#Protein	Length	Domain	Domain_description	score	bias	c-Evalue	i-Evalue	hmmfrom	hmmto	alifrom	alito	envfrom 	envto	acc
gi|297660607|ref|YP_003710318.1|	324	Phage_integrase	Phage	112.6	0.1	2e-36	1.5e-32	3	171	150	312	148	314	0.92
gi|297660607|ref|YP_003710318.1|	324	CPSase_L_D3	Carbamoyl-phosphate	-0.2	0.0	0.1	7.5e+02	57	92	151	186	136	198	0.68
gi|297660607|ref|YP_003710318.1|	324	CPSase_L_D3	Carbamoyl-phosphate	0.7	0.0	0.054	4e+02	59	84	197	222	181	233	0.64
gi|297660607|ref|YP_003710318.1|	324	CPSase_L_D3	Carbamoyl-phosphate	12.9	0.0	9.4e-06	0.069	62	105	276	320	243	323	0.78
gi|297660608|ref|YP_003710319.1|	100	Gp49	Phage	53.0	0.1	1.7e-18	2.5e-14	1	90	14	94	14	95	0.95
gi|297660609|ref|YP_003710320.1|	109	HTH_26	Cro/C1-type	1.7	0.0	0.038	2.8e+02	14	36	35	57	14	64	0.79
gi|297660609|ref|YP_003710320.1|	109	HTH_26	Cro/C1-type	16.2	0.1	1.2e-06	0.0087	11	47	70	104	68	105	0.94
gi|297660609|ref|YP_003710320.1|	109	CENP-B_N	CENP-B	11.2	0.0	2.5e-05	0.18	13	46	60	93	56	98	0.94
gi|297660610|ref|YP_003710321.1|	71	DDE_Tnp_IS1	IS1	31.1	0.1	2.8e-11	2e-07	80	125	13	60	1	67	0.79
gi|297660610|ref|YP_003710321.1|	71	rve_3	Integrase	17.9	0.0	2.1e-07	0.0016	16	56	21	66	9	67	0.84
gi|297660611|ref|YP_003710322.1|	202	DDE_Tnp_IS1	IS1	44.3	0.1	9.1e-15	1.7e-11	4	54	106	156	103	196	0.93
gi|297660611|ref|YP_003710322.1|	202	Zn_Tnp_IS1	InsA	22.3	2.6	3.4e-08	6.3e-05	7	35	4	31	1	32	0.95
gi|297660611|ref|YP_003710322.1|	202	DDE_Tnp_IS240	DDE	-2.9	0.0	3	5.7e+03	59	70	40	51	36	63	0.75
gi|297660611|ref|YP_003710322.1|	202	DDE_Tnp_IS240	DDE	19.1	0.0	5.1e-07	0.00094	9	71	114	176	105	198	0.76
gi|297660611|ref|YP_003710322.1|	202	DUF2387	Probable	12.1	0.3	7.3e-05	0.14	10	53	4	47	3	65	0.76
gi|297660611|ref|YP_003710322.1|	202	DNA_ligase_ZBD	NAD-dependent	11.4	0.3	0.0001	0.19	2	14	5	17	4	29	0.78
gi|297660611|ref|YP_003710322.1|	202	DNA_ligase_ZBD	NAD-dependent	-0.4	0.2	0.5	9.3e+02	1	6	27	32	27	36	0.85
gi|297660611|ref|YP_003710322.1|	202	zf-ISL3	zinc-finger	10.2	0.3	0.00032	0.58	3	18	3	18	1	21	0.90
gi|297660611|ref|YP_003710322.1|	202	zf-ISL3	zinc-finger	2.1	0.1	0.11	2e+02	3	15	26	38	24	53	0.70
gi|297660611|ref|YP_003710322.1|	202	zf-ISL3	zinc-finger	-2.8	0.0	3.5	6.5e+03	18	29	119	130	115	131	0.74
gi|297660611|ref|YP_003710322.1|	202	Rad50_zn_hook	Rad50	9.7	0.2	0.0003	0.56	10	41	16	46	7	54	0.76
gi|297660611|ref|YP_003710322.1|	202	Rad50_zn_hook	Rad50	-2.0	0.0	1.4	2.5e+03	35	50	149	164	145	165	0.68
gi|297660611|ref|YP_003710322.1|	202	zf-H2C2_2	Zinc-finger	1.7	0.3	0.19	3.5e+02	17	24	5	12	4	14	0.82
gi|297660611|ref|YP_003710322.1|	202	zf-H2C2_2	Zinc-finger	8.5	0.1	0.0014	2.6	9	25	20	36	18	36	0.92
gi|297660612|ref|YP_003710323.1|	121	RED_N	RED-like	12.0	0.7	5.9e-06	0.087	137	219	27	105	13	119	0.87
