#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Transposase_mut	PF00872.13	gi|297620248|ref|YP_003708385.1|	-	2.4e-101	339.0	0.0	2.9e-101	338.7	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.4	gi|297620248|ref|YP_003708385.1|	-	1.3e-10	41.3	0.0	4.1e-10	39.6	0.0	1.9	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.1	gi|297620248|ref|YP_003708385.1|	-	0.0074	16.2	0.6	0.11	12.5	0.1	2.7	2	1	1	3	3	3	1	DDE	domain
HicB	PF05534.7	gi|297620249|ref|YP_003708386.1|	-	0.0062	16.0	0.0	0.0099	15.4	0.0	1.4	1	0	0	1	1	1	1	HicB	family
ParD	PF09386.5	gi|297620249|ref|YP_003708386.1|	-	0.015	15.4	0.0	0.018	15.1	0.0	1.3	1	1	0	1	1	1	0	Antitoxin	ParD
CofC	PF01983.11	gi|297620249|ref|YP_003708386.1|	-	0.021	13.7	0.5	0.022	13.7	0.3	1.1	1	0	0	1	1	1	0	Guanylyl	transferase	CofC	like
DUF1778	PF08681.6	gi|297620249|ref|YP_003708386.1|	-	0.043	13.6	0.1	0.055	13.2	0.1	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1778)
ACC_central	PF08326.7	gi|297620249|ref|YP_003708386.1|	-	0.057	11.5	0.2	0.059	11.4	0.1	1.0	1	0	0	1	1	1	0	Acetyl-CoA	carboxylase,	central	region
Fic	PF02661.13	gi|297620250|ref|YP_003708387.1|	-	3.8e-07	30.7	0.0	4.9e-07	30.3	0.0	1.1	1	0	0	1	1	1	1	Fic/DOC	family
CobT_C	PF11775.3	gi|297620251|ref|YP_003708388.1|	-	0.053	12.9	0.0	0.07	12.5	0.0	1.2	1	0	0	1	1	1	0	Cobalamin	biosynthesis	protein	CobT	VWA	domain
Strabismus	PF06638.6	gi|297620252|ref|YP_003708389.1|	-	0.027	12.7	0.1	0.03	12.6	0.1	1.2	1	0	0	1	1	1	0	Strabismus	protein
DUF1282	PF06930.7	gi|297620252|ref|YP_003708389.1|	-	0.03	13.9	0.4	0.034	13.8	0.3	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1282)
7tm_7	PF08395.7	gi|297620252|ref|YP_003708389.1|	-	0.099	11.6	2.5	0.11	11.4	1.8	1.0	1	0	0	1	1	1	0	7tm	Chemosensory	receptor
O-ag_pol_Wzy	PF14296.1	gi|297620252|ref|YP_003708389.1|	-	0.11	11.1	3.5	0.11	11.0	2.4	1.0	1	0	0	1	1	1	0	O-antigen	polysaccharide	polymerase	Wzy
DUF3989	PF13150.1	gi|297620252|ref|YP_003708389.1|	-	0.11	11.9	3.6	0.063	12.7	0.8	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3989)
EpsG	PF14897.1	gi|297620252|ref|YP_003708389.1|	-	0.14	11.0	3.7	0.14	11.0	2.6	1.0	1	0	0	1	1	1	0	EpsG	family
DUF975	PF06161.6	gi|297620252|ref|YP_003708389.1|	-	0.21	11.3	3.5	0.25	11.0	2.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF975)
DUF996	PF06195.8	gi|297620252|ref|YP_003708389.1|	-	0.25	11.3	0.1	0.25	11.3	0.1	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF996)
ApoB100_C	PF12491.3	gi|297620253|ref|YP_003708390.1|	-	0.046	13.3	0.0	0.077	12.6	0.0	1.4	1	0	0	1	1	1	0	Apolipoprotein	B100	C	terminal
DUF4483	PF14825.1	gi|297620254|ref|YP_003708391.1|	-	0.03	13.9	0.1	0.039	13.6	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4483)
HTHP	PF11534.3	gi|297620254|ref|YP_003708391.1|	-	0.1	12.7	0.1	0.21	11.6	0.1	1.6	1	0	0	1	1	1	0	Hexameric	tyrosine-coordinated	heme	protein	(HTHP)
DDE_Tnp_1_assoc	PF13808.1	gi|297620255|ref|YP_003708392.1|	-	2.3e-26	91.2	0.1	8.2e-26	89.5	0.0	1.9	2	0	0	2	2	2	1	DDE_Tnp_1-associated
DDE_Tnp_1	PF01609.16	gi|297620255|ref|YP_003708392.1|	-	4.8e-15	55.6	0.1	7e-15	55.1	0.1	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
Transposase_mut	PF00872.13	gi|297620256|ref|YP_003708393.1|	-	1e-27	96.7	0.3	1.2e-27	96.4	0.2	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
DDE_Tnp_IS240	PF13610.1	gi|297620256|ref|YP_003708393.1|	-	0.02	14.8	0.0	0.028	14.3	0.0	1.4	1	1	0	1	1	1	0	DDE	domain
PLA2_B	PF01735.13	gi|297620257|ref|YP_003708394.1|	-	0.06	11.5	0.0	0.064	11.4	0.0	1.0	1	0	0	1	1	1	0	Lysophospholipase	catalytic	domain
SAP	PF02037.22	gi|297620257|ref|YP_003708394.1|	-	0.085	12.3	0.2	0.12	11.8	0.2	1.3	1	0	0	1	1	1	0	SAP	domain
polyprenyl_synt	PF00348.12	gi|297620258|ref|YP_003708395.1|	-	3.3e-38	131.0	0.0	6.8e-38	129.9	0.0	1.5	1	1	0	1	1	1	1	Polyprenyl	synthetase
Hexapep	PF00132.19	gi|297620259|ref|YP_003708396.1|	-	3.3e-14	51.6	13.8	2.2e-10	39.5	0.6	4.3	2	1	2	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|297620259|ref|YP_003708396.1|	-	0.027	14.0	10.3	0.079	12.5	0.8	3.6	4	0	0	4	4	4	0	Hexapeptide	repeat	of	succinyl-transferase
Glyco_tranf_2_3	PF13641.1	gi|297620261|ref|YP_003708398.1|	-	5.5e-21	75.4	0.0	8.1e-21	74.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|297620261|ref|YP_003708398.1|	-	5.6e-20	71.8	0.1	5.6e-20	71.8	0.0	2.8	3	1	0	3	3	3	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|297620261|ref|YP_003708398.1|	-	4.4e-11	42.3	0.0	9.3e-11	41.3	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glycos_transf_2	PF00535.21	gi|297620261|ref|YP_003708398.1|	-	5e-11	42.5	0.0	8e-11	41.9	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Carbpep_Y_N	PF05388.6	gi|297620261|ref|YP_003708398.1|	-	0.0097	16.0	0.1	0.02	15.0	0.1	1.4	1	0	0	1	1	1	1	Carboxypeptidase	Y	pro-peptide
MdoG	PF04349.7	gi|297620262|ref|YP_003708399.1|	-	1.9e-186	620.0	0.0	2.1e-186	619.9	0.0	1.0	1	0	0	1	1	1	1	Periplasmic	glucan	biosynthesis	protein,	MdoG
Dala_Dala_lig_C	PF07478.8	gi|297620263|ref|YP_003708400.1|	-	6.6e-26	90.9	0.0	9.9e-26	90.3	0.0	1.2	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
Methyltransf_31	PF13847.1	gi|297620263|ref|YP_003708400.1|	-	8e-19	67.7	0.0	1.7e-17	63.4	0.0	2.2	1	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297620263|ref|YP_003708400.1|	-	7.4e-16	58.7	0.0	2.2e-15	57.1	0.0	1.9	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297620263|ref|YP_003708400.1|	-	1.8e-15	57.1	0.0	4.2e-15	55.9	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
ATP-grasp_4	PF13535.1	gi|297620263|ref|YP_003708400.1|	-	2.9e-15	56.4	0.0	6.9e-14	51.9	0.0	2.4	1	1	0	1	1	1	1	ATP-grasp	domain
Methyltransf_25	PF13649.1	gi|297620263|ref|YP_003708400.1|	-	8.4e-13	48.5	0.0	1.9e-12	47.3	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|297620263|ref|YP_003708400.1|	-	1.1e-09	37.7	0.1	5.1e-09	35.5	0.0	1.9	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_26	PF13659.1	gi|297620263|ref|YP_003708400.1|	-	1.2e-09	38.2	0.0	2.6e-09	37.1	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297620263|ref|YP_003708400.1|	-	1.9e-08	34.1	0.9	4.2e-08	33.0	0.0	2.0	2	1	0	2	2	1	1	Methyltransferase	domain
ATPgrasp_Ter	PF15632.1	gi|297620263|ref|YP_003708400.1|	-	2.3e-07	29.8	0.0	0.0055	15.4	0.0	2.5	2	1	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
MTS	PF05175.9	gi|297620263|ref|YP_003708400.1|	-	0.00018	20.9	0.0	0.00034	20.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
TehB	PF03848.9	gi|297620263|ref|YP_003708400.1|	-	0.00037	19.7	0.0	0.00064	18.9	0.0	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
RrnaAD	PF00398.15	gi|297620263|ref|YP_003708400.1|	-	0.00099	18.2	0.0	0.023	13.7	0.0	2.1	2	0	0	2	2	2	1	Ribosomal	RNA	adenine	dimethylase
UPF0020	PF01170.13	gi|297620263|ref|YP_003708400.1|	-	0.0017	17.9	0.0	0.0084	15.6	0.0	2.1	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
ATP-grasp_3	PF02655.9	gi|297620263|ref|YP_003708400.1|	-	0.0022	17.9	0.0	0.0041	16.9	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
Methyltransf_4	PF02390.12	gi|297620263|ref|YP_003708400.1|	-	0.0048	15.9	0.0	0.041	12.9	0.0	2.3	2	0	0	2	2	2	1	Putative	methyltransferase
Cons_hypoth95	PF03602.10	gi|297620263|ref|YP_003708400.1|	-	0.023	14.1	0.0	0.043	13.2	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
CMAS	PF02353.15	gi|297620263|ref|YP_003708400.1|	-	0.023	13.7	0.0	0.041	12.9	0.0	1.3	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
RimK	PF08443.6	gi|297620263|ref|YP_003708400.1|	-	0.034	13.6	0.0	0.059	12.8	0.0	1.3	1	0	0	1	1	1	0	RimK-like	ATP-grasp	domain
Methyltransf_32	PF13679.1	gi|297620263|ref|YP_003708400.1|	-	0.059	13.0	0.0	0.11	12.1	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|297620263|ref|YP_003708400.1|	-	0.1	12.1	0.0	0.35	10.4	0.0	1.8	2	0	0	2	2	2	0	Hypothetical	methyltransferase
HTH_21	PF13276.1	gi|297620264|ref|YP_003708401.1|	-	0.02	14.8	0.2	0.022	14.7	0.2	1.3	1	1	0	1	1	1	0	HTH-like	domain
DUF952	PF06108.7	gi|297620265|ref|YP_003708402.1|	-	5.5e-13	48.5	0.0	6.2e-13	48.4	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF952)
TatC	PF00902.13	gi|297620266|ref|YP_003708403.1|	-	9.3e-51	172.2	12.7	1.1e-50	172.0	8.8	1.1	1	0	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
Claudin_3	PF06653.6	gi|297620266|ref|YP_003708403.1|	-	1.2	8.8	11.1	0.62	9.7	0.5	2.7	2	1	1	3	3	3	0	Tight	junction	protein,	Claudin-like
MttA_Hcf106	PF02416.11	gi|297620267|ref|YP_003708404.1|	-	1.4e-18	65.7	0.1	1.4e-18	65.7	0.1	1.0	1	0	0	1	1	1	1	mttA/Hcf106	family
Lyase_1	PF00206.15	gi|297620268|ref|YP_003708405.1|	-	5.7e-22	78.3	0.0	9.2e-22	77.6	0.0	1.3	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.4	gi|297620268|ref|YP_003708405.1|	-	4.9e-16	58.4	0.0	1.2e-15	57.2	0.0	1.7	1	0	0	1	1	1	1	Adenylosuccinate	lyase	C-terminus
UPF0137	PF03677.8	gi|297620269|ref|YP_003708406.1|	-	6.9e-52	176.4	3.6	8.3e-52	176.1	2.5	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0137)
CbiA	PF01656.18	gi|297620270|ref|YP_003708407.1|	-	5.2e-33	114.1	0.0	6.2e-33	113.8	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|297620270|ref|YP_003708407.1|	-	9e-09	35.4	0.1	6.5e-08	32.6	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
YhjQ	PF06564.7	gi|297620270|ref|YP_003708407.1|	-	1.4e-08	34.4	0.0	8.8e-08	31.7	0.0	1.8	1	1	0	1	1	1	1	YhjQ	protein
Fer4_NifH	PF00142.13	gi|297620270|ref|YP_003708407.1|	-	1.7e-06	27.4	0.0	0.0014	17.8	0.0	2.2	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
MipZ	PF09140.6	gi|297620270|ref|YP_003708407.1|	-	0.00023	20.3	0.2	0.028	13.5	0.1	2.2	2	0	0	2	2	2	2	ATPase	MipZ
ArsA_ATPase	PF02374.10	gi|297620270|ref|YP_003708407.1|	-	0.0031	16.5	2.6	0.35	9.8	1.0	2.8	2	2	0	2	2	2	1	Anion-transporting	ATPase
ParA	PF10609.4	gi|297620270|ref|YP_003708407.1|	-	0.014	15.2	0.1	0.05	13.4	0.0	1.9	1	1	1	2	2	2	0	ParA/MinD	ATPase	like
VirC1	PF07015.6	gi|297620270|ref|YP_003708407.1|	-	0.057	12.4	0.5	0.55	9.2	0.1	2.1	1	1	1	2	2	2	0	VirC1	protein
Herpes_UL37_2	PF07413.6	gi|297620270|ref|YP_003708407.1|	-	0.1	11.3	0.0	0.14	10.8	0.0	1.1	1	0	0	1	1	1	0	Betaherpesvirus	immediate-early	glycoprotein	UL37
tRNA-synt_2b	PF00587.20	gi|297620271|ref|YP_003708408.1|	-	1.8e-42	144.8	0.0	3.4e-42	143.9	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|297620271|ref|YP_003708408.1|	-	3.1e-20	71.9	0.5	7.8e-20	70.6	0.4	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA_SAD	PF07973.9	gi|297620271|ref|YP_003708408.1|	-	2.9e-15	55.8	0.0	6.7e-15	54.7	0.0	1.7	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
TGS	PF02824.16	gi|297620271|ref|YP_003708408.1|	-	2.1e-08	33.8	0.0	7.8e-08	32.0	0.0	1.9	2	0	0	2	2	2	1	TGS	domain
ThiS	PF02597.15	gi|297620271|ref|YP_003708408.1|	-	4.9e-06	26.8	0.0	1.4e-05	25.4	0.0	1.7	1	0	0	1	1	1	1	ThiS	family
Peptidase_M41	PF01434.13	gi|297620271|ref|YP_003708408.1|	-	0.038	13.4	0.0	0.16	11.4	0.0	1.9	2	0	0	2	2	2	0	Peptidase	family	M41
FKBP_C	PF00254.23	gi|297620274|ref|YP_003708411.1|	-	5.1e-07	29.6	0.0	1.2e-06	28.3	0.0	1.7	1	1	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
FKBP_N	PF01346.13	gi|297620274|ref|YP_003708411.1|	-	0.0031	17.5	0.0	0.055	13.5	0.0	2.3	2	0	0	2	2	2	1	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
DbpA	PF03880.10	gi|297620274|ref|YP_003708411.1|	-	0.12	12.0	0.0	0.3	10.7	0.0	1.6	1	0	0	1	1	1	0	DbpA	RNA	binding	domain
MannoseP_isomer	PF01050.13	gi|297620276|ref|YP_003708413.1|	-	5.9e-65	217.5	1.3	9.2e-65	216.8	0.9	1.3	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
NTP_transferase	PF00483.18	gi|297620276|ref|YP_003708413.1|	-	8.3e-65	218.5	0.0	2.6e-64	216.8	0.0	1.7	2	0	0	2	2	2	1	Nucleotidyl	transferase
Cupin_2	PF07883.6	gi|297620276|ref|YP_003708413.1|	-	1.3e-07	31.0	1.1	1.8e-07	30.5	0.2	1.7	2	0	0	2	2	2	1	Cupin	domain
NTP_transf_3	PF12804.2	gi|297620276|ref|YP_003708413.1|	-	2.7e-06	27.5	0.0	5e-06	26.6	0.0	1.4	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
DUF585	PF04522.7	gi|297620276|ref|YP_003708413.1|	-	0.029	13.7	0.0	0.048	13.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF585)
MFS_1	PF07690.11	gi|297620277|ref|YP_003708414.1|	-	1.6e-20	73.1	39.0	1.6e-20	73.1	27.0	2.0	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|297620277|ref|YP_003708414.1|	-	6.6e-10	37.7	15.6	9.3e-10	37.2	10.8	1.1	1	0	0	1	1	1	1	Transmembrane	secretion	effector
Acyltransferase	PF01553.16	gi|297620277|ref|YP_003708414.1|	-	1.2e-06	28.0	0.0	2.3e-06	27.1	0.0	1.5	1	0	0	1	1	1	1	Acyltransferase
DpnD-PcfM	PF14207.1	gi|297620277|ref|YP_003708414.1|	-	0.058	13.1	0.9	2.6	7.8	0.1	2.3	2	0	0	2	2	2	0	DpnD/PcfM-like	protein
CHMI	PF02962.10	gi|297620277|ref|YP_003708414.1|	-	0.11	12.6	0.0	0.35	11.0	0.0	1.8	1	1	1	2	2	2	0	5-carboxymethyl-2-hydroxymuconate	isomerase
Exonuc_V_gamma	PF04257.9	gi|297620278|ref|YP_003708415.1|	-	4.7e-157	524.3	14.8	1.8e-156	522.4	10.3	1.7	1	1	0	1	1	1	1	Exodeoxyribonuclease	V,	gamma	subunit
UvrD-helicase	PF00580.16	gi|297620279|ref|YP_003708416.1|	-	4.5e-53	180.6	0.0	1.2e-52	179.2	0.0	1.6	1	0	0	1	1	1	1	UvrD/REP	helicase	N-terminal	domain
UvrD_C	PF13361.1	gi|297620279|ref|YP_003708416.1|	-	2.8e-36	125.7	0.0	6e-34	118.0	0.0	2.5	2	1	0	2	2	2	1	UvrD-like	helicase	C-terminal	domain
UvrD_C_2	PF13538.1	gi|297620279|ref|YP_003708416.1|	-	3.3e-07	30.3	0.4	1.1e-05	25.5	0.1	2.9	2	1	0	2	2	2	1	UvrD-like	helicase	C-terminal	domain
AAA_19	PF13245.1	gi|297620279|ref|YP_003708416.1|	-	0.00025	20.7	0.0	0.0016	18.1	0.0	2.3	3	0	0	3	3	3	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|297620279|ref|YP_003708416.1|	-	0.00034	20.7	0.1	0.083	13.0	0.0	3.1	3	0	0	3	3	3	1	AAA	domain
AAA_30	PF13604.1	gi|297620279|ref|YP_003708416.1|	-	0.15	11.5	0.0	2.1	7.8	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|297620280|ref|YP_003708417.1|	-	8.5e-31	107.0	0.0	1.2e-30	106.5	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
UvrD_C_2	PF13538.1	gi|297620280|ref|YP_003708417.1|	-	1.5e-16	60.4	0.0	2.4e-16	59.7	0.0	1.3	1	0	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
AAA_11	PF13086.1	gi|297620280|ref|YP_003708417.1|	-	3e-13	49.8	0.1	1.8e-05	24.4	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
AAA_19	PF13245.1	gi|297620280|ref|YP_003708417.1|	-	5.5e-12	45.2	0.0	1.1e-11	44.2	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
Viral_helicase1	PF01443.13	gi|297620280|ref|YP_003708417.1|	-	7.1e-10	38.7	0.1	4.3e-05	23.1	0.0	3.2	3	0	0	3	3	3	2	Viral	(Superfamily	1)	RNA	helicase
Helicase_RecD	PF05127.9	gi|297620280|ref|YP_003708417.1|	-	1.9e-07	30.9	0.0	5.4e-07	29.4	0.0	1.7	1	1	0	1	1	1	1	Helicase
PhoH	PF02562.11	gi|297620280|ref|YP_003708417.1|	-	5.6e-07	28.9	0.0	0.028	13.6	0.0	2.2	2	0	0	2	2	2	2	PhoH-like	protein
AAA_22	PF13401.1	gi|297620280|ref|YP_003708417.1|	-	0.00088	19.4	0.0	0.0033	17.5	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
UvrD_C	PF13361.1	gi|297620280|ref|YP_003708417.1|	-	0.0023	17.4	0.8	0.011	15.2	0.6	1.9	1	1	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
UvrD-helicase	PF00580.16	gi|297620280|ref|YP_003708417.1|	-	0.0069	15.7	0.0	0.022	14.0	0.0	1.7	2	0	0	2	2	2	1	UvrD/REP	helicase	N-terminal	domain
DUF2075	PF09848.4	gi|297620280|ref|YP_003708417.1|	-	0.0071	15.3	0.0	0.057	12.3	0.0	2.0	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
IstB_IS21	PF01695.12	gi|297620280|ref|YP_003708417.1|	-	0.015	14.7	0.2	0.053	12.9	0.0	1.9	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
Flavi_DEAD	PF07652.9	gi|297620280|ref|YP_003708417.1|	-	0.029	14.1	0.1	0.66	9.7	0.0	2.8	2	1	0	2	2	2	0	Flavivirus	DEAD	domain
