2 2 1 Fusaric acid resistance protein-like ALMT PF11744.8 RKO91809.1 - 5.8e-09 35.3 23.6 4e-05 22.7 0.4 2.5 2 1 0 2 2 2 2 Aluminium activated malate transporter FUSC PF04632.12 RKO91809.1 - 5.3e-08 31.9 20.2 5.3e-08 31.9 20.2 2.8 3 1 0 3 3 3 2 Fusaric acid resistance protein family ArAE_2 PF10334.9 RKO91809.1 - 4.6e-05 23.4 0.0 0.43 10.4 0.0 2.8 3 0 0 3 3 3 2 Aromatic acid exporter family member 2 ArAE_2_N PF10337.9 RKO91809.1 - 0.00072 18.7 0.4 0.00072 18.7 0.4 2.2 1 1 1 2 2 2 1 Putative ER transporter, 6TM, N-terminal FUSC-like PF12805.7 RKO91809.1 - 0.082 12.0 0.1 0.082 12.0 0.1 1.8 2 0 0 2 2 2 0 FUSC-like inner membrane protein yccS DUF1418 PF07214.12 RKO91809.1 - 0.31 10.9 2.8 25 4.8 1.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1418) adh_short PF00106.25 RKO91810.1 - 1.8e-34 118.9 0.7 2.2e-34 118.7 0.7 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO91810.1 - 3.1e-31 108.7 0.5 3.7e-31 108.5 0.5 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 RKO91810.1 - 8.2e-08 32.4 0.1 1.1e-07 31.9 0.1 1.1 1 0 0 1 1 1 1 KR domain NAD_binding_6 PF08030.12 RKO91811.1 - 5.2e-33 114.4 0.0 1e-32 113.5 0.0 1.5 1 0 0 1 1 1 1 Ferric reductase NAD binding domain FAD_binding_8 PF08022.12 RKO91811.1 - 2e-20 72.9 0.0 4.5e-20 71.8 0.0 1.6 1 0 0 1 1 1 1 FAD-binding domain Ferric_reduct PF01794.19 RKO91811.1 - 3.9e-19 69.0 14.1 7.7e-19 68.0 14.1 1.5 1 0 0 1 1 1 1 Ferric reductase like transmembrane component NAD_binding_1 PF00175.21 RKO91811.1 - 0.038 14.6 0.0 0.13 12.9 0.0 1.9 3 0 0 3 3 3 0 Oxidoreductase NAD-binding domain SF1-HH PF16275.5 RKO91812.1 - 0.069 13.5 3.8 0.37 11.1 0.1 2.6 2 0 0 2 2 2 0 Splicing factor 1 helix-hairpin domain HAUS6_N PF14661.6 RKO91812.1 - 0.17 11.5 9.1 0.26 10.8 9.1 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus DUF572 PF04502.13 RKO91812.1 - 0.19 11.3 4.7 0.31 10.6 4.7 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF572) MRP-S26 PF14943.6 RKO91812.1 - 7.5 6.4 15.9 12 5.7 15.9 1.3 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S26 Tantalus PF15386.6 RKO91813.1 - 0.082 13.0 0.3 0.16 12.1 0.3 1.4 1 0 0 1 1 1 0 Drosophila Tantalus-like Methyltransf_25 PF13649.6 RKO91816.1 - 0.0049 17.6 0.0 0.0098 16.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO91816.1 - 0.089 12.6 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain AA_kinase PF00696.28 RKO91817.1 - 1.7e-39 135.8 0.0 2.8e-39 135.1 0.0 1.4 1 0 0 1 1 1 1 Amino acid kinase family ACT PF01842.25 RKO91817.1 - 5.1e-08 32.6 0.3 0.00019 21.1 0.1 2.7 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.6 RKO91817.1 - 2e-07 30.7 1.2 4.7e-05 23.1 0.1 2.6 2 0 0 2 2 2 2 ACT domain Pyr_redox_2 PF07992.14 RKO91818.1 - 1.7e-47 162.1 0.6 2e-47 161.9 0.6 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 RKO91818.1 - 1.6e-15 57.1 0.3 5.9e-12 45.4 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 RKO91818.1 - 1.5e-14 54.3 0.1 1.1e-11 45.1 0.0 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 RKO91818.1 - 1.2e-05 24.6 2.9 0.0091 15.1 0.2 3.7 4 0 0 4 4 4 2 Glucose inhibited division protein A Thi4 PF01946.17 RKO91818.1 - 1.4e-05 24.4 2.4 0.00019 20.7 0.1 3.0 2 1 1 3 3 3 1 Thi4 family NAD_binding_7 PF13241.6 RKO91818.1 - 0.001 19.4 0.2 0.15 12.5 0.0 2.7 2 2 0 2 2 2 1 Putative NAD(P)-binding FAD_binding_2 PF00890.24 RKO91818.1 - 0.0013 17.9 4.1 0.012 14.7 0.4 3.1 2 1 0 3 3 3 1 FAD binding domain Trp_halogenase PF04820.14 RKO91818.1 - 0.0016 17.4 0.1 0.051 12.4 0.0 2.2 2 0 0 2 2 2 1 Tryptophan halogenase K_oxygenase PF13434.6 RKO91818.1 - 0.0017 17.6 0.1 0.025 13.7 0.0 2.7 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_8 PF13450.6 RKO91818.1 - 0.002 18.3 0.9 0.026 14.7 0.1 2.6 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 RKO91818.1 - 0.0027 17.1 1.0 0.026 13.9 0.2 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase DAO PF01266.24 RKO91818.1 - 0.011 15.4 3.7 0.18 11.4 0.7 2.6 1 1 0 2 2 2 0 FAD dependent oxidoreductase HI0933_like PF03486.14 RKO91818.1 - 0.013 14.2 0.9 0.11 11.2 0.2 2.3 1 1 0 2 2 2 0 HI0933-like protein FAD_binding_3 PF01494.19 RKO91818.1 - 0.016 14.4 0.0 0.035 13.3 0.0 1.5 1 0 0 1 1 1 0 FAD binding domain FMO-like PF00743.19 RKO91818.1 - 0.029 12.8 0.0 0.056 11.9 0.0 1.5 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like Shikimate_DH PF01488.20 RKO91818.1 - 0.061 13.4 0.2 17 5.5 0.0 2.6 3 0 0 3 3 3 0 Shikimate / quinate 5-dehydrogenase NicO PF03824.16 RKO91821.1 - 0.0027 17.1 2.0 3 7.1 3.2 2.1 2 0 0 2 2 2 2 High-affinity nickel-transport protein COPI_assoc PF08507.10 RKO91821.1 - 0.49 10.4 13.8 1.3 9.0 13.8 1.7 1 1 0 1 1 1 0 COPI associated protein DUF4231 PF14015.6 RKO91821.1 - 1.7 9.2 4.4 2 8.9 2.9 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4231) DUF4460 PF14687.6 RKO91824.1 - 0.00011 22.2 0.0 0.0002 21.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4460) BTB PF00651.31 RKO91825.1 - 3.8e-05 23.9 0.0 0.00043 20.5 0.0 2.2 1 1 0 1 1 1 1 BTB/POZ domain RR_TM4-6 PF06459.12 RKO91825.1 - 3 7.6 8.5 5.9 6.6 8.5 1.4 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Presenilin PF01080.17 RKO91825.1 - 7.3 5.2 5.3 13 4.4 5.3 1.3 1 0 0 1 1 1 0 Presenilin TERB2 PF15101.6 RKO91825.1 - 8.7 6.3 6.4 20 5.1 6.4 1.5 1 0 0 1 1 1 0 Telomere-associated protein TERB2 PQQ_3 PF13570.6 RKO91826.1 - 0.3 11.6 3.6 2.1 8.9 0.1 3.2 3 0 0 3 3 3 0 PQQ-like domain ADH_zinc_N PF00107.26 RKO91828.1 - 1.2e-24 86.7 0.0 2e-24 86.1 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 RKO91828.1 - 0.00031 21.8 0.0 0.00046 21.3 0.0 1.2 1 0 0 1 1 1 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.19 RKO91828.1 - 0.0039 16.6 0.2 0.0065 15.9 0.2 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 RKO91828.1 - 0.033 13.7 0.1 0.051 13.2 0.1 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AlaDh_PNT_C PF01262.21 RKO91828.1 - 0.073 12.4 0.3 0.1 11.9 0.3 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 RKO91828.1 - 0.14 12.4 0.0 0.22 11.8 0.0 1.3 1 0 0 1 1 1 0 TrkA-N domain Clr2_transil PF16761.5 RKO91829.1 - 1.1e-17 64.6 0.0 2.2e-17 63.6 0.0 1.5 1 0 0 1 1 1 1 Transcription-silencing protein, cryptic loci regulator Clr2 Transmemb_17 PF09799.9 RKO91830.1 - 3e-26 92.1 5.2 3.5e-26 91.9 5.2 1.1 1 0 0 1 1 1 1 Predicted membrane protein HMG_box PF00505.19 RKO91831.1 - 5.4e-16 58.8 2.4 6.7e-16 58.5 2.4 1.1 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 RKO91831.1 - 0.0076 16.8 0.8 0.0088 16.6 0.8 1.2 1 0 0 1 1 1 1 HMG-box domain Kelch_3 PF13415.6 RKO91833.1 - 1.8e-11 44.0 6.7 2e-05 24.7 0.2 4.0 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO91833.1 - 6e-09 35.9 7.1 5.2e-05 23.4 0.3 3.5 2 1 1 3 3 3 2 Kelch motif Kelch_1 PF01344.25 RKO91833.1 - 1.1e-07 31.3 1.0 0.00015 21.3 0.1 2.8 2 0 0 2 2 2 2 Kelch motif Kelch_5 PF13854.6 RKO91833.1 - 1.3e-07 31.5 4.2 0.0039 17.1 0.1 3.4 3 0 0 3 3 3 2 Kelch motif F-box-like PF12937.7 RKO91833.1 - 3.1e-06 27.0 0.0 0.00011 22.0 0.0 3.3 3 1 0 3 3 3 1 F-box-like Kelch_2 PF07646.15 RKO91833.1 - 2.4e-05 24.1 1.9 0.16 12.0 0.1 3.1 2 0 0 2 2 2 2 Kelch motif Kelch_4 PF13418.6 RKO91833.1 - 0.0006 19.8 10.4 0.0015 18.5 0.7 3.5 2 1 1 3 3 3 1 Galactose oxidase, central domain F-box PF00646.33 RKO91833.1 - 0.0038 17.1 0.5 1.1 9.2 0.0 3.0 2 0 0 2 2 2 1 F-box domain RGS PF00615.19 RKO91834.1 - 8.8e-08 32.4 0.1 1.3e-07 31.9 0.1 1.3 1 0 0 1 1 1 1 Regulator of G protein signaling domain Arr-ms PF12120.8 RKO91834.1 - 0.079 13.2 0.0 1.9 8.7 0.0 2.3 2 0 0 2 2 2 0 Rifampin ADP-ribosyl transferase DivIC PF04977.15 RKO91837.1 - 8.5 6.2 7.3 14 5.5 5.3 2.0 2 0 0 2 2 2 0 Septum formation initiator FliX PF10768.9 RKO91838.1 - 0.1 13.1 0.0 0.16 12.5 0.0 1.3 1 0 0 1 1 1 0 Class II flagellar assembly regulator Isochorismatase PF00857.20 RKO91839.1 - 3e-19 69.9 0.0 5.2e-19 69.1 0.0 1.4 1 1 0 1 1 1 1 Isochorismatase family WD40 PF00400.32 RKO91845.1 - 1.6e-10 41.4 5.8 0.19 12.7 0.0 6.7 5 1 0 5 5 5 3 WD domain, G-beta repeat DUF3767 PF12597.8 RKO91845.1 - 0.069 13.0 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3767) WD40 PF00400.32 RKO91846.1 - 1.4e-07 32.0 0.4 0.0035 18.2 0.1 3.9 3 0 0 3 3 3 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO91846.1 - 2e-07 31.2 0.0 0.16 12.3 0.0 3.5 1 1 2 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain DUF2415 PF10313.9 RKO91846.1 - 0.01 15.7 0.0 0.023 14.6 0.0 1.7 1 0 0 1 1 1 0 Uncharacterised protein domain (DUF2415) Cytochrom_D1 PF02239.16 RKO91846.1 - 0.016 13.8 0.0 0.045 12.3 0.0 1.7 1 1 1 2 2 2 0 Cytochrome D1 heme domain Neuroparsin PF07327.11 RKO91847.1 - 0.091 13.2 1.1 0.37 11.3 0.7 2.1 2 0 0 2 2 2 0 Neuroparsin POP1 PF06978.11 RKO91848.1 - 0.73 9.8 9.5 5.8 6.9 0.2 2.4 2 0 0 2 2 2 0 Ribonucleases P/MRP protein subunit POP1 Clathrin_lg_ch PF01086.17 RKO91849.1 - 0.0061 16.6 7.0 0.0085 16.2 7.0 1.2 1 0 0 1 1 1 1 Clathrin light chain DsrC PF04358.13 RKO91849.1 - 0.024 15.1 0.2 0.046 14.2 0.2 1.4 1 0 0 1 1 1 0 DsrC like protein Fra10Ac1 PF09725.9 RKO91850.1 - 1.8e-26 92.6 1.2 2e-26 92.5 1.2 1.0 1 0 0 1 1 1 1 Folate-sensitive fragile site protein Fra10Ac1 Cyclin_N PF00134.23 RKO91851.1 - 0.0013 18.5 0.1 0.0029 17.4 0.0 1.6 2 0 0 2 2 2 1 Cyclin, N-terminal domain TFIIB PF00382.19 RKO91851.1 - 0.021 14.9 0.0 0.037 14.1 0.0 1.3 1 0 0 1 1 1 0 Transcription factor TFIIB repeat COG4 PF08318.12 RKO91852.1 - 2.7e-88 296.3 0.0 4e-88 295.7 0.0 1.3 1 0 0 1 1 1 1 COG4 transport protein Sec5 PF15469.6 RKO91852.1 - 0.57 10.0 3.6 1.3 8.8 0.5 2.7 2 1 0 2 2 2 0 Exocyst complex component Sec5 Nsp1_C PF05064.13 RKO91852.1 - 1.5 8.7 7.9 0.24 11.2 1.4 2.9 3 1 1 4 4 4 0 Nsp1-like C-terminal region Lyase_1 PF00206.20 RKO91853.1 - 5.4e-103 344.6 0.0 8.1e-103 344.1 0.0 1.2 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.6 RKO91853.1 - 0.016 16.0 0.0 0.04 14.7 0.0 1.7 1 0 0 1 1 1 0 Argininosuccinate lyase C-terminal Proteasome PF00227.26 RKO91854.1 - 4e-46 156.9 0.0 5e-46 156.6 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit DDE_Tnp_4 PF13359.6 RKO91855.1 - 0.0032 17.1 0.0 0.0047 16.6 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease Herpes_ori_bp PF02399.15 RKO91856.1 - 0.0027 15.8 1.7 0.005 15.0 0.4 1.9 1 1 0 2 2 2 1 Origin of replication binding protein DUF723 PF05265.13 RKO91857.1 - 0.099 12.6 0.1 0.21 11.6 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF723) ABC_tran PF00005.27 RKO91859.1 - 2.9e-51 173.6 1.0 2.2e-28 99.5 0.0 4.5 3 2 0 3 3 2 2 ABC transporter AAA_21 PF13304.6 RKO91859.1 - 9e-16 58.5 1.0 0.0027 17.5 0.0 4.2 3 1 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 RKO91859.1 - 6.6e-12 45.3 0.0 0.0021 17.6 0.0 3.7 3 1 0 3 3 3 3 RecF/RecN/SMC N terminal domain Chromo PF00385.24 RKO91859.1 - 9.8e-11 41.4 0.1 1.9e-10 40.5 0.1 1.5 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain AAA_23 PF13476.6 RKO91859.1 - 2.4e-08 34.8 0.0 0.013 16.0 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_28 PF13521.6 RKO91859.1 - 4.4e-08 33.5 0.0 0.0043 17.3 0.0 2.9 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.6 RKO91859.1 - 5e-08 32.6 0.4 0.0096 15.6 0.3 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 RKO91859.1 - 8.4e-08 32.3 0.0 0.0021 18.1 0.0 2.7 2 0 0 2 2 2 2 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 RKO91859.1 - 5.9e-06 26.3 0.1 0.014 15.3 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_22 PF13401.6 RKO91859.1 - 9.4e-06 25.9 0.5 0.11 12.7 0.0 3.5 3 1 0 3 3 2 2 AAA domain AAA_18 PF13238.6 RKO91859.1 - 1.1e-05 25.9 0.2 0.42 11.1 0.0 3.1 3 0 0 3 3 3 2 AAA domain AAA_33 PF13671.6 RKO91859.1 - 9.1e-05 22.7 0.0 0.97 9.6 0.0 3.1 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 RKO91859.1 - 0.00013 22.4 0.4 0.41 11.0 0.0 3.7 4 0 0 4 4 3 1 AAA ATPase domain AAA_15 PF13175.6 RKO91859.1 - 0.00022 21.1 0.1 0.53 9.9 0.2 2.5 2 0 0 2 2 2 2 AAA ATPase domain HEAT_EZ PF13513.6 RKO91859.1 - 0.00035 21.0 5.9 1.8 9.2 0.0 5.0 5 0 0 5 5 4 1 HEAT-like repeat HEAT_2 PF13646.6 RKO91859.1 - 0.00073 19.9 1.3 0.39 11.1 0.0 4.4 2 2 2 4 4 4 1 HEAT repeats DUF815 PF05673.13 RKO91859.1 - 0.00078 18.7 0.1 0.2 10.8 0.0 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF815) Dynamin_N PF00350.23 RKO91859.1 - 0.0014 18.7 0.0 0.15 12.1 0.0 2.8 2 1 0 2 2 2 1 Dynamin family MeaB PF03308.16 RKO91859.1 - 0.0017 17.4 5.9 0.48 9.4 0.1 3.3 3 0 0 3 3 3 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_30 PF13604.6 RKO91859.1 - 0.0023 17.7 2.1 1 9.1 0.0 3.5 4 0 0 4 4 3 1 AAA domain DUF87 PF01935.17 RKO91859.1 - 0.0023 18.0 4.0 0.14 12.2 0.3 3.3 3 0 0 3 3 3 1 Helicase HerA, central domain AAA_27 PF13514.6 RKO91859.1 - 0.0028 17.3 0.1 0.93 9.0 0.0 2.7 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 RKO91859.1 - 0.0029 17.5 0.0 3.6 7.5 0.0 3.0 2 0 0 2 2 2 1 NACHT domain CLASP_N PF12348.8 RKO91859.1 - 0.0052 16.4 0.0 0.036 13.6 0.0 2.2 2 0 0 2 2 2 1 CLASP N terminal TsaE PF02367.17 RKO91859.1 - 0.0055 16.7 0.3 4.9 7.2 0.0 3.2 3 0 0 3 3 3 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 RKO91859.1 - 0.0072 16.7 0.0 9.4 6.7 0.0 2.9 2 0 0 2 2 2 0 RNA helicase AAA_13 PF13166.6 RKO91859.1 - 0.0078 14.9 0.2 2.1 6.9 0.0 2.6 3 0 0 3 3 3 1 AAA domain DUF3584 PF12128.8 RKO91859.1 - 0.0093 13.5 3.4 0.72 7.3 0.2 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF3584) Roc PF08477.13 RKO91859.1 - 0.01 16.0 0.0 3.3 7.9 0.0 2.7 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA PF00004.29 RKO91859.1 - 0.018 15.4 0.0 45 4.5 0.0 3.7 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) Vac14_Fab1_bd PF12755.7 RKO91859.1 - 0.026 15.1 0.0 20 5.9 0.0 3.1 3 0 0 3 3 2 0 Vacuolar 14 Fab1-binding region AAA_7 PF12775.7 RKO91859.1 - 0.036 13.6 0.0 1.9 8.0 0.0 2.3 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_24 PF13479.6 RKO91859.1 - 0.037 13.8 0.0 2.7 7.7 0.0 2.5 2 0 0 2 2 2 0 AAA domain Ploopntkinase3 PF18751.1 RKO91859.1 - 0.041 13.8 0.0 9.9 6.0 0.0 2.4 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 Adaptin_N PF01602.20 RKO91859.1 - 0.054 12.1 0.9 0.11 11.1 0.0 1.8 2 0 0 2 2 2 0 Adaptin N terminal region Zeta_toxin PF06414.12 RKO91859.1 - 0.055 12.8 4.2 1.4 8.2 0.1 3.1 3 1 0 3 3 3 0 Zeta toxin NB-ARC PF00931.22 RKO91859.1 - 0.055 12.6 0.2 6 6.0 0.0 2.5 2 0 0 2 2 2 0 NB-ARC domain FeoB_N PF02421.18 RKO91859.1 - 0.057 12.9 0.0 4.5 6.8 0.1 2.5 2 0 0 2 2 2 0 Ferrous iron transport protein B HEAT PF02985.22 RKO91859.1 - 0.066 13.5 8.6 0.49 10.8 0.0 5.3 7 0 0 7 7 4 0 HEAT repeat IstB_IS21 PF01695.17 RKO91859.1 - 0.083 12.6 0.1 24 4.6 0.1 3.2 3 0 0 3 3 3 0 IstB-like ATP binding protein GTP_EFTU PF00009.27 RKO91859.1 - 0.14 11.7 0.0 1.6 8.3 0.1 2.5 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain Septin PF00735.18 RKO91859.1 - 0.15 11.3 0.0 3.7 6.7 0.0 2.2 2 0 0 2 2 2 0 Septin MukB PF04310.12 RKO91859.1 - 0.18 11.6 0.1 2.9 7.6 0.0 2.2 2 0 0 2 2 2 0 MukB N-terminal PduV-EutP PF10662.9 RKO91859.1 - 0.26 11.0 1.3 3.3 7.4 0.0 2.6 3 0 0 3 3 2 0 Ethanolamine utilisation - propanediol utilisation cobW PF02492.19 RKO91859.1 - 0.41 10.2 3.6 19 4.8 0.2 3.5 4 0 0 4 4 4 0 CobW/HypB/UreG, nucleotide-binding domain Enolase_N PF03952.16 RKO91860.1 - 0.039 14.1 0.0 0.06 13.5 0.0 1.3 1 0 0 1 1 1 0 Enolase, N-terminal domain NMT1 PF09084.11 RKO91861.1 - 4.3e-75 252.4 0.0 5.5e-75 252.0 0.0 1.1 1 0 0 1 1 1 1 NMT1/THI5 like NMT1_2 PF13379.6 RKO91861.1 - 0.0016 18.2 0.0 3.8 7.1 0.0 2.9 3 0 0 3 3 3 2 NMT1-like family PBP_like PF12727.7 RKO91861.1 - 0.042 13.0 0.0 0.16 11.1 0.0 1.8 2 0 0 2 2 2 0 PBP superfamily domain Brix PF04427.18 RKO91863.1 - 5.3e-45 153.9 0.0 7e-45 153.5 0.0 1.2 1 0 0 1 1 1 1 Brix domain NUP50 PF08911.11 RKO91863.1 - 0.15 12.7 0.2 0.15 12.7 0.2 2.6 3 0 0 3 3 3 0 NUP50 (Nucleoporin 50 kDa) PBP1_TM PF14812.6 RKO91863.1 - 9.4 6.7 10.6 1.5 9.2 6.5 1.8 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal RhoGAP PF00620.27 RKO91864.1 - 4.3e-49 166.2 0.0 9.8e-49 165.1 0.0 1.6 1 0 0 1 1 1 1 RhoGAP domain FCH PF00611.23 RKO91864.1 - 1.7e-13 50.6 0.3 1.7e-13 50.6 0.3 2.7 3 0 0 3 3 3 1 Fes/CIP4, and EFC/F-BAR homology domain DUF3417 PF11897.8 RKO91864.1 - 0.13 12.7 1.0 0.94 10.0 0.2 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3417) ABC_tran_CTD PF16326.5 RKO91864.1 - 0.68 10.2 6.3 2.3 8.5 5.4 2.4 2 1 1 3 3 3 0 ABC transporter C-terminal domain DUF489 PF04356.12 RKO91865.1 - 0.013 15.5 0.8 0.015 15.4 0.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF489) Sec2p PF06428.11 RKO91865.1 - 0.04 13.9 3.1 0.051 13.6 3.1 1.3 1 1 0 1 1 1 0 GDP/GTP exchange factor Sec2p Caudo_TAP PF02413.17 RKO91865.1 - 0.085 13.0 1.5 0.089 12.9 1.5 1.0 1 0 0 1 1 1 0 Caudovirales tail fibre assembly protein, lambda gpK DUF4520 PF15016.6 RKO91867.1 - 2.1e-09 37.3 0.0 3.5e-09 36.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4520) Pro_isomerase PF00160.21 RKO91868.1 - 1.7e-45 155.1 0.1 1.9e-45 155.0 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Kelch_4 PF13418.6 RKO91869.1 - 2.1e-06 27.6 1.0 8.9e-06 25.6 0.0 2.2 2 0 0 2 2 2 1 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO91869.1 - 3.5e-06 27.1 0.2 7.1e-06 26.1 0.2 1.5 1 0 0 1 1 1 1 Kelch motif Kelch_1 PF01344.25 RKO91869.1 - 4.7e-05 22.9 0.0 4.7e-05 22.9 0.0 2.2 3 0 0 3 3 3 1 Kelch motif Kelch_5 PF13854.6 RKO91869.1 - 0.0095 15.9 0.0 0.018 15.0 0.0 1.5 1 0 0 1 1 1 1 Kelch motif Kelch_2 PF07646.15 RKO91869.1 - 0.021 14.8 0.0 0.042 13.9 0.0 1.4 1 0 0 1 1 1 0 Kelch motif ATP_bind_1 PF03029.17 RKO91870.1 - 2.3e-51 174.9 0.5 2.6e-51 174.7 0.5 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein SRP54 PF00448.22 RKO91870.1 - 4e-07 29.9 0.3 5.1e-05 23.0 0.0 2.3 2 1 0 2 2 2 1 SRP54-type protein, GTPase domain MMR_HSR1 PF01926.23 RKO91870.1 - 4.2e-06 26.8 0.1 0.002 18.2 0.0 2.1 1 1 0 2 2 2 1 50S ribosome-binding GTPase MipZ PF09140.11 RKO91870.1 - 1.6e-05 24.3 0.0 2e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 ATPase MipZ AAA_31 PF13614.6 RKO91870.1 - 2.2e-05 24.4 0.1 0.0028 17.6 0.1 2.2 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 RKO91870.1 - 3.3e-05 23.0 0.0 5.9e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB CLP1_P PF16575.5 RKO91870.1 - 6.1e-05 22.9 0.0 0.078 12.8 0.0 2.1 2 0 0 2 2 2 2 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_24 PF13479.6 RKO91870.1 - 0.00023 21.0 0.1 0.00031 20.5 0.1 1.1 1 0 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 RKO91870.1 - 0.00038 19.7 0.0 0.001 18.3 0.0 1.7 1 1 0 2 2 2 1 Anion-transporting ATPase KTI12 PF08433.10 RKO91870.1 - 0.00057 19.4 0.0 0.0016 18.0 0.0 1.7 2 0 0 2 2 2 1 Chromatin associated protein KTI12 AAA_16 PF13191.6 RKO91870.1 - 0.00085 19.7 0.0 0.001 19.5 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain cobW PF02492.19 RKO91870.1 - 0.0011 18.5 0.2 0.72 9.4 0.0 2.2 2 0 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 RKO91870.1 - 0.002 18.4 0.0 0.0024 18.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 RKO91870.1 - 0.0021 18.0 0.1 0.053 13.4 0.0 2.1 2 0 0 2 2 2 1 NTPase CbiA PF01656.23 RKO91870.1 - 0.0021 18.1 0.0 0.0021 18.1 0.0 1.2 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain APS_kinase PF01583.20 RKO91870.1 - 0.0028 17.6 0.0 0.0059 16.5 0.0 1.6 1 0 0 1 1 1 1 Adenylylsulphate kinase NACHT PF05729.12 RKO91870.1 - 0.0052 16.7 0.0 0.0085 16.0 0.0 1.3 1 0 0 1 1 1 1 NACHT domain AAA_33 PF13671.6 RKO91870.1 - 0.0064 16.7 0.0 0.0091 16.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 RKO91870.1 - 0.01 15.5 0.0 0.015 15.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain PRK PF00485.18 RKO91870.1 - 0.01 15.6 0.0 0.012 15.3 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Ras PF00071.22 RKO91870.1 - 0.014 15.0 0.3 3.1 7.4 0.2 2.2 2 0 0 2 2 2 0 Ras family Fer4_NifH PF00142.18 RKO91870.1 - 0.017 14.6 0.0 0.029 13.8 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_14 PF13173.6 RKO91870.1 - 0.03 14.4 0.0 0.048 13.7 0.0 1.5 1 1 0 1 1 1 0 AAA domain ATPase PF06745.13 RKO91870.1 - 0.032 13.6 0.2 0.072 12.4 0.0 1.6 2 0 0 2 2 2 0 KaiC Rad17 PF03215.15 RKO91870.1 - 0.034 14.1 0.2 0.15 12.0 0.0 2.0 2 1 0 2 2 2 0 Rad17 P-loop domain AAA_7 PF12775.7 RKO91870.1 - 0.036 13.6 0.0 0.072 12.6 0.0 1.6 2 0 0 2 2 2 0 P-loop containing dynein motor region Roc PF08477.13 RKO91870.1 - 0.038 14.2 0.2 3.7 7.8 0.0 2.1 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_18 PF13238.6 RKO91870.1 - 0.05 14.1 0.0 0.07 13.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 RKO91870.1 - 0.05 14.0 0.1 0.15 12.5 0.0 1.8 2 0 0 2 2 1 0 RNA helicase AAA_29 PF13555.6 RKO91870.1 - 0.052 13.3 0.1 0.28 11.0 0.0 2.2 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_5 PF07728.14 RKO91870.1 - 0.074 13.0 0.0 0.097 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Thymidylate_kin PF02223.17 RKO91870.1 - 0.097 12.3 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Thymidylate kinase G-alpha PF00503.20 RKO91870.1 - 0.18 11.0 2.3 0.51 9.4 0.1 2.3 1 1 0 2 2 2 0 G-protein alpha subunit RsgA_GTPase PF03193.16 RKO91870.1 - 0.18 11.7 2.0 3.6 7.5 0.0 2.9 3 1 0 3 3 3 0 RsgA GTPase Reeler PF02014.16 RKO91872.1 - 7.2e-09 36.5 0.1 1.5e-08 35.4 0.0 1.5 2 0 0 2 2 2 1 Reeler domain RT_RNaseH_2 PF17919.1 RKO91873.1 - 4.4e-12 45.9 0.0 4.7e-12 45.8 0.0 1.0 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase RT_RNaseH PF17917.1 RKO91873.1 - 7.4e-07 29.4 0.0 8.3e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase Integrase_H2C2 PF17921.1 RKO91876.1 - 0.00025 21.1 0.1 0.00079 19.5 0.0 1.8 2 0 0 2 2 2 1 Integrase zinc binding domain MARVEL PF01284.23 RKO91878.1 - 1.7e-07 31.3 13.7 2.5e-07 30.8 13.7 1.2 1 0 0 1 1 1 1 Membrane-associating domain Nepo_coat PF03391.15 RKO91878.1 - 0.13 11.7 0.9 0.21 11.0 0.9 1.3 1 0 0 1 1 1 0 Nepovirus coat protein, central domain IncD PF17628.2 RKO91879.1 - 0.036 13.8 0.3 0.065 13.0 0.3 1.4 1 1 0 1 1 1 0 Inclusion membrane protein D NmrA PF05368.13 RKO91881.1 - 3.7e-22 79.0 0.0 4.9e-22 78.6 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 RKO91881.1 - 9.5e-11 41.9 0.1 2.7e-10 40.4 0.1 1.8 1 1 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 RKO91881.1 - 0.0066 16.4 0.0 0.022 14.7 0.0 1.8 2 0 0 2 2 2 1 KR domain Barttin PF15462.6 RKO91882.1 - 0.15 11.8 0.2 0.47 10.2 0.1 1.7 2 0 0 2 2 2 0 Bartter syndrome, infantile, with sensorineural deafness (Barttin) Lipase_3 PF01764.25 RKO91883.1 - 3.9e-26 91.6 0.0 8.3e-26 90.5 0.0 1.5 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 RKO91883.1 - 7.8e-05 22.5 0.0 0.00014 21.7 0.0 1.3 1 0 0 1 1 1 1 PGAP1-like protein Abhydrolase_1 PF00561.20 RKO91883.1 - 0.0035 17.0 0.0 0.0068 16.1 0.0 1.5 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 RKO91883.1 - 0.011 15.0 0.0 0.019 14.2 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO91883.1 - 0.03 14.9 0.0 0.071 13.7 0.0 1.7 2 0 0 2 2 2 0 Alpha/beta hydrolase family DUF2974 PF11187.8 RKO91883.1 - 0.031 13.8 0.1 0.14 11.7 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2974) DUF2284 PF10050.9 RKO91884.1 - 0.11 12.3 0.1 0.16 11.7 0.1 1.2 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) Clathrin PF00637.20 RKO91885.1 - 3.3e-07 30.3 0.0 1.3e-06 28.3 0.0 2.0 3 0 0 3 3 3 1 Region in Clathrin and VPS Pinin_SDK_memA PF04696.13 RKO91886.1 - 2.4e-22 79.4 17.3 2.4e-22 79.4 17.3 2.1 2 0 0 2 2 2 1 pinin/SDK/memA/ protein conserved region DUF4407 PF14362.6 RKO91886.1 - 1 8.7 9.0 1.5 8.1 9.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Macoilin PF09726.9 RKO91887.1 - 5.7 5.4 13.0 14 4.1 13.1 1.4 1 1 0 1 1 1 0 Macoilin family HTH_Tnp_4 PF13613.6 RKO91888.1 - 0.028 14.2 0.0 0.043 13.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease PPR_2 PF13041.6 RKO91889.1 - 1.2e-14 54.3 0.0 1.8e-07 31.3 0.0 4.7 5 0 0 5 5 5 2 PPR repeat family PPR_3 PF13812.6 RKO91889.1 - 1e-09 38.3 0.0 8.4e-05 22.6 0.0 4.1 4 0 0 4 4 4 3 Pentatricopeptide repeat domain PPR PF01535.20 RKO91889.1 - 0.18 12.2 0.4 60 4.2 0.0 4.3 5 0 0 5 5 5 0 PPR repeat SAP PF02037.27 RKO91892.1 - 6.4e-13 48.1 0.3 6.4e-13 48.1 0.3 1.7 2 0 0 2 2 2 1 SAP domain Tho1_MOS11_C PF18592.1 RKO91892.1 - 0.0029 17.4 5.7 9.3 6.1 0.0 4.2 3 1 1 4 4 4 2 Tho1/MOS11 C-terminal domain DUF4093 PF13331.6 RKO91892.1 - 0.088 13.3 0.2 7.4 7.1 0.0 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4093) RUN PF02759.19 RKO91893.1 - 1.3e-13 51.1 0.1 5.3e-13 49.1 0.1 1.8 1 1 0 1 1 1 1 RUN domain Cupin_8 PF13621.6 RKO91894.1 - 3.3e-41 141.7 0.0 4.4e-41 141.3 0.0 1.1 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 RKO91894.1 - 0.0064 16.0 0.0 0.033 13.6 0.0 1.9 2 0 0 2 2 2 1 Cupin superfamily protein PGA2 PF07543.12 RKO91894.1 - 0.91 9.5 8.0 1.9 8.4 8.0 1.5 1 0 0 1 1 1 0 Protein trafficking PGA2 Fungal_trans PF04082.18 RKO91895.1 - 6.5e-10 38.5 0.0 7.9e-10 38.2 0.0 1.1 1 0 0 1 1 1 1 Fungal specific transcription factor domain Allexi_40kDa PF05549.11 RKO91897.1 - 0.0061 16.1 5.7 0.0094 15.5 5.7 1.2 1 0 0 1 1 1 1 Allexivirus 40kDa protein Fib_alpha PF08702.10 RKO91897.1 - 0.0094 16.1 2.3 0.016 15.4 2.3 1.4 1 0 0 1 1 1 1 Fibrinogen alpha/beta chain family Sugarporin_N PF11471.8 RKO91897.1 - 0.09 12.7 0.4 31 4.6 0.0 3.3 2 1 1 3 3 3 0 Maltoporin periplasmic N-terminal extension Retrotran_gag_2 PF14223.6 RKO91899.1 - 0.017 14.8 0.0 0.028 14.1 0.0 1.2 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type DUF2730 PF10805.8 RKO91900.1 - 0.1 12.7 0.0 7.4 6.7 0.0 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2730) DUF1664 PF07889.12 RKO91900.1 - 0.14 12.2 1.2 3.7 7.6 0.2 2.7 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) RNA_pol_Rpb1_2 PF00623.20 RKO91902.1 - 0.00012 22.3 0.0 0.00025 21.3 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNase_H PF00075.24 RKO91903.1 - 2e-07 31.3 0.0 0.015 15.5 0.0 2.3 1 1 1 2 2 2 2 RNase H SIR2 PF02146.17 RKO91904.1 - 2.5e-45 154.6 0.0 3.5e-45 154.1 0.0 1.2 1 0 0 1 1 1 1 Sir2 family DUF592 PF04574.13 RKO91904.1 - 0.00018 21.3 0.2 0.00031 20.6 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF592) Actin PF00022.19 RKO91905.1 - 2.1e-48 164.9 0.0 3.3e-48 164.3 0.0 1.2 1 0 0 1 1 1 1 Actin MreB_Mbl PF06723.13 RKO91905.1 - 0.00015 20.7 0.0 0.0053 15.6 0.0 2.2 2 0 0 2 2 2 1 MreB/Mbl protein FtsA PF14450.6 RKO91905.1 - 0.06 13.8 0.0 2.6 8.5 0.0 2.8 2 1 0 2 2 2 0 Cell division protein FtsA Como_SCP PF02248.16 RKO91905.1 - 0.24 10.9 0.1 0.42 10.2 0.1 1.3 1 0 0 1 1 1 0 Small coat protein CPSF_A PF03178.15 RKO91906.1 - 1.2e-17 64.3 0.0 1.4e-17 64.0 0.0 1.0 1 0 0 1 1 1 1 CPSF A subunit region GATase_2 PF00310.21 RKO91909.1 - 1.5e-177 590.6 0.0 1.9e-177 590.2 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Glu_synthase PF01645.17 RKO91909.1 - 2.2e-156 520.7 0.0 4e-155 516.5 0.0 2.6 2 1 1 3 3 3 1 Conserved region in glutamate synthase Glu_syn_central PF04898.14 RKO91909.1 - 1.5e-112 375.7 0.0 5.3e-111 370.6 0.0 2.2 2 0 0 2 2 2 1 Glutamate synthase central domain GXGXG PF01493.19 RKO91909.1 - 1.9e-87 291.8 5.5 3.3e-87 291.0 5.5 1.4 1 0 0 1 1 1 1 GXGXG motif Pyr_redox_2 PF07992.14 RKO91909.1 - 1.5e-24 86.7 0.0 3.6e-24 85.5 0.0 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_20 PF14691.6 RKO91909.1 - 5.2e-22 77.7 0.1 9.8e-22 76.9 0.1 1.5 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NAD_binding_8 PF13450.6 RKO91909.1 - 7.9e-09 35.6 0.0 3e-08 33.8 0.0 2.0 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 RKO91909.1 - 5.5e-07 30.0 1.4 0.0003 21.3 0.0 3.6 3 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 RKO91909.1 - 3.8e-06 26.7 0.1 0.0064 16.1 0.1 2.7 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 RKO91909.1 - 4.2e-06 26.4 0.1 8.9e-06 25.3 0.1 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase Amino_oxidase PF01593.24 RKO91909.1 - 4.2e-05 23.0 0.0 9.9e-05 21.8 0.0 1.6 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase HI0933_like PF03486.14 RKO91909.1 - 6.4e-05 21.8 1.3 7.6e-05 21.6 0.0 1.7 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_2 PF00890.24 RKO91909.1 - 9.1e-05 21.7 0.3 0.00067 18.9 0.1 2.4 2 0 0 2 2 2 1 FAD binding domain NAD_binding_7 PF13241.6 RKO91909.1 - 0.00018 21.9 0.0 0.58 10.6 0.1 2.9 3 0 0 3 3 2 2 Putative NAD(P)-binding FAD_binding_3 PF01494.19 RKO91909.1 - 0.00056 19.3 0.0 0.0011 18.3 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 RKO91909.1 - 0.001 18.4 0.2 0.058 12.6 0.0 2.5 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 RKO91909.1 - 0.0019 17.6 1.4 0.1 11.9 0.1 2.3 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 RKO91909.1 - 0.012 14.9 0.1 0.027 13.7 0.1 1.5 1 0 0 1 1 1 0 Thi4 family 2-Hacid_dh_C PF02826.19 RKO91909.1 - 0.013 14.9 0.1 0.2 11.0 0.0 2.7 3 0 0 3 3 3 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FMN_dh PF01070.18 RKO91909.1 - 0.025 13.6 1.3 0.18 10.8 1.5 2.2 2 0 0 2 2 2 0 FMN-dependent dehydrogenase GIDA PF01134.22 RKO91909.1 - 0.068 12.3 0.8 0.23 10.5 0.0 2.0 2 0 0 2 2 2 0 Glucose inhibited division protein A ApbA PF02558.16 RKO91909.1 - 0.091 12.4 0.0 0.21 11.2 0.0 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_9 PF13454.6 RKO91909.1 - 0.092 12.7 0.0 0.35 10.9 0.0 2.0 2 0 0 2 2 2 0 FAD-NAD(P)-binding NAD_Gly3P_dh_N PF01210.23 RKO91909.1 - 0.094 12.7 1.8 0.46 10.4 0.0 2.7 3 0 0 3 3 3 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.18 RKO91909.1 - 0.11 12.4 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 RKO91909.1 - 0.11 12.7 0.0 0.34 11.1 0.0 1.9 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase JHY PF15261.6 RKO91910.1 - 3.2e-07 31.1 5.4 5.4e-05 23.9 0.0 3.4 3 0 0 3 3 3 2 Jhy protein Flavodoxin_1 PF00258.25 RKO91911.1 - 0.098 12.9 0.1 0.29 11.3 0.1 1.9 2 0 0 2 2 2 0 Flavodoxin F-box-like PF12937.7 RKO91917.1 - 0.00012 21.8 0.6 0.00027 20.7 0.6 1.5 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO91917.1 - 0.13 12.1 0.2 0.26 11.2 0.2 1.5 1 0 0 1 1 1 0 F-box domain F-box-like PF12937.7 RKO91918.1 - 7.5e-05 22.6 0.2 0.00024 20.9 0.2 1.9 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO91918.1 - 0.1 12.5 0.1 0.24 11.3 0.1 1.7 1 0 0 1 1 1 0 F-box domain LRR_6 PF13516.6 RKO91918.1 - 0.54 10.4 1.9 26 5.2 0.1 3.7 3 0 0 3 3 3 0 Leucine Rich repeat OPT PF03169.15 RKO91920.1 - 1.2e-05 24.2 0.0 1.3e-05 24.1 0.0 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein DUF2929 PF11151.8 RKO91920.1 - 0.14 12.5 0.0 0.23 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2929) OPT PF03169.15 RKO91921.1 - 1.1e-136 457.1 38.7 1.2e-136 456.9 38.7 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein LHC PF00556.20 RKO91921.1 - 4.6 7.5 8.9 15 5.8 0.2 4.5 3 0 0 3 3 3 0 Antenna complex alpha/beta subunit HOOK PF05622.12 RKO91922.1 - 1.4e-49 168.9 36.8 1.7e-49 168.7 32.1 1.9 1 1 1 2 2 2 2 HOOK protein Rootletin PF15035.6 RKO91922.1 - 0.0019 18.2 19.5 0.0019 18.2 19.5 2.3 1 1 1 2 2 2 1 Ciliary rootlet component, centrosome cohesion DUF1664 PF07889.12 RKO91922.1 - 0.0063 16.5 19.0 0.068 13.2 1.4 3.5 1 1 1 3 3 3 2 Protein of unknown function (DUF1664) Takusan PF04822.13 RKO91922.1 - 0.011 15.6 2.3 0.011 15.6 2.3 2.7 3 1 0 3 3 3 0 Takusan BLOC1_2 PF10046.9 RKO91922.1 - 0.04 14.2 4.5 0.04 14.2 4.5 4.8 2 1 2 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Fib_alpha PF08702.10 RKO91922.1 - 0.042 14.0 20.3 0.053 13.7 5.9 3.5 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family NPV_P10 PF05531.12 RKO91922.1 - 0.056 13.9 6.0 3.5 8.2 0.6 4.0 1 1 3 4 4 4 0 Nucleopolyhedrovirus P10 protein CENP-F_leu_zip PF10473.9 RKO91922.1 - 0.065 13.2 46.3 0.24 11.4 15.8 4.0 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Sec20 PF03908.13 RKO91922.1 - 0.07 13.1 0.5 0.07 13.1 0.5 2.6 3 0 0 3 3 3 0 Sec20 GAS PF13851.6 RKO91922.1 - 0.074 12.4 36.9 0.24 10.7 14.2 3.2 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding Prominin PF05478.11 RKO91922.1 - 0.074 11.0 12.6 0.078 10.9 11.7 1.4 1 1 0 1 1 1 0 Prominin HMMR_N PF15905.5 RKO91922.1 - 0.1 12.0 30.6 29 4.0 30.6 2.8 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal ZapB PF06005.12 RKO91922.1 - 0.61 10.6 40.3 0.93 10.0 2.1 5.4 2 1 1 3 3 2 0 Cell division protein ZapB FliD_N PF02465.18 RKO91922.1 - 1 10.1 13.1 38 5.1 0.6 3.7 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus HSBP1 PF06825.12 RKO91922.1 - 1.1 9.2 6.6 0.19 11.6 0.7 2.8 3 0 0 3 3 3 0 Heat shock factor binding protein 1 Peptidase_S46 PF10459.9 RKO91922.1 - 1.3 7.6 17.8 1.5 7.3 17.8 1.2 1 0 0 1 1 1 0 Peptidase S46 DUF4201 PF13870.6 RKO91922.1 - 1.3 8.7 32.2 6.9 6.4 11.1 3.7 1 1 2 3 3 3 0 Domain of unknown function (DUF4201) KASH_CCD PF14662.6 RKO91922.1 - 1.7 8.4 39.0 0.99 9.2 4.1 4.0 2 1 1 3 3 3 0 Coiled-coil region of CCDC155 or KASH Laminin_II PF06009.12 RKO91922.1 - 3 7.8 17.2 0.94 9.5 2.2 3.5 1 1 3 4 4 4 0 Laminin Domain II Fez1 PF06818.15 RKO91922.1 - 3.3 8.1 32.5 6.2 7.2 17.9 2.4 1 1 1 2 2 2 0 Fez1 Mod_r PF07200.13 RKO91922.1 - 3.4 7.8 33.0 2 8.5 12.4 3.3 1 1 2 3 3 3 0 Modifier of rudimentary (Mod(r)) protein TRAF_BIRC3_bd PF16673.5 RKO91922.1 - 3.5 7.5 16.1 0.14 12.0 2.0 4.6 3 2 0 3 3 3 0 TNF receptor-associated factor BIRC3 binding domain NYD-SP28_assoc PF14775.6 RKO91922.1 - 4.2 7.5 15.0 3.9 7.6 1.9 4.1 3 2 2 5 5 5 0 Sperm tail C-terminal domain MutS_III PF05192.18 RKO91922.1 - 5.2 7.2 20.6 80 3.4 20.6 2.2 1 1 0 1 1 1 0 MutS domain III DUF2344 PF10105.9 RKO91922.1 - 8.3 6.2 9.9 1.9 8.3 5.8 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2344) HOOK PF05622.12 RKO91923.1 - 4e-07 28.6 10.1 2.5e-06 26.0 1.0 2.0 1 1 1 2 2 2 2 HOOK protein UPF0242 PF06785.11 RKO91923.1 - 0.00079 19.6 7.6 0.001 19.2 7.6 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Seryl_tRNA_N PF02403.22 RKO91923.1 - 0.0013 18.9 3.7 0.002 18.3 3.7 1.3 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Spc7 PF08317.11 RKO91923.1 - 0.0061 15.5 4.8 0.0081 15.1 4.8 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein CC2-LZ PF16516.5 RKO91923.1 - 0.012 15.9 5.0 0.016 15.6 1.3 2.1 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator MukF_M PF17192.4 RKO91923.1 - 0.023 14.4 2.6 0.024 14.4 0.7 1.8 1 1 1 2 2 2 0 MukF middle domain HMMR_N PF15905.5 RKO91923.1 - 0.029 13.8 7.1 0.042 13.3 7.1 1.3 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Phage_GP20 PF06810.11 RKO91923.1 - 0.053 13.3 4.2 0.085 12.7 4.2 1.4 1 1 0 1 1 1 0 Phage minor structural protein GP20 Golgin_A5 PF09787.9 RKO91923.1 - 0.061 12.8 8.0 0.074 12.5 8.0 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 DUF4407 PF14362.6 RKO91923.1 - 0.16 11.3 6.2 0.19 11.1 6.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF2203 PF09969.9 RKO91923.1 - 0.22 12.3 2.7 0.36 11.5 2.6 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) YabA PF06156.13 RKO91923.1 - 0.22 12.2 6.2 0.7 10.6 2.0 2.1 1 1 1 2 2 2 0 Initiation control protein YabA ZapB PF06005.12 RKO91923.1 - 0.37 11.2 10.2 0.37 11.3 0.9 2.3 1 1 1 2 2 2 0 Cell division protein ZapB Lebercilin PF15619.6 RKO91923.1 - 0.38 10.4 11.4 0.83 9.3 5.5 2.1 1 1 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease TMPIT PF07851.13 RKO91923.1 - 0.61 9.3 4.0 0.72 9.0 4.0 1.2 1 0 0 1 1 1 0 TMPIT-like protein Cep57_CLD_2 PF14197.6 RKO91923.1 - 0.92 9.6 6.7 3.3 7.9 6.7 2.0 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 CRR7 PF12095.8 RKO91923.1 - 1 9.8 4.9 5.9 7.4 1.1 2.2 1 1 1 2 2 2 0 Protein CHLORORESPIRATORY REDUCTION 7 GAS PF13851.6 RKO91923.1 - 1.1 8.6 8.8 3.5 6.9 8.8 1.8 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Uso1_p115_C PF04871.13 RKO91923.1 - 1.7 9.0 9.2 2.5 8.5 7.7 1.8 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region Tropomyosin_1 PF12718.7 RKO91923.1 - 1.7 8.8 9.4 4.5 7.4 6.5 2.2 1 1 1 2 2 2 0 Tropomyosin like GrpE PF01025.19 RKO91923.1 - 1.9 8.1 6.6 7.7 6.1 2.7 2.1 1 1 1 2 2 2 0 GrpE Sec2p PF06428.11 RKO91923.1 - 2.9 7.9 9.3 16 5.5 0.1 2.3 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p Cnn_1N PF07989.11 RKO91923.1 - 9.8 6.4 8.9 16 5.8 3.9 2.4 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Peptidase_M13_N PF05649.13 RKO91924.1 - 0.0031 17.3 0.1 1.4 8.5 0.0 2.1 2 0 0 2 2 2 2 Peptidase family M13 VAPB_antitox PF02697.14 RKO91924.1 - 0.11 13.2 0.0 28 5.6 0.0 2.4 2 0 0 2 2 2 0 Putative antitoxin HMG_box PF00505.19 RKO91925.1 - 2.7e-15 56.5 0.5 5.1e-15 55.7 0.5 1.4 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 RKO91925.1 - 4.4e-07 30.4 0.2 9.7e-07 29.3 0.2 1.6 1 0 0 1 1 1 1 HMG-box domain RIH_assoc PF08454.11 RKO91925.1 - 0.067 13.0 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 RyR and IP3R Homology associated FAP PF07174.11 RKO91925.1 - 2.3 7.6 22.6 0.43 10.0 17.3 2.0 2 0 0 2 2 2 0 Fibronectin-attachment protein (FAP) Pkinase PF00069.25 RKO91926.1 - 0.00091 18.7 0.0 0.0014 18.0 0.0 1.4 1 1 0 1 1 1 1 Protein kinase domain RRM_1 PF00076.22 RKO91927.1 - 0.072 12.9 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TPR_1 PF00515.28 RKO91929.1 - 3.9e-07 29.6 0.0 2e-05 24.2 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO91929.1 - 1.2e-05 25.7 0.2 3e-05 24.5 0.2 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_2 PF07719.17 RKO91929.1 - 1.6e-05 24.6 0.0 7.2e-05 22.6 0.0 2.0 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 RKO91929.1 - 7.5e-05 22.6 0.0 0.0002 21.3 0.0 1.8 2 0 0 2 2 1 1 Tetratricopeptide repeat TPR_7 PF13176.6 RKO91929.1 - 0.00041 20.2 0.7 0.0049 16.8 0.0 2.8 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO91929.1 - 0.00089 19.9 0.1 0.0013 19.4 0.1 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 RKO91929.1 - 0.016 15.6 0.1 0.016 15.6 0.1 3.3 4 0 0 4 4 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 RKO91929.1 - 0.017 14.8 0.1 0.038 13.7 0.1 1.8 1 0 0 1 1 1 0 TPR repeat DUF1387 PF07139.11 RKO91929.1 - 0.89 9.2 17.1 1.1 9.0 17.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1387) MMR1 PF08505.10 RKO91929.1 - 1.2 9.3 22.6 1.5 9.0 22.6 1.2 1 0 0 1 1 1 0 Mitochondrial Myo2 receptor-related protein Endostatin PF06482.11 RKO91929.1 - 1.7 8.0 16.8 1.8 8.0 16.8 1.2 1 0 0 1 1 1 0 Collagenase NC10 and Endostatin SpoIIP PF07454.11 RKO91929.1 - 2 7.8 14.6 2.8 7.3 14.6 1.3 1 0 0 1 1 1 0 Stage II sporulation protein P (SpoIIP) Tim54 PF11711.8 RKO91929.1 - 2.2 7.0 13.4 2.2 7.0 13.4 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Band_3_cyto PF07565.13 RKO91929.1 - 2.4 7.9 15.0 3.8 7.2 15.0 1.3 1 0 0 1 1 1 0 Band 3 cytoplasmic domain Sin_N PF04801.13 RKO91929.1 - 2.5 7.2 30.6 2.7 7.1 30.6 1.0 1 0 0 1 1 1 0 Sin-like protein conserved region FAM76 PF16046.5 RKO91929.1 - 2.6 7.3 17.9 3.1 7.1 17.9 1.1 1 0 0 1 1 1 0 FAM76 protein eIF-3_zeta PF05091.12 RKO91929.1 - 4 6.3 19.3 5.4 5.9 19.3 1.2 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) RR_TM4-6 PF06459.12 RKO91929.1 - 5.4 6.8 15.1 6.4 6.5 15.1 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Neur_chan_memb PF02932.16 RKO91929.1 - 5.5 7.0 15.5 6.2 6.8 15.5 1.1 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region FAM60A PF15396.6 RKO91929.1 - 5.6 6.9 10.9 6.5 6.7 10.9 1.2 1 0 0 1 1 1 0 Protein Family FAM60A Presenilin PF01080.17 RKO91929.1 - 5.9 5.5 20.0 7.2 5.3 20.0 1.1 1 0 0 1 1 1 0 Presenilin NST1 PF13945.6 RKO91929.1 - 6.1 6.9 23.3 7.4 6.6 23.3 1.2 1 0 0 1 1 1 0 Salt tolerance down-regulator Membralin PF09746.9 RKO91929.1 - 7.7 5.4 9.3 8 5.4 9.3 1.1 1 0 0 1 1 1 0 Tumour-associated protein Lin-8 PF03353.15 RKO91929.1 - 8.2 5.9 23.3 11 5.5 23.3 1.2 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist Sec62 PF03839.16 RKO91929.1 - 9.7 5.6 16.7 12 5.3 16.7 1.1 1 0 0 1 1 1 0 Translocation protein Sec62 DUF563 PF04577.14 RKO91931.1 - 4.3e-23 82.6 0.5 9e-23 81.5 0.3 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF563) DNA_pol_viral_N PF00242.17 RKO91931.1 - 0.18 11.2 0.0 0.28 10.6 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase (viral) N-terminal domain DUF5402 PF17393.2 RKO91932.1 - 0.18 11.8 0.0 0.37 10.7 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5402) DDE_Tnp_1_7 PF13843.6 RKO91933.1 - 1.3e-05 24.7 0.3 0.015 14.6 0.1 2.2 1 1 1 2 2 2 2 Transposase IS4 2-Hacid_dh_C PF02826.19 RKO91934.1 - 9.9e-54 181.4 0.0 1.6e-53 180.7 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 RKO91934.1 - 4.7e-34 116.9 0.0 6.4e-34 116.5 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 RKO91934.1 - 2.3e-06 27.9 0.1 5.6e-06 26.6 0.1 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 RKO91934.1 - 0.012 15.4 0.2 0.91 9.4 0.1 2.6 1 1 1 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RbsD_FucU PF05025.13 RKO91934.1 - 0.051 14.0 0.0 0.11 12.9 0.0 1.5 1 0 0 1 1 1 0 RbsD / FucU transport protein family XdhC_C PF13478.6 RKO91934.1 - 0.052 14.1 0.0 0.26 11.8 0.0 2.2 3 0 0 3 3 3 0 XdhC Rossmann domain ACT PF01842.25 RKO91934.1 - 0.11 12.3 0.0 0.33 10.8 0.0 2.0 1 1 0 1 1 1 0 ACT domain WD40 PF00400.32 RKO91935.1 - 2.3e-21 75.7 15.4 3.8e-05 24.3 0.0 5.1 5 0 0 5 5 5 4 WD domain, G-beta repeat Nup160 PF11715.8 RKO91935.1 - 1.7e-06 27.0 2.3 0.003 16.3 0.0 2.9 1 1 1 3 3 3 2 Nucleoporin Nup120/160 PALB2_WD40 PF16756.5 RKO91935.1 - 0.02 13.8 0.1 2.7 6.8 0.0 2.2 2 0 0 2 2 2 0 Partner and localizer of BRCA2 WD40 domain 2-oxoacid_dh PF00198.23 RKO91936.1 - 2.8e-11 43.3 0.0 5.8e-10 39.0 0.0 2.5 1 1 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) E3_binding PF02817.17 RKO91936.1 - 0.00054 20.2 0.4 0.005 17.1 0.0 2.6 2 0 0 2 2 2 1 e3 binding domain V_ATPase_I_N PF18670.1 RKO91936.1 - 0.046 14.1 0.2 6 7.3 0.0 2.6 2 0 0 2 2 2 0 V-type ATPase subunit I, N-terminal domain ParA PF10609.9 RKO91937.1 - 5.7e-102 340.4 0.0 6.5e-102 340.2 0.0 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 RKO91937.1 - 9.8e-13 48.3 0.0 2.5e-12 47.0 0.0 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 RKO91937.1 - 5.8e-11 42.6 0.3 6.8e-10 39.1 0.3 2.0 1 1 0 1 1 1 1 AAA domain MipZ PF09140.11 RKO91937.1 - 3.6e-09 36.3 0.0 1.2e-08 34.6 0.0 1.7 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 RKO91937.1 - 5.5e-08 32.4 1.1 7e-07 28.7 0.2 2.4 2 1 1 3 3 3 1 Anion-transporting ATPase MeaB PF03308.16 RKO91937.1 - 5.6e-06 25.5 0.2 8.8e-06 24.9 0.2 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 RKO91937.1 - 4.7e-05 23.0 0.1 7.9e-05 22.3 0.1 1.3 1 0 0 1 1 1 1 AAA domain CBP_BcsQ PF06564.12 RKO91937.1 - 0.00012 21.7 0.1 0.0003 20.4 0.1 1.6 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 RKO91937.1 - 0.0004 19.9 0.0 0.0011 18.5 0.0 1.6 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family APS_kinase PF01583.20 RKO91937.1 - 0.0008 19.3 0.1 0.0012 18.7 0.1 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase CLP1_P PF16575.5 RKO91937.1 - 0.0025 17.6 0.0 0.0057 16.5 0.0 1.6 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_26 PF13500.6 RKO91937.1 - 0.0037 17.1 0.1 1.1 9.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 RKO91937.1 - 0.0038 16.5 0.0 0.0061 15.9 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin NB-ARC PF00931.22 RKO91937.1 - 0.0056 15.9 0.2 0.01 15.0 0.2 1.4 1 0 0 1 1 1 1 NB-ARC domain SRP54 PF00448.22 RKO91937.1 - 0.0062 16.2 0.1 0.041 13.5 0.1 2.0 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_22 PF13401.6 RKO91937.1 - 0.011 16.0 0.0 0.064 13.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain VirC1 PF07015.11 RKO91937.1 - 0.015 14.6 0.0 0.045 13.0 0.0 1.7 2 0 0 2 2 2 0 VirC1 protein AAA_16 PF13191.6 RKO91937.1 - 0.017 15.5 0.4 0.03 14.7 0.4 1.5 1 1 0 1 1 1 0 AAA ATPase domain KTI12 PF08433.10 RKO91937.1 - 0.035 13.6 0.1 0.052 13.0 0.1 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 IstB_IS21 PF01695.17 RKO91937.1 - 0.047 13.4 0.1 0.085 12.6 0.1 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein TrwB_AAD_bind PF10412.9 RKO91937.1 - 0.048 12.6 0.1 0.34 9.8 0.1 1.9 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain RNA_helicase PF00910.22 RKO91937.1 - 0.05 14.0 0.0 0.13 12.7 0.0 1.7 2 0 0 2 2 1 0 RNA helicase RsgA_GTPase PF03193.16 RKO91937.1 - 0.056 13.4 0.6 0.11 12.4 0.3 1.6 2 0 0 2 2 1 0 RsgA GTPase AAA_33 PF13671.6 RKO91937.1 - 0.067 13.4 0.1 0.18 12.0 0.1 1.7 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 RKO91937.1 - 0.1 12.5 0.6 0.23 11.4 0.6 1.5 1 0 0 1 1 1 0 NACHT domain NTPase_1 PF03266.15 RKO91937.1 - 0.11 12.3 0.4 0.24 11.3 0.4 1.5 1 0 0 1 1 1 0 NTPase MobB PF03205.14 RKO91937.1 - 0.12 12.3 0.1 0.23 11.4 0.1 1.5 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_30 PF13604.6 RKO91937.1 - 0.13 12.0 0.1 0.2 11.3 0.1 1.4 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 RKO91937.1 - 0.14 12.3 0.2 21 5.3 0.1 2.2 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_24 PF13479.6 RKO91937.1 - 0.18 11.5 0.0 0.3 10.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 RKO91937.1 - 0.24 11.9 0.3 0.35 11.4 0.3 1.5 1 1 0 1 1 1 0 AAA domain Ferric_reduct PF01794.19 RKO91938.1 - 3e-19 69.4 9.1 1.1e-18 67.6 7.3 2.5 2 0 0 2 2 2 1 Ferric reductase like transmembrane component FAD_binding_8 PF08022.12 RKO91938.1 - 4.2e-19 68.6 0.0 9.5e-19 67.5 0.0 1.6 1 0 0 1 1 1 1 FAD-binding domain NAD_binding_6 PF08030.12 RKO91938.1 - 4.4e-14 52.9 0.0 1.5e-13 51.1 0.0 1.9 1 1 0 1 1 1 1 Ferric reductase NAD binding domain NAD_binding_1 PF00175.21 RKO91938.1 - 8.6e-05 23.2 0.0 0.038 14.6 0.0 2.3 2 0 0 2 2 2 2 Oxidoreductase NAD-binding domain DUF4405 PF14358.6 RKO91938.1 - 0.36 11.4 9.9 1.2 9.7 0.6 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) TFIIS_C PF01096.18 RKO91940.1 - 5.3e-17 61.4 1.4 5.3e-17 61.4 1.4 2.8 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 RKO91940.1 - 2.5e-08 33.6 8.3 2.5e-06 27.3 0.2 3.0 3 0 0 3 3 3 2 RNA polymerases M/15 Kd subunit DZR PF12773.7 RKO91940.1 - 8.6e-05 22.5 6.5 0.018 15.0 0.2 3.0 2 1 0 2 2 2 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 RKO91940.1 - 0.00086 18.9 9.7 0.58 10.0 0.1 4.3 4 0 0 4 4 4 1 zinc-ribbon domain CpXC PF14353.6 RKO91940.1 - 0.0052 16.8 4.0 0.39 10.8 0.2 3.7 3 1 1 4 4 4 1 CpXC protein A2L_zn_ribbon PF08792.10 RKO91940.1 - 0.0056 16.4 5.4 3 7.7 0.1 4.0 4 0 0 4 4 4 1 A2L zinc ribbon domain Baculo_LEF5_C PF11792.8 RKO91940.1 - 0.0076 15.9 1.2 0.0076 15.9 1.2 2.2 2 1 0 2 2 1 1 Baculoviridae late expression factor 5 C-terminal domain zf-ribbon_3 PF13248.6 RKO91940.1 - 0.012 15.0 16.1 0.16 11.4 2.4 4.4 3 2 0 3 3 3 0 zinc-ribbon domain Ogr_Delta PF04606.12 RKO91940.1 - 0.014 15.3 5.0 0.09 12.8 0.8 2.5 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger C1_1 PF00130.22 RKO91940.1 - 0.014 15.2 3.2 0.18 11.7 0.0 2.4 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) TF_Zn_Ribbon PF08271.12 RKO91940.1 - 0.018 14.6 14.5 0.41 10.2 4.4 3.3 2 2 0 2 2 2 0 TFIIB zinc-binding zf-C4_Topoisom PF01396.19 RKO91940.1 - 0.018 14.8 11.7 2 8.3 3.0 3.8 3 1 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf-RING_7 PF02591.15 RKO91940.1 - 0.019 15.1 3.6 0.046 13.9 0.0 3.0 3 0 0 3 3 3 0 C4-type zinc ribbon domain TackOD1 PF18551.1 RKO91940.1 - 0.027 14.2 1.4 3.8 7.1 0.1 2.2 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 Rpr2 PF04032.16 RKO91940.1 - 0.03 14.6 1.5 1.5 9.1 1.5 2.7 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Ribosomal_S27e PF01667.17 RKO91940.1 - 0.037 13.7 12.8 2.2 8.0 2.9 3.8 2 2 1 3 3 3 0 Ribosomal protein S27 Lar_restr_allev PF14354.6 RKO91940.1 - 0.045 14.1 8.4 0.1 13.0 0.8 2.8 2 1 0 2 2 2 0 Restriction alleviation protein Lar Zn_ribbon_recom PF13408.6 RKO91940.1 - 0.065 13.8 3.8 5.7 7.5 0.0 2.9 3 1 0 3 3 3 0 Recombinase zinc beta ribbon domain Zn-ribbon_8 PF09723.10 RKO91940.1 - 0.075 13.2 12.7 3.4 7.8 2.7 4.1 3 1 1 4 4 4 0 Zinc ribbon domain eIF-5_eIF-2B PF01873.17 RKO91940.1 - 0.084 12.7 3.3 0.58 10.1 0.6 2.2 2 0 0 2 2 2 0 Domain found in IF2B/IF5 zinc_ribbon_9 PF14369.6 RKO91940.1 - 0.1 12.9 4.8 8.6 6.7 0.0 3.8 4 0 0 4 4 4 0 zinc-ribbon DUF2387 PF09526.10 RKO91940.1 - 0.13 12.4 2.1 0.4 10.9 0.7 2.2 2 0 0 2 2 2 0 Probable metal-binding protein (DUF2387) DUF1178 PF06676.11 RKO91940.1 - 0.22 11.9 1.8 1 9.7 0.3 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1178) zf-H2C2_2 PF13465.6 RKO91940.1 - 0.25 11.9 7.5 5.4 7.6 0.1 4.0 4 0 0 4 4 4 0 Zinc-finger double domain Zn_Tnp_IS1 PF03811.13 RKO91940.1 - 0.35 10.6 3.6 1.3 8.8 0.0 2.8 3 0 0 3 3 2 0 InsA N-terminal domain LisH_2 PF16045.5 RKO91940.1 - 0.41 9.7 0.1 0.41 9.7 0.1 1.8 2 0 0 2 2 2 0 LisH C1_2 PF03107.16 RKO91940.1 - 0.51 10.7 5.2 17 5.8 0.3 3.0 3 0 0 3 3 3 0 C1 domain OrfB_Zn_ribbon PF07282.11 RKO91940.1 - 0.52 10.3 0.1 0.52 10.3 0.1 2.8 2 1 0 2 2 2 0 Putative transposase DNA-binding domain zinc_ribbon_4 PF13717.6 RKO91940.1 - 0.6 10.1 8.4 26 4.9 0.1 4.0 4 0 0 4 4 4 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 RKO91940.1 - 0.74 9.8 7.9 1.5 8.8 0.4 2.8 2 1 1 3 3 3 0 Transposase zinc-ribbon domain DUF35_N PF12172.8 RKO91940.1 - 1.3 9.0 6.5 21 5.1 0.1 3.7 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Auto_anti-p27 PF06677.12 RKO91940.1 - 1.6 8.9 10.9 1.2 9.3 1.6 3.3 2 2 2 4 4 4 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-TFIIB PF13453.6 RKO91940.1 - 3.3 7.1 10.4 0.55 9.6 0.9 2.7 2 1 0 2 2 2 0 Transcription factor zinc-finger GFA PF04828.14 RKO91940.1 - 4.7 7.6 7.1 13 6.3 0.1 3.5 1 1 3 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme Nop10p PF04135.12 RKO91940.1 - 6 7.0 8.1 1.1 9.3 0.2 3.1 2 2 2 4 4 4 0 Nucleolar RNA-binding protein, Nop10p family Zn_ribbon_SprT PF17283.2 RKO91940.1 - 6.8 6.7 10.5 1.3 9.0 0.9 3.2 3 1 0 3 3 3 0 SprT-like zinc ribbon domain Prok-RING_1 PF14446.6 RKO91940.1 - 9.6 6.2 13.2 7.1 6.7 0.2 3.6 3 1 1 4 4 4 0 Prokaryotic RING finger family 1 GCP_N_terminal PF17681.1 RKO91941.1 - 6.4e-85 285.4 0.0 9.2e-85 284.9 0.0 1.2 1 0 0 1 1 1 1 Gamma tubulin complex component N-terminal GCP_C_terminal PF04130.13 RKO91941.1 - 1.2e-65 222.0 1.6 3.9e-65 220.4 0.5 2.0 2 0 0 2 2 2 1 Gamma tubulin complex component C-terminal TetR_C_11 PF16859.5 RKO91941.1 - 0.032 14.5 0.0 0.13 12.6 0.0 2.0 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain GTP_EFTU PF00009.27 RKO91942.1 - 3.2e-40 137.7 0.0 5.4e-40 137.0 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 RKO91942.1 - 8.8e-21 73.7 0.0 2e-20 72.6 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus LepA_C PF06421.12 RKO91942.1 - 1.9e-16 60.1 0.1 3.1e-16 59.5 0.1 1.3 1 0 0 1 1 1 1 GTP-binding protein LepA C-terminus GTP_EFTU_D2 PF03144.25 RKO91942.1 - 1.7e-08 34.7 0.0 3.2e-08 33.8 0.0 1.5 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_II PF14492.6 RKO91942.1 - 2.1e-05 24.5 0.0 5.7e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II RF3_C PF16658.5 RKO91942.1 - 0.00025 20.9 0.0 0.0005 19.9 0.0 1.4 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain SRPRB PF09439.10 RKO91942.1 - 0.00088 18.8 0.0 0.0016 17.9 0.0 1.4 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 RKO91942.1 - 0.0094 15.6 0.0 0.023 14.3 0.0 1.6 1 0 0 1 1 1 1 Ras family Acyltransferase PF01553.21 RKO91943.1 - 1e-07 31.6 0.0 3.2e-07 30.0 0.0 1.8 2 0 0 2 2 2 1 Acyltransferase Trep_Strep PF09605.10 RKO91943.1 - 0.047 13.7 2.9 0.088 12.8 2.9 1.4 1 0 0 1 1 1 0 Hypothetical bacterial integral membrane protein (Trep_Strep) ATP_bind_1 PF03029.17 RKO91944.1 - 4.3e-65 219.9 0.3 4.8e-65 219.7 0.3 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 RKO91944.1 - 0.047 13.2 0.2 0.18 11.3 0.2 1.9 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain TIG PF01833.24 RKO91945.1 - 2.2e-12 46.9 1.2 8.9e-12 44.9 0.1 2.4 2 0 0 2 2 2 1 IPT/TIG domain LRR_8 PF13855.6 RKO91945.1 - 1.2e-05 25.0 0.4 0.0091 15.7 0.1 2.6 3 0 0 3 3 3 2 Leucine rich repeat EGF_Tenascin PF18720.1 RKO91945.1 - 0.00022 21.2 10.4 0.00056 19.9 10.4 1.8 1 0 0 1 1 1 1 Tenascin EGF domain EGF_2 PF07974.13 RKO91945.1 - 0.00073 19.9 12.2 0.0024 18.2 12.2 2.0 1 0 0 1 1 1 1 EGF-like domain LRR_1 PF00560.33 RKO91945.1 - 0.037 14.5 0.6 1.2 9.9 0.1 3.4 3 0 0 3 3 3 0 Leucine Rich Repeat LRR_6 PF13516.6 RKO91945.1 - 0.05 13.7 0.7 1.4 9.2 0.1 2.7 2 0 0 2 2 2 0 Leucine Rich repeat I-EGF_1 PF18372.1 RKO91945.1 - 0.79 9.9 5.8 1.9 8.6 5.8 1.7 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 hEGF PF12661.7 RKO91945.1 - 1.7 9.4 12.8 0.17 12.6 6.4 2.9 3 0 0 3 3 3 0 Human growth factor-like EGF EB PF01683.18 RKO91945.1 - 2.6 8.4 7.3 11 6.4 7.3 2.0 1 0 0 1 1 1 0 EB module Kelch_4 PF13418.6 RKO91948.1 - 3.8e-18 65.2 11.2 8.7e-07 28.9 0.9 4.6 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO91948.1 - 5e-18 64.7 9.4 7.1e-08 32.5 0.3 4.5 4 1 1 5 5 5 3 Kelch motif Kelch_1 PF01344.25 RKO91948.1 - 7.2e-18 63.9 0.3 3.5e-11 42.5 0.2 3.0 2 0 0 2 2 2 2 Kelch motif Kelch_3 PF13415.6 RKO91948.1 - 1.5e-16 60.2 14.4 5.2e-08 33.0 1.1 4.8 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO91948.1 - 7.8e-14 51.3 0.9 6.7e-05 22.8 0.1 3.8 3 0 0 3 3 3 2 Kelch motif Kelch_2 PF07646.15 RKO91948.1 - 6.6e-10 38.6 1.0 5.8e-09 35.6 0.2 3.0 3 0 0 3 3 3 1 Kelch motif Phage_Coat_B PF05356.11 RKO91948.1 - 0.25 11.3 1.2 0.65 9.9 0.1 2.3 2 0 0 2 2 2 0 Phage Coat protein B ERG4_ERG24 PF01222.17 RKO91949.1 - 9.3e-145 482.7 2.2 1.1e-144 482.4 2.2 1.0 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family DUF1295 PF06966.12 RKO91949.1 - 8.2e-06 25.5 1.4 2.1e-05 24.2 1.1 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF1295) DUF4602 PF15375.6 RKO91951.1 - 8.7e-12 45.5 23.1 8.7e-12 45.5 23.1 3.3 1 1 1 2 2 2 1 Domain of unknown function (DUF4602) Solute_trans_a PF03619.16 RKO91952.1 - 3.3e-24 85.8 2.4 3.9e-24 85.6 2.4 1.1 1 0 0 1 1 1 1 Organic solute transporter Ostalpha Acetyltransf_1 PF00583.25 RKO91954.1 - 0.012 15.8 0.0 0.031 14.5 0.0 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 RKO91954.1 - 0.12 12.8 0.0 0.24 11.8 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 RKO91954.1 - 0.25 11.3 0.0 0.42 10.6 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain CNH PF00780.22 RKO91955.1 - 0.17 11.4 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 CNH domain UBM PF14377.6 RKO91956.1 - 0.034 13.6 0.8 0.12 11.9 0.8 2.0 1 0 0 1 1 1 0 Ubiquitin binding region PRODH PF18327.1 RKO91956.1 - 0.099 12.9 0.6 0.22 11.8 0.6 1.5 1 0 0 1 1 1 0 Proline utilization A proline dehydrogenase N-terminal domain WD40 PF00400.32 RKO91957.1 - 6e-09 36.4 2.1 0.014 16.3 0.0 4.5 4 0 0 4 4 4 2 WD domain, G-beta repeat Nup160 PF11715.8 RKO91957.1 - 0.12 11.0 0.0 1.6 7.3 0.0 2.3 3 0 0 3 3 3 0 Nucleoporin Nup120/160 Exo_endo_phos PF03372.23 RKO91958.1 - 1.7e-17 63.8 0.3 3.2e-17 62.8 0.3 1.5 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family zf-GRF PF06839.12 RKO91958.1 - 4.7e-08 33.0 4.0 2.3e-07 30.8 4.0 2.1 1 1 0 1 1 1 1 GRF zinc finger Exo_endo_phos_2 PF14529.6 RKO91958.1 - 0.0095 15.8 0.0 3.5 7.5 0.0 2.4 2 0 0 2 2 2 2 Endonuclease-reverse transcriptase THOC2_N PF16134.5 RKO91960.1 - 1.5e-134 450.0 0.0 2.2e-134 449.5 0.0 1.2 1 0 0 1 1 1 1 THO complex subunit 2 N-terminus Tho2 PF11262.8 RKO91960.1 - 1.5e-48 165.5 0.1 3.1e-48 164.5 0.1 1.5 1 0 0 1 1 1 1 Transcription factor/nuclear export subunit protein 2 Thoc2 PF11732.8 RKO91960.1 - 1.9e-26 91.9 0.2 3.9e-26 90.9 0.2 1.6 1 0 0 1 1 1 1 Transcription- and export-related complex subunit zf-RanBP PF00641.18 RKO91961.1 - 8.3e-21 73.0 22.2 4.8e-07 29.0 1.7 3.3 3 0 0 3 3 3 3 Zn-finger in Ran binding protein and others RNase_T PF00929.24 RKO91961.1 - 5.2e-14 53.1 0.0 7.8e-14 52.5 0.0 1.3 1 0 0 1 1 1 1 Exonuclease RRM_1 PF00076.22 RKO91961.1 - 0.00019 21.2 0.0 0.00052 19.8 0.0 1.8 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Glyco_transf_15 PF01793.16 RKO91962.1 - 6.8e-80 268.8 0.0 7.6e-80 268.6 0.0 1.0 1 0 0 1 1 1 1 Glycolipid 2-alpha-mannosyltransferase Peptidase_C50 PF03568.17 RKO91964.1 - 1.9e-125 419.1 0.0 2.2e-125 418.9 0.0 1.0 1 0 0 1 1 1 1 Peptidase family C50 CHAT PF12770.7 RKO91964.1 - 9.6e-07 28.5 0.0 0.00022 20.8 0.0 2.2 1 1 0 1 1 1 1 CHAT domain TAP42 PF04177.12 RKO91964.1 - 0.19 10.8 0.1 0.26 10.4 0.1 1.1 1 0 0 1 1 1 0 TAP42-like family Oxidored-like PF09791.9 RKO91965.1 - 0.082 12.6 0.2 0.082 12.6 0.2 2.0 2 0 0 2 2 2 0 Oxidoreductase-like protein, N-terminal NTR2 PF15458.6 RKO91967.1 - 0.024 14.2 1.9 0.028 14.0 1.9 1.1 1 0 0 1 1 1 0 Nineteen complex-related protein 2 AT_hook PF02178.19 RKO91968.1 - 0.0031 17.2 3.0 0.012 15.3 3.0 2.1 1 0 0 1 1 1 1 AT hook motif Nop14 PF04147.12 RKO91968.1 - 0.4 8.9 19.1 0.52 8.5 19.1 1.1 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 RKO91968.1 - 0.78 8.0 13.6 1.1 7.4 13.6 1.2 1 0 0 1 1 1 0 CDC45-like protein TFIIF_alpha PF05793.12 RKO91968.1 - 3 6.4 22.3 4.1 5.9 22.3 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Nucleo_P87 PF07267.11 RKO91968.1 - 8.1 5.2 10.7 12 4.6 10.7 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 Skp1_POZ PF03931.15 RKO91969.1 - 6.9e-12 45.4 0.1 2e-10 40.7 0.0 2.2 2 0 0 2 2 2 1 Skp1 family, tetramerisation domain Rif1_N PF12231.8 RKO91969.1 - 0.0023 17.0 0.0 0.0025 16.9 0.0 1.0 1 0 0 1 1 1 1 Rap1-interacting factor 1 N terminal BTB PF00651.31 RKO91969.1 - 0.0035 17.6 0.0 0.0045 17.2 0.0 1.3 1 0 0 1 1 1 1 BTB/POZ domain PepSY_like PF11396.8 RKO91969.1 - 0.11 13.1 0.0 0.14 12.7 0.0 1.2 1 0 0 1 1 1 0 Putative beta-lactamase-inhibitor-like, PepSY-like BRO1 PF03097.18 RKO91970.1 - 7.7e-129 429.9 7.4 1.2e-128 429.2 7.4 1.3 1 0 0 1 1 1 1 BRO1-like domain ALIX_LYPXL_bnd PF13949.6 RKO91970.1 - 2.6e-58 197.7 4.9 5.5e-58 196.6 4.9 1.6 1 0 0 1 1 1 1 ALIX V-shaped domain binding to HIV DUF999 PF06198.11 RKO91970.1 - 0.085 12.9 0.2 0.25 11.3 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF999) Sec8_exocyst PF04048.14 RKO91970.1 - 0.14 12.1 6.8 0.38 10.6 0.0 3.9 4 0 0 4 4 4 0 Sec8 exocyst complex component specific domain Ku_C PF03730.14 RKO91970.1 - 0.24 12.1 4.1 0.4 11.4 0.2 3.3 3 0 0 3 3 3 0 Ku70/Ku80 C-terminal arm Phage_GP20 PF06810.11 RKO91970.1 - 0.52 10.1 3.9 1.9 8.3 0.0 3.4 1 1 2 3 3 3 0 Phage minor structural protein GP20 FlgN PF05130.12 RKO91970.1 - 0.63 10.5 16.4 0.54 10.8 2.7 3.4 2 1 1 3 3 3 0 FlgN protein TFIIA PF03153.13 RKO91970.1 - 1.7 8.6 23.7 3.8 7.4 23.7 1.7 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Choline_transpo PF04515.12 RKO91972.1 - 0.00088 18.6 5.3 0.0011 18.2 5.3 1.1 1 0 0 1 1 1 1 Plasma-membrane choline transporter Wzz PF02706.15 RKO91972.1 - 0.24 11.7 3.3 2.1 8.7 0.2 2.3 2 0 0 2 2 2 0 Chain length determinant protein MoaE PF02391.17 RKO91973.1 - 6.1e-35 119.9 0.0 6.9e-35 119.7 0.0 1.0 1 0 0 1 1 1 1 MoaE protein PAS_12 PF18095.1 RKO91973.1 - 0.1 12.2 0.0 0.28 10.8 0.0 1.7 2 0 0 2 2 2 0 UPF0242 C-terminal PAS-like domain LRR_8 PF13855.6 RKO91974.1 - 6.4e-06 25.8 0.4 1.4e-05 24.7 0.1 1.7 2 0 0 2 2 2 1 Leucine rich repeat LRR_4 PF12799.7 RKO91974.1 - 0.00015 22.0 2.0 0.00017 21.9 0.4 1.8 2 0 0 2 2 2 1 Leucine Rich repeats (2 copies) CSTF_C PF14304.6 RKO91974.1 - 0.071 12.7 3.8 0.1 12.2 0.5 2.1 2 0 0 2 2 2 0 Transcription termination and cleavage factor C-terminal LRR_6 PF13516.6 RKO91974.1 - 0.083 13.0 0.1 0.083 13.0 0.1 2.5 3 0 0 3 3 3 0 Leucine Rich repeat LRR_1 PF00560.33 RKO91974.1 - 0.091 13.4 4.2 4 8.4 0.1 3.2 2 1 0 2 2 2 0 Leucine Rich Repeat DDOST_48kD PF03345.14 RKO91975.1 - 1.1e-133 446.1 0.0 1.2e-133 446.0 0.0 1.0 1 0 0 1 1 1 1 Oligosaccharyltransferase 48 kDa subunit beta Ferritin_2 PF13668.6 RKO91976.1 - 1.6e-35 122.2 1.7 2e-35 121.9 1.7 1.0 1 0 0 1 1 1 1 Ferritin-like domain DUF4439 PF14530.6 RKO91976.1 - 0.0055 17.4 0.0 0.0087 16.7 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4439) SDA1 PF05285.12 RKO91977.1 - 0.26 10.7 8.8 0.5 9.7 8.8 1.5 1 0 0 1 1 1 0 SDA1 DNA_pol_phi PF04931.13 RKO91977.1 - 0.27 9.3 8.9 0.37 8.9 8.9 1.1 1 0 0 1 1 1 0 DNA polymerase phi Presenilin PF01080.17 RKO91977.1 - 8.8 5.0 6.6 15 4.2 6.6 1.3 1 0 0 1 1 1 0 Presenilin SET PF00856.28 RKO91978.1 - 3.3e-11 43.9 0.0 4.2e-11 43.5 0.0 1.3 1 1 0 1 1 1 1 SET domain Trimer_CC PF08954.11 RKO91979.1 - 0.09 12.3 0.1 8.4 6.0 0.0 2.2 2 0 0 2 2 2 0 Trimerisation motif SH3_9 PF14604.6 RKO91980.1 - 1.7e-06 27.8 0.0 3e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO91980.1 - 1.2e-05 24.8 0.0 1.8e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 SH3 domain RIFIN PF02009.16 RKO91980.1 - 0.0011 19.0 0.0 0.0018 18.3 0.0 1.2 1 0 0 1 1 1 1 Rifin Gemini_mov PF01708.16 RKO91980.1 - 0.072 12.9 0.4 0.17 11.7 0.4 1.6 1 0 0 1 1 1 0 Geminivirus putative movement protein SKG6 PF08693.10 RKO91980.1 - 0.36 10.3 5.4 0.088 12.2 0.6 2.3 2 0 0 2 2 2 0 Transmembrane alpha-helix domain PAN_3 PF08277.12 RKO91980.1 - 1.3 8.9 5.3 16 5.4 0.0 2.5 1 1 1 2 2 2 0 PAN-like domain Ank_2 PF12796.7 RKO91982.1 - 0.0022 18.6 0.0 0.0049 17.4 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO91982.1 - 0.0041 17.4 0.1 0.025 14.9 0.1 2.1 1 1 1 2 2 2 1 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO91982.1 - 0.11 13.1 0.0 0.32 11.6 0.0 1.8 1 1 0 1 1 1 0 Ankyrin repeats (many copies) Thg1C PF14413.6 RKO91985.1 - 0.12 12.5 0.0 0.22 11.7 0.0 1.5 1 1 0 1 1 1 0 Thg1 C terminal domain D5_N PF08706.11 RKO91986.1 - 8.8e-11 42.3 0.5 3e-10 40.6 0.5 1.9 1 0 0 1 1 1 1 D5 N terminal like PPL4 PF18188.1 RKO91986.1 - 9.7e-05 22.3 2.4 0.00014 21.8 0.3 2.5 3 0 0 3 3 3 1 Prim-pol 4 CxC7 PF18866.1 RKO91986.1 - 0.014 15.6 0.3 0.078 13.1 0.0 2.2 2 0 0 2 2 2 0 CxC7 like cysteine cluster associated with KDZ transposases Herpes_UL52 PF03121.15 RKO91986.1 - 0.039 13.9 6.9 0.24 11.4 3.2 2.7 2 0 0 2 2 2 0 Herpesviridae UL52/UL70 DNA primase TSC22 PF01166.18 RKO91987.1 - 0.0014 18.9 0.1 0.0046 17.2 0.1 1.9 1 0 0 1 1 1 1 TSC-22/dip/bun family DUF1515 PF07439.11 RKO91987.1 - 0.56 10.3 2.9 1.2 9.2 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1515) WASH_WAHD PF11945.8 RKO91987.1 - 0.84 9.1 4.6 6.4 6.2 0.4 2.1 2 0 0 2 2 2 0 WAHD domain of WASH complex SlyX PF04102.12 RKO91987.1 - 1.3 9.7 3.7 1.5 9.5 0.5 2.6 2 1 1 3 3 3 0 SlyX DUF724 PF05266.14 RKO91987.1 - 1.7 8.4 4.5 2.5 7.9 0.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF724) Skp1_POZ PF03931.15 RKO91988.1 - 8.4e-12 45.1 0.1 1.4e-11 44.4 0.1 1.4 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain Skp1 PF01466.19 RKO91988.1 - 3.2e-06 27.1 0.1 4.9e-05 23.4 0.0 2.2 2 0 0 2 2 2 1 Skp1 family, dimerisation domain BTB PF00651.31 RKO91988.1 - 0.0022 18.2 0.0 0.11 12.7 0.0 2.1 2 0 0 2 2 2 1 BTB/POZ domain Retrotran_gag_2 PF14223.6 RKO91996.1 - 1.9e-09 37.3 0.0 3.1e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type LRR_4 PF12799.7 RKO91996.1 - 0.27 11.7 0.4 3.6 8.1 0.6 2.8 3 1 0 3 3 3 0 Leucine Rich repeats (2 copies) CAP_N PF01213.19 RKO92000.1 - 0.11 12.0 3.2 0.18 11.2 0.2 2.3 2 0 0 2 2 2 0 Adenylate cyclase associated (CAP) N terminal Vinculin PF01044.19 RKO92004.1 - 7.1e-65 219.9 23.8 4.5e-38 131.2 12.3 3.4 2 1 0 3 3 3 3 Vinculin family Rac1 PF09632.10 RKO92004.1 - 0.0073 15.5 0.4 0.025 13.8 0.0 2.0 2 0 0 2 2 2 1 Rac1-binding domain zf-C2H2 PF00096.26 RKO92005.1 - 1.5e-11 44.1 8.5 2.4e-05 24.5 4.7 2.1 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO92005.1 - 8.4e-08 32.4 8.9 5.2e-05 23.8 2.9 2.2 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO92005.1 - 5.5e-07 29.7 6.8 0.00092 19.5 0.2 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-met PF12874.7 RKO92005.1 - 1.2e-06 28.7 1.1 4.9e-06 26.8 0.6 2.0 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 RKO92005.1 - 0.00023 21.4 0.8 0.0003 21.0 0.2 1.5 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 RKO92005.1 - 0.00042 20.2 4.7 0.0037 17.2 2.8 2.4 2 1 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_2 PF12756.7 RKO92005.1 - 0.0029 17.9 2.3 0.011 16.1 0.9 1.9 1 1 1 2 2 2 1 C2H2 type zinc-finger (2 copies) Zn_ribbon_SprT PF17283.2 RKO92005.1 - 0.0067 16.3 4.2 0.0067 16.3 4.2 1.6 2 0 0 2 2 2 1 SprT-like zinc ribbon domain zf-C2H2_9 PF16293.5 RKO92005.1 - 0.025 14.4 0.7 2.2 8.2 0.1 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (1 copy) zf-C2H2_11 PF16622.5 RKO92005.1 - 0.075 12.8 6.9 0.16 11.8 0.2 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-H2C2_5 PF13909.6 RKO92005.1 - 0.13 12.0 10.1 1.3 8.9 0.4 2.6 2 1 0 2 2 2 0 C2H2-type zinc-finger domain RRM_1 PF00076.22 RKO92007.1 - 0.02 14.7 0.1 0.33 10.8 0.0 2.6 2 1 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NUDE_C PF04880.13 RKO92007.1 - 0.16 12.5 7.7 0.17 12.4 3.3 2.6 2 1 1 3 3 3 0 NUDE protein, C-terminal conserved region TRAUB PF08164.12 RKO92008.1 - 7.2e-34 116.2 0.7 7.2e-34 116.2 0.7 3.1 4 0 0 4 4 4 1 Apoptosis-antagonizing transcription factor, C-terminal AATF-Che1 PF13339.6 RKO92008.1 - 9.1e-32 110.6 0.0 9.1e-32 110.6 0.0 3.4 3 2 0 3 3 3 1 Apoptosis antagonizing transcription factor HrcA_DNA-bdg PF03444.15 RKO92008.1 - 0.17 11.6 0.0 0.45 10.2 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Nop14 PF04147.12 RKO92008.1 - 0.28 9.4 20.7 0.0076 14.5 11.5 2.1 2 0 0 2 2 2 0 Nop14-like family MMR_HSR1 PF01926.23 RKO92009.1 - 4.7e-16 58.9 0.0 1.3e-15 57.5 0.0 1.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 RKO92009.1 - 2.2e-07 30.6 0.1 2.7e-06 27.0 0.1 2.1 2 0 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 RKO92009.1 - 4.9e-07 29.8 0.0 1.3e-06 28.5 0.0 1.6 1 1 0 1 1 1 1 RsgA GTPase AIG1 PF04548.16 RKO92009.1 - 1.1e-06 28.2 0.0 2e-06 27.3 0.0 1.4 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.23 RKO92009.1 - 0.012 15.6 1.3 4.3 7.4 0.1 2.3 1 1 1 2 2 2 0 Dynamin family IIGP PF05049.13 RKO92009.1 - 0.015 14.4 0.0 0.022 13.8 0.0 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) AAA_18 PF13238.6 RKO92009.1 - 0.09 13.3 0.2 0.21 12.1 0.2 1.6 1 0 0 1 1 1 0 AAA domain KTI12 PF08433.10 RKO92009.1 - 0.16 11.4 0.1 0.29 10.6 0.1 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Roc PF08477.13 RKO92009.1 - 0.2 11.9 0.0 0.45 10.7 0.0 1.6 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase GTP_EFTU PF00009.27 RKO92009.1 - 0.2 11.2 0.1 1.4 8.4 0.1 2.2 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain CBS PF00571.28 RKO92010.1 - 6.2e-16 58.6 0.2 2.9e-05 24.4 0.0 3.3 3 0 0 3 3 3 3 CBS domain BIR PF00653.21 RKO92011.1 - 0.0019 18.8 0.1 1 10.0 0.1 2.4 2 0 0 2 2 2 2 Inhibitor of Apoptosis domain Homeodomain PF00046.29 RKO92012.1 - 0.014 15.2 0.1 0.03 14.2 0.1 1.6 1 0 0 1 1 1 0 Homeodomain GDP_Man_Dehyd PF16363.5 RKO92013.1 - 9.4e-123 409.8 0.0 1.2e-122 409.5 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 RKO92013.1 - 2.3e-59 200.8 0.0 3.1e-59 200.4 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 RKO92013.1 - 9.9e-08 31.4 0.0 1.9e-07 30.5 0.0 1.4 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 RKO92013.1 - 8.3e-06 25.1 0.0 2.7e-05 23.4 0.0 1.7 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 RKO92013.1 - 0.0018 17.5 0.0 0.017 14.3 0.0 2.1 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 RKO92013.1 - 0.017 15.0 0.0 0.041 13.8 0.0 1.7 2 0 0 2 2 2 0 NAD(P)H-binding NmrA PF05368.13 RKO92013.1 - 0.046 13.3 0.1 0.11 12.1 0.0 1.6 2 0 0 2 2 2 0 NmrA-like family NAD_binding_2 PF03446.15 RKO92013.1 - 0.19 11.9 0.2 11 6.2 0.0 2.8 3 0 0 3 3 3 0 NAD binding domain of 6-phosphogluconate dehydrogenase ATP_bind_1 PF03029.17 RKO92014.1 - 3.1e-65 220.3 0.3 3.5e-65 220.1 0.3 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein GTP_EFTU PF00009.27 RKO92014.1 - 5.5e-05 22.8 0.0 0.00058 19.5 0.0 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain AAA_18 PF13238.6 RKO92014.1 - 0.00014 22.4 0.4 0.0094 16.5 0.0 2.8 2 1 1 3 3 3 1 AAA domain AAA_24 PF13479.6 RKO92014.1 - 0.00059 19.6 0.0 0.00087 19.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 RKO92014.1 - 0.0011 18.2 0.1 0.0025 17.1 0.0 1.6 2 0 0 2 2 2 1 Anion-transporting ATPase PduV-EutP PF10662.9 RKO92014.1 - 0.0013 18.5 0.1 0.27 11.0 0.0 2.4 2 1 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation AAA_22 PF13401.6 RKO92014.1 - 0.0015 18.8 0.0 0.006 16.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain SRP54 PF00448.22 RKO92014.1 - 0.0018 18.0 0.0 0.0032 17.1 0.0 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain CLP1_P PF16575.5 RKO92014.1 - 0.0021 17.9 0.0 0.028 14.2 0.0 2.2 2 1 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_30 PF13604.6 RKO92014.1 - 0.0025 17.6 0.0 0.0034 17.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 RKO92014.1 - 0.0043 17.4 0.1 0.0066 16.8 0.1 1.5 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 RKO92014.1 - 0.0049 16.9 0.0 0.031 14.3 0.0 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_7 PF12775.7 RKO92014.1 - 0.006 16.1 0.0 0.011 15.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region NACHT PF05729.12 RKO92014.1 - 0.011 15.6 0.2 0.24 11.3 0.0 2.3 3 0 0 3 3 2 0 NACHT domain Mg_chelatase PF01078.21 RKO92014.1 - 0.013 14.9 0.0 0.02 14.3 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 RKO92014.1 - 0.017 15.1 0.0 0.043 13.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain Thymidylate_kin PF02223.17 RKO92014.1 - 0.02 14.6 0.0 0.59 9.8 0.0 2.2 2 0 0 2 2 2 0 Thymidylate kinase AAA_16 PF13191.6 RKO92014.1 - 0.021 15.2 0.1 0.058 13.8 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain RNA_helicase PF00910.22 RKO92014.1 - 0.03 14.7 0.0 0.076 13.4 0.0 1.7 2 0 0 2 2 1 0 RNA helicase CbiA PF01656.23 RKO92014.1 - 0.036 14.1 0.0 0.044 13.8 0.0 1.3 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain PhoH PF02562.16 RKO92014.1 - 0.036 13.5 0.0 0.066 12.7 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein AAA PF00004.29 RKO92014.1 - 0.042 14.3 0.3 0.12 12.8 0.3 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 RKO92014.1 - 0.05 12.8 0.1 0.17 11.1 0.1 1.8 2 0 0 2 2 2 0 NB-ARC domain AAA_5 PF07728.14 RKO92014.1 - 0.052 13.5 0.0 0.091 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) DUF2969 PF11184.8 RKO92014.1 - 0.065 13.6 0.1 0.36 11.3 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2969) AAA_31 PF13614.6 RKO92014.1 - 0.068 13.1 0.0 0.26 11.2 0.0 2.0 1 1 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 RKO92014.1 - 0.071 12.8 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_33 PF13671.6 RKO92014.1 - 0.079 13.1 0.0 0.14 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 RKO92014.1 - 0.12 12.5 0.1 3.5 7.6 0.0 2.2 2 0 0 2 2 2 0 Helicase HerA, central domain T2SSE PF00437.20 RKO92014.1 - 0.12 11.4 0.0 0.2 10.7 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein NTPase_1 PF03266.15 RKO92014.1 - 0.13 12.1 0.1 0.28 11.1 0.1 1.5 1 0 0 1 1 1 0 NTPase B12D PF06522.11 RKO92017.1 - 5.6e-08 32.5 0.1 6.3e-08 32.3 0.1 1.1 1 0 0 1 1 1 1 NADH-ubiquinone reductase complex 1 MLRQ subunit HORMA PF02301.18 RKO92018.1 - 1.1e-62 211.5 0.0 1.2e-62 211.2 0.0 1.0 1 0 0 1 1 1 1 HORMA domain Med26 PF08711.11 RKO92019.1 - 7.5e-07 29.1 0.5 1.9e-06 27.8 0.5 1.7 1 0 0 1 1 1 1 TFIIS helical bundle-like domain SPO22 PF08631.10 RKO92019.1 - 0.087 12.3 0.1 0.14 11.7 0.1 1.2 1 0 0 1 1 1 0 Meiosis protein SPO22/ZIP4 like PWWP PF00855.17 RKO92020.1 - 3.9e-17 62.4 0.4 3.9e-17 62.4 0.4 2.9 2 0 0 2 2 2 1 PWWP domain Med26 PF08711.11 RKO92020.1 - 1e-07 31.9 0.4 2.6e-07 30.5 0.4 1.7 1 0 0 1 1 1 1 TFIIS helical bundle-like domain Arrestin_N PF00339.29 RKO92021.1 - 6.9e-09 35.9 0.0 1.1e-08 35.3 0.0 1.2 1 0 0 1 1 1 1 Arrestin (or S-antigen), N-terminal domain Ribonuc_red_lgC PF02867.15 RKO92022.1 - 1.1e-148 496.1 0.0 1.5e-148 495.6 0.0 1.2 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 RKO92022.1 - 7.7e-25 86.7 0.1 2e-24 85.4 0.1 1.7 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 RKO92022.1 - 1.8e-07 31.6 0.1 5.4e-07 30.1 0.1 1.9 1 0 0 1 1 1 1 ATP cone domain Ly-6_related PF06579.12 RKO92022.1 - 0.093 13.0 0.2 0.2 11.9 0.2 1.5 1 0 0 1 1 1 0 Caenorhabditis elegans ly-6-related protein CDC50 PF03381.15 RKO92023.1 - 1.1e-54 185.8 0.0 1.4e-54 185.5 0.0 1.0 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family CoaE PF01121.20 RKO92024.1 - 7.1e-57 192.0 0.0 8.1e-57 191.8 0.0 1.0 1 0 0 1 1 1 1 Dephospho-CoA kinase AAA_18 PF13238.6 RKO92024.1 - 7.7e-05 23.3 0.1 0.00078 20.0 0.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 RKO92024.1 - 0.00049 20.3 0.0 0.0023 18.1 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 RKO92024.1 - 0.0047 17.2 0.2 0.0063 16.8 0.2 1.8 1 1 0 1 1 1 1 AAA domain Prp18 PF02840.15 RKO92025.1 - 1.2e-62 210.2 0.1 1.8e-62 209.6 0.1 1.3 1 0 0 1 1 1 1 Prp18 domain PRP4 PF08799.11 RKO92025.1 - 1.4e-10 40.6 6.5 3e-10 39.5 6.5 1.6 1 0 0 1 1 1 1 pre-mRNA processing factor 4 (PRP4) like PK PF00224.21 RKO92026.1 - 1.3e-140 468.2 4.8 1.7e-140 467.9 4.8 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 RKO92026.1 - 1e-30 106.3 1.0 2.7e-30 105.0 1.0 1.8 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 RKO92026.1 - 0.0044 16.2 0.4 0.0091 15.2 0.4 1.6 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family IMPDH PF00478.25 RKO92026.1 - 0.0061 15.6 0.3 0.019 13.9 0.0 1.9 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain EMP70 PF02990.16 RKO92027.1 - 5.4e-214 711.7 8.4 5.4e-214 711.7 8.4 1.3 2 0 0 2 2 2 1 Endomembrane protein 70 OsmC PF02566.19 RKO92028.1 - 8.4e-15 55.1 0.0 1.2e-14 54.6 0.0 1.2 1 0 0 1 1 1 1 OsmC-like protein Cyclin PF08613.11 RKO92030.1 - 0.0003 21.2 0.0 0.00079 19.8 0.0 1.7 2 0 0 2 2 2 1 Cyclin SH3_9 PF14604.6 RKO92031.1 - 6.3e-18 64.4 0.1 6e-09 35.6 0.0 2.2 2 0 0 2 2 2 2 Variant SH3 domain SH3_2 PF07653.17 RKO92031.1 - 2e-06 27.4 0.0 2e-05 24.2 0.0 2.2 2 0 0 2 2 2 1 Variant SH3 domain SH3_1 PF00018.28 RKO92031.1 - 6.7e-06 25.6 0.0 0.0039 16.8 0.0 2.3 2 0 0 2 2 2 2 SH3 domain CCAP PF11105.8 RKO92031.1 - 0.027 14.4 0.0 0.052 13.5 0.0 1.4 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a PCB_OB PF17092.5 RKO92031.1 - 0.16 12.8 0.0 2.3 9.0 0.0 2.3 2 0 0 2 2 2 0 Penicillin-binding protein OB-like domain Chs7 PF12271.8 RKO92031.1 - 0.19 11.1 0.6 0.42 9.9 0.0 1.7 2 0 0 2 2 2 0 Chitin synthase export chaperone Unstab_antitox PF09720.10 RKO92031.1 - 0.19 11.8 1.7 0.46 10.6 1.1 2.0 2 0 0 2 2 2 0 Putative addiction module component LRR_4 PF12799.7 RKO92034.1 - 1e-22 79.8 35.7 1.3e-06 28.6 0.7 5.0 1 1 6 7 7 7 6 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO92034.1 - 4.4e-22 77.6 14.6 4.8e-11 42.2 3.7 4.2 2 1 2 4 4 4 4 Leucine rich repeat LRR_1 PF00560.33 RKO92034.1 - 7.9e-11 41.0 3.5 0.96 10.3 0.0 6.8 6 0 0 6 6 6 3 Leucine Rich Repeat LRR_9 PF14580.6 RKO92034.1 - 5.1e-09 35.9 2.9 0.00047 19.7 0.3 2.7 1 1 1 2 2 2 2 Leucine-rich repeat LRR_6 PF13516.6 RKO92034.1 - 0.00036 20.3 20.6 0.23 11.6 0.1 5.9 7 0 0 7 7 7 4 Leucine Rich repeat LRR_5 PF13306.6 RKO92034.1 - 0.084 12.8 0.2 0.54 10.2 0.1 2.1 1 1 0 1 1 1 0 BspA type Leucine rich repeat region (6 copies) CUE PF02845.16 RKO92035.1 - 0.00028 20.5 0.7 0.00049 19.7 0.3 1.6 2 0 0 2 2 2 1 CUE domain Peptidase_C48 PF02902.19 RKO92036.1 - 0.00024 21.0 0.0 0.0015 18.5 0.0 2.0 1 1 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain Abhydrolase_1 PF00561.20 RKO92037.1 - 1.5e-26 93.6 0.1 2.7e-25 89.5 0.1 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 RKO92037.1 - 3.6e-18 67.0 0.2 5.2e-18 66.5 0.2 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 RKO92037.1 - 2.4e-14 53.2 0.0 5.8e-14 51.9 0.0 1.5 2 0 0 2 2 2 1 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 RKO92037.1 - 0.0095 15.4 0.3 0.087 12.3 0.0 2.3 2 0 0 2 2 2 1 Prolyl oligopeptidase family DLH PF01738.18 RKO92037.1 - 0.013 15.1 0.0 0.085 12.4 0.0 1.9 2 0 0 2 2 2 0 Dienelactone hydrolase family Abhydrolase_1 PF00561.20 RKO92038.1 - 3.9e-12 46.3 0.0 6.2e-12 45.7 0.0 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 RKO92038.1 - 7.1e-06 26.8 0.5 1.2e-05 26.0 0.5 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 RKO92038.1 - 6.7e-05 22.3 0.0 0.00014 21.2 0.0 1.5 1 1 0 1 1 1 1 Serine aminopeptidase, S33 MSP1_C PF07462.11 RKO92039.1 - 7.2 5.2 6.4 8.4 5.0 6.4 1.3 1 0 0 1 1 1 0 Merozoite surface protein 1 (MSP1) C-terminus IQ PF00612.27 RKO92040.1 - 1.9 8.5 13.3 2 8.4 0.7 3.7 3 0 0 3 3 3 0 IQ calmodulin-binding motif PP2C PF00481.21 RKO92043.1 - 5.4e-22 78.7 0.0 6.6e-22 78.4 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.12 RKO92043.1 - 0.011 15.7 0.0 0.017 15.1 0.0 1.4 1 0 0 1 1 1 0 Stage II sporulation protein E (SpoIIE) Cbl_N2 PF02761.14 RKO92045.1 - 1.9e-05 25.3 0.2 14 6.5 0.0 4.2 4 0 0 4 4 4 3 CBL proto-oncogene N-terminus, EF hand-like domain Como_SCP PF02248.16 RKO92045.1 - 0.16 11.5 0.0 0.29 10.7 0.0 1.4 1 0 0 1 1 1 0 Small coat protein OPT PF03169.15 RKO92046.1 - 4.3e-36 124.8 21.8 3.2e-30 105.3 21.3 2.6 2 1 0 2 2 2 2 OPT oligopeptide transporter protein Metallophos PF00149.28 RKO92048.1 - 1.3e-08 35.6 0.0 1.8e-08 35.1 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos PF00149.28 RKO92049.1 - 1.1e-37 130.6 0.1 1.4e-37 130.2 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 RKO92049.1 - 5.3e-21 74.8 2.1 6.8e-21 74.5 0.9 1.8 2 0 0 2 2 2 1 Serine-threonine protein phosphatase N-terminal domain Metallophos PF00149.28 RKO92050.1 - 6.6e-39 134.5 0.1 8.5e-39 134.2 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 RKO92050.1 - 1.1e-21 76.9 0.3 3e-21 75.6 0.1 1.8 2 0 0 2 2 2 1 Serine-threonine protein phosphatase N-terminal domain BPL_LplA_LipB PF03099.19 RKO92051.1 - 2e-07 31.0 0.1 4.7e-07 29.8 0.1 1.6 1 1 0 1 1 1 1 Biotin/lipoate A/B protein ligase family 2OG-FeII_Oxy_4 PF13661.6 RKO92052.1 - 0.03 15.0 0.0 0.18 12.5 0.0 2.1 2 0 0 2 2 2 0 2OG-Fe(II) oxygenase superfamily ArsA_ATPase PF02374.15 RKO92052.1 - 0.067 12.4 0.1 0.11 11.7 0.1 1.3 1 0 0 1 1 1 0 Anion-transporting ATPase MA3 PF02847.17 RKO92054.1 - 3.4e-09 36.7 0.1 6e-09 35.9 0.1 1.4 1 0 0 1 1 1 1 MA3 domain CCDC144C PF14915.6 RKO92054.1 - 0.4 9.8 7.4 0.033 13.3 0.5 2.5 3 1 2 5 5 5 0 CCDC144C protein coiled-coil region TEX13 PF15186.6 RKO92054.1 - 6 6.5 7.9 4.1 7.1 4.9 2.2 1 1 1 2 2 2 0 Testis-expressed sequence 13 protein family PEHE PF15275.6 RKO92056.1 - 1.6e-06 28.8 1.0 1.6e-06 28.8 1.0 2.5 3 0 0 3 3 3 1 PEHE domain SAS4 PF15460.6 RKO92056.1 - 0.017 15.2 1.5 0.032 14.3 1.5 1.3 1 0 0 1 1 1 0 Something about silencing, SAS, complex subunit 4 DUF2431 PF10354.9 RKO92057.1 - 4.8e-35 121.3 0.0 7.5e-35 120.7 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) zf-NOSIP PF15906.5 RKO92058.1 - 1e-13 51.2 1.5 2e-13 50.3 1.5 1.5 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein zf-RING_2 PF13639.6 RKO92058.1 - 4.2e-05 23.8 5.4 4.2e-05 23.8 5.4 2.9 3 0 0 3 3 3 2 Ring finger domain zf-C3HC4_3 PF13920.6 RKO92058.1 - 8.4e-05 22.4 27.3 9.4e-05 22.2 7.8 2.9 3 1 0 3 3 3 2 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO92058.1 - 0.00084 19.2 21.4 0.018 14.9 7.9 3.1 2 1 0 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 RKO92058.1 - 0.00097 19.1 14.9 0.0085 16.1 3.0 3.1 2 1 0 2 2 2 2 RING-type zinc-finger zf-RING_5 PF14634.6 RKO92058.1 - 0.0037 17.2 10.3 0.0037 17.2 10.3 2.9 3 1 0 3 3 3 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 RKO92058.1 - 0.02 14.7 6.9 0.02 14.7 6.9 3.5 3 1 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) DYW_deaminase PF14432.6 RKO92058.1 - 0.3 10.9 4.4 0.26 11.1 1.2 2.2 2 0 0 2 2 2 0 DYW family of nucleic acid deaminases Prok-RING_4 PF14447.6 RKO92058.1 - 1.5 8.8 26.2 0.087 12.7 3.5 3.7 4 0 0 4 4 4 0 Prokaryotic RING finger family 4 AAA PF00004.29 RKO92059.1 - 2.3e-17 63.7 0.0 3e-17 63.3 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 RKO92059.1 - 1e-08 34.8 0.0 1.9e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 AAA+ lid domain AAA_35 PF14516.6 RKO92059.1 - 0.24 10.2 0.0 0.26 10.1 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain Zn_clus PF00172.18 RKO92060.1 - 9.9e-05 22.4 11.2 0.00019 21.5 11.2 1.5 1 0 0 1 1 1 1 Fungal Zn(2)-Cys(6) binuclear cluster domain PAS PF00989.25 RKO92060.1 - 0.04 13.9 0.0 0.077 13.0 0.0 1.5 1 0 0 1 1 1 0 PAS fold SERTA PF06031.13 RKO92061.1 - 0.032 13.9 0.1 0.069 12.8 0.1 1.5 1 0 0 1 1 1 0 SERTA motif ABC_membrane PF00664.23 RKO92062.1 - 1.2e-23 84.1 4.6 3.1e-22 79.5 4.6 2.5 1 1 0 1 1 1 1 ABC transporter transmembrane region AAA_23 PF13476.6 RKO92062.1 - 0.29 11.6 0.0 0.29 11.6 0.0 1.5 2 0 0 2 2 2 0 AAA domain RNF220 PF15926.5 RKO92065.1 - 4.9e-19 69.0 12.4 3.6e-16 59.5 7.4 2.4 2 1 1 3 3 3 2 E3 ubiquitin-protein ligase RNF220 Proteasome PF00227.26 RKO92066.1 - 7.4e-52 175.6 0.0 1.1e-51 175.1 0.0 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 RKO92066.1 - 1.9e-15 56.2 0.1 3.7e-15 55.3 0.1 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature NAPRTase_N PF17767.1 RKO92070.1 - 3.2e-30 105.1 0.0 5e-30 104.5 0.0 1.3 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NAPRTase PF04095.16 RKO92070.1 - 4.5e-23 82.1 0.3 1.7e-21 77.0 0.2 2.7 1 1 1 2 2 2 1 Nicotinate phosphoribosyltransferase (NAPRTase) family LRR_6 PF13516.6 RKO92071.1 - 1.1e-21 75.0 1.3 0.00095 19.0 0.0 8.8 9 0 0 9 9 9 6 Leucine Rich repeat LRR_1 PF00560.33 RKO92071.1 - 8.5e-06 25.6 0.0 75 4.5 0.0 7.0 8 0 0 8 8 8 0 Leucine Rich Repeat LRR_4 PF12799.7 RKO92071.1 - 1.6e-05 25.2 11.6 2.1 8.9 2.8 6.0 4 2 3 7 7 7 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO92071.1 - 0.0022 17.7 8.5 6.1 6.7 0.0 5.6 5 2 0 5 5 5 2 Leucine rich repeat Esterase PF00756.20 RKO92072.1 - 2.7e-50 171.4 0.0 3.1e-50 171.2 0.0 1.0 1 0 0 1 1 1 1 Putative esterase Peptidase_S9 PF00326.21 RKO92072.1 - 6.7e-05 22.5 0.0 8.6e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Chlorophyllase2 PF12740.7 RKO92072.1 - 0.0079 15.1 0.0 0.012 14.5 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase enzyme Hydrolase_4 PF12146.8 RKO92072.1 - 0.018 14.3 0.0 0.023 13.9 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Esterase_phd PF10503.9 RKO92072.1 - 0.067 12.7 0.0 0.36 10.3 0.0 1.9 1 1 0 1 1 1 0 Esterase PHB depolymerase TTL PF03133.15 RKO92073.1 - 1.5e-62 211.4 0.0 1.2e-60 205.1 0.0 2.1 2 0 0 2 2 2 2 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 RKO92073.1 - 1.3e-06 27.9 0.0 0.00026 20.3 0.0 2.5 2 1 0 2 2 2 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 RKO92073.1 - 0.0039 16.5 0.0 0.18 11.0 0.0 2.1 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp OAD_gamma PF04277.13 RKO92074.1 - 0.27 11.9 1.4 1 10.0 1.4 2.0 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain MpPF26 PF07666.11 RKO92074.1 - 1.2 9.3 9.7 0.034 14.3 1.7 2.3 2 0 0 2 2 2 0 M penetrans paralogue family 26 IRK_N PF08466.10 RKO92076.1 - 0.035 14.3 0.1 2.9 8.1 0.0 2.5 2 0 0 2 2 2 0 Inward rectifier potassium channel N-terminal PRCC PF10253.9 RKO92076.1 - 4 8.2 9.8 1.3 9.7 6.4 1.8 2 0 0 2 2 2 0 Mitotic checkpoint regulator, MAD2B-interacting E1-E2_ATPase PF00122.20 RKO92078.1 - 2.1e-21 76.2 1.6 8.9e-21 74.2 0.0 2.5 2 0 0 2 2 2 1 E1-E2 ATPase PLAC8 PF04749.17 RKO92079.1 - 2e-11 44.7 0.0 2.1e-11 44.7 0.0 1.1 1 0 0 1 1 1 1 PLAC8 family PLAC8 PF04749.17 RKO92080.1 - 2.2e-17 63.9 8.3 2.9e-17 63.5 8.3 1.2 1 0 0 1 1 1 1 PLAC8 family NmrA PF05368.13 RKO92083.1 - 8.2e-18 64.8 0.0 1e-17 64.5 0.0 1.1 1 0 0 1 1 1 1 NmrA-like family NAD_binding_10 PF13460.6 RKO92083.1 - 1.1e-05 25.4 0.0 1.8e-05 24.7 0.0 1.5 1 1 0 1 1 1 1 NAD(P)H-binding Rac1 PF09632.10 RKO92084.1 - 0.11 11.6 0.1 0.16 11.1 0.1 1.2 1 0 0 1 1 1 0 Rac1-binding domain DTW PF03942.15 RKO92085.1 - 1.4e-22 80.3 0.0 1.8e-22 80.0 0.0 1.1 1 0 0 1 1 1 1 DTW domain Pex26 PF07163.12 RKO92086.1 - 0.00031 20.2 0.0 0.00072 19.0 0.0 1.6 1 1 0 1 1 1 1 Pex26 protein TPR_14 PF13428.6 RKO92086.1 - 0.043 14.7 3.9 0.34 11.8 0.7 3.1 2 1 0 2 2 2 0 Tetratricopeptide repeat Lactamase_B_2 PF12706.7 RKO92087.1 - 8.3e-17 61.4 0.1 1.3e-16 60.7 0.1 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 RKO92087.1 - 0.00021 21.3 0.2 0.00084 19.4 0.1 1.9 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily SSB PF00436.25 RKO92088.1 - 8.7e-11 41.8 0.0 1.6e-10 41.0 0.0 1.3 1 0 0 1 1 1 1 Single-strand binding protein family GNT-I PF03071.15 RKO92089.1 - 3e-21 75.7 0.3 4.1e-21 75.2 0.3 1.2 1 0 0 1 1 1 1 GNT-I family Glyco_transf_18 PF15024.6 RKO92089.1 - 0.00015 20.5 1.9 0.0002 20.1 1.9 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 18 Mito_fiss_reg PF05308.11 RKO92092.1 - 8.5 6.4 8.1 13 5.7 8.1 1.2 1 0 0 1 1 1 0 Mitochondrial fission regulator CAP_N PF01213.19 RKO92092.1 - 8.9 5.7 10.1 13 5.1 10.1 1.3 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal LUC7 PF03194.15 RKO92093.1 - 2.6e-70 236.9 1.9 3.4e-70 236.6 1.9 1.0 1 0 0 1 1 1 1 LUC7 N_terminus DUF4200 PF13863.6 RKO92093.1 - 0.0014 19.0 6.9 0.003 18.0 0.4 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF4200) ZapB PF06005.12 RKO92093.1 - 0.03 14.8 0.9 0.067 13.6 0.9 1.6 1 0 0 1 1 1 0 Cell division protein ZapB Com_YlbF PF06133.11 RKO92093.1 - 0.053 14.1 1.9 7.5 7.2 0.0 2.3 2 0 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA RSS_P20 PF11757.8 RKO92093.1 - 0.2 12.1 0.3 0.4 11.2 0.3 1.6 1 0 0 1 1 1 0 Suppressor of RNA silencing P21-like N-terminal domain TAF4 PF05236.14 RKO92096.1 - 8e-33 114.4 0.0 1.5e-32 113.4 0.0 1.5 1 0 0 1 1 1 1 Transcription initiation factor TFIID component TAF4 family SAGA-Tad1 PF12767.7 RKO92096.1 - 2 8.1 8.8 30 4.3 8.6 2.2 1 1 0 1 1 1 0 Transcriptional regulator of RNA polII, SAGA, subunit PAT1 PF09770.9 RKO92096.1 - 2.5 6.2 11.9 3.6 5.8 11.9 1.1 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 Ribosomal_S9 PF00380.19 RKO92105.1 - 3.2e-35 121.3 0.0 3.5e-35 121.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 RabGAP-TBC PF00566.18 RKO92107.1 - 5.9e-54 183.0 0.1 2.8e-53 180.8 0.1 1.9 1 1 0 1 1 1 1 Rab-GTPase-TBC domain RRM_1 PF00076.22 RKO92108.1 - 6.4e-11 41.9 0.1 1.9e-10 40.4 0.1 1.8 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WD40 PF00400.32 RKO92109.1 - 0.029 15.2 0.4 10 7.2 0.0 4.5 5 0 0 5 5 5 0 WD domain, G-beta repeat ARID PF01388.21 RKO92110.1 - 4.5e-15 56.1 0.0 9.2e-15 55.1 0.0 1.6 1 0 0 1 1 1 1 ARID/BRIGHT DNA binding domain Late_protein_L2 PF00513.18 RKO92110.1 - 1 8.3 5.0 1.6 7.7 5.0 1.2 1 0 0 1 1 1 0 Late Protein L2 Histone PF00125.24 RKO92111.1 - 6.5e-52 175.4 2.7 7.2e-52 175.2 2.7 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 RKO92111.1 - 3.3e-05 24.0 0.4 5.6e-05 23.2 0.1 1.6 2 0 0 2 2 2 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 RKO92111.1 - 3.9e-05 23.9 0.0 6e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 CENP-S protein PAF PF15715.5 RKO92111.1 - 0.00017 22.2 1.3 0.00021 21.9 1.3 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CBFD_NFYB_HMF PF00808.23 RKO92111.1 - 0.0096 16.2 0.1 0.019 15.3 0.1 1.5 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 RKO92111.1 - 0.12 12.4 0.2 0.22 11.6 0.1 1.5 2 0 0 2 2 2 0 Transcription initiation factor IID, 31kD subunit CENP-T_C PF15511.6 RKO92112.1 - 1e-08 35.3 0.1 1.2e-08 35.0 0.1 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold TAF PF02969.17 RKO92112.1 - 5e-05 23.4 0.1 7.4e-05 22.9 0.1 1.4 1 1 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-S PF15630.6 RKO92112.1 - 6.2e-05 23.3 0.1 7.9e-05 23.0 0.1 1.3 1 1 0 1 1 1 1 CENP-S protein Histone PF00125.24 RKO92112.1 - 0.00013 22.3 0.2 0.00015 22.2 0.2 1.3 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 RKO92112.1 - 0.00015 22.0 0.1 0.0003 21.0 0.1 1.7 1 1 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 RKO92112.1 - 0.0093 16.0 0.0 0.011 15.8 0.0 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit Bromo_TP PF07524.13 RKO92112.1 - 0.012 15.6 0.0 0.019 14.9 0.0 1.3 1 0 0 1 1 1 0 Bromodomain associated UPF0137 PF03677.13 RKO92112.1 - 0.028 14.2 0.2 0.033 14.0 0.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0137) TFIID_20kDa PF03847.13 RKO92112.1 - 0.077 13.5 0.0 0.16 12.5 0.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A MPP6 PF10175.9 RKO92113.1 - 3.9e-20 72.7 6.4 3.9e-20 72.7 6.4 4.3 5 0 0 5 5 5 1 M-phase phosphoprotein 6 CEP63 PF17045.5 RKO92113.1 - 8.5e-05 22.6 9.4 8.5e-05 22.6 9.4 8.3 3 2 5 9 9 9 2 Centrosomal protein of 63 kDa HAP1_N PF04849.13 RKO92113.1 - 0.0017 17.6 0.1 0.0017 17.6 0.1 8.0 4 2 2 7 7 7 3 HAP1 N-terminal conserved region DUF3087 PF11286.8 RKO92113.1 - 0.13 11.7 0.5 0.57 9.6 0.5 2.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3087) TRM13 PF05206.14 RKO92114.1 - 1.3e-62 211.7 0.0 1.8e-62 211.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase TRM13 Methyltransf_31 PF13847.6 RKO92114.1 - 0.0026 17.5 0.0 0.0043 16.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 RKO92114.1 - 0.015 15.2 2.6 0.64 10.0 1.7 2.5 1 1 0 1 1 1 0 Methyltransferase domain efThoc1 PF11957.8 RKO92116.1 - 3.8e-63 213.9 5.6 5.4e-63 213.4 5.6 1.1 1 0 0 1 1 1 1 THO complex subunit 1 transcription elongation factor OPT PF03169.15 RKO92119.1 - 5.2e-131 438.3 49.9 6e-131 438.1 49.9 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein WD40 PF00400.32 RKO92121.1 - 8.4e-14 51.8 12.7 0.0031 18.3 1.0 5.6 6 0 0 6 6 6 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO92121.1 - 0.037 14.3 1.2 1.7 9.0 0.1 2.8 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain Pkinase PF00069.25 RKO92122.1 - 1.9e-11 43.8 0.0 8.1e-11 41.8 0.0 1.9 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO92122.1 - 0.00022 20.6 0.0 0.00035 19.9 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Myotub-related PF06602.14 RKO92123.1 - 2.6e-141 470.7 0.0 3e-141 470.5 0.0 1.0 1 0 0 1 1 1 1 Myotubularin-like phosphatase domain DSPc PF00782.20 RKO92123.1 - 0.029 14.2 0.0 0.053 13.3 0.0 1.3 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 RKO92123.1 - 0.13 11.8 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.6 RKO92123.1 - 0.14 12.1 0.0 0.33 10.9 0.0 1.6 1 0 0 1 1 1 0 Tyrosine phosphatase family Glyco_hydro_16 PF00722.21 RKO92125.1 - 1.7e-20 73.2 1.0 2e-20 73.0 1.