gi|297660613|ref|YP_003710324.1|	78	HTH_3	Helix-turn-helix	55.5	0.0	1.2e-18	3.5e-15	5	55	24	75	21	75	0.92
gi|297660613|ref|YP_003710324.1|	78	HTH_31	Helix-turn-helix	34.7	0.0	4.8e-12	1.4e-08	1	59	16	73	16	76	0.94
gi|297660613|ref|YP_003710324.1|	78	HTH_19	Helix-turn-helix	29.4	0.0	2e-10	5.8e-07	8	58	25	75	13	77	0.90
gi|297660613|ref|YP_003710324.1|	78	HTH_26	Cro/C1-type	27.4	0.0	9.1e-10	2.7e-06	9	58	28	76	19	77	0.92
gi|297660613|ref|YP_003710324.1|	78	HTH_25	Helix-turn-helix	13.0	0.0	1.9e-05	0.056	3	37	22	56	20	73	0.87
gi|297660614|ref|YP_003710325.1|	296	Ank_2	Ankyrin	11.3	0.0	0.00011	0.32	28	87	33	120	10	122	0.68
gi|297660614|ref|YP_003710325.1|	296	Ank_2	Ankyrin	46.1	0.0	1.5e-15	4.3e-12	5	87	141	218	100	220	0.78
gi|297660614|ref|YP_003710325.1|	296	Ank_2	Ankyrin	35.2	0.1	3.7e-12	1.1e-08	1	83	194	293	194	295	0.80
gi|297660614|ref|YP_003710325.1|	296	Ank	Ankyrin	3.6	0.0	0.021	63	2	29	41	119	40	121	0.51
gi|297660614|ref|YP_003710325.1|	296	Ank	Ankyrin	17.1	0.0	1.1e-06	0.0034	4	29	165	190	165	191	0.95
gi|297660614|ref|YP_003710325.1|	296	Ank	Ankyrin	21.4	0.0	5e-08	0.00015	5	32	193	220	190	221	0.93
gi|297660614|ref|YP_003710325.1|	296	Ank	Ankyrin	10.0	0.0	0.0002	0.6	6	30	222	254	221	256	0.81
gi|297660614|ref|YP_003710325.1|	296	Ank	Ankyrin	3.4	0.0	0.025	74	15	27	282	294	275	296	0.87
gi|297660614|ref|YP_003710325.1|	296	Ank_3	Ankyrin	4.1	0.0	0.023	68	2	25	41	64	40	69	0.83
gi|297660614|ref|YP_003710325.1|	296	Ank_3	Ankyrin	4.3	0.0	0.02	59	15	29	105	119	77	120	0.84
gi|297660614|ref|YP_003710325.1|	296	Ank_3	Ankyrin	12.8	0.0	3.5e-05	0.1	4	29	165	190	163	191	0.93
gi|297660614|ref|YP_003710325.1|	296	Ank_3	Ankyrin	23.8	0.0	1e-08	3e-05	3	30	191	218	189	218	0.94
gi|297660614|ref|YP_003710325.1|	296	Ank_3	Ankyrin	6.0	0.0	0.0057	17	16	30	240	254	221	254	0.86
gi|297660614|ref|YP_003710325.1|	296	Ank_3	Ankyrin	2.6	0.0	0.068	2e+02	14	26	281	293	276	296	0.84
gi|297660614|ref|YP_003710325.1|	296	Ank_4	Ankyrin	8.2	0.0	0.0012	3.6	25	48	32	55	26	60	0.85
gi|297660614|ref|YP_003710325.1|	296	Ank_4	Ankyrin	7.5	0.0	0.0019	5.7	13	38	104	130	91	136	0.79
gi|297660614|ref|YP_003710325.1|	296	Ank_4	Ankyrin	6.9	0.0	0.003	9	15	53	147	182	134	183	0.77
gi|297660614|ref|YP_003710325.1|	296	Ank_4	Ankyrin	8.7	0.0	0.00081	2.4	3	28	165	190	163	192	0.89
gi|297660614|ref|YP_003710325.1|	296	Ank_4	Ankyrin	17.2	0.1	1.7e-06	0.0051	4	31	193	220	191	236	0.90
gi|297660614|ref|YP_003710325.1|	296	Ank_4	Ankyrin	7.9	0.0	0.0015	4.5	14	30	239	255	223	268	0.89
gi|297660614|ref|YP_003710325.1|	296	Ank_4	Ankyrin	-3.7	0.0	5	1.5e+04	14	24	282	292	281	293	0.79
gi|297660614|ref|YP_003710325.1|	296	Ank_5	Ankyrin	-0.0	0.0	0.38	1.1e+03	45	56	37	48	32	61	0.63
gi|297660614|ref|YP_003710325.1|	296	Ank_5	Ankyrin	16.5	0.0	2.5e-06	0.0073	8	43	156	190	149	191	0.83