T2SE	PF00437.15	gi|297620280|ref|YP_003708417.1|	-	0.12	11.2	0.0	0.21	10.4	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_28	PF13521.1	gi|297620280|ref|YP_003708417.1|	-	0.19	11.7	0.1	0.37	10.7	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|297620280|ref|YP_003708417.1|	-	0.19	11.8	0.2	0.4	10.8	0.1	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.7	gi|297620280|ref|YP_003708417.1|	-	0.25	10.4	0.0	0.44	9.6	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
ATPgrasp_YheCD	PF14398.1	gi|297620281|ref|YP_003708418.1|	-	0.012	14.4	0.1	0.036	12.8	0.0	1.7	2	0	0	2	2	2	0	YheC/D	like	ATP-grasp
GSH-S_ATP	PF02955.11	gi|297620281|ref|YP_003708418.1|	-	0.072	12.2	0.0	0.15	11.1	0.0	1.4	1	0	0	1	1	1	0	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_ST	PF14397.1	gi|297620281|ref|YP_003708418.1|	-	0.087	11.9	0.0	0.14	11.2	0.0	1.4	1	0	0	1	1	1	0	Sugar-transfer	associated	ATP-grasp
ATPgrasp_ST	PF14397.1	gi|297620282|ref|YP_003708419.1|	-	0.009	15.1	0.0	0.015	14.4	0.0	1.3	1	0	0	1	1	1	1	Sugar-transfer	associated	ATP-grasp
ATPgrasp_YheCD	PF14398.1	gi|297620282|ref|YP_003708419.1|	-	0.011	14.5	0.5	0.023	13.5	0.0	1.7	2	0	0	2	2	2	0	YheC/D	like	ATP-grasp
DUF940	PF06082.6	gi|297620283|ref|YP_003708420.1|	-	3.7e-116	389.2	0.0	5.1e-116	388.8	0.0	1.1	1	0	0	1	1	1	1	Bacterial	putative	lipoprotein	(DUF940)
Pox_A22	PF04848.8	gi|297620283|ref|YP_003708420.1|	-	0.23	11.3	0.0	0.4	10.5	0.0	1.3	1	0	0	1	1	1	0	Poxvirus	A22	protein
ALAD	PF00490.16	gi|297620284|ref|YP_003708421.1|	-	1.8e-141	470.7	0.3	2.1e-141	470.5	0.2	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
AhpC-TSA	PF00578.16	gi|297620285|ref|YP_003708422.1|	-	1.4e-32	111.9	0.1	9.5e-32	109.2	0.0	1.9	2	0	0	2	2	2	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|297620285|ref|YP_003708422.1|	-	1.1e-15	57.4	0.0	1.5e-15	56.9	0.0	1.2	1	0	0	1	1	1	1	Redoxin
GIDA	PF01134.17	gi|297620285|ref|YP_003708422.1|	-	0.067	12.0	0.0	0.1	11.4	0.0	1.2	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
AhpC-TSA_2	PF13911.1	gi|297620285|ref|YP_003708422.1|	-	0.073	13.0	0.0	0.17	11.8	0.0	1.6	1	1	0	1	1	1	0	AhpC/TSA	antioxidant	enzyme
Lge1	PF11488.3	gi|297620287|ref|YP_003708424.1|	-	1.1	9.5	4.7	1.4	9.1	1.5	2.5	2	0	0	2	2	2	0	Transcriptional	regulatory	protein	LGE1
DUF972	PF06156.8	gi|297620287|ref|YP_003708424.1|	-	7.7	6.9	12.2	0.96	9.8	0.5	3.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
Glycos_transf_2	PF00535.21	gi|297620288|ref|YP_003708425.1|	-	2.2e-20	73.0	0.0	4.8e-20	71.9	0.0	1.6	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_4	PF13704.1	gi|297620288|ref|YP_003708425.1|	-	4.9e-07	29.9	0.0	1e-06	28.9	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|297620288|ref|YP_003708425.1|	-	0.00031	20.6	0.0	0.00044	20.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|297620288|ref|YP_003708425.1|	-	0.0099	15.1	0.0	0.04	13.1	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|297620288|ref|YP_003708425.1|	-	0.13	11.3	0.9	0.19	10.8	0.0	1.6	2	0	0	2	2	2	0	Glycosyltransferase	like	family	2
HhH-GPD	PF00730.20	gi|297620289|ref|YP_003708426.1|	-	1.1e-19	70.7	0.0	1.8e-19	69.9	0.0	1.4	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
NUDIX_4	PF14815.1	gi|297620289|ref|YP_003708426.1|	-	1.1e-18	66.6	0.0	2.8e-18	65.3	0.0	1.7	2	0	0	2	2	2	1	NUDIX	domain
HHH	PF00633.18	gi|297620289|ref|YP_003708426.1|	-	0.0065	16.1	0.0	0.014	15.1	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
NUDIX	PF00293.23	gi|297620289|ref|YP_003708426.1|	-	0.034	13.8	0.0	0.076	12.6	0.0	1.6	1	1	0	1	1	1	0	NUDIX	domain
Glyco_trans_1_2	PF13524.1	gi|297620290|ref|YP_003708427.1|	-	5.7e-17	61.7	0.0	1.3e-16	60.5	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
bZIP_Maf	PF03131.12	gi|297620291|ref|YP_003708428.1|	-	0.005	17.0	0.9	0.005	17.0	0.6	2.1	1	1	1	2	2	2	1	bZIP	Maf	transcription	factor
SRP_SPB	PF02978.14	gi|297620291|ref|YP_003708428.1|	-	0.012	15.7	0.3	0.012	15.7	0.2	1.9	1	1	0	2	2	2	0	Signal	peptide	binding	domain
DASH_Dad2	PF08654.5	gi|297620291|ref|YP_003708428.1|	-	0.26	11.2	0.0	0.26	11.2	0.0	2.3	3	0	0	3	3	3	0	DASH	complex	subunit	Dad2
GH-E	PF14410.1	gi|297620291|ref|YP_003708428.1|	-	0.73	10.0	0.1	0.73	10.0	0.1	3.3	3	2	1	4	4	4	0	HNH/ENDO	VII	superfamily	nuclease	with	conserved	GHE	residues
Atg14	PF10186.4	gi|297620291|ref|YP_003708428.1|	-	8.3	5.2	8.9	2.1	7.2	0.6	2.0	2	0	0	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DDE_Tnp_IS66_C	PF13817.1	gi|297620293|ref|YP_003708430.1|	-	5.6e-12	45.4	0.0	7.5e-12	45.0	0.0	1.1	1	0	0	1	1	1	1	IS66	C-terminal	element
INCENP_N	PF12178.3	gi|297620293|ref|YP_003708430.1|	-	0.11	12.0	0.5	0.2	11.2	0.0	1.6	2	0	0	2	2	2	0	Chromosome	passenger	complex	(CPC)	protein	INCENP	N	terminal
Transposase_mut	PF00872.13	gi|297620294|ref|YP_003708431.1|	-	2.3e-53	181.1	0.0	2.9e-53	180.8	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
Transposase_mut	PF00872.13	gi|297620295|ref|YP_003708432.1|	-	2.2e-38	131.7	1.6	2.8e-38	131.4	1.1	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
DDE_Tnp_IS240	PF13610.1	gi|297620295|ref|YP_003708432.1|	-	0.01	15.8	0.1	0.019	14.9	0.0	1.6	1	1	0	1	1	1	0	DDE	domain
TnpB_IS66	PF05717.8	gi|297620296|ref|YP_003708433.1|	-	1.5e-23	82.2	0.1	1.7e-23	82.1	0.1	1.0	1	0	0	1	1	1	1	IS66	Orf2	like	protein
Abhydrolase_6	PF12697.2	gi|297620297|ref|YP_003708434.1|	-	1.1e-10	41.7	0.0	2.6e-08	34.0	0.0	2.1	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|297620297|ref|YP_003708434.1|	-	1.8e-09	37.4	0.0	2.6e-09	36.9	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Thioesterase	PF00975.15	gi|297620297|ref|YP_003708434.1|	-	3.3e-05	24.2	0.0	4.3e-05	23.8	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	domain
FSH1	PF03959.8	gi|297620297|ref|YP_003708434.1|	-	0.00099	18.6	0.0	0.0019	17.6	0.0	1.5	1	1	0	1	1	1	1	Serine	hydrolase	(FSH1)
DUF2305	PF10230.4	gi|297620297|ref|YP_003708434.1|	-	0.01	15.3	0.0	0.11	11.8	0.0	2.2	2	0	0	2	2	2	1	Uncharacterised	conserved	protein	(DUF2305)
PGAP1	PF07819.8	gi|297620297|ref|YP_003708434.1|	-	0.016	14.7	0.0	0.042	13.4	0.0	1.5	1	1	1	2	2	2	0	PGAP1-like	protein
DUF915	PF06028.6	gi|297620297|ref|YP_003708434.1|	-	0.025	13.6	0.0	0.072	12.1	0.0	1.7	2	0	0	2	2	2	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
MFS_1	PF07690.11	gi|297620298|ref|YP_003708435.1|	-	1.1e-24	86.7	48.0	5.5e-14	51.6	15.0	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|297620298|ref|YP_003708435.1|	-	2.2e-07	29.3	3.9	2.2e-07	29.3	2.7	2.1	2	0	0	2	2	2	1	Transmembrane	secretion	effector
DUF1228	PF06779.9	gi|297620298|ref|YP_003708435.1|	-	0.00018	21.4	3.7	0.00018	21.4	2.6	2.9	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF1228)
MerC	PF03203.9	gi|297620298|ref|YP_003708435.1|	-	6.9	7.0	21.6	0.11	12.8	3.6	3.9	2	2	3	5	5	5	0	MerC	mercury	resistance	protein
Abhydrolase_2	PF02230.11	gi|297620299|ref|YP_003708436.1|	-	6.6e-19	68.2	0.0	4.8e-18	65.4	0.0	1.9	1	1	0	1	1	1	1	Phospholipase/Carboxylesterase
Abhydrolase_5	PF12695.2	gi|297620299|ref|YP_003708436.1|	-	1.4e-08	34.5	0.0	1.8e-08	34.2	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|297620299|ref|YP_003708436.1|	-	2.2e-08	34.2	0.3	2.4e-06	27.5	0.2	2.2	1	1	1	2	2	2	1	Alpha/beta	hydrolase	family
Esterase_phd	PF10503.4	gi|297620299|ref|YP_003708436.1|	-	0.027	13.7	0.0	0.044	13.0	0.0	1.3	1	1	0	1	1	1	0	Esterase	PHB	depolymerase
Abhydrolase_1	PF00561.15	gi|297620299|ref|YP_003708436.1|	-	0.035	13.6	0.2	0.097	12.2	0.1	1.5	1	1	1	2	2	2	0	alpha/beta	hydrolase	fold
Abhydrolase_3	PF07859.8	gi|297620299|ref|YP_003708436.1|	-	0.054	13.0	0.0	0.19	11.2	0.0	1.7	1	1	1	2	2	2	0	alpha/beta	hydrolase	fold
Cutinase	PF01083.17	gi|297620299|ref|YP_003708436.1|	-	0.13	11.9	0.0	0.2	11.3	0.0	1.2	1	0	0	1	1	1	0	Cutinase
HAD	PF12710.2	gi|297620301|ref|YP_003708438.1|	-	2.1e-12	47.6	0.0	2.9e-12	47.1	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|297620301|ref|YP_003708438.1|	-	9.8e-05	22.8	0.0	0.039	14.3	0.0	2.2	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
Put_Phosphatase	PF06888.7	gi|297620301|ref|YP_003708438.1|	-	0.0017	17.5	0.0	0.0028	16.8	0.0	1.4	1	0	0	1	1	1	1	Putative	Phosphatase
HAD_2	PF13419.1	gi|297620301|ref|YP_003708438.1|	-	0.014	15.5	0.0	0.051	13.7	0.0	1.9	1	1	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
Ribosomal_S27e	PF01667.12	gi|297620301|ref|YP_003708438.1|	-	0.037	13.5	0.0	0.068	12.7	0.0	1.5	1	0	0	1	1	1	0	Ribosomal	protein	S27
2-Hacid_dh_C	PF02826.14	gi|297620302|ref|YP_003708439.1|	-	1.2e-51	174.3	0.0	2.6e-51	173.3	0.0	1.6	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|297620302|ref|YP_003708439.1|	-	6.7e-26	90.3	0.0	9.1e-26	89.9	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|297620302|ref|YP_003708439.1|	-	5.2e-06	26.3	0.1	1e-05	25.4	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ACT	PF01842.20	gi|297620302|ref|YP_003708439.1|	-	0.012	15.1	0.0	0.028	13.9	0.0	1.7	1	0	0	1	1	1	0	ACT	domain
IlvN	PF07991.7	gi|297620302|ref|YP_003708439.1|	-	0.012	14.9	0.0	0.026	13.9	0.0	1.5	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
3HCDH_N	PF02737.13	gi|297620302|ref|YP_003708439.1|	-	0.043	13.4	0.7	0.45	10.1	0.4	2.2	1	1	1	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
XdhC_C	PF13478.1	gi|297620302|ref|YP_003708439.1|	-	0.056	13.7	0.0	0.099	12.9	0.0	1.4	1	0	0	1	1	1	0	XdhC	Rossmann	domain
AdoHcyase_NAD	PF00670.16	gi|297620302|ref|YP_003708439.1|	-	0.11	12.3	0.0	0.22	11.3	0.0	1.5	1	0	0	1	1	1	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
Exo_endo_phos	PF03372.18	gi|297620303|ref|YP_003708440.1|	-	0.00039	20.4	0.1	0.00068	19.6	0.0	1.3	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Wzz	PF02706.10	gi|297620305|ref|YP_003708442.1|	-	2.1e-09	37.3	0.1	2.1e-09	37.3	0.1	3.0	2	1	1	3	3	3	1	Chain	length	determinant	protein
GNVR	PF13807.1	gi|297620305|ref|YP_003708442.1|	-	0.0022	17.6	0.0	0.0071	16.0	0.0	1.9	1	0	0	1	1	1	1	G-rich	domain	on	putative	tyrosine	kinase
Myco_arth_vir_N	PF09610.5	gi|297620305|ref|YP_003708442.1|	-	5.6	7.0	6.6	0.41	10.6	0.4	2.1	2	0	0	2	2	2	0	Mycoplasma	virulence	signal	region	(Myco_arth_vir_N)
Poly_export	PF02563.11	gi|297620306|ref|YP_003708443.1|	-	4.7e-07	29.4	0.2	3.6e-06	26.6	0.1	2.5	2	0	0	2	2	2	1	Polysaccharide	biosynthesis/export	protein
SLBB	PF10531.4	gi|297620306|ref|YP_003708443.1|	-	0.00016	21.5	0.0	0.00071	19.4	0.0	2.1	2	0	0	2	2	2	1	SLBB	domain
Legionella_OMP	PF05150.7	gi|297620309|ref|YP_003708446.1|	-	0.0052	15.9	1.9	0.012	14.7	1.3	1.6	1	1	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
OMP_b-brl	PF13505.1	gi|297620309|ref|YP_003708446.1|	-	0.022	14.7	1.3	0.98	9.3	0.5	2.8	1	1	1	2	2	2	0	Outer	membrane	protein	beta-barrel	domain
Legionella_OMP	PF05150.7	gi|297620310|ref|YP_003708447.1|	-	0.025	13.7	3.4	0.039	13.0	0.9	2.3	1	1	1	2	2	2	0	Legionella	pneumophila	major	outer	membrane	protein	precursor
Glyco_tranf_2_3	PF13641.1	gi|297620311|ref|YP_003708448.1|	-	1.3e-09	38.2	0.0	1.8e-09	37.7	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|297620311|ref|YP_003708448.1|	-	7.5e-08	32.2	0.0	1.1e-07	31.6	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_trans_2_3	PF13632.1	gi|297620311|ref|YP_003708448.1|	-	1e-06	28.5	0.0	1.4e-06	28.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|297620311|ref|YP_003708448.1|	-	4.6e-05	22.7	0.0	7.2e-05	22.1	0.0	1.4	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
Epimerase	PF01370.16	gi|297620312|ref|YP_003708449.1|	-	1.3e-13	50.9	0.0	1.7e-13	50.6	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_10	PF13460.1	gi|297620312|ref|YP_003708449.1|	-	6e-05	23.1	0.0	0.013	15.4	0.0	2.2	2	0	0	2	2	2	2	NADH(P)-binding
Glyco_transf_4	PF13439.1	gi|297620312|ref|YP_003708449.1|	-	0.016	14.9	0.0	0.032	13.9	0.0	1.5	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
Ribosomal_L18_c	PF14204.1	gi|297620312|ref|YP_003708449.1|	-	0.018	15.6	0.1	0.044	14.3	0.0	1.6	1	0	0	1	1	1	0	Ribosomal	L18	C-terminal	region
dTDP_sugar_isom	PF00908.12	gi|297620313|ref|YP_003708450.1|	-	5.3e-62	208.2	0.0	5.9e-62	208.1	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
DUF434	PF04256.7	gi|297620313|ref|YP_003708450.1|	-	0.13	11.6	0.0	22	4.5	0.0	3.2	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF434)
Epimerase	PF01370.16	gi|297620314|ref|YP_003708451.1|	-	3.5e-34	118.2	0.0	4.8e-34	117.8	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.10	gi|297620314|ref|YP_003708451.1|	-	1.2e-16	60.4	0.0	1.1e-15	57.3	0.0	2.1	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
RmlD_sub_bind	PF04321.12	gi|297620314|ref|YP_003708451.1|	-	2.4e-11	43.0	0.0	4.6e-11	42.1	0.0	1.5	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.7	gi|297620314|ref|YP_003708451.1|	-	1.3e-10	40.6	0.2	2.5e-10	39.7	0.0	1.5	2	0	0	2	2	2	1	Male	sterility	protein
3Beta_HSD	PF01073.14	gi|297620314|ref|YP_003708451.1|	-	2.4e-10	39.6	0.0	3.2e-10	39.1	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
adh_short	PF00106.20	gi|297620314|ref|YP_003708451.1|	-	0.0012	18.8	0.2	0.0029	17.5	0.0	1.7	2	0	0	2	2	2	1	short	chain	dehydrogenase
NTP_transferase	PF00483.18	gi|297620315|ref|YP_003708452.1|	-	2.8e-20	72.6	0.0	7.7e-20	71.2	0.0	1.6	1	1	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|297620315|ref|YP_003708452.1|	-	1.6e-06	28.3	0.0	2.6e-06	27.6	0.0	1.3	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
Trp_Tyr_perm	PF03222.8	gi|297620316|ref|YP_003708453.1|	-	2e-96	323.2	33.2	2.3e-96	323.0	23.0	1.0	1	0	0	1	1	1	1	Tryptophan/tyrosine	permease	family
Aa_trans	PF01490.13	gi|297620316|ref|YP_003708453.1|	-	7.4e-06	24.6	26.4	1.5e-05	23.7	18.3	1.7	1	1	0	1	1	1	1	Transmembrane	amino	acid	transporter	protein
AA_permease_2	PF13520.1	gi|297620316|ref|YP_003708453.1|	-	0.00045	18.8	44.6	0.0031	16.1	30.9	2.0	1	1	0	1	1	1	1	Amino	acid	permease
MscL	PF01741.13	gi|297620316|ref|YP_003708453.1|	-	0.076	13.1	0.8	0.29	11.2	0.0	2.2	2	0	0	2	2	2	0	Large-conductance	mechanosensitive	channel,	MscL
Methyltransf_21	PF05050.7	gi|297620317|ref|YP_003708454.1|	-	1.2e-22	80.5	0.0	1.5e-22	80.2	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
V_cholerae_RfbT	PF05575.6	gi|297620317|ref|YP_003708454.1|	-	2.8e-07	29.9	0.0	3.7e-07	29.5	0.0	1.3	1	0	0	1	1	1	1	Vibrio	cholerae	RfbT	protein
Methyltransf_18	PF12847.2	gi|297620317|ref|YP_003708454.1|	-	3e-05	24.5	0.0	4.2e-05	24.1	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|297620317|ref|YP_003708454.1|	-	0.00024	20.7	0.0	0.00033	20.3	0.0	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
PNTB	PF02233.11	gi|297620318|ref|YP_003708455.1|	-	5e-169	562.9	21.3	5.7e-169	562.7	14.7	1.0	1	0	0	1	1	1	1	NAD(P)	transhydrogenase	beta	subunit
DUF1980	PF09323.5	gi|297620318|ref|YP_003708455.1|	-	1	9.0	3.3	0.8	9.4	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1980)
DUF3814	PF12769.2	gi|297620319|ref|YP_003708456.1|	-	1.5e-33	114.8	5.8	1.8e-33	114.5	4.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3814)
DUF3094	PF11293.3	gi|297620319|ref|YP_003708456.1|	-	0.37	10.3	0.2	0.37	10.3	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3094)
Bacteriocin_IId	PF09221.5	gi|297620319|ref|YP_003708456.1|	-	1.6	8.6	6.2	2.2	8.2	4.0	1.5	1	1	0	1	1	1	0	Bacteriocin	class	IId	cyclical	uberolysin-like
DUF485	PF04341.7	gi|297620319|ref|YP_003708456.1|	-	2.6	7.8	9.5	0.17	11.6	1.3	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF485
Phageshock_PspG	PF09583.5	gi|297620319|ref|YP_003708456.1|	-	6.3	6.9	11.7	7	6.7	2.9	2.2	2	0	0	2	2	2	0	Phage	shock	protein	G	(Phageshock_PspG)
AlaDh_PNT_C	PF01262.16	gi|297620320|ref|YP_003708457.1|	-	1e-44	152.0	0.5	1.5e-44	151.5	0.4	1.2	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