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 16 F-box-like PF12937.7 RKO92127.1 - 3.5e-07 30.0 0.1 9.8e-07 28.6 0.1 1.9 1 0 0 1 1 1 1 F-box-like ketoacyl-synt PF00109.26 RKO92130.1 - 1.5e-45 155.8 0.4 1.7e-45 155.6 0.4 1.1 1 0 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain Thiolase_N PF00108.23 RKO92130.1 - 1.1e-05 25.0 0.3 1.9e-05 24.2 0.3 1.4 1 0 0 1 1 1 1 Thiolase, N-terminal domain NTP_transf_2 PF01909.23 RKO92131.1 - 3.9e-10 39.9 0.0 6.4e-10 39.2 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyltransferase domain PAP_assoc PF03828.19 RKO92131.1 - 6.5e-06 26.3 2.4 1.1e-05 25.5 2.4 1.4 1 0 0 1 1 1 1 Cid1 family poly A polymerase Polbeta PF18765.1 RKO92131.1 - 0.019 15.0 0.0 0.033 14.3 0.0 1.4 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase tRNA_anti-codon PF01336.25 RKO92132.1 - 2.8e-10 40.0 0.2 4.5e-10 39.4 0.2 1.3 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain RPA_C PF08784.11 RKO92132.1 - 3.8e-08 33.9 0.0 1e-07 32.5 0.0 1.8 1 0 0 1 1 1 1 Replication protein A C terminal RMI2 PF16100.5 RKO92132.1 - 0.026 14.3 0.0 0.049 13.5 0.0 1.4 1 0 0 1 1 1 0 RecQ-mediated genome instability protein 2 DNA_repr_REX1B PF14966.6 RKO92132.1 - 0.11 13.2 0.1 0.21 12.2 0.1 1.4 1 0 0 1 1 1 0 DNA repair REX1-B eIF-5_eIF-2B PF01873.17 RKO92134.1 - 1.8e-40 137.5 0.2 2.9e-40 136.8 0.2 1.3 1 0 0 1 1 1 1 Domain found in IF2B/IF5 W2 PF02020.18 RKO92134.1 - 4e-24 84.5 2.0 4e-24 84.5 2.0 3.0 3 0 0 3 3 3 1 eIF4-gamma/eIF5/eIF2-epsilon DUF3797 PF12677.7 RKO92134.1 - 0.0073 16.2 0.5 0.02 14.7 0.5 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF3797) TERB2 PF15101.6 RKO92134.1 - 0.15 12.1 1.2 0.26 11.3 0.0 1.8 2 0 0 2 2 2 0 Telomere-associated protein TERB2 Zn-ribbon_8 PF09723.10 RKO92134.1 - 0.17 12.0 0.6 0.45 10.7 0.6 1.8 1 0 0 1 1 1 0 Zinc ribbon domain DUF2387 PF09526.10 RKO92134.1 - 0.72 10.1 3.7 0.46 10.7 1.2 2.0 2 0 0 2 2 2 0 Probable metal-binding protein (DUF2387) BUD22 PF09073.10 RKO92134.1 - 1.3 8.3 14.7 0.071 12.4 7.0 1.9 2 0 0 2 2 2 0 BUD22 Acyl_transf_3 PF01757.22 RKO92135.1 - 5.9e-16 58.4 34.9 1e-15 57.7 34.9 1.4 1 0 0 1 1 1 1 Acyltransferase family TFIIF_beta PF02270.15 RKO92136.1 - 1.5e-26 92.3 0.2 2.3e-26 91.7 0.2 1.3 1 0 0 1 1 1 1 TFIIF, beta subunit HTH domain TFIIF_beta_N PF17683.1 RKO92136.1 - 8.2e-18 65.4 0.0 1.4e-17 64.6 0.0 1.5 1 1 0 1 1 1 1 TFIIF, beta subunit N-terminus Tau95 PF09734.9 RKO92136.1 - 0.0046 17.8 0.2 0.0089 16.8 0.2 1.5 1 1 0 1 1 1 1 RNA polymerase III transcription factor (TF)IIIC subunit HTH domain Serglycin PF04360.12 RKO92136.1 - 0.049 13.6 0.0 0.074 13.0 0.0 1.2 1 0 0 1 1 1 0 Serglycin Ribosomal_60s PF00428.19 RKO92136.1 - 0.067 13.8 0.9 0.067 13.8 0.9 2.5 3 1 0 3 3 3 0 60s Acidic ribosomal protein PROL5-SMR PF15621.6 RKO92141.1 - 3 8.4 6.0 0.75 10.4 1.1 2.3 3 0 0 3 3 3 0 Proline-rich submaxillary gland androgen-regulated family ssDNA_DBD PF18333.1 RKO92142.1 - 0.29 11.2 6.1 2.9 8.0 0.5 2.8 2 0 0 2 2 2 0 Non-canonical single-stranded DNA-binding domain Pox_A_type_inc PF04508.12 RKO92142.1 - 0.37 10.7 11.5 0.051 13.4 2.1 4.1 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat DUF4250 PF14056.6 RKO92142.1 - 0.94 9.5 4.4 2.6 8.1 0.1 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4250) TSC22 PF01166.18 RKO92142.1 - 1.4 9.3 8.3 0.29 11.5 0.4 3.2 3 0 0 3 3 3 0 TSC-22/dip/bun family FliD_N PF02465.18 RKO92142.1 - 8.6 7.1 15.5 4.5 8.0 3.5 3.6 3 1 0 3 3 3 0 Flagellar hook-associated protein 2 N-terminus BTB PF00651.31 RKO92143.1 - 3.5e-12 46.5 0.0 7.9e-12 45.4 0.0 1.6 1 0 0 1 1 1 1 BTB/POZ domain Skp1_POZ PF03931.15 RKO92143.1 - 0.0063 16.7 0.0 0.014 15.5 0.0 1.6 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain SWIM PF04434.17 RKO92144.1 - 0.0055 16.3 0.9 0.17 11.6 0.3 2.6 2 0 0 2 2 2 2 SWIM zinc finger USP8_dimer PF08969.11 RKO92145.1 - 1.8e-09 37.8 0.1 3.1e-09 37.0 0.1 1.3 1 0 0 1 1 1 1 USP8 dimerisation domain Rhodanese PF00581.20 RKO92145.1 - 0.056 14.0 0.0 0.69 10.5 0.0 2.3 1 1 0 1 1 1 0 Rhodanese-like domain COX4 PF02936.14 RKO92147.1 - 1.8e-22 79.8 0.6 2.3e-22 79.5 0.6 1.1 1 0 0 1 1 1 1 Cytochrome c oxidase subunit IV DAHP_synth_2 PF01474.16 RKO92148.1 - 3.2e-169 563.1 0.0 3.5e-169 562.9 0.0 1.0 1 0 0 1 1 1 1 Class-II DAHP synthetase family Nitroreductase PF00881.24 RKO92148.1 - 0.075 13.1 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Nitroreductase family Pkinase PF00069.25 RKO92149.1 - 4.4e-23 82.0 0.0 6.8e-23 81.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain WD40 PF00400.32 RKO92149.1 - 2.6e-19 69.2 2.3 2.4e-06 28.2 0.0 6.0 5 0 0 5 5 5 3 WD domain, G-beta repeat HEAT PF02985.22 RKO92149.1 - 1.2e-10 40.6 0.6 0.011 16.0 0.0 5.5 6 0 0 6 6 6 2 HEAT repeat Pkinase_Tyr PF07714.17 RKO92149.1 - 1.5e-07 31.0 0.0 2.5e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase HEAT_EZ PF13513.6 RKO92149.1 - 3.5e-05 24.2 0.4 0.013 16.0 0.1 4.0 3 0 0 3 3 3 1 HEAT-like repeat HEAT_2 PF13646.6 RKO92149.1 - 0.00028 21.2 0.0 0.16 12.4 0.0 4.0 2 2 3 5 5 5 2 HEAT repeats Cnd1 PF12717.7 RKO92149.1 - 0.0043 17.1 0.4 2.8 8.0 0.0 3.2 2 1 1 3 3 3 1 non-SMC mitotic condensation complex subunit 1 Tti2 PF10521.9 RKO92149.1 - 0.024 14.2 0.0 0.047 13.2 0.0 1.4 1 0 0 1 1 1 0 Tti2 family Quaking_NLS PF16551.5 RKO92149.1 - 0.072 12.8 0.0 0.17 11.6 0.0 1.6 1 0 0 1 1 1 0 Putative nuclear localisation signal of quaking HLH PF00010.26 RKO92150.1 - 3.4e-09 36.5 0.1 7.5e-09 35.4 0.1 1.6 1 0 0 1 1 1 1 Helix-loop-helix DNA-binding domain Peptidase_M61 PF05299.12 RKO92150.1 - 0.065 13.6 0.3 0.12 12.8 0.3 1.3 1 0 0 1 1 1 0 M61 glycyl aminopeptidase Guanylate_cyc PF00211.20 RKO92152.1 - 3.4e-20 72.4 0.3 7.9e-20 71.2 0.3 1.6 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain GAF PF01590.26 RKO92152.1 - 1.3e-11 45.2 0.1 8.5e-05 23.2 0.0 2.8 3 0 0 3 3 3 2 GAF domain GAF_2 PF13185.6 RKO92152.1 - 5.7e-05 23.4 0.1 0.0027 18.0 0.1 2.7 2 0 0 2 2 2 1 GAF domain GAF_3 PF13492.6 RKO92152.1 - 0.0017 18.7 0.0 0.03 14.7 0.0 2.6 2 1 0 2 2 2 1 GAF domain TPR_2 PF07719.17 RKO92152.1 - 0.089 13.0 0.2 0.25 11.5 0.2 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO92152.1 - 0.12 13.0 0.1 0.28 11.9 0.1 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat Asp PF00026.23 RKO92154.1 - 1.1e-08 34.8 0.1 2.6e-05 23.8 0.0 2.1 2 0 0 2 2 2 2 Eukaryotic aspartyl protease Methyltr_RsmB-F PF01189.17 RKO92155.1 - 9.3e-28 97.2 0.0 2.1e-27 96.1 0.0 1.6 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Fibrillarin PF01269.17 RKO92155.1 - 0.0022 17.2 0.0 0.0039 16.3 0.0 1.3 1 0 0 1 1 1 1 Fibrillarin DNA_pack_N PF02500.15 RKO92155.1 - 0.095 12.5 0.4 7.1 6.4 0.0 2.3 2 0 0 2 2 2 0 Probable DNA packing protein, N-terminus DUF572 PF04502.13 RKO92156.1 - 8.3 5.9 9.6 0.96 9.0 4.7 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF572) Herpes_ori_bp PF02399.15 RKO92161.1 - 9.5e-06 24.0 0.2 0.06 11.4 0.0 2.1 2 0 0 2 2 2 2 Origin of replication binding protein HP0268 PF18618.1 RKO92161.1 - 0.13 12.7 0.3 0.39 11.2 0.3 1.7 1 0 0 1 1 1 0 HP0268 MCM PF00493.23 RKO92165.1 - 3e-101 337.2 0.1 4.4e-101 336.7 0.1 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 RKO92165.1 - 8.4e-39 132.3 0.1 1.6e-38 131.4 0.1 1.4 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 RKO92165.1 - 2.2e-26 92.1 0.2 6.9e-26 90.5 0.2 1.9 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_N PF14551.6 RKO92165.1 - 1.7e-14 54.3 0.1 6.8e-14 52.3 0.1 2.1 1 0 0 1 1 1 1 MCM N-terminal domain Mg_chelatase PF01078.21 RKO92165.1 - 1.9e-08 34.0 0.0 5.7e-07 29.1 0.0 2.6 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 RKO92165.1 - 9.7e-07 28.9 0.0 2.6e-06 27.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM2_N PF12619.8 RKO92165.1 - 3.7e-06 27.3 9.0 3.7e-06 27.3 9.0 2.3 3 0 0 3 3 3 1 Mini-chromosome maintenance protein 2 AAA_3 PF07726.11 RKO92165.1 - 2.7e-05 24.0 0.1 0.00017 21.4 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 RKO92165.1 - 0.0015 18.2 0.2 0.0049 16.6 0.2 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_30 PF13604.6 RKO92165.1 - 0.019 14.7 0.3 0.047 13.4 0.3 1.6 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 RKO92165.1 - 0.022 15.2 0.0 0.051 14.0 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PaaX PF07848.12 RKO92167.1 - 0.16 12.2 0.5 0.47 10.7 0.5 1.8 1 0 0 1 1 1 0 PaaX-like protein ANAPC4_WD40 PF12894.7 RKO92168.1 - 1.1e-08 35.2 0.0 0.053 13.8 0.0 5.3 5 2 1 6 6 6 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 RKO92168.1 - 0.00044 21.0 0.5 9 7.4 0.6 4.8 5 0 0 5 5 5 1 WD domain, G-beta repeat eIF2A PF08662.11 RKO92168.1 - 0.016 15.1 0.1 0.19 11.6 0.0 2.3 2 0 0 2 2 2 0 Eukaryotic translation initiation factor eIF2A TFIIIC_delta PF12657.7 RKO92168.1 - 0.033 14.1 0.2 1.3 8.9 0.0 2.6 3 0 0 3 3 3 0 Transcription factor IIIC subunit delta N-term Lum_binding PF00677.17 RKO92169.1 - 1.3e-34 118.0 0.3 3.3e-19 68.6 0.0 2.2 2 0 0 2 2 2 2 Lumazine binding domain Spore_coat_CotO PF14153.6 RKO92170.1 - 1.1 9.2 8.3 1.2 9.0 8.3 1.2 1 0 0 1 1 1 0 Spore coat protein CotO cNMP_binding PF00027.29 RKO92173.1 - 2.3e-30 104.5 6.3 7e-15 54.9 0.4 5.6 4 2 0 4 4 4 3 Cyclic nucleotide-binding domain Patatin PF01734.22 RKO92173.1 - 6.6e-13 49.3 6.8 2.4e-11 44.2 3.0 2.7 1 1 0 2 2 2 2 Patatin-like phospholipase Phage-MuB_C PF09077.11 RKO92175.1 - 0.11 12.4 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Mu B transposition protein, C terminal GTP_EFTU PF00009.27 RKO92179.1 - 9.5e-53 178.6 0.0 1.5e-52 178.0 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 RKO92179.1 - 9.6e-43 145.0 0.0 1.8e-42 144.2 0.0 1.5 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 RKO92179.1 - 1.2e-14 54.4 0.9 3e-14 53.2 0.2 2.1 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 RKO92179.1 - 0.0012 18.9 0.1 0.035 14.2 0.1 2.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase Semialdhyde_dhC PF02774.18 RKO92179.1 - 0.011 15.8 0.1 0.068 13.2 0.0 2.1 1 1 1 2 2 2 0 Semialdehyde dehydrogenase, dimerisation domain NIF3 PF01784.18 RKO92179.1 - 0.023 14.3 0.0 0.045 13.4 0.0 1.4 1 0 0 1 1 1 0 NIF3 (NGG1p interacting factor 3) GTP_EFTU_D4 PF14578.6 RKO92179.1 - 0.092 12.7 1.0 0.19 11.6 0.2 1.9 2 0 0 2 2 2 0 Elongation factor Tu domain 4 PPR PF01535.20 RKO92181.1 - 6.6e-08 32.3 0.3 0.14 12.5 0.0 6.2 7 0 0 7 7 7 2 PPR repeat PPR_2 PF13041.6 RKO92181.1 - 2.3e-07 30.9 0.0 0.0084 16.3 0.0 4.8 4 1 1 5 5 5 3 PPR repeat family TPR_14 PF13428.6 RKO92181.1 - 0.0012 19.5 10.6 0.57 11.2 0.1 6.7 7 0 0 7 7 5 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO92181.1 - 0.0075 16.8 1.3 0.35 11.6 0.0 4.0 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO92181.1 - 0.014 16.1 3.9 0.3 11.8 0.2 4.4 5 1 0 5 5 5 0 Tetratricopeptide repeat ATP-synt_DE PF00401.20 RKO92181.1 - 0.03 14.6 3.4 0.16 12.3 0.5 3.3 2 0 0 2 2 2 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TPR_2 PF07719.17 RKO92181.1 - 0.067 13.3 0.1 4 7.8 0.0 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF2977 PF11192.8 RKO92181.1 - 0.093 12.9 0.0 18 5.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2977) PPR_3 PF13812.6 RKO92181.1 - 0.11 12.6 0.1 1.1 9.3 0.0 2.7 3 0 0 3 3 3 0 Pentatricopeptide repeat domain DUF1949 PF09186.11 RKO92181.1 - 0.18 11.7 0.1 32 4.5 0.0 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1949) TPR_4 PF07721.14 RKO92181.1 - 0.18 12.5 14.5 20 6.2 0.1 6.6 7 0 0 7 7 6 0 Tetratricopeptide repeat PPR_2 PF13041.6 RKO92182.1 - 0.0051 17.0 0.0 0.17 12.1 0.0 2.8 2 1 1 3 3 3 2 PPR repeat family PPR PF01535.20 RKO92182.1 - 0.011 15.9 0.2 7.2 7.1 0.0 3.7 4 0 0 4 4 4 0 PPR repeat PPR PF01535.20 RKO92184.1 - 2.8e-06 27.2 0.8 5.5 7.5 0.0 5.2 6 0 0 6 6 6 3 PPR repeat PPR_2 PF13041.6 RKO92184.1 - 2.8e-06 27.4 0.0 0.00082 19.5 0.0 3.6 4 0 0 4 4 4 1 PPR repeat family CcdA PF07362.12 RKO92184.1 - 0.035 14.5 0.1 0.093 13.2 0.1 1.7 1 0 0 1 1 1 0 Post-segregation antitoxin CcdA TPR_4 PF07721.14 RKO92184.1 - 5.8 7.8 9.3 10 7.1 0.2 4.5 4 0 0 4 4 4 0 Tetratricopeptide repeat zf_CCCH_4 PF18345.1 RKO92185.1 - 4.1e-09 36.2 11.7 3.7e-06 26.8 2.4 3.0 2 1 0 2 2 2 2 Zinc finger domain zf-CCCH PF00642.24 RKO92185.1 - 7.7e-09 35.2 8.5 1.5e-06 28.0 1.0 2.3 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 RKO92185.1 - 5e-06 26.2 11.3 0.00023 20.9 1.0 2.7 2 1 0 2 2 2 2 CCCH-type zinc finger CUE PF02845.16 RKO92185.1 - 0.0001 21.9 0.3 0.00025 20.7 0.3 1.6 1 0 0 1 1 1 1 CUE domain Torus PF16131.5 RKO92185.1 - 0.00072 20.2 6.2 0.011 16.4 0.9 2.4 1 1 1 2 2 2 2 Torus domain zf-C3H1 PF10650.9 RKO92185.1 - 0.047 13.4 0.1 0.092 12.5 0.1 1.5 1 0 0 1 1 1 0 Putative zinc-finger domain zf-CCCH_2 PF14608.6 RKO92185.1 - 0.073 13.6 11.5 0.15 12.5 1.4 2.4 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger zf-CCCH_3 PF15663.5 RKO92185.1 - 0.2 11.9 7.4 1.1 9.5 0.3 2.2 1 1 1 2 2 2 0 Zinc-finger containing family Med19 PF10278.9 RKO92186.1 - 0.16 11.9 0.0 0.23 11.4 0.0 1.2 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 GCV_H PF01597.19 RKO92187.1 - 1.4e-46 157.4 0.5 1.5e-46 157.3 0.5 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein RnfC_N PF13375.6 RKO92187.1 - 0.037 14.0 0.1 0.053 13.5 0.1 1.3 1 0 0 1 1 1 0 RnfC Barrel sandwich hybrid domain Biotin_lipoyl PF00364.22 RKO92187.1 - 0.042 13.7 0.8 0.1 12.5 0.2 2.0 3 0 0 3 3 3 0 Biotin-requiring enzyme RNaseH_C PF09293.10 RKO92187.1 - 0.066 13.6 0.1 0.83 10.0 0.1 2.1 1 1 0 1 1 1 0 T4 RNase H, C terminal Ribonuc_red_sm PF00268.21 RKO92188.1 - 1.5e-47 162.4 0.0 5.7e-47 160.5 0.0 1.7 1 1 0 1 1 1 1 Ribonucleotide reductase, small chain DnaJ PF00226.31 RKO92189.1 - 2e-22 79.0 1.1 3.2e-22 78.4 1.1 1.3 1 0 0 1 1 1 1 DnaJ domain RPT PF13446.6 RKO92189.1 - 0.046 13.7 0.2 3.2 7.8 0.1 2.5 3 0 0 3 3 3 0 A repeated domain in UCH-protein Capsid_N PF16903.5 RKO92191.1 - 2.9e-44 151.2 0.0 3.9e-44 150.8 0.0 1.2 1 0 0 1 1 1 1 Major capsid protein N-terminus Capsid_NCLDV PF04451.12 RKO92191.1 - 1e-12 48.3 0.0 1.6e-12 47.7 0.0 1.3 1 0 0 1 1 1 1 Large eukaryotic DNA virus major capsid protein HNH_3 PF13392.6 RKO92192.1 - 0.00031 20.4 3.5 0.0046 16.7 0.1 2.5 2 0 0 2 2 2 2 HNH endonuclease NIF PF03031.18 RKO92193.1 - 1.5e-09 37.9 0.0 1.8e-09 37.5 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Mito_carr PF00153.27 RKO92195.1 - 4.6e-61 202.8 0.3 1.9e-23 82.2 0.0 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein Serine_protease PF18405.1 RKO92195.1 - 0.00074 18.8 0.0 0.0059 15.8 0.0 2.3 2 1 0 2 2 2 1 Gammaproteobacterial serine protease IFT20 PF14931.6 RKO92196.1 - 2.4 8.3 10.5 15 5.7 6.5 3.0 2 0 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 Pro_isomerase PF00160.21 RKO92197.1 - 5e-48 163.3 0.0 5.6e-48 163.2 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PPR_2 PF13041.6 RKO92198.1 - 2.4e-56 187.7 1.2 2.3e-10 40.5 0.9 11.8 5 3 8 13 13 13 10 PPR repeat family PPR PF01535.20 RKO92198.1 - 5.6e-42 139.1 6.4 4e-07 29.8 0.0 13.5 14 0 0 14 14 14 6 PPR repeat PPR_3 PF13812.6 RKO92198.1 - 4.3e-41 138.8 0.0 3.4e-09 36.6 0.0 9.2 5 4 3 10 10 10 7 Pentatricopeptide repeat domain PPR_long PF17177.4 RKO92198.1 - 6.3e-25 87.8 0.0 9.3e-06 25.2 0.0 5.6 1 1 2 5 5 5 5 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 RKO92198.1 - 9.8e-24 82.8 3.1 0.00021 20.9 0.0 11.2 11 0 0 11 11 11 4 PPR repeat TPR_14 PF13428.6 RKO92198.1 - 1.1e-05 25.9 18.0 3.7 8.6 0.1 10.1 6 3 5 11 11 11 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO92198.1 - 9.5e-05 22.8 1.3 0.48 11.0 0.0 5.0 3 2 3 6 6 6 2 Tetratricopeptide repeat TPR_7 PF13176.6 RKO92198.1 - 0.00045 20.0 0.3 2 8.6 0.0 4.9 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 RKO92198.1 - 0.00077 19.4 2.8 1.3 9.4 0.2 5.3 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_1 PF00515.28 RKO92198.1 - 0.011 15.5 8.0 0.14 12.0 0.2 4.5 5 0 0 5 5 5 0 Tetratricopeptide repeat Chitin_synth_2 PF03142.15 RKO92199.1 - 4.1e-246 817.7 0.0 5.2e-246 817.3 0.0 1.0 1 0 0 1 1 1 1 Chitin synthase Glyco_tranf_2_3 PF13641.6 RKO92199.1 - 3.5e-15 56.5 0.0 3.5e-14 53.3 0.0 2.4 1 1 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 RKO92199.1 - 9.3e-15 55.1 2.3 2e-14 54.0 2.3 1.6 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 RKO92199.1 - 6.4e-06 25.7 0.1 0.00042 19.8 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferase family 21 Glycos_transf_2 PF00535.26 RKO92199.1 - 0.00033 20.5 0.0 0.034 14.0 0.0 2.4 2 0 0 2 2 2 1 Glycosyl transferase family 2 Sfi1 PF08457.10 RKO92201.1 - 0.00078 18.1 48.5 0.0017 17.0 31.6 3.1 3 0 0 3 3 3 3 Sfi1 spindle body protein NAT PF04768.13 RKO92202.1 - 2.4e-42 144.5 0.0 4.1e-42 143.7 0.0 1.3 1 0 0 1 1 1 1 NAT, N-acetyltransferase, of N-acetylglutamate synthase Acetyltransf_1 PF00583.25 RKO92202.1 - 0.038 14.2 0.0 0.12 12.6 0.0 1.8 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family Helicase_C PF00271.31 RKO92203.1 - 1.6e-05 25.2 0.0 9.1e-05 22.8 0.0 2.1 1 1 0 1 1 1 1 Helicase conserved C-terminal domain Lsm_C PF14894.6 RKO92203.1 - 0.064 13.0 0.7 0.14 12.0 0.5 1.6 1 1 0 1 1 1 0 Lsm C-terminal Spb1_C PF07780.12 RKO92204.1 - 4.2e-66 222.6 18.9 4.8e-66 222.4 18.9 1.0 1 0 0 1 1 1 1 Spb1 C-terminal domain Peptidase_S9_N PF02897.15 RKO92207.1 - 0.0027 16.6 0.0 0.0032 16.3 0.0 1.0 1 0 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain WD40 PF00400.32 RKO92208.1 - 4.3e-05 24.2 0.0 0.46 11.4 0.0 2.8 2 1 0 2 2 2 2 WD domain, G-beta repeat ORC6 PF05460.13 RKO92208.1 - 0.22 10.7 7.1 0.3 10.3 7.1 1.2 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Phasin_2 PF09361.10 RKO92209.1 - 0.0021 18.3 32.2 0.0025 18.1 0.0 3.8 1 1 3 4 4 4 2 Phasin protein PuR_N PF09182.10 RKO92209.1 - 0.056 13.4 0.2 0.18 11.8 0.2 1.9 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal ApoLp-III PF07464.11 RKO92209.1 - 0.98 9.5 21.5 1.2 9.2 2.0 3.2 2 1 1 3 3 3 0 Apolipophorin-III precursor (apoLp-III) DUF883 PF05957.13 RKO92209.1 - 3.8 8.2 33.4 2.3 8.9 8.5 4.3 2 1 2 4 4 4 0 Bacterial protein of unknown function (DUF883) WD40 PF00400.32 RKO92210.1 - 0.0045 17.8 0.0 1.2 10.1 0.2 2.8 2 1 0 2 2 2 2 WD domain, G-beta repeat ORC6 PF05460.13 RKO92210.1 - 0.12 11.6 6.8 0.15 11.3 6.8 1.2 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Zn-ribbon_8 PF09723.10 RKO92213.1 - 0.16 12.1 0.3 0.5 10.5 0.1 1.9 2 0 0 2 2 2 0 Zinc ribbon domain Ank_2 PF12796.7 RKO92214.1 - 7.4e-15 55.3 0.1 1.5e-14 54.4 0.1 1.5 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO92214.1 - 1e-14 54.7 1.3 3.7e-08 33.7 0.1 3.0 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank PF00023.30 RKO92214.1 - 5.5e-14 51.9 0.4 2.7e-07 30.7 0.2 3.5 3 0 0 3 3 3 2 Ankyrin repeat Ank_5 PF13857.6 RKO92214.1 - 5.5e-13 48.9 1.4 4.5e-12 46.0 0.3 2.6 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO92214.1 - 1.2e-09 37.6 0.7 6.8e-06 26.0 0.1 3.6 3 1 0 3 3 3 2 Ankyrin repeat Y_phosphatase PF00102.27 RKO92215.1 - 5e-26 91.7 0.0 6.7e-26 91.3 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase PF00102.27 RKO92216.1 - 1.2e-70 237.8 0.0 1.3e-70 237.6 0.0 1.0 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.6 RKO92216.1 - 0.0014 18.6 0.0 0.0017 18.4 0.0 1.2 1 0 0 1 1 1 1 Tyrosine phosphatase family DSPc PF00782.20 RKO92216.1 - 0.018 14.9 0.1 0.026 14.3 0.1 1.4 1 0 0 1 1 1 0 Dual specificity phosphatase, catalytic domain PTPlike_phytase PF14566.6 RKO92216.1 - 0.087 12.9 0.0 0.2 11.8 0.0 1.6 1 0 0 1 1 1 0 Inositol hexakisphosphate Ricin_B_lectin PF00652.22 RKO92217.1 - 2.2e-14 53.8 1.1 3.3e-14 53.2 0.1 1.8 2 0 0 2 2 2 1 Ricin-type beta-trefoil lectin domain RicinB_lectin_2 PF14200.6 RKO92217.1 - 1.4e-06 28.9 10.0 0.0041 17.8 0.1 3.5 2 1 1 3 3 3 2 Ricin-type beta-trefoil lectin domain-like B_lectin PF01453.24 RKO92217.1 - 3e-05 24.5 4.7 1.6 9.3 0.0 3.8 2 1 1 3 3 3 3 D-mannose binding lectin PIRT PF15099.6 RKO92217.1 - 0.5 9.9 3.4 4.4 6.9 1.7 2.5 2 0 0 2 2 2 0 Phosphoinositide-interacting protein family RNA_pol_Rpb1_2 PF00623.20 RKO92218.1 - 1.3e-17 64.5 0.0 2.2e-17 63.8 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_5 PF04998.17 RKO92218.1 - 6.6e-12 45.4 0.1 1.6e-11 44.2 0.0 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_3 PF04983.18 RKO92218.1 - 1.9e-09 37.7 0.0 3.8e-09 36.7 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 RKO92218.1 - 7.6e-09 35.5 0.1 1.7e-08 34.3 0.1 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 zf-C2H2 PF00096.26 RKO92219.1 - 8.5e-12 44.8 23.0 0.0009 19.6 2.4 3.3 3 0 0 3 3 3 3 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 RKO92219.1 - 4.9e-08 33.1 15.9 1.2e-05 25.5 3.3 3.5 4 0 0 4 4 4 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 RKO92219.1 - 4.2e-05 24.0 24.7 0.033 15.0 1.9 3.7 3 1 0 3 3 3 3 C2H2-type zinc finger zf-C2H2_11 PF16622.5 RKO92219.1 - 0.011 15.4 1.7 0.011 15.4 1.7 3.1 3 1 0 3 3 3 0 zinc-finger C2H2-type zf-C2H2_6 PF13912.6 RKO92219.1 - 0.013 15.5 1.1 0.013 15.5 1.1 2.9 3 0 0 3 3 3 0 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 RKO92219.1 - 0.021 15.1 9.2 0.24 11.7 0.0 3.9 4 0 0 4 4 4 0 Zinc-finger double-stranded RNA-binding zf-H2C2_5 PF13909.6 RKO92219.1 - 1.1 9.1 20.4 5 7.0 0.1 4.1 4 0 0 4 4 4 0 C2H2-type zinc-finger domain Zn_Tnp_IS1595 PF12760.7 RKO92219.1 - 7.2 6.7 12.2 8.1 6.5 10.1 2.1 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Ion_trans_2 PF07885.16 RKO92221.1 - 1.3e-07 31.5 13.1 0.00039 20.3 1.5 2.4 2 0 0 2 2 2 2 Ion channel GATA PF00320.27 RKO92222.1 - 2.4e-13 49.4 4.7 4.7e-13 48.5 4.7 1.5 1 0 0 1 1 1 1 GATA zinc finger GEMIN8 PF15348.6 RKO92222.1 - 0.18 12.1 0.2 2.5 8.4 0.0 2.1 2 0 0 2 2 2 0 Gemini of Cajal bodies-associated protein 8 LRR_2 PF07723.13 RKO92224.1 - 1.5 9.6 4.2 63 4.5 0.1 4.2 5 0 0 5 5 5 0 Leucine Rich Repeat zf-H2C2_2 PF13465.6 RKO92225.1 - 1.2e-12 47.6 20.6 6.6e-06 26.3 2.4 4.9 5 0 0 5 5 5 2 Zinc-finger double domain zf-C2H2 PF00096.26 RKO92225.1 - 3e-12 46.3 26.1 1.3e-05 25.4 0.3 4.3 4 0 0 4 4 4 4 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO92225.1 - 1.1e-06 29.0 23.8 0.00036 21.1 0.2 4.5 4 0 0 4 4 4 2 C2H2-type zinc finger FOXP-CC PF16159.5 RKO92225.1 - 0.00042 20.9 0.1 0.00042 20.9 0.1 3.0 3 1 1 4 4 4 2 FOXP coiled-coil domain zf-C2H2_6 PF13912.6 RKO92225.1 - 0.00073 19.5 0.1 0.00073 19.5 0.1 3.8 4 1 0 4 4 4 1 C2H2-type zinc finger zf_ZIC PF18366.1 RKO92225.1 - 0.0015 18.6 0.7 0.0015 18.6 0.7 4.2 4 2 0 4 4 4 1 Zic proteins zinc finger domain zf-C2H2_jaz PF12171.8 RKO92225.1 - 0.0017 18.6 10.1 0.81 10.1 0.0 4.4 4 0 0 4 4 4 2 Zinc-finger double-stranded RNA-binding zf-C2H2_8 PF15909.5 RKO92225.1 - 0.0019 18.4 4.9 0.15 12.4 4.2 2.4 1 1 1 2 2 2 1 C2H2-type zinc ribbon zf-C2H2_aberr PF17017.5 RKO92225.1 - 0.0082 16.3 7.2 0.28 11.3 2.0 2.9 1 1 0 2 2 2 2 Aberrant zinc-finger zf-LYAR PF08790.11 RKO92225.1 - 0.39 10.6 4.3 30 4.7 0.0 3.7 3 0 0 3 3 3 0 LYAR-type C2HC zinc finger Pkinase PF00069.25 RKO92226.1 - 1.8e-12 47.2 0.0 2.5e-12 46.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Kinase-like PF14531.6 RKO92226.1 - 0.21 10.9 0.0 0.3 10.4 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Importin_rep_4 PF18808.1 RKO92227.1 - 0.00013 22.2 0.2 0.0003 21.0 0.1 1.9 2 1 0 2 2 2 1 Importin repeat Cyt-b5 PF00173.28 RKO92228.1 - 9.5e-09 35.3 0.0 2e-08 34.3 0.0 1.5 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain NAD_binding_1 PF00175.21 RKO92228.1 - 3.7e-08 34.0 0.0 7.1e-08 33.1 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 RKO92228.1 - 2.3e-06 27.9 0.0 4.5e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_1 PF00175.21 RKO92229.1 - 1.5e-13 51.3 0.0 2.8e-13 50.4 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain Cyt-b5 PF00173.28 RKO92229.1 - 3.1e-13 49.7 0.0 6.2e-13 48.7 0.0 1.5 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain FAD_binding_6 PF00970.24 RKO92229.1 - 3.3e-13 49.8 0.0 7.5e-13 48.7 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 RKO92229.1 - 1.7e-05 25.0 0.0 3.1e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Ferric reductase NAD binding domain E1_dh PF00676.20 RKO92231.1 - 4.3e-37 127.7 0.3 5e-37 127.5 0.3 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component Pex14_N PF04695.13 RKO92231.1 - 0.025 15.2 0.1 0.034 14.8 0.1 1.3 1 0 0 1 1 1 0 Peroxisomal membrane anchor protein (Pex14p) conserved region Velvet PF11754.8 RKO92233.1 - 1.1e-26 94.3 0.1 1.4e-26 94.0 0.1 1.1 1 0 0 1 1 1 1 Velvet factor DUF2076 PF09849.9 RKO92235.1 - 0.047 13.7 1.0 0.056 13.5 1.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2076) RNA_pol_Rpb2_6 PF00562.28 RKO92237.1 - 5.6e-12 45.4 0.0 6e-06 25.6 0.0 2.0 2 0 0 2 2 2 2 RNA polymerase Rpb2, domain 6 JmjC PF02373.22 RKO92238.1 - 3.7e-12 46.7 0.0 7e-12 45.8 0.0 1.4 1 0 0 1 1 1 1 JmjC domain, hydroxylase Cupin_2 PF07883.11 RKO92238.1 - 0.082 12.6 0.0 0.2 11.4 0.0 1.6 1 0 0 1 1 1 0 Cupin domain Cupin_8 PF13621.6 RKO92238.1 - 0.1 12.3 0.0 0.16 11.7 0.0 1.5 1 1 0 1 1 1 0 Cupin-like domain AAA PF00004.29 RKO92239.1 - 9.1e-45 152.3 0.1 2.8e-44 150.7 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 RKO92239.1 - 2.8e-09 37.1 0.1 8.3e-09 35.6 0.1 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Prot_ATP_ID_OB PF16450.5 RKO92239.1 - 4.2e-09 36.2 0.1 3.5e-08 33.3 0.0 2.4 2 0 0 2 2 2 1 Proteasomal ATPase OB C-terminal domain AAA_16 PF13191.6 RKO92239.1 - 6.4e-08 33.2 0.9 2.3e-05 24.8 0.0 3.0 2 2 0 3 3 3 1 AAA ATPase domain AAA_lid_3 PF17862.1 RKO92239.1 - 6.7e-08 32.2 0.0 1.8e-07 30.9 0.0 1.8 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 RKO92239.1 - 7.2e-08 32.7 0.0 2.1e-07 31.2 0.0 1.8 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) DUF815 PF05673.13 RKO92239.1 - 6.4e-06 25.5 0.0 1.2e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_22 PF13401.6 RKO92239.1 - 6.9e-05 23.1 1.4 0.015 15.6 1.4 2.7 1 1 0 1 1 1 1 AAA domain TsaE PF02367.17 RKO92239.1 - 0.0002 21.3 0.1 0.014 15.3 0.0 2.4 1 1 1 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE RuvB_N PF05496.12 RKO92239.1 - 0.00032 20.5 0.0 0.00091 19.0 0.0 1.8 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 RKO92239.1 - 0.00045 20.8 0.0 0.0017 18.9 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_28 PF13521.6 RKO92239.1 - 0.00054 20.2 0.3 0.0012 19.1 0.0 1.8 2 0 0 2 2 1 1 AAA domain RNA_helicase PF00910.22 RKO92239.1 - 0.0013 19.1 0.0 0.003 17.9 0.0 1.6 1 0 0 1 1 1 1 RNA helicase AAA_14 PF13173.6 RKO92239.1 - 0.0013 18.8 0.0 0.004 17.2 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 RKO92239.1 - 0.0023 17.7 0.1 0.0068 16.1 0.1 1.9 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 RKO92239.1 - 0.0025 17.8 0.0 0.009 15.9 0.0 2.0 2 0 0 2 2 2 1 NTPase AAA_33 PF13671.6 RKO92239.1 - 0.0036 17.5 0.0 0.017 15.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 RKO92239.1 - 0.0038 16.8 0.1 0.024 14.2 0.1 2.0 1 1 0 1 1 1 1 P-loop containing dynein motor region IstB_IS21 PF01695.17 RKO92239.1 - 0.0066 16.2 0.1 0.022 14.5 0.0 1.9 2 0 0 2 2 2 1 IstB-like ATP binding protein TniB PF05621.11 RKO92239.1 - 0.0079 15.6 0.0 0.68 9.3 0.0 2.4 2 0 0 2 2 2 1 Bacterial TniB protein AAA_3 PF07726.11 RKO92239.1 - 0.0085 16.0 0.0 0.026 14.4 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 RKO92239.1 - 0.0086 15.5 0.1 0.019 14.3 0.1 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI NACHT PF05729.12 RKO92239.1 - 0.011 15.6 0.1 0.079 12.9 0.0 2.2 2 0 0 2 2 2 0 NACHT domain AAA_24 PF13479.6 RKO92239.1 - 0.019 14.7 0.1 0.047 13.4 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 RKO92239.1 - 0.019 14.5 2.6 0.049 13.2 0.1 2.5 2 1 1 3 3 3 0 AAA domain ATPase PF06745.13 RKO92239.1 - 0.021 14.2 0.1 0.56 9.5 0.0 2.4 2 0 0 2 2 2 0 KaiC TIP49 PF06068.13 RKO92239.1 - 0.021 14.1 0.0 0.042 13.0 0.0 1.5 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_11 PF13086.6 RKO92239.1 - 0.032 14.0 0.1 0.1 12.4 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 RKO92239.1 - 0.046 14.1 0.1 0.13 12.6 0.1 1.7 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 RKO92239.1 - 0.065 12.9 1.1 1.3 8.7 0.0 3.0 4 1 0 4 4 3 0 Sigma-54 interaction domain Bac_DnaA PF00308.18 RKO92239.1 - 0.079 12.8 0.0 0.17 11.7 0.0 1.6 1 0 0 1 1 1 0 Bacterial dnaA protein ATPase_2 PF01637.18 RKO92239.1 - 0.094 12.6 0.7 0.86 9.5 0.0 2.5 2 1 1 3 3 3 0 ATPase domain predominantly from Archaea Parvo_NS1 PF01057.17 RKO92239.1 - 0.14 11.2 0.0 0.27 10.3 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 cobW PF02492.19 RKO92239.1 - 0.15 11.6 0.0 0.34 10.5 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ABC_tran PF00005.27 RKO92239.1 - 0.16 12.5 0.1 0.56 10.7 0.0 2.1 2 1 0 2 2 2 0 ABC transporter NRBF2 PF08961.10 RKO92239.1 - 0.25 10.9 2.3 0.46 10.1 2.3 1.3 1 0 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator CAGE1 PF15066.6 RKO92239.1 - 0.4 9.3 4.3 0.58 8.8 4.3 1.2 1 0 0 1 1 1 0 Cancer-associated gene protein 1 family AAA_23 PF13476.6 RKO92239.1 - 0.78 10.2 3.6 4.6 7.7 0.0 2.4 2 1 0 2 2 2 0 AAA domain Nuc_sug_transp PF04142.15 RKO92240.1 - 1e-96 323.8 19.6 1.2e-96 323.6 19.6 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 RKO92240.1 - 3e-08 33.9 28.1 7.5e-07 29.4 5.1 2.5 2 1 1 3 3 3 3 EamA-like transporter family PUNUT PF16913.5 RKO92240.1 - 0.00014 21.2 2.0 0.00014 21.2 2.0 3.2 1 1 2 3 3 3 1 Purine nucleobase transmembrane transport UAA PF08449.11 RKO92240.1 - 0.028 13.6 16.9 0.068 12.4 3.6 2.5 1 1 1 2 2 2 0 UAA transporter family Endosulfine PF04667.17 RKO92242.1 - 1.8e-25 88.9 1.4 3.6e-25 87.9 1.2 1.5 1 1 1 2 2 2 1 cAMP-regulated phosphoprotein/endosulfine conserved region PHD PF00628.29 RKO92244.1 - 2.5e-10 40.1 13.5 7.6e-06 25.7 9.9 2.7 2 0 0 2 2 2 2 PHD-finger zf-PHD-like PF15446.6 RKO92244.1 - 0.013 15.2 1.6 2.4 7.8 1.5 2.6 2 0 0 2 2 2 0 PHD/FYVE-zinc-finger like domain zf-HC5HC2H PF13771.6 RKO92244.1 - 0.34 11.2 6.8 0.044 14.0 2.3 1.8 2 0 0 2 2 2 0 PHD-like zinc-binding domain PHD_4 PF16866.5 RKO92244.1 - 0.73 10.0 10.9 16 5.7 0.1 2.9 2 0 0 2 2 2 0 PHD-finger PHD_2 PF13831.6 RKO92244.1 - 2 8.0 9.8 9.3 5.9 0.3 2.7 2 0 0 2 2 2 0 PHD-finger Osmo_MPGsynth PF09488.10 RKO92245.1 - 3.5 6.2 7.2 5.2 5.7 7.2 1.1 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) DUF3546 PF12066.8 RKO92251.1 - 1.4e-19 70.3 5.3 2.8e-19 69.3 5.3 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3546) ARS2 PF04959.13 RKO92251.1 - 3.1e-17 63.6 0.3 2.1e-16 60.9 0.0 2.2 2 0 0 2 2 2 1 Arsenite-resistance protein 2 zf-C2H2_jaz PF12171.8 RKO92251.1 - 0.0072 16.6 1.6 0.015 15.5 1.6 1.5 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 RKO92251.1 - 0.0095 16.3 1.3 0.026 14.9 1.3 1.8 1 0 0 1 1 1 1 Zinc-finger of C2H2 type DUF4187 PF13821.6 RKO92251.1 - 0.014 15.1 0.9 0.034 13.9 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4187) zf-C2H2_4 PF13894.6 RKO92251.1 - 0.068 14.0 1.3 0.068 14.0 1.3 2.9 3 0 0 3 3 3 0 C2H2-type zinc finger zf-C2H2_6 PF13912.6 RKO92251.1 - 0.26 11.3 1.0 0.8 9.8 1.0 1.8 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2_2 PF12756.7 RKO92251.1 - 1.7 9.0 5.0 0.27 11.6 0.2 2.1 3 0 0 3 3 3 0 C2H2 type zinc-finger (2 copies) zf-C2H2 PF00096.26 RKO92251.1 - 3.4 8.3 8.7 0.11 13.0 1.2 2.5 3 0 0 3 3 3 0 Zinc finger, C2H2 type MTS PF05175.14 RKO92252.1 - 6.7e-06 25.8 0.0 4e-05 23.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase small domain DUF938 PF06080.12 RKO92252.1 - 0.054 13.3 0.0 0.075 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) PQQ_2 PF13360.6 RKO92253.1 - 7.8e-12 45.3 3.2 3.9e-09 36.4 0.8 3.0 1 1 0 2 2 2 2 PQQ-like domain PQQ PF01011.21 RKO92253.1 - 0.0001 22.0 0.2 0.55 10.3 0.0 4.0 4 0 0 4 4 4 2 PQQ enzyme repeat GCD14 PF08704.10 RKO92253.1 - 0.12 12.0 0.1 0.39 10.3 0.0 1.7 2 0 0 2 2 2 0 tRNA methyltransferase complex GCD14 subunit Lambda_tail_I PF06805.12 RKO92253.1 - 0.14 12.6 0.1 0.42 11.0 0.0 1.9 2 0 0 2 2 2 0 Bacteriophage lambda tail assembly protein I PQQ_3 PF13570.6 RKO92253.1 - 6.4 7.4 8.0 1.5 9.5 0.1 4.0 4 1 1 5 5 5 0 PQQ-like domain BPS PF08947.10 RKO92255.1 - 2.5 8.0 4.9 0.46 10.3 0.4 2.1 3 0 0 3 3 3 0 BPS (Between PH and SH2) DUF4558 PF15104.6 RKO92256.1 - 1.3e-15 57.2 8.6 1.8e-15 56.8 8.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4558) CDH1_2_SANT_HL1 PF18375.1 RKO92256.1 - 0.0093 16.6 0.1 0.017 15.8 0.1 1.5 1 0 0 1 1 1 1 CDH1/2 SANT-Helical linker 1 MlaC PF05494.12 RKO92256.1 - 0.019 14.8 0.4 0.023 14.5 0.4 1.1 1 0 0 1 1 1 0 MlaC protein zf-CCHC PF00098.23 RKO92257.1 - 1.5e-12 46.9 25.2 0.0017 18.4 3.9 4.2 4 0 0 4 4 4 4 Zinc knuckle zf-CCHC_2 PF13696.6 RKO92257.1 - 3.7e-05 23.4 7.3 0.00017 21.4 0.7 4.2 4 0 0 4 4 4 2 Zinc knuckle zf-CCHC_4 PF14392.6 RKO92257.1 - 0.0038 16.9 22.3 0.073 12.8 1.5 4.1 4 0 0 4 4 4 3 Zinc knuckle zf-CCHC_5 PF14787.6 RKO92257.1 - 0.0084 15.8 3.2 0.0084 15.8 3.2 3.8 3 1 1 4 4 4 2 GAG-polyprotein viral zinc-finger zf-RING_9 PF13901.6 RKO92257.1 - 0.29 11.1 9.9 0.34 10.9 1.4 2.1 2 0 0 2 2 2 0 Putative zinc-RING and/or ribbon PHD_4 PF16866.5 RKO92257.1 - 4.3 7.5 11.4 0.57 10.3 2.3 2.7 1 1 2 3 3 3 0 PHD-finger PEPCK_ATP PF01293.20 RKO92261.1 - 3.1e-214 711.9 0.0 3.8e-214 711.6 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase PheRS_DBD2 PF18554.1 RKO92262.1 - 0.031 14.2 0.4 0.091 12.8 0.1 2.0 2 0 0 2 2 2 0 PheRS DNA binding domain 2 PQQ_2 PF13360.6 RKO92265.1 - 2.4e-06 27.3 0.3 7.5e-06 25.7 0.3 2.0 1 1 0 1 1 1 1 PQQ-like domain PQQ_3 PF13570.6 RKO92265.1 - 0.00014 22.3 0.6 1 9.9 0.1 4.3 4 1 0 4 4 4 2 PQQ-like domain PQQ PF01011.21 RKO92265.1 - 0.13 12.2 0.5 0.55 10.3 0.0 2.4 2 0 0 2 2 2 0 PQQ enzyme repeat WD40 PF00400.32 RKO92265.1 - 1.4 9.9 3.6 28 5.8 0.1 3.6 3 1 0 3 3 3 0 WD domain, G-beta repeat GREB1 PF15782.5 RKO92267.1 - 5.1 4.1 6.5 5.2 4.1 6.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer RR_TM4-6 PF06459.12 RKO92267.1 - 5.9 6.6 11.2 7.2 6.4 11.2 1.2 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 ERG4_ERG24 PF01222.17 RKO92268.1 - 8.4e-83 278.5 18.9 1e-82 278.3 18.9 1.0 1 0 0 1 1 1 1 Ergosterol biosynthesis ERG4/ERG24 family Cpn60_TCP1 PF00118.24 RKO92269.1 - 4.8e-151 503.7 21.5 5.4e-151 503.5 21.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Sua5_yciO_yrdC PF01300.18 RKO92269.1 - 0.025 14.1 0.0 0.065 12.7 0.0 1.7 1 0 0 1 1 1 0 Telomere recombination GlcNAc-1_reg PF18440.1 RKO92269.1 - 0.15 12.3 0.4 5.1 7.4 0.0 3.0 3 0 0 3 3 3 0 Putative GlcNAc-1 phosphotransferase regulatory domain Dehyd-heme_bind PF09098.10 RKO92269.1 - 0.16 11.6 0.0 0.39 10.3 0.0 1.6 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding Ubiq_cyt_C_chap PF03981.12 RKO92270.1 - 1.7e-33 115.6 0.1 2.3e-33 115.2 0.1 1.1 1 0 0 1 1 1 1 Ubiquinol-cytochrome C chaperone GST_N_3 PF13417.6 RKO92271.1 - 9.4e-11 42.0 0.0 1.9e-10 41.0 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.6 RKO92271.1 - 6.9e-08 32.7 0.0 1.6e-07 31.5 0.0 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N PF02798.20 RKO92271.1 - 0.0028 18.0 0.1 0.0079 16.5 0.0 1.7 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain ASF1_hist_chap PF04729.13 RKO92273.1 - 2.2e-32 112.1 0.0 2.3e-32 112.0 0.0 1.0 1 0 0 1 1 1 1 ASF1 like histone chaperone UPF0154 PF03672.13 RKO92273.1 - 0.2 11.7 0.0 0.83 9.7 0.0 1.8 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0154) ASF1_hist_chap PF04729.13 RKO92274.1 - 5.2e-25 88.2 0.1 5.6e-25 88.1 0.1 1.0 1 0 0 1 1 1 1 ASF1 like histone chaperone ETF PF01012.21 RKO92275.1 - 1.6e-50 171.5 3.8 1.9e-50 171.3 3.8 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein domain Suv3_N PF18114.1 RKO92276.1 - 0.047 13.8 0.0 0.073 13.2 0.0 1.3 1 0 0 1 1 1 0 Suv3 helical N-terminal domain Sugar-bind PF04198.13 RKO92276.1 - 0.09 11.9 0.0 5.2 6.1 0.0 2.1 2 0 0 2 2 2 0 Putative sugar-binding domain BCAS3 PF12490.8 RKO92277.1 - 0.018 14.6 0.0 0.64 9.5 0.0 2.4 2 0 0 2 2 2 0 Breast carcinoma amplified sequence 3 LEA_2 PF03168.13 RKO92278.1 - 3.9e-07 30.5 0.0 7.5e-07 29.6 0.0 1.5 1 0 0 1 1 1 1 Late embryogenesis abundant protein CDH-cyt PF16010.5 RKO92279.1 - 0.00012 21.9 0.4 0.00019 21.2 0.4 1.3 1 0 0 1 1 1 1 Cytochrome domain of cellobiose dehydrogenase DOMON PF03351.17 RKO92279.1 - 0.00028 21.1 0.1 0.00051 20.2 0.1 1.4 1 0 0 1 1 1 1 DOMON domain Cytochrom_B561 PF03188.16 RKO92279.1 - 0.00076 19.6 9.7 0.00081 19.5 8.2 1.8 1 1 1 2 2 2 1 Eukaryotic cytochrome b561 DUF2427 PF10348.9 RKO92279.1 - 0.78 9.6 13.0 0.54 10.1 4.9 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF2427) Retinal PF15449.6 RKO92282.1 - 0.014 13.2 0.0 0.018 12.9 0.0 1.1 1 0 0 1 1 1 0 Retinal protein Spt4 PF06093.13 RKO92284.1 - 7.2e-26 90.1 0.0 8.7e-26 89.8 0.0 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger LRR_4 PF12799.7 RKO92285.1 - 0.0004 20.7 5.6 3.5 8.2 0.3 5.1 3 1 1 4 4 4 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO92285.1 - 0.009 15.8 2.3 13 5.6 0.0 4.9 5 1 1 6 6 6 2 Leucine rich repeat FNIP PF05725.12 RKO92285.1 - 0.33 11.2 5.6 0.71 10.1 0.0 3.8 4 0 0 4 4 4 0 FNIP Repeat DUF3247 PF11607.8 RKO92286.1 - 0.087 13.1 0.0 0.19 12.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3247) ExoD PF06055.12 RKO92286.1 - 0.45 9.9 6.2 0.37 10.1 2.3 2.2 2 0 0 2 2 2 0 Exopolysaccharide synthesis, ExoD Polyoma_coat2 PF00761.20 RKO92286.1 - 3.2 7.4 9.5 7.2 6.2 9.5 1.5 1 0 0 1 1 1 0 Polyomavirus coat protein ORC6 PF05460.13 RKO92288.1 - 1.2 8.3 7.3 0.1 11.8 2.2 1.8 1 1 1 2 2 2 0 Origin recognition complex subunit 6 (ORC6) FAP206 PF12018.8 RKO92289.1 - 1.3e-69 234.8 0.0 2.2e-69 234.0 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function BTB PF00651.31 RKO92290.1 - 0.0018 18.5 0.0 0.0029 17.8 0.0 1.3 1 1 0 1 1 1 1 BTB/POZ domain XRN_M PF17846.1 RKO92292.1 - 6e-106 355.1 0.8 9.1e-106 354.5 0.8 1.2 1 0 0 1 1 1 1 Xrn1 helical domain XRN_N PF03159.18 RKO92292.1 - 5.5e-93 310.8 0.0 8.7e-93 310.2 0.0 1.3 1 0 0 1 1 1 1 XRN 5'-3' exonuclease N-terminus XRN1_D1 PF18332.1 RKO92292.1 - 2.4e-61 206.9 0.0 4.4e-61 206.0 0.0 1.5 1 0 0 1 1 1 1 Exoribonuclease Xrn1 D1 domain XRN1_D2_D3 PF18334.1 RKO92292.1 - 3e-20 72.2 0.1 1.3e-19 70.1 0.0 2.2 2 0 0 2 2 2 1 Exoribonuclease Xrn1 D2/D3 domain SH3_12 PF18129.1 RKO92292.1 - 1.3e-13 50.8 1.7 2.5e-13 49.9 1.7 1.5 1 0 0 1 1 1 1 Xrn1 SH3-like domain Xrn1_D3 PF18194.1 RKO92292.1 - 1.1e-05 25.4 0.0 2.3e-05 24.4 0.0 1.5 1 0 0 1 1 1 1 Exoribonuclease 1 Domain-3 R3H PF01424.22 RKO92292.1 - 0.019 14.9 0.0 0.056 13.4 0.0 1.8 1 0 0 1 1 1 0 R3H domain peroxidase PF00141.23 RKO92293.1 - 1.2e-18 67.7 0.0 2e-18 66.9 0.0 1.3 1 0 0 1 1 1 1 Peroxidase Ysc84 PF04366.12 RKO92295.1 - 1.4e-43 147.7 0.3 1.9e-43 147.2 0.3 1.2 1 0 0 1 1 1 1 Las17-binding protein actin regulator DUF4246 PF14033.6 RKO92297.1 - 2.7e-21 76.2 0.0 1.4e-12 47.5 0.0 3.2 2 1 1 3 3 3 3 Protein of unknown function (DUF4246) DUF2218 PF09981.9 RKO92297.1 - 0.12 12.7 0.0 0.66 10.4 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2218) DUF4246 PF14033.6 RKO92298.1 - 9.9e-42 143.6 0.0 6.5e-28 98.0 0.0 3.3 1 1 1 2 2 2 2 Protein of unknown function (DUF4246) pPIWI_RE_Y PF18156.1 RKO92301.1 - 0.047 14.1 0.0 0.072 13.5 0.0 1.4 1 0 0 1 1 1 0 pPIWI_RE three-gene island domain Y Cep57_MT_bd PF06657.13 RKO92301.1 - 0.09 13.2 1.8 0.11 13.0 0.9 1.6 2 0 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 IBR PF01485.21 RKO92302.1 - 3.4e-06 27.2 14.6 3.4e-06 27.2 14.6 3.4 3 0 0 3 3 3 1 IBR domain, a half RING-finger domain zf-C3HC4 PF00097.25 RKO92302.1 - 0.0062 16.4 1.7 0.0062 16.4 1.7 4.0 3 2 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 RKO92302.1 - 0.032 14.4 2.1 0.032 14.4 2.1 4.0 3 1 0 3 3 3 0 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 RKO92302.1 - 0.038 13.9 1.0 0.038 13.9 1.0 4.2 3 2 1 4 4 4 0 zinc-RING finger domain zf-C3HC4_2 PF13923.6 RKO92302.1 - 0.21 11.5 0.1 0.21 11.5 0.1 5.4 3 2 2 5 5 5 0 Zinc finger, C3HC4 type (RING finger) F-box-like PF12937.7 RKO92304.1 - 5.4e-09 35.8 0.3 1.2e-08 34.7 0.3 1.6 1 0 0 1 1 1 1 F-box-like F-box-like PF12937.7 RKO92307.1 - 0.065 13.1 0.6 0.15 11.9 0.6 1.6 1 0 0 1 1 1 0 F-box-like PDEase_I PF00233.19 RKO92309.1 - 1.9e-57 194.8 0.0 2.1e-57 194.6 0.0 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase ELO PF01151.18 RKO92310.1 - 2e-44 152.0 18.3 2.3e-44 151.8 18.3 1.0 1 0 0 1 1 1 1 GNS1/SUR4 family DUF2070 PF09843.9 RKO92310.1 - 0.86 7.8 5.2 0.98 7.6 5.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) RT_RNaseH PF17917.1 RKO92313.1 - 0.007 16.6 0.0 0.015 15.5 0.0 1.5 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase Ras PF00071.22 RKO92314.1 - 6.4e-11 42.1 0.0 8.9e-11 41.6 0.0 1.2 1 0 0 1 1 1 1 Ras family DUF905 PF06006.12 RKO92315.1 - 0.084 12.9 0.1 5.7 7.0 0.2 2.2 1 1 0 2 2 2 0 Bacterial protein of unknown function (DUF905) PIN_4 PF13638.6 RKO92315.1 - 0.18 12.1 0.0 0.27 11.5 0.0 1.2 1 0 0 1 1 1 0 PIN domain F-box-like PF12937.7 RKO92317.1 - 5e-07 29.5 0.2 1.5e-06 28.0 0.2 1.8 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO92317.1 - 0.025 14.4 0.1 0.062 13.2 0.1 1.6 1 0 0 1 1 1 0 F-box domain TPR_11 PF13414.6 RKO92318.1 - 1.3e-06 27.9 1.1 0.00083 19.0 0.1 2.4 1 1 1 2 2 2 2 TPR repeat TPR_2 PF07719.17 RKO92318.1 - 5.4e-05 23.0 0.7 0.0017 18.3 0.1 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_1 PF00515.28 RKO92318.1 - 0.00026 20.7 1.4 0.0011 18.6 0.1 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 RKO92318.1 - 0.00059 20.0 1.2 0.0018 18.6 0.1 2.5 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 RKO92318.1 - 0.0018 18.5 3.7 0.085 13.2 0.3 2.2 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO92318.1 - 0.0043 17.7 5.4 0.0055 17.3 1.4 2.7 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 RKO92318.1 - 0.0082 16.0 0.5 0.0082 16.0 0.5 2.8 3 1 0 3 3 3 1 Tetratricopeptide repeat NARP1 PF12569.8 RKO92318.1 - 0.046 12.6 0.1 0.068 12.1 0.1 1.2 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 TPR_9 PF13371.6 RKO92318.1 - 0.098 12.8 4.6 4 7.6 0.2 3.4 1 1 3 4 4 4 0 Tetratricopeptide repeat CD225 PF04505.12 RKO92318.1 - 0.17 12.1 0.9 3.1 8.0 0.0 2.2 2 0 0 2 2 2 0 Interferon-induced transmembrane protein TPR_14 PF13428.6 RKO92318.1 - 0.33 11.9 3.8 13 7.0 0.2 3.1 1 1 1 2 2 2 0 Tetratricopeptide repeat SAICAR_synt PF01259.18 RKO92319.1 - 2.7e-104 348.3 0.0 3.4e-104 347.9 0.0 1.0 1 0 0 1 1 1 1 SAICAR synthetase Glucosamine_iso PF01182.20 RKO92320.1 - 4.3e-72 242.7 0.0 4.9e-72 242.5 0.0 1.0 1 0 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LLC1 PF14945.6 RKO92321.1 - 0.0088 16.6 0.2 6.1 7.5 0.0 2.3 2 0 0 2 2 2 2 Normal lung function maintenance, Low in Lung Cancer 1 protein Fasciclin PF02469.22 RKO92324.1 - 7.7e-06 26.1 0.0 1e-05 25.8 0.0 1.2 1 0 0 1 1 1 1 Fasciclin domain RmuC PF02646.16 RKO92324.1 - 0.17 11.0 0.0 0.22 10.6 0.0 1.1 1 0 0 1 1 1 0 RmuC family Pkinase PF00069.25 RKO92325.1 - 1.1e-12 47.9 0.1 1.2e-12 47.8 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO92325.1 - 1.3e-05 24.6 0.1 1.4e-05 24.6 0.1 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase GCV_T PF01571.21 RKO92326.1 - 4.5e-06 26.2 0.0 0.015 14.7 0.0 2.1 2 0 0 2 2 2 2 Aminomethyltransferase folate-binding domain HAD_2 PF13419.6 RKO92327.1 - 2.8e-15 56.9 0.0 3.4e-15 56.6 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 RKO92327.1 - 1.2e-13 51.8 0.1 1.7e-13 51.4 0.1 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 RKO92327.1 - 7.1e-09 35.6 0.5 1.4e-08 34.7 0.1 1.7 2 0 0 2 2 2 1 HAD-hyrolase-like HAD PF12710.7 RKO92327.1 - 0.0021 18.5 0.0 0.003 18.0 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 RKO92327.1 - 0.011 15.5 0.1 0.017 14.8 0.1 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase S6PP PF05116.13 RKO92327.1 - 0.02 14.4 0.0 0.042 13.4 0.0 1.4 1 0 0 1 1 1 0 Sucrose-6F-phosphate phosphohydrolase SIR2 PF02146.17 RKO92327.1 - 0.028 14.3 0.0 5.5 6.9 0.0 2.1 1 1 1 2 2 2 0 Sir2 family RasGAP PF00616.19 RKO92328.1 - 9.9e-61 205.1 0.0 1.7e-60 204.3 0.0 1.4 1 0 0 1 1 1 1 GTPase-activator protein for Ras-like GTPase CooC_C PF15976.5 RKO92332.1 - 0.053 13.6 0.0 0.29 11.2 0.1 2.1 1 1 1 2 2 2 0 CS1-pili formation C-terminal MHYT PF03707.16 RKO92333.1 - 0.034 14.3 0.9 0.034 14.3 0.9 2.1 2 0 0 2 2 2 0 Bacterial signalling protein N terminal repeat ZZ PF00569.17 RKO92336.1 - 2.2e-10 40.2 5.7 3.8e-10 39.4 5.7 1.4 1 0 0 1 1 1 1 Zinc finger, ZZ type SWIRM PF04433.17 RKO92336.1 - 2e-09 37.6 0.4 1.8e-08 34.6 0.0 2.4 2 0 0 2 2 2 1 SWIRM domain Myb_DNA-binding PF00249.31 RKO92336.1 - 3.3e-09 36.8 0.1 1e-08 35.2 0.1 1.9 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO92336.1 - 9.4e-05 22.6 0.0 0.00022 21.4 0.0 1.6 1 0 0 1 1 1 1 Myb-like DNA-binding domain C1_2 PF03107.16 RKO92336.1 - 0.098 13.0 5.2 0.18 12.2 5.2 1.4 1 0 0 1 1 1 0 C1 domain Histone PF00125.24 RKO92337.1 - 6.2e-18 65.4 0.0 8.6e-18 65.0 0.0 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Histone_H2A_C PF16211.5 RKO92337.1 - 8.7e-13 47.8 0.2 8.7e-13 47.8 0.2 1.5 2 0 0 2 2 2 1 C-terminus of histone H2A CBFD_NFYB_HMF PF00808.23 RKO92337.1 - 7.6e-05 22.9 0.0 0.00013 22.2 0.0 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone PARP PF00644.20 RKO92338.1 - 5.5e-13 48.9 0.0 8.2e-13 48.4 0.0 1.2 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain zf-RING_2 PF13639.6 RKO92338.1 - 4.8e-09 36.4 10.8 1e-08 35.3 10.8 1.6 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 RKO92338.1 - 6.8e-07 29.5 7.8 1.9e-06 28.0 7.8 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 RKO92338.1 - 3.6e-06 26.6 3.3 8e-06 25.5 3.3 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 RKO92338.1 - 5.6e-05 23.0 9.2 0.00011 22.1 9.2 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 RKO92338.1 - 9e-05 22.3 10.6 9e-05 22.3 10.6 1.7 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) DTC PF18102.1 RKO92338.1 - 0.00035 20.7 0.0 0.00067 19.8 0.0 1.5 1 0 0 1 1 1 1 Deltex C-terminal domain zf-C3HC4_2 PF13923.6 RKO92338.1 - 0.00038 20.2 10.9 0.0012 18.7 10.9 1.9 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 RKO92338.1 - 0.0012 18.9 10.7 0.0029 17.6 10.7 1.8 1 0 0 1 1 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 RKO92338.1 - 0.002 18.2 6.0 0.0059 16.6 6.0 1.8 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 RKO92338.1 - 0.051 13.7 9.0 0.78 10.0 9.0 2.4 1 1 0 1 1 1 0 FANCL C-terminal domain zf-C3HC4_3 PF13920.6 RKO92338.1 - 0.063 13.2 7.7 0.13 12.2 7.7 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-Nse PF11789.8 RKO92338.1 - 0.47 10.3 6.8 0.31 10.9 4.6 1.9 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit zf-C3H2C3 PF17122.5 RKO92338.1 - 0.57 10.3 9.3 1.6 8.9 9.3 1.8 1 0 0 1 1 1 0 Zinc-finger zf-UDP PF14569.6 RKO92338.1 - 1.1 9.5 5.0 10 6.3 3.1 2.5 3 0 0 3 3 2 0 Zinc-binding RING-finger Zn_ribbon_17 PF17120.5 RKO92338.1 - 1.5 8.5 6.3 4.1 7.1 6.3 1.8 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type RINGv PF12906.7 RKO92338.1 - 1.6 8.9 8.4 3.3 7.9 8.4 1.6 1 0 0 1 1 1 0 RING-variant domain Prok-RING_4 PF14447.6 RKO92338.1 - 2.7 7.9 9.5 12 5.8 9.5 2.0 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_6 PF14835.6 RKO92338.1 - 6.2 6.8 7.4 28 4.7 7.4 2.0 1 1 0 1 1 1 0 zf-RING of BARD1-type protein SNF2_N PF00176.23 RKO92339.1 - 1e-66 225.1 0.5 1e-66 225.1 0.5 2.5 2 0 0 2 2 2 1 SNF2 family N-terminal domain Helicase_C PF00271.31 RKO92339.1 - 3.1e-18 66.1 0.0 4.6e-17 62.4 0.0 2.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Bromodomain PF00439.25 RKO92339.1 - 3.8e-17 62.1 0.0 9.3e-17 60.9 0.0 1.6 1 0 0 1 1 1 1 Bromodomain HSA PF07529.13 RKO92339.1 - 4.8e-14 52.4 8.1 4.8e-14 52.4 8.1 4.4 4 0 0 4 4 4 1 HSA ResIII PF04851.15 RKO92339.1 - 1.9e-12 47.6 1.4 3e-12 46.9 0.0 2.1 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit SnAC PF14619.6 RKO92339.1 - 3.1e-11 43.7 1.8 3.1e-11 43.7 1.8 4.0 4 0 0 4 4 4 1 Snf2-ATP coupling, chromatin remodelling complex QLQ PF08880.11 RKO92339.1 - 9.1e-10 38.1 3.0 2.7e-09 36.6 3.0 1.9 1 0 0 1 1 1 1 QLQ SWI2_SNF2 PF18766.1 RKO92339.1 - 4.3e-06 26.6 1.4 1.1e-05 25.3 0.0 2.3 2 0 0 2 2 2 1 SWI2/SNF2 ATPase GAGE PF05831.11 RKO92342.1 - 0.00046 20.7 1.0 0.27 11.8 0.4 2.4 2 0 0 2 2 2 2 GAGE protein DotA PF11388.8 RKO92342.1 - 0.031 14.5 0.0 0.064 13.5 0.0 1.5 1 0 0 1 1 1 0 Phagosome trafficking protein DotA DUF1266 PF06889.11 RKO92342.1 - 0.037 14.1 0.4 0.091 12.8 0.2 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1266) Bac_globin PF01152.21 RKO92345.1 - 0.12 12.5 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial-like globin Bac_globin PF01152.21 RKO92346.1 - 0.06 13.5 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial-like globin ATP-synt_E PF05680.12 RKO92347.1 - 0.38 11.1 3.2 0.57 10.6 3.2 1.3 1 0 0 1 1 1 0 ATP synthase E chain DNA_ligase_A_M PF01068.21 RKO92349.1 - 1.7e-15 57.3 0.0 2.9e-15 56.5 0.0 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain RNA_ligase PF09414.10 RKO92349.1 - 0.00042 20.7 0.0 0.0008 19.8 0.0 1.4 1 0 0 1 1 1 1 RNA ligase DNA_ligase_A_C PF04679.15 RKO92349.1 - 0.1 13.2 0.0 0.33 11.6 0.0 1.9 1 0 0 1 1 1 0 ATP dependent DNA ligase C terminal region UME PF08064.13 RKO92350.1 - 2.5e-23 81.9 0.0 6.8e-23 80.5 0.0 1.8 1 0 0 1 1 1 1 UME (NUC010) domain Epimerase PF01370.21 RKO92351.1 - 6.7e-43 146.9 0.0 9.1e-43 146.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 RKO92351.1 - 1.7e-12 47.4 1.7 2.7e-11 43.4 0.0 2.7 1 1 1 2 2 2 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 RKO92351.1 - 2.4e-08 33.4 0.0 4.2e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 RKO92351.1 - 0.0025 17.0 1.7 0.059 12.5 0.1 2.7 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 RKO92351.1 - 0.15 11.2 0.7 13 4.8 0.1 2.1 1 1 0 2 2 2 0 Male sterility protein HSP90 PF00183.18 RKO92352.1 - 0.93 8.3 11.3 1.2 8.0 11.3 1.1 1 0 0 1 1 1 0 Hsp90 protein DUF5427 PF10310.9 RKO92352.1 - 1.7 7.5 15.8 2.1 7.2 15.8 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5427) SRP-alpha_N PF04086.13 RKO92352.1 - 6.3 6.6 17.1 7.3 6.4 17.1 1.0 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal RRM_1 PF00076.22 RKO92353.1 - 1.5e-05 24.7 0.1 3.1e-05 23.7 0.1 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Pox_MCEL PF03291.16 RKO92354.1 - 3.8e-26 92.0 0.2 1.3e-25 90.2 0.2 1.7 1 1 0 1 1 1 1 mRNA capping enzyme Methyltransf_25 PF13649.6 RKO92354.1 - 5e-15 56.0 0.0 2.6e-14 53.7 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 RKO92354.1 - 3.1e-13 49.8 0.0 8.7e-13 48.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain mRNA_cap_enzyme PF01331.19 RKO92354.1 - 1.5e-10 41.2 2.5 1.7e-09 37.8 0.8 2.8 2 1 0 2 2 2 1 mRNA capping enzyme, catalytic domain Methyltransf_11 PF08241.12 RKO92354.1 - 2.6e-10 40.8 0.0 9.8e-10 39.0 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain mRNA_cap_C PF03919.15 RKO92354.1 - 5.4e-10 39.9 0.2 1.4e-09 38.6 0.2 1.7 1 0 0 1 1 1 1 mRNA capping enzyme, C-terminal domain Methyltransf_12 PF08242.12 RKO92354.1 - 2.2e-09 37.9 0.0 8.9e-09 36.0 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 RKO92354.1 - 0.00012 21.9 0.0 0.00024 21.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain DNA_ligase_A_M PF01068.21 RKO92354.1 - 0.028 14.0 0.6 1.5 8.5 0.1 2.5 1 1 1 2 2 2 0 ATP dependent DNA ligase domain Methyltransf_32 PF13679.6 RKO92354.1 - 0.045 13.7 0.0 0.12 12.3 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain YfkB PF08756.10 RKO92354.1 - 0.047 13.5 0.5 0.099 12.4 0.5 1.5 1 0 0 1 1 1 0 YfkB-like domain Extensin-like_C PF06904.12 RKO92355.1 - 0.004 17.2 0.0 0.0083 16.2 0.0 1.5 1 0 0 1 1 1 1 Extensin-like protein C-terminus DUF1687 PF07955.11 RKO92355.1 - 0.27 11.7 1.2 0.74 10.3 1.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1687) KxDL PF10241.9 RKO92356.1 - 3.7e-15 56.0 3.2 3.9e-14 52.7 2.2 2.0 2 0 0 2 2 2 1 Uncharacterized conserved protein DUF4166 PF13761.6 RKO92356.1 - 0.031 14.1 0.2 0.042 13.6 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4166) Formyl_trans_N PF00551.19 RKO92356.1 - 0.13 12.0 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Formyl transferase UCR_14kD PF02271.16 RKO92357.1 - 8.5e-30 102.7 0.0 1e-29 102.4 0.0 1.1 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase complex 14kD subunit DUF1845 PF08900.11 RKO92357.1 - 0.032 14.0 0.0 3.5 7.3 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1845) PaaX PF07848.12 RKO92358.1 - 0.17 12.1 0.0 0.51 10.6 0.0 1.8 1 0 0 1 1 1 0 PaaX-like protein NOA36 PF06524.12 RKO92363.1 - 1.7 7.9 7.1 2.2 7.5 7.1 1.1 1 0 0 1 1 1 0 NOA36 protein DUF4637 PF15470.6 RKO92363.1 - 2.8 7.7 8.4 3.9 7.2 8.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4637) ICMT PF04140.14 RKO92366.1 - 1.2e-11 44.9 0.1 1.4e-11 44.7 0.1 1.1 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 RKO92366.1 - 0.012 16.0 0.1 0.015 15.7 0.1 1.1 1 0 0 1 1 1 0 Phospholipid methyltransferase Zfx_Zfy_act PF04704.13 RKO92367.1 - 0.15 11.1 0.8 0.26 10.4 0.1 1.6 2 0 0 2 2 2 0 Zfx / Zfy transcription activation region IGFBP PF00219.18 RKO92368.1 - 0.0087 16.7 12.1 0.73 10.5 0.5 3.2 3 0 0 3 3 3 2 Insulin-like growth factor binding protein Inositol_P PF00459.25 RKO92368.1 - 0.048 13.2 0.0 0.074 12.6 0.0 1.3 1 0 0 1 1 1 0 Inositol monophosphatase family SCA7 PF08313.12 RKO92368.1 - 0.12 12.2 7.5 0.22 11.5 0.1 2.9 3 0 0 3 3 3 0 SCA7, zinc-binding domain Colipase_C PF02740.14 RKO92368.1 - 0.59 10.4 15.0 2.4 8.4 0.1 4.2 5 0 0 5 5 5 0 Colipase, C-terminal domain Toxin_7 PF05980.12 RKO92368.1 - 2.7 8.3 9.3 3.8 7.9 0.2 3.2 3 0 0 3 3 3 0 Toxin 7 SNF2_N PF00176.23 RKO92374.1 - 1.9e-38 132.1 0.0 9e-38 129.9 0.0 1.7 1 1 1 2 2 2 1 SNF2 family N-terminal domain ResIII PF04851.15 RKO92374.1 - 8.2e-08 32.4 0.0 1.3e-07 31.8 0.0 1.2 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 RKO92374.1 - 0.0002 21.2 0.0 0.00032 20.5 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase BssB_TutG PF18512.1 RKO92374.1 - 0.0078 16.1 0.3 0.02 14.8 0.3 1.6 1 0 0 1 1 1 1 Benzylsuccinate synthase beta subunit RabGAP-TBC PF00566.18 RKO92375.1 - 1.3e-26 93.6 0.1 1.6e-26 93.3 0.1 1.0 1 0 0 1 1 1 1 Rab-GTPase-TBC domain DFP PF04127.15 RKO92376.1 - 1.9e-14 53.9 0.0 2.6e-06 27.4 0.0 2.1 2 0 0 2 2 2 2 DNA / pantothenate metabolism flavoprotein Tubulin PF00091.25 RKO92378.1 - 2.7e-68 230.1 0.0 3.7e-68 229.6 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 RKO92378.1 - 8.4e-52 174.6 0.0 1.3e-51 174.0 0.0 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 RKO92378.1 - 0.00079 19.2 0.0 0.0014 18.4 0.0 1.5 1 0 0 1 1 1 1 Tubulin domain AA_permease_2 PF13520.6 RKO92380.1 - 9.2e-32 110.4 14.5 1e-31 110.3 14.5 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 RKO92380.1 - 2.3e-16 59.5 11.0 2.8e-16 59.2 11.0 1.0 1 0 0 1 1 1 1 Amino acid permease Bromodomain PF00439.25 RKO92383.1 - 1.8e-23 82.4 0.0 2.2e-23 82.1 0.0 1.1 1 0 0 1 1 1 1 Bromodomain Brix PF04427.18 RKO92385.1 - 1.4e-31 110.2 0.1 1.9e-31 109.7 0.1 1.2 1 0 0 1 1 1 1 Brix domain DnaJ PF00226.31 RKO92387.1 - 3.8e-05 23.7 0.0 7e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 DnaJ domain ABC2_membrane_3 PF12698.7 RKO92390.1 - 1e-11 44.6 10.7 1.6e-11 43.9 10.7 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.27 RKO92390.1 - 1.7e-05 25.3 0.0 3e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 RKO92390.1 - 0.0044 16.7 0.0 0.01 15.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 RKO92390.1 - 0.081 13.3 0.0 0.17 12.2 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 RKO92390.1 - 0.13 12.2 0.0 0.33 10.8 0.0 1.7 1 0 0 1 1 1 0 RsgA GTPase AAA_21 PF13304.6 RKO92390.1 - 0.37 10.6 3.7 2.1 8.1 1.0 2.2 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system 5TM-5TMR_LYT PF07694.12 RKO92390.1 - 0.69 9.4 7.7 1.1 8.7 7.7 1.4 1 0 0 1 1 1 0 5TMR of 5TMR-LYT tRNA_int_end_N2 PF12928.7 RKO92392.1 - 5.7e-15 55.2 0.2 1e-14 54.4 0.2 1.3 1 0 0 1 1 1 1 tRNA-splicing endonuclease subunit sen54 N-term Ank_5 PF13857.6 RKO92395.1 - 6.6e-06 26.3 0.1 0.047 14.0 0.0 2.6 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO92395.1 - 0.0085 16.7 0.1 0.017 15.7 0.1 1.6 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO92395.1 - 0.024 15.2 0.0 0.086 13.4 0.0 1.6 1 1 0 1 1 1 0 Ankyrin repeats (3 copies) Ank_3 PF13606.6 RKO92395.1 - 0.036 14.6 0.1 15 6.5 0.0 2.7 2 1 0 2 2 2 0 Ankyrin repeat DUF295 PF03478.18 RKO92395.1 - 0.073 12.7 0.7 0.31 10.7 0.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF295) Fer4_6 PF12837.7 RKO92395.1 - 9.2 6.5 7.8 19 5.5 0.0 2.9 2 1 1 3 3 3 0 4Fe-4S binding domain Arrestin_C PF02752.22 RKO92396.1 - 1.9e-12 47.8 1.4 3.7e-12 46.8 1.4 1.5 1 0 0 1 1 1 1 Arrestin (or S-antigen), C-terminal domain Rgp1 PF08737.10 RKO92396.1 - 2.5e-06 27.0 0.1 3.2e-06 26.6 0.1 1.1 1 0 0 1 1 1 1 Rgp1 Spo0M PF07070.11 RKO92396.1 - 0.00085 18.9 1.8 0.0015 18.2 1.8 1.3 1 0 0 1 1 1 1 SpoOM protein LRR_6 PF13516.6 RKO92399.1 - 0.044 13.8 0.1 0.21 11.7 0.1 2.2 2 0 0 2 2 2 0 Leucine Rich repeat Ank_5 PF13857.6 RKO92402.1 - 7.9e-05 22.9 0.1 0.00023 21.4 0.0 1.8 2 0 0 2 2 2 1 Ankyrin repeats (many copies) DUF4916 PF16262.5 RKO92402.1 - 0.12 11.8 0.8 0.26 10.8 0.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4916) Amino_oxidase PF01593.24 RKO92403.1 - 5.6e-38 131.4 0.0 6.2e-38 131.2 0.0 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Prefoldin_2 PF01920.20 RKO92405.1 - 5.5e-25 87.4 10.7 6e-25 87.2 10.7 1.0 1 0 0 1 1 1 1 Prefoldin subunit DMPK_coil PF08826.10 RKO92405.1 - 0.00022 21.3 3.5 0.00022 21.3 3.5 2.4 2 1 0 2 2 2 1 DMPK coiled coil domain like DUF1192 PF06698.11 RKO92405.1 - 0.0041 17.1 1.5 0.0041 17.1 1.5 2.1 2 1 0 2 2 2 1 Protein of unknown function (DUF1192) Prefoldin_3 PF13758.6 RKO92405.1 - 0.0072 16.4 4.6 0.0088 16.1 4.6 1.1 1 0 0 1 1 1 1 Prefoldin subunit BMFP PF04380.13 RKO92405.1 - 0.016 15.6 1.3 0.016 15.6 1.3 2.2 2 0 0 2 2 2 0 Membrane fusogenic activity Spc24 PF08286.11 RKO92405.1 - 0.018 15.3 9.9 0.52 10.6 1.4 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 DUF4164 PF13747.6 RKO92405.1 - 0.025 14.9 4.0 1.1 9.6 0.5 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) DivIC PF04977.15 RKO92405.1 - 0.027 14.2 10.5 0.23 11.3 2.3 2.6 2 1 0 2 2 2 0 Septum formation initiator ABC_tran_CTD PF16326.5 RKO92405.1 - 0.029 14.6 10.0 0.085 13.1 1.7 2.6 2 1 0 2 2 2 0 ABC transporter C-terminal domain DUF4349 PF14257.6 RKO92405.1 - 0.046 13.2 0.5 0.046 13.2 0.5 1.8 1 1 0 2 2 2 0 Domain of unknown function (DUF4349) PHM7_cyt PF14703.6 RKO92405.1 - 0.058 13.6 1.9 0.086 13.1 1.9 1.3 1 1 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter DUF1843 PF08898.10 RKO92405.1 - 0.069 13.7 3.9 2 9.0 0.2 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF1843) Tup_N PF08581.10 RKO92405.1 - 0.15 12.3 7.9 5.4 7.4 0.8 3.0 2 1 1 3 3 3 0 Tup N-terminal Occludin_ELL PF07303.13 RKO92405.1 - 0.16 12.8 3.7 1.3 9.8 0.6 2.0 1 1 0 2 2 2 0 Occludin homology domain Siah-Interact_N PF09032.11 RKO92405.1 - 0.16 12.3 6.8 1.3 9.4 1.0 2.4 2 0 0 2 2 2 0 Siah interacting protein, N terminal FlxA PF14282.6 RKO92405.1 - 0.33 10.9 9.9 0.17 11.9 0.8 2.1 2 0 0 2 2 2 0 FlxA-like protein Lzipper-MIP1 PF14389.6 RKO92405.1 - 0.38 11.1 6.5 6.4 7.1 6.5 2.2 1 1 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 FlaC_arch PF05377.11 RKO92405.1 - 0.47 10.9 6.8 15 6.1 0.4 3.1 2 2 0 2 2 2 0 Flagella accessory protein C (FlaC) DHR10 PF18595.1 RKO92405.1 - 0.57 10.2 12.2 0.59 10.2 2.6 2.0 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain Osmo_CC PF08946.10 RKO92405.1 - 0.61 10.4 3.7 1.1 9.6 0.3 2.6 2 1 1 3 3 3 0 Osmosensory transporter coiled coil End3 PF12761.7 RKO92405.1 - 0.82 9.8 7.7 1.2 9.3 7.7 1.3 1 1 0 1 1 1 0 Actin cytoskeleton-regulatory complex protein END3 Csm1_N PF18504.1 RKO92405.1 - 1.4 9.3 10.8 1.6 9.1 1.4 2.4 1 1 0 2 2 2 0 Csm1 N-terminal domain SlyX PF04102.12 RKO92405.1 - 1.5 9.5 8.5 0.59 10.8 0.5 2.3 2 0 0 2 2 2 0 SlyX ZapB PF06005.12 RKO92405.1 - 2.8 8.5 11.5 4 8.0 2.8 2.1 2 0 0 2 2 2 0 Cell division protein ZapB APG6_N PF17675.1 RKO92405.1 - 3.3 8.3 11.2 5.9 7.4 2.7 2.0 1 1 1 2 2 2 0 Apg6 coiled-coil region YabA PF06156.13 RKO92405.1 - 3.3 8.4 7.4 11 6.7 0.9 2.1 2 0 0 2 2 2 0 Initiation control protein YabA MMR_HSR1 PF01926.23 RKO92406.1 - 1.3e-06 28.5 0.0 8e-06 25.9 0.0 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 RKO92406.1 - 0.00012 22.0 0.2 0.0028 17.6 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 RKO92406.1 - 0.054 13.9 0.0 0.14 12.5 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain FeoB_N PF02421.18 RKO92406.1 - 0.13 11.8 0.2 2.4 7.7 0.1 2.7 3 0 0 3 3 3 0 Ferrous iron transport protein B Ank_2 PF12796.7 RKO92407.1 - 5.3e-09 36.5 0.0 0.082 13.5 0.0 4.2 4 0 0 4 4 4 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO92407.1 - 7.6e-08 32.5 0.0 0.34 11.3 0.0 4.8 4 0 0 4 4 4 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO92407.1 - 9.7e-07 29.2 0.4 0.98 10.1 0.0 5.1 6 0 0 6 6 6 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO92407.1 - 1.4e-05 25.1 0.3 14 6.6 0.0 5.3 6 0 0 6 6 6 2 Ankyrin repeat Ank_2 PF12796.7 RKO92408.1 - 4.6e-08 33.6 0.1 0.019 15.5 0.0 5.0 5 0 0 5 5 5 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO92408.1 - 7.4e-05 23.2 3.4 0.74 10.5 0.1 5.6 6 0 0 6 6 6 1 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO92408.1 - 0.00061 20.0 2.3 51 4.9 0.1 5.8 7 0 0 7 7 7 2 Ankyrin repeat zf-H2C2_5 PF13909.6 RKO92409.1 - 0.086 12.6 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 C2H2-type zinc-finger domain zf-TRAF PF02176.18 RKO92412.1 - 1.7e-12 47.8 17.3 4e-08 33.8 4.4 3.6 1 1 2 3 3 3 3 TRAF-type zinc finger zf-C3HC4_2 PF13923.6 RKO92412.1 - 1.7e-06 27.7 9.6 1.7e-06 27.7 9.6 3.6 3 1 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 RKO92412.1 - 6.7e-06 26.3 8.9 6.7e-06 26.3 8.9 3.9 3 1 1 4 4 4 1 Ring finger domain zf-RING_UBOX PF13445.6 RKO92412.1 - 1.1e-05 25.3 12.6 1.1e-05 25.3 12.6 2.8 2 1 0 2 2 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 RKO92412.1 - 2.2e-05 24.2 8.7 2.2e-05 24.2 8.7 3.6 3 1 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf_UBZ PF18439.1 RKO92412.1 - 3.1e-05 23.5 1.2 0.089 12.4 0.1 3.3 3 0 0 3 3 3 2 Ubiquitin-Binding Zinc Finger zf-C3HC4_3 PF13920.6 RKO92412.1 - 0.00014 21.7 5.7 0.00014 21.7 5.7 3.3 3 1 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 RKO92412.1 - 0.00064 19.8 10.3 0.00064 19.8 10.3 2.6 2 1 0 2 2 1 1 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 RKO92412.1 - 0.00069 19.5 6.8 0.00069 19.5 6.8 3.3 3 0 0 3 3 3 1 zinc-RING finger domain zf-TRAF_2 PF15965.5 RKO92412.1 - 0.0013 19.2 19.7 0.0032 17.9 0.7 3.9 2 1 2 4 4 4 3 TRAF-like zinc-finger Sina PF03145.16 RKO92412.1 - 0.0038 17.2 0.5 0.0038 17.2 0.5 3.5 1 1 3 4 4 4 1 Seven in absentia protein family HALZ PF02183.18 RKO92412.1 - 0.031 14.5 0.5 0.14 12.4 0.0 2.3 2 1 1 3 3 3 0 Homeobox associated leucine zipper APG6_N PF17675.1 RKO92412.1 - 0.073 13.6 2.2 1.6 9.3 1.3 2.2 2 0 0 2 2 2 0 Apg6 coiled-coil region DivIC PF04977.15 RKO92412.1 - 0.08 12.7 0.6 0.49 10.2 0.0 2.1 2 0 0 2 2 2 0 Septum formation initiator DprA_WH PF17782.1 RKO92412.1 - 0.085 13.0 8.9 0.1 12.8 4.2 2.6 2 0 0 2 2 2 0 DprA winged helix domain SlyX PF04102.12 RKO92412.1 - 0.088 13.4 0.4 0.088 13.4 0.4 2.4 2 1 0 2 2 2 0 SlyX HMMR_C PF15908.5 RKO92412.1 - 0.18 12.0 0.0 2.3 8.5 0.0 2.1 2 0 0 2 2 2 0 Hyaluronan mediated motility receptor C-terminal DivIVA PF05103.13 RKO92412.1 - 0.19 11.8 0.1 2.6 8.1 0.0 2.1 2 0 0 2 2 2 0 DivIVA protein Prok-RING_4 PF14447.6 RKO92412.1 - 3.1 7.7 21.9 0.063 13.1 6.9 3.7 2 1 0 2 2 2 0 Prokaryotic RING finger family 4 KfrA_N PF11740.8 RKO92412.1 - 4.1 8.1 9.2 3.1 8.5 1.5 2.3 1 1 1 2 2 2 0 Plasmid replication region DNA-binding N-term Reprolysin_5 PF13688.6 RKO92413.1 - 4.6e-16 59.6 0.3 1.2e-14 55.0 0.3 2.2 1 1 0 1 1 1 1 Metallo-peptidase family M12 Reprolysin_2 PF13574.6 RKO92413.1 - 9.1e-13 48.5 0.1 1.6e-12 47.7 0.1 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin PF01421.19 RKO92413.1 - 5.5e-11 42.8 0.0 7.7e-11 42.3 0.0 1.3 1 0 0 1 1 1 1 Reprolysin (M12B) family zinc metalloprotease Reprolysin_3 PF13582.6 RKO92413.1 - 2.9e-09 37.5 1.4 2.2e-08 34.7 1.4 2.2 1 1 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Reprolysin_4 PF13583.6 RKO92413.1 - 1.2e-06 28.4 0.1 1.9e-06 27.7 0.1 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M10 PF00413.24 RKO92413.1 - 0.0041 17.0 0.6 0.008 16.0 0.3 1.5 1 1 0 1 1 1 1 Matrixin Peptidase_M57 PF12388.8 RKO92413.1 - 0.011 15.3 0.1 0.019 14.5 0.1 1.3 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase WLM PF08325.10 RKO92413.1 - 0.048 13.7 0.1 0.096 12.7 0.1 1.4 1 0 0 1 1 1 0 WLM domain Peptidase_M66 PF10462.9 RKO92413.1 - 0.15 11.0 0.1 0.25 10.3 0.1 1.3 1 0 0 1 1 1 0 Peptidase M66 Peptidase_C48 PF02902.19 RKO92416.1 - 1.9e-14 54.1 0.5 2.5e-14 53.7 0.5 1.1 1 0 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain UME PF08064.13 RKO92417.1 - 0.091 12.7 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 UME (NUC010) domain ABC_tran PF00005.27 RKO92418.1 - 3.5e-45 153.9 0.4 4.5e-21 75.8 0.1 2.8 3 0 0 3 3 2 2 ABC transporter ABC_tran_Xtn PF12848.7 RKO92418.1 - 5.2e-25 87.3 0.6 5.2e-25 87.3 0.6 2.0 2 0 0 2 2 1 1 ABC transporter AAA_21 PF13304.6 RKO92418.1 - 1.6e-13 51.2 0.5 0.0023 17.8 0.0 4.4 3 1 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 RKO92418.1 - 7.2e-13 48.5 0.1 2.7e-05 23.7 0.0 3.2 2 1 1 3 3 3 3 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 RKO92418.1 - 2.2e-08 34.2 0.1 0.0035 17.3 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase AAA_29 PF13555.6 RKO92418.1 - 2e-07 30.6 0.2 0.0094 15.7 0.2 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 RKO92418.1 - 2.5e-06 27.5 0.1 0.054 13.6 0.1 2.7 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_16 PF13191.6 RKO92418.1 - 2.8e-06 27.8 0.4 0.11 12.9 0.1 2.5 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 RKO92418.1 - 7.5e-06 26.3 0.2 0.22 11.8 0.0 3.0 2 2 0 2 2 2 2 AAA domain AAA_33 PF13671.6 RKO92418.1 - 2.7e-05 24.4 0.2 0.27 11.4 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_23 PF13476.6 RKO92418.1 - 4e-05 24.2 11.9 0.06 13.9 0.1 4.0 4 0 0 4 4 4 2 AAA domain NACHT PF05729.12 RKO92418.1 - 0.00043 20.2 0.1 0.23 11.3 0.0 2.6 2 0 0 2 2 2 1 NACHT domain AAA_15 PF13175.6 RKO92418.1 - 0.00047 20.0 6.4 0.4 10.3 0.1 3.3 2 1 0 3 3 3 2 AAA ATPase domain AAA PF00004.29 RKO92418.1 - 0.00055 20.4 0.1 0.53 10.7 0.0 3.0 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MeaB PF03308.16 RKO92418.1 - 0.0006 18.9 0.1 0.63 9.0 0.0 2.4 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_24 PF13479.6 RKO92418.1 - 0.0021 17.8 0.1 2.3 7.9 0.2 2.4 2 0 0 2 2 2 2 AAA domain AAA_27 PF13514.6 RKO92418.1 - 0.0037 16.9 0.4 1.6 8.3 0.0 2.7 2 1 0 2 2 2 1 AAA domain AAA_18 PF13238.6 RKO92418.1 - 0.0056 17.2 0.2 1.5 9.4 0.0 2.7 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.22 RKO92418.1 - 0.0069 15.6 0.3 0.5 9.5 0.0 2.3 2 0 0 2 2 2 1 NB-ARC domain AAA_28 PF13521.6 RKO92418.1 - 0.0072 16.6 4.0 1.3 9.2 0.0 3.4 3 1 1 4 4 3 1 AAA domain RNA_helicase PF00910.22 RKO92418.1 - 0.011 16.1 0.1 9.2 6.7 0.1 2.5 2 0 0 2 2 2 0 RNA helicase AAA_25 PF13481.6 RKO92418.1 - 0.011 15.3 0.2 4.4 6.8 0.1 2.7 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 RKO92418.1 - 0.015 15.0 0.4 3.2 7.4 0.1 3.2 3 1 0 3 3 2 0 AAA domain IstB_IS21 PF01695.17 RKO92418.1 - 0.017 14.9 0.0 3.9 7.2 0.0 2.7 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF87 PF01935.17 RKO92418.1 - 0.019 15.1 0.3 2.9 7.9 0.0 2.7 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_14 PF13173.6 RKO92418.1 - 0.024 14.7 0.2 1.6 8.7 0.0 2.8 2 0 0 2 2 2 0 AAA domain Roc PF08477.13 RKO92418.1 - 0.028 14.7 0.6 13 6.0 0.0 2.8 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 RKO92418.1 - 0.029 14.4 3.8 1.9 8.5 0.1 3.1 3 1 0 3 3 3 0 Dynamin family DUF815 PF05673.13 RKO92418.1 - 0.036 13.2 0.1 0.48 9.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF815) SRP54 PF00448.22 RKO92418.1 - 0.058 13.0 0.2 4.9 6.7 0.2 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain NTPase_1 PF03266.15 RKO92418.1 - 0.069 13.1 0.2 9.8 6.1 0.1 2.4 2 0 0 2 2 2 0 NTPase SbcCD_C PF13558.6 RKO92418.1 - 0.073 13.3 0.4 1.4 9.2 0.2 2.9 2 1 0 2 2 1 0 Putative exonuclease SbcCD, C subunit Septin PF00735.18 RKO92418.1 - 0.091 12.0 0.1 9.1 5.5 0.0 2.2 2 0 0 2 2 2 0 Septin FeoB_N PF02421.18 RKO92418.1 - 0.092 12.3 0.1 9.4 5.7 0.2 2.4 2 0 0 2 2 2 0 Ferrous iron transport protein B Ploopntkinase3 PF18751.1 RKO92418.1 - 0.093 12.6 0.1 16 5.4 0.0 2.7 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 AAA_5 PF07728.14 RKO92418.1 - 0.099 12.6 0.5 19 5.3 0.0 3.1 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) Biotin_carb_N PF00289.22 RKO92418.1 - 0.1 13.1 0.0 0.68 10.5 0.0 2.2 2 0 0 2 2 2 0 Biotin carboxylase, N-terminal domain cobW PF02492.19 RKO92418.1 - 0.13 11.9 1.6 15 5.2 0.0 2.8 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 RKO92418.1 - 0.14 11.7 0.1 10 5.6 0.0 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region ATPase_2 PF01637.18 RKO92418.1 - 0.16 11.8 0.2 3.9 7.3 0.1 2.2 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Ubiquitin_4 PF18036.1 RKO92419.1 - 6.8e-07 29.2 0.0 9.5e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-like domain BTB PF00651.31 RKO92420.1 - 0.00068 19.9 0.0 0.0014 18.8 0.0 1.5 1 0 0 1 1 1 1 BTB/POZ domain Nop14 PF04147.12 RKO92420.1 - 0.0089 14.3 12.8 0.013 13.8 12.8 1.1 1 0 0 1 1 1 1 Nop14-like family SDA1 PF05285.12 RKO92420.1 - 0.073 12.5 17.0 0.12 11.7 17.0 1.3 1 0 0 1 1 1 0 SDA1 BUD22 PF09073.10 RKO92420.1 - 0.26 10.6 20.1 0.44 9.8 20.1 1.3 1 0 0 1 1 1 0 BUD22 Vfa1 PF08432.10 RKO92420.1 - 1.3 9.3 5.2 2.5 8.4 5.2 1.5 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 SAPS PF04499.15 RKO92420.1 - 2.8 6.6 5.0 4 6.1 5.0 1.3 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein DUF4746 PF15928.5 RKO92420.1 - 4.3 6.7 8.3 8.3 5.7 8.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4746) Septin PF00735.18 RKO92421.1 - 4.9e-108 360.7 0.4 6.2e-108 360.3 0.4 1.0 1 0 0 1 1 1 1 Septin MMR_HSR1 PF01926.23 RKO92421.1 - 2.4e-09 37.3 0.2 6.7e-09 35.8 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase AIG1 PF04548.16 RKO92421.1 - 1.1e-05 24.9 0.0 2.3e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 AIG1 family RsgA_GTPase PF03193.16 RKO92421.1 - 1.3e-05 25.2 1.5 3.1e-05 23.9 0.5 2.0 2 0 0 2 2 2 1 RsgA GTPase FtsK_SpoIIIE PF01580.18 RKO92421.1 - 0.00035 20.0 0.0 0.00061 19.2 0.0 1.3 1 0 0 1 1 1 1 FtsK/SpoIIIE family Roc PF08477.13 RKO92421.1 - 0.00099 19.3 0.0 0.0019 18.4 0.0 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase NB-ARC PF00931.22 RKO92421.1 - 0.001 18.4 0.0 0.0017 17.6 0.0 1.4 1 0 0 1 1 1 1 NB-ARC domain Dynamin_N PF00350.23 RKO92421.1 - 0.0013 18.8 0.8 0.26 11.3 0.3 2.5 1 1 1 2 2 2 1 Dynamin family Ras PF00071.22 RKO92421.1 - 0.004 16.8 0.1 0.0083 15.7 0.1 1.5 1 0 0 1 1 1 1 Ras family GTP_EFTU PF00009.27 RKO92421.1 - 0.005 16.4 0.3 0.045 13.3 0.1 2.2 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain AAA_22 PF13401.6 RKO92421.1 - 0.0068 16.7 0.0 0.014 15.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_7 PF12775.7 RKO92421.1 - 0.011 15.2 1.0 0.02 14.4 0.2 1.8 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_16 PF13191.6 RKO92421.1 - 0.014 15.8 0.1 0.021 15.2 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain DUF815 PF05673.13 RKO92421.1 - 0.021 14.0 0.1 0.099 11.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF815) T2SSE PF00437.20 RKO92421.1 - 0.032 13.3 1.2 0.04 13.0 0.3 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein ABC_tran PF00005.27 RKO92421.1 - 0.033 14.7 1.4 0.12 12.9 1.5 1.9 1 1 0 1 1 1 0 ABC transporter DUF87 PF01935.17 RKO92421.1 - 0.054 13.6 0.1 0.1 12.7 0.1 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain TniB PF05621.11 RKO92421.1 - 0.061 12.7 0.0 0.13 11.6 0.0 1.5 1 0 0 1 1 1 0 Bacterial TniB protein Gtr1_RagA PF04670.12 RKO92421.1 - 0.077 12.3 0.2 2.2 7.6 0.0 2.3 2 0 0 2 2 2 0 Gtr1/RagA G protein conserved region AAA_29 PF13555.6 RKO92421.1 - 0.16 11.7 0.1 0.31 10.8 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Neurochondrin PF05536.11 RKO92423.1 - 2.4e-56 191.3 0.0 1.6e-30 106.0 0.2 2.4 2 1 0 2 2 2 2 Neurochondrin Alpha-amylase_C PF02806.18 RKO92424.1 - 0.048 14.1 0.1 0.11 12.9 0.0 1.6 2 0 0 2 2 2 0 Alpha amylase, C-terminal all-beta domain NAM-associated PF14303.6 RKO92425.1 - 0.0083 16.9 1.8 0.009 16.7 1.8 1.1 1 0 0 1 1 1 1 No apical meristem-associated C-terminal domain AMP-binding PF00501.28 RKO92427.1 - 4e-41 141.0 0.9 1.5e-32 112.8 0.2 3.1 2 1 1 3 3 3 3 AMP-binding enzyme AMP-binding_C PF13193.6 RKO92427.1 - 3.9e-19 69.4 0.0 1.8e-18 67.3 0.0 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 RKO92427.1 - 1.1e-17 63.7 0.1 2.4e-17 62.6 0.1 1.6 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus CBM_14 PF01607.24 RKO92430.1 - 1.3 9.3 38.3 2.1 8.6 0.9 7.8 6 1 2 8 8 8 0 Chitin binding Peritrophin-A domain RANK_CRD_2 PF18278.1 RKO92430.1 - 2.5 8.3 50.3 0.11 12.7 3.1 7.4 7 0 0 7 7 7 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 PI3K_rbd PF00794.18 RKO92431.1 - 0.12 12.6 0.1 0.15 12.2 0.1 1.2 1 0 0 1 1 1 0 PI3-kinase family, ras-binding domain EF-hand_7 PF13499.6 RKO92432.1 - 1.4e-16 60.7 9.1 8.6e-10 38.9 2.2 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 RKO92432.1 - 3.1e-16 57.6 7.6 3.5e-06 26.2 0.9 3.9 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 RKO92432.1 - 5.6e-15 53.9 5.9 4.7e-05 23.0 0.3 4.2 4 0 0 4 4 4 3 EF-hand domain EF-hand_5 PF13202.6 RKO92432.1 - 2.6e-14 51.9 5.9 7.1e-05 22.1 0.1 4.1 4 0 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 RKO92432.1 - 1.3e-09 37.7 12.7 1.4e-05 24.8 1.6 3.3 2 2 1 3 3 3 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 RKO92432.1 - 0.0024 18.2 1.1 0.093 13.0 0.2 2.6 2 1 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region Sugar_tr PF00083.24 RKO92433.1 - 2.4e-48 165.1 19.7 6.5e-48 163.7 19.7 1.6 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 RKO92433.1 - 1.1e-28 100.2 19.0 7.7e-21 74.4 6.9 2.1 2 0 0 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 RKO92433.1 - 6.7e-05 22.3 3.6 6.7e-05 22.3 3.6 2.2 2 1 0 2 2 2 1 Uncharacterised MFS-type transporter YbfB DUF3522 PF12036.8 RKO92434.1 - 9.4e-05 22.8 2.8 0.0006 20.2 2.8 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF3522) YqjK PF13997.6 RKO92434.1 - 0.16 12.2 3.8 0.39 11.0 0.9 2.4 2 0 0 2 2 2 0 YqjK-like protein zf-met2 PF12907.7 RKO92435.1 - 6.5e-15 55.0 1.0 1.1e-14 54.3 1.0 1.4 1 0 0 1 1 1 1 Zinc-binding Ubiq_cyt_C_chap PF03981.12 RKO92435.1 - 0.056 13.5 0.0 0.061 13.4 0.0 1.1 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone zf-C2HC_2 PF13913.6 RKO92435.1 - 0.24 11.4 1.6 0.88 9.6 1.6 2.0 1 1 0 1 1 1 0 zinc-finger of a C2HC-type 4F5 PF04419.14 RKO92435.1 - 0.31 11.9 8.3 1.5 9.8 6.4 2.5 2 1 0 2 2 2 0 4F5 protein family G-alpha PF00503.20 RKO92436.1 - 2.4e-14 53.3 0.0 3e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 G-protein alpha subunit DUF5320 PF17253.2 RKO92439.1 - 0.016 16.3 0.5 0.21 12.7 0.0 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Fez1 PF06818.15 RKO92439.1 - 0.048 14.1 0.7 0.073 13.5 0.7 1.2 1 0 0 1 1 1 0 Fez1 HTH_16 PF12645.7 RKO92439.1 - 0.14 12.3 0.1 0.25 11.4 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF3837 PF12939.7 RKO92439.1 - 0.18 12.3 1.0 2.5 8.5 0.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF3837) PY_rept_46 PF09689.10 RKO92439.1 - 0.31 11.6 1.4 4.1 8.0 0.2 2.3 2 0 0 2 2 2 0 Plasmodium yoelii repeat (PY_rept_46) DUF3431 PF11913.8 RKO92440.1 - 0.11 12.2 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3431) Astro_capsid_p PF12226.8 RKO92442.1 - 0.36 9.9 7.5 0.87 8.7 1.9 2.0 2 0 0 2 2 2 0 Turkey astrovirus capsid protein E7 PF00527.18 RKO92442.1 - 1.8 8.8 7.6 14 6.0 0.1 2.5 2 1 0 2 2 2 0 E7 protein, Early protein CTD PF12815.7 RKO92443.1 - 6.7e-05 23.4 2.2 0.00023 21.6 1.4 2.4 2 0 0 2 2 2 1 Spt5 C-terminal nonapeptide repeat binding Spt4 PE PF00934.20 RKO92443.1 - 0.11 12.9 0.2 0.11 12.9 0.2 2.1 2 0 0 2 2 2 0 PE family Glyco_hydro_28 PF00295.17 RKO92444.1 - 7.8e-54 182.9 14.2 1e-53 182.5 14.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 Beta_helix PF13229.6 RKO92444.1 - 8.5e-06 25.7 9.5 8.5e-06 25.7 9.5 3.2 2 1 1 3 3 3 1 Right handed beta helix region Pectate_lyase_3 PF12708.7 RKO92444.1 - 0.03 14.2 15.2 0.05 13.4 4.2 3.5 1 1 2 3 3 3 0 Pectate lyase superfamily protein RdRP PF05183.12 RKO92445.1 - 9.9e-68 229.2 0.0 2.5e-67 227.9 0.0 1.6 1 1 0 1 1 1 1 RNA dependent RNA polymerase NTP_transf_2 PF01909.23 RKO92446.1 - 1.6e-07 31.5 0.0 3e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 Nucleotidyltransferase domain PAP_assoc PF03828.19 RKO92446.1 - 6e-07 29.6 0.0 1.2e-06 28.6 0.0 1.6 1 0 0 1 1 1 1 Cid1 family poly A polymerase Polbeta PF18765.1 RKO92446.1 - 0.069 13.2 0.1 0.18 11.9 0.0 1.6 1 1 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase Importin_rep_4 PF18808.1 RKO92447.1 - 5.9e-33 113.0 1.6 2.4e-32 111.1 0.5 2.8 2 0 0 2 2 1 1 Importin repeat HEAT_EZ PF13513.6 RKO92447.1 - 1.5e-18 66.8 19.3 3.8e-08 33.6 0.0 11.1 11 1 1 12 12 12 2 HEAT-like repeat HEAT_2 PF13646.6 RKO92447.1 - 2.9e-12 46.8 19.6 4.6e-06 26.9 0.0 8.1 6 3 4 10 10 9 4 HEAT repeats Importin_rep_6 PF18829.1 RKO92447.1 - 5.9e-11 42.5 1.7 4.3e-09 36.5 0.1 4.0 4 1 1 5 5 4 1 Importin repeat 6 DUF3385 PF11865.8 RKO92447.1 - 1.8e-09 37.7 0.2 0.21 11.5 0.2 6.8 5 1 1 6 6 6 2 Domain of unknown function (DUF3385) Vac14_Fab1_bd PF12755.7 RKO92447.1 - 4.2e-09 36.9 0.0 0.0021 18.6 0.0 6.1 6 2 1 7 7 6 1 Vacuolar 14 Fab1-binding region HEAT PF02985.22 RKO92447.1 - 2.9e-08 33.3 20.7 0.00025 21.0 0.0 9.5 13 0 0 13 13 10 3 HEAT repeat RIX1 PF08167.12 RKO92447.1 - 2.2e-05 24.3 5.7 2.2 8.0 0.0 5.9 4 3 1 5 5 5 2 rRNA processing/ribosome biogenesis Cnd1 PF12717.7 RKO92447.1 - 3.5e-05 23.9 0.0 0.33 11.0 0.0 4.5 3 1 0 4 4 4 1 non-SMC mitotic condensation complex subunit 1 CLASP_N PF12348.8 RKO92447.1 - 0.00024 20.7 3.3 2.3 7.7 0.1 5.7 6 1 1 7 7 7 1 CLASP N terminal Adaptin_N PF01602.20 RKO92447.1 - 0.00043 19.0 2.0 0.37 9.3 0.1 3.1 1 1 1 3 3 3 3 Adaptin N terminal region RTP1_C1 PF10363.9 RKO92447.1 - 0.0085 16.3 0.7 26 5.1 0.1 4.5 3 2 0 4 4 4 0 Required for nuclear transport of RNA pol II C-terminus 1 MMS19_C PF12460.8 RKO92447.1 - 0.047 12.8 13.6 1.2 8.2 0.1 4.8 3 3 0 3 3 3 0 RNAPII transcription regulator C-terminal IBN_N PF03810.19 RKO92447.1 - 0.053 13.5 3.5 0.89 9.5 0.9 3.9 3 1 1 4 4 4 0 Importin-beta N-terminal domain Dopey_N PF04118.14 RKO92447.1 - 0.16 11.0 0.8 16 4.5 0.0 2.8 2 0 0 2 2 2 0 Dopey, N-terminal V-ATPase_H_N PF03224.14 RKO92447.1 - 0.26 10.6 2.7 15 4.8 0.0 3.5 2 1 1 3 3 3 0 V-ATPase subunit H ABC_trans_N PF14510.6 RKO92449.1 - 8.2e-13 48.8 0.0 1.3e-12 48.2 0.0 1.3 1 0 0 1 1 1 1 ABC-transporter N-terminal ABC_tran PF00005.27 RKO92449.1 - 1.1e-05 25.9 0.1 3.2e-05 24.5 0.1 1.7 2 0 0 2 2 2 1 ABC transporter DnaB_C PF03796.15 RKO92449.1 - 0.17 11.2 0.0 0.26 10.6 0.0 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain SQS_PSY PF00494.19 RKO92451.1 - 7.5e-57 192.8 3.8 9.7e-57 192.5 3.8 1.1 1 0 0 1 1 1 1 Squalene/phytoene synthase SQS_PSY PF00494.19 RKO92452.1 - 4.8e-58 196.7 6.7 1.6e-56 191.7 3.5 2.3 2 0 0 2 2 2 2 Squalene/phytoene synthase DAP3 PF10236.9 RKO92452.1 - 1.4e-34 119.7 0.2 1.5e-32 113.0 0.2 3.0 1 1 0 1 1 1 1 Mitochondrial ribosomal death-associated protein 3 AAA_16 PF13191.6 RKO92452.1 - 0.0085 16.5 0.5 0.033 14.6 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain Fungal_trans PF04082.18 RKO92454.1 - 2.3e-05 23.5 0.6 0.01 14.9 0.0 2.3 1 1 0 2 2 2 2 Fungal specific transcription factor domain GNAT_like PF18407.1 RKO92454.1 - 0.17 12.3 2.6 0.4 11.1 2.6 1.6 1 0 0 1 1 1 0 GCN5-related N-acetyltransferase like domain Pox_A_type_inc PF04508.12 RKO92454.1 - 0.32 10.9 3.1 0.71 9.8 3.1 1.6 1 0 0 1 1 1 0 Viral A-type inclusion protein repeat NRDE-2 PF08424.10 RKO92456.1 - 2.3e-44 151.8 0.0 1e-43 149.7 0.0 1.8 2 0 0 2 2 2 1 NRDE-2, necessary for RNA interference TPR_14 PF13428.6 RKO92456.1 - 2.9e-06 27.6 0.7 0.53 11.2 0.0 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO92456.1 - 6.6e-05 23.4 2.7 0.0037 17.7 0.1 3.1 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 RKO92456.1 - 0.0097 16.0 0.2 0.47 10.7 0.1 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat PPR PF01535.20 RKO92456.1 - 0.011 15.9 0.0 0.19 12.1 0.0 2.4 2 0 0 2 2 2 0 PPR repeat TPR_12 PF13424.6 RKO92456.1 - 0.018 15.3 0.7 2.6 8.4 0.1 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO92456.1 - 0.036 14.7 0.3 0.84 10.3 0.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 RKO92456.1 - 0.082 13.2 0.2 9.5 6.7 0.0 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 RKO92456.1 - 0.14 12.3 0.2 2.5 8.3 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat NRDE-2 PF08424.10 RKO92457.1 - 5.5e-12 45.5 0.1 7.7e-12 45.0 0.1 1.2 1 0 0 1 1 1 1 NRDE-2, necessary for RNA interference RNA_polI_A34 PF08208.11 RKO92457.1 - 0.072 13.2 10.1 0.12 12.5 10.1 1.3 1 0 0 1 1 1 0 DNA-directed RNA polymerase I subunit RPA34.5 A_deaminase PF00962.22 RKO92458.1 - 2.6e-124 414.8 0.1 3.6e-124 414.4 0.1 1.2 1 0 0 1 1 1 1 Adenosine/AMP deaminase ScsC_N PF18312.1 RKO92459.1 - 0.12 12.2 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Copper resistance protein ScsC N-terminal domain PUL PF08324.11 RKO92460.1 - 2.7e-51 174.4 1.4 4.1e-51 173.9 1.4 1.1 1 0 0 1 1 1 1 PUL domain PFU PF09070.11 RKO92460.1 - 1.2e-41 141.5 0.1 2.5e-41 140.5 0.1 1.6 1 0 0 1 1 1 1 PFU (PLAA family ubiquitin binding) WD40 PF00400.32 RKO92460.1 - 2.7e-30 103.9 20.0 2.9e-06 27.9 0.0 7.6 7 0 0 7 7 7 7 WD domain, G-beta repeat BBS2_Mid PF14783.6 RKO92460.1 - 0.00028 20.9 0.0 0.96 9.5 0.0 3.2 3 0 0 3 3 3 2 Ciliary BBSome complex subunit 2, middle region Bap31 PF05529.12 RKO92461.1 - 5.9e-14 52.1 0.1 1e-12 48.1 0.1 2.1 1 1 0 1 1 1 1 Bap31/Bap29 transmembrane region AA_permease PF00324.21 RKO92464.1 - 2e-116 389.4 38.6 2.4e-116 389.2 38.6 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 RKO92464.1 - 2.8e-45 154.9 43.0 3.4e-45 154.6 43.0 1.0 1 0 0 1 1 1 1 Amino acid permease Trp_Tyr_perm PF03222.13 RKO92464.1 - 0.0057 15.7 15.1 0.013 14.6 15.1 1.4 1 0 0 1 1 1 1 Tryptophan/tyrosine permease family PBP_N PF17093.5 RKO92464.1 - 5.9 7.2 5.3 3.8 7.8 2.1 2.3 2 0 0 2 2 2 0 Penicillin-binding protein N-terminus AA_permease PF00324.21 RKO92466.1 - 1.1e-127 426.5 46.0 1.3e-127 426.4 46.0 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 RKO92466.1 - 8.1e-42 143.5 49.7 8.7e-42 143.4 49.7 1.0 1 0 0 1 1 1 1 Amino acid permease ACT_7 PF13840.6 RKO92467.1 - 3.9e-21 74.6 0.0 5.5e-21 74.1 0.0 1.3 1 0 0 1 1 1 1 ACT domain SNF2_N PF00176.23 RKO92468.1 - 2.6e-57 194.1 0.0 7.9e-42 143.2 0.0 2.2 2 0 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.31 RKO92468.1 - 2.2e-20 73.1 0.0 5.9e-20 71.7 0.1 1.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO92468.1 - 4.7e-07 30.0 0.0 8.6e-07 29.1 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD_2 PF06733.15 RKO92468.1 - 0.14 11.7 0.0 0.26 10.9 0.0 1.3 1 0 0 1 1 1 0 DEAD_2 Abhydrolase_3 PF07859.13 RKO92470.1 - 0.046 13.6 0.0 0.088 12.7 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold 7TMR-DISM_7TM PF07695.11 RKO92471.1 - 0.002 18.1 10.4 0.002 18.1 10.4 1.5 1 1 0 1 1 1 1 7TM diverse intracellular signalling DNA_pol_A_exo1 PF01612.20 RKO92472.1 - 1.2e-07 31.6 0.0 3.6e-07 30.1 0.0 1.8 1 1 0 1 1 1 1 3'-5' exonuclease DUF1126 PF06565.12 RKO92473.1 - 9.1e-80 263.3 8.3 2e-36 124.0 0.3 3.1 3 0 0 3 3 3 3 DUF1126 PH-like domain Vps54 PF07928.12 RKO92475.1 - 1.8e-49 167.6 0.3 4.5e-49 166.3 0.3 1.7 1 0 0 1 1 1 1 Vps54-like protein Vps54_N PF10475.9 RKO92475.1 - 6.7e-09 35.4 0.0 1.3e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 Vacuolar-sorting protein 54, of GARP complex DUF2451 PF10474.9 RKO92475.1 - 1.8e-05 24.6 0.0 3.7e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function C-terminus (DUF2451) RINT1_TIP1 PF04437.13 RKO92475.1 - 0.00089 18.3 0.0 0.0017 17.4 0.0 1.3 1 0 0 1 1 1 1 RINT-1 / TIP-1 family Prominin PF05478.11 RKO92475.1 - 0.18 9.7 0.4 0.33 8.9 0.4 1.3 1 0 0 1 1 1 0 Prominin DUF3767 PF12597.8 RKO92476.1 - 1.4e-16 60.2 0.2 1.5e-16 60.0 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3767) Biliv-reduc_cat PF09166.10 RKO92476.1 - 0.012 16.0 0.0 0.013 15.8 0.0 1.1 1 0 0 1 1 1 0 Biliverdin reductase, catalytic CTC1 PF15489.6 RKO92477.1 - 9.6e-20 69.8 0.0 3.2e-10 38.3 0.0 3.1 3 0 0 3 3 3 3 CST, telomere maintenance, complex subunit CTC1 DUF4663 PF15668.5 RKO92477.1 - 0.046 12.8 2.7 0.083 11.9 2.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4663) F-box-like PF12937.7 RKO92479.1 - 0.18 11.7 5.2 0.17 11.8 0.4 2.8 2 0 0 2 2 2 0 F-box-like Acetyltransf_1 PF00583.25 RKO92480.1 - 1.4e-14 54.4 0.1 1.8e-14 54.0 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 RKO92480.1 - 1.9e-07 31.4 0.2 2.8e-07 30.9 0.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 RKO92480.1 - 2e-05 24.6 0.1 2.5e-05 24.2 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Pkinase PF00069.25 RKO92481.1 - 4.9e-50 170.3 0.0 5.6e-50 170.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO92481.1 - 2.3e-30 105.8 0.0 2.7e-30 105.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO92481.1 - 6.5e-05 22.4 0.0 0.00011 21.6 0.0 1.5 1 0 0 1 1 1 1 Kinase-like Choline_kinase PF01633.20 RKO92481.1 - 0.0015 18.2 0.0 0.0019 17.8 0.0 1.3 1 1 0 1 1 1 1 Choline/ethanolamine kinase Kdo PF06293.14 RKO92481.1 - 0.0016 17.9 0.0 0.0025 17.2 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 RKO92481.1 - 0.0047 16.9 0.0 0.02 14.8 0.0 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 RKO92481.1 - 0.05 12.6 0.1 0.064 12.2 0.1 1.2 1 0 0 1 1 1 0 Haspin like kinase domain FTA2 PF13095.6 RKO92481.1 - 0.13 11.9 0.0 7.7 6.1 0.0 2.1 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Pox_ser-thr_kin PF05445.11 RKO92481.1 - 0.17 10.8 0.0 0.28 10.1 0.0 1.3 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase cNMP_binding PF00027.29 RKO92482.1 - 4.1e-20 71.7 0.0 0.00027 21.0 0.0 4.3 4 0 0 4 4 4 4 Cyclic nucleotide-binding domain XdhC_C PF13478.6 RKO92482.1 - 0.087 13.3 0.1 0.2 12.2 0.1 1.6 1 0 0 1 1 1 0 XdhC Rossmann domain DUF2465 PF10239.9 RKO92482.1 - 0.088 12.0 0.1 0.2 10.9 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2465) OTU PF02338.19 RKO92483.1 - 1.7e-27 96.4 0.0 2.9e-27 95.7 0.0 1.3 1 0 0 1 1 1 1 OTU-like cysteine protease Peptidase_C65 PF10275.9 RKO92483.1 - 1.3e-05 24.8 0.0 1.9e-05 24.3 0.0 1.3 1 1 0 1 1 1 1 Peptidase C65 Otubain ANF_receptor PF01094.28 RKO92484.1 - 0.032 13.3 0.1 3.9 6.5 0.0 2.3 3 0 0 3 3 3 0 Receptor family ligand binding region PPR_2 PF13041.6 RKO92488.1 - 5.9e-52 173.7 0.0 2e-12 47.1 0.0 9.0 6 2 3 9 9 9 7 PPR repeat family PPR_1 PF12854.7 RKO92488.1 - 5e-47 157.3 0.0 6.2e-06 25.8 0.0 11.1 11 0 0 11 11 11 9 PPR repeat PPR PF01535.20 RKO92488.1 - 6.2e-38 126.4 0.0 0.00037 20.6 0.0 10.9 11 0 0 11 11 11 8 PPR repeat PPR_3 PF13812.6 RKO92488.1 - 5.3e-35 119.3 0.0 2.2e-08 34.1 0.0 7.1 5 1 2 7 7 7 6 Pentatricopeptide repeat domain PPR_long PF17177.4 RKO92488.1 - 5.9e-22 78.1 0.0 5e-06 26.0 0.0 4.8 2 1 3 5 5 5 4 Pentacotripeptide-repeat region of PRORP TPR_19 PF14559.6 RKO92488.1 - 0.00021 21.7 0.8 1.8 9.1 0.0 4.6 3 1 1 4 4 4 1 Tetratricopeptide repeat ATP13 PF12921.7 RKO92488.1 - 0.0016 18.3 0.0 0.76 9.6 0.0 3.8 3 1 1 4 4 4 1 Mitochondrial ATPase expression BKACE PF05853.12 RKO92488.1 - 0.0034 16.7 0.2 0.07 12.4 0.1 2.7 2 1 0 2 2 2 1 beta-keto acid cleavage enzyme TPR_14 PF13428.6 RKO92488.1 - 0.054 14.3 11.8 0.31 12.0 0.5 6.9 6 3 2 8 8 8 0 Tetratricopeptide repeat Sterol-sensing PF12349.8 RKO92491.1 - 1.3e-25 90.1 2.3 1.9e-25 89.5 2.3 1.3 1 0 0 1 1 1 1 Sterol-sensing domain of SREBP cleavage-activation Patched PF02460.18 RKO92491.1 - 4.3e-14 51.6 0.1 1.6e-11 43.1 6.2 1.8 2 0 0 2 2 2 1 Patched family PfkB PF00294.24 RKO92492.1 - 2.7e-40 138.6 1.4 4.8e-40 137.7 1.4 1.4 1 1 0 1 1 1 1 pfkB family carbohydrate kinase CLPTM1 PF05602.12 RKO92493.1 - 2.5e-134 448.5 1.1 3.2e-134 448.2 1.1 1.1 1 0 0 1 1 1 1 Cleft lip and palate transmembrane protein 1 (CLPTM1) PQ-loop PF04193.14 RKO92493.1 - 0.0019 17.9 1.1 0.32 10.8 0.1 2.6 2 0 0 2 2 2 2 PQ loop repeat DUF1097 PF06496.11 RKO92493.1 - 0.003 17.7 0.5 0.0059 16.7 0.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1097) MtN3_slv PF03083.16 RKO92493.1 - 0.04 14.0 0.8 0.04 14.0 0.8 3.1 3 1 1 4 4 4 0 Sugar efflux transporter for intercellular exchange Glycoprotein PF03409.15 RKO92494.1 - 0.15 10.9 1.0 0.22 10.3 1.0 1.2 1 0 0 1 1 1 0 Transmembrane glycoprotein Sec7_N PF12783.7 RKO92495.1 - 9.2e-30 103.6 2.1 9.2e-30 103.6 2.1 2.2 2 0 0 2 2 2 1 Guanine nucleotide exchange factor in Golgi transport N-terminal DCB PF16213.5 RKO92495.1 - 3.9e-23 82.0 2.6 3.7e-16 59.3 2.5 2.4 2 0 0 2 2 2 2 Dimerisation and cyclophilin-binding domain of Mon2 Pro_isomerase PF00160.21 RKO92499.1 - 7.5e-50 169.3 0.0 1e-49 168.9 0.0 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TPR_2 PF07719.17 RKO92499.1 - 1.5e-08 34.1 0.1 0.0056 16.7 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 RKO92499.1 - 1.4e-06 27.8 0.2 0.0061 16.3 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 RKO92499.1 - 4e-05 23.2 1.2 0.03 14.0 0.3 2.6 2 1 0 2 2 2 2 TPR repeat TPR_14 PF13428.6 RKO92499.1 - 0.00056 20.5 0.7 0.042 14.7 0.5 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO92499.1 - 0.0016 19.0 0.1 9.4 7.1 0.1 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat DUF5113 PF17140.4 RKO92499.1 - 0.027 14.3 0.0 0.057 13.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5113) DUF3856 PF12968.7 RKO92499.1 - 0.055 13.5 0.1 2.9 8.0 0.1 2.6 2 1 1 3 3 3 0 Domain of Unknown Function (DUF3856) TPR_16 PF13432.6 RKO92499.1 - 0.07 13.8 2.9 1.5 9.5 0.8 2.6 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 RKO92499.1 - 0.14 12.4 0.1 0.88 9.9 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 RKO92499.1 - 0.17 12.0 0.7 0.72 10.0 0.4 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat 4HBT_3 PF13622.6 RKO92500.1 - 3.5e-07 30.7 0.2 0.00085 19.6 0.0 2.4 1 1 1 2 2 2 2 Thioesterase-like superfamily CDH-cyt PF16010.5 RKO92500.1 - 0.0037 17.0 0.1 0.0062 16.2 0.1 1.3 1 0 0 1 1 1 1 Cytochrome domain of cellobiose dehydrogenase Cytochrom_B561 PF03188.16 RKO92500.1 - 0.25 11.5 9.3 0.26 11.4 7.8 1.8 1 1 0 1 1 1 0 Eukaryotic cytochrome b561 DUF2427 PF10348.9 RKO92500.1 - 6.2 6.7 7.8 73 3.2 7.1 2.6 1 1 0 1 1 1 0 Domain of unknown function (DUF2427) ATP-synt_ab PF00006.25 RKO92501.1 - 2.1e-72 243.2 0.0 3.2e-72 242.6 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 RKO92501.1 - 2.7e-47 160.2 0.1 4.7e-47 159.5 0.1 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.23 RKO92501.1 - 1.4e-19 70.3 1.3 4.2e-19 68.8 1.3 1.9 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain Radical_SAM_C PF16199.5 RKO92501.1 - 0.08 13.0 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 Radical_SAM C-terminal domain Pro_isomerase PF00160.21 RKO92503.1 - 8.3e-49 165.9 0.2 1.8e-48 164.8 0.1 1.6 2 0 0 2 2 2 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WD40 PF00400.32 RKO92503.1 - 6.7e-08 33.1 0.5 0.04 14.8 0.0 4.5 4 0 0 4 4 4 3 WD domain, G-beta repeat LRR_4 PF12799.7 RKO92505.1 - 0.0014 19.0 1.7 0.0031 17.9 1.7 1.6 1 0 0 1 1 1 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO92505.1 - 0.0025 17.6 0.6 0.0041 16.8 0.6 1.5 1 0 0 1 1 1 1 Leucine rich repeat NICE-1 PF15845.5 RKO92505.1 - 0.02 15.6 0.3 0.02 15.6 0.3 1.8 2 0 0 2 2 2 0 Cysteine-rich C-terminal 1 family LRR_1 PF00560.33 RKO92505.1 - 0.2 12.3 2.4 0.86 10.4 0.3 2.6 2 1 0 2 2 2 0 Leucine Rich Repeat Cgr1 PF03879.14 RKO92506.1 - 0.066 13.6 0.5 0.12 12.8 0.2 1.5 1 1 1 2 2 2 0 Cgr1 family Ribonuclease_3 PF00636.26 RKO92507.1 - 4.1e-14 53.1 0.0 1.1e-13 51.7 0.0 1.7 1 0 0 1 1 1 1 Ribonuclease III domain Ribonucleas_3_3 PF14622.6 RKO92507.1 - 1.5e-13 51.0 0.0 3.6e-13 49.8 0.0 1.5 1 0 0 1 1 1 1 Ribonuclease-III-like GON PF08685.11 RKO92509.1 - 5.9e-08 32.8 1.1 3.1e-07 30.5 0.0 2.5 2 1 0 2 2 2 1 GON domain PDEase_I PF00233.19 RKO92515.1 - 2.1e-69 233.9 0.0 2.4e-69 233.7 0.0 1.0 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase Gln_deamidase_2 PF18626.1 RKO92516.1 - 0.012 15.9 0.0 0.028 14.7 0.0 1.6 1 0 0 1 1 1 0 Glutaminase TMPIT PF07851.13 RKO92517.1 - 0.15 11.3 0.1 0.17 11.1 0.1 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF4298 PF14131.6 RKO92518.1 - 0.63 10.0 4.2 2.3 8.2 0.