gi|297660614|ref|YP_003710325.1|	296	Ank_5	Ankyrin	13.0	0.0	3.1e-05	0.092	19	44	193	218	192	220	0.94
gi|297660614|ref|YP_003710325.1|	296	Ank_5	Ankyrin	1.3	0.0	0.14	4.3e+02	29	44	239	254	238	258	0.86
gi|297660614|ref|YP_003710325.1|	296	Ank_5	Ankyrin	-3.1	0.0	3.6	1.1e+04	8	28	273	293	269	294	0.63
gi|297660615|ref|YP_003710326.1|	180	Mer2	Mer2	13.0	0.9	2.3e-05	0.068	58	120	46	125	26	179	0.69
gi|297660615|ref|YP_003710326.1|	180	ATP-cone	ATP	1.5	0.1	0.13	3.9e+02	33	57	74	97	51	117	0.55
gi|297660615|ref|YP_003710326.1|	180	ATP-cone	ATP	9.4	0.0	0.00046	1.4	6	48	134	173	132	179	0.81
gi|297660615|ref|YP_003710326.1|	180	CENP-F_leu_zip	Leucine-rich	12.4	1.0	3.6e-05	0.11	44	126	28	109	16	137	0.86
gi|297660615|ref|YP_003710326.1|	180	CENP-H	Centromere	11.7	0.3	7.1e-05	0.21	5	62	24	84	21	98	0.83
gi|297660615|ref|YP_003710326.1|	180	CENP-H	Centromere	-1.9	0.0	1.2	3.6e+03	4	23	161	180	159	180	0.79
gi|297660615|ref|YP_003710326.1|	180	DUF1987	Domain	10.7	0.3	0.00012	0.34	35	85	28	76	21	84	0.70
gi|297660615|ref|YP_003710326.1|	180	DUF1987	Domain	-2.0	0.0	1	3e+03	32	57	99	126	90	132	0.70
gi|297660616|ref|YP_003710327.1|	72	Phage_Gp19	Phage	12.2	0.0	7.6e-06	0.11	23	73	11	61	5	72	0.80
gi|297660617|ref|YP_003710328.1|	147	Mu-like_Pro	Mu-like	11.9	0.0	7.1e-06	0.11	198	275	49	132	16	142	0.76
gi|297660619|ref|YP_003710330.1|	683	D5_N	D5	-1.7	0.3	0.18	2.7e+03	53	72	201	220	135	235	0.61
gi|297660619|ref|YP_003710330.1|	683	D5_N	D5	59.5	0.1	2.5e-20	3.7e-16	2	148	240	390	239	392	0.77
gi|297660619|ref|YP_003710330.1|	683	D5_N	D5	1.2	0.1	0.024	3.5e+02	29	73	590	651	552	664	0.71
gi|297660620|ref|YP_003710331.1|	525	ResIII	Type	75.3	0.0	1.7e-24	4.9e-21	2	183	2	154	1	155	0.88
gi|297660620|ref|YP_003710331.1|	525	ResIII	Type	-1.9	0.0	0.83	2.5e+03	139	154	326	341	271	366	0.74
gi|297660620|ref|YP_003710331.1|	525	Helicase_C	Helicase	55.6	0.0	1.2e-18	3.5e-15	4	77	256	329	254	330	0.96
gi|297660620|ref|YP_003710331.1|	525	DEAD	DEAD/DEAH	37.6	0.0	4.9e-13	1.5e-09	2	163	6	154	5	160	0.77
gi|297660620|ref|YP_003710331.1|	525	DEAD	DEAD/DEAH	-3.4	0.0	1.9	5.6e+03	62	94	249	284	246	291	0.65
gi|297660620|ref|YP_003710331.1|	525	DUF2075	Uncharacterized	11.6	0.0	3.2e-05	0.095	12	100	34	129	32	139	0.83
gi|297660620|ref|YP_003710331.1|	525	MetW	Methionine	10.8	0.0	7.3e-05	0.22	48	95	59	106	26	111	0.80
gi|297660620|ref|YP_003710331.1|	525	MetW	Methionine	-3.8	0.0	2.2	6.5e+03	55	80	316	338	288	352	0.66
gi|297660621|ref|YP_003710332.1|	219	HTH_36	Helix-turn-helix	26.5	0.0	2.1e-09	5.1e-06	3	55	18	70	17	70	0.90
gi|297660621|ref|YP_003710332.1|	219	HTH_29	Winged	16.4	0.0	2.9e-06	0.0071	14	50	42	78	34	91	0.85
gi|297660621|ref|YP_003710332.1|	219	HTH_23	Homeodomain-like	15.3	0.0	4.4e-06	0.011	19	45	42	68	24	71	0.93
