#Protein	Length	Domain	Domain_description	score	bias	c-Evalue	i-Evalue	hmmfrom	hmmto	alifrom	alito	envfrom 	envto	acc
gi|297660607|ref|YP_003710318.1|	324	Phage_integrase	Phage	-1.2	0.0	0.26	1.6e+03	66	105	98	132	74	156	0.47
gi|297660607|ref|YP_003710318.1|	324	Phage_integrase	Phage	84.3	0.1	1.4e-27	8.2e-24	6	169	153	310	146	313	0.91
gi|297660607|ref|YP_003710318.1|	324	CPSase_L_D3	Carbamoyl-phosphate	-2.4	0.0	0.96	5.8e+03	51	52	88	89	42	116	0.54
gi|297660607|ref|YP_003710318.1|	324	CPSase_L_D3	Carbamoyl-phosphate	-0.0	0.1	0.18	1.1e+03	92	92	187	187	136	233	0.54
gi|297660607|ref|YP_003710318.1|	324	CPSase_L_D3	Carbamoyl-phosphate	14.2	0.0	6.8e-06	0.04	57	104	273	320	238	323	0.76
gi|297660607|ref|YP_003710318.1|	324	RHH_3	Ribbon-helix-helix	11.4	0.1	4.1e-05	0.24	8	33	37	66	35	71	0.79
gi|297660607|ref|YP_003710318.1|	324	RHH_3	Ribbon-helix-helix	-1.9	0.0	0.57	3.4e+03	21	38	212	229	210	231	0.50
gi|297660608|ref|YP_003710319.1|	100	Gp49	Phage	33.1	0.1	2.5e-12	4.5e-08	1	84	14	89	14	97	0.83
gi|297660609|ref|YP_003710320.1|	109	HTH_26	Cro/C1-type	1.7	0.0	0.059	3.5e+02	14	36	35	57	14	64	0.71
gi|297660609|ref|YP_003710320.1|	109	HTH_26	Cro/C1-type	12.9	0.1	1.9e-05	0.11	11	47	70	104	67	106	0.94
gi|297660609|ref|YP_003710320.1|	109	Imm49	Immunity	12.4	0.0	1.7e-05	0.1	126	172	29	77	6	105	0.72
gi|297660609|ref|YP_003710320.1|	109	Stanniocalcin	Stanniocalcin	11.4	0.0	2.4e-05	0.14	19	84	16	79	2	103	0.78
gi|297660610|ref|YP_003710321.1|	71	DDE_Tnp_IS1	IS1	31.2	0.1	3.8e-11	2.3e-07	80	125	13	60	1	67	0.79
gi|297660610|ref|YP_003710321.1|	71	rve_3	Integrase	17.6	0.1	4e-07	0.0024	17	56	22	66	10	67	0.88
gi|297660610|ref|YP_003710321.1|	71	zf-SAP30	SAP30	12.2	1.5	2.5e-05	0.15	17	57	16	67	9	71	0.73
gi|297660611|ref|YP_003710322.1|	202	DDE_Tnp_IS1	IS1	43.9	0.1	7.7e-15	2.8e-11	5	54	107	156	104	162	0.93
gi|297660611|ref|YP_003710322.1|	202	Zn_Tnp_IS1	InsA	18.7	2.7	3e-07	0.0011	7	34	4	31	1	32	0.94
gi|297660611|ref|YP_003710322.1|	202	DDE_Tnp_IS240	DDE	18.8	0.0	4.1e-07	0.0015	9	60	114	165	104	196	0.82
gi|297660611|ref|YP_003710322.1|	202	Zn-ribbon_8	Zinc	7.2	0.3	0.0015	5.4	27	38	3	15	1	16	0.75
gi|297660611|ref|YP_003710322.1|	202	Zn-ribbon_8	Zinc	3.9	0.1	0.017	61	7	22	27	44	25	51	0.76