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) DUF2203 PF09969.9 RKO92518.1 - 0.85 10.4 4.0 1.6 9.4 4.0 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) PEX11 PF05648.14 RKO92519.1 - 1.7e-16 60.4 0.9 2.3e-16 59.9 0.9 1.1 1 0 0 1 1 1 1 Peroxisomal biogenesis factor 11 (PEX11) RNA_pol_I_A49 PF06870.12 RKO92519.1 - 0.15 10.9 0.0 0.22 10.4 0.0 1.2 1 0 0 1 1 1 0 A49-like RNA polymerase I associated factor DEAD PF00270.29 RKO92520.1 - 1.7e-49 167.9 0.1 2.4e-48 164.2 0.0 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO92520.1 - 7e-32 110.1 0.0 1.3e-30 106.0 0.0 2.7 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO92520.1 - 8.9e-06 25.8 0.0 2.6e-05 24.3 0.0 1.8 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 RKO92520.1 - 0.00071 19.9 0.1 0.54 10.6 0.0 2.6 2 1 0 2 2 2 2 AAA domain T4SS-DNA_transf PF02534.14 RKO92520.1 - 0.059 12.2 0.0 0.13 11.0 0.0 1.5 2 0 0 2 2 2 0 Type IV secretory system Conjugative DNA transfer F-box-like PF12937.7 RKO92521.1 - 0.012 15.5 0.0 0.026 14.4 0.0 1.6 1 0 0 1 1 1 0 F-box-like Transglut_core PF01841.19 RKO92522.1 - 7.5e-15 55.4 0.8 1.9e-14 54.1 0.8 1.7 1 0 0 1 1 1 1 Transglutaminase-like superfamily Rad4 PF03835.15 RKO92522.1 - 1.2e-10 41.2 0.1 2e-10 40.5 0.1 1.3 1 0 0 1 1 1 1 Rad4 transglutaminase-like domain DUF2087 PF09860.9 RKO92522.1 - 0.056 13.6 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2087) FAM176 PF14851.6 RKO92523.1 - 4.6 6.9 6.8 0.44 10.2 1.9 1.9 2 0 0 2 2 2 0 FAM176 family Cwf_Cwc_15 PF04889.12 RKO92523.1 - 5 6.8 15.8 11 5.6 15.8 1.7 1 1 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein DDE_Tnp_4 PF13359.6 RKO92524.1 - 0.014 15.1 0.0 0.028 14.1 0.0 1.7 1 1 0 1 1 1 0 DDE superfamily endonuclease NolB PF17398.2 RKO92526.1 - 7.4e-05 23.2 9.0 0.82 10.1 0.4 3.6 1 1 3 4 4 4 3 Nodulation protein NolB Dicer_dimer PF03368.14 RKO92526.1 - 0.001 19.2 3.4 5.2 7.3 0.2 3.5 1 1 3 4 4 4 3 Dicer dimerisation domain Fzo_mitofusin PF04799.13 RKO92529.1 - 0.47 10.0 2.1 8.6 5.9 0.4 2.3 2 0 0 2 2 2 0 fzo-like conserved region HOOK PF05622.12 RKO92529.1 - 0.75 7.9 2.3 2 6.4 0.1 2.3 3 0 0 3 3 3 0 HOOK protein DUF3613 PF12266.8 RKO92529.1 - 1.8 8.4 5.0 0.32 10.8 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3613) DUF5310 PF17237.2 RKO92531.1 - 0.18 11.7 0.1 0.33 10.9 0.1 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5310) PPR_2 PF13041.6 RKO92532.1 - 1.5e-27 95.5 0.0 4.6e-08 33.1 0.2 8.1 6 2 2 8 8 8 5 PPR repeat family PPR PF01535.20 RKO92532.1 - 1.5e-20 71.9 7.5 0.00039 20.5 0.1 8.7 9 0 0 9 9 9 3 PPR repeat PPR_3 PF13812.6 RKO92532.1 - 6.4e-20 71.0 0.1 1.4e-06 28.3 0.0 6.7 4 2 5 9 9 9 6 Pentatricopeptide repeat domain PPR_long PF17177.4 RKO92532.1 - 1.8e-17 63.4 0.1 3.3e-06 26.6 0.0 4.4 1 1 2 4 4 4 3 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 RKO92532.1 - 7.3e-15 54.4 1.1 0.00037 20.1 0.0 5.3 5 0 0 5 5 5 3 PPR repeat DSPc PF00782.20 RKO92533.1 - 6.8e-06 25.9 0.0 1.4e-05 25.0 0.0 1.7 1 1 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 RKO92533.1 - 0.00017 21.3 0.0 0.00026 20.7 0.0 1.4 1 1 0 1 1 1 1 Protein-tyrosine phosphatase CDKN3 PF05706.12 RKO92533.1 - 0.035 13.8 0.0 0.15 11.7 0.0 2.0 1 1 0 1 1 1 0 Cyclin-dependent kinase inhibitor 3 (CDKN3) Leu_leader PF08054.11 RKO92534.1 - 0.11 12.1 0.0 0.21 11.2 0.0 1.4 1 0 0 1 1 1 0 Leucine operon leader peptide WD40 PF00400.32 RKO92536.1 - 4.8e-06 27.2 0.5 0.07 14.0 0.0 3.4 3 0 0 3 3 3 2 WD domain, G-beta repeat Coatomer_WDAD PF04053.14 RKO92536.1 - 0.05 12.7 0.0 0.056 12.5 0.0 1.1 1 0 0 1 1 1 0 Coatomer WD associated region WD40 PF00400.32 RKO92537.1 - 1.5e-12 47.8 2.4 0.0047 17.7 0.1 6.6 6 0 0 6 6 6 3 WD domain, G-beta repeat zf-Mss51 PF13824.6 RKO92539.1 - 0.046 13.8 0.1 0.46 10.6 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 TcpQ PF10671.9 RKO92539.1 - 0.081 13.1 2.1 0.3 11.2 0.1 2.3 2 0 0 2 2 2 0 Toxin co-regulated pilus biosynthesis protein Q DBR1 PF05011.13 RKO92541.1 - 2.1e-19 70.4 0.1 3e-19 69.8 0.1 1.3 1 0 0 1 1 1 1 Lariat debranching enzyme, C-terminal domain Metallophos PF00149.28 RKO92541.1 - 1.1e-10 42.4 1.1 1.5e-10 41.9 1.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 RKO92541.1 - 0.00068 19.9 0.0 0.00097 19.4 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF3336 PF11815.8 RKO92542.1 - 1.3e-39 135.1 0.4 2.4e-39 134.2 0.4 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3336) Patatin PF01734.22 RKO92542.1 - 9.3e-19 68.4 0.0 2.2e-18 67.2 0.0 1.6 1 0 0 1 1 1 1 Patatin-like phospholipase TRAP_alpha PF03896.16 RKO92543.1 - 2.1e-21 76.4 0.1 2.5e-21 76.1 0.1 1.0 1 0 0 1 1 1 1 Translocon-associated protein (TRAP), alpha subunit Ribosomal_L6 PF00347.23 RKO92544.1 - 2.1e-23 82.8 0.3 2.7e-10 40.8 0.1 2.7 2 1 0 2 2 2 2 Ribosomal protein L6 PTS_2-RNA PF01885.16 RKO92545.1 - 2.3e-62 210.3 0.2 2.6e-62 210.1 0.2 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family SpoU_methylase PF00588.19 RKO92545.1 - 0.042 14.0 0.1 0.54 10.4 0.1 2.2 1 1 0 1 1 1 0 SpoU rRNA Methylase family E1-E2_ATPase PF00122.20 RKO92546.1 - 1.9e-51 174.2 5.9 2.9e-50 170.3 1.9 2.8 3 0 0 3 3 3 2 E1-E2 ATPase Cation_ATPase_C PF00689.21 RKO92546.1 - 4.1e-49 166.7 7.0 4.1e-49 166.7 7.0 2.6 3 0 0 3 3 3 2 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 RKO92546.1 - 1.7e-23 84.0 0.1 1.4e-22 81.0 0.1 2.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 RKO92546.1 - 7.5e-23 80.0 0.0 7.5e-23 80.0 0.0 2.0 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 RKO92546.1 - 3.4e-21 75.1 0.0 7.4e-21 74.0 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 RKO92546.1 - 1.7e-07 31.2 2.1 4.6e-05 23.3 1.0 2.7 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 RKO92546.1 - 1.8e-07 31.8 0.0 4.8e-07 30.4 0.0 1.8 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase IstB_IS21 PF01695.17 RKO92546.1 - 0.091 12.5 0.1 0.44 10.3 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein Macro PF01661.21 RKO92547.1 - 0.14 12.2 0.0 0.52 10.4 0.0 1.8 2 0 0 2 2 2 0 Macro domain zf-CCCH_2 PF14608.6 RKO92548.1 - 9.6e-13 48.1 52.9 4.8e-05 23.7 7.2 6.4 6 0 0 6 6 6 6 RNA-binding, Nab2-type zinc finger PWI PF01480.17 RKO92548.1 - 0.088 13.1 0.2 0.14 12.5 0.2 1.2 1 0 0 1 1 1 0 PWI domain CUB PF00431.20 RKO92549.1 - 1.3e-07 31.9 0.0 1.9e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 CUB domain EGF_Tenascin PF18720.1 RKO92549.1 - 3.4e-05 23.8 7.9 7.1e-05 22.7 7.9 1.6 1 0 0 1 1 1 1 Tenascin EGF domain EGF_2 PF07974.13 RKO92549.1 - 0.0024 18.2 11.3 0.0061 16.9 11.3 1.7 1 0 0 1 1 1 1 EGF-like domain I-EGF_1 PF18372.1 RKO92549.1 - 0.85 9.8 7.8 2.2 8.4 7.8 1.8 1 0 0 1 1 1 0 Integrin beta epidermal growth factor like domain 1 Polysacc_deac_1 PF01522.21 RKO92551.1 - 3.4e-15 56.0 0.0 6e-15 55.2 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase START PF01852.19 RKO92554.1 - 1.4e-11 44.2 0.0 2e-11 43.7 0.0 1.1 1 0 0 1 1 1 1 START domain TMEM108 PF15759.5 RKO92554.1 - 0.58 9.1 6.0 0.93 8.4 6.0 1.2 1 0 0 1 1 1 0 TMEM108 family Amidohydro_3 PF07969.11 RKO92557.1 - 1.1e-15 58.0 0.2 2e-12 47.4 0.1 2.1 2 0 0 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 RKO92557.1 - 0.2 10.9 0.1 0.27 10.5 0.1 1.2 1 0 0 1 1 1 0 Amidohydrolase family Vps16_C PF04840.12 RKO92558.1 - 0.028 13.5 0.2 0.053 12.5 0.2 1.5 2 0 0 2 2 2 0 Vps16, C-terminal region EcoRII-C PF09019.11 RKO92558.1 - 0.069 13.2 0.4 0.11 12.6 0.4 1.3 1 1 0 1 1 1 0 EcoRII C terminal Mito_carr PF00153.27 RKO92564.1 - 1.3e-57 191.7 0.8 4.3e-23 81.1 0.0 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein DUF2717 PF10911.8 RKO92564.1 - 0.12 12.1 0.1 23 4.8 0.0 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2717) Polysacc_deac_1 PF01522.21 RKO92565.1 - 1.2e-18 67.2 0.0 2e-18 66.5 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase PCI PF01399.27 RKO92566.1 - 2.6e-10 40.7 0.0 6.2e-10 39.5 0.0 1.7 1 0 0 1 1 1 1 PCI domain Pox_L5 PF04872.13 RKO92566.1 - 0.017 15.0 0.0 0.036 14.0 0.0 1.5 1 0 0 1 1 1 0 Poxvirus L5 protein family Fzo_mitofusin PF04799.13 RKO92568.1 - 5.3 6.6 11.4 0.028 14.0 2.0 2.0 2 1 1 3 3 3 0 fzo-like conserved region GON PF08685.11 RKO92569.1 - 1.2e-11 44.9 0.0 7.9e-07 29.1 0.0 2.3 1 1 1 2 2 2 2 GON domain GON PF08685.11 RKO92570.1 - 1.2e-11 44.8 0.0 1.3e-05 25.2 0.0 2.2 1 1 1 2 2 2 2 GON domain Synaptobrevin PF00957.21 RKO92571.1 - 0.052 13.4 0.0 0.072 12.9 0.0 1.2 1 0 0 1 1 1 0 Synaptobrevin START PF01852.19 RKO92573.1 - 1.2e-13 51.0 0.0 1.5e-13 50.6 0.0 1.2 1 0 0 1 1 1 1 START domain mit_SMPDase PF14724.6 RKO92575.1 - 1.6e-10 39.7 1.0 1.6e-10 39.7 1.0 2.7 4 0 0 4 4 4 1 Mitochondrial-associated sphingomyelin phosphodiesterase PXA PF02194.15 RKO92577.1 - 1.3e-48 165.3 0.0 2.1e-48 164.7 0.0 1.3 1 0 0 1 1 1 1 PXA domain Nexin_C PF08628.12 RKO92577.1 - 1e-14 55.0 0.0 2.2e-14 54.0 0.0 1.6 1 0 0 1 1 1 1 Sorting nexin C terminal B2 PF11473.8 RKO92577.1 - 0.084 12.7 0.3 0.88 9.4 0.0 2.7 3 0 0 3 3 3 0 RNA binding protein B2 PPP4R2 PF09184.11 RKO92577.1 - 0.19 11.3 3.8 0.37 10.3 3.8 1.5 1 0 0 1 1 1 0 PPP4R2 Nop14 PF04147.12 RKO92577.1 - 0.34 9.1 4.8 0.48 8.6 4.8 1.1 1 0 0 1 1 1 0 Nop14-like family SDA1 PF05285.12 RKO92577.1 - 1.9 7.8 5.5 3.1 7.1 5.5 1.3 1 0 0 1 1 1 0 SDA1 CENP-B_dimeris PF09026.10 RKO92577.1 - 2 8.9 17.7 5.9 7.3 17.7 1.8 1 0 0 1 1 1 0 Centromere protein B dimerisation domain NOA36 PF06524.12 RKO92577.1 - 2.5 7.4 11.8 4 6.7 11.8 1.2 1 0 0 1 1 1 0 NOA36 protein Cwf_Cwc_15 PF04889.12 RKO92577.1 - 3.1 7.4 13.7 6.1 6.5 13.7 1.4 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein DNA_pol_phi PF04931.13 RKO92577.1 - 6.7 4.7 14.1 12 3.8 14.1 1.3 1 0 0 1 1 1 0 DNA polymerase phi DUF1929 PF09118.11 RKO92578.1 - 2e-22 79.3 0.8 3.7e-22 78.4 0.8 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1929) Glyoxal_oxid_N PF07250.11 RKO92578.1 - 1.7e-17 63.5 0.1 5.6e-09 35.6 0.0 2.3 2 0 0 2 2 2 2 Glyoxal oxidase N-terminus Kelch_4 PF13418.6 RKO92578.1 - 0.0016 18.4 0.0 0.0071 16.3 0.0 2.2 1 0 0 1 1 1 1 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO92578.1 - 0.07 13.5 0.0 3.8 7.9 0.0 3.2 3 0 0 3 3 3 0 Kelch motif zf-C2H2_2 PF12756.7 RKO92579.1 - 4.8e-28 97.5 10.1 4.1e-20 72.0 0.0 3.4 2 1 1 3 3 3 3 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 RKO92579.1 - 1.9e-12 47.1 12.4 3.1e-07 30.5 3.6 3.6 3 0 0 3 3 3 3 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 RKO92579.1 - 8.7e-09 35.5 10.6 3.6e-07 30.4 1.8 3.9 4 0 0 4 4 4 1 Zinc-finger of C2H2 type zf-C2H2_4 PF13894.6 RKO92579.1 - 1.5e-05 25.4 7.5 0.22 12.4 0.1 4.4 5 0 0 5 5 5 3 C2H2-type zinc finger zf-LYAR PF08790.11 RKO92579.1 - 0.00014 21.6 8.8 0.038 13.9 1.4 3.6 3 0 0 3 3 3 2 LYAR-type C2HC zinc finger zf-C2H2 PF00096.26 RKO92579.1 - 0.0066 16.9 14.3 1 10.0 0.4 4.5 5 0 0 5 5 5 3 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 RKO92579.1 - 0.079 13.0 9.6 2.1 8.4 0.6 3.7 3 0 0 3 3 3 0 C2H2-type zinc finger HNH_5 PF14279.6 RKO92579.1 - 0.13 12.1 5.8 4.7 7.2 0.3 3.3 3 0 0 3 3 3 0 HNH endonuclease DUF2256 PF10013.9 RKO92579.1 - 0.42 10.8 3.8 33 4.7 0.0 3.3 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2256) Dynamin_M PF01031.20 RKO92580.1 - 6.6e-25 87.9 0.0 1.3e-24 86.9 0.0 1.5 1 1 0 1 1 1 1 Dynamin central region Dynamin_N PF00350.23 RKO92580.1 - 6.5e-12 45.8 0.0 1.1e-11 45.1 0.0 1.4 1 0 0 1 1 1 1 Dynamin family MMR_HSR1 PF01926.23 RKO92580.1 - 0.013 15.6 0.0 0.05 13.7 0.0 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase Nod1 PF17114.5 RKO92580.1 - 0.014 15.5 0.0 0.034 14.3 0.0 1.6 1 0 0 1 1 1 0 Gef2-related medial cortical node protein Nod1 GED PF02212.18 RKO92580.1 - 0.02 15.0 0.0 0.091 12.9 0.0 2.1 2 0 0 2 2 2 0 Dynamin GTPase effector domain AAA_16 PF13191.6 RKO92580.1 - 0.12 12.8 0.0 0.55 10.6 0.0 2.2 2 0 0 2 2 2 0 AAA ATPase domain FeoB_N PF02421.18 RKO92580.1 - 0.14 11.7 0.0 0.32 10.5 0.0 1.6 1 0 0 1 1 1 0 Ferrous iron transport protein B Dynamin_N PF00350.23 RKO92581.1 - 2.9e-17 63.2 0.0 4.9e-17 62.5 0.0 1.4 1 0 0 1 1 1 1 Dynamin family GED PF02212.18 RKO92581.1 - 3.5e-05 23.9 0.0 6.5e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 Dynamin GTPase effector domain Dynamin_M PF01031.20 RKO92581.1 - 5.2e-05 22.6 0.0 0.0001 21.6 0.0 1.4 1 0 0 1 1 1 1 Dynamin central region MMR_HSR1 PF01926.23 RKO92581.1 - 0.059 13.5 0.1 0.39 10.8 0.1 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase PduV-EutP PF10662.9 RKO92581.1 - 0.16 11.7 0.0 2.1 8.1 0.0 2.3 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Katanin_con80 PF13925.6 RKO92583.1 - 2.6e-39 134.8 0.1 3.7e-39 134.3 0.1 1.2 1 0 0 1 1 1 1 con80 domain of Katanin WD40 PF00400.32 RKO92583.1 - 1e-28 98.9 5.2 1.2e-08 35.4 0.2 6.0 6 0 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO92583.1 - 4.8e-09 36.4 0.0 0.0056 17.0 0.0 4.3 1 1 3 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO92583.1 - 0.083 11.5 0.0 9.3 4.8 0.0 3.0 2 2 1 3 3 3 0 Nucleoporin Nup120/160 MFS_1 PF07690.16 RKO92584.1 - 3.8e-46 157.6 62.3 5.9e-44 150.4 52.2 3.3 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO92584.1 - 4.4e-10 39.0 13.3 4.4e-10 39.0 13.3 3.1 3 0 0 3 3 3 2 Sugar (and other) transporter PepSY_TM_like_2 PF16357.5 RKO92584.1 - 0.033 14.2 0.1 0.1 12.6 0.1 1.8 1 0 0 1 1 1 0 Putative PepSY_TM-like AMP-binding PF00501.28 RKO92586.1 - 9.7e-91 304.5 0.2 1.2e-90 304.2 0.2 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 RKO92586.1 - 5.9e-24 84.9 0.0 4.3e-23 82.1 0.0 2.4 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 RKO92586.1 - 5.7e-19 67.8 0.1 1.4e-18 66.6 0.1 1.7 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus Acyl_transf_3 PF01757.22 RKO92587.1 - 6.1e-20 71.6 30.1 1e-19 70.9 30.1 1.4 1 0 0 1 1 1 1 Acyltransferase family ABC_tran PF00005.27 RKO92589.1 - 1.4e-55 187.6 0.1 5.6e-34 117.6 0.0 2.6 2 1 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 RKO92589.1 - 2.2e-46 158.8 26.7 2.1e-35 122.7 14.6 2.2 2 0 0 2 2 2 2 ABC transporter transmembrane region SMC_N PF02463.19 RKO92589.1 - 6.2e-12 45.4 3.3 0.01 15.3 0.0 4.3 3 1 1 4 4 4 4 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 RKO92589.1 - 1.6e-09 38.0 0.7 0.0099 15.7 0.0 3.5 3 0 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 RKO92589.1 - 5e-08 32.6 3.4 0.00044 19.9 0.1 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 RKO92589.1 - 5e-08 33.0 0.1 0.0077 16.3 0.0 2.6 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_23 PF13476.6 RKO92589.1 - 2.9e-07 31.2 0.4 0.0087 16.6 0.1 2.4 2 0 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 RKO92589.1 - 1.6e-06 28.1 0.1 0.015 15.2 0.2 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_15 PF13175.6 RKO92589.1 - 0.00084 19.2 0.1 0.23 11.1 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 RKO92589.1 - 0.0016 18.7 3.3 0.24 11.7 0.1 3.1 2 1 0 2 2 2 1 AAA domain Dynamin_N PF00350.23 RKO92589.1 - 0.0043 17.1 0.4 0.83 9.7 0.0 2.4 2 0 0 2 2 2 1 Dynamin family AAA_7 PF12775.7 RKO92589.1 - 0.0046 16.5 0.3 3.3 7.2 0.0 2.3 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_30 PF13604.6 RKO92589.1 - 0.0049 16.6 1.5 2.2 8.0 0.5 2.6 2 0 0 2 2 2 2 AAA domain T2SSE PF00437.20 RKO92589.1 - 0.0057 15.7 0.0 0.014 14.5 0.0 1.6 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_16 PF13191.6 RKO92589.1 - 0.0093 16.4 4.9 0.046 14.1 0.0 3.2 3 2 0 3 3 2 1 AAA ATPase domain ABC_ATPase PF09818.9 RKO92589.1 - 0.014 14.3 1.6 1.1 7.9 0.8 2.4 2 0 0 2 2 2 0 Predicted ATPase of the ABC class MeaB PF03308.16 RKO92589.1 - 0.016 14.2 0.6 0.31 10.0 0.0 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 RKO92589.1 - 0.018 14.3 0.7 2.9 7.1 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin DUF87 PF01935.17 RKO92589.1 - 0.021 14.9 0.2 0.021 14.9 0.2 2.4 2 0 0 2 2 2 0 Helicase HerA, central domain Ploopntkinase3 PF18751.1 RKO92589.1 - 0.026 14.4 0.1 3.7 7.4 0.1 2.4 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 FtsK_SpoIIIE PF01580.18 RKO92589.1 - 0.043 13.2 0.3 0.71 9.2 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_25 PF13481.6 RKO92589.1 - 0.054 13.1 3.3 3.8 7.0 0.0 2.8 3 0 0 3 3 3 0 AAA domain ATP-synt_ab PF00006.25 RKO92589.1 - 0.11 12.1 0.0 7.5 6.2 0.0 2.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain FeoB_N PF02421.18 RKO92589.1 - 0.13 11.8 0.2 0.95 9.0 0.1 2.3 2 0 0 2 2 2 0 Ferrous iron transport protein B TrwB_AAD_bind PF10412.9 RKO92589.1 - 0.16 10.9 2.7 1.4 7.8 0.1 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain SbcCD_C PF13558.6 RKO92589.1 - 0.16 12.2 0.1 4.5 7.6 0.0 3.1 3 1 0 3 3 2 0 Putative exonuclease SbcCD, C subunit AAA_18 PF13238.6 RKO92589.1 - 0.23 12.0 0.6 21 5.6 0.1 2.4 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 RKO92589.1 - 0.31 10.6 4.4 3.6 7.2 0.0 2.7 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain AAA_28 PF13521.6 RKO92589.1 - 0.42 10.8 1.3 26 5.0 0.4 2.5 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 RKO92589.1 - 0.92 8.6 2.4 1.4 8.0 0.0 2.1 2 0 0 2 2 2 0 NB-ARC domain zf-H2C2_2 PF13465.6 RKO92591.1 - 8.9e-14 51.2 3.7 1.6e-07 31.4 0.1 3.2 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 RKO92591.1 - 6e-10 39.1 13.3 0.00051 20.7 1.6 3.3 3 0 0 3 3 3 2 C2H2-type zinc finger zf-C2H2 PF00096.26 RKO92591.1 - 1.6e-08 34.6 15.5 0.00046 20.5 0.1 3.3 3 0 0 3 3 3 2 Zinc finger, C2H2 type zinc_ribbon_9 PF14369.6 RKO92591.1 - 7.3e-05 22.9 1.6 0.28 11.5 0.2 2.2 2 0 0 2 2 2 2 zinc-ribbon zf-Di19 PF05605.12 RKO92591.1 - 0.0025 18.1 0.3 0.057 13.7 0.1 2.1 2 0 0 2 2 2 1 Drought induced 19 protein (Di19), zinc-binding zf-TFIIB PF13453.6 RKO92591.1 - 0.02 14.2 0.4 0.032 13.6 0.4 1.4 1 0 0 1 1 1 0 Transcription factor zinc-finger LIM PF00412.22 RKO92591.1 - 0.059 13.6 1.0 3.7 7.8 1.3 2.2 1 1 1 2 2 2 0 LIM domain zf_UBZ PF18439.1 RKO92591.1 - 0.062 12.9 4.1 1.2 8.8 0.1 2.6 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-C2H2_jaz PF12171.8 RKO92591.1 - 0.073 13.4 2.6 7.6 7.0 0.0 3.3 4 0 0 4 4 4 0 Zinc-finger double-stranded RNA-binding zf-C2HE PF16278.5 RKO92591.1 - 0.082 13.4 2.2 3.7 8.1 0.2 2.3 1 1 1 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2_6 PF13912.6 RKO92591.1 - 0.11 12.5 0.1 0.11 12.5 0.1 3.0 3 1 0 3 3 3 0 C2H2-type zinc finger zf-met PF12874.7 RKO92591.1 - 0.12 12.8 2.1 24 5.5 0.0 3.1 3 0 0 3 3 3 0 Zinc-finger of C2H2 type zf-AN1 PF01428.16 RKO92591.1 - 0.16 12.2 7.7 1.9 8.7 1.9 2.4 1 1 1 2 2 2 0 AN1-like Zinc finger Zn_Tnp_IS1595 PF12760.7 RKO92591.1 - 0.18 11.8 8.5 0.16 11.9 4.8 2.2 1 1 0 2 2 2 0 Transposase zinc-ribbon domain FYDLN_acid PF09538.10 RKO92591.1 - 0.19 12.5 0.2 4.5 8.0 0.2 2.0 1 1 0 1 1 1 0 Protein of unknown function (FYDLN_acid) Zn-ribbon_8 PF09723.10 RKO92591.1 - 0.23 11.6 2.6 13 6.0 0.3 2.4 1 1 2 3 3 3 0 Zinc ribbon domain zf-H2C2_5 PF13909.6 RKO92591.1 - 0.42 10.4 5.1 1.6 8.5 1.6 2.8 2 0 0 2 2 2 0 C2H2-type zinc-finger domain zf-C2H2_11 PF16622.5 RKO92591.1 - 0.51 10.1 5.4 2.8 7.8 0.2 2.5 2 0 0 2 2 2 0 zinc-finger C2H2-type Flavin_Reduct PF01613.18 RKO92592.1 - 2.3e-05 24.5 0.0 0.0001 22.4 0.0 2.0 1 1 0 1 1 1 1 Flavin reductase like domain Microtub_bd PF16796.5 RKO92596.1 - 3.1e-06 27.2 1.9 0.0094 15.9 0.1 3.6 3 0 0 3 3 3 2 Microtubule binding Kinesin PF00225.23 RKO92596.1 - 1.5e-05 24.1 3.3 1.6e-05 24.0 0.0 2.4 2 0 0 2 2 2 1 Kinesin motor domain Spc7 PF08317.11 RKO92596.1 - 0.51 9.2 40.7 0.037 12.9 19.6 3.1 2 1 1 3 3 3 0 Spc7 kinetochore protein FtsH_ext PF06480.15 RKO92597.1 - 0.019 15.3 0.3 7.9 6.9 0.1 2.4 2 0 0 2 2 2 0 FtsH Extracellular Peptidase_S8 PF00082.22 RKO92598.1 - 3.2e-36 125.1 0.0 8.6e-36 123.7 0.0 1.7 1 1 0 1 1 1 1 Subtilase family fn3_5 PF06280.12 RKO92598.1 - 3.6e-13 50.2 0.1 8.8e-13 49.0 0.1 1.7 1 0 0 1 1 1 1 Fn3-like domain PA PF02225.22 RKO92598.1 - 2.3e-05 24.3 0.4 9.2e-05 22.4 0.4 2.1 1 0 0 1 1 1 1 PA domain DUF916 PF06030.12 RKO92598.1 - 0.088 12.9 0.0 0.23 11.6 0.0 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF916) EF-hand_5 PF13202.6 RKO92599.1 - 0.039 13.5 0.1 0.078 12.5 0.1 1.5 1 0 0 1 1 1 0 EF hand TMP_2 PF06791.13 RKO92599.1 - 3.6 7.2 10.7 7 6.3 10.7 1.4 1 0 0 1 1 1 0 Prophage tail length tape measure protein DUF979 PF06166.12 RKO92600.1 - 0.0065 15.7 3.5 0.0065 15.7 3.5 1.9 1 1 1 2 2 2 1 Protein of unknown function (DUF979) SP_C-Propep PF08999.10 RKO92600.1 - 0.056 13.2 0.5 0.74 9.6 0.0 2.3 1 1 1 2 2 2 0 Surfactant protein C, N terminal propeptide MIG-14_Wnt-bd PF06664.12 RKO92600.1 - 6.8 5.8 12.1 2.1 7.5 7.1 2.2 1 1 1 2 2 2 0 Wnt-binding factor required for Wnt secretion MIG-14_Wnt-bd PF06664.12 RKO92601.1 - 1.7 7.8 11.7 0.22 10.7 6.1 2.1 1 1 2 3 3 3 0 Wnt-binding factor required for Wnt secretion DPM3 PF08285.11 RKO92601.1 - 5.2 7.3 9.3 9.6 6.5 4.4 3.0 2 1 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF21 PF01595.20 RKO92601.1 - 5.5 6.7 8.9 0.86 9.3 2.6 2.4 2 1 0 2 2 2 0 Cyclin M transmembrane N-terminal domain DUF3668 PF12416.8 RKO92602.1 - 4.9e-25 88.7 0.0 1.1e-24 87.5 0.0 1.6 2 0 0 2 2 2 1 Cep120 protein C2 PF00168.30 RKO92602.1 - 6.1e-05 23.2 0.0 0.0023 18.2 0.0 2.3 2 0 0 2 2 2 1 C2 domain DUF2418 PF10332.9 RKO92603.1 - 3.1e-10 40.4 0.1 6.8e-10 39.4 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2418) DUF4272 PF14094.6 RKO92603.1 - 0.074 12.3 0.0 0.12 11.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4272) zf-RanBP PF00641.18 RKO92604.1 - 1.9e-30 103.8 34.5 3.5e-10 39.0 1.5 4.2 4 0 0 4 4 4 4 Zn-finger in Ran binding protein and others Rubredoxin PF00301.20 RKO92604.1 - 0.14 12.2 0.1 0.14 12.2 0.1 5.7 5 1 1 6 6 6 0 Rubredoxin FLYWCH_u PF16662.5 RKO92605.1 - 0.086 12.9 3.2 0.34 11.0 2.2 2.5 1 1 1 2 2 2 0 FLYWCH-type zinc finger-containing protein 1 CBF PF03914.17 RKO92606.1 - 0.034 14.2 0.2 0.084 12.9 0.2 1.6 1 0 0 1 1 1 0 CBF/Mak21 family zf-C2H2_4 PF13894.6 RKO92606.1 - 0.17 12.8 1.5 0.22 12.5 0.1 2.0 2 0 0 2 2 2 0 C2H2-type zinc finger Kelch_5 PF13854.6 RKO92608.1 - 2e-12 46.8 1.3 3.4e-06 26.9 0.0 4.2 4 0 0 4 4 4 2 Kelch motif Kelch_6 PF13964.6 RKO92608.1 - 3.9e-10 39.7 3.4 1.4e-05 25.2 0.1 3.9 3 1 1 4 4 4 2 Kelch motif Kelch_4 PF13418.6 RKO92608.1 - 3.3e-09 36.6 3.3 0.00033 20.6 0.0 3.8 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO92608.1 - 1.5e-06 27.6 1.3 0.002 17.7 0.0 3.5 3 1 0 3 3 3 2 Kelch motif Kelch_2 PF07646.15 RKO92608.1 - 1.3e-05 25.0 0.1 0.00057 19.7 0.0 2.7 2 0 0 2 2 2 1 Kelch motif Kelch_3 PF13415.6 RKO92608.1 - 2e-05 24.8 1.8 0.029 14.6 0.1 3.9 3 0 0 3 3 3 1 Galactose oxidase, central domain zf-C2H2 PF00096.26 RKO92610.1 - 5.2e-08 32.9 5.2 1.6e-05 25.1 1.3 2.7 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO92610.1 - 0.00036 21.1 3.0 0.11 13.4 0.7 2.7 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO92610.1 - 0.0018 18.6 0.5 0.0018 18.6 0.5 2.7 2 0 0 2 2 2 1 Zinc-finger double domain FOXP-CC PF16159.5 RKO92610.1 - 0.038 14.6 0.4 1.9 9.2 0.2 2.5 1 1 1 2 2 2 0 FOXP coiled-coil domain zf-C2H2_8 PF15909.5 RKO92610.1 - 0.14 12.5 0.5 0.53 10.6 0.5 1.9 1 1 0 1 1 1 0 C2H2-type zinc ribbon Cupin_8 PF13621.6 RKO92611.1 - 2.4e-32 112.6 0.1 2.5e-32 112.6 0.1 1.0 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 RKO92611.1 - 3.2e-08 33.4 0.1 3.3e-07 30.1 0.1 1.9 1 1 0 1 1 1 1 Cupin superfamily protein JmjC PF02373.22 RKO92611.1 - 5e-05 23.7 0.0 0.00023 21.6 0.0 1.9 1 1 0 1 1 1 1 JmjC domain, hydroxylase Cupin_2 PF07883.11 RKO92611.1 - 0.076 12.7 0.2 0.67 9.7 0.0 2.2 2 1 0 2 2 2 0 Cupin domain Ceramidase PF05875.12 RKO92614.1 - 6e-63 212.7 3.5 6.7e-63 212.6 3.5 1.0 1 0 0 1 1 1 1 Ceramidase UvrA_DNA-bind PF17755.1 RKO92617.1 - 0.099 13.0 0.1 0.18 12.2 0.1 1.4 1 0 0 1 1 1 0 UvrA DNA-binding domain GATase_5 PF13507.6 RKO92618.1 - 1.5e-91 306.1 0.0 2.3e-91 305.5 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AIRS_C PF02769.22 RKO92618.1 - 5.4e-42 143.6 0.6 2.1e-29 102.7 0.0 2.4 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain FGAR-AT_N PF18076.1 RKO92618.1 - 3e-31 107.8 0.0 5.2e-31 107.0 0.0 1.4 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase N-terminal FGAR-AT_linker PF18072.1 RKO92618.1 - 2.1e-21 76.2 0.0 4.7e-21 75.1 0.0 1.7 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase linker domain FHA PF00498.26 RKO92619.1 - 1.8e-11 44.2 1.1 2.3e-11 43.9 0.2 1.7 2 0 0 2 2 2 1 FHA domain G-patch PF01585.23 RKO92619.1 - 3.9e-11 42.7 0.1 6.9e-11 41.9 0.1 1.4 1 0 0 1 1 1 1 G-patch domain G-patch_2 PF12656.7 RKO92619.1 - 0.0014 18.7 0.0 0.0033 17.5 0.0 1.7 1 0 0 1 1 1 1 G-patch domain Yop-YscD_cpl PF16697.5 RKO92619.1 - 0.0097 16.2 0.0 0.025 14.9 0.0 1.7 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain PfkB PF00294.24 RKO92620.1 - 2.4e-12 46.8 0.0 3.4e-12 46.3 0.0 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Chromo PF00385.24 RKO92621.1 - 0.0031 17.4 0.0 0.0048 16.8 0.0 1.3 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain CS PF04969.16 RKO92626.1 - 3.3e-08 34.4 0.0 4.5e-08 34.0 0.0 1.2 1 0 0 1 1 1 1 CS domain ADH_N_assoc PF13823.6 RKO92626.1 - 0.1 12.6 0.4 0.41 10.6 0.1 2.1 2 0 0 2 2 2 0 Alcohol dehydrogenase GroES-associated UCH PF00443.29 RKO92627.1 - 1.4e-15 57.5 0.0 3.9e-15 56.0 0.0 1.7 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 RKO92627.1 - 1.1e-05 25.2 0.0 0.0006 19.5 0.0 2.4 2 0 0 2 2 2 2 Ubiquitin carboxyl-terminal hydrolase Vfa1 PF08432.10 RKO92627.1 - 0.16 12.3 4.3 0.43 10.9 4.3 1.7 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Pro_isomerase PF00160.21 RKO92628.1 - 2.6e-46 157.8 0.0 2.9e-46 157.6 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF4201 PF13870.6 RKO92632.1 - 0.00023 20.9 2.3 0.0003 20.6 2.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) YabA PF06156.13 RKO92632.1 - 0.0038 17.8 2.5 0.0057 17.3 2.5 1.2 1 0 0 1 1 1 1 Initiation control protein YabA DUF3847 PF12958.7 RKO92632.1 - 0.007 16.5 2.6 0.041 14.0 2.8 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF3847) CENP-Q PF13094.6 RKO92632.1 - 0.0099 16.1 0.6 0.011 16.0 0.6 1.1 1 0 0 1 1 1 1 CENP-Q, a CENPA-CAD centromere complex subunit OmpH PF03938.14 RKO92632.1 - 0.023 15.0 5.6 0.03 14.6 5.6 1.1 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DHR10 PF18595.1 RKO92632.1 - 0.04 14.0 5.8 0.051 13.6 5.8 1.2 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain FlaC_arch PF05377.11 RKO92632.1 - 0.051 14.0 0.9 0.092 13.1 0.9 1.5 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) Peptidase_S49_N PF08496.10 RKO92632.1 - 0.059 13.4 1.4 0.067 13.3 1.4 1.1 1 0 0 1 1 1 0 Peptidase family S49 N-terminal COMM_domain PF07258.14 RKO92632.1 - 0.1 12.7 2.6 0.19 11.9 2.6 1.4 1 0 0 1 1 1 0 COMM domain FapA PF03961.13 RKO92632.1 - 0.25 9.9 1.8 0.27 9.8 1.8 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A CLZ PF16526.5 RKO92632.1 - 0.43 11.0 6.1 0.85 10.0 5.4 1.7 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DPBB_1 PF03330.18 RKO92633.1 - 7.6e-05 22.9 0.1 7.6e-05 22.9 0.1 2.1 2 1 0 2 2 2 1 Lytic transglycolase ANF_receptor PF01094.28 RKO92637.1 - 1.3e-32 113.3 0.2 2.4e-32 112.4 0.2 1.4 1 0 0 1 1 1 1 Receptor family ligand binding region 7tm_3 PF00003.22 RKO92637.1 - 1.5e-27 96.8 15.0 2.7e-27 96.1 15.0 1.3 1 0 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR Peripla_BP_6 PF13458.6 RKO92637.1 - 1.1e-14 54.9 1.4 3.6e-14 53.2 0.8 2.0 2 1 0 2 2 2 1 Periplasmic binding protein DUF3975 PF13126.6 RKO92637.1 - 1.4 9.4 5.1 5 7.6 5.1 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF3975) ANAPC4_WD40 PF12894.7 RKO92638.1 - 1.3e-11 44.6 0.1 0.4 11.0 0.0 5.7 3 1 2 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 RKO92638.1 - 4.3e-11 43.2 6.6 0.036 14.9 0.1 7.1 9 0 0 9 9 7 3 WD domain, G-beta repeat Clathrin PF00637.20 RKO92638.1 - 0.001 19.0 5.3 0.15 12.0 0.3 4.3 1 1 1 3 3 3 1 Region in Clathrin and VPS TPR_7 PF13176.6 RKO92638.1 - 0.0044 17.0 13.6 0.21 11.7 1.4 5.4 5 2 0 5 5 4 1 Tetratricopeptide repeat Coatomer_WDAD PF04053.14 RKO92638.1 - 0.0089 15.1 7.9 13 4.7 0.0 6.0 4 3 3 8 8 8 0 Coatomer WD associated region TPR_2 PF07719.17 RKO92638.1 - 0.025 14.7 20.9 0.69 10.2 1.1 5.9 6 0 0 6 6 5 0 Tetratricopeptide repeat WD40_3 PF15911.5 RKO92638.1 - 0.025 14.6 0.0 1.1 9.3 0.0 2.6 2 0 0 2 2 2 0 WD domain, G-beta repeat PPR PF01535.20 RKO92638.1 - 0.086 13.1 0.0 26 5.3 0.0 3.6 3 0 0 3 3 2 0 PPR repeat PHTB1_N PF14727.6 RKO92638.1 - 0.095 12.0 0.0 0.18 11.1 0.0 1.3 1 0 0 1 1 1 0 PTHB1 N-terminus eIF3_N PF09440.10 RKO92638.1 - 0.097 13.1 0.3 0.29 11.5 0.3 1.8 1 0 0 1 1 1 0 eIF3 subunit 6 N terminal domain TPR_14 PF13428.6 RKO92638.1 - 0.11 13.3 11.0 25 6.0 0.2 5.6 5 0 0 5 5 5 0 Tetratricopeptide repeat PPR_1 PF12854.7 RKO92638.1 - 0.18 11.5 0.1 0.7 9.7 0.1 2.1 2 0 0 2 2 2 0 PPR repeat TPR_12 PF13424.6 RKO92638.1 - 0.41 11.0 13.5 1.5 9.1 0.2 5.6 5 1 0 5 5 5 0 Tetratricopeptide repeat TPR_8 PF13181.6 RKO92638.1 - 0.6 10.5 17.8 0.37 11.1 1.4 4.8 5 0 0 5 5 4 0 Tetratricopeptide repeat SNAP PF14938.6 RKO92638.1 - 0.69 9.3 15.1 0.24 10.8 3.4 2.7 3 0 0 3 3 3 0 Soluble NSF attachment protein, SNAP ANAPC3 PF12895.7 RKO92638.1 - 2 8.7 0.0 2 8.7 0.0 4.8 4 2 2 6 6 5 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 RKO92638.1 - 2.1 9.1 9.3 5.4 7.8 0.7 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_6 PF13174.6 RKO92638.1 - 8.3 7.3 10.5 81 4.2 0.6 4.5 3 0 0 3 3 3 0 Tetratricopeptide repeat Vps39_1 PF10366.9 RKO92638.1 - 9.4 6.6 6.8 5.4 7.3 0.7 3.3 1 1 3 4 4 4 0 Vacuolar sorting protein 39 domain 1 AraC_N PF06719.13 RKO92639.1 - 0.18 11.4 0.0 0.38 10.4 0.0 1.4 1 0 0 1 1 1 0 AraC-type transcriptional regulator N-terminus AKAP2_C PF15304.6 RKO92641.1 - 0.038 13.3 2.7 0.067 12.5 2.7 1.3 1 0 0 1 1 1 0 A-kinase anchor protein 2 C-terminus Spc7 PF08317.11 RKO92641.1 - 0.19 10.5 7.3 0.31 9.9 7.3 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Linker_histone PF00538.19 RKO92642.1 - 4.5e-23 81.4 0.3 4.5e-23 81.4 0.3 2.4 2 1 0 2 2 2 1 linker histone H1 and H5 family RHH_1 PF01402.21 RKO92642.1 - 0.11 12.5 0.1 0.58 10.2 0.1 2.1 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family DUF2981 PF11200.8 RKO92642.1 - 0.16 11.7 6.1 0.21 11.3 6.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) GREB1 PF15782.5 RKO92642.1 - 0.41 7.7 7.0 0.45 7.6 7.0 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer CDC27 PF09507.10 RKO92642.1 - 4.5 6.6 22.5 6 6.1 22.5 1.2 1 0 0 1 1 1 0 DNA polymerase subunit Cdc27 Dicty_REP PF05086.12 RKO92642.1 - 5.5 4.8 4.0 6.7 4.5 4.0 1.0 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Phosphoesterase PF04185.14 RKO92643.1 - 3.5e-22 79.1 1.5 9.6e-20 71.1 0.5 2.2 1 1 1 2 2 2 2 Phosphoesterase family Calcipressin PF04847.12 RKO92643.1 - 0.0048 16.7 0.0 0.0087 15.8 0.0 1.3 1 0 0 1 1 1 1 Calcipressin SHMT PF00464.19 RKO92644.1 - 4.9e-167 555.5 0.0 5.7e-167 555.3 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 RKO92644.1 - 0.017 14.4 0.0 0.12 11.7 0.0 2.1 1 1 0 1 1 1 0 Beta-eliminating lyase Macro PF01661.21 RKO92644.1 - 0.017 15.1 0.0 0.035 14.1 0.0 1.5 1 0 0 1 1 1 0 Macro domain DegT_DnrJ_EryC1 PF01041.17 RKO92644.1 - 0.073 12.4 0.0 0.12 11.6 0.0 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Sin3a_C PF16879.5 RKO92645.1 - 2.7e-71 240.6 0.1 2.7e-71 240.6 0.1 3.1 5 0 0 5 5 5 1 C-terminal domain of Sin3a protein PAH PF02671.21 RKO92645.1 - 1.8e-48 162.4 9.4 3.2e-18 65.6 2.5 4.7 4 0 0 4 4 4 3 Paired amphipathic helix repeat Sin3_corepress PF08295.12 RKO92645.1 - 8.4e-37 125.2 0.5 2.5e-36 123.7 0.1 2.1 2 0 0 2 2 2 1 Sin3 family co-repressor TPR_12 PF13424.6 RKO92647.1 - 2.6e-06 27.6 0.0 1.6 9.1 0.0 4.0 2 1 2 4 4 4 4 Tetratricopeptide repeat TPR_7 PF13176.6 RKO92647.1 - 1.6e-05 24.6 0.6 4.4 7.6 0.0 5.1 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_8 PF13181.6 RKO92647.1 - 0.00018 21.5 1.0 0.061 13.6 0.0 3.8 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 RKO92647.1 - 0.0016 18.4 5.6 5.6 7.3 0.0 5.6 7 0 0 7 7 7 1 Tetratricopeptide repeat TPR_19 PF14559.6 RKO92647.1 - 0.0059 17.1 0.2 0.07 13.7 0.0 2.8 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO92647.1 - 0.0066 17.2 0.1 5.6 8.1 0.0 4.3 3 2 2 5 5 5 1 Tetratricopeptide repeat TPR_1 PF00515.28 RKO92647.1 - 0.016 15.0 6.7 15 5.6 0.0 5.4 6 0 0 6 6 6 0 Tetratricopeptide repeat ComFB PF10719.9 RKO92647.1 - 0.021 14.9 1.2 0.41 10.8 0.2 2.5 2 0 0 2 2 2 0 Late competence development protein ComFB SNAP PF14938.6 RKO92647.1 - 0.035 13.5 2.4 1.1 8.6 0.2 2.4 2 0 0 2 2 2 0 Soluble NSF attachment protein, SNAP DUF285 PF03382.14 RKO92647.1 - 0.05 13.4 0.4 0.14 11.9 0.3 1.7 1 1 0 1 1 1 0 Mycoplasma protein of unknown function, DUF285 Lectin_leg-like PF03388.13 RKO92648.1 - 2.3e-69 233.3 0.4 2.5e-69 233.1 0.4 1.0 1 0 0 1 1 1 1 Legume-like lectin family Lectin_legB PF00139.19 RKO92648.1 - 0.00091 18.8 0.0 1.3 8.5 0.0 2.2 2 0 0 2 2 2 2 Legume lectin domain Med8 PF10232.9 RKO92649.1 - 4.5e-08 33.0 0.8 7.5e-08 32.3 0.8 1.3 1 1 0 1 1 1 1 Mediator of RNA polymerase II transcription complex subunit 8 AAA_lid_9 PF17871.1 RKO92649.1 - 0.13 12.2 1.5 0.19 11.6 0.4 1.8 2 0 0 2 2 2 0 AAA lid domain Reeler PF02014.16 RKO92650.1 - 2.5e-11 44.4 0.0 3.4e-11 44.0 0.0 1.2 1 0 0 1 1 1 1 Reeler domain Reeler PF02014.16 RKO92651.1 - 5.4e-09 36.9 0.0 7.7e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 Reeler domain Reeler PF02014.16 RKO92652.1 - 9.2e-05 23.2 0.0 0.00014 22.6 0.0 1.2 1 0 0 1 1 1 1 Reeler domain Response_reg PF00072.24 RKO92654.1 - 3e-16 59.6 0.1 6.6e-15 55.3 0.1 2.3 1 1 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.26 RKO92654.1 - 1.2e-12 48.3 0.0 3.5e-12 46.8 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HECT PF00632.25 RKO92655.1 - 5.3e-80 269.2 0.0 6.4e-80 268.9 0.0 1.0 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Rad60-SLD PF11976.8 RKO92656.1 - 1.1e-17 63.6 0.1 1.3e-17 63.4 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 RKO92656.1 - 7.7e-11 41.6 0.1 8.4e-11 41.5 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin family SH3_1 PF00018.28 RKO92656.1 - 0.039 13.6 0.1 0.081 12.5 0.1 1.5 1 0 0 1 1 1 0 SH3 domain zf-C3HC4 PF00097.25 RKO92657.1 - 1.6e-06 27.9 12.9 2.4e-06 27.3 12.9 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 RKO92657.1 - 4.5e-06 26.9 12.5 7.5e-06 26.2 12.5 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 RKO92657.1 - 8.9e-06 25.6 9.2 8.9e-06 25.6 9.2 2.2 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 RKO92657.1 - 1.8e-05 24.6 11.1 3.1e-05 23.8 11.1 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 RKO92657.1 - 2.2e-05 24.2 9.6 3.3e-05 23.6 9.6 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 RKO92657.1 - 0.0001 22.1 13.2 0.00047 19.9 13.6 1.9 1 1 1 2 2 2 2 Zinc finger, C3HC4 type (RING finger) zf-ACC PF17848.1 RKO92657.1 - 0.013 15.6 0.3 0.031 14.4 0.3 1.6 1 0 0 1 1 1 0 Acetyl-coA carboxylase zinc finger domain zf-C3HC4_4 PF15227.6 RKO92657.1 - 0.03 14.5 10.0 0.075 13.2 10.0 1.7 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 RKO92657.1 - 0.22 11.4 10.9 0.46 10.4 10.5 1.8 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-Nse PF11789.8 RKO92657.1 - 0.44 10.4 7.6 1 9.3 7.6 1.6 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit TerY_C PF15616.6 RKO92657.1 - 0.82 9.8 3.1 1.4 9.0 3.1 1.4 1 0 0 1 1 1 0 TerY-C metal binding domain zf-RING_6 PF14835.6 RKO92657.1 - 1.2 9.1 5.7 4 7.4 5.5 1.9 1 1 1 2 2 2 0 zf-RING of BARD1-type protein zf-rbx1 PF12678.7 RKO92657.1 - 5.4 7.4 12.6 11 6.3 12.6 1.5 1 1 0 1 1 1 0 RING-H2 zinc finger domain Spt5-NGN PF03439.13 RKO92660.1 - 9.2e-25 86.4 0.0 1.8e-24 85.4 0.0 1.5 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section CTD PF12815.7 RKO92660.1 - 1.2e-24 86.6 45.6 1.6e-14 54.2 9.0 3.7 1 1 2 3 3 3 2 Spt5 C-terminal nonapeptide repeat binding Spt4 Spt5_N PF11942.8 RKO92660.1 - 4.9e-16 59.5 16.3 4.9e-16 59.5 16.3 2.4 2 0 0 2 2 2 1 Spt5 transcription elongation factor, acidic N-terminal KOW PF00467.29 RKO92660.1 - 4.3e-12 45.5 30.7 5.6e-05 22.9 0.0 6.5 7 0 0 7 7 7 5 KOW motif PCB_OB PF17092.5 RKO92660.1 - 0.0011 19.7 5.0 0.063 14.0 0.2 4.2 5 0 0 5 5 5 1 Penicillin-binding protein OB-like domain S1 PF00575.23 RKO92660.1 - 0.31 11.4 3.7 5.3 7.5 0.1 3.7 4 0 0 4 4 4 0 S1 RNA binding domain SDA1 PF05285.12 RKO92660.1 - 5.2 6.4 24.2 7.7 5.8 24.2 1.2 1 0 0 1 1 1 0 SDA1 DUF3818 PF12825.7 RKO92663.1 - 7.6e-44 150.1 0.0 1.9e-24 86.4 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function in PX-proteins (DUF3818) PXB PF12828.7 RKO92663.1 - 1.3e-06 28.4 0.0 2.6e-06 27.5 0.0 1.5 1 0 0 1 1 1 1 PX-associated Hormone_3 PF00159.18 RKO92663.1 - 0.11 12.6 0.6 0.46 10.6 0.1 2.4 3 0 0 3 3 3 0 Pancreatic hormone peptide PX PF00787.24 RKO92663.1 - 0.17 11.9 0.0 0.34 10.9 0.0 1.5 1 0 0 1 1 1 0 PX domain RasGEF PF00617.19 RKO92664.1 - 7.7e-23 81.6 0.0 8.9e-23 81.4 0.0 1.1 1 0 0 1 1 1 1 RasGEF domain XisH PF08814.10 RKO92664.1 - 0.14 12.3 0.0 0.48 10.6 0.0 1.7 1 1 1 2 2 2 0 XisH protein Bestrophin PF01062.21 RKO92666.1 - 9.3e-47 159.8 0.1 1.2e-46 159.4 0.1 1.0 1 0 0 1 1 1 1 Bestrophin, RFP-TM, chloride channel DnaJ PF00226.31 RKO92667.1 - 6.3e-26 90.3 0.9 1.6e-25 89.0 0.9 1.7 1 0 0 1 1 1 1 DnaJ domain TPR_1 PF00515.28 RKO92667.1 - 4.4e-18 64.3 1.2 0.0001 21.9 0.0 6.7 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_2 PF07719.17 RKO92667.1 - 1.3e-13 49.9 1.6 0.0094 16.0 0.0 7.2 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_19 PF14559.6 RKO92667.1 - 8.7e-12 45.4 5.1 0.4 11.2 0.0 6.2 5 2 0 5 5 5 4 Tetratricopeptide repeat TPR_11 PF13414.6 RKO92667.1 - 2.3e-10 40.0 0.2 0.0074 15.9 0.0 5.4 6 0 0 6 6 6 3 TPR repeat TPR_16 PF13432.6 RKO92667.1 - 1.1e-07 32.4 5.1 0.18 12.4 0.1 6.0 6 1 0 6 6 6 1 Tetratricopeptide repeat TPR_8 PF13181.6 RKO92667.1 - 1.6e-07 31.0 4.1 0.014 15.6 0.0 6.5 7 0 0 7 7 7 1 Tetratricopeptide repeat TPR_14 PF13428.6 RKO92667.1 - 5.1e-07 30.0 9.8 1.3 10.0 0.1 7.0 5 2 2 7 7 7 2 Tetratricopeptide repeat TPR_12 PF13424.6 RKO92667.1 - 3.6e-06 27.2 3.6 1.5 9.2 0.0 5.3 4 1 2 6 6 6 1 Tetratricopeptide repeat TPR_7 PF13176.6 RKO92667.1 - 0.00017 21.4 0.6 19 5.6 0.0 6.2 7 0 0 7 7 7 0 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO92667.1 - 0.00022 21.4 0.9 13 6.1 0.2 5.2 5 1 1 6 6 6 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.6 RKO92667.1 - 0.0075 16.4 3.1 0.37 11.0 0.1 4.3 5 0 0 5 5 5 1 Tetratricopeptide repeat DUF3856 PF12968.7 RKO92667.1 - 0.009 16.1 1.9 17 5.5 0.1 5.0 4 2 1 5 5 5 0 Domain of Unknown Function (DUF3856) Catalase-rel PF06628.12 RKO92667.1 - 0.051 13.8 0.0 0.21 11.8 0.0 2.2 1 0 0 1 1 1 0 Catalase-related immune-responsive DUF357 PF04010.13 RKO92667.1 - 0.086 12.9 0.5 0.68 10.0 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF357) SHNi-TPR PF10516.9 RKO92667.1 - 0.39 10.2 4.0 88 2.7 0.1 4.4 4 1 0 4 4 4 0 SHNi-TPR Myosin_head PF00063.21 RKO92668.1 - 1.7e-205 684.3 22.6 1.4e-138 463.1 4.0 4.1 4 1 1 5 5 5 3 Myosin head (motor domain) MyTH4 PF00784.17 RKO92668.1 - 1.1e-36 125.6 0.0 1.7e-18 67.1 0.0 3.7 3 0 0 3 3 3 2 MyTH4 domain FERM_M PF00373.18 RKO92668.1 - 3e-23 82.4 0.0 7e-15 55.5 0.0 3.1 2 0 0 2 2 2 2 FERM central domain IQ PF00612.27 RKO92668.1 - 1.8e-10 39.6 10.8 0.00099 18.7 1.0 3.9 3 0 0 3 3 3 3 IQ calmodulin-binding motif RA PF00788.23 RKO92668.1 - 3.5e-10 40.4 0.0 0.00097 19.7 0.0 2.9 3 0 0 3 3 3 2 Ras association (RalGDS/AF-6) domain IRS PF02174.17 RKO92668.1 - 0.00031 20.6 0.0 0.16 11.9 0.0 2.7 2 0 0 2 2 2 2 PTB domain (IRS-1 type) PID PF00640.23 RKO92668.1 - 0.0014 18.7 0.2 2 8.5 0.0 2.6 2 0 0 2 2 2 2 Phosphotyrosine interaction domain (PTB/PID) RsgA_GTPase PF03193.16 RKO92668.1 - 0.0062 16.5 0.0 0.016 15.1 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase FERM_N PF09379.10 RKO92668.1 - 0.0095 15.9 0.0 0.13 12.3 0.0 2.5 2 0 0 2 2 2 1 FERM N-terminal domain ABC_tran PF00005.27 RKO92668.1 - 0.031 14.8 0.1 0.12 12.9 0.1 2.0 1 0 0 1 1 1 0 ABC transporter AAA_16 PF13191.6 RKO92668.1 - 0.063 13.7 0.1 0.41 11.0 0.0 2.4 2 0 0 2 2 2 0 AAA ATPase domain COX2 PF00116.20 RKO92670.1 - 8e-39 132.2 0.0 1.7e-38 131.2 0.0 1.6 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain COX2_TM PF02790.15 RKO92670.1 - 1.9e-13 50.4 2.5 3e-13 49.7 2.5 1.3 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, transmembrane domain DUF1943 PF09172.11 RKO92670.1 - 0.19 11.0 0.0 0.23 10.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Muskelin_N PF06588.11 RKO92671.1 - 2.7e-82 275.5 0.9 3.9e-82 275.0 0.9 1.1 1 0 0 1 1 1 1 Muskelin N-terminus Kelch_3 PF13415.6 RKO92671.1 - 5.9e-11 42.4 3.0 6.8e-08 32.6 0.1 4.0 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO92671.1 - 3.9e-10 39.2 2.3 2e-07 30.5 0.2 3.0 2 0 0 2 2 2 2 Kelch motif Kelch_2 PF07646.15 RKO92671.1 - 1e-07 31.6 0.4 4.5e-07 29.6 0.4 2.1 1 0 0 1 1 1 1 Kelch motif Kelch_5 PF13854.6 RKO92671.1 - 7.1e-07 29.1 0.1 4e-05 23.5 0.0 2.9 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 RKO92671.1 - 8.4e-07 29.1 0.3 0.00087 19.5 0.1 3.7 3 0 0 3 3 3 1 Kelch motif F5_F8_type_C PF00754.25 RKO92671.1 - 9.1e-05 22.6 0.0 0.00017 21.7 0.0 1.3 1 0 0 1 1 1 1 F5/8 type C domain Kelch_4 PF13418.6 RKO92671.1 - 0.00017 21.5 5.4 0.011 15.7 0.3 3.4 3 0 0 3 3 3 2 Galactose oxidase, central domain Sad1_UNC PF07738.13 RKO92671.1 - 0.066 13.2 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 Sad1 / UNC-like C-terminal Coatomer_E PF04733.14 RKO92672.1 - 6e-74 249.1 0.0 6.8e-74 248.9 0.0 1.0 1 0 0 1 1 1 1 Coatomer epsilon subunit TPR_19 PF14559.6 RKO92672.1 - 2.1e-07 31.3 12.6 0.0017 18.8 0.4 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO92672.1 - 0.00012 22.3 0.2 0.31 11.3 0.0 2.7 3 0 0 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_2 PF07719.17 RKO92672.1 - 0.00039 20.3 0.2 0.41 10.9 0.0 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 RKO92672.1 - 0.012 15.9 0.9 0.08 13.4 0.1 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF4919 PF16266.5 RKO92672.1 - 0.16 11.9 0.0 0.28 11.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4919) TPR_14 PF13428.6 RKO92672.1 - 0.21 12.5 13.8 0.35 11.8 0.0 4.7 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_11 PF13414.6 RKO92672.1 - 0.54 10.0 4.2 0.33 10.7 0.7 2.4 3 0 0 3 3 3 0 TPR repeat MIP PF00230.20 RKO92673.1 - 5.5e-42 144.0 12.9 6.5e-42 143.8 12.9 1.1 1 0 0 1 1 1 1 Major intrinsic protein TFIIF_alpha PF05793.12 RKO92675.1 - 4.1e-16 58.7 2.0 6.1e-16 58.1 2.0 1.2 1 0 0 1 1 1 1 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) SAC3_GANP PF03399.16 RKO92676.1 - 3.2e-90 302.5 1.1 3.6e-90 302.3 1.1 1.0 1 0 0 1 1 1 1 SAC3/GANP family L_biotic_typeA PF04604.13 RKO92678.1 - 0.19 11.6 0.7 21 5.1 0.2 2.6 2 0 0 2 2 2 0 Type-A lantibiotic F-box-like PF12937.7 RKO92680.1 - 0.35 10.8 3.3 1.4 8.9 0.0 2.6 2 0 0 2 2 2 0 F-box-like VWA_2 PF13519.6 RKO92682.1 - 0.0011 19.6 0.1 0.0027 18.3 0.0 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain vWA-TerF-like PF10138.9 RKO92682.1 - 0.0043 17.2 0.0 0.0063 16.6 0.0 1.2 1 0 0 1 1 1 1 vWA found in TerF C terminus VWA PF00092.28 RKO92682.1 - 0.0051 17.1 0.0 0.02 15.1 0.0 1.8 2 0 0 2 2 2 1 von Willebrand factor type A domain Bromodomain PF00439.25 RKO92683.1 - 7.2e-124 404.1 0.0 1.9e-19 69.5 0.0 6.7 6 1 1 7 7 7 6 Bromodomain SRP-alpha_N PF04086.13 RKO92683.1 - 8.3e-05 22.7 8.3 0.094 12.6 7.7 3.4 3 0 0 3 3 3 2 Signal recognition particle, alpha subunit, N-terminal DUF5427 PF10310.9 RKO92683.1 - 0.45 9.4 12.1 0.87 8.5 12.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5427) SAPS PF04499.15 RKO92683.1 - 1.1 8.0 2.8 2.8 6.6 1.9 1.8 2 0 0 2 2 2 0 SIT4 phosphatase-associated protein TFIIF_alpha PF05793.12 RKO92683.1 - 1.1 7.7 17.1 2.5 6.6 17.1 1.5 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) RR_TM4-6 PF06459.12 RKO92683.1 - 2 8.2 10.5 3.9 7.2 10.5 1.4 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 U79_P34 PF03064.16 RKO92683.1 - 3.2 7.1 11.9 5.7 6.2 11.9 1.3 1 0 0 1 1 1 0 HSV U79 / HCMV P34 CPSF100_C PF13299.6 RKO92683.1 - 4.2 7.5 6.5 12 6.1 6.5 1.7 1 0 0 1 1 1 0 Cleavage and polyadenylation factor 2 C-terminal AP3D1 PF06375.11 RKO92683.1 - 6.4 7.0 21.3 15 5.8 21.3 1.6 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 tRNA_int_endo PF01974.17 RKO92684.1 - 6e-17 61.5 0.0 9.9e-17 60.8 0.0 1.3 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain Peptidase_C13 PF01650.18 RKO92686.1 - 6.8e-18 65.1 0.2 8.2e-18 64.8 0.2 1.0 1 0 0 1 1 1 1 Peptidase C13 family PAS_8 PF13188.7 RKO92686.1 - 0.11 12.5 0.0 0.23 11.5 0.0 1.6 1 0 0 1 1 1 0 PAS domain SNF2_N PF00176.23 RKO92688.1 - 2e-23 82.7 0.0 2.5e-23 82.4 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Ish1 PF10281.9 RKO92688.1 - 0.059 13.7 1.9 0.075 13.4 0.6 1.9 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein PAS_10 PF13596.6 RKO92690.1 - 0.17 12.5 0.2 1.3 9.6 0.0 2.3 2 0 0 2 2 2 0 PAS domain LRR_6 PF13516.6 RKO92691.1 - 3.2e-10 39.2 15.6 0.7 10.1 0.1 8.5 8 0 0 8 8 8 5 Leucine Rich repeat GAT PF03127.14 RKO92691.1 - 6.1e-09 36.1 0.0 4.5e-08 33.3 0.0 2.6 3 0 0 3 3 3 1 GAT domain LRR_1 PF00560.33 RKO92691.1 - 0.016 15.7 9.0 24 6.0 0.1 6.6 7 0 0 7 7 7 0 Leucine Rich Repeat LRR_4 PF12799.7 RKO92691.1 - 3.2 8.3 22.9 3.2 8.3 3.3 6.8 5 2 3 8 8 8 0 Leucine Rich repeats (2 copies) Actin PF00022.19 RKO92693.1 - 7.2e-38 130.2 0.0 8.4e-38 130.0 0.0 1.0 1 0 0 1 1 1 1 Actin VPS53_C PF16854.5 RKO92694.1 - 0.041 13.8 0.0 0.049 13.5 0.0 1.1 1 0 0 1 1 1 0 Vacuolar protein sorting-associated protein 53 C-terminus ComX PF05952.12 RKO92694.1 - 0.17 11.9 0.0 0.32 11.0 0.0 1.4 1 0 0 1 1 1 0 Bacillus competence pheromone ComX AAA_11 PF13086.6 RKO92695.1 - 2.6e-58 197.9 0.0 6e-58 196.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_12 PF13087.6 RKO92695.1 - 4.6e-41 140.6 0.0 1.2e-40 139.3 0.0 1.7 1 0 0 1 1 1 1 AAA domain SEN1_N PF12726.7 RKO92695.1 - 4.4e-16 58.3 4.4 4e-07 28.7 0.4 3.2 3 0 0 3 3 3 3 SEN1 N terminal AAA_30 PF13604.6 RKO92695.1 - 0.0046 16.7 0.0 0.011 15.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 RKO92695.1 - 0.0063 16.9 0.0 0.015 15.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain TPR_21 PF09976.9 RKO92696.1 - 0.16 11.7 0.0 0.37 10.5 0.0 1.6 1 0 0 1 1 1 0 Tetratricopeptide repeat-like domain CDC45 PF02724.14 RKO92697.1 - 0.094 11.0 3.4 0.11 10.8 3.4 1.0 1 0 0 1 1 1 0 CDC45-like protein LIN37 PF15306.6 RKO92697.1 - 0.26 11.5 2.4 0.41 10.9 2.4 1.2 1 0 0 1 1 1 0 LIN37 FAM176 PF14851.6 RKO92697.1 - 0.47 10.1 5.9 0.79 9.4 5.9 1.3 1 0 0 1 1 1 0 FAM176 family NOA36 PF06524.12 RKO92697.1 - 0.76 9.0 5.0 1.5 8.1 5.0 1.4 1 0 0 1 1 1 0 NOA36 protein DNA_pol_phi PF04931.13 RKO92697.1 - 6.4 4.8 6.9 7.2 4.6 6.9 1.1 1 0 0 1 1 1 0 DNA polymerase phi LRR_4 PF12799.7 RKO92698.1 - 0.0078 16.6 0.0 6.5 7.3 0.0 3.1 3 0 0 3 3 3 2 Leucine Rich repeats (2 copies) F-box PF00646.33 RKO92698.1 - 0.037 13.9 0.0 0.086 12.8 0.0 1.6 1 0 0 1 1 1 0 F-box domain LRR_6 PF13516.6 RKO92698.1 - 0.28 11.3 2.0 5.8 7.2 0.5 3.0 3 0 0 3 3 3 0 Leucine Rich repeat IFT46_B_C PF12317.8 RKO92699.1 - 1.9e-61 207.5 1.5 5.5e-61 206.0 1.5 1.7 1 1 0 1 1 1 1 Intraflagellar transport complex B protein 46 C terminal zf-CpG_bind_C PF12269.8 RKO92700.1 - 0.23 11.2 1.0 0.4 10.4 0.2 1.7 2 0 0 2 2 2 0 CpG binding protein zinc finger C terminal domain BAH PF01426.18 RKO92702.1 - 4.1e-06 26.7 0.0 0.004 17.0 0.0 2.3 2 0 0 2 2 2 2 BAH domain DNA_methylase PF00145.17 RKO92702.1 - 0.019 14.3 0.0 0.026 13.8 0.0 1.1 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase Copine PF07002.16 RKO92703.1 - 0.068 12.6 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 Copine Lung_7-TM_R PF06814.13 RKO92705.1 - 2.1e-58 197.9 21.2 2.4e-58 197.7 21.2 1.0 1 0 0 1 1 1 1 Lung seven transmembrane receptor TMEM156 PF15106.6 RKO92705.1 - 0.032 13.7 0.2 0.063 12.7 0.2 1.5 1 0 0 1 1 1 0 TMEM156 protein family Ninjurin PF04923.12 RKO92705.1 - 1.6 8.7 5.7 0.28 11.1 1.4 2.0 2 0 0 2 2 2 0 Ninjurin DUF1516 PF07457.11 RKO92705.1 - 6.2 7.1 16.3 0.19 11.9 1.3 3.5 3 1 1 4 4 4 0 Protein of unknown function (DUF1516) MARVEL PF01284.23 RKO92705.1 - 9.6 6.2 17.5 17 5.5 12.5 2.9 1 1 1 2 2 2 0 Membrane-associating domain DUF89 PF01937.19 RKO92710.1 - 1.5e-101 339.9 0.2 1.7e-101 339.7 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF89 Cys_Met_Meta_PP PF01053.20 RKO92711.1 - 1.8e-31 109.0 0.0 2.6e-31 108.5 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 RKO92711.1 - 0.013 14.7 0.0 0.021 14.0 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class I and II Cupin_3 PF05899.12 RKO92711.1 - 0.084 12.6 0.1 0.29 10.8 0.0 2.0 3 0 0 3 3 3 0 Protein of unknown function (DUF861) CN_hydrolase PF00795.22 RKO92712.1 - 3.1e-43 148.0 0.0 4.2e-43 147.6 0.0 1.2 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase NAD_synthase PF02540.17 RKO92712.1 - 3.8e-26 91.7 0.0 1.1e-25 90.1 0.0 1.7 1 1 0 1 1 1 1 NAD synthase Asn_synthase PF00733.21 RKO92712.1 - 0.15 11.7 0.0 0.24 11.0 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase Acyltransferase PF01553.21 RKO92714.1 - 4.7e-05 23.0 0.0 7.7e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Acyltransferase Pkinase PF00069.25 RKO92716.1 - 2.5e-67 227.1 0.0 2.9e-67 226.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO92716.1 - 1.2e-46 159.2 0.0 1.5e-46 158.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO92716.1 - 6.3e-06 25.2 0.0 9.4e-06 24.6 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 RKO92716.1 - 0.013 14.5 0.0 0.45 9.4 0.0 2.1 1 1 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 RKO92716.1 - 0.017 14.5 0.0 0.026 13.8 0.0 1.3 1 0 0 1 1 1 0 Kinase-like Seadorna_VP7 PF07387.11 RKO92716.1 - 0.018 14.1 0.0 0.03 13.4 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 Kdo PF06293.14 RKO92716.1 - 0.047 13.0 0.4 0.077 12.3 0.0 1.5 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family RRM_2 PF04059.12 RKO92717.1 - 2.5e-44 149.4 1.1 2.7e-44 149.3 1.1 1.0 1 0 0 1 1 1 1 RNA recognition motif 2 BRAP2 PF07576.12 RKO92717.1 - 0.0024 18.0 0.1 0.0029 17.8 0.1 1.1 1 0 0 1 1 1 1 BRCA1-associated protein 2 Smg4_UPF3 PF03467.15 RKO92717.1 - 0.0071 16.4 0.0 0.0094 16.0 0.0 1.3 1 1 0 1 1 1 1 Smg-4/UPF3 family RRM_1 PF00076.22 RKO92717.1 - 0.021 14.6 0.2 0.049 13.4 0.2 1.6 1 1 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PHM7_cyt PF14703.6 RKO92717.1 - 0.093 13.0 0.1 0.18 12.0 0.1 1.5 1 1 1 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter DnaJ PF00226.31 RKO92719.1 - 1.5e-19 69.9 0.1 3.3e-19 68.8 0.1 1.6 1 0 0 1 1 1 1 DnaJ domain LRR_6 PF13516.6 RKO92719.1 - 7.4e-05 22.5 0.8 0.43 10.7 0.0 3.7 4 0 0 4 4 4 2 Leucine Rich repeat LRR_4 PF12799.7 RKO92719.1 - 0.0014 19.0 0.0 0.12 12.8 0.0 2.4 2 0 0 2 2 2 1 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO92719.1 - 0.066 13.0 0.0 6.3 6.6 0.0 2.4 2 0 0 2 2 2 0 Leucine rich repeat RasGEF PF00617.19 RKO92720.1 - 1.1e-41 143.0 0.2 1.8e-41 142.3 0.2 1.3 1 0 0 1 1 1 1 RasGEF domain PH_9 PF15410.6 RKO92720.1 - 2.7e-09 37.4 0.0 4.7e-09 36.6 0.0 1.4 1 0 0 1 1 1 1 Pleckstrin homology domain PH PF00169.29 RKO92720.1 - 1.8e-07 31.6 0.3 7e-07 29.7 0.3 1.9 1 1 0 1 1 1 1 PH domain XPG_N PF00752.17 RKO92722.1 - 6.5e-34 116.4 0.0 1e-33 115.8 0.0 1.2 1 0 0 1 1 1 1 XPG N-terminal domain Peptidase_S9 PF00326.21 RKO92723.1 - 5e-19 68.6 0.1 8.6e-19 67.9 0.1 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family PD40 PF07676.12 RKO92723.1 - 3.1e-06 27.0 0.1 0.0025 17.7 0.0 3.2 3 0 0 3 3 3 2 WD40-like Beta Propeller Repeat Abhydrolase_1 PF00561.20 RKO92723.1 - 6e-05 22.8 0.4 9.7e-05 22.1 0.4 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 RKO92723.1 - 0.0018 17.6 0.1 0.0029 16.9 0.1 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 COesterase PF00135.28 RKO92723.1 - 0.0081 15.1 0.1 0.012 14.5 0.1 1.1 1 0 0 1 1 1 1 Carboxylesterase family AXE1 PF05448.12 RKO92723.1 - 0.042 12.5 0.1 0.5 9.0 0.1 2.0 1 1 0 1 1 1 0 Acetyl xylan esterase (AXE1) Abhydrolase_3 PF07859.13 RKO92723.1 - 0.052 13.4 0.0 0.094 12.6 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold DUF2920 PF11144.8 RKO92723.1 - 0.22 10.7 0.1 0.32 10.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2920) PRP21_like_P PF12230.8 RKO92725.1 - 9.4e-51 172.7 0.5 9.4e-51 172.7 0.5 1.9 2 0 0 2 2 2 1 Pre-mRNA splicing factor PRP21 like protein Surp PF01805.20 RKO92725.1 - 1.5e-36 124.2 5.4 4.2e-19 68.3 1.0 2.4 2 0 0 2 2 2 2 Surp module zf-ACC PF17848.1 RKO92725.1 - 0.002 18.1 0.0 0.004 17.2 0.0 1.4 1 0 0 1 1 1 1 Acetyl-coA carboxylase zinc finger domain zf_UBZ PF18439.1 RKO92725.1 - 0.0027 17.3 0.2 0.0059 16.2 0.2 1.6 1 0 0 1 1 1 1 Ubiquitin-Binding Zinc Finger PXB PF12828.7 RKO92726.1 - 0.0017 18.3 1.2 4.7 7.2 1.0 3.1 1 1 0 1 1 1 1 PX-associated SLR1-BP PF07333.12 RKO92726.1 - 9.5 6.8 8.3 94 3.6 0.2 3.1 3 0 0 3 3 3 0 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) HABP4_PAI-RBP1 PF04774.15 RKO92727.1 - 2e-09 38.3 15.6 2e-09 38.3 15.6 2.6 3 1 0 3 3 3 1 Hyaluronan / mRNA binding family Stm1_N PF09598.10 RKO92727.1 - 0.0088 16.9 0.5 0.0088 16.9 0.5 4.5 3 1 1 4 4 4 1 Stm1 THRAP3_BCLAF1 PF15440.6 RKO92727.1 - 0.21 10.6 6.6 0.26 10.3 6.6 1.2 1 0 0 1 1 1 0 THRAP3/BCLAF1 family F-box-like PF12937.7 RKO92728.1 - 5.5e-05 23.0 0.5 5.5e-05 23.0 0.5 3.2 3 0 0 3 3 3 1 F-box-like RE_BsaWI PF18643.1 RKO92728.1 - 0.16 11.9 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 BsaWI restriction endonuclease type 2 Ribosomal_S13_N PF08069.12 RKO92729.1 - 3.2e-32 110.3 0.1 3.9e-32 110.1 0.1 1.1 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain YflT PF11181.8 RKO92729.1 - 0.0043 17.5 0.0 0.0051 17.3 0.0 1.1 1 0 0 1 1 1 1 Heat induced stress protein YflT SepRS_C PF18006.1 RKO92731.1 - 0.36 10.9 1.0 0.7 10.0 0.2 1.9 2 0 0 2 2 2 0 O-phosphoseryl-tRNA synthetase C-terminal domain WD40 PF00400.32 RKO92733.1 - 7.8e-12 45.5 14.3 0.0072 17.2 0.4 5.7 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO92733.1 - 1.2e-05 25.5 0.0 1.6 9.1 0.0 4.1 4 1 0 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain ADK PF00406.22 RKO92734.1 - 1.3e-46 158.4 0.0 9.4e-27 94.0 0.0 2.3 2 0 0 2 2 2 2 Adenylate kinase AAA_17 PF13207.6 RKO92734.1 - 1.4e-22 80.6 0.0 5.6e-11 43.0 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 RKO92734.1 - 0.00062 20.3 0.0 0.0041 17.7 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 RKO92734.1 - 0.0014 18.8 0.0 0.0071 16.5 0.0 2.2 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 RKO92734.1 - 0.0079 15.5 0.0 0.021 14.1 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin Hydin_ADK PF17213.3 RKO92734.1 - 0.015 15.6 1.3 0.98 9.7 0.0 2.6 2 1 1 3 3 3 0 Hydin Adenylate kinase-like domain RIIa PF02197.17 RKO92734.1 - 0.023 14.4 0.0 0.049 13.3 0.0 1.6 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit DUF5582 PF17819.1 RKO92734.1 - 0.045 14.2 0.0 0.078 13.4 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5582) AAA_5 PF07728.14 RKO92734.1 - 0.048 13.7 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 RKO92734.1 - 0.052 13.9 0.0 0.091 13.1 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain eIF3_N PF09440.10 RKO92734.1 - 0.071 13.6 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 eIF3 subunit 6 N terminal domain AAA_22 PF13401.6 RKO92734.1 - 0.14 12.4 0.0 0.35 11.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain DUF2470 PF10615.9 RKO92735.1 - 0.0032 18.1 0.1 0.0066 17.1 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2470) Muted PF14942.6 RKO92735.1 - 0.019 15.3 9.9 0.019 15.3 9.9 2.1 1 1 1 2 2 2 0 Organelle biogenesis, Muted-like protein DUF4407 PF14362.6 RKO92735.1 - 0.12 11.7 13.1 0.17 11.2 13.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4482 PF14818.6 RKO92735.1 - 0.13 13.1 17.3 0.17 12.8 15.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4482) DUF4446 PF14584.6 RKO92735.1 - 1.2 9.2 5.9 0.38 10.7 1.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) LPP PF04728.13 RKO92735.1 - 2 8.8 9.6 1.1 9.7 1.1 3.0 1 1 1 2 2 2 0 Lipoprotein leucine-zipper DUF2203 PF09969.9 RKO92735.1 - 3.6 8.3 14.9 7.7 7.3 6.4 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) V_ATPase_I PF01496.19 RKO92735.1 - 3.9 5.3 11.2 4.6 5.0 11.2 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family RCC1 PF00415.18 RKO92736.1 - 1.2e-12 48.3 13.8 3.1e-07 30.9 0.0 5.8 6 1 1 7 7 7 3 Regulator of chromosome condensation (RCC1) repeat F-box PF00646.33 RKO92736.1 - 1.6e-07 31.0 0.5 3.3e-07 30.0 0.5 1.4 1 0 0 1 1 1 1 F-box domain F-box-like PF12937.7 RKO92736.1 - 2.1e-06 27.5 0.5 2.1e-06 27.5 0.5 1.9 2 0 0 2 2 2 1 F-box-like RCC1_2 PF13540.6 RKO92736.1 - 0.00022 20.9 21.8 0.007 16.1 1.1 6.1 6 0 0 6 6 6 3 Regulator of chromosome condensation (RCC1) repeat UL42 PF17638.2 RKO92737.1 - 6.2 6.8 6.6 9.7 6.2 6.6 1.2 1 0 0 1 1 1 0 HCMV UL42 Catalase_C PF18011.1 RKO92738.1 - 0.15 11.7 0.0 0.28 10.8 0.0 1.4 1 0 0 1 1 1 0 C-terminal domain found in long catalases MSC PF09402.10 RKO92740.1 - 1.5e-29 103.6 0.3 1.9e-29 103.2 0.3 1.1 1 0 0 1 1 1 1 Man1-Src1p-C-terminal domain Neil1-DNA_bind PF09292.10 RKO92740.1 - 0.19 11.7 0.9 0.48 10.4 0.0 2.1 2 0 0 2 2 2 0 Endonuclease VIII-like 1, DNA bind AhpC-TSA PF00578.21 RKO92741.1 - 2e-35 121.4 0.0 2.6e-35 121.0 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 RKO92741.1 - 5.6e-15 55.3 0.0 6.6e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 RKO92741.1 - 6.8e-13 48.2 0.1 1.1e-12 47.5 0.1 1.4 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 RKO92741.1 - 0.00056 19.8 0.0 0.0011 18.8 0.0 1.4 1 0 0 1 1 1 1 SCO1/SenC Kinesin PF00225.23 RKO92742.1 - 2.1e-85 286.6 0.0 2.4e-85 286.4 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO92742.1 - 5.5e-12 45.9 0.0 8.9e-12 45.2 0.0 1.3 1 0 0 1 1 1 1 Microtubule binding PhoH PF02562.16 RKO92742.1 - 0.28 10.6 1.0 3.5 7.0 1.2 2.2 2 0 0 2 2 2 0 PhoH-like protein Acyl-CoA_dh_N PF02771.16 RKO92743.1 - 1.1e-16 61.5 0.0 2.3e-16 60.4 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain DALR_1 PF05746.15 RKO92747.1 - 7.8e-13 48.6 0.4 2.9e-12 46.8 0.4 1.9 1 1 0 1 1 1 1 DALR anticodon binding domain tRNA-synt_1d PF00750.19 RKO92747.1 - 0.0025 16.8 0.0 0.13 11.2 0.0 2.5 2 1 0 2 2 2 2 tRNA synthetases class I (R) ERCC4 PF02732.15 RKO92748.1 - 2.7e-22 79.6 0.0 4.4e-22 79.0 0.0 1.3 1 0 0 1 1 1 1 ERCC4 domain HHH_8 PF14716.6 RKO92748.1 - 0.0014 19.0 0.1 0.0042 17.4 0.1 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain ABC_membrane PF00664.23 RKO92749.1 - 3.7e-45 154.7 29.8 2.1e-27 96.5 19.1 2.7 2 1 0 2 2 2 2 ABC transporter transmembrane region ABC_tran PF00005.27 RKO92749.1 - 5.5e-20 72.3 0.0 9.8e-20 71.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 RKO92749.1 - 0.00018 21.0 0.0 0.0015 18.0 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 RKO92749.1 - 0.0014 19.2 0.0 0.0027 18.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 RKO92749.1 - 0.0018 18.2 0.0 0.0036 17.2 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase DUF87 PF01935.17 RKO92749.1 - 0.0052 16.9 0.0 0.0092 16.1 0.0 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain Dynamin_N PF00350.23 RKO92749.1 - 0.0079 16.3 0.2 0.021 14.9 0.2 1.6 1 0 0 1 1 1 1 Dynamin family AAA_29 PF13555.6 RKO92749.1 - 0.023 14.5 0.0 0.056 13.2 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 RKO92749.1 - 0.067 13.3 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_22 PF13401.6 RKO92749.1 - 0.077 13.3 0.0 0.19 12.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 RKO92749.1 - 0.081 12.0 0.0 0.15 11.1 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF1229 PF06797.11 RKO92749.1 - 0.13 12.5 2.5 0.27 11.4 0.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1229) TrwB_AAD_bind PF10412.9 RKO92749.1 - 0.14 11.0 0.0 0.27 10.1 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_21 PF13304.6 RKO92749.1 - 0.15 11.9 0.0 0.63 9.8 0.0 2.0 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system Tlr3_TMD PF17968.1 RKO92749.1 - 1.6 9.0 9.2 0.26 11.5 4.5 2.3 2 0 0 2 2 2 0 Toll-like receptor 3 trans-membrane domain Kinesin PF00225.23 RKO92752.1 - 1.3e-06 27.6 0.3 3.8e-06 26.1 0.1 1.8 2 0 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 RKO92752.1 - 0.00034 20.6 0.2 0.0039 17.1 0.1 2.3 2 0 0 2 2 2 1 Microtubule binding DUF962 PF06127.11 RKO92753.1 - 0.046 13.8 0.1 0.066 13.3 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF962) FtsH_ext PF06480.15 RKO92753.1 - 0.13 12.6 0.1 6.5 7.2 0.0 2.4 2 0 0 2 2 2 0 FtsH Extracellular Ank_4 PF13637.6 RKO92755.1 - 0.018 15.7 0.7 0.25 12.0 0.2 2.5 2 1 0 2 2 2 0 Ankyrin repeats (many copies) Gti1_Pac2 PF09729.9 RKO92756.1 - 9.3e-46 156.2 2.6 8.1e-39 133.6 0.1 2.0 1 1 1 2 2 2 2 Gti1/Pac2 family Vac14_Fig4_bd PF11916.8 RKO92757.1 - 3.1e-79 264.8 8.1 3.1e-79 264.8 8.1 1.7 2 0 0 2 2 2 1 Vacuolar protein 14 C-terminal Fig4p binding Vac14_Fab1_bd PF12755.7 RKO92757.1 - 5.4e-45 151.9 0.4 7.5e-40 135.4 0.0 3.5 3 0 0 3 3 3 2 Vacuolar 14 Fab1-binding region HEAT PF02985.22 RKO92757.1 - 2.3e-12 46.0 0.0 0.0061 16.7 0.0 5.6 5 0 0 5 5 5 3 HEAT repeat HEAT_2 PF13646.6 RKO92757.1 - 1.4e-07 31.8 2.2 0.18 12.2 0.0 4.8 5 1 0 5 5 5 2 HEAT repeats HEAT_EZ PF13513.6 RKO92757.1 - 8.7e-07 29.3 0.7 0.097 13.2 0.0 5.3 4 1 1 5 5 5 2 HEAT-like repeat Cnd1 PF12717.7 RKO92757.1 - 1.7e-05 25.0 2.5 0.89 9.6 0.3 4.4 4 0 0 4 4 4 2 non-SMC mitotic condensation complex subunit 1 RTP1_C1 PF10363.9 RKO92757.1 - 3.6e-05 23.9 0.0 0.14 12.4 0.1 3.7 3 1 0 3 3 3 2 Required for nuclear transport of RNA pol II C-terminus 1 FAM75 PF14650.6 RKO92758.1 - 0.088 12.3 0.7 0.12 11.8 0.7 1.3 1 0 0 1 1 1 0 FAM75 family RSN1_7TM PF02714.15 RKO92761.1 - 2.2e-66 224.0 13.3 2.2e-66 224.0 13.3 1.6 2 0 0 2 2 2 1 Calcium-dependent channel, 7TM region, putative phosphate RSN1_TM PF13967.6 RKO92761.1 - 1.9e-25 89.4 3.6 1.9e-25 89.4 3.6 2.5 2 0 0 2 2 2 1 Late exocytosis, associated with Golgi transport PHM7_cyt PF14703.6 RKO92761.1 - 8.5e-11 42.4 0.4 0.00018 21.8 0.3 2.9 2 1 0 2 2 2 2 Cytosolic domain of 10TM putative phosphate transporter LRR_8 PF13855.6 RKO92762.1 - 4e-15 55.3 1.4 4.7e-07 29.5 1.9 2.2 1 1 1 2 2 2 2 Leucine rich repeat LRR_4 PF12799.7 RKO92762.1 - 1e-11 44.9 3.1 3.1e-05 24.3 2.0 3.2 1 1 2 4 4 4 4 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 RKO92762.1 - 0.001 19.3 4.3 2.4 9.1 0.0 4.1 4 0 0 4 4 4 2 Leucine Rich Repeat LRR_6 PF13516.6 RKO92762.1 - 0.0084 16.1 6.7 0.69 10.1 0.1 3.6 4 0 0 4 4 4 2 Leucine Rich repeat LRR_9 PF14580.6 RKO92762.1 - 0.064 12.8 1.3 0.13 11.8 0.6 1.6 1 1 1 2 2 2 0 Leucine-rich repeat MBF1 PF08523.10 RKO92763.1 - 3.1e-20 72.4 2.8 3.1e-20 72.4 2.8 2.1 2 1 0 2 2 2 1 Multiprotein bridging factor 1 HTH_3 PF01381.22 RKO92763.1 - 7.7e-12 45.1 0.4 1.3e-11 44.3 0.4 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 RKO92763.1 - 2.1e-05 24.8 0.0 6.6e-05 23.2 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_19 PF12844.7 RKO92763.1 - 0.00017 21.5 0.4 0.00028 20.9 0.4 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 RKO92763.1 - 0.039 14.4 0.1 0.07 13.6 0.1 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.6 RKO92763.1 - 0.043 13.8 0.4 0.077 13.0 0.1 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain BAT2_N PF07001.11 RKO92763.1 - 0.056 13.9 4.9 0.68 10.4 4.9 2.0 1 1 0 1 1 1 0 BAT2 N-terminus EXS PF03124.14 RKO92766.1 - 3.8e-83 279.5 7.7 4.4e-83 279.3 7.7 1.0 1 0 0 1 1 1 1 EXS family XRN_M PF17846.1 RKO92768.1 - 1.4e-09 37.4 0.0 2.3e-05 23.6 0.0 2.1 2 0 0 2 2 2 2 Xrn1 helical domain Pkinase_Tyr PF07714.17 RKO92769.1 - 1.3e-09 37.7 0.0 1.5e-09 37.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 RKO92769.1 - 7.4e-09 35.4 0.0 8.2e-09 35.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain DUF4203 PF13886.6 RKO92772.1 - 2.7e-05 23.9 16.4 0.00011 22.0 16.4 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4203) Defensin_big PF14862.6 RKO92772.1 - 0.14 12.4 0.7 0.34 11.2 0.0 1.9 2 0 0 2 2 2 0 Big defensin MWFE PF15879.5 RKO92772.1 - 0.69 10.1 0.0 0.69 10.1 0.0 3.2 4 0 0 4 4 4 0 NADH-ubiquinone oxidoreductase MWFE subunit AT_hook PF02178.19 RKO92773.1 - 0.046 13.6 2.2 0.046 13.6 2.2 4.3 4 0 0 4 4 4 0 AT hook motif MPC PF03650.13 RKO92774.1 - 0.081 13.1 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial pyruvate carriers CDH-cyt PF16010.5 RKO92776.1 - 8.9e-09 35.3 0.5 2e-08 34.1 0.5 1.5 1 1 0 1 1 1 1 Cytochrome domain of cellobiose dehydrogenase Cytochrom_B561 PF03188.16 RKO92776.1 - 1.2e-08 35.1 4.5 3e-08 33.9 4.5 1.7 1 0 0 1 1 1 1 Eukaryotic cytochrome b561 DOMON PF03351.17 RKO92776.1 - 1.8e-07 31.4 0.0 3.1e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 DOMON domain peroxidase PF00141.23 RKO92777.1 - 9.2e-29 100.8 0.0 1.4e-28 100.2 0.0 1.2 1 0 0 1 1 1 1 Peroxidase peroxidase PF00141.23 RKO92778.1 - 2.5e-26 92.8 0.0 3.6e-26 92.3 0.0 1.2 1 0 0 1 1 1 1 Peroxidase Gene66 PF02053.15 RKO92780.1 - 0.05 13.2 0.4 0.14 11.8 0.1 1.8 2 0 0 2 2 2 0 Gene 66 (IR5) protein F-box-like PF12937.7 RKO92780.1 - 0.21 11.5 7.1 0.94 9.4 7.1 2.2 1 1 0 1 1 1 0 F-box-like DUF3295 PF11702.8 RKO92783.1 - 0.2 11.0 7.7 0.076 12.4 3.8 2.0 2 1 1 3 3 3 0 Protein of unknown function (DUF3295) CorA PF01544.18 RKO92783.1 - 0.23 10.7 0.1 0.42 9.9 0.1 1.3 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein Med19 PF10278.9 RKO92783.1 - 0.42 10.5 8.9 0.75 9.7 8.9 1.3 1 0 0 1 1 1 0 Mediator of RNA pol II transcription subunit 19 Menin PF05053.13 RKO92783.1 - 4.6 5.5 7.3 6.9 4.9 7.3 1.1 1 0 0 1 1 1 0 Menin Erv26 PF04148.13 RKO92784.1 - 3.2e-52 177.4 16.4 1.4e-51 175.3 16.4 1.8 1 1 0 1 1 1 1 Transmembrane adaptor Erv26 F-box_5 PF18511.1 RKO92784.1 - 0.041 13.5 0.4 0.091 12.4 0.0 1.8 2 0 0 2 2 2 0 F-box BBL5 PF07289.11 RKO92786.1 - 1.2e-96 323.7 0.0 1.6e-94 316.7 0.0 2.0 1 1 0 1 1 1 1 Bardet-Biedl syndrome 5 protein bPH_3 PF14470.6 RKO92786.1 - 0.12 12.8 0.0 0.27 11.6 0.0 1.6 2 0 0 2 2 2 0 Bacterial PH domain WD40 PF00400.32 RKO92787.1 - 5e-10 39.8 6.3 0.0024 18.7 1.0 5.6 6 0 0 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO92787.1 - 0.14 12.5 0.0 1.3 9.3 0.0 2.4 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain BUD22 PF09073.10 RKO92787.1 - 1.2 8.4 11.7 2.1 7.6 11.7 1.3 1 0 0 1 1 1 0 BUD22 Abhydrolase_1 PF00561.20 RKO92789.1 - 2.1e-05 24.3 0.0 2.3e-05 24.1 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold Peptidase_S15 PF02129.18 RKO92789.1 - 2.8e-05 23.8 0.0 2.8e-05 23.8 0.0 1.0 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) Hydrolase_4 PF12146.8 RKO92789.1 - 0.00063 19.1 0.1 0.00073 18.9 0.1 1.0 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 RKO92789.1 - 0.12 11.8 0.1 0.16 11.4 0.1 1.2 1 0 0 1 1 1 0 Prolyl oligopeptidase family Mpp10 PF04006.12 RKO92790.1 - 1.5e-140 469.6 54.3 1.8e-140 469.3 54.3 1.0 1 0 0 1 1 1 1 Mpp10 protein Striatin PF08232.12 RKO92791.1 - 6e-36 124.4 2.7 7.2e-36 124.1 2.7 1.1 1 0 0 1 1 1 1 Striatin family CALCOCO1 PF07888.11 RKO92791.1 - 0.058 12.3 0.7 0.072 12.0 0.7 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Ribosomal_S6 PF01250.17 RKO92792.1 - 2.1e-17 63.2 0.0 2.3e-17 63.0 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S6 RPN6_N PF18055.1 RKO92793.1 - 1.2e-40 138.5 3.6 1.2e-40 138.5 3.6 2.6 3 0 0 3 3 3 1 26S proteasome regulatory subunit RPN6 N-terminal domain PCI PF01399.27 RKO92793.1 - 8.6e-19 68.0 0.6 4.1e-18 65.8 0.1 2.4 2 1 0 2 2 2 1 PCI domain RPN6_C_helix PF18503.1 RKO92793.1 - 7e-15 54.4 2.9 2.5e-14 52.7 1.0 2.5 2 0 0 2 2 2 1 26S proteasome subunit RPN6 C-terminal helix domain nsp8 PF08717.10 RKO92793.1 - 0.042 13.7 0.7 0.11 12.3 0.7 1.7 1 0 0 1 1 1 0 nsp8 replicase DUF3288 PF11691.8 RKO92793.1 - 0.063 13.3 0.1 15 5.7 0.0 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3288) TPR_12 PF13424.6 RKO92793.1 - 0.16 12.3 14.4 2.8 8.3 0.1 4.3 3 1 1 4 4 4 0 Tetratricopeptide repeat ATG27 PF09451.10 RKO92795.1 - 0.00068 19.6 0.0 0.00073 19.5 0.0 1.1 1 0 0 1 1 1 1 Autophagy-related protein 27 GAF_2 PF13185.6 RKO92796.1 - 7.3e-05 23.1 0.1 0.00019 21.7 0.1 1.8 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 RKO92796.1 - 0.039 14.6 0.0 0.093 13.4 0.0 1.6 1 0 0 1 1 1 0 GAF domain ABC2_membrane PF01061.24 RKO92797.1 - 5.1e-36 124.1 20.8 6.9e-36 123.6 20.8 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC_tran PF00005.27 RKO92797.1 - 2.5e-17 63.6 0.0 4.4e-17 62.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 RKO92797.1 - 4.1e-07 30.1 0.2 0.0028 17.5 0.0 2.4 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC2_membrane_3 PF12698.7 RKO92797.1 - 0.00015 21.0 24.0 0.00029 20.0 23.5 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein RsgA_GTPase PF03193.16 RKO92797.1 - 0.00022 21.1 0.1 0.00048 20.1 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase SMC_N PF02463.19 RKO92797.1 - 0.0014 18.1 0.1 0.099 12.1 0.0 2.4 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 RKO92797.1 - 0.004 16.9 0.3 0.011 15.5 0.3 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 RKO92797.1 - 0.032 13.8 1.0 0.065 12.8 0.4 1.7 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.6 RKO92797.1 - 0.085 11.5 0.0 12 4.4 0.0 3.0 3 0 0 3 3 3 0 AAA domain AAA_23 PF13476.6 RKO92797.1 - 0.12 12.9 0.0 0.21 12.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 RKO92797.1 - 0.18 12.2 0.3 0.36 11.2 0.3 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_33 PF13671.6 RKO92797.1 - 0.21 11.8 0.1 0.49 10.5 0.0 1.6 2 0 0 2 2 2 0 AAA domain PDR_CDR PF06422.12 RKO92797.1 - 6.3 6.8 8.3 0.55 10.2 0.8 2.8 3 0 0 3 3 3 0 CDR ABC transporter Pkinase PF00069.25 RKO92798.1 - 7.1e-18 64.9 0.0 1.4e-17 64.0 0.0 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO92798.1 - 0.0001 21.7 0.0 0.00013 21.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase She2p PF11435.8 RKO92798.1 - 0.12 12.0 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 RNA binding protein She2p SWIRM PF04433.17 RKO92799.1 - 1e-27 96.3 0.1 1.8e-27 95.5 0.1 1.4 1 0 0 1 1 1 1 SWIRM domain SWIRM-assoc_1 PF16495.5 RKO92799.1 - 1.6e-26 92.1 9.5 2.6e-26 91.4 9.5 1.3 1 0 0 1 1 1 1 SWIRM-associated region 1 Myb_DNA-binding PF00249.31 RKO92799.1 - 3.8e-11 43.0 0.0 8.8e-11 41.8 0.0 1.7 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO92799.1 - 1.6e-07 31.5 0.0 4.4e-07 30.0 0.0 1.8 2 0 0 2 2 2 1 Myb-like DNA-binding domain ZZ PF00569.17 RKO92799.1 - 0.0015 18.3 3.3 0.0025 17.6 3.3 1.3 1 0 0 1 1 1 1 Zinc finger, ZZ type DUF737 PF05300.11 RKO92799.1 - 0.026 14.9 0.0 0.031 14.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF737) Myb_DNA-bind_7 PF15963.5 RKO92799.1 - 0.048 13.5 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 Myb DNA-binding like SANT_DAMP1_like PF16282.5 RKO92799.1 - 0.13 12.5 0.0 0.24 11.6 0.0 1.4 1 0 0 1 1 1 0 SANT/Myb-like domain of DAMP1 Zn_ribbon_2 PF12674.7 RKO92799.1 - 0.36 11.5 1.4 0.38 11.5 0.2 1.6 2 0 0 2 2 2 0 Putative zinc ribbon domain Pkinase PF00069.25 RKO92800.1 - 2.8e-18 66.2 0.0 3.5e-18 65.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO92800.1 - 3.8e-08 32.9 0.0 5e-08 32.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase RRT14 PF17075.5 RKO92800.1 - 0.011 15.9 0.1 0.015 15.4 0.1 1.1 1 0 0 1 1 1 0 Regular of rDNA transcription protein 14 Glyoxal_oxid_N PF07250.11 RKO92801.1 - 2.6e-31 108.7 0.1 2.4e-30 105.5 0.1 2.5 2 1 0 2 2 2 1 Glyoxal oxidase N-terminus DUF1929 PF09118.11 RKO92801.1 - 1e-11 45.0 1.1 2.1e-11 43.9 1.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1929) Kelch_4 PF13418.6 RKO92801.1 - 1.5e-05 24.9 0.8 0.27 11.3 0.0 4.4 4 1 1 5 5 5 2 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO92801.1 - 8.6e-05 22.7 0.2 2.3 8.6 0.0 4.8 4 1 1 5 5 5 1 Kelch motif Kelch_5 PF13854.6 RKO92801.1 - 0.089 12.8 0.0 0.69 10.0 0.0 2.4 2 0 0 2 2 2 0 Kelch motif DUF1218 PF06749.12 RKO92802.1 - 0.16 12.5 4.0 0.2 12.2 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1218) Phage_holin_5_2 PF16079.5 RKO92802.1 - 3.6 8.0 7.5 1.6 9.1 3.8 2.0 2 0 0 2 2 2 0 Phage holin family Hol44, in holin superfamily V DUF2207 PF09972.9 RKO92802.1 - 3.7 6.2 4.6 8.5 5.0 0.1 2.0 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) NT-C2 PF10358.9 RKO92804.1 - 2.3e-08 33.9 0.0 2.9e-08 33.6 0.0 1.1 1 0 0 1 1 1 1 N-terminal C2 in EEIG1 and EHBP1 proteins MFS_5 PF05631.14 RKO92805.1 - 6.1e-13 48.4 0.2 7.7e-13 48.1 0.2 1.0 1 0 0 1 1 1 1 Sugar-tranasporters, 12 TM Septin PF00735.18 RKO92814.1 - 2.2e-84 283.1 0.2 2.6e-84 282.8 0.2 1.0 1 0 0 1 1 1 1 Septin GTP_EFTU PF00009.27 RKO92814.1 - 0.058 12.9 0.1 4.3 6.8 0.0 2.1 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain Septin PF00735.18 RKO92815.1 - 0.0053 16.1 0.2 0.0053 16.1 0.2 1.7 2 1 0 2 2 2 1 Septin DUF2968 PF11180.8 RKO92815.1 - 0.008 15.8 6.7 0.0087 15.7 6.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2968) FOXP-CC PF16159.5 RKO92815.1 - 0.022 15.4 2.0 0.022 15.4 2.0 2.4 2 1 1 3 3 3 0 FOXP coiled-coil domain Vault_4 PF17796.1 RKO92815.1 - 0.24 11.5 2.7 2.7 8.1 0.4 2.4 2 1 0 2 2 2 0 Major Vault Protein repeat domain Myc-LZ PF02344.15 RKO92815.1 - 0.55 10.4 7.2 1.9 8.7 0.8 2.6 2 0 0 2 2 2 0 Myc leucine zipper domain 14-3-3 PF00244.20 RKO92816.1 - 1.7e-106 354.7 2.9 1.9e-106 354.6 2.9 1.0 1 0 0 1 1 1 1 14-3-3 protein Tubulin PF00091.25 RKO92817.1 - 1.9e-69 233.8 0.0 3.8e-69 232.9 0.0 1.5 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 RKO92817.1 - 1.8e-43 147.7 0.1 2.8e-43 147.1 0.1 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 RKO92817.1 - 1.3e-05 25.5 0.0 3.3e-05 24.2 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 RKO92817.1 - 0.0011 18.7 0.0 0.0022 17.7 0.0 1.5 1 0 0 1 1 1 1 Tubulin domain Tubulin_2 PF13809.6 RKO92817.1 - 0.018 14.3 0.0 0.055 12.6 0.0 1.7 2 0 0 2 2 2 0 Tubulin like 7tm_1 PF00001.21 RKO92818.1 - 5.1e-12 45.7 0.2 7.6e-12 45.1 0.2 1.2 1 0 0 1 1 1 1 7 transmembrane receptor (rhodopsin family) Tap-RNA_bind PF09162.10 RKO92822.1 - 0.068 13.0 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Tap, RNA-binding DUF647 PF04884.14 RKO92823.1 - 3.6e-68 229.8 0.5 5.3e-68 229.2 0.5 1.2 1 0 0 1 1 1 1 Vitamin B6 photo-protection and homoeostasis RAMP4 PF06624.12 RKO92824.1 - 2.1e-08 34.1 0.3 1.7e-07 31.2 0.1 2.2 1 1 1 2 2 2 1 Ribosome associated membrane protein RAMP4 DUF1206 PF06724.11 RKO92824.1 - 0.096 12.8 1.0 0.2 11.7 0.0 2.1 3 0 0 3 3 3 0 Domain of Unknown Function (DUF1206) Peripla_BP_6 PF13458.6 RKO92826.1 - 2.2e-13 50.6 1.8 2e-08 34.3 0.7 2.2 2 0 0 2 2 2 2 Periplasmic binding protein ANF_receptor PF01094.28 RKO92826.1 - 3.8e-08 32.8 0.1 5.6e-08 32.3 0.1 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_6 PF13458.6 RKO92827.1 - 0.017 14.8 0.1 0.049 13.3 0.0 1.7 2 0 0 2 2 2 0 Periplasmic binding protein Cyto_heme_lyase PF01265.17 RKO92828.1 - 2e-72 244.2 4.2 2.4e-71 240.7 4.2 1.9 1 1 0 1 1 1 1 Cytochrome c/c1 heme lyase TRAPP PF04051.16 RKO92829.1 - 6.3e-37 126.5 0.0 7.4e-37 126.3 0.0 1.0 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component Utp12 PF04003.12 RKO92830.1 - 3.2e-19 69.2 2.0 5.7e-19 68.4 2.0 1.4 1 0 0 1 1 1 1 Dip2/Utp12 Family WD40 PF00400.32 RKO92830.1 - 7.5e-13 48.7 9.5 6.7e-05 23.6 0.3 5.9 6 0 0 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO92830.1 - 2.6e-06 27.6 0.0 0.0016 18.7 0.0 3.8 2 1 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain PQQ_2 PF13360.6 RKO92830.1 - 0.025 14.1 4.5 0.64 9.5 0.6 3.5 2 1 1 3 3 3 0 PQQ-like domain Peptidase_M17_N PF02789.17 RKO92830.1 - 0.083 12.8 0.1 2.2 8.2 0.0 2.5 2 0 0 2 2 2 0 Cytosol aminopeptidase family, N-terminal domain Hira PF07569.11 RKO92830.1 - 0.15 11.8 0.3 2.1 8.0 0.0 2.6 3 0 0 3 3 3 0 TUP1-like enhancer of split RhoGEF PF00621.20 RKO92831.1 - 2.4e-29 102.8 2.1 2.7e-29 102.7 0.4 1.8 2 0 0 2 2 2 1 RhoGEF domain PH_10 PF15411.6 RKO92831.1 - 2.2e-27 95.8 0.9 4.9e-27 94.6 0.9 1.6 1 0 0 1 1 1 1 Pleckstrin homology domain Kdo PF06293.14 RKO92832.1 - 0.00023 20.6 0.0 0.00052 19.4 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 RKO92832.1 - 0.00059 19.3 0.0 0.0029 17.0 0.0 1.9 1 1 0 1 1 1 1 Protein kinase domain HTH_33 PF13592.6 RKO92832.1 - 0.0035 17.0 0.3 0.16 11.7 0.0 2.6 2 0 0 2 2 2 1 Winged helix-turn helix APH PF01636.23 RKO92832.1 - 0.0099 15.8 0.0 0.031 14.2 0.0 1.8 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 RKO92832.1 - 0.035 12.9 0.0 0.06 12.1 0.0 1.3 1 0 0 1 1 1 0 Fungal protein kinase Aminotran_1_2 PF00155.21 RKO92833.1 - 1.5e-61 208.6 0.0 1.7e-61 208.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 RKO92833.1 - 1.9e-05 24.2 0.1 3.1e-05 23.4 0.1 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 RKO92833.1 - 0.00062 18.4 0.0 0.0011 17.5 0.0 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 RKO92833.1 - 0.00095 18.5 0.0 0.0014 18.0 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 RKO92833.1 - 0.051 12.5 0.0 0.1 11.5 0.0 1.4 1 1 0 1 1 1 0 Aminotransferase class-V DUF1539 PF07560.11 RKO92835.1 - 0.062 13.4 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1539) Conotoxin PF02950.17 RKO92836.1 - 0.21 12.6 2.1 0.56 11.3 2.1 1.7 1 0 0 1 1 1 0 Conotoxin Nop14 PF04147.12 RKO92836.1 - 3.8 5.6 19.6 4.5 5.4 19.6 1.1 1 0 0 1 1 1 0 Nop14-like family F-box-like PF12937.7 RKO92838.1 - 5.1e-09 35.9 0.4 1.4e-08 34.5 0.4 1.8 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO92838.1 - 0.006 16.4 0.2 1.6 8.7 0.1 2.6 2 0 0 2 2 2 2 F-box domain MFS_1 PF07690.16 RKO92839.1 - 1.9e-25 89.5 46.6 5.9e-18 64.9 15.8 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO92839.1 - 1.3e-09 37.5 12.3 6e-07 28.7 1.2 2.2 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.13 RKO92839.1 - 0.0017 16.8 8.6 0.0019 16.7 0.2 2.7 2 1 1 3 3 3 2 Transmembrane secretion effector MFS_1_like PF12832.7 RKO92839.1 - 0.0052 15.7 0.1 0.01 14.8 0.1 1.5 1 0 0 1 1 1 1 MFS_1 like family Sporozoite_P67 PF05642.11 RKO92839.1 - 0.012 13.8 2.5 0.018 13.2 2.5 1.2 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Ku_PK_bind PF08785.11 RKO92843.1 - 7.6e-23 80.9 0.0 3e-22 79.0 0.0 2.0 2 0 0 2 2 2 1 Ku C terminal domain like Ku PF02735.16 RKO92843.1 - 1.2e-17 64.3 0.0 2.2e-17 63.4 0.0 1.4 1 0 0 1 1 1 1 Ku70/Ku80 beta-barrel domain Ku_C PF03730.14 RKO92843.1 - 3e-07 31.0 0.1 8.3e-07 29.6 0.1 1.8 1 0 0 1 1 1 1 Ku70/Ku80 C-terminal arm Ku_N PF03731.15 RKO92843.1 - 0.00023 21.0 0.0 0.00047 20.0 0.0 1.4 1 0 0 1 1 1 1 Ku70/Ku80 N-terminal alpha/beta domain Sacchrp_dh_NADP PF03435.18 RKO92844.1 - 0.00066 19.9 0.0 0.00067 19.9 0.0 1.1 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Semialdhyde_dh PF01118.24 RKO92844.1 - 0.017 15.5 0.0 0.02 15.4 0.0 1.1 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_10 PF13460.6 RKO92844.1 - 0.053 13.4 0.2 0.056 13.3 0.2 1.1 1 0 0 1 1 1 0 NAD(P)H-binding KR PF08659.10 RKO92844.1 - 0.075 12.9 0.1 0.095 12.6 0.1 1.1 1 0 0 1 1 1 0 KR domain Macoilin PF09726.9 RKO92845.1 - 2.6 6.5 26.8 3.8 5.9 26.8 1.1 1 0 0 1 1 1 0 Macoilin family API5 PF05918.11 RKO92845.1 - 7 5.3 7.8 10 4.8 7.8 1.2 1 0 0 1 1 1 0 Apoptosis inhibitory protein 5 (API5) XPG_I PF00867.18 RKO92846.1 - 6.8e-24 84.0 0.0 1.7e-23 82.7 0.0 1.7 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 RKO92846.1 - 9.8e-07 29.2 0.0 0.00012 22.5 0.0 2.6 2 0 0 2 2 2 1 XPG N-terminal domain GEN1_C PF18380.1 RKO92846.1 - 0.059 14.3 0.4 0.26 12.2 0.4 2.1 1 0 0 1 1 1 0 Holliday junction resolvase Gen1 C-terminal domain ResIII PF04851.15 RKO92847.1 - 1.2e-21 77.5 0.0 3.5e-21 76.0 0.0 1.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 RKO92847.1 - 1.8e-16 60.4 0.0 3.2e-16 59.6 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase SWI2_SNF2 PF18766.1 RKO92847.1 - 4.9e-05 23.1 0.0 9.8e-05 22.1 0.0 1.5 1 0 0 1 1 1 1 SWI2/SNF2 ATPase PX PF00787.24 RKO92848.1 - 6.9e-18 64.7 0.0 1.4e-17 63.6 0.0 1.5 1 0 0 1 1 1 1 PX domain Vps5 PF09325.10 RKO92848.1 - 1.1e-08 34.9 3.6 1.3e-05 24.9 1.1 2.1 2 0 0 2 2 2 2 Vps5 C terminal like MIF4G_like_2 PF09090.11 RKO92848.1 - 0.064 12.7 1.2 0.13 11.7 1.2 1.5 1 0 0 1 1 1 0 MIF4G like Proteasome PF00227.26 RKO92850.1 - 1.3e-62 210.7 0.1 1.7e-62 210.3 0.1 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 RKO92850.1 - 1.3e-10 40.8 0.1 4.9e-10 38.9 0.1 2.0 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature Ham1p_like PF01725.16 RKO92851.1 - 1.4e-55 188.2 0.0 1.5e-55 188.0 0.0 1.0 1 0 0 1 1 1 1 Ham1 family ABC_membrane PF00664.23 RKO92852.1 - 7.5e-63 212.7 21.6 7.4e-35 120.9 8.3 2.7 2 2 0 2 2 2 2 ABC transporter transmembrane region ABC_tran PF00005.27 RKO92852.1 - 1.6e-44 151.8 0.0 2.1e-27 96.3 0.0 2.5 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 RKO92852.1 - 1.5e-08 34.4 0.0 0.01 15.3 0.0 3.7 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 RKO92852.1 - 5.6e-05 22.8 1.0 0.11 12.3 0.1 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.6 RKO92852.1 - 0.00014 21.8 0.8 4.4 7.0 0.0 3.7 4 0 0 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system T2SSE PF00437.20 RKO92852.1 - 0.00025 20.2 0.2 0.14 11.2 0.2 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_16 PF13191.6 RKO92852.1 - 0.00027 21.4 1.3 0.32 11.4 0.0 2.8 2 1 0 2 2 2 2 AAA ATPase domain MMR_HSR1 PF01926.23 RKO92852.1 - 0.00045 20.3 1.0 0.89 9.7 0.2 2.6 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_23 PF13476.6 RKO92852.1 - 0.00057 20.4 0.3 0.077 13.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 RKO92852.1 - 0.00076 19.1 0.5 0.11 12.0 0.2 2.5 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 RKO92852.1 - 0.013 15.5 0.1 3.2 7.6 0.0 2.3 2 0 0 2 2 2 0 RsgA GTPase Zeta_toxin PF06414.12 RKO92852.1 - 0.018 14.3 3.2 0.6 9.3 0.5 2.6 2 0 0 2 2 2 0 Zeta toxin AAA_22 PF13401.6 RKO92852.1 - 0.019 15.3 2.5 13 6.0 0.1 3.6 3 0 0 3 3 3 0 AAA domain AAA_24 PF13479.6 RKO92852.1 - 0.023 14.4 0.4 0.4 10.4 0.0 2.5 2 1 0 2 2 2 0 AAA domain DEAD PF00270.29 RKO92852.1 - 0.025 14.4 0.3 4.6 7.0 0.0 3.1 3 0 0 3 3 3 0 DEAD/DEAH box helicase DUF87 PF01935.17 RKO92852.1 - 0.037 14.1 1.6 2.9 7.9 0.1 2.4 2 0 0 2 2 2 0 Helicase HerA, central domain BCA_ABC_TP_C PF12399.8 RKO92852.1 - 0.065 13.2 0.3 0.16 12.0 0.3 1.7 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter FtsK_SpoIIIE PF01580.18 RKO92852.1 - 0.066 12.5 0.3 2.2 7.6 0.1 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family ResIII PF04851.15 RKO92852.1 - 0.17 11.9 0.1 3.5 7.6 0.0 2.5 3 0 0 3 3 2 0 Type III restriction enzyme, res subunit AAA PF00004.29 RKO92852.1 - 0.22 12.0 1.0 4.8 7.6 0.1 2.9 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) ATP_bind_1 PF03029.17 RKO92852.1 - 0.53 10.0 1.5 53 3.5 0.0 3.1 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein DUF1289 PF06945.13 RKO92854.1 - 0.079 12.8 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) LRR_8 PF13855.6 RKO92855.1 - 0.00024 20.8 0.1 0.024 14.4 0.0 3.3 3 1 0 3 3 3 1 Leucine rich repeat Peptidase_S8 PF00082.22 RKO92857.1 - 1.7e-56 191.7 0.3 2.5e-56 191.1 0.3 1.2 1 0 0 1 1 1 1 Subtilase family PA PF02225.22 RKO92857.1 - 0.00076 19.5 0.0 0.0026 17.8 0.0 1.9 1 0 0 1 1 1 1 PA domain LIM PF00412.22 RKO92858.1 - 3.2e-44 149.0 39.2 6e-16 58.4 2.8 5.0 5 0 0 5 5 5 5 LIM domain C2 PF00168.30 RKO92860.1 - 8.3e-15 55.0 0.0 1.5e-14 54.1 0.0 1.4 1 0 0 1 1 1 1 C2 domain DUF1041 PF06292.17 RKO92860.1 - 0.042 14.2 0.1 0.096 13.1 0.1 1.6 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1041) DUF515 PF04415.12 RKO92862.1 - 0.73 8.2 2.5 1.1 7.6 2.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF515) DPBB_1 PF03330.18 RKO92863.1 - 0.00038 20.7 0.1 0.00053 20.2 0.1 1.3 1 0 0 1 1 1 1 Lytic transglycolase BAF1_ABF1 PF04684.13 RKO92864.1 - 0.19 10.8 8.1 0.29 10.1 8.1 1.4 1 0 0 1 1 1 0 BAF1 / ABF1 chromatin reorganising factor PrpF PF04303.13 RKO92864.1 - 0.23 10.4 2.9 0.34 9.8 2.9 1.1 1 0 0 1 1 1 0 PrpF protein Cyclin PF08613.11 RKO92866.1 - 2.8e-32 112.3 0.0 3.5e-32 112.0 0.0 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 RKO92866.1 - 0.0021 17.8 0.1 0.0028 17.4 0.1 1.2 1 0 0 1 1 1 1 Cyclin, N-terminal domain HTH_Crp_2 PF13545.6 RKO92867.1 - 2.6e-05 24.1 0.9 1 9.4 0.1 3.5 1 1 2 3 3 3 3 Crp-like helix-turn-helix domain Antigen_Bd37 PF11641.8 RKO92867.1 - 0.0051 16.3 0.2 0.0074 15.8 0.2 1.3 1 0 0 1 1 1 1 Glycosylphosphatidylinositol-anchored merozoite surface protein DUF1989 PF09347.10 RKO92867.1 - 0.033 13.8 0.7 0.048 13.3 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1989) CCDC144C PF14915.6 RKO92867.1 - 0.12 11.4 6.8 0.82 8.7 0.1 2.1 1 1 1 2 2 2 0 CCDC144C protein coiled-coil region MarR_2 PF12802.7 RKO92867.1 - 0.14 12.1 4.6 4.2 7.3 0.3 3.7 1 1 2 3 3 3 0 MarR family DprA_WH PF17782.1 RKO92867.1 - 0.21 11.7 7.0 2.1 8.5 1.0 2.8 1 1 1 2 2 2 0 DprA winged helix domain HTH_47 PF16221.5 RKO92867.1 - 0.69 9.5 3.0 28 4.3 0.0 3.7 4 0 0 4 4 4 0 winged helix-turn-helix SPATA24 PF15175.6 RKO92867.1 - 1.5 8.7 5.3 2.6 7.9 1.9 2.4 2 1 1 3 3 3 0 Spermatogenesis-associated protein 24 RRM_1 PF00076.22 RKO92868.1 - 0.0017 18.1 0.1 16 5.4 0.0 5.2 6 0 0 6 6 6 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FMN_red PF03358.15 RKO92869.1 - 7.3e-29 100.5 0.0 1.2e-28 99.8 0.0 1.3 1 1 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 RKO92869.1 - 4.9e-11 42.7 0.0 6.3e-11 42.4 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold IF3_N PF05198.16 RKO92870.1 - 2.4e-07 30.9 0.0 5.8e-07 29.7 0.0 1.7 2 0 0 2 2 2 1 Translation initiation factor IF-3, N-terminal domain IF3_C PF00707.22 RKO92870.1 - 4.6e-07 29.7 0.7 9.7e-07 28.7 0.7 1.6 1 1 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain INCENP_ARK-bind PF03941.15 RKO92872.1 - 9e-07 28.7 0.0 9e-07 28.7 0.0 3.8 5 0 0 5 5 5 1 Inner centromere protein, ARK binding region Med26 PF08711.11 RKO92872.1 - 0.068 13.2 0.1 0.27 11.3 0.1 2.1 1 0 0 1 1 1 0 TFIIS helical bundle-like domain Bac_small_YrzI PF09501.10 RKO92873.1 - 8.1 6.7 7.0 40 4.4 0.1 3.6 3 0 0 3 3 3 0 Probable sporulation protein (Bac_small_yrzI) zf-C2H2 PF00096.26 RKO92874.1 - 1.4e-14 53.6 5.5 6.3e-07 29.5 1.3 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO92874.1 - 3.4e-09 36.8 6.6 6.3e-05 23.5 0.9 2.1 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO92874.1 - 4.7e-07 29.9 7.5 0.00055 20.2 0.1 3.1 3 0 0 3 3 3 2 Zinc-finger double domain zf-C2H2_jaz PF12171.8 RKO92874.1 - 0.00017 21.8 0.2 0.0013 19.0 0.0 2.1 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 RKO92874.1 - 0.00027 21.2 0.9 0.0018 18.6 0.2 2.2 2 0 0 2 2 2 1 Zinc-finger of C2H2 type zf-C2H2_6 PF13912.6 RKO92874.1 - 0.0014 18.6 0.3 0.0014 18.6 0.3 2.3 2 1 0 2 2 2 1 C2H2-type zinc finger zf-Di19 PF05605.12 RKO92874.1 - 0.0088 16.3 0.4 0.011 16.0 0.4 1.2 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-BED PF02892.15 RKO92874.1 - 0.0091 16.0 2.2 1.5 8.9 0.3 2.2 2 0 0 2 2 2 2 BED zinc finger zf-H2C2_5 PF13909.6 RKO92874.1 - 0.01 15.6 5.5 0.28 11.0 1.4 2.7 2 1 0 2 2 2 0 C2H2-type zinc-finger domain Sina PF03145.16 RKO92874.1 - 0.024 14.6 1.0 0.028 14.4 1.0 1.0 1 0 0 1 1 1 0 Seven in absentia protein family zf_UBZ PF18439.1 RKO92874.1 - 0.029 14.0 0.1 0.058 13.0 0.1 1.6 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger Zn_ribbon_SprT PF17283.2 RKO92874.1 - 0.053 13.4 1.8 0.053 13.4 1.8 1.8 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-C2HC_2 PF13913.6 RKO92874.1 - 0.056 13.4 5.6 0.061 13.2 0.4 2.5 3 0 0 3 3 3 0 zinc-finger of a C2HC-type zf-C2H2_11 PF16622.5 RKO92874.1 - 0.2 11.5 3.3 4.9 7.0 0.2 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type Pkinase PF00069.25 RKO92876.1 - 2.4e-76 256.6 0.1 2.7e-76 256.4 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO92876.1 - 2e-42 145.3 0.0 2.3e-42 145.1 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO92876.1 - 2.1e-07 30.5 0.2 9.3e-07 28.4 0.2 1.9 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 RKO92876.1 - 4.5e-07 30.0 0.4 0.00036 20.5 0.1 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 RKO92876.1 - 5.6e-05 22.8 0.4 0.00012 21.8 0.4 1.5 1 0 0 1 1 1 1 RIO1 family Haspin_kinase PF12330.8 RKO92876.1 - 0.00024 20.2 0.8 0.00036 19.6 0.8 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Choline_kinase PF01633.20 RKO92876.1 - 0.018 14.7 0.6 0.034 13.7 0.3 1.6 1 1 1 2 2 2 0 Choline/ethanolamine kinase Seadorna_VP7 PF07387.11 RKO92876.1 - 0.045 12.8 0.0 0.1 11.6 0.0 1.5 1 0 0 1 1 1 0 Seadornavirus VP7 FTA2 PF13095.6 RKO92876.1 - 0.11 12.1 0.1 0.16 11.6 0.1 1.4 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Glyco_transf_20 PF00982.21 RKO92877.1 - 8.6e-196 651.2 0.0 1e-195 651.0 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 20 Trehalose_PPase PF02358.16 RKO92877.1 - 8e-23 80.8 0.0 1.7e-22 79.7 0.0 1.6 1 1 0 1 1 1 1 Trehalose-phosphatase Glyco_transf_5 PF08323.11 RKO92877.1 - 0.0016 18.1 0.1 0.0042 16.8 0.1 1.7 1 0 0 1 1 1 1 Starch synthase catalytic domain Hydrolase_3 PF08282.12 RKO92877.1 - 0.013 15.3 0.0 0.025 14.3 0.0 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase HAD_SAK_2 PF18143.1 RKO92877.1 - 0.091 13.1 0.0 0.2 12.0 0.0 1.6 1 0 0 1 1 1 0 HAD domain in Swiss Army Knife RNA repair proteins DEAD PF00270.29 RKO92878.1 - 2.7e-49 167.3 0.0 5.5e-49 166.3 0.0 1.5 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO92878.1 - 3.6e-30 104.6 0.1 1.3e-29 102.7 0.1 2.0 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO92878.1 - 2.3e-05 24.5 0.0 4e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 RKO92878.1 - 0.022 15.1 0.0 2.7 8.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain DUF4281 PF14108.6 RKO92879.1 - 5.6e-07 30.0 0.2 9.7e-07 29.2 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4281) UBA PF00627.31 RKO92880.1 - 2.4e-05 24.1 0.5 0.0046 16.8 0.0 3.0 3 0 0 3 3 3 2 UBA/TS-N domain rve PF00665.26 RKO92881.1 - 0.0015 18.7 0.0 0.002 18.3 0.0 1.2 1 0 0 1 1 1 1 Integrase core domain gag_pre-integrs PF13976.6 RKO92881.1 - 0.19 11.6 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 GAG-pre-integrase domain ADH_zinc_N_2 PF13602.6 RKO92883.1 - 5.5e-09 37.2 0.0 1.1e-08 36.2 0.0 1.5 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N PF00107.26 RKO92883.1 - 9.8e-06 25.6 0.0 1.5e-05 25.0 0.0 1.4 1 1 0 1 1 1 1 Zinc-binding dehydrogenase TrkA_N PF02254.18 RKO92883.1 - 0.042 14.1 0.0 0.068 13.4 0.0 1.3 1 0 0 1 1 1 0 TrkA-N domain WD40 PF00400.32 RKO92884.1 - 1.1e-43 146.4 14.9 4.8e-08 33.5 0.4 7.2 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO92884.1 - 1.1e-06 28.9 0.3 0.019 15.2 0.0 4.1 2 1 3 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO92884.1 - 2.2e-05 23.3 1.2 0.086 11.5 0.1 3.5 2 2 2 4 4 4 2 Nucleoporin Nup120/160 Nucleoporin_N PF08801.11 RKO92884.1 - 0.005 15.6 0.2 6 5.5 0.0 4.0 1 1 2 4 4 4 2 Nup133 N terminal like MMS1_N PF10433.9 RKO92884.1 - 0.05 12.2 0.0 1.5 7.3 0.0 2.6 3 0 0 3 3 3 0 Mono-functional DNA-alkylating methyl methanesulfonate N-term WD40_like PF17005.5 RKO92884.1 - 0.1 11.9 0.0 0.39 10.0 0.0 1.9 1 1 1 2 2 2 0 WD40-like domain W_rich_C PF07483.11 RKO92884.1 - 0.13 12.4 1.4 1.1 9.5 0.1 2.9 3 1 1 4 4 4 0 Tryptophan-rich Synechocystis species C-terminal domain ABC1 PF03109.16 RKO92885.1 - 1.5e-33 115.5 0.0 2.3e-33 114.9 0.0 1.3 1 0 0 1 1 1 1 ABC1 family Pkinase PF00069.25 RKO92885.1 - 0.22 10.8 0.0 0.52 9.6 0.0 1.6 2 0 0 2 2 2 0 Protein kinase domain ABC_tran PF00005.27 RKO92888.1 - 1.1e-18 68.0 0.0 1.7e-18 67.