gi|297660621|ref|YP_003710332.1|	219	HTH_Crp_2	Crp-like	14.8	0.0	6.9e-06	0.017	2	60	24	72	23	80	0.83
gi|297660621|ref|YP_003710332.1|	219	HTH_28	Helix-turn-helix	12.3	0.0	4.9e-05	0.12	18	51	46	77	33	78	0.85
gi|297660621|ref|YP_003710332.1|	219	HTH_28	Helix-turn-helix	-3.1	0.1	3.3	8.2e+03	24	33	183	192	182	193	0.80
gi|297660621|ref|YP_003710332.1|	219	MarR_2	MarR	11.0	0.0	9.8e-05	0.24	23	53	42	72	18	78	0.83
gi|297660622|ref|YP_003710333.1|	97	HTH_17	Helix-turn-helix	18.0	0.0	1.6e-07	0.0024	16	50	51	86	44	87	0.83
gi|297660623|ref|YP_003710334.1|	327	Phage_integrase	Phage	33.2	0.0	5.1e-12	3.8e-08	39	130	217	305	215	310	0.85
gi|297660623|ref|YP_003710334.1|	327	Proteasom_PSMB	Proteasome	13.9	0.0	1.6e-06	0.012	264	327	60	123	50	182	0.77
gi|297660624|ref|YP_003710335.1|	99	XRCC4	DNA	10.2	1.3	1.6e-05	0.23	192	226	3	37	1	45	0.90
gi|297660625|ref|YP_003710336.1|	218	CbiA	CobQ/CobB/MinD/ParA	72.7	0.0	1.6e-23	2.4e-20	3	166	7	157	5	183	0.78
gi|297660625|ref|YP_003710336.1|	218	AAA_31	AAA	19.4	0.0	5.1e-07	0.00075	6	44	8	46	3	55	0.88
gi|297660625|ref|YP_003710336.1|	218	AAA_31	AAA	12.7	0.0	5.9e-05	0.088	110	154	74	119	60	122	0.81
gi|297660625|ref|YP_003710336.1|	218	VirC1	VirC1	24.0	0.1	1.1e-08	1.7e-05	3	159	4	159	1	184	0.79
gi|297660625|ref|YP_003710336.1|	218	MipZ	ATPase	22.3	0.1	3.7e-08	5.4e-05	3	135	5	120	3	131	0.83
gi|297660625|ref|YP_003710336.1|	218	AAA_24	AAA	19.7	0.0	3.2e-07	0.00048	11	88	11	103	2	106	0.81
gi|297660625|ref|YP_003710336.1|	218	YhjQ	YhjQ	4.1	0.0	0.016	24	7	38	8	39	2	43	0.88
gi|297660625|ref|YP_003710336.1|	218	YhjQ	YhjQ	10.1	0.0	0.00023	0.35	101	231	67	208	61	217	0.55
gi|297660625|ref|YP_003710336.1|	218	SRP54	SRP54-type	17.8	0.0	1.2e-06	0.0017	11	106	13	106	4	136	0.85
gi|297660625|ref|YP_003710336.1|	218	Fer4_NifH	4Fe-4S	12.5	0.0	4.1e-05	0.061	8	45	11	48	5	82	0.91
gi|297660625|ref|YP_003710336.1|	218	Fer4_NifH	4Fe-4S	2.0	0.0	0.062	92	145	246	109	213	99	217	0.76
gi|297660625|ref|YP_003710336.1|	218	Lipase_GDSL_3	GDSL-like	12.7	0.0	5.1e-05	0.076	20	80	44	104	41	118	0.87
gi|297660625|ref|YP_003710336.1|	218	ATP_bind_1	Conserved	3.9	0.0	0.021	32	6	38	13	45	11	51	0.88
gi|297660625|ref|YP_003710336.1|	218	ATP_bind_1	Conserved	5.2	0.0	0.0084	12	84	103	76	96	63	108	0.70
gi|297660627|ref|YP_003710338.1|	81	DUF479	Protein	16.3	0.2	2e-06	0.0073	40	95	12	63	2	66	0.77
gi|297660627|ref|YP_003710338.1|	81	PSK_trans_fac	Rv0623-like	15.2	0.1	6.5e-06	0.024	11	68	12	68	8	79	0.66
gi|297660627|ref|YP_003710338.1|	81	CENP-B_N	CENP-B	12.8	0.1	1.5e-05	0.055	4	40	18	54	16	65	0.90
gi|297660627|ref|YP_003710338.1|	81	DnaJ	DnaJ	11.6	0.0	4.4e-05	0.16	40	59	39	58	25	62	0.88
gi|297660628|ref|YP_003710339.1|	121	PemK	PemK-like	85.9	0.0	1.3e-28	1.9e-24	2	106	10	113	9	117	0.84