gi|297660611|ref|YP_003710322.1|	202	zf-ISL3	zinc-finger	10.6	0.7	0.0002	0.7	3	18	3	18	2	21	0.89
gi|297660611|ref|YP_003710322.1|	202	zf-ISL3	zinc-finger	1.8	0.1	0.11	3.8e+02	2	11	25	34	24	54	0.74
gi|297660611|ref|YP_003710322.1|	202	zf-ISL3	zinc-finger	-2.6	0.0	2.7	9.6e+03	17	27	118	128	114	131	0.68
gi|297660613|ref|YP_003710324.1|	78	HTH_3	Helix-turn-helix	55.5	0.0	1.4e-18	4.2e-15	5	55	24	75	21	75	0.92
gi|297660613|ref|YP_003710324.1|	78	HTH_31	Helix-turn-helix	35.8	0.0	2.5e-12	7.6e-09	1	59	16	73	16	76	0.94
gi|297660613|ref|YP_003710324.1|	78	HTH_26	Cro/C1-type	27.4	0.0	1.1e-09	3.4e-06	9	58	28	76	19	77	0.91
gi|297660613|ref|YP_003710324.1|	78	HTH_19	Helix-turn-helix	-2.1	0.0	1.4	4.2e+03	7	16	13	22	13	23	0.79
gi|297660613|ref|YP_003710324.1|	78	HTH_19	Helix-turn-helix	18.7	0.0	4.3e-07	0.0013	8	60	25	76	18	77	0.90
gi|297660613|ref|YP_003710324.1|	78	YdaS_antitoxin	Putative	12.5	0.0	3.5e-05	0.1	7	46	28	67	24	78	0.85
gi|297660613|ref|YP_003710324.1|	78	HTH_25	Helix-turn-helix	12.4	0.0	3.7e-05	0.11	3	34	22	53	20	72	0.92
gi|297660614|ref|YP_003710325.1|	296	Ank_2	Ankyrin	9.8	0.0	0.0004	1.2	48	82	35	70	12	71	0.79
gi|297660614|ref|YP_003710325.1|	296	Ank_2	Ankyrin	-2.9	0.0	3.6	1.1e+04	66	80	105	119	101	120	0.77
gi|297660614|ref|YP_003710325.1|	296	Ank_2	Ankyrin	41.4	0.0	5.4e-14	1.6e-10	10	82	146	219	137	220	0.83
gi|297660614|ref|YP_003710325.1|	296	Ank_2	Ankyrin	0.3	0.0	0.37	1.1e+03	66	81	239	254	221	259	0.61
gi|297660614|ref|YP_003710325.1|	296	Ank_4	Ankyrin	8.4	0.0	0.0011	3.2	24	49	31	55	20	60	0.86
gi|297660614|ref|YP_003710325.1|	296	Ank_4	Ankyrin	6.6	0.0	0.0042	13	11	38	102	129	91	131	0.79
gi|297660614|ref|YP_003710325.1|	296	Ank_4	Ankyrin	7.1	0.0	0.0027	8.1	3	28	165	190	163	192	0.88
gi|297660614|ref|YP_003710325.1|	296	Ank_4	Ankyrin	16.9	0.1	2.4e-06	0.0073	4	32	193	220	190	236	0.86
gi|297660614|ref|YP_003710325.1|	296	Ank_4	Ankyrin	6.6	0.0	0.0042	12	14	30	239	255	229	264	0.89
gi|297660614|ref|YP_003710325.1|	296	Ank_3	Ankyrin	5.1	0.0	0.015	45	2	29	41	67	40	69	0.74
gi|297660614|ref|YP_003710325.1|	296	Ank_3	Ankyrin	-2.2	0.0	3.5	1.1e+04	20	30	110	119	105	119	0.81
gi|297660614|ref|YP_003710325.1|	296	Ank_3	Ankyrin	12.5	0.0	5.8e-05	0.17	4	30	165	190	163	191	0.93