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC2_membrane PF01061.24 RKO92888.1 - 2.3e-09 37.0 14.1 2.3e-09 37.0 14.1 1.9 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 RKO92888.1 - 0.00018 20.8 12.2 0.00018 20.8 12.2 2.0 2 0 0 2 2 2 1 ABC-2 family transporter protein RsgA_GTPase PF03193.16 RKO92888.1 - 0.045 13.6 0.1 0.092 12.7 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 RKO92889.1 - 2.6e-05 24.6 0.0 0.00092 19.6 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 RKO92889.1 - 0.13 12.1 0.9 0.24 11.2 0.1 1.8 2 0 0 2 2 2 0 AAA+ lid domain DUF1134 PF06577.12 RKO92890.1 - 0.063 13.0 0.1 2.5 7.9 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1134) Vps4_C PF09336.10 RKO92891.1 - 0.12 12.4 0.1 0.22 11.5 0.1 1.4 1 0 0 1 1 1 0 Vps4 C terminal oligomerisation domain TALPID3 PF15324.6 RKO92892.1 - 0.12 10.1 0.7 0.14 9.8 0.7 1.1 1 0 0 1 1 1 0 Hedgehog signalling target Cas_Csy1 PF09611.10 RKO92892.1 - 0.27 10.2 0.0 0.49 9.4 0.0 1.4 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy1) Peptidase_S9 PF00326.21 RKO92894.1 - 4.4e-10 39.4 0.0 7.9e-10 38.6 0.0 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family Peptidase_S9_N PF02897.15 RKO92894.1 - 4.6e-05 22.4 0.0 8.5e-05 21.5 0.0 1.4 1 1 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Peptidase_S15 PF02129.18 RKO92894.1 - 0.00089 18.9 0.0 0.0016 18.1 0.0 1.3 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) SCAPER_N PF16501.5 RKO92894.1 - 0.04 13.9 0.0 7.4 6.7 0.0 2.4 2 0 0 2 2 2 0 S phase cyclin A-associated protein in the endoplasmic reticulum COesterase PF00135.28 RKO92894.1 - 0.14 11.0 0.0 0.18 10.6 0.0 1.1 1 0 0 1 1 1 0 Carboxylesterase family Nop53 PF07767.11 RKO92902.1 - 6.4e-30 104.8 17.1 8.5e-30 104.4 17.1 1.2 1 0 0 1 1 1 1 Nop53 (60S ribosomal biogenesis) tRNA_lig_CPD PF08302.11 RKO92902.1 - 0.072 12.5 1.1 0.11 11.9 1.1 1.3 1 0 0 1 1 1 0 Fungal tRNA ligase phosphodiesterase domain CDC45 PF02724.14 RKO92902.1 - 0.13 10.5 9.3 0.17 10.2 9.3 1.1 1 0 0 1 1 1 0 CDC45-like protein rRNA_processing PF08524.11 RKO92902.1 - 1.9 8.5 17.0 5.2 7.1 5.2 2.3 2 0 0 2 2 2 0 rRNA processing DUF1764 PF08576.10 RKO92902.1 - 5.2 8.0 8.6 4.4 8.3 2.0 2.4 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF1764) U3_snoRNA_assoc PF08297.11 RKO92902.1 - 5.7 7.7 11.2 2.9 8.7 3.9 2.7 2 0 0 2 2 2 0 U3 snoRNA associated Glycos_transf_2 PF00535.26 RKO92903.1 - 7.6e-24 84.4 0.0 1.5e-23 83.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 RKO92903.1 - 9.6e-13 48.2 0.5 9.6e-12 44.9 0.5 2.2 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 RKO92903.1 - 6.7e-08 32.7 0.0 1.4e-07 31.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_4_4 PF13579.6 RKO92903.1 - 1.9e-07 31.7 0.0 4.3e-07 30.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain GPS PF01825.21 RKO92903.1 - 3e-05 24.5 4.5 9.5e-05 22.9 4.5 2.0 1 0 0 1 1 1 1 GPCR proteolysis site, GPS, motif Glyco_transf_4 PF13439.6 RKO92903.1 - 0.0049 16.9 0.0 0.0093 16.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 RKO92903.1 - 0.047 13.2 0.0 0.52 9.8 0.0 2.3 2 0 0 2 2 2 0 Glycosyl transferases group 1 Chitin_synth_2 PF03142.15 RKO92904.1 - 4.3e-190 632.8 0.0 5.1e-190 632.6 0.0 1.0 1 0 0 1 1 1 1 Chitin synthase Glyco_tranf_2_3 PF13641.6 RKO92904.1 - 9.8e-16 58.3 0.0 2.7e-12 47.1 0.0 2.4 2 1 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 RKO92904.1 - 1e-12 48.4 0.0 2.1e-12 47.4 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 RKO92904.1 - 3.1e-07 30.0 0.0 0.00012 21.6 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 21 Glycos_transf_2 PF00535.26 RKO92904.1 - 2.8e-06 27.2 0.1 0.074 12.9 0.0 2.8 3 0 0 3 3 3 2 Glycosyl transferase family 2 NAD_kinase PF01513.21 RKO92906.1 - 5.7e-68 229.2 0.0 7.4e-68 228.9 0.0 1.1 1 0 0 1 1 1 1 ATP-NAD kinase TPALS PF18178.1 RKO92906.1 - 0.0034 16.9 0.0 0.0058 16.1 0.0 1.3 1 0 0 1 1 1 1 TIR- and PNP-associating SLOG family DAGK_cat PF00781.24 RKO92906.1 - 0.041 13.5 0.0 0.098 12.3 0.0 1.6 2 0 0 2 2 2 0 Diacylglycerol kinase catalytic domain Spore_YhcN_YlaJ PF09580.10 RKO92907.1 - 0.82 9.7 10.6 3.6 7.7 10.7 2.1 1 1 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) E1-N PF14463.6 RKO92910.1 - 0.062 13.1 0.1 0.086 12.7 0.1 1.3 1 1 0 1 1 1 0 E1 N-terminal domain MASE2 PF05230.11 RKO92911.1 - 0.083 13.0 0.3 0.28 11.3 0.1 1.8 1 1 1 2 2 2 0 MASE2 domain PhoLip_ATPase_N PF16209.5 RKO92915.1 - 2.7e-18 65.4 0.8 2.7e-18 65.4 0.8 1.6 2 0 0 2 2 2 1 Phospholipid-translocating ATPase N-terminal E1-E2_ATPase PF00122.20 RKO92915.1 - 2.7e-07 30.3 1.0 2.9e-07 30.2 0.0 1.5 2 0 0 2 2 2 1 E1-E2 ATPase Cupin_3 PF05899.12 RKO92915.1 - 0.12 12.1 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF861) DUF678 PF05077.12 RKO92917.1 - 8.3 6.6 8.6 1.3 9.2 0.1 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF678) CTP_transf_1 PF01148.20 RKO92918.1 - 2.2e-76 257.1 20.1 2.7e-76 256.8 20.1 1.1 1 0 0 1 1 1 1 Cytidylyltransferase family 2-oxoacid_dh PF00198.23 RKO92919.1 - 1.6e-83 279.7 0.4 2.1e-83 279.3 0.4 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 RKO92919.1 - 9.4e-19 67.0 0.4 2.6e-18 65.6 0.2 1.9 2 0 0 2 2 2 1 Biotin-requiring enzyme E3_binding PF02817.17 RKO92919.1 - 8.1e-15 54.9 0.1 2.5e-14 53.3 0.1 1.9 1 0 0 1 1 1 1 e3 binding domain Biotin_lipoyl_2 PF13533.6 RKO92919.1 - 0.0081 16.0 0.1 0.022 14.6 0.1 1.7 1 0 0 1 1 1 1 Biotin-lipoyl like HTH_Tnp_Tc5 PF03221.16 RKO92919.1 - 0.16 12.0 0.0 20 5.3 0.0 2.5 2 0 0 2 2 2 0 Tc5 transposase DNA-binding domain HECT PF00632.25 RKO92921.1 - 2.3e-73 247.4 0.0 3.2e-73 246.9 0.0 1.1 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) MgtE PF01769.16 RKO92922.1 - 2.6e-07 31.1 2.1 2.6e-07 31.1 2.1 1.9 2 0 0 2 2 2 1 Divalent cation transporter ECF_trnsprt PF12822.7 RKO92922.1 - 0.036 14.2 4.5 0.053 13.6 4.5 1.2 1 0 0 1 1 1 0 ECF transporter, substrate-specific component PPR_2 PF13041.6 RKO92923.1 - 1.4e-13 50.8 0.0 8.4e-06 25.9 0.0 5.3 5 1 1 6 6 6 3 PPR repeat family PPR_3 PF13812.6 RKO92923.1 - 2.9e-07 30.5 0.0 8.1e-05 22.6 0.0 3.8 3 1 0 4 4 4 1 Pentatricopeptide repeat domain PPR_long PF17177.4 RKO92923.1 - 9.3e-05 21.9 0.0 0.11 11.8 0.0 3.7 2 1 1 3 3 3 1 Pentacotripeptide-repeat region of PRORP PPR PF01535.20 RKO92923.1 - 0.00031 20.8 1.1 0.017 15.3 0.0 4.4 5 0 0 5 5 5 1 PPR repeat PPR_1 PF12854.7 RKO92923.1 - 0.0083 15.8 0.0 3.2 7.5 0.0 3.9 4 0 0 4 4 4 1 PPR repeat HEAT_PBS PF03130.16 RKO92923.1 - 0.3 11.9 7.9 3.3 8.7 0.4 3.1 2 0 0 2 2 2 0 PBS lyase HEAT-like repeat Bax1-I PF01027.20 RKO92924.1 - 1.7e-52 178.2 26.0 2e-52 178.0 26.0 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 NCE101 PF11654.8 RKO92924.1 - 0.12 12.1 0.0 0.12 12.1 0.0 2.9 3 1 0 3 3 3 0 Non-classical export protein 1 NARP1 PF12569.8 RKO92925.1 - 0.094 11.6 2.4 0.13 11.1 2.4 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Pentapeptide_3 PF13576.6 RKO92927.1 - 2.1 8.6 8.6 0.44 10.7 0.1 4.0 3 0 0 3 3 3 0 Pentapeptide repeats (9 copies) HEAT_UF PF18817.1 RKO92928.1 - 7.3e-05 23.0 1.2 1e+02 3.3 0.0 6.1 1 1 5 7 7 7 0 Repeat of uncharacterized protein PH0542 Plasmod_dom_1 PF09715.10 RKO92928.1 - 0.19 11.8 10.8 0.46 10.6 1.1 3.0 1 1 1 3 3 3 0 Plasmodium protein of unknown function (Plasmod_dom_1) ATP-synt_F6 PF05511.11 RKO92928.1 - 0.84 10.1 14.1 21 5.6 0.2 4.7 1 1 3 5 5 5 0 Mitochondrial ATP synthase coupling factor 6 Tsp45I PF06300.12 RKO92928.1 - 1.8 8.1 8.5 12 5.3 1.4 3.1 1 1 2 3 3 3 0 Tsp45I type II restriction enzyme B_solenoid_ydck PF18836.1 RKO92928.1 - 3.3 7.7 5.2 3.2e+02 1.4 0.1 4.3 4 0 0 4 4 4 0 Beta solenoid repeat from YDCK LCD1 PF09798.9 RKO92928.1 - 9 4.7 11.8 18 3.6 3.5 1.9 1 1 1 2 2 2 0 DNA damage checkpoint protein CAP PF00188.26 RKO92929.1 - 5.8e-12 46.5 0.8 6.8e-12 46.3 0.8 1.0 1 0 0 1 1 1 1 Cysteine-rich secretory protein family Mei5 PF10376.9 RKO92931.1 - 0.13 12.1 8.7 0.21 11.4 8.7 1.2 1 0 0 1 1 1 0 Double-strand recombination repair protein Adeno_terminal PF02459.15 RKO92935.1 - 2 6.7 3.6 3 6.1 3.6 1.2 1 0 0 1 1 1 0 Adenoviral DNA terminal protein RabGAP-TBC PF00566.18 RKO92936.1 - 3.8e-55 186.9 0.0 5.6e-55 186.3 0.0 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain ZapB PF06005.12 RKO92936.1 - 0.0024 18.3 13.4 0.064 13.7 2.1 2.8 2 0 0 2 2 2 2 Cell division protein ZapB DUF3450 PF11932.8 RKO92936.1 - 0.29 10.4 9.5 0.53 9.5 9.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) Spc24 PF08286.11 RKO92936.1 - 0.61 10.4 6.3 9.3 6.6 0.3 2.6 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 IFP_35_N PF07334.13 RKO92936.1 - 0.93 9.6 3.8 0.69 10.0 0.4 2.2 2 0 0 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus Cnn_1N PF07989.11 RKO92936.1 - 1.8 8.8 12.8 0.9 9.7 2.2 3.5 3 1 1 4 4 4 0 Centrosomin N-terminal motif 1 Spc7 PF08317.11 RKO92936.1 - 4.3 6.1 13.4 1.1 8.0 3.7 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein CENP-F_leu_zip PF10473.9 RKO92936.1 - 4.6 7.2 16.5 1.3 9.0 8.2 2.6 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 CENP-H PF05837.12 RKO92936.1 - 6.5 7.2 14.0 3.4 8.1 3.4 2.5 1 1 1 2 2 2 0 Centromere protein H (CENP-H) GAS PF13851.6 RKO92936.1 - 6.5 6.0 14.4 6.5 6.1 2.3 2.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding YabA PF06156.13 RKO92936.1 - 6.9 7.4 7.8 12 6.6 0.8 2.7 1 1 2 3 3 3 0 Initiation control protein YabA DUF1876 PF08962.11 RKO92939.1 - 0.045 13.7 0.0 0.092 12.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1876) 2-oxoacid_dh PF00198.23 RKO92941.1 - 2.6e-35 121.9 0.0 2.9e-35 121.8 0.0 1.0 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PPR_2 PF13041.6 RKO92944.1 - 7.2e-13 48.5 0.0 1.9e-10 40.8 0.0 3.8 5 0 0 5 5 5 1 PPR repeat family PPR_long PF17177.4 RKO92944.1 - 1.6e-12 47.3 0.2 7.2e-06 25.5 0.0 2.8 2 1 1 3 3 3 2 Pentacotripeptide-repeat region of PRORP PPR_3 PF13812.6 RKO92944.1 - 1.6e-10 40.9 0.0 1.4e-07 31.5 0.0 3.9 4 0 0 4 4 4 1 Pentatricopeptide repeat domain PPR PF01535.20 RKO92944.1 - 7.4e-09 35.3 0.1 4.4e-05 23.4 0.0 5.6 7 1 0 7 7 7 1 PPR repeat PPR_1 PF12854.7 RKO92944.1 - 4.4e-05 23.1 8.2 0.0003 20.4 0.1 3.7 5 1 0 5 5 5 2 PPR repeat FeS_assembly_P PF01883.19 RKO92945.1 - 7.8e-09 35.6 0.2 1.5e-08 34.7 0.0 1.6 2 0 0 2 2 2 1 Iron-sulfur cluster assembly protein zf-MYND PF01753.18 RKO92946.1 - 0.035 14.2 12.1 0.035 14.2 12.1 2.1 2 0 0 2 2 2 0 MYND finger Androgen_recep PF02166.16 RKO92948.1 - 0.0072 15.2 4.2 0.018 13.9 4.2 1.7 1 0 0 1 1 1 1 Androgen receptor RasGEF PF00617.19 RKO92949.1 - 1.7e-33 116.3 0.0 2.7e-33 115.6 0.0 1.3 1 0 0 1 1 1 1 RasGEF domain zf-RanBP PF00641.18 RKO92951.1 - 6.3e-10 38.2 11.1 1.4e-05 24.3 2.3 2.6 2 0 0 2 2 2 2 Zn-finger in Ran binding protein and others Vps36-NZF-N PF16988.5 RKO92951.1 - 0.54 9.7 5.9 0.44 10.0 0.2 2.4 2 0 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain PPR_2 PF13041.6 RKO92953.1 - 8.5e-32 109.1 0.0 4.2e-08 33.3 0.0 8.4 5 2 4 9 9 9 6 PPR repeat family PPR PF01535.20 RKO92953.1 - 2.3e-23 80.7 0.5 0.045 14.0 0.0 10.3 12 0 0 12 12 12 6 PPR repeat PPR_3 PF13812.6 RKO92953.1 - 6.4e-22 77.4 0.0 2.5e-05 24.3 0.0 7.9 7 1 0 8 8 8 3 Pentatricopeptide repeat domain PPR_long PF17177.4 RKO92953.1 - 6.4e-16 58.4 3.3 4.7e-07 29.4 0.1 5.1 3 1 2 5 5 5 4 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 RKO92953.1 - 5.8e-08 32.3 0.0 14 5.5 0.0 7.2 8 0 0 8 8 8 2 PPR repeat TPR_14 PF13428.6 RKO92953.1 - 4e-06 27.2 26.5 4.4 8.4 1.9 10.7 8 1 3 11 11 11 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO92953.1 - 0.00036 21.0 9.9 5.2 7.6 0.0 5.9 5 1 0 5 5 5 2 Tetratricopeptide repeat Lipase_3 PF01764.25 RKO92954.1 - 8.7e-30 103.4 0.0 1.1e-29 103.1 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO92954.1 - 3.3e-06 26.8 0.8 2.1e-05 24.2 0.8 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Hydrolase_4 PF12146.8 RKO92954.1 - 0.00076 18.8 0.2 0.0031 16.8 0.1 1.8 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO92954.1 - 0.025 15.2 2.1 0.03 14.9 1.2 1.5 1 1 1 2 2 2 0 Alpha/beta hydrolase family Chlorophyllase PF07224.11 RKO92954.1 - 0.031 13.3 0.1 0.17 10.9 0.0 2.0 2 0 0 2 2 2 0 Chlorophyllase Esterase PF00756.20 RKO92954.1 - 0.082 12.5 0.1 0.13 11.9 0.1 1.3 1 0 0 1 1 1 0 Putative esterase DUF676 PF05057.14 RKO92954.1 - 0.13 11.8 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Arf PF00025.21 RKO92955.1 - 7.7e-45 152.5 0.1 9.3e-45 152.2 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Ras PF00071.22 RKO92955.1 - 5e-18 65.2 0.0 6.2e-18 64.9 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO92955.1 - 8.2e-17 61.5 0.0 1.2e-16 61.0 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Gtr1_RagA PF04670.12 RKO92955.1 - 3.5e-10 39.6 0.0 3.9e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 RKO92955.1 - 2.4e-09 36.9 0.0 2.9e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit G-alpha PF00503.20 RKO92955.1 - 2.2e-07 30.3 0.6 0.00028 20.2 0.1 2.4 1 1 1 2 2 2 2 G-protein alpha subunit MMR_HSR1 PF01926.23 RKO92955.1 - 1.3e-06 28.5 0.0 2.3e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 RKO92955.1 - 2e-05 24.2 0.1 0.00053 19.6 0.0 2.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain VirE PF05272.11 RKO92955.1 - 0.0075 16.0 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 Virulence-associated protein E cobW PF02492.19 RKO92955.1 - 0.019 14.6 0.1 2.2 7.8 0.0 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 RKO92955.1 - 0.023 15.0 0.0 0.5 10.6 0.0 2.3 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 RKO92955.1 - 0.041 13.4 0.0 0.072 12.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region NACHT PF05729.12 RKO92955.1 - 0.051 13.5 0.0 1.9 8.4 0.0 2.1 2 0 0 2 2 2 0 NACHT domain Dynamin_N PF00350.23 RKO92955.1 - 0.053 13.6 0.1 0.98 9.5 0.2 2.2 1 1 1 2 2 2 0 Dynamin family FeoB_N PF02421.18 RKO92955.1 - 0.053 13.1 0.1 0.14 11.7 0.0 1.8 2 0 0 2 2 2 0 Ferrous iron transport protein B AAA PF00004.29 RKO92955.1 - 0.086 13.3 0.0 0.12 12.8 0.0 1.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF2345 PF10106.9 RKO92960.1 - 2 8.3 8.5 8.6 6.2 0.0 3.4 4 1 0 4 4 4 0 Uncharacterized protein conserved in bacteria (DUF2345) DUF2345 PF10106.9 RKO92962.1 - 2.3e-07 30.8 60.3 0.0056 16.6 18.2 7.7 2 1 5 7 7 7 6 Uncharacterized protein conserved in bacteria (DUF2345) DUF3540 PF12059.8 RKO92962.1 - 2.1e-05 24.4 28.6 0.86 9.4 0.1 8.1 3 2 4 8 8 8 6 Protein of unknown function (DUF3540) Pentapeptide_4 PF13599.6 RKO92962.1 - 0.0056 16.8 2.2 0.16 12.2 2.8 3.0 2 1 0 2 2 2 1 Pentapeptide repeats (9 copies) MscL PF01741.18 RKO92963.1 - 3.7e-21 75.7 0.2 4.2e-21 75.5 0.2 1.0 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL MAPEG PF01124.18 RKO92963.1 - 0.061 13.2 0.1 0.094 12.6 0.1 1.5 1 1 0 1 1 1 0 MAPEG family JAB PF01398.21 RKO92964.1 - 2e-33 114.9 0.3 3.3e-33 114.2 0.3 1.4 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease CSN5_C PF18323.1 RKO92964.1 - 1.3e-27 96.5 0.3 3.1e-27 95.3 0.3 1.7 1 0 0 1 1 1 1 Cop9 signalosome subunit 5 C-terminal domain Prok-JAB PF14464.6 RKO92964.1 - 0.0079 16.0 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain LRR_9 PF14580.6 RKO92965.1 - 2.9e-12 46.4 0.1 1.3e-11 44.3 0.1 1.8 1 1 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 RKO92965.1 - 2e-10 40.7 0.8 0.00013 22.3 0.0 2.5 2 0 0 2 2 2 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO92965.1 - 1e-06 28.4 5.6 3.9e-06 26.5 1.8 2.4 2 0 0 2 2 2 1 Leucine rich repeat LRR_6 PF13516.6 RKO92965.1 - 0.15 12.2 0.0 38 4.7 0.0 3.2 3 0 0 3 3 3 0 Leucine Rich repeat LRR_1 PF00560.33 RKO92965.1 - 0.89 10.4 2.7 96 4.2 0.0 3.6 3 1 0 3 3 3 0 Leucine Rich Repeat HEAT PF02985.22 RKO92966.1 - 1.1e-18 65.7 12.9 0.0078 16.4 0.0 10.5 11 0 0 11 11 10 4 HEAT repeat HEAT_EZ PF13513.6 RKO92966.1 - 1.6e-16 60.4 7.2 3.2e-10 40.3 0.0 6.8 8 0 0 8 8 6 2 HEAT-like repeat HEAT_2 PF13646.6 RKO92966.1 - 1.9e-11 44.2 10.8 0.00027 21.2 0.1 7.0 3 2 4 8 8 8 5 HEAT repeats IBN_N PF03810.19 RKO92966.1 - 4.1e-08 33.0 3.0 3.7e-07 30.0 0.2 3.2 3 0 0 3 3 3 1 Importin-beta N-terminal domain MMS19_C PF12460.8 RKO92966.1 - 4.3e-06 26.1 4.8 1.3 8.1 0.0 4.3 2 1 2 4 4 4 2 RNAPII transcription regulator C-terminal Arm PF00514.23 RKO92966.1 - 2.3e-05 24.3 5.5 0.098 12.7 0.0 5.6 8 0 0 8 8 7 2 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 RKO92966.1 - 6.1e-05 23.1 7.4 0.0038 17.3 0.1 4.3 2 1 1 4 4 4 1 non-SMC mitotic condensation complex subunit 1 DUF3385 PF11865.8 RKO92966.1 - 0.00043 20.2 2.7 0.91 9.4 0.1 4.3 3 2 1 4 4 4 1 Domain of unknown function (DUF3385) CLASP_N PF12348.8 RKO92966.1 - 0.0022 17.6 2.0 6.1 6.3 0.1 4.7 3 1 2 5 5 5 2 CLASP N terminal DRIM PF07539.12 RKO92966.1 - 0.0039 15.6 1.0 0.33 9.2 0.0 3.4 1 1 2 3 3 3 1 Down-regulated in metastasis CAS_CSE1 PF03378.15 RKO92966.1 - 0.0071 14.9 2.5 0.52 8.7 0.1 2.7 2 1 0 2 2 2 2 CAS/CSE protein, C-terminus HEAT_PBS PF03130.16 RKO92966.1 - 0.011 16.3 2.5 0.89 10.4 0.1 5.1 5 0 0 5 5 5 0 PBS lyase HEAT-like repeat Dopey_N PF04118.14 RKO92966.1 - 0.014 14.6 0.5 0.28 10.2 0.0 3.2 2 2 1 3 3 3 0 Dopey, N-terminal Cnd3 PF12719.7 RKO92966.1 - 0.028 13.6 1.7 0.14 11.3 0.4 2.8 3 1 0 3 3 3 0 Nuclear condensing complex subunits, C-term domain Vac14_Fab1_bd PF12755.7 RKO92966.1 - 0.034 14.7 3.2 16 6.2 0.4 5.2 3 3 3 6 6 6 0 Vacuolar 14 Fab1-binding region MMS19_N PF14500.6 RKO92966.1 - 0.045 13.3 3.9 2 7.9 0.6 3.7 2 2 1 3 3 3 0 Dos2-interacting transcription regulator of RNA-Pol-II LRRC37 PF15779.5 RKO92968.1 - 0.0027 18.0 2.4 0.024 15.0 0.8 3.4 2 1 1 3 3 3 1 Leucine-rich repeat-containing protein 37 family Ribonuc_red_lgC PF02867.15 RKO92969.1 - 3.2e-178 593.5 0.0 4.2e-178 593.1 0.0 1.2 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 RKO92969.1 - 1.2e-23 82.9 0.2 3.1e-23 81.6 0.2 1.8 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 RKO92969.1 - 3.6e-14 53.1 0.0 1.1e-13 51.6 0.0 1.9 1 0 0 1 1 1 1 ATP cone domain APG9 PF04109.16 RKO92970.1 - 5.5e-50 170.8 0.1 6.5e-50 170.5 0.1 1.0 1 0 0 1 1 1 1 Autophagy protein Apg9 DMT_YdcZ PF04657.13 RKO92970.1 - 0.025 14.8 1.5 0.028 14.7 0.5 1.5 2 0 0 2 2 2 0 Putative inner membrane exporter, YdcZ DUF913 PF06025.12 RKO92971.1 - 3.4 6.5 5.9 3.8 6.4 5.9 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) Hid1 PF12722.7 RKO92971.1 - 3.5 5.6 4.8 3.7 5.6 4.8 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein AAA_11 PF13086.6 RKO92971.1 - 3.9 7.2 6.7 5.2 6.8 6.7 1.1 1 0 0 1 1 1 0 AAA domain Clr2_transil PF16761.5 RKO92972.1 - 0.04 14.7 0.8 11 6.9 0.6 2.5 1 1 1 2 2 2 0 Transcription-silencing protein, cryptic loci regulator Clr2 Gp_dh_C PF02800.20 RKO92973.1 - 2.9e-67 225.2 0.0 4.3e-67 224.6 0.0 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 RKO92973.1 - 2.4e-41 140.2 0.3 6.2e-41 138.8 0.0 1.8 2 1 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.20 RKO92973.1 - 0.0045 17.1 0.0 0.032 14.3 0.0 2.4 3 0 0 3 3 3 1 Dihydrodipicolinate reductase, N-terminus Ribosomal_L35Ae PF01247.18 RKO92974.1 - 5.9e-44 148.2 0.2 6.6e-44 148.0 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L35Ae RimM PF01782.18 RKO92974.1 - 0.016 15.4 0.1 0.34 11.2 0.0 2.1 2 0 0 2 2 2 0 RimM N-terminal domain Radial_spoke PF04712.12 RKO92975.1 - 5.4e-116 388.4 0.0 5.4e-116 388.4 0.0 2.5 1 1 1 2 2 2 1 Radial spokehead-like protein Polysacc_deac_1 PF01522.21 RKO92976.1 - 5.1e-27 94.2 0.0 5.7e-27 94.1 0.0 1.0 1 0 0 1 1 1 1 Polysaccharide deacetylase Alg6_Alg8 PF03155.15 RKO92977.1 - 3.5e-162 540.8 20.6 4.1e-162 540.5 20.6 1.0 1 0 0 1 1 1 1 ALG6, ALG8 glycosyltransferase family Kinesin PF00225.23 RKO92979.1 - 9.8e-112 373.2 0.0 1.1e-111 373.0 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO92979.1 - 1e-21 77.5 0.0 1.8e-21 76.6 0.0 1.4 1 0 0 1 1 1 1 Microtubule binding NUDIX PF00293.28 RKO92980.1 - 2.4e-11 43.8 0.1 2.5e-11 43.7 0.1 1.1 1 0 0 1 1 1 1 NUDIX domain DEAD PF00270.29 RKO92981.1 - 2e-47 161.2 0.1 3.3e-47 160.5 0.1 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO92981.1 - 3.4e-26 91.7 0.0 1e-24 87.0 0.0 3.1 4 0 0 4 4 4 1 Helicase conserved C-terminal domain DUF4217 PF13959.6 RKO92981.1 - 1e-17 64.1 0.1 1.8e-17 63.3 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) ResIII PF04851.15 RKO92981.1 - 4e-05 23.7 0.0 7.3e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SecA_DEAD PF07517.14 RKO92981.1 - 0.036 13.3 0.0 0.073 12.4 0.0 1.5 1 0 0 1 1 1 0 SecA DEAD-like domain LRR_8 PF13855.6 RKO92982.1 - 5.2e-08 32.5 5.3 2.8e-07 30.2 1.0 1.9 1 1 1 2 2 2 2 Leucine rich repeat LRR_4 PF12799.7 RKO92982.1 - 4.2e-06 27.0 3.5 0.069 13.6 0.1 2.3 1 1 0 2 2 2 2 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 RKO92982.1 - 0.0037 16.8 0.4 0.0043 16.6 0.4 1.1 1 0 0 1 1 1 1 Leucine-rich repeat zf-MYND PF01753.18 RKO92983.1 - 0.00038 20.5 2.9 0.00038 20.5 2.9 2.4 3 0 0 3 3 3 1 MYND finger EF-hand_1 PF00036.32 RKO92984.1 - 4.8e-40 132.1 17.0 8.2e-10 37.5 1.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 RKO92984.1 - 2.8e-35 120.6 4.7 3.7e-18 65.7 0.7 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 RKO92984.1 - 4.4e-31 106.5 12.6 5.3e-15 55.0 0.7 3.7 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 RKO92984.1 - 1.9e-30 102.1 9.6 3.9e-09 35.7 0.0 4.4 4 2 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 RKO92984.1 - 1.7e-25 87.3 13.5 2.7e-06 26.6 0.1 4.3 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 RKO92984.1 - 6.5e-17 61.6 0.1 2.2e-10 40.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 RKO92984.1 - 6.9e-10 38.8 3.3 3.7e-05 23.6 0.3 2.5 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 RKO92984.1 - 1.4e-09 38.3 1.0 0.0009 19.5 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region UPF0154 PF03672.13 RKO92984.1 - 2.8e-07 30.5 0.2 0.15 12.1 0.0 3.2 2 1 1 3 3 3 2 Uncharacterised protein family (UPF0154) EFhand_Ca_insen PF08726.10 RKO92984.1 - 3.1e-05 24.0 0.8 0.00012 22.1 0.1 2.2 2 1 0 2 2 2 1 Ca2+ insensitive EF hand Dockerin_1 PF00404.18 RKO92984.1 - 0.00037 20.6 4.8 0.029 14.6 0.5 3.2 1 1 2 3 3 3 1 Dockerin type I domain Caleosin PF05042.13 RKO92984.1 - 0.00042 20.3 2.0 1.6 8.6 0.0 3.8 1 1 3 4 4 4 1 Caleosin related protein EF-hand_11 PF08976.11 RKO92984.1 - 0.00062 20.6 0.1 0.048 14.5 0.0 2.1 1 1 1 2 2 2 1 EF-hand domain DUF5580 PF17743.1 RKO92984.1 - 0.00064 18.4 0.0 0.00074 18.2 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5580) RNA_pol_Rpb4 PF03874.16 RKO92984.1 - 0.0019 18.5 1.0 1.1 9.6 0.1 2.8 2 1 1 3 3 3 1 RNA polymerase Rpb4 MotA_activ PF09114.10 RKO92984.1 - 0.0025 17.9 0.3 0.0092 16.1 0.1 1.9 1 1 0 2 2 2 1 Transcription factor MotA, activation domain TerB PF05099.13 RKO92984.1 - 0.0039 17.2 0.4 0.42 10.6 0.0 2.3 1 1 1 2 2 2 1 Tellurite resistance protein TerB Poly_export PF02563.16 RKO92984.1 - 0.0054 16.9 0.2 8 6.8 0.0 3.0 1 1 1 2 2 2 0 Polysaccharide biosynthesis/export protein EcoR124_C PF12008.8 RKO92984.1 - 0.008 15.9 1.4 0.008 15.9 1.4 1.9 1 1 0 2 2 2 1 Type I restriction and modification enzyme - subunit R C terminal Fe_hyd_lg_C PF02906.14 RKO92984.1 - 0.011 15.4 2.8 0.083 12.5 2.8 2.0 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain DUF2267 PF10025.9 RKO92984.1 - 0.018 15.3 0.0 0.05 13.9 0.0 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) SurA_N_2 PF13623.6 RKO92984.1 - 0.024 14.5 1.8 0.81 9.5 0.5 2.2 1 1 1 2 2 2 0 SurA N-terminal domain DUF4497 PF14924.6 RKO92984.1 - 0.025 15.1 0.0 1.4 9.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4497) Spore_III_AB PF09548.10 RKO92984.1 - 0.05 13.7 1.2 0.096 12.8 1.1 1.6 1 1 0 1 1 1 0 Stage III sporulation protein AB (spore_III_AB) dCache_2 PF08269.11 RKO92984.1 - 0.051 12.7 0.4 1.3 8.2 0.3 2.3 1 1 1 2 2 2 0 Cache domain Toprim_4 PF13662.6 RKO92984.1 - 0.086 13.3 2.1 3.5 8.2 0.1 2.9 2 1 1 3 3 3 0 Toprim domain PMBR PF09373.10 RKO92984.1 - 0.092 12.9 0.0 20 5.6 0.0 3.1 3 0 0 3 3 2 0 Pseudomurein-binding repeat Vps23_core PF09454.10 RKO92984.1 - 0.1 12.6 0.0 6.5 6.8 0.0 2.8 2 1 0 2 2 2 0 Vps23 core domain ARL2_Bind_BART PF11527.8 RKO92984.1 - 8.5 6.5 9.6 6.2 6.9 2.3 2.7 1 1 1 2 2 2 0 The ARF-like 2 binding protein BART EST1 PF10374.9 RKO92985.1 - 4e-11 43.7 0.0 1.2e-10 42.2 0.0 1.8 2 0 0 2 2 2 1 Telomerase activating protein Est1 EST1_DNA_bind PF10373.9 RKO92985.1 - 1.7e-10 40.8 0.2 2.4e-10 40.4 0.2 1.2 1 0 0 1 1 1 1 Est1 DNA/RNA binding domain TPR_2 PF07719.17 RKO92985.1 - 0.0069 16.4 1.5 0.36 11.1 0.0 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 RKO92985.1 - 0.0099 16.2 0.6 0.033 14.6 0.1 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 RKO92985.1 - 0.078 12.7 0.1 0.22 11.3 0.1 1.8 1 0 0 1 1 1 0 TPR repeat TPR_14 PF13428.6 RKO92985.1 - 0.37 11.7 4.3 0.52 11.3 0.1 3.4 3 1 0 3 3 3 0 Tetratricopeptide repeat TANGO2 PF05742.12 RKO92986.1 - 1e-51 176.4 0.0 1.2e-51 176.2 0.0 1.0 1 0 0 1 1 1 1 Transport and Golgi organisation 2 Carb_kinase PF01256.17 RKO92987.1 - 3.4e-51 174.1 0.0 4.1e-51 173.8 0.0 1.1 1 0 0 1 1 1 1 Carbohydrate kinase Phos_pyr_kin PF08543.12 RKO92987.1 - 0.13 11.6 0.0 0.27 10.6 0.0 1.5 1 1 0 1 1 1 0 Phosphomethylpyrimidine kinase Cnd3 PF12719.7 RKO92988.1 - 4e-24 85.3 0.1 5.3e-24 84.9 0.1 1.2 1 0 0 1 1 1 1 Nuclear condensing complex subunits, C-term domain 2OG-FeII_Oxy PF03171.20 RKO92990.1 - 9.5e-22 77.4 0.0 1.7e-21 76.6 0.0 1.4 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DIOX_N PF14226.6 RKO92990.1 - 2.6e-11 44.3 0.0 4.3e-11 43.6 0.0 1.3 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal DUF2746 PF10874.8 RKO92992.1 - 0.7 10.3 3.1 3.3 8.2 0.2 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2746) DUF4440 PF14534.6 RKO92992.1 - 1.1 9.7 11.4 0.21 12.0 0.4 3.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4440) MULE PF10551.9 RKO92993.1 - 0.12 12.8 0.1 0.32 11.4 0.0 1.7 2 0 0 2 2 2 0 MULE transposase domain DUF2181 PF10223.9 RKO92994.1 - 4.2e-36 124.7 0.0 6e-36 124.1 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2181) GDPD PF03009.17 RKO92994.1 - 0.0053 16.5 0.2 0.0087 15.8 0.2 1.2 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family F-box-like PF12937.7 RKO92995.1 - 1.1e-05 25.2 3.3 0.0043 16.9 0.0 3.1 3 0 0 3 3 3 2 F-box-like F-box PF00646.33 RKO92995.1 - 0.1 12.5 2.1 7.3 6.6 0.0 3.6 3 1 0 3 3 3 0 F-box domain DJ-1_PfpI PF01965.24 RKO92999.1 - 1e-42 145.7 0.2 1.2e-42 145.5 0.2 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family ThiJ_like PF17124.5 RKO92999.1 - 0.075 12.7 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 ThiJ/PfpI family-like PHB_depo_C PF06850.11 RKO93000.1 - 0.018 14.5 0.1 0.027 13.9 0.1 1.2 1 0 0 1 1 1 0 PHB de-polymerase C-terminus DUF5376 PF17346.2 RKO93000.1 - 0.04 14.3 2.4 0.069 13.5 2.4 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5376) TraG-D_C PF12696.7 RKO93000.1 - 0.52 10.3 5.6 0.14 12.2 0.4 2.2 2 0 0 2 2 2 0 TraM recognition site of TraD and TraG CdiI_2 PF18593.1 RKO93000.1 - 0.98 10.1 4.4 0.42 11.3 0.4 2.5 3 0 0 3 3 3 0 CdiI immunity protein TAP42 PF04177.12 RKO93001.1 - 6.6e-85 285.0 3.3 7.4e-85 284.9 3.3 1.0 1 0 0 1 1 1 1 TAP42-like family XRN_M PF17846.1 RKO93002.1 - 10 5.0 10.2 16 4.3 10.2 1.2 1 0 0 1 1 1 0 Xrn1 helical domain OrfB_Zn_ribbon PF07282.11 RKO93005.1 - 0.009 15.9 2.3 0.017 15.0 0.4 2.4 3 0 0 3 3 3 1 Putative transposase DNA-binding domain Hydrolase_3 PF08282.12 RKO93005.1 - 0.068 12.9 4.9 0.091 12.5 4.9 1.1 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Mu-transpos_C PF09299.11 RKO93006.1 - 0.15 12.0 0.1 0.23 11.5 0.1 1.3 1 0 0 1 1 1 0 Mu transposase, C-terminal DNA_pol_B PF00136.21 RKO93007.1 - 1.6e-76 257.9 1.1 2.1e-42 145.4 0.0 2.1 2 0 0 2 2 2 2 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 RKO93007.1 - 7.6e-29 100.9 3.3 1.2e-27 96.9 3.3 2.5 1 1 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_2 PF03175.13 RKO93007.1 - 6.3e-05 22.0 4.3 0.00013 21.0 0.1 2.8 3 0 0 3 3 3 1 DNA polymerase type B, organellar and viral RNase_H_2 PF13482.6 RKO93007.1 - 0.00031 20.8 0.5 0.0037 17.3 0.5 2.5 1 1 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 RKO93007.1 - 0.0041 16.8 0.5 0.13 12.0 0.5 2.4 1 1 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB Pec_lyase_C PF00544.19 RKO93007.1 - 0.078 12.6 0.0 0.16 11.5 0.0 1.5 1 0 0 1 1 1 0 Pectate lyase YjhX_toxin PF09857.9 RKO93009.1 - 0.024 14.6 0.0 0.076 13.0 0.0 1.7 1 1 1 2 2 2 0 Putative toxin of bacterial toxin-antitoxin pair C2 PF00168.30 RKO93011.1 - 1.1e-30 105.9 0.0 1.1e-17 64.2 0.0 2.5 2 0 0 2 2 2 2 C2 domain RasGAP PF00616.19 RKO93011.1 - 9.5e-24 84.3 0.4 2.1e-11 43.9 0.0 2.4 2 0 0 2 2 2 2 GTPase-activator protein for Ras-like GTPase LIM PF00412.22 RKO93011.1 - 4.6e-21 74.8 37.2 1.7e-10 40.9 4.0 4.3 5 0 0 5 5 5 3 LIM domain Nup54_57_C PF18570.1 RKO93012.1 - 0.0014 18.1 0.0 25 4.5 0.0 5.2 5 0 0 5 5 5 1 NUP57/Nup54 C-terminal domain ZapB PF06005.12 RKO93012.1 - 0.011 16.1 3.3 0.011 16.1 3.3 14.0 6 4 6 12 12 12 0 Cell division protein ZapB HSBP1 PF06825.12 RKO93012.1 - 0.013 15.4 3.8 2.3 8.1 0.1 4.9 4 0 0 4 4 4 0 Heat shock factor binding protein 1 Tup_N PF08581.10 RKO93012.1 - 0.044 14.1 0.4 0.044 14.1 0.4 9.7 8 3 3 12 12 12 0 Tup N-terminal DUF2183 PF09949.9 RKO93012.1 - 0.9 9.9 6.2 2.9 8.3 0.0 4.6 6 0 0 6 6 6 0 Uncharacterized conserved protein (DUF2183) TSC22 PF01166.18 RKO93012.1 - 2.8 8.3 55.8 0.32 11.3 0.6 10.2 9 0 0 9 9 9 0 TSC-22/dip/bun family Ank_2 PF12796.7 RKO93013.1 - 3.2e-21 75.7 7.5 0.00082 19.9 0.2 7.4 6 1 1 7 7 7 6 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO93013.1 - 2.9e-15 56.4 10.6 0.093 13.3 0.1 10.4 7 3 5 12 12 12 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO93013.1 - 2.5e-13 50.0 11.0 0.0037 17.5 0.0 9.8 9 1 1 10 10 10 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO93013.1 - 1.6e-10 40.3 2.8 14 6.7 0.1 9.8 8 2 2 10 10 10 1 Ankyrin repeat DUF3447 PF11929.8 RKO93013.1 - 0.045 13.7 0.0 0.31 11.0 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3447) MbeB_N PF04837.12 RKO93013.1 - 0.064 13.6 0.0 0.26 11.6 0.0 2.0 1 0 0 1 1 1 0 MbeB-like, N-term conserved region Lipase_3 PF01764.25 RKO93014.1 - 1.5e-19 70.3 0.0 1.8e-19 70.0 0.0 1.1 1 0 0 1 1 1 1 Lipase (class 3) Chlorophyllase PF07224.11 RKO93014.1 - 0.11 11.5 0.0 0.15 11.0 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase p450 PF00067.22 RKO93015.1 - 1.3e-45 156.1 0.0 1.4e-45 155.9 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 KAP PF05804.12 RKO93016.1 - 5.9e-228 758.6 30.3 1.5e-179 598.5 15.2 2.0 1 1 1 2 2 2 2 Kinesin-associated protein (KAP) DUF4188 PF13826.6 RKO93017.1 - 6.7e-33 113.5 0.0 9.6e-33 113.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4188) Dehydratase_hem PF13816.6 RKO93017.1 - 0.0029 17.1 0.0 0.0039 16.6 0.0 1.1 1 0 0 1 1 1 1 Haem-containing dehydratase LMBR1 PF04791.16 RKO93019.1 - 1.8e-36 126.1 23.4 1.1e-22 80.6 1.2 2.0 1 1 1 2 2 2 2 LMBR1-like membrane protein DUF2914 PF11141.8 RKO93020.1 - 0.055 13.2 0.1 0.34 10.7 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2914) Pkinase PF00069.25 RKO93022.1 - 3e-76 256.3 0.0 3.4e-76 256.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO93022.1 - 2.8e-42 144.8 0.0 3.3e-42 144.5 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO93022.1 - 1.1e-07 31.5 0.0 1.9e-06 27.4 0.0 2.3 1 1 2 3 3 3 1 Kinase-like APH PF01636.23 RKO93022.1 - 1e-06 28.9 0.2 0.0004 20.4 0.1 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family RIO1 PF01163.22 RKO93022.1 - 2e-05 24.3 0.3 3.4e-05 23.5 0.3 1.3 1 0 0 1 1 1 1 RIO1 family Haspin_kinase PF12330.8 RKO93022.1 - 2.3e-05 23.5 0.8 2.9e-05 23.2 0.8 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 RKO93022.1 - 0.015 14.6 0.4 0.032 13.6 0.4 1.6 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Choline_kinase PF01633.20 RKO93022.1 - 0.019 14.6 0.9 0.041 13.5 0.3 1.6 1 1 1 2 2 2 0 Choline/ethanolamine kinase Ribosomal_S9 PF00380.19 RKO93023.1 - 0.0023 18.4 0.0 2.6 8.6 0.0 2.2 1 1 1 2 2 2 2 Ribosomal protein S9/S16 DUF5393 PF17371.2 RKO93023.1 - 0.19 9.8 0.0 0.2 9.7 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5393) Avl9 PF09794.9 RKO93024.1 - 1.6e-36 125.9 0.0 1.8e-36 125.6 0.0 1.0 1 0 0 1 1 1 1 Transport protein Avl9 DUF2347 PF09804.9 RKO93024.1 - 0.095 12.3 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2347) ThrE PF06738.12 RKO93025.1 - 2.3e-35 122.1 26.4 1.1e-21 77.3 4.9 3.0 3 0 0 3 3 3 3 Putative threonine/serine exporter ThrE_2 PF12821.7 RKO93025.1 - 6.1e-06 26.4 9.9 6.1e-06 26.4 9.9 3.2 3 1 0 3 3 3 2 Threonine/Serine exporter, ThrE PRA1 PF03208.19 RKO93027.1 - 7.3e-27 93.8 5.1 8.5e-27 93.5 5.1 1.0 1 0 0 1 1 1 1 PRA1 family protein Gemini_mov PF01708.16 RKO93027.1 - 1 9.2 5.0 0.11 12.3 0.5 1.7 2 0 0 2 2 2 0 Geminivirus putative movement protein XG_FTase PF03254.13 RKO93028.1 - 1.3e-13 50.4 0.0 6.4e-12 44.9 0.0 2.7 1 1 0 1 1 1 1 Xyloglucan fucosyltransferase NodZ PF05830.11 RKO93028.1 - 0.0021 17.0 0.0 0.31 9.8 0.0 2.2 2 0 0 2 2 2 2 Nodulation protein Z (NodZ) Nmad5 PF18757.1 RKO93028.1 - 0.15 12.3 0.0 0.33 11.1 0.0 1.6 1 1 0 1 1 1 0 Nucleotide modification associated domain 5 PCNA_N PF00705.18 RKO93030.1 - 1.9e-50 169.8 1.6 1.9e-50 169.8 1.6 2.0 3 0 0 3 3 3 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 RKO93030.1 - 2.1e-45 154.0 1.9 1.4e-44 151.3 1.8 2.3 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad1 PF02144.16 RKO93030.1 - 9.7e-07 28.1 1.8 1.4e-05 24.3 1.8 2.0 1 1 0 1 1 1 1 Repair protein Rad1/Rec1/Rad17 Rad9 PF04139.13 RKO93030.1 - 0.00014 21.4 0.2 0.00031 20.3 0.2 1.6 1 1 0 1 1 1 1 Rad9 Ephrin_rec_like PF07699.13 RKO93031.1 - 0.0081 15.9 7.4 0.014 15.1 7.4 1.5 1 1 0 1 1 1 1 Putative ephrin-receptor like NCD3G PF07562.14 RKO93031.1 - 0.01 15.8 2.1 0.01 15.8 2.1 1.6 1 1 0 1 1 1 0 Nine Cysteines Domain of family 3 GPCR PRP21_like_P PF12230.8 RKO93032.1 - 1.8e-07 31.3 0.1 3e-07 30.5 0.1 1.4 1 0 0 1 1 1 1 Pre-mRNA splicing factor PRP21 like protein Aldedh PF00171.22 RKO93033.1 - 4.7e-121 404.5 0.0 5.5e-121 404.3 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family CTU2 PF10288.9 RKO93034.1 - 2.6e-11 43.8 0.0 4e-11 43.1 0.0 1.3 1 0 0 1 1 1 1 Cytoplasmic tRNA 2-thiolation protein 2 Pkinase PF00069.25 RKO93036.1 - 5.7e-59 199.6 0.0 6.8e-59 199.4 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO93036.1 - 5.8e-44 150.3 0.0 7.2e-44 150.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO93036.1 - 8.6e-07 28.1 0.0 1.3e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 RKO93036.1 - 5.8e-06 25.8 0.0 1.7e-05 24.3 0.0 1.7 2 0 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 RKO93036.1 - 0.023 13.6 0.1 0.64 8.9 0.1 2.1 1 1 0 1 1 1 0 Haspin like kinase domain APH PF01636.23 RKO93036.1 - 0.044 13.7 0.0 0.076 12.9 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family SHIPPO-rpt PF07004.12 RKO93037.1 - 5.8e-14 52.3 19.8 0.14 13.2 2.2 8.4 8 0 0 8 8 8 7 Sperm-tail PG-rich repeat Fer4_19 PF06902.11 RKO93038.1 - 0.076 13.1 2.8 6.4 6.9 0.3 2.2 1 1 1 2 2 2 0 Divergent 4Fe-4S mono-cluster Methyltransf_11 PF08241.12 RKO93039.1 - 1.4e-06 28.8 1.1 8.2e-05 23.2 1.1 2.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 RKO93039.1 - 1.7e-06 28.6 0.6 0.11 13.3 0.0 3.2 2 1 0 2 2 2 2 Methyltransferase domain Methyltransf_31 PF13847.6 RKO93039.1 - 2.2e-05 24.3 0.0 0.022 14.6 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain MTS PF05175.14 RKO93039.1 - 0.00024 20.7 0.0 0.00037 20.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.12 RKO93039.1 - 0.012 16.4 0.1 3.1 8.6 0.0 2.9 2 1 0 2 2 2 0 Methyltransferase domain Methyltransf_23 PF13489.6 RKO93039.1 - 0.02 14.7 0.0 0.055 13.3 0.0 1.9 1 1 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 RKO93039.1 - 0.024 14.0 0.1 0.13 11.6 0.0 1.9 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase FtsJ PF01728.19 RKO93039.1 - 0.049 13.7 0.0 0.064 13.4 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase Ubie_methyltran PF01209.18 RKO93039.1 - 0.091 12.1 0.3 2.5 7.3 0.3 2.1 1 1 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_16 PF10294.9 RKO93039.1 - 0.14 11.9 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_4 PF02390.17 RKO93039.1 - 0.19 11.2 0.0 0.41 10.1 0.0 1.5 2 0 0 2 2 2 0 Putative methyltransferase Methyltransf_29 PF03141.16 RKO93039.1 - 0.19 10.2 0.0 1 7.8 0.0 1.8 2 0 0 2 2 2 0 Putative S-adenosyl-L-methionine-dependent methyltransferase zf-MYND PF01753.18 RKO93041.1 - 9.8e-08 32.0 11.0 2.1e-07 30.9 11.0 1.6 1 0 0 1 1 1 1 MYND finger zf-C6H2 PF15801.5 RKO93041.1 - 0.51 10.7 6.4 1.1 9.6 6.4 1.5 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding MDM31_MDM32 PF08118.11 RKO93042.1 - 0.0056 15.4 0.1 0.0065 15.2 0.1 1.1 1 0 0 1 1 1 1 Yeast mitochondrial distribution and morphology (MDM) proteins OAS1_C PF10421.9 RKO93042.1 - 0.1 12.1 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 2'-5'-oligoadenylate synthetase 1, domain 2, C-terminus AMP-binding PF00501.28 RKO93043.1 - 3.4e-64 217.0 0.0 9.5e-37 126.6 0.0 2.1 1 1 1 2 2 2 2 AMP-binding enzyme ACAS_N PF16177.5 RKO93043.1 - 6.5e-12 45.2 0.5 1.4e-11 44.1 0.5 1.5 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 RKO93043.1 - 1.1e-10 42.3 0.0 8.6e-10 39.5 0.0 2.4 1 1 0 1 1 1 1 AMP-binding enzyme C-terminal domain AT_hook PF02178.19 RKO93044.1 - 0.44 10.6 15.7 0.82 9.7 6.5 3.5 2 0 0 2 2 2 0 AT hook motif tRNA-synt_2 PF00152.20 RKO93045.1 - 3.9e-06 26.2 0.0 4.2e-06 26.1 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) Neuregulin PF02158.15 RKO93046.1 - 0.07 12.5 0.4 0.11 11.8 0.4 1.2 1 0 0 1 1 1 0 Neuregulin intracellular region NTP_transferase PF00483.23 RKO93050.1 - 2.3e-18 66.7 0.0 3.6e-18 66.1 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 RKO93050.1 - 3e-11 42.6 7.4 2.4e-07 30.2 0.0 4.2 2 1 1 3 3 3 3 Bacterial transferase hexapeptide (six repeats) IlvN PF07991.12 RKO93051.1 - 3.8e-45 153.4 0.0 5.5e-45 152.9 0.0 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 RKO93051.1 - 5.4e-40 137.0 0.0 7.9e-40 136.5 0.0 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain NAD_binding_2 PF03446.15 RKO93051.1 - 0.094 12.9 0.0 0.2 11.8 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase EB PF01683.18 RKO93052.1 - 0.0096 16.2 100.5 1.2 9.5 3.4 9.6 3 3 7 10 10 10 10 EB module DSBA PF01323.20 RKO93052.1 - 3.1 7.5 7.8 89 2.8 0.1 4.5 5 0 0 5 5 5 0 DSBA-like thioredoxin domain RGCC PF15151.6 RKO93054.1 - 0.088 13.0 0.0 0.21 11.8 0.0 1.6 1 0 0 1 1 1 0 Response gene to complement 32 protein family Sel1 PF08238.12 RKO93055.1 - 2.7e-09 37.4 10.8 0.29 11.9 0.0 5.9 6 0 0 6 6 6 4 Sel1 repeat adh_short_C2 PF13561.6 RKO93056.1 - 4e-26 92.0 0.0 4.3e-26 91.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO93056.1 - 2.8e-18 66.1 0.0 3e-18 66.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase Saf-Nte_pilin PF09460.10 RKO93056.1 - 0.041 13.9 0.0 0.046 13.7 0.0 1.2 1 0 0 1 1 1 0 Saf-pilin pilus formation protein Epimerase PF01370.21 RKO93056.1 - 0.095 12.1 0.0 0.095 12.1 0.0 1.1 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family adh_short PF00106.25 RKO93057.1 - 1.7e-14 53.7 2.3 2e-14 53.5 2.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO93057.1 - 2.3e-11 43.7 3.5 2.9e-11 43.4 3.5 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 RKO93057.1 - 5e-06 26.5 1.0 6.7e-06 26.1 1.0 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 RKO93057.1 - 0.044 13.2 0.1 0.058 12.8 0.1 1.1 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family RepC PF06504.11 RKO93059.1 - 0.021 14.0 0.0 0.03 13.5 0.0 1.3 1 0 0 1 1 1 0 Replication protein C (RepC) DUF4208 PF13907.6 RKO93059.1 - 0.043 14.3 0.5 0.12 12.8 0.4 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4208) GM_CSF PF01109.17 RKO93059.1 - 0.069 13.3 1.5 0.43 10.7 0.3 2.1 2 0 0 2 2 2 0 Granulocyte-macrophage colony-stimulating factor IL5 PF02025.15 RKO93059.1 - 0.095 13.0 2.9 0.35 11.2 1.0 2.1 1 1 1 2 2 2 0 Interleukin 5 NOG1_N PF17835.1 RKO93059.1 - 0.11 12.5 0.3 0.72 9.8 0.1 2.2 1 1 1 2 2 2 0 NOG1 N-terminal helical domain RepC PF06504.11 RKO93060.1 - 0.021 14.0 0.0 0.03 13.5 0.0 1.3 1 0 0 1 1 1 0 Replication protein C (RepC) DUF4208 PF13907.6 RKO93060.1 - 0.043 14.3 0.5 0.12 12.8 0.4 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4208) GM_CSF PF01109.17 RKO93060.1 - 0.069 13.3 1.5 0.43 10.7 0.3 2.1 2 0 0 2 2 2 0 Granulocyte-macrophage colony-stimulating factor IL5 PF02025.15 RKO93060.1 - 0.095 13.0 2.9 0.35 11.2 1.0 2.1 1 1 1 2 2 2 0 Interleukin 5 NOG1_N PF17835.1 RKO93060.1 - 0.11 12.5 0.3 0.72 9.8 0.1 2.2 1 1 1 2 2 2 0 NOG1 N-terminal helical domain PCNA_C PF02747.15 RKO93061.1 - 5.6e-15 55.7 0.1 1.7e-14 54.1 0.0 1.9 3 0 0 3 3 3 1 Proliferating cell nuclear antigen, C-terminal domain PCNA_N PF00705.18 RKO93061.1 - 0.07 12.8 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Proliferating cell nuclear antigen, N-terminal domain ParcG PF10274.9 RKO93062.1 - 3.8e-40 138.0 0.0 6.8e-40 137.1 0.0 1.4 1 1 0 1 1 1 1 Parkin co-regulated protein RTP1_C1 PF10363.9 RKO93062.1 - 0.0011 19.1 0.0 0.0015 18.7 0.0 1.2 1 0 0 1 1 1 1 Required for nuclear transport of RNA pol II C-terminus 1 UCR_Fe-S_N PF10399.9 RKO93062.1 - 0.058 12.7 0.5 0.11 11.9 0.5 1.5 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Ssl1 PF04056.14 RKO93064.1 - 1.4e-79 266.5 0.0 1.7e-79 266.1 0.0 1.1 1 0 0 1 1 1 1 Ssl1-like C1_4 PF07975.12 RKO93064.1 - 8.4e-13 48.4 9.3 8.4e-13 48.4 9.3 2.5 2 0 0 2 2 2 1 TFIIH C1-like domain VWA_2 PF13519.6 RKO93064.1 - 3.4e-11 43.7 0.0 1.2e-10 41.9 0.0 1.8 2 0 0 2 2 2 1 von Willebrand factor type A domain Tfb4 PF03850.14 RKO93064.1 - 8e-07 28.8 0.2 9.2e-07 28.6 0.2 1.3 1 0 0 1 1 1 1 Transcription factor Tfb4 VWA PF00092.28 RKO93064.1 - 0.018 15.3 0.0 0.03 14.6 0.0 1.4 1 0 0 1 1 1 0 von Willebrand factor type A domain tRNA-synt_2 PF00152.20 RKO93065.1 - 5.7e-83 278.6 0.0 6.7e-83 278.4 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 RKO93065.1 - 3.4e-09 36.6 0.1 5.5e-09 35.9 0.1 1.3 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Ferritin_2 PF13668.6 RKO93066.1 - 9.8e-29 100.3 0.1 1.2e-28 99.9 0.1 1.1 1 0 0 1 1 1 1 Ferritin-like domain SHIPPO-rpt PF07004.12 RKO93067.1 - 0.044 14.7 9.6 0.42 11.6 0.5 3.8 3 1 0 3 3 3 0 Sperm-tail PG-rich repeat SH3_9 PF14604.6 RKO93069.1 - 2.3e-10 40.2 0.1 4.2e-10 39.3 0.1 1.5 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO93069.1 - 5.7e-05 22.6 0.0 9.5e-05 21.9 0.0 1.4 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 RKO93069.1 - 0.0026 17.4 0.1 0.0054 16.4 0.1 1.5 1 0 0 1 1 1 1 Variant SH3 domain Glyco_transf_8 PF01501.20 RKO93072.1 - 9.5e-17 61.4 0.0 1.8e-15 57.2 0.0 2.3 1 1 0 1 1 1 1 Glycosyl transferase family 8 ABC_membrane PF00664.23 RKO93073.1 - 2.1e-63 214.5 10.5 5.4e-33 114.8 0.2 2.4 2 1 0 2 2 2 2 ABC transporter transmembrane region ABC_tran PF00005.27 RKO93073.1 - 1.2e-48 165.1 0.0 2.1e-25 89.8 0.0 2.3 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 RKO93073.1 - 1.6e-12 47.4 0.2 1.8e-06 27.5 0.0 4.1 3 1 0 3 3 3 3 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 RKO93073.1 - 6.8e-06 26.2 1.3 0.086 12.9 0.1 3.0 3 0 0 3 3 2 2 50S ribosome-binding GTPase AAA_21 PF13304.6 RKO93073.1 - 2.5e-05 24.3 2.6 2.3 7.9 0.0 3.9 3 1 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 RKO93073.1 - 6.2e-05 22.7 0.7 0.36 10.6 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 RKO93073.1 - 7.2e-05 22.7 2.1 0.04 13.8 0.1 3.0 3 0 0 3 3 3 2 RsgA GTPase AAA_23 PF13476.6 RKO93073.1 - 0.00012 22.7 0.7 0.1 13.1 0.1 2.3 2 0 0 2 2 2 2 AAA domain DUF87 PF01935.17 RKO93073.1 - 0.00034 20.8 2.2 0.42 10.7 0.4 2.3 2 0 0 2 2 2 2 Helicase HerA, central domain AAA_16 PF13191.6 RKO93073.1 - 0.0028 18.1 2.3 0.95 9.8 0.2 3.4 3 1 0 3 3 3 1 AAA ATPase domain AAA_22 PF13401.6 RKO93073.1 - 0.0062 16.8 1.5 5.9 7.2 0.3 3.3 3 0 0 3 3 3 1 AAA domain AAA_25 PF13481.6 RKO93073.1 - 0.011 15.3 1.5 2.6 7.6 0.0 3.2 3 0 0 3 3 3 0 AAA domain Dynamin_N PF00350.23 RKO93073.1 - 0.022 14.8 1.7 0.44 10.6 0.1 3.0 3 0 0 3 3 3 0 Dynamin family AAA_18 PF13238.6 RKO93073.1 - 0.039 14.5 0.8 7.6 7.1 0.1 2.5 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 RKO93073.1 - 0.044 13.1 0.3 2.6 7.3 0.1 2.3 2 0 0 2 2 2 0 Zeta toxin AAA_33 PF13671.6 RKO93073.1 - 0.08 13.1 0.8 4.7 7.4 0.1 2.9 3 0 0 3 3 2 0 AAA domain T2SSE PF00437.20 RKO93073.1 - 0.093 11.8 0.0 13 4.7 0.0 2.7 3 0 0 3 3 3 0 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 RKO93073.1 - 0.11 11.8 1.5 1.7 7.9 0.1 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family MeaB PF03308.16 RKO93073.1 - 0.12 11.3 0.1 3.1 6.7 0.0 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB SbcCD_C PF13558.6 RKO93073.1 - 0.16 12.3 0.5 7.9 6.8 0.0 3.0 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit RNA_helicase PF00910.22 RKO93073.1 - 0.19 12.2 0.1 16 5.9 0.0 2.6 2 0 0 2 2 2 0 RNA helicase IstB_IS21 PF01695.17 RKO93073.1 - 0.2 11.4 1.4 15 5.3 0.0 3.0 3 0 0 3 3 3 0 IstB-like ATP binding protein DUF815 PF05673.13 RKO93073.1 - 0.25 10.5 0.7 1.1 8.4 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF815) NB-ARC PF00931.22 RKO93073.1 - 0.95 8.6 2.0 3 7.0 0.2 2.2 2 0 0 2 2 2 0 NB-ARC domain Cpn60_TCP1 PF00118.24 RKO93074.1 - 2.8e-108 362.7 0.1 3.1e-108 362.5 0.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Pyr_redox_2 PF07992.14 RKO93074.1 - 0.0033 16.7 0.4 0.26 10.5 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase PNTB_4TM PF12769.7 RKO93074.1 - 0.032 14.7 0.0 1.4 9.4 0.0 2.4 2 0 0 2 2 2 0 4TM region of pyridine nucleotide transhydrogenase, mitoch ANAPC4_WD40 PF12894.7 RKO93075.1 - 5.1e-20 71.6 0.0 2.8e-19 69.2 0.0 2.1 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain ANAPC4 PF12896.7 RKO93075.1 - 2e-15 56.8 0.1 9.2e-10 38.4 0.0 2.2 2 0 0 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 4 WD40 PF00400.32 RKO93075.1 - 0.0029 18.4 0.3 0.33 11.9 0.0 3.5 3 0 0 3 3 3 1 WD domain, G-beta repeat Spc7 PF08317.11 RKO93075.1 - 0.055 12.3 0.1 0.12 11.2 0.1 1.5 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF5600 PF18150.1 RKO93075.1 - 0.16 12.6 0.0 0.35 11.5 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5600) Abhydrolase_3 PF07859.13 RKO93076.1 - 4.9e-39 134.4 0.0 6.5e-39 134.0 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 RKO93076.1 - 4.3e-07 29.1 0.0 7.2e-07 28.4 0.0 1.3 1 0 0 1 1 1 1 Steryl acetyl hydrolase GGACT PF06094.12 RKO93077.1 - 3.1e-14 53.6 0.5 1.7e-13 51.2 0.5 1.9 1 1 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like AIG2_2 PF13772.6 RKO93077.1 - 0.052 13.9 0.2 0.074 13.5 0.2 1.2 1 0 0 1 1 1 0 AIG2-like family FAM110_C PF14160.6 RKO93079.1 - 0.11 13.6 0.0 0.25 12.4 0.0 1.6 1 0 0 1 1 1 0 Centrosome-associated C terminus Syntaphilin PF15290.6 RKO93080.1 - 0.043 13.5 0.4 0.069 12.8 0.4 1.4 1 0 0 1 1 1 0 Golgi-localised syntaxin-1-binding clamp Phosphodiest PF01663.22 RKO93081.1 - 4e-16 59.5 0.6 1.2e-10 41.5 0.1 2.2 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase PetL PF05115.14 RKO93081.1 - 0.051 13.5 1.9 0.26 11.3 1.9 2.2 1 0 0 1 1 1 0 Cytochrome B6-F complex subunit VI (PetL) Pkinase PF00069.25 RKO93082.1 - 5e-70 235.9 0.0 5.7e-70 235.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO93082.1 - 9.6e-31 107.0 0.0 1.3e-30 106.6 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 RKO93082.1 - 4.2e-05 22.7 0.0 7.2e-05 21.9 0.0 1.3 1 1 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 RKO93082.1 - 0.001 18.5 0.0 0.0014 18.0 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 RKO93082.1 - 0.13 11.0 0.0 0.19 10.5 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 RKO93082.1 - 0.17 11.7 0.0 0.28 11.1 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family MATH PF00917.26 RKO93083.1 - 1e-06 28.9 0.0 0.059 13.5 0.0 2.9 3 0 0 3 3 3 2 MATH domain HOOK PF05622.12 RKO93083.1 - 0.0076 14.5 1.9 0.012 13.8 1.9 1.3 1 0 0 1 1 1 1 HOOK protein DUF2353 PF09789.9 RKO93083.1 - 0.067 12.6 2.7 0.94 8.8 2.4 2.1 2 0 0 2 2 2 0 Uncharacterized coiled-coil protein (DUF2353) Baculo_PEP_C PF04513.12 RKO93083.1 - 0.075 13.1 0.9 10 6.1 0.0 3.0 3 0 0 3 3 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus K-box PF01486.17 RKO93083.1 - 0.22 11.7 2.5 0.46 10.7 2.5 1.4 1 0 0 1 1 1 0 K-box region TMF_TATA_bd PF12325.8 RKO93083.1 - 0.4 10.9 10.6 0.048 13.9 4.1 2.5 3 0 0 3 3 2 0 TATA element modulatory factor 1 TATA binding ADIP PF11559.8 RKO93083.1 - 0.41 10.7 4.2 0.83 9.7 4.2 1.4 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding IFT57 PF10498.9 RKO93083.1 - 0.45 9.4 1.4 1 8.2 0.1 2.1 3 0 0 3 3 3 0 Intra-flagellar transport protein 57 DivIVA PF05103.13 RKO93083.1 - 0.7 10.0 6.2 0.94 9.6 3.9 2.4 2 1 0 2 2 2 0 DivIVA protein DUF1664 PF07889.12 RKO93083.1 - 0.85 9.7 2.0 12 5.9 0.5 3.1 2 1 2 4 4 4 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 RKO93083.1 - 2.1 7.2 8.1 0.15 10.9 2.1 2.1 2 1 0 2 2 2 0 Spc7 kinetochore protein Fez1 PF06818.15 RKO93083.1 - 2.7 8.4 7.1 5.4 7.4 3.2 2.4 2 0 0 2 2 2 0 Fez1 Tropomyosin PF00261.20 RKO93083.1 - 3.1 7.1 20.1 0.016 14.6 9.1 2.3 3 0 0 3 3 3 0 Tropomyosin Atg14 PF10186.9 RKO93083.1 - 3.9 6.5 4.8 2.3 7.2 1.9 1.8 1 1 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Filament PF00038.21 RKO93083.1 - 4.3 6.8 8.8 6.1 6.3 6.7 2.1 1 1 0 1 1 1 0 Intermediate filament protein HIP1_clath_bdg PF16515.5 RKO93083.1 - 4.8 7.9 6.9 0.96 10.1 1.0 2.9 2 1 1 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Leu_zip PF15294.6 RKO93083.1 - 7 6.1 6.7 3 7.3 2.5 2.1 2 1 0 2 2 2 0 Leucine zipper Cyt-b5 PF00173.28 RKO93086.1 - 0.006 16.7 0.0 0.016 15.4 0.0 1.6 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain ASH PF15780.5 RKO93087.1 - 4.1e-12 46.2 0.6 0.12 12.6 0.0 7.4 7 0 0 7 7 7 2 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin DUF1573 PF07610.11 RKO93087.1 - 2e-06 27.8 0.0 3.2 7.9 0.0 6.3 7 0 0 7 7 7 2 Protein of unknown function (DUF1573) PapD-like PF14874.6 RKO93087.1 - 3.6e-05 23.8 1.0 0.029 14.5 0.0 4.8 5 0 0 5 5 5 1 Flagellar-associated PapD-like DUF5001 PF16392.5 RKO93087.1 - 0.0012 18.8 0.0 10 6.1 0.0 4.8 5 0 0 5 5 5 2 Ig-like domain DUF1090 PF06476.12 RKO93087.1 - 0.24 11.6 2.1 0.45 10.6 2.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1090) HSP70 PF00012.20 RKO93088.1 - 1.2e-259 862.6 6.6 1.3e-259 862.4 6.6 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 RKO93088.1 - 3.9e-16 58.8 0.1 7.6e-15 54.5 0.0 2.1 2 0 0 2 2 2 1 MreB/Mbl protein FGGY_C PF02782.16 RKO93088.1 - 0.0041 16.9 0.0 0.018 14.7 0.0 2.1 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain Hydantoinase_A PF01968.18 RKO93088.1 - 0.0068 15.7 0.2 0.017 14.4 0.2 1.7 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase BcrAD_BadFG PF01869.20 RKO93088.1 - 0.013 15.0 0.1 4.2 6.8 0.0 2.5 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family Ppx-GppA PF02541.16 RKO93088.1 - 0.041 13.3 0.1 0.13 11.7 0.0 1.8 2 0 0 2 2 2 0 Ppx/GppA phosphatase family StbA PF06406.11 RKO93088.1 - 0.046 13.0 0.5 0.082 12.1 0.0 1.6 2 0 0 2 2 2 0 StbA protein MutS_III PF05192.18 RKO93088.1 - 1.3 9.2 4.1 5.4 7.2 0.7 2.6 2 1 0 2 2 2 0 MutS domain III Ribosomal_L27e PF01777.18 RKO93089.1 - 4.3e-37 126.3 4.8 6.8e-37 125.7 4.8 1.2 1 0 0 1 1 1 1 Ribosomal L27e protein family KOW PF00467.29 RKO93089.1 - 0.008 16.1 0.2 0.016 15.2 0.2 1.6 1 0 0 1 1 1 1 KOW motif Piwi PF02171.17 RKO93090.1 - 2.2e-107 358.8 0.0 2.9e-107 358.4 0.0 1.2 1 0 0 1 1 1 1 Piwi domain ArgoN PF16486.5 RKO93090.1 - 1.1e-29 103.8 0.0 2.5e-29 102.7 0.0 1.7 1 0 0 1 1 1 1 N-terminal domain of argonaute PAZ PF02170.22 RKO93090.1 - 1.6e-22 79.8 0.0 2.8e-22 79.0 0.0 1.4 1 0 0 1 1 1 1 PAZ domain ArgoL1 PF08699.10 RKO93090.1 - 1.2e-17 63.3 0.1 1.1e-16 60.2 0.0 2.4 2 0 0 2 2 2 1 Argonaute linker 1 domain ArgoMid PF16487.5 RKO93090.1 - 3.1e-12 46.6 0.0 7.5e-12 45.4 0.0 1.7 1 0 0 1 1 1 1 Mid domain of argonaute ArgoL2 PF16488.5 RKO93090.1 - 3.5e-11 43.3 0.0 7.9e-11 42.1 0.0 1.7 1 0 0 1 1 1 1 Argonaute linker 2 domain DUF2255 PF10012.9 RKO93091.1 - 0.072 13.2 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2255) CobD_Cbib PF03186.13 RKO93091.1 - 0.13 11.4 0.0 0.18 11.0 0.0 1.1 1 0 0 1 1 1 0 CobD/Cbib protein TusA PF01206.17 RKO93092.1 - 0.098 12.5 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Sulfurtransferase TusA TFIIS_M PF07500.14 RKO93093.1 - 2.5e-19 69.8 0.0 3.7e-19 69.3 0.0 1.3 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain ERCC4 PF02732.15 RKO93094.1 - 5.4e-13 49.4 0.0 2e-12 47.6 0.0 2.0 1 0 0 1 1 1 1 ERCC4 domain XRCC4 PF06632.12 RKO93094.1 - 0.00075 18.5 13.0 0.0013 17.7 13.0 1.3 1 0 0 1 1 1 1 DNA double-strand break repair and V(D)J recombination protein XRCC4 DUF874 PF05917.11 RKO93094.1 - 0.27 10.2 12.2 0.42 9.6 12.2 1.2 1 0 0 1 1 1 0 Helicobacter pylori protein of unknown function (DUF874) Atg14 PF10186.9 RKO93094.1 - 0.49 9.4 8.6 0.089 11.9 5.1 1.5 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 Nop14 PF04147.12 RKO93094.1 - 1.1 7.4 19.2 1.7 6.7 19.2 1.3 1 0 0 1 1 1 0 Nop14-like family Borrelia_P83 PF05262.11 RKO93094.1 - 1.5 7.2 16.9 2.4 6.5 16.9 1.2 1 0 0 1 1 1 0 Borrelia P83/100 protein Casc1 PF12366.8 RKO93094.1 - 1.7 8.1 6.0 2.9 7.4 6.0 1.3 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 VIR_N PF15912.5 RKO93094.1 - 2 8.0 9.5 3.6 7.1 9.5 1.4 1 0 0 1 1 1 0 Virilizer, N-terminal DUF853 PF05872.12 RKO93094.1 - 7.2 5.1 8.2 11 4.5 8.2 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) OmpH PF03938.14 RKO93094.1 - 7.4 6.9 22.4 0.97 9.8 16.9 2.2 3 0 0 3 3 3 0 Outer membrane protein (OmpH-like) BRCT_2 PF16589.5 RKO93095.1 - 8e-08 32.6 0.0 1.6e-07 31.6 0.0 1.6 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain Rap1_C PF11626.8 RKO93095.1 - 6.4e-05 23.0 0.2 0.00031 20.8 0.1 2.1 2 0 0 2 2 2 1 TRF2-interacting telomeric protein/Rap1 - C terminal domain Myb_DNA-bind_2 PF08914.11 RKO93095.1 - 0.0005 20.2 1.9 0.034 14.3 0.0 3.0 3 0 0 3 3 3 1 Rap1 Myb domain CRCB PF02537.15 RKO93097.1 - 1.2e-19 70.4 7.5 1.4e-19 70.1 7.5 1.1 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) Ribosomal_S3_C PF00189.20 RKO93098.1 - 1.6e-23 83.0 0.1 8e-23 80.8 0.1 1.9 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 RKO93098.1 - 1.9e-13 50.0 0.2 3.2e-13 49.3 0.2 1.4 1 0 0 1 1 1 1 KH domain UN_NPL4 PF11543.8 RKO93098.1 - 0.13 12.8 0.0 0.24 11.9 0.0 1.4 1 0 0 1 1 1 0 Nuclear pore localisation protein NPL4 Coilin_N PF15862.5 RKO93098.1 - 0.13 12.0 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 Coilin N-terminus FHA PF00498.26 RKO93099.1 - 1.7e-14 53.9 0.1 1.8e-14 53.8 0.1 1.0 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 RKO93099.1 - 9.8e-05 22.6 0.0 0.00012 22.3 0.0 1.1 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain ABC2_membrane PF01061.24 RKO93102.1 - 1.1e-38 132.8 20.2 2e-38 131.9 20.2 1.4 1 0 0 1 1 1 1 ABC-2 type transporter ABC_tran PF00005.27 RKO93102.1 - 1.1e-15 58.4 0.0 1.7e-15 57.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 RKO93102.1 - 0.00017 21.6 0.0 0.037 13.8 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC2_membrane_3 PF12698.7 RKO93102.1 - 0.0011 18.2 9.6 0.0016 17.6 9.6 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein PDR_CDR PF06422.12 RKO93102.1 - 0.0032 17.3 0.2 0.0032 17.3 0.2 2.2 2 0 0 2 2 2 1 CDR ABC transporter AAA_13 PF13166.6 RKO93102.1 - 0.23 10.1 0.1 2.2 6.8 0.0 2.0 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 RKO93102.1 - 0.3 11.0 0.6 0.53 10.2 0.6 1.4 1 0 0 1 1 1 0 RsgA GTPase ABC2_membrane_2 PF12679.7 RKO93102.1 - 0.42 9.8 6.5 0.8 8.9 6.5 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein Phosphodiest PF01663.22 RKO93104.1 - 5.1e-14 52.6 0.1 9.3e-14 51.8 0.1 1.4 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 RKO93104.1 - 0.0019 17.7 0.0 0.003 17.0 0.0 1.3 1 0 0 1 1 1 1 Sulfatase Metalloenzyme PF01676.18 RKO93104.1 - 0.02 14.3 0.3 0.034 13.5 0.3 1.3 1 0 0 1 1 1 0 Metalloenzyme superfamily PglZ PF08665.12 RKO93104.1 - 0.25 11.4 0.2 21 5.2 0.0 2.4 2 0 0 2 2 2 0 PglZ domain PT-VENN PF04829.13 RKO93104.1 - 0.98 9.6 3.4 3.1 7.9 3.4 2.0 1 0 0 1 1 1 0 Pre-toxin domain with VENN motif OrfB_Zn_ribbon PF07282.11 RKO93107.1 - 0.021 14.7 0.0 0.021 14.7 0.0 2.2 3 0 0 3 3 3 0 Putative transposase DNA-binding domain DUF4201 PF13870.6 RKO93108.1 - 4.3e-29 101.5 15.5 4.3e-29 101.5 15.5 2.7 2 1 0 2 2 2 1 Domain of unknown function (DUF4201) DUF496 PF04363.12 RKO93108.1 - 0.0044 17.0 2.2 0.0044 17.0 2.2 2.6 2 1 0 2 2 2 1 Protein of unknown function (DUF496) Holin_BhlA PF10960.8 RKO93108.1 - 7 6.7 10.5 9.9 6.2 0.3 2.6 2 0 0 2 2 2 0 BhlA holin family AATase PF07247.12 RKO93109.1 - 0.001 17.7 0.0 0.59 8.6 0.0 2.1 2 0 0 2 2 2 2 Alcohol acetyltransferase VWA_2 PF13519.6 RKO93110.1 - 7.5e-11 42.6 0.2 2.5e-10 40.9 0.0 2.0 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA PF00092.28 RKO93110.1 - 2.6e-09 37.6 0.1 1.7e-08 34.9 0.0 2.2 2 0 0 2 2 2 1 von Willebrand factor type A domain ANAPC1 PF12859.7 RKO93110.1 - 0.13 12.8 5.9 0.29 11.7 5.9 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 1 SOG2 PF10428.9 RKO93110.1 - 0.15 11.3 15.5 0.22 10.7 15.5 1.2 1 0 0 1 1 1 0 RAM signalling pathway protein Macoilin PF09726.9 RKO93110.1 - 1.9 7.0 4.4 2.5 6.6 4.4 1.1 1 0 0 1 1 1 0 Macoilin family DHHC PF01529.20 RKO93113.1 - 4.1e-30 104.6 5.8 4.7e-30 104.4 5.8 1.0 1 0 0 1 1 1 1 DHHC palmitoyltransferase ADH_N PF08240.12 RKO93113.1 - 0.058 13.3 0.8 0.063 13.2 0.8 1.3 1 0 0 1 1 1 0 Alcohol dehydrogenase GroES-like domain Myosin_head PF00063.21 RKO93119.1 - 3.4e-254 845.2 0.1 3.4e-254 845.2 0.1 2.0 2 0 0 2 2 2 1 Myosin head (motor domain) DIL PF01843.19 RKO93119.1 - 1e-30 106.0 2.7 3e-30 104.5 1.8 2.4 2 0 0 2 2 2 1 DIL domain IQ PF00612.27 RKO93119.1 - 2.1e-14 51.9 46.0 4e-06 26.1 0.8 6.7 6 0 0 6 6 6 5 IQ calmodulin-binding motif Fib_alpha PF08702.10 RKO93119.1 - 0.021 15.0 3.4 0.045 14.0 2.2 2.3 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family AAA_16 PF13191.6 RKO93119.1 - 0.036 14.4 0.0 0.32 11.3 0.0 2.6 2 0 0 2 2 2 0 AAA ATPase domain AAA_22 PF13401.6 RKO93119.1 - 0.04 14.2 0.0 0.27 11.5 0.0 2.4 2 0 0 2 2 2 0 AAA domain Myosin_N PF02736.19 RKO93119.1 - 0.073 12.9 0.1 0.17 11.8 0.1 1.6 1 0 0 1 1 1 0 Myosin N-terminal SH3-like domain Baculo_PEP_C PF04513.12 RKO93119.1 - 0.17 11.9 1.8 0.46 10.5 0.6 2.3 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 RKO93119.1 - 1.2 9.2 9.1 8.2 6.5 1.7 3.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Spectrin PF00435.21 RKO93119.1 - 2.1 8.9 9.8 1.5 9.4 5.9 2.8 1 1 1 2 2 2 0 Spectrin repeat SlyX PF04102.12 RKO93119.1 - 2.5 8.8 4.9 18 6.0 0.2 4.2 2 1 1 3 3 3 0 SlyX ZapB PF06005.12 RKO93119.1 - 4.5 7.8 17.6 0.18 12.2 5.6 4.1 2 1 0 2 2 2 0 Cell division protein ZapB GIT_CC PF16559.5 RKO93119.1 - 8.1 6.4 7.8 19 5.2 0.0 3.5 3 0 0 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor Ribosomal_S27e PF01667.17 RKO93120.1 - 7.3e-29 99.3 2.9 8.8e-29 99.0 2.9 1.1 1 0 0 1 1 1 1 Ribosomal protein S27 TF_Zn_Ribbon PF08271.12 RKO93120.1 - 0.027 14.0 0.5 0.04 13.4 0.5 1.2 1 0 0 1 1 1 0 TFIIB zinc-binding DUF4464 PF14713.6 RKO93121.1 - 7.6e-49 166.3 0.8 8.4e-49 166.1 0.8 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4464) F-box-like PF12937.7 RKO93122.1 - 3.1e-05 23.8 0.2 8.7e-05 22.3 0.2 1.9 1 0 0 1 1 1 1 F-box-like LodA_N PF17990.1 RKO93123.1 - 0.16 11.9 1.9 1.7 8.6 1.9 2.0 1 1 0 1 1 1 0 L-Lysine epsilon oxidase N-terminal ESPR PF13018.6 RKO93123.1 - 1.1 9.1 5.4 62 3.5 0.1 3.2 3 0 0 3 3 3 0 Extended Signal Peptide of Type V secretion system APC_r PF05923.12 RKO93126.1 - 0.022 14.5 2.5 0.65 9.8 0.2 3.5 3 0 0 3 3 3 0 APC repeat CAP PF00188.26 RKO93127.1 - 3.5e-12 47.2 0.4 3.9e-12 47.1 0.4 1.0 1 0 0 1 1 1 1 Cysteine-rich secretory protein family Peptidase_S8 PF00082.22 RKO93128.1 - 1.8e-38 132.5 4.4 2.2e-38 132.2 4.4 1.1 1 0 0 1 1 1 1 Subtilase family APG9 PF04109.16 RKO93129.1 - 1.7e-102 343.9 12.1 2e-102 343.7 12.1 1.0 1 0 0 1 1 1 1 Autophagy protein Apg9 DMT_YdcZ PF04657.13 RKO93129.1 - 0.021 15.1 0.6 0.021 15.1 0.6 1.8 2 0 0 2 2 2 0 Putative inner membrane exporter, YdcZ DUF2207 PF09972.9 RKO93129.1 - 0.77 8.5 5.5 0.28 9.9 1.0 2.2 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) Cation_ATPase_C PF00689.21 RKO93131.1 - 1.8e-07 31.1 0.4 2.5e-07 30.6 0.4 1.1 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus DUF1275 PF06912.11 RKO93131.1 - 0.0032 17.4 0.2 0.004 17.1 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) Phage_holin_2_3 PF16080.5 RKO93131.1 - 0.11 12.3 0.1 0.21 11.4 0.1 1.4 1 0 0 1 1 1 0 Bacteriophage holin family HP1 DUF4780 PF16012.5 RKO93134.1 - 0.025 14.0 0.0 0.038 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4780) MFS_1 PF07690.16 RKO93135.1 - 4.7e-06 25.8 15.5 0.00039 19.4 1.5 2.5 2 1 1 3 3 3 2 Major Facilitator Superfamily VWA_CoxE PF05762.14 RKO93135.1 - 0.13 11.6 1.1 0.21 11.0 1.1 1.2 1 0 0 1 1 1 0 VWA domain containing CoxE-like protein DUF1772 PF08592.11 RKO93135.1 - 0.24 11.7 9.0 34 4.8 4.8 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF1772) RskA PF10099.9 RKO93135.1 - 3 8.1 6.7 0.76 10.0 0.1 2.4 2 1 0 2 2 2 0 Anti-sigma-K factor rskA ACC_central PF08326.12 RKO93138.1 - 1e-191 639.0 0.0 1.3e-191 638.6 0.0 1.1 1 0 0 1 1 1 1 Acetyl-CoA carboxylase, central region Carboxyl_trans PF01039.22 RKO93138.1 - 3.1e-166 553.9 0.0 4e-166 553.5 0.0 1.1 1 0 0 1 1 1 1 Carboxyl transferase domain CPSase_L_D2 PF02786.17 RKO93138.1 - 1.7e-54 184.6 0.0 3.5e-54 183.5 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 RKO93138.1 - 1.9e-28 99.2 0.1 6.6e-28 97.5 0.0 2.1 2 0 0 2 2 2 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 RKO93138.1 - 2.7e-19 69.3 0.0 1.6e-18 66.8 0.0 2.2 2 0 0 2 2 2 1 Biotin carboxylase C-terminal domain Biotin_lipoyl PF00364.22 RKO93138.1 - 9.4e-12 44.6 0.0 2.1e-11 43.5 0.0 1.7 1 0 0 1 1 1 1 Biotin-requiring enzyme ATP-grasp_3 PF02655.14 RKO93138.1 - 0.0027 17.8 0.0 0.0078 16.3 0.0 1.7 2 0 0 2 2 2 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 RKO93138.1 - 0.017 14.6 0.0 0.038 13.5 0.0 1.5 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus RWD PF05773.22 RKO93141.1 - 8.9e-18 64.7 0.0 1.3e-17 64.2 0.0 1.2 1 0 0 1 1 1 1 RWD domain DFRP_C PF16543.5 RKO93141.1 - 0.0011 19.4 0.2 0.0045 17.4 0.1 2.1 1 1 0 1 1 1 1 DRG Family Regulatory Proteins, Tma46 Peroxidase_2 PF01328.17 RKO93141.1 - 0.13 12.8 0.0 0.2 12.2 0.0 1.3 1 0 0 1 1 1 0 Peroxidase, family 2 UPRTase PF14681.6 RKO93142.1 - 2.1e-48 164.5 0.1 2.1e-48 164.5 0.1 1.3 2 0 0 2 2 2 1 Uracil phosphoribosyltransferase CH PF00307.31 RKO93143.1 - 2.8e-33 114.3 0.3 2.3e-12 47.0 0.0 4.3 4 0 0 4 4 4 4 Calponin homology (CH) domain zf-C2H2_2 PF12756.7 RKO93144.1 - 1.8e-37 127.7 7.9 3.2e-30 104.4 0.3 3.4 2 1 0 3 3 3 3 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 RKO93144.1 - 3.1e-08 33.7 7.3 1.5e-06 28.3 2.2 3.5 4 0 0 4 4 4 2 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 RKO93144.1 - 4.9e-07 29.9 7.1 8.5e-06 26.0 1.7 2.8 2 0 0 2 2 2 2 Zinc-finger of C2H2 type DUF4674 PF15719.5 RKO93144.1 - 0.046 13.8 2.8 0.083 12.9 2.8 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4674) zf-C2H2_4 PF13894.6 RKO93144.1 - 0.14 13.0 18.0 0.68 10.9 0.1 5.0 5 0 0 5 5 5 0 C2H2-type zinc finger zf-DBF PF07535.12 RKO93144.1 - 1.5 9.0 5.8 0.27 11.4 0.5 2.5 2 0 0 2 2 2 0 DBF zinc finger DUF629 PF04780.12 RKO93144.1 - 3.7 6.0 8.2 5 5.5 0.0 3.5 3 1 1 4 4 4 0 Protein of unknown function (DUF629) Cytochrome_C7 PF14522.6 RKO93144.1 - 8.4 6.5 7.4 1.5e+02 2.5 0.1 3.2 2 1 0 2 2 2 0 Cytochrome c7 and related cytochrome c DOCK-C2 PF14429.6 RKO93145.1 - 1e-50 172.3 0.0 1.6e-50 171.7 0.0 1.3 1 0 0 1 1 1 1 C2 domain in Dock180 and Zizimin proteins DHR-2 PF06920.13 RKO93145.1 - 1.1e-50 172.8 0.0 8.6e-22 77.5 0.0 3.9 3 1 0 3 3 3 3 Dock homology region 2 DOCK_N PF16172.5 RKO93145.1 - 3.3e-25 88.8 0.0 4.9e-25 88.2 0.0 1.2 1 0 0 1 1 1 1 DOCK N-terminus Macoilin PF09726.9 RKO93147.1 - 5.8 5.3 12.5 6.8 5.1 12.5 1.0 1 0 0 1 1 1 0 Macoilin family LAP1C PF05609.12 RKO93147.1 - 8.5 5.3 19.2 11 5.0 19.2 1.1 1 0 0 1 1 1 0 Lamina-associated polypeptide 1C (LAP1C) ArsB PF02040.15 RKO93150.1 - 3e-14 53.2 14.4 2.8e-11 43.4 3.0 2.2 2 0 0 2 2 2 2 Arsenical pump membrane protein CitMHS PF03600.16 RKO93150.1 - 9.4e-09 34.9 26.4 2.2e-08 33.7 26.4 1.6 1 1 0 1 1 1 1 Citrate transporter Pex14_N PF04695.13 RKO93150.1 - 0.2 12.3 5.2 0.19 12.4 0.3 2.7 3 0 0 3 3 3 0 Peroxisomal membrane anchor protein (Pex14p) conserved region DUF676 PF05057.14 RKO93151.1 - 3.7e-11 43.0 0.0 5.6e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Lipase_3 PF01764.25 RKO93151.1 - 0.00032 20.6 0.1 0.00057 19.8 0.1 1.3 1 0 0 1 1 1 1 Lipase (class 3) PGAP1 PF07819.13 RKO93151.1 - 0.0096 15.7 0.0 0.015 15.0 0.0 1.2 1 0 0 1 1 1 1 PGAP1-like protein Abhydrolase_6 PF12697.7 RKO93151.1 - 6 7.4 11.1 15 6.1 10.9 1.9 1 1 0 1 1 1 0 Alpha/beta hydrolase family PB1 PF00564.24 RKO93152.1 - 2.7e-06 27.2 0.0 6.6e-06 26.0 0.0 1.6 1 0 0 1 1 1 1 PB1 domain DivIC PF04977.15 RKO93152.1 - 0.0011 18.7 0.2 0.01 15.6 0.6 2.4 2 0 0 2 2 2 1 Septum formation initiator TMF_DNA_bd PF12329.8 RKO93152.1 - 0.028 14.4 0.1 0.1 12.6 0.1 2.0 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding bZIP_1 PF00170.21 RKO93152.1 - 0.031 14.4 0.1 0.031 14.4 0.1 2.5 3 0 0 3 3 3 0 bZIP transcription factor CENP-F_leu_zip PF10473.9 RKO93152.1 - 0.21 11.6 1.9 0.26 11.3 0.2 2.1 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 YabA PF06156.13 RKO93152.1 - 0.21 12.2 0.2 0.79 10.4 0.2 2.0 1 0 0 1 1 1 0 Initiation control protein YabA Mito_carr PF00153.27 RKO93155.1 - 2.9e-19 68.8 0.6 7.8e-15 54.6 0.0 2.0 2 0 0 2 2 2 2 Mitochondrial carrier protein EutK_C PF16365.5 RKO93155.1 - 0.099 12.7 0.2 0.45 10.6 0.0 1.9 2 0 0 2 2 2 0 Ethanolamine utilization protein EutK C-terminus IPT PF01745.16 RKO93155.1 - 0.15 11.5 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 Isopentenyl transferase AAA PF00004.29 RKO93156.1 - 0.00043 20.7 0.0 0.00058 20.3 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Kelch_4 PF13418.6 RKO93157.1 - 2.2e-07 30.8 8.2 0.0096 15.9 0.1 4.8 5 0 0 5 5 5 2 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO93157.1 - 0.00012 22.2 7.0 0.064 13.6 0.0 4.4 4 0 0 4 4 4 1 Kelch motif Kelch_3 PF13415.6 RKO93157.1 - 0.00072 19.8 13.8 0.012 15.8 0.4 4.7 5 1 0 5 5 5 2 Galactose oxidase, central domain Kelch_2 PF07646.15 RKO93157.1 - 0.007 16.3 2.9 0.17 11.9 0.0 3.7 4 0 0 4 4 4 1 Kelch motif Kelch_1 PF01344.25 RKO93157.1 - 0.012 15.2 0.1 0.012 15.2 0.1 2.8 3 0 0 3 3 3 0 Kelch motif SH3_9 PF14604.6 RKO93157.1 - 0.019 14.8 0.0 0.049 13.5 0.0 1.7 2 0 0 2 2 2 0 Variant SH3 domain SH3_1 PF00018.28 RKO93157.1 - 0.08 12.6 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 SH3 domain Kelch_5 PF13854.6 RKO93157.1 - 0.51 10.4 5.0 3.2 7.9 0.5 3.7 3 0 0 3 3 3 0 Kelch motif AAA PF00004.29 RKO93158.1 - 9.2e-41 139.4 0.0 1.2e-40 139.0 0.0 1.1 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 RKO93158.1 - 1.1e-06 29.1 0.2 0.0018 18.6 0.1 2.9 1 1 2 3 3 3 1 AAA ATPase domain AAA_lid_3 PF17862.1 RKO93158.1 - 2.6e-05 23.9 0.4 5.6e-05 22.9 0.0 1.8 2 0 0 2 2 1 1 AAA+ lid domain AAA_5 PF07728.14 RKO93158.1 - 8.4e-05 22.6 0.2 0.00084 19.3 0.2 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 RKO93158.1 - 0.00041 20.6 0.1 0.035 14.4 0.1 2.3 1 1 1 2 2 2 1 AAA domain NACHT PF05729.12 RKO93158.1 - 0.003 17.5 0.1 0.02 14.8 0.1 2.0 2 0 0 2 2 2 1 NACHT domain AAA_14 PF13173.6 RKO93158.1 - 0.0044 17.1 0.0 0.0067 16.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 RKO93158.1 - 0.0047 17.4 0.0 0.0093 16.5 0.0 1.4 1 1 0 1 1 1 1 ABC transporter ATPase_2 PF01637.18 RKO93158.1 - 0.006 16.5 0.0 0.0088 16.0 0.0 1.4 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea TIP49 PF06068.13 RKO93158.1 - 0.0073 15.5 0.0 0.01 15.1 0.0 1.2 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_2 PF07724.14 RKO93158.1 - 0.0075 16.4 0.0 0.013 15.7 0.0 1.4 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) RNA_helicase PF00910.22 RKO93158.1 - 0.011 16.1 0.1 0.021 15.2 0.1 1.4 1 0 0 1 1 1 0 RNA helicase DUF815 PF05673.13 RKO93158.1 - 0.014 14.5 0.0 0.022 13.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) TsaE PF02367.17 RKO93158.1 - 0.019 14.9 0.0 0.03 14.3 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Adeno_IVa2 PF02456.15 RKO93158.1 - 0.036 12.9 0.0 0.047 12.5 0.0 1.1 1 0 0 1 1 1 0 Adenovirus IVa2 protein Mg_chelatase PF01078.21 RKO93158.1 - 0.041 13.3 0.2 0.088 12.2 0.2 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 RKO93158.1 - 0.047 13.9 0.1 0.14 12.4 0.0 1.8 1 1 1 2 2 2 0 AAA domain AAA_7 PF12775.7 RKO93158.1 - 0.059 12.9 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_25 PF13481.6 RKO93158.1 - 0.06 12.9 0.3 0.21 11.1 0.3 2.0 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 RKO93158.1 - 0.067 12.9 0.0 0.14 11.9 0.0 1.5 2 0 0 2 2 1 0 IstB-like ATP binding protein AAA_24 PF13479.6 RKO93158.1 - 0.11 12.2 0.1 0.22 11.2 0.0 1.5 2 0 0 2 2 1 0 AAA domain AAA_18 PF13238.6 RKO93158.1 - 0.11 13.0 0.1 0.16 12.5 0.1 1.4 1 1 0 1 1 1 0 AAA domain TniB PF05621.11 RKO93158.1 - 0.12 11.8 0.0 0.46 9.9 0.0 1.9 3 0 0 3 3 3 0 Bacterial TniB protein Sigma54_activat PF00158.26 RKO93158.1 - 0.12 12.1 0.1 0.42 10.3 0.1 1.9 1 1 0 1 1 1 0 Sigma-54 interaction domain SRPRB PF09439.10 RKO93158.1 - 0.12 11.7 0.0 0.2 11.0 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_33 PF13671.6 RKO93158.1 - 0.14 12.4 0.1 0.19 11.9 0.1 1.4 1 1 0 1 1 1 0 AAA domain Guanylate_kin PF00625.21 RKO93158.1 - 0.14 11.9 0.0 4.9 6.8 0.0 2.3 1 1 1 2 2 2 0 Guanylate kinase AAA_29 PF13555.6 RKO93158.1 - 0.14 11.9 0.0 0.25 11.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Rad17 PF03215.15 RKO93158.1 - 0.15 11.9 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain RsgA_GTPase PF03193.16 RKO93158.1 - 0.16 11.9 0.1 0.35 10.8 0.1 1.6 2 0 0 2 2 1 0 RsgA GTPase AFG1_ATPase PF03969.16 RKO93158.1 - 0.19 10.6 0.1 0.41 9.5 0.0 1.5 2 0 0 2 2 2 0 AFG1-like ATPase Hydrolase_2 PF07486.12 RKO93159.1 - 0.09 13.6 0.1 17 6.3 0.0 2.4 2 0 0 2 2 2 0 Cell Wall Hydrolase PNGaseA PF12222.8 RKO93160.1 - 9e-48 163.2 0.0 7.4e-31 107.5 0.0 2.0 2 0 0 2 2 2 2 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A zf-CCHC_2 PF13696.6 RKO93161.1 - 3.4e-21 74.7 21.3 5.6e-07 29.3 0.6 3.5 3 0 0 3 3 3 3 Zinc knuckle zf-CCHC_3 PF13917.6 RKO93161.1 - 2.9e-06 27.1 18.5 0.00077 19.4 1.7 3.5 2 1 1 3 3 3 3 Zinc knuckle eIF3g PF12353.8 RKO93161.1 - 0.053 13.9 13.6 1 9.8 2.9 3.3 2 1 1 3 3 3 0 Eukaryotic translation initiation factor 3 subunit G zf-CCHC_4 PF14392.6 RKO93161.1 - 0.83 9.4 11.6 12 5.7 0.4 3.3 3 0 0 3 3 3 0 Zinc knuckle Sporozoite_P67 PF05642.11 RKO93161.1 - 1.9 6.5 12.7 2.7 5.9 12.7 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen zf-CCHC PF00098.23 RKO93161.1 - 2.5 8.3 17.5 0.29 11.3 0.4 3.8 4 0 0 4 4 4 0 Zinc knuckle IML1 PF12257.8 RKO93162.1 - 5.4e-119 396.5 0.0 7.3e-119 396.1 0.0 1.2 1 0 0 1 1 1 1 Vacuolar membrane-associated protein Iml1 DEP PF00610.21 RKO93162.1 - 7e-24 83.7 0.2 1.4e-23 82.8 0.2 1.5 1 0 0 1 1 1 1 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) Whi5 PF08528.11 RKO93163.1 - 0.018 14.6 0.2 0.043 13.4 0.2 1.6 1 0 0 1 1 1 0 Whi5 like FtsL PF04999.13 RKO93164.1 - 2.1 8.4 5.3 3.9 7.5 5.3 1.4 1 0 0 1 1 1 0 Cell division protein FtsL DUF2428 PF10350.9 RKO93165.1 - 2.6e-10 40.0 0.0 5.6e-10 38.9 0.0 1.6 1 1 0 1 1 1 1 Putative death-receptor fusion protein (DUF2428) HEAT_EZ PF13513.6 RKO93165.1 - 0.47 11.0 9.8 0.2 12.2 0.2 5.1 6 0 0 6 6 6 0 HEAT-like repeat KicB PF03882.14 RKO93167.1 - 0.19 12.0 0.4 0.4 10.9 0.4 1.4 1 0 0 1 1 1 0 MukF winged-helix domain Zn_clus PF00172.18 RKO93168.1 - 6.3e-09 35.8 12.2 1.4e-08 34.7 12.2 1.6 1 0 0 1 1 1 1 Fungal Zn(2)-Cys(6) binuclear cluster domain Fungal_trans PF04082.18 RKO93168.1 - 4.8e-07 29.1 1.9 7.5e-07 28.4 1.9 1.2 1 0 0 1 1 1 1 Fungal specific transcription factor domain NDC10_II PF16787.5 RKO93169.1 - 9e-07 28.2 0.0 0.0017 17.4 0.2 2.1 1 1 0 2 2 2 2 Centromere DNA-binding protein complex CBF3 subunit, domain 2 NOA36 PF06524.12 RKO93169.1 - 5.6 6.2 16.5 8 5.7 16.5 1.1 1 0 0 1 1 1 0 NOA36 protein CDC45 PF02724.14 RKO93169.1 - 6.9 4.8 7.3 8.6 4.5 7.3 1.1 1 0 0 1 1 1 0 CDC45-like protein LRR_6 PF13516.6 RKO93170.1 - 0.0021 18.0 0.7 5.1 7.4 0.0 3.3 2 1 1 3 3 3 2 Leucine Rich repeat F-box-like PF12937.7 RKO93171.1 - 7.6e-06 25.7 1.3 7.6e-06 25.7 1.3 2.7 3 0 0 3 3 3 1 F-box-like F-box PF00646.33 RKO93171.1 - 0.35 10.8 4.2 2.8 7.9 1.0 2.7 2 0 0 2 2 2 0 F-box domain LRR_4 PF12799.7 RKO93171.1 - 2.8 8.5 8.0 36 5.0 0.0 4.2 5 1 0 5 5 5 0 Leucine Rich repeats (2 copies) UQ_con PF00179.26 RKO93172.1 - 3.8e-42 143.3 0.0 1e-41 141.9 0.0 1.6 1 1 0 1 1 1 1 Ubiquitin-conjugating enzyme PPP4R2 PF09184.11 RKO93172.1 - 0.0072 15.9 12.1 0.008 15.8 12.1 1.2 1 0 0 1 1 1 1 PPP4R2 Merozoite_SPAM PF07133.11 RKO93172.1 - 1.2 9.1 26.3 11 6.0 27.5 1.7 2 0 0 2 2 2 0 Merozoite surface protein (SPAM) NOA36 PF06524.12 RKO93172.1 - 2.4 7.4 20.4 3.1 7.1 20.4 1.2 1 0 0 1 1 1 0 NOA36 protein SDA1 PF05285.12 RKO93172.1 - 8.7 5.7 17.1 10 5.4 17.1 1.1 1 0 0 1 1 1 0 SDA1 Ribonuc_2-5A PF06479.12 RKO93174.1 - 1.1e-48 164.6 0.0 2e-48 163.8 0.0 1.4 1 0 0 1 1 1 1 Ribonuclease 2-5A Pkinase PF00069.25 RKO93174.1 - 2.1e-36 125.7 0.0 4.7e-36 124.5 0.0 1.5 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO93174.1 - 1.7e-19 70.1 0.0 2.5e-19 69.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO93174.1 - 3.8e-05 22.6 0.0 0.0004 19.3 0.0 2.0 2 0 0 2 2 2 1 Fungal protein kinase Na_Ca_ex PF01699.24 RKO93175.1 - 2.1e-18 66.7 40.6 4.2e-14 52.7 16.5 3.1 2 1 1 3 3 3 2 Sodium/calcium exchanger protein YccF PF03733.13 RKO93175.1 - 3.3e-08 34.1 8.8 3.3e-08 34.1 8.8 4.9 6 0 0 6 6 6 2 Inner membrane component domain KNOX2 PF03791.13 RKO93176.1 - 0.07 12.6 0.0 0.51 9.9 0.0 2.2 2 0 0 2 2 2 0 KNOX2 domain Peptidase_S51 PF03575.17 RKO93176.1 - 0.17 11.5 0.0 0.26 10.9 0.0 1.3 1 0 0 1 1 1 0 Peptidase family S51 COQ9 PF08511.11 RKO93180.1 - 3.7e-33 113.1 0.0 5.5e-33 112.6 0.0 1.3 1 0 0 1 1 1 1 COQ9 UPF0203 PF05254.12 RKO93181.1 - 5.6e-23 81.0 5.5 6.1e-23 80.9 5.5 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0203) COX17 PF05051.13 RKO93181.1 - 0.0034 17.7 0.7 0.011 16.1 0.7 1.7 1 1 0 1 1 1 1 Cytochrome C oxidase copper chaperone (COX17) UCR_hinge PF02320.16 RKO93181.1 - 0.0079 16.4 2.9 0.069 13.4 2.9 2.0 1 1 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein CX9C PF16860.5 RKO93181.1 - 0.061 13.3 1.3 4.6 7.3 0.0 2.1 2 0 0 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, DUF5339 PF17274.2 RKO93181.1 - 0.063 14.1 5.8 1.6 9.7 0.8 2.8 2 1 0 2 2 2 0 Family of unknown function (DUF5339) Cmc1 PF08583.10 RKO93181.1 - 0.13 12.3 4.3 0.51 10.4 4.3 1.9 1 1 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like RhoGAP PF00620.27 RKO93184.1 - 5.9e-15 55.4 0.0 8.9e-11 41.8 0.0 2.7 3 0 0 3 3 3 2 RhoGAP domain Exo_endo_phos PF03372.23 RKO93184.1 - 3.4e-11 43.1 0.0 6.4e-11 42.2 0.0 1.5 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Motile_Sperm PF00635.26 RKO93184.1 - 0.0047 16.8 0.1 0.0091 15.8 0.1 1.4 1 0 0 1 1 1 1 MSP (Major sperm protein) domain HTH_29 PF13551.6 RKO93184.1 - 0.097 12.7 0.0 0.33 11.0 0.0 1.9 1 0 0 1 1 1 0 Winged helix-turn helix DNA_topoisoIV PF00521.20 RKO93185.1 - 2.7e-131 438.4 0.0 3.9e-131 437.9 0.0 1.2 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A TOPRIM_C PF16898.5 RKO93185.1 - 1.2e-49 167.8 0.2 1.2e-49 167.8 0.2 2.1 2 0 0 2 2 2 1 C-terminal associated domain of TOPRIM DNA_gyraseB PF00204.25 RKO93185.1 - 1.9e-24 86.1 1.2 3.8e-24 85.1 1.2 1.5 1 0 0 1 1 1 1 DNA gyrase B HATPase_c PF02518.26 RKO93185.1 - 2.5e-15 57.0 0.6 1e-14 55.0 0.1 2.3 3 0 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 RKO93185.1 - 9.2e-08 32.3 0.0 2.8e-07 30.7 0.0 1.9 1 0 0 1 1 1 1 Toprim domain OB_MalK PF17912.1 RKO93185.1 - 0.097 13.5 0.1 0.52 11.2 0.0 2.3 2 0 0 2 2 2 0 MalK OB fold domain DUF908 PF06012.12 RKO93186.1 - 2.7e-71 240.9 2.5 5e-37 128.1 0.6 2.0 1 1 1 2 2 2 2 Domain of Unknown Function (DUF908) FCD PF07729.12 RKO93186.1 - 0.069 13.6 0.0 0.13 12.6 0.0 1.5 1 0 0 1 1 1 0 FCD domain ATP_bind_3 PF01171.20 RKO93187.1 - 9.4e-19 67.9 0.0 1.4e-18 67.3 0.0 1.3 1 0 0 1 1 1 1 PP-loop family zn-ribbon_14 PF16503.5 RKO93187.1 - 2.1e-18 65.5 10.8 6.1e-17 60.8 4.3 3.5 3 0 0 3 3 3 2 Zinc-ribbon tRNA_Me_trans PF03054.16 RKO93187.1 - 0.022 13.6 0.0 0.032 13.0 0.0 1.3 1 0 0 1 1 1 0 tRNA methyl transferase PAPS_reduct PF01507.19 RKO93187.1 - 0.035 14.1 0.0 0.047 13.7 0.0 1.3 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family RecR PF02132.15 RKO93187.1 - 0.085 12.4 0.5 0.085 12.4 0.5 2.8 4 0 0 4 4 4 0 RecR protein zf-UBR PF02207.20 RKO93187.1 - 0.53 10.5 3.8 8.1 6.7 0.2 2.4 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) dCMP_cyt_deam_1 PF00383.23 RKO93188.1 - 1.3e-12 47.5 0.7 1.8e-12 47.0 0.7 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 RKO93188.1 - 4.3e-08 33.0 0.2 7.9e-08 32.2 0.2 1.4 1 1 0 1 1 1 1 MafB19-like deaminase Cid2 PF09774.9 RKO93189.1 - 5.1e-08 33.5 1.2 2.3e-05 24.9 0.8 2.2 2 0 0 2 2 2 2 Caffeine-induced death protein 2 DUF1143 PF06608.11 RKO93192.1 - 0.011 15.8 0.2 0.023 14.7 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1143) Glyco_hydro_6 PF01341.17 RKO93193.1 - 7.7e-37 127.6 0.0 9.4e-37 127.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 6 Reticulon PF02453.17 RKO93194.1 - 1.6e-17 63.9 2.9 1.9e-17 63.6 2.9 1.1 1 0 0 1 1 1 1 Reticulon RGS PF00615.19 RKO93195.1 - 7.3e-56 187.5 0.0 2.6e-18 66.4 0.0 3.4 3 0 0 3 3 3 3 Regulator of G protein signaling domain DEP PF00610.21 RKO93195.1 - 3.2e-15 55.9 0.0 6e-11 42.2 0.0 2.8 3 0 0 3 3 3 2 Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) ABC2_membrane PF01061.24 RKO93196.1 - 9.8e-38 129.7 15.7 1.3e-37 129.3 15.7 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC_tran PF00005.27 RKO93196.1 - 2.9e-15 57.0 0.0 4.9e-15 56.2 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC2_membrane_3 PF12698.7 RKO93196.1 - 9.5e-05 21.7 8.7 9.5e-05 21.7 8.7 2.0 2 0 0 2 2 2 1 ABC-2 family transporter protein Pox_A9 PF04835.12 RKO93196.1 - 0.025 14.7 0.9 0.31 11.2 0.1 2.5 2 0 0 2 2 2 0 A9 protein conserved region DUF2681 PF10883.8 RKO93198.1 - 0.021 15.2 0.8 0.062 13.7 0.8 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2681) Leu_zip PF15294.6 RKO93198.1 - 0.031 13.8 1.9 0.05 13.1 1.9 1.4 1 0 0 1 1 1 0 Leucine zipper TetR_C_36 PF18598.1 RKO93198.1 - 0.033 14.1 1.6 0.11 12.4 1.6 1.9 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Golgin_A5 PF09787.9 RKO93198.1 - 4.9 6.5 9.0 4.3 6.7 7.7 1.5 1 1 0 1 1 1 0 Golgin subfamily A member 5 ELO PF01151.18 RKO93200.1 - 7.8e-55 186.1 17.6 9.8e-55 185.8 17.6 1.0 1 0 0 1 1 1 1 GNS1/SUR4 family UTP15_C PF09384.10 RKO93200.1 - 0.15 11.7 0.1 0.28 10.8 0.1 1.4 1 0 0 1 1 1 0 UTP15 C terminal Mon1 PF03164.14 RKO93202.1 - 5.4e-61 206.9 0.1 7.3e-61 206.4 0.1 1.0 1 0 0 1 1 1 1 Trafficking protein Mon1 Cation_ATPase_C PF00689.21 RKO93204.1 - 5.4e-30 104.5 2.9 1.4e-29 103.1 2.9 1.7 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 RKO93204.1 - 7.5e-22 78.7 0.1 6.4e-12 46.2 0.0 2.5 1 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 RKO93204.1 - 4.4e-17 61.9 0.0 8.1e-17 61.1 0.0 1.4 1 0 0 1 1 1 1 Cation transport ATPase (P-type) E1-E2_ATPase PF00122.20 RKO93204.1 - 5e-12 45.7 0.6 5e-12 45.7 0.6 2.4 3 0 0 3 3 3 1 E1-E2 ATPase Hydrolase_3 PF08282.12 RKO93204.1 - 1.4e-06 28.2 0.6 3.1e-06 27.1 0.6 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 RKO93204.1 - 0.0013 19.2 0.0 0.3 11.5 0.0 2.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase DUF2165 PF09933.9 RKO93204.1 - 0.0081 16.2 2.8 0.063 13.3 0.5 2.4 2 0 0 2 2 2 1 Predicted small integral membrane protein (DUF2165) E1-E2_ATPase PF00122.20 RKO93205.1 - 1.5e-15 57.2 0.2 1.5e-15 57.2 0.2 2.0 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_N PF00690.26 RKO93205.1 - 3.7e-05 23.3 0.0 5.8e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Autophagy_N PF03986.13 RKO93207.1 - 1.2e-45 154.8 0.0 2.2e-45 154.0 0.0 1.5 1 1 0 1 1 1 1 Autophagocytosis associated protein (Atg3), N-terminal domain Autophagy_act_C PF03987.15 RKO93207.1 - 7.4e-19 68.1 1.3 1.3e-18 67.3 1.3 1.5 1 0 0 1 1 1 1 Autophagocytosis associated protein, active-site domain Autophagy_C PF10381.9 RKO93207.1 - 1.3e-12 47.0 0.8 2.3e-12 46.2 0.8 1.4 1 0 0 1 1 1 1 Autophagocytosis associated protein C-terminal DUF2680 PF10925.8 RKO93207.1 - 0.11 12.5 0.0 2 8.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2680) Mon1 PF03164.14 RKO93208.1 - 6.3e-65 219.8 0.0 2.5e-58 198.1 0.0 1.9 2 0 0 2 2 2 2 Trafficking protein Mon1 PACT_coil_coil PF10495.9 RKO93210.1 - 1.4e-16 60.8 0.1 3.1e-15 56.5 0.1 3.6 1 0 0 1 1 1 1 Pericentrin-AKAP-450 domain of centrosomal targeting protein Spc7 PF08317.11 RKO93210.1 - 0.001 18.1 12.6 0.001 18.1 12.6 16.7 6 3 9 18 18 18 8 Spc7 kinetochore protein DUF5530 PF17670.1 RKO93211.1 - 0.042 13.6 0.0 0.13 12.0 0.0 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5530) SQS_PSY PF00494.19 RKO93213.1 - 2.2e-36 125.8 0.0 2.8e-36 125.4 0.0 1.1 1 0 0 1 1 1 1 Squalene/phytoene synthase Tube PF17212.3 RKO93213.1 - 0.12 12.4 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Tail tubular protein EF-hand_1 PF00036.32 RKO93216.1 - 5.1e-11 41.3 1.0 3.9e-07 29.2 0.1 2.3 2 1 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 RKO93216.1 - 4.9e-09 35.9 3.1 1.7e-06 27.8 0.2 2.1 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 RKO93216.1 - 2.2e-08 33.4 0.1 8e-06 25.4 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_7 PF13499.6 RKO93216.1 - 2.7e-07 30.9 0.1 3.4e-07 30.6 0.1 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_5 PF13202.6 RKO93216.1 - 0.00014 21.2 0.1 0.00073 18.9 0.0 2.1 1 1 1 2 2 2 1 EF hand EF-hand_9 PF14658.6 RKO93216.1 - 0.0014 18.9 0.0 0.0016 18.7 0.0 1.1 1 0 0 1 1 1 1 EF-hand domain DUF2789 PF10982.8 RKO93216.1 - 0.1 12.8 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2789) EF-hand_4 PF12763.7 RKO93216.1 - 0.11 12.4 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Cytoskeletal-regulatory complex EF hand DUF1811 PF08838.10 RKO93216.1 - 0.13 12.5 0.1 0.47 10.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1811) UPF0154 PF03672.13 RKO93216.1 - 0.13 12.3 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0154) F-box-like PF12937.7 RKO93217.1 - 0.0029 17.5 0.4 0.0029 17.5 0.4 2.0 2 0 0 2 2 2 1 F-box-like TPR_1 PF00515.28 RKO93221.1 - 4.1e-07 29.5 0.9 0.014 15.2 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 RKO93221.1 - 8.7e-07 28.6 2.7 0.0038 17.2 0.1 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 RKO93221.1 - 7e-05 23.4 6.3 0.00024 21.7 6.3 2.0 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_12 PF13424.6 RKO93221.1 - 0.0011 19.2 2.8 0.002 18.4 2.8 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 RKO93221.1 - 0.011 15.4 0.3 0.026 14.2 0.0 1.8 2 0 0 2 2 2 0 TPR repeat TPR_8 PF13181.6 RKO93221.1 - 0.16 12.2 0.1 7.8 7.0 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO93221.1 - 0.46 11.4 0.1 0.46 11.4 0.1 3.3 2 1 1 3 3 3 0 Tetratricopeptide repeat PPR_2 PF13041.6 RKO93223.1 - 6e-13 48.8 0.4 1.7e-06 28.1 0.3 6.6 8 1 0 8 8 8 2 PPR repeat family PPR_3 PF13812.6 RKO93223.1 - 1.4e-11 44.3 0.0 2.4e-07 30.7 0.1 5.0 5 0 0 5 5 5 1 Pentatricopeptide repeat domain PPR PF01535.20 RKO93223.1 - 5.3e-07 29.5 0.1 0.34 11.3 0.0 7.0 7 0 0 7 7 7 1 PPR repeat EnY2 PF10163.9 RKO93223.1 - 0.012 16.0 0.0 3.1 8.2 0.0 3.2 3 0 0 3 3 3 0 Transcription factor e(y)2 PPR_long PF17177.4 RKO93223.1 - 0.048 13.0 3.4 6.4 6.1 0.0 4.3 4 1 0 4 4 4 0 Pentacotripeptide-repeat region of PRORP GST_C_6 PF17171.4 RKO93223.1 - 0.12 12.2 0.4 30 4.5 0.0 3.9 4 0 0 4 4 4 0 Glutathione S-transferase, C-terminal domain Pkinase PF00069.25 RKO93224.1 - 1.8e-51 175.0 0.0 2.1e-51 174.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO93224.1 - 9.9e-26 90.6 0.0 1.3e-25 90.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 RKO93224.1 - 0.00037 20.5 0.0 0.75 9.7 0.0 2.7 2 1 0 3 3 3 2 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 RKO93224.1 - 0.0055 15.5 0.0 0.0089 14.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 RKO93224.1 - 0.016 14.8 0.2 0.045 13.4 0.1 1.6 1 1 1 2 2 2 0 RIO1 family Kdo PF06293.14 RKO93224.1 - 0.066 12.6 0.1 0.1 12.0 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Cyclophil_like2 PF18050.1 RKO93224.1 - 0.1 12.5 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 Cyclophilin-like family RecG_N PF17190.4 RKO93227.1 - 3.1 8.6 12.6 3.2 8.6 6.0 3.6 2 1 0 2 2 2 0 RecG N-terminal helical domain GAS PF13851.6 RKO93228.1 - 0.00031 20.1 19.3 0.00031 20.1 19.3 13.6 6 2 6 12 12 12 4 Growth-arrest specific micro-tubule binding TPR_MLP1_2 PF07926.12 RKO93228.1 - 0.0017 18.4 29.6 0.0017 18.4 29.6 14.8 7 3 7 15 15 15 7 TPR/MLP1/MLP2-like protein ZapB PF06005.12 RKO93228.1 - 0.0026 18.2 4.5 0.0026 18.2 4.5 19.6 9 4 6 15 15 15 4 Cell division protein ZapB DUF1771 PF08590.10 RKO93231.1 - 6.9e-11 42.4 8.0 6.9e-11 42.4 8.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1771) CUE PF02845.16 RKO93231.1 - 8.3e-10 38.2 2.1 0.0076 15.9 0.0 3.8 4 0 0 4 4 4 3 CUE domain DMA PF03474.14 RKO93231.1 - 4.4e-05 23.0 0.1 0.13 11.9 0.0 2.8 3 0 0 3 3 3 2 DMRTA motif Ribosomal_L28e PF01778.17 RKO93232.1 - 4.5e-09 37.1 1.3 5.9e-09 36.7 1.3 1.2 1 0 0 1 1 1 1 Ribosomal L28e protein family DUF3035 PF11233.8 RKO93233.1 - 0.075 13.3 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3035) SH3_9 PF14604.6 RKO93238.1 - 1.1e-60 201.3 16.8 1.3e-11 44.1 0.1 6.5 6 0 0 6 6 6 6 Variant SH3 domain SH3_2 PF07653.17 RKO93238.1 - 6.3e-52 173.1 11.2 8.2e-10 38.2 0.1 6.4 6 0 0 6 6 6 6 Variant SH3 domain SH3_1 PF00018.28 RKO93238.1 - 7.4e-47 156.7 22.6 1.7e-09 37.1 0.3 6.6 6 0 0 6 6 6 6 SH3 domain RhoGEF PF00621.20 RKO93238.1 - 4.9e-45 154.0 0.0 4.9e-45 154.0 0.0 3.6 3 0 0 3 3 3 1 RhoGEF domain PH PF00169.29 RKO93238.1 - 0.016 15.7 0.0 0.055 14.0 0.0 1.9 1 0 0 1 1 1 0 PH domain TrkA_C PF02080.21 RKO93238.1 - 0.12 12.2 2.3 22 5.0 0.0 3.9 4 0 0 4 4 4 0 TrkA-C domain PKcGMP_CC PF16808.5 RKO93238.1 - 0.14 12.0 8.1 1.4 8.8 1.2 4.0 3 0 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Dynamin_N PF00350.23 RKO93243.1 - 2.8e-09 37.2 0.6 4.6e-09 36.5 0.6 1.4 1 0 0 1 1 1 1 Dynamin family AAA_15 PF13175.6 RKO93243.1 - 0.026 14.2 0.1 0.037 13.7 0.1 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_16 PF13191.6 RKO93243.1 - 0.041 14.3 0.0 0.075 13.4 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_21 PF13304.6 RKO93243.1 - 0.076 12.8 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system RRM_1 PF00076.22 RKO93245.1 - 1.8e-09 37.3 0.3 2.2e-09 37.0 0.3 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 RKO93245.1 - 0.00028 20.8 0.1 0.00033 20.6 0.1 1.1 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif RRM_5 PF13893.6 RKO93245.1 - 0.012 15.2 0.0 0.012 15.2 0.0 1.1 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 RKO93245.1 - 0.13 12.4 0.1 0.14 12.2 0.1 1.1 1 0 0 1 1 1 0 RNA binding motif Aminotran_1_2 PF00155.21 RKO93246.1 - 3.5e-09 36.3 0.0 4.1e-09 36.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_1_2 PF00155.21 RKO93247.1 - 0.17 11.1 0.0 0.18 11.0 0.0 1.1 1 0 0 1 1 1 0 Aminotransferase class I and II DUF3785 PF12653.7 RKO93249.1 - 0.013 15.6 0.1 0.019 15.1 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3785) zf_C2H2_13 PF18508.1 RKO93249.1 - 0.11 12.1 0.8 0.29 10.8 0.8 1.7 1 0 0 1 1 1 0 Zinc finger domain ABC_tran PF00005.27 RKO93250.1 - 0.061 13.8 0.0 0.093 13.2 0.0 1.3 1 0 0 1 1 1 0 ABC transporter ATG7_N PF16420.5 RKO93251.1 - 1.8e-87 293.8 0.0 2e-87 293.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-like modifier-activating enzyme ATG7 N-terminus C2 PF00168.30 RKO93255.1 - 0.14 12.5 0.1 4.5 7.6 0.0 3.1 3 0 0 3 3 3 0 C2 domain LCCL PF03815.19 RKO93256.1 - 4.9e-17 61.8 0.0 1e-16 60.8 0.0 1.5 1 0 0 1 1 1 1 LCCL domain DEAD PF00270.29 RKO93257.1 - 1.3e-18 67.3 0.0 2.8e-18 66.3 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO93257.1 - 3.1e-16 59.7 0.0 5.7e-14 52.4 0.0 2.5 2 0 0 2 2 2 2 Helicase conserved C-terminal domain RecQ_Zn_bind PF16124.5 RKO93257.1 - 1.8e-05 25.3 0.1 4.7e-05 24.0 0.1 1.7 1 0 0 1 1 1 1 RecQ zinc-binding ResIII PF04851.15 RKO93257.1 - 0.0028 17.7 0.0 0.0049 16.9 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit TFIIA PF03153.13 RKO93258.1 - 1.3 8.9 7.8 2.1 8.3 7.8 1.2 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit PAS PF00989.25 RKO93260.1 - 4.1e-07 30.0 0.1 2.1e-06 27.7 0.0 2.3 2 1 0 2 2 2 1 PAS fold PAS_9 PF13426.7 RKO93260.1 - 9e-06 25.9 0.0 2.3e-05 24.6 0.0 1.7 1 0 0 1 1 1 1 PAS domain Pkinase PF00069.25 RKO93261.1 - 1e-66 225.0 0.0 1.1e-66 224.9 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO93261.1 - 1.1e-35 123.2 0.0 1.3e-35 123.0 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO93261.1 - 1.6e-07 31.0 0.0 6.5e-07 28.9 0.0 1.9 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 RKO93261.1 - 1.7e-05 24.3 0.1 2.5e-05 23.7 0.1 1.1 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 RKO93261.1 - 0.00013 21.6 0.2 0.00031 20.4 0.1 1.6 2 1 0 2 2 2 1 RIO1 family APH PF01636.23 RKO93261.1 - 0.00015 21.8 0.0 0.00019 21.4 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Haspin_kinase PF12330.8 RKO93261.1 - 0.0011 18.0 0.3 0.0013 17.7 0.3 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 RKO93261.1 - 0.019 13.8 0.0 0.027 13.3 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase Choline_kinase PF01633.20 RKO93261.1 - 0.022 14.3 0.1 0.032 13.8 0.1 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase Seadorna_VP7 PF07387.11 RKO93261.1 - 0.04 13.0 0.1 0.068 12.2 0.1 1.3 1 0 0 1 1 1 0 Seadornavirus VP7 FTA2 PF13095.6 RKO93261.1 - 0.042 13.5 0.0 0.14 11.7 0.0 1.7 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 YrbL-PhoP_reg PF10707.9 RKO93261.1 - 0.065 12.8 0.1 0.094 12.2 0.1 1.4 1 1 0 1 1 1 0 PhoP regulatory network protein YrbL Guanylate_cyc PF00211.20 RKO93262.1 - 1.1e-26 93.6 0.0 2.2e-26 92.6 0.0 1.5 1 1 1 2 2 2 1 Adenylate and Guanylate cyclase catalytic domain GTP_EFTU PF00009.27 RKO93263.1 - 3.7e-37 127.7 0.1 4.2e-37 127.6 0.1 1.0 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 RKO93263.1 - 3.2e-05 24.0 0.0 0.00025 21.1 0.0 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 RKO93263.1 - 0.045 13.2 0.0 0.086 12.3 0.0 1.4 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit HBS1_N PF08938.10 RKO93264.1 - 2.4e-07 31.0 3.1 7.6e-07 29.4 3.1 1.8 1 1 0 1 1 1 1 HBS1 N-terminus CUE PF02845.16 RKO93264.1 - 0.0026 17.4 0.0 0.0046 16.6 0.0 1.4 1 0 0 1 1 1 1 CUE domain KfrA_N PF11740.8 RKO93264.1 - 0.012 16.3 0.0 0.037 14.7 0.0 1.7 1 1 0 1 1 1 0 Plasmid replication region DNA-binding N-term UBA_4 PF14555.6 RKO93264.1 - 0.026 14.3 0.0 0.062 13.1 0.0 1.7 1 0 0 1 1 1 0 UBA-like domain DUF1296 PF06972.11 RKO93264.1 - 0.035 14.3 0.0 0.068 13.