AlaDh_PNT_N	PF05222.10	gi|297620320|ref|YP_003708457.1|	-	5.2e-36	123.6	0.0	1.2e-35	122.4	0.0	1.6	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	N-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|297620320|ref|YP_003708457.1|	-	4.2e-06	26.0	0.3	0.0042	16.2	0.0	2.7	1	1	1	2	2	2	2	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Pyr_redox_2	PF07992.9	gi|297620320|ref|YP_003708457.1|	-	0.00019	21.4	0.5	0.00036	20.4	0.0	1.7	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|297620320|ref|YP_003708457.1|	-	0.00044	19.2	0.3	0.0028	16.5	0.1	2.1	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|297620320|ref|YP_003708457.1|	-	0.00046	20.1	0.1	0.0012	18.8	0.1	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|297620320|ref|YP_003708457.1|	-	0.0018	16.7	0.1	0.0032	15.9	0.1	1.4	1	0	0	1	1	1	1	HI0933-like	protein
Pyr_redox	PF00070.22	gi|297620320|ref|YP_003708457.1|	-	0.0026	18.1	0.2	0.0076	16.6	0.1	1.8	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
ADH_zinc_N	PF00107.21	gi|297620320|ref|YP_003708457.1|	-	0.022	14.3	0.1	0.051	13.1	0.1	1.6	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
Pyr_redox_3	PF13738.1	gi|297620320|ref|YP_003708457.1|	-	0.023	14.7	0.0	0.052	13.6	0.0	1.6	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
DUF4231	PF14015.1	gi|297620320|ref|YP_003708457.1|	-	0.03	14.3	0.2	0.05	13.5	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4231)
NmrA	PF05368.8	gi|297620320|ref|YP_003708457.1|	-	0.034	13.4	0.3	0.069	12.3	0.2	1.5	1	0	0	1	1	1	0	NmrA-like	family
3HCDH_N	PF02737.13	gi|297620320|ref|YP_003708457.1|	-	0.037	13.6	0.9	0.064	12.9	0.6	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
CoA_binding	PF02629.14	gi|297620320|ref|YP_003708457.1|	-	0.039	14.4	0.2	12	6.4	0.1	2.5	2	0	0	2	2	2	0	CoA	binding	domain
CPSase_L_chain	PF00289.17	gi|297620320|ref|YP_003708457.1|	-	0.041	13.9	0.4	0.21	11.7	0.0	2.4	3	0	0	3	3	3	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Methyltransf_18	PF12847.2	gi|297620320|ref|YP_003708457.1|	-	0.05	14.1	0.0	0.096	13.2	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
TrkA_N	PF02254.13	gi|297620320|ref|YP_003708457.1|	-	0.053	13.5	0.0	0.15	12.0	0.1	1.7	2	0	0	2	2	1	0	TrkA-N	domain
BtpA	PF03437.10	gi|297620320|ref|YP_003708457.1|	-	0.069	12.3	0.1	0.2	10.8	0.0	1.8	3	0	0	3	3	3	0	BtpA	family
AMP-binding	PF00501.23	gi|297620321|ref|YP_003708458.1|	-	1.1e-80	271.1	0.0	1.3e-80	270.8	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
Vir_act_alpha_C	PF10400.4	gi|297620321|ref|YP_003708458.1|	-	0.032	14.5	0.5	0.1	12.9	0.0	2.0	2	0	0	2	2	2	0	Virulence	activator	alpha	C-term
MreC	PF04085.9	gi|297620322|ref|YP_003708459.1|	-	4.7e-25	87.7	0.2	1.6e-24	86.0	0.1	1.8	1	1	0	1	1	1	1	rod	shape-determining	protein	MreC
SecM	PF06558.7	gi|297620322|ref|YP_003708459.1|	-	0.013	15.1	0.2	0.02	14.5	0.1	1.3	1	0	0	1	1	1	0	Secretion	monitor	precursor	protein	(SecM)
Herpes_BLRF2	PF05812.7	gi|297620322|ref|YP_003708459.1|	-	0.089	12.6	2.3	0.23	11.2	0.8	2.0	2	0	0	2	2	2	0	Herpesvirus	BLRF2	protein
DUF972	PF06156.8	gi|297620322|ref|YP_003708459.1|	-	0.22	11.8	2.2	0.38	11.1	1.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
HALZ	PF02183.13	gi|297620322|ref|YP_003708459.1|	-	1.4	8.7	5.8	0.53	10.0	2.0	1.8	2	0	0	2	2	2	0	Homeobox	associated	leucine	zipper
Aminotran_1_2	PF00155.16	gi|297620323|ref|YP_003708460.1|	-	4.5e-75	252.8	0.0	5.1e-75	252.6	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
NYN_YacP	PF05991.6	gi|297620324|ref|YP_003708461.1|	-	2.7e-22	79.2	1.9	1.9e-21	76.4	1.3	2.1	1	1	0	1	1	1	1	YacP-like	NYN	domain
DUF188	PF02639.9	gi|297620324|ref|YP_003708461.1|	-	0.06	12.7	0.0	0.17	11.3	0.0	1.8	2	1	0	2	2	2	0	Uncharacterized	BCR,	YaiI/YqxD	family	COG1671
Ham1p_like	PF01725.11	gi|297620325|ref|YP_003708462.1|	-	7.1e-67	224.4	0.1	8e-67	224.2	0.1	1.0	1	0	0	1	1	1	1	Ham1	family
AP_endonuc_2	PF01261.19	gi|297620325|ref|YP_003708462.1|	-	0.036	13.3	0.0	0.061	12.6	0.0	1.3	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
GreA_GreB_N	PF03449.10	gi|297620326|ref|YP_003708463.1|	-	2.6e-20	72.2	2.4	8.5e-20	70.5	1.7	2.0	1	0	0	1	1	1	1	Transcription	elongation	factor,	N-terminal
GreA_GreB	PF01272.14	gi|297620326|ref|YP_003708463.1|	-	2e-16	59.4	0.0	5.4e-16	58.0	0.0	1.7	1	0	0	1	1	1	1	Transcription	elongation	factor,	GreA/GreB,	C-term
DASH_Dam1	PF08653.5	gi|297620326|ref|YP_003708463.1|	-	0.069	12.9	0.1	0.27	11.0	0.1	2.0	1	0	0	1	1	1	0	DASH	complex	subunit	Dam1
DUSP	PF06337.7	gi|297620326|ref|YP_003708463.1|	-	0.66	10.4	4.7	0.92	9.9	0.1	2.9	3	1	0	3	3	3	0	DUSP	domain
5_3_exonuc	PF01367.15	gi|297620326|ref|YP_003708463.1|	-	0.96	9.7	3.9	13	6.0	0.1	3.1	3	0	0	3	3	3	0	5'-3'	exonuclease,	C-terminal	SAM	fold
SET	PF00856.23	gi|297620328|ref|YP_003708465.1|	-	5.1e-19	69.1	0.2	4e-17	62.9	0.1	2.3	1	1	0	1	1	1	1	SET	domain
Ank_2	PF12796.2	gi|297620328|ref|YP_003708465.1|	-	7.4e-05	23.0	0.0	0.00015	21.9	0.0	1.5	1	0	0	1	1	1	1	Ankyrin	repeats	(3	copies)
Ank_4	PF13637.1	gi|297620328|ref|YP_003708465.1|	-	8.9e-05	22.8	0.0	0.00018	21.8	0.0	1.5	1	0	0	1	1	1	1	Ankyrin	repeats	(many	copies)
SAF	PF08666.7	gi|297620328|ref|YP_003708465.1|	-	0.0067	16.8	0.0	0.044	14.1	0.0	2.0	2	0	0	2	2	2	1	SAF	domain
Ank_3	PF13606.1	gi|297620328|ref|YP_003708465.1|	-	0.015	15.4	0.1	0.58	10.5	0.0	2.6	2	0	0	2	2	2	0	Ankyrin	repeat
Ank	PF00023.25	gi|297620328|ref|YP_003708465.1|	-	0.04	13.7	0.2	0.19	11.5	0.0	2.1	2	0	0	2	2	2	0	Ankyrin	repeat
Ank_5	PF13857.1	gi|297620328|ref|YP_003708465.1|	-	0.043	14.0	0.1	0.091	13.0	0.0	1.6	2	0	0	2	2	2	0	Ankyrin	repeats	(many	copies)
UPF0051	PF01458.12	gi|297620329|ref|YP_003708466.1|	-	3.6e-62	209.8	0.1	4.7e-62	209.4	0.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
ABC_tran	PF00005.22	gi|297620330|ref|YP_003708467.1|	-	6.9e-22	78.2	0.0	9.1e-22	77.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297620330|ref|YP_003708467.1|	-	4.2e-07	30.2	0.2	0.00015	21.7	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|297620330|ref|YP_003708467.1|	-	9.8e-07	28.2	0.2	0.0097	15.1	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.1	gi|297620330|ref|YP_003708467.1|	-	0.00018	20.9	0.1	0.00052	19.4	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|297620330|ref|YP_003708467.1|	-	0.00041	20.7	0.4	0.0016	18.8	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|297620330|ref|YP_003708467.1|	-	0.00051	20.8	0.0	0.00081	20.1	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|297620330|ref|YP_003708467.1|	-	0.001	18.5	0.0	0.0023	17.4	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|297620330|ref|YP_003708467.1|	-	0.0036	16.5	0.0	0.0075	15.4	0.0	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_33	PF13671.1	gi|297620330|ref|YP_003708467.1|	-	0.0048	16.7	0.0	0.0067	16.3	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
MutS_V	PF00488.16	gi|297620330|ref|YP_003708467.1|	-	0.0081	15.5	0.0	2.1	7.7	0.0	2.1	2	0	0	2	2	2	2	MutS	domain	V
AAA_18	PF13238.1	gi|297620330|ref|YP_003708467.1|	-	0.011	16.0	0.2	0.04	14.2	0.2	2.1	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|297620330|ref|YP_003708467.1|	-	0.012	15.7	0.6	0.09	12.9	0.4	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_13	PF13166.1	gi|297620330|ref|YP_003708467.1|	-	0.017	13.5	0.0	0.026	13.0	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|297620330|ref|YP_003708467.1|	-	0.017	15.2	0.9	0.098	12.8	0.6	2.0	1	1	0	1	1	1	0	AAA	domain
Rad17	PF03215.10	gi|297620330|ref|YP_003708467.1|	-	0.023	13.4	0.0	0.03	12.9	0.0	1.1	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
AAA_28	PF13521.1	gi|297620330|ref|YP_003708467.1|	-	0.036	14.0	0.0	0.058	13.3	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|297620330|ref|YP_003708467.1|	-	0.1	12.5	0.0	0.25	11.2	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
LuxE	PF04443.7	gi|297620330|ref|YP_003708467.1|	-	0.13	10.8	0.0	0.17	10.5	0.0	1.1	1	0	0	1	1	1	0	Acyl-protein	synthetase,	LuxE
UPF0051	PF01458.12	gi|297620331|ref|YP_003708468.1|	-	2.7e-71	239.6	0.1	3.3e-71	239.3	0.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
Aminotran_5	PF00266.14	gi|297620332|ref|YP_003708469.1|	-	7.2e-148	492.2	0.0	8.2e-148	492.0	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|297620332|ref|YP_003708469.1|	-	1.7e-09	37.1	0.1	5.6e-09	35.4	0.0	1.8	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|297620332|ref|YP_003708469.1|	-	0.00017	20.8	0.0	0.00021	20.5	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.12	gi|297620332|ref|YP_003708469.1|	-	0.0018	17.3	0.5	0.0032	16.5	0.3	1.4	1	1	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.15	gi|297620332|ref|YP_003708469.1|	-	0.0018	16.6	0.1	0.0034	15.7	0.1	1.5	1	1	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
ART	PF01129.13	gi|297620332|ref|YP_003708469.1|	-	0.043	12.9	0.1	0.072	12.1	0.1	1.3	1	0	0	1	1	1	0	NAD:arginine	ADP-ribosyltransferase
SelA	PF03841.8	gi|297620332|ref|YP_003708469.1|	-	0.052	12.2	0.0	0.11	11.2	0.0	1.5	1	1	0	1	1	1	0	L-seryl-tRNA	selenium	transferase
Sua5_yciO_yrdC	PF01300.13	gi|297620333|ref|YP_003708470.1|	-	1.1e-51	174.6	0.0	1.4e-51	174.3	0.0	1.1	1	0	0	1	1	1	1	Telomere	recombination
SUA5	PF03481.8	gi|297620333|ref|YP_003708470.1|	-	5.6e-20	71.6	0.0	8.8e-20	71.0	0.0	1.3	1	0	0	1	1	1	1	Putative	GTP-binding	controlling	metal-binding
CPT	PF07931.7	gi|297620334|ref|YP_003708471.1|	-	2.4e-36	124.9	0.0	2.8e-36	124.7	0.0	1.0	1	0	0	1	1	1	1	Chloramphenicol	phosphotransferase-like	protein
AAA_17	PF13207.1	gi|297620334|ref|YP_003708471.1|	-	7.8e-06	26.7	0.0	2.6e-05	25.0	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|297620334|ref|YP_003708471.1|	-	0.00022	21.1	0.0	0.00044	20.1	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|297620334|ref|YP_003708471.1|	-	0.00037	20.7	0.0	0.0021	18.3	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|297620334|ref|YP_003708471.1|	-	0.0038	16.4	0.0	0.0061	15.8	0.0	1.3	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
APS_kinase	PF01583.15	gi|297620334|ref|YP_003708471.1|	-	0.0085	15.7	0.0	2.2	7.8	0.0	2.5	2	1	0	2	2	2	2	Adenylylsulphate	kinase
AAA_14	PF13173.1	gi|297620334|ref|YP_003708471.1|	-	0.038	13.8	0.0	0.076	12.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|297620334|ref|YP_003708471.1|	-	0.072	13.2	0.0	0.1	12.8	0.0	1.5	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.7	gi|297620334|ref|YP_003708471.1|	-	0.088	11.8	0.0	0.35	9.9	0.0	1.9	1	1	0	1	1	1	0	Zeta	toxin
Bac_export_1	PF01311.15	gi|297620335|ref|YP_003708472.1|	-	1.6e-48	165.1	23.0	2e-48	164.8	15.9	1.0	1	0	0	1	1	1	1	Bacterial	export	proteins,	family	1
Bac_export_3	PF01313.14	gi|297620336|ref|YP_003708473.1|	-	2.4e-27	94.4	13.4	2.7e-27	94.2	9.3	1.0	1	0	0	1	1	1	1	Bacterial	export	proteins,	family	3
NADH5_C	PF06455.6	gi|297620336|ref|YP_003708473.1|	-	0.062	12.6	4.9	0.077	12.3	3.4	1.3	1	0	0	1	1	1	0	NADH	dehydrogenase	subunit	5	C-terminus
DUF2975	PF11188.3	gi|297620336|ref|YP_003708473.1|	-	0.13	12.0	5.3	0.04	13.6	1.7	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2975)
DUF3754	PF12576.3	gi|297620336|ref|YP_003708473.1|	-	0.5	9.9	2.5	0.97	9.0	1.3	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3754)
FtsX	PF02687.16	gi|297620336|ref|YP_003708473.1|	-	3.5	7.4	11.6	4.5	7.0	8.0	1.1	1	0	0	1	1	1	0	FtsX-like	permease	family
FliP	PF00813.15	gi|297620337|ref|YP_003708474.1|	-	2.3e-67	226.4	15.9	3.4e-67	225.9	11.0	1.2	1	0	0	1	1	1	1	FliP	family
FliH	PF02108.11	gi|297620338|ref|YP_003708475.1|	-	8.4e-20	70.9	2.2	8.4e-20	70.9	1.5	1.6	1	1	0	1	1	1	1	Flagellar	assembly	protein	FliH
NolV	PF06635.7	gi|297620338|ref|YP_003708475.1|	-	0.0026	16.9	0.4	0.0036	16.4	0.3	1.1	1	0	0	1	1	1	1	Nodulation	protein	NolV
DUF2240	PF09999.4	gi|297620338|ref|YP_003708475.1|	-	0.028	13.8	2.9	0.8	9.1	0.1	2.3	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2240)
PITH	PF06201.8	gi|297620338|ref|YP_003708475.1|	-	0.036	13.8	0.3	0.048	13.4	0.2	1.3	1	0	0	1	1	1	0	PITH	domain
HrpE	PF06188.7	gi|297620338|ref|YP_003708475.1|	-	0.055	13.2	1.6	0.082	12.6	1.1	1.2	1	0	0	1	1	1	0	HrpE/YscL/FliH	and	V-type	ATPase	subunit	E
DUF3763	PF12592.3	gi|297620338|ref|YP_003708475.1|	-	0.055	13.1	0.1	0.31	10.7	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3763)
HATPase_c_3	PF13589.1	gi|297620338|ref|YP_003708475.1|	-	0.074	12.7	0.9	0.14	11.8	0.6	1.6	1	1	0	1	1	1	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PMC2NT	PF08066.7	gi|297620338|ref|YP_003708475.1|	-	0.09	13.0	1.4	0.19	12.0	0.2	2.1	2	0	0	2	2	2	0	PMC2NT	(NUC016)	domain
Med9	PF07544.8	gi|297620338|ref|YP_003708475.1|	-	0.12	12.1	4.3	0.078	12.7	0.9	2.2	2	1	0	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
DUF4041	PF13250.1	gi|297620338|ref|YP_003708475.1|	-	0.29	10.7	2.1	1.4	8.5	0.3	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4041)
DUF496	PF04363.7	gi|297620338|ref|YP_003708475.1|	-	0.29	10.9	5.0	0.19	11.5	0.5	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF496)
Syntaxin_2	PF14523.1	gi|297620338|ref|YP_003708475.1|	-	0.32	11.0	3.3	2.8	8.0	2.3	2.3	1	1	0	1	1	1	0	Syntaxin-like	protein
Syntaxin	PF00804.20	gi|297620338|ref|YP_003708475.1|	-	1.8	8.8	6.3	9	6.5	0.1	3.0	2	1	0	2	2	2	0	Syntaxin
ATP-synt_B	PF00430.13	gi|297620338|ref|YP_003708475.1|	-	7.9	6.2	15.2	0.38	10.5	5.1	2.2	1	1	1	2	2	2	0	ATP	synthase	B/B'	CF(0)
TPR_MLP1_2	PF07926.7	gi|297620338|ref|YP_003708475.1|	-	8	6.2	11.4	0.8	9.4	3.4	2.4	2	1	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
HrpB4	PF09502.5	gi|297620339|ref|YP_003708476.1|	-	0.057	12.6	0.0	0.67	9.0	0.0	2.0	2	0	0	2	2	2	0	Bacterial	type	III	secretion	protein	(HrpB4)
MgtE_N	PF03448.12	gi|297620339|ref|YP_003708476.1|	-	0.1	12.9	0.8	27	5.1	0.1	2.9	3	0	0	3	3	3	0	MgtE	intracellular	N	domain
YscJ_FliF	PF01514.12	gi|297620340|ref|YP_003708477.1|	-	6.1e-42	143.1	0.0	1.1e-41	142.3	0.0	1.3	1	0	0	1	1	1	1	Secretory	protein	of	YscJ/FliF	family
DUF1980	PF09323.5	gi|297620340|ref|YP_003708477.1|	-	0.081	12.6	0.0	0.13	12.0	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1980)
HEAT_2	PF13646.1	gi|297620342|ref|YP_003708479.1|	-	0.03	14.6	0.2	4.4	7.6	0.0	3.2	1	1	1	2	2	2	0	HEAT	repeats
DUF1186	PF06685.6	gi|297620342|ref|YP_003708479.1|	-	0.04	13.0	0.1	0.068	12.3	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1186)
HEAT_PBS	PF03130.11	gi|297620342|ref|YP_003708479.1|	-	0.066	13.7	4.3	9.9	6.9	0.1	4.0	4	0	0	4	4	4	0	PBS	lyase	HEAT-like	repeat
Radical_SAM	PF04055.16	gi|297620343|ref|YP_003708480.1|	-	3.3e-10	40.3	0.0	4.6e-10	39.9	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
Pyr_redox_2	PF07992.9	gi|297620344|ref|YP_003708481.1|	-	3.8e-45	154.2	0.0	1.1e-44	152.7	0.0	2.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|297620344|ref|YP_003708481.1|	-	4.3e-33	113.6	1.2	1e-32	112.4	0.8	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|297620344|ref|YP_003708481.1|	-	1.3e-21	76.7	8.2	2.4e-19	69.4	0.2	3.2	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|297620344|ref|YP_003708481.1|	-	3.2e-20	72.3	6.9	7.2e-14	51.4	0.0	3.8	3	1	2	5	5	5	3	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|297620344|ref|YP_003708481.1|	-	1.5e-11	43.4	5.3	4.7e-05	22.0	0.1	3.2	3	1	1	4	4	4	2	HI0933-like	protein
