### /oak/stanford/groups/akundaje/marinovg/programs/STAR-2.5.3a/bin/Linux_x86_64_static/STAR   --runMode genomeGenerate   --runThreadN 8   --genomeDir /oak/stanford/groups/akundaje/marinovg/genomes/Dinoflagellata/Symbiodinium_microadriaticum_v1.0/STAR   --genomeFastaFiles /oak/stanford/groups/akundaje/marinovg/genomes/Dinoflagellata/Symbiodinium_microadriaticum_v1.0/sequence/Smic.genome.scaffold.final.fa      --genomeChrBinNbits 16   --limitSjdbInsertNsj 2000000   --sjdbGTFfile /oak/stanford/groups/akundaje/marinovg/genomes/Dinoflagellata/Symbiodinium_microadriaticum_v1.0/Smic.genome.annotation.gtf   --sjdbOverhang 99
versionGenome	20201
genomeFastaFiles	/oak/stanford/groups/akundaje/marinovg/genomes/Dinoflagellata/Symbiodinium_microadriaticum_v1.0/sequence/Smic.genome.scaffold.final.fa 
genomeSAindexNbases	14
genomeChrBinNbits	16
genomeSAsparseD	1
sjdbOverhang	99
sjdbFileChrStartEnd	- 
sjdbGTFfile	/oak/stanford/groups/akundaje/marinovg/genomes/Dinoflagellata/Symbiodinium_microadriaticum_v1.0/Smic.genome.annotation.gtf
sjdbGTFchrPrefix	-
sjdbGTFfeatureExon	exon
sjdbGTFtagExonParentTranscript	transcript_id
sjdbGTFtagExonParentGene	gene_id
sjdbInsertSave	Basic
genomeFileSizes	1548636337 7823944602