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1296) UBA PF00627.31 RKO93264.1 - 0.14 12.1 0.2 0.26 11.3 0.2 1.4 1 0 0 1 1 1 0 UBA/TS-N domain Vps39_2 PF10367.9 RKO93265.1 - 3.8e-24 85.2 0.2 1e-23 83.9 0.2 1.8 1 0 0 1 1 1 1 Vacuolar sorting protein 39 domain 2 Vps39_1 PF10366.9 RKO93265.1 - 1.3e-21 76.9 0.6 3.6e-20 72.3 0.0 3.3 2 1 1 3 3 3 1 Vacuolar sorting protein 39 domain 1 CNH PF00780.22 RKO93265.1 - 5.5e-13 49.2 0.0 3.8e-06 26.7 0.0 2.9 1 1 1 2 2 2 2 CNH domain Clathrin PF00637.20 RKO93265.1 - 4.5e-06 26.6 1.7 0.00049 20.0 0.3 3.4 3 0 0 3 3 3 1 Region in Clathrin and VPS TPR_16 PF13432.6 RKO93265.1 - 0.54 11.0 2.6 1 10.1 1.1 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat GTP_EFTU_D3 PF03143.17 RKO93266.1 - 4.7e-20 72.0 0.1 1.4e-19 70.5 0.2 1.7 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 RKO93266.1 - 2.6e-08 34.1 0.1 6.6e-08 32.8 0.1 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 Flavi_NS4B PF01349.17 RKO93266.1 - 0.086 12.2 0.1 0.12 11.8 0.1 1.2 1 0 0 1 1 1 0 Flavivirus non-structural protein NS4B GTP_EFTU PF00009.27 RKO93267.1 - 1.6e-58 197.4 0.0 7.3e-58 195.3 0.0 2.0 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 RKO93267.1 - 3.8e-15 55.7 0.0 1.1e-14 54.2 0.0 1.8 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 RKO93267.1 - 1e-11 45.0 0.0 3e-11 43.6 0.0 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_IV PF03764.18 RKO93267.1 - 5.7e-06 26.1 0.0 2.5e-05 24.0 0.0 2.1 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 RKO93267.1 - 0.0001 22.3 0.0 0.00023 21.2 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II MMR_HSR1 PF01926.23 RKO93267.1 - 0.012 15.7 0.0 0.048 13.8 0.0 2.1 2 0 0 2 2 2 0 50S ribosome-binding GTPase Condensation PF00668.20 RKO93268.1 - 2.9e-09 36.1 0.0 9.5e-08 31.1 0.0 2.8 2 1 0 2 2 2 1 Condensation domain Spc7 PF08317.11 RKO93268.1 - 0.0025 16.7 6.5 0.0038 16.2 2.3 2.1 2 0 0 2 2 2 1 Spc7 kinetochore protein DUF3450 PF11932.8 RKO93268.1 - 0.0031 16.9 3.4 0.0064 15.8 3.4 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) APG6_N PF17675.1 RKO93268.1 - 0.0045 17.5 2.5 0.011 16.3 2.5 1.6 1 0 0 1 1 1 1 Apg6 coiled-coil region TMF_TATA_bd PF12325.8 RKO93268.1 - 0.0098 16.1 1.5 0.0098 16.1 1.5 1.8 2 0 0 2 2 2 1 TATA element modulatory factor 1 TATA binding DUF2968 PF11180.8 RKO93268.1 - 0.022 14.4 1.6 0.041 13.5 1.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) YabA PF06156.13 RKO93268.1 - 0.13 13.0 0.3 0.38 11.4 0.0 1.8 2 0 0 2 2 2 0 Initiation control protein YabA CENP-F_leu_zip PF10473.9 RKO93268.1 - 0.19 11.7 6.8 0.36 10.8 3.2 2.3 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HALZ PF02183.18 RKO93268.1 - 0.25 11.6 3.6 0.18 12.0 1.5 1.9 1 1 1 2 2 2 0 Homeobox associated leucine zipper Spc24 PF08286.11 RKO93268.1 - 0.25 11.6 0.6 0.72 10.1 0.6 1.7 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 ZapB PF06005.12 RKO93268.1 - 0.28 11.6 3.6 0.79 10.2 3.6 1.7 1 0 0 1 1 1 0 Cell division protein ZapB ADIP PF11559.8 RKO93268.1 - 0.41 10.7 7.2 0.05 13.7 2.8 1.7 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding DUF3287 PF11690.8 RKO93268.1 - 0.53 10.0 2.4 3.8 7.2 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3287) Tropomyosin_1 PF12718.7 RKO93268.1 - 1.4 9.0 6.3 12 6.1 1.6 2.3 2 0 0 2 2 2 0 Tropomyosin like CLZ PF16526.5 RKO93268.1 - 1.9 8.9 5.4 3.7 8.0 1.3 3.2 4 0 0 4 4 4 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DivIC PF04977.15 RKO93268.1 - 3 7.7 8.8 0.2 11.5 3.1 2.0 2 0 0 2 2 2 0 Septum formation initiator BRE1 PF08647.11 RKO93268.1 - 4.2 7.5 6.9 2.1 8.5 2.3 2.2 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase RVP_2 PF08284.11 RKO93269.1 - 0.011 15.5 0.2 0.016 15.0 0.2 1.2 1 0 0 1 1 1 0 Retroviral aspartyl protease Asp_protease_2 PF13650.6 RKO93271.1 - 3e-06 27.8 0.0 9e-06 26.2 0.0 1.8 2 0 0 2 2 2 1 Aspartyl protease gag-asp_proteas PF13975.6 RKO93271.1 - 1.5e-05 25.5 0.0 3.8e-05 24.2 0.0 1.7 1 0 0 1 1 1 1 gag-polyprotein putative aspartyl protease zf-CCHC PF00098.23 RKO93271.1 - 4.1e-05 23.4 5.0 4.1e-05 23.4 5.0 1.9 2 0 0 2 2 2 1 Zinc knuckle zf-CCHC_3 PF13917.6 RKO93271.1 - 0.017 15.1 0.2 0.05 13.6 0.2 1.7 1 0 0 1 1 1 0 Zinc knuckle zf-CCHC_6 PF15288.6 RKO93271.1 - 0.023 14.5 1.2 0.057 13.3 1.2 1.7 1 0 0 1 1 1 0 Zinc knuckle F-box PF00646.33 RKO93272.1 - 0.014 15.3 2.3 0.015 15.1 0.1 2.2 2 0 0 2 2 2 0 F-box domain F-box-like PF12937.7 RKO93273.1 - 0.00025 20.9 4.9 0.00058 19.7 0.8 2.6 2 0 0 2 2 2 1 F-box-like LRR_6 PF13516.6 RKO93273.1 - 0.0068 16.4 0.9 0.047 13.7 0.3 2.5 2 0 0 2 2 2 1 Leucine Rich repeat HA1 PF18239.1 RKO93281.1 - 0.034 14.0 0.0 0.077 12.9 0.0 1.6 1 0 0 1 1 1 0 Hemagglutinin I Tubulin PF00091.25 RKO93284.1 - 1e-24 87.9 0.0 1.4e-24 87.4 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_2 PF13809.6 RKO93284.1 - 0.019 14.2 0.0 0.027 13.7 0.0 1.1 1 0 0 1 1 1 0 Tubulin like RRM_1 PF00076.22 RKO93285.1 - 7.2e-05 22.5 0.1 0.00018 21.2 0.0 1.7 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RSB_motif PF16294.5 RKO93285.1 - 7.5e-05 22.9 0.2 7.5e-05 22.9 0.2 6.8 3 1 2 5 5 5 1 RNSP1-SAP18 binding (RSB) motif SAP PF02037.27 RKO93285.1 - 0.0007 19.3 0.1 0.0018 18.0 0.1 1.8 1 0 0 1 1 1 1 SAP domain Kelch_6 PF13964.6 RKO93287.1 - 2.3e-14 53.1 8.2 4.5e-06 26.7 0.2 4.8 4 0 0 4 4 4 3 Kelch motif Kelch_4 PF13418.6 RKO93287.1 - 9.7e-14 51.1 9.3 1.7e-05 24.7 0.4 5.6 5 0 0 5 5 5 2 Galactose oxidase, central domain Kelch_2 PF07646.15 RKO93287.1 - 3.5e-11 42.6 3.9 0.00025 20.9 0.1 5.1 4 0 0 4 4 4 4 Kelch motif Kelch_5 PF13854.6 RKO93287.1 - 1.5e-10 40.8 2.7 0.019 15.0 0.1 5.3 5 0 0 5 5 5 4 Kelch motif Kelch_1 PF01344.25 RKO93287.1 - 3e-10 39.5 10.4 3.7e-06 26.4 0.1 5.5 6 0 0 6 6 6 2 Kelch motif Kelch_3 PF13415.6 RKO93287.1 - 9e-08 32.2 16.6 0.0041 17.4 0.2 6.1 6 0 0 6 6 6 3 Galactose oxidase, central domain WD40 PF00400.32 RKO93288.1 - 1.7e-15 57.1 11.1 0.00046 20.9 0.0 8.3 9 0 0 9 9 9 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO93288.1 - 5.9e-05 23.3 0.0 1.1 9.6 0.0 4.6 4 0 0 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 RKO93288.1 - 0.0048 15.9 0.1 0.099 11.6 0.0 2.8 3 0 0 3 3 3 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Glucodextran_B PF09136.10 RKO93288.1 - 0.014 15.8 0.5 0.038 14.4 0.5 1.8 1 0 0 1 1 1 0 Glucodextranase, domain B Tau95_N PF17682.1 RKO93288.1 - 0.13 12.4 4.6 0.58 10.4 4.6 2.1 1 0 0 1 1 1 0 Tau95 Triple barrel domain MFS_1 PF07690.16 RKO93289.1 - 3.5e-14 52.5 25.7 1.4e-08 34.0 12.9 2.6 1 1 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO93289.1 - 2.6e-08 33.1 2.8 0.00035 19.6 0.0 2.3 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 RKO93289.1 - 2.9e-06 26.4 0.0 0.021 13.7 0.0 2.3 1 1 1 2 2 2 2 MFS_1 like family ATG22 PF11700.8 RKO93289.1 - 0.098 11.3 4.2 0.053 12.1 0.3 2.3 2 1 0 2 2 2 0 Vacuole effluxer Atg22 like AMP-binding PF00501.28 RKO93292.1 - 4.5e-15 55.2 0.0 5.8e-15 54.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme DUF4203 PF13886.6 RKO93293.1 - 3.1e-37 128.2 37.8 4.5e-37 127.7 37.8 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) Trp_oprn_chp PF09534.10 RKO93293.1 - 0.1 12.4 4.0 0.59 9.9 4.0 2.3 1 1 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) LMBR1 PF04791.16 RKO93294.1 - 0.014 14.3 0.0 0.014 14.3 0.0 4.7 2 1 3 5 5 5 0 LMBR1-like membrane protein DAO PF01266.24 RKO93295.1 - 5.6e-31 108.4 0.0 6.7e-31 108.1 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 RKO93295.1 - 2.9e-05 24.2 0.5 0.00045 20.4 0.2 2.8 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 RKO93295.1 - 8.7e-05 22.9 0.0 0.00017 22.0 0.0 1.6 1 0 0 1 1 1 1 Putative NAD(P)-binding FAD_binding_3 PF01494.19 RKO93295.1 - 0.00027 20.3 0.1 0.00047 19.5 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain FAD_binding_2 PF00890.24 RKO93295.1 - 0.00032 19.9 0.8 0.0006 19.0 0.4 1.6 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 RKO93295.1 - 0.00067 19.0 0.0 0.002 17.4 0.1 1.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 RKO93295.1 - 0.0097 16.5 0.2 0.029 14.9 0.1 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 RKO93295.1 - 0.12 11.6 0.1 0.21 10.8 0.1 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_3 PF13738.6 RKO93295.1 - 0.19 10.9 0.1 0.33 10.2 0.1 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Thymopoietin PF08198.11 RKO93296.1 - 0.0066 16.0 0.0 0.013 15.1 0.0 1.5 1 0 0 1 1 1 1 Thymopoietin protein tRNA-synt_2_TM PF16995.5 RKO93296.1 - 0.014 15.1 0.0 0.027 14.2 0.0 1.4 1 0 0 1 1 1 0 Transmembrane region of lysyl-tRNA synthetase CDC45 PF02724.14 RKO93296.1 - 1.1 7.5 2.9 1.6 6.9 2.9 1.2 1 0 0 1 1 1 0 CDC45-like protein Lin-8 PF03353.15 RKO93296.1 - 1.7 8.1 3.9 3.1 7.3 3.9 1.3 1 0 0 1 1 1 0 Ras-mediated vulval-induction antagonist FCH PF00611.23 RKO93297.1 - 2.8e-15 56.3 1.6 3.4e-15 56.1 1.6 1.1 1 0 0 1 1 1 1 Fes/CIP4, and EFC/F-BAR homology domain FAM184 PF15665.5 RKO93297.1 - 0.0036 17.1 1.0 0.0041 16.9 1.0 1.1 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B KBP_C PF12309.8 RKO93297.1 - 0.014 14.9 0.3 0.015 14.9 0.3 1.0 1 0 0 1 1 1 0 KIF-1 binding protein C terminal CTK3 PF12243.8 RKO93297.1 - 0.043 13.8 0.0 0.049 13.6 0.0 1.1 1 0 0 1 1 1 0 CTD kinase subunit gamma CTK3 PhaC_N PF07167.13 RKO93297.1 - 0.066 12.9 0.1 0.074 12.7 0.1 1.0 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FSIP1 PF15554.6 RKO93297.1 - 0.067 12.3 1.3 0.078 12.1 1.3 1.0 1 0 0 1 1 1 0 FSIP1 family DUF553 PF04473.12 RKO93297.1 - 0.12 11.9 0.0 0.17 11.4 0.0 1.3 1 0 0 1 1 1 0 Transglutaminase-like domain Adhesin_P1_N PF18652.1 RKO93297.1 - 0.12 12.4 0.7 0.25 11.4 0.6 1.6 1 1 0 1 1 1 0 Adhesin P1 N-terminal domain SH3_1 PF00018.28 RKO93298.1 - 1.1e-13 50.6 0.1 1.8e-13 49.8 0.1 1.4 1 0 0 1 1 1 1 SH3 domain SH3_9 PF14604.6 RKO93298.1 - 2.1e-07 30.7 0.0 3.5e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_2 PF07653.17 RKO93298.1 - 2.4e-06 27.1 0.0 4.1e-06 26.4 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_3 PF08239.11 RKO93298.1 - 0.00011 22.4 0.0 0.00021 21.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial SH3 domain Mit_KHE1 PF10173.9 RKO93298.1 - 0.072 13.2 0.3 0.18 11.9 0.0 1.9 2 0 0 2 2 2 0 Mitochondrial K+-H+ exchange-related Neuropep_like PF15161.6 RKO93298.1 - 0.11 12.1 0.1 0.23 11.2 0.1 1.4 1 0 0 1 1 1 0 Neuropeptide-like CAP_N PF01213.19 RKO93298.1 - 0.21 11.0 5.0 0.46 9.9 5.0 1.5 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Connexin40_C PF16791.5 RKO93298.1 - 1.4 10.2 5.0 0.69 11.2 0.6 2.5 3 0 0 3 3 3 0 Connexin 40 C-terminal domain HSF_DNA-bind PF00447.17 RKO93299.1 - 1.3e-31 109.1 2.2 1.4e-31 108.9 2.2 1.0 1 0 0 1 1 1 1 HSF-type DNA-binding Ets PF00178.22 RKO93299.1 - 0.0038 17.7 0.0 0.0051 17.3 0.0 1.3 1 0 0 1 1 1 1 Ets-domain DUF4141 PF13605.6 RKO93299.1 - 0.18 11.1 0.0 0.26 10.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4141) Cpn60_TCP1 PF00118.24 RKO93300.1 - 1.4e-155 518.7 16.4 1.5e-155 518.6 16.4 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family VID27 PF08553.10 RKO93301.1 - 3.4e-155 516.5 2.0 3.4e-155 516.5 2.0 1.8 2 0 0 2 2 2 1 VID27 C-terminal WD40-like domain VID27_N PF17748.1 RKO93301.1 - 4.1e-49 166.7 0.0 4.1e-49 166.7 0.0 4.3 3 1 1 4 4 4 2 VID27 N-terminal region VID27_PH PF17747.1 RKO93301.1 - 2.5e-22 79.2 0.1 5.5e-21 74.9 0.0 2.6 2 0 0 2 2 2 1 VID27 PH-like domain DUF883 PF05957.13 RKO93302.1 - 0.0054 17.3 17.6 0.012 16.2 2.8 3.0 3 0 0 3 3 3 2 Bacterial protein of unknown function (DUF883) YtxH PF12732.7 RKO93302.1 - 0.015 15.8 20.7 3.7 8.2 4.2 3.6 1 1 1 2 2 2 0 YtxH-like protein ApoLp-III PF07464.11 RKO93302.1 - 0.019 15.1 4.4 1.1 9.3 1.9 2.4 1 1 1 2 2 2 0 Apolipophorin-III precursor (apoLp-III) DUF4455 PF14643.6 RKO93302.1 - 0.087 11.5 0.1 0.26 9.9 0.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4455) ISG65-75 PF11727.8 RKO93302.1 - 0.11 11.8 15.7 0.066 12.4 5.2 2.3 1 1 1 2 2 2 0 Invariant surface glycoprotein Apolipoprotein PF01442.18 RKO93302.1 - 0.11 12.4 17.0 0.047 13.6 10.7 2.7 2 1 0 2 2 2 0 Apolipoprotein A1/A4/E domain HisKA_3 PF07730.13 RKO93302.1 - 0.69 10.5 6.2 7.1 7.2 1.7 3.1 2 1 0 2 2 2 0 Histidine kinase Mobilization_B PF17511.2 RKO93302.1 - 1.3 9.4 15.4 2.2 8.7 2.1 2.8 1 1 1 2 2 2 0 Mobilization protein B ATP-synt_B PF00430.18 RKO93302.1 - 3.2 7.9 15.7 5.9 7.0 6.9 2.5 2 0 0 2 2 2 0 ATP synthase B/B' CF(0) RRF PF01765.19 RKO93302.1 - 5.1 7.0 7.2 2 8.4 2.2 2.3 2 0 0 2 2 2 0 Ribosome recycling factor DUF4449 PF14613.6 RKO93302.1 - 9.9 6.2 8.3 5.1 7.2 2.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4449) zf-MYND PF01753.18 RKO93303.1 - 5.9e-11 42.3 10.2 1.3e-10 41.2 10.2 1.6 1 0 0 1 1 1 1 MYND finger DCB PF16213.5 RKO93303.1 - 2.3e-05 24.2 0.0 3.5e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Dimerisation and cyclophilin-binding domain of Mon2 zf-C6H2 PF15801.5 RKO93303.1 - 0.033 14.5 2.7 0.067 13.5 2.7 1.5 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding RNA_lig_T4_1 PF09511.10 RKO93304.1 - 0.00024 21.0 0.0 0.00032 20.6 0.0 1.2 1 0 0 1 1 1 1 RNA ligase GIY-YIG PF01541.24 RKO93305.1 - 0.002 18.4 0.1 0.018 15.3 0.1 2.7 2 0 0 2 2 2 1 GIY-YIG catalytic domain T5orf172 PF10544.9 RKO93305.1 - 0.089 13.3 0.2 0.089 13.3 0.2 3.1 3 0 0 3 3 3 0 T5orf172 domain MUG113 PF13455.6 RKO93305.1 - 0.12 13.1 0.4 0.83 10.4 0.1 2.7 2 1 0 2 2 2 0 Meiotically up-regulated gene 113 Capsid_N PF16903.5 RKO93306.1 - 9.7e-58 195.2 0.0 1.4e-57 194.7 0.0 1.2 1 0 0 1 1 1 1 Major capsid protein N-terminus Capsid_NCLDV PF04451.12 RKO93306.1 - 8e-47 159.6 0.4 1.4e-46 158.8 0.4 1.4 1 0 0 1 1 1 1 Large eukaryotic DNA virus major capsid protein HNH_3 PF13392.6 RKO93307.1 - 7.5e-05 22.4 1.3 7.5e-05 22.4 1.3 3.0 3 0 0 3 3 3 2 HNH endonuclease AP2 PF00847.20 RKO93307.1 - 0.0076 16.5 3.2 0.014 15.6 0.2 2.5 2 0 0 2 2 2 1 AP2 domain DSHCT PF08148.12 RKO93308.1 - 3.2e-48 163.5 0.2 3.7e-48 163.3 0.2 1.0 1 0 0 1 1 1 1 DSHCT (NUC185) domain RCDG1 PF15725.5 RKO93309.1 - 0.05 14.0 0.7 0.068 13.6 0.7 1.3 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein BTB_2 PF02214.22 RKO93310.1 - 1.6e-09 38.0 0.0 4.6e-09 36.5 0.0 1.7 2 0 0 2 2 2 1 BTB/POZ domain INPP5B_PH PF16776.5 RKO93311.1 - 0.05 13.3 0.4 0.069 12.9 0.4 1.2 1 0 0 1 1 1 0 Type II inositol 1,4,5-trisphosphate 5-phosphatase PH domain TSC22 PF01166.18 RKO93311.1 - 0.31 11.4 3.6 4.1 7.8 0.1 2.4 2 1 1 3 3 3 0 TSC-22/dip/bun family APG6_N PF17675.1 RKO93311.1 - 4.6 7.8 12.0 20 5.7 11.9 1.8 1 1 0 1 1 1 0 Apg6 coiled-coil region PIF1 PF05970.14 RKO93312.1 - 3.8e-23 82.3 0.0 3.4e-21 75.8 0.0 2.1 2 0 0 2 2 2 2 PIF1-like helicase Herpes_Helicase PF02689.14 RKO93312.1 - 0.0011 17.0 0.0 0.0017 16.4 0.0 1.1 1 0 0 1 1 1 1 Helicase UvrD_C_2 PF13538.6 RKO93312.1 - 0.012 15.4 0.0 0.033 14.0 0.0 1.8 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain FAD_binding_4 PF01565.23 RKO93313.1 - 1.6e-18 66.8 5.8 3.3e-18 65.7 5.8 1.6 1 0 0 1 1 1 1 FAD binding domain BHD_3 PF10405.9 RKO93314.1 - 9.8e-29 99.6 0.0 1.8e-28 98.7 0.0 1.5 1 0 0 1 1 1 1 Rad4 beta-hairpin domain 3 Rad4 PF03835.15 RKO93314.1 - 1.3e-25 89.8 0.0 2.2e-25 89.1 0.0 1.3 1 0 0 1 1 1 1 Rad4 transglutaminase-like domain BHD_1 PF10403.9 RKO93314.1 - 2.9e-17 62.2 0.1 1.3e-15 56.9 0.0 2.5 2 0 0 2 2 2 1 Rad4 beta-hairpin domain 1 BHD_2 PF10404.9 RKO93314.1 - 1.4e-13 51.5 0.1 1.4e-13 51.5 0.1 2.5 3 0 0 3 3 3 1 Rad4 beta-hairpin domain 2 Transglut_core PF01841.19 RKO93314.1 - 0.087 13.3 0.0 0.3 11.6 0.0 2.0 1 1 0 1 1 1 0 Transglutaminase-like superfamily Lipoprotein_21 PF14041.6 RKO93314.1 - 0.097 12.8 0.0 0.23 11.6 0.0 1.6 1 0 0 1 1 1 0 LppP/LprE lipoprotein YqfQ PF14181.6 RKO93315.1 - 0.39 10.9 4.9 0.4 10.9 4.9 1.2 1 0 0 1 1 1 0 YqfQ-like protein AIP3 PF03915.13 RKO93317.1 - 1.6e-34 119.7 0.0 1.7e-34 119.6 0.0 1.0 1 0 0 1 1 1 1 Actin interacting protein 3 PLRV_ORF5 PF01690.17 RKO93318.1 - 0.049 12.3 0.5 0.071 11.8 0.5 1.2 1 0 0 1 1 1 0 Potato leaf roll virus readthrough protein CHASE3 PF05227.13 RKO93318.1 - 8 6.4 7.5 3.6 7.5 0.6 3.3 3 0 0 3 3 3 0 CHASE3 domain Myb_DNA-binding PF00249.31 RKO93319.1 - 2.5e-07 30.8 0.1 4.2e-07 30.0 0.1 1.4 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO93319.1 - 1.7e-05 25.0 1.0 3.2e-05 24.1 1.0 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain tRNA_NucTran2_2 PF13735.6 RKO93319.1 - 0.33 10.9 0.8 0.75 9.8 0.4 1.8 2 0 0 2 2 2 0 tRNA nucleotidyltransferase domain 2 putative FHA PF00498.26 RKO93320.1 - 3.5e-10 40.1 0.0 7.5e-10 39.0 0.0 1.5 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 RKO93320.1 - 5.6e-05 23.4 0.0 0.00073 19.8 0.0 3.0 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain PP1_bind PF15276.6 RKO93320.1 - 0.0031 17.8 3.9 0.0041 17.4 0.3 3.2 2 0 0 2 2 2 1 Protein phosphatase 1 binding Bactofilin PF04519.13 RKO93320.1 - 0.13 12.6 4.5 10 6.5 0.1 4.3 2 2 2 4 4 4 0 Polymer-forming cytoskeletal Clathrin PF00637.20 RKO93321.1 - 0.00094 19.1 0.0 0.016 15.1 0.0 2.6 2 0 0 2 2 2 1 Region in Clathrin and VPS WD40 PF00400.32 RKO93321.1 - 0.13 13.1 0.1 0.47 11.4 0.1 1.9 1 0 0 1 1 1 0 WD domain, G-beta repeat WD40_like PF17005.5 RKO93321.1 - 0.18 11.1 0.0 3 7.1 0.0 2.1 2 0 0 2 2 2 0 WD40-like domain SRPRB PF09439.10 RKO93322.1 - 4.3e-30 104.5 0.0 6.1e-30 104.0 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Arf PF00025.21 RKO93322.1 - 2.8e-10 39.9 0.0 4.6e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 RKO93322.1 - 3.1e-05 23.6 0.0 4.6e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 RKO93322.1 - 0.0038 16.6 0.0 0.0059 16.0 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region ATP_bind_1 PF03029.17 RKO93322.1 - 0.03 14.1 0.0 0.041 13.7 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein MT-A70 PF05063.14 RKO93324.1 - 8.9e-48 162.5 0.0 1.1e-47 162.1 0.0 1.1 1 0 0 1 1 1 1 MT-A70 DUF4407 PF14362.6 RKO93326.1 - 1 8.6 3.9 1.5 8.1 3.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Rod_C PF10493.9 RKO93327.1 - 1.1e-48 166.0 0.1 1.9e-48 165.2 0.1 1.3 1 0 0 1 1 1 1 Rough deal protein C-terminal region MRP-S22 PF10245.9 RKO93327.1 - 0.00031 20.6 0.3 0.0014 18.4 0.0 2.1 2 0 0 2 2 2 1 Mitochondrial 28S ribosomal protein S22 TPR_14 PF13428.6 RKO93327.1 - 0.15 13.0 1.8 14 6.8 0.1 4.5 4 0 0 4 4 4 0 Tetratricopeptide repeat Radial_spoke_3 PF06098.11 RKO93328.1 - 1.5e-116 388.7 11.6 1.5e-116 388.7 11.6 2.1 2 0 0 2 2 2 1 Radial spoke protein 3 Guanylate_cyc PF00211.20 RKO93328.1 - 2.9e-08 33.6 0.0 5e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain GAF PF01590.26 RKO93328.1 - 0.002 18.8 0.0 0.012 16.2 0.0 2.5 3 0 0 3 3 3 1 GAF domain WD40 PF00400.32 RKO93329.1 - 7.8e-14 51.9 10.3 0.025 15.5 0.0 7.0 6 0 0 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO93329.1 - 7.1e-05 23.0 0.0 0.0041 17.4 0.0 3.7 3 1 2 5 5 5 1 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 RKO93329.1 - 0.00062 18.8 0.0 0.0026 16.8 0.0 2.0 2 1 0 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein CDC45 PF02724.14 RKO93330.1 - 0.27 9.5 1.1 0.3 9.3 1.1 1.0 1 0 0 1 1 1 0 CDC45-like protein DUF5642 PF18702.1 RKO93331.1 - 0.029 14.1 0.5 0.062 13.1 0.3 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF5642) PMR5N PF14416.6 RKO93337.1 - 0.024 14.9 0.0 72 3.8 0.0 3.3 3 0 0 3 3 3 0 PMR5 N terminal Domain zf-C2H2 PF00096.26 RKO93339.1 - 1e-08 35.1 6.4 0.00068 19.9 2.9 2.5 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 RKO93339.1 - 3.7e-07 30.3 11.3 2.5e-06 27.7 0.8 2.3 2 1 0 2 2 2 2 Zinc-finger double domain zf-C2H2_4 PF13894.6 RKO93339.1 - 1.1e-06 29.0 9.4 0.00048 20.7 2.0 2.6 2 1 1 3 3 3 2 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 RKO93339.1 - 0.00019 21.6 0.1 0.036 14.4 0.0 2.3 1 1 1 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 RKO93339.1 - 0.0024 17.8 8.1 0.066 13.2 0.1 2.6 3 0 0 3 3 3 2 C2H2-type zinc finger C5HCH PF17982.1 RKO93339.1 - 0.0085 16.2 3.6 0.0085 16.2 3.6 2.2 1 1 0 2 2 2 1 NSD Cys-His rich domain ADK_lid PF05191.14 RKO93339.1 - 0.027 14.4 0.8 0.43 10.6 0.1 2.2 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-nanos PF05741.13 RKO93339.1 - 0.05 13.8 4.5 0.32 11.3 2.0 2.1 2 0 0 2 2 2 0 Nanos RNA binding domain DUF4543 PF15076.6 RKO93339.1 - 0.055 13.6 1.8 0.072 13.2 1.7 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4543) DZR PF12773.7 RKO93339.1 - 0.074 13.1 3.7 0.16 12.0 3.7 1.5 1 1 0 1 1 1 0 Double zinc ribbon TF_Zn_Ribbon PF08271.12 RKO93339.1 - 0.076 12.5 1.8 0.81 9.3 0.1 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding CpXC PF14353.6 RKO93339.1 - 0.15 12.1 1.5 1.6 8.8 0.1 1.9 1 1 1 2 2 2 0 CpXC protein zf-C2H2_11 PF16622.5 RKO93339.1 - 0.17 11.7 2.8 5.5 6.9 0.0 2.4 2 0 0 2 2 2 0 zinc-finger C2H2-type Zn-ribbon_8 PF09723.10 RKO93339.1 - 0.24 11.6 4.0 0.53 10.4 4.0 1.7 1 1 0 1 1 1 0 Zinc ribbon domain zf_UBZ PF18439.1 RKO93339.1 - 0.25 10.9 3.9 0.35 10.5 0.1 2.4 2 1 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Glyco_hydro_28 PF00295.17 RKO93340.1 - 6e-16 58.4 0.0 1.2e-15 57.4 0.0 1.5 1 1 0 1 1 1 1 Glycosyl hydrolases family 28 zf-P11 PF03854.14 RKO93341.1 - 0.082 12.6 0.0 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 P-11 zinc finger DSPc PF00782.20 RKO93342.1 - 0.0061 16.4 0.0 0.0068 16.2 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 RKO93342.1 - 0.034 13.7 0.0 0.042 13.4 0.0 1.1 1 0 0 1 1 1 0 Protein-tyrosine phosphatase LRR_8 PF13855.6 RKO93344.1 - 1.1e-26 92.3 61.1 2e-10 40.3 5.6 5.7 3 2 3 6 6 6 5 Leucine rich repeat LRR_4 PF12799.7 RKO93344.1 - 4.5e-15 55.5 51.5 6.2e-06 26.5 2.1 7.2 4 1 4 8 8 8 7 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 RKO93344.1 - 8.3e-06 25.7 46.9 0.073 13.7 0.5 10.2 8 1 1 9 9 9 5 Leucine Rich Repeat GRP PF07172.11 RKO93345.1 - 0.0031 18.2 17.7 0.0058 17.3 17.7 1.4 1 0 0 1 1 1 1 Glycine rich protein family DotA PF11388.8 RKO93345.1 - 0.023 14.9 0.0 0.061 13.5 0.0 1.6 1 0 0 1 1 1 0 Phagosome trafficking protein DotA DUF2853 PF11015.8 RKO93345.1 - 0.13 13.0 1.0 0.37 11.5 0.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2853) SRF-TF PF00319.18 RKO93347.1 - 1.1e-07 31.2 0.1 1.9e-07 30.4 0.1 1.4 1 0 0 1 1 1 1 SRF-type transcription factor (DNA-binding and dimerisation domain) Red1 PF07964.11 RKO93347.1 - 0.21 9.8 0.6 0.28 9.4 0.6 1.1 1 0 0 1 1 1 0 Rec10 / Red1 ABC_membrane PF00664.23 RKO93350.1 - 1.5e-35 123.2 8.3 1.9e-35 122.8 8.3 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 RKO93350.1 - 2e-34 119.1 0.0 3.7e-34 118.2 0.0 1.5 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 RKO93350.1 - 5.5e-08 32.5 0.1 3e-07 30.1 0.1 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 RKO93350.1 - 0.01 16.3 0.2 0.036 14.4 0.2 2.0 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 RKO93350.1 - 0.012 16.0 0.0 0.1 13.1 0.0 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 RKO93350.1 - 0.029 14.6 0.2 0.2 12.0 0.2 2.3 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 RKO93350.1 - 0.037 13.6 0.0 0.11 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 RKO93350.1 - 0.039 13.9 0.3 8.3 6.3 0.1 2.4 1 1 0 2 2 2 0 NTPase AAA_21 PF13304.6 RKO93350.1 - 0.056 13.3 0.4 0.23 11.3 0.1 1.9 1 1 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 RKO93350.1 - 0.091 12.7 0.0 0.21 11.5 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_5 PF07728.14 RKO93350.1 - 0.092 12.7 0.2 1.6 8.8 0.2 2.4 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_23 PF13476.6 RKO93350.1 - 0.11 13.0 0.0 0.22 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 RKO93350.1 - 0.12 12.6 0.3 3.4 8.0 0.3 2.7 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_29 PF13555.6 RKO93350.1 - 0.15 11.8 0.1 0.43 10.4 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 RKO93350.1 - 0.68 10.2 2.2 3.4 7.9 0.1 2.5 2 1 0 3 3 3 0 AAA domain MYCBPAP PF14646.6 RKO93357.1 - 2.5e-39 135.4 0.0 1e-38 133.5 0.0 1.9 2 1 0 2 2 2 1 MYCBP-associated protein family GIY-YIG PF01541.24 RKO93358.1 - 3.9e-17 62.3 0.0 6.9e-17 61.5 0.0 1.4 1 1 0 1 1 1 1 GIY-YIG catalytic domain FANCL_C PF11793.8 RKO93358.1 - 0.001 19.2 3.6 0.0023 18.1 3.6 1.6 1 0 0 1 1 1 1 FANCL C-terminal domain DUF3746 PF12562.8 RKO93358.1 - 0.017 15.0 0.2 0.034 14.0 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3746) Tmpp129 PF10272.9 RKO93358.1 - 0.15 11.3 8.1 0.23 10.7 8.1 1.3 1 0 0 1 1 1 0 Putative transmembrane protein precursor zf-RING_2 PF13639.6 RKO93358.1 - 2.8 8.4 10.3 15 6.0 10.3 2.1 1 1 0 1 1 1 0 Ring finger domain RPE65 PF03055.15 RKO93359.1 - 6e-79 266.4 0.0 1.5e-76 258.5 0.0 2.0 1 1 0 1 1 1 1 Retinal pigment epithelial membrane protein Helicase_C PF00271.31 RKO93360.1 - 7.4e-06 26.3 0.1 8.6e-06 26.1 0.1 1.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SPA PF08616.10 RKO93362.1 - 8.2e-35 119.2 0.0 1.5e-34 118.4 0.0 1.4 1 0 0 1 1 1 1 Stabilization of polarity axis Afi1 PF07792.12 RKO93362.1 - 3.5e-21 76.1 0.1 1.5e-20 74.0 0.0 1.9 1 1 1 2 2 2 1 Docking domain of Afi1 for Arf3 in vesicle trafficking Avl9 PF09794.9 RKO93362.1 - 1.7e-12 46.8 0.0 3.9e-05 22.5 0.0 2.9 3 0 0 3 3 3 2 Transport protein Avl9 DUF2347 PF09804.9 RKO93362.1 - 1.8e-05 24.5 0.0 0.061 12.9 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2347) Peptidase_M36 PF02128.15 RKO93364.1 - 7.9e-71 239.2 0.2 9.9e-71 238.8 0.2 1.1 1 0 0 1 1 1 1 Fungalysin metallopeptidase (M36) FTP PF07504.13 RKO93364.1 - 0.0028 17.4 0.5 0.007 16.2 0.5 1.7 1 0 0 1 1 1 1 Fungalysin/Thermolysin Propeptide Motif TauD PF02668.16 RKO93366.1 - 6e-34 118.1 0.0 7.7e-34 117.7 0.0 1.1 1 0 0 1 1 1 1 Taurine catabolism dioxygenase TauD, TfdA family TilS PF09179.11 RKO93366.1 - 0.05 14.1 0.8 1.9 9.0 0.2 2.4 2 0 0 2 2 2 0 TilS substrate binding domain F-box-like PF12937.7 RKO93368.1 - 0.05 13.5 0.2 16 5.5 0.0 2.5 2 0 0 2 2 2 0 F-box-like DUF3652 PF12372.8 RKO93368.1 - 0.17 11.8 0.6 1.5 8.7 0.1 2.5 2 0 0 2 2 2 0 Huntingtin protein region HR_lesion PF05514.11 RKO93370.1 - 0.065 13.4 0.0 0.38 10.9 0.0 2.0 2 0 0 2 2 2 0 HR-like lesion-inducing Colicin_V PF02674.16 RKO93374.1 - 0.016 15.2 1.1 0.077 13.0 0.1 2.3 2 0 0 2 2 2 0 Colicin V production protein zf-CCHC PF00098.23 RKO93376.1 - 7.8e-06 25.7 7.8 2.4e-05 24.2 5.1 2.2 2 0 0 2 2 2 1 Zinc knuckle TIG PF01833.24 RKO93379.1 - 4.7e-08 33.0 0.4 1.3e-07 31.6 0.4 1.8 1 0 0 1 1 1 1 IPT/TIG domain CUB PF00431.20 RKO93379.1 - 0.00029 21.1 0.0 0.00056 20.2 0.0 1.5 1 0 0 1 1 1 1 CUB domain LRR_4 PF12799.7 RKO93379.1 - 0.00033 21.0 9.6 0.0063 16.9 1.5 3.4 3 0 0 3 3 3 2 Leucine Rich repeats (2 copies) CFEM PF05730.11 RKO93379.1 - 0.037 14.1 3.3 0.11 12.6 3.3 1.9 1 0 0 1 1 1 0 CFEM domain LRR_8 PF13855.6 RKO93379.1 - 0.42 10.4 15.4 0.097 12.4 3.4 3.2 3 1 0 3 3 3 0 Leucine rich repeat hEGF PF12661.7 RKO93379.1 - 0.89 10.3 11.7 0.85 10.3 1.9 3.3 2 0 0 2 2 2 0 Human growth factor-like EGF TPR_1 PF00515.28 RKO93380.1 - 1.4e-11 43.6 1.0 0.0002 21.1 0.0 4.0 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 RKO93380.1 - 2.3e-09 36.6 6.8 0.035 14.2 0.1 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 RKO93380.1 - 7e-05 23.0 8.1 0.0017 18.6 1.8 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat Arm PF00514.23 RKO93380.1 - 0.0013 18.8 7.9 0.13 12.4 0.0 5.0 7 0 0 7 7 6 2 Armadillo/beta-catenin-like repeat TPR_8 PF13181.6 RKO93380.1 - 0.0038 17.3 1.0 4.6 7.7 0.1 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_11 PF13414.6 RKO93380.1 - 0.0079 15.9 0.8 4.6 7.0 0.0 4.1 4 0 0 4 4 4 1 TPR repeat TPR_9 PF13371.6 RKO93380.1 - 0.013 15.6 3.9 0.74 10.0 0.2 4.0 2 1 1 3 3 3 0 Tetratricopeptide repeat DUF3856 PF12968.7 RKO93380.1 - 0.032 14.3 2.3 0.035 14.2 0.4 2.0 2 0 0 2 2 2 0 Domain of Unknown Function (DUF3856) TPR_7 PF13176.6 RKO93380.1 - 0.086 12.9 0.8 7.1 6.9 0.0 3.6 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 RKO93380.1 - 0.14 12.9 2.7 4.5 8.1 0.5 3.5 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO93380.1 - 0.42 11.3 15.9 0.98 10.1 0.4 4.4 4 1 1 5 5 4 0 Tetratricopeptide repeat TPR_4 PF07721.14 RKO93380.1 - 1.5 9.7 6.6 1.1 10.0 0.4 4.1 3 0 0 3 3 3 0 Tetratricopeptide repeat Glyco_hydro_6 PF01341.17 RKO93381.1 - 5.3e-82 276.0 0.1 6.8e-82 275.6 0.1 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 6 ABC2_membrane PF01061.24 RKO93382.1 - 6.1e-08 32.3 12.1 8.1e-08 31.9 12.1 1.1 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 RKO93382.1 - 0.019 14.1 11.3 0.029 13.5 11.2 1.2 1 1 0 1 1 1 0 ABC-2 family transporter protein NiFe_hyd_3_EhaA PF17367.2 RKO93382.1 - 0.19 11.9 3.5 0.36 11.0 3.4 1.6 1 1 0 1 1 1 0 NiFe-hydrogenase-type-3 Eha complex subunit A SRP68 PF16969.5 RKO93384.1 - 9.9e-134 447.4 0.6 1.1e-133 447.2 0.6 1.0 1 0 0 1 1 1 1 RNA-binding signal recognition particle 68 TPR_7 PF13176.6 RKO93384.1 - 0.0091 16.0 1.7 1.7 8.8 0.1 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 RKO93384.1 - 0.32 11.3 6.7 2.7 8.4 0.8 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 RKO93384.1 - 1.3 9.3 12.1 0.33 11.2 1.9 3.7 4 0 0 4 4 4 0 Tetratricopeptide repeat C1_1 PF00130.22 RKO93385.1 - 0.11 12.4 0.5 0.19 11.6 0.5 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) adh_short PF00106.25 RKO93386.1 - 0.031 13.7 0.0 0.14 11.6 0.0 1.8 2 0 0 2 2 2 0 short chain dehydrogenase AhpC-TSA PF00578.21 RKO93387.1 - 1.4e-24 86.4 0.0 1.9e-24 85.9 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family 1-cysPrx_C PF10417.9 RKO93387.1 - 6.9e-11 41.8 0.0 1.2e-10 41.0 0.0 1.4 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Redoxin PF08534.10 RKO93387.1 - 1.1e-08 34.9 0.0 2.6e-08 33.7 0.0 1.7 2 0 0 2 2 2 1 Redoxin DUF924 PF06041.11 RKO93388.1 - 8.1e-42 143.4 0.1 9.6e-42 143.1 0.1 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF924) Pantoate_ligase PF02569.15 RKO93390.1 - 2.1e-94 315.7 0.0 2.4e-94 315.5 0.0 1.0 1 0 0 1 1 1 1 Pantoate-beta-alanine ligase Torus PF16131.5 RKO93391.1 - 5.4e-31 107.5 0.6 8.3e-31 106.9 0.6 1.3 1 0 0 1 1 1 1 Torus domain RRM_1 PF00076.22 RKO93391.1 - 8e-05 22.4 0.0 0.00013 21.7 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf_CCCH_4 PF18345.1 RKO93391.1 - 0.043 13.9 3.3 0.088 12.9 3.3 1.6 1 0 0 1 1 1 0 Zinc finger domain DUF4187 PF13821.6 RKO93392.1 - 7.8e-19 67.2 0.6 7.8e-19 67.2 0.6 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF4187) G-patch PF01585.23 RKO93392.1 - 1.5e-08 34.3 0.1 4.3e-08 32.9 0.1 1.8 1 1 0 1 1 1 1 G-patch domain G-patch_2 PF12656.7 RKO93392.1 - 1.3e-05 25.2 0.2 4.8e-05 23.4 0.0 2.1 1 1 0 1 1 1 1 G-patch domain Gpi16 PF04113.14 RKO93393.1 - 1.6e-164 548.5 0.0 3.2e-163 544.2 0.0 1.9 1 1 0 1 1 1 1 Gpi16 subunit, GPI transamidase component zf-RING_2 PF13639.6 RKO93394.1 - 3.9e-09 36.7 5.5 9.8e-09 35.4 4.6 2.1 1 1 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 RKO93394.1 - 7.7e-08 31.9 0.8 1.6e-07 30.9 0.8 1.6 1 0 0 1 1 1 1 RING-like zinc finger zf-C3HC4 PF00097.25 RKO93394.1 - 9.6e-07 28.6 0.5 1.9e-06 27.7 0.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 RKO93394.1 - 9.9e-05 22.5 1.7 0.00038 20.7 1.7 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 RKO93394.1 - 0.00019 21.4 3.0 0.00035 20.5 3.0 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 RKO93394.1 - 0.00019 21.2 4.2 0.00047 19.9 0.4 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 RKO93394.1 - 0.0038 17.2 2.8 0.0074 16.2 2.8 1.5 1 0 0 1 1 1 1 zinc-RING finger domain FANCL_C PF11793.8 RKO93394.1 - 0.027 14.6 1.0 0.073 13.3 0.1 2.1 2 0 0 2 2 2 0 FANCL C-terminal domain Flp1_like PF16982.5 RKO93394.1 - 0.033 13.6 0.8 0.076 12.4 0.8 1.6 1 0 0 1 1 1 0 Putative Flagellin, Flp1-like, domain PHD PF00628.29 RKO93394.1 - 0.16 11.9 2.4 0.29 11.1 2.4 1.5 1 0 0 1 1 1 0 PHD-finger zf-RING-like PF08746.11 RKO93394.1 - 0.69 10.3 4.6 0.21 12.0 0.6 2.1 2 0 0 2 2 2 0 RING-like domain G-patch_2 PF12656.7 RKO93396.1 - 3.9e-24 84.5 0.0 9.3e-24 83.3 0.0 1.7 1 0 0 1 1 1 1 G-patch domain G-patch PF01585.23 RKO93396.1 - 0.00011 22.0 0.1 0.00011 22.0 0.1 2.0 2 0 0 2 2 2 1 G-patch domain KN17_SH3 PF18131.1 RKO93396.1 - 0.0013 18.8 0.0 0.013 15.6 0.0 2.6 2 0 0 2 2 2 1 KN17 SH3-like C-terminal domain KOW PF00467.29 RKO93396.1 - 0.061 13.3 0.0 0.17 11.9 0.0 1.8 1 0 0 1 1 1 0 KOW motif HEAT_EZ PF13513.6 RKO93397.1 - 1e-05 25.9 0.0 0.00011 22.6 0.0 2.4 3 0 0 3 3 3 1 HEAT-like repeat HEAT PF02985.22 RKO93397.1 - 0.00019 21.4 0.2 0.26 11.6 0.0 3.3 3 0 0 3 3 3 1 HEAT repeat HEAT_2 PF13646.6 RKO93397.1 - 0.023 15.1 0.0 0.84 10.1 0.0 2.3 2 0 0 2 2 2 0 HEAT repeats LRR_RI_capping PF18779.1 RKO93397.1 - 0.053 13.2 0.1 0.15 11.7 0.0 1.8 2 0 0 2 2 2 0 Capping Ribonuclease inhibitor Leucine Rich Repeat RTP1_C1 PF10363.9 RKO93397.1 - 0.059 13.5 0.0 0.15 12.2 0.0 1.7 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 DUF3535 PF12054.8 RKO93397.1 - 0.082 12.1 0.0 1.5 8.0 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3535) DUF1624 PF07786.12 RKO93398.1 - 1.7e-05 24.5 4.6 0.0019 17.8 1.5 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF1624) DUF5009 PF16401.5 RKO93398.1 - 0.0045 16.5 2.1 0.024 14.1 2.1 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF5009) NTP_transf_2 PF01909.23 RKO93400.1 - 0.028 14.7 0.1 0.083 13.2 0.0 1.9 2 0 0 2 2 2 0 Nucleotidyltransferase domain Polbeta PF18765.1 RKO93400.1 - 0.073 13.2 0.0 0.17 12.0 0.0 1.7 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase PAP_assoc PF03828.19 RKO93400.1 - 0.13 12.5 0.0 0.28 11.4 0.0 1.6 1 0 0 1 1 1 0 Cid1 family poly A polymerase SNF2_N PF00176.23 RKO93401.1 - 1.2e-58 198.5 3.4 1.2e-58 198.5 3.4 1.4 2 0 0 2 2 2 1 SNF2 family N-terminal domain Helicase_C PF00271.31 RKO93401.1 - 1.6e-18 67.0 0.0 5e-18 65.5 0.0 1.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO93401.1 - 5.8e-06 26.4 0.1 1.6e-05 25.0 0.0 1.8 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HDA2-3 PF11496.8 RKO93401.1 - 9.3e-06 25.0 0.5 0.0001 21.6 0.1 2.5 2 1 0 2 2 2 1 Class II histone deacetylase complex subunits 2 and 3 DEAD PF00270.29 RKO93401.1 - 0.024 14.4 0.0 0.068 12.9 0.0 1.9 1 0 0 1 1 1 0 DEAD/DEAH box helicase baeRF_family12 PF18856.1 RKO93401.1 - 0.062 13.9 0.1 0.17 12.4 0.1 1.7 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 12 DUF4020 PF13212.6 RKO93401.1 - 0.077 12.8 0.3 0.19 11.5 0.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4020) YqzE PF14038.6 RKO93403.1 - 0.011 15.7 0.2 0.011 15.7 0.2 2.4 3 0 0 3 3 3 0 YqzE-like protein AAA_12 PF13087.6 RKO93404.1 - 1.9e-38 132.1 0.0 4.1e-38 131.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 RKO93404.1 - 2.6e-19 70.0 0.0 1.2e-12 48.2 0.0 2.7 2 1 0 2 2 2 2 AAA domain AAA_19 PF13245.6 RKO93404.1 - 6.4e-11 42.8 0.0 8.4e-07 29.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain Viral_helicase1 PF01443.18 RKO93404.1 - 4.9e-09 36.3 0.1 0.0018 18.1 0.0 3.2 2 1 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.6 RKO93404.1 - 6.7e-09 35.7 0.0 2.4e-06 27.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain UvrD_C_2 PF13538.6 RKO93404.1 - 0.00031 20.5 0.0 0.00084 19.1 0.0 1.8 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain DUF2075 PF09848.9 RKO93404.1 - 0.0067 15.7 0.0 1.8 7.7 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) UvrD-helicase PF00580.21 RKO93404.1 - 0.013 15.1 0.0 0.047 13.2 0.0 2.0 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain AAA_22 PF13401.6 RKO93404.1 - 0.034 14.4 0.0 0.31 11.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 RKO93404.1 - 0.044 13.8 0.0 1.2 9.1 0.0 2.9 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) Helicase_RecD PF05127.14 RKO93404.1 - 0.045 13.6 0.0 0.36 10.7 0.0 2.5 2 0 0 2 2 2 0 Helicase AAA_16 PF13191.6 RKO93404.1 - 0.064 13.6 0.0 0.25 11.7 0.0 2.1 1 1 0 1 1 1 0 AAA ATPase domain AAA_33 PF13671.6 RKO93404.1 - 0.08 13.1 0.0 0.21 11.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 RKO93404.1 - 0.09 13.3 0.0 0.23 12.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.15 RKO93404.1 - 0.15 10.9 0.0 0.24 10.1 0.0 1.3 1 0 0 1 1 1 0 Adenovirus IVa2 protein RNA_helicase PF00910.22 RKO93404.1 - 0.16 12.4 0.0 0.41 11.0 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_24 PF13479.6 RKO93404.1 - 0.16 11.7 0.0 0.34 10.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain Zmiz1_N PF18028.1 RKO93405.1 - 1.5e-10 41.3 0.0 2.7e-10 40.5 0.0 1.3 1 0 0 1 1 1 1 Zmiz1 N-terminal tetratricopeptide repeat domain APC1_C PF18122.1 RKO93405.1 - 0.085 12.8 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex sub unit 1 C-terminal domain DNA_pol_E_B PF04042.16 RKO93406.1 - 5.4e-47 159.9 0.0 8.3e-47 159.3 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B DNA_pol_D_N PF18018.1 RKO93406.1 - 2.5e-37 127.9 0.0 8e-37 126.2 0.0 1.9 2 1 0 2 2 2 1 DNA polymerase delta subunit OB-fold domain 4HBT PF03061.22 RKO93407.1 - 0.01 16.2 0.0 0.017 15.4 0.0 1.4 1 0 0 1 1 1 0 Thioesterase superfamily HscB_4_cys PF18256.1 RKO93407.1 - 0.077 12.8 0.7 0.14 12.0 0.7 1.4 1 0 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif GDP_Man_Dehyd PF16363.5 RKO93409.1 - 6.2e-90 302.0 0.2 7.9e-50 170.1 0.0 2.0 1 1 1 2 2 2 2 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 RKO93409.1 - 1.6e-37 129.3 0.1 1.7e-23 83.4 0.0 2.1 1 1 1 2 2 2 2 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 RKO93409.1 - 0.00015 21.0 0.0 0.00025 20.2 0.0 1.4 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 RKO93409.1 - 0.0036 16.5 0.0 0.0049 16.0 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 RKO93409.1 - 0.0056 16.6 0.0 0.012 15.5 0.0 1.6 1 1 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 RKO93409.1 - 0.035 13.6 0.0 0.061 12.9 0.0 1.4 1 0 0 1 1 1 0 NmrA-like family DNA_gyraseB PF00204.25 RKO93410.1 - 1.4e-22 80.0 0.8 2.6e-22 79.1 0.8 1.4 1 0 0 1 1 1 1 DNA gyrase B HATPase_c PF02518.26 RKO93410.1 - 2.2e-14 53.9 0.1 6.3e-14 52.4 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Phage_T7_tail PF03906.14 RKO93411.1 - 0.05 13.3 0.2 0.18 11.4 0.0 2.1 2 0 0 2 2 2 0 Phage T7 tail fibre protein E1-E2_ATPase PF00122.20 RKO93412.1 - 1e-27 96.8 7.6 1e-27 96.8 7.6 2.4 2 1 1 3 3 3 1 E1-E2 ATPase Hydrolase PF00702.26 RKO93412.1 - 1.3e-19 71.3 0.2 3.4e-19 70.0 0.2 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 RKO93412.1 - 0.033 13.9 0.5 0.078 12.7 0.1 1.8 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 RKO93412.1 - 0.15 12.2 0.1 2.7 8.1 0.0 2.5 2 0 0 2 2 2 0 Cation transport ATPase (P-type) Gelsolin PF00626.22 RKO93413.1 - 1.2e-30 105.2 0.0 3.9e-07 29.9 0.0 5.1 5 0 0 5 5 5 4 Gelsolin repeat PH PF00169.29 RKO93413.1 - 8.4e-15 55.2 0.0 0.00075 20.0 0.0 3.7 3 0 0 3 3 3 3 PH domain VHP PF02209.19 RKO93413.1 - 3.6e-10 39.7 2.3 8.8e-10 38.5 2.3 1.7 1 0 0 1 1 1 1 Villin headpiece domain PH_6 PF15406.6 RKO93413.1 - 2.2e-08 34.3 0.0 0.053 13.8 0.0 3.5 3 0 0 3 3 3 3 Pleckstrin homology domain WD40_4 PF16300.5 RKO93413.1 - 6.9e-07 29.1 0.1 1.7e-06 27.8 0.1 1.6 1 0 0 1 1 1 1 Type of WD40 repeat WD40 PF00400.32 RKO93413.1 - 1.4e-05 25.7 0.2 7.7 7.6 0.0 4.3 4 0 0 4 4 4 2 WD domain, G-beta repeat DUF1899 PF08953.11 RKO93413.1 - 0.00054 19.8 0.0 0.004 17.0 0.0 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF1899) PH_9 PF15410.6 RKO93413.1 - 0.016 15.5 0.2 0.59 10.5 0.1 3.1 2 1 0 2 2 2 0 Pleckstrin homology domain PH_13 PF16652.5 RKO93413.1 - 0.022 14.6 0.0 2.6 7.8 0.0 2.7 3 0 0 3 3 3 0 Pleckstrin homology domain ANAPC4_WD40 PF12894.7 RKO93413.1 - 0.056 13.7 0.0 6.1 7.2 0.0 3.6 4 1 1 5 5 5 0 Anaphase-promoting complex subunit 4 WD40 domain PH_2 PF08458.10 RKO93413.1 - 0.077 13.4 0.0 28 5.1 0.0 3.2 4 0 0 4 4 4 0 Plant pleckstrin homology-like region CH PF00307.31 RKO93414.1 - 4.9e-06 26.7 0.1 4.5e-05 23.6 0.0 2.0 2 0 0 2 2 2 1 Calponin homology (CH) domain CH_2 PF06294.11 RKO93414.1 - 0.0033 17.5 0.0 0.0069 16.5 0.0 1.6 1 0 0 1 1 1 1 CH-like domain in sperm protein ATG16 PF08614.11 RKO93414.1 - 0.011 16.0 0.1 0.015 15.6 0.1 1.2 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) EB1 PF03271.17 RKO93414.1 - 0.018 15.3 0.2 0.044 14.0 0.2 1.7 1 0 0 1 1 1 0 EB1-like C-terminal motif V-SNARE PF05008.15 RKO93414.1 - 0.06 13.7 0.2 0.12 12.7 0.2 1.5 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus COesterase PF00135.28 RKO93415.1 - 7.6e-21 74.6 0.0 1.7e-20 73.4 0.0 1.5 1 1 0 1 1 1 1 Carboxylesterase family Lactamase_B_4 PF13691.6 RKO93416.1 - 1.4e-20 72.7 0.1 3.8e-20 71.3 0.1 1.8 1 0 0 1 1 1 1 tRNase Z endonuclease Lactamase_B_2 PF12706.7 RKO93416.1 - 1.4e-15 57.3 0.2 3e-15 56.3 0.1 1.6 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 RKO93416.1 - 0.00017 21.7 0.2 0.00051 20.1 0.2 1.9 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily DUF5548 PF17702.1 RKO93416.1 - 0.11 12.3 0.0 0.24 11.1 0.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5548) DUF3147 PF11345.8 RKO93417.1 - 0.055 13.8 2.4 0.15 12.5 2.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3147) PX PF00787.24 RKO93418.1 - 1.1e-17 64.1 0.0 2.4e-17 62.9 0.0 1.6 1 0 0 1 1 1 1 PX domain PXA PF02194.15 RKO93418.1 - 1e-10 41.9 0.0 2.3e-10 40.7 0.0 1.6 1 0 0 1 1 1 1 PXA domain RGS PF00615.19 RKO93418.1 - 1.5e-05 25.3 0.0 5.4e-05 23.5 0.0 2.0 1 0 0 1 1 1 1 Regulator of G protein signaling domain DUF2577 PF10844.8 RKO93419.1 - 0.017 15.3 3.3 0.67 10.2 0.1 3.9 3 1 0 4 4 4 0 Protein of unknown function (DUF2577) Cullin_binding PF03556.15 RKO93421.1 - 5.5e-26 91.4 1.8 7.5e-26 90.9 1.8 1.2 1 0 0 1 1 1 1 Cullin binding adh_short PF00106.25 RKO93422.1 - 1.7e-14 53.7 0.4 2.1e-14 53.4 0.4 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 RKO93422.1 - 4.1e-09 36.3 0.1 4.3e-09 36.3 0.1 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase LRR_4 PF12799.7 RKO93422.1 - 1e-06 28.9 1.0 2.1e-06 28.0 0.3 1.9 1 1 1 2 2 2 1 Leucine Rich repeats (2 copies) KR PF08659.10 RKO93422.1 - 3.2e-06 27.2 0.2 3.8e-06 26.9 0.2 1.1 1 0 0 1 1 1 1 KR domain LRR_8 PF13855.6 RKO93422.1 - 0.0011 18.7 5.8 0.015 15.0 0.9 1.7 1 1 1 2 2 2 2 Leucine rich repeat LRR_1 PF00560.33 RKO93422.1 - 0.3 11.8 1.8 36 5.4 0.1 3.2 3 0 0 3 3 3 0 Leucine Rich Repeat cNMP_binding PF00027.29 RKO93423.1 - 1.2e-12 47.7 0.2 4.8e-12 45.8 0.2 1.8 1 1 0 1 1 1 1 Cyclic nucleotide-binding domain zf-C2H2_aberr PF17017.5 RKO93424.1 - 2.8e-05 24.4 6.3 0.0095 16.1 0.3 2.8 2 1 1 3 3 3 2 Aberrant zinc-finger zf-C2H2 PF00096.26 RKO93424.1 - 0.00012 22.3 9.2 0.065 13.7 0.1 3.2 3 0 0 3 3 3 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO93424.1 - 0.012 16.4 10.2 1.5 9.9 0.0 3.7 3 0 0 3 3 3 0 C2H2-type zinc finger zf-BED PF02892.15 RKO93424.1 - 0.09 12.8 0.7 0.53 10.4 0.1 2.3 2 0 0 2 2 2 0 BED zinc finger DUF5492 PF17596.2 RKO93424.1 - 0.35 11.2 2.2 0.49 10.8 0.2 2.2 2 1 0 2 2 2 0 Family of unknown function (DUF5492) SNF2_N PF00176.23 RKO93425.1 - 3.2e-65 220.2 0.0 5.4e-65 219.4 0.0 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain Chromo PF00385.24 RKO93425.1 - 7e-23 80.3 2.1 1.8e-14 53.4 0.2 2.9 2 0 0 2 2 2 2 Chromo (CHRromatin Organisation MOdifier) domain Helicase_C PF00271.31 RKO93425.1 - 1.3e-19 70.6 0.0 2.7e-19 69.6 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO93425.1 - 4.7e-09 36.5 0.1 1.6e-08 34.8 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DUF4208 PF13907.6 RKO93425.1 - 3.7e-08 33.7 0.1 1.8e-07 31.5 0.1 2.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4208) CDH1_2_SANT_HL1 PF18375.1 RKO93425.1 - 1.1e-05 26.0 0.2 5.1e-05 23.9 0.0 2.3 2 0 0 2 2 2 1 CDH1/2 SANT-Helical linker 1 CHDCT2 PF08074.11 RKO93425.1 - 0.00013 22.2 0.0 0.00065 19.9 0.0 2.2 2 0 0 2 2 2 1 CHDCT2 (NUC038) domain ERCC3_RAD25_C PF16203.5 RKO93425.1 - 0.00031 20.1 0.2 0.00057 19.2 0.2 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase SLIDE PF09111.10 RKO93425.1 - 0.027 14.5 0.5 0.12 12.4 0.0 2.4 3 0 0 3 3 3 0 SLIDE Cdh1_DBD_1 PF18196.1 RKO93425.1 - 0.23 11.8 0.0 0.23 11.8 0.0 3.3 3 1 0 3 3 3 0 Chromodomain helicase DNA-binding domain 1 p450 PF00067.22 RKO93429.1 - 3.3e-76 256.9 0.0 3.9e-76 256.7 0.0 1.0 1 0 0 1 1 1 1 Cytochrome P450 ABC_membrane PF00664.23 RKO93430.1 - 2.6e-06 27.3 0.0 2.6e-06 27.3 0.0 1.0 1 0 0 1 1 1 1 ABC transporter transmembrane region Bd3614_N PF14442.6 RKO93430.1 - 0.19 12.0 0.0 0.27 11.5 0.0 1.3 1 1 0 1 1 1 0 Bd3614-like deaminase N-terminal F-box-like PF12937.7 RKO93431.1 - 0.035 14.0 0.5 0.087 12.7 0.5 1.7 1 0 0 1 1 1 0 F-box-like LRR_4 PF12799.7 RKO93431.1 - 0.33 11.5 1.1 56 4.4 0.0 4.2 4 1 1 5 5 5 0 Leucine Rich repeats (2 copies) IGPS PF00218.21 RKO93435.1 - 9.8e-87 290.3 0.1 3.8e-86 288.4 0.0 1.9 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase GATase PF00117.28 RKO93435.1 - 4.1e-48 163.7 0.0 6.3e-48 163.1 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I PRAI PF00697.22 RKO93435.1 - 1.1e-36 126.4 0.1 1.9e-30 106.1 0.0 2.3 2 0 0 2 2 2 2 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Peptidase_C26 PF07722.13 RKO93435.1 - 5.9e-06 26.2 0.2 1.7e-05 24.7 0.2 1.8 1 1 0 1 1 1 1 Peptidase C26 FMN_dh PF01070.18 RKO93435.1 - 0.0079 15.3 5.0 0.024 13.7 1.0 2.5 2 0 0 2 2 2 1 FMN-dependent dehydrogenase QRPTase_C PF01729.19 RKO93435.1 - 0.13 12.1 0.6 0.26 11.0 0.1 1.8 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain Sec1 PF00995.23 RKO93436.1 - 3e-42 145.6 0.0 3.6e-42 145.4 0.0 1.0 1 0 0 1 1 1 1 Sec1 family RNase_P_pop3 PF08228.11 RKO93437.1 - 4.2e-10 39.9 0.0 4.5e-08 33.3 0.0 2.1 2 0 0 2 2 2 2 RNase P subunit Pop3 Sec1 PF00995.23 RKO93438.1 - 6.4e-76 256.8 1.4 7.1e-76 256.6 1.4 1.0 1 0 0 1 1 1 1 Sec1 family Pam17 PF08566.10 RKO93441.1 - 8.5e-36 123.3 0.0 1e-35 123.0 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial import protein Pam17 DUF3017 PF11222.8 RKO93441.1 - 0.017 15.3 0.2 0.053 13.8 0.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3017) KH_1 PF00013.29 RKO93442.1 - 1e-86 284.7 38.7 4.9e-11 42.3 0.0 14.3 13 2 0 13 13 13 12 KH domain KH_2 PF07650.17 RKO93442.1 - 4.2e-08 32.9 26.3 0.54 10.1 0.2 9.9 9 1 0 10 10 10 5 KH domain Secretin_N PF03958.17 RKO93442.1 - 0.00059 20.2 2.4 5.8 7.4 0.0 5.0 5 0 0 5 5 5 2 Bacterial type II/III secretion system short domain SLS PF14611.6 RKO93442.1 - 0.29 10.9 13.7 1.4 8.7 0.0 5.2 4 1 1 6 6 6 0 Mitochondrial inner-membrane-bound regulator KH_4 PF13083.6 RKO93442.1 - 0.85 9.5 20.0 0.34 10.8 0.1 6.8 8 0 0 8 8 8 0 KH domain adh_short_C2 PF13561.6 RKO93446.1 - 1.6e-58 198.0 1.9 1.9e-58 197.8 1.9 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO93446.1 - 5.6e-44 149.9 0.8 6.7e-44 149.7 0.8 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 RKO93446.1 - 1.2e-11 44.9 0.6 1.8e-11 44.3 0.6 1.3 1 1 0 1 1 1 1 KR domain Epimerase PF01370.21 RKO93446.1 - 5.3e-05 22.8 0.3 8e-05 22.2 0.3 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 RKO93446.1 - 0.012 14.8 0.1 0.021 13.9 0.1 1.4 1 0 0 1 1 1 0 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 RKO93446.1 - 0.017 14.3 0.1 0.02 14.0 0.1 1.1 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Enoyl_reductase PF12241.8 RKO93446.1 - 0.03 13.7 0.1 0.068 12.5 0.1 1.5 1 0 0 1 1 1 0 Trans-2-enoyl-CoA reductase catalytic region THF_DHG_CYH_C PF02882.19 RKO93446.1 - 0.035 13.4 0.1 0.055 12.8 0.1 1.5 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF2841 PF11001.8 RKO93450.1 - 0.061 13.4 0.0 0.47 10.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2841) AMP-binding PF00501.28 RKO93451.1 - 2.7e-82 276.6 0.0 3.4e-82 276.3 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme TRSP PF12500.8 RKO93453.1 - 0.15 12.0 0.0 0.27 11.1 0.0 1.3 1 0 0 1 1 1 0 TRSP domain C terminus to PRTase_2 E7 PF00527.18 RKO93453.1 - 0.32 11.2 4.0 9.1 6.6 4.0 2.3 1 1 0 1 1 1 0 E7 protein, Early protein STAG PF08514.11 RKO93457.1 - 1.8e-26 92.3 0.0 4.7e-26 90.9 0.0 1.7 1 0 0 1 1 1 1 STAG domain HEAT_2 PF13646.6 RKO93457.1 - 0.0011 19.3 3.1 0.027 14.8 0.3 4.4 5 0 0 5 5 5 1 HEAT repeats DIOX_N PF14226.6 RKO93460.1 - 0.0045 17.7 0.0 0.0052 17.5 0.0 1.1 1 0 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal DUF5639 PF18690.1 RKO93461.1 - 0.0044 17.2 0.0 0.0072 16.5 0.0 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5639) Pept_tRNA_hydro PF01195.19 RKO93461.1 - 0.081 12.9 0.0 0.096 12.6 0.0 1.2 1 0 0 1 1 1 0 Peptidyl-tRNA hydrolase CBP_BcsO PF17037.5 RKO93462.1 - 0.34 11.0 2.9 0.42 10.7 2.9 1.0 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsO Cpn60_TCP1 PF00118.24 RKO93463.1 - 3e-39 135.0 0.1 3.7e-39 134.7 0.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family ABC1 PF03109.16 RKO93464.1 - 2.6e-32 111.5 0.0 4.7e-32 110.7 0.0 1.4 1 0 0 1 1 1 1 ABC1 family APH PF01636.23 RKO93464.1 - 0.00019 21.5 0.2 0.099 12.6 0.1 2.5 2 1 0 2 2 2 2 Phosphotransferase enzyme family ANAPC4_WD40 PF12894.7 RKO93465.1 - 3.8e-09 36.7 0.1 0.49 10.7 0.0 4.5 2 2 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain NTP_transf_2 PF01909.23 RKO93465.1 - 6e-09 36.1 0.0 2e-08 34.4 0.0 1.9 1 0 0 1 1 1 1 Nucleotidyltransferase domain PAP_assoc PF03828.19 RKO93465.1 - 9e-09 35.4 0.0 2.3e-08 34.1 0.0 1.8 1 0 0 1 1 1 1 Cid1 family poly A polymerase WD40 PF00400.32 RKO93465.1 - 3e-08 34.2 5.9 0.12 13.3 0.1 5.0 4 0 0 4 4 4 3 WD domain, G-beta repeat Atrophin-1 PF03154.15 RKO93465.1 - 8.4e-06 24.4 1.8 8.4e-06 24.4 1.8 1.6 2 0 0 2 2 2 1 Atrophin-1 family Nup160 PF11715.8 RKO93465.1 - 0.00022 20.0 0.0 0.015 14.0 0.0 2.2 2 0 0 2 2 2 2 Nucleoporin Nup120/160 Polbeta PF18765.1 RKO93465.1 - 0.15 12.2 0.1 0.57 10.3 0.0 1.9 2 0 0 2 2 2 0 Polymerase beta, Nucleotidyltransferase Auts2 PF15336.6 RKO93465.1 - 7.2 6.7 13.4 19 5.3 13.4 1.6 1 0 0 1 1 1 0 Autism susceptibility gene 2 protein Herpes_Helicase PF02689.14 RKO93467.1 - 0.072 11.0 0.0 0.098 10.6 0.0 1.1 1 0 0 1 1 1 0 Helicase Radial_spoke PF04712.12 RKO93469.1 - 0.069 12.1 0.1 0.089 11.7 0.1 1.1 1 0 0 1 1 1 0 Radial spokehead-like protein Aldo_ket_red PF00248.21 RKO93476.1 - 1.1e-76 257.9 0.0 1.2e-76 257.7 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family NAD_binding_10 PF13460.6 RKO93477.1 - 2.5e-05 24.3 0.0 6.3e-05 22.9 0.0 1.9 1 1 0 1 1 1 1 NAD(P)H-binding Semialdhyde_dh PF01118.24 RKO93477.1 - 0.033 14.6 0.0 0.054 13.9 0.0 1.4 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain Polysacc_synt_2 PF02719.15 RKO93477.1 - 0.12 11.5 0.0 0.17 10.9 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Pyridoxal_deC PF00282.19 RKO93479.1 - 1.3e-07 30.7 0.0 1.5e-07 30.5 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain F-box-like PF12937.7 RKO93480.1 - 0.0025 17.7 1.0 0.012 15.5 1.0 2.3 1 1 0 1 1 1 1 F-box-like LRR_8 PF13855.6 RKO93480.1 - 0.036 13.8 0.3 0.75 9.6 0.1 3.2 3 0 0 3 3 3 0 Leucine rich repeat UBM PF14377.6 RKO93480.1 - 0.66 9.5 3.5 3.4 7.3 0.1 3.0 2 0 0 2 2 2 0 Ubiquitin binding region ADK PF00406.22 RKO93481.1 - 3.3e-05 24.0 0.0 0.014 15.5 0.0 2.6 2 0 0 2 2 2 2 Adenylate kinase Med2 PF11214.8 RKO93481.1 - 6.8 6.9 7.4 7.5 6.8 0.8 2.5 2 0 0 2 2 2 0 Mediator complex subunit 2 Methyltransf_16 PF10294.9 RKO93484.1 - 1.9e-22 79.9 0.0 2.6e-22 79.4 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase PrmA PF06325.13 RKO93484.1 - 0.021 14.3 0.0 0.032 13.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) YjgF_endoribonc PF14588.6 RKO93484.1 - 0.086 13.0 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 YjgF/chorismate_mutase-like, putative endoribonuclease MTS PF05175.14 RKO93484.1 - 0.17 11.5 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain PYNP_C PF07831.13 RKO93484.1 - 0.91 9.2 4.3 7.8 6.2 0.7 2.5 1 1 1 2 2 2 0 Pyrimidine nucleoside phosphorylase C-terminal domain HhH-GPD PF00730.25 RKO93485.1 - 1.4e-14 54.5 0.0 2.1e-14 53.9 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 RKO93485.1 - 3.7e-10 39.2 0.0 8.6e-10 38.0 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 RKO93485.1 - 0.05 14.0 6.5 0.087 13.2 6.5 1.4 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III DUF2400 PF09674.10 RKO93485.1 - 0.13 12.2 0.1 0.29 11.1 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2400) HHH_5 PF14520.6 RKO93485.1 - 0.14 12.8 0.0 0.75 10.4 0.0 2.1 2 0 0 2 2 2 0 Helix-hairpin-helix domain Ribosomal_L6 PF00347.23 RKO93486.1 - 4.8e-17 62.4 2.0 2.9e-08 34.3 0.0 2.5 3 0 0 3 3 3 2 Ribosomal protein L6 HAUS-augmin3 PF14932.6 RKO93487.1 - 1.1e-06 28.5 3.5 2.5e-05 24.0 0.1 3.1 3 0 0 3 3 3 2 HAUS augmin-like complex subunit 3 FancD2 PF14631.6 RKO93488.1 - 6.2e-59 199.6 0.0 6.2e-59 199.6 0.0 2.5 1 1 2 3 3 3 1 Fanconi anaemia protein FancD2 nuclease BUD22 PF09073.10 RKO93488.1 - 0.0053 16.2 30.1 0.0085 15.5 30.1 1.3 1 0 0 1 1 1 1 BUD22 PPP4R2 PF09184.11 RKO93488.1 - 0.0089 15.6 27.8 0.014 15.0 27.8 1.3 1 0 0 1 1 1 1 PPP4R2 Herpes_DNAp_acc PF04929.12 RKO93488.1 - 8.9 5.2 6.7 15 4.4 6.7 1.3 1 0 0 1 1 1 0 Herpes DNA replication accessory factor F-box-like PF12937.7 RKO93489.1 - 0.00022 21.1 0.3 0.00056 19.8 0.3 1.6 1 0 0 1 1 1 1 F-box-like FGGY_N PF00370.21 RKO93490.1 - 1.8e-72 243.9 0.0 2.2e-72 243.5 0.0 1.1 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain B12D PF06522.11 RKO93491.1 - 9.4e-17 60.6 0.0 1.2e-16 60.2 0.0 1.1 1 0 0 1 1 1 1 NADH-ubiquinone reductase complex 1 MLRQ subunit TFIIS_M PF07500.14 RKO93492.1 - 4.2e-24 85.2 0.7 7e-24 84.5 0.7 1.4 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain SPOC PF07744.13 RKO93492.1 - 1.2e-17 64.2 0.0 2.2e-17 63.4 0.0 1.4 1 0 0 1 1 1 1 SPOC domain CIAPIN1 PF05093.13 RKO93495.1 - 4.9e-26 91.2 5.7 1.3e-25 89.8 5.7 1.7 1 1 0 1 1 1 1 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis zf-CHY PF05495.12 RKO93496.1 - 8.8e-20 71.0 18.9 8.8e-20 71.0 18.9 3.5 2 1 0 2 2 2 1 CHY zinc finger zinc_ribbon_6 PF14599.6 RKO93496.1 - 9.4e-18 64.0 0.5 9.4e-18 64.0 0.5 4.7 3 2 1 4 4 4 1 Zinc-ribbon zf-RING_2 PF13639.6 RKO93496.1 - 1.1e-05 25.6 16.5 1.1e-05 25.6 16.5 4.8 3 1 1 4 4 4 1 Ring finger domain zf-C3HC4_2 PF13923.6 RKO93496.1 - 0.034 14.0 17.6 0.034 14.0 17.6 4.8 3 1 1 4 4 4 0 Zinc finger, C3HC4 type (RING finger) Cpn60_TCP1 PF00118.24 RKO93497.1 - 1.3e-123 413.2 0.3 1.8e-123 412.8 0.3 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family CPT PF07931.12 RKO93497.1 - 0.061 13.2 0.1 0.77 9.6 0.1 2.3 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein DUF2781 PF10914.8 RKO93498.1 - 5.7e-12 46.3 3.9 2e-11 44.5 3.9 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF2781) Septin PF00735.18 RKO93499.1 - 7.1e-33 114.1 0.0 1.9e-22 79.9 0.0 2.0 2 0 0 2 2 2 2 Septin Gti1_Pac2 PF09729.9 RKO93500.1 - 6.1e-28 98.1 0.8 6.6e-28 98.0 0.8 1.0 1 0 0 1 1 1 1 Gti1/Pac2 family CHASE5 PF17149.4 RKO93500.1 - 0.15 12.0 0.0 0.18 11.7 0.0 1.1 1 0 0 1 1 1 0 Periplasmic sensor domain found in signal transduction proteins Gti1_Pac2 PF09729.9 RKO93501.1 - 0.023 14.8 0.0 0.098 12.7 0.0 2.0 2 1 0 2 2 2 0 Gti1/Pac2 family MGC-24 PF05283.11 RKO93502.1 - 0.3 11.5 6.9 0.88 10.0 6.9 1.8 1 0 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF4402 PF14352.6 RKO93502.1 - 0.49 11.1 10.7 1.3 9.7 10.7 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4402) Herpes_capsid PF06112.11 RKO93502.1 - 5 7.2 15.8 9.6 6.2 15.8 1.4 1 0 0 1 1 1 0 Gammaherpesvirus capsid protein 2OG-FeII_Oxy PF03171.20 RKO93506.1 - 2.8e-18 66.3 0.0 4.5e-18 65.6 0.0 1.3 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily DIOX_N PF14226.6 RKO93506.1 - 6.1e-12 46.3 0.0 1.5e-11 45.0 0.0 1.7 1 1 0 1 1 1 1 non-haem dioxygenase in morphine synthesis N-terminal NARP1 PF12569.8 RKO93510.1 - 4.8e-184 613.1 16.0 1.3e-183 611.6 7.6 2.4 2 1 0 2 2 2 2 NMDA receptor-regulated protein 1 TPR_2 PF07719.17 RKO93510.1 - 5.3e-20 69.9 22.8 2.6e-05 24.0 0.6 11.0 11 0 0 11 11 10 3 Tetratricopeptide repeat TPR_14 PF13428.6 RKO93510.1 - 7.4e-12 45.0 10.8 0.087 13.7 0.0 9.5 9 2 2 11 11 9 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO93510.1 - 2.8e-11 43.8 14.5 0.67 10.5 0.1 7.8 8 1 0 8 8 7 4 Tetratricopeptide repeat TPR_16 PF13432.6 RKO93510.1 - 1.7e-08 35.0 14.3 0.33 11.6 0.0 8.3 9 1 1 10 10 8 2 Tetratricopeptide repeat TPR_1 PF00515.28 RKO93510.1 - 4.8e-08 32.5 24.9 0.0023 17.7 1.1 8.5 10 0 0 10 10 10 3 Tetratricopeptide repeat TPR_11 PF13414.6 RKO93510.1 - 7.5e-08 31.9 4.0 0.0017 18.0 0.1 4.9 6 0 0 6 6 5 2 TPR repeat TPR_7 PF13176.6 RKO93510.1 - 5.3e-07 29.2 0.9 0.18 11.9 0.1 5.3 5 0 0 5 5 5 1 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO93510.1 - 5.7e-07 29.7 15.4 0.029 14.6 1.0 6.3 7 1 1 8 8 8 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_12 PF13424.6 RKO93510.1 - 1.5e-06 28.4 6.1 0.18 12.1 0.1 7.0 8 0 0 8 8 7 1 Tetratricopeptide repeat TPR_8 PF13181.6 RKO93510.1 - 3.4e-06 26.8 19.6 0.00082 19.4 0.4 7.6 8 0 0 8 8 6 1 Tetratricopeptide repeat TPR_9 PF13371.6 RKO93510.1 - 2.7e-05 24.2 0.6 0.89 9.8 0.0 5.1 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_17 PF13431.6 RKO93510.1 - 6.5e-05 23.0 5.4 0.47 10.9 0.0 6.0 7 0 0 7 7 5 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO93510.1 - 9.9e-05 22.7 7.7 32 5.4 0.0 8.7 9 0 0 9 9 9 0 Tetratricopeptide repeat TPR_15 PF13429.6 RKO93510.1 - 0.00022 20.6 4.0 0.03 13.6 0.1 4.6 4 1 0 5 5 5 1 Tetratricopeptide repeat YokU PF14122.6 RKO93510.1 - 0.013 15.5 0.1 0.37 10.8 0.0 2.7 2 0 0 2 2 2 0 YokU-like protein, putative antitoxin TPR_3 PF07720.12 RKO93510.1 - 0.061 13.3 8.4 1.9 8.6 0.9 3.8 3 0 0 3 3 3 0 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 RKO93510.1 - 0.077 12.6 0.3 8.4 6.1 0.0 3.3 3 0 0 3 3 3 0 Bacterial type III secretion protein (HrpB1_HrpK) Fis1_TPR_C PF14853.6 RKO93510.1 - 0.69 10.0 3.7 16 5.7 0.2 4.2 5 0 0 5 5 5 0 Fis1 C-terminal tetratricopeptide repeat MIT PF04212.18 RKO93510.1 - 3.5 7.8 13.0 0.14 12.3 0.4 4.6 6 0 0 6 6 4 0 MIT (microtubule interacting and transport) domain D5_N PF08706.11 RKO93514.1 - 2.5e-09 37.6 0.2 3.8e-09 37.0 0.2 1.2 1 0 0 1 1 1 1 D5 N terminal like Vac14_Fig4_bd PF11916.8 RKO93514.1 - 0.03 14.0 0.0 0.049 13.3 0.0 1.2 1 0 0 1 1 1 0 Vacuolar protein 14 C-terminal Fig4p binding XS PF03468.14 RKO93514.1 - 0.088 13.1 3.4 1.5 9.2 1.0 2.3 1 1 1 2 2 2 0 XS domain Y_phosphatase2 PF03162.13 RKO93515.1 - 8.5e-13 48.2 0.0 1.1e-12 47.9 0.0 1.1 1 0 0 1 1 1 1 Tyrosine phosphatase family F-box-like PF12937.7 RKO93517.1 - 0.00041 20.2 0.2 0.0014 18.4 0.2 2.0 2 0 0 2 2 2 1 F-box-like DUF2613 PF11021.8 RKO93517.1 - 0.091 12.9 3.3 0.95 9.6 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2613) F-box PF00646.33 RKO93517.1 - 0.47 10.4 5.9 0.36 10.8 2.3 2.6 2 1 0 2 2 2 0 F-box domain Methyltransf_16 PF10294.9 RKO93519.1 - 9.9e-19 67.7 0.0 1.3e-18 67.4 0.0 1.1 1 0 0 1 1 1 1 Lysine methyltransferase MTS PF05175.14 RKO93519.1 - 0.0064 16.1 0.0 0.0094 15.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 RKO93519.1 - 0.015 16.0 0.0 0.024 15.3 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 RKO93519.1 - 0.036 13.5 0.0 0.053 12.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_23 PF13489.6 RKO93519.1 - 0.06 13.2 0.0 0.091 12.6 0.0 1.3 1 1 0 1 1 1 0 Methyltransferase domain EGF_2 PF07974.13 RKO93520.1 - 0.00017 21.8 21.6 0.0072 16.7 11.4 3.1 2 2 0 2 2 2 2 EGF-like domain EGF PF00008.27 RKO93520.1 - 0.00033 20.9 11.1 0.0044 17.3 8.1 3.5 4 2 0 4 4 4 2 EGF-like domain hEGF PF12661.7 RKO93520.1 - 0.033 14.8 4.4 0.033 14.8 4.4 3.9 4 1 0 4 4 4 0 Human growth factor-like EGF Laminin_EGF PF00053.24 RKO93520.1 - 0.035 14.3 25.9 0.063 13.4 6.9 3.1 1 1 2 3 3 3 0 Laminin EGF domain Glyco_transf_22 PF03901.17 RKO93524.1 - 1.1e-43 150.1 10.0 1.3e-43 149.8 10.0 1.0 1 0 0 1 1 1 1 Alg9-like mannosyltransferase family DsbB PF02600.16 RKO93524.1 - 1.9 8.9 9.3 0.28 11.6 0.2 2.9 2 1 0 2 2 2 0 Disulfide bond formation protein DsbB Mannosyl_trans3 PF11051.8 RKO93525.1 - 1.2e-36 126.5 0.0 9.3e-36 123.6 0.0 1.9 1 1 0 1 1 1 1 Mannosyltransferase putative PMEI PF04043.15 RKO93526.1 - 0.14 12.5 3.6 0.061 13.7 1.3 1.6 2 0 0 2 2 2 0 Plant invertase/pectin methylesterase inhibitor NAD_binding_5 PF07994.12 RKO93527.1 - 2.3e-148 493.8 0.1 2.7e-148 493.6 0.1 1.0 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase Inos-1-P_synth PF01658.17 RKO93527.1 - 8e-46 154.8 0.1 1.6e-45 153.8 0.1 1.5 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase Ribosomal_S28e PF01200.18 RKO93528.1 - 1.8e-31 107.9 0.6 1.9e-31 107.8 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e LRR_8 PF13855.6 RKO93529.1 - 1.7e-39 133.4 26.5 1.5e-06 27.8 0.0 8.8 7 1 2 9 9 9 8 Leucine rich repeat LRR_4 PF12799.7 RKO93529.1 - 3.8e-30 103.4 34.9 4.3e-06 27.0 1.0 11.3 10 1 2 13 13 13 8 Leucine Rich repeats (2 copies) Guanylate_cyc PF00211.20 RKO93529.1 - 1.5e-13 50.8 0.0 2.4e-13 50.1 0.0 1.2 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain PP2C PF00481.21 RKO93529.1 - 4.9e-08 32.9 0.0 2.8e-06 27.1 0.1 2.9 2 1 0 2 2 2 1 Protein phosphatase 2C LRR_6 PF13516.6 RKO93529.1 - 2.1e-07 30.4 25.2 0.17 12.0 0.2 10.6 11 0 0 11 11 11 3 Leucine Rich repeat LRR_1 PF00560.33 RKO93529.1 - 5.4e-06 26.2 32.0 3.3 8.6 0.2 12.4 14 0 0 14 14 14 1 Leucine Rich Repeat RA PF00788.23 RKO93529.1 - 4.2e-05 24.1 0.0 8.4e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 Ras association (RalGDS/AF-6) domain LRR_9 PF14580.6 RKO93529.1 - 0.00029 20.4 0.7 0.18 11.3 0.0 3.5 3 1 0 3 3 3 1 Leucine-rich repeat CHASE5 PF17149.4 RKO93533.1 - 0.18 11.7 0.0 0.32 10.9 0.0 1.3 1 0 0 1 1 1 0 Periplasmic sensor domain found in signal transduction proteins DUF4059 PF13268.6 RKO93537.1 - 0.0038 17.6 3.2 1.5 9.2 0.9 3.3 2 0 0 2 2 2 2 Protein of unknown function (DUF4059) DUF3176 PF11374.8 RKO93537.1 - 0.13 12.5 2.2 0.25 11.6 0.4 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3176) An_peroxidase PF03098.15 RKO93538.1 - 1.2e-75 255.1 0.0 3.7e-41 141.3 0.0 3.1 1 1 2 3 3 3 3 Animal haem peroxidase DOMON PF03351.17 RKO93538.1 - 2.6e-10 40.6 0.0 5.4e-10 39.6 0.0 1.5 1 0 0 1 1 1 1 DOMON domain Cytochrom_B561 PF03188.16 RKO93538.1 - 9.4e-07 29.0 5.3 2.1e-06 27.9 5.3 1.6 1 1 0 1 1 1 1 Eukaryotic cytochrome b561 DUF3784 PF12650.7 RKO93538.1 - 0.044 14.0 2.7 5.1 7.4 0.4 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3784) Ni_hydr_CYTB PF01292.20 RKO93538.1 - 0.13 11.9 2.9 2.1 7.9 0.1 2.7 1 1 1 2 2 2 0 Prokaryotic cytochrome b561 An_peroxidase PF03098.15 RKO93539.1 - 5.9e-73 246.2 0.0 1e-66 225.6 0.0 2.9 1 1 1 2 2 2 2 Animal haem peroxidase FAD_binding_6 PF00970.24 RKO93539.1 - 2.2e-08 34.4 0.0 5.9e-08 33.0 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain DOMON PF03351.17 RKO93539.1 - 3.6e-08 33.7 0.4 8.4e-08 32.5 0.4 1.6 1 0 0 1 1 1 1 DOMON domain Cytochrom_B561 PF03188.16 RKO93539.1 - 2.5e-05 24.4 5.3 0.00016 21.8 5.4 2.3 2 1 0 2 2 2 1 Eukaryotic cytochrome b561 NAD_binding_1 PF00175.21 RKO93539.1 - 0.0027 18.3 0.0 0.014 16.0 0.0 2.3 2 1 0 2 2 2 1 Oxidoreductase NAD-binding domain Ni_hydr_CYTB PF01292.20 RKO93539.1 - 0.086 12.4 6.3 5.1 6.6 6.3 2.9 1 1 0 1 1 1 0 Prokaryotic cytochrome b561 DUF4079 PF13301.6 RKO93539.1 - 1.4 9.0 5.1 16 5.7 5.1 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) DUF4405 PF14358.6 RKO93539.1 - 5.3 7.7 6.5 0.94 10.1 0.7 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4405) DUF1275 PF06912.11 RKO93541.1 - 1.4e-28 100.1 17.2 2e-28 99.6 17.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) Thioesterase PF00975.20 RKO93543.1 - 0.00063 19.9 0.1 0.0054 16.9 0.0 2.0 2 0 0 2 2 2 1 Thioesterase domain Acyl_transf_1 PF00698.21 RKO93543.1 - 0.095 12.2 0.0 0.62 9.5 0.0 1.9 2 0 0 2 2 2 0 Acyl transferase domain OPT PF03169.15 RKO93544.1 - 4.4e-71 240.3 19.6 6.9e-71 239.7 19.6 1.2 1 0 0 1 1 1 1 OPT oligopeptide transporter protein OPT PF03169.15 RKO93545.1 - 8.5e-138 460.7 44.2 9.6e-138 460.5 44.2 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein GATA PF00320.27 RKO93546.1 - 3.1e-11 42.7 5.7 5e-11 42.0 5.7 1.3 1 0 0 1 1 1 1 GATA zinc finger Kelch_6 PF13964.6 RKO93547.1 - 2.6e-08 33.8 11.3 0.4 11.0 0.0 5.5 3 2 2 5 5 5 4 Kelch motif Kelch_1 PF01344.25 RKO93547.1 - 1.3e-07 31.1 6.4 0.0019 17.8 0.1 4.1 3 0 0 3 3 3 3 Kelch motif SH3_9 PF14604.6 RKO93547.1 - 0.00086 19.1 0.0 0.0019 18.0 0.0 1.6 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO93547.1 - 0.02 14.5 0.0 0.035 13.7 0.0 1.4 1 0 0 1 1 1 0 SH3 domain Kelch_4 PF13418.6 RKO93547.1 - 0.02 14.9 12.2 1.7 8.7 0.0 5.3 5 1 0 5 5 5 0 Galactose oxidase, central domain Kelch_3 PF13415.6 RKO93547.1 - 0.031 14.6 13.3 2 8.8 0.9 5.2 4 1 0 4 4 4 0 Galactose oxidase, central domain Kelch_5 PF13854.6 RKO93547.1 - 0.11 12.5 4.2 1.2 9.2 0.0 3.8 4 0 0 4 4 4 0 Kelch motif GYF PF02213.16 RKO93548.1 - 0.14 11.9 0.1 0.23 11.1 0.1 1.4 1 0 0 1 1 1 0 GYF domain Asp PF00026.23 RKO93550.1 - 3.3e-32 112.2 0.0 4.7e-32 111.7 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 RKO93550.1 - 0.0073 16.6 0.4 0.73 10.0 0.1 2.9 2 1 0 2 2 2 1 Xylanase inhibitor N-terminal HIT PF01230.23 RKO93551.1 - 2.3e-21 76.3 0.0 2.5e-21 76.2 0.0 1.0 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 RKO93551.1 - 9.8e-06 26.0 0.0 1.2e-05 25.7 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding GalP_UDP_tr_C PF02744.17 RKO93551.1 - 0.14 11.8 0.0 0.17 11.6 0.0 1.2 1 1 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain BUD22 PF09073.10 RKO93552.1 - 0.00067 19.1 11.1 0.0016 17.8 11.1 1.6 1 0 0 1 1 1 1 BUD22 Nop14 PF04147.12 RKO93552.1 - 1.2 7.3 25.6 1.8 6.7 25.6 1.1 1 0 0 1 1 1 0 Nop14-like family RPN2_C PF18004.1 RKO93552.1 - 1.4 8.8 5.6 3.1 7.7 5.6 1.5 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain DUF4820 PF16091.5 RKO93552.1 - 7.9 5.8 5.8 14 4.9 5.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) CDC45 PF02724.14 RKO93552.1 - 9.2 4.4 14.8 17 3.6 14.8 1.4 1 0 0 1 1 1 0 CDC45-like protein AA_kinase PF00696.28 RKO93553.1 - 5.9e-38 130.8 0.4 8.6e-38 130.3 0.4 1.2 1 0 0 1 1 1 1 Amino acid kinase family PUA PF01472.20 RKO93553.1 - 3.1e-16 59.1 2.7 3.5e-16 58.9 1.0 2.1 2 0 0 2 2 2 1 PUA domain D5_N PF08706.11 RKO93559.1 - 1.1e-09 38.7 0.1 2.2e-09 37.7 0.1 1.5 1 0 0 1 1 1 1 D5 N terminal like FKS1_dom1 PF14288.6 RKO93559.1 - 0.058 13.7 0.0 2.2 8.6 0.0 2.5 2 0 0 2 2 2 0 1,3-beta-glucan synthase subunit FKS1, domain-1 AhpC-TSA_2 PF13911.6 RKO93559.1 - 0.17 12.0 0.0 0.32 11.1 0.0 1.4 1 0 0 1 1 1 0 AhpC/TSA antioxidant enzyme PknG_TPR PF16918.5 RKO93560.1 - 1.1 7.9 3.8 2.9 6.5 0.0 2.6 3 0 0 3 3 3 0 Protein kinase G tetratricopeptide repeat Ricin_B_lectin PF00652.22 RKO93561.1 - 1.1e-05 25.7 0.1 1.6e-05 25.2 0.1 1.2 1 0 0 1 1 1 1 Ricin-type beta-trefoil lectin domain ANF_receptor PF01094.28 RKO93561.1 - 0.025 13.7 0.0 0.035 13.2 0.0 1.2 1 0 0 1 1 1 0 Receptor family ligand binding region Vps53_N PF04100.12 RKO93562.1 - 0.081 11.9 0.2 0.13 11.2 0.2 1.2 1 0 0 1 1 1 0 Vps53-like, N-terminal LRR_8 PF13855.6 RKO93564.1 - 5.4e-11 42.1 5.1 0.00011 21.9 0.1 3.3 1 1 3 4 4 4 4 Leucine rich repeat LRR_4 PF12799.7 RKO93564.1 - 1.5e-06 28.4 3.0 0.0084 16.5 0.0 3.9 2 1 4 6 6 6 4 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 RKO93564.1 - 3.8e-06 26.5 1.1 0.00018 21.1 0.1 2.3 1 1 1 2 2 2 2 Leucine-rich repeat RNase_PH PF01138.21 RKO93565.1 - 3.4e-21 76.1 0.0 4.1e-21 75.8 0.0 1.1 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 Carn_acyltransf PF00755.20 RKO93566.1 - 5e-173 576.9 0.0 5.7e-173 576.7 0.0 1.0 1 0 0 1 1 1 1 Choline/Carnitine o-acyltransferase Shisa PF13908.6 RKO93567.1 - 0.73 10.1 3.1 0.81 9.9 3.1 1.1 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator PAP1 PF08601.10 RKO93567.1 - 3.4 7.3 6.4 3.7 7.2 6.4 1.1 1 0 0 1 1 1 0 Transcription factor PAP1 WD40 PF00400.32 RKO93568.1 - 3.1e-11 43.6 2.1 2.1 9.4 0.2 6.1 6 0 0 6 6 6 5 WD domain, G-beta repeat Spc24 PF08286.11 RKO93569.1 - 1.4e-17 63.8 0.4 2.1e-17 63.2 0.1 1.5 2 0 0 2 2 2 1 Spc24 subunit of Ndc80 MIF4G_like_2 PF09090.11 RKO93569.1 - 0.075 12.5 0.7 0.07 12.6 0.7 1.1 1 0 0 1 1 1 0 MIF4G like APG6_N PF17675.1 RKO93569.1 - 0.36 11.4 6.6 0.59 10.7 6.6 1.4 1 0 0 1 1 1 0 Apg6 coiled-coil region Oxysterol_BP PF01237.18 RKO93570.1 - 6.3e-30 104.3 0.0 2.6e-28 98.9 0.0 2.0 1 1 0 1 1 1 1 Oxysterol-binding protein Peptidase_S8 PF00082.22 RKO93571.1 - 1.7e-36 126.0 0.7 3.2e-36 125.1 0.5 1.5 2 0 0 2 2 2 1 Subtilase family P_proprotein PF01483.20 RKO93571.1 - 9.4e-28 96.1 1.1 1.8e-27 95.2 1.1 1.5 1 0 0 1 1 1 1 Proprotein convertase P-domain S8_pro-domain PF16470.5 RKO93571.1 - 0.18 12.6 2.1 0.4 11.5 2.1 1.6 1 0 0 1 1 1 0 Peptidase S8 pro-domain CLTH PF10607.9 RKO93572.1 - 2.8e-21 76.0 0.0 3.6e-21 75.6 0.0 1.1 1 0 0 1 1 1 1 CTLH/CRA C-terminal to LisH motif domain LisH PF08513.11 RKO93572.1 - 7.3e-05 22.6 0.1 0.00022 21.1 0.0 1.9 2 0 0 2 2 2 1 LisH CH PF00307.31 RKO93573.1 - 4.5e-05 23.6 0.0 6e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Calponin homology (CH) domain RhoGEF PF00621.20 RKO93574.1 - 5.9e-20 72.3 0.9 1.3e-18 67.9 0.9 2.5 1 1 0 1 1 1 1 RhoGEF domain PH PF00169.29 RKO93574.1 - 4.9e-10 39.9 0.0 1e-09 38.8 0.0 1.5 1 0 0 1 1 1 1 PH domain IQ_SEC7_PH PF16453.5 RKO93574.1 - 8.1e-05 22.6 0.3 0.00034 20.6 0.0 2.1 2 0 0 2 2 2 1 PH domain PH_16 PF17838.1 RKO93574.1 - 0.013 15.3 2.9 0.044 13.6 0.6 2.7 2 1 0 2 2 2 0 PH domain PH_13 PF16652.5 RKO93574.1 - 0.033 14.0 2.3 2.8 7.8 2.3 2.4 1 1 0 1 1 1 0 Pleckstrin homology domain PH_10 PF15411.6 RKO93574.1 - 0.091 13.0 1.2 0.16 12.2 0.1 2.1 2 1 0 2 2 2 0 Pleckstrin homology domain Pdase_C33_assoc PF14756.6 RKO93574.1 - 0.21 11.5 0.6 0.57 10.1 0.6 1.7 1 0 0 1 1 1 0 Peptidase_C33-associated domain DUF4164 PF13747.6 RKO93574.1 - 0.48 10.7 5.4 0.39 11.0 2.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) SKA2 PF16740.5 RKO93574.1 - 3.1 7.6 7.1 0.48 10.2 0.3 2.8 4 0 0 4 4 4 0 Spindle and kinetochore-associated protein 2 Longin PF13774.6 RKO93578.1 - 6.2e-24 83.9 0.1 1.2e-23 82.9 0.1 1.5 1 0 0 1 1 1 1 Regulated-SNARE-like domain SRF-TF PF00319.18 RKO93581.1 - 2.5e-20 71.7 0.1 2.8e-20 71.5 0.1 1.1 1 0 0 1 1 1 1 SRF-type transcription factor (DNA-binding and dimerisation domain) Ephrin_rec_like PF07699.13 RKO93584.1 - 1.2e-05 25.0 4.5 3.3e-05 23.6 4.5 1.7 1 0 0 1 1 1 1 Putative ephrin-receptor like MSC PF09402.10 RKO93584.1 - 0.0097 15.4 2.6 0.015 14.8 2.6 1.2 1 0 0 1 1 1 1 Man1-Src1p-C-terminal domain Phage_GPO PF05929.11 RKO93585.1 - 0.0077 15.9 5.8 0.012 15.2 5.8 1.3 1 1 0 1 1 1 1 Phage capsid scaffolding protein (GPO) serine peptidase ABC_tran_CTD PF16326.5 RKO93585.1 - 0.019 15.2 1.8 0.022 15.0 0.2 1.9 1 1 1 2 2 2 0 ABC transporter C-terminal domain CLZ PF16526.5 RKO93585.1 - 0.13 12.7 0.2 0.25 11.7 0.2 1.5 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF3138 PF11336.8 RKO93585.1 - 2.7 6.5 13.9 3.8 6.0 13.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3138) SOG2 PF10428.9 RKO93585.1 - 3 7.0 19.2 3.4 6.7 19.2 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein TFIIA PF03153.13 RKO93585.1 - 3.2 7.6 9.9 4.3 7.2 9.9 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Mannosyl_trans3 PF11051.8 RKO93587.1 - 2e-31 109.3 0.0 1.7e-22 80.1 0.0 2.1 2 0 0 2 2 2 2 Mannosyltransferase putative RhoGAP PF00620.27 RKO93588.1 - 0.00039 20.3 0.0 0.00074 19.4 0.0 1.3 1 0 0 1 1 1 1 RhoGAP domain Tctex-1 PF03645.13 RKO93590.1 - 4.2e-29 100.8 0.4 5.2e-29 100.5 0.4 1.1 1 0 0 1 1 1 1 Tctex-1 family PG_binding_4 PF12229.8 RKO93590.1 - 0.07 13.4 0.3 0.1 12.9 0.3 1.2 1 0 0 1 1 1 0 Putative peptidoglycan binding domain DUF2967 PF11179.8 RKO93590.1 - 1 7.4 7.5 1.3 7.0 7.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2967) Baculo_PEP_C PF04513.12 RKO93591.1 - 0.031 14.3 34.5 5.4 7.1 0.7 8.6 4 3 4 9 9 9 0 Baculovirus polyhedron envelope protein, PEP, C terminus PPR_3 PF13812.6 RKO93592.1 - 4.2e-11 42.8 0.2 1.9e-08 34.3 0.1 3.4 3 0 0 3 3 3 1 Pentatricopeptide repeat domain PPR_2 PF13041.6 RKO93592.1 - 2.2e-10 40.6 0.0 1.3e-08 34.9 0.2 3.7 4 0 0 4 4 4 1 PPR repeat family PPR_long PF17177.4 RKO93592.1 - 1.9e-05 24.2 0.6 0.42 10.0 0.0 3.7 2 1 1 3 3 3 3 Pentacotripeptide-repeat region of PRORP PPR PF01535.20 RKO93592.1 - 0.0094 16.1 1.7 0.68 10.3 0.0 4.5 6 0 0 6 6 6 1 PPR repeat DEAD PF00270.29 RKO93593.1 - 2.6e-43 147.8 0.2 4.9e-43 146.9 0.2 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO93593.1 - 7.1e-33 113.3 0.1 5.2e-32 110.5 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain AAA_19 PF13245.6 RKO93593.1 - 0.00034 20.9 0.1 0.013 15.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain ResIII PF04851.15 RKO93593.1 - 0.00098 19.2 0.0 0.0022 18.0 0.0 1.7 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_30 PF13604.6 RKO93593.1 - 0.0013 18.5 0.0 0.0021 17.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain UTP25 PF06862.12 RKO93593.1 - 0.01 14.7 0.0 0.71 8.6 0.0 2.3 2 0 0 2 2 2 0 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 AAA_22 PF13401.6 RKO93593.1 - 0.025 14.9 0.3 0.11 12.8 0.3 2.0 1 1 0 1 1 1 0 AAA domain DNA_III_psi PF03603.13 RKO93593.1 - 0.078 13.2 0.0 1.9 8.8 0.0 2.3 2 0 0 2 2 2 0 DNA polymerase III psi subunit Helicase_RecD PF05127.14 RKO93593.1 - 0.079 12.8 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Helicase TPR_2 PF07719.17 RKO93594.1 - 0.096 12.8 0.2 12 6.3 0.1 3.2 2 0 0 2 2 2 0 Tetratricopeptide repeat SNF2_N PF00176.23 RKO93595.1 - 2.1e-47 161.5 0.0 1.7e-39 135.6 0.0 2.4 2 1 1 3 3 3 2 SNF2 family N-terminal domain Helicase_C PF00271.31 RKO93595.1 - 3.1e-15 56.5 0.0 1.2e-14 54.6 0.0 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain zf-C3HC4 PF00097.25 RKO93595.1 - 8.5e-07 28.8 2.9 8.5e-07 28.8 2.9 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 RKO93595.1 - 5.8e-06 26.1 3.0 5.8e-06 26.1 3.0 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 RKO93595.1 - 5.5e-05 22.9 2.7 5.5e-05 22.9 2.7 3.0 2 1 1 3 3 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 RKO93595.1 - 0.00012 21.9 3.1 0.00012 21.9 3.1 2.4 2 0 0 2 2 2 1 zinc-RING finger domain zf-RING_2 PF13639.6 RKO93595.1 - 0.00019 21.7 2.3 0.00019 21.7 2.3 2.7 2 0 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 RKO93595.1 - 0.0011 18.9 0.1 0.0011 18.9 0.1 3.8 3 1 1 4 4 3 1 RING-type zinc-finger Prok-RING_4 PF14447.6 RKO93595.1 - 0.0018 18.1 3.3 0.0018 18.1 3.3 2.4 2 0 0 2 2 1 1 Prokaryotic RING finger family 4 zf-Nse PF11789.8 RKO93595.1 - 0.059 13.2 1.4 0.18 11.6 1.4 1.8 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Zn_Tnp_IS91 PF14319.6 RKO93595.1 - 0.31 11.1 7.4 10 6.2 3.0 2.7 2 0 0 2 2 2 0 Transposase zinc-binding domain ABC_membrane PF00664.23 RKO93599.1 - 9.9e-61 205.8 22.2 5.4e-34 118.1 11.8 2.3 2 0 0 2 2 2 2 ABC transporter transmembrane region ABC_tran PF00005.27 RKO93599.1 - 5.9e-46 156.4 0.0 1.1e-28 100.4 0.0 2.4 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 RKO93599.1 - 4.3e-07 29.6 3.1 0.056 12.9 0.1 3.9 2 2 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 RKO93599.1 - 2.5e-05 23.9 0.6 0.36 10.6 0.1 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.6 RKO93599.1 - 4.4e-05 23.4 1.1 4.1 7.1 0.0 3.8 3 1 1 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 RKO93599.1 - 0.0003 20.8 1.1 0.48 10.5 0.2 2.5 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_16 PF13191.6 RKO93599.1 - 0.00047 20.6 1.8 0.33 11.3 0.0 2.8 2 1 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 RKO93599.1 - 0.00067 20.2 0.5 0.83 10.1 0.0 2.3 2 0 0 2 2 2 2 AAA domain T2SSE PF00437.20 RKO93599.1 - 0.0017 17.5 0.1 0.13 11.3 0.1 2.5 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_22 PF13401.6 RKO93599.1 - 0.0024 18.2 1.6 4.7 7.5 0.0 3.5 3 0 0 3 3 3 1 AAA domain Zeta_toxin PF06414.12 RKO93599.1 - 0.0029 16.9 2.4 0.19 11.0 0.1 2.9 3 0 0 3 3 3 1 Zeta toxin RsgA_GTPase PF03193.16 RKO93599.1 - 0.0045 16.9 0.1 1.3 8.9 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase AAA_24 PF13479.6 RKO93599.1 - 0.006 16.3 0.8 0.088 12.5 0.1 2.5 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.6 RKO93599.1 - 0.0062 16.1 1.8 0.25 10.9 0.1 2.8 3 0 0 3 3 2 1 AAA domain DUF87 PF01935.17 RKO93599.1 - 0.007 16.5 0.6 2.4 8.2 0.1 2.3 2 0 0 2 2 2 1 Helicase HerA, central domain ResIII PF04851.15 RKO93599.1 - 0.041 13.9 0.1 3.5 7.6 0.0 2.6 3 0 0 3 3 2 0 Type III restriction enzyme, res subunit FtsK_SpoIIIE PF01580.18 RKO93599.1 - 0.05 13.0 0.2 2 7.7 0.0 2.4 2 0 0 2 2 2 0 FtsK/SpoIIIE family DEAD PF00270.29 RKO93599.1 - 0.065 13.0 0.4 7.9 6.2 0.0 3.0 3 0 0 3 3 3 0 DEAD/DEAH box helicase AAA_18 PF13238.6 RKO93599.1 - 0.088 13.4 0.0 11 6.6 0.0 2.6 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 RKO93599.1 - 0.1 12.9 1.4 11 6.3 0.0 3.8 3 1 0 3 3 3 0 Putative exonuclease SbcCD, C subunit BCA_ABC_TP_C PF12399.8 RKO93599.1 - 0.13 12.3 0.2 0.29 11.1 0.2 1.7 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter Viral_helicase1 PF01443.18 RKO93599.1 - 0.13 12.0 0.0 0.61 9.8 0.0 2.1 3 0 0 3 3 2 0 Viral (Superfamily 1) RNA helicase AAA_7 PF12775.7 RKO93599.1 - 0.2 11.2 0.1 3.5 7.1 0.0 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region Roc PF08477.13 RKO93599.1 - 0.21 11.8 0.2 29 4.9 0.0 2.7 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase DUF2075 PF09848.9 RKO93599.1 - 0.24 10.6 1.5 0.6 9.3 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA PF00004.29 RKO93599.1 - 0.42 11.1 1.7 5.7 7.4 0.0 2.9 3 0 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) cobW PF02492.19 RKO93599.1 - 2.3 7.8 3.7 2.7 7.5 0.2 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ORC6 PF05460.13 RKO93600.1 - 1.3 8.2 4.6 1.8 7.7 4.6 1.2 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) ABC_membrane PF00664.23 RKO93601.1 - 1.2e-49 169.4 13.3 1.3e-30 107.0 0.4 2.1 2 0 0 2 2 2 2 ABC transporter transmembrane region ABC_tran PF00005.27 RKO93601.1 - 1.4e-14 54.8 0.0 2.2e-14 54.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 RKO93601.1 - 0.00088 19.0 0.2 0.0029 17.3 0.1 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_25 PF13481.6 RKO93601.1 - 0.0043 16.6 0.0 0.011 15.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 RKO93601.1 - 0.006 16.1 0.1 0.8 9.1 0.1 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 RKO93601.1 - 0.0088 16.6 0.0 0.014 15.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain T2SSE PF00437.20 RKO93601.1 - 0.023 13.8 0.0 0.041 12.9 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_16 PF13191.6 RKO93601.1 - 0.032 14.6 0.0 0.083 13.3 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain DUF2075 PF09848.9 RKO93601.1 - 0.05 12.8 0.0 0.077 12.2 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_21 PF13304.6 RKO93601.1 - 0.19 11.5 0.1 0.64 9.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system DMRL_synthase PF00885.19 RKO93602.1 - 3.2e-53 179.3 0.0 3.7e-53 179.1 0.0 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase p450 PF00067.22 RKO93603.1 - 1.6e-29 103.0 0.0 4.4e-29 101.5 0.0 1.6 2 0 0 2 2 2 1 Cytochrome P450 p450 PF00067.22 RKO93604.1 - 1.3e-10 40.6 0.0 5.8e-10 38.5 0.0 1.8 2 0 0 2 2 2 1 Cytochrome P450 DUF4106 PF13388.6 RKO93605.1 - 0.16 11.1 0.2 0.25 10.5 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4106) SH3_9 PF14604.6 RKO93606.1 - 0.00022 21.0 0.0 0.00048 19.9 0.0 1.6 1 0 0 1 1 1 1 Variant SH3 domain DUF2070 PF09843.9 RKO93606.1 - 0.9 7.7 6.6 1.2 7.3 6.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ADH_zinc_N PF00107.26 RKO93607.1 - 2.4e-18 66.4 0.0 4.4e-18 65.5 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 RKO93607.1 - 6.8e-05 23.9 0.0 0.00018 22.6 0.0 1.6 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_N PF08240.12 RKO93607.1 - 0.00025 20.9 0.2 0.0007 19.4 0.0 1.9 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain CoA_binding_2 PF13380.6 RKO93607.1 - 0.00058 20.3 1.3 0.18 12.3 0.0 2.6 2 1 1 3 3 3 2 CoA binding domain adh_short PF00106.25 RKO93607.1 - 0.051 13.0 0.1 0.077 12.4 0.1 1.2 1 0 0 1 1 1 0 short chain dehydrogenase Proteasome PF00227.26 RKO93608.1 - 1.9e-29 102.5 0.2 2.3e-29 102.3 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit zf-RING_2 PF13639.6 RKO93609.1 - 9.4e-05 22.7 7.8 9.4e-05 22.7 7.8 1.7 2 0 0 2 2 2 1 Ring finger domain PHD PF00628.29 RKO93609.1 - 0.016 15.1 6.5 0.027 14.4 6.5 1.4 1 0 0 1 1 1 0 PHD-finger Zf_RING PF16744.5 RKO93609.1 - 0.041 14.0 3.1 0.087 13.0 3.1 1.5 1 0 0 1 1 1 0 KIAA1045 RING finger Prok-RING_1 PF14446.6 RKO93609.1 - 0.047 13.6 5.5 0.16 11.9 3.8 2.1 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 zf-RING_UBOX PF13445.6 RKO93609.1 - 0.05 13.6 5.2 0.11 12.5 5.2 1.7 1 0 0 1 1 1 0 RING-type zinc-finger FYVE PF01363.21 RKO93609.1 - 0.056 13.6 5.4 0.11 12.7 5.4 1.4 1 0 0 1 1 1 0 FYVE zinc finger zf-C3HC4_3 PF13920.6 RKO93609.1 - 0.081 12.8 6.2 0.19 11.6 6.2 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 RKO93609.1 - 0.12 12.4 8.4 0.23 11.4 8.4 1.5 1 0 0 1 1 1 0 zinc-RING finger domain FANCL_C PF11793.8 RKO93609.1 - 0.75 10.0 6.5 3 8.1 5.6 2.2 2 1 0 2 2 2 0 FANCL C-terminal domain K_channel_TID PF07941.11 RKO93609.1 - 1.6 9.3 6.5 8.6 6.9 2.5 2.3 2 0 0 2 2 2 0 Potassium channel Kv1.4 tandem inactivation domain zf-C3HC4_2 PF13923.6 RKO93609.1 - 2.4 8.1 8.9 0.36 10.7 4.3 2.1 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING-like PF08746.11 RKO93609.1 - 8.8 6.7 11.3 0.75 10.1 6.3 1.8 2 0 0 2 2 1 0 RING-like domain OrfB_Zn_ribbon PF07282.11 RKO93612.1 - 0.039 13.9 0.1 0.11 12.5 0.1 1.8 1 0 0 1 1 1 0 Putative transposase DNA-binding domain SET PF00856.28 RKO93613.1 - 1e-08 35.8 0.0 1e-08 35.8 0.0 3.5 2 1 0 2 2 2 1 SET domain PNISR PF15996.5 RKO93614.1 - 0.036 14.4 0.2 0.036 14.4 0.2 1.6 2 0 0 2 2 2 0 Arginine/serine-rich protein PNISR WD40 PF00400.32 RKO93616.1 - 2e-07 31.6 3.9 0.54 11.2 0.0 5.8 5 1 0 5 5 5 3 WD domain, G-beta repeat Lebercilin PF15619.6 RKO93617.1 - 3.4e-13 49.7 24.7 6.8e-13 48.7 24.7 1.5 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease Phi-29_GP16_7 PF06720.11 RKO93617.1 - 0.023 14.5 3.9 0.052 13.4 3.9 1.5 1 0 0 1 1 1 0 Bacteriophage phi-29 early protein GP16.7 Y_phosphatase2 PF03162.13 RKO93618.1 - 2.7e-57 192.9 0.0 3e-57 192.8 0.0 1.0 1 0 0 1 1 1 1 Tyrosine phosphatase family DSPc PF00782.20 RKO93618.1 - 0.0001 22.1 0.0 0.00013 21.7 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase3 PF13350.6 RKO93618.1 - 0.00061 19.8 0.0 0.00065 19.7 0.0 1.2 1 0 0 1 1 1 1 Tyrosine phosphatase family Y_phosphatase PF00102.27 RKO93618.1 - 0.014 15.0 0.0 0.016 14.7 0.0 1.3 1 0 0 1 1 1 0 Protein-tyrosine phosphatase GWT1 PF06423.12 RKO93619.1 - 1.2e-29 103.3 1.5 1.2e-29 103.3 1.5 2.2 2 1 0 2 2 2 1 GWT1 7tm_3 PF00003.22 RKO93620.1 - 2e-19 70.3 11.0 4e-19 69.3 11.0 1.5 1 1 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR ANF_receptor PF01094.28 RKO93620.1 - 1.2e-15 57.5 0.3 1.6e-08 34.0 0.2 2.4 2 0 0 2 2 2 2 Receptor family ligand binding region COX7a PF02238.15 RKO93620.1 - 3.4 8.2 5.7 31 5.1 0.0 3.6 4 0 0 4 4 4 0 Cytochrome c oxidase subunit VII PalH PF08733.10 RKO93620.1 - 4.1 6.3 9.9 1 8.3 4.1 2.2 1 1 1 2 2 2 0 PalH/RIM21 AXIN1_TNKS_BD PF16646.5 RKO93626.1 - 0.0068 17.3 0.2 0.014 16.3 0.2 1.5 1 0 0 1 1 1 1 Axin-1 tankyrase binding domain gag_pre-integrs PF13976.6 RKO93626.1 - 0.061 13.2 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 GAG-pre-integrase domain PE PF00934.20 RKO93627.1 - 0.06 13.7 0.8 0.098 13.0 0.8 1.3 1 0 0 1 1 1 0 PE family Rubella_Capsid PF05750.11 RKO93627.1 - 0.31 10.6 6.3 0.22 11.1 3.2 1.9 1 1 0 2 2 2 0 Rubella capsid protein PHD PF00628.29 RKO93628.1 - 2.3e-05 24.2 1.1 7e-05 22.6 0.1 2.2 2 0 0 2 2 2 1 PHD-finger PHD_4 PF16866.5 RKO93628.1 - 0.033 14.3 0.1 0.09 12.9 0.1 1.7 1 0 0 1 1 1 0 PHD-finger Zf_RING PF16744.5 RKO93628.1 - 0.099 12.8 0.6 2.4 8.4 0.1 2.5 2 0 0 2 2 2 0 KIAA1045 RING finger zf-HC5HC2H_2 PF13832.6 RKO93628.1 - 0.78 9.9 6.0 24 5.2 0.0 3.3 3 0 0 3 3 3 0 PHD-zinc-finger like domain DUF5582 PF17819.1 RKO93629.1 - 9.2e-06 26.2 0.0 1.6e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5582) EF-hand_1 PF00036.32 RKO93629.1 - 0.00053 19.3 0.0 0.0014 18.0 0.0 1.7 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 RKO93629.1 - 0.0021 17.9 0.0 0.0052 16.6 0.0 1.6 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 RKO93629.1 - 0.0082 16.6 0.0 0.025 15.0 0.0 1.8 2 0 0 2 2 2 1 EF-hand domain pair Dpy-30 PF05186.13 RKO93629.1 - 0.012 15.3 0.1 0.012 15.3 0.1 1.7 2 0 0 2 2 2 0 Dpy-30 motif RIIa PF02197.17 RKO93629.1 - 0.12 12.1 0.1 0.3 10.8 0.1 1.7 1 0 0 1 1 1 0 Regulatory subunit of type II PKA R-subunit EF-hand_8 PF13833.6 RKO93629.1 - 0.21 11.5 0.0 2.2 8.2 0.0 2.2 2 0 0 2 2 2 0 EF-hand domain pair CCSAP PF15748.5 RKO93630.1 - 5.8e-07 29.9 4.5 1.4e-05 25.4 0.8 2.4 2 0 0 2 2 2 2 Centriole, cilia and spindle-associated AAA_16 PF13191.6 RKO93631.1 - 0.0011 19.3 0.0 0.0048 17.3 0.0 2.2 1 0 0 1 1 1 1 AAA ATPase domain NACHT PF05729.12 RKO93631.1 - 0.12 12.3 0.0 0.73 9.7 0.0 2.3 2 0 0 2 2 2 0 NACHT domain DUF4200 PF13863.6 RKO93633.1 - 1.2e-18 67.6 20.2 4.3e-11 43.3 4.3 4.1 3 1 1 4 4 4 2 Domain of unknown function (DUF4200) NiFe-hyd_HybE PF11939.8 RKO93633.1 - 0.12 12.3 0.1 0.36 10.7 0.0 1.8 1 1 0 1 1 1 0 [NiFe]-hydrogenase assembly, chaperone, HybE FUSC PF04632.12 RKO93633.1 - 0.48 8.9 0.5 0.58 8.6 0.5 1.2 1 0 0 1 1 1 0 Fusaric acid resistance protein family AMP-binding PF00501.28 RKO93635.1 - 3.4e-94 315.8 0.0 4.4e-94 315.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme F-box-like PF12937.7 RKO93636.1 - 0.00012 21.9 2.0 0.00032 20.5 2.0 1.7 1 0 0 1 1 1 1 F-box-like Peptidase_M1 PF01433.20 RKO93637.1 - 1.9e-69 233.6 0.3 4.1e-69 232.5 0.1 1.6 2 0 0 2 2 2 1 Peptidase family M1 domain ERAP1_C PF11838.8 RKO93637.1 - 1.6e-55 188.9 3.8 2.9e-55 188.1 3.8 1.3 1 0 0 1 1 1 1 ERAP1-like C-terminal domain Peptidase_M1_N PF17900.1 RKO93637.1 - 8.1e-41 140.3 0.0 1.6e-40 139.3 0.0 1.5 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain RhoGEF PF00621.20 RKO93640.1 - 1.8e-38 132.6 0.7 4.4e-38 131.4 0.7 1.7 1 0 0 1 1 1 1 RhoGEF domain HR1 PF02185.16 RKO93640.1 - 4.1e-07 30.0 2.7 8e-07 29.1 1.5 2.2 2 0 0 2 2 2 1 Hr1 repeat C1_1 PF00130.22 RKO93640.1 - 2.4e-06 27.3 9.6 4.8e-06 26.4 9.6 1.5 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Uds1 PF15456.6 RKO93640.1 - 0.00043 20.4 4.1 0.00043 20.4 4.1 1.9 2 0 0 2 2 2 1 Up-regulated During Septation C1_2 PF03107.16 RKO93640.1 - 0.0036 17.6 3.8 0.0089 16.3 3.8 1.7 1 0 0 1 1 1 1 C1 domain PH_5 PF15405.6 RKO93640.1 - 0.0097 16.0 0.0 0.023 14.8 0.0 1.6 1 0 0 1 1 1 1 Pleckstrin homology domain RA PF00788.23 RKO93640.1 - 0.011 16.3 0.0 0.028 15.0 0.0 1.6 1 0 0 1 1 1 0 Ras association (RalGDS/AF-6) domain PH_13 PF16652.5 RKO93640.1 - 0.016 15.0 0.0 0.11 12.4 0.0 2.4 1 1 0 1 1 1 0 Pleckstrin homology domain IQ_SEC7_PH PF16453.5 RKO93640.1 - 0.12 12.4 0.1 0.25 11.3 0.1 1.5 1 0 0 1 1 1 0 PH domain DZR PF12773.7 RKO93640.1 - 0.41 10.7 8.7 0.23 11.5 6.1 1.9 2 0 0 2 2 2 0 Double zinc ribbon HECT_2 PF09814.9 RKO93642.1 - 2.9e-14 52.7 0.0 2.9e-13 49.4 0.0 2.0 1 1 0 1 1 1 1 HECT-like Ubiquitin-conjugating enzyme (E2)-binding Pkinase PF00069.25 RKO93643.1 - 9.6e-38 130.0 0.0 1.1e-37 129.8 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO93643.1 - 7.9e-16 58.1 0.0 9.9e-16 57.8 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO93643.1 - 0.0016 17.8 0.0 0.0043 16.4 0.0 1.7 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 RKO93643.1 - 0.0019 18.2 0.1 0.0028 17.6 0.1 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 RKO93643.1 - 0.012 15.2 0.0 0.015 14.9 0.0 1.1 1 0 0 1 1 1 0 Choline/ethanolamine kinase Haspin_kinase PF12330.8 RKO93643.1 - 0.062 12.2 0.1 0.087 11.8 0.1 1.1 1 0 0 1 1 1 0 Haspin like kinase domain KA1 PF02149.19 RKO93644.1 - 5.8e-16 58.0 0.0 9.4e-16 57.3 0.0 1.3 1 0 0 1 1 1 1 Kinase associated domain 1 AdenylateSensor PF16579.5 RKO93644.1 - 0.015 15.7 0.0 0.018 15.5 0.0 1.1 1 0 0 1 1 1 0 Adenylate sensor of SNF1-like protein kinase Na_H_Exchanger PF00999.21 RKO93646.1 - 1.1e-58 198.8 42.6 1.3e-58 198.6 42.6 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TPR_19 PF14559.6 RKO93648.1 - 0.044 14.3 1.5 17 6.0 0.0 3.3 2 1 1 3 3 3 0 Tetratricopeptide repeat DUF1192 PF06698.11 RKO93648.1 - 2.6 8.1 5.9 0.21 11.7 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) TFIIA PF03153.13 RKO93649.1 - 0.0071 16.4 18.9 0.013 15.5 18.9 1.4 1 0 0 1 1 1 1 Transcription factor IIA, alpha/beta subunit Nop14 PF04147.12 RKO93649.1 - 2 6.5 15.6 2.7 6.1 15.6 1.1 1 0 0 1 1 1 0 Nop14-like family CDC45 PF02724.14 RKO93649.1 - 2.4 6.4 12.2 3.5 5.8 12.2 1.1 1 0 0 1 1 1 0 CDC45-like protein DHC_N1 PF08385.12 RKO93650.1 - 1.9e-162 541.8 6.5 1.9e-162 541.8 6.5 3.4 4 0 0 4 4 4 1 Dynein heavy chain, N-terminal region 1 AAA_6 PF12774.7 RKO93650.1 - 3.9e-160 532.2 0.1 6.7e-156 518.3 0.0 3.2 3 0 0 3 3 2 2 Hydrolytic ATP binding site of dynein motor region DHC_N2 PF08393.13 RKO93650.1 - 2.9e-133 444.8 4.5 2.9e-133 444.8 4.5 5.6 7 0 0 7 7 7 1 Dynein heavy chain, N-terminal region 2 AAA_8 PF12780.7 RKO93650.1 - 7.8e-104 346.6 4.6 1.3e-102 342.6 0.0 3.9 4 0 0 4 4 4 1 P-loop containing dynein motor region D4 Dynein_C PF18199.1 RKO93650.1 - 3.8e-98 328.5 0.0 1.6e-97 326.5 0.0 2.2 2 0 0 2 2 1 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 RKO93650.1 - 3.6e-89 297.6 1.5 3.6e-89 297.6 1.5 4.5 5 0 0 5 5 4 1 ATP-binding dynein motor region AAA_7 PF12775.7 RKO93650.1 - 3e-72 241.9 3.9 5.3e-67 224.8 0.0 4.7 4 0 0 4 4 4 2 P-loop containing dynein motor region AAA_lid_11 PF18198.1 RKO93650.1 - 1.4e-56 190.8 0.0 3.4e-56 189.6 0.0 1.7 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain MT PF12777.7 RKO93650.1 - 1.9e-53 181.7 8.3 4.7e-53 180.4 8.3 1.7 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Dynein_heavy PF03028.15 RKO93650.1 - 3.5e-45 152.9 0.0 3.4e-43 146.5 0.0 3.9 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain Dynein_AAA_lid PF17852.1 RKO93650.1 - 7.3e-32 110.2 0.1 3.3e-31 108.1 0.1 2.3 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_5 PF07728.14 RKO93650.1 - 8.7e-29 100.3 0.0 9.3e-12 45.1 0.0 5.5 4 1 0 4 4 4 4 AAA domain (dynein-related subfamily) AAA_lid_1 PF17857.1 RKO93650.1 - 3.5e-18 65.7 9.1 4.2e-18 65.4 0.7 3.6 3 0 0 3 3 2 1 AAA+ lid domain AAA PF00004.29 RKO93650.1 - 2.1e-08 34.7 1.1 0.11 12.9 0.0 5.3 4 0 0 4 4 4 2 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 RKO93650.1 - 1.5e-07 31.7 0.0 0.095 13.0 0.0 5.3 4 0 0 4 4 4 1 AAA domain AAA_16 PF13191.6 RKO93650.1 - 5.9e-06 26.8 3.4 4.8 7.5 0.0 6.2 6 0 0 6 6 5 1 AAA ATPase domain DUF815 PF05673.13 RKO93650.1 - 2e-05 23.9 1.7 0.18 11.0 0.1 4.4 4 0 0 4 4 4 2 Protein of unknown function (DUF815) AAA_18 PF13238.6 RKO93650.1 - 7.8e-05 23.2 0.3 1.5 9.3 0.0 4.0 3 0 0 3 3 3 2 AAA domain Sigma54_activat PF00158.26 RKO93650.1 - 0.00015 21.5 0.2 1.7 8.3 0.0 3.8 3 0 0 3 3 3 2 Sigma-54 interaction domain ABC_tran PF00005.27 RKO93650.1 - 0.0017 18.9 2.8 1.5 9.4 0.1 4.8 4 0 0 4 4 3 1 ABC transporter Mg_chelatase PF01078.21 RKO93650.1 - 0.0021 17.5 0.1 9.7 5.5 0.0 4.4 4 0 0 4 4 4 0 Magnesium chelatase, subunit ChlI AAA_29 PF13555.6 RKO93650.1 - 0.004 16.9 3.8 0.67 9.7 0.1 3.6 3 0 0 3 3 3 1 P-loop containing region of AAA domain AAA_33 PF13671.6 RKO93650.1 - 0.005 17.0 1.3 21 5.2 0.0 4.2 4 0 0 4 4 3 0 AAA domain TsaE PF02367.17 RKO93650.1 - 0.0051 16.8 1.0 1.9 8.5 0.0 3.7 3 0 0 3 3 3 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 RKO93650.1 - 0.0069 16.1 0.7 22 4.7 0.1 3.7 3 0 0 3 3 3 0 AAA domain FtsK_SpoIIIE PF01580.18 RKO93650.1 - 0.022 14.1 0.3 0.4 10.0 0.1 2.9 3 0 0 3 3 2 0 FtsK/SpoIIIE family T3SSipB PF16535.5 RKO93650.1 - 0.028 14.9 21.3 0.064 13.7 0.8 4.2 3 1 0 3 3 3 0 Type III cell invasion protein SipB T2SSE PF00437.20 RKO93650.1 - 0.061 12.4 0.3 3.2 6.7 0.0 3.1 3 0 0 3 3 3 0 Type II/IV secretion system protein Zeta_toxin PF06414.12 RKO93650.1 - 0.069 12.4 0.3 3.6 6.8 0.0 3.0 3 0 0 3 3 3 0 Zeta toxin PduV-EutP PF10662.9 RKO93650.1 - 0.073 12.8 0.2 13 5.5 0.0 3.0 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation RNA_helicase PF00910.22 RKO93650.1 - 0.11 12.9 0.3 44 4.5 0.0 3.7 3 0 0 3 3 3 0 RNA helicase DUF4201 PF13870.6 RKO93650.1 - 0.12 12.1 20.3 0.24 11.1 10.0 3.