DAO	PF01266.19	gi|297620344|ref|YP_003708481.1|	-	6.7e-11	41.6	14.9	2.2e-05	23.5	0.1	3.9	3	1	0	4	4	4	3	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|297620344|ref|YP_003708481.1|	-	2.8e-10	40.5	0.4	6.2e-05	23.1	0.2	3.0	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|297620344|ref|YP_003708481.1|	-	2.5e-08	33.4	1.6	4.1e-08	32.7	0.6	1.7	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|297620344|ref|YP_003708481.1|	-	7.3e-08	32.3	2.2	0.0097	15.9	0.2	3.3	3	0	0	3	3	3	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|297620344|ref|YP_003708481.1|	-	6e-06	25.3	13.0	1e-05	24.6	1.2	3.8	3	1	2	5	5	5	2	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|297620344|ref|YP_003708481.1|	-	0.00017	20.6	7.2	0.046	12.6	0.0	3.1	2	1	1	3	3	3	2	Lycopene	cyclase	protein
Thi4	PF01946.12	gi|297620344|ref|YP_003708481.1|	-	0.0006	18.9	2.4	0.18	10.8	0.0	3.4	3	0	0	3	3	3	1	Thi4	family
3HCDH_N	PF02737.13	gi|297620344|ref|YP_003708481.1|	-	0.00063	19.4	4.4	0.0034	17.0	0.0	2.9	3	0	0	3	3	3	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Amino_oxidase	PF01593.19	gi|297620344|ref|YP_003708481.1|	-	0.0027	16.8	0.0	0.0063	15.6	0.0	1.6	1	0	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
NAD_binding_7	PF13241.1	gi|297620344|ref|YP_003708481.1|	-	0.032	14.4	0.6	3.3	8.0	0.1	2.5	2	0	0	2	2	2	0	Putative	NAD(P)-binding
FAD_binding_3	PF01494.14	gi|297620344|ref|YP_003708481.1|	-	0.074	12.0	5.1	2.1	7.3	0.3	3.0	2	1	1	3	3	3	0	FAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|297620344|ref|YP_003708481.1|	-	0.12	11.9	0.0	0.12	11.9	0.0	2.1	3	0	0	3	3	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_9	PF13454.1	gi|297620344|ref|YP_003708481.1|	-	0.17	11.6	0.0	0.17	11.6	0.0	2.7	3	0	0	3	3	2	0	FAD-NAD(P)-binding
Trp_halogenase	PF04820.9	gi|297620344|ref|YP_003708481.1|	-	1.6	7.2	8.5	0.63	8.5	0.3	2.8	2	1	1	3	3	3	0	Tryptophan	halogenase
Toxin_56	PF15534.1	gi|297620345|ref|YP_003708482.1|	-	3e-05	24.4	0.5	3e-05	24.4	0.4	1.7	2	1	0	2	2	2	1	Putative	toxin	56
Peptidase_A17	PF05380.8	gi|297620346|ref|YP_003708483.1|	-	0.023	14.5	0.1	0.034	14.0	0.1	1.2	1	0	0	1	1	1	0	Pao	retrotransposon	peptidase
TPR_8	PF13181.1	gi|297620346|ref|YP_003708483.1|	-	0.032	14.0	0.4	0.032	14.0	0.3	3.1	4	1	1	5	5	5	0	Tetratricopeptide	repeat
ASXH	PF13919.1	gi|297620346|ref|YP_003708483.1|	-	0.037	13.8	0.1	0.22	11.3	0.3	1.9	2	0	0	2	2	2	0	Asx	homology	domain
DWNN	PF08783.6	gi|297620346|ref|YP_003708483.1|	-	0.047	13.6	0.4	0.089	12.7	0.3	1.5	1	0	0	1	1	1	0	DWNN	domain
Cactin_mid	PF10312.4	gi|297620346|ref|YP_003708483.1|	-	0.27	10.4	4.3	0.11	11.7	0.4	1.9	2	0	0	2	2	2	0	Conserved	mid	region	of	cactin
DUF1837	PF08878.6	gi|297620346|ref|YP_003708483.1|	-	2.2	7.8	7.7	1.4	8.4	2.3	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1837)
DUF1469	PF07332.6	gi|297620348|ref|YP_003708485.1|	-	0.0024	17.5	0.2	0.0041	16.8	0.2	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1469)
DZR	PF12773.2	gi|297620348|ref|YP_003708485.1|	-	0.033	14.0	3.0	0.05	13.4	2.0	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|297620348|ref|YP_003708485.1|	-	0.042	13.0	2.7	0.068	12.4	1.9	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
DUF3021	PF11457.3	gi|297620348|ref|YP_003708485.1|	-	0.06	13.2	0.1	0.074	12.9	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3021)
SecA_DEAD	PF07517.9	gi|297620350|ref|YP_003708487.1|	-	6.5e-114	379.6	1.2	6.5e-114	379.6	0.8	1.5	2	0	0	2	2	2	1	SecA	DEAD-like	domain
SecA_SW	PF07516.8	gi|297620350|ref|YP_003708487.1|	-	1.2e-58	198.3	4.0	1.2e-58	198.3	2.8	2.6	2	1	0	2	2	2	1	SecA	Wing	and	Scaffold	domain
SecA_PP_bind	PF01043.15	gi|297620350|ref|YP_003708487.1|	-	1.4e-25	89.8	3.0	9e-25	87.2	2.0	2.5	1	1	0	1	1	1	1	SecA	preprotein	cross-linking	domain
SEC-C	PF02810.10	gi|297620350|ref|YP_003708487.1|	-	2.3e-11	42.9	11.5	4.3e-11	42.0	8.0	1.5	1	0	0	1	1	1	1	SEC-C	motif
DEAD	PF00270.24	gi|297620350|ref|YP_003708487.1|	-	0.0001	21.8	0.0	0.00038	19.9	0.0	2.0	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|297620350|ref|YP_003708487.1|	-	0.0033	17.2	0.8	0.022	14.5	0.6	2.5	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DUF1828	PF08861.5	gi|297620350|ref|YP_003708487.1|	-	0.34	10.6	2.9	1.8	8.2	0.0	3.5	3	0	0	3	3	3	0	Domain	of	unknown	function	DUF1828
BaxI_1	PF12811.2	gi|297620351|ref|YP_003708488.1|	-	2.3e-35	122.0	13.0	2.6e-35	121.8	9.0	1.0	1	0	0	1	1	1	1	Bax	inhibitor	1	like
Bax1-I	PF01027.15	gi|297620351|ref|YP_003708488.1|	-	1.6e-12	47.4	25.4	2e-12	47.1	17.6	1.0	1	0	0	1	1	1	1	Inhibitor	of	apoptosis-promoting	Bax1
PS_Dcarbxylase	PF02666.10	gi|297620352|ref|YP_003708489.1|	-	6.4e-54	182.3	0.0	8.1e-54	181.9	0.0	1.1	1	0	0	1	1	1	1	Phosphatidylserine	decarboxylase
TatD_DNase	PF01026.16	gi|297620353|ref|YP_003708490.1|	-	7.2e-73	244.9	0.4	8.2e-73	244.7	0.3	1.0	1	0	0	1	1	1	1	TatD	related	DNase
OTU	PF02338.14	gi|297620354|ref|YP_003708491.1|	-	1.2e-08	35.5	0.1	2.4e-08	34.5	0.1	1.5	1	0	0	1	1	1	1	OTU-like	cysteine	protease
Fe-ADH	PF00465.14	gi|297620356|ref|YP_003708493.1|	-	1.9e-89	299.8	0.0	2.1e-89	299.7	0.0	1.0	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|297620356|ref|YP_003708493.1|	-	2.5e-16	59.7	0.1	1.3e-08	34.4	0.0	2.1	2	0	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
Secretogranin_V	PF05281.6	gi|297620356|ref|YP_003708493.1|	-	0.041	13.2	0.0	0.064	12.6	0.0	1.3	1	0	0	1	1	1	0	Neuroendocrine	protein	7B2	precursor	(Secretogranin	V)
Y_phosphatase	PF00102.22	gi|297620358|ref|YP_003708495.1|	-	1.4e-19	70.3	0.0	3.7e-17	62.4	0.0	2.6	2	0	0	2	2	2	2	Protein-tyrosine	phosphatase
TBPIP	PF07106.8	gi|297620358|ref|YP_003708495.1|	-	0.0044	16.5	14.3	0.0044	16.5	9.9	2.2	2	0	0	2	2	2	1	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
Y_phosphatase3	PF13350.1	gi|297620358|ref|YP_003708495.1|	-	0.0068	16.6	0.0	0.32	11.2	0.0	2.7	2	0	0	2	2	2	1	Tyrosine	phosphatase	family
DUF3783	PF12646.2	gi|297620358|ref|YP_003708495.1|	-	0.017	14.8	0.1	0.7	9.6	0.2	3.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3783)
Glyco_hydro_75	PF07335.6	gi|297620358|ref|YP_003708495.1|	-	0.018	14.9	0.0	0.05	13.4	0.0	1.8	1	0	0	1	1	1	0	Fungal	chitosanase	of	glycosyl	hydrolase	group	75
DSPc	PF00782.15	gi|297620358|ref|YP_003708495.1|	-	0.086	12.4	0.0	0.086	12.4	0.0	2.7	3	0	0	3	3	3	0	Dual	specificity	phosphatase,	catalytic	domain
PTPlike_phytase	PF14566.1	gi|297620358|ref|YP_003708495.1|	-	0.19	11.7	0.0	0.19	11.7	0.0	2.8	2	1	0	2	2	2	0	Inositol	hexakisphosphate
Cob_adeno_trans	PF01923.13	gi|297620358|ref|YP_003708495.1|	-	0.42	10.3	2.4	1.2	8.8	1.7	1.8	1	0	0	1	1	1	0	Cobalamin	adenosyltransferase
AAA_11	PF13086.1	gi|297620358|ref|YP_003708495.1|	-	2.4	7.6	13.1	2.2	7.7	1.0	2.5	3	0	0	3	3	3	0	AAA	domain
DivIC	PF04977.10	gi|297620358|ref|YP_003708495.1|	-	5.6	6.5	15.9	1.7	8.1	2.6	2.8	1	1	1	2	2	2	0	Septum	formation	initiator
BCL_N	PF04714.8	gi|297620359|ref|YP_003708496.1|	-	0.06	12.9	0.3	0.13	11.9	0.2	1.5	1	1	0	1	1	1	0	BCL7,	N-terminal	conserver	region
DsbC	PF11412.3	gi|297620360|ref|YP_003708497.1|	-	2.2e-17	62.9	0.0	3.9e-17	62.1	0.0	1.4	1	0	0	1	1	1	1	Disulphide	bond	corrector	protein	DsbC
Thioredoxin_7	PF13899.1	gi|297620360|ref|YP_003708497.1|	-	1.1e-13	51.0	0.0	1.8e-13	50.2	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin-like
DsbD	PF02683.10	gi|297620360|ref|YP_003708497.1|	-	1.2e-11	44.6	21.0	2.1e-11	43.8	14.5	1.4	1	0	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
Thioredoxin_2	PF13098.1	gi|297620360|ref|YP_003708497.1|	-	1.1e-06	28.8	0.0	2.2e-06	27.8	0.0	1.5	1	0	0	1	1	1	1	Thioredoxin-like	domain
Redoxin	PF08534.5	gi|297620360|ref|YP_003708497.1|	-	0.00034	20.1	0.0	0.00062	19.3	0.0	1.3	1	0	0	1	1	1	1	Redoxin
Thioredoxin	PF00085.15	gi|297620360|ref|YP_003708497.1|	-	0.014	15.0	0.0	0.027	14.1	0.0	1.4	1	0	0	1	1	1	0	Thioredoxin
Reticulon	PF02453.12	gi|297620360|ref|YP_003708497.1|	-	1	8.9	8.2	3.8	7.0	1.7	2.8	2	0	0	2	2	2	0	Reticulon
MotA_ExbB	PF01618.11	gi|297620361|ref|YP_003708498.1|	-	8.6e-32	109.6	2.3	1e-31	109.4	0.7	1.8	2	0	0	2	2	2	1	MotA/TolQ/ExbB	proton	channel	family
ExbD	PF02472.11	gi|297620362|ref|YP_003708499.1|	-	1.3e-18	67.2	0.0	1.6e-18	66.9	0.0	1.0	1	0	0	1	1	1	1	Biopolymer	transport	protein	ExbD/TolR
Spore_III_AF	PF09581.5	gi|297620362|ref|YP_003708499.1|	-	0.078	12.8	0.1	0.1	12.4	0.0	1.2	1	0	0	1	1	1	0	Stage	III	sporulation	protein	AF	(Spore_III_AF)
TonB_C	PF03544.9	gi|297620363|ref|YP_003708500.1|	-	0.041	14.0	0.0	0.096	12.8	0.0	1.6	1	0	0	1	1	1	0	Gram-negative	bacterial	TonB	protein	C-terminal
DUF2762	PF10960.3	gi|297620363|ref|YP_003708500.1|	-	0.088	12.5	1.2	0.21	11.2	0.8	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2762)
DUF1843	PF08898.5	gi|297620363|ref|YP_003708500.1|	-	0.13	12.3	1.7	0.31	11.1	1.2	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1843)
PD40	PF07676.7	gi|297620364|ref|YP_003708501.1|	-	2.9e-24	84.2	0.4	1.1e-07	31.3	0.1	4.8	4	0	0	4	4	4	4	WD40-like	Beta	Propeller	Repeat
Pectate_lyase22	PF14583.1	gi|297620364|ref|YP_003708501.1|	-	8.5e-09	34.3	0.0	0.27	9.6	0.0	4.8	3	2	2	5	5	5	3	Oligogalacturonate	lyase
DPPIV_N	PF00930.16	gi|297620364|ref|YP_003708501.1|	-	1.6e-05	23.6	0.0	0.027	13.0	0.0	3.7	1	1	2	4	4	4	2	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
DSPc	PF00782.15	gi|297620365|ref|YP_003708502.1|	-	1.3e-18	66.8	0.0	3.3e-18	65.5	0.0	1.6	1	0	0	1	1	1	1	Dual	specificity	phosphatase,	catalytic	domain
CDKN3	PF05706.7	gi|297620365|ref|YP_003708502.1|	-	0.024	14.1	0.0	0.039	13.3	0.0	1.3	1	0	0	1	1	1	0	Cyclin-dependent	kinase	inhibitor	3	(CDKN3)
PTPlike_phytase	PF14566.1	gi|297620365|ref|YP_003708502.1|	-	0.058	13.4	0.0	0.19	11.7	0.0	1.9	1	0	0	1	1	1	0	Inositol	hexakisphosphate
Ribosomal_S9	PF00380.14	gi|297620365|ref|YP_003708502.1|	-	0.14	12.3	0.0	0.25	11.5	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S9/S16
OmpA	PF00691.15	gi|297620366|ref|YP_003708503.1|	-	4.7e-15	55.7	0.0	6.7e-15	55.2	0.0	1.2	1	0	0	1	1	1	1	OmpA	family
LysM	PF01476.15	gi|297620367|ref|YP_003708504.1|	-	2.7e-15	55.9	0.0	5.4e-15	54.9	0.0	1.5	1	0	0	1	1	1	1	LysM	domain
IncA	PF04156.9	gi|297620367|ref|YP_003708504.1|	-	0.00041	20.0	6.7	0.00041	20.0	4.6	1.8	1	1	1	2	2	2	2	IncA	protein
PspA_IM30	PF04012.7	gi|297620367|ref|YP_003708504.1|	-	0.00086	18.7	5.6	0.0012	18.2	3.7	1.4	1	1	0	1	1	1	1	PspA/IM30	family
APG6	PF04111.7	gi|297620367|ref|YP_003708504.1|	-	0.0012	18.0	5.4	0.0012	18.0	3.8	1.4	2	0	0	2	2	1	1	Autophagy	protein	Apg6
TMF_DNA_bd	PF12329.3	gi|297620367|ref|YP_003708504.1|	-	0.002	17.8	15.2	0.37	10.6	0.8	3.7	2	1	2	4	4	3	2	TATA	element	modulatory	factor	1	DNA	binding
TBPIP	PF07106.8	gi|297620367|ref|YP_003708504.1|	-	0.0044	16.5	9.7	0.12	11.8	0.2	2.5	1	1	1	2	2	2	2	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
Laminin_II	PF06009.7	gi|297620367|ref|YP_003708504.1|	-	0.0098	15.6	11.2	0.12	12.1	1.2	2.9	1	1	2	3	3	3	2	Laminin	Domain	II
Med9	PF07544.8	gi|297620367|ref|YP_003708504.1|	-	0.01	15.5	0.4	0.01	15.5	0.3	3.1	2	1	1	3	3	3	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
DUF4088	PF13317.1	gi|297620367|ref|YP_003708504.1|	-	0.015	14.6	1.8	0.45	9.8	0.0	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4088)
ERM	PF00769.14	gi|297620367|ref|YP_003708504.1|	-	0.025	14.1	7.2	0.04	13.4	5.0	1.3	1	0	0	1	1	1	0	Ezrin/radixin/moesin	family
Reo_sigmaC	PF04582.7	gi|297620367|ref|YP_003708504.1|	-	0.026	13.7	1.9	0.093	11.8	0.8	1.8	1	1	1	2	2	2	0	Reovirus	sigma	C	capsid	protein
AAA_13	PF13166.1	gi|297620367|ref|YP_003708504.1|	-	0.073	11.5	7.8	0.15	10.4	5.2	1.5	1	1	0	1	1	1	0	AAA	domain
DUF641	PF04859.7	gi|297620367|ref|YP_003708504.1|	-	0.08	12.7	0.3	0.08	12.7	0.2	2.4	2	1	0	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
Prominin	PF05478.6	gi|297620367|ref|YP_003708504.1|	-	0.094	10.2	7.2	0.081	10.4	1.6	2.1	1	1	0	2	2	2	0	Prominin
FH2	PF02181.18	gi|297620367|ref|YP_003708504.1|	-	0.096	11.5	3.9	0.35	9.6	0.1	2.2	1	1	1	2	2	2	0	Formin	Homology	2	Domain
DivIVA	PF05103.8	gi|297620367|ref|YP_003708504.1|	-	0.098	12.7	0.2	0.098	12.7	0.2	2.5	2	1	0	2	2	2	0	DivIVA	protein
DUF4446	PF14584.1	gi|297620367|ref|YP_003708504.1|	-	0.1	12.4	8.5	2.5	7.8	0.6	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF4446)
Tropomyosin_1	PF12718.2	gi|297620367|ref|YP_003708504.1|	-	0.11	12.3	12.8	0.044	13.6	5.7	2.3	1	1	1	2	2	2	0	Tropomyosin	like
DASH_Dad3	PF08656.5	gi|297620367|ref|YP_003708504.1|	-	0.12	12.0	5.6	2.9	7.6	0.2	3.5	3	1	1	4	4	4	0	DASH	complex	subunit	Dad3
DUF4618	PF15397.1	gi|297620367|ref|YP_003708504.1|	-	0.16	11.3	8.5	0.4	9.9	1.1	2.5	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4618)
WASH_WAHD	PF11945.3	gi|297620367|ref|YP_003708504.1|	-	0.17	11.1	2.5	0.13	11.5	0.3	1.6	1	1	1	2	2	2	0	WAHD	domain	of	WASH	complex
V_ATPase_I	PF01496.14	gi|297620367|ref|YP_003708504.1|	-	0.18	9.6	5.5	0.25	9.1	3.8	1.3	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF948	PF06103.6	gi|297620367|ref|YP_003708504.1|	-	0.29	11.0	6.8	0.15	11.9	0.5	2.8	1	1	2	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
TMPIT	PF07851.8	gi|297620367|ref|YP_003708504.1|	-	0.29	10.1	5.0	0.1	11.6	0.7	2.1	1	1	1	2	2	2	0	TMPIT-like	protein
Fib_alpha	PF08702.5	gi|297620367|ref|YP_003708504.1|	-	0.4	10.8	10.7	1.5	8.8	0.3	2.4	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
ZapA	PF05164.8	gi|297620367|ref|YP_003708504.1|	-	0.4	10.6	4.8	2	8.4	0.2	3.0	1	1	2	3	3	3	0	Cell	division	protein	ZapA
AATF-Che1	PF13339.1	gi|297620367|ref|YP_003708504.1|	-	0.63	10.1	4.9	0.72	10.0	0.8	2.1	2	0	0	2	2	2	0	Apoptosis	antagonizing	transcription	factor
COG2	PF06148.6	gi|297620367|ref|YP_003708504.1|	-	0.69	9.7	8.0	0.51	10.2	2.0	2.4	2	1	0	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF1664	PF07889.7	gi|297620367|ref|YP_003708504.1|	-	0.88	9.3	8.0	0.64	9.8	0.5	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
zf-C4H2	PF10146.4	gi|297620367|ref|YP_003708504.1|	-	0.98	9.3	9.7	1.4	8.9	6.7	1.2	1	0	0	1	1	1	0	Zinc	finger-containing	protein
ADIP	PF11559.3	gi|297620367|ref|YP_003708504.1|	-	1	9.2	11.4	0.5	10.2	3.9	2.6	1	1	1	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
Nup54	PF13874.1	gi|297620367|ref|YP_003708504.1|	-	1.1	8.8	12.8	0.96	9.1	3.2	2.8	1	1	1	2	2	2	0	Nucleoporin	complex	subunit	54
GAS	PF13851.1	gi|297620367|ref|YP_003708504.1|	-	1.2	8.3	13.6	7.4	5.7	9.4	2.0	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
NBP1	PF08537.5	gi|297620367|ref|YP_003708504.1|	-	1.2	8.2	6.6	1.8	7.6	4.6	1.4	1	1	0	1	1	1	0	Fungal	Nap	binding	protein	NBP1
SlyX	PF04102.7	gi|297620367|ref|YP_003708504.1|	-	1.2	9.5	14.0	4.2	7.8	3.5	3.7	2	1	1	3	3	3	0	SlyX
FlaC_arch	PF05377.6	gi|297620367|ref|YP_003708504.1|	-	1.3	8.9	10.9	8.4	6.3	0.1	4.4	3	1	2	5	5	4	0	Flagella	accessory	protein	C	(FlaC)
DUF3450	PF11932.3	gi|297620367|ref|YP_003708504.1|	-	1.8	7.7	11.0	3.1	6.9	1.1	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
Atg14	PF10186.4	gi|297620367|ref|YP_003708504.1|	-	1.9	7.3	8.1	2.8	6.7	5.6	1.4	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
MerR-DNA-bind	PF09278.6	gi|297620367|ref|YP_003708504.1|	-	1.9	8.9	7.4	0.81	10.1	0.4	3.0	3	0	0	3	3	3	0	MerR,	DNA	binding
MitMem_reg	PF13012.1	gi|297620367|ref|YP_003708504.1|	-	2.5	8.1	7.3	1.5	8.9	0.2	2.6	1	1	1	2	2	2	0	Maintenance	of	mitochondrial	structure	and	function
FliJ	PF02050.11	gi|297620367|ref|YP_003708504.1|	-	2.8	8.0	11.6	2.7	8.0	0.5	2.4	2	1	0	2	2	2	0	Flagellar	FliJ	protein
Spc7	PF08317.6	gi|297620367|ref|YP_003708504.1|	-	3.8	6.0	14.4	1.4	7.4	4.5	2.2	1	1	0	2	2	2	0	Spc7	kinetochore	protein
FlgN	PF05130.7	gi|297620367|ref|YP_003708504.1|	-	3.8	7.7	13.0	0.74	10.0	3.9	2.3	1	1	1	2	2	2	0	FlgN	protein
ATG16	PF08614.6	gi|297620367|ref|YP_003708504.1|	-	3.8	7.2	16.4	2.8	7.7	1.4	2.4	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
H-kinase_dim	PF02895.9	gi|297620367|ref|YP_003708504.1|	-	4	7.8	6.7	3.1	8.1	0.1	3.0	2	1	0	2	2	2	0	Signal	transducing	histidine	kinase,	homodimeric	domain
PspB	PF06667.7	gi|297620367|ref|YP_003708504.1|	-	4.1	7.4	5.4	2.1	8.3	0.2	2.5	2	0	0	2	2	2	0	Phage	shock	protein	B