gi|297660614|ref|YP_003710325.1|	296	Ank_3	Ankyrin	19.0	0.0	4.6e-07	0.0014	2	30	190	217	189	218	0.94
gi|297660614|ref|YP_003710325.1|	296	Ank_3	Ankyrin	7.3	0.0	0.0029	8.6	16	31	240	254	222	254	0.86
gi|297660614|ref|YP_003710325.1|	296	Ank_3	Ankyrin	-0.6	0.0	1	3.1e+03	14	27	279	293	275	296	0.72
gi|297660614|ref|YP_003710325.1|	296	Ank_5	Ankyrin	0.7	0.0	0.24	7.1e+02	13	24	38	49	33	61	0.68
gi|297660614|ref|YP_003710325.1|	296	Ank_5	Ankyrin	15.6	0.0	5.2e-06	0.015	6	43	154	190	150	191	0.89
gi|297660614|ref|YP_003710325.1|	296	Ank_5	Ankyrin	13.5	0.1	2.2e-05	0.067	1	44	182	218	182	221	0.93
gi|297660614|ref|YP_003710325.1|	296	Ank_5	Ankyrin	2.4	0.0	0.07	2.1e+02	29	44	239	254	237	255	0.89
gi|297660614|ref|YP_003710325.1|	296	Ank_5	Ankyrin	-2.2	0.0	2	6e+03	7	28	272	293	269	294	0.72
gi|297660614|ref|YP_003710325.1|	296	Ank	Ankyrin	-1.2	0.0	1.1	3.3e+03	2	13	41	52	40	70	0.70
gi|297660614|ref|YP_003710325.1|	296	Ank	Ankyrin	9.2	0.0	0.0006	1.8	5	27	166	189	165	190	0.88
gi|297660614|ref|YP_003710325.1|	296	Ank	Ankyrin	9.4	0.1	0.0005	1.5	5	30	193	219	191	221	0.89
gi|297660614|ref|YP_003710325.1|	296	Ank	Ankyrin	8.4	0.0	0.0011	3.2	6	29	222	254	219	255	0.80
gi|297660614|ref|YP_003710325.1|	296	Ank	Ankyrin	-1.9	0.0	1.8	5.5e+03	15	25	282	293	268	294	0.79
gi|297660614|ref|YP_003710325.1|	296	MOZART1	Mitotic-spindle	2.5	0.0	0.042	1.2e+02	18	35	100	117	98	119	0.93
gi|297660614|ref|YP_003710325.1|	296	MOZART1	Mitotic-spindle	0.5	0.0	0.18	5.5e+02	24	37	177	190	167	194	0.83
gi|297660614|ref|YP_003710325.1|	296	MOZART1	Mitotic-spindle	4.0	0.0	0.014	42	28	40	244	256	238	257	0.84
gi|297660619|ref|YP_003710330.1|	683	D5_N	D5	-3.0	0.0	0.43	7.7e+03	65	99	91	125	87	129	0.74
gi|297660619|ref|YP_003710330.1|	683	D5_N	D5	-1.8	0.5	0.18	3.3e+03	54	72	202	220	138	236	0.61
gi|297660619|ref|YP_003710330.1|	683	D5_N	D5	59.4	0.2	2.6e-20	4.7e-16	2	149	240	390	239	392	0.79
gi|297660619|ref|YP_003710330.1|	683	D5_N	D5	1.6	0.1	0.016	3e+02	21	73	582	651	550	664	0.71
gi|297660620|ref|YP_003710331.1|	525	ResIII	Type	79.3	0.0	1.4e-25	3.2e-22	2	169	2	153	1	155	0.94
gi|297660620|ref|YP_003710331.1|	525	ResIII	Type	-3.7	0.0	4.7	1.1e+04	129	140	330	341	315	365	0.74