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4201) Roc PF08477.13 RKO93650.1 - 0.18 12.1 1.4 1.2 9.3 0.1 2.9 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_19 PF13245.6 RKO93650.1 - 0.26 11.6 1.0 81 3.5 0.0 3.6 3 0 0 3 3 3 0 AAA domain PhoH PF02562.16 RKO93650.1 - 0.35 10.3 2.8 47 3.3 0.0 4.3 5 0 0 5 5 4 0 PhoH-like protein gag_pre-integrs PF13976.6 RKO93651.1 - 0.017 14.9 0.0 0.046 13.6 0.0 1.7 1 0 0 1 1 1 0 GAG-pre-integrase domain Asp_protease_2 PF13650.6 RKO93654.1 - 0.022 15.4 0.0 0.062 13.9 0.0 1.7 2 0 0 2 2 2 0 Aspartyl protease gag-asp_proteas PF13975.6 RKO93654.1 - 0.047 14.3 0.0 0.095 13.3 0.0 1.5 1 0 0 1 1 1 0 gag-polyprotein putative aspartyl protease DUF4428 PF14471.6 RKO93655.1 - 0.28 11.2 0.8 0.65 10.0 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4428) HSV_VP16_C PF12149.8 RKO93656.1 - 1.3 9.2 5.2 0.41 10.8 1.1 2.1 2 0 0 2 2 2 0 Herpes simplex virus virion protein 16 C terminal HypA PF01155.19 RKO93657.1 - 0.015 15.3 0.8 0.051 13.6 0.2 1.9 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Euplotes_phero PF05842.11 RKO93657.1 - 0.96 10.0 9.7 0.051 14.2 2.9 2.1 2 1 1 3 3 3 0 Euplotes octocarinatus mating pheromone protein Kinesin PF00225.23 RKO93658.1 - 1.8e-96 323.0 0.0 2.1e-96 322.8 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO93658.1 - 2.4e-20 73.0 0.0 5.6e-20 71.8 0.0 1.6 1 1 0 1 1 1 1 Microtubule binding FAD_binding_4 PF01565.23 RKO93659.1 - 1.6e-19 70.0 5.8 3.4e-19 69.0 5.8 1.6 1 0 0 1 1 1 1 FAD binding domain P-mevalo_kinase PF04275.14 RKO93659.1 - 1.2e-14 54.2 0.0 2.1e-14 53.4 0.0 1.3 1 0 0 1 1 1 1 Phosphomevalonate kinase Pribosyltran PF00156.27 RKO93659.1 - 5.3e-14 52.0 0.1 1.1e-13 51.0 0.1 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Methyltransf_23 PF13489.6 RKO93659.1 - 3.2e-07 30.4 0.0 2.2e-06 27.6 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 RKO93659.1 - 2.5e-05 24.9 0.0 0.00017 22.3 0.0 2.5 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 RKO93659.1 - 8.8e-05 23.1 0.0 0.00043 20.9 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 RKO93659.1 - 0.002 18.7 0.0 0.0067 17.0 0.0 2.0 1 0 0 1 1 1 1 Methyltransferase domain PDZ_6 PF17820.1 RKO93659.1 - 0.021 14.7 0.1 0.069 13.0 0.1 1.9 1 0 0 1 1 1 0 PDZ domain UPRTase PF14681.6 RKO93659.1 - 0.027 13.9 0.1 0.048 13.1 0.1 1.3 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Rsm22 PF09243.10 RKO93659.1 - 0.11 11.7 0.0 0.2 10.9 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 Ytp1 PF10355.9 RKO93661.1 - 2.7e-32 112.1 27.0 7.4e-31 107.4 23.6 4.0 2 1 0 2 2 2 1 Protein of unknown function (Ytp1) DUF2427 PF10348.9 RKO93661.1 - 1.9e-17 63.0 0.3 1.9e-17 63.0 0.3 2.7 4 0 0 4 4 4 1 Domain of unknown function (DUF2427) FixQ PF05545.11 RKO93661.1 - 0.36 10.8 0.0 0.36 10.8 0.0 3.6 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ Ytp1 PF10355.9 RKO93662.1 - 1.7e-23 83.2 24.0 6.8e-22 78.0 20.0 4.1 1 1 1 2 2 2 1 Protein of unknown function (Ytp1) DUF2427 PF10348.9 RKO93662.1 - 9.3e-09 35.0 0.2 9.3e-09 35.0 0.2 2.8 4 0 0 4 4 4 1 Domain of unknown function (DUF2427) CRPA PF05745.11 RKO93662.1 - 0.012 15.6 0.1 0.024 14.7 0.1 1.5 1 0 0 1 1 1 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) RhoGEF PF00621.20 RKO93664.1 - 3.3e-42 144.8 0.1 6.1e-42 143.9 0.0 1.5 2 0 0 2 2 2 1 RhoGEF domain FYVE PF01363.21 RKO93664.1 - 5.6e-24 84.1 16.9 4.5e-19 68.4 4.4 2.4 2 0 0 2 2 2 2 FYVE zinc finger PH PF00169.29 RKO93664.1 - 6.2e-06 26.7 0.0 1.4e-05 25.6 0.0 1.6 1 0 0 1 1 1 1 PH domain FYVE_2 PF02318.16 RKO93664.1 - 5.3e-05 23.4 15.4 0.0029 17.8 0.7 2.5 2 0 0 2 2 2 2 FYVE-type zinc finger C1_2 PF03107.16 RKO93664.1 - 1.7 9.1 22.1 1.4 9.3 6.8 2.7 3 0 0 3 3 3 0 C1 domain RPA_C PF08784.11 RKO93666.1 - 3.8e-09 37.1 0.1 5.3e-09 36.7 0.1 1.1 1 0 0 1 1 1 1 Replication protein A C terminal PAP_assoc PF03828.19 RKO93667.1 - 3.3e-09 36.8 0.2 1.4e-08 34.8 0.2 2.0 1 1 0 1 1 1 1 Cid1 family poly A polymerase NTP_transf_2 PF01909.23 RKO93667.1 - 1.6e-06 28.3 0.0 3e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 RKO93667.1 - 0.062 13.4 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase DEC-1_N PF04625.13 RKO93667.1 - 0.16 11.0 1.4 0.24 10.4 1.4 1.3 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region P2 PF07194.11 RKO93668.1 - 0.24 11.5 1.0 0.56 10.3 0.5 1.9 2 0 0 2 2 2 0 P2 response regulator binding domain PX PF00787.24 RKO93669.1 - 0.03 14.3 0.0 0.054 13.5 0.0 1.4 1 0 0 1 1 1 0 PX domain SH3_2 PF07653.17 RKO93669.1 - 0.22 11.3 0.0 0.4 10.4 0.0 1.4 1 0 0 1 1 1 0 Variant SH3 domain SUZ PF12752.7 RKO93669.1 - 0.84 10.4 4.7 1.2 10.0 0.0 3.0 2 1 0 2 2 2 0 SUZ domain DUF2205 PF10224.9 RKO93670.1 - 0.0074 16.3 0.9 0.13 12.3 0.0 3.6 2 0 0 2 2 2 1 Short coiled-coil protein Baculo_PEP_C PF04513.12 RKO93670.1 - 0.0088 16.1 16.6 3.5 7.7 0.1 6.7 5 2 1 6 6 6 2 Baculovirus polyhedron envelope protein, PEP, C terminus PH PF00169.29 RKO93670.1 - 0.017 15.6 0.0 0.033 14.7 0.0 1.5 1 0 0 1 1 1 0 PH domain CEP63 PF17045.5 RKO93670.1 - 0.037 13.9 5.4 0.79 9.6 0.7 3.4 4 0 0 4 4 4 0 Centrosomal protein of 63 kDa NPV_P10 PF05531.12 RKO93670.1 - 0.053 14.0 15.0 9.4 6.8 0.0 7.9 7 2 1 9 9 9 0 Nucleopolyhedrovirus P10 protein DUF3535 PF12054.8 RKO93670.1 - 0.16 11.1 2.4 0.27 10.4 0.0 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF3535) HAUS-augmin3 PF14932.6 RKO93670.1 - 0.25 10.9 2.3 0.69 9.4 0.3 2.7 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 NOA36 PF06524.12 RKO93670.1 - 0.28 10.4 2.7 0.55 9.5 2.7 1.4 1 0 0 1 1 1 0 NOA36 protein Corona_S2 PF01601.16 RKO93670.1 - 0.29 9.6 3.9 0.075 11.5 0.1 1.8 2 0 0 2 2 2 0 Coronavirus S2 glycoprotein THOC7 PF05615.13 RKO93670.1 - 0.34 11.2 11.7 0.13 12.6 0.3 4.1 4 1 0 4 4 4 0 Tho complex subunit 7 Sigma70_ner PF04546.13 RKO93670.1 - 0.34 10.7 16.3 11 5.8 0.4 4.0 4 0 0 4 4 4 0 Sigma-70, non-essential region Fez1 PF06818.15 RKO93670.1 - 0.41 11.1 17.0 1.7 9.1 0.0 4.3 3 1 1 4 4 4 0 Fez1 JIP_LZII PF16471.5 RKO93670.1 - 1.4 9.1 7.1 0.43 10.8 0.7 3.4 3 0 0 3 3 2 0 JNK-interacting protein leucine zipper II ApoLp-III PF07464.11 RKO93670.1 - 2.9 8.0 10.6 0.19 11.8 0.7 3.7 5 0 0 5 5 4 0 Apolipophorin-III precursor (apoLp-III) Spc7 PF08317.11 RKO93670.1 - 4 6.2 14.3 0.88 8.4 1.3 4.7 7 0 0 7 7 7 0 Spc7 kinetochore protein Clr2_transil PF16761.5 RKO93671.1 - 8.7e-20 71.3 0.1 1.7e-19 70.4 0.1 1.5 1 0 0 1 1 1 1 Transcription-silencing protein, cryptic loci regulator Clr2 ABC2_membrane PF01061.24 RKO93672.1 - 7.3e-36 123.6 16.3 1.3e-35 122.8 16.3 1.3 1 0 0 1 1 1 1 ABC-2 type transporter ABC_tran PF00005.27 RKO93672.1 - 5.3e-25 88.5 0.0 7.8e-25 88.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC2_membrane_3 PF12698.7 RKO93672.1 - 1.9e-07 30.5 23.7 2.9e-07 29.9 23.7 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein AAA_21 PF13304.6 RKO93672.1 - 8.3e-06 25.8 0.2 0.062 13.1 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 RKO93672.1 - 0.02 14.6 0.3 0.045 13.5 0.3 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 RKO93672.1 - 0.049 13.5 1.2 0.068 13.1 0.4 1.6 2 0 0 2 2 2 0 RsgA GTPase Cyclin_N PF00134.23 RKO93675.1 - 6.2e-30 103.6 0.0 1.3e-29 102.5 0.0 1.5 2 0 0 2 2 2 1 Cyclin, N-terminal domain Cyclin_C PF02984.19 RKO93675.1 - 9.3e-19 67.7 0.0 1.5e-18 67.0 0.0 1.3 1 0 0 1 1 1 1 Cyclin, C-terminal domain RabGAP-TBC PF00566.18 RKO93676.1 - 1e-15 58.0 0.0 4.7e-14 52.6 0.0 2.1 2 0 0 2 2 2 2 Rab-GTPase-TBC domain CMAS PF02353.20 RKO93677.1 - 2.8e-39 135.1 0.2 3.8e-39 134.6 0.2 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_31 PF13847.6 RKO93677.1 - 3.8e-16 59.2 0.0 6.3e-16 58.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 RKO93677.1 - 3.3e-14 53.4 0.0 6.5e-14 52.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 RKO93677.1 - 1.4e-12 47.8 0.0 2.5e-12 47.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 RKO93677.1 - 1.7e-11 44.6 0.0 3.6e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 RKO93677.1 - 2.3e-11 44.3 0.0 3.8e-11 43.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 RKO93677.1 - 2.7e-08 33.5 0.0 4.1e-08 33.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.14 RKO93677.1 - 6.2e-06 25.7 0.0 9.8e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_4 PF02390.17 RKO93677.1 - 1.4e-05 24.6 0.0 2.6e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase NodS PF05401.11 RKO93677.1 - 0.00032 20.4 0.0 0.0054 16.4 0.0 2.2 2 0 0 2 2 2 1 Nodulation protein S (NodS) GidB PF02527.15 RKO93677.1 - 0.00074 18.9 0.0 0.0012 18.2 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G FtsJ PF01728.19 RKO93677.1 - 0.0028 17.8 0.0 0.0039 17.3 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase MetW PF07021.12 RKO93677.1 - 0.004 16.8 0.0 0.0084 15.7 0.0 1.5 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PCMT PF01135.19 RKO93677.1 - 0.0089 15.8 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 RKO93677.1 - 0.0091 15.1 0.0 0.016 14.3 0.0 1.4 1 1 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_32 PF13679.6 RKO93677.1 - 0.013 15.5 0.0 0.021 14.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltr_RsmB-F PF01189.17 RKO93677.1 - 0.021 14.5 0.0 0.047 13.3 0.0 1.5 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F Ubie_methyltran PF01209.18 RKO93677.1 - 0.036 13.4 0.0 0.054 12.8 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family DUF938 PF06080.12 RKO93677.1 - 0.088 12.6 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Ccdc124 PF06244.12 RKO93678.1 - 2.7e-29 102.3 0.9 4e-29 101.8 0.9 1.3 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 124 /Oxs1 HMG_box PF00505.19 RKO93678.1 - 0.094 13.2 6.5 0.13 12.7 6.5 1.3 1 0 0 1 1 1 0 HMG (high mobility group) box ApbA PF02558.16 RKO93680.1 - 6.5e-19 68.1 0.0 9.8e-19 67.5 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 RKO93680.1 - 0.011 16.3 0.6 0.022 15.3 0.1 1.8 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent XPG_N PF00752.17 RKO93681.1 - 1.1e-34 118.9 0.0 1.7e-34 118.3 0.0 1.3 1 0 0 1 1 1 1 XPG N-terminal domain XPG_I PF00867.18 RKO93681.1 - 6.3e-29 100.2 1.0 7.3e-29 100.0 0.0 1.6 2 0 0 2 2 2 1 XPG I-region 5_3_exonuc PF01367.20 RKO93681.1 - 1.7e-05 25.3 0.0 3.8e-05 24.2 0.0 1.6 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold DUF1771 PF08590.10 RKO93681.1 - 0.015 15.6 1.2 0.039 14.3 1.2 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1771) HHH_5 PF14520.6 RKO93681.1 - 0.025 15.2 0.0 0.069 13.8 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix domain Ribosomal_L22 PF00237.19 RKO93685.1 - 0.033 14.4 0.0 0.058 13.6 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L22p/L17e IGFBP PF00219.18 RKO93686.1 - 7.2e-06 26.6 20.9 0.024 15.3 1.5 5.1 4 1 1 5 5 5 4 Insulin-like growth factor binding protein DUF1430 PF07242.11 RKO93687.1 - 0.047 14.0 0.0 0.076 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) Kinesin PF00225.23 RKO93688.1 - 8.2e-08 31.5 0.0 1e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO93688.1 - 0.0053 16.7 0.0 0.0068 16.3 0.0 1.2 1 0 0 1 1 1 1 Microtubule binding Kelch_4 PF13418.6 RKO93689.1 - 1.8e-13 50.3 0.9 1.1e-08 35.0 0.2 3.6 3 0 0 3 3 3 2 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO93689.1 - 4.8e-09 35.7 1.4 4.6e-05 22.9 0.1 4.2 4 0 0 4 4 4 2 Kelch motif Kelch_5 PF13854.6 RKO93689.1 - 2.8e-07 30.4 2.5 0.0037 17.2 0.1 4.4 4 0 0 4 4 4 2 Kelch motif Kelch_6 PF13964.6 RKO93689.1 - 3.4e-07 30.3 4.8 0.00029 21.0 0.1 4.4 4 0 0 4 4 4 2 Kelch motif Kelch_3 PF13415.6 RKO93689.1 - 0.00016 21.8 11.9 0.065 13.5 0.0 4.4 4 0 0 4 4 4 2 Galactose oxidase, central domain Kelch_2 PF07646.15 RKO93689.1 - 0.0012 18.7 6.1 0.077 13.0 0.0 4.7 5 1 1 6 6 6 1 Kelch motif Integrase_H2C2 PF17921.1 RKO93691.1 - 2.3e-06 27.6 0.1 3.3e-06 27.1 0.1 1.2 1 0 0 1 1 1 1 Integrase zinc binding domain DUF5021 PF16424.5 RKO93697.1 - 0.036 13.9 0.0 0.044 13.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5021) DUF1629 PF07791.11 RKO93697.1 - 0.1 12.8 0.0 0.12 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1629) MAP65_ASE1 PF03999.12 RKO93699.1 - 3.2 6.3 4.8 3 6.5 4.8 1.1 1 0 0 1 1 1 0 Microtubule associated protein (MAP65/ASE1 family) Hpt PF01627.23 RKO93700.1 - 2e-07 31.1 0.0 2.5e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Hpt domain Hyaluronidase_1 PF07212.11 RKO93702.1 - 0.0048 16.2 0.1 0.2 10.9 0.1 2.3 2 0 0 2 2 2 2 Hyaluronidase protein (HylP) Pkinase PF00069.25 RKO93704.1 - 2.6e-69 233.6 0.0 3.1e-69 233.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO93704.1 - 9.7e-39 133.2 0.0 1.2e-38 132.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 RKO93704.1 - 2.4e-07 30.4 0.0 1.1e-05 25.0 0.0 2.4 2 1 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 RKO93704.1 - 0.0096 14.9 0.0 0.012 14.6 0.0 1.2 1 0 0 1 1 1 1 Haspin like kinase domain PH PF00169.29 RKO93704.1 - 0.021 15.3 0.0 0.045 14.3 0.0 1.6 1 0 0 1 1 1 0 PH domain DUF1725 PF08333.11 RKO93704.1 - 0.31 10.7 1.2 16 5.3 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1725) CAP_N PF01213.19 RKO93705.1 - 0.011 15.2 5.1 0.011 15.2 5.1 4.1 5 1 0 5 5 5 0 Adenylate cyclase associated (CAP) N terminal Ricin_B_lectin PF00652.22 RKO93707.1 - 0.0011 19.3 0.1 0.0032 17.7 0.0 1.7 2 0 0 2 2 2 1 Ricin-type beta-trefoil lectin domain NAD_binding_4 PF07993.12 RKO93708.1 - 8e-58 195.6 0.0 1.1e-57 195.2 0.0 1.1 1 0 0 1 1 1 1 Male sterility protein PP-binding PF00550.25 RKO93708.1 - 1.7e-16 60.3 0.0 3.2e-16 59.4 0.0 1.5 1 0 0 1 1 1 1 Phosphopantetheine attachment site Epimerase PF01370.21 RKO93708.1 - 2e-09 37.3 0.0 4.5e-09 36.1 0.0 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 RKO93708.1 - 4.5e-07 29.2 0.0 1.1e-06 27.9 0.0 1.5 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_10 PF13460.6 RKO93708.1 - 0.00075 19.4 0.0 0.3 11.0 0.0 2.2 2 0 0 2 2 2 2 NAD(P)H-binding GDP_Man_Dehyd PF16363.5 RKO93708.1 - 0.01 15.3 0.0 0.042 13.2 0.0 2.0 1 1 0 1 1 1 0 GDP-mannose 4,6 dehydratase NmrA PF05368.13 RKO93708.1 - 0.036 13.6 0.0 0.071 12.7 0.0 1.5 2 0 0 2 2 2 0 NmrA-like family AMP-binding PF00501.28 RKO93709.1 - 2.1e-60 204.5 0.0 2.6e-60 204.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme Condensation PF00668.20 RKO93709.1 - 2e-06 26.7 0.0 4.7e-05 22.3 0.0 2.3 1 1 0 1 1 1 1 Condensation domain AMP-binding_C PF13193.6 RKO93709.1 - 0.012 16.6 0.0 0.037 15.0 0.0 1.9 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain DUF900 PF05990.12 RKO93709.1 - 0.17 11.3 0.0 0.3 10.6 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF900) Mito_carr PF00153.27 RKO93710.1 - 8.9e-17 60.8 0.6 3.4e-07 30.1 0.0 3.9 3 1 0 3 3 3 3 Mitochondrial carrier protein TAFII55_N PF04658.13 RKO93711.1 - 1.4e-49 167.9 0.0 2.8e-49 166.9 0.0 1.5 1 0 0 1 1 1 1 TAFII55 protein conserved region BUD22 PF09073.10 RKO93711.1 - 0.0006 19.3 15.7 0.00075 19.0 15.7 1.1 1 0 0 1 1 1 1 BUD22 peroxidase PF00141.23 RKO93712.1 - 1.2e-14 54.5 0.0 2.2e-13 50.4 0.0 2.3 1 1 1 2 2 2 1 Peroxidase TGS PF02824.21 RKO93712.1 - 0.00043 20.3 32.7 62 3.7 0.1 12.2 13 0 0 13 13 13 0 TGS domain SnAC PF14619.6 RKO93712.1 - 0.39 11.3 6.0 3.4 8.3 0.5 3.3 3 0 0 3 3 3 0 Snf2-ATP coupling, chromatin remodelling complex F-box-like PF12937.7 RKO93717.1 - 2.4e-05 24.1 1.7 6.3e-05 22.8 1.7 1.8 1 0 0 1 1 1 1 F-box-like XRN1_DBM PF18245.1 RKO93718.1 - 0.091 12.7 0.4 0.091 12.7 0.4 2.1 2 0 0 2 2 2 0 5-3 exonuclease XRN1 DCP1-binding motif Ank_2 PF12796.7 RKO93719.1 - 4.4e-09 36.8 1.0 0.044 14.4 0.0 3.2 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO93719.1 - 2.4e-06 27.7 0.4 0.12 12.7 0.0 4.1 3 3 2 5 5 5 2 Ankyrin repeats (many copies) Ank_4 PF13637.6 RKO93719.1 - 2.7e-06 27.8 1.0 0.036 14.7 0.0 4.0 2 2 3 5 5 5 4 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO93719.1 - 0.015 15.8 0.0 34 5.5 0.0 3.7 4 0 0 4 4 4 0 Ankyrin repeat APP_Cu_bd PF12924.7 RKO93719.1 - 0.22 12.3 3.0 29 5.5 0.3 3.9 4 0 0 4 4 4 0 Copper-binding of amyloid precursor, CuBD Elong_Iki1 PF10483.9 RKO93720.1 - 2.3e-28 99.6 0.0 1.4e-27 97.0 0.0 2.1 1 1 0 1 1 1 1 Elongator subunit Iki1 Kelch_4 PF13418.6 RKO93721.1 - 6.6e-24 83.7 18.6 2.5e-09 37.0 1.0 5.4 4 1 0 4 4 4 4 Galactose oxidase, central domain Kelch_1 PF01344.25 RKO93721.1 - 3.3e-18 65.0 7.6 1.8e-07 30.6 0.4 4.8 4 0 0 4 4 4 4 Kelch motif Kelch_3 PF13415.6 RKO93721.1 - 1e-15 57.6 21.0 1.1e-08 35.1 0.3 6.1 5 1 1 6 6 6 4 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO93721.1 - 1.4e-15 56.9 11.0 1.2e-06 28.6 0.4 4.8 4 0 0 4 4 4 4 Kelch motif Kelch_5 PF13854.6 RKO93721.1 - 4.7e-12 45.6 7.8 0.00012 22.0 0.1 6.0 6 0 0 6 6 6 4 Kelch motif Kelch_2 PF07646.15 RKO93721.1 - 1.7e-10 40.4 7.5 4.9e-05 23.1 0.5 4.6 4 0 0 4 4 4 2 Kelch motif CwfJ_C_1 PF04677.15 RKO93722.1 - 0.027 14.3 0.0 6.2 6.7 0.0 2.2 2 0 0 2 2 2 0 Protein similar to CwfJ C-terminus 1 CTV_P33 PF07184.11 RKO93722.1 - 0.25 10.3 0.4 7.2 5.6 0.0 2.2 2 0 0 2 2 2 0 Citrus tristeza virus P33 protein SKG6 PF08693.10 RKO93723.1 - 0.00012 21.4 0.9 0.00012 21.4 0.9 2.4 2 0 0 2 2 2 1 Transmembrane alpha-helix domain Mid2 PF04478.12 RKO93723.1 - 0.0039 17.0 0.0 0.0086 15.9 0.0 1.5 1 0 0 1 1 1 1 Mid2 like cell wall stress sensor TMEM154 PF15102.6 RKO93723.1 - 0.062 13.2 0.1 0.12 12.3 0.1 1.5 1 0 0 1 1 1 0 TMEM154 protein family Beta-APP PF03494.13 RKO93723.1 - 0.15 11.9 2.3 0.41 10.5 2.3 1.7 1 0 0 1 1 1 0 Beta-amyloid peptide (beta-APP) PRIMA1 PF16101.5 RKO93723.1 - 0.23 11.5 0.1 0.23 11.5 0.1 2.6 2 1 0 2 2 2 0 Proline-rich membrane anchor 1 MGC-24 PF05283.11 RKO93723.1 - 6.7 7.2 12.6 13 6.2 12.2 1.7 1 1 0 1 1 1 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin DUF4630 PF15443.6 RKO93726.1 - 0.064 13.4 0.2 0.1 12.8 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4630) RasGEF PF00617.19 RKO93727.1 - 1.6e-40 139.1 3.3 2e-40 138.9 3.3 1.1 1 0 0 1 1 1 1 RasGEF domain zf-RING_2 PF13639.6 RKO93732.1 - 8.3e-13 48.5 2.9 1e-12 48.2 2.9 1.1 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 RKO93732.1 - 6.5e-10 38.7 2.0 8.5e-10 38.3 2.0 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO93732.1 - 9.2e-10 38.2 1.1 1.2e-09 37.9 1.1 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 RKO93732.1 - 1.3e-09 38.2 1.7 1.7e-09 37.8 1.7 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 RKO93732.1 - 6.5e-09 35.4 2.8 7e-09 35.3 0.7 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-RING_UBOX PF13445.6 RKO93732.1 - 1.3e-08 34.7 1.1 8.1e-08 32.2 0.5 1.9 1 1 1 2 2 2 1 RING-type zinc-finger Prok-RING_4 PF14447.6 RKO93732.1 - 2.2e-08 33.8 1.2 2.8e-08 33.5 1.2 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 RKO93732.1 - 1e-07 31.8 0.9 1.2e-07 31.5 0.9 1.1 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 RKO93732.1 - 2.5e-06 27.4 0.4 2.9e-06 27.2 0.4 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_3 PF13920.6 RKO93732.1 - 2.9e-05 23.9 0.8 3.4e-05 23.6 0.8 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 RKO93732.1 - 0.00029 20.4 0.9 0.00037 20.1 0.9 1.3 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4_4 PF15227.6 RKO93732.1 - 0.00034 20.7 1.7 0.00064 19.8 1.7 1.5 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 RKO93732.1 - 0.0011 18.8 0.4 0.0013 18.5 0.4 1.2 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain RINGv PF12906.7 RKO93732.1 - 0.0011 19.0 2.4 0.0017 18.4 2.4 1.4 1 1 0 1 1 1 1 RING-variant domain Prok-RING_1 PF14446.6 RKO93732.1 - 0.0012 18.7 1.2 0.24 11.3 0.1 2.1 2 0 0 2 2 2 2 Prokaryotic RING finger family 1 FANCL_C PF11793.8 RKO93732.1 - 0.0071 16.5 2.8 0.16 12.1 2.8 2.1 1 1 0 1 1 1 1 FANCL C-terminal domain zf-Nse PF11789.8 RKO93732.1 - 0.0076 16.1 0.5 0.021 14.7 0.5 1.7 1 1 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit Rad50_zn_hook PF04423.14 RKO93732.1 - 0.014 15.2 0.9 0.04 13.7 0.1 1.9 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-C3H2C3 PF17122.5 RKO93732.1 - 0.019 15.0 3.2 0.068 13.2 3.2 1.8 1 1 0 1 1 1 0 Zinc-finger zf-RING_9 PF13901.6 RKO93732.1 - 0.02 14.9 0.8 0.023 14.7 0.8 1.1 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon PHD PF00628.29 RKO93732.1 - 0.038 13.9 1.6 0.09 12.7 1.6 1.6 1 1 0 1 1 1 0 PHD-finger U-box PF04564.15 RKO93732.1 - 0.046 13.9 0.0 0.055 13.7 0.0 1.1 1 0 0 1 1 1 0 U-box domain zf-RING-like PF08746.11 RKO93732.1 - 0.062 13.6 0.5 0.089 13.1 0.5 1.2 1 0 0 1 1 1 0 RING-like domain zf-C2H2_4 PF13894.6 RKO93732.1 - 0.14 13.1 0.4 0.14 13.1 0.4 2.1 2 1 0 2 2 2 0 C2H2-type zinc finger SCNM1_acidic PF15805.5 RKO93735.1 - 0.059 13.1 0.1 0.13 12.0 0.1 1.6 1 0 0 1 1 1 0 Acidic C-terminal region of sodium channel modifier 1 SCNM1 FadA PF09403.10 RKO93735.1 - 0.15 12.5 5.8 0.1 13.1 2.2 2.3 2 1 0 2 2 2 0 Adhesion protein FadA DUF4431 PF14485.6 RKO93736.1 - 0.0055 16.5 0.1 6.8 6.6 0.0 3.3 3 0 0 3 3 3 2 Domain of unknown function (DUF4431) AAA_16 PF13191.6 RKO93736.1 - 2.9 8.3 6.8 6.9 7.0 0.6 3.3 3 0 0 3 3 3 0 AAA ATPase domain CENP-T_C PF15511.6 RKO93738.1 - 0.1 12.7 0.0 0.59 10.3 0.0 2.0 2 0 0 2 2 2 0 Centromere kinetochore component CENP-T histone fold DUF4219 PF13961.6 RKO93738.1 - 0.26 11.0 4.5 8 6.3 0.8 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4219) SGT1 PF07093.11 RKO93739.1 - 0.00029 19.4 0.0 0.00038 19.1 0.0 1.1 1 0 0 1 1 1 1 SGT1 protein Nipped-B_C PF12830.7 RKO93743.1 - 1.4e-32 113.2 0.0 1.6e-31 109.7 0.0 2.8 3 0 0 3 3 3 1 Sister chromatid cohesion C-terminus Cohesin_HEAT PF12765.7 RKO93743.1 - 3.1e-11 43.3 5.7 5.3e-11 42.6 2.2 3.3 3 0 0 3 3 3 1 HEAT repeat associated with sister chromatid cohesion HEAT PF02985.22 RKO93743.1 - 3.9e-05 23.5 5.7 3.1 8.3 0.1 6.7 6 0 0 6 6 6 2 HEAT repeat HEAT_EZ PF13513.6 RKO93743.1 - 0.14 12.7 9.0 13 6.4 0.0 5.7 6 0 0 6 6 6 0 HEAT-like repeat DUF3176 PF11374.8 RKO93744.1 - 0.0017 18.5 0.8 0.0017 18.5 0.8 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF3176) NMT1 PF09084.11 RKO93745.1 - 8e-19 68.4 0.0 1.4e-18 67.6 0.0 1.4 1 0 0 1 1 1 1 NMT1/THI5 like Ephrin_rec_like PF07699.13 RKO93745.1 - 0.00044 19.9 5.9 0.0089 15.8 1.9 2.5 1 1 1 2 2 2 2 Putative ephrin-receptor like NCD3G PF07562.14 RKO93745.1 - 0.13 12.2 1.5 0.9 9.6 0.2 2.3 1 1 2 3 3 2 0 Nine Cysteines Domain of family 3 GPCR Exo_endo_phos PF03372.23 RKO93746.1 - 7.7e-05 22.3 0.1 9.2e-05 22.1 0.1 1.0 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family TPR_14 PF13428.6 RKO93747.1 - 0.0025 18.5 2.1 0.0025 18.5 2.1 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 RKO93747.1 - 0.0063 16.5 0.1 0.0063 16.5 0.1 2.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 RKO93747.1 - 0.0075 16.9 6.6 0.0075 16.9 6.6 3.3 3 1 0 3 3 3 1 Tetratricopeptide repeat RNA_pol_Rpb1_R PF05001.13 RKO93747.1 - 0.18 12.2 3.3 0.66 10.4 3.3 2.1 1 0 0 1 1 1 0 RNA polymerase Rpb1 C-terminal repeat BTAD PF03704.17 RKO93747.1 - 1.7 9.1 9.2 0.082 13.3 1.8 2.6 2 1 1 3 3 3 0 Bacterial transcriptional activator domain TRAP-gamma PF07074.12 RKO93749.1 - 0.0025 17.4 5.1 0.1 12.1 5.1 2.0 1 1 0 1 1 1 1 Translocon-associated protein, gamma subunit (TRAP-gamma) VirB3 PF05101.13 RKO93749.1 - 5.3 7.3 8.1 0.61 10.4 0.4 2.4 2 1 0 2 2 2 0 Type IV secretory pathway, VirB3-like protein Glyco_transf_41 PF13844.6 RKO93756.1 - 4.1e-90 302.5 0.1 2.8e-49 167.8 0.0 3.7 3 1 0 4 4 4 3 Glycosyl transferase family 41 W2 PF02020.18 RKO93757.1 - 4.6e-21 74.8 0.2 4.6e-21 74.8 0.2 1.5 1 1 1 2 2 2 1 eIF4-gamma/eIF5/eIF2-epsilon Microcephalin PF12258.8 RKO93758.1 - 0.034 13.4 2.0 0.37 10.0 0.2 2.0 2 0 0 2 2 2 0 Microcephalin protein Peptidase_S8 PF00082.22 RKO93759.1 - 2.4e-30 105.8 0.8 3.3e-30 105.4 0.8 1.2 1 0 0 1 1 1 1 Subtilase family DUF3395 PF11875.8 RKO93760.1 - 0.29 11.0 3.7 0.59 10.0 3.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3395) ISG65-75 PF11727.8 RKO93760.1 - 3.1 6.9 11.8 5.3 6.2 11.8 1.3 1 0 0 1 1 1 0 Invariant surface glycoprotein PA-IL PF07828.12 RKO93762.1 - 0.077 13.0 0.0 0.28 11.2 0.0 1.9 3 0 0 3 3 3 0 PA-IL-like protein Peripla_BP_6 PF13458.6 RKO93763.1 - 8.7e-25 88.1 0.0 7.7e-24 85.0 0.0 2.2 2 0 0 2 2 2 1 Periplasmic binding protein DUF4578 PF15147.6 RKO93765.1 - 8.1 7.3 10.8 0.36 11.7 0.7 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4578) PH_9 PF15410.6 RKO93768.1 - 0.16 12.3 0.0 0.34 11.3 0.0 1.5 1 0 0 1 1 1 0 Pleckstrin homology domain Pex14_N PF04695.13 RKO93769.1 - 0.036 14.7 0.6 0.036 14.7 0.6 2.6 4 0 0 4 4 4 0 Peroxisomal membrane anchor protein (Pex14p) conserved region APG6 PF04111.12 RKO93770.1 - 1.3e-58 197.9 0.0 2.2e-58 197.1 0.0 1.3 1 0 0 1 1 1 1 Apg6 BARA domain APG6_N PF17675.1 RKO93770.1 - 3.3e-25 89.2 21.4 4.9e-25 88.6 21.4 1.3 1 0 0 1 1 1 1 Apg6 coiled-coil region Atg14 PF10186.9 RKO93770.1 - 0.00021 20.5 1.4 0.00027 20.1 1.4 1.1 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 BH3 PF15285.6 RKO93770.1 - 0.0011 18.6 0.2 0.0019 17.9 0.2 1.4 1 0 0 1 1 1 1 Beclin-1 BH3 domain, Bcl-2-interacting DUF1664 PF07889.12 RKO93770.1 - 0.22 11.6 6.3 0.18 11.8 4.8 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) ThiF PF00899.21 RKO93771.1 - 3.7e-110 367.1 0.0 8.4e-73 244.7 0.0 2.1 2 0 0 2 2 2 2 ThiF family UBA_e1_thiolCys PF10585.9 RKO93771.1 - 9.7e-96 320.5 0.1 1.7e-95 319.8 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin-activating enzyme active site E1_UFD PF09358.10 RKO93771.1 - 2.3e-33 114.7 0.0 5e-33 113.7 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin fold domain E1_FCCH PF16190.5 RKO93771.1 - 4.5e-32 110.1 0.3 9.5e-32 109.0 0.3 1.6 1 0 0 1 1 1 1 Ubiquitin-activating enzyme E1 FCCH domain E1_4HB PF16191.5 RKO93771.1 - 5.8e-25 87.3 0.1 1.3e-24 86.1 0.1 1.7 1 0 0 1 1 1 1 Ubiquitin-activating enzyme E1 four-helix bundle Tap-RNA_bind PF09162.10 RKO93771.1 - 0.096 12.5 0.0 0.29 11.0 0.0 1.9 1 0 0 1 1 1 0 Tap, RNA-binding zf-Tim10_DDP PF02953.15 RKO93772.1 - 6.3e-08 32.2 0.2 7e-08 32.0 0.2 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Bromodomain PF00439.25 RKO93773.1 - 1.7e-20 72.9 0.1 1.8e-20 72.8 0.1 1.0 1 0 0 1 1 1 1 Bromodomain WD40 PF00400.32 RKO93774.1 - 1e-14 54.7 4.1 5.6e-05 23.8 0.6 4.5 4 0 0 4 4 4 3 WD domain, G-beta repeat WD40_like PF17005.5 RKO93774.1 - 0.026 13.9 0.0 0.088 12.1 0.0 1.8 1 1 1 2 2 2 0 WD40-like domain Nup160 PF11715.8 RKO93774.1 - 0.06 12.0 0.0 2 7.0 0.0 2.9 1 1 2 3 3 3 0 Nucleoporin Nup120/160 TIMELESS_C PF05029.13 RKO93774.1 - 0.78 8.8 10.1 1.1 8.3 10.1 1.1 1 0 0 1 1 1 0 Timeless protein C terminal region CDC45 PF02724.14 RKO93774.1 - 5.5 5.2 8.0 7.2 4.8 8.0 1.1 1 0 0 1 1 1 0 CDC45-like protein HSP20 PF00011.21 RKO93775.1 - 1.4e-06 28.4 0.1 2.3e-06 27.7 0.1 1.3 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 RKO93775.1 - 0.018 14.6 0.3 0.043 13.4 0.1 1.7 2 0 0 2 2 2 0 HSP20-like domain found in ArsA DUF5058 PF16481.5 RKO93775.1 - 0.23 11.1 0.5 0.58 9.8 0.5 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF5058) Peptidase_M64 PF09471.10 RKO93778.1 - 0.005 16.4 0.0 0.0062 16.1 0.0 1.1 1 0 0 1 1 1 1 IgA Peptidase M64 DnaJ PF00226.31 RKO93779.1 - 4.6e-09 36.3 0.1 1.1e-08 35.0 0.1 1.6 1 0 0 1 1 1 1 DnaJ domain SAM_1 PF00536.30 RKO93779.1 - 1.8e-05 25.1 0.0 4.2e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) zf-CCCH_3 PF15663.5 RKO93779.1 - 0.027 14.7 3.3 0.029 14.6 0.3 2.0 1 1 1 2 2 2 0 Zinc-finger containing family Med9 PF07544.13 RKO93779.1 - 0.033 14.3 0.2 0.39 10.8 0.1 2.6 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Sulf_coat_C PF12193.8 RKO93779.1 - 0.14 12.2 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 Sulfolobus virus coat protein C terminal NOB1_Zn_bind PF08772.11 RKO93779.1 - 0.15 12.3 0.2 0.15 12.3 0.2 1.8 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like DUF2408 PF10303.9 RKO93779.1 - 1.1 9.9 3.4 15 6.1 0.0 3.1 4 0 0 4 4 4 0 Protein of unknown function (DUF2408) zf-CCCH_4 PF18044.1 RKO93779.1 - 2.1 8.2 15.0 0.62 9.9 2.5 2.8 3 0 0 3 3 3 0 CCCH-type zinc finger Phage_Mu_Gam PF07352.12 RKO93779.1 - 4 7.3 7.5 28 4.6 2.1 2.8 3 0 0 3 3 3 0 Bacteriophage Mu Gam like protein Peptidase_M64 PF09471.10 RKO93780.1 - 2.5e-25 89.5 0.0 4.3e-25 88.7 0.0 1.3 1 0 0 1 1 1 1 IgA Peptidase M64 PBP1_TM PF14812.6 RKO93780.1 - 1.3 9.4 10.6 6.6 7.2 0.7 2.8 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal LRR_8 PF13855.6 RKO93781.1 - 2.4e-13 49.6 23.0 2.1e-06 27.4 2.2 4.5 4 0 0 4 4 4 3 Leucine rich repeat LRR_4 PF12799.7 RKO93781.1 - 6.4e-09 36.0 31.5 0.019 15.4 4.3 5.9 4 1 1 5 5 5 5 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 RKO93781.1 - 0.0018 18.5 27.7 1.6 9.6 0.2 7.4 7 1 0 7 7 7 3 Leucine Rich Repeat MitoNEET_N PF10660.9 RKO93781.1 - 0.051 13.6 0.0 33 4.6 0.0 4.6 6 0 0 6 6 6 0 Iron-containing outer mitochondrial membrane protein N-terminus POTRA_3 PF17287.2 RKO93781.1 - 0.087 12.3 1.7 7.6 6.1 0.0 3.5 3 0 0 3 3 3 0 POTRA domain Herpes_ori_bp PF02399.15 RKO93782.1 - 1.1e-11 43.6 0.3 5e-11 41.4 0.0 2.0 2 0 0 2 2 2 1 Origin of replication binding protein PriCT_2 PF08707.11 RKO93782.1 - 9.9e-05 22.6 0.3 0.00027 21.3 0.0 1.9 2 0 0 2 2 2 1 Primase C terminal 2 (PriCT-2) TrbM PF07424.11 RKO93782.1 - 0.022 14.7 0.0 0.057 13.4 0.0 1.7 1 0 0 1 1 1 0 TrbM DUF244 PF03112.14 RKO93783.1 - 0.016 15.0 2.0 0.032 14.1 2.0 1.6 1 0 0 1 1 1 0 Uncharacterized protein family (ORF7) DUF FlaC_arch PF05377.11 RKO93783.1 - 0.025 15.0 1.8 5.7 7.4 0.2 2.8 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Ferritin-like PF12902.7 RKO93783.1 - 0.026 14.4 0.1 0.038 13.8 0.1 1.3 1 0 0 1 1 1 0 Ferritin-like DUF1664 PF07889.12 RKO93783.1 - 0.033 14.2 4.7 0.12 12.4 3.9 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) WASH_WAHD PF11945.8 RKO93783.1 - 0.065 12.8 4.4 0.067 12.7 3.3 1.6 1 1 0 1 1 1 0 WAHD domain of WASH complex SMC_Nse1 PF07574.13 RKO93783.1 - 0.084 12.8 4.4 0.91 9.4 4.3 2.2 1 1 0 1 1 1 0 Nse1 non-SMC component of SMC5-6 complex Laminin_II PF06009.12 RKO93783.1 - 0.095 12.7 4.0 0.045 13.8 1.6 1.7 2 0 0 2 2 2 0 Laminin Domain II DUF960 PF06124.11 RKO93783.1 - 0.12 13.0 2.3 0.63 10.7 0.0 2.6 2 1 0 2 2 2 0 Staphylococcal protein of unknown function (DUF960) TssO PF17561.2 RKO93783.1 - 0.32 11.1 6.2 0.48 10.5 2.8 2.2 1 1 1 2 2 2 0 Type VI secretion system, TssO CtIP_N PF10482.9 RKO93783.1 - 0.39 10.8 6.6 0.24 11.4 3.4 2.0 2 0 0 2 2 2 0 Tumour-suppressor protein CtIP N-terminal domain PRKG1_interact PF15898.5 RKO93783.1 - 1.6 9.7 5.2 12 6.9 5.2 2.3 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain tRNA-synt_1b PF00579.25 RKO93785.1 - 4e-21 75.6 0.0 2.4e-20 73.1 0.0 1.9 1 1 0 1 1 1 1 tRNA synthetases class I (W and Y) OPT PF03169.15 RKO93786.1 - 6.4e-26 91.2 20.4 2.5e-10 39.7 5.6 4.9 3 2 2 5 5 5 5 OPT oligopeptide transporter protein DUF3730 PF12530.8 RKO93787.1 - 2.4e-16 60.0 3.3 6.4e-15 55.3 0.4 3.2 4 0 0 4 4 4 2 Protein of unknown function (DUF3730) HEAT_2 PF13646.6 RKO93787.1 - 0.12 12.7 0.0 0.12 12.7 0.0 8.3 8 2 0 8 8 8 0 HEAT repeats HMGL-like PF00682.19 RKO93788.1 - 5.3e-80 268.8 0.4 7.6e-80 268.3 0.4 1.2 1 0 0 1 1 1 1 HMGL-like Phytoreo_S7 PF07236.11 RKO93789.1 - 0.28 9.5 0.0 0.4 9.0 0.0 1.1 1 0 0 1 1 1 0 Phytoreovirus S7 protein zf-C2H2 PF00096.26 RKO93790.1 - 0.13 12.8 2.0 0.26 11.8 2.0 1.5 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO93790.1 - 0.34 11.9 2.1 0.7 10.9 2.1 1.5 1 0 0 1 1 1 0 C2H2-type zinc finger NAD_binding_1 PF00175.21 RKO93791.1 - 2.7e-25 89.1 0.0 3.6e-25 88.7 0.0 1.2 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 RKO93791.1 - 1.1e-07 32.1 0.0 0.00018 21.7 0.0 2.2 2 0 0 2 2 2 2 Ferric reductase NAD binding domain FAD_binding_6 PF00970.24 RKO93791.1 - 1.6e-07 31.6 0.0 3.1e-07 30.7 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Phage_TAC_6 PF09550.10 RKO93791.1 - 0.0025 18.2 0.1 0.0042 17.5 0.1 1.3 1 0 0 1 1 1 1 Phage tail assembly chaperone protein, TAC DUF3666 PF12408.8 RKO93792.1 - 0.016 14.4 0.2 0.14 11.4 0.0 2.4 2 1 1 3 3 3 0 Ribose-5-phosphate isomerase DUF4383 PF14325.6 RKO93794.1 - 0.097 13.0 0.3 0.14 12.4 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4383) G-patch PF01585.23 RKO93796.1 - 1.9e-11 43.6 0.1 3e-11 43.0 0.1 1.3 1 0 0 1 1 1 1 G-patch domain G-patch_2 PF12656.7 RKO93796.1 - 0.00011 22.2 0.0 0.00018 21.5 0.0 1.4 1 0 0 1 1 1 1 G-patch domain FeoA PF04023.14 RKO93796.1 - 0.11 12.7 0.0 0.17 12.1 0.0 1.3 1 0 0 1 1 1 0 FeoA domain DUF3918 PF13056.6 RKO93797.1 - 0.072 12.7 0.1 0.12 12.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3918) zf-RING_4 PF14570.6 RKO93798.1 - 8.5e-22 76.7 12.8 2.1e-21 75.4 12.8 1.7 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-C3HC4_3 PF13920.6 RKO93798.1 - 4.5e-07 29.6 8.4 1e-06 28.5 8.4 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 RKO93798.1 - 6.2e-06 26.0 8.0 0.0018 18.1 5.8 2.6 2 0 0 2 2 2 2 Prokaryotic RING finger family 4 RRM_1 PF00076.22 RKO93798.1 - 7.9e-05 22.4 0.1 0.00075 19.3 0.1 2.3 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-RING_2 PF13639.6 RKO93798.1 - 8e-05 22.9 10.3 8e-05 22.9 10.3 1.9 2 1 0 2 2 2 1 Ring finger domain zf-UDP PF14569.6 RKO93798.1 - 0.00066 19.8 3.8 0.0016 18.5 3.8 1.7 1 0 0 1 1 1 1 Zinc-binding RING-finger SET_assoc PF11767.8 RKO93798.1 - 0.0019 17.8 0.0 0.0075 15.9 0.0 1.9 2 0 0 2 2 2 1 Histone lysine methyltransferase SET associated Baculo_IE-1 PF05290.11 RKO93798.1 - 0.012 15.5 6.9 0.012 15.5 6.9 1.7 2 0 0 2 2 2 0 Baculovirus immediate-early protein (IE-0) zf-C3HC4_2 PF13923.6 RKO93798.1 - 0.02 14.7 10.5 0.051 13.4 10.5 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO93798.1 - 0.031 14.1 11.2 0.079 12.8 11.2 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-Di19 PF05605.12 RKO93798.1 - 0.073 13.4 2.6 5.8 7.3 1.1 2.6 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding NPDC1 PF06809.11 RKO93798.1 - 0.15 11.1 0.7 0.19 10.7 0.7 1.1 1 0 0 1 1 1 0 Neural proliferation differentiation control-1 protein (NPDC1) zf-RING_UBOX PF13445.6 RKO93798.1 - 0.42 10.7 9.7 0.44 10.6 5.4 2.5 2 0 0 2 2 2 0 RING-type zinc-finger Rtf2 PF04641.12 RKO93798.1 - 0.44 9.9 5.9 0.72 9.2 5.9 1.4 1 1 0 1 1 1 0 Rtf2 RING-finger DUF1272 PF06906.11 RKO93798.1 - 1.1 9.5 8.1 27 4.9 8.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) FYVE_2 PF02318.16 RKO93798.1 - 2.2 8.5 9.2 0.11 12.7 3.7 1.7 2 0 0 2 2 2 0 FYVE-type zinc finger zf-C2H2 PF00096.26 RKO93801.1 - 9.4e-11 41.6 11.9 4e-06 27.0 2.3 2.6 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO93801.1 - 1e-08 35.2 9.1 0.00025 21.6 0.8 2.7 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO93801.1 - 1.5e-08 34.7 6.8 0.0005 20.4 0.5 3.5 3 0 0 3 3 3 3 Zinc-finger double domain zf-Di19 PF05605.12 RKO93801.1 - 0.0023 18.2 1.7 0.0039 17.5 1.7 1.4 1 0 0 1 1 1 1 Drought induced 19 protein (Di19), zinc-binding zf-met PF12874.7 RKO93801.1 - 0.0029 17.9 4.9 0.14 12.6 1.1 2.6 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-H2C2_5 PF13909.6 RKO93801.1 - 0.028 14.2 11.1 0.089 12.6 0.2 3.0 3 0 0 3 3 3 0 C2H2-type zinc-finger domain Zn_Tnp_IS1595 PF12760.7 RKO93801.1 - 0.034 14.1 2.6 0.034 14.1 2.6 1.7 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-C2H2_2 PF12756.7 RKO93801.1 - 0.082 13.3 3.5 5.3 7.4 0.5 2.2 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 RKO93801.1 - 0.14 12.4 7.4 0.75 10.2 1.9 2.4 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-C2H2_11 PF16622.5 RKO93801.1 - 0.15 11.8 6.7 1.1 9.1 0.5 2.5 2 0 0 2 2 2 0 zinc-finger C2H2-type Zn_ribbon_SprT PF17283.2 RKO93801.1 - 0.24 11.3 3.8 2.6 8.0 0.3 2.4 2 0 0 2 2 2 0 SprT-like zinc ribbon domain Nop PF01798.18 RKO93802.1 - 4.7e-89 297.8 0.0 9.2e-89 296.9 0.0 1.5 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin NOP5NT PF08156.13 RKO93802.1 - 1.4e-19 70.2 0.1 1.4e-19 70.2 0.1 2.3 2 0 0 2 2 2 1 NOP5NT (NUC127) domain RNA_polI_A34 PF08208.11 RKO93802.1 - 0.007 16.5 31.0 0.011 15.8 31.0 1.3 1 0 0 1 1 1 1 DNA-directed RNA polymerase I subunit RPA34.5 DUF3362 PF11842.8 RKO93802.1 - 0.35 11.2 6.9 0.66 10.3 6.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3362) DUF3408 PF11888.8 RKO93802.1 - 2 8.6 12.8 1.4e+02 2.6 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3408) RR_TM4-6 PF06459.12 RKO93802.1 - 5.8 6.7 17.9 9.1 6.0 17.9 1.3 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 Glycos_transf_2 PF00535.26 RKO93803.1 - 7.2e-24 84.5 0.0 8.4e-24 84.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 RKO93803.1 - 0.00061 19.7 0.0 0.00094 19.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 WHH PF14414.6 RKO93803.1 - 0.16 11.9 0.2 0.32 10.9 0.2 1.4 1 0 0 1 1 1 0 A nuclease of the HNH/ENDO VII superfamily with conserved WHH HIG_1_N PF04588.13 RKO93804.1 - 1.2e-09 38.3 1.7 1.8e-09 37.7 0.1 2.0 2 0 0 2 2 2 1 Hypoxia induced protein conserved region AAA_lid_3 PF17862.1 RKO93809.1 - 2.5e-06 27.2 0.4 3.2e-06 26.8 0.4 1.1 1 0 0 1 1 1 1 AAA+ lid domain zf-AN1 PF01428.16 RKO93812.1 - 4.9e-10 39.4 7.6 5.9e-10 39.2 7.6 1.1 1 0 0 1 1 1 1 AN1-like Zinc finger PocR PF10114.9 RKO93812.1 - 0.12 12.2 1.6 0.14 12.0 1.6 1.1 1 0 0 1 1 1 0 Sensory domain found in PocR ubiquitin PF00240.23 RKO93813.1 - 3.9e-18 65.0 0.0 4.4e-18 64.8 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin family Ubiquitin_4 PF18036.1 RKO93813.1 - 2.9e-05 24.0 0.0 0.066 13.3 0.0 2.0 2 0 0 2 2 2 2 Ubiquitin-like domain Rad60-SLD PF11976.8 RKO93813.1 - 0.00012 21.9 0.0 0.00013 21.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 RKO93813.1 - 0.05 14.1 0.0 0.1 13.1 0.0 1.5 1 1 0 1 1 1 0 Ubiquitin-like domain DNA_pol_B PF00136.21 RKO93814.1 - 3.9e-146 487.4 0.7 6.3e-146 486.7 0.7 1.3 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 RKO93814.1 - 4.8e-75 252.8 0.0 7.3e-75 252.2 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain zf-C4pol PF14260.6 RKO93814.1 - 1.4e-18 67.1 4.9 3.7e-18 65.8 4.9 1.8 1 0 0 1 1 1 1 C4-type zinc-finger of DNA polymerase delta DNA_pol_B_2 PF03175.13 RKO93814.1 - 0.0007 18.6 1.4 0.0089 14.9 0.2 2.2 2 0 0 2 2 2 1 DNA polymerase type B, organellar and viral DNA_pol_A_exo1 PF01612.20 RKO93814.1 - 0.055 13.2 0.1 0.12 12.1 0.1 1.6 1 0 0 1 1 1 0 3'-5' exonuclease DNA_pol_B_exo2 PF10108.9 RKO93814.1 - 0.13 12.0 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB C1_1 PF00130.22 RKO93814.1 - 0.96 9.4 4.5 4.6 7.2 4.5 2.1 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-RING-like PF08746.11 RKO93814.1 - 0.97 9.8 4.6 2.4 8.5 0.5 3.2 3 0 0 3 3 3 0 RING-like domain WW PF00397.26 RKO93815.1 - 1.3e-11 44.4 1.7 1.6e-10 40.9 0.6 2.4 2 0 0 2 2 2 1 WW domain CstA_5TM PF13722.6 RKO93815.1 - 0.0029 18.0 0.1 0.0061 16.9 0.1 1.5 1 0 0 1 1 1 1 5TM C-terminal transporter carbon starvation CstA GSIII_N PF12437.8 RKO93817.1 - 8.9e-66 220.5 0.1 1.4e-65 219.9 0.1 1.3 1 0 0 1 1 1 1 Glutamine synthetase type III N terminal Gln-synt_C-ter PF18318.1 RKO93817.1 - 1.8e-37 127.8 0.0 3.2e-37 127.0 0.0 1.5 1 0 0 1 1 1 1 Glutamine synthetase C-terminal domain Gln-synt_C PF00120.24 RKO93817.1 - 2.4e-20 72.9 0.0 5.3e-20 71.7 0.0 1.5 2 0 0 2 2 2 1 Glutamine synthetase, catalytic domain MFS_1 PF07690.16 RKO93818.1 - 6e-15 55.0 29.4 2.3e-14 53.1 29.4 1.9 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 RKO93818.1 - 8.9e-07 28.1 3.7 2e-06 27.0 3.7 1.5 1 0 0 1 1 1 1 Sugar (and other) transporter HEXIM PF15313.6 RKO93818.1 - 0.09 13.0 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Hexamethylene bis-acetamide-inducible protein DUF2178 PF09946.9 RKO93818.1 - 1.1 9.4 0.0 1.1 9.4 0.0 3.5 4 0 0 4 4 4 0 Predicted membrane protein (DUF2178) CBF PF03914.17 RKO93819.1 - 9e-51 172.3 2.7 3.4e-50 170.4 0.1 2.7 3 0 0 3 3 3 1 CBF/Mak21 family Cnd1 PF12717.7 RKO93819.1 - 0.051 13.6 1.4 0.07 13.2 0.3 1.7 2 0 0 2 2 2 0 non-SMC mitotic condensation complex subunit 1 Antimicrobial_7 PF08102.11 RKO93819.1 - 0.13 12.5 0.3 0.39 11.0 0.3 1.8 1 0 0 1 1 1 0 Scorpion antimicrobial peptide PPR_2 PF13041.6 RKO93820.1 - 2.1e-07 31.0 0.1 0.00023 21.3 0.0 4.1 5 0 0 5 5 5 1 PPR repeat family PPR_3 PF13812.6 RKO93820.1 - 0.00016 21.6 0.0 0.0033 17.4 0.0 3.0 3 0 0 3 3 3 1 Pentatricopeptide repeat domain PPR_long PF17177.4 RKO93820.1 - 0.0011 18.3 0.3 3.8 6.8 0.1 3.2 2 1 1 3 3 3 3 Pentacotripeptide-repeat region of PRORP F-box-like PF12937.7 RKO93821.1 - 1.9e-05 24.5 0.3 1.9e-05 24.5 0.3 2.2 2 1 1 3 3 3 1 F-box-like Asp PF00026.23 RKO93824.1 - 7.9e-46 156.9 6.2 9.4e-46 156.7 6.2 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 RKO93824.1 - 0.0011 18.7 0.0 0.0034 17.2 0.0 1.7 1 1 1 2 2 2 1 Xylanase inhibitor C-terminal Gas_vesicle_C PF01304.17 RKO93825.1 - 0.63 10.1 3.5 7.2 6.7 0.0 3.2 3 0 0 3 3 3 0 Gas vesicles protein GVPc repeated domain BTB_2 PF02214.22 RKO93828.1 - 4.3e-16 59.1 0.0 8.5e-16 58.1 0.0 1.5 1 0 0 1 1 1 1 BTB/POZ domain Peptidase_M3_N PF08439.10 RKO93828.1 - 0.024 14.9 0.9 3.6 7.9 1.3 2.4 2 0 0 2 2 2 0 Oligopeptidase F BLOC1_2 PF10046.9 RKO93828.1 - 0.19 12.0 2.8 0.49 10.7 0.8 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 WD40 PF00400.32 RKO93829.1 - 7.7e-27 93.0 12.7 5.9e-06 26.9 0.1 5.7 5 1 0 5 5 5 5 WD domain, G-beta repeat Ldr_toxin PF13940.6 RKO93830.1 - 0.38 10.8 2.8 0.86 9.7 2.8 1.6 1 0 0 1 1 1 0 Toxin Ldr, type I toxin-antitoxin system Ran_BP1 PF00638.18 RKO93831.1 - 0.017 15.4 0.0 0.027 14.7 0.0 1.2 1 0 0 1 1 1 0 RanBP1 domain HK PF02110.15 RKO93833.1 - 1.5e-71 240.6 5.6 3.1e-71 239.7 5.6 1.4 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family TMP-TENI PF02581.17 RKO93833.1 - 3.4e-60 202.5 0.9 6.5e-60 201.6 0.9 1.5 1 0 0 1 1 1 1 Thiamine monophosphate synthase Carb_kinase PF01256.17 RKO93833.1 - 0.0001 21.9 2.5 0.0001 21.9 2.5 1.8 2 1 0 2 2 2 1 Carbohydrate kinase Phos_pyr_kin PF08543.12 RKO93833.1 - 0.00058 19.3 1.4 0.0022 17.4 1.4 2.0 1 1 0 1 1 1 1 Phosphomethylpyrimidine kinase Zn_Tnp_IS91 PF14319.6 RKO93835.1 - 1.5 8.9 8.0 0.68 10.0 4.8 2.1 2 0 0 2 2 2 0 Transposase zinc-binding domain DnaJ_C PF01556.18 RKO93836.1 - 2.4e-06 27.7 0.0 3e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain PI31_Prot_C PF08577.11 RKO93839.1 - 9.9e-07 29.9 0.1 1.4e-06 29.4 0.1 1.3 1 0 0 1 1 1 1 PI31 proteasome regulator LRR_8 PF13855.6 RKO93841.1 - 4.4e-08 32.8 5.3 2e-05 24.3 0.7 2.6 1 1 1 2 2 2 2 Leucine rich repeat LRR_4 PF12799.7 RKO93841.1 - 9.2e-06 25.9 8.0 0.003 17.9 7.9 2.9 1 1 0 1 1 1 1 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 RKO93841.1 - 0.00073 19.7 2.5 0.067 13.8 0.2 3.1 2 1 0 2 2 2 1 Leucine Rich Repeat Adeno_E3_CR2 PF02439.15 RKO93841.1 - 0.053 13.3 4.5 0.11 12.3 4.5 1.5 1 0 0 1 1 1 0 Adenovirus E3 region protein CR2 LRR_6 PF13516.6 RKO93841.1 - 0.34 11.1 4.7 10 6.5 0.1 2.9 2 0 0 2 2 2 0 Leucine Rich repeat CUB PF00431.20 RKO93843.1 - 2.2e-08 34.4 0.2 3.1e-07 30.7 0.2 2.2 1 1 0 1 1 1 1 CUB domain EGF_2 PF07974.13 RKO93843.1 - 0.001 19.4 11.1 0.0026 18.1 11.1 1.7 1 0 0 1 1 1 1 EGF-like domain EB PF01683.18 RKO93843.1 - 0.0053 17.0 2.8 0.0053 17.0 2.8 1.7 2 0 0 2 2 2 1 EB module Dickkopf_N PF04706.12 RKO93843.1 - 0.036 14.5 2.7 0.042 14.3 1.4 1.8 2 0 0 2 2 2 0 Dickkopf N-terminal cysteine-rich region ACI44 PF15270.6 RKO93843.1 - 0.096 12.9 0.8 0.18 12.1 0.8 1.4 1 0 0 1 1 1 0 Metallo-carboxypeptidase inhibitor hEGF PF12661.7 RKO93843.1 - 0.2 12.3 9.5 0.24 12.1 7.5 2.2 2 0 0 2 2 2 0 Human growth factor-like EGF EGF_Tenascin PF18720.1 RKO93843.1 - 2.3 8.4 9.4 8 6.6 9.4 2.0 1 0 0 1 1 1 0 Tenascin EGF domain KCNQC3-Ank-G_bd PF11956.8 RKO93844.1 - 0.035 14.4 0.3 0.12 12.6 0.3 1.9 1 0 0 1 1 1 0 Ankyrin-G binding motif of KCNQ2-3 CAF-1_p60_C PF15512.6 RKO93846.1 - 0.017 15.6 0.7 0.037 14.5 0.7 1.4 1 0 0 1 1 1 0 Chromatin assembly factor complex 1 subunit p60, C-terminal TCTP PF00838.17 RKO93847.1 - 4e-68 229.0 2.4 4.3e-68 228.8 2.4 1.0 1 0 0 1 1 1 1 Translationally controlled tumour protein zf-rbx1 PF12678.7 RKO93849.1 - 7.3e-26 90.2 13.1 8.5e-26 90.0 13.1 1.1 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 RKO93849.1 - 4.5e-13 49.1 6.8 5.7e-13 48.7 6.8 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_2 PF13639.6 RKO93849.1 - 4.8e-07 30.0 15.0 2.7e-05 24.4 15.0 2.2 1 1 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 RKO93849.1 - 0.00021 21.1 11.9 0.0059 16.5 11.9 2.5 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 RKO93849.1 - 0.00061 19.6 15.1 0.083 12.7 15.1 2.4 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 RKO93849.1 - 0.027 14.3 11.5 0.11 12.3 4.8 2.6 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 RKO93849.1 - 0.056 13.2 15.6 7.6 6.4 15.6 2.5 1 1 0 1 1 1 0 RING-like zinc finger Zn_ribbon_17 PF17120.5 RKO93849.1 - 0.1 12.3 15.0 27 4.5 15.0 2.2 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 RKO93849.1 - 0.17 11.9 8.5 0.73 9.9 8.5 2.1 1 1 0 1 1 1 0 RING-type zinc-finger FANCL_C PF11793.8 RKO93849.1 - 0.41 10.9 10.6 1.5 9.1 10.6 1.8 1 1 0 1 1 1 0 FANCL C-terminal domain zf-RING-like PF08746.11 RKO93849.1 - 2.9 8.3 13.0 36 4.8 13.0 2.3 1 1 0 1 1 1 0 RING-like domain zf-RING_5 PF14634.6 RKO93849.1 - 3.6 7.6 13.6 54 3.9 13.6 2.6 1 1 0 1 1 1 0 zinc-RING finger domain zf-C3HC4_4 PF15227.6 RKO93849.1 - 3.8 7.7 10.2 0.36 11.0 0.8 2.5 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING Peptidase_M20 PF01546.28 RKO93851.1 - 7.7e-38 130.3 0.0 4.4e-34 118.0 0.0 2.1 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 RKO93851.1 - 5.8e-12 45.5 0.0 3e-08 33.6 0.0 2.9 2 1 0 2 2 2 2 Peptidase dimerisation domain Peptidase_M28 PF04389.17 RKO93851.1 - 0.00035 20.3 0.0 0.00067 19.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M28 Peptidase_M20 PF01546.28 RKO93852.1 - 3.5e-36 124.8 0.0 5.6e-36 124.2 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 RKO93852.1 - 1.9e-13 50.3 0.1 3.3e-13 49.5 0.1 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 RKO93852.1 - 0.0033 17.1 0.0 0.0064 16.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M28 Peptidase_M20 PF01546.28 RKO93853.1 - 3e-24 85.9 0.0 4.4e-24 85.3 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 RKO93853.1 - 4.3e-06 26.6 0.0 9.2e-06 25.5 0.0 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 RKO93853.1 - 0.13 11.9 0.0 0.21 11.2 0.0 1.3 1 0 0 1 1 1 0 Peptidase family M28 Peptidase_M20 PF01546.28 RKO93854.1 - 7.7e-38 130.3 0.0 4.4e-34 118.0 0.0 2.1 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 RKO93854.1 - 5.8e-12 45.5 0.0 3e-08 33.6 0.0 2.9 2 1 0 2 2 2 2 Peptidase dimerisation domain Peptidase_M28 PF04389.17 RKO93854.1 - 0.00035 20.3 0.0 0.00067 19.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M28 Peptidase_M20 PF01546.28 RKO93855.1 - 3.5e-36 124.8 0.0 5.6e-36 124.2 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 RKO93855.1 - 1.9e-13 50.3 0.1 3.3e-13 49.5 0.1 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 RKO93855.1 - 0.0033 17.1 0.0 0.0064 16.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M28 Cyclin PF08613.11 RKO93858.1 - 5.7e-07 30.0 0.1 8e-07 29.6 0.1 1.1 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 RKO93858.1 - 9.8e-05 22.1 0.0 0.00013 21.7 0.0 1.1 1 0 0 1 1 1 1 Cyclin, N-terminal domain Peptidase_M14 PF00246.24 RKO93859.1 - 2.8e-58 198.0 0.0 2e-47 162.4 0.0 2.1 1 1 1 2 2 2 2 Zinc carboxypeptidase PTPLA PF04387.14 RKO93860.1 - 5.9e-46 156.2 7.3 5.9e-46 156.2 7.3 1.5 2 0 0 2 2 2 1 Protein tyrosine phosphatase-like protein, PTPLA PTPLA PF04387.14 RKO93861.1 - 1.3e-36 125.8 5.3 2e-36 125.2 5.3 1.2 1 0 0 1 1 1 1 Protein tyrosine phosphatase-like protein, PTPLA ANAPC8 PF04049.13 RKO93862.1 - 7.6e-30 103.8 0.2 7.6e-30 103.8 0.2 2.0 2 0 0 2 2 2 1 Anaphase promoting complex subunit 8 / Cdc23 TPR_1 PF00515.28 RKO93862.1 - 1.5e-26 91.0 17.2 5.2e-06 26.1 0.4 6.5 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_8 PF13181.6 RKO93862.1 - 2.4e-23 80.3 11.0 7.3e-05 22.7 0.2 6.6 7 0 0 7 7 7 4 Tetratricopeptide repeat TPR_2 PF07719.17 RKO93862.1 - 2.6e-23 80.2 17.4 0.00037 20.4 0.4 7.4 6 1 1 7 7 7 5 Tetratricopeptide repeat TPR_16 PF13432.6 RKO93862.1 - 7.6e-13 48.9 10.2 2.9e-07 31.0 0.1 6.4 5 1 2 7 7 6 2 Tetratricopeptide repeat TPR_14 PF13428.6 RKO93862.1 - 7.8e-13 48.1 9.9 0.0016 19.1 0.1 7.4 6 2 2 8 8 8 3 Tetratricopeptide repeat TPR_11 PF13414.6 RKO93862.1 - 9.6e-13 47.6 1.2 3.1e-05 23.6 0.1 4.5 2 2 2 4 4 4 4 TPR repeat TPR_19 PF14559.6 RKO93862.1 - 1.3e-12 48.0 4.1 0.001 19.5 0.0 5.9 4 1 2 6 6 6 4 Tetratricopeptide repeat TPR_12 PF13424.6 RKO93862.1 - 5.1e-11 42.7 10.4 0.008 16.5 0.9 6.3 4 1 2 6 6 6 3 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO93862.1 - 1.3e-09 38.2 14.3 0.00031 20.9 3.2 4.8 3 1 1 5 5 5 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 RKO93862.1 - 3.1e-09 36.2 11.1 0.055 13.5 0.0 6.4 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_17 PF13431.6 RKO93862.1 - 2.3e-07 30.7 8.3 0.053 13.9 0.0 5.5 6 0 0 6 6 5 2 Tetratricopeptide repeat ChAPs PF09295.10 RKO93862.1 - 5.1e-07 29.0 0.2 0.0052 15.9 0.0 3.9 2 1 2 4 4 4 3 ChAPs (Chs5p-Arf1p-binding proteins) TPR_9 PF13371.6 RKO93862.1 - 0.00033 20.8 0.2 0.58 10.3 0.1 3.8 2 1 1 3 3 3 2 Tetratricopeptide repeat Mad3_BUB1_I_2 PF17014.5 RKO93862.1 - 0.00056 20.0 4.3 0.0092 16.1 2.9 3.1 2 1 1 3 3 3 1 Putative Mad3/BUB1 like region 1 protein TPR_15 PF13429.6 RKO93862.1 - 0.0009 18.5 0.0 0.0009 18.5 0.0 2.9 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO93862.1 - 0.023 15.3 13.1 17 6.3 0.1 6.4 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_10 PF13374.6 RKO93862.1 - 0.03 14.2 5.3 8.8 6.3 0.0 5.2 5 0 0 5 5 5 0 Tetratricopeptide repeat Ten1_2 PF15490.6 RKO93863.1 - 4.5e-30 103.8 0.0 5.1e-30 103.6 0.0 1.0 1 0 0 1 1 1 1 Telomere-capping, CST complex subunit Med13_C PF06333.12 RKO93866.1 - 2.6e-17 63.1 19.0 8.4e-17 61.4 8.0 4.7 2 1 0 2 2 2 1 Mediator complex subunit 13 C-terminal domain MID_MedPIWI PF18296.1 RKO93866.1 - 8e-05 22.5 0.0 8e-05 22.5 0.0 3.1 3 2 0 4 4 4 1 MID domain of medPIWI Glyco_hydro_26 PF02156.15 RKO93867.1 - 9.9e-08 31.8 1.1 1.9e-07 30.8 0.3 1.8 2 0 0 2 2 2 1 Glycosyl hydrolase family 26 EF-hand_5 PF13202.6 RKO93867.1 - 0.12 11.9 0.0 0.25 10.9 0.0 1.5 1 0 0 1 1 1 0 EF hand RRM_1 PF00076.22 RKO93868.1 - 5.7e-11 42.1 0.1 1.4e-10 40.8 0.1 1.7 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 RKO93868.1 - 0.00056 19.5 0.0 0.00067 19.2 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FAD_binding_3 PF01494.19 RKO93869.1 - 6.5e-18 65.1 1.5 8.1e-06 25.3 0.1 3.1 3 0 0 3 3 3 3 FAD binding domain NAD_binding_8 PF13450.6 RKO93869.1 - 0.00015 21.9 0.0 0.00053 20.2 0.0 2.0 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 RKO93869.1 - 0.0016 18.1 0.0 0.031 13.9 0.0 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 RKO93869.1 - 0.057 12.6 0.0 0.32 10.2 0.0 1.9 1 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 RKO93869.1 - 0.1 13.2 0.0 0.97 10.0 0.0 2.5 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase LRR_4 PF12799.7 RKO93872.1 - 4.3e-57 189.1 75.3 7.9e-07 29.3 0.8 16.9 10 5 10 20 20 20 17 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 RKO93872.1 - 8.5e-54 179.2 64.8 1e-13 50.8 4.5 11.8 8 3 5 14 14 14 12 Leucine rich repeat LRR_9 PF14580.6 RKO93872.1 - 4.1e-52 176.2 33.7 7.7e-15 54.8 1.6 8.7 4 3 4 8 8 8 8 Leucine-rich repeat LRR_5 PF13306.6 RKO93872.1 - 0.0001 22.3 13.3 3.1 7.8 0.1 5.2 4 1 0 4 4 4 4 BspA type Leucine rich repeat region (6 copies) LRR_6 PF13516.6 RKO93872.1 - 0.00078 19.3 38.9 14 6.0 0.0 15.8 18 0 0 18 18 18 2 Leucine Rich repeat PBP1_TM PF14812.6 RKO93873.1 - 0.31 11.5 3.5 0.52 10.7 3.5 1.3 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal RNA_pol_Rpb5_C PF01191.19 RKO93874.1 - 3.1e-26 91.1 0.1 3.7e-26 90.8 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain FapA PF03961.13 RKO93876.1 - 0.049 12.2 2.4 0.086 11.4 2.4 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A OHA PF14418.6 RKO93880.1 - 0.13 12.1 0.4 5.8 6.8 0.0 2.5 2 1 0 2 2 2 0 OST-HTH Associated domain APH PF01636.23 RKO93881.1 - 0.011 15.7 0.1 0.054 13.4 0.0 2.0 1 1 0 1 1 1 0 Phosphotransferase enzyme family Kdo PF06293.14 RKO93881.1 - 0.041 13.2 0.0 0.07 12.5 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 RKO93881.1 - 0.16 11.3 0.0 1.6 8.1 0.0 2.0 1 1 0 1 1 1 0 Protein kinase domain Fic PF02661.18 RKO93882.1 - 8.8e-13 49.0 0.0 1.5e-12 48.2 0.0 1.4 1 0 0 1 1 1 1 Fic/DOC family GET2 PF08690.10 RKO93883.1 - 0.021 14.5 0.2 0.027 14.2 0.2 1.1 1 0 0 1 1 1 0 GET complex subunit GET2 Otopetrin PF03189.13 RKO93883.1 - 0.08 11.7 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 Otopetrin MethyltransfD12 PF02086.15 RKO93887.1 - 1.7e-32 113.2 1.5 1.1e-23 84.2 0.9 2.0 1 1 1 2 2 2 2 D12 class N6 adenine-specific DNA methyltransferase Cons_hypoth95 PF03602.15 RKO93887.1 - 0.0018 17.9 0.1 0.0035 17.0 0.0 1.5 2 0 0 2 2 2 1 Conserved hypothetical protein 95 Ribonuc_red_lgC PF02867.15 RKO93888.1 - 1.3e-138 462.8 0.2 7.8e-86 288.7 1.6 2.2 1 1 1 2 2 2 2 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 RKO93888.1 - 8.1e-21 73.8 0.1 1.9e-20 72.6 0.1 1.7 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 RKO93888.1 - 1.3e-13 51.3 0.0 3.6e-13 49.9 0.0 1.8 1 0 0 1 1 1 1 ATP cone domain YpjP PF14005.6 RKO93889.1 - 0.014 15.5 2.3 1.1 9.3 0.1 2.3 2 0 0 2 2 2 0 YpjP-like protein EcsC PF12787.7 RKO93889.1 - 0.17 11.5 1.3 0.23 11.1 1.3 1.3 1 0 0 1 1 1 0 EcsC protein family ASH PF15780.5 RKO93893.1 - 1.6e-20 73.1 7.6 0.00063 19.9 0.4 9.4 9 0 0 9 9 9 5 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin DUF1573 PF07610.11 RKO93893.1 - 5.6e-06 26.3 0.1 0.98 9.5 0.0 5.8 5 0 0 5 5 5 1 Protein of unknown function (DUF1573) Motile_Sperm PF00635.26 RKO93893.1 - 0.065 13.1 0.6 27 4.7 0.0 3.9 4 0 0 4 4 4 0 MSP (Major sperm protein) domain MYCBPAP PF14646.6 RKO93893.1 - 0.077 11.9 0.1 1.2 8.0 0.0 3.0 4 0 0 4 4 4 0 MYCBP-associated protein family ASL_C2 PF14698.6 RKO93895.1 - 8.8e-17 61.6 0.1 1.1e-16 61.3 0.1 1.1 1 0 0 1 1 1 1 Argininosuccinate lyase C-terminal SET PF00856.28 RKO93896.1 - 3.2e-08 34.2 0.0 3.8e-08 33.9 0.0 1.1 1 0 0 1 1 1 1 SET domain GHMP_kinases_N PF00288.26 RKO93897.1 - 8.2e-07 29.2 0.0 2.8e-06 27.5 0.0 2.0 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 RKO93897.1 - 0.02 15.2 0.1 0.042 14.2 0.1 1.5 1 0 0 1 1 1 0 GHMP kinases C terminal SNF2_N PF00176.23 RKO93898.1 - 5.9e-50 169.9 0.0 8.9e-50 169.4 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain zf-C3HC4_2 PF13923.6 RKO93898.1 - 2.3e-09 36.9 10.0 2.3e-09 36.9 10.0 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 RKO93898.1 - 3.2e-08 33.8 11.0 3.2e-08 33.8 11.0 2.7 2 1 0 2 2 1 1 Ring finger domain zf-C3HC4 PF00097.25 RKO93898.1 - 7e-08 32.2 8.2 7e-08 32.2 8.2 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 RKO93898.1 - 7.2e-08 32.2 8.8 7.2e-08 32.2 8.8 2.8 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 RKO93898.1 - 8.6e-07 28.8 8.0 8.6e-07 28.8 8.0 2.3 3 0 0 3 3 3 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 RKO93898.1 - 7.3e-06 25.9 7.5 2.3e-05 24.3 7.5 1.9 1 0 0 1 1 1 1 RING-type zinc-finger Prok-RING_4 PF14447.6 RKO93898.1 - 5.1e-05 23.1 7.5 5.1e-05 23.1 7.5 1.9 2 0 0 2 2 1 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 RKO93898.1 - 0.0003 21.0 6.3 0.0003 21.0 6.3 2.4 2 0 0 2 2 1 1 RING-H2 zinc finger domain Helicase_C PF00271.31 RKO93898.1 - 0.00052 20.3 0.0 0.0012 19.1 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain TPR_8 PF13181.6 RKO93898.1 - 0.041 14.1 0.0 0.14 12.4 0.0 2.0 2 0 0 2 2 1 0 Tetratricopeptide repeat DUF3079 PF11278.8 RKO93898.1 - 0.092 12.6 1.7 0.23 11.3 1.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3079) zf-C3HC4_4 PF15227.6 RKO93898.1 - 0.11 12.6 11.5 0.033 14.3 8.0 2.0 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING zf-P11 PF03854.14 RKO93898.1 - 0.24 11.1 5.9 0.59 9.8 5.9 1.6 1 0 0 1 1 1 0 P-11 zinc finger zf-RING_6 PF14835.6 RKO93898.1 - 4.5 7.2 10.7 0.64 9.9 2.9 2.6 2 0 0 2 2 2 0 zf-RING of BARD1-type protein zf-RING_11 PF17123.5 RKO93898.1 - 7.6 6.4 12.4 3.4 7.5 8.6 2.4 2 0 0 2 2 2 0 RING-like zinc finger TRAPPC9-Trs120 PF08626.11 RKO93899.1 - 5.5e-111 371.9 0.0 1.2e-101 340.9 0.0 3.1 2 1 0 2 2 2 2 Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit TPR_12 PF13424.6 RKO93899.1 - 0.058 13.7 0.2 1 9.7 0.0 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat OrfB_Zn_ribbon PF07282.11 RKO93901.1 - 0.076 12.9 0.0 1.1 9.3 0.0 2.8 3 0 0 3 3 3 0 Putative transposase DNA-binding domain GATA PF00320.27 RKO93902.1 - 1.4e-16 59.8 3.2 1.7e-16 59.5 3.2 1.1 1 0 0 1 1 1 1 GATA zinc finger ArfGap PF01412.18 RKO93902.1 - 0.072 13.2 0.9 0.073 13.1 0.9 1.1 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf eIF-5_eIF-2B PF01873.17 RKO93902.1 - 0.3 11.0 2.3 0.37 10.7 2.3 1.1 1 0 0 1 1 1 0 Domain found in IF2B/IF5 Solute_trans_a PF03619.16 RKO93903.1 - 8.3e-66 222.2 14.4 4.9e-64 216.4 14.4 2.0 1 1 0 1 1 1 1 Organic solute transporter Ostalpha Plus-3 PF03126.18 RKO93904.1 - 9.3e-28 96.9 0.1 1.8e-27 96.0 0.1 1.5 1 0 0 1 1 1 1 Plus-3 domain Nuc_sug_transp PF04142.15 RKO93905.1 - 2.7e-114 381.6 14.0 3.1e-114 381.4 14.0 1.0 1 0 0 1 1 1 1 Nucleotide-sugar transporter EamA PF00892.20 RKO93905.1 - 2e-06 28.0 2.4 2e-06 28.0 2.4 2.4 2 1 0 2 2 2 1 EamA-like transporter family PUNUT PF16913.5 RKO93905.1 - 1.4e-05 24.5 3.7 1.4e-05 24.5 3.7 2.1 2 0 0 2 2 2 1 Purine nucleobase transmembrane transport UAA PF08449.11 RKO93905.1 - 2.7e-05 23.5 11.5 4.8e-05 22.7 11.5 1.4 1 0 0 1 1 1 1 UAA transporter family EmrE PF13536.6 RKO93905.1 - 0.00043 19.9 5.5 0.00077 19.1 5.5 1.4 1 1 0 1 1 1 1 Putative multidrug resistance efflux transporter TPT PF03151.16 RKO93905.1 - 0.002 17.6 1.0 0.002 17.6 1.0 2.2 1 1 1 2 2 2 2 Triose-phosphate Transporter family CRT-like PF08627.10 RKO93905.1 - 0.0066 15.4 3.1 0.0066 15.4 3.1 1.5 2 0 0 2 2 2 1 CRT-like, chloroquine-resistance transporter-like DDE_Tnp_4 PF13359.6 RKO93908.1 - 0.071 12.8 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 DDE superfamily endonuclease YdaS_antitoxin PF15943.5 RKO93908.1 - 0.21 11.5 0.5 0.51 10.2 0.2 1.7 2 0 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT zf-CCHC PF00098.23 RKO93909.1 - 0.065 13.3 2.3 0.27 11.4 1.7 2.3 2 0 0 2 2 2 0 Zinc knuckle D5_N PF08706.11 RKO93912.1 - 0.0052 17.1 0.0 0.014 15.6 0.0 1.8 1 0 0 1 1 1 1 D5 N terminal like SDA1 PF05285.12 RKO93913.1 - 2.6 7.4 12.1 5.9 6.2 12.1 1.6 1 1 0 1 1 1 0 SDA1 DUF1741 PF08427.10 RKO93917.1 - 3.7e-18 66.0 0.0 4.2e-18 65.9 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1741) gag-asp_proteas PF13975.6 RKO93918.1 - 0.007 16.9 0.0 0.012 16.2 0.0 1.3 1 0 0 1 1 1 1 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 RKO93918.1 - 0.02 15.5 0.0 0.036 14.7 0.0 1.4 1 0 0 1 1 1 0 Aspartyl protease Asp_protease PF09668.10 RKO93918.1 - 0.18 11.6 0.0 0.27 11.1 0.0 1.2 1 0 0 1 1 1 0 Aspartyl protease Pkinase_Tyr PF07714.17 RKO93921.1 - 4.9e-14 52.2 0.0 7.3e-14 51.7 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase PF00069.25 RKO93921.1 - 2.1e-11 43.7 0.0 2.9e-11 43.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain MRG PF05712.13 RKO93921.1 - 3.1e-06 26.6 0.0 5.3e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 MRG PHB_acc PF05233.13 RKO93921.1 - 0.02 14.9 0.4 0.04 14.0 0.4 1.4 1 0 0 1 1 1 0 PHB accumulation regulatory domain adh_short_C2 PF13561.6 RKO93922.1 - 5.5e-29 101.4 0.2 1.1e-24 87.4 0.0 2.0 1 1 1 2 2 2 2 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO93922.1 - 4.4e-20 72.0 0.0 3.5e-16 59.2 0.0 2.1 1 1 1 2 2 2 2 short chain dehydrogenase KR PF08659.10 RKO93922.1 - 0.062 13.2 0.0 5.5 6.9 0.0 2.1 2 0 0 2 2 2 0 KR domain adh_short_C2 PF13561.6 RKO93923.1 - 8.5e-56 189.1 1.1 9.8e-56 188.9 1.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 RKO93923.1 - 2.3e-46 157.7 0.4 2.7e-46 157.5 0.4 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 RKO93923.1 - 5.4e-09 36.2 0.2 7.8e-09 35.7 0.2 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 RKO93923.1 - 2.9e-05 23.6 0.2 0.00027 20.5 0.2 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family AdoHcyase_NAD PF00670.21 RKO93923.1 - 0.0055 16.8 1.7 0.013 15.6 1.7 1.7 1 1 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Enoyl_reductase PF12241.8 RKO93923.1 - 0.014 14.7 0.1 0.029 13.7 0.1 1.5 1 0 0 1 1 1 0 Trans-2-enoyl-CoA reductase catalytic region RmlD_sub_bind PF04321.17 RKO93923.1 - 0.028 13.5 0.3 0.071 12.2 0.1 1.7 2 0 0 2 2 2 0 RmlD substrate binding domain Glyco_trans_4_2 PF13477.6 RKO93923.1 - 0.032 14.3 0.0 0.058 13.4 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase 4-like THF_DHG_CYH_C PF02882.19 RKO93923.1 - 0.079 12.3 0.1 0.17 11.2 0.0 1.6 2 0 0 2 2 2 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 2C_adapt PF08793.10 RKO93925.1 - 0.0012 19.0 0.4 0.003 17.7 0.1 1.8 2 0 0 2 2 2 1 2-cysteine adaptor domain zf-C3H2C3 PF17122.5 RKO93925.1 - 0.16 12.0 3.9 0.36 10.9 3.9 1.6 1 0 0 1 1 1 0 Zinc-finger Prok-RING_1 PF14446.6 RKO93925.1 - 2.7 8.0 8.8 9.6 6.2 8.8 1.9 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 zf-RING_2 PF13639.6 RKO93925.1 - 5.8 7.3 8.4 11 6.4 8.4 1.5 1 0 0 1 1 1 0 Ring finger domain RNA_pol_L PF01193.24 RKO93929.1 - 0.014 14.8 0.0 0.04 13.3 0.0 1.7 1 1 0 1 1 1 0 RNA polymerase Rpb3/Rpb11 dimerisation domain TPPII PF12580.8 RKO93930.1 - 2.7e-33 115.1 0.0 6.9e-33 113.7 0.0 1.7 1 1 0 1 1 1 1 Tripeptidyl peptidase II MAGE_N PF12440.8 RKO93930.1 - 0.31 11.7 5.8 0.72 10.6 5.8 1.6 1 0 0 1 1 1 0 Melanoma associated antigen family N terminal AP3D1 PF06375.11 RKO93931.1 - 0.94 9.7 13.5 0.052 13.8 7.0 2.2 2 0 0 2 2 2 0 AP-3 complex subunit delta-1 TFIIF_alpha PF05793.12 RKO93931.1 - 2.4 6.7 19.8 0.0067 15.1 9.4 1.9 2 0 0 2 2 2 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) DUF913 PF06025.12 RKO93931.1 - 5.8 5.8 7.3 7.7 5.4 0.1 2.4 2 0 0 2 2 2 0 Domain of Unknown Function (DUF913) DUF1754 PF08555.10 RKO93931.1 - 9.3 7.1 20.7 13 6.7 14.3 2.8 2 0 0 2 2 2 0 Eukaryotic family of unknown function (DUF1754) Rap_GAP PF02145.15 RKO93932.1 - 1.1e-09 38.1 0.0 2e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 Rap/ran-GAP RPEL PF02755.15 RKO93933.1 - 1.3e-11 43.8 3.2 9.4e-08 31.5 0.4 3.1 2 1 1 3 3 3 2 RPEL repeat HECT PF00632.25 RKO93937.1 - 4.9e-89 298.8 0.0 6.7e-89 298.4 0.0 1.2 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) AAA_6 PF12774.7 RKO93938.1 - 4.5e-164 545.1 0.0 7.7e-160 531.2 0.0 3.2 3 0 0 3 3 3 2 Hydrolytic ATP binding site of dynein motor region DHC_N2 PF08393.13 RKO93938.1 - 1.9e-144 481.7 6.9 2.1e-144 481.5 4.5 2.4 2 0 0 2 2 2 1 Dynein heavy chain, N-terminal region 2 AAA_7 PF12775.7 RKO93938.1 - 2.2e-83 278.2 0.2 9.6e-78 259.8 0.0 3.5 3 0 0 3 3 3 3 P-loop containing dynein motor region Dynein_AAA_lid PF17852.1 RKO93938.1 - 1.2e-34 119.1 0.3 1.2e-33 116.0 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_8 PF12780.7 RKO93938.1 - 4.5e-26 91.7 4.2 8.7e-26 90.8 0.0 3.3 4 0 0 4 4 4 1 P-loop containing dynein motor region D4 AAA_5 PF07728.14 RKO93938.1 - 6e-20 71.6 0.0 6.2e-07 29.5 0.0 5.9 5 1 0 5 5 4 3 AAA domain (dynein-related subfamily) AAA_lid_1 PF17857.1 RKO93938.1 - 8e-19 67.7 0.1 3e-18 65.9 0.1 2.1 1 0 0 1 1 1 1 AAA+ lid domain AAA PF00004.29 RKO93938.1 - 5.3e-10 39.8 0.2 0.16 12.4 0.0 4.0 3 0 0 3 3 3 3 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 RKO93938.1 - 2e-08 34.8 2.3 0.39 11.1 0.0 5.6 5 0 0 5 5 5 2 AAA ATPase domain AAA_22 PF13401.6 RKO93938.1 - 7.3e-08 32.8 2.0 0.15 12.4 0.0 4.8 4 0 0 4 4 4 2 AAA domain AAA_18 PF13238.6 RKO93938.1 - 4.9e-07 30.4 0.2 0.16 12.6 0.0 4.3 3 0 0 3 3 3 2 AAA domain DUF853 PF05872.12 RKO93938.1 - 1.7e-06 26.9 3.2 0.19 10.3 0.0 3.2 3 0 0 3 3 3 3 Bacterial protein of unknown function (DUF853) RNA_helicase PF00910.22 RKO93938.1 - 5.6e-06 26.7 0.3 1.3 9.5 0.0 4.4 4 0 0 4 4 4 1 RNA helicase T2SSE PF00437.20 RKO93938.1 - 7.7e-05 21.9 0.7 0.025 13.7 0.0 3.4 3 0 0 3 3 3 1 Type II/IV secretion system protein AAA_19 PF13245.6 RKO93938.1 - 8.5e-05 22.9 0.8 1.3 9.4 0.0 4.4 4 0 0 4 4 4 1 AAA domain ResIII PF04851.15 RKO93938.1 - 0.00017 21.7 0.1 1.6 8.7 0.0 3.6 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit Sigma54_activat PF00158.26 RKO93938.1 - 0.00018 21.3 0.1 0.41 10.3 0.0 3.6 3 0 0 3 3 3 1 Sigma-54 interaction domain AAA_30 PF13604.6 RKO93938.1 - 0.00032 20.5 1.5 3.1 7.5 0.2 3.5 3 0 0 3 3 3 1 AAA domain Rad17 PF03215.15 RKO93938.1 - 0.0014 18.6 0.2 4.8 7.1 0.0 3.7 3 0 0 3 3 3 1 Rad17 P-loop domain FtsK_SpoIIIE PF01580.18 RKO93938.1 - 0.0021 17.5 1.4 0.79 9.0 0.0 3.7 4 0 0 4 4 4 1 FtsK/SpoIIIE family DEAD PF00270.29 RKO93938.1 - 0.0034 17.2 0.0 5.2 6.8 0.0 2.9 2 0 0 2 2 2 0 DEAD/DEAH box helicase ABC_tran PF00005.27 RKO93938.1 - 0.0046 17.5 0.1 0.58 10.7 0.0 3.1 2 0 0 2 2 2 1 ABC transporter IstB_IS21 PF01695.17 RKO93938.1 - 0.011 15.5 2.9 21 4.8 0.0 4.5 4 0 0 4 4 4 0 IstB-like ATP binding protein AAA_33 PF13671.6 RKO93938.1 - 0.021 15.0 0.4 11 6.2 0.0 4.1 4 0 0 4 4 3 0 AAA domain CENP-Q PF13094.6 RKO93938.1 - 0.021 15.0 0.0 0.057 13.6 0.0 1.7 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit AAA_25 PF13481.6 RKO93938.1 - 0.028 14.0 2.7 20 4.7 0.0 4.1 3 0 0 3 3 3 0 AAA domain Cytidylate_kin PF02224.18 RKO93938.1 - 0.029 14.1 0.3 8.7 6.0 0.1 2.8 2 0 0 2 2 2 0 Cytidylate kinase AAA_28 PF13521.6 RKO93938.1 - 0.044 14.0 0.3 44 4.3 0.0 3.7 3 0 0 3 3 3 0 AAA domain SRP54 PF00448.22 RKO93938.1 - 0.081 12.5 6.6 4 7.0 0.0 4.2 4 0 0 4 4 4 0 SRP54-type protein, GTPase domain AAA_11 PF13086.6 RKO93938.1 - 0.15 11.8 0.3 9.9 5.9 0.0 3.2 3 0 0 3 3 3 0 AAA domain TrwB_AAD_bind PF10412.9 RKO93938.1 - 0.16 10.8 2.4 8.7 5.1 0.1 3.2 3 0 0 3 3 3 0 Type IV secretion-system coupling protein DNA-binding domain NACHT PF05729.12 RKO93938.1 - 0.18 11.7 0.9 48 3.8 0.0 3.9 4 0 0 4 4 3 0 NACHT domain Mg_chelatase PF01078.21 RKO93938.1 - 0.18 11.1 5.7 1.5 8.2 0.0 3.7 4 0 0 4 4 4 0 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 RKO93938.1 - 0.26 11.0 1.3 18 5.1 0.0 3.5 4 0 0 4 4 3 0 Holliday junction DNA helicase RuvB P-loop domain TsaE PF02367.17 RKO93938.1 - 0.27 11.2 7.8 4.8 7.2 0.0 4.1 4 0 0 4 4 3 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SPACA9 PF15120.6 RKO93938.1 - 0.31 10.8 2.6 7.4 6.3 0.0 3.0 3 0 0 3 3 2 0 Sperm acrosome-associated protein 9 DUF87 PF01935.17 RKO93938.1 - 1.2 9.2 4.4 27 4.7 0.0 3.4 3 0 0 3 3 2 0 Helicase HerA, central domain Kelch_5 PF13854.6 RKO93939.1 - 0.0061 16.5 0.0 0.032 14.2 0.0 2.2 2 0 0 2 2 2 1 Kelch motif Kelch_6 PF13964.6 RKO93939.1 - 0.064 13.6 1.9 1.6 9.1 0.0 3.2 4 0 0 4 4 4 0 Kelch motif Zap1_zf2 PF18217.1 RKO93940.1 - 2.4 8.3 5.1 21 5.2 0.4 2.4 2 0 0 2 2 2 0 Zap1 zinc finger 2 IL11 PF07400.11 RKO93942.1 - 0.019 14.6 0.0 0.021 14.5 0.0 1.0 1 0 0 1 1 1 0 Interleukin 11 TBPIP PF07106.13 RKO93942.1 - 0.13 12.3 0.0 0.4 10.7 0.0 1.8 1 1 0 1 1 1 0 TBPIP/Hop2 winged helix domain Asp_protease_2 PF13650.6 RKO93943.1 - 0.0088 16.7 0.0 0.024 15.3 0.0 1.7 1 0 0 1 1 1 1 Aspartyl protease Peptidase_A2B PF12384.8 RKO93943.1 - 0.03 13.9 0.3 0.42 10.1 0.1 2.2 2 0 0 2 2 2 0 Ty3 transposon peptidase HATPase_c PF02518.26 RKO93945.1 - 1.5e-10 41.5 0.0 1.7e-10 41.4 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thoc2 PF11732.8 RKO93945.1 - 0.14 12.3 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Transcription- and export-related complex subunit NTF2 PF02136.20 RKO93948.1 - 9.4e-29 100.4 0.1 1.3e-28 100.0 0.1 1.2 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain DUF4518 PF15008.6 RKO93948.1 - 0.023 13.9 0.6 0.03 13.5 0.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4518) Herpes_BLLF1 PF05109.13 RKO93948.1 - 1.7 6.5 15.0 2.3 6.1 15.0 1.1 1 0 0 1 1 1 0 Herpes virus major outer envelope glycoprotein (BLLF1) DUF2457 PF10446.9 RKO93948.1 - 7.6 5.6 7.7 11 5.1 7.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) DEK_C PF08766.11 RKO93950.1 - 2.9e-06 27.1 0.7 6.3e-06 26.0 0.7 1.6 1 0 0 1 1 1 1 DEK C terminal domain TBCC PF07986.12 RKO93950.1 - 0.046 13.5 0.0 0.068 12.9 0.0 1.3 1 0 0 1 1 1 0 Tubulin binding cofactor C Hid1 PF12722.7 RKO93950.1 - 0.046 11.9 2.7 0.047 11.8 2.7 1.0 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein Nucleo_P87 PF07267.11 RKO93950.1 - 0.47 9.3 2.2 0.67 8.7 2.2 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 CDC45 PF02724.14 RKO93950.1 - 0.62 8.3 5.4 0.76 8.0 5.4 1.1 1 0 0 1 1 1 0 CDC45-like protein SARAF PF06682.12 RKO93951.1 - 8.9e-36 124.2 0.3 9.4e-36 124.1 0.3 1.0 1 0 0 1 1 1 1 SOCE-associated regulatory factor of calcium homoeostasis WD40 PF00400.32 RKO93953.1 - 4.7e-29 100.0 29.7 5.6e-06 27.0 0.4 7.3 7 0 0 7 7 7 7 WD domain, G-beta repeat NLE PF08154.12 RKO93953.1 - 7.2e-21 74.5 0.0 1.2e-20 73.8 0.0 1.4 1 0 0 1 1 1 1 NLE (NUC135) domain ANAPC4_WD40 PF12894.7 RKO93953.1 - 1.1e-05 25.7 2.7 0.26 11.6 0.2 4.4 2 2 2 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 RKO93953.1 - 0.0019 16.9 7.6 0.036 12.7 0.2 4.3 1 1 4 5 5 5 1 Nucleoporin Nup120/160 Ge1_WD40 PF16529.5 RKO93953.1 - 0.007 15.4 0.0 0.02 13.9 0.0 1.7 1 1 0 1 1 1 1 WD40 region of Ge1, enhancer of mRNA-decapping protein PQQ_3 PF13570.6 RKO93953.1 - 0.075 13.5 2.6 0.26 11.8 0.3 2.9 3 0 0 3 3 3 0 PQQ-like domain Pyridoxal_deC PF00282.19 RKO93954.1 - 9.3e-40 136.5 0.0 1.2e-39 136.1 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Beta_elim_lyase PF01212.21 RKO93954.1 - 0.0003 20.2 0.0 0.00037 19.9 0.0 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 RKO93954.1 - 0.02 14.1 0.0 0.039 13.1 0.0 1.4 1 0 0 1 1 1 0 Aminotransferase class I and II SepSecS PF05889.13 RKO93954.1 - 0.03 13.0 0.0 0.057 12.1 0.0 1.4 2 0 0 2 2 2 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS LRR_8 PF13855.6 RKO93957.1 - 2.6e-32 110.4 50.5 1.6e-10 40.6 5.8 6.3 2 1 5 7 7 7 6 Leucine rich repeat LRR_4 PF12799.7 RKO93957.1 - 3.2e-20 71.9 60.2 7e-07 29.5 1.1 7.8 3 2 4 8 8 8 8 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 RKO93957.1 - 2e-09 36.7 47.9 0.93 10.3 0.1 11.3 11 0 0 11 11 11 5 Leucine Rich Repeat AAA PF00004.29 RKO93958.1 - 1.5e-39 135.5 0.0 2.4e-39 134.8 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 RKO93958.1 - 2.3e-11 43.3 0.0 4.1e-11 42.5 0.0 1.4 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 RKO93958.1 - 8.5e-07 29.5 0.3 0.00012 22.5 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 RKO93958.1 - 3.9e-06 26.7 0.0 8e-06 25.7 0.0 1.6 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 RKO93958.1 - 8.8e-06 25.8 0.4 8.1e-05 22.6 0.4 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 RKO93958.1 - 1e-05 25.8 0.6 0.0059 16.9 0.1 2.8 1 1 2 3 3 3 1 AAA domain AAA_18 PF13238.6 RKO93958.1 - 2.3e-05 24.9 0.0 4.3e-05 24.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 RKO93958.1 - 3.1e-05 24.0 0.0 5.1e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain Bac_DnaA PF00308.18 RKO93958.1 - 4.3e-05 23.4 0.0 7e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial dnaA protein AAA_25 PF13481.6 RKO93958.1 - 5e-05 23.0 0.6 0.049 13.2 0.2 2.3 1 1 0 2 2 2 2 AAA domain AAA_33 PF13671.6 RKO93958.1 - 9.7e-05 22.6 0.0 0.00016 21.9 0.0 1.4 1 1 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 RKO93958.1 - 0.00034 21.0 0.0 0.00086 19.7 0.0 1.9 1 1 0 1 1 1 1 RNA helicase Mg_chelatase PF01078.21 RKO93958.1 - 0.00038 19.9 0.2 0.0013 18.2 0.2 1.7 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_2 PF07724.14 RKO93958.1 - 0.00042 20.5 0.0 0.00085 19.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) Rad17 PF03215.15 RKO93958.1 - 0.00067 19.6 0.4 0.0026 17.7 0.4 2.0 1 1 0 1 1 1 1 Rad17 P-loop domain AAA_28 PF13521.6 RKO93958.1 - 0.00082 19.7 0.0 0.0019 18.5 0.0 1.5 1 1 0 1 1 1 1 AAA domain TniB PF05621.11 RKO93958.1 - 0.00086 18.8 0.1 1.3 8.4 0.0 2.6 2 1 1 3 3 3 2 Bacterial TniB protein ATPase_2 PF01637.18 RKO93958.1 - 0.00087 19.3 0.3 0.074 13.0 0.0 2.2 1 1 1 2 2 2 1 ATPase domain predominantly from Archaea DUF815 PF05673.13 RKO93958.1 - 0.0016 17.7 0.0 0.0023 17.1 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) IstB_IS21 PF01695.17 RKO93958.1 - 0.002 17.9 0.0 0.0035 17.1 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein Guanylate_kin PF00625.21 RKO93958.1 - 0.0024 17.6 0.1 0.23 11.1 0.0 2.9 2 1 1 3 3 3 1 Guanylate kinase NACHT PF05729.12 RKO93958.1 - 0.0035 17.3 0.1 0.011 15.7 0.0 1.8 1 1 1 2 2 2 1 NACHT domain Sigma54_activ_2 PF14532.6 RKO93958.1 - 0.0043 17.2 0.0 0.0094 16.1 0.0 1.5 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_24 PF13479.6 RKO93958.1 - 0.005 16.6 0.1 0.01 15.6 0.1 1.5 1 1 0 1 1 1 1 AAA domain PhoH PF02562.16 RKO93958.1 - 0.01 15.3 0.0 0.016 14.7 0.0 1.2 1 0 0 1 1 1 0 PhoH-like protein TIP49 PF06068.13 RKO93958.1 - 0.01 15.0 0.0 0.017 14.3 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain Viral_helicase1 PF01443.18 RKO93958.1 - 0.011 15.5 0.0 0.016 14.9 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase KAP_NTPase PF07693.14 RKO93958.1 - 0.014 14.7 0.4 1.5 8.0 0.0 2.3 1 1 1 2 2 2 0 KAP family P-loop domain AAA_17 PF13207.6 RKO93958.1 - 0.014 15.8 0.0 0.03 14.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain Parvo_NS1 PF01057.17 RKO93958.1 - 0.017 14.3 0.0 0.025 13.7 0.0 1.2 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 TsaE PF02367.17 RKO93958.1 - 0.018 15.0 0.0 0.044 13.8 0.0 1.6 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 RKO93958.1 - 0.02 15.4 0.0 0.042 14.3 0.0 1.5 1 1 0 1 1 1 0 ABC transporter AAA_7 PF12775.7 RKO93958.1 - 0.021 14.4 0.0 0.054 13.0 0.0 1.7 1 1 0 1 1 1 0 P-loop containing dynein motor region Zeta_toxin PF06414.12 RKO93958.1 - 0.022 14.0 0.1 0.038 13.3 0.1 1.3 1 0 0 1 1 1 0 Zeta toxin ATPase PF06745.13 RKO93958.1 - 0.023 14.1 0.0 0.57 9.5 0.0 2.2 1 1 1 2 2 2 0 KaiC Sigma54_activat PF00158.26 RKO93958.1 - 0.038 13.7 0.0 0.089 12.5 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain CPT PF07931.12 RKO93958.1 - 0.075 12.9 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein SKI PF01202.22 RKO93958.1 - 0.08 13.1 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 Shikimate kinase AAA_3 PF07726.11 RKO93958.1 - 0.1 12.4 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IPT PF01745.16 RKO93958.1 - 0.16 11.3 0.0 0.37 10.2 0.0 1.5 1 0 0 1 1 1 0 Isopentenyl transferase AAA-ATPase_like PF09820.9 RKO93958.1 - 0.17 11.2 0.0 0.27 10.6 0.0 1.4 1 0 0 1 1 1 0 Predicted AAA-ATPase RT_RNaseH PF17917.1 RKO93959.1 - 5.6e-08 33.0 0.0 8.7e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase RT_RNaseH_2 PF17919.1 RKO93959.1 - 1.1e-05 25.3 0.0 2.5e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase CPP1-like PF11833.8 RKO93959.1 - 0.066 12.9 0.0 0.087 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like DUF2431 PF10354.9 RKO93962.1 - 1.1e-45 155.9 0.0 1.4e-45 155.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF2431) LRR_4 PF12799.7 RKO93963.1 - 2.6e-13 49.9 20.8 1e-07 32.1 2.5 2.8 1 1 2 3 3 3 3 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 RKO93963.1 - 1.5e-12 47.4 1.2 2.7e-12 46.5 1.2 1.4 1 1 0 1 1 1 1 Leucine-rich repeat LRR_8 PF13855.6 RKO93963.1 - 3.4e-11 42.7 17.4 3.4e-07 29.9 4.7 2.7 2 1 1 3 3 3 2 Leucine rich repeat LRR_1 PF00560.33 RKO93963.1 - 1 10.2 7.4 5.2 8.0 0.1 3.7 3 1 0 3 3 3 0 Leucine Rich Repeat LRR_6 PF13516.6 RKO93963.1 - 1.1 9.4 7.4 18 5.7 0.2 4.0 3 0 0 3 3 3 0 Leucine Rich repeat RT_RNaseH_2 PF17919.1 RKO93964.1 - 0.0002 21.4 0.0 0.00048 20.1 0.0 1.6 1 0 0 1 1 1 1 RNase H-like domain found in reverse transcriptase TDRP PF15683.5 RKO93964.1 - 0.0028 17.6 0.0 0.0043 17.0 0.0 1.3 1 0 0 1 1 1 1 Testis development-related protein RT_RNaseH PF17917.1 RKO93964.1 - 0.02 15.2 0.0 0.039 14.3 0.0 1.5 1 0 0 1 1 1 0 RNase H-like domain found in reverse transcriptase PhoLip_ATPase_C PF16212.5 RKO93968.1 - 1.4e-69 234.6 13.2 1.4e-69 234.6 13.2 1.8 2 0 0 2 2 2 1 Phospholipid-translocating P-type ATPase C-terminal Hydrolase PF00702.26 RKO93968.1 - 7.8e-11 42.7 0.0 7.7e-05 23.1 0.0 3.3 3 0 0 3 3 3 2 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 RKO93968.1 - 8.4e-11 41.8 0.0 2.4e-10 40.4 0.0 1.7 2 0 0 2 2 2 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 RKO93968.1 - 0.0042 16.9 0.1 0.013 15.3 0.1 1.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase PhoLip_ATPase_N PF16209.5 RKO93969.1 - 2.1e-24 85.0 3.1 3.9e-24 84.1 2.4 1.8 2 0 0 2 2 2 1 Phospholipid-translocating ATPase N-terminal E1-E2_ATPase PF00122.20 RKO93969.1 - 0.0016 18.0 0.0 0.0033 17.0 0.0 1.5 1 0 0 1 1 1 1 E1-E2 ATPase Thiolase_N PF00108.23 RKO93970.1 - 9.2e-74 248.1 0.0 1.5e-73 247.3 0.0 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 RKO93970.1 - 3.1e-48 162.5 0.2 6.7e-48 161.4 0.2 1.6 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 RKO93970.1 - 0.0016 18.1 0.9 0.0016 18.1 0.9 1.9 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain dUTPase PF00692.19 RKO93971.1 - 3.3e-48 162.6 0.0 3.7e-48 162.5 0.0 1.0 1 0 0 1 1 1 1 dUTPase dUTPase PF00692.19 RKO93972.1 - 4.8e-32 110.4 0.0 5.2e-32 110.2 0.0 1.0 1 0 0 1 1 1 1 dUTPase DUF3285 PF11688.8 RKO93974.1 - 0.2 11.6 0.1 0.33 10.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3285) DDE_3 PF13358.6 RKO93975.1 - 0.00022 21.0 0.0 0.00049 19.9 0.0 1.5 2 0 0 2 2 2 1 DDE superfamily endonuclease Guanylate_cyc PF00211.20 RKO93977.1 - 3.6e-29 101.7 0.0 5.2e-29 101.2 0.0 1.1 1 0 0 1 1 1 1 Adenylate and Guanylate cyclase catalytic domain TPR_2 PF07719.17 RKO93977.1 - 0.00024 21.0 0.0 0.00049 20.0 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat Copper-fist PF00649.18 RKO93985.1 - 1.1e-15 56.8 1.0 3.1e-15 55.4 1.0 1.8 1 0 0 1 1 1 1 Copper fist DNA binding domain WD40 PF00400.32 RKO93986.1 - 4.2e-27 93.9 9.4 5.6e-08 33.3 0.1 6.2 6 0 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO93986.1 - 3.1e-24 85.1 0.2 2.3e-06 27.8 0.0 6.1 1 1 5 6 6 6 6 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 RKO93986.1 - 1.8e-07 31.2 0.0 0.00078 19.4 0.1 3.3 1 1 2 3 3 3 3 Eukaryotic translation initiation factor eIF2A WD40_like PF17005.5 RKO93986.1 - 0.0056 16.0 0.0 0.041 13.2 0.0 2.3 2 2 1 3 3 3 1 WD40-like domain Nup160 PF11715.8 RKO93986.1 - 0.012 14.3 1.2 0.99 8.0 0.3 2.9 2 1 1 3 3 3 0 Nucleoporin Nup120/160 Frtz PF11768.8 RKO93986.1 - 0.21 9.8 0.0 0.53 8.5 0.0 1.6 2 0 0 2 2 2 0 WD repeat-containing and planar cell polarity effector protein Fritz RNA_pol_Rpb2_6 PF00562.28 RKO93987.1 - 1.7e-81 274.3 0.0 4.5e-81 272.9 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 RKO93987.1 - 2e-29 102.6 0.0 4.5e-29 101.4 0.0 1.5 1 1 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.16 RKO93987.1 - 2.4e-28 98.1 0.0 4.9e-28 97.1 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpa2_4 PF06883.12 RKO93987.1 - 4.7e-26 90.6 0.1 1.7e-25 88.8 0.0 2.1 2 0 0 2 2 2 1 RNA polymerase I, Rpa2 specific domain RNA_pol_Rpb2_2 PF04561.14 RKO93987.1 - 4.6e-22 78.6 0.0 7.5e-22 77.9 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 Polysacc_deac_1 PF01522.21 RKO93988.1 - 1.3e-24 86.4 0.1 1.4e-24 86.3 0.1 1.0 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 RKO93988.1 - 0.0012 18.1 0.0 0.0014 17.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 PCNA_N PF00705.18 RKO93989.1 - 4.4e-07 29.6 0.3 4.6e-07 29.6 0.3 1.0 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 RKO93990.1 - 2.5e-06 27.7 0.2 2.6e-06 27.6 0.2 1.0 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, C-terminal domain Chitin_synth_2 PF03142.15 RKO93991.1 - 4.8e-09 35.4 0.0 6.3e-09 35.0 0.0 1.2 1 0 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 RKO93991.1 - 0.0013 18.7 0.0 0.0015 18.5 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 RKO93991.1 - 0.0042 17.0 0.0 0.0043 17.0 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase like family 2 ATP-synt_B PF00430.18 RKO93992.1 - 0.21 11.6 1.8 0.41 10.7 1.8 1.6 1 1 0 1 1 1 0 ATP synthase B/B' CF(0) DNA_pol3_delta2 PF13177.6 RKO93994.1 - 0.029 14.2 0.0 0.042 13.6 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase III, delta subunit ATPase_2 PF01637.18 RKO93994.1 - 0.13 12.1 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea zf-C2H2 PF00096.26 RKO93995.1 - 2.9e-13 49.5 4.6 1.3e-05 25.3 2.2 2.1 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 RKO93995.1 - 1.1e-09 38.2 2.9 0.00068 20.3 1.1 2.1 2 0 0 2 2 2 2 C2H2-type zinc finger zf-H2C2_2 PF13465.6 RKO93995.1 - 1.4e-08 34.8 0.7 1.7e-07 31.3 0.1 2.4 2 0 0 2 2 2 1 Zinc-finger double domain zf-C2H2_jaz PF12171.8 RKO93995.1 - 8.2e-07 29.2 0.2 0.0018 18.5 0.0 2.1 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 RKO93995.1 - 5.6e-06 26.6 0.4 0.022 15.2 0.1 2.3 2 0 0 2 2 2 2 Zinc-finger of C2H2 type zf-C2H2_6 PF13912.6 RKO93995.1 - 8.5e-05 22.4 0.0 8.5e-05 22.4 0.0 2.1 2 1 0 2 2 2 1 C2H2-type zinc finger zf-C2H2_11 PF16622.5 RKO93995.1 - 0.0018 18.0 2.8 0.13 12.0 0.0 2.3 2 0 0 2 2 2 2 zinc-finger C2H2-type zf-MYST PF17772.1 RKO93995.1 - 0.0075 15.8 0.3 0.68 9.6 0.1 2.0 2 0 0 2 2 2 1 MYST family zinc finger domain zf-C2H2_2 PF12756.7 RKO93995.1 - 0.013 15.8 0.8 0.47 10.8 0.1 2.0 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf_C2H2_ZHX PF18387.1 RKO93995.1 - 0.017 14.7 0.6 0.12 12.1 0.0 2.0 2 0 0 2 2 2 0 Zinc-fingers and homeoboxes C2H2 finger domain zf-LYAR PF08790.11 RKO93995.1 - 0.021 14.7 1.5 0.7 9.9 0.1 2.1 2 0 0 2 2 2 0 LYAR-type C2HC zinc finger LIM PF00412.22 RKO93995.1 - 0.08 13.2 1.5 0.2 11.9 1.5 1.6 1 1 0 1 1 1 0 LIM domain RT_RNaseH_2 PF17919.1 RKO94001.1 - 0.0013 18.7 0.0 0.39 10.8 0.0 2.2 2 0 0 2 2 2 2 RNase H-like domain found in reverse transcriptase DUF2062 PF09835.9 RKO94001.1 - 0.068 13.0 0.1 0.093 12.6 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) DUF4203 PF13886.6 RKO94002.1 - 0.00082 19.1 3.1 0.0011 18.7 3.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4203) SNARE_assoc PF09335.11 RKO94002.1 - 0.017 15.6 3.1 0.033 14.7 3.1 1.5 1 0 0 1 1 1 0 SNARE associated Golgi protein Tetraspanin PF00335.20 RKO94002.1 - 0.33 10.6 3.6 0.75 9.5 3.6 1.6 1 1 0 1 1 1 0 Tetraspanin family ubiquitin PF00240.23 RKO94003.1 - 7.5e-35 118.5 0.5 9.4e-35 118.2 0.5 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 RKO94003.1 - 1.3e-16 60.2 0.6 1.7e-16 59.8 0.6 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ribosomal_L40e PF01020.17 RKO94003.1 - 1.1e-15 57.2 1.8 1.9e-15 56.5 1.8 1.4 1 0 0 1 1 1 1 Ribosomal L40e family Ubiquitin_2 PF14560.6 RKO94003.1 - 6.8e-06 26.5 0.2 2.5e-05 24.7 0.2 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_4 PF18036.1 RKO94003.1 - 0.003 17.6 1.3 0.63 10.1 0.1 2.1 2 0 0 2 2 2 2 Ubiquitin-like domain Ubiquitin_5 PF18037.1 RKO94003.1 - 0.0033 17.7 0.1 0.005 17.2 0.1 1.3 1 0 0 1 1 1 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 RKO94003.1 - 0.0055 16.8 0.0 0.0099 16.0 0.0 1.5 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like TBK1_ULD PF18396.1 RKO94003.1 - 0.0058 16.5 0.0 0.0077 16.1 0.0 1.3 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Sde2_N_Ubi PF13019.6 RKO94003.1 - 0.014 15.2 0.0 0.017 14.9 0.0 1.1 1 0 0 1 1 1 0 Silencing defective 2 N-terminal ubiquitin domain DUF2407 PF10302.9 RKO94003.1 - 0.05 14.2 0.1 0.057 14.0 0.1 1.2 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain IFT57 PF10498.9 RKO94004.1 - 0.00013 21.0 1.3 0.00013 21.0 1.3 2.5 1 1 1 2 2 2 1 Intra-flagellar transport protein 57 ApoLp-III PF07464.11 RKO94004.1 - 0.00028 21.0 8.5 0.2 11.8 0.1 3.4 2 1 1 3 3 3 2 Apolipophorin-III precursor (apoLp-III) CENP-K PF11802.8 RKO94004.1 - 0.00092 18.9 11.4 0.19 11.2 5.2 3.0 1 1 1 2 2 2 2 Centromere-associated protein K EzrA PF06160.12 RKO94004.1 - 0.0018 16.5 6.8 0.0018 16.5 6.8 2.7 1 1 0 2 2 2 1 Septation ring formation regulator, EzrA DUF3584 PF12128.8 RKO94004.1 - 0.0019 15.9 9.7 0.0096 13.5 9.4 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF3584) Spc7 PF08317.11 RKO94004.1 - 0.0021 17.0 5.5 0.0021 17.0 5.5 2.2 1 1 0 2 2 2 1 Spc7 kinetochore protein Fib_alpha PF08702.10 RKO94004.1 - 0.0025 18.0 19.1 0.013 15.6 4.3 3.3 1 1 2 3 3 3 1 Fibrinogen alpha/beta chain family DUF1664 PF07889.12 RKO94004.1 - 0.0042 17.1 14.1 0.32 11.0 0.5 4.3 2 1 3 5 5 5 1 Protein of unknown function (DUF1664) Apolipoprotein PF01442.18 RKO94004.1 - 0.0043 17.0 2.3 0.37 10.7 2.4 2.7 1 1 0 1 1 1 1 Apolipoprotein A1/A4/E domain Tropomyosin PF00261.20 RKO94004.1 - 0.0046 16.4 11.5 0.37 10.1 2.5 3.1 2 1 0 2 2 2 1 Tropomyosin Baculo_PEP_C PF04513.12 RKO94004.1 - 0.0088 16.1 18.8 0.35 10.9 2.0 3.7 1 1 2 3 3 3 2 Baculovirus polyhedron envelope protein, PEP, C terminus CREPT PF16566.5 RKO94004.1 - 0.029 14.5 8.7 0.48 10.6 0.2 3.6 1 1 3 4 4 4 0 Cell-cycle alteration and expression-elevated protein in tumour DUF3086 PF11285.8 RKO94004.1 - 0.031 13.4 0.4 0.031 13.4 0.4 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF3086) TACC_C PF05010.14 RKO94004.1 - 0.041 13.7 12.2 0.077 12.8 1.8 2.7 1 1 2 3 3 3 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF737 PF05300.11 RKO94004.1 - 0.041 14.2 1.0 0.074 13.4 0.1 1.8 2 0 0 2 2 1 0 Protein of unknown function (DUF737) Prefoldin_2 PF01920.20 RKO94004.1 - 0.049 13.6 8.2 19 5.2 0.3 4.8 3 2 1 4 4 4 0 Prefoldin subunit DUF16 PF01519.16 RKO94004.1 - 0.049 14.1 16.4 0.064 13.7 1.0 4.1 1 1 3 4 4 4 0 Protein of unknown function DUF16 ACP53EA PF06313.11 RKO94004.1 - 0.051 13.8 1.2 3.7 7.8 0.0 3.2 3 1 0 3 3 3 0 Drosophila ACP53EA protein BORCS6 PF10157.9 RKO94004.1 - 0.11 12.7 3.6 0.31 11.2 0.2 2.7 1 1 0 2 2 2 0 BLOC-1-related complex sub-unit 6 Exonuc_VII_L PF02601.15 RKO94004.1 - 0.11 12.0 11.7 41 3.6 11.6 2.2 1 1 0 1 1 1 0 Exonuclease VII, large subunit GAS PF13851.6 RKO94004.1 - 0.15 11.4 15.0 0.24 10.7 3.3 3.6 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding CheZ PF04344.13 RKO94004.1 - 0.15 12.0 5.3 0.24 11.3 0.3 3.1 1 1 2 3 3 3 0 Chemotaxis phosphatase, CheZ ABC_tran_CTD PF16326.5 RKO94004.1 - 0.16 12.2 2.7 2.9 8.2 0.0 3.2 4 0 0 4 4 2 0 ABC transporter C-terminal domain DUF2990 PF11693.8 RKO94004.1 - 0.16 12.1 0.5 2.5 8.3 0.1 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2990) Vac_Fusion PF02346.16 RKO94004.1 - 0.18 11.4 6.4 7.5 6.3 0.2 4.3 4 0 0 4 4 4 0 Chordopoxvirus multifunctional envelope protein A27 CEP63 PF17045.5 RKO94004.1 - 0.19 11.6 8.9 0.087 12.7 1.5 2.7 2 1 1 3 3 3 0 Centrosomal protein of 63 kDa Nup54 PF13874.6 RKO94004.1 - 0.22 11.6 12.1 4.8 7.3 2.6 3.8 1 1 2 3 3 3 0 Nucleoporin complex subunit 54 Tropomyosin_1 PF12718.7 RKO94004.1 - 0.27 11.4 8.8 4.1 7.5 0.3 3.2 1 1 0 3 3 3 0 Tropomyosin like DUF3450 PF11932.8 RKO94004.1 - 0.35 10.1 6.5 0.5 9.6 0.2 3.1 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) Prefoldin_3 PF13758.6 RKO94004.1 - 0.4 10.8 11.6 5.3 7.2 1.8 3.8 2 1 2 4 4 3 0 Prefoldin subunit MCPsignal PF00015.21 RKO94004.1 - 0.41 10.4 5.5 5.8 6.7 0.3 3.1 1 1 2 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF948 PF06103.11 RKO94004.1 - 0.43 10.9 12.9 15 5.9 0.9 4.9 2 1 3 5 5 5 0 Bacterial protein of unknown function (DUF948) FlaC_arch PF05377.11 RKO94004.1 - 0.55 10.7 11.4 2.6 8.5 0.2 4.6 4 1 1 5 5 5 0 Flagella accessory protein C (FlaC) DUF465 PF04325.13 RKO94004.1 - 0.58 10.2 3.6 19 5.4 0.3 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF465) Pil1 PF13805.6 RKO94004.1 - 0.61 9.5 5.9 3 7.3 5.9 2.1 1 1 0 1 1 1 0 Eisosome component PIL1 Laminin_I PF06008.14 RKO94004.1 - 0.61 9.7 11.7 1.8 8.2 2.3 3.3 2 1 1 3 3 3 0 Laminin Domain I HMMR_N PF15905.5 RKO94004.1 - 0.72 9.3 15.6 2.4 7.5 4.4 3.0 2 1 0 3 3 3 0 Hyaluronan mediated motility receptor N-terminal Laminin_II PF06009.12 RKO94004.1 - 0.83 9.7 15.0 0.72 9.9 2.4 3.6 1 1 3 4 4 4 0 Laminin Domain II Holin_BhlA PF10960.8 RKO94004.1 - 1.2 9.2 4.2 0.99 9.4 0.3 2.7 3 0 0 3 3 2 0 BhlA holin family Helo_like_N PF17111.5 RKO94004.1 - 1.2 8.4 9.7 7.4 5.9 1.5 3.4 2 1 2 4 4 4 0 Fungal N-terminal domain of STAND proteins Phasin PF05597.11 RKO94004.1 - 1.3 9.1 8.9 2.7 8.0 0.2 3.8 3 1 1 4 4 4 0 Poly(hydroxyalcanoate) granule associated protein (phasin) YlqD PF11068.8 RKO94004.1 - 1.7 9.0 6.1 3.5 8.0 2.5 3.0 1 1 2 3 3 3 0 YlqD protein BORCS7 PF16088.5 RKO94004.1 - 2 8.7 9.2 1.6 9.0 0.1 3.8 1 1 0 3 3 3 0 BLOC-1-related complex sub-unit 7 IZUMO PF15005.6 RKO94004.1 - 2.6 8.6 5.9 4.9 7.7 0.2 2.8 2 1 1 3 3 3 0 Izumo sperm-egg fusion, Ig domain-associated Noelin-1 PF12308.8 RKO94004.1 - 2.8 8.0 6.0 18 5.4 0.2 3.6 1 1 3 4 4 4 0 Neurogenesis glycoprotein TPR_MLP1_2 PF07926.12 RKO94004.1 - 3.3 7.8 10.3 10 6.2 0.2 3.8 3 1 1 4 4 4 0 TPR/MLP1/MLP2-like protein APG6_N PF17675.1 RKO94004.1 - 3.4 8.2 8.6 46 4.6 0.2 3.2 2 1 0 2 2 2 0 Apg6 coiled-coil region DUF4164 PF13747.6 RKO94004.1 - 3.4 8.0 6.2 7.3 7.0 0.4 3.5 3 1 1 4 4 4 0 Domain of unknown function (DUF4164) DUF4200 PF13863.6 RKO94004.1 - 3.5 8.1 9.1 3 8.3 0.2 3.