CENP-F_leu_zip	PF10473.4	gi|297620367|ref|YP_003708504.1|	-	4.5	7.1	16.2	2	8.2	4.6	2.3	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Kinetocho_Slk19	PF12709.2	gi|297620367|ref|YP_003708504.1|	-	4.7	7.3	10.8	7.7	6.6	0.2	3.6	2	1	1	3	3	3	0	Central	kinetochore-associated
DUF1090	PF06476.7	gi|297620367|ref|YP_003708504.1|	-	6.5	6.4	9.0	2.3	7.9	2.7	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1090)
DUF848	PF05852.6	gi|297620367|ref|YP_003708504.1|	-	7.1	6.4	9.5	2.1	8.1	1.5	2.2	1	1	1	2	2	2	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
CENP-Q	PF13094.1	gi|297620367|ref|YP_003708504.1|	-	7.5	6.5	12.2	55	3.7	7.6	2.3	1	1	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Asp_Glu_race	PF01177.17	gi|297620368|ref|YP_003708505.1|	-	7.3e-37	127.3	0.9	8.8e-37	127.0	0.6	1.1	1	0	0	1	1	1	1	Asp/Glu/Hydantoin	racemase
DeoC	PF01791.4	gi|297620369|ref|YP_003708506.1|	-	6.9e-21	74.6	0.0	8.5e-21	74.3	0.0	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
SPC25	PF06703.6	gi|297620370|ref|YP_003708507.1|	-	0.058	12.9	0.1	0.55	9.7	0.0	2.0	2	0	0	2	2	2	0	Microsomal	signal	peptidase	25	kDa	subunit	(SPC25)
PetL	PF05115.9	gi|297620370|ref|YP_003708507.1|	-	5.7	6.9	7.6	10	6.1	0.3	2.3	2	0	0	2	2	2	0	Cytochrome	B6-F	complex	subunit	VI	(PetL)
S-AdoMet_synt_C	PF02773.11	gi|297620371|ref|YP_003708508.1|	-	1.2e-64	216.2	0.5	2.1e-64	215.3	0.3	1.4	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase,	C-terminal	domain
S-AdoMet_synt_M	PF02772.11	gi|297620371|ref|YP_003708508.1|	-	4.2e-46	155.7	0.0	9.2e-46	154.6	0.0	1.6	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase,	central	domain
S-AdoMet_synt_N	PF00438.15	gi|297620371|ref|YP_003708508.1|	-	1.9e-43	146.7	0.1	3.4e-43	145.9	0.0	1.4	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase,	N-terminal	domain
Response_reg	PF00072.19	gi|297620372|ref|YP_003708509.1|	-	6.7e-24	84.0	0.1	9.4e-24	83.5	0.1	1.2	1	0	0	1	1	1	1	Response	regulator	receiver	domain
Trans_reg_C	PF00486.23	gi|297620372|ref|YP_003708509.1|	-	2.9e-21	75.1	0.0	6.4e-21	74.0	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulatory	protein,	C	terminal
TPR_11	PF13414.1	gi|297620373|ref|YP_003708510.1|	-	3.8e-30	103.3	20.1	9.1e-09	34.8	0.0	10.3	10	1	0	10	10	10	6	TPR	repeat
TPR_14	PF13428.1	gi|297620373|ref|YP_003708510.1|	-	3.6e-26	89.2	27.4	0.037	14.6	0.0	17.4	13	3	8	21	21	18	7	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|297620373|ref|YP_003708510.1|	-	1.2e-24	86.3	42.4	0.028	14.7	0.0	14.3	8	5	4	13	13	13	8	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297620373|ref|YP_003708510.1|	-	1.3e-21	74.7	23.4	0.001	18.8	0.0	15.0	17	0	0	17	17	16	3	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297620373|ref|YP_003708510.1|	-	3.8e-21	75.1	20.4	0.016	15.8	0.3	12.0	10	3	2	13	13	12	6	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297620373|ref|YP_003708510.1|	-	9.3e-19	67.3	12.0	0.028	14.5	0.2	9.8	7	2	2	9	9	9	4	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_1	PF00515.23	gi|297620373|ref|YP_003708510.1|	-	1.1e-17	62.8	17.6	0.037	13.6	0.0	13.6	15	0	0	15	15	15	5	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297620373|ref|YP_003708510.1|	-	1.1e-14	54.1	30.5	0.0041	17.0	0.0	11.8	11	2	3	14	14	12	4	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297620373|ref|YP_003708510.1|	-	4.1e-13	48.1	27.3	0.088	12.6	0.0	14.0	15	1	1	16	16	15	3	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|297620373|ref|YP_003708510.1|	-	1.3e-09	37.0	3.5	0.087	12.6	0.0	10.0	10	1	1	11	11	11	1	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|297620373|ref|YP_003708510.1|	-	3e-09	36.3	19.5	0.38	11.0	0.0	11.1	13	1	0	13	13	10	3	Tetratricopeptide	repeat
ChAPs	PF09295.5	gi|297620373|ref|YP_003708510.1|	-	2.6e-08	33.0	2.7	1.2e-07	30.8	0.1	3.3	3	1	0	3	3	3	1	ChAPs	(Chs5p-Arf1p-binding	proteins)
TPR_21	PF09976.4	gi|297620373|ref|YP_003708510.1|	-	2.8e-05	24.0	13.8	0.14	12.1	0.1	7.5	8	0	0	8	8	8	1	Tetratricopeptide	repeat
PPR	PF01535.15	gi|297620373|ref|YP_003708510.1|	-	9.2e-05	22.1	1.9	0.098	12.6	0.1	6.4	8	0	0	8	8	6	1	PPR	repeat
TPR_4	PF07721.9	gi|297620373|ref|YP_003708510.1|	-	0.00011	22.2	6.5	21	5.8	0.0	7.9	9	0	0	9	9	9	0	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|297620373|ref|YP_003708510.1|	-	0.00014	21.5	13.3	0.037	13.8	0.0	7.1	7	1	2	9	9	8	1	Tetratricopeptide	repeat
PPR_3	PF13812.1	gi|297620373|ref|YP_003708510.1|	-	0.013	15.7	0.3	2.7	8.5	0.0	4.6	3	0	0	3	3	3	0	Pentatricopeptide	repeat	domain
PPR_1	PF12854.2	gi|297620373|ref|YP_003708510.1|	-	0.27	10.7	0.8	1.2	8.6	0.1	2.4	2	0	0	2	2	2	0	PPR	repeat
TPR_6	PF13174.1	gi|297620373|ref|YP_003708510.1|	-	0.62	10.6	32.7	71	4.1	0.4	13.7	17	0	0	17	17	14	0	Tetratricopeptide	repeat
EamA	PF00892.15	gi|297620374|ref|YP_003708511.1|	-	3.9e-37	127.0	39.0	2.5e-23	82.4	12.7	2.2	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|297620374|ref|YP_003708511.1|	-	1.6e-08	34.7	27.6	4.3e-06	26.8	5.9	3.0	2	1	0	2	2	2	2	Multidrug	resistance	efflux	transporter
Nuc_sug_transp	PF04142.10	gi|297620374|ref|YP_003708511.1|	-	0.073	12.1	10.5	0.043	12.9	5.6	2.0	1	1	1	2	2	2	0	Nucleotide-sugar	transporter
TPT	PF03151.11	gi|297620374|ref|YP_003708511.1|	-	0.13	11.9	28.6	0.081	12.5	9.0	2.4	2	1	0	2	2	2	0	Triose-phosphate	Transporter	family
UAA	PF08449.6	gi|297620374|ref|YP_003708511.1|	-	9.9	4.9	24.5	1	8.1	4.1	2.3	2	0	0	2	2	2	0	UAA	transporter	family
TPR_11	PF13414.1	gi|297620375|ref|YP_003708512.1|	-	1.5e-11	43.7	1.4	4.5e-05	23.0	0.0	4.0	3	1	1	4	4	4	3	TPR	repeat
TPR_17	PF13431.1	gi|297620375|ref|YP_003708512.1|	-	3.6e-11	42.3	0.0	0.00052	20.0	0.0	3.9	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|297620375|ref|YP_003708512.1|	-	1.8e-08	34.3	1.6	7.2e-05	23.0	0.0	5.0	3	2	3	6	6	6	2	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|297620375|ref|YP_003708512.1|	-	1.8e-07	31.4	0.7	0.028	14.7	0.0	4.3	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297620375|ref|YP_003708512.1|	-	8.6e-07	29.4	1.9	0.0021	18.6	0.0	3.8	3	2	1	4	4	4	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|297620375|ref|YP_003708512.1|	-	6.3e-06	26.3	0.5	0.018	15.4	0.1	3.7	4	0	0	4	4	3	1	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297620375|ref|YP_003708512.1|	-	0.00011	22.1	1.6	0.01	15.7	0.0	3.7	2	1	2	4	4	4	3	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297620375|ref|YP_003708512.1|	-	0.00015	21.4	2.7	0.26	11.2	0.2	3.9	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297620375|ref|YP_003708512.1|	-	0.0028	17.3	9.1	0.3	10.9	0.0	4.6	3	1	2	5	5	5	2	Tetratricopeptide	repeat
DUF630	PF04783.7	gi|297620375|ref|YP_003708512.1|	-	0.013	15.3	0.1	0.034	14.0	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF630)
TPR_7	PF13176.1	gi|297620375|ref|YP_003708512.1|	-	0.02	14.6	2.5	1.6	8.7	0.0	3.5	2	1	1	3	3	3	0	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|297620375|ref|YP_003708512.1|	-	0.041	13.5	5.9	0.4	10.3	0.2	3.6	5	0	0	5	5	5	0	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297620375|ref|YP_003708512.1|	-	0.046	13.8	0.6	0.3	11.2	0.0	2.6	2	1	0	2	2	2	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_9	PF13371.1	gi|297620375|ref|YP_003708512.1|	-	0.058	13.2	0.4	7.4	6.5	0.1	3.2	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_20	PF14561.1	gi|297620375|ref|YP_003708512.1|	-	0.08	13.0	0.0	3.7	7.7	0.0	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_4	PF07721.9	gi|297620375|ref|YP_003708512.1|	-	0.26	11.8	2.7	25	5.6	0.0	3.9	4	0	0	4	4	4	0	Tetratricopeptide	repeat
Lumazine_bd	PF12870.2	gi|297620376|ref|YP_003708513.1|	-	1.9e-08	34.3	1.4	0.22	11.6	0.0	5.0	5	1	0	5	5	5	3	Lumazine-binding	domain
Tol_Tol_Ttg2	PF05494.7	gi|297620376|ref|YP_003708513.1|	-	4.1e-07	29.6	0.7	1.4	8.4	0.0	4.6	4	0	0	4	4	4	3	Toluene	tolerance,	Ttg2
DUF3828	PF12883.2	gi|297620376|ref|YP_003708513.1|	-	1.4e-06	28.2	1.2	0.092	12.6	0.0	4.4	4	0	0	4	4	4	2	Protein	of	unknown	function	(DUF3828)
DUF4101	PF13355.1	gi|297620376|ref|YP_003708513.1|	-	1.7e-05	25.1	2.6	0.14	12.5	0.0	3.6	4	0	0	4	4	4	2	Protein	of	unknown	function	(DUF4101)
SnoaL_4	PF13577.1	gi|297620376|ref|YP_003708513.1|	-	0.0099	15.7	3.6	7.7	6.4	0.0	4.7	5	0	0	5	5	5	1	SnoaL-like	domain
Imm-NTF2	PF15655.1	gi|297620376|ref|YP_003708513.1|	-	1.8	9.0	6.4	5.4	7.4	0.0	3.8	5	0	0	5	5	5	0	NTF2	fold	immunity	protein
Cons_hypoth95	PF03602.10	gi|297620377|ref|YP_003708514.1|	-	6.5e-48	162.5	0.0	7.4e-48	162.3	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_26	PF13659.1	gi|297620377|ref|YP_003708514.1|	-	2.9e-10	40.1	0.0	4.1e-10	39.6	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297620377|ref|YP_003708514.1|	-	5.4e-09	36.6	0.1	7.5e-09	36.1	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|297620377|ref|YP_003708514.1|	-	5.5e-09	35.6	0.0	7.1e-09	35.2	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|297620377|ref|YP_003708514.1|	-	1.1e-08	34.7	0.0	1.5e-08	34.3	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|297620377|ref|YP_003708514.1|	-	1.7e-07	31.0	0.0	2.2e-07	30.6	0.0	1.1	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_24	PF13578.1	gi|297620377|ref|YP_003708514.1|	-	2.6e-05	24.9	0.0	4.4e-05	24.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltrans_SAM	PF10672.4	gi|297620377|ref|YP_003708514.1|	-	2.9e-05	23.0	0.0	3.9e-05	22.6	0.0	1.1	1	0	0	1	1	1	1	S-adenosylmethionine-dependent	methyltransferase
Methyltransf_15	PF09445.5	gi|297620377|ref|YP_003708514.1|	-	5.9e-05	22.6	0.0	7.8e-05	22.2	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
MethyltransfD12	PF02086.10	gi|297620377|ref|YP_003708514.1|	-	0.00025	20.6	0.5	0.11	11.9	0.0	2.1	1	1	1	2	2	2	2	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_25	PF13649.1	gi|297620377|ref|YP_003708514.1|	-	0.00034	20.9	0.0	0.00049	20.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|297620377|ref|YP_003708514.1|	-	0.0042	16.2	0.0	0.0057	15.8	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
DUF43	PF01861.11	gi|297620377|ref|YP_003708514.1|	-	0.062	12.2	0.0	0.089	11.7	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF43
N6_N4_Mtase	PF01555.13	gi|297620377|ref|YP_003708514.1|	-	0.12	11.8	0.0	12	5.3	0.0	2.2	2	0	0	2	2	2	0	DNA	methylase
MT-A70	PF05063.9	gi|297620377|ref|YP_003708514.1|	-	0.13	11.8	0.0	0.22	11.0	0.0	1.3	1	0	0	1	1	1	0	MT-A70
Methyltrans_SAM	PF10672.4	gi|297620378|ref|YP_003708515.1|	-	0.012	14.5	0.0	0.038	12.8	0.0	1.7	1	1	0	2	2	2	0	S-adenosylmethionine-dependent	methyltransferase
Transp_cyt_pur	PF02133.10	gi|297620379|ref|YP_003708516.1|	-	0.0002	20.0	27.5	0.0011	17.5	17.1	2.3	1	1	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
Peptidase_U4	PF03419.8	gi|297620379|ref|YP_003708516.1|	-	1.8	7.5	7.7	0.21	10.6	0.8	2.3	2	0	0	2	2	2	0	Sporulation	factor	SpoIIGA
DUF917	PF06032.7	gi|297620380|ref|YP_003708517.1|	-	1.6e-100	336.0	0.0	1.9e-100	335.8	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF917)
Hydantoinase_A	PF01968.13	gi|297620381|ref|YP_003708518.1|	-	2e-48	164.9	7.5	2.1e-44	151.7	3.1	3.1	2	1	0	2	2	2	2	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.8	gi|297620381|ref|YP_003708518.1|	-	1.5e-32	112.5	0.4	2.8e-29	101.8	0.0	2.4	2	0	0	2	2	2	2	Hydantoinase/oxoprolinase	N-terminal	region
MutL	PF13941.1	gi|297620381|ref|YP_003708518.1|	-	0.00077	17.8	0.3	0.17	10.1	0.0	2.4	2	0	0	2	2	2	2	MutL	protein
DDR	PF08841.5	gi|297620381|ref|YP_003708518.1|	-	0.0016	17.3	4.2	1.6	7.5	0.4	3.3	3	0	0	3	3	3	2	Diol	dehydratase	reactivase	ATPase-like	domain
FtsA	PF14450.1	gi|297620381|ref|YP_003708518.1|	-	0.0022	17.8	3.3	0.61	9.9	0.2	3.1	2	1	1	3	3	3	2	Cell	division	protein	FtsA
BcrAD_BadFG	PF01869.15	gi|297620381|ref|YP_003708518.1|	-	0.011	15.0	1.8	0.02	14.2	0.0	2.3	3	0	0	3	3	3	0	BadF/BadG/BcrA/BcrD	ATPase	family
StbA	PF06406.6	gi|297620381|ref|YP_003708518.1|	-	0.19	10.6	1.3	0.98	8.2	0.0	2.4	3	0	0	3	3	3	0	StbA	protein
Ppx-GppA	PF02541.11	gi|297620381|ref|YP_003708518.1|	-	0.29	10.2	1.9	2.1	7.4	0.2	2.6	2	1	1	3	3	3	0	Ppx/GppA	phosphatase	family
Glyco_hydro_65m	PF03632.10	gi|297620383|ref|YP_003708520.1|	-	3.6e-112	374.7	0.1	4.7e-112	374.3	0.1	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	65	central	catalytic	domain
Glyco_hydro_65N	PF03636.10	gi|297620383|ref|YP_003708520.1|	-	2.5e-59	200.6	0.0	3.4e-59	200.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	65,	N-terminal	domain
Glyco_hydro_65C	PF03633.10	gi|297620383|ref|YP_003708520.1|	-	3.7e-09	36.5	0.6	3.5e-08	33.3	0.0	2.8	3	0	0	3	3	3	1	Glycosyl	hydrolase	family	65,	C-terminal	domain
Trehalose_PPase	PF02358.11	gi|297620384|ref|YP_003708521.1|	-	1.8e-46	157.9	0.0	2.9e-46	157.2	0.0	1.3	1	0	0	1	1	1	1	Trehalose-phosphatase
HAD_2	PF13419.1	gi|297620384|ref|YP_003708521.1|	-	1.8e-18	67.3	0.2	2.6e-15	57.0	0.0	3.1	2	1	1	3	3	3	2	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|297620384|ref|YP_003708521.1|	-	1.6e-16	61.3	1.2	1.4e-14	55.0	0.0	3.2	2	2	1	3	3	3	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|297620384|ref|YP_003708521.1|	-	4.7e-10	39.0	1.0	1.1e-09	37.8	0.1	2.1	2	0	0	2	2	2	1	HAD-hyrolase-like
ADH_zinc_N	PF00107.21	gi|297620384|ref|YP_003708521.1|	-	7.3e-06	25.5	0.3	0.0038	16.7	0.0	2.7	3	0	0	3	3	3	2	Zinc-binding	dehydrogenase
HAD	PF12710.2	gi|297620384|ref|YP_003708521.1|	-	7.6e-06	26.2	0.8	0.019	15.1	0.0	3.0	2	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|297620384|ref|YP_003708521.1|	-	0.00087	18.9	0.0	0.45	10.0	0.0	3.0	1	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
DUF705	PF05152.7	gi|297620384|ref|YP_003708521.1|	-	0.1	11.5	0.1	0.47	9.3	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF705)
LAB_N	PF07578.6	gi|297620385|ref|YP_003708522.1|	-	5.4e-39	131.9	15.5	9.7e-20	70.2	3.2	2.2	2	0	0	2	2	2	2	Lipid	A	Biosynthesis	N-terminal	domain
DUF2039	PF10217.4	gi|297620386|ref|YP_003708523.1|	-	3.4	7.7	10.4	12	6.0	5.8	2.5	2	1	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2039)
MFS_1	PF07690.11	gi|297620387|ref|YP_003708524.1|	-	2.7e-22	78.9	52.4	4.9e-22	78.1	32.7	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|297620387|ref|YP_003708524.1|	-	0.74	7.8	14.7	0.013	13.6	2.5	2.2	2	0	0	2	2	2	0	Transmembrane	secretion	effector
ALMT	PF11744.3	gi|297620387|ref|YP_003708524.1|	-	7.8	5.0	7.6	11	4.5	5.2	1.2	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
DUF4179	PF13786.1	gi|297620388|ref|YP_003708525.1|	-	0.054	13.7	0.2	2.1	8.6	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4179)
DUF1002	PF06207.6	gi|297620388|ref|YP_003708525.1|	-	0.079	12.2	0.6	0.097	11.9	0.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1002)
Nol1_Nop2_Fmu	PF01189.12	gi|297620390|ref|YP_003708527.1|	-	1.7e-23	83.4	0.0	2.5e-23	82.8	0.0	1.1	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
NusB	PF01029.13	gi|297620390|ref|YP_003708527.1|	-	3.8e-20	72.2	1.5	5.9e-20	71.6	0.2	1.8	2	0	0	2	2	2	1	NusB	family
Methyltransf_31	PF13847.1	gi|297620390|ref|YP_003708527.1|	-	4.6e-05	23.0	0.0	0.00013	21.5	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297620390|ref|YP_003708527.1|	-	0.00014	22.3	0.0	0.00029	21.3	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|297620390|ref|YP_003708527.1|	-	0.00026	20.4	0.0	0.00071	18.9	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	small	domain
Methyltransf_15	PF09445.5	gi|297620390|ref|YP_003708527.1|	-	0.0047	16.5	0.0	0.021	14.3	0.0	1.9	2	0	0	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_26	PF13659.1	gi|297620390|ref|YP_003708527.1|	-	0.0092	16.0	0.0	0.018	15.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|297620390|ref|YP_003708527.1|	-	0.011	15.7	0.0	0.047	13.6	0.0	2.0	2	1	0	2	2	2	0	FtsJ-like	methyltransferase