gi|297660620|ref|YP_003710331.1|	525	Helicase_C	Helicase	2.0	0.0	0.11	2.6e+02	7	33	25	58	19	117	0.71
gi|297660620|ref|YP_003710331.1|	525	Helicase_C	Helicase	56.2	0.0	1.7e-18	3.8e-15	9	110	228	329	218	330	0.90
gi|297660620|ref|YP_003710331.1|	525	DEAD	DEAD/DEAH	31.1	0.0	8.2e-11	1.8e-07	2	171	6	156	5	161	0.71
gi|297660620|ref|YP_003710331.1|	525	ERCC3_RAD25_C	ERCC3/RAD25/XPB	14.6	0.0	6.2e-06	0.014	80	150	260	328	206	338	0.74
gi|297660620|ref|YP_003710331.1|	525	SWI2_SNF2	SWI2/SNF2	12.6	0.0	3.6e-05	0.08	94	190	88	186	15	214	0.72
gi|297660620|ref|YP_003710331.1|	525	MetW	Methionine	10.8	0.0	0.00012	0.26	48	95	59	106	26	111	0.80
gi|297660620|ref|YP_003710331.1|	525	MetW	Methionine	-3.8	0.0	3.5	7.9e+03	55	80	316	338	288	352	0.66
gi|297660620|ref|YP_003710331.1|	525	AAA_30	AAA	10.2	0.0	0.0002	0.44	30	111	49	135	48	141	0.78
gi|297660620|ref|YP_003710331.1|	525	AAA_30	AAA	-2.9	0.0	2.1	4.8e+03	46	81	235	273	225	289	0.65
gi|297660620|ref|YP_003710331.1|	525	DUF2075	Uncharacterized	10.2	0.1	0.00015	0.33	12	105	34	129	32	136	0.81
gi|297660621|ref|YP_003710332.1|	219	HTH_36	Helix-turn-helix	29.4	0.0	2.3e-10	5.8e-07	3	55	18	70	17	70	0.96
gi|297660621|ref|YP_003710332.1|	219	HTH_Crp_2	Crp-like	20.6	0.0	1.3e-07	0.00032	1	52	23	71	23	81	0.84
gi|297660621|ref|YP_003710332.1|	219	HTH_29	Winged	18.2	0.0	7.3e-07	0.0019	15	45	43	73	39	80	0.82
gi|297660621|ref|YP_003710332.1|	219	HTH_23	Homeodomain-like	-3.9	0.2	5.2	1.3e+04	34	41	25	32	22	35	0.78
gi|297660621|ref|YP_003710332.1|	219	HTH_23	Homeodomain-like	15.0	0.0	6e-06	0.015	19	45	42	68	36	70	0.91
gi|297660621|ref|YP_003710332.1|	219	HTH_23	Homeodomain-like	-3.2	0.0	3.3	8.5e+03	30	38	184	192	173	196	0.65
gi|297660621|ref|YP_003710332.1|	219	HTH_11	HTH	11.1	0.0	0.00011	0.29	19	43	44	68	41	75	0.88
gi|297660621|ref|YP_003710332.1|	219	GntR	Bacterial	10.0	0.0	0.00021	0.53	25	57	41	73	41	76	0.93
gi|297660621|ref|YP_003710332.1|	219	HTH_28	Helix-turn-helix	11.1	0.0	0.00013	0.32	16	41	44	69	33	78	0.85
gi|297660621|ref|YP_003710332.1|	219	HTH_28	Helix-turn-helix	-3.6	0.2	4.9	1.3e+04	24	33	183	192	183	193	0.77
gi|297660622|ref|YP_003710333.1|	97	HTH_17	Helix-turn-helix	15.6	0.0	7.4e-07	0.013	15	50	50	86	44	87	0.83
gi|297660623|ref|YP_003710334.1|	327	Phage_integrase	Phage	26.4	0.0	5.5e-10	4.9e-06	38	123	216	300	208	311	0.87