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4200) Osmo_CC PF08946.10 RKO94004.1 - 3.6 7.9 6.0 78 3.6 0.1 4.3 5 0 0 5 5 4 0 Osmosensory transporter coiled coil YabA PF06156.13 RKO94004.1 - 5 7.8 14.8 9.6 6.9 1.8 3.7 1 1 2 3 3 3 0 Initiation control protein YabA V_ATPase_I PF01496.19 RKO94004.1 - 8 4.2 14.0 1.4 6.8 3.0 2.5 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family SlyX PF04102.12 RKO94004.1 - 9.4 6.9 11.0 32 5.3 0.0 5.0 5 1 0 5 5 4 0 SlyX Cadherin-like PF12733.7 RKO94005.1 - 7.2e-06 26.5 1.3 0.12 12.9 0.1 2.4 2 0 0 2 2 2 2 Cadherin-like beta sandwich domain BPL_LplA_LipB_2 PF16917.5 RKO94005.1 - 0.0086 15.6 0.0 0.69 9.4 0.0 2.2 2 0 0 2 2 2 2 Biotin/lipoate A/B protein ligase family CBM_6 PF03422.15 RKO94005.1 - 0.028 14.7 7.9 0.28 11.5 0.8 2.7 2 1 1 3 3 3 0 Carbohydrate binding module (family 6) CBM60 PF16841.5 RKO94005.1 - 0.081 13.4 0.2 13 6.2 0.0 3.0 3 0 0 3 3 3 0 Ca-dependent carbohydrate-binding module xylan-binding DUF4116 PF13475.6 RKO94006.1 - 0.14 11.9 0.6 0.78 9.5 0.6 2.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4116) SoxZ PF08770.11 RKO94006.1 - 0.15 11.8 2.4 7.1 6.5 0.0 4.4 5 1 1 6 6 6 0 Sulphur oxidation protein SoxZ Borrelia_P83 PF05262.11 RKO94007.1 - 2.1e-05 23.2 11.6 2.4e-05 23.0 11.6 1.1 1 0 0 1 1 1 1 Borrelia P83/100 protein OAR PF03826.17 RKO94007.1 - 0.094 12.6 0.5 0.19 11.6 0.5 1.5 1 0 0 1 1 1 0 OAR domain TMF_TATA_bd PF12325.8 RKO94007.1 - 0.15 12.3 9.7 0.26 11.5 5.6 2.7 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding RPW8 PF05659.11 RKO94007.1 - 0.31 10.7 10.5 0.29 10.8 1.8 3.2 2 1 2 4 4 4 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 LMBR1 PF04791.16 RKO94007.1 - 0.34 9.8 11.4 0.48 9.3 10.9 1.4 1 1 0 1 1 1 0 LMBR1-like membrane protein DUF1759 PF03564.15 RKO94007.1 - 1 9.3 9.0 0.55 10.2 2.2 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1759) DUF4407 PF14362.6 RKO94007.1 - 1 8.6 12.2 1.8 7.8 12.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) V_ATPase_I PF01496.19 RKO94007.1 - 1.2 7.0 6.9 1.6 6.6 6.9 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF1664 PF07889.12 RKO94007.1 - 1.4 9.0 10.1 0.92 9.6 2.6 2.8 1 1 1 3 3 3 0 Protein of unknown function (DUF1664) APG6_N PF17675.1 RKO94007.1 - 3.4 8.2 16.8 0.22 12.1 0.9 2.5 1 1 1 2 2 2 0 Apg6 coiled-coil region Atg14 PF10186.9 RKO94007.1 - 8.3 5.4 14.4 1.1e+02 1.7 14.3 2.0 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 GNAT_acetyltran PF12746.7 RKO94008.1 - 0.029 13.9 0.4 0.065 12.8 0.1 1.8 1 1 1 2 2 2 0 GNAT acetyltransferase Swi6_N PF18530.1 RKO94009.1 - 0.085 13.0 0.0 0.18 12.0 0.0 1.5 1 0 0 1 1 1 0 Swi6 N-terminal domain Glyco_hydro_28 PF00295.17 RKO94010.1 - 4.7e-07 29.2 0.0 6.6e-07 28.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 NYN PF01936.18 RKO94014.1 - 3e-07 31.0 0.0 5.1e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 NYN domain PIN7 PF18475.1 RKO94014.1 - 0.016 15.8 0.0 0.025 15.2 0.0 1.2 1 0 0 1 1 1 0 PIN domain mRNA_cap_C PF03919.15 RKO94015.1 - 4.5e-11 43.4 0.0 9e-11 42.4 0.0 1.5 1 0 0 1 1 1 1 mRNA capping enzyme, C-terminal domain mRNA_cap_enzyme PF01331.19 RKO94015.1 - 9.9e-10 38.6 0.0 1.5e-09 37.9 0.0 1.2 1 0 0 1 1 1 1 mRNA capping enzyme, catalytic domain B12D PF06522.11 RKO94015.1 - 0.00085 19.1 0.0 0.0023 17.7 0.0 1.6 1 0 0 1 1 1 1 NADH-ubiquinone reductase complex 1 MLRQ subunit DUF5133 PF17196.4 RKO94016.1 - 0.37 11.0 2.2 0.79 10.0 2.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF5133) NTP_transf_2 PF01909.23 RKO94018.1 - 1.6e-06 28.3 0.0 7.3e-06 26.2 0.0 2.0 1 1 0 1 1 1 1 Nucleotidyltransferase domain Mcl1_mid PF12341.8 RKO94019.1 - 0.07 12.5 0.0 0.099 12.0 0.0 1.1 1 0 0 1 1 1 0 Minichromosome loss protein, Mcl1, middle region AAA_16 PF13191.6 RKO94020.1 - 1e-29 104.1 0.7 6.1e-29 101.6 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain HATPase_c PF02518.26 RKO94020.1 - 1.3e-26 93.3 0.1 2.8e-26 92.2 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pkinase PF00069.25 RKO94020.1 - 1.1e-16 61.0 0.0 2.3e-16 60.0 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain HisKA PF00512.25 RKO94020.1 - 3.8e-14 52.5 0.0 1.8e-13 50.3 0.0 2.3 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain Pkinase_Tyr PF07714.17 RKO94020.1 - 9.3e-08 31.7 0.0 2e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Response_reg PF00072.24 RKO94020.1 - 2.8e-06 27.5 0.1 6.6e-06 26.3 0.1 1.7 1 0 0 1 1 1 1 Response regulator receiver domain GAF PF01590.26 RKO94020.1 - 1.2e-05 26.0 0.0 0.0005 20.7 0.0 2.9 2 0 0 2 2 2 1 GAF domain GAF_2 PF13185.6 RKO94020.1 - 0.00051 20.4 0.0 0.0026 18.1 0.0 2.3 1 0 0 1 1 1 1 GAF domain NACHT PF05729.12 RKO94020.1 - 0.002 18.0 1.1 0.41 10.5 0.0 3.1 3 0 0 3 3 3 1 NACHT domain CWC25 PF12542.8 RKO94021.1 - 1.3e-23 83.8 5.1 1.6e-23 83.5 0.0 2.1 1 1 1 2 2 2 1 Pre-mRNA splicing factor Cir_N PF10197.9 RKO94021.1 - 2.8e-14 53.0 9.7 2.8e-14 53.0 9.7 2.5 2 0 0 2 2 2 1 N-terminal domain of CBF1 interacting co-repressor CIR Ribosomal_S2 PF00318.20 RKO94021.1 - 0.013 14.7 1.1 0.019 14.2 1.1 1.2 1 0 0 1 1 1 0 Ribosomal protein S2 Glycos_transf_1 PF00534.20 RKO94022.1 - 5.1e-30 104.3 0.0 4.6e-29 101.1 0.0 2.0 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 RKO94022.1 - 2.9e-18 66.6 0.0 5.7e-18 65.7 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 RKO94022.1 - 3e-16 59.9 0.0 4.6e-16 59.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 RKO94022.1 - 7.4e-12 46.0 0.0 1.4e-11 45.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 RKO94022.1 - 0.016 15.6 0.0 0.034 14.5 0.0 1.6 1 0 0 1 1 1 0 Glycosyl transferases group 1 WD40 PF00400.32 RKO94023.1 - 4.4e-10 40.0 1.7 0.00012 22.7 0.0 4.9 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO94023.1 - 0.00037 20.7 0.0 0.27 11.6 0.0 3.2 2 1 0 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain RAB3GAP2_N PF14655.6 RKO94023.1 - 0.15 11.3 0.0 0.28 10.4 0.0 1.4 1 0 0 1 1 1 0 Rab3 GTPase-activating protein regulatory subunit N-terminus SelR PF01641.18 RKO94024.1 - 2.2e-48 163.3 0.0 2.5e-48 163.1 0.0 1.0 1 0 0 1 1 1 1 SelR domain Cytochrome_C7 PF14522.6 RKO94024.1 - 0.00053 19.9 0.1 0.00086 19.3 0.1 1.3 1 0 0 1 1 1 1 Cytochrome c7 and related cytochrome c Yippee-Mis18 PF03226.14 RKO94024.1 - 0.0016 18.6 0.0 0.0024 18.1 0.0 1.3 1 0 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Zn_ribbon_SprT PF17283.2 RKO94024.1 - 0.013 15.4 1.0 3 7.8 0.0 2.5 3 0 0 3 3 3 0 SprT-like zinc ribbon domain DZR PF12773.7 RKO94024.1 - 0.086 12.9 0.1 0.24 11.5 0.0 1.7 2 1 0 2 2 2 0 Double zinc ribbon DUF3463 PF11946.8 RKO94024.1 - 0.089 12.6 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3463) GSu_C4xC__C2xCH PF09698.10 RKO94024.1 - 0.12 13.2 1.1 11 6.9 0.1 2.4 2 0 0 2 2 2 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) PSCyt2 PF07583.11 RKO94024.1 - 0.61 10.0 3.0 0.58 10.1 0.8 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1549) F-box-like PF12937.7 RKO94025.1 - 4.4e-08 32.9 0.6 1.2e-07 31.6 0.6 1.8 1 0 0 1 1 1 1 F-box-like LRR_6 PF13516.6 RKO94025.1 - 0.0081 16.1 0.2 0.36 11.0 0.1 3.2 3 0 0 3 3 3 1 Leucine Rich repeat LRR_4 PF12799.7 RKO94025.1 - 0.012 16.0 1.1 0.15 12.5 0.0 3.1 4 0 0 4 4 4 0 Leucine Rich repeats (2 copies) HTH_Mga PF08280.11 RKO94025.1 - 0.12 12.4 0.1 0.24 11.5 0.1 1.4 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain Ammonium_transp PF00909.21 RKO94026.1 - 3.7e-109 365.0 27.0 4.2e-109 364.9 27.0 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family PK PF00224.21 RKO94027.1 - 2.6e-97 325.8 0.7 3.4e-97 325.4 0.7 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 RKO94027.1 - 7.2e-22 77.8 0.2 1.6e-21 76.7 0.2 1.6 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain RACo_linker PF17650.1 RKO94027.1 - 0.01 15.7 0.0 1.4 8.8 0.0 3.0 3 0 0 3 3 3 0 RACo linker region MRVI1 PF05781.12 RKO94029.1 - 0.16 10.6 0.3 0.32 9.6 0.3 1.4 1 0 0 1 1 1 0 MRVI1 protein PNGaseA PF12222.8 RKO94030.1 - 1.4e-30 106.5 0.1 1.8e-30 106.2 0.1 1.1 1 0 0 1 1 1 1 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A SBP_bac_1 PF01547.25 RKO94032.1 - 1.1e-14 55.1 2.9 1e-09 38.8 0.5 2.5 2 1 0 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 RKO94032.1 - 9.8e-11 42.0 2.8 3e-09 37.1 1.9 2.2 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein BAH PF01426.18 RKO94033.1 - 2.6e-13 49.9 0.0 4.8e-13 49.0 0.0 1.4 2 0 0 2 2 2 1 BAH domain PHD PF00628.29 RKO94033.1 - 1e-05 25.3 11.0 1.7e-05 24.6 11.0 1.4 1 0 0 1 1 1 1 PHD-finger C1_1 PF00130.22 RKO94033.1 - 0.0073 16.2 3.2 0.0073 16.2 3.2 2.2 1 1 1 2 2 2 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Prok-RING_1 PF14446.6 RKO94033.1 - 0.047 13.6 8.4 0.082 12.8 8.0 1.6 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 RRM_1 PF00076.22 RKO94035.1 - 2.5e-45 152.2 0.1 1.7e-21 75.8 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 RKO94035.1 - 4.1e-08 33.2 0.0 0.0014 18.7 0.0 2.4 2 0 0 2 2 2 2 RNA recognition motif RRM_occluded PF16842.5 RKO94035.1 - 2.9e-06 27.0 0.0 0.04 13.8 0.0 2.6 2 1 0 2 2 2 2 Occluded RNA-recognition motif RRM_3 PF08777.11 RKO94035.1 - 0.0001 22.3 0.0 0.32 11.1 0.0 2.3 2 0 0 2 2 2 2 RNA binding motif DUF1866 PF08952.11 RKO94035.1 - 0.00016 21.5 0.0 0.1 12.5 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF1866) RRM_5 PF13893.6 RKO94035.1 - 0.0026 17.4 0.0 0.14 11.8 0.0 2.1 1 1 1 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_Rrp7 PF17799.1 RKO94035.1 - 0.0045 16.8 0.0 0.3 10.9 0.0 2.5 2 1 1 3 3 3 1 Rrp7 RRM-like N-terminal domain Limkain-b1 PF11608.8 RKO94035.1 - 0.072 13.2 0.0 3.7 7.7 0.0 2.5 1 1 1 2 2 2 0 Limkain b1 G-alpha PF00503.20 RKO94036.1 - 1.3e-102 343.6 0.1 1.6e-102 343.3 0.1 1.0 1 0 0 1 1 1 1 G-protein alpha subunit Arf PF00025.21 RKO94036.1 - 6.6e-11 42.0 0.3 5.8e-07 29.1 0.0 2.4 2 0 0 2 2 2 2 ADP-ribosylation factor family GTP_EFTU PF00009.27 RKO94036.1 - 0.00019 21.1 0.2 0.16 11.5 0.1 2.4 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain Roc PF08477.13 RKO94036.1 - 0.0028 17.8 0.3 3.3 7.9 0.1 3.0 2 1 1 3 3 3 2 Ras of Complex, Roc, domain of DAPkinase AAA_24 PF13479.6 RKO94036.1 - 0.048 13.4 0.0 0.088 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 RKO94036.1 - 0.05 13.0 0.0 0.094 12.1 0.0 1.5 1 0 0 1 1 1 0 Bacterial TniB protein AAA_29 PF13555.6 RKO94036.1 - 0.26 11.0 0.5 0.53 10.1 0.0 1.7 2 0 0 2 2 2 0 P-loop containing region of AAA domain Zeta_toxin PF06414.12 RKO94036.1 - 0.31 10.3 1.3 17 4.6 0.1 2.3 2 0 0 2 2 2 0 Zeta toxin MMS1_N PF10433.9 RKO94037.1 - 6.6e-101 338.4 0.0 1.5e-100 337.2 0.0 1.6 1 0 0 1 1 1 1 Mono-functional DNA-alkylating methyl methanesulfonate N-term CPSF_A PF03178.15 RKO94037.1 - 1.9e-47 162.1 0.0 4e-47 161.1 0.0 1.5 1 0 0 1 1 1 1 CPSF A subunit region Lgl_C PF08596.10 RKO94037.1 - 0.038 12.7 0.0 0.31 9.7 0.0 2.4 3 0 0 3 3 3 0 Lethal giant larvae(Lgl) like, C-terminal ANAPC10 PF03256.16 RKO94038.1 - 4.4e-51 173.2 0.1 4.7e-51 173.1 0.1 1.0 1 0 0 1 1 1 1 Anaphase-promoting complex, subunit 10 (APC10) F5_F8_type_C PF00754.25 RKO94038.1 - 6.1e-07 29.6 0.1 7.6e-07 29.3 0.1 1.1 1 0 0 1 1 1 1 F5/8 type C domain Sad1_UNC PF07738.13 RKO94038.1 - 0.00033 20.7 0.0 0.00053 20.0 0.0 1.3 1 0 0 1 1 1 1 Sad1 / UNC-like C-terminal PITH PF06201.13 RKO94038.1 - 0.0092 16.2 0.1 0.011 15.9 0.1 1.1 1 0 0 1 1 1 1 PITH domain APH PF01636.23 RKO94040.1 - 0.02 14.8 0.1 0.1 12.5 0.0 2.2 2 1 0 2 2 2 0 Phosphotransferase enzyme family Kdo PF06293.14 RKO94040.1 - 0.03 13.7 0.0 0.051 12.9 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pneumovirus_M2 PF06436.11 RKO94040.1 - 0.15 11.5 0.0 0.27 10.7 0.0 1.3 1 0 0 1 1 1 0 Pneumovirus matrix protein 2 (M2) Fic PF02661.18 RKO94041.1 - 1.1e-09 39.1 0.0 2.3e-09 38.0 0.0 1.6 1 0 0 1 1 1 1 Fic/DOC family Cytomega_TRL10 PF06084.11 RKO94041.1 - 0.042 13.9 0.1 0.059 13.4 0.1 1.2 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein Exo_endo_phos PF03372.23 RKO94045.1 - 6.7e-11 42.1 2.6 9.9e-11 41.6 0.0 2.6 2 2 0 2 2 2 1 Endonuclease/Exonuclease/phosphatase family Osmo_MPGsynth PF09488.10 RKO94045.1 - 0.19 10.4 0.2 0.29 9.8 0.2 1.1 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) RNA_ligase PF09414.10 RKO94046.1 - 1.8e-24 86.9 0.0 3.3e-24 86.0 0.0 1.4 1 0 0 1 1 1 1 RNA ligase AAA_33 PF13671.6 RKO94046.1 - 1.8e-09 37.9 0.1 6.8e-07 29.5 0.1 2.6 1 1 0 1 1 1 1 AAA domain Y_phosphatase PF00102.27 RKO94046.1 - 0.00016 21.3 0.0 0.00026 20.6 0.0 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 RKO94046.1 - 0.00033 20.8 0.0 0.00057 20.0 0.0 1.3 1 0 0 1 1 1 1 Inositol hexakisphosphate AAA_25 PF13481.6 RKO94046.1 - 0.0011 18.6 0.0 0.0023 17.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain Y_phosphatase3 PF13350.6 RKO94046.1 - 0.0016 18.5 0.0 0.0024 17.9 0.0 1.3 1 0 0 1 1 1 1 Tyrosine phosphatase family KTI12 PF08433.10 RKO94046.1 - 0.0073 15.8 0.0 0.14 11.6 0.0 2.1 2 0 0 2 2 2 1 Chromatin associated protein KTI12 AAA_18 PF13238.6 RKO94046.1 - 0.011 16.3 0.0 0.2 12.2 0.0 2.3 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 RKO94046.1 - 0.04 13.2 0.0 0.071 12.4 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin 6PF2K PF01591.18 RKO94046.1 - 0.051 12.9 0.0 0.095 12.0 0.0 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase TPR_16 PF13432.6 RKO94046.1 - 0.066 13.9 0.0 0.18 12.5 0.0 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat DSPc PF00782.20 RKO94046.1 - 0.095 12.5 0.0 0.25 11.2 0.0 1.6 2 0 0 2 2 1 0 Dual specificity phosphatase, catalytic domain DUF442 PF04273.13 RKO94046.1 - 0.13 12.3 0.0 0.3 11.2 0.0 1.5 1 0 0 1 1 1 0 Putative phosphatase (DUF442) AAA_22 PF13401.6 RKO94046.1 - 0.2 11.9 0.0 0.4 11.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain Cytochrom_B_C PF00032.17 RKO94049.1 - 7.8e-37 125.7 5.0 7.8e-37 125.7 5.0 2.2 3 1 0 3 3 3 1 Cytochrome b(C-terminal)/b6/petD Cytochrom_B_N_2 PF13631.6 RKO94049.1 - 4.5e-11 43.1 0.3 4.5e-11 43.1 0.3 2.2 2 0 0 2 2 2 1 Cytochrome b(N-terminal)/b6/petB Cytochrome_B PF00033.19 RKO94049.1 - 7.2e-08 32.5 2.0 7.2e-08 32.5 2.0 2.1 2 0 0 2 2 2 1 Cytochrome b/b6/petB FRB_dom PF08771.11 RKO94050.1 - 5.1e-06 26.8 0.8 0.16 12.4 0.1 3.0 3 1 0 3 3 3 2 FKBP12-rapamycin binding domain DUF2201_N PF13203.6 RKO94050.1 - 0.055 13.1 0.2 0.074 12.6 0.2 1.2 1 0 0 1 1 1 0 Putative metallopeptidase domain PI3_PI4_kinase PF00454.27 RKO94051.1 - 2.8e-48 164.9 0.0 3.4e-48 164.7 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase PQQ_2 PF13360.6 RKO94053.1 - 2.1e-13 50.4 0.1 2.5e-07 30.5 0.1 2.6 1 1 1 2 2 2 2 PQQ-like domain PQQ_3 PF13570.6 RKO94053.1 - 2.3e-07 31.1 5.0 0.018 15.5 0.1 6.0 6 0 0 6 6 6 1 PQQ-like domain PQQ PF01011.21 RKO94053.1 - 2.9e-06 26.9 0.3 0.034 14.1 0.0 4.7 6 0 0 6 6 6 2 PQQ enzyme repeat HTH_Tnp_ISL3 PF13542.6 RKO94053.1 - 0.083 12.3 0.3 5.3 6.5 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Tim17 PF02466.19 RKO94054.1 - 7.1e-05 23.1 2.4 7.1e-05 23.1 2.4 1.8 2 0 0 2 2 2 1 Tim17/Tim22/Tim23/Pmp24 family TMEM135_C_rich PF15982.5 RKO94054.1 - 0.00022 21.9 1.9 0.0053 17.4 0.3 2.4 2 0 0 2 2 2 2 N-terminal cysteine-rich region of Transmembrane protein 135 RabGAP-TBC PF00566.18 RKO94055.1 - 2.6e-29 102.4 0.8 1.3e-14 54.4 0.0 2.5 2 1 0 2 2 2 2 Rab-GTPase-TBC domain Tyrosinase PF00264.20 RKO94056.1 - 2.9e-34 119.3 11.7 5.3e-34 118.4 11.7 1.5 1 0 0 1 1 1 1 Common central domain of tyrosinase TFIIA PF03153.13 RKO94059.1 - 0.013 15.6 14.8 0.016 15.2 14.8 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Viral_env_E26 PF11050.8 RKO94059.1 - 0.27 10.6 3.3 0.54 9.6 3.3 1.4 1 0 0 1 1 1 0 Virus envelope protein E26 SR-25 PF10500.9 RKO94059.1 - 0.65 9.6 28.0 0.027 14.1 13.4 2.5 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein ASD2 PF08687.11 RKO94059.1 - 2.4 7.6 17.6 0.049 13.2 7.4 2.1 1 1 1 2 2 2 0 Apx/Shroom domain ASD2 SNF2_N PF00176.23 RKO94060.1 - 7.8e-62 209.0 0.0 1.2e-61 208.4 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 RKO94060.1 - 3.2e-17 62.8 0.0 5.7e-17 62.1 0.0 1.4 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 RKO94060.1 - 6.9e-09 35.9 0.0 1.4e-08 34.9 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HDA2-3 PF11496.8 RKO94060.1 - 3.1e-05 23.3 0.0 8.6e-05 21.8 0.0 1.6 1 1 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 DEAD PF00270.29 RKO94060.1 - 6.5e-05 22.8 0.0 0.00012 21.9 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase ERCC3_RAD25_C PF16203.5 RKO94060.1 - 0.0013 18.0 0.1 0.002 17.4 0.1 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase SWI2_SNF2 PF18766.1 RKO94060.1 - 0.0015 18.3 0.0 0.0033 17.1 0.0 1.5 1 0 0 1 1 1 1 SWI2/SNF2 ATPase AAA_22 PF13401.6 RKO94060.1 - 0.019 15.2 0.0 0.058 13.7 0.0 1.9 1 1 0 1 1 1 0 AAA domain N2227 PF07942.12 RKO94061.1 - 7.5e-92 307.4 0.0 8.3e-92 307.2 0.0 1.0 1 0 0 1 1 1 1 N2227-like protein Methyltransf_11 PF08241.12 RKO94061.1 - 4.3e-06 27.3 0.0 1e-05 26.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 RKO94061.1 - 7.5e-05 23.4 0.0 0.00023 21.9 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 RKO94061.1 - 0.003 17.4 0.0 0.0093 15.8 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 RKO94061.1 - 0.0049 17.5 0.0 0.017 15.8 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain NNMT_PNMT_TEMT PF01234.17 RKO94061.1 - 0.012 14.8 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 NNMT/PNMT/TEMT family Methyltransf_8 PF05148.15 RKO94061.1 - 0.038 13.8 0.0 0.061 13.2 0.0 1.4 1 0 0 1 1 1 0 Hypothetical methyltransferase Methyltransf_31 PF13847.6 RKO94061.1 - 0.082 12.7 0.0 0.25 11.1 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain Ubie_methyltran PF01209.18 RKO94061.1 - 0.089 12.1 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_29 PF03141.16 RKO94061.1 - 0.15 10.6 0.0 0.2 10.2 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase F-box-like PF12937.7 RKO94062.1 - 1.1e-07 31.6 0.7 2.8e-07 30.3 0.1 2.1 2 0 0 2 2 2 1 F-box-like LRR_4 PF12799.7 RKO94062.1 - 0.0014 19.0 0.0 4.9 7.7 0.0 4.5 5 0 0 5 5 5 1 Leucine Rich repeats (2 copies) F-box PF00646.33 RKO94062.1 - 0.035 14.0 1.7 0.098 12.6 0.0 2.5 3 0 0 3 3 3 0 F-box domain cpYpsA PF12694.7 RKO94062.1 - 0.18 11.6 0.0 0.32 10.8 0.0 1.3 1 0 0 1 1 1 0 Circularly permutated YpsA SLOG family Mt_ATP-synt_B PF05405.14 RKO94063.1 - 3.8e-36 124.2 2.9 4.5e-36 123.9 2.9 1.0 1 0 0 1 1 1 1 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) DUF1539 PF07560.11 RKO94063.1 - 0.01 15.9 0.9 0.017 15.2 0.7 1.4 1 1 0 1 1 1 0 Domain of Unknown Function (DUF1539) DUF3376 PF11856.8 RKO94063.1 - 0.012 14.6 2.6 0.017 14.2 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3376) APC_N_CC PF16689.5 RKO94063.1 - 0.055 13.5 0.0 0.18 11.9 0.0 1.9 1 0 0 1 1 1 0 Coiled-coil N-terminus of APC, dimerisation domain Type2_restr_D3 PF16902.5 RKO94063.1 - 0.16 11.9 0.6 0.55 10.2 0.0 2.1 2 0 0 2 2 2 0 Type-2 restriction enzyme D3 domain AAA_6 PF12774.7 RKO94066.1 - 5.5e-159 528.4 0.0 2.2e-157 523.2 0.0 2.8 3 0 0 3 3 3 1 Hydrolytic ATP binding site of dynein motor region DHC_N2 PF08393.13 RKO94066.1 - 1.9e-143 478.4 11.5 1.9e-143 478.4 11.5 4.1 4 0 0 4 4 4 1 Dynein heavy chain, N-terminal region 2 Dynein_C PF18199.1 RKO94066.1 - 3.6e-109 364.7 0.0 7.5e-109 363.7 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_8 PF12780.7 RKO94066.1 - 1.3e-106 355.7 0.0 3.5e-106 354.3 0.0 1.8 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 RKO94066.1 - 5.6e-88 293.8 0.2 5.6e-88 293.8 0.2 2.6 3 0 0 3 3 3 1 ATP-binding dynein motor region AAA_7 PF12775.7 RKO94066.1 - 1.2e-84 282.4 0.1 5.9e-83 276.8 0.0 2.9 3 0 0 3 3 2 1 P-loop containing dynein motor region AAA_lid_11 PF18198.1 RKO94066.1 - 2e-62 209.9 0.0 5.6e-62 208.4 0.0 1.9 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain MT PF12777.7 RKO94066.1 - 3e-56 190.9 7.4 1e-55 189.1 7.4 1.9 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Dynein_heavy PF03028.15 RKO94066.1 - 2.2e-46 156.8 0.0 4.9e-43 146.0 0.0 3.6 3 0 0 3 3 2 1 Dynein heavy chain region D6 P-loop domain Dynein_AAA_lid PF17852.1 RKO94066.1 - 1.5e-34 118.9 0.0 7.3e-34 116.6 0.0 2.4 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_lid_1 PF17857.1 RKO94066.1 - 5.5e-19 68.2 0.1 1.4e-17 63.8 0.0 2.8 2 0 0 2 2 2 1 AAA+ lid domain AAA_5 PF07728.14 RKO94066.1 - 9.2e-18 64.6 0.0 0.00088 19.3 0.0 6.3 5 1 0 5 5 5 3 AAA domain (dynein-related subfamily) AAA PF00004.29 RKO94066.1 - 1.8e-08 34.8 0.0 0.045 14.2 0.0 5.2 4 0 0 4 4 4 2 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 RKO94066.1 - 0.00072 20.0 0.5 1.6 9.1 0.0 4.6 4 1 0 4 4 4 1 AAA ATPase domain AAA_22 PF13401.6 RKO94066.1 - 0.0042 17.4 0.8 16 5.8 0.0 5.0 5 0 0 5 5 4 0 AAA domain RNA_helicase PF00910.22 RKO94066.1 - 0.0051 17.2 0.4 13 6.2 0.0 4.3 4 0 0 4 4 3 0 RNA helicase T2SSE PF00437.20 RKO94066.1 - 0.0074 15.4 0.0 0.031 13.3 0.0 2.1 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_24 PF13479.6 RKO94066.1 - 0.025 14.3 1.7 9.4 5.9 0.0 3.8 4 0 0 4 4 4 0 AAA domain EF-hand_6 PF13405.6 RKO94066.1 - 0.068 13.1 0.6 0.5 10.4 0.6 2.6 1 0 0 1 1 1 0 EF-hand domain AAA_18 PF13238.6 RKO94066.1 - 0.073 13.6 0.3 3.9 8.0 0.0 3.6 3 0 0 3 3 3 0 AAA domain AAA_33 PF13671.6 RKO94066.1 - 0.098 12.8 0.8 34 4.6 0.1 3.6 3 0 0 3 3 3 0 AAA domain DUF853 PF05872.12 RKO94066.1 - 0.11 11.1 2.2 34 2.9 0.0 4.1 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF853) Mg_chelatase PF01078.21 RKO94066.1 - 0.17 11.3 0.0 18 4.6 0.0 2.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_30 PF13604.6 RKO94066.1 - 0.46 10.2 8.9 1.2 8.9 0.2 4.1 4 0 0 4 4 4 0 AAA domain EF-hand_1 PF00036.32 RKO94066.1 - 0.61 9.8 5.6 0.13 11.8 0.4 2.8 3 0 0 3 3 1 0 EF hand Latarcin PF10279.9 RKO94066.1 - 8.3 6.9 6.0 26 5.3 0.4 3.3 2 0 0 2 2 2 0 Latarcin precursor RRM_1 PF00076.22 RKO94069.1 - 1e-10 41.2 0.0 2.7e-08 33.5 0.0 2.4 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PAP_assoc PF03828.19 RKO94069.1 - 0.0019 18.4 0.0 0.0042 17.3 0.0 1.6 1 0 0 1 1 1 1 Cid1 family poly A polymerase PCI PF01399.27 RKO94070.1 - 7.5e-21 74.6 0.0 2.3e-20 73.0 0.0 1.8 1 0 0 1 1 1 1 PCI domain RPN5_C PF18098.1 RKO94070.1 - 1e-16 60.7 5.9 2.3e-16 59.6 5.9 1.6 1 0 0 1 1 1 1 26S proteasome regulatory subunit RPN5 C-terminal domain VBS PF08913.10 RKO94070.1 - 0.1 13.1 0.0 0.21 12.0 0.0 1.5 1 0 0 1 1 1 0 Vinculin Binding Site PPR_2 PF13041.6 RKO94071.1 - 1.2e-14 54.3 0.6 0.0012 19.0 0.0 10.3 12 0 0 12 12 12 2 PPR repeat family PPR PF01535.20 RKO94071.1 - 5.5e-12 45.1 6.2 10 6.6 0.0 10.7 11 0 0 11 11 11 3 PPR repeat PPR_3 PF13812.6 RKO94071.1 - 1.7e-11 44.0 0.0 0.0026 17.8 0.0 5.7 6 0 0 6 6 6 3 Pentatricopeptide repeat domain PPR_long PF17177.4 RKO94071.1 - 1.4e-05 24.5 3.0 0.2 11.0 0.0 5.1 5 1 0 5 5 5 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 RKO94071.1 - 0.015 15.0 0.1 10 5.9 0.0 4.2 4 0 0 4 4 4 0 PPR repeat DAGK_cat PF00781.24 RKO94072.1 - 3.7e-22 78.3 0.0 5.5e-22 77.7 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain gag_pre-integrs PF13976.6 RKO94076.1 - 0.0012 18.6 0.1 0.0018 18.1 0.1 1.3 1 0 0 1 1 1 1 GAG-pre-integrase domain CHCH PF06747.13 RKO94077.1 - 1.6e-06 28.1 1.7 2.1e-06 27.7 1.7 1.2 1 0 0 1 1 1 1 CHCH domain COX17 PF05051.13 RKO94077.1 - 0.00035 20.9 3.0 0.034 14.5 0.2 2.2 1 1 1 2 2 2 2 Cytochrome C oxidase copper chaperone (COX17) NDUF_B7 PF05676.13 RKO94077.1 - 0.018 14.8 0.1 0.019 14.6 0.1 1.1 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) Pet191_N PF10203.9 RKO94077.1 - 0.027 14.8 2.9 0.18 12.1 3.3 1.8 1 1 1 2 2 2 0 Cytochrome c oxidase assembly protein PET191 Cmc1 PF08583.10 RKO94077.1 - 0.092 12.8 2.4 0.36 10.9 2.4 1.7 1 1 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like UPF0203 PF05254.12 RKO94077.1 - 0.39 11.0 2.0 10 6.5 0.1 2.1 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0203) Yae1_N PF09811.9 RKO94078.1 - 0.0018 17.9 3.0 0.0036 17.0 3.0 1.5 1 0 0 1 1 1 1 Essential protein Yae1, N terminal rve_3 PF13683.6 RKO94081.1 - 0.0076 16.0 0.0 0.023 14.5 0.0 1.9 1 0 0 1 1 1 1 Integrase core domain F-box PF00646.33 RKO94082.1 - 0.017 15.0 5.0 0.017 15.0 5.0 2.0 2 0 0 2 2 2 0 F-box domain Cerato-platanin PF07249.12 RKO94083.1 - 0.024 14.8 0.2 0.049 13.8 0.2 1.5 1 0 0 1 1 1 0 Cerato-platanin AAA_34 PF13872.6 RKO94085.1 - 3.2e-116 387.4 0.0 6.1e-116 386.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing NTP hydrolase pore-1 Helicase_C_4 PF13871.6 RKO94085.1 - 1.1e-85 287.6 0.3 2.2e-85 286.6 0.1 1.6 2 0 0 2 2 2 1 C-terminal domain on Strawberry notch homologue ResIII PF04851.15 RKO94085.1 - 8.2e-05 22.7 0.0 0.00017 21.6 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit MTS PF05175.14 RKO94085.1 - 0.018 14.6 0.0 0.057 13.0 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase small domain DUF4326 PF14216.6 RKO94086.1 - 1.6e-22 80.0 0.0 6.2e-22 78.1 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4326) ParBc PF02195.18 RKO94087.1 - 7.5e-08 32.6 0.0 1.9e-07 31.3 0.0 1.8 1 0 0 1 1 1 1 ParB-like nuclease domain Sigma70_r4_2 PF08281.12 RKO94087.1 - 0.076 12.7 0.4 1.1 9.0 0.0 3.0 3 0 0 3 3 3 0 Sigma-70, region 4 TetR_C_15 PF17918.1 RKO94087.1 - 7.8 7.3 9.4 0.68 10.7 0.3 3.6 4 1 0 4 4 4 0 Tetracyclin repressor-like, C-terminal domain LysR_substrate PF03466.20 RKO94088.1 - 1.5e-19 70.2 1.3 4.4e-19 68.7 1.3 1.8 1 0 0 1 1 1 1 LysR substrate binding domain HTH_1 PF00126.27 RKO94088.1 - 1.1e-15 57.3 1.1 3e-15 55.9 1.1 1.9 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_30 PF13556.6 RKO94088.1 - 0.0043 16.8 0.6 0.014 15.2 0.6 1.8 1 0 0 1 1 1 1 PucR C-terminal helix-turn-helix domain DUF932 PF06067.11 RKO94088.1 - 0.017 14.9 0.0 0.049 13.4 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF932) HTH_50 PF18024.1 RKO94088.1 - 0.041 13.5 0.4 0.092 12.4 0.4 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain RWP-RK PF02042.15 RKO94088.1 - 0.15 12.0 0.1 0.58 10.2 0.0 1.9 2 0 0 2 2 2 0 RWP-RK domain Na_Pi_cotrans PF02690.15 RKO94089.1 - 3.4e-42 143.8 17.6 3.3e-30 105.0 5.1 2.3 2 0 0 2 2 2 2 Na+/Pi-cotransporter PhoU PF01895.19 RKO94089.1 - 3.6e-16 59.4 2.4 5.8e-11 42.7 0.2 2.4 2 0 0 2 2 2 2 PhoU domain ACR_tran PF00873.19 RKO94090.1 - 1.3e-219 731.5 3.1 1.7e-219 731.1 3.1 1.1 1 0 0 1 1 1 1 AcrB/AcrD/AcrF family OEP PF02321.18 RKO94090.1 - 5.1e-37 127.5 33.8 1.2e-20 74.1 12.2 3.2 3 0 0 3 3 3 2 Outer membrane efflux protein MMPL PF03176.15 RKO94090.1 - 2.8e-09 36.4 9.1 2.8e-09 36.4 9.1 2.9 2 0 0 2 2 2 2 MMPL family Use1 PF09753.9 RKO94094.1 - 1.2e-06 28.5 0.6 1.8e-06 27.9 0.6 1.2 1 0 0 1 1 1 1 Membrane fusion protein Use1 SNARE PF05739.19 RKO94094.1 - 3.2e-06 27.0 0.5 3.2e-06 27.0 0.5 1.6 2 0 0 2 2 1 1 SNARE domain SKA1 PF07160.12 RKO94094.1 - 0.0057 16.5 8.3 0.0071 16.2 0.5 2.1 2 0 0 2 2 2 1 Spindle and kinetochore-associated protein 1 Laminin_II PF06009.12 RKO94094.1 - 0.013 15.5 1.9 0.013 15.5 1.9 2.1 2 0 0 2 2 2 0 Laminin Domain II TMPIT PF07851.13 RKO94094.1 - 0.22 10.7 0.1 0.22 10.7 0.1 2.1 2 0 0 2 2 2 0 TMPIT-like protein DUF745 PF05335.13 RKO94094.1 - 0.57 9.9 9.5 0.27 10.9 1.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF745) DUF1664 PF07889.12 RKO94094.1 - 0.67 10.0 9.0 0.2 11.7 2.7 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1664) APG17 PF04108.12 RKO94094.1 - 0.72 8.9 7.9 1.5 7.9 0.4 2.2 2 0 0 2 2 2 0 Autophagy protein Apg17 NPV_P10 PF05531.12 RKO94094.1 - 1.1 9.7 6.6 1.3 9.5 2.5 2.7 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF16 PF01519.16 RKO94094.1 - 1.3 9.5 12.1 0.14 12.7 2.4 2.4 2 0 0 2 2 2 0 Protein of unknown function DUF16 DUF948 PF06103.11 RKO94094.1 - 2.2 8.6 4.5 1.5 9.2 0.8 2.5 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF572 PF04502.13 RKO94094.1 - 2.6 7.6 8.6 4.3 6.9 8.6 1.2 1 1 0 1 1 1 0 Family of unknown function (DUF572) ISG65-75 PF11727.8 RKO94094.1 - 3.1 7.0 8.0 1.4 8.1 0.8 2.1 2 0 0 2 2 2 0 Invariant surface glycoprotein HisKA PF00512.25 RKO94094.1 - 3.4 7.8 5.1 21 5.3 0.1 3.0 2 2 1 3 3 3 0 His Kinase A (phospho-acceptor) domain HOOK PF05622.12 RKO94094.1 - 4 5.5 14.8 0.12 10.6 1.9 2.1 2 0 0 2 2 2 0 HOOK protein I_LWEQ PF01608.17 RKO94095.1 - 6.3e-69 231.1 151.9 3.4e-43 147.5 5.8 16.6 5 3 10 17 17 16 9 I/LWEQ domain FERM_M PF00373.18 RKO94095.1 - 1.3e-27 96.5 0.2 1.2e-26 93.4 0.0 2.9 3 0 0 3 3 2 1 FERM central domain Talin_middle PF09141.10 RKO94095.1 - 3.4e-27 95.5 4.6 3.4e-27 95.5 4.6 16.4 7 5 5 15 15 13 3 Talin, middle domain FERM_f0 PF16511.5 RKO94095.1 - 1.2e-20 73.6 0.0 2.9e-18 66.0 0.0 3.3 3 0 0 3 3 3 1 N-terminal or F0 domain of Talin-head FERM VBS PF08913.10 RKO94095.1 - 1.6e-09 38.3 12.8 3.7e-08 33.9 1.8 12.7 12 2 2 14 14 14 4 Vinculin Binding Site FERM_N PF09379.10 RKO94095.1 - 3.3e-09 36.5 0.0 1.2e-08 34.7 0.0 2.1 1 0 0 1 1 1 1 FERM N-terminal domain IRS PF02174.17 RKO94095.1 - 0.00019 21.3 0.0 0.00046 20.0 0.0 1.6 1 0 0 1 1 1 1 PTB domain (IRS-1 type) Kindlin_2_N PF18124.1 RKO94095.1 - 0.001 19.2 0.0 0.0024 18.0 0.0 1.6 1 0 0 1 1 1 1 Kindlin-2 N-terminal domain DUF4452 PF14618.6 RKO94095.1 - 0.055 13.3 3.9 0.2 11.5 3.9 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4452) PTB PF08416.13 RKO94095.1 - 0.096 12.8 0.7 0.52 10.5 0.1 2.6 3 0 0 3 3 2 0 Phosphotyrosine-binding domain DUF2551 PF10826.8 RKO94095.1 - 0.16 12.3 3.0 0.81 10.0 0.2 3.3 4 0 0 4 4 4 0 Protein of unknown function (DUF2551) ParcG PF10274.9 RKO94095.1 - 0.19 11.9 0.2 0.62 10.2 0.2 1.9 1 0 0 1 1 1 0 Parkin co-regulated protein DUF3994 PF13159.6 RKO94095.1 - 0.34 11.5 2.2 39 4.9 0.1 3.6 3 0 0 3 3 3 0 Domain of unknown function (DUF3994) Spore_III_AB PF09548.10 RKO94095.1 - 8.7 6.4 9.6 31 4.6 0.1 5.7 5 2 1 6 6 6 0 Stage III sporulation protein AB (spore_III_AB) Glyoxalase PF00903.25 RKO94100.1 - 8.5e-17 61.6 0.0 1.2e-16 61.0 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 RKO94100.1 - 0.00057 20.1 0.0 0.0012 19.1 0.0 1.5 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 RKO94100.1 - 0.029 14.5 0.0 0.082 13.0 0.0 1.8 2 0 0 2 2 2 0 Glyoxalase-like domain Abhydrolase_3 PF07859.13 RKO94101.1 - 3.7e-34 118.4 0.0 6.9e-25 88.2 0.0 2.3 2 0 0 2 2 2 2 alpha/beta hydrolase fold Say1_Mug180 PF10340.9 RKO94101.1 - 0.014 14.3 0.0 0.028 13.3 0.0 1.4 2 0 0 2 2 2 0 Steryl acetyl hydrolase Adaptin_binding PF10199.9 RKO94102.1 - 1.7 9.2 11.0 14 6.3 11.0 2.1 1 1 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 Eapp_C PF10238.9 RKO94102.1 - 2.2 8.3 6.4 0.19 11.8 1.4 1.8 2 0 0 2 2 2 0 E2F-associated phosphoprotein Dicty_REP PF05086.12 RKO94102.1 - 3.5 5.5 7.2 4.9 5.0 7.2 1.1 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein SulA PF03846.14 RKO94103.1 - 0.14 12.1 0.2 0.2 11.6 0.2 1.2 1 0 0 1 1 1 0 Cell division inhibitor SulA TMV_coat PF00721.21 RKO94104.1 - 0.0007 19.5 0.0 0.0013 18.6 0.0 1.4 1 0 0 1 1 1 1 Virus coat protein (TMV like) Sec16_C PF12931.7 RKO94105.1 - 4.3e-65 220.3 0.0 6.1e-65 219.9 0.0 1.1 1 0 0 1 1 1 1 Sec23-binding domain of Sec16 TPR_2 PF07719.17 RKO94106.1 - 6.2e-10 38.4 0.0 1.7e-06 27.7 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 RKO94106.1 - 8.5e-09 34.9 0.0 7.9e-07 28.6 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 RKO94106.1 - 1.3e-06 28.2 0.1 0.00075 19.5 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.6 RKO94106.1 - 1.3e-05 25.6 0.0 1.8e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_11 PF13414.6 RKO94106.1 - 2.3e-05 24.0 0.1 0.001 18.7 0.0 2.2 2 0 0 2 2 2 1 TPR repeat ANAPC3 PF12895.7 RKO94106.1 - 8.6e-05 22.7 0.1 0.00011 22.4 0.1 1.1 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 RKO94106.1 - 0.00018 21.3 0.0 0.36 11.0 0.0 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 RKO94106.1 - 0.0022 18.7 0.0 0.18 12.7 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_20 PF14561.6 RKO94106.1 - 0.036 14.4 0.0 0.048 14.0 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_6 PF13174.6 RKO94106.1 - 0.11 13.2 0.0 13 6.7 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_16 PF13432.6 RKO94106.1 - 0.13 12.9 0.0 0.23 12.1 0.0 1.4 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_12 PF13424.6 RKO94106.1 - 0.16 12.2 0.0 2 8.8 0.0 2.0 1 1 0 1 1 1 0 Tetratricopeptide repeat Ras PF00071.22 RKO94107.1 - 2.1e-35 121.7 0.0 2.4e-35 121.5 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 RKO94107.1 - 2.9e-17 63.0 0.0 4.5e-17 62.4 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 RKO94107.1 - 5.1e-06 26.1 0.0 6.2e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family PduV-EutP PF10662.9 RKO94107.1 - 0.0038 17.0 0.0 0.0088 15.8 0.0 1.6 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation AAA_16 PF13191.6 RKO94107.1 - 0.023 15.1 0.0 0.025 14.9 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain Sigma54_activat PF00158.26 RKO94107.1 - 0.039 13.7 0.0 0.16 11.7 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain RsgA_GTPase PF03193.16 RKO94107.1 - 0.058 13.3 0.0 0.34 10.8 0.0 2.0 2 0 0 2 2 2 0 RsgA GTPase TniB PF05621.11 RKO94107.1 - 0.1 12.0 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein SRPRB PF09439.10 RKO94107.1 - 0.17 11.3 0.0 0.25 10.7 0.0 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Vut_1 PF02592.15 RKO94108.1 - 0.22 11.9 0.0 0.26 11.6 0.0 1.1 1 0 0 1 1 1 0 Putative vitamin uptake transporter Ribosomal_L44 PF00935.19 RKO94109.1 - 1.1e-37 128.4 10.3 1.7e-37 127.7 10.3 1.3 1 0 0 1 1 1 1 Ribosomal protein L44 CHORD PF04968.12 RKO94110.1 - 9.7e-52 173.6 16.5 1.3e-28 99.5 6.0 2.3 2 0 0 2 2 2 2 CHORD CS PF04969.16 RKO94110.1 - 5.8e-15 56.1 0.4 8.8e-15 55.5 0.4 1.3 1 0 0 1 1 1 1 CS domain DUF4508 PF14969.6 RKO94111.1 - 0.0013 18.9 0.1 0.0015 18.8 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4508) DUF3584 PF12128.8 RKO94111.1 - 0.023 12.2 0.1 0.029 11.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Asp2 PF16929.5 RKO94111.1 - 0.11 11.5 0.0 0.11 11.5 0.0 1.0 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter SAM_2 PF07647.17 RKO94112.1 - 8.2e-08 32.3 0.0 1.1e-07 31.8 0.0 1.3 1 1 0 1 1 1 1 SAM domain (Sterile alpha motif) SAM_1 PF00536.30 RKO94112.1 - 1.5e-07 31.8 0.0 1.7e-07 31.6 0.0 1.0 1 0 0 1 1 1 1 SAM domain (Sterile alpha motif) Exo_endo_phos PF03372.23 RKO94113.1 - 1.5e-22 80.3 1.8 1e-21 77.6 1.8 2.1 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family LRR_8 PF13855.6 RKO94113.1 - 1.2e-13 50.6 13.4 7.5e-08 32.0 1.9 2.4 1 1 2 3 3 3 3 Leucine rich repeat LRR_4 PF12799.7 RKO94113.1 - 6.2e-12 45.5 0.9 1.5e-05 25.3 0.4 2.9 3 0 0 3 3 3 2 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 RKO94113.1 - 0.062 13.9 0.0 83 4.3 0.0 3.9 4 0 0 4 4 4 0 Leucine Rich Repeat LRR_6 PF13516.6 RKO94113.1 - 0.11 12.6 2.0 33 4.9 0.1 3.6 4 0 0 4 4 4 0 Leucine Rich repeat Anti-TRAP PF15777.5 RKO94115.1 - 0.0013 18.7 2.4 0.0032 17.4 2.4 1.6 1 0 0 1 1 1 1 Tryptophan RNA-binding attenuator protein inhibitory protein DnaJ_CXXCXGXG PF00684.19 RKO94115.1 - 0.0053 17.1 0.1 0.013 15.9 0.1 1.6 1 0 0 1 1 1 1 DnaJ central domain Methyltransf_25 PF13649.6 RKO94115.1 - 0.038 14.7 0.0 0.12 13.1 0.0 1.8 1 0 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 RKO94115.1 - 0.07 12.5 0.0 0.096 12.1 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Octopine_DH PF02317.17 RKO94115.1 - 0.11 12.6 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain HEAT PF02985.22 RKO94116.1 - 0.00047 20.2 7.9 2.5 8.6 0.1 5.5 5 0 0 5 5 5 1 HEAT repeat HEAT_2 PF13646.6 RKO94116.1 - 0.00055 20.3 4.4 0.5 10.8 0.9 4.1 3 1 1 4 4 4 2 HEAT repeats Adaptin_N PF01602.20 RKO94116.1 - 0.068 11.7 0.0 2 6.9 0.0 2.3 2 1 0 2 2 2 0 Adaptin N terminal region RTP1_C1 PF10363.9 RKO94116.1 - 0.075 13.2 0.1 4.9 7.4 0.0 3.1 3 1 1 4 4 4 0 Required for nuclear transport of RNA pol II C-terminus 1 HEAT_EZ PF13513.6 RKO94116.1 - 0.1 13.1 6.7 0.89 10.1 0.9 3.2 3 0 0 3 3 3 0 HEAT-like repeat Integrase_H2C2 PF17921.1 RKO94117.1 - 5.9e-05 23.1 0.0 0.00013 22.0 0.0 1.5 1 0 0 1 1 1 1 Integrase zinc binding domain BclA_C PF18573.1 RKO94120.1 - 0.025 14.5 1.0 0.05 13.5 1.0 1.4 1 0 0 1 1 1 0 BclA C-terminal domain DHC_N1 PF08385.12 RKO94122.1 - 1.5e-163 545.4 14.4 1.5e-163 545.4 14.4 3.5 3 0 0 3 3 3 1 Dynein heavy chain, N-terminal region 1 AAA_6 PF12774.7 RKO94122.1 - 7.5e-163 541.1 3.0 5e-161 535.1 0.0 3.2 3 0 0 3 3 3 1 Hydrolytic ATP binding site of dynein motor region DHC_N2 PF08393.13 RKO94122.1 - 6.6e-133 443.7 8.3 6.6e-133 443.7 8.3 4.9 7 0 0 7 7 7 1 Dynein heavy chain, N-terminal region 2 AAA_8 PF12780.7 RKO94122.1 - 2.1e-98 328.8 0.0 1.3e-97 326.2 0.0 2.5 2 0 0 2 2 2 1 P-loop containing dynein motor region D4 Dynein_C PF18199.1 RKO94122.1 - 1.9e-82 276.9 2.6 8.2e-82 274.8 0.0 3.3 4 0 0 4 4 4 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 RKO94122.1 - 2e-82 275.6 0.3 2e-82 275.6 0.3 3.6 4 0 0 4 4 3 1 ATP-binding dynein motor region AAA_7 PF12775.7 RKO94122.1 - 1.4e-75 252.8 3.0 1.2e-69 233.4 0.0 4.1 4 0 0 4 4 3 2 P-loop containing dynein motor region AAA_lid_11 PF18198.1 RKO94122.1 - 6.8e-53 178.8 0.1 2.5e-52 177.0 0.1 2.1 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain MT PF12777.7 RKO94122.1 - 1.4e-52 178.9 14.1 2.5e-52 178.0 14.1 1.4 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Dynein_heavy PF03028.15 RKO94122.1 - 4.2e-45 152.7 0.0 1.9e-43 147.3 0.0 3.5 3 0 0 3 3 2 1 Dynein heavy chain region D6 P-loop domain AAA_5 PF07728.14 RKO94122.1 - 1.4e-28 99.6 4.1 1.4e-08 34.9 0.0 5.8 5 1 0 5 5 5 4 AAA domain (dynein-related subfamily) Dynein_AAA_lid PF17852.1 RKO94122.1 - 2.3e-24 85.9 3.6 3.6e-24 85.3 0.0 3.4 3 0 0 3 3 2 1 Dynein heavy chain AAA lid domain AAA_lid_1 PF17857.1 RKO94122.1 - 1.3e-17 63.9 0.7 1.1e-16 60.8 0.2 2.8 2 0 0 2 2 2 1 AAA+ lid domain AAA PF00004.29 RKO94122.1 - 4.1e-07 30.5 0.7 0.44 11.0 0.0 5.8 5 0 0 5 5 5 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 RKO94122.1 - 1.3e-06 28.9 8.6 0.29 11.5 0.0 6.8 6 0 0 6 6 5 1 AAA ATPase domain AAA_22 PF13401.6 RKO94122.1 - 5.2e-06 26.8 8.5 0.32 11.3 0.0 6.0 6 1 0 6 6 5 2 AAA domain AAA_18 PF13238.6 RKO94122.1 - 0.0003 21.3 0.0 1.5 9.4 0.0 4.7 3 0 0 3 3 3 1 AAA domain Rad17 PF03215.15 RKO94122.1 - 0.014 15.3 0.1 13 5.6 0.0 3.5 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_33 PF13671.6 RKO94122.1 - 0.045 13.9 1.3 20 5.3 0.0 3.7 4 0 0 4 4 3 0 AAA domain AAA_30 PF13604.6 RKO94122.1 - 0.047 13.4 8.5 0.23 11.1 0.1 3.6 4 0 0 4 4 4 0 AAA domain RNA_helicase PF00910.22 RKO94122.1 - 0.048 14.1 0.4 11 6.4 0.1 3.3 2 0 0 2 2 2 0 RNA helicase SCO1-SenC PF02630.14 RKO94122.1 - 0.1 12.5 0.0 0.33 10.8 0.0 1.8 1 0 0 1 1 1 0 SCO1/SenC RsgA_GTPase PF03193.16 RKO94122.1 - 0.58 10.1 5.0 0.3 11.0 0.1 2.9 3 0 0 3 3 2 0 RsgA GTPase DASH_Dad4 PF08650.10 RKO94122.1 - 1.6 8.7 10.9 0.4 10.7 0.9 3.9 3 0 0 3 3 2 0 DASH complex subunit Dad4 Aldo_ket_red PF00248.21 RKO94126.1 - 6.4e-50 170.0 0.0 7.1e-50 169.9 0.0 1.0 1 0 0 1 1 1 1 Aldo/keto reductase family F-box-like PF12937.7 RKO94132.1 - 0.056 13.4 1.4 0.8 9.7 1.4 2.5 1 1 0 1 1 1 0 F-box-like GatB_Yqey PF02637.18 RKO94135.1 - 0.0096 15.8 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 1 GatB domain NESP55 PF06390.12 RKO94137.1 - 0.079 12.5 2.1 0.1 12.2 2.1 1.1 1 0 0 1 1 1 0 Neuroendocrine-specific golgi protein P55 (NESP55) Cdh1_DBD_1 PF18196.1 RKO94138.1 - 0.033 14.5 0.2 0.085 13.2 0.2 1.6 1 0 0 1 1 1 0 Chromodomain helicase DNA-binding domain 1 RVT_2 PF07727.14 RKO94140.1 - 0.00033 20.4 0.7 0.0059 16.3 0.1 2.2 2 0 0 2 2 2 1 Reverse transcriptase (RNA-dependent DNA polymerase) DUF4745 PF15923.5 RKO94140.1 - 0.043 13.8 0.2 0.17 11.9 0.0 2.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4745) DUF4158 PF13700.6 RKO94140.1 - 0.17 11.7 0.0 0.27 11.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4158) DUF2420 PF10336.9 RKO94141.1 - 0.063 13.3 0.0 0.085 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2420) Linker_histone PF00538.19 RKO94142.1 - 1.1e-05 25.8 0.0 1.1e-05 25.8 0.0 2.8 3 0 0 3 3 3 1 linker histone H1 and H5 family Linker_histone PF00538.19 RKO94143.1 - 6.2e-26 90.6 0.3 6.2e-26 90.6 0.3 2.4 2 1 0 2 2 2 1 linker histone H1 and H5 family GREB1 PF15782.5 RKO94143.1 - 6.7 3.7 8.5 7.4 3.5 8.5 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer PQ-loop PF04193.14 RKO94144.1 - 0.038 13.8 0.1 0.075 12.8 0.1 1.5 1 0 0 1 1 1 0 PQ loop repeat SCAI PF12070.8 RKO94145.1 - 8.3e-195 648.7 1.0 9.9e-195 648.4 1.0 1.0 1 0 0 1 1 1 1 Protein SCAI DUF1645 PF07816.11 RKO94146.1 - 0.0051 17.4 3.0 0.0051 17.4 3.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1645) CCDC106 PF15794.5 RKO94146.1 - 1.6 8.4 5.3 2.6 7.7 0.6 2.2 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 106 SR-25 PF10500.9 RKO94146.1 - 2.2 7.8 18.4 2.5 7.6 1.7 2.1 2 0 0 2 2 2 0 Nuclear RNA-splicing-associated protein POT1PC PF16686.5 RKO94148.1 - 6.4e-21 74.9 0.0 1e-19 70.9 0.0 2.1 1 1 0 1 1 1 1 ssDNA-binding domain of telomere protection protein DUF4344 PF14247.6 RKO94148.1 - 0.044 13.4 0.1 0.08 12.6 0.0 1.4 2 0 0 2 2 2 0 Putative metallopeptidase CW_binding_2 PF04122.12 RKO94148.1 - 0.12 13.0 0.1 17 6.2 0.0 2.3 2 0 0 2 2 2 0 Putative cell wall binding repeat 2 AAA PF00004.29 RKO94149.1 - 7.5e-41 139.7 0.0 1.8e-40 138.4 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_ID_OB PF16450.5 RKO94149.1 - 9.4e-19 67.1 0.1 2.1e-18 66.0 0.1 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_lid_3 PF17862.1 RKO94149.1 - 9.6e-09 34.9 2.2 1.2e-08 34.6 0.2 2.2 2 0 0 2 2 2 1 AAA+ lid domain AAA_16 PF13191.6 RKO94149.1 - 1.8e-05 25.2 0.2 0.0088 16.4 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 RKO94149.1 - 5.1e-05 23.3 0.0 0.00025 21.0 0.0 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 RKO94149.1 - 6.2e-05 22.8 0.0 0.00016 21.4 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 RKO94149.1 - 0.00046 20.3 0.0 0.0017 18.5 0.0 2.0 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 RKO94149.1 - 0.0014 18.9 0.4 0.16 12.3 0.0 2.4 1 1 1 2 2 2 1 AAA domain PhoH PF02562.16 RKO94149.1 - 0.0039 16.7 0.0 0.05 13.1 0.0 2.3 2 0 0 2 2 2 1 PhoH-like protein DUF815 PF05673.13 RKO94149.1 - 0.0086 15.3 0.0 0.016 14.4 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) Mg_chelatase PF01078.21 RKO94149.1 - 0.011 15.1 0.0 0.036 13.5 0.0 1.8 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 RKO94149.1 - 0.017 15.3 0.0 0.041 14.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_11 PF13086.6 RKO94149.1 - 0.017 14.9 0.9 0.6 9.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 RKO94149.1 - 0.028 14.1 0.0 0.065 13.0 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_7 PF12775.7 RKO94149.1 - 0.046 13.2 0.0 0.11 12.0 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region AAA_24 PF13479.6 RKO94149.1 - 0.058 13.1 0.1 0.18 11.5 0.1 1.9 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 RKO94149.1 - 0.11 12.0 0.4 0.78 9.3 0.1 2.2 1 1 1 2 2 2 0 AAA domain CENP-F_leu_zip PF10473.9 RKO94149.1 - 0.14 12.2 6.0 0.31 11.0 6.0 1.5 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AAA_18 PF13238.6 RKO94149.1 - 0.16 12.5 0.6 1.3 9.6 0.0 2.7 3 2 1 4 4 3 0 AAA domain ABC_tran PF00005.27 RKO94149.1 - 0.16 12.5 0.2 3.8 8.0 0.0 2.4 2 0 0 2 2 2 0 ABC transporter F-box-like PF12937.7 RKO94150.1 - 0.0042 16.9 1.0 1.5 8.8 0.0 3.4 3 0 0 3 3 3 2 F-box-like DEAD PF00270.29 RKO94151.1 - 3e-42 144.3 0.0 4.6e-42 143.7 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 RKO94151.1 - 9e-19 67.9 0.0 1.2e-17 64.3 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DUF4217 PF13959.6 RKO94151.1 - 8.1e-18 64.4 0.7 8.1e-18 64.4 0.7 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4217) ResIII PF04851.15 RKO94151.1 - 7.6e-05 22.8 0.0 0.00013 22.0 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 RKO94151.1 - 0.038 14.3 0.3 0.33 11.2 0.3 2.3 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 RKO94151.1 - 0.057 13.1 0.0 0.38 10.5 0.0 2.1 1 1 0 1 1 1 0 AAA domain ERCC3_RAD25_C PF16203.5 RKO94151.1 - 0.15 11.2 0.0 0.34 10.1 0.0 1.5 2 0 0 2 2 2 0 ERCC3/RAD25/XPB C-terminal helicase Kinesin PF00225.23 RKO94152.1 - 9.5e-105 350.2 0.0 1.2e-104 349.9 0.0 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO94152.1 - 3.6e-22 78.9 0.0 5.5e-22 78.3 0.0 1.2 1 0 0 1 1 1 1 Microtubule binding Chromo PF00385.24 RKO94154.1 - 0.021 14.7 0.2 0.042 13.8 0.2 1.4 1 0 0 1 1 1 0 Chromo (CHRromatin Organisation MOdifier) domain CCDC85 PF10226.9 RKO94155.1 - 0.27 10.9 1.0 0.38 10.4 0.1 1.7 2 0 0 2 2 2 0 CCDC85 family JmjC PF02373.22 RKO94159.1 - 2.7e-44 150.2 0.5 6.2e-44 149.1 0.4 1.7 2 0 0 2 2 2 1 JmjC domain, hydroxylase JmjN PF02375.17 RKO94159.1 - 1.3e-07 31.5 0.1 3e-07 30.3 0.1 1.7 1 0 0 1 1 1 1 jmjN domain DUF4470 PF14737.6 RKO94160.1 - 8.8e-16 57.9 0.0 2e-15 56.7 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4470) ATP_bind_2 PF03668.15 RKO94160.1 - 0.17 11.2 0.0 0.36 10.1 0.0 1.4 1 0 0 1 1 1 0 P-loop ATPase protein family zf-MYND PF01753.18 RKO94160.1 - 4.5 7.4 5.9 9.4 6.4 5.9 1.5 1 0 0 1 1 1 0 MYND finger DUF4246 PF14033.6 RKO94161.1 - 9.2e-07 28.3 0.0 1e-05 24.9 0.0 1.9 2 0 0 2 2 2 2 Protein of unknown function (DUF4246) Myosin_head PF00063.21 RKO94162.1 - 8.9e-199 662.0 1.4 4.2e-176 587.1 1.2 2.2 1 1 1 2 2 2 2 Myosin head (motor domain) Myosin_TH1 PF06017.13 RKO94162.1 - 5.5e-31 107.7 0.9 9.4e-31 106.9 0.9 1.4 1 0 0 1 1 1 1 Unconventional myosin tail, actin- and lipid-binding SH3_1 PF00018.28 RKO94162.1 - 3e-10 39.5 0.0 1.8e-08 33.9 0.0 2.8 2 0 0 2 2 2 1 SH3 domain SH3_9 PF14604.6 RKO94162.1 - 1.8e-07 30.9 0.0 5.3e-07 29.4 0.0 1.8 1 0 0 1 1 1 1 Variant SH3 domain SH3_2 PF07653.17 RKO94162.1 - 6.6e-05 22.5 0.0 0.0002 21.0 0.0 1.8 1 0 0 1 1 1 1 Variant SH3 domain IQ PF00612.27 RKO94162.1 - 8.8e-05 22.0 0.4 0.00031 20.3 0.4 2.0 1 0 0 1 1 1 1 IQ calmodulin-binding motif SH3_3 PF08239.11 RKO94162.1 - 0.0015 18.8 0.1 0.0038 17.5 0.1 1.7 1 0 0 1 1 1 1 Bacterial SH3 domain TAF4 PF05236.14 RKO94163.1 - 7.1 6.3 7.9 9.9 5.8 7.9 1.2 1 0 0 1 1 1 0 Transcription initiation factor TFIID component TAF4 family zf-MYND PF01753.18 RKO94164.1 - 8.6e-07 29.0 9.1 8.6e-07 29.0 9.1 2.5 3 0 0 3 3 3 1 MYND finger Mal_decarbox_Al PF16957.5 RKO94168.1 - 0.27 9.5 0.0 0.38 9.0 0.0 1.1 1 0 0 1 1 1 0 Malonate decarboxylase, alpha subunit, transporter Hydrolase_4 PF12146.8 RKO94169.1 - 3e-08 33.2 0.0 4.2e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 RKO94169.1 - 8.6e-08 33.0 0.0 1.1e-07 32.7 0.0 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 RKO94169.1 - 5.1e-06 26.8 0.0 9.7e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 Thioesterase domain DUF2974 PF11187.8 RKO94169.1 - 2.9e-05 23.7 0.0 3.9e-05 23.3 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) PGAP1 PF07819.13 RKO94169.1 - 7.9e-05 22.5 0.1 0.0004 20.2 0.0 2.0 1 1 1 2 2 2 1 PGAP1-like protein DUF915 PF06028.11 RKO94169.1 - 0.00087 18.7 0.0 0.052 12.9 0.0 2.1 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF915) UPF0227 PF05728.12 RKO94169.1 - 0.0021 18.1 0.1 0.025 14.5 0.0 2.0 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0227) DUF676 PF05057.14 RKO94169.1 - 0.0034 16.9 0.0 0.046 13.2 0.0 2.2 1 1 0 1 1 1 1 Putative serine esterase (DUF676) LCAT PF02450.15 RKO94169.1 - 0.007 15.6 0.0 0.012 14.8 0.0 1.3 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase Palm_thioest PF02089.15 RKO94169.1 - 0.027 14.3 0.0 0.033 14.0 0.0 1.2 1 0 0 1 1 1 0 Palmitoyl protein thioesterase Lipase_3 PF01764.25 RKO94169.1 - 0.028 14.3 0.0 0.084 12.7 0.0 1.8 2 0 0 2 2 2 0 Lipase (class 3) Abhydrolase_1 PF00561.20 RKO94169.1 - 0.029 14.0 0.0 0.84 9.2 0.0 2.3 2 0 0 2 2 2 0 alpha/beta hydrolase fold LIDHydrolase PF10230.9 RKO94169.1 - 0.056 13.0 0.0 0.079 12.5 0.0 1.3 1 1 0 1 1 1 0 Lipid-droplet associated hydrolase HNH_2 PF13391.6 RKO94170.1 - 0.011 15.8 0.1 0.02 15.0 0.1 1.3 1 0 0 1 1 1 0 HNH endonuclease Filo_glycop PF01611.16 RKO94171.1 - 0.067 12.1 0.4 0.077 11.9 0.4 1.1 1 0 0 1 1 1 0 Filovirus glycoprotein FtsH_ext PF06480.15 RKO94172.1 - 0.51 10.7 2.6 5.2 7.5 1.4 2.6 1 1 1 2 2 2 0 FtsH Extracellular Rad52_Rad22 PF04098.15 RKO94176.1 - 3.6e-52 176.3 0.0 4.3e-52 176.1 0.0 1.1 1 0 0 1 1 1 1 Rad52/22 family double-strand break repair protein AAA_5 PF07728.14 RKO94177.1 - 1.9e-129 426.3 0.0 1.5e-22 80.1 0.0 9.6 9 0 0 9 9 9 9 AAA domain (dynein-related subfamily) AAA_lid_7 PF17867.1 RKO94177.1 - 3.7e-50 168.6 5.2 1.7e-17 63.5 0.0 6.9 7 0 0 7 7 6 3 Midasin AAA lid domain AAA_3 PF07726.11 RKO94177.1 - 3.7e-30 104.5 0.0 1.2e-10 41.4 0.0 7.5 7 0 0 7 7 7 3 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 RKO94177.1 - 2.2e-25 89.6 0.2 0.0029 18.0 0.0 7.1 6 1 0 6 6 6 5 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 RKO94177.1 - 2.8e-25 88.9 0.5 0.00035 20.1 0.0 6.6 6 0 0 6 6 6 5 P-loop containing dynein motor region AAA_lid_5 PF17865.1 RKO94177.1 - 4e-25 87.9 0.0 1.4e-24 86.2 0.0 2.1 1 0 0 1 1 1 1 Midasin AAA lid domain AAA_16 PF13191.6 RKO94177.1 - 8.3e-22 78.4 36.0 0.0015 19.0 3.2 9.9 6 3 1 7 7 7 6 AAA ATPase domain Dynein_heavy PF03028.15 RKO94177.1 - 8.5e-21 74.3 0.0 0.013 15.6 0.0 6.9 7 0 0 7 7 7 5 Dynein heavy chain region D6 P-loop domain AAA_22 PF13401.6 RKO94177.1 - 2.8e-17 63.3 0.7 0.022 15.1 0.0 7.0 6 0 0 6 6 6 3 AAA domain AAA_18 PF13238.6 RKO94177.1 - 2.1e-15 57.4 2.5 0.12 13.0 0.0 6.8 6 0 0 6 6 6 3 AAA domain AAA_6 PF12774.7 RKO94177.1 - 5.3e-14 51.9 0.1 0.2 10.6 0.0 8.1 8 1 0 8 8 7 2 Hydrolytic ATP binding site of dynein motor region Sigma54_activat PF00158.26 RKO94177.1 - 2e-13 50.4 0.0 0.28 10.9 0.0 6.1 7 0 0 7 7 6 4 Sigma-54 interaction domain AAA_30 PF13604.6 RKO94177.1 - 4.1e-13 49.5 4.8 0.019 14.7 0.3 7.9 7 1 0 7 7 7 2 AAA domain TsaE PF02367.17 RKO94177.1 - 4.6e-13 49.3 3.7 0.67 10.0 0.1 6.4 6 0 0 6 6 6 3 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 RKO94177.1 - 1.1e-12 48.6 0.4 0.17 12.4 0.0 7.0 8 0 0 8 8 6 2 ABC transporter Sigma54_activ_2 PF14532.6 RKO94177.1 - 3e-11 43.6 0.1 0.0011 19.0 0.0 5.0 4 0 0 4 4 4 2 Sigma-54 interaction domain AAA_14 PF13173.6 RKO94177.1 - 1.5e-10 41.3 0.0 0.017 15.1 0.0 7.1 8 0 0 8 8 6 2 AAA domain AAA_23 PF13476.6 RKO94177.1 - 1.2e-09 39.0 0.1 0.7 10.4 0.0 5.1 5 0 0 5 5 4 2 AAA domain AAA_33 PF13671.6 RKO94177.1 - 1.4e-09 38.3 0.4 5.9 7.0 0.0 6.9 6 0 0 6 6 6 0 AAA domain AAA_29 PF13555.6 RKO94177.1 - 1.9e-09 37.1 1.8 0.33 10.7 0.0 6.3 6 0 0 6 6 6 1 P-loop containing region of AAA domain RNA_helicase PF00910.22 RKO94177.1 - 3.5e-09 37.0 0.3 0.39 11.1 0.0 6.0 6 0 0 6 6 6 2 RNA helicase AAA_19 PF13245.6 RKO94177.1 - 7.4e-09 36.1 3.9 5.1 7.4 0.1 7.2 7 0 0 7 7 7 0 AAA domain RuvB_N PF05496.12 RKO94177.1 - 8.1e-09 35.4 1.8 0.39 10.4 0.0 7.1 7 0 0 7 7 7 1 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 RKO94177.1 - 2.7e-08 33.9 2.6 2.5 8.0 0.0 6.2 6 0 0 6 6 6 1 NACHT domain Zeta_toxin PF06414.12 RKO94177.1 - 4.6e-08 32.6 6.2 2.5 7.3 0.0 7.1 7 0 0 7 7 7 2 Zeta toxin Mg_chelatase PF01078.21 RKO94177.1 - 6.6e-08 32.2 7.1 5.8 6.2 0.0 9.0 8 1 1 9 9 9 0 Magnesium chelatase, subunit ChlI RsgA_GTPase PF03193.16 RKO94177.1 - 1.1e-07 31.9 0.8 1.8 8.4 0.0 5.8 6 0 0 6 6 6 1 RsgA GTPase AAA_28 PF13521.6 RKO94177.1 - 2.2e-07 31.3 14.8 2.7 8.2 0.0 7.1 7 0 0 7 7 6 1 AAA domain T2SSE PF00437.20 RKO94177.1 - 5.3e-07 29.0 0.5 1.3 8.0 0.0 6.2 6 0 0 6 6 6 1 Type II/IV secretion system protein AAA_25 PF13481.6 RKO94177.1 - 5.5e-07 29.4 11.6 0.13 11.8 0.1 6.3 6 0 0 6 6 5 2 AAA domain Rad17 PF03215.15 RKO94177.1 - 7.2e-07 29.3 0.6 0.57 10.1 0.0 5.2 6 0 0 6 6 5 1 Rad17 P-loop domain TniB PF05621.11 RKO94177.1 - 4.7e-06 26.1 0.0 2.3 7.6 0.0 5.4 6 0 0 6 6 5 1 Bacterial TniB protein DUF815 PF05673.13 RKO94177.1 - 6.4e-06 25.5 5.0 0.93 8.6 0.0 5.0 6 0 0 6 6 6 2 Protein of unknown function (DUF815) Roc PF08477.13 RKO94177.1 - 2.1e-05 24.7 1.1 9.5 6.5 0.1 5.9 6 0 0 6 6 6 0 Ras of Complex, Roc, domain of DAPkinase AAA_21 PF13304.6 RKO94177.1 - 4.2e-05 23.5 0.1 0.061 13.1 0.0 4.1 5 0 0 5 5 3 1 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 RKO94177.1 - 5.6e-05 23.2 0.2 26 4.9 0.1 5.5 6 0 0 6 6 5 0 50S ribosome-binding GTPase SRPRB PF09439.10 RKO94177.1 - 5.6e-05 22.7 0.3 0.87 9.0 0.0 4.9 5 0 0 5 5 5 1 Signal recognition particle receptor beta subunit PduV-EutP PF10662.9 RKO94177.1 - 8.4e-05 22.3 3.1 0.36 10.6 0.0 4.6 5 0 0 5 5 5 1 Ethanolamine utilisation - propanediol utilisation AAA_8 PF12780.7 RKO94177.1 - 0.00016 21.1 0.1 17 4.6 0.0 5.3 5 0 0 5 5 5 0 P-loop containing dynein motor region D4 AAA_24 PF13479.6 RKO94177.1 - 0.00019 21.2 0.9 36 4.0 0.0 5.5 6 0 0 6 6 5 0 AAA domain SRP54 PF00448.22 RKO94177.1 - 0.0002 21.0 1.9 2.4 7.8 0.0 3.9 4 0 0 4 4 3 1 SRP54-type protein, GTPase domain CPT PF07931.12 RKO94177.1 - 0.00096 19.0 2.0 17 5.2 0.0 6.5 6 1 0 6 6 6 0 Chloramphenicol phosphotransferase-like protein NTPase_1 PF03266.15 RKO94177.1 - 0.0067 16.4 5.1 23 4.9 0.0 5.4 6 0 0 6 6 5 0 NTPase ATPase_2 PF01637.18 RKO94177.1 - 0.0075 16.2 0.0 62 3.4 0.0 4.9 6 0 0 6 6 5 0 ATPase domain predominantly from Archaea AAA_2 PF07724.14 RKO94177.1 - 0.0077 16.4 0.0 24 5.0 0.0 5.0 5 0 0 5 5 4 0 AAA domain (Cdc48 subfamily) ResIII PF04851.15 RKO94177.1 - 0.016 15.3 0.0 12 5.9 0.0 3.7 4 0 0 4 4 4 0 Type III restriction enzyme, res subunit Cytidylate_kin PF02224.18 RKO94177.1 - 0.018 14.8 0.2 46 3.6 0.0 4.4 4 0 0 4 4 4 0 Cytidylate kinase cobW PF02492.19 RKO94177.1 - 0.045 13.4 4.4 25 4.4 0.0 5.3 6 0 0 6 6 6 0 CobW/HypB/UreG, nucleotide-binding domain dNK PF01712.19 RKO94177.1 - 0.095 12.5 1.9 48 3.7 0.0 4.5 5 0 0 5 5 5 0 Deoxynucleoside kinase PRK PF00485.18 RKO94177.1 - 0.12 12.1 0.3 16 5.1 0.0 3.4 3 0 0 3 3 3 0 Phosphoribulokinase / Uridine kinase family DEAD PF00270.29 RKO94177.1 - 0.12 12.1 0.9 67 3.2 0.1 4.0 4 1 0 4 4 3 0 DEAD/DEAH box helicase MCM PF00493.23 RKO94177.1 - 0.21 10.6 0.1 41 3.2 0.0 3.6 4 0 0 4 4 4 0 MCM P-loop domain AAA_17 PF13207.6 RKO94177.1 - 0.26 11.7 4.0 18 5.8 0.0 3.9 4 0 0 4 4 3 0 AAA domain ATP_bind_1 PF03029.17 RKO94177.1 - 4.5 7.0 6.7 37 4.0 0.0 4.5 6 0 0 6 6 5 0 Conserved hypothetical ATP binding protein AraC_binding PF02311.19 RKO94179.1 - 0.18 11.7 0.2 0.49 10.3 0.1 1.8 2 0 0 2 2 2 0 AraC-like ligand binding domain Nucleoside_tran PF01733.18 RKO94181.1 - 2e-41 142.4 0.0 2.6e-41 142.0 0.0 1.1 1 0 0 1 1 1 1 Nucleoside transporter DUF3176 PF11374.8 RKO94184.1 - 0.3 11.3 5.8 0.24 11.6 1.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3176) AbiEi_1 PF09407.10 RKO94187.1 - 0.012 16.0 0.0 0.022 15.1 0.0 1.4 1 0 0 1 1 1 0 AbiEi antitoxin C-terminal domain LRR_6 PF13516.6 RKO94187.1 - 0.14 12.3 0.0 6.8 7.0 0.0 3.4 3 0 0 3 3 3 0 Leucine Rich repeat Filament PF00038.21 RKO94189.1 - 0.00013 21.7 33.2 0.00013 21.7 33.2 19.5 2 2 11 16 16 16 4 Intermediate filament protein Pox_A_type_inc PF04508.12 RKO94189.1 - 0.078 12.9 0.1 0.078 12.9 0.1 12.7 14 0 0 14 14 14 0 Viral A-type inclusion protein repeat YojJ PF10372.9 RKO94189.1 - 3.3 7.9 8.3 1.6 8.9 0.0 5.2 4 1 2 6 6 6 0 Bacterial membrane-spanning protein N-terminus BLUF PF04940.12 RKO94189.1 - 5.1 7.3 6.2 31 4.8 0.5 3.5 2 0 0 2 2 2 0 Sensors of blue-light using FAD WD40_alt PF14077.6 RKO94189.1 - 9 6.3 16.1 5.2 7.0 0.2 6.1 5 0 0 5 5 5 0 Alternative WD40 repeat motif Malate_synthase PF01274.22 RKO94190.1 - 9.1e-220 730.4 0.0 1e-219 730.2 0.0 1.0 1 0 0 1 1 1 1 Malate synthase Thy1 PF02511.15 RKO94190.1 - 0.05 13.4 0.0 0.14 12.0 0.0 1.7 2 0 0 2 2 2 0 Thymidylate synthase complementing protein HTH_Tnp_1_2 PF13022.6 RKO94190.1 - 0.16 12.2 0.1 0.42 10.8 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix of insertion element transposase Kinesin PF00225.23 RKO94192.1 - 2.8e-61 207.3 0.2 3.4e-61 207.0 0.2 1.0 1 0 0 1 1 1 1 Kinesin motor domain Microtub_bd PF16796.5 RKO94192.1 - 9.3e-09 35.4 0.0 1.9e-08 34.4 0.0 1.5 1 0 0 1 1 1 1 Microtubule binding AAA_22 PF13401.6 RKO94192.1 - 0.017 15.4 0.0 0.039 14.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain Cluap1 PF10234.9 RKO94193.1 - 8.1e-15 54.9 3.2 1.5e-14 54.1 3.2 1.4 1 0 0 1 1 1 1 Clusterin-associated protein-1 PPP4R2 PF09184.11 RKO94193.1 - 0.0022 17.7 12.2 0.0027 17.3 12.2 1.1 1 0 0 1 1 1 1 PPP4R2 BUD22 PF09073.10 RKO94193.1 - 2.2 7.6 15.5 2.8 7.2 15.5 1.1 1 0 0 1 1 1 0 BUD22 Angiomotin_C PF12240.8 RKO94193.1 - 3 7.4 11.3 9.1 5.8 11.3 1.8 1 1 0 1 1 1 0 Angiomotin C terminal HrpJ PF07201.11 RKO94195.1 - 0.18 12.1 0.0 0.27 11.5 0.0 1.2 1 0 0 1 1 1 0 HrpJ-like domain TPR_16 PF13432.6 RKO94196.1 - 0.03 15.0 4.2 0.066 13.9 1.2 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO94196.1 - 1.3 10.0 6.0 6 8.0 0.0 3.3 2 1 1 3 3 3 0 Tetratricopeptide repeat DUF4880 PF16220.5 RKO94196.1 - 9.7 6.2 9.3 0.56 10.1 1.6 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4880) TPR_1 PF00515.28 RKO94197.1 - 4.8e-19 67.3 3.2 3.5e-05 23.4 0.1 5.9 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_16 PF13432.6 RKO94197.1 - 3.7e-14 53.1 21.2 1.6e-05 25.4 1.6 4.7 3 2 3 6 6 5 4 Tetratricopeptide repeat TPR_2 PF07719.17 RKO94197.1 - 5.5e-14 51.1 13.6 0.011 15.7 0.3 6.2 7 0 0 7 7 6 4 Tetratricopeptide repeat TPR_14 PF13428.6 RKO94197.1 - 1.5e-13 50.3 19.7 0.00087 19.9 0.0 7.0 2 1 6 8 8 7 6 Tetratricopeptide repeat TPR_17 PF13431.6 RKO94197.1 - 1.4e-12 47.1 7.7 0.00015 21.9 0.1 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.6 RKO94197.1 - 2.7e-12 46.2 6.6 0.00046 19.8 0.0 5.3 2 2 3 5 5 5 3 TPR repeat TPR_8 PF13181.6 RKO94197.1 - 3e-11 42.6 3.1 0.38 11.1 0.0 6.1 7 0 0 7 7 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 RKO94197.1 - 4.6e-10 39.9 11.2 1.6e-05 25.4 0.3 4.3 2 2 1 4 4 4 3 Tetratricopeptide repeat TPR_20 PF14561.6 RKO94197.1 - 1.6e-09 38.0 9.3 0.0015 18.8 0.1 4.4 2 2 2 4 4 4 4 Tetratricopeptide repeat TPR_7 PF13176.6 RKO94197.1 - 6.6e-07 28.9 6.3 0.12 12.4 0.4 5.1 5 0 0 5 5 5 2 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO94197.1 - 1.8e-06 28.1 2.6 7.5e-06 26.1 0.3 2.3 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.6 RKO94197.1 - 3.8e-06 27.0 9.5 0.021 15.0 0.3 4.2 3 1 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 RKO94197.1 - 0.00021 21.5 11.1 0.039 14.2 2.0 4.5 3 1 2 5 5 5 2 Tetratricopeptide repeat TPR_15 PF13429.6 RKO94197.1 - 0.00051 19.3 5.7 0.0063 15.8 0.1 2.6 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO94197.1 - 0.00066 20.2 7.4 5.5 7.9 0.3 5.8 6 0 0 6 6 6 1 Tetratricopeptide repeat DUF4880 PF16220.5 RKO94197.1 - 0.0054 16.6 2.9 0.0054 16.6 2.9 2.8 3 1 1 4 4 3 1 Domain of unknown function (DUF4880) TPR_4 PF07721.14 RKO94197.1 - 0.011 16.2 0.6 0.011 16.2 0.6 4.0 5 0 0 5 5 2 0 Tetratricopeptide repeat DUF1641 PF07849.11 RKO94197.1 - 0.086 12.7 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1641) OmdA PF13376.6 RKO94197.1 - 0.28 11.2 4.8 0.31 11.1 0.6 3.1 3 0 0 3 3 3 0 Bacteriocin-protection, YdeI or OmpD-Associated TPR_10 PF13374.6 RKO94197.1 - 1.4 8.9 12.0 1 9.3 0.9 4.4 5 0 0 5 5 5 0 Tetratricopeptide repeat TRAPP PF04051.16 RKO94198.1 - 7.9e-45 152.2 0.0 9e-45 152.0 0.0 1.0 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component Adaptin_binding PF10199.9 RKO94199.1 - 7.2e-11 42.8 0.7 6.4e-10 39.7 0.7 2.2 1 1 0 1 1 1 1 Alpha and gamma adaptin binding protein p34 Roc PF08477.13 RKO94199.1 - 0.0045 17.2 0.0 0.36 11.1 0.0 2.3 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 RKO94199.1 - 0.012 15.3 0.0 1.2 8.7 0.0 2.2 2 0 0 2 2 2 0 Ras family MMR_HSR1 PF01926.23 RKO94199.1 - 0.1 12.7 0.0 0.18 11.9 0.0 1.5 1 1 0 1 1 1 0 50S ribosome-binding GTPase Sin_N PF04801.13 RKO94200.1 - 2.5e-78 264.2 0.0 3.8e-78 263.6 0.0 1.1 1 0 0 1 1 1 1 Sin-like protein conserved region ADP_ribosyl_GH PF03747.14 RKO94210.1 - 3.4e-43 148.5 3.6 4.6e-43 148.0 3.6 1.1 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Gly-zipper_Omp PF13488.6 RKO94210.1 - 0.0025 17.8 3.2 0.98 9.5 0.2 2.4 2 0 0 2 2 2 2 Glycine zipper Gly-zipper_YMGG PF13441.6 RKO94210.1 - 0.6 9.9 10.2 1.5 8.6 1.2 2.5 2 0 0 2 2 2 0 YMGG-like Gly-zipper Rick_17kDa_Anti PF05433.15 RKO94210.1 - 1.3 8.9 12.5 0.65 9.9 3.4 2.5 2 0 0 2 2 2 0 Glycine zipper 2TM domain Beta_helix PF13229.6 RKO94211.1 - 5.4e-05 23.1 18.1 5.4e-05 23.1 18.1 2.0 2 1 0 2 2 2 1 Right handed beta helix region DNA_pol_B PF00136.21 RKO94213.1 - 1e-84 284.9 0.0 3.9e-83 279.7 0.0 2.1 1 1 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 RKO94213.1 - 3e-14 52.9 0.0 3.3e-11 42.9 0.0 2.3 2 0 0 2 2 2 2 DNA polymerase family B, exonuclease domain DNA_pol_B_2 PF03175.13 RKO94213.1 - 0.18 10.6 0.1 0.35 9.7 0.1 1.4 1 0 0 1 1 1 0 DNA polymerase type B, organellar and viral PB1 PF00564.24 RKO94217.1 - 0.0016 18.4 0.0 0.013 15.4 0.0 2.3 1 1 0 1 1 1 1 PB1 domain UBA PF00627.31 RKO94217.1 - 0.004 17.0 0.0 0.0099 15.8 0.0 1.7 1 0 0 1 1 1 1 UBA/TS-N domain TetR_C_27 PF17935.1 RKO94217.1 - 0.05 13.7 0.8 0.13 12.4 0.0 2.1 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain CHASE3 PF05227.13 RKO94217.1 - 0.06 13.3 0.4 0.06 13.3 0.4 2.3 2 0 0 2 2 2 0 CHASE3 domain CUE PF02845.16 RKO94217.1 - 0.089 12.5 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 CUE domain DUF883 PF05957.13 RKO94217.1 - 1.9 9.1 9.6 5.9 7.6 0.2 2.5 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) Apolipoprotein PF01442.18 RKO94217.1 - 2.5 8.0 12.9 28 4.5 13.0 2.2 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Phage_GPO PF05929.11 RKO94217.1 - 4.7 6.7 12.8 8.6 5.9 8.2 2.2 1 1 1 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase SKA1 PF07160.12 RKO94217.1 - 5.2 6.8 5.6 13 5.6 0.0 2.1 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 ERCC4 PF02732.15 RKO94222.1 - 7e-18 65.3 0.0 2.3e-17 63.6 0.0 1.8 2 0 0 2 2 2 1 ERCC4 domain Kelch_5 PF13854.6 RKO94223.1 - 6.5e-17 61.1 7.0 3.2e-05 23.8 0.0 6.3 6 0 0 6 6 6 5 Kelch motif Kelch_4 PF13418.6 RKO94223.1 - 3.6e-14 52.5 11.4 5.7e-08 32.6 0.2 4.8 5 0 0 5 5 5 2 Galactose oxidase, central domain Kelch_3 PF13415.6 RKO94223.1 - 3.6e-12 46.3 16.0 3.7e-07 30.3 1.5 4.2 4 0 0 4 4 4 3 Galactose oxidase, central domain Kelch_6 PF13964.6 RKO94223.1 - 2.2e-09 37.2 4.9 0.0017 18.6 0.1 4.2 4 1 0 4 4 4 2 Kelch motif Kelch_1 PF01344.25 RKO94223.1 - 1.2e-07 31.2 2.7 0.0097 15.5 0.1 3.5 3 0 0 3 3 3 2 Kelch motif Kelch_2 PF07646.15 RKO94223.1 - 0.086 12.8 6.1 0.22 11.6 0.1 4.0 5 0 0 5 5 5 0 Kelch motif EFF-AFF PF14884.6 RKO94226.1 - 0.052 11.7 0.0 0.064 11.4 0.0 1.1 1 0 0 1 1 1 0 Type I membrane glycoproteins cell-cell fusogen Ank_2 PF12796.7 RKO94227.1 - 6.7e-09 36.2 1.8 5.7e-05 23.6 0.1 1.9 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO94227.1 - 0.0024 18.4 0.3 0.069 13.8 0.3 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 RKO94227.1 - 0.0054 17.1 0.5 5.8 7.8 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 RKO94227.1 - 0.027 14.9 5.2 3.2 8.3 0.2 2.9 3 0 0 3 3 3 0 Ankyrin repeat Cyt-b5 PF00173.28 RKO94231.1 - 1.5e-05 25.0 0.0 2.9e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain DOMON PF03351.17 RKO94231.1 - 0.00028 21.1 0.0 0.00061 20.0 0.0 1.6 1 0 0 1 1 1 1 DOMON domain Cytochrom_B561 PF03188.16 RKO94231.1 - 0.00044 20.4 8.8 0.0016 18.6 8.5 2.1 1 1 0 1 1 1 1 Eukaryotic cytochrome b561 Pyrophosphatase PF00719.19 RKO94234.1 - 3.2e-58 196.1 0.2 4.4e-58 195.6 0.2 1.2 1 0 0 1 1 1 1 Inorganic pyrophosphatase Elongin_A PF06881.11 RKO94234.1 - 0.036 14.6 0.1 0.1 13.2 0.0 1.7 2 0 0 2 2 2 0 RNA polymerase II transcription factor SIII (Elongin) subunit A Bac_DnaA_C PF08299.11 RKO94236.1 - 0.025 14.6 5.4 1.4 9.0 0.7 3.9 4 0 0 4 4 4 0 Bacterial dnaA protein helix-turn-helix SWIB PF02201.18 RKO94239.1 - 0.088 12.7 0.0 89 3.1 0.0 3.5 4 0 0 4 4 4 0 SWIB/MDM2 domain Stap_Strp_tox_C PF02876.17 RKO94239.1 - 0.13 12.6 0.0 2.5e+02 2.0 0.0 3.8 4 0 0 4 4 4 0 Staphylococcal/Streptococcal toxin, beta-grasp domain AMP-binding PF00501.28 RKO94239.1 - 0.19 10.3 0.1 17 3.8 0.0 2.3 3 0 0 3 3 3 0 AMP-binding enzyme AAA_lid_7 PF17867.1 RKO94241.1 - 0.08 13.2 0.0 0.19 11.9 0.0 1.6 1 0 0 1 1 1 0 Midasin AAA lid domain AAA_6 PF12774.7 RKO94242.1 - 3.3e-155 516.0 0.0 4.8e-154 512.2 0.0 2.4 2 0 0 2 2 2 1 Hydrolytic ATP binding site of dynein motor region DHC_N2 PF08393.13 RKO94242.1 - 3.2e-137 457.9 6.1 3.2e-137 457.9 6.1 2.4 2 0 0 2 2 2 1 Dynein heavy chain, N-terminal region 2 Dynein_C PF18199.1 RKO94242.1 - 4e-113 377.7 0.0 4.9e-112 374.1 0.0 2.4 2 0 0 2 2 2 1 Dynein heavy chain C-terminal domain AAA_8 PF12780.7 RKO94242.1 - 2.1e-107 358.3 0.1 2.4e-106 354.8 0.0 2.5 2 0 0 2 2 2 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 RKO94242.1 - 1.5e-92 308.7 0.5 1.5e-92 308.7 0.5 2.5 2 0 0 2 2 1 1 ATP-binding dynein motor region AAA_7 PF12775.7 RKO94242.1 - 2.5e-84 281.3 0.3 3.1e-82 274.4 0.0 3.1 3 0 0 3 3 3 1 P-loop containing dynein motor region AAA_lid_11 PF18198.1 RKO94242.1 - 2.6e-57 193.2 0.0 8e-57 191.6 0.0 1.9 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain MT PF12777.7 RKO94242.1 - 1e-53 182.6 10.1 2.1e-53 181.6 10.1 1.5 1 0 0 1 1 1 1 Microtubule-binding stalk of dynein motor Dynein_heavy PF03028.15 RKO94242.1 - 3.3e-47 159.5 0.0 2.1e-44 150.4 0.0 3.3 3 0 0 3 3 2 1 Dynein heavy chain region D6 P-loop domain Dynein_AAA_lid PF17852.1 RKO94242.1 - 3.3e-34 117.8 0.0 1.4e-33 115.7 0.0 2.3 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_lid_1 PF17857.1 RKO94242.1 - 5.4e-18 65.0 0.0 2.9e-17 62.7 0.0 2.4 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 RKO94242.1 - 6.1e-16 58.7 0.0 0.0018 18.3 0.0 5.5 4 1 0 4 4 4 3 AAA domain (dynein-related subfamily) AAA PF00004.29 RKO94242.1 - 6.9e-08 33.0 0.2 0.031 14.7 0.0 4.8 5 0 0 5 5 4 2 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 RKO94242.1 - 0.00049 20.4 0.0 26 5.1 0.0 4.4 3 0 0 3 3 3 0 AAA domain Spc7 PF08317.11 RKO94242.1 - 0.00072 18.5 3.8 0.00072 18.5 3.8 2.9 2 0 0 2 2 2 1 Spc7 kinetochore protein T2SSE PF00437.20 RKO94242.1 - 0.0025 16.9 0.0 1.7 7.7 0.0 2.7 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_18 PF13238.6 RKO94242.1 - 0.0044 17.6 0.0 0.092 13.3 0.0 3.2 2 0 0 2 2 2 1 AAA domain Lipoprotein_7 PF01540.16 RKO94242.1 - 0.015 14.6 3.4 0.024 13.9 1.3 2.3 2 0 0 2 2 2 0 Adhesin lipoprotein AAA_16 PF13191.6 RKO94242.1 - 0.051 13.9 0.0 65 3.8 0.0 4.2 3 0 0 3 3 3 0 AAA ATPase domain Sigma54_activat PF00158.26 RKO94242.1 - 0.054 13.2 0.0 0.25 11.0 0.0 2.1 2 0 0 2 2 2 0 Sigma-54 interaction domain RNA_helicase PF00910.22 RKO94242.1 - 0.066 13.6 0.0 16 6.0 0.0 3.0 2 0 0 2 2 2 0 RNA helicase Mg_chelatase PF01078.21 RKO94242.1 - 0.069 12.5 0.0 28 4.0 0.0 3.4 4 0 0 4 4 4 0 Magnesium chelatase, subunit ChlI EF-hand_6 PF13405.6 RKO94242.1 - 0.077 13.0 0.1 0.45 10.6 0.1 2.4 1 0 0 1 1 1 0 EF-hand domain Laminin_II PF06009.12 RKO94242.1 - 0.27 11.2 13.0 0.015 15.3 1.1 3.5 3 0 0 3 3 3 0 Laminin Domain II EF-hand_7 PF13499.6 RKO94242.1 - 0.29 11.6 1.2 0.81 10.2 0.1 2.4 2 0 0 2 2 1 0 EF-hand domain pair KxDL PF10241.9 RKO94242.1 - 2.6 8.4 5.8 42 4.5 0.1 3.8 3 0 0 3 3 2 0 Uncharacterized conserved protein RPW8 PF05659.11 RKO94242.1 - 3.2 7.5 9.7 1.3 8.7 0.7 2.8 2 0 0 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 AAA_30 PF13604.6 RKO94242.1 - 5.5 6.7 7.5 4.1 7.1 0.3 3.3 4 0 0 4 4 3 0 AAA domain Tropomyosin_1 PF12718.7 RKO94242.1 - 9.9 6.3 11.1 0.51 10.5 3.8 2.7 2 0 0 2 2 1 0 Tropomyosin like PTPlike_phytase PF14566.6 RKO94243.1 - 5.4e-78 260.5 0.1 8.2e-42 143.0 0.1 2.3 2 0 0 2 2 2 2 Inositol hexakisphosphate DSPc PF00782.20 RKO94243.1 - 0.0015 18.3 0.0 0.012 15.4 0.0 2.3 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain Gcd10p PF04189.13 RKO94248.1 - 2.1e-72 243.8 0.5 2.9e-72 243.3 0.5 1.2 1 0 0 1 1 1 1 Gcd10p family Glyco_transf_17 PF04724.13 RKO94248.1 - 0.14 11.2 0.1 0.21 10.6 0.1 1.2 1 0 0 1 1 1 0 Glycosyltransferase family 17 DUF3318 PF11780.8 RKO94250.1 - 0.03 14.3 0.0 0.06 13.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3318) Med14 PF08638.11 RKO94250.1 - 0.092 12.2 0.5 0.18 11.2 0.5 1.5 1 0 0 1 1 1 0 Mediator complex subunit MED14 Pho86 PF11124.8 RKO94253.1 - 0.13 11.7 0.4 0.25 10.8 0.4 1.4 1 1 0 1 1 1 0 Inorganic phosphate transporter Pho86 VirE3 PF06661.11 RKO94259.1 - 0.043 13.1 0.0 0.052 12.8 0.0 1.1 1 0 0 1 1 1 0 VirE3 LapA_dom PF06305.11 RKO94260.1 - 0.24 11.3 0.6 0.4 10.5 0.6 1.2 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain TMEM154 PF15102.6 RKO94260.1 - 0.24 11.3 0.0 0.24 11.3 0.0 3.6 3 1 0 3 3 3 0 TMEM154 protein family zf-3CxxC_2 PF17180.4 RKO94267.1 - 0.17 12.6 2.9 0.29 11.9 2.9 1.3 1 0 0 1 1 1 0 Zinc-binding domain DHFR_1 PF00186.19 RKO94270.1 - 9.8e-32 109.9 0.0 1.1e-31 109.7 0.0 1.0 1 0 0 1 1 1 1 Dihydrofolate reductase Pkinase PF00069.25 RKO94271.1 - 3.2e-27 95.6 0.5 3.8e-27 95.3 0.5 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO94271.1 - 1.3e-12 47.6 0.2 1.8e-12 47.1 0.2 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 RKO94271.1 - 8.7e-08 31.3 0.0 1e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 RKO94271.1 - 0.03 13.6 0.0 0.14 11.5 0.0 1.9 2 0 0 2 2 2 0 Kinase-like Pox_VLTF3 PF04947.14 RKO94273.1 - 1.4e-23 83.4 8.6 1.4e-23 83.4 8.6 3.1 2 2 0 2 2 2 1 Poxvirus Late Transcription Factor VLTF3 like Ephrin_rec_like PF07699.13 RKO94273.1 - 0.0021 17.8 1.5 0.0042 16.8 1.5 1.4 1 0 0 1 1 1 1 Putative ephrin-receptor like TF_Zn_Ribbon PF08271.12 RKO94273.1 - 0.011 15.2 0.9 0.023 14.2 0.9 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding HypA PF01155.19 RKO94273.1 - 0.09 12.8 0.3 0.24 11.5 0.3 1.7 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF1877 PF08974.10 RKO94273.1 - 0.78 9.8 4.8 1 9.4 0.2 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF1877) Band_7 PF01145.25 RKO94274.1 - 2.7e-08 34.0 0.2 7.7e-08 32.5 0.1 1.9 1 1 0 1 1 1 1 SPFH domain / Band 7 family F-box-like PF12937.7 RKO94275.1 - 0.014 15.3 0.5 0.033 14.1 0.5 1.6 1 0 0 1 1 1 0 F-box-like RsdA_SigD_bd PF16751.5 RKO94275.1 - 0.048 13.9 0.1 0.18 12.1 0.1 2.0 1 0 0 1 1 1 0 Anti-sigma-D factor RsdA to sigma factor binding region PIF1 PF05970.14 RKO94286.1 - 0.021 14.0 0.1 0.027 13.6 0.1 1.2 1 0 0 1 1 1 0 PIF1-like helicase Arcadin_1 PF18653.1 RKO94286.1 - 0.084 12.9 0.0 0.092 12.8 0.0 1.1 1 0 0 1 1 1 0 Arcadin 1 MutS_I PF01624.20 RKO94287.1 - 6.2e-15 55.4 0.0 1e-14 54.7 0.0 1.3 1 0 0 1 1 1 1 MutS domain I TFIIIC_delta PF12657.7 RKO94288.1 - 0.026 14.5 0.1 0.059 13.3 0.1 1.5 1 0 0 1 1 1 0 Transcription factor IIIC subunit delta N-term Patatin PF01734.22 RKO94290.1 - 1.3e-08 35.3 0.0 1.9e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 Patatin-like phospholipase Apidaecin PF00807.17 RKO94292.1 - 0.03 14.4 0.6 0.08 13.1 0.6 1.6 1 0 0 1 1 1 0 Apidaecin AT_hook PF02178.19 RKO94292.1 - 0.055 13.4 1.9 0.17 11.9 1.9 1.9 1 0 0 1 1 1 0 AT hook motif YkuI_C PF10388.9 RKO94293.1 - 0.0085 15.9 1.4 0.018 14.9 0.2 2.1 1 1 0 2 2 2 1 EAL-domain associated signalling protein domain PDCD7 PF16021.5 RKO94293.1 - 0.048 12.8 10.2 0.063 12.4 10.2 1.1 1 0 0 1 1 1 0 Programmed cell death protein 7 PCNA_N PF00705.18 RKO94294.1 - 8.6e-17 61.0 1.1 8.6e-17 61.0 1.1 1.6 1 1 1 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 RKO94294.1 - 2.3e-13 50.4 0.2 5.5e-13 49.2 0.0 1.7 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 RKO94294.1 - 0.063 12.7 3.1 0.097 12.1 3.1 1.3 1 1 0 1 1 1 0 Rad9 End_beta_barrel PF12195.8 RKO94295.1 - 4.5 7.3 12.9 2.2 8.3 0.1 3.9 3 1 0 3 3 3 0 Beta barrel domain of bacteriophage endosialidase RT_RNaseH_2 PF17919.1 RKO94296.1 - 0.00077 19.5 0.0 0.34 11.0 0.0 2.4 2 0 0 2 2 2 2 RNase H-like domain found in reverse transcriptase RT_RNaseH PF17917.1 RKO94296.1 - 0.013 15.7 0.0 0.027 14.8 0.0 1.5 1 0 0 1 1 1 0 RNase H-like domain found in reverse transcriptase DUF4307 PF14155.6 RKO94299.1 - 0.061 13.2 0.0 0.088 12.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) DUF3342 PF11822.8 RKO94303.1 - 5.7e-19 68.1 0.2 1.1e-18 67.3 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3342) Peptidase_U49 PF10463.9 RKO94303.1 - 0.031 14.0 0.0 0.052 13.3 0.0 1.3 1 0 0 1 1 1 0 Peptidase U49 Pkinase PF00069.25 RKO94304.1 - 1.7e-09 37.5 0.0 3.1e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 RKO94304.1 - 0.044 13.1 0.0 0.084 12.2 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Mss4 PF04421.13 RKO94306.1 - 1.9e-17 63.2 0.0 3e-17 62.5 0.0 1.3 1 0 0 1 1 1 1 Mss4 protein Zn_Tnp_IS1 PF03811.13 RKO94306.1 - 0.055 13.2 0.9 0.055 13.2 0.9 1.9 2 0 0 2 2 2 0 InsA N-terminal domain DnaJ PF00226.31 RKO94307.1 - 1.7e-21 76.1 0.1 2.1e-21 75.8 0.1 1.1 1 0 0 1 1 1 1 DnaJ domain MULE PF10551.9 RKO94310.1 - 0.096 13.1 0.1 0.2 12.1 0.1 1.5 1 0 0 1 1 1 0 MULE transposase domain ArfGap PF01412.18 RKO94311.1 - 3.9e-30 104.3 1.0 4.1e-30 104.2 1.0 1.0 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf DUF3973 PF13119.6 RKO94311.1 - 0.058 13.5 1.1 0.14 12.3 0.0 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF3973) A2L_zn_ribbon PF08792.10 RKO94311.1 - 0.062 13.0 0.4 8.1 6.3 0.0 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain DUF4668 PF15701.5 RKO94311.1 - 0.07 13.0 0.0 0.07 13.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4668) ROS_MUCR PF05443.11 RKO94311.1 - 0.19 11.8 0.0 0.28 11.3 0.0 1.4 1 1 0 1 1 1 0 ROS/MUCR transcriptional regulator protein MULE PF10551.9 RKO94312.1 - 9e-07 29.2 0.3 6.6e-06 26.5 0.3 2.3 1 1 0 1 1 1 1 MULE transposase domain TPR_2 PF07719.17 RKO94314.1 - 4.6e-20 70.1 1.0 1.4e-05 24.8 0.1 6.0 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_1 PF00515.28 RKO94314.1 - 1.7e-19 68.7 2.0 2e-06 27.4 0.1 6.4 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_12 PF13424.6 RKO94314.1 - 3e-16 59.5 4.8 2.9e-07 30.7 0.0 5.1 5 1 1 6 6 5 3 Tetratricopeptide repeat TPR_16 PF13432.6 RKO94314.1 - 1.1e-15 58.0 0.0 1.2e-07 32.3 0.2 5.2 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 RKO94314.1 - 1.4e-13 49.9 2.8 0.043 14.0 0.1 6.5 6 0 0 6 6 6 4 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO94314.1 - 2.5e-12 46.8 0.3 3.1e-06 27.3 0.0 2.8 3 0 0 3 3 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 RKO94314.1 - 2.7e-10 40.6 4.8 0.0019 18.6 1.0 5.0 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_7 PF13176.6 RKO94314.1 - 3.1e-10 39.4 0.4 0.05 13.7 0.0 6.0 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_14 PF13428.6 RKO94314.1 - 2.6e-09 37.1 4.7 0.021 15.6 0.2 5.9 4 2 1 5 5 5 2 Tetratricopeptide repeat TPR_11 PF13414.6 RKO94314.1 - 1.8e-06 27.5 0.1 0.16 11.7 0.1 4.3 3 1 1 4 4 4 2 TPR repeat TPR_10 PF13374.6 RKO94314.1 - 7.6e-06 25.6 0.2 0.67 9.9 0.0 5.5 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_17 PF13431.6 RKO94314.1 - 0.0008 19.6 0.0 21 5.8 0.0 5.8 6 1 1 7 7 7 0 Tetratricopeptide repeat ChAPs PF09295.10 RKO94314.1 - 0.007 15.4 0.0 0.016 14.2 0.0 1.6 1 1 0 1 1 1 1 ChAPs (Chs5p-Arf1p-binding proteins) TPR_9 PF13371.6 RKO94314.1 - 0.013 15.6 3.5 0.75 10.0 0.0 4.1 4 1 1 5 5 5 0 Tetratricopeptide repeat SPO22 PF08631.10 RKO94314.1 - 0.021 14.3 0.0 0.056 12.9 0.0 1.7 1 0 0 1 1 1 0 Meiosis protein SPO22/ZIP4 like Amidohydro_2 PF04909.14 RKO94315.1 - 2.7e-58 198.1 0.0 3e-58 197.9 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase Whi5 PF08528.11 RKO94316.1 - 4.6e-11 42.1 0.0 6.9e-11 41.5 0.0 1.3 1 0 0 1 1 1 1 Whi5 like DUF1682 PF07946.14 RKO94318.1 - 1.9e-19 70.0 0.0 2.5e-19 69.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1682) DUF3149 PF11346.8 RKO94318.1 - 0.018 14.7 0.0 0.031 13.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) DUF1770 PF08589.10 RKO94318.1 - 0.083 13.9 0.0 0.12 13.4 0.0 1.2 1 0 0 1 1 1 0 Fungal protein of unknown function (DUF1770) Defensin_propep PF00879.18 RKO94318.1 - 0.15 12.3 0.1 0.28 11.5 0.1 1.4 1 0 0 1 1 1 0 Defensin propeptide GRP PF07172.11 RKO94318.1 - 0.19 12.4 0.0 0.43 11.3 0.0 1.6 1 0 0 1 1 1 0 Glycine rich protein family Metallophos PF00149.28 RKO94320.1 - 1.2e-32 114.1 0.6 1.8e-32 113.5 0.4 1.4 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 RKO94320.1 - 0.00093 19.6 0.1 0.0016 18.8 0.1 1.4 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain Glyco_hydro_65N PF03636.15 RKO94320.1 - 0.018 14.6 0.0 0.028 14.0 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, N-terminal domain RRM_1 PF00076.22 RKO94327.1 - 2.1e-28 97.9 0.0 4.5e-16 58.4 0.0 3.1 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 RKO94327.1 - 0.01 15.9 0.1 9.9 6.4 0.0 3.1 3 1 0 3 3 3 0 RNA recognition motif PIH1 PF08190.12 RKO94328.1 - 1.2e-33 116.0 0.0 1.8e-33 115.4 0.0 1.3 1 0 0 1 1 1 1 PIH1 N-terminal domain PIH1_CS PF18201.1 RKO94328.1 - 8.9e-12 45.3 0.0 1.6e-11 44.4 0.0 1.4 1 0 0 1 1 1 1 PIH1 CS-like domain Dsl1_C PF11989.8 RKO94328.1 - 0.21 11.3 0.0 0.33 10.6 0.0 1.2 1 0 0 1 1 1 0 Retrograde transport protein Dsl1 C terminal THEG4 PF15834.5 RKO94329.1 - 0.56 10.2 6.2 0.46 10.4 5.0 1.5 1 1 0 1 1 1 0 Testis highly expressed protein 4 E1-E2_ATPase PF00122.20 RKO94332.1 - 1.1e-07 31.6 0.7 1.9e-06 27.6 0.4 2.4 1 1 0 1 1 1 1 E1-E2 ATPase Hepsin-SRCR PF09272.10 RKO94335.1 - 0.062 13.8 0.0 0.13 12.8 0.0 1.5 1 0 0 1 1 1 0 Hepsin, SRCR domain RRM_1 PF00076.22 RKO94338.1 - 6.2e-11 42.0 0.0 6.8e-11 41.8 0.0 1.0 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LRR_6 PF13516.6 RKO94347.1 - 0.015 15.3 0.1 0.046 13.8 0.1 1.9 1 0 0 1 1 1 0 Leucine Rich repeat LPD22 PF18834.1 RKO94347.1 - 0.037 14.2 0.1 0.1 12.8 0.1 1.7 1 0 0 1 1 1 0 Large polyvalent protein associated domain 22 DEAD PF00270.29 RKO94350.1 - 1.1e-12 48.0 0.0 1.7e-12 47.4 0.0 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase RecQ_Zn_bind PF16124.5 RKO94350.1 - 1.8e-06 28.5 0.1 4.6e-06 27.3 0.1 1.7 1 0 0 1 1 1 1 RecQ zinc-binding ResIII PF04851.15 RKO94350.1 - 0.00024 21.1 0.0 0.00056 19.9 0.0 1.6 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 RKO94350.1 - 0.038 14.3 0.1 0.58 10.5 0.0 2.7 3 0 0 3 3 3 0 Helicase conserved C-terminal domain Helicase_C PF00271.31 RKO94352.1 - 0.016 15.6 0.0 0.03 14.6 0.0 1.5 1 0 0 1 1 1 0 Helicase conserved C-terminal domain Flavodoxin_1 PF00258.25 RKO94355.1 - 0.071 13.3 0.0 0.42 10.8 0.0 2.0 2 0 0 2 2 2 0 Flavodoxin CspB_prodomain PF18425.1 RKO94355.1 - 0.13 12.3 0.0 0.47 10.5 0.0 1.8 2 0 0 2 2 2 0 Csp protease B prodomain Sld3_N PF18523.1 RKO94357.1 - 0.12 12.5 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 Sld3 N-terminal domain Pre-PUA PF17832.1 RKO94360.1 - 0.063 14.0 2.4 9 7.1 0.1 3.4 3 0 0 3 3 3 0 Pre-PUA-like domain LprI PF07007.12 RKO94360.1 - 0.69 10.6 7.4 0.58 10.9 3.9 2.6 2 0 0 2 2 2 0 Lysozyme inhibitor LprI Cation_ATPase_C PF00689.21 RKO94361.1 - 5.8e-41 140.2 4.6 1.6e-40 138.8 4.6 1.8 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus E1-E2_ATPase PF00122.20 RKO94361.1 - 2.4e-36 125.0 1.0 2.4e-36 125.0 1.0 2.7 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase PF13246.6 RKO94361.1 - 6.8e-18 64.5 0.0 1.3e-17 63.7 0.0 1.4 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase PF00702.26 RKO94361.1 - 2.9e-14 53.9 1.0 2.5e-13 50.8 1.0 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 RKO94361.1 - 2.3e-05 24.0 2.8 0.00011 21.8 0.0 3.3 4 0 0 4 4 4 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 RKO94361.1 - 0.012 15.4 0.1 0.04 13.6 0.1 1.7 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase OppC_N PF12911.7 RKO94361.1 - 0.026 14.5 1.6 0.097 12.7 1.6 2.0 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C Virul_fac_BrkB PF03631.15 RKO94361.1 - 5 6.6 13.8 0.12 12.0 3.8 2.7 3 0 0 3 3 3 0 Virulence factor BrkB GREB1 PF15782.5 RKO94362.1 - 0.25 8.4 7.8 0.3 8.2 7.8 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer Adhesin_P1 PF03257.13 RKO94364.1 - 0.36 11.4 5.8 1.4 9.5 0.5 3.0 3 1 0 3 3 3 0 Mycoplasma adhesin P1 Iso_dh PF00180.20 RKO94367.1 - 7.9e-42 143.6 0.1 8.5e-42 143.5 0.1 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase PdxA PF04166.12 RKO94367.1 - 0.0082 15.6 0.1 0.0089 15.5 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal phosphate biosynthetic protein PdxA Citrate_synt PF00285.21 RKO94368.1 - 1.6e-105 353.2 0.0 1.9e-105 352.9 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Eclosion PF04736.12 RKO94368.1 - 0.22 11.2 0.0 0.42 10.3 0.0 1.4 1 0 0 1 1 1 0 Eclosion hormone NIF PF03031.18 RKO94369.1 - 1.1e-05 25.2 0.0 1.4e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase Pkinase PF00069.25 RKO94373.1 - 5.8e-47 160.3 0.0 7.2e-47 160.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO94373.1 - 1.4e-16 60.6 0.0 6.5e-16 58.4 0.0 1.8 2 0 0 2 2 2 1 Protein tyrosine kinase Abhydrolase_3 PF07859.13 RKO94375.1 - 2.2e-17 63.6 0.2 3.3e-17 63.1 0.2 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 RKO94375.1 - 1.3e-14 54.0 0.2 5.2e-14 52.0 0.2 1.7 1 1 0 1 1 1 1 Carboxylesterase family DHC_N1 PF08385.12 RKO94376.1 - 2.6e-163 544.7 9.1 2.6e-163 544.7 9.1 3.4 4 0 0 4 4 4 1 Dynein heavy chain, N-terminal region 1 AAA_6 PF12774.7 RKO94376.1 - 7.1e-147 488.6 0.0 8.9e-146 485.0 0.0 2.8 3 0 0 3 3 3 1 Hydrolytic ATP binding site of dynein motor region DHC_N2 PF08393.13 RKO94376.1 - 8.1e-122 407.1 10.2 8.1e-122 407.1 10.2 3.5 5 0 0 5 5 5 1 Dynein heavy chain, N-terminal region 2 Dynein_C PF18199.1 RKO94376.1 - 1.2e-98 330.2 0.0 1.2e-98 330.2 0.0 2.8 3 0 0 3 3 3 1 Dynein heavy chain C-terminal domain AAA_8 PF12780.7 RKO94376.1 - 1.4e-95 319.6 0.0 3.1e-95 318.4 0.0 1.7 1 0 0 1 1 1 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 RKO94376.1 - 3.1e-85 284.8 2.0 9.8e-85 283.1 1.3 2.4 2 0 0 2 2 2 1 ATP-binding dynein motor region AAA_7 PF12775.7 RKO94376.1 - 1.3e-70 236.6 0.8 2.2e-64 216.3 0.0 4.5 4 0 0 4 4 4 2 P-loop containing dynein motor region AAA_lid_11 PF18198.1 RKO94376.1 - 1.1e-54 184.7 0.0 3.5e-54 183.0 0.0 2.0 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Dynein_heavy PF03028.15 RKO94376.1 - 8.5e-41 138.8 0.1 4.4e-38 130.0 0.0 4.2 4 0 0 4 4 3 1 Dynein heavy chain region D6 P-loop domain MT PF12777.7 RKO94376.1 - 1.4e-34 119.7 8.5 1.4e-34 119.7 8.5 2.6 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_5 PF07728.14 RKO94376.1 - 1.6e-22 80.0 0.0 3.9e-07 30.2 0.0 5.3 4 1 0 4 4 4 3 AAA domain (dynein-related subfamily) AAA_lid_1 PF17857.1 RKO94376.1 - 5.8e-18 64.9 0.0 4.7e-17 62.0 0.0 2.6 2 0 0 2 2 1 1 AAA+ lid domain Dynein_AAA_lid PF17852.1 RKO94376.1 - 8.9e-14 51.7 0.0 5.2e-13 49.2 0.0 2.5 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA PF00004.29 RKO94376.1 - 4.3e-10 40.1 0.4 0.042 14.3 0.0 5.3 4 0 0 4 4 4 3 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 RKO94376.1 - 2.1e-09 38.0 0.4 0.028 14.8 0.0 5.2 4 1 0 4 4 4 2 AAA ATPase domain AAA_22 PF13401.6 RKO94376.1 - 8.1e-06 26.2 6.5 0.14 12.4 0.0 4.7 5 0 0 5 5 3 2 AAA domain AAA_18 PF13238.6 RKO94376.1 - 0.0012 19.4 0.1 6.8 7.2 0.0 4.5 4 0 0 4 4 3 0 AAA domain T2SSE PF00437.20 RKO94376.1 - 0.0017 17.5 0.2 0.21 10.6 0.0 3.2 3 0 0 3 3 3 1 Type II/IV secretion system protein AAA_11 PF13086.6 RKO94376.1 - 0.0023 17.8 6.8 1.7 8.4 0.0 5.4 5 0 0 5 5 5 2 AAA domain DUF244 PF03112.14 RKO94376.1 - 0.014 15.2 2.6 0.058 13.2 2.6 2.1 1 0 0 1 1 1 0 Uncharacterized protein family (ORF7) DUF TrwB_AAD_bind PF10412.9 RKO94376.1 - 0.022 13.7 0.2 0.089 11.7 0.1 2.0 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain FtsK_SpoIIIE PF01580.18 RKO94376.1 - 0.029 13.7 0.2 0.61 9.4 0.0 2.8 3 0 0 3 3 2 0 FtsK/SpoIIIE family AAA_33 PF13671.6 RKO94376.1 - 0.039 14.1 0.3 25 5.0 0.0 3.9 3 0 0 3 3 3 0 AAA domain Mg_chelatase PF01078.21 RKO94376.1 - 0.092 12.1 0.1 12 5.2 0.1 3.1 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 RKO94376.1 - 0.23 11.9 0.7 22 5.5 0.0 3.6 4 0 0 4 4 2 0 RNA helicase AAA_19 PF13245.6 RKO94376.1 - 0.24 11.7 13.6 2.3 8.6 0.1 5.0 5 0 0 5 5 5 0 AAA domain AAA_30 PF13604.6 RKO94376.1 - 7.5 6.2 19.8 6.4 6.5 0.0 5.2 6 0 0 6 6 5 0 AAA domain DUF2935 PF11155.8 RKO94376.1 - 9.3 6.6 8.0 7.8 6.9 0.2 4.1 4 0 0 4 4 2 0 Domain of unknown function (DUF2935) YihI PF04220.12 RKO94377.1 - 0.38 10.5 6.3 0.82 9.4 6.3 1.6 1 0 0 1 1 1 0 Der GTPase activator (YihI) DASH_Dad4 PF08650.10 RKO94381.1 - 0.0033 17.4 0.1 0.0056 16.6 0.1 1.5 1 1 0 1 1 1 1 DASH complex subunit Dad4 PARP_regulatory PF01358.18 RKO94381.1 - 0.12 11.3 0.1 0.14 11.1 0.1 1.1 1 0 0 1 1 1 0 Poly A polymerase regulatory subunit zf-CCCH_4 PF18044.1 RKO94382.1 - 0.94 9.4 0.0 0.94 9.4 0.0 2.4 3 0 0 3 3 3 0 CCCH-type zinc finger APC_r PF05923.12 RKO94383.1 - 0.0037 16.9 0.8 0.27 11.0 0.2 3.2 3 0 0 3 3 3 2 APC repeat PhoLip_ATPase_C PF16212.5 RKO94387.1 - 1.9e-72 244.0 18.3 1.9e-72 244.0 18.3 2.0 2 0 0 2 2 2 1 Phospholipid-translocating P-type ATPase C-terminal PhoLip_ATPase_N PF16209.5 RKO94387.1 - 1.1e-23 82.7 4.4 3.4e-23 81.1 4.4 1.9 1 0 0 1 1 1 1 Phospholipid-translocating ATPase N-terminal Cation_ATPase PF13246.6 RKO94387.1 - 4.7e-11 42.6 0.1 2.3e-10 40.4 0.0 2.2 3 0 0 3 3 3 1 Cation transport ATPase (P-type) Hydrolase PF00702.26 RKO94387.1 - 2.5e-09 37.8 0.7 0.00048 20.5 0.0 3.3 3 0 0 3 3 3 2 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 RKO94387.1 - 2.1e-08 33.9 0.0 8.1e-08 32.0 0.0 2.0 1 1 0 1 1 1 1 E1-E2 ATPase Hydrolase_3 PF08282.12 RKO94387.1 - 0.0032 17.2 0.3 0.012 15.4 0.1 1.9 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Ank_2 PF12796.7 RKO94388.1 - 5.1e-18 65.4 0.5 1.4e-12 48.0 0.2 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 RKO94388.1 - 1.5e-15 57.3 2.5 3.8e-10 40.1 0.4 2.5 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO94388.1 - 1.7e-15 56.9 2.1 1.6e-10 41.0 0.2 2.3 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 RKO94388.1 - 2.3e-13 49.9 0.5 0.00075 19.8 0.2 3.3 3 0 0 3 3 3 3 Ankyrin repeat Ank_3 PF13606.6 RKO94388.1 - 1.7e-10 40.2 0.7 0.0044 17.4 0.0 3.2 3 0 0 3 3 3 2 Ankyrin repeat Hydrolase PF00702.26 RKO94389.1 - 9e-05 22.9 0.0 0.00034 20.9 0.0 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase TFIIA PF03153.13 RKO94391.1 - 0.0093 16.0 8.7 0.0079 16.2 8.7 1.1 1 0 0 1 1 1 1 Transcription factor IIA, alpha/beta subunit PolyA_pol PF01743.20 RKO94391.1 - 0.022 15.2 0.0 0.022 15.2 0.0 2.3 2 1 0 2 2 2 0 Poly A polymerase head domain Flexi_CP PF00286.20 RKO94391.1 - 0.078 12.9 0.2 0.12 12.3 0.2 1.3 1 0 0 1 1 1 0 Viral coat protein Presenilin PF01080.17 RKO94391.1 - 0.2 10.4 4.3 0.21 10.3 4.3 1.1 1 0 0 1 1 1 0 Presenilin Spt20 PF12090.8 RKO94391.1 - 3.8 7.1 22.1 5.1 6.6 22.1 1.2 1 0 0 1 1 1 0 Spt20 family Peptidase_C1 PF00112.23 RKO94392.1 - 9.9e-11 42.1 1.4 3.7e-10 40.3 1.4 1.7 1 1 0 1 1 1 1 Papain family cysteine protease Peptidase_C39_2 PF13529.6 RKO94392.1 - 0.00067 20.2 0.1 0.00097 19.7 0.1 1.3 1 0 0 1 1 1 1 Peptidase_C39 like family BtrH_N PF14399.6 RKO94392.1 - 0.11 12.8 0.0 0.38 11.0 0.0 1.9 2 0 0 2 2 2 0 Butirosin biosynthesis protein H, N-terminal FAS_N PF17828.1 RKO94394.1 - 0.059 13.4 0.5 0.18 11.8 0.1 2.0 2 0 0 2 2 2 0 N-terminal domain in fatty acid synthase subunit beta POC3_POC4 PF10448.9 RKO94394.1 - 0.07 13.2 0.2 0.12 12.3 0.2 1.5 1 1 0 1 1 1 0 20S proteasome chaperone assembly proteins 3 and 4 SWIB PF02201.18 RKO94395.1 - 1.5e-12 47.2 0.1 1.1e-10 41.3 0.1 2.7 1 1 0 1 1 1 1 SWIB/MDM2 domain MutS_V PF00488.21 RKO94397.1 - 1.2e-39 136.3 0.0 2e-39 135.6 0.0 1.2 1 0 0 1 1 1 1 MutS domain V NOG1_N PF17835.1 RKO94397.1 - 0.028 14.4 0.0 0.083 12.8 0.0 1.8 1 0 0 1 1 1 0 NOG1 N-terminal helical domain HNH PF01844.23 RKO94397.1 - 0.03 14.5 5.7 0.095 12.9 5.7 2.0 1 1 0 1 1 1 0 HNH endonuclease MutS_III PF05192.18 RKO94397.1 - 0.069 13.4 0.2 0.84 9.8 0.1 2.4 2 1 0 3 3 3 0 MutS domain III RPA_interact_C PF14768.6 RKO94397.1 - 0.29 11.7 3.0 11 6.6 0.8 3.4 3 0 0 3 3 3 0 Replication protein A interacting C-terminal DUF5308 PF17233.2 RKO94400.1 - 0.0039 17.5 0.6 0.0064 16.7 0.6 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5308) adh_short PF00106.25 RKO94404.1 - 5.6e-28 97.7 0.0 3.6e-24 85.3 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 RKO94404.1 - 1.4e-16 60.8 0.0 4.2e-15 55.9 0.1 2.3 2 1 0 2 2 2 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 RKO94404.1 - 7.1e-11 42.3 0.0 1.4e-10 41.4 0.0 1.5 1 0 0 1 1 1 1 KR domain PYNP_C PF07831.13 RKO94405.1 - 0.15 11.7 0.2 0.33 10.6 0.2 1.5 1 0 0 1 1 1 0 Pyrimidine nucleoside phosphorylase C-terminal domain DUF2749 PF10907.8 RKO94408.1 - 0.025 14.8 0.3 0.061 13.5 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2749) Glycos_transf_2 PF00535.26 RKO94411.1 - 8e-11 42.0 0.0 1.5e-10 41.