DUF3014	PF11219.3	gi|297620390|ref|YP_003708527.1|	-	0.029	14.2	0.2	0.45	10.3	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3014)
adh_short	PF00106.20	gi|297620391|ref|YP_003708528.1|	-	2.3e-22	79.6	0.0	4.4e-22	78.7	0.0	1.5	1	1	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|297620391|ref|YP_003708528.1|	-	3.1e-08	33.6	0.0	4.7e-08	33.1	0.0	1.3	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
NAD_binding_10	PF13460.1	gi|297620391|ref|YP_003708528.1|	-	2.3e-07	31.0	0.0	4e-07	30.2	0.0	1.4	1	1	0	1	1	1	1	NADH(P)-binding
Epimerase	PF01370.16	gi|297620391|ref|YP_003708528.1|	-	1.2e-05	24.8	0.0	0.0058	16.0	0.0	2.4	1	1	1	2	2	2	2	NAD	dependent	epimerase/dehydratase	family
KR	PF08659.5	gi|297620391|ref|YP_003708528.1|	-	0.0002	21.0	0.0	0.0075	15.9	0.0	2.2	1	1	0	1	1	1	1	KR	domain
DFP	PF04127.10	gi|297620391|ref|YP_003708528.1|	-	0.0026	17.3	0.0	0.041	13.4	0.0	2.0	2	0	0	2	2	2	1	DNA	/	pantothenate	metabolism	flavoprotein
Eno-Rase_NADH_b	PF12242.3	gi|297620391|ref|YP_003708528.1|	-	0.0076	16.0	0.0	0.014	15.1	0.0	1.4	1	0	0	1	1	1	1	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
DUF1776	PF08643.5	gi|297620391|ref|YP_003708528.1|	-	0.066	12.3	0.0	0.095	11.8	0.0	1.2	1	0	0	1	1	1	0	Fungal	family	of	unknown	function	(DUF1776)
Radical_SAM	PF04055.16	gi|297620392|ref|YP_003708529.1|	-	0.094	12.8	1.0	0.5	10.5	0.7	2.1	1	1	0	1	1	1	0	Radical	SAM	superfamily
PNP_UDP_1	PF01048.15	gi|297620393|ref|YP_003708530.1|	-	1e-06	27.9	0.0	0.024	13.5	0.0	2.1	1	1	1	2	2	2	2	Phosphorylase	superfamily
DUF72	PF01904.13	gi|297620394|ref|YP_003708531.1|	-	5.2e-56	189.9	0.0	6e-56	189.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
Peptidase_M29	PF02073.10	gi|297620395|ref|YP_003708532.1|	-	4.5e-93	312.1	0.0	5.1e-93	311.9	0.0	1.0	1	0	0	1	1	1	1	Thermophilic	metalloprotease	(M29)
PrmA	PF06325.8	gi|297620396|ref|YP_003708533.1|	-	1e-43	149.5	0.0	1.2e-43	149.3	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_18	PF12847.2	gi|297620396|ref|YP_003708533.1|	-	6.8e-13	49.1	0.1	1.2e-12	48.4	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297620396|ref|YP_003708533.1|	-	2e-10	40.4	0.0	3e-10	39.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297620396|ref|YP_003708533.1|	-	1.3e-09	38.1	0.0	2.1e-09	37.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|297620396|ref|YP_003708533.1|	-	2.9e-07	30.0	0.0	4.3e-07	29.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_23	PF13489.1	gi|297620396|ref|YP_003708533.1|	-	3e-07	30.3	0.0	5.5e-07	29.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|297620396|ref|YP_003708533.1|	-	6.3e-07	29.1	0.0	8.3e-07	28.7	0.0	1.1	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_12	PF08242.7	gi|297620396|ref|YP_003708533.1|	-	5.1e-05	23.6	0.0	8.1e-05	23.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297620396|ref|YP_003708533.1|	-	7.2e-05	23.0	0.0	0.00012	22.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297620396|ref|YP_003708533.1|	-	9.4e-05	22.8	0.0	0.00016	22.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
ADH_zinc_N	PF00107.21	gi|297620396|ref|YP_003708533.1|	-	0.011	15.2	0.0	0.022	14.3	0.0	1.5	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
CMAS	PF02353.15	gi|297620396|ref|YP_003708533.1|	-	0.013	14.6	0.0	0.019	14.0	0.0	1.3	1	1	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
UPF0020	PF01170.13	gi|297620396|ref|YP_003708533.1|	-	0.038	13.5	0.0	0.057	12.9	0.0	1.2	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Methyltransf_10	PF05971.7	gi|297620396|ref|YP_003708533.1|	-	0.08	12.0	0.0	0.12	11.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF890)
Methyltransf_32	PF13679.1	gi|297620396|ref|YP_003708533.1|	-	0.08	12.6	0.0	0.11	12.1	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
TehB	PF03848.9	gi|297620396|ref|YP_003708533.1|	-	0.083	12.0	0.0	0.12	11.5	0.0	1.2	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
MetW	PF07021.7	gi|297620396|ref|YP_003708533.1|	-	0.1	11.9	0.0	0.16	11.3	0.0	1.2	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
FmrO	PF07091.6	gi|297620396|ref|YP_003708533.1|	-	0.11	11.5	0.0	0.14	11.1	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
Pro_CA	PF00484.14	gi|297620397|ref|YP_003708534.1|	-	1e-36	126.2	0.4	1.5e-36	125.7	0.0	1.4	2	0	0	2	2	2	1	Carbonic	anhydrase
DUF1313	PF07011.6	gi|297620397|ref|YP_003708534.1|	-	0.044	13.4	0.2	0.095	12.3	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1313)
Sulfate_transp	PF00916.15	gi|297620398|ref|YP_003708535.1|	-	1.5e-45	155.3	4.1	1.5e-45	155.3	2.8	2.1	2	0	0	2	2	2	1	Sulfate	transporter	family
Sulfate_tra_GLY	PF13792.1	gi|297620398|ref|YP_003708535.1|	-	1e-11	44.3	6.1	4.3e-11	42.3	4.2	2.1	1	0	0	1	1	1	1	Sulfate	transporter	N-terminal	domain	with	GLY	motif
OMP_b-brl	PF13505.1	gi|297620399|ref|YP_003708536.1|	-	2.2e-16	60.2	0.2	2.4e-16	60.1	0.2	1.0	1	0	0	1	1	1	1	Outer	membrane	protein	beta-barrel	domain
OMP_b-brl_2	PF13568.1	gi|297620399|ref|YP_003708536.1|	-	0.0017	18.2	0.9	0.0066	16.2	0.6	1.9	1	1	0	1	1	1	1	Outer	membrane	protein	beta-barrel	domain
TrmB	PF01978.14	gi|297620400|ref|YP_003708537.1|	-	0.00019	21.0	0.1	0.0004	20.0	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|297620400|ref|YP_003708537.1|	-	0.005	16.1	0.0	0.01	15.2	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
GntR	PF00392.16	gi|297620400|ref|YP_003708537.1|	-	0.031	13.7	0.1	0.12	11.8	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
SieB	PF14163.1	gi|297620400|ref|YP_003708537.1|	-	0.032	13.7	0.1	0.18	11.3	0.0	2.0	2	0	0	2	2	2	0	Superinfection	exclusion	protein	B
HTH_29	PF13551.1	gi|297620400|ref|YP_003708537.1|	-	0.05	13.7	0.4	2.3	8.3	0.0	2.5	3	0	0	3	3	3	0	Winged	helix-turn	helix
LexA_DNA_bind	PF01726.11	gi|297620400|ref|YP_003708537.1|	-	0.082	12.4	0.0	0.17	11.4	0.0	1.5	1	0	0	1	1	1	0	LexA	DNA	binding	domain
BioY	PF02632.9	gi|297620401|ref|YP_003708538.1|	-	8.3e-17	61.2	15.7	8.3e-17	61.2	10.9	2.2	2	1	0	2	2	2	1	BioY	family
BPL_N	PF09825.4	gi|297620402|ref|YP_003708539.1|	-	1.6e-12	46.8	0.0	2.1e-12	46.5	0.0	1.1	1	0	0	1	1	1	1	Biotin-protein	ligase,	N	terminal
MgsA_C	PF12002.3	gi|297620403|ref|YP_003708540.1|	-	5.4e-69	231.1	0.0	7.5e-69	230.7	0.0	1.2	1	0	0	1	1	1	1	MgsA	AAA+	ATPase	C	terminal
RuvB_N	PF05496.7	gi|297620403|ref|YP_003708540.1|	-	1.5e-15	56.9	0.0	3.6e-14	52.3	0.0	2.1	1	1	1	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA	PF00004.24	gi|297620403|ref|YP_003708540.1|	-	7.7e-14	52.0	0.0	1.4e-13	51.2	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|297620403|ref|YP_003708540.1|	-	4.7e-07	29.6	0.0	8.9e-06	25.4	0.0	2.2	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Sigma54_activat	PF00158.21	gi|297620403|ref|YP_003708540.1|	-	1.3e-05	24.7	0.0	0.0054	16.2	0.0	2.3	1	1	1	2	2	2	1	Sigma-54	interaction	domain
AAA_16	PF13191.1	gi|297620403|ref|YP_003708540.1|	-	1.6e-05	24.9	0.0	0.0013	18.7	0.0	2.6	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|297620403|ref|YP_003708540.1|	-	2.4e-05	24.4	0.0	0.014	15.5	0.0	2.5	1	1	1	2	2	2	1	AAA	domain
DNA_pol3_delta2	PF13177.1	gi|297620403|ref|YP_003708540.1|	-	7.9e-05	22.3	0.0	0.0031	17.1	0.0	2.3	1	1	1	2	2	2	1	DNA	polymerase	III,	delta	subunit
Mg_chelatase	PF01078.16	gi|297620403|ref|YP_003708540.1|	-	0.00014	21.1	0.1	0.32	10.1	0.0	2.3	1	1	1	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
DUF815	PF05673.8	gi|297620403|ref|YP_003708540.1|	-	0.0002	20.3	0.0	0.0012	17.7	0.0	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
AAA_17	PF13207.1	gi|297620403|ref|YP_003708540.1|	-	0.00024	21.9	0.0	0.00075	20.3	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|297620403|ref|YP_003708540.1|	-	0.00031	20.6	0.0	0.00057	19.7	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_3	PF07726.6	gi|297620403|ref|YP_003708540.1|	-	0.00031	20.3	0.0	0.0021	17.6	0.0	2.0	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activ_2	PF14532.1	gi|297620403|ref|YP_003708540.1|	-	0.00056	19.9	0.0	0.0012	18.9	0.0	1.6	1	0	0	1	1	1	1	Sigma-54	interaction	domain
Zeta_toxin	PF06414.7	gi|297620403|ref|YP_003708540.1|	-	0.00077	18.6	0.0	0.0014	17.7	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
SKI	PF01202.17	gi|297620403|ref|YP_003708540.1|	-	0.013	15.3	0.0	0.035	13.9	0.0	1.7	1	0	0	1	1	1	0	Shikimate	kinase
ResIII	PF04851.10	gi|297620403|ref|YP_003708540.1|	-	0.013	15.3	0.0	1.5	8.6	0.0	2.6	2	1	1	3	3	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_2	PF07724.9	gi|297620403|ref|YP_003708540.1|	-	0.019	14.8	0.0	0.053	13.4	0.0	1.7	2	0	0	2	2	1	0	AAA	domain	(Cdc48	subfamily)
DNA_pol3_delta	PF06144.8	gi|297620403|ref|YP_003708540.1|	-	0.02	14.4	0.2	0.06	12.8	0.1	1.8	1	1	1	2	2	2	0	DNA	polymerase	III,	delta	subunit
AAA_19	PF13245.1	gi|297620403|ref|YP_003708540.1|	-	0.033	13.9	0.0	0.08	12.7	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_24	PF13479.1	gi|297620403|ref|YP_003708540.1|	-	0.055	13.0	0.0	0.094	12.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
TIP49	PF06068.8	gi|297620403|ref|YP_003708540.1|	-	0.07	11.8	0.0	7.3	5.1	0.0	2.2	1	1	1	2	2	2	0	TIP49	C-terminus
RNA_helicase	PF00910.17	gi|297620403|ref|YP_003708540.1|	-	0.091	12.9	0.0	0.17	12.0	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
AAA_18	PF13238.1	gi|297620403|ref|YP_003708540.1|	-	0.11	12.7	0.0	0.24	11.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|297620403|ref|YP_003708540.1|	-	0.12	12.2	0.0	0.34	10.7	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
Viral_helicase1	PF01443.13	gi|297620403|ref|YP_003708540.1|	-	0.14	11.6	0.0	0.2	11.1	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
FA_desaturase	PF00487.19	gi|297620405|ref|YP_003708542.1|	-	1.7e-38	132.5	17.8	1.7e-38	132.5	12.3	1.5	1	1	1	2	2	2	1	Fatty	acid	desaturase
UPF0004	PF00919.15	gi|297620406|ref|YP_003708543.1|	-	8e-25	86.5	0.0	1.7e-24	85.5	0.0	1.6	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
Radical_SAM	PF04055.16	gi|297620406|ref|YP_003708543.1|	-	9e-22	78.0	0.3	1.6e-20	73.9	0.0	2.7	3	0	0	3	3	3	1	Radical	SAM	superfamily
GcpE	PF04551.9	gi|297620406|ref|YP_003708543.1|	-	0.043	12.6	0.0	0.064	12.0	0.0	1.2	1	0	0	1	1	1	0	GcpE	protein
GtrA	PF04138.9	gi|297620407|ref|YP_003708544.1|	-	2.4e-18	66.2	16.0	8.9e-18	64.3	11.4	1.6	1	1	0	1	1	1	1	GtrA-like	protein
Methyltransf_23	PF13489.1	gi|297620408|ref|YP_003708545.1|	-	2.8e-08	33.6	0.0	3.4e-08	33.3	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297620408|ref|YP_003708545.1|	-	0.0002	21.6	0.0	0.063	13.6	0.0	2.3	1	1	1	2	2	2	2	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297620408|ref|YP_003708545.1|	-	0.00062	20.1	0.1	0.0043	17.5	0.1	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297620408|ref|YP_003708545.1|	-	0.0023	18.3	0.0	0.011	16.1	0.0	1.9	1	1	1	2	2	2	1	Methyltransferase	domain
Coa1	PF08695.5	gi|297620409|ref|YP_003708546.1|	-	0.14	11.6	0.0	0.44	10.0	0.0	1.8	2	0	0	2	2	2	0	Cytochrome	oxidase	complex	assembly	protein	1
SSF	PF00474.12	gi|297620410|ref|YP_003708547.1|	-	4.3e-76	256.1	27.4	5e-76	255.9	19.0	1.0	1	0	0	1	1	1	1	Sodium:solute	symporter	family
Hexapep	PF00132.19	gi|297620411|ref|YP_003708548.1|	-	6.8e-20	69.6	12.6	8.1e-07	28.2	0.2	4.1	2	1	1	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|297620411|ref|YP_003708548.1|	-	4.5e-07	29.3	14.5	0.047	13.2	0.4	4.8	4	2	1	5	5	5	3	Hexapeptide	repeat	of	succinyl-transferase
TPR_19	PF14559.1	gi|297620412|ref|YP_003708549.1|	-	2.6e-10	40.4	23.7	0.034	14.4	1.0	7.1	6	1	1	7	7	7	4	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297620412|ref|YP_003708549.1|	-	3.7e-06	27.4	13.1	0.14	12.8	0.0	6.5	6	1	0	6	6	6	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|297620412|ref|YP_003708549.1|	-	6.5e-05	23.2	14.5	0.12	13.0	0.1	6.5	4	1	2	6	6	6	2	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|297620412|ref|YP_003708549.1|	-	0.00023	20.7	11.4	0.0014	18.2	0.1	5.3	4	1	0	5	5	5	1	TPR	repeat
TPR_20	PF14561.1	gi|297620412|ref|YP_003708549.1|	-	0.00055	19.9	8.0	0.18	11.9	0.2	4.5	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297620412|ref|YP_003708549.1|	-	0.0077	16.0	15.2	0.51	10.3	0.2	5.9	6	0	0	6	6	6	2	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|297620412|ref|YP_003708549.1|	-	0.08	13.1	7.1	9.7	6.6	0.0	5.5	4	1	1	5	5	5	0	Tetratricopeptide	repeat
Macro	PF01661.16	gi|297620413|ref|YP_003708550.1|	-	5e-31	107.0	0.1	8.4e-31	106.3	0.1	1.4	1	0	0	1	1	1	1	Macro	domain
GTP_EFTU	PF00009.22	gi|297620414|ref|YP_003708551.1|	-	4.9e-52	176.0	0.0	1.1e-51	174.9	0.0	1.6	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
EFG_C	PF00679.19	gi|297620414|ref|YP_003708551.1|	-	6.8e-20	70.7	0.1	2.5e-19	68.9	0.0	2.0	2	0	0	2	2	2	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.20	gi|297620414|ref|YP_003708551.1|	-	3.6e-12	46.2	2.6	4.2e-12	46.0	0.8	2.0	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|297620414|ref|YP_003708551.1|	-	0.00084	19.2	0.0	0.0031	17.4	0.0	1.9	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
EFG_II	PF14492.1	gi|297620414|ref|YP_003708551.1|	-	0.0046	16.7	0.0	0.0088	15.8	0.0	1.4	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
Septin	PF00735.13	gi|297620414|ref|YP_003708551.1|	-	0.0078	15.2	0.0	0.013	14.4	0.0	1.3	1	0	0	1	1	1	1	Septin
FeoB_N	PF02421.13	gi|297620414|ref|YP_003708551.1|	-	0.033	13.4	0.0	0.3	10.3	0.0	2.4	2	1	0	2	2	2	0	Ferrous	iron	transport	protein	B
Miro	PF08477.8	gi|297620414|ref|YP_003708551.1|	-	0.072	13.5	0.0	0.15	12.5	0.0	1.5	1	0	0	1	1	1	0	Miro-like	protein
Beta-Casp	PF10996.3	gi|297620415|ref|YP_003708552.1|	-	1.9e-27	95.7	0.0	3.2e-27	94.9	0.0	1.4	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|297620415|ref|YP_003708552.1|	-	3.2e-16	59.5	0.1	8.1e-16	58.2	0.0	1.7	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|297620415|ref|YP_003708552.1|	-	2.8e-15	55.8	0.0	8.6e-15	54.2	0.0	1.9	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_2	PF12706.2	gi|297620415|ref|YP_003708552.1|	-	3.7e-11	42.9	0.0	6.1e-11	42.2	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Tex_N	PF09371.5	gi|297620416|ref|YP_003708553.1|	-	2.5e-73	245.5	4.5	2.5e-73	245.5	3.1	1.7	2	0	0	2	2	2	1	Tex-like	protein	N-terminal	domain
HHH_3	PF12836.2	gi|297620416|ref|YP_003708553.1|	-	8e-25	86.5	0.0	2.2e-24	85.1	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
S1	PF00575.18	gi|297620416|ref|YP_003708553.1|	-	3e-21	75.2	0.8	6.7e-21	74.1	0.6	1.7	1	0	0	1	1	1	1	S1	RNA	binding	domain
YqgF	PF14639.1	gi|297620416|ref|YP_003708553.1|	-	5.5e-10	38.9	0.0	1.5e-09	37.6	0.0	1.8	1	0	0	1	1	1	1	Holliday-junction	resolvase-like	of	SPT6
HHH_7	PF14635.1	gi|297620416|ref|YP_003708553.1|	-	1.4e-07	31.6	0.0	3.8e-07	30.1	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
DLD	PF14878.1	gi|297620416|ref|YP_003708553.1|	-	0.0012	18.9	0.0	0.052	13.6	0.0	2.9	1	1	1	2	2	2	1	Death-like	domain	of	SPT6
HTH_41	PF14502.1	gi|297620416|ref|YP_003708553.1|	-	0.014	14.9	0.0	0.072	12.7	0.0	2.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
T2SK	PF03934.8	gi|297620416|ref|YP_003708553.1|	-	0.015	14.4	0.2	0.04	13.0	0.0	1.7	2	0	0	2	2	2	0	Type	II	secretion	system	(T2SS),	protein	K
DUF460	PF04312.8	gi|297620416|ref|YP_003708553.1|	-	0.046	13.2	0.0	0.49	9.9	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF460)
HTH_24	PF13412.1	gi|297620416|ref|YP_003708553.1|	-	0.72	9.2	4.2	2.2	7.7	0.1	3.4	4	0	0	4	4	4	0	Winged	helix-turn-helix	DNA-binding
Sigma54_DBD	PF04552.8	gi|297620417|ref|YP_003708554.1|	-	1e-53	181.0	0.4	5.6e-53	178.7	0.1	2.2	2	0	0	2	2	2	1	Sigma-54,	DNA	binding	domain