gi|297660623|ref|YP_003710334.1|	327	SNF2_assoc	Bacterial	14.7	1.0	1.3e-06	0.012	7	128	177	296	172	305	0.77
gi|297660625|ref|YP_003710336.1|	218	AAA_31	AAA	41.2	0.0	8.1e-14	1.6e-10	2	47	3	48	2	75	0.91
gi|297660625|ref|YP_003710336.1|	218	AAA_31	AAA	28.8	0.1	5.1e-10	1e-06	108	170	72	136	60	143	0.84
gi|297660625|ref|YP_003710336.1|	218	CbiA	CobQ/CobB/MinD/ParA	45.9	0.1	2.6e-15	5.3e-12	3	128	7	192	5	192	0.91
gi|297660625|ref|YP_003710336.1|	218	VirC1	VirC1	24.0	0.1	1e-08	2e-05	3	159	4	159	1	184	0.79
gi|297660625|ref|YP_003710336.1|	218	CBP_BcsQ	Cellulose	10.3	0.0	0.00018	0.36	4	39	5	40	1	47	0.88
gi|297660625|ref|YP_003710336.1|	218	CBP_BcsQ	Cellulose	10.2	0.0	0.00019	0.38	171	229	151	208	61	212	0.65
gi|297660625|ref|YP_003710336.1|	218	MipZ	ATPase	12.6	0.0	3.1e-05	0.062	3	45	5	47	3	54	0.90
gi|297660625|ref|YP_003710336.1|	218	MipZ	ATPase	8.4	0.1	0.00059	1.2	96	136	80	120	61	134	0.84
gi|297660625|ref|YP_003710336.1|	218	ParA	NUBPL	13.3	0.1	2.1e-05	0.042	3	41	2	40	1	46	0.92
gi|297660625|ref|YP_003710336.1|	218	ParA	NUBPL	7.8	0.2	0.00097	1.9	111	164	83	134	68	212	0.73
gi|297660625|ref|YP_003710336.1|	218	Fer4_NifH	4Fe-4S	14.3	0.0	1e-05	0.02	6	45	9	48	4	78	0.91
gi|297660625|ref|YP_003710336.1|	218	Fer4_NifH	4Fe-4S	5.7	0.0	0.0043	8.5	143	246	108	214	99	218	0.80
gi|297660625|ref|YP_003710336.1|	218	SRP54	SRP54-type	16.5	0.0	2.5e-06	0.005	11	108	13	108	4	138	0.83
gi|297660625|ref|YP_003710336.1|	218	AAA_24	AAA	14.2	0.0	1.4e-05	0.027	11	81	12	99	7	104	0.82
gi|297660626|ref|YP_003710337.1|	142	P63C	P63C	11.7	0.1	1.6e-05	0.29	20	38	28	46	16	62	0.80
gi|297660626|ref|YP_003710337.1|	142	P63C	P63C	-2.4	0.0	0.42	7.5e+03	51	69	101	119	99	133	0.63
gi|297660627|ref|YP_003710338.1|	81	PSK_trans_fac	Rv0623-like	20.6	0.5	1.3e-07	0.00056	11	61	12	66	8	81	0.69
gi|297660627|ref|YP_003710338.1|	81	Paz_1	PAZ	16.8	0.1	1.1e-06	0.0049	40	71	39	71	11	79	0.77
gi|297660627|ref|YP_003710338.1|	81	ACP_PD	Acyl	16.2	0.4	2.3e-06	0.01	37	96	9	64	2	67	0.80
gi|297660627|ref|YP_003710338.1|	81	CENP-B_N	CENP-B	12.6	0.1	1.7e-05	0.077	4	39	18	53	16	65	0.90
gi|297660628|ref|YP_003710339.1|	121	PemK_toxin	PemK-like,	85.5	0.0	1.8e-28	3.2e-24	2	106	10	112	9	117	0.85