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 RKO94411.1 - 0.098 12.1 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase like family 2 LRR_4 PF12799.7 RKO94413.1 - 0.015 15.7 4.2 2.1 8.9 0.2 3.1 1 1 2 3 3 3 0 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 RKO94413.1 - 0.11 13.2 0.8 34 5.5 0.0 3.6 2 1 0 2 2 2 0 Leucine Rich Repeat STAS PF01740.21 RKO94419.1 - 0.028 14.1 0.1 0.17 11.6 0.0 2.2 3 0 0 3 3 3 0 STAS domain CNDH2_N PF06278.11 RKO94422.1 - 0.034 14.4 0.3 0.14 12.4 0.2 2.0 1 1 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, N-terminal SNARE PF05739.19 RKO94426.1 - 8e-15 54.6 0.4 1.6e-14 53.6 0.4 1.5 1 0 0 1 1 1 1 SNARE domain Syntaxin-5_N PF11416.8 RKO94426.1 - 2.1e-05 23.6 0.0 5.9e-05 22.2 0.0 1.8 1 0 0 1 1 1 1 Syntaxin-5 N-terminal, Sly1p-binding domain FlxA PF14282.6 RKO94426.1 - 0.018 15.0 0.2 0.018 15.0 0.2 2.9 3 0 0 3 3 3 0 FlxA-like protein Syntaxin-18_N PF10496.9 RKO94426.1 - 0.019 15.2 0.4 0.65 10.3 0.0 2.9 3 0 0 3 3 3 0 SNARE-complex protein Syntaxin-18 N-terminus Syntaxin PF00804.25 RKO94426.1 - 0.023 14.4 9.7 0.03 14.0 0.3 2.9 2 1 0 2 2 2 0 Syntaxin Syntaxin_2 PF14523.6 RKO94426.1 - 0.035 14.5 6.4 0.097 13.0 0.2 3.2 3 0 0 3 3 3 0 Syntaxin-like protein DUF1664 PF07889.12 RKO94426.1 - 0.17 12.0 11.0 1.8 8.6 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) DUF2383 PF09537.10 RKO94426.1 - 0.4 11.0 2.4 0.86 10.0 0.1 2.6 4 0 0 4 4 4 0 Domain of unknown function (DUF2383) Cluap1 PF10234.9 RKO94426.1 - 0.48 9.8 0.0 0.48 9.8 0.0 2.8 3 0 0 3 3 3 0 Clusterin-associated protein-1 UPF0242 PF06785.11 RKO94426.1 - 2.9 7.9 9.5 12 6.0 0.9 2.8 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Tup_N PF08581.10 RKO94426.1 - 3.3 8.1 10.8 0.91 9.9 0.7 3.4 4 0 0 4 4 4 0 Tup N-terminal SlyX PF04102.12 RKO94426.1 - 4.6 7.9 8.8 8.3 7.1 0.0 3.4 3 1 1 4 4 4 0 SlyX Gpr1_Fun34_YaaH PF01184.19 RKO94430.1 - 7.3e-36 123.7 7.3 8.3e-36 123.5 7.3 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family Response_reg PF00072.24 RKO94431.1 - 1.7e-16 60.4 0.0 1.9e-16 60.2 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain mRNA_cap_C PF03919.15 RKO94432.1 - 2.9e-11 44.0 0.1 7.6e-11 42.6 0.1 1.8 1 0 0 1 1 1 1 mRNA capping enzyme, C-terminal domain mRNA_cap_enzyme PF01331.19 RKO94432.1 - 4.7e-11 42.9 2.4 1.3e-10 41.4 0.9 2.4 2 1 0 2 2 2 1 mRNA capping enzyme, catalytic domain DNA_ligase_A_M PF01068.21 RKO94432.1 - 7.1e-05 22.5 1.3 0.14 11.7 0.3 3.3 2 1 1 3 3 3 2 ATP dependent DNA ligase domain DUF3694 PF12473.8 RKO94432.1 - 0.032 14.9 0.0 0.057 14.1 0.0 1.4 1 0 0 1 1 1 0 Kinesin protein SOG2 PF10428.9 RKO94433.1 - 5.2 6.1 15.3 7.1 5.7 15.3 1.1 1 0 0 1 1 1 0 RAM signalling pathway protein TFIIA PF03153.13 RKO94433.1 - 8.8 6.2 5.7 10 6.0 5.7 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit Bactofilin PF04519.13 RKO94435.1 - 0.0033 17.7 1.7 0.0033 17.7 1.7 5.5 6 0 0 6 6 6 2 Polymer-forming cytoskeletal Band_7 PF01145.25 RKO94436.1 - 6e-09 36.1 0.1 1.3e-08 35.1 0.0 1.7 1 1 0 1 1 1 1 SPFH domain / Band 7 family YgaB PF14182.6 RKO94436.1 - 0.49 10.8 8.5 6.2 7.3 1.5 3.4 1 1 2 3 3 3 0 YgaB-like protein Pox_VLTF3 PF04947.14 RKO94437.1 - 2.6e-19 69.6 3.8 2.6e-19 69.6 3.8 2.0 1 1 0 2 2 2 1 Poxvirus Late Transcription Factor VLTF3 like Fzo_mitofusin PF04799.13 RKO94437.1 - 0.11 12.0 1.2 3.1 7.3 0.8 2.3 2 0 0 2 2 2 0 fzo-like conserved region PRP3 PF08572.10 RKO94437.1 - 0.2 11.3 4.4 0.6 9.8 4.4 1.7 1 1 0 1 1 1 0 pre-mRNA processing factor 3 (PRP3) Integrase_H2C2 PF17921.1 RKO94438.1 - 5.6e-10 39.2 0.2 1.3e-09 38.0 0.2 1.6 1 0 0 1 1 1 1 Integrase zinc binding domain zf-H2C2 PF09337.10 RKO94438.1 - 0.032 14.5 0.1 0.064 13.5 0.1 1.5 1 0 0 1 1 1 0 H2C2 zinc finger Pkr1 PF08636.10 RKO94446.1 - 2.3e-18 66.1 0.8 2.5e-18 66.0 0.8 1.0 1 0 0 1 1 1 1 ER protein Pkr1 DUF2107 PF09880.9 RKO94446.1 - 0.0052 16.9 0.6 0.0065 16.6 0.6 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2107) ATG16 PF08614.11 RKO94448.1 - 1.2e-12 48.4 1.6 2.2e-12 47.6 1.6 1.4 1 1 0 1 1 1 1 Autophagy protein 16 (ATG16) CENP-F_leu_zip PF10473.9 RKO94448.1 - 0.031 14.3 5.2 0.12 12.4 0.4 2.1 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ESP PF16590.5 RKO94448.1 - 0.064 13.5 0.1 3.8 7.8 0.0 2.1 1 1 0 2 2 2 0 Exocrine gland-secreting peptide PDDEXK_2 PF12784.7 RKO94449.1 - 1.1e-15 57.9 0.0 1.4e-10 41.1 0.0 3.6 3 0 0 3 3 3 3 PD-(D/E)XK nuclease family transposase Ku_C PF03730.14 RKO94449.1 - 6.1e-14 52.5 0.9 1.3e-13 51.4 0.9 1.5 1 0 0 1 1 1 1 Ku70/Ku80 C-terminal arm Ank_2 PF12796.7 RKO94450.1 - 5.4e-07 30.1 0.0 4.7e-06 27.1 0.0 2.1 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank PF00023.30 RKO94450.1 - 9.5e-06 25.8 0.1 0.00033 21.0 0.0 2.9 3 0 0 3 3 3 1 Ankyrin repeat Ank_3 PF13606.6 RKO94450.1 - 3.2e-05 24.0 0.1 0.0023 18.3 0.0 3.1 3 0 0 3 3 3 1 Ankyrin repeat Ank_4 PF13637.6 RKO94450.1 - 0.0006 20.3 0.0 0.0013 19.3 0.0 1.5 1 0 0 1 1 1 1 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO94450.1 - 0.0022 18.3 0.0 0.013 15.8 0.0 2.2 2 0 0 2 2 2 1 Ankyrin repeats (many copies) RRM_1 PF00076.22 RKO94453.1 - 1.7e-15 56.6 0.0 2.6e-15 56.0 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 RKO94453.1 - 0.019 14.9 0.0 0.034 14.2 0.0 1.4 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif Skp1_POZ PF03931.15 RKO94455.1 - 0.057 13.6 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 Skp1 family, tetramerisation domain DUF4502 PF14950.6 RKO94464.1 - 0.068 12.6 7.2 0.09 12.2 4.5 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4502) AF-4 PF05110.13 RKO94465.1 - 0.017 13.3 9.4 0.017 13.2 9.4 1.1 1 0 0 1 1 1 0 AF-4 proto-oncoprotein Cwf_Cwc_15 PF04889.12 RKO94465.1 - 0.018 14.8 0.9 0.019 14.7 0.9 1.1 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein ASH PF15780.5 RKO94466.1 - 3.5e-07 30.3 0.4 0.00014 22.0 0.0 3.5 5 0 0 5 5 5 1 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Motile_Sperm PF00635.26 RKO94466.1 - 1.2e-05 25.1 0.1 0.0009 19.1 0.0 3.2 3 0 0 3 3 3 1 MSP (Major sperm protein) domain PapD-like PF14874.6 RKO94466.1 - 0.0011 19.1 0.1 13 6.0 0.0 3.9 3 1 0 3 3 3 2 Flagellar-associated PapD-like TMEM131_like PF12371.8 RKO94466.1 - 0.0076 16.5 0.9 1.4 9.2 0.0 3.9 4 1 0 4 4 4 1 Transmembrane protein 131-like Transglut_C PF00927.22 RKO94466.1 - 0.0099 16.0 0.0 0.21 11.7 0.0 2.7 2 0 0 2 2 2 1 Transglutaminase family, C-terminal ig like domain DUF5001 PF16392.5 RKO94466.1 - 0.023 14.6 0.0 0.064 13.2 0.0 1.8 1 0 0 1 1 1 0 Ig-like domain Hid1 PF12722.7 RKO94468.1 - 1.3e-23 83.2 0.2 1.5e-23 82.9 0.2 1.0 1 0 0 1 1 1 1 High-temperature-induced dauer-formation protein Dymeclin PF09742.9 RKO94468.1 - 8e-10 37.8 0.1 9.2e-10 37.6 0.1 1.0 1 0 0 1 1 1 1 Dyggve-Melchior-Clausen syndrome protein DUF1800 PF08811.11 RKO94468.1 - 0.037 13.1 0.1 0.041 12.9 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1800) DUF4852 PF16144.5 RKO94468.1 - 0.055 13.6 0.2 0.067 13.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4852) Arm PF00514.23 RKO94469.1 - 4e-57 188.6 19.6 0.00011 22.1 0.0 13.8 13 1 1 14 14 13 13 Armadillo/beta-catenin-like repeat HEAT_2 PF13646.6 RKO94469.1 - 6.1e-18 65.0 15.8 0.00085 19.7 1.0 7.9 2 2 4 7 7 7 6 HEAT repeats HEAT_EZ PF13513.6 RKO94469.1 - 8e-10 39.0 13.5 0.058 13.9 0.4 8.9 8 1 0 8 8 8 2 HEAT-like repeat HEAT PF02985.22 RKO94469.1 - 1.8e-07 30.8 13.3 2.6 8.6 0.2 8.2 9 0 0 9 9 8 1 HEAT repeat Arm_2 PF04826.13 RKO94469.1 - 3.6e-07 29.9 6.3 0.73 9.2 0.0 6.0 3 3 3 7 7 7 3 Armadillo-like KAP PF05804.12 RKO94469.1 - 5.8e-07 28.1 1.6 0.002 16.4 0.8 3.8 1 1 2 4 4 4 3 Kinesin-associated protein (KAP) V-ATPase_H_C PF11698.8 RKO94469.1 - 6.9e-07 29.4 6.5 0.27 11.4 0.0 6.3 2 2 6 8 8 8 2 V-ATPase subunit H Adaptin_N PF01602.20 RKO94469.1 - 3.6e-06 25.8 0.6 0.0065 15.1 0.2 3.1 2 1 0 2 2 2 2 Adaptin N terminal region Cnd1 PF12717.7 RKO94469.1 - 1.6e-05 25.0 9.3 0.024 14.7 0.2 4.6 4 2 2 6 6 6 2 non-SMC mitotic condensation complex subunit 1 UNC45-central PF11701.8 RKO94469.1 - 0.0019 18.2 3.9 7.4 6.5 0.5 4.7 2 2 0 3 3 3 1 Myosin-binding striated muscle assembly central DUF727 PF05303.12 RKO94469.1 - 0.0033 17.4 0.0 0.012 15.6 0.0 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF727) TAF6_C PF07571.13 RKO94469.1 - 0.025 14.9 0.1 0.11 12.8 0.1 2.1 1 0 0 1 1 1 0 TAF6 C-terminal HEAT repeat domain UPF0147 PF03685.13 RKO94469.1 - 0.044 13.8 0.3 24 5.1 0.0 3.3 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0147) CRF PF00473.17 RKO94469.1 - 0.066 13.3 0.1 0.16 12.0 0.1 1.7 1 0 0 1 1 1 0 Corticotropin-releasing factor family WAPL PF07814.13 RKO94469.1 - 0.098 11.4 3.0 9.3 4.9 0.1 3.5 3 1 0 3 3 3 0 Wings apart-like protein regulation of heterochromatin PBP1_TM PF14812.6 RKO94469.1 - 0.46 10.9 9.1 0.41 11.0 1.9 2.6 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal GCIP PF13324.6 RKO94469.1 - 3.1 7.3 6.1 0.26 10.9 0.1 2.2 3 0 0 3 3 3 0 Grap2 and cyclin-D-interacting BBS1 PF14779.6 RKO94470.1 - 1.2e-33 116.6 0.0 7e-26 91.2 0.0 2.4 1 1 1 2 2 2 2 Ciliary BBSome complex subunit 1 Actin PF00022.19 RKO94471.1 - 1.6e-62 211.4 0.0 2.9e-61 207.3 0.0 1.9 1 1 0 1 1 1 1 Actin CRIM PF16978.5 RKO94474.1 - 4.4e-44 150.0 0.0 1.2e-43 148.7 0.0 1.7 2 0 0 2 2 2 1 SAPK-interacting protein 1 (Sin1), middle CRIM domain SIN1_PH PF16979.5 RKO94474.1 - 1.4e-06 28.5 0.1 3.9e-06 27.1 0.1 1.8 1 0 0 1 1 1 1 SAPK-interacting protein 1 (Sin1), Pleckstrin-homology RBD PF02196.15 RKO94474.1 - 0.00058 19.9 0.1 0.0032 17.5 0.1 2.2 2 0 0 2 2 2 1 Raf-like Ras-binding domain TUG-UBL1 PF11470.8 RKO94474.1 - 0.082 13.1 0.1 0.2 11.9 0.1 1.6 1 0 0 1 1 1 0 TUG ubiquitin-like domain DUF4955 PF16315.5 RKO94474.1 - 0.099 12.8 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4955) Cobl PF09469.10 RKO94474.1 - 0.13 12.6 0.4 0.47 10.8 0.0 2.0 2 0 0 2 2 2 0 Cordon-bleu ubiquitin-like domain Guanylate_cyc PF00211.20 RKO94475.1 - 5.8e-51 172.7 0.5 4.2e-25 88.4 0.0 2.4 2 0 0 2 2 2 2 Adenylate and Guanylate cyclase catalytic domain DAGK_prokar PF01219.19 RKO94475.1 - 0.16 11.8 2.7 0.29 11.0 1.4 2.2 2 0 0 2 2 2 0 Prokaryotic diacylglycerol kinase Serinc PF03348.15 RKO94476.1 - 5.9e-28 98.0 5.6 1.5e-18 67.0 0.5 2.0 1 1 1 2 2 2 2 Serine incorporator (Serinc) Asp-B-Hydro_N PF05279.11 RKO94479.1 - 2 8.4 26.3 3.5 7.6 26.3 1.3 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region RR_TM4-6 PF06459.12 RKO94479.1 - 8.2 6.2 17.5 19 5.0 17.5 1.6 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 APH PF01636.23 RKO94482.1 - 0.00085 19.3 0.1 0.0012 18.8 0.1 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 RKO94482.1 - 0.0014 18.1 0.0 0.0021 17.5 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain ADP_ribosyl_GH PF03747.14 RKO94483.1 - 1.8e-08 34.5 2.5 8.4e-05 22.4 0.1 2.2 1 1 1 2 2 2 2 ADP-ribosylglycohydrolase Beta-prism_lec PF16458.5 RKO94483.1 - 0.071 13.1 0.5 0.19 11.7 0.5 1.7 1 0 0 1 1 1 0 Beta-prism lectin dTDP_sugar_isom PF00908.17 RKO94486.1 - 0.094 12.4 0.0 0.2 11.4 0.0 1.5 2 0 0 2 2 2 0 dTDP-4-dehydrorhamnose 3,5-epimerase Cytochrome_B PF00033.19 RKO94487.1 - 2.1e-56 190.7 12.9 2.5e-56 190.5 12.9 1.0 1 0 0 1 1 1 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 RKO94487.1 - 1.4e-21 77.2 7.0 1.4e-21 77.2 7.0 1.6 2 0 0 2 2 2 1 Cytochrome b(N-terminal)/b6/petB DUF4405 PF14358.6 RKO94487.1 - 1.3 9.6 17.1 0.56 10.8 7.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4405) PTPA PF03095.15 RKO94488.1 - 2.7e-73 247.1 0.0 5.3e-45 154.2 0.0 2.0 2 0 0 2 2 2 2 Phosphotyrosyl phosphate activator (PTPA) protein PAS_9 PF13426.7 RKO94489.1 - 5.8e-24 84.3 0.0 3.9e-15 56.0 0.0 3.2 3 0 0 3 3 3 3 PAS domain PAS_3 PF08447.12 RKO94489.1 - 1.3e-18 67.1 0.1 3.3e-08 33.7 0.0 4.0 3 1 0 3 3 3 3 PAS fold PAS PF00989.25 RKO94489.1 - 3.1e-14 53.0 0.0 0.0017 18.4 0.0 3.7 3 1 0 3 3 3 3 PAS fold PAS_4 PF08448.10 RKO94489.1 - 2.3e-09 37.5 0.0 0.12 12.6 0.0 3.6 3 1 0 3 3 3 3 PAS fold PAS_11 PF14598.6 RKO94489.1 - 0.00015 21.8 0.0 0.00056 20.0 0.0 1.9 2 0 0 2 2 2 1 PAS domain PAS_8 PF13188.7 RKO94489.1 - 0.03 14.4 0.0 0.2 11.7 0.0 2.2 2 0 0 2 2 2 0 PAS domain LRR_8 PF13855.6 RKO94492.1 - 2.6e-24 84.7 13.9 1.4e-08 34.4 0.2 3.8 3 1 1 4 4 4 3 Leucine rich repeat LRR_4 PF12799.7 RKO94492.1 - 6.4e-21 74.1 21.8 1e-05 25.7 3.4 4.8 3 1 1 4 4 4 4 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 RKO94492.1 - 6.3e-09 35.6 8.8 4.1e-06 26.4 1.7 2.1 1 1 1 2 2 2 2 Leucine-rich repeat LRR_1 PF00560.33 RKO94492.1 - 1.1e-06 28.4 18.4 2.6 8.9 0.2 8.2 8 1 1 9 9 9 1 Leucine Rich Repeat LRR_6 PF13516.6 RKO94492.1 - 0.00029 20.7 24.1 1.9 8.7 0.8 6.9 6 0 0 6 6 6 3 Leucine Rich repeat RsmF_methylt_CI PF17126.5 RKO94492.1 - 0.018 15.1 0.5 4.9 7.3 0.1 3.6 3 1 0 3 3 3 0 RsmF rRNA methyltransferase first C-terminal domain PARP_reg PF02877.14 RKO94492.1 - 0.028 14.5 0.3 0.063 13.4 0.1 1.7 2 0 0 2 2 2 0 Poly(ADP-ribose) polymerase, regulatory domain Enkurin PF13864.6 RKO94493.1 - 8.5e-17 61.4 0.0 1.6e-16 60.5 0.0 1.6 1 0 0 1 1 1 1 Calmodulin-binding Reeler PF02014.16 RKO94499.1 - 4.8e-06 27.4 0.1 8.8e-06 26.5 0.0 1.4 2 0 0 2 2 2 1 Reeler domain DUF1154 PF06631.11 RKO94500.1 - 0.011 15.7 1.0 0.011 15.7 1.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1154) PTH2 PF01981.16 RKO94501.1 - 0.11 12.8 0.1 0.15 12.3 0.1 1.4 1 0 0 1 1 1 0 Peptidyl-tRNA hydrolase PTH2 Ubiquitin_3 PF14836.6 RKO94502.1 - 0.12 12.4 0.0 0.2 11.7 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-like domain RNA_pol_Rpb5_C PF01191.19 RKO94503.1 - 1.2e-25 89.2 0.1 2.4e-25 88.2 0.1 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain RNA_pol_Rpb5_N PF03871.14 RKO94503.1 - 2.4e-15 56.9 0.9 5e-15 55.9 0.9 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb5, N-terminal domain Sec1 PF00995.23 RKO94506.1 - 1.7e-08 34.2 0.0 1.8e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 Sec1 family Retrotran_gag_2 PF14223.6 RKO94509.1 - 8.1e-09 35.3 0.0 1.8e-08 34.1 0.0 1.5 1 0 0 1 1 1 1 gag-polypeptide of LTR copia-type DUF4134 PF13572.6 RKO94509.1 - 4 7.8 7.6 0.27 11.5 1.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4134) Thymidylat_synt PF00303.19 RKO94510.1 - 3.5e-91 305.1 0.0 3.9e-91 304.9 0.0 1.0 1 0 0 1 1 1 1 Thymidylate synthase SLATT_4 PF18186.1 RKO94511.1 - 0.041 13.5 0.3 0.068 12.8 0.3 1.3 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 4 Ribonuc_red_sm PF00268.21 RKO94512.1 - 6e-105 350.7 3.0 7.1e-105 350.4 3.0 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain TTL PF03133.15 RKO94513.1 - 8.7e-19 67.7 0.5 3.5e-18 65.7 0.5 1.8 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family Filament PF00038.21 RKO94516.1 - 0.0099 15.5 0.5 0.018 14.6 0.3 1.4 2 0 0 2 2 2 1 Intermediate filament protein HR1 PF02185.16 RKO94516.1 - 0.016 15.3 0.9 0.031 14.4 0.9 1.5 1 0 0 1 1 1 0 Hr1 repeat Colipase PF01114.18 RKO94516.1 - 0.053 13.2 0.1 0.093 12.4 0.1 1.4 1 0 0 1 1 1 0 Colipase, N-terminal domain Glyco_hydro_18 PF00704.28 RKO94518.1 - 2.6e-62 211.3 0.2 3.4e-62 211.0 0.2 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 MRP-S32 PF10210.9 RKO94518.1 - 0.11 13.1 0.0 0.21 12.1 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S32 MTH865 PF07747.11 RKO94518.1 - 0.11 12.2 0.0 0.55 10.1 0.0 2.1 2 0 0 2 2 2 0 MTH865-like family BACK PF07707.15 RKO94519.1 - 0.078 13.1 1.6 3.1 7.9 0.0 3.7 3 2 0 3 3 3 0 BTB And C-terminal Kelch GlcNAc-1_reg PF18440.1 RKO94519.1 - 2 8.7 7.5 4.8 7.5 0.3 3.7 4 0 0 4 4 4 0 Putative GlcNAc-1 phosphotransferase regulatory domain Response_reg PF00072.24 RKO94520.1 - 1.4e-30 105.7 0.1 1.6e-30 105.6 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain End_tail_spike PF12219.8 RKO94521.1 - 0.00018 21.6 0.1 0.00018 21.6 0.1 5.5 4 1 0 5 5 5 1 Catalytic domain of bacteriophage endosialidase Peptidase_S74 PF13884.6 RKO94521.1 - 0.0002 21.6 0.0 0.00041 20.6 0.0 1.5 1 0 0 1 1 1 1 Chaperone of endosialidase DUF3883 PF13020.6 RKO94524.1 - 2.3e-10 40.4 0.1 1e-09 38.3 0.1 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF3883) Citrate_synt PF00285.21 RKO94525.1 - 5.7e-134 446.7 0.1 7.3e-134 446.4 0.1 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain DUF1717 PF05414.11 RKO94528.1 - 0.22 12.0 0.0 0.43 11.1 0.0 1.4 1 0 0 1 1 1 0 Viral domain of unknown function (DUF1717) RR_TM4-6 PF06459.12 RKO94529.1 - 1.1 9.0 7.1 1.7 8.4 7.1 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 RPA43_OB PF17875.1 RKO94529.1 - 3.6 8.2 5.5 6.3 7.4 5.5 1.4 1 0 0 1 1 1 0 RPA43 OB domain in RNA Pol I YdfA_immunity PF12127.8 RKO94529.1 - 4.6 6.2 4.4 4.6 6.2 3.6 1.4 1 1 0 1 1 1 0 SigmaW regulon antibacterial DUF748 PF05359.11 RKO94533.1 - 2.6 8.2 6.3 4.6 7.4 0.1 4.3 4 0 0 4 4 4 0 Domain of Unknown Function (DUF748) AAA_7 PF12775.7 RKO94533.1 - 3.5 7.1 6.3 1.8 8.1 0.3 3.4 3 1 1 4 4 4 0 P-loop containing dynein motor region RHSP PF07999.11 RKO94535.1 - 0.46 9.2 1.3 8.6 5.0 0.1 2.1 2 0 0 2 2 2 0 Retrotransposon hot spot protein AglB_L1 PF18079.1 RKO94537.1 - 0.016 15.5 1.1 0.1 12.9 0.1 2.4 1 1 2 3 3 3 0 Archaeal glycosylation protein B long peripheral domain F-box-like PF12937.7 RKO94538.1 - 0.011 15.6 0.2 0.038 13.9 0.2 2.0 1 0 0 1 1 1 0 F-box-like Ribosomal_L28 PF00830.19 RKO94538.1 - 0.23 11.7 0.3 23 5.3 0.3 2.3 2 0 0 2 2 2 0 Ribosomal L28 family eIF_4G1 PF12152.8 RKO94539.1 - 0.047 13.9 0.0 0.16 12.2 0.0 1.9 1 0 0 1 1 1 0 Eukaryotic translation initiation factor 4G1 NPV_P10 PF05531.12 RKO94539.1 - 0.073 13.5 0.0 0.2 12.2 0.0 1.7 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein CENP-Q PF13094.6 RKO94539.1 - 0.19 11.9 0.0 0.35 11.1 0.0 1.3 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit TPR_MLP1_2 PF07926.12 RKO94539.1 - 0.3 11.1 0.4 0.5 10.4 0.4 1.2 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein PAM2 PF07145.15 RKO94539.1 - 8.9 6.3 8.9 7.5 6.5 0.0 4.0 4 0 0 4 4 4 0 Ataxin-2 C-terminal region Myb_DNA-binding PF00249.31 RKO94540.1 - 7.9e-05 22.8 0.0 0.00016 21.8 0.0 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 RKO94540.1 - 0.029 14.6 0.1 0.16 12.2 0.0 2.1 2 0 0 2 2 2 0 Myb-like DNA-binding domain RabGAP-TBC PF00566.18 RKO94541.1 - 0.0051 16.5 0.0 0.0099 15.5 0.0 1.4 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Auxin_repressed PF05564.12 RKO94541.1 - 1.5 9.5 6.2 0.69 10.6 3.3 1.8 1 1 1 2 2 2 0 Dormancy/auxin associated protein PPP1R32 PF15691.5 RKO94542.1 - 5e-06 25.9 0.3 0.00023 20.4 0.0 2.1 2 0 0 2 2 2 2 Protein phosphatase 1 regulatory subunit 32 HIT PF01230.23 RKO94543.1 - 2.2e-19 70.0 0.2 2.9e-19 69.6 0.2 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 RKO94543.1 - 3.8e-08 33.8 0.8 1.6e-07 31.8 0.8 1.8 1 1 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 RKO94543.1 - 0.0067 16.3 0.3 0.013 15.4 0.3 1.5 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 WD40 PF00400.32 RKO94545.1 - 8e-14 51.8 4.9 0.0024 18.7 0.1 8.8 10 0 0 10 10 10 3 WD domain, G-beta repeat Arv1 PF04161.13 RKO94546.1 - 1.6e-43 149.3 1.1 1.1e-41 143.3 1.1 2.1 1 1 0 1 1 1 1 Arv1-like family Cytochrom_B561 PF03188.16 RKO94549.1 - 6.1e-06 26.4 1.5 1.5e-05 25.1 1.5 1.7 1 0 0 1 1 1 1 Eukaryotic cytochrome b561 CDH-cyt PF16010.5 RKO94549.1 - 0.027 14.2 0.1 0.043 13.5 0.1 1.3 1 0 0 1 1 1 0 Cytochrome domain of cellobiose dehydrogenase BTB PF00651.31 RKO94550.1 - 3.3e-05 24.1 0.0 0.00038 20.7 0.0 2.3 1 1 0 1 1 1 1 BTB/POZ domain SDA1 PF05285.12 RKO94552.1 - 0.0044 16.5 14.8 0.0076 15.7 14.8 1.3 1 0 0 1 1 1 1 SDA1 Nop14 PF04147.12 RKO94552.1 - 0.038 12.2 19.2 0.059 11.6 19.2 1.2 1 0 0 1 1 1 0 Nop14-like family BRK PF07533.16 RKO94552.1 - 0.087 12.5 0.1 0.23 11.1 0.0 1.8 2 0 0 2 2 1 0 BRK domain BUD22 PF09073.10 RKO94552.1 - 0.14 11.5 14.0 0.21 10.9 14.0 1.2 1 0 0 1 1 1 0 BUD22 NDC10_II PF16787.5 RKO94552.1 - 0.16 11.0 0.0 5.4 6.0 0.0 2.1 1 1 0 1 1 1 0 Centromere DNA-binding protein complex CBF3 subunit, domain 2 CDC45 PF02724.14 RKO94552.1 - 0.23 9.7 12.0 0.42 8.9 12.0 1.3 1 0 0 1 1 1 0 CDC45-like protein Sigma70_ner PF04546.13 RKO94552.1 - 0.32 10.9 11.6 0.66 9.8 11.6 1.6 1 0 0 1 1 1 0 Sigma-70, non-essential region DUF2151 PF10221.9 RKO94552.1 - 0.49 8.9 3.2 0.7 8.4 3.2 1.1 1 0 0 1 1 1 0 Cell cycle and development regulator YL1 PF05764.13 RKO94552.1 - 0.61 10.2 15.7 1.2 9.2 15.7 1.5 1 0 0 1 1 1 0 YL1 nuclear protein Mpp10 PF04006.12 RKO94552.1 - 0.77 8.1 17.6 1.1 7.7 17.6 1.1 1 0 0 1 1 1 0 Mpp10 protein RNA_pol_3_Rpc31 PF11705.8 RKO94552.1 - 1.1 9.5 17.3 2 8.6 17.3 1.4 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 RR_TM4-6 PF06459.12 RKO94552.1 - 2 8.2 7.8 3.5 7.4 7.8 1.3 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 PI3K_1B_p101 PF10486.9 RKO94552.1 - 2.8 5.6 6.3 4.1 5.1 6.3 1.1 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit PPP4R2 PF09184.11 RKO94552.1 - 3 7.4 12.5 4.4 6.8 12.5 1.3 1 0 0 1 1 1 0 PPP4R2 TFIIA PF03153.13 RKO94552.1 - 6.8 6.6 14.6 14 5.6 14.6 1.4 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit DNA_pol_phi PF04931.13 RKO94552.1 - 7.2 4.6 29.9 12 3.9 29.9 1.2 1 0 0 1 1 1 0 DNA polymerase phi TFIIF_alpha PF05793.12 RKO94552.1 - 8.1 4.9 22.4 12 4.3 22.4 1.2 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Merozoite_SPAM PF07133.11 RKO94552.1 - 9.2 6.2 31.3 22 5.0 31.3 1.5 1 0 0 1 1 1 0 Merozoite surface protein (SPAM) LcrG PF07216.12 RKO94555.1 - 0.025 14.5 0.0 0.046 13.6 0.0 1.5 1 0 0 1 1 1 0 LcrG protein Peptidase_M41 PF01434.18 RKO94555.1 - 0.06 13.2 0.7 0.73 9.6 0.1 2.0 1 1 1 2 2 2 0 Peptidase family M41 Myosin_head PF00063.21 RKO94560.1 - 1.3e-238 793.7 0.0 1.5e-238 793.5 0.0 1.0 1 0 0 1 1 1 1 Myosin head (motor domain) AAA_16 PF13191.6 RKO94560.1 - 0.0036 17.7 0.0 0.0084 16.5 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 RKO94560.1 - 0.038 14.3 0.0 0.088 13.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 RKO94560.1 - 0.04 13.2 0.0 0.069 12.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_19 PF13245.6 RKO94560.1 - 0.058 13.7 0.0 0.12 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 RKO94560.1 - 0.093 13.2 0.0 0.2 12.1 0.0 1.6 1 0 0 1 1 1 0 ABC transporter TsaE PF02367.17 RKO94560.1 - 0.1 12.6 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE IstB_IS21_ATP PF08483.11 RKO94564.1 - 0.073 13.0 0.9 3.9 7.5 0.1 2.5 2 0 0 2 2 2 0 IstB-like ATP binding N-terminal SUR7 PF06687.12 RKO94565.1 - 5.3e-05 23.0 11.0 0.00014 21.6 11.0 1.7 1 1 0 1 1 1 1 SUR7/PalI family DUF308 PF03729.13 RKO94565.1 - 1.2 9.5 17.7 0.12 12.7 2.0 3.3 3 0 0 3 3 3 0 Short repeat of unknown function (DUF308) Amastin PF07344.11 RKO94565.1 - 2.1 8.2 8.3 24 4.7 5.9 2.2 2 0 0 2 2 2 0 Amastin surface glycoprotein Tetraspanin PF00335.20 RKO94565.1 - 3.8 7.2 7.7 2.3 7.9 3.9 2.1 2 0 0 2 2 2 0 Tetraspanin family zf-C3HC4_4 PF15227.6 RKO94568.1 - 2.5e-06 27.5 8.2 2.5e-06 27.5 8.2 2.2 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-C3HC4_2 PF13923.6 RKO94568.1 - 4.8e-06 26.3 9.4 3.9e-05 23.4 6.3 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 RKO94568.1 - 6.9e-06 25.8 7.0 6.9e-06 25.8 7.0 2.5 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 RKO94568.1 - 1.7e-05 24.7 7.7 4.1e-05 23.5 7.7 1.7 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_2 PF13639.6 RKO94568.1 - 4.9e-05 23.6 11.6 4.9e-05 23.6 11.6 2.1 2 1 0 2 2 2 1 Ring finger domain zf-RING_5 PF14634.6 RKO94568.1 - 0.0051 16.7 7.7 0.0051 16.7 7.7 2.1 2 0 0 2 2 2 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 RKO94568.1 - 3.2 7.7 21.0 0.33 10.9 12.7 2.8 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_10 PF16685.5 RKO94568.1 - 6.8 6.9 9.6 1 9.5 4.2 2.2 2 0 0 2 2 2 0 zinc RING finger of MSL2 SWIB PF02201.18 RKO94570.1 - 1.2e-13 50.8 0.1 1.3e-11 44.2 0.1 2.5 1 1 0 1 1 1 1 SWIB/MDM2 domain TFIIA PF03153.13 RKO94571.1 - 0.0057 16.7 11.0 0.0074 16.3 11.0 1.2 1 0 0 1 1 1 1 Transcription factor IIA, alpha/beta subunit Presenilin PF01080.17 RKO94571.1 - 3.7 6.2 5.1 4.6 5.9 5.1 1.3 1 0 0 1 1 1 0 Presenilin MutS_V PF00488.21 RKO94572.1 - 1.8e-40 139.0 0.0 2.6e-40 138.5 0.0 1.1 1 0 0 1 1 1 1 MutS domain V ATPase_2 PF01637.18 RKO94572.1 - 0.096 12.6 0.0 1.2 9.0 0.0 2.3 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Myc_N PF01056.18 RKO94574.1 - 0.029 14.3 0.4 0.031 14.2 0.4 1.0 1 0 0 1 1 1 0 Myc amino-terminal region DUF4611 PF15387.6 RKO94574.1 - 0.16 12.2 3.9 0.2 11.9 3.2 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4611) TFIIE-A_C PF11521.8 RKO94574.1 - 0.17 12.2 1.6 0.29 11.5 1.6 1.4 1 0 0 1 1 1 0 C-terminal general transcription factor TFIIE alpha DUF3258 PF11646.8 RKO94575.1 - 0.28 11.3 3.9 0.49 10.6 3.0 1.9 2 1 0 2 2 2 0 Protein of unknown function DUF3258 Cytomega_UL20A PF05984.12 RKO94576.1 - 0.062 13.6 1.5 0.11 12.8 0.4 2.0 2 0 0 2 2 2 0 Cytomegalovirus UL20A protein ATPgrasp_N PF18130.1 RKO94576.1 - 0.095 13.3 0.0 0.22 12.1 0.0 1.6 1 0 0 1 1 1 0 ATP-grasp N-terminal domain PDCD7 PF16021.5 RKO94577.1 - 0.0034 16.5 6.5 0.005 16.0 6.5 1.1 1 0 0 1 1 1 1 Programmed cell death protein 7 PCNA_N PF00705.18 RKO94579.1 - 5.8e-17 61.6 0.5 1.3e-16 60.5 0.5 1.6 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 RKO94579.1 - 5.4e-14 52.5 0.1 1.3e-13 51.3 0.1 1.6 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, C-terminal domain L_protein_N PF15518.6 RKO94579.1 - 0.033 14.0 0.0 0.077 12.8 0.0 1.6 1 0 0 1 1 1 0 L protein N-terminus End_beta_barrel PF12195.8 RKO94580.1 - 0.027 14.4 0.4 0.027 14.4 0.4 3.7 3 0 0 3 3 3 0 Beta barrel domain of bacteriophage endosialidase E1_FCCH PF16190.5 RKO94580.1 - 0.028 14.6 1.8 1 9.6 0.1 3.0 2 0 0 2 2 2 0 Ubiquitin-activating enzyme E1 FCCH domain IQ PF00612.27 RKO94582.1 - 9.5e-13 46.7 56.3 0.0051 16.5 0.6 8.7 8 0 0 8 8 8 7 IQ calmodulin-binding motif TMF_DNA_bd PF12329.8 RKO94584.1 - 0.0076 16.2 0.9 0.0076 16.2 0.9 8.7 4 2 5 11 11 11 4 TATA element modulatory factor 1 DNA binding DHC_N1 PF08385.12 RKO94585.1 - 1.5e-174 581.8 9.8 7.6e-174 579.4 0.1 3.4 3 0 0 3 3 3 2 Dynein heavy chain, N-terminal region 1 MT PF12777.7 RKO94585.1 - 6.8e-158 525.2 15.3 6.8e-158 525.2 15.3 2.1 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_6 PF12774.7 RKO94585.1 - 3.6e-155 515.9 0.1 2.5e-152 506.5 0.0 3.1 3 0 0 3 3 3 1 Hydrolytic ATP binding site of dynein motor region DHC_N2 PF08393.13 RKO94585.1 - 3.4e-129 431.4 7.1 3.4e-129 431.4 7.1 3.7 5 0 0 5 5 3 1 Dynein heavy chain, N-terminal region 2 AAA_8 PF12780.7 RKO94585.1 - 3.8e-100 334.5 0.1 3e-99 331.5 0.0 2.5 3 0 0 3 3 2 1 P-loop containing dynein motor region D4 Dynein_C PF18199.1 RKO94585.1 - 2.1e-97 326.0 0.3 2.1e-97 326.0 0.3 2.9 4 0 0 4 4 3 1 Dynein heavy chain C-terminal domain AAA_9 PF12781.7 RKO94585.1 - 3e-84 281.6 0.4 9.6e-84 279.9 0.4 2.0 1 0 0 1 1 1 1 ATP-binding dynein motor region AAA_7 PF12775.7 RKO94585.1 - 1.5e-71 239.6 0.0 1e-64 217.4 0.0 3.7 3 0 0 3 3 3 3 P-loop containing dynein motor region AAA_lid_11 PF18198.1 RKO94585.1 - 1.2e-54 184.5 0.1 1.5e-52 177.7 0.0 2.6 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain AAA_lid_1 PF17857.1 RKO94585.1 - 3.3e-40 136.3 0.4 1.2e-39 134.5 0.4 2.1 1 0 0 1 1 1 1 AAA+ lid domain Dynein_heavy PF03028.15 RKO94585.1 - 9e-40 135.5 0.1 5.9e-38 129.6 0.0 3.5 3 0 0 3 3 3 1 Dynein heavy chain region D6 P-loop domain AAA_5 PF07728.14 RKO94585.1 - 7.2e-26 90.8 0.0 2.8e-13 50.0 0.0 6.2 6 1 0 6 6 6 4 AAA domain (dynein-related subfamily) Dynein_AAA_lid PF17852.1 RKO94585.1 - 2.8e-23 82.4 1.5 1.2e-22 80.4 1.5 2.2 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_16 PF13191.6 RKO94585.1 - 8.3e-09 36.1 0.0 0.052 13.9 0.0 5.4 4 0 0 4 4 4 2 AAA ATPase domain AAA PF00004.29 RKO94585.1 - 1.1e-06 29.1 0.6 0.26 11.7 0.0 5.0 4 0 0 4 4 4 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 RKO94585.1 - 1.2e-06 28.8 0.1 2.8 8.2 0.0 5.2 4 0 0 4 4 4 1 AAA domain AAA_30 PF13604.6 RKO94585.1 - 5.4e-05 23.0 0.2 2.9 7.5 0.0 4.3 4 0 0 4 4 4 1 AAA domain ABC_tran PF00005.27 RKO94585.1 - 0.00029 21.4 0.1 1.6 9.3 0.0 4.5 3 0 0 3 3 3 1 ABC transporter Sigma54_activat PF00158.26 RKO94585.1 - 0.0031 17.2 0.0 6.8 6.4 0.0 3.4 3 0 0 3 3 3 0 Sigma-54 interaction domain AAA_19 PF13245.6 RKO94585.1 - 0.0031 17.8 0.5 38 4.6 0.0 4.5 4 0 0 4 4 4 0 AAA domain AAA_18 PF13238.6 RKO94585.1 - 0.0048 17.5 0.3 2.9 8.4 0.0 4.5 4 0 0 4 4 4 1 AAA domain AAA_14 PF13173.6 RKO94585.1 - 0.012 15.6 0.0 5.4 7.1 0.0 4.5 4 0 0 4 4 4 0 AAA domain RNA_helicase PF00910.22 RKO94585.1 - 0.017 15.5 0.0 70 3.9 0.0 3.8 3 0 0 3 3 3 0 RNA helicase Sigma54_activ_2 PF14532.6 RKO94585.1 - 0.03 14.4 0.0 4.6 7.4 0.0 3.1 2 0 0 2 2 2 0 Sigma-54 interaction domain ATP-synt_ab PF00006.25 RKO94585.1 - 0.036 13.7 0.0 2.1 7.9 0.0 3.0 2 1 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain CbiA PF01656.23 RKO94585.1 - 0.058 13.4 0.1 3.6 7.7 0.0 3.6 3 0 0 3 3 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain Mg_chelatase PF01078.21 RKO94585.1 - 0.072 12.5 0.1 23 4.3 0.0 3.8 4 0 0 4 4 4 0 Magnesium chelatase, subunit ChlI TsaE PF02367.17 RKO94585.1 - 0.11 12.6 0.3 14 5.7 0.0 3.6 3 0 0 3 3 3 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rad17 PF03215.15 RKO94585.1 - 0.14 12.1 0.7 22 4.9 0.0 4.1 4 0 0 4 4 4 0 Rad17 P-loop domain Syntaxin-6_N PF09177.11 RKO94585.1 - 0.27 11.8 19.0 13 6.4 0.1 7.1 5 1 0 5 5 4 0 Syntaxin 6, N-terminal NACHT PF05729.12 RKO94585.1 - 0.51 10.2 0.0 0.51 10.2 0.0 3.6 5 0 0 5 5 4 0 NACHT domain Mannitol_dh PF01232.23 RKO94585.1 - 1.6 8.9 4.7 1.8 8.7 1.3 2.9 2 0 0 2 2 2 0 Mannitol dehydrogenase Rossmann domain TEX12 PF15219.6 RKO94585.1 - 6.8 7.1 6.3 3.4 8.1 0.1 3.6 4 0 0 4 4 2 0 Testis-expressed 12 LRR_8 PF13855.6 RKO94586.1 - 3.3e-49 164.5 56.2 1.9e-10 40.4 1.3 8.4 4 3 5 9 9 9 9 Leucine rich repeat LRR_4 PF12799.7 RKO94586.1 - 6.9e-41 137.6 70.5 1.1e-05 25.7 0.6 11.0 1 1 14 16 16 16 16 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 RKO94586.1 - 1.4e-13 49.3 54.8 0.35 11.6 0.3 15.9 16 0 0 16 16 16 5 Leucine Rich Repeat LRR_6 PF13516.6 RKO94586.1 - 1e-05 25.2 57.5 0.52 10.5 0.2 14.2 14 0 0 14 14 14 3 Leucine Rich repeat LRR_9 PF14580.6 RKO94586.1 - 0.00019 21.0 34.8 0.0014 18.1 2.3 5.6 1 1 5 7 7 7 6 Leucine-rich repeat DUF3475 PF11961.8 RKO94586.1 - 0.013 15.6 0.2 0.12 12.5 0.0 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF3475) DUF2322 PF10084.9 RKO94586.1 - 2.3 8.3 4.4 1e+02 3.0 0.0 4.8 6 1 1 7 7 7 0 Uncharacterized protein conserved in bacteria (DUF2322) Choline_transpo PF04515.12 RKO94587.1 - 6.8e-83 278.6 30.8 6.8e-83 278.6 30.8 3.8 3 2 0 3 3 3 1 Plasma-membrane choline transporter Calici_coat PF00915.20 RKO94588.1 - 0.058 12.3 0.1 0.064 12.1 0.1 1.1 1 0 0 1 1 1 0 Calicivirus coat protein ADP_ribosyl_GH PF03747.14 RKO94589.1 - 6.9e-18 65.4 0.1 1.7e-08 34.5 0.0 2.0 1 1 0 2 2 2 2 ADP-ribosylglycohydrolase Chlam_OMP PF01308.17 RKO94592.1 - 0.095 11.4 0.0 0.11 11.2 0.0 1.0 1 0 0 1 1 1 0 Chlamydia major outer membrane protein RVT_1 PF00078.27 RKO94609.1 - 0.0084 15.7 0.0 0.0088 15.6 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) RNA_pol_Rpb5_C PF01191.19 RKO94615.1 - 4.1e-09 36.2 0.0 7.4e-09 35.4 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain Citrate_bind PF16114.5 RKO94616.1 - 2.6e-92 307.2 0.1 6.4e-91 302.7 0.0 2.1 2 0 0 2 2 2 1 ATP citrate lyase citrate-binding ATP-grasp_2 PF08442.10 RKO94616.1 - 1.9e-07 30.9 0.0 2.7e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain FBPase PF00316.20 RKO94617.1 - 1.6e-68 229.9 0.1 2.1e-68 229.6 0.1 1.1 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain Inositol_P PF00459.25 RKO94617.1 - 0.0048 16.4 0.1 0.011 15.2 0.0 1.6 2 0 0 2 2 2 1 Inositol monophosphatase family Citrate_synt PF00285.21 RKO94623.1 - 1.6e-19 70.3 0.1 1.6e-16 60.3 0.0 3.0 1 1 1 2 2 2 2 Citrate synthase, C-terminal domain Ligase_CoA PF00549.19 RKO94623.1 - 3e-16 59.6 0.1 6.9e-16 58.4 0.1 1.6 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 RKO94623.1 - 2.1e-07 30.8 0.0 4.3e-07 29.8 0.0 1.5 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain NODP PF07684.12 RKO94626.1 - 0.096 12.9 0.3 0.23 11.6 0.0 1.7 2 0 0 2 2 2 0 NOTCH protein Tox-SGS PF15651.6 RKO94631.1 - 0.047 13.9 0.0 0.069 13.4 0.0 1.2 1 0 0 1 1 1 0 Salivary glad secreted protein domain toxin RsbU_N PF08673.10 RKO94633.1 - 0.18 11.9 0.4 1.6 8.9 0.2 2.4 2 0 0 2 2 2 0 Phosphoserine phosphatase RsbU, N-terminal domain PNTB PF02233.16 RKO94636.1 - 0.15 11.0 0.0 0.21 10.5 0.0 1.1 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit DUF4295 PF14128.6 RKO94636.1 - 0.19 11.6 0.1 2.6 7.9 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4295) COX3 PF00510.18 RKO94637.1 - 3.2e-91 305.7 27.3 3.6e-91 305.6 27.3 1.0 1 0 0 1 1 1 1 Cytochrome c oxidase subunit III AtuA PF07287.11 RKO94638.1 - 0.17 10.6 0.0 0.24 10.0 0.0 1.1 1 0 0 1 1 1 0 Acyclic terpene utilisation family protein AtuA TPR_1 PF00515.28 RKO94640.1 - 9.9e-21 72.6 3.1 0.011 15.6 0.1 8.8 9 0 0 9 9 9 4 Tetratricopeptide repeat TPR_2 PF07719.17 RKO94640.1 - 7.6e-19 66.3 20.2 0.0047 16.9 0.0 10.4 10 1 0 10 10 9 4 Tetratricopeptide repeat TPR_14 PF13428.6 RKO94640.1 - 7.9e-14 51.2 26.2 0.014 16.2 3.8 8.3 8 1 1 9 9 8 4 Tetratricopeptide repeat TPR_11 PF13414.6 RKO94640.1 - 1.1e-13 50.6 0.7 0.022 14.4 0.0 5.6 5 0 0 5 5 5 3 TPR repeat TPR_8 PF13181.6 RKO94640.1 - 1.1e-11 43.9 10.5 0.18 12.1 0.1 7.6 7 1 1 8 8 8 3 Tetratricopeptide repeat TPR_16 PF13432.6 RKO94640.1 - 1.6e-10 41.5 26.9 0.064 13.9 3.1 8.3 7 2 3 10 10 9 3 Tetratricopeptide repeat TPR_19 PF14559.6 RKO94640.1 - 5e-09 36.5 17.8 0.012 16.1 2.2 7.0 6 1 0 7 7 7 2 Tetratricopeptide repeat TPR_7 PF13176.6 RKO94640.1 - 1.4e-07 31.0 7.2 0.015 15.3 0.0 6.4 6 0 0 6 6 5 2 Tetratricopeptide repeat ANAPC3 PF12895.7 RKO94640.1 - 2.7e-06 27.5 17.5 2e-05 24.7 2.7 4.7 5 0 0 5 5 4 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_12 PF13424.6 RKO94640.1 - 5.6e-05 23.3 21.4 0.33 11.3 0.1 7.4 5 2 2 7 7 7 2 Tetratricopeptide repeat TPR_17 PF13431.6 RKO94640.1 - 0.00056 20.1 3.2 7.9 7.1 0.0 6.0 7 0 0 7 7 6 1 Tetratricopeptide repeat TPR_6 PF13174.6 RKO94640.1 - 0.0036 17.8 15.2 5.7 7.8 0.0 7.8 9 0 0 9 9 9 1 Tetratricopeptide repeat TPR_21 PF09976.9 RKO94640.1 - 0.013 15.3 0.8 0.013 15.3 0.8 3.1 5 0 0 5 5 5 0 Tetratricopeptide repeat-like domain ChAPs PF09295.10 RKO94640.1 - 0.026 13.5 0.2 0.25 10.3 0.0 2.5 3 0 0 3 3 3 0 ChAPs (Chs5p-Arf1p-binding proteins) TPR_10 PF13374.6 RKO94640.1 - 0.03 14.2 3.3 2.1 8.3 0.0 5.0 6 0 0 6 6 6 0 Tetratricopeptide repeat DUF5525 PF17663.1 RKO94640.1 - 0.031 12.4 0.0 0.044 11.9 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5525) TPR_9 PF13371.6 RKO94640.1 - 1.6 8.9 12.9 31 4.8 0.2 5.3 6 0 0 6 6 6 0 Tetratricopeptide repeat TRIQK PF15168.6 RKO94641.1 - 0.0071 16.2 0.4 0.018 14.9 0.0 1.8 2 0 0 2 2 2 1 Triple QxxK/R motif-containing protein family NlpE_C PF17185.4 RKO94643.1 - 0.088 13.1 0.0 0.22 11.8 0.0 1.6 1 0 0 1 1 1 0 NlpE C-terminal OB domain RGS PF00615.19 RKO94646.1 - 1.6e-15 57.4 0.2 9.8e-15 54.9 0.1 2.2 2 0 0 2 2 2 1 Regulator of G protein signaling domain RGS-like PF09128.11 RKO94646.1 - 0.019 14.7 2.3 0.021 14.6 0.0 2.2 3 0 0 3 3 3 0 Regulator of G protein signalling-like domain UMP1 PF05348.11 RKO94646.1 - 0.24 11.7 4.3 0.31 11.3 0.2 2.9 2 1 1 3 3 3 0 Proteasome maturation factor UMP1 DIRP PF06584.13 RKO94646.1 - 2.4 8.4 10.2 0.97 9.6 0.8 3.7 4 0 0 4 4 4 0 DIRP RGS PF00615.19 RKO94647.1 - 1.4e-19 70.5 0.6 1.4e-18 67.3 0.1 2.4 2 0 0 2 2 2 1 Regulator of G protein signaling domain MMS19_C PF12460.8 RKO94648.1 - 5.1e-82 276.3 0.0 7.8e-81 272.4 0.0 2.4 2 1 0 2 2 2 1 RNAPII transcription regulator C-terminal MMS19_N PF14500.6 RKO94648.1 - 7.8e-79 264.9 2.8 1.4e-74 251.0 0.1 4.0 3 1 0 3 3 3 2 Dos2-interacting transcription regulator of RNA-Pol-II HEAT_EZ PF13513.6 RKO94648.1 - 1.7e-07 31.6 3.5 0.14 12.7 0.0 5.9 3 1 2 5 5 5 3 HEAT-like repeat HEAT_2 PF13646.6 RKO94648.1 - 0.00052 20.3 4.3 0.38 11.2 0.3 4.6 3 1 1 4 4 4 2 HEAT repeats ParcG PF10274.9 RKO94648.1 - 0.015 15.4 0.5 0.041 14.0 0.5 1.7 1 0 0 1 1 1 0 Parkin co-regulated protein RTP1_C1 PF10363.9 RKO94648.1 - 0.016 15.4 0.2 11 6.3 0.0 3.3 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 HEAT PF02985.22 RKO94648.1 - 0.032 14.5 3.5 16 6.1 0.1 5.7 5 0 0 5 5 5 0 HEAT repeat CLASP_N PF12348.8 RKO94648.1 - 0.11 12.1 0.1 1.1 8.8 0.0 2.7 3 0 0 3 3 3 0 CLASP N terminal DUF1910 PF08928.10 RKO94648.1 - 0.13 12.3 0.0 0.29 11.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1910) THF_DHG_CYH PF00763.23 RKO94649.1 - 1.1e-26 93.4 0.0 2e-26 92.5 0.0 1.4 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain THF_DHG_CYH_C PF02882.19 RKO94649.1 - 4.6e-14 52.0 0.1 2.3e-09 36.8 0.0 2.9 2 1 0 2 2 2 2 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DpaA_N PF16924.5 RKO94649.1 - 0.0023 18.0 0.0 0.0059 16.7 0.0 1.7 2 0 0 2 2 2 1 Dipicolinate synthase subunit A N-terminal domain DUF2388 PF09498.10 RKO94649.1 - 0.093 12.7 0.0 0.24 11.4 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2388) PRKCSH PF07915.13 RKO94650.1 - 1.5e-08 35.5 0.6 4e-08 34.1 0.6 1.8 1 1 0 1 1 1 1 Glucosidase II beta subunit-like protein PRKCSH_1 PF13015.6 RKO94650.1 - 0.03 14.0 0.2 0.055 13.2 0.2 1.3 1 0 0 1 1 1 0 Glucosidase II beta subunit-like protein Herpes_pp85 PF04637.12 RKO94650.1 - 5.5 5.3 7.2 8.3 4.7 7.2 1.2 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) HEAT_EZ PF13513.6 RKO94652.1 - 0.0083 16.6 1.5 3.6 8.2 0.1 2.4 2 1 0 2 2 2 2 HEAT-like repeat HEAT PF02985.22 RKO94652.1 - 0.031 14.5 1.7 6.8 7.2 0.0 2.8 3 0 0 3 3 3 0 HEAT repeat HEAT_2 PF13646.6 RKO94652.1 - 0.095 13.1 0.3 2.1 8.8 0.1 2.3 1 1 1 2 2 2 0 HEAT repeats DUF3384 PF11864.8 RKO94652.1 - 0.24 10.2 0.0 0.27 10.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3384) RasGEF PF00617.19 RKO94654.1 - 1.8e-50 171.6 0.1 2.7e-50 171.0 0.1 1.2 1 0 0 1 1 1 1 RasGEF domain RasGEF_N PF00618.20 RKO94654.1 - 1.7e-13 50.7 0.1 7.3e-13 48.7 0.0 2.1 3 0 0 3 3 3 1 RasGEF N-terminal motif TPR_2 PF07719.17 RKO94655.1 - 2.7 8.3 4.0 1.1e+02 3.2 0.0 4.9 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF2428 PF10350.9 RKO94656.1 - 7.5e-59 199.2 0.0 1.8e-58 198.0 0.0 1.7 1 0 0 1 1 1 1 Putative death-receptor fusion protein (DUF2428) TPR_1 PF00515.28 RKO94660.1 - 1.3e-06 28.0 2.7 0.13 12.1 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 RKO94660.1 - 1.5e-06 27.9 7.3 0.043 14.0 0.1 4.3 5 0 0 5 5 4 3 Tetratricopeptide repeat TPR_16 PF13432.6 RKO94660.1 - 3.7e-05 24.3 1.2 3.7e-05 24.3 1.2 4.2 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_19 PF14559.6 RKO94660.1 - 0.00033 21.1 0.5 0.19 12.2 0.3 2.6 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_11 PF13414.6 RKO94660.1 - 0.0019 17.9 0.8 0.15 11.8 0.1 2.6 2 0 0 2 2 2 1 TPR repeat TPR_9 PF13371.6 RKO94660.1 - 0.037 14.2 1.0 0.29 11.3 0.5 2.4 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_17 PF13431.6 RKO94660.1 - 0.046 14.1 0.1 0.53 10.8 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 RKO94660.1 - 0.068 14.0 14.7 1.2 10.1 0.1 4.7 2 1 2 4 4 4 0 Tetratricopeptide repeat TPR_8 PF13181.6 RKO94660.1 - 0.093 13.0 0.5 33 5.0 0.1 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat HicB PF05534.12 RKO94660.1 - 0.31 10.9 0.2 0.31 10.9 0.2 1.9 2 0 0 2 2 2 0 HicB family TPR_12 PF13424.6 RKO94660.1 - 0.36 11.2 4.7 6 7.2 0.2 3.0 2 1 0 2 2 2 0 Tetratricopeptide repeat Orbi_VP6 PF01516.16 RKO94660.1 - 2.6 7.5 5.1 3.9 6.9 5.1 1.2 1 0 0 1 1 1 0 Orbivirus helicase VP6 WD40 PF00400.32 RKO94661.1 - 7.8e-08 32.9 2.4 0.033 15.1 0.0 5.6 7 0 0 7 7 7 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 RKO94661.1 - 2.3e-07 31.0 0.0 0.057 13.7 0.0 5.4 4 2 0 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Complex1_49kDa PF00346.19 RKO94661.1 - 0.076 12.1 1.9 0.22 10.6 0.1 2.3 2 0 0 2 2 2 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DUF4436 PF14494.6 RKO94664.1 - 7.1e-23 81.2 8.9 2e-14 53.5 5.5 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF4436) MgtE PF01769.16 RKO94664.1 - 0.34 11.3 8.4 0.42 11.0 2.8 2.2 2 0 0 2 2 2 0 Divalent cation transporter DUF2518 PF10726.9 RKO94664.1 - 2 8.1 5.2 0.33 10.6 1.3 1.7 2 0 0 2 2 2 0 Protein of function (DUF2518) HisG PF01634.18 RKO94667.1 - 4.3e-52 176.3 0.0 5.8e-52 175.9 0.0 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 RKO94667.1 - 3.1e-28 97.7 0.3 7.7e-28 96.4 0.3 1.7 1 0 0 1 1 1 1 HisG, C-terminal domain NMT1 PF09084.11 RKO94667.1 - 0.056 13.4 0.1 0.17 11.8 0.1 1.7 1 1 0 1 1 1 0 NMT1/THI5 like AAA_6 PF12774.7 RKO94668.1 - 1.9e-129 431.3 0.0 7.8e-127 422.8 0.0 3.0 2 1 0 2 2 2 1 Hydrolytic ATP binding site of dynein motor region DHC_N2 PF08393.13 RKO94668.1 - 2.7e-107 359.3 2.5 2.7e-107 359.3 2.5 3.3 3 0 0 3 3 2 1 Dynein heavy chain, N-terminal region 2 AAA_9 PF12781.7 RKO94668.1 - 1e-71 240.6 0.6 1e-71 240.6 0.6 3.1 3 0 0 3 3 2 1 ATP-binding dynein motor region AAA_8 PF12780.7 RKO94668.1 - 1.5e-55 188.3 0.0 9.1e-54 182.5 0.0 3.5 4 0 0 4 4 4 1 P-loop containing dynein motor region D4 DHC_N1 PF08385.12 RKO94668.1 - 1.2e-40 139.7 1.1 1.2e-40 139.7 1.1 2.9 3 0 0 3 3 2 1 Dynein heavy chain, N-terminal region 1 Dynein_heavy PF03028.15 RKO94668.1 - 2.5e-38 130.8 0.0 1.2e-36 125.4 0.0 3.7 4 0 0 4 4 2 1 Dynein heavy chain region D6 P-loop domain Dynein_C PF18199.1 RKO94668.1 - 6.2e-37 127.5 0.1 1.7e-36 126.0 0.1 1.7 1 0 0 1 1 1 1 Dynein heavy chain C-terminal domain AAA_5 PF07728.14 RKO94668.1 - 5.3e-36 123.7 0.0 7.3e-18 64.9 0.0 5.6 4 2 0 4 4 4 4 AAA domain (dynein-related subfamily) MT PF12777.7 RKO94668.1 - 2.7e-30 105.6 6.1 2.7e-30 105.6 6.1 2.0 2 0 0 2 2 2 1 Microtubule-binding stalk of dynein motor AAA_lid_11 PF18198.1 RKO94668.1 - 5e-29 101.2 0.0 1.1e-28 100.2 0.0 1.6 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain AAA_7 PF12775.7 RKO94668.1 - 6.5e-29 100.7 2.3 3e-26 92.1 0.0 3.6 4 0 0 4 4 4 1 P-loop containing dynein motor region AAA_16 PF13191.6 RKO94668.1 - 5.1e-10 40.0 5.9 0.15 12.4 0.0 7.2 5 1 0 5 5 5 2 AAA ATPase domain AAA_22 PF13401.6 RKO94668.1 - 1.1e-08 35.4 1.2 0.032 14.5 0.0 5.3 4 0 0 4 4 4 2 AAA domain AAA PF00004.29 RKO94668.1 - 1.4e-07 32.0 0.1 0.31 11.5 0.0 5.3 4 0 0 4 4 4 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 RKO94668.1 - 1.9e-06 27.9 0.0 0.011 15.7 0.0 4.2 3 0 0 3 3 3 1 RsgA GTPase AAA_30 PF13604.6 RKO94668.1 - 5.1e-06 26.3 0.7 0.034 13.9 0.0 4.7 4 0 0 4 4 4 1 AAA domain ABC_tran PF00005.27 RKO94668.1 - 1.9e-05 25.2 2.5 0.035 14.6 0.0 4.5 5 0 0 5 5 3 1 ABC transporter AAA_29 PF13555.6 RKO94668.1 - 0.00028 20.6 0.0 0.09 12.5 0.0 3.6 3 0 0 3 3 3 1 P-loop containing region of AAA domain AAA_24 PF13479.6 RKO94668.1 - 0.00073 19.3 1.5 0.27 11.0 0.0 3.9 5 0 0 5 5 3 1 AAA domain AAA_18 PF13238.6 RKO94668.1 - 0.0019 18.7 0.0 2.5 8.6 0.0 4.3 3 0 0 3 3 3 1 AAA domain Rad17 PF03215.15 RKO94668.1 - 0.0051 16.7 0.5 4.4 7.2 0.1 4.4 4 1 1 5 5 5 1 Rad17 P-loop domain NACHT PF05729.12 RKO94668.1 - 0.0052 16.7 0.5 0.72 9.7 0.4 3.1 2 0 0 2 2 2 1 NACHT domain Sigma54_activat PF00158.26 RKO94668.1 - 0.0058 16.3 0.0 2.4 7.8 0.0 2.7 3 0 0 3 3 2 1 Sigma-54 interaction domain T2SSE PF00437.20 RKO94668.1 - 0.054 12.6 0.0 1.4 7.9 0.0 2.7 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_21 PF13304.6 RKO94668.1 - 0.059 13.2 0.1 0.23 11.2 0.0 2.1 2 0 0 2 2 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_33 PF13671.6 RKO94668.1 - 0.065 13.4 2.4 1.6 8.9 0.0 3.2 3 0 0 3 3 2 0 AAA domain IstB_IS21 PF01695.17 RKO94668.1 - 0.085 12.6 0.2 23 4.7 0.0 3.3 3 0 0 3 3 3 0 IstB-like ATP binding protein Borrelia_P83 PF05262.11 RKO94668.1 - 0.14 10.6 7.4 0.3 9.5 7.4 1.4 1 0 0 1 1 1 0 Borrelia P83/100 protein ATPase_2 PF01637.18 RKO94668.1 - 0.15 11.9 3.9 5.2 6.9 0.0 3.7 3 0 0 3 3 2 0 ATPase domain predominantly from Archaea Sec34 PF04136.15 RKO94668.1 - 0.2 11.5 8.9 1.1 9.1 4.2 3.9 3 0 0 3 3 3 0 Sec34-like family DUF3450 PF11932.8 RKO94668.1 - 0.44 9.8 19.3 0.26 10.6 10.0 3.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3450) Guanylate_kin PF00625.21 RKO94668.1 - 0.6 9.8 4.9 2.8 7.6 0.0 3.1 3 0 0 3 3 2 0 Guanylate kinase KxDL PF10241.9 RKO94668.1 - 0.78 10.1 11.0 3.7 7.9 0.3 5.5 3 2 2 5 5 4 0 Uncharacterized conserved protein DUF948 PF06103.11 RKO94668.1 - 1.1 9.6 5.7 37 4.7 0.1 3.6 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF1664 PF07889.12 RKO94668.1 - 1.1 9.3 9.0 12 5.9 2.7 4.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) AAA_23 PF13476.6 RKO94668.1 - 1.5 9.3 0.0 1.5 9.3 0.0 5.6 7 1 0 7 7 2 0 AAA domain DUF2968 PF11180.8 RKO94668.1 - 1.9 8.1 11.8 2.9 7.5 0.1 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2968) FlaC_arch PF05377.11 RKO94668.1 - 3.6 8.0 10.0 0.95 9.9 0.0 5.2 4 1 1 5 5 3 0 Flagella accessory protein C (FlaC) Mg_chelatase PF01078.21 RKO94668.1 - 4.9 6.5 5.9 17 4.7 0.0 3.9 5 0 0 5 5 4 0 Magnesium chelatase, subunit ChlI UPF0561 PF10573.9 RKO94669.1 - 0.52 10.4 2.4 0.68 10.1 0.1 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0561 Flagellin_C PF00700.21 RKO94669.1 - 2.4 8.5 3.9 2.3 8.6 0.1 2.5 3 0 0 3 3 3 0 Bacterial flagellin C-terminal helical region Whi5 PF08528.11 RKO94671.1 - 1.4e-08 34.2 0.0 2.5e-08 33.4 0.0 1.5 1 0 0 1 1 1 1 Whi5 like DUF5092 PF17010.5 RKO94672.1 - 6.6e-16 58.6 0.0 3.5e-07 30.3 0.0 3.1 3 0 0 3 3 3 3 Domain of unknown function (DUF5092) DUF751 PF05421.11 RKO94672.1 - 0.051 14.3 0.2 0.1 13.4 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF751) ASH PF15780.5 RKO94673.1 - 3.2e-43 145.9 13.9 0.00059 20.0 0.0 17.9 19 0 0 19 19 19 10 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Motile_Sperm PF00635.26 RKO94673.1 - 2.6e-21 75.5 1.1 0.015 15.1 0.1 9.8 9 0 0 9 9 9 6 MSP (Major sperm protein) domain DUF1573 PF07610.11 RKO94673.1 - 4.9e-14 52.1 8.0 0.22 11.6 0.1 11.8 14 0 0 14 14 14 4 Protein of unknown function (DUF1573) TMEM131_like PF12371.8 RKO94673.1 - 8.6e-08 32.3 11.8 0.25 11.6 0.0 11.0 13 0 0 13 13 13 2 Transmembrane protein 131-like PapD-like PF14874.6 RKO94673.1 - 0.00041 20.4 3.2 0.8 9.9 0.2 7.0 8 0 0 8 8 8 1 Flagellar-associated PapD-like DUF4402 PF14352.6 RKO94673.1 - 3.5 8.3 10.3 5.1 7.8 0.1 5.3 5 1 0 5 5 5 0 Domain of unknown function (DUF4402) F-box-like PF12937.7 RKO94674.1 - 2.6e-07 30.4 0.6 6.2e-07 29.2 0.6 1.6 1 0 0 1 1 1 1 F-box-like F-box PF00646.33 RKO94674.1 - 8.8e-06 25.5 0.5 8.8e-06 25.5 0.5 2.0 2 0 0 2 2 2 1 F-box domain Lipase_3 PF01764.25 RKO94676.1 - 2.4e-25 89.1 0.0 3.2e-25 88.7 0.0 1.2 1 0 0 1 1 1 1 Lipase (class 3) DUF2974 PF11187.8 RKO94676.1 - 2.2e-06 27.4 0.1 1.3e-05 24.9 0.1 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF2974) Abhydrolase_8 PF06259.12 RKO94676.1 - 0.084 12.5 0.1 0.14 11.8 0.1 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase cNMP_binding PF00027.29 RKO94677.1 - 2e-16 59.8 0.0 6.8e-16 58.1 0.0 1.9 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain cNMP_binding PF00027.29 RKO94678.1 - 1.1e-10 41.4 0.0 6.7e-08 32.5 0.0 2.6 2 1 0 2 2 2 1 Cyclic nucleotide-binding domain MSV199 PF10553.9 RKO94678.1 - 0.12 12.6 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 MSV199 domain Gram_pos_anchor PF00746.21 RKO94679.1 - 0.093 12.7 0.1 0.24 11.4 0.1 1.7 1 0 0 1 1 1 0 LPXTG cell wall anchor motif cNMP_binding PF00027.29 RKO94680.1 - 1.7e-10 40.8 0.0 6.6e-08 32.5 0.0 2.7 2 1 0 2 2 2 1 Cyclic nucleotide-binding domain Pkinase PF00069.25 RKO94681.1 - 2.8e-67 226.9 0.0 3.2e-67 226.7 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 RKO94681.1 - 5.7e-43 147.1 0.0 6.6e-43 146.9 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 RKO94681.1 - 1.8e-05 23.9 0.1 2.4e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Pkinase_fungal PF17667.1 RKO94681.1 - 0.0003 19.7 0.1 0.00033 19.5 0.1 1.2 1 0 0 1 1 1 1 Fungal protein kinase RIO1 PF01163.22 RKO94681.1 - 0.00037 20.2 2.1 0.00083 19.0 2.2 1.4 1 1 0 1 1 1 1 RIO1 family Kdo PF06293.14 RKO94681.1 - 0.0023 17.3 2.0 0.0064 15.9 2.1 1.6 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 RKO94681.1 - 0.022 14.1 0.6 0.2 10.9 0.8 2.4 1 1 1 2 2 2 0 Kinase-like DUF4135 PF13575.6 RKO94681.1 - 0.045 13.1 0.1 0.067 12.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) Bac_DNA_binding PF00216.21 RKO94681.1 - 0.048 13.9 0.3 1.4 9.2 0.0 2.4 2 0 0 2 2 2 0 Bacterial DNA-binding protein APH PF01636.23 RKO94681.1 - 0.051 13.5 1.3 1.8 8.4 0.1 2.1 1 1 1 2 2 2 0 Phosphotransferase enzyme family DUF3791 PF12668.7 RKO94681.1 - 0.084 12.9 0.3 0.49 10.5 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3791) PGAP1 PF07819.13 RKO94684.1 - 3.5e-79 265.8 0.0 5.2e-79 265.2 0.0 1.2 1 0 0 1 1 1 1 PGAP1-like protein Abhydrolase_6 PF12697.7 RKO94684.1 - 0.00022 21.9 0.7 0.00022 21.9 0.7 3.0 2 1 1 3 3 3 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 RKO94684.1 - 0.0058 16.3 0.1 0.014 15.1 0.1 1.6 1 1 0 1 1 1 1 alpha/beta hydrolase fold DUF676 PF05057.14 RKO94684.1 - 0.013 15.1 0.1 0.022 14.3 0.1 1.3 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Hydrolase_4 PF12146.8 RKO94684.1 - 0.047 13.0 0.0 0.085 12.1 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Homeodomain PF00046.29 RKO94685.1 - 5.6e-07 29.3 0.5 1.2e-06 28.3 0.5 1.5 1 0 0 1 1 1 1 Homeodomain DUF4508 PF14969.6 RKO94685.1 - 0.9 9.8 3.9 0.25 11.6 1.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4508) DNA_pol3_delta2 PF13177.6 RKO94686.1 - 1.2e-11 44.7 0.5 7e-11 42.2 0.2 2.0 2 0 0 2 2 2 1 DNA polymerase III, delta subunit AAA PF00004.29 RKO94686.1 - 4.4e-05 23.9 0.1 0.00012 22.5 0.1 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Atg8 PF02991.16 RKO94687.1 - 1.5e-39 134.4 0.0 1.7e-39 134.2 0.0 1.0 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 RKO94687.1 - 4.6e-06 27.0 0.1 5.8e-06 26.6 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 Chitin_synth_2 PF03142.15 RKO94689.1 - 8.8e-17 60.9 0.0 1.6e-16 60.0 0.0 1.3 1 1 0 1 1 1 1 Chitin synthase Glyco_trans_2_3 PF13632.6 RKO94689.1 - 2.1e-11 44.1 0.0 3e-11 43.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 RKO94689.1 - 5.9e-10 39.4 0.0 7.7e-10 39.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 PCNA_N PF00705.18 RKO94690.1 - 2.6e-16 59.5 3.1 2.6e-16 59.5 3.1 1.6 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 RKO94690.1 - 4.3e-12 46.3 2.9 7.5e-12 45.5 1.1 2.2 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain LAMTOR5 PF16672.5 RKO94690.1 - 0.046 13.6 0.0 0.19 11.7 0.1 2.0 2 0 0 2 2 2 0 Ragulator complex protein LAMTOR5 POC1 PF10450.9 RKO94690.1 - 0.46 9.4 5.0 0.71 8.8 1.9 2.0 1 1 0 2 2 2 0 POC1 chaperone Transketolase_N PF00456.21 RKO94692.1 - 0.17 10.8 0.6 0.28 10.1 0.6 1.3 1 0 0 1 1 1 0 Transketolase, thiamine diphosphate binding domain Acetyltransf_10 PF13673.7 RKO94693.1 - 7.5e-13 48.5 0.0 8.9e-13 48.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 RKO94693.1 - 4.9e-12 46.1 0.0 6e-12 45.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 RKO94693.1 - 1.3e-10 41.5 0.1 1.9e-10 41.0 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 RKO94693.1 - 3.9e-05 23.6 0.0 5.4e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 RKO94693.1 - 0.0015 18.6 0.0 0.005 16.9 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 RKO94693.1 - 0.0053 16.9 0.2 0.0093 16.1 0.2 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 RKO94693.1 - 0.011 15.3 0.0 0.015 14.9 0.0 1.1 1 0 0 1 1 1 0 GNAT acetyltransferase Acetyltransf_18 PF18014.1 RKO94693.1 - 0.034 14.0 0.0 0.058 13.2 0.0 1.4 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 RKO94693.1 - 0.066 12.7 1.6 0.53 9.7 1.4 2.0 1 1 0 1 1 1 0 Putative acetyl-transferase RNA_pol_Rpb1_1 PF04997.12 RKO94694.1 - 1e-66 225.4 4.2 5.2e-54 183.7 0.1 3.2 2 1 1 3 3 3 2 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 RKO94694.1 - 9.8e-64 214.6 0.2 1.8e-63 213.7 0.2 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 RKO94694.1 - 1.8e-42 144.9 0.0 5.7e-42 143.3 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_5 PF04998.17 RKO94694.1 - 8.1e-33 114.0 0.0 1.5e-31 109.8 0.0 2.2 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_4 PF05000.17 RKO94694.1 - 1.6e-31 108.5 0.1 3.7e-31 107.3 0.1 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_6 PF04992.14 RKO94694.1 - 3.6e-18 66.1 2.7 9.4e-10 38.6 0.1 3.7 2 1 2 4 4 4 3 RNA polymerase Rpb1, domain 6 Yae1_N PF09811.9 RKO94697.1 - 0.14 11.9 0.1 0.27 11.0 0.1 1.4 1 0 0 1 1 1 0 Essential protein Yae1, N terminal Haemagg_act PF05860.13 RKO94702.1 - 0.13 12.2 0.1 7.2 6.5 0.0 2.2 2 0 0 2 2 2 0 haemagglutination activity domain DNA_pol3_delta2 PF13177.6 RKO94704.1 - 5.5e-14 52.3 0.0 9.8e-14 51.4 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA PF00004.29 RKO94704.1 - 1.8e-10 41.4 0.0 3.5e-10 40.4 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 RKO94704.1 - 1.4e-06 28.1 0.0 4e-05 23.4 0.0 2.4 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain ATPase_2 PF01637.18 RKO94704.1 - 3.2e-05 24.0 0.0 0.041 13.8 0.0 2.2 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea ResIII PF04851.15 RKO94704.1 - 0.0016 18.5 0.0 0.38 10.7 0.0 2.4 1 1 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 RKO94704.1 - 0.0027 18.0 0.0 0.04 14.2 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 RKO94704.1 - 0.0028 18.2 0.3 0.0044 17.5 0.2 1.6 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 RKO94704.1 - 0.0028 17.6 0.0 0.0069 16.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 RKO94704.1 - 0.0034 17.8 0.0 0.014 15.8 0.0 1.9 1 1 0 2 2 2 1 AAA ATPase domain NACHT PF05729.12 RKO94704.1 - 0.0047 16.9 0.1 0.047 13.6 0.0 2.4 2 0 0 2 2 2 1 NACHT domain AAA_19 PF13245.6 RKO94704.1 - 0.0082 16.5 0.1 2.1 8.6 0.1 2.8 2 1 0 2 2 2 1 AAA domain TsaE PF02367.17 RKO94704.1 - 0.019 15.0 0.0 0.04 13.9 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE T2SSE PF00437.20 RKO94704.1 - 0.02 14.0 0.0 0.029 13.4 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_30 PF13604.6 RKO94704.1 - 0.024 14.4 0.0 0.13 12.0 0.0 2.1 1 1 0 1 1 1 0 AAA domain PIF1 PF05970.14 RKO94704.1 - 0.03 13.5 0.1 0.094 11.9 0.1 1.8 1 1 0 1 1 1 0 PIF1-like helicase DEAD PF00270.29 RKO94704.1 - 0.041 13.7 0.2 4.2 7.1 0.0 2.3 1 1 0 2 2 2 0 DEAD/DEAH box helicase PhoH PF02562.16 RKO94704.1 - 0.073 12.5 0.0 0.26 10.7 0.0 1.9 1 1 1 2 2 2 0 PhoH-like protein AAA_21 PF13304.6 RKO94704.1 - 0.085 12.7 0.1 0.18 11.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system RNA_helicase PF00910.22 RKO94704.1 - 0.087 13.2 0.0 1.1 9.7 0.0 2.3 2 0 0 2 2 2 0 RNA helicase AAA_18 PF13238.6 RKO94704.1 - 0.12 12.9 0.0 0.25 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 RKO94704.1 - 0.15 11.3 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Cytidylate_kin PF02224.18 RKO94704.1 - 0.16 11.7 0.2 0.58 9.9 0.2 2.0 1 1 0 1 1 1 0 Cytidylate kinase DNA_ligase_OB_2 PF14743.6 RKO94705.1 - 5.7e-18 64.7 0.2 1.3e-17 63.6 0.2 1.6 1 0 0 1 1 1 1 DNA ligase OB-like domain DNA_ligase_A_M PF01068.21 RKO94705.1 - 4.4e-09 36.3 0.0 6e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 ATP dependent DNA ligase domain Atg8 PF02991.16 RKO94706.1 - 4.1e-37 126.5 0.0 4.9e-37 126.3 0.0 1.1 1 0 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 RKO94706.1 - 4.5e-06 27.0 0.0 5.8e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like autophagy protein Apg12 Glyco_hydro_18 PF00704.28 RKO94707.1 - 5.5e-13 49.3 0.2 6.4e-13 49.1 0.2 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 Chitin_synth_2 PF03142.15 RKO94708.1 - 1.9e-17 63.1 0.0 1.1e-16 60.6 0.0 2.1 2 0 0 2 2 2 1 Chitin synthase Glyco_trans_2_3 PF13632.6 RKO94708.1 - 4.1e-12 46.4 0.1 4.1e-12 46.4 0.1 2.2 2 1 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 RKO94708.1 - 3.3e-09 37.0 0.0 6.3e-09 36.0 0.0 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 RKO94708.1 - 0.00048 20.0 0.0 0.16 11.8 0.1 2.3 2 0 0 2 2 2 2 Glycosyl transferase family 2 PCNA_N PF00705.18 RKO94709.1 - 7.7e-17 61.2 3.5 7.7e-17 61.2 3.5 1.6 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 RKO94709.1 - 1e-10 41.9 2.9 3.2e-10 40.3 1.2 2.4 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain LAMTOR5 PF16672.5 RKO94709.1 - 0.0087 16.0 0.1 0.042 13.8 0.1 2.1 2 0 0 2 2 2 1 Ragulator complex protein LAMTOR5 DUF3698 PF12479.8 RKO94711.1 - 0.25 11.9 1.9 0.46 11.1 0.3 2.2 1 1 2 3 3 3 0 Protein of unknown function (DUF3698) DUF2951 PF11166.8 RKO94711.1 - 4.5 7.6 7.5 9.9 6.5 2.4 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF2951) Acetyltransf_10 PF13673.7 RKO94712.1 - 3.7e-13 49.5 0.0 4.5e-13 49.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 RKO94712.1 - 6.6e-13 48.9 0.0 8.1e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 RKO94712.1 - 1.4e-11 44.7 0.0 1.9e-11 44.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 RKO94712.1 - 3.5e-07 30.1 0.0 5e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 RKO94712.1 - 0.00047 20.3 0.1 0.00095 19.3 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 RKO94712.1 - 0.00065 19.8 0.0 0.0024 17.9 0.0 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 RKO94712.1 - 0.0022 17.6 0.0 0.0029 17.2 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_15 PF17013.5 RKO94712.1 - 0.06 12.8 0.1 0.099 12.1 0.1 1.5 1 1 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_18 PF18014.1 RKO94712.1 - 0.16 11.8 0.0 0.26 11.1 0.0 1.3 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF347 PF03988.12 RKO94713.1 - 3.7 7.8 5.3 2.3 8.5 0.0 2.7 3 0 0 3 3 3 0 Repeat of Unknown Function (DUF347) ubiquitin PF00240.23 RKO94714.1 - 5.6e-35 118.9 0.6 6.1e-35 118.8 0.6 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 RKO94714.1 - 4.9e-17 61.5 0.5 5.4e-17 61.4 0.5 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 RKO94714.1 - 1.4e-06 28.7 0.2 5.4e-06 26.8 0.2 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_4 PF18036.1 RKO94714.1 - 0.0007 19.6 0.3 0.73 9.9 0.1 2.0 2 0 0 2 2 2 2 Ubiquitin-like domain Ubiquitin_5 PF18037.1 RKO94714.1 - 0.00079 19.7 0.1 0.0009 19.6 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain TBK1_ULD PF18396.1 RKO94714.1 - 0.0014 18.5 0.0 0.0015 18.4 0.0 1.2 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 RKO94714.1 - 0.0037 17.4 0.1 0.0083 16.2 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 RKO94714.1 - 0.02 15.4 0.1 0.023 15.2 0.1 1.1 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 RKO94714.1 - 0.033 14.0 0.0 0.037 13.9 0.0 1.0 1 0 0 1 1 1 0 Silencing defective 2 N-terminal ubiquitin domain RNA_pol_Rpb1_1 PF04997.12 RKO94715.1 - 1.1e-69 235.2 1.7 1.8e-69 234.5 1.7 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 RKO94715.1 - 1.7e-63 213.8 0.1 3.1e-63 212.9 0.1 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 RKO94715.1 - 6.5e-46 156.1 0.0 1.8e-45 154.7 0.0 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_5 PF04998.17 RKO94715.1 - 2.2e-41 142.1 0.0 4.8e-41 141.0 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_4 PF05000.17 RKO94715.1 - 1.9e-32 111.4 0.1 4.3e-32 110.3 0.1 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_6 PF04992.14 RKO94715.1 - 2.6e-22 79.6 0.0 2.6e-17 63.3 0.0 2.7 1 1 1 2 2 2 2 RNA polymerase Rpb1, domain 6 RNA_pol_Rpb1_7 PF04990.12 RKO94716.1 - 4e-26 91.6 1.1 5.5e-26 91.2 1.1 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 7 RNA_pol_Rpb1_5 PF04998.17 RKO94716.1 - 9.4e-20 71.1 0.0 1.1e-19 71.0 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 D5_N PF08706.11 RKO94718.1 - 3.4e-11 43.6 0.2 5.7e-10 39.7 0.0 2.5 2 0 0 2 2 2 1 D5 N terminal like PPL4 PF18188.1 RKO94718.1 - 5.5e-06 26.4 0.8 1.7e-05 24.8 0.8 1.9 1 0 0 1 1 1 1 Prim-pol 4 PIN_8 PF18476.1 RKO94718.1 - 0.0047 16.8 1.0 0.43 10.4 0.1 2.4 2 0 0 2 2 2 2 PIN like domain DUF4795 PF16043.5 RKO94718.1 - 0.03 13.9 3.1 0.12 11.9 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) PP_kinase_N PF13089.6 RKO94718.1 - 0.073 13.4 0.3 0.073 13.4 0.3 2.0 2 0 0 2 2 2 0 Polyphosphate kinase N-terminal domain ZT_dimer PF16916.5 RKO94718.1 - 0.11 12.6 0.0 0.35 11.0 0.0 1.9 1 0 0 1 1 1 0 Dimerisation domain of Zinc Transporter cNMP_binding PF00027.29 RKO94719.1 - 1.4e-11 44.3 0.4 2.7e-05 24.1 0.1 2.9 2 1 1 3 3 3 2 Cyclic nucleotide-binding domain PepSY_TM PF03929.16 RKO94719.1 - 0.039 13.6 0.0 0.11 12.2 0.0 1.7 2 0 0 2 2 2 0 PepSY-associated TM region IL4_i_Ig PF18258.1 RKO94720.1 - 0.094 12.9 0.5 10 6.4 0.0 2.6 1 1 1 2 2 2 0 Interleukin-4 inducing immunoglobulin-binding domain Cyt-b5 PF00173.28 RKO94725.1 - 4.4e-09 36.4 0.3 6.1e-09 35.9 0.3 1.3 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain 7tm_3 PF00003.22 RKO94726.1 - 4.5e-19 69.1 16.0 3.8e-18 66.1 6.1 3.2 2 1 0 2 2 2 2 7 transmembrane sweet-taste receptor of 3 GCPR Laminin_G_3 PF13385.6 RKO94726.1 - 5.7e-13 49.3 3.1 3.1e-06 27.4 0.0 4.3 3 1 0 3 3 3 3 Concanavalin A-like lectin/glucanases superfamily Pentaxin PF00354.17 RKO94726.1 - 0.071 12.8 0.0 4.4 6.9 0.0 2.3 2 0 0 2 2 2 0 Pentaxin family Chromo PF00385.24 RKO94728.1 - 1.6e-08 34.4 0.1 2e-08 34.0 0.1 1.2 1 0 0 1 1 1 1 Chromo (CHRromatin Organisation MOdifier) domain OPT PF03169.15 RKO94729.1 - 1.8e-56 192.0 12.3 2.1e-56 191.9 12.3 1.0 1 0 0 1 1 1 1 OPT oligopeptide transporter protein DUF3000 PF11452.8 RKO94730.1 - 0.041 13.4 0.0 0.062 12.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3000) DEC-1_N PF04625.13 RKO94731.1 - 8.1 5.3 18.1 14 4.5 18.1 1.4 1 0 0 1 1 1 0 DEC-1 protein, N-terminal region SH3_9 PF14604.6 RKO94732.1 - 2.4e-09 36.9 0.0 4.3e-09 36.1 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO94732.1 - 1.3e-06 27.9 0.0 2e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 SH3 domain SH3_2 PF07653.17 RKO94732.1 - 0.0034 17.0 0.0 0.0062 16.2 0.0 1.4 1 0 0 1 1 1 1 Variant SH3 domain PTP_tm PF18861.1 RKO94732.1 - 0.15 12.0 0.1 0.22 11.5 0.1 1.2 1 0 0 1 1 1 0 Transmembrane domain of protein tyrosine phosphatase, receptor type J Integrase_H2C2 PF17921.1 RKO94733.1 - 0.00024 21.1 0.2 0.0003 20.8 0.2 1.1 1 0 0 1 1 1 1 Integrase zinc binding domain DUF3429 PF11911.8 RKO94736.1 - 5.6e-14 52.6 4.7 8.1e-14 52.1 4.7 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3429) Pkinase PF00069.25 RKO94739.1 - 1.3e-09 37.8 0.0 2.1e-09 37.2 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain DNA_topoisoIV PF00521.20 RKO94741.1 - 9e-15 54.5 0.0 1.3e-14 54.0 0.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A CNDH2_C PF16858.5 RKO94742.1 - 0.4 10.5 6.0 0.53 10.1 6.0 1.2 1 0 0 1 1 1 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term NOA36 PF06524.12 RKO94742.1 - 2.5 7.3 12.5 3.7 6.8 12.5 1.2 1 0 0 1 1 1 0 NOA36 protein Nop14 PF04147.12 RKO94742.1 - 8.1 4.5 13.0 13 3.9 13.0 1.2 1 0 0 1 1 1 0 Nop14-like family Hydrolase_6 PF13344.6 RKO94743.1 - 1.6e-26 92.4 0.0 2.4e-26 91.8 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 RKO94743.1 - 2.3e-17 62.8 0.0 4.6e-17 61.9 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.6 RKO94743.1 - 3.5e-08 33.7 0.0 5.1e-06 26.7 0.0 2.4 2 1 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 RKO94743.1 - 6.2e-07 29.9 0.0 1.6e-05 25.3 0.0 2.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HEM4 PF02602.15 RKO94743.1 - 0.089 12.1 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD Amidase PF01425.21 RKO94744.1 - 1.9e-16 60.1 0.0 2.9e-16 59.5 0.0 1.2 1 1 0 1 1 1 1 Amidase ATP_bind_1 PF03029.17 RKO94747.1 - 8.1e-06 25.8 0.0 1.1e-05 25.4 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein YecR PF13992.6 RKO94752.1 - 0.075 13.3 0.2 0.11 12.9 0.2 1.2 1 0 0 1 1 1 0 YecR-like lipoprotein COesterase PF00135.28 RKO94756.1 - 6.5e-22 78.1 2.7 7.1e-22 78.0 2.7 1.0 1 0 0 1 1 1 1 Carboxylesterase family Cactin_mid PF10312.9 RKO94757.1 - 4e-61 206.2 0.9 1.2e-60 204.7 0.9 1.9 1 0 0 1 1 1 1 Conserved mid region of cactin CactinC_cactus PF09732.9 RKO94757.1 - 3.2e-59 198.3 9.4 5.2e-59 197.7 9.4 1.3 1 0 0 1 1 1 1 Cactus-binding C-terminus of cactin protein bHLH-MYC_N PF14215.6 RKO94757.1 - 3.9 7.7 5.3 0.98 9.7 0.9 2.2 2 1 1 3 3 3 0 bHLH-MYC and R2R3-MYB transcription factors N-terminal Glyco_tran_28_C PF04101.16 RKO94758.1 - 1.8e-20 73.6 0.0 2e-20 73.4 0.0 1.0 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain CbiG_mid PF11761.8 RKO94759.1 - 0.011 15.8 0.1 0.024 14.7 0.1 1.5 1 0 0 1 1 1 0 Cobalamin biosynthesis central region SH3_9 PF14604.6 RKO94761.1 - 4.4e-09 36.1 0.0 7.2e-09 35.4 0.0 1.3 1 0 0 1 1 1 1 Variant SH3 domain SH3_1 PF00018.28 RKO94761.1 - 2.7e-06 26.9 0.0 4.2e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 SH3 domain Reeler PF02014.16 RKO94761.1 - 1.2e-05 26.0 0.0 9.5e-05 23.2 0.0 2.2 1 1 0 1 1 1 1 Reeler domain PKcGMP_CC PF16808.5 RKO94767.1 - 0.069 13.0 0.6 0.12 12.3 0.6 1.3 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Peptidase_S8 PF00082.22 RKO94768.1 - 8.9e-17 61.3 0.0 1.1e-16 61.0 0.0 1.1 1 0 0 1 1 1 1 Subtilase family DUF5565 PF17720.1 RKO94769.1 - 0.00069 18.6 0.7 0.0011 17.9 0.7 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5565) CP_ATPgrasp_2 PF14403.6 RKO94769.1 - 0.18 10.7 0.0 0.25 10.2 0.0 1.2 1 0 0 1 1 1 0 Circularly permuted ATP-grasp type 2 Acetyltransf_1 PF00583.25 RKO94772.1 - 0.092 13.0 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family DUF5635 PF18685.1 RKO94772.1 - 0.14 12.1 0.0 0.4 10.6 0.0 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5635) Chitin_synth_2 PF03142.15 RKO94774.1 - 3.2e-246 818.0 0.2 5.3e-246 817.3 0.2 1.2 1 0 0 1 1 1 1 Chitin synthase Glyco_tranf_2_3 PF13641.6 RKO94774.1 - 9.2e-13 48.6 0.0 3.4e-12 46.7 0.0 1.8 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 RKO94774.1 - 1.1e-12 48.2 5.6 5.5e-12 46.0 5.6 2.3 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 RKO94774.1 - 2e-05 24.2 0.1 0.0016 18.0 0.0 2.3 2 0 0 2 2 2 1 Glycosyl transferase family 21 Glycos_transf_2 PF00535.26 RKO94774.1 - 9.8e-05 22.2 0.0 0.0045 16.8 0.0 2.4 2 0 0 2 2 2 1 Glycosyl transferase family 2 Ank_2 PF12796.7 RKO94775.1 - 6.3e-30 103.6 0.4 2.2e-09 37.7 0.0 4.2 1 1 3 4 4 4 4 Ankyrin repeats (3 copies) Ank PF00023.30 RKO94775.1 - 3.4e-23 81.0 15.3 6.7e-06 26.3 0.1 5.9 6 0 0 6 6 6 5 Ankyrin repeat Ank_3 PF13606.6 RKO94775.1 - 5.1e-23 78.7 5.7 0.00043 20.5 0.0 7.3 7 1 0 7 7 7 4 Ankyrin repeat Ank_4 PF13637.6 RKO94775.1 - 1.7e-21 76.3 3.8 7.2e-06 26.5 0.1 5.5 3 1 1 5 5 5 5 Ankyrin repeats (many copies) Ank_5 PF13857.6 RKO94775.1 - 4.8e-18 65.0 7.2 2.6e-06 27.6 0.1 5.0 3 2 2 5 5 5 4 Ankyrin repeats (many copies) DUF4395 PF14340.6 RKO94776.1 - 0.009 16.3 0.0 0.018 15.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4395) NUP50 PF08911.11 RKO94776.1 - 0.023 15.3 0.7 0.089 13.5 0.7 1.9 1 0 0 1 1 1 0 NUP50 (Nucleoporin 50 kDa) Beach PF02138.18 RKO94777.1 - 1.3e-113 379.0 0.0 2.3e-113 378.2 0.0 1.4 1 0 0 1 1 1 1 Beige/BEACH domain PH_BEACH PF14844.6 RKO94777.1 - 5.1e-12 45.8 0.1 1.5e-11 44.3 0.1 1.8 1 0 0 1 1 1 1 PH domain associated with Beige/BEACH DUF4704 PF15787.5 RKO94777.1 - 7.3e-08 32.0 1.0 3.1e-07 29.9 0.0 2.5 3 1 0 3 3 3 1 Domain of unknown function (DUF4704) Laminin_G_3 PF13385.6 RKO94777.1 - 1.3e-05 25.4 0.0 5.8e-05 23.3 0.0 2.0 2 0 0 2 2 2 1 Concanavalin A-like lectin/glucanases superfamily DUF4800 PF16057.5 RKO94777.1 - 0.00047 19.5 5.0 0.0013 18.1 2.5 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4800) WD40 PF00400.32 RKO94777.1 - 0.029 15.3 1.3 1.2 10.1 0.0 3.4 2 0 0 2 2 2 0 WD domain, G-beta repeat NmrA PF05368.13 RKO94779.1 - 0.0012 18.4 0.0 0.0013 18.3 0.0 1.0 1 0 0 1 1 1 1 NmrA-like family Coilin_N PF15862.5 RKO94780.1 - 6.3e-06 26.0 0.0 2.4e-05 24.2 0.0 2.0 1 1 0 1 1 1 1 Coilin N-terminus SDA1 PF05285.12 RKO94780.1 - 0.085 12.3 13.5 0.13 11.7 13.5 1.2 1 0 0 1 1 1 0 SDA1 FYDLN_acid PF09538.10 RKO94780.1 - 0.16 12.6 10.9 0.57 10.9 10.9 2.1 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) Nop14 PF04147.12 RKO94780.1 - 0.34 9.1 15.5 0.47 8.6 15.5 1.1 1 0 0 1 1 1 0 Nop14-like family BUD22 PF09073.10 RKO94780.1 - 0.39 10.0 25.6 0.69 9.2 25.6 1.3 1 0 0 1 1 1 0 BUD22 Cwf_Cwc_15 PF04889.12 RKO94780.1 - 0.84 9.3 12.0 1.6 8.4 12.0 1.4 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein CDC45 PF02724.14 RKO94780.1 - 1.1 7.5 10.4 1.5 7.1 10.4 1.1 1 0 0 1 1 1 0 CDC45-like protein D5_N PF08706.11 RKO94782.1 - 3.7e-09 37.0 0.1 6.1e-09 36.3 0.1 1.3 1 0 0 1 1 1 1 D5 N terminal like RNA_pol_Rpb1_2 PF00623.20 RKO94783.1 - 1.2e-26 93.9 0.4 3.5e-26 92.4 0.0 1.9 2 1 0 2 2 2 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 RKO94783.1 - 1.5e-24 86.7 0.2 2.5e-18 66.5 0.0 3.3 2 1 1 3 3 3 2 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_1 PF04997.12 RKO94783.1 - 1.1e-21 77.6 5.5 1.7e-16 60.4 0.1 3.2 2 1 1 3 3 3 2 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_5 PF04998.17 RKO94783.1 - 3.5e-19 69.3 0.0 3.5e-19 69.3 0.0 2.5 2 1 0 2 2 2 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_4 PF05000.17 RKO94783.1 - 1.5e-16 60.3 0.1 4.4e-16 58.8 0.1 1.9 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 4 FtsL PF04999.13 RKO94783.1 - 0.035 14.1 0.1 0.13 12.3 0.1 1.9 1 0 0 1 1 1 0 Cell division protein FtsL DsbB PF02600.16 RKO94787.1 - 0.012 16.1 2.1 0.024 15.1 2.1 1.5 1 0 0 1 1 1 0 Disulfide bond formation protein DsbB FapA PF03961.13 RKO94788.1 - 1.5 7.4 4.6 0.89 8.1 2.1 1.8 2 0 0 2 2 2 0 Flagellar Assembly Protein A Holin_BhlA PF10960.8 RKO94789.1 - 0.054 13.5 0.0 0.096 12.7 0.0 1.5 1 0 0 1 1 1 0 BhlA holin family FlaG PF03646.15 RKO94790.1 - 0.028 14.6 0.1 0.028 14.6 0.1 2.1 2 0 0 2 2 2 0 FlaG protein DUF1910 PF08928.10 RKO94790.1 - 0.17 11.8 1.9 0.32 11.0 0.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1910) TPT PF03151.16 RKO94791.1 - 1.6e-29 103.2 25.3 1.9e-29 102.9 25.3 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 RKO94791.1 - 4.7 7.4 39.1 2.7 8.2 15.9 2.3 2 0 0 2 2 2 0 EamA-like transporter family Amino_oxidase PF01593.24 RKO94792.1 - 2.2e-09 37.2 0.0 3.4e-09 36.5 0.0 1.3 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 RKO94792.1 - 3.5e-07 30.4 0.1 6.6e-07 29.5 0.1 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 RKO94792.1 - 0.068 12.4 0.1 0.13 11.5 0.1 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 RKO94792.1 - 0.19 10.9 0.0 0.39 9.9 0.0 1.5 1 0 0 1 1 1 0 FAD binding domain FHA PF00498.26 RKO94794.1 - 2.3e-19 69.5 0.0 3.2e-19 69.0 0.0 1.2 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 RKO94794.1 - 4.8e-06 26.8 0.0 0.00012 22.4 0.0 2.1 1 1 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain Ribosomal_S7 PF00177.21 RKO94795.1 - 8e-26 90.5 0.0 9e-26 90.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e YfdX PF10938.8 RKO94795.1 - 0.057 13.3 0.0 0.091 12.7 0.0 1.3 1 0 0 1 1 1 0 YfdX protein Herpes_UL51 PF04540.13 RKO94795.1 - 0.095 12.4 0.0 0.18 11.5 0.0 1.5 1 0 0 1 1 1 0 Herpesvirus UL51 protein Ank_4 PF13637.6 RKO94798.1 - 0.00036 21.1 0.0 0.27 11.8 0.0 3.0 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 RKO94798.1 - 0.011 16.3 0.0 0.16 12.6 0.0 2.3 1 1 0 2 2 2 0 Ankyrin repeats (3 copies) Ank_5 PF13857.6 RKO94798.1 - 0.035 14.4 0.0 13 6.3 0.0 3.2 2 1 1 3 3 3 0 Ankyrin repeats (many copies) DUF5049 PF16468.5 RKO94798.1 - 0.049 13.5 0.0 0.58 10.1 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5049) DUF1132 PF06575.12 RKO94799.1 - 0.031 14.6 0.0 0.11 12.8 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1132) PEPCK_ATP PF01293.20 RKO94800.1 - 0.00029 19.7 0.0 0.00029 19.6 0.0 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase Asp PF00026.23 RKO94801.1 - 1.7e-46 159.1 7.2 2e-46 158.9 7.2 1.0 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 RKO94801.1 - 6.5e-06 26.0 0.0 6.9e-05 22.7 0.0 2.2 1 1 0 1 1 1 1 Xylanase inhibitor C-terminal Asp_protease_2 PF13650.6 RKO94801.1 - 0.00023 21.7 0.9 0.6 10.8 0.1 2.5 2 0 0 2 2 2 2 Aspartyl protease gag-asp_proteas PF13975.6 RKO94801.1 - 0.002 18.7 0.8 2.9 8.5 0.1 2.6 2 0 0 2 2 2 2 gag-polyprotein putative aspartyl protease TAXi_N PF14543.6 RKO94801.1 - 0.021 15.1 2.3 0.071 13.3 0.2 2.4 1 1 1 2 2 2 0 Xylanase inhibitor N-terminal Asp PF00026.23 RKO94802.1 - 8.2e-21 74.7 0.4 1.4e-19 70.7 0.0 2.9 2 1 0 2 2 2 1 Eukaryotic aspartyl protease RRM_1 PF00076.22 RKO94804.1 - 5.4e-16 58.2 0.1 6.6e-16 57.9 0.1 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ADK PF00406.22 RKO94807.1 - 2.9e-40 137.8 0.3 3.1e-11 43.6 0.0 6.6 4 3 0 4 4 4 4 Adenylate kinase AAA_17 PF13207.6 RKO94807.1 - 1.8e-28 99.7 0.0 4.8e-06 27.0 0.0 6.4 4 2 0 4 4 4 4 AAA domain FAP206 PF12018.8 RKO94807.1 - 2.3e-15 56.9 0.1 0.00058 19.5 0.0 4.5 4 0 0 4 4 4 4 Domain of unknown function AAA_18 PF13238.6 RKO94807.1 - 2.8e-13 50.5 0.0 0.002 18.7 0.0 5.5 4 2 0 4 4 4 2 AAA domain AAA PF00004.29 RKO94807.1 - 9.9e-13 48.7 0.1 0.0013 19.1 0.0 4.6 4 0 0 4 4 4 3 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 RKO94807.1 - 1.7e-12 47.7 0.0 0.00019 21.6 0.0 5.1 5 0 0 5 5 5 2 AAA domain AAA_24 PF13479.6 RKO94807.1 - 3e-10 40.2 0.0 0.23 11.1 0.0 4.5 4 0 0 4 4 4 2 AAA domain AAA_28 PF13521.6 RKO94807.1 - 6.4e-10 39.5 4.9 0.028 14.7 0.0 5.4 5 0 0 5 5 4 2 AAA domain AAA_22 PF13401.6 RKO94807.1 - 6.6e-10 39.4 0.0 0.0032 17.8 0.0 4.5 4 0 0 4 4 4 2 AAA domain NACHT PF05729.12 RKO94807.1 - 1.4e-07 31.5 0.2 0.0023 17.9 0.0 3.4 3 0 0 3 3 3 1 NACHT domain Hydin_ADK PF17213.3 RKO94807.1 - 6.5e-07 29.8 3.6 0.11 12.8 0.0 4.1 4 0 0 4 4 3 2 Hydin Adenylate kinase-like domain RNA_helicase PF00910.22 RKO94807.1 - 8.9e-07 29.3 0.1 0.1 13.0 0.0 5.2 6 0 0 6 6 4 1 RNA helicase AAA_16 PF13191.6 RKO94807.1 - 1.1e-06 29.2 0.0 0.099 13.0 0.0 4.2 5 0 0 5 5 3 1 AAA ATPase domain YHS PF04945.13 RKO94807.1 - 8e-06 25.9 0.7 11 6.2 0.0 4.6 4 0 0 4 4 4 0 YHS domain Mg_chelatase PF01078.21 RKO94807.1 - 3.8e-05 23.2 0.0 0.55 9.6 0.0 3.6 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.12 RKO94807.1 - 3.9e-05 23.0 0.0 0.029 13.6 0.0 3.6 4 0 0 4 4 3 1 Zeta toxin AAA_5 PF07728.14 RKO94807.1 - 4.8e-05 23.4 3.4 0.034 14.2 0.0 4.4 5 0 0 5 5 4 1 AAA domain (dynein-related subfamily) SKI PF01202.22 RKO94807.1 - 4.9e-05 23.5 0.1 0.042 14.0 0.0 4.2 5 0 0 5 5 3 1 Shikimate kinase ABC_tran PF00005.27 RKO94807.1 - 8.4e-05 23.1 1.1 0.15 12.5 0.0 4.1 5 0 0 5 5 3 1 ABC transporter KTI12 PF08433.10 RKO94807.1 - 0.00016 21.2 0.1 6.8 6.0 0.0 4.4 4 0 0 4 4 4 0 Chromatin associated protein KTI12 AAA_25 PF13481.6 RKO94807.1 - 0.00064 19.3 2.9 0.2 11.2 0.0 3.9 4 0 0 4 4 4 1 AAA domain Thymidylate_kin PF02223.17 RKO94807.1 - 0.00087 19.0 0.1 5.7 6.6 0.0 4.3 4 0 0 4 4 4 0 Thymidylate kinase IstB_IS21 PF01695.17 RKO94807.1 - 0.00088 19.0 0.1 0.72 9.6 0.0 3.7 4 0 0 4 4 4 1 IstB-like ATP binding protein RuvB_N PF05496.12 RKO94807.1 - 0.00099 18.9 2.1 0.23 11.2 0.0 4.0 4 0 0 4 4 4 1 Holliday junction DNA helicase RuvB P-loop domain AAA_19 PF13245.6 RKO94807.1 - 0.0016 18.8 0.0 2.4 8.5 0.0 3.4 3 0 0 3 3 3 1 AAA domain NTPase_1 PF03266.15 RKO94807.1 - 0.0018 18.2 0.2 0.083 12.8 0.0 3.3 3 0 0 3 3 3 1 NTPase SRP54 PF00448.22 RKO94807.1 - 0.0023 17.6 0.0 0.39 10.3 0.0 3.3 3 0 0 3 3 3 1 SRP54-type protein, GTPase domain AAA_7 PF12775.7 RKO94807.1 - 0.0025 17.4 0.0 0.69 9.4 0.0 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region SRPRB PF09439.10 RKO94807.1 - 0.0027 17.2 0.0 12 5.3 0.0 3.4 3 0 0 3 3 3 0 Signal recognition particle receptor beta subunit Ploopntkinase3 PF18751.1 RKO94807.1 - 0.0028 17.6 0.0 0.23 11.3 0.0 3.3 4 0 0 4 4 3 1 P-loop Nucleotide Kinase3 Rad17 PF03215.15 RKO94807.1 - 0.0042 17.0 0.0 7.9 6.4 0.0 3.3 3 0 0 3 3 3 0 Rad17 P-loop domain Dpy-30 PF05186.13 RKO94807.1 - 0.0044 16.7 0.2 0.015 15.0 0.2 1.9 1 1 0 1 1 1 1 Dpy-30 motif AAA_14 PF13173.6 RKO94807.1 - 0.0046 17.0 0.0 2.6 8.1 0.0 4.1 4 0 0 4 4 4 1 AAA domain PduV-EutP PF10662.9 RKO94807.1 - 0.0056 16.4 0.0 4 7.2 0.0 3.5 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation DnaB_C PF03796.15 RKO94807.1 - 0.0058 16.0 0.1 1.2 8.4 0.0 2.9 3 0 0 3 3 3 1 DnaB-like helicase C terminal domain CoaE PF01121.20 RKO94807.1 - 0.0074 16.0 0.0 3.7 7.2 0.0 3.1 3 0 0 3 3 3 0 Dephospho-CoA kinase Viral_helicase1 PF01443.18 RKO94807.1 - 0.008 15.9 0.0 0.15 11.8 0.0 2.5 3 0 0 3 3 2 1 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.6 RKO94807.1 - 0.0091 15.7 0.0 1.1 8.9 0.0 2.8 3 0 0 3 3 2 1 AAA domain TniB PF05621.11 RKO94807.1 - 0.0094 15.4 0.0 2.1 7.7 0.0 3.2 3 0 0 3 3 3 1 Bacterial TniB protein AAA_23 PF13476.6 RKO94807.1 - 0.012 16.1 0.6 1.9 9.0 0.0 3.3 4 0 0 4 4 3 0 AAA domain Cytidylate_kin2 PF13189.6 RKO94807.1 - 0.013 15.7 0.3 0.38 10.9 0.0 3.3 4 0 0 4 4 2 0 Cytidylate kinase-like family MMR_HSR1 PF01926.23 RKO94807.1 - 0.017 15.2 0.0 8.7 6.5 0.0 3.5 4 0 0 4 4 2 0 50S ribosome-binding GTPase NB-ARC PF00931.22 RKO94807.1 - 0.018 14.3 0.0 0.17 11.1 0.0 2.5 3 0 0 3 3 3 0 NB-ARC domain G-alpha PF00503.20 RKO94807.1 - 0.022 13.9 0.0 22 4.0 0.0 3.7 3 1 0 4 4 4 0 G-protein alpha subunit DUF2075 PF09848.9 RKO94807.1 - 0.033 13.4 0.0 1.7 7.8 0.0 2.8 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2075) cobW PF02492.19 RKO94807.1 - 0.041 13.5 0.1 13 5.3 0.0 3.4 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain AAA_29 PF13555.6 RKO94807.1 - 0.044 13.5 0.0 5.5 6.8 0.0 3.4 4 0 0 4 4 2 0 P-loop containing region of AAA domain MobB PF03205.14 RKO94807.1 - 0.046 13.6 0.3 14 5.6 0.0 3.0 3 0 0 3 3 2 0 Molybdopterin guanine dinucleotide synthesis protein B Roc PF08477.13 RKO94807.1 - 0.072 13.3 0.2 54 4.0 0.0 3.8 4 0 0 4 4 3 0 Ras of Complex, Roc, domain of DAPkinase ATPase PF06745.13 RKO94807.1 - 0.081 12.3 0.0 1.7 8.0 0.0 2.8 3 0 0 3 3 3 0 KaiC Cytidylate_kin PF02224.18 RKO94807.1 - 0.087 12.5 0.0 10 5.8 0.0 2.8 3 0 0 3 3 2 0 Cytidylate kinase AAA_11 PF13086.6 RKO94807.1 - 0.098 12.4 3.5 8.3 6.1 0.0 3.3 3 0 0 3 3 3 0 AAA domain ATP_bind_1 PF03029.17 RKO94807.1 - 0.13 12.0 0.0 55 3.4 0.0 3.5 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein TsaE PF02367.17 RKO94807.1 - 0.16 11.9 0.0 3.2 7.8 0.0 2.9 3 0 0 3 3 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Nop14 PF04147.12 RKO94807.1 - 0.96 7.6 14.5 1.5 7.0 14.5 1.1 1 0 0 1 1 1 0 Nop14-like family FYDLN_acid PF09538.10 RKO94807.1 - 1.2 9.8 14.9 3 8.6 14.9 1.6 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) CDC45 PF02724.14 RKO94807.1 - 3.8 5.7 13.0 5.8 5.1 13.0 1.1 1 0 0 1 1 1 0 CDC45-like protein FAM184 PF15665.5 RKO94808.1 - 1.4e-07 31.5 4.6 1.4e-07 31.5 4.6 7.8 2 2 3 7 7 7 5 Family with sequence similarity 184, A and B DNA_Packaging_2 PF11123.8 RKO94808.1 - 0.013 15.7 0.2 0.097 12.9 0.2 2.6 1 0 0 1 1 1 0 DNA packaging protein Baculo_PEP_C PF04513.12 RKO94808.1 - 0.019 15.0 0.9 0.019 15.0 0.9 9.4 4 2 5 9 9 9 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF5092 PF17010.5 RKO94809.1 - 1.7e-23 83.3 0.0 6.5e-14 52.2 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF5092) IFP_35_N PF07334.13 RKO94810.1 - 2.3 8.3 5.4 13 5.9 0.2 2.8 1 1 1 2 2 2 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus D5_N PF08706.11 RKO94813.1 - 4.8e-05 23.7 0.0 0.00014 22.2 0.0 1.7 2 0 0 2 2 2 1 D5 N terminal like SBP_bac_3 PF00497.20 RKO94813.1 - 0.013 15.0 0.2 0.022 14.2 0.2 1.4 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 Importin_rep_6 PF18829.1 RKO94813.1 - 0.026 14.7 0.1 0.046 13.9 0.1 1.5 1 0 0 1 1 1 0 Importin repeat 6 UBA_2 PF08587.11 RKO94813.1 - 0.029 14.5 0.1 0.095 12.8 0.0 1.9 2 0 0 2 2 2 0 Ubiquitin associated domain (UBA) Olduvai PF06758.13 RKO94814.1 - 0.015 15.6 1.6 0.045 14.0 0.4 2.3 3 0 0 3 3 3 0 Olduvai domain LRR_4 PF12799.7 RKO94818.1 - 0.037 14.5 0.7 0.12 12.9 0.7 1.9 1 1 0 1 1 1 0 Leucine Rich repeats (2 copies) Helo_like_N PF17111.5 RKO94819.1 - 0.014 14.8 0.6 0.78 9.1 0.1 2.1 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins Hint PF01079.20 RKO94819.1 - 0.026 14.0 0.0 0.034 13.6 0.0 1.1 1 0 0 1 1 1 0 Hint module PhoLip_ATPase_C PF16212.5 RKO94826.1 - 3.1e-76 256.4 19.0 3.1e-76 256.4 19.0 1.7 2 0 0 2 2 2 1 Phospholipid-translocating P-type ATPase C-terminal PhoLip_ATPase_N PF16209.5 RKO94826.1 - 3.4e-22 77.9 2.2 9e-22 76.5 2.2 1.8 1 0 0 1 1 1 1 Phospholipid-translocating ATPase N-terminal Cation_ATPase PF13246.6 RKO94826.1 - 9.7e-14 51.2 0.0 6.2e-13 48.7 0.0 2.1 2 0 0 2 2 2 1 Cation transport ATPase (P-type) Hydrolase PF00702.26 RKO94826.1 - 3e-11 44.0 0.6 0.00037 20.8 0.2 3.2 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.20 RKO94826.1 - 0.00061 19.4 0.0 0.0026 17.3 0.0 2.1 1 1 0 1 1 1 1 E1-E2 ATPase Hydrolase_3 PF08282.12 RKO94826.1 - 0.00062 19.6 0.1 0.0013 18.5 0.1 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF5466 PF17554.2 RKO94826.1 - 8 6.8 6.8 0.32 11.2 0.2 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5466) F-box-like PF12937.7 RKO94827.1 - 7.9e-09 35.3 4.6 6.3e-08 32.4 0.8 3.0 3 0 0 3 3 3 1 F-box-like F-box PF00646.33 RKO94827.1 - 0.00015 21.5 0.4 0.018 14.9 0.1 2.6 2 0 0 2 2 2 2 F-box domain AAA_6 PF12774.7 RKO94828.1 - 1.8e-159 530.0 0.0 4.9e-159 528.6 0.0 1.8 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region DHC_N2 PF08393.13 RKO94828.1 - 1.3e-141 472.4 13.2 1.3e-141 472.4 13.2 3.2 3 0 0 3 3 3 1 Dynein heavy chain, N-terminal region 2 Dynein_C PF18199.1 RKO94828.1 - 1.5e-118 395.5 0.0 8.9e-118 393.0 0.0 2.3 2 0 0 2 2 2 1 Dynein heavy chain C-terminal domain AAA_8 PF12780.7 RKO94828.1 - 1.2e-105 352.5 0.3 2.2e-103 345.1 0.0 3.4 3 0 0 3 3 3 1 P-loop containing dynein motor region D4 AAA_9 PF12781.7 RKO94828.1 - 1.1e-91 305.9 2.6 1.1e-91 305.9 2.6 2.4 3 0 0 3 3 3 1 ATP-binding dynein motor region AAA_7 PF12775.7 RKO94828.1 - 1.1e-80 269.4 0.1 1.7e-78 262.3 0.0 2.9 3 0 0 3 3 3 1 P-loop containing dynein motor region AAA_lid_11 PF18198.1 RKO94828.1 - 9.6e-64 214.1 0.1 3.1e-63 212.5 0.0 2.0 2 0 0 2 2 1 1 Dynein heavy chain AAA lid domain MT PF12777.7 RKO94828.1 - 1.6e-50 172.1 7.6 1.6e-50 172.1 7.6 1.6 2 0 0 2 2 1 1 Microtubule-binding stalk of dynein motor Dynein_heavy PF03028.15 RKO94828.1 - 3.7e-45 152.9 0.0 6.6e-43 145.6 0.0 3.2 2 0 0 2 2 2 1 Dynein heavy chain region D6 P-loop domain Pkinase PF00069.25 RKO94828.1 - 2.5e-32 112.3 0.0 6e-32 111.0 0.0 1.6 1 0 0 1 1 1 1 Protein kinase domain Dynein_AAA_lid PF17852.1 RKO94828.1 - 1e-30 106.5 0.0 7.7e-30 103.6 0.0 2.7 1 0 0 1 1 1 1 Dynein heavy chain AAA lid domain Pkinase_Tyr PF07714.17 RKO94828.1 - 2.3e-22 79.5 0.0 7.2e-22 77.9 0.0 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase AAA_5 PF07728.14 RKO94828.1 - 2.7e-19 69.6 0.0 0.00014 21.9 0.0 5.5 4 1 0 4 4 4 3 AAA domain (dynein-related subfamily) AAA_lid_1 PF17857.1 RKO94828.1 - 4e-17 62.3 0.1 1.5e-16 60.4 0.1 2.1 1 0 0 1 1 1 1 AAA+ lid domain AAA PF00004.29 RKO94828.1 - 0.0095 16.4 5.2 1.9 8.9 0.1 4.7 6 0 0 6 6 4 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 RKO94828.1 - 0.02 15.2 0.1 53 4.1 0.0 4.3 4 0 0 4 4 4 0 AAA domain AAA_18 PF13238.6 RKO94828.1 - 0.027 15.0 1.4 0.41 11.2 0.0 3.5 3 0 0 3 3 3 0 AAA domain AAA_16 PF13191.6 RKO94828.1 - 0.042 14.2 5.2 4.2 7.7 0.0 5.5 5 0 0 5 5 5 0 AAA ATPase domain AAA_24 PF13479.6 RKO94828.1 - 0.047 13.4 0.4 14 5.3 0.1 3.3 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 RKO94828.1 - 0.049 14.0 0.0 5.5 7.4 0.0 3.1 3 0 0 3 3 2 0 RNA helicase AAA_30 PF13604.6 RKO94828.1 - 0.078 12.7 0.4 4.1 7.1 0.3 3.1 2 0 0 2 2 2 0 AAA domain ASH PF15780.5 RKO94829.1 - 3.8e-54 180.9 37.3 0.00021 21.4 0.1 24.9 24 2 1 25 25 25 13 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Motile_Sperm PF00635.26 RKO94829.1 - 1.2e-23 83.1 0.4 0.014 15.2 0.0 15.0 15 0 0 15 15 15 5 MSP (Major sperm protein) domain PapD-like PF14874.6 RKO94829.1 - 2.5e-20 72.6 4.2 0.51 10.5 0.1 13.4 15 0 0 15 15 15 4 Flagellar-associated PapD-like DUF1573 PF07610.11 RKO94829.1 - 1.4e-16 60.3 10.8 0.43 10.6 0.0 18.7 26 0 0 26 26 26 2 Protein of unknown function (DUF1573) Hydin_ADK PF17213.3 RKO94829.1 - 2.1e-13 51.0 0.3 5.7e-06 26.7 0.1 3.1 2 0 0 2 2 2 2 Hydin Adenylate kinase-like domain MYCBPAP PF14646.6 RKO94829.1 - 3e-10 39.6 3.1 0.15 11.0 0.0 8.6 9 0 0 9 9 9 3 MYCBP-associated protein family TMEM131_like PF12371.8 RKO94829.1 - 3.8e-07 30.3 9.3 4.3 7.7 0.0 9.9 9 0 0 9 9 9 2 Transmembrane protein 131-like ADK PF00406.22 RKO94829.1 - 0.092 12.9 0.3 16 5.5 0.0 2.4 2 0 0 2 2 2 0 Adenylate kinase AAA PF00004.29 RKO94829.1 - 0.14 12.6 0.0 0.3 11.5 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF4840 PF16128.5 RKO94829.1 - 4.4 7.4 5.2 6.8 6.7 0.0 4.2 6 0 0 6 6 6 0 Domain of unknown function (DUF4840) DRIM PF07539.12 RKO94831.1 - 1.7e-171 571.7 2.3 2.7e-170 567.7 0.1 2.2 2 0 0 2 2 2 2 Down-regulated in metastasis BP28CT PF08146.12 RKO94831.1 - 0.00049 20.0 0.1 0.0028 17.5 0.0 2.3 2 0 0 2 2 2 1 BP28CT (NUC211) domain HEAT_EZ PF13513.6 RKO94831.1 - 0.1 13.2 2.9 6.4 7.4 0.1 4.9 5 0 0 5 5 5 0 HEAT-like repeat MMS19_C PF12460.8 RKO94831.1 - 0.23 10.5 1.9 15 4.5 0.7 3.4 3 0 0 3 3 3 0 RNAPII transcription regulator C-terminal Sigma70_ner PF04546.13 RKO94831.1 - 1.5 8.7 10.0 12 5.7 2.8 3.4 3 0 0 3 3 3 0 Sigma-70, non-essential region Cep57_CLD PF14073.6 RKO94833.1 - 3.8 7.5 8.8 9.9 6.1 3.3 2.3 1 1 1 2 2 2 0 Centrosome localisation domain of Cep57 YabA PF06156.13 RKO94833.1 - 8.4 7.1 5.8 91 3.8 0.2 3.4 3 1 0 3 3 3 0 Initiation control protein YabA Shadoo PF14999.6 RKO94837.1 - 0.74 9.9 15.7 1.4 9.0 15.4 1.7 1 1 0 1 1 1 0 Shadow of prion protein, neuroprotective FoP_duplication PF13865.6 RKO94837.1 - 2 9.0 16.1 4 8.1 1.9 2.3 2 0 0 2 2 2 0 C-terminal duplication domain of Friend of PRMT1 Metallophos PF00149.28 RKO94838.1 - 1.1e-32 114.3 0.0 1.5e-32 113.8 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase TAF1_subA PF14929.6 RKO94838.1 - 0.19 11.1 0.0 0.23 10.8 0.0 1.2 1 0 0 1 1 1 0 TAF RNA Polymerase I subunit A DNA_pol_B PF00136.21 RKO94841.1 - 2.3e-86 290.4 4.2 5.6e-86 289.1 4.2 1.5 1 1 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 RKO94841.1 - 2.9e-22 79.3 3.0 5.1e-22 78.5 3.0 1.4 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_2 PF03175.13 RKO94841.1 - 4.7e-07 29.0 3.7 6.7e-06 25.2 0.6 2.4 2 0 0 2 2 2 2 DNA polymerase type B, organellar and viral DNA_pol_B_exo2 PF10108.9 RKO94841.1 - 0.001 18.8 0.7 0.0094 15.7 0.7 2.2 1 1 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DNA_pol_B_3 PF08408.10 RKO94841.1 - 0.0044 17.2 3.1 0.047 13.9 0.5 2.7 2 0 0 2 2 2 1 DNA polymerase family B viral insert RNase_H_2 PF13482.6 RKO94841.1 - 0.0081 16.2 1.5 0.075 13.0 1.5 2.4 1 1 0 1 1 1 1 RNase_H superfamily MC1 PF05854.11 RKO94842.1 - 0.0016 18.7 0.1 0.0026 18.0 0.1 1.3 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 CdiI PF07262.11 RKO94842.1 - 0.021 14.6 0.1 0.028 14.2 0.1 1.2 1 0 0 1 1 1 0 CDI immunity protein FAD_binding_6 PF00970.24 RKO94842.1 - 0.048 14.0 0.1 0.35 11.2 0.1 2.1 1 1 0 1 1 1 0 Oxidoreductase FAD-binding domain Dicer_dimer PF03368.14 RKO94842.1 - 0.13 12.4 0.0 0.3 11.3 0.0 1.6 1 0 0 1 1 1 0 Dicer dimerisation domain Pkinase PF00069.25 RKO94843.1 - 1.7e-05 24.4 0.0 3.7e-05 23.2 0.0 1.6 1 0 0 1 1 1 1 Protein kinase domain ATP_bind_1 PF03029.17 RKO94844.1 - 1.7e-54 185.2 0.1 1.8e-54 185.0 0.1 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein SRP54 PF00448.22 RKO94844.1 - 1.2e-08 34.9 0.3 3.9e-05 23.4 0.0 2.3 2 1 0 2 2 2 2 SRP54-type protein, GTPase domain AAA_31 PF13614.6 RKO94844.1 - 2.2e-05 24.5 0.1 0.076 12.9 0.0 2.3 1 1 0 2 2 2 2 AAA domain CbiA PF01656.23 RKO94844.1 - 7e-05 22.9 0.0 7.1e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain cobW PF02492.19 RKO94844.1 - 0.00015 21.4 1.4 0.0012 18.5 1.4 2.0 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MipZ PF09140.11 RKO94844.1 - 0.0002 20.7 0.0 0.00027 20.3 0.0 1.2 1 0 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 RKO94844.1 - 0.00025 20.4 0.0 0.00067 18.9 0.0 1.6 2 0 0 2 2 2 1 Anion-transporting ATPase MMR_HSR1 PF01926.23 RKO94844.1 - 0.00044 20.3 0.1 0.0015 18.6 0.1 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase MeaB PF03308.16 RKO94844.1 - 0.0009 18.3 0.0 0.0017 17.4 0.0 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 RKO94844.1 - 0.0011 19.4 0.0 0.0012 19.2 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain KTI12 PF08433.10 RKO94844.1 - 0.0014 18.1 0.0 0.0038 16.7 0.0 1.7 2 0 0 2 2 2 1 Chromatin associated protein KTI12 AAA_22 PF13401.6 RKO94844.1 - 0.0021 18.3 0.0 0.0038 17.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 RKO94844.1 - 0.0082 15.9 0.1 0.012 15.4 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 RKO94844.1 - 0.015 15.5 0.0 0.02 15.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain MobB PF03205.14 RKO94844.1 - 0.032 14.1 0.1 0.048 13.6 0.1 1.5 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_30 PF13604.6 RKO94844.1 - 0.034 13.9 0.0 0.052 13.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain CBP_BcsQ PF06564.12 RKO94844.1 - 0.037 13.5 0.0 0.37 10.2 0.0 2.0 1 1 0 2 2 2 0 Cellulose biosynthesis protein BcsQ Roc PF08477.13 RKO94844.1 - 0.046 13.9 0.1 6.1 7.1 0.0 2.1 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase CLP1_P PF16575.5 RKO94844.1 - 0.051 13.4 0.0 9.1 6.0 0.0 2.1 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_14 PF13173.6 RKO94844.1 - 0.053 13.6 0.1 0.12 12.4 0.1 1.8 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 RKO94844.1 - 0.055 13.4 0.1 1.5 8.7 0.1 2.1 2 0 0 2 2 2 0 NTPase NACHT PF05729.12 RKO94844.1 - 0.056 13.4 0.1 0.098 12.6 0.1 1.4 1 0 0 1 1 1 0 NACHT domain PRK PF00485.18 RKO94844.1 - 0.093 12.5 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family APS_kinase PF01583.20 RKO94844.1 - 0.098 12.5 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase ATPase_2 PF01637.18 RKO94844.1 - 0.1 12.5 0.0 0.2 11.5 0.0 1.4 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_PrkA PF08298.11 RKO94844.1 - 0.11 11.4 0.0 0.16 10.8 0.0 1.4 1 1 0 1 1 1 0 PrkA AAA domain DUF1629 PF07791.11 RKO94845.1 - 0.13 12.4 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1629) DUF378 PF04070.12 RKO94846.1 - 2.1e-06 27.5 5.9 4.3e-06 26.5 5.9 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF378) DUF1980 PF09323.10 RKO94846.1 - 0.0075 16.2 2.1 0.0096 15.9 0.7 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1980) CENP-B_dimeris PF09026.10 RKO94847.1 - 0.017 15.5 4.4 0.032 14.6 4.4 1.5 1 0 0 1 1 1 0 Centromere protein B dimerisation domain DUF3402 PF11882.8 RKO94847.1 - 0.073 12.2 6.7 0.093 11.8 6.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3402) DNA_pol_phi PF04931.13 RKO94847.1 - 0.23 9.5 7.2 0.31 9.1 7.2 1.2 1 0 0 1 1 1 0 DNA polymerase phi DUF4637 PF15470.6 RKO94847.1 - 7.4 6.3 10.6 6.4 6.5 0.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4637) Y_Y_Y PF07495.13 RKO94849.1 - 2.9e-05 23.9 0.1 7.1 6.7 0.0 6.0 6 0 0 6 6 6 1 Y_Y_Y domain YidC_periplas PF14849.6 RKO94849.1 - 0.0001 22.3 0.0 8.2 6.2 0.0 5.5 6 2 1 8 8 8 2 YidC periplasmic domain Hyaluronidase_1 PF07212.11 RKO94849.1 - 0.0017 17.7 4.5 7.5 5.7 0.0 6.3 7 1 1 8 8 8 2 Hyaluronidase protein (HylP) Invasin_D3 PF09134.10 RKO94849.1 - 0.011 16.0 0.1 4.1 7.8 0.0 4.0 3 0 0 3 3 3 0 Invasin, domain 3 fn3_3 PF14686.6 RKO94849.1 - 0.014 15.2 0.2 5.2 6.9 0.0 3.5 3 0 0 3 3 3 0 Polysaccharide lyase family 4, domain II Lbh PF15317.6 RKO94849.1 - 0.12 13.2 0.3 4 8.3 0.0 3.3 3 0 0 3 3 3 0 Cardiac transcription factor regulator, Developmental protein SHIPPO-rpt PF07004.12 RKO94849.1 - 0.15 13.1 2.5 4.8 8.3 0.1 3.6 3 0 0 3 3 3 0 Sperm-tail PG-rich repeat Capsid_N PF16903.5 RKO94851.1 - 1e-24 87.3 0.1 2.4e-24 86.1 0.1 1.5 1 0 0 1 1 1 1 Major capsid protein N-terminus Capsid_NCLDV PF04451.12 RKO94851.1 - 1.6e-20 73.7 0.1 3.1e-20 72.8 0.1 1.5 1 0 0 1 1 1 1 Large eukaryotic DNA virus major capsid protein End_tail_spike PF12219.8 RKO94852.1 - 7.6e-05 22.8 0.1 7.6e-05 22.8 0.1 2.8 3 0 0 3 3 3 1 Catalytic domain of bacteriophage endosialidase HATPase_c PF02518.26 RKO94854.1 - 1.6e-28 99.5 0.1 3.5e-27 95.1 0.0 2.2 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 RKO94854.1 - 1.1e-18 67.0 0.1 1.1e-17 63.8 0.0 2.2 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 RKO94854.1 - 0.066 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Glyco_hydro_18 PF00704.28 RKO94855.1 - 9.4e-64 216.1 0.4 1.2e-63 215.7 0.4 1.0 1 0 0 1 1 1 1 Glycosyl hydrolases family 18 MRP-S32 PF10210.9 RKO94855.1 - 0.095 13.3 0.0 0.19 12.3 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S32 FAS_N PF17828.1 RKO94857.1 - 0.18 11.8 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain in fatty acid synthase subunit beta TTL PF03133.15 RKO94858.1 - 4.6e-19 68.6 1.0 1.6e-18 66.8 1.0 1.8 1 1 0 1 1 1 1 Tubulin-tyrosine ligase family Ribonuc_red_sm PF00268.21 RKO94859.1 - 2.7e-77 260.0 5.1 1.7e-74 250.8 5.1 2.1 1 1 0 1 1 1 1 Ribonucleotide reductase, small chain Thymidylat_synt PF00303.19 RKO94860.1 - 3.1e-88 295.4 0.0 3.6e-88 295.2 0.0 1.0 1 0 0 1 1 1 1 Thymidylate synthase # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Blyttiomyces_helicus-Blyhe1/GCA_003614705.1_Blyhe1_protein.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Blyttiomyces_helicus-Blyhe1/GCA_003614705.1_Blyhe1_protein.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Blyttiomyces_helicus-Blyhe1/GCA_003614705.1_Blyhe1_protein.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Blyttiomyces_helicus-Blyhe1/GCA_003614705.1_Blyhe1_protein.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 17:54:09 2019 # [ok]