Sigma54_CBD	PF04963.8	gi|297620417|ref|YP_003708554.1|	-	1.2e-38	132.5	0.6	1.2e-38	132.5	0.4	2.5	3	0	0	3	3	3	1	Sigma-54	factor,	core	binding	domain
Sigma54_AID	PF00309.15	gi|297620417|ref|YP_003708554.1|	-	5.9e-08	32.0	14.1	1.5e-07	30.7	9.8	1.7	1	0	0	1	1	1	1	Sigma-54	factor,	Activator	interacting	domain	(AID)
HTH_36	PF13730.1	gi|297620417|ref|YP_003708554.1|	-	0.00014	21.9	0.0	2.8	8.1	0.0	4.1	3	1	1	4	4	4	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297620417|ref|YP_003708554.1|	-	0.00021	20.8	0.1	0.0097	15.5	0.0	3.1	3	0	0	3	3	3	1	Homeodomain-like	domain
HTH_29	PF13551.1	gi|297620417|ref|YP_003708554.1|	-	0.00051	20.1	0.1	0.0077	16.3	0.0	2.8	3	0	0	3	3	3	1	Winged	helix-turn	helix
HTH_17	PF12728.2	gi|297620417|ref|YP_003708554.1|	-	0.00078	19.6	0.0	0.0094	16.1	0.0	2.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_AraC	PF00165.18	gi|297620417|ref|YP_003708554.1|	-	0.006	16.3	0.0	0.19	11.5	0.0	2.7	2	0	0	2	2	2	1	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
HTH_Tnp_ISL3	PF13542.1	gi|297620417|ref|YP_003708554.1|	-	0.0096	15.0	0.0	0.029	13.5	0.0	1.8	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_38	PF13936.1	gi|297620417|ref|YP_003708554.1|	-	0.01	15.3	0.0	0.037	13.5	0.0	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
MerR	PF00376.18	gi|297620417|ref|YP_003708554.1|	-	0.048	13.2	0.3	8.8	5.9	0.0	3.4	3	0	0	3	3	3	0	MerR	family	regulatory	protein
GEMIN8	PF15348.1	gi|297620417|ref|YP_003708554.1|	-	0.056	13.4	5.7	0.096	12.7	4.0	1.3	1	0	0	1	1	1	0	Gemini	of	Cajal	bodies-associated	protein	8
HTH_30	PF13556.1	gi|297620417|ref|YP_003708554.1|	-	0.064	12.8	0.1	5.5	6.6	0.0	2.9	3	0	0	3	3	3	0	PucR	C-terminal	helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|297620417|ref|YP_003708554.1|	-	0.065	12.6	0.1	0.52	9.8	0.0	2.5	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_Crp_2	PF13545.1	gi|297620417|ref|YP_003708554.1|	-	0.07	12.9	0.0	0.58	9.9	0.0	2.6	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
MarR_2	PF12802.2	gi|297620417|ref|YP_003708554.1|	-	0.094	12.3	0.0	0.66	9.6	0.0	2.4	2	0	0	2	2	2	0	MarR	family
GntR	PF00392.16	gi|297620417|ref|YP_003708554.1|	-	0.17	11.3	3.5	8.5	5.9	0.0	4.3	5	0	0	5	5	5	0	Bacterial	regulatory	proteins,	gntR	family
TFIID_20kDa	PF03847.8	gi|297620417|ref|YP_003708554.1|	-	0.18	12.0	0.0	0.18	12.0	0.0	3.1	4	0	0	4	4	3	0	Transcription	initiation	factor	TFIID	subunit	A
HTH_3	PF01381.17	gi|297620417|ref|YP_003708554.1|	-	0.45	10.3	3.2	0.57	10.0	0.0	2.8	3	0	0	3	3	3	0	Helix-turn-helix
RHS_repeat	PF05593.9	gi|297620418|ref|YP_003708555.1|	-	3.5e-41	138.5	68.4	4.3e-05	23.5	0.1	23.5	17	5	6	23	23	23	14	RHS	Repeat
MORN_2	PF07661.8	gi|297620418|ref|YP_003708555.1|	-	0.16	12.1	7.0	22	5.5	0.5	6.3	3	1	1	4	4	4	0	MORN	repeat	variant
CytB6-F_Fe-S	PF08802.5	gi|297620420|ref|YP_003708557.1|	-	0.055	13.4	0.4	0.18	11.8	0.2	1.9	1	0	0	1	1	1	0	Cytochrome	B6-F	complex	Fe-S	subunit
RHS_repeat	PF05593.9	gi|297620422|ref|YP_003708559.1|	-	5.1e-08	32.8	1.7	9.5e-05	22.4	0.1	2.4	2	1	0	2	2	2	2	RHS	Repeat
DUF2963	PF11178.3	gi|297620422|ref|YP_003708559.1|	-	0.016	14.6	4.1	0.02	14.2	0.5	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2963)
HTH_Tnp_1	PF01527.15	gi|297620426|ref|YP_003708563.1|	-	3.5e-11	42.8	0.4	4.5e-11	42.5	0.3	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.1	gi|297620426|ref|YP_003708563.1|	-	1.1e-05	25.3	0.0	1.6e-05	24.7	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297620426|ref|YP_003708563.1|	-	0.00018	21.0	0.0	0.00027	20.4	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
RepB-RCR_reg	PF10723.4	gi|297620426|ref|YP_003708563.1|	-	0.012	15.3	0.1	0.14	11.9	0.0	2.0	2	0	0	2	2	2	0	Replication	regulatory	protein	RepB
HTH_29	PF13551.1	gi|297620426|ref|YP_003708563.1|	-	0.032	14.3	0.0	0.037	14.1	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
MTBP_C	PF14920.1	gi|297620426|ref|YP_003708563.1|	-	0.095	12.1	0.1	0.1	12.0	0.0	1.1	1	0	0	1	1	1	0	MDM2-binding
DivIC	PF04977.10	gi|297620426|ref|YP_003708563.1|	-	0.27	10.7	1.9	0.36	10.3	1.3	1.2	1	0	0	1	1	1	0	Septum	formation	initiator
rve	PF00665.21	gi|297620427|ref|YP_003708564.1|	-	3e-21	75.7	0.0	4.6e-21	75.1	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.1	gi|297620427|ref|YP_003708564.1|	-	4.8e-15	55.3	1.3	9.7e-15	54.3	0.9	1.5	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.1	gi|297620427|ref|YP_003708564.1|	-	1.7e-13	49.8	0.3	3.7e-13	48.7	0.2	1.6	1	0	0	1	1	1	1	Integrase	core	domain
rve_2	PF13333.1	gi|297620427|ref|YP_003708564.1|	-	0.00012	22.0	2.9	0.00024	21.0	2.0	1.6	1	0	0	1	1	1	1	Integrase	core	domain
HpaB_N	PF11794.3	gi|297620427|ref|YP_003708564.1|	-	0.035	13.5	0.4	5	6.4	0.0	2.2	2	0	0	2	2	2	0	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HTH_32	PF13565.1	gi|297620427|ref|YP_003708564.1|	-	0.064	14.0	0.3	0.064	14.0	0.2	2.8	3	1	0	3	3	3	0	Homeodomain-like	domain
Trypsin_2	PF13365.1	gi|297620428|ref|YP_003708565.1|	-	7.9e-21	74.2	0.1	1.2e-20	73.6	0.1	1.3	1	0	0	1	1	1	1	Trypsin-like	peptidase	domain
Trypsin	PF00089.21	gi|297620428|ref|YP_003708565.1|	-	5.7e-13	48.9	0.4	1.4e-12	47.6	0.3	1.6	1	1	0	1	1	1	1	Trypsin
Peptidase_S7	PF00949.16	gi|297620428|ref|YP_003708565.1|	-	1.2e-05	24.7	0.1	2.7e-05	23.5	0.1	1.6	1	0	0	1	1	1	1	Peptidase	S7,	Flavivirus	NS3	serine	protease
Peptidase_S29	PF02907.10	gi|297620428|ref|YP_003708565.1|	-	0.00071	19.1	0.0	0.0014	18.1	0.0	1.5	1	0	0	1	1	1	1	Hepatitis	C	virus	NS3	protease
Peptidase_S46	PF10459.4	gi|297620428|ref|YP_003708565.1|	-	0.021	13.2	0.2	1	7.6	0.1	2.1	2	0	0	2	2	2	0	Peptidase	S46
Peptidase_S32	PF05579.8	gi|297620428|ref|YP_003708565.1|	-	0.052	12.5	0.2	4.7	6.0	0.0	2.1	2	0	0	2	2	2	0	Equine	arteritis	virus	serine	endopeptidase	S32
DUF31	PF01732.11	gi|297620428|ref|YP_003708565.1|	-	0.13	11.5	0.7	0.23	10.7	0.5	1.7	1	1	0	1	1	1	0	Putative	peptidase	(DUF31)
Peptidase_S3	PF00944.14	gi|297620428|ref|YP_003708565.1|	-	0.13	11.6	1.3	0.93	8.9	0.1	2.5	3	0	0	3	3	3	0	Alphavirus	core	protein
PEGA	PF08308.6	gi|297620430|ref|YP_003708567.1|	-	3.4e-09	36.3	0.0	5.2e-09	35.7	0.0	1.2	1	0	0	1	1	1	1	PEGA	domain
DUF1455	PF07306.6	gi|297620430|ref|YP_003708567.1|	-	0.032	14.2	0.0	0.052	13.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1455)
zf-TFIIB	PF13453.1	gi|297620430|ref|YP_003708567.1|	-	0.077	12.1	0.1	0.16	11.1	0.0	1.5	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
Gemini_mov	PF01708.11	gi|297620431|ref|YP_003708568.1|	-	0.1	12.1	0.2	0.25	10.8	0.1	1.7	1	0	0	1	1	1	0	Geminivirus	putative	movement	protein
Thy1	PF02511.10	gi|297620432|ref|YP_003708569.1|	-	4.4e-32	110.9	0.3	7.6e-25	87.3	0.3	2.6	3	0	0	3	3	3	2	Thymidylate	synthase	complementing	protein
Trp_Tyr_perm	PF03222.8	gi|297620433|ref|YP_003708570.1|	-	8.4e-105	350.8	30.1	9.9e-105	350.5	20.8	1.0	1	0	0	1	1	1	1	Tryptophan/tyrosine	permease	family
Trp_Tyr_perm	PF03222.8	gi|297620434|ref|YP_003708571.1|	-	5.7e-101	338.1	34.3	6.5e-101	338.0	23.8	1.0	1	0	0	1	1	1	1	Tryptophan/tyrosine	permease	family
Aa_trans	PF01490.13	gi|297620434|ref|YP_003708571.1|	-	1.2e-05	24.0	19.0	1.2e-05	24.0	13.2	2.9	2	2	0	2	2	2	1	Transmembrane	amino	acid	transporter	protein
IlvB_leader	PF08049.6	gi|297620434|ref|YP_003708571.1|	-	0.1	12.3	4.1	0.11	12.2	0.5	2.5	2	0	0	2	2	2	0	IlvB	leader	peptide
tRNA-synt_1b	PF00579.20	gi|297620435|ref|YP_003708572.1|	-	9.7e-75	251.3	0.0	1.2e-74	251.0	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
UvrB	PF12344.3	gi|297620436|ref|YP_003708573.1|	-	4.2e-17	61.4	2.2	8.4e-17	60.4	0.2	2.5	2	1	0	2	2	2	1	Ultra-violet	resistance	protein	B
ResIII	PF04851.10	gi|297620436|ref|YP_003708573.1|	-	4e-16	59.3	0.1	1.2e-13	51.3	0.0	2.6	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|297620436|ref|YP_003708573.1|	-	3e-15	55.8	0.1	1e-14	54.1	0.0	2.0	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
UVR	PF02151.14	gi|297620436|ref|YP_003708573.1|	-	1.3e-08	34.0	5.4	4.6e-08	32.3	3.7	2.0	1	0	0	1	1	1	1	UvrB/uvrC	motif
DEAD	PF00270.24	gi|297620436|ref|YP_003708573.1|	-	1e-05	25.1	0.0	0.00021	20.8	0.0	2.7	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
AAA_19	PF13245.1	gi|297620436|ref|YP_003708573.1|	-	0.00042	20.0	0.1	0.087	12.5	0.0	2.6	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_30	PF13604.1	gi|297620436|ref|YP_003708573.1|	-	0.0019	17.8	0.1	0.069	12.7	0.0	3.0	4	0	0	4	4	4	1	AAA	domain
Kinesin	PF00225.18	gi|297620436|ref|YP_003708573.1|	-	0.0077	14.9	0.0	0.013	14.2	0.0	1.2	1	0	0	1	1	1	1	Kinesin	motor	domain
Arch_ATPase	PF01637.13	gi|297620436|ref|YP_003708573.1|	-	0.0085	15.8	1.1	0.18	11.5	0.0	2.6	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_22	PF13401.1	gi|297620436|ref|YP_003708573.1|	-	0.079	13.1	0.0	0.53	10.4	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.1	gi|297620436|ref|YP_003708573.1|	-	0.08	12.8	0.3	0.94	9.3	0.0	3.0	2	1	1	3	3	3	0	AAA	domain
UvrD-helicase	PF00580.16	gi|297620436|ref|YP_003708573.1|	-	0.18	11.0	2.2	8	5.6	0.2	2.4	2	0	0	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
DNA_pol_B_palm	PF14792.1	gi|297620437|ref|YP_003708574.1|	-	0.006	16.6	0.4	0.021	14.8	0.0	2.1	2	1	0	2	2	2	1	DNA	polymerase	beta	palm
Pfg27	PF09216.5	gi|297620437|ref|YP_003708574.1|	-	0.01	15.4	0.8	0.019	14.5	0.6	1.5	1	0	0	1	1	1	0	Pfg27
Penicillinase_R	PF03965.11	gi|297620437|ref|YP_003708574.1|	-	0.11	12.5	0.8	0.28	11.2	0.5	1.7	1	1	0	1	1	1	0	Penicillinase	repressor
Spc24	PF08286.6	gi|297620437|ref|YP_003708574.1|	-	6.7	6.4	10.7	6.8	6.4	0.0	2.9	3	1	0	3	3	3	0	Spc24	subunit	of	Ndc80
Ank_2	PF12796.2	gi|297620438|ref|YP_003708575.1|	-	4.3e-25	87.8	0.5	1e-12	48.1	0.1	3.0	1	1	2	3	3	3	3	Ankyrin	repeats	(3	copies)
Ank	PF00023.25	gi|297620438|ref|YP_003708575.1|	-	4.7e-23	79.7	1.1	1.7e-08	33.8	0.1	4.8	5	0	0	5	5	5	3	Ankyrin	repeat
Ank_5	PF13857.1	gi|297620438|ref|YP_003708575.1|	-	3.1e-20	71.7	4.0	4e-11	42.7	0.1	4.0	2	1	2	4	4	4	2	Ankyrin	repeats	(many	copies)
Ank_4	PF13637.1	gi|297620438|ref|YP_003708575.1|	-	1.3e-19	70.1	3.7	5.2e-09	36.3	0.1	4.1	3	1	1	4	4	4	3	Ankyrin	repeats	(many	copies)
Ank_3	PF13606.1	gi|297620438|ref|YP_003708575.1|	-	1.2e-15	56.0	4.1	3.2e-05	23.7	0.0	6.0	6	1	0	6	6	6	3	Ankyrin	repeat
DUF530	PF04409.7	gi|297620438|ref|YP_003708575.1|	-	0.034	12.2	0.1	0.046	11.8	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF530)
Myc_target_1	PF15179.1	gi|297620438|ref|YP_003708575.1|	-	0.046	13.3	0.0	0.076	12.5	0.0	1.3	1	0	0	1	1	1	0	Myc	target	protein	1
HD	PF01966.17	gi|297620438|ref|YP_003708575.1|	-	0.08	12.9	0.0	0.2	11.6	0.0	1.7	1	0	0	1	1	1	0	HD	domain
Pkinase	PF00069.20	gi|297620439|ref|YP_003708576.1|	-	2.7e-10	39.8	0.1	2.7e-10	39.8	0.1	2.5	3	1	1	4	4	4	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|297620439|ref|YP_003708576.1|	-	3.8e-06	26.1	0.3	6.1e-06	25.4	0.2	1.4	1	0	0	1	1	1	1	Protein	tyrosine	kinase
DLD	PF14878.1	gi|297620439|ref|YP_003708576.1|	-	0.012	15.7	1.2	0.031	14.3	0.1	2.3	2	0	0	2	2	2	0	Death-like	domain	of	SPT6
L31	PF09784.4	gi|297620439|ref|YP_003708576.1|	-	0.74	9.9	9.0	0.71	9.9	0.1	2.9	3	0	0	3	3	3	0	Mitochondrial	ribosomal	protein	L31
SpoU_methylase	PF00588.14	gi|297620440|ref|YP_003708577.1|	-	8e-24	84.1	0.0	1e-23	83.7	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
4HBT	PF03061.17	gi|297620441|ref|YP_003708578.1|	-	7.4e-16	58.0	0.2	1e-15	57.6	0.1	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
DUF4442	PF14539.1	gi|297620441|ref|YP_003708578.1|	-	0.002	18.1	0.0	0.0031	17.5	0.0	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4442)
PhnA_Zn_Ribbon	PF08274.7	gi|297620442|ref|YP_003708579.1|	-	0.0095	15.6	2.0	0.93	9.3	0.0	2.2	2	0	0	2	2	2	2	PhnA	Zinc-Ribbon
Zn-ribbon_8	PF09723.5	gi|297620442|ref|YP_003708579.1|	-	0.012	15.5	0.7	0.019	14.9	0.5	1.3	1	0	0	1	1	1	0	Zinc	ribbon	domain
Guanylate_cyc_2	PF09778.4	gi|297620442|ref|YP_003708579.1|	-	0.03	13.5	0.2	0.032	13.4	0.2	1.1	1	0	0	1	1	1	0	Guanylylate	cyclase
zinc_ribbon_2	PF13240.1	gi|297620442|ref|YP_003708579.1|	-	0.038	13.4	1.9	0.26	10.8	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
HypA	PF01155.14	gi|297620442|ref|YP_003708579.1|	-	0.054	13.1	0.1	0.054	13.1	0.1	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DZR	PF12773.2	gi|297620442|ref|YP_003708579.1|	-	0.055	13.2	1.4	0.1	12.4	0.9	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|297620442|ref|YP_003708579.1|	-	0.059	12.5	0.9	1	8.6	0.2	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF164	PF02591.10	gi|297620442|ref|YP_003708579.1|	-	0.065	13.0	2.4	1.9	8.3	1.7	2.1	1	1	0	1	1	1	0	Putative	zinc	ribbon	domain
zf-tcix	PF14952.1	gi|297620442|ref|YP_003708579.1|	-	0.098	12.0	0.2	0.19	11.0	0.2	1.5	1	0	0	1	1	1	0	Putative	treble-clef,	zinc-finger,	Zn-binding
NMD3	PF04981.8	gi|297620442|ref|YP_003708579.1|	-	0.11	11.6	1.2	0.16	11.0	0.8	1.3	1	1	0	1	1	1	0	NMD3	family
zf-ISL3	PF14690.1	gi|297620442|ref|YP_003708579.1|	-	0.34	10.9	0.3	0.34	10.9	0.2	2.2	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
ExbD	PF02472.11	gi|297620444|ref|YP_003708581.1|	-	6.7e-22	77.8	0.4	8e-22	77.6	0.3	1.0	1	0	0	1	1	1	1	Biopolymer	transport	protein	ExbD/TolR
MIF4G_like_2	PF09090.6	gi|297620444|ref|YP_003708581.1|	-	0.058	12.6	0.3	0.2	10.8	0.1	1.7	2	0	0	2	2	2	0	MIF4G	like
MotA_ExbB	PF01618.11	gi|297620445|ref|YP_003708582.1|	-	9.4e-30	103.0	2.8	1.3e-29	102.5	1.9	1.2	1	0	0	1	1	1	1	MotA/TolQ/ExbB	proton	channel	family
Erf4	PF10256.4	gi|297620445|ref|YP_003708582.1|	-	0.091	12.6	0.7	0.15	11.9	0.5	1.5	1	0	0	1	1	1	0	Golgin	subfamily	A	member	7/ERF4	family
DUF2619	PF10942.3	gi|297620445|ref|YP_003708582.1|	-	0.19	11.7	3.4	0.12	12.3	0.5	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2619)
PEMT	PF04191.8	gi|297620445|ref|YP_003708582.1|	-	8.2	6.5	7.8	3.1	7.9	0.3	2.5	3	0	0	3	3	3	0	Phospholipid	methyltransferase
TPR_16	PF13432.1	gi|297620446|ref|YP_003708583.1|	-	2.7e-19	69.3	38.8	0.00054	20.5	0.7	9.8	7	3	4	11	11	10	7	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|297620446|ref|YP_003708583.1|	-	8.4e-19	66.9	37.0	0.00039	20.0	0.5	7.7	7	1	1	8	8	8	6	TPR	repeat
TPR_12	PF13424.1	gi|297620446|ref|YP_003708583.1|	-	1.5e-15	56.8	29.7	0.029	14.3	0.0	8.0	4	2	3	8	8	8	6	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|297620446|ref|YP_003708583.1|	-	9.6e-15	53.4	40.2	0.0018	17.7	0.0	10.6	11	0	0	11	11	10	6	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297620446|ref|YP_003708583.1|	-	2.4e-14	52.0	50.4	0.0013	18.4	0.0	12.9	13	0	0	13	13	13	6	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297620446|ref|YP_003708583.1|	-	3e-09	35.9	32.6	0.26	11.1	0.0	12.0	12	0	0	12	12	12	4	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297620446|ref|YP_003708583.1|	-	4.5e-09	36.3	33.8	3.6e-06	27.0	0.4	8.0	5	2	4	9	9	8	3	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_19	PF14559.1	gi|297620446|ref|YP_003708583.1|	-	1.1e-08	35.2	34.1	0.11	12.8	0.3	8.4	6	2	1	8	8	8	4	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|297620446|ref|YP_003708583.1|	-	1.5e-07	31.3	53.8	0.093	13.2	0.2	13.5	17	0	0	17	17	15	5	Tetratricopeptide	repeat
TPR_21	PF09976.4	gi|297620446|ref|YP_003708583.1|	-	5.5e-07	29.6	12.9	1.8e-06	27.9	1.5	4.7	3	2	2	5	5	5	1	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|297620446|ref|YP_003708583.1|	-	1.7e-06	27.3	12.4	0.1	12.4	0.0	7.9	9	0	0	9	9	9	1	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|297620446|ref|YP_003708583.1|	-	6.6e-05	22.7	17.5	0.96	9.8	0.1	8.8	10	0	0	10	10	9	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|297620446|ref|YP_003708583.1|	-	0.00052	20.4	36.3	0.46	11.2	0.9	11.2	10	2	3	13	13	13	2	Tetratricopeptide	repeat
TPR_4	PF07721.9	gi|297620446|ref|YP_003708583.1|	-	0.05	14.0	0.9	0.05	14.0	0.6	5.9	5	0	0	5	5	4	0	Tetratricopeptide	repeat
Hc1	PF07432.8	gi|297620447|ref|YP_003708584.1|	-	1.9e-26	92.6	52.7	2.5e-25	89.0	36.6	2.0	1	1	0	1	1	1	1	Histone	H1-like	protein	Hc1
HC2	PF07382.6	gi|297620447|ref|YP_003708584.1|	-	0.00044	20.1	67.9	0.00068	19.5	47.1	1.2	1	0	0	1	1	1	1	Histone	H1-like	nucleoprotein	HC2
SRP-alpha_N	PF04086.8	gi|297620447|ref|YP_003708584.1|	-	0.17	11.2	17.5	0.19	11.0	12.1	1.1	1	0	0	1	1	1	0	Signal	recognition	particle,	alpha	subunit,	N-terminal
PLRV_ORF5	PF01690.12	gi|297620447|ref|YP_003708584.1|	-	1.5	7.8	10.5	1.8	7.6	7.3	1.0	1	0	0	1	1	1	0	Potato	leaf	roll	virus	readthrough	protein
DUF1675	PF07897.6	gi|297620447|ref|YP_003708584.1|	-	1.7	8.4	11.9	1.8	8.3	8.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1675)
MCPVI	PF02993.9	gi|297620447|ref|YP_003708584.1|	-	2.4	8.2	12.5	2.6	8.1	8.7	1.1	1	0	0	1	1	1	0	Minor	capsid	protein	VI
SPATIAL	PF15256.1	gi|297620447|ref|YP_003708584.1|	-	2.6	8.0	10.2	2.8	7.9	7.1	1.1	1	0	0	1	1	1	0	SPATIAL
DNA_pol_viral_N	PF00242.12	gi|297620447|ref|YP_003708584.1|	-	6.7	5.6	9.9	8.3	5.3	6.8	1.1	1	0	0	1	1	1	0	DNA	polymerase	(viral)	N-terminal	domain
RR_TM4-6	PF06459.7	gi|297620447|ref|YP_003708584.1|	-	9.8	5.9	13.9	14	5.5	9.6	1.3	1	0	0	1	1	1	0	Ryanodine	Receptor	TM	4-6
tRNA_U5-meth_tr	PF05958.6	gi|297620448|ref|YP_003708585.1|	-	4.7e-31	107.7	0.0	1.4e-28	99.5	0.0	2.5	2	1	0	2	2	2	2	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_26	PF13659.1	gi|297620448|ref|YP_003708585.1|	-	8e-11	41.9	0.0	1.8e-10	40.8	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297620448|ref|YP_003708585.1|	-	1.1e-10	41.2	0.0	1.8e-10	40.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297620448|ref|YP_003708585.1|	-	1.2e-09	38.7	0.0	2.8e-09	37.5	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|297620448|ref|YP_003708585.1|	-	1.8e-07	30.7	0.0	2.9e-07	30.0	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Met_10	PF02475.11	gi|297620448|ref|YP_003708585.1|	-	2.1e-07	30.7	0.0	3.4e-07	30.0	0.0	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
MTS	PF05175.9	gi|297620448|ref|YP_003708585.1|	-	1.5e-06	27.7	0.0	2.6e-06	26.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_15	PF09445.5	gi|297620448|ref|YP_003708585.1|	-	3.7e-06	26.5	0.0	1.1e-05	25.0	0.0	1.7	2	0	0	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
UPF0020	PF01170.13	gi|297620448|ref|YP_003708585.1|	-	5.2e-06	26.1	0.0	9.9e-06	25.2	0.0	1.4	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
PrmA	PF06325.8	gi|297620448|ref|YP_003708585.1|	-	7.1e-06	25.3	0.0	1.2e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
PCMT	PF01135.14	gi|297620448|ref|YP_003708585.1|	-	0.00012	21.6	0.0	0.0002	20.9	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_4	PF02390.12	gi|297620448|ref|YP_003708585.1|	-	0.0012	17.9	0.0	0.0023	17.0	0.0	1.4	1	0	0	1	1	1	1	Putative	methyltransferase
RrnaAD	PF00398.15	gi|297620448|ref|YP_003708585.1|	-	0.0014	17.7	0.0	0.0023	17.0	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_11	PF08241.7	gi|297620448|ref|YP_003708585.1|	-	0.0024	18.3	0.0	0.005	17.3	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|297620448|ref|YP_003708585.1|	-	0.0028	17.2	0.0	0.0046	16.4	0.0	1.3	1	0	0	1	1	1	1	DNA	methylase
Methyltransf_12	PF08242.7	gi|297620448|ref|YP_003708585.1|	-	0.013	15.9	0.0	0.027	14.9	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297620448|ref|YP_003708585.1|	-	0.056	13.8	0.0	0.11	12.8	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
DOT1	PF08123.8	gi|297620448|ref|YP_003708585.1|	-	0.15	11.3	0.0	0.36	10.1	0.0	1.6	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
TGT	PF01702.13	gi|297620449|ref|YP_003708586.1|	-	1.8e-97	325.2	0.0	2.3e-97	324.9	0.0	1.1	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
YajC	PF02699.10	gi|297620450|ref|YP_003708587.1|	-	1.2e-20	72.9	0.9	1.8e-20	72.3	0.6	1.2	1	0	0	1	1	1	1	Preprotein	translocase	subunit
DUF4131	PF13567.1	gi|297620450|ref|YP_003708587.1|	-	0.012	15.0	0.0	0.014	14.7	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
T2SM	PF04612.7	gi|297620450|ref|YP_003708587.1|	-	0.015	15.1	0.0	0.024	14.4	0.0	1.2	1	0	0	1	1	1	0	Type	II	secretion	system	(T2SS),	protein	M
UPF0104	PF03706.8	gi|297620450|ref|YP_003708587.1|	-	0.018	14.3	0.0	0.021	14.1	0.0	1.0	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0104)
PCMT	PF01135.14	gi|297620451|ref|YP_003708588.1|	-	1.1e-61	208.0	0.0	1.2e-61	207.8	0.0	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.1	gi|297620451|ref|YP_003708588.1|	-	1.3e-07	31.3	0.0	1.9e-07	30.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297620451|ref|YP_003708588.1|	-	2.1e-06	28.2	0.0	3.9e-06	27.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|297620451|ref|YP_003708588.1|	-	0.00032	19.8	0.0	0.00052	19.1	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_23	PF13489.1	gi|297620451|ref|YP_003708588.1|	-	0.002	17.8	0.0	0.0031	17.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297620451|ref|YP_003708588.1|	-	0.0029	18.0	0.0	0.013	15.9	0.0	2.0	2	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297620451|ref|YP_003708588.1|	-	0.0031	17.5	0.0	0.0099	15.8	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Y_Y_Y	PF07495.8	gi|297620454|ref|YP_003708591.1|	-	0.00015	21.4	0.3	4.7	7.0	0.0	4.4	4	1	1	5	5	5	2	Y_Y_Y	domain
CarboxypepD_reg	PF13620.1	gi|297620454|ref|YP_003708591.1|	-	0.00056	19.9	0.0	3.7	7.6	0.0	4.1	4	0	0	4	4	4	1	Carboxypeptidase	regulatory-like	domain
PEGA	PF08308.6	gi|297620454|ref|YP_003708591.1|	-	0.0088	15.8	0.0	2.8	7.8	0.0	3.7	3	0	0	3	3	3	1	PEGA	domain
Cna_B	PF05738.8	gi|297620454|ref|YP_003708591.1|	-	0.017	14.8	2.2	10	5.9	0.0	4.6	5	0	0	5	5	5	0	Cna	protein	B-type	domain
DUF3244	PF11589.3	gi|297620454|ref|YP_003708591.1|	-	0.045	13.4	0.0	6.8	6.4	0.0	3.4	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3244)
Metallophos	PF00149.23	gi|297620455|ref|YP_003708592.1|	-	7.3e-06	25.5	0.4	2.3e-05	23.8	0.3	1.9	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
PhoD	PF09423.5	gi|297620455|ref|YP_003708592.1|	-	7e-05	21.5	0.1	0.00032	19.4	0.0	2.0	2	1	0	2	2	2	1	PhoD-like	phosphatase
Na_H_Exchanger	PF00999.16	gi|297620456|ref|YP_003708593.1|	-	1.6e-61	207.9	45.5	2.1e-61	207.5	31.5	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_N	PF02254.13	gi|297620456|ref|YP_003708593.1|	-	1.3e-22	80.0	0.9	3.4e-22	78.6	0.6	1.7	2	0	0	2	2	1	1	TrkA-N	domain
NAD_binding_7	PF13241.1	gi|297620456|ref|YP_003708593.1|	-	3.6e-05	23.9	0.1	7.2e-05	22.9	0.0	1.4	1	0	0	1	1	1	1	Putative	NAD(P)-binding
NAD_binding_2	PF03446.10	gi|297620456|ref|YP_003708593.1|	-	5.5e-05	23.0	0.0	9.7e-05	22.2	0.0	1.3	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
B12-binding	PF02310.14	gi|297620456|ref|YP_003708593.1|	-	0.00014	21.7	0.1	0.00036	20.4	0.1	1.7	1	0	0	1	1	1	1	B12	binding	domain
3HCDH_N	PF02737.13	gi|297620456|ref|YP_003708593.1|	-	0.00041	20.0	0.0	0.00071	19.2	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|297620456|ref|YP_003708593.1|	-	0.002	17.1	0.1	0.0029	16.6	0.1	1.2	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
F420_oxidored	PF03807.12	gi|297620456|ref|YP_003708593.1|	-	0.0034	17.7	0.2	0.0086	16.4	0.1	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|297620456|ref|YP_003708593.1|	-	0.011	14.9	0.0	0.017	14.2	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.11	gi|297620456|ref|YP_003708593.1|	-	0.024	14.0	0.2	0.042	13.2	0.1	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
UDPG_MGDP_dh_N	PF03721.9	gi|297620456|ref|YP_003708593.1|	-	0.048	13.0	0.1	0.1	11.9	0.1	1.6	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_10	PF13460.1	gi|297620456|ref|YP_003708593.1|	-	0.078	12.9	0.1	0.14	12.1	0.1	1.4	1	0	0	1	1	1	0	NADH(P)-binding
Pyr_redox	PF00070.22	gi|297620456|ref|YP_003708593.1|	-	0.11	12.8	0.1	0.56	10.6	0.0	2.2	3	0	0	3	3	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
CitMHS	PF03600.11	gi|297620457|ref|YP_003708594.1|	-	2.9e-18	65.5	23.1	4.5e-18	64.9	16.0	1.3	1	0	0	1	1	1	1	Citrate	transporter
CAAD	PF14159.1	gi|297620457|ref|YP_003708594.1|	-	0.031	13.9	1.1	1.1	8.9	0.1	3.3	3	0	0	3	3	3	0	CAAD	domains	of	cyanobacterial	aminoacyl-tRNA	synthetase
TLC	PF03219.9	gi|297620458|ref|YP_003708595.1|	-	7.8e-172	572.1	23.9	9.3e-172	571.8	16.6	1.0	1	0	0	1	1	1	1	TLC	ATP/ADP	transporter
Epiglycanin_C	PF14654.1	gi|297620458|ref|YP_003708595.1|	-	0.0089	16.0	0.0	0.24	11.4	0.0	2.7	2	0	0	2	2	2	1	Mucin,	catalytic,	TM	and	cytoplasmic	tail	region
DUF1049	PF06305.6	gi|297620458|ref|YP_003708595.1|	-	1.9	8.0	9.1	4.8	6.7	0.5	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1049)
HSP90	PF00183.13	gi|297620459|ref|YP_003708596.1|	-	5.4e-53	180.2	8.5	7.3e-51	173.1	4.2	2.1	1	1	1	2	2	2	2	Hsp90	protein
HATPase_c_3	PF13589.1	gi|297620459|ref|YP_003708596.1|	-	1.3e-10	41.0	0.2	3.2e-10	39.8	0.2	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.21	gi|297620459|ref|YP_003708596.1|	-	6.8e-09	35.4	0.0	2.2e-08	33.7	0.0	1.8	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Fer2	PF00111.22	gi|297620460|ref|YP_003708597.1|	-	2.7e-11	43.0	0.0	5.3e-11	42.1	0.0	1.5	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
NAD_binding_1	PF00175.16	gi|297620460|ref|YP_003708597.1|	-	4.7e-08	33.5	0.0	1.5e-07	31.9	0.0	1.8	2	0	0	2	2	2	1	Oxidoreductase	NAD-binding	domain
FAD_binding_6	PF00970.19	gi|297620460|ref|YP_003708597.1|	-	9.8e-08	32.0	0.0	5.4e-07	29.6	0.0	2.0	2	0	0	2	2	2	1	Oxidoreductase	FAD-binding	domain
NAD_synthase	PF02540.12	gi|297620461|ref|YP_003708598.1|	-	5.8e-73	244.7	0.0	1.2e-72	243.6	0.0	1.5	1	0	0	1	1	1	1	NAD	synthase
CN_hydrolase	PF00795.17	gi|297620461|ref|YP_003708598.1|	-	2.2e-12	46.7	0.0	3.3e-12	46.1	0.0	1.3	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
Asn_synthase	PF00733.16	gi|297620461|ref|YP_003708598.1|	-	3.4e-05	23.4	0.1	7e-05	22.4	0.0	1.5	2	0	0	2	2	2	1	Asparagine	synthase
tRNA_Me_trans	PF03054.11	gi|297620461|ref|YP_003708598.1|	-	6e-05	21.7	0.0	8.9e-05	21.1	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyl	transferase
QueC	PF06508.8	gi|297620461|ref|YP_003708598.1|	-	0.0019	17.5	0.0	0.0037	16.5	0.0	1.4	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
RAMPs	PF03787.10	gi|297620463|ref|YP_003708600.1|	-	0.014	15.2	0.0	0.014	15.2	0.0	1.2	1	0	0	1	1	1	0	RAMP	superfamily
DDE_Tnp_1_assoc	PF13808.1	gi|297620464|ref|YP_003708601.1|	-	4.9e-26	90.2	0.2	1.3e-25	88.8	0.0	1.8	2	0	0	2	2	2	1	DDE_Tnp_1-associated
DDE_Tnp_1	PF01609.16	gi|297620464|ref|YP_003708601.1|	-	2.1e-18	66.6	0.0	7.4e-18	64.8	0.0	1.8	1	1	0	1	1	1	1	Transposase	DDE	domain
DEK_C	PF08766.6	gi|297620464|ref|YP_003708601.1|	-	0.083	12.6	0.0	0.15	11.8	0.0	1.4	1	0	0	1	1	1	0	DEK	C	terminal	domain
ATP-grasp_3	PF02655.9	gi|297620465|ref|YP_003708602.1|	-	0.0002	21.2	0.0	0.00036	20.4	0.0	1.4	1	1	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.6	gi|297620465|ref|YP_003708602.1|	-	0.0028	17.1	0.0	0.0041	16.6	0.0	1.2	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
THP2	PF09432.5	gi|297620465|ref|YP_003708602.1|	-	0.0057	16.5	0.4	0.013	15.3	0.1	1.7	1	1	0	1	1	1	1	Tho	complex	subunit	THP2
ATP-grasp_4	PF13535.1	gi|297620465|ref|YP_003708602.1|	-	0.0085	15.8	0.0	0.012	15.3	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
Crinivirus_P26	PF07416.6	gi|297620465|ref|YP_003708602.1|	-	0.038	13.4	1.2	0.23	10.9	0.2	2.0	1	1	1	2	2	2	0	Crinivirus	P26	protein
Bactofilin	PF04519.8	gi|297620466|ref|YP_003708603.1|	-	0.01	15.7	2.4	0.33	10.9	0.1	2.6	2	1	0	2	2	2	0	Polymer-forming	cytoskeletal
DDE_3	PF13358.1	gi|297620467|ref|YP_003708604.1|	-	7.8e-29	100.2	0.0	1.3e-28	99.6	0.0	1.4	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.1	gi|297620467|ref|YP_003708604.1|	-	7.4e-19	67.0	0.1	1.9e-18	65.7	0.1	1.7	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_29	PF13551.1	gi|297620467|ref|YP_003708604.1|	-	9.3e-10	38.6	0.0	2.4e-09	37.3	0.0	1.7	2	0	0	2	2	1	1	Winged	helix-turn	helix
rve	PF00665.21	gi|297620467|ref|YP_003708604.1|	-	3.8e-09	36.6	0.0	5.6e-08	32.9	0.0	2.3	2	0	0	2	2	2	1	Integrase	core	domain
HTH_23	PF13384.1	gi|297620467|ref|YP_003708604.1|	-	5.3e-07	29.0	0.0	1.4e-06	27.7	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|297620467|ref|YP_003708604.1|	-	2.3e-05	24.2	0.1	8.5e-05	22.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|297620467|ref|YP_003708604.1|	-	0.0003	20.1	0.0	0.00064	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
DDE_Tnp_ISAZ013	PF07592.6	gi|297620467|ref|YP_003708604.1|	-	0.0023	16.7	0.2	0.11	11.2	0.1	2.2	2	0	0	2	2	2	1	Rhodopirellula	transposase	DDE	domain
Terminase_5	PF06056.7	gi|297620467|ref|YP_003708604.1|	-	0.0027	17.2	0.0	0.0054	16.2	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
rve_3	PF13683.1	gi|297620467|ref|YP_003708604.1|	-	0.0041	16.6	0.0	0.014	14.9	0.0	1.9	2	0	0	2	2	1	1	Integrase	core	domain
Sigma70_r4	PF04545.11	gi|297620467|ref|YP_003708604.1|	-	0.012	14.8	0.0	0.035	13.4	0.0	1.8	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_32	PF13565.1	gi|297620467|ref|YP_003708604.1|	-	0.015	16.1	1.8	5	7.9	0.0	3.5	2	1	2	4	4	3	0	Homeodomain-like	domain
HTH_40	PF14493.1	gi|297620467|ref|YP_003708604.1|	-	0.015	15.5	0.0	0.039	14.1	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|297620467|ref|YP_003708604.1|	-	0.042	13.4	0.1	0.84	9.2	0.1	2.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|297620467|ref|YP_003708604.1|	-	0.065	12.8	0.0	0.16	11.6	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
GerE	PF00196.14	gi|297620467|ref|YP_003708604.1|	-	0.08	12.2	0.1	0.3	10.4	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.1	gi|297620467|ref|YP_003708604.1|	-	1.8	8.9	6.1	6	7.2	0.2	3.3	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
DnaJ	PF00226.26	gi|297620468|ref|YP_003708605.1|	-	2.2e-05	24.0	1.5	5.3e-05	22.8	1.1	1.7	1	0	0	1	1	1	1	DnaJ	domain
GCP5-Mod21	PF14609.1	gi|297620468|ref|YP_003708605.1|	-	0.0034	15.5	2.0	0.0043	15.2	1.4	1.1	1	0	0	1	1	1	1	gamma-Tubulin	ring	complex	non-core	subunit	mod21
TMCO5	PF14992.1	gi|297620468|ref|YP_003708605.1|	-	0.017	14.2	1.7	0.027	13.6	1.2	1.2	1	0	0	1	1	1	0	TMCO5	family
PHD_2	PF13831.1	gi|297620468|ref|YP_003708605.1|	-	0.026	13.8	0.3	0.048	12.9	0.2	1.4	1	0	0	1	1	1	0	PHD-finger
DUF2058	PF09831.4	gi|297620468|ref|YP_003708605.1|	-	0.03	14.1	2.2	0.05	13.4	1.5	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2058)
Redoxin	PF08534.5	gi|297620469|ref|YP_003708606.1|	-	2.7e-19	69.1	0.0	3.1e-19	68.9	0.0	1.0	1	0	0	1	1	1	1	Redoxin
AhpC-TSA	PF00578.16	gi|297620469|ref|YP_003708606.1|	-	2.8e-15	56.1	0.0	3.3e-15	55.8	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
DUF2511	PF10709.4	gi|297620469|ref|YP_003708606.1|	-	0.065	13.5	0.0	0.11	12.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2511)
tRNA-synt_2	PF00152.15	gi|297620471|ref|YP_003708608.1|	-	3.1e-53	180.7	0.2	3.9e-53	180.3	0.1	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2d	PF01409.15	gi|297620471|ref|YP_003708608.1|	-	0.0002	20.6	1.4	0.089	11.9	0.0	2.5	2	1	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2b	PF00587.20	gi|297620471|ref|YP_003708608.1|	-	0.0014	18.2	0.2	0.013	15.0	0.1	2.1	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
EFP_N	PF08207.7	gi|297620472|ref|YP_003708609.1|	-	3.1e-27	94.2	0.4	6.2e-26	90.0	0.3	2.4	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	KOW-like	domain
Elong-fact-P_C	PF09285.6	gi|297620472|ref|YP_003708609.1|	-	2.5e-22	77.9	1.0	4.6e-22	77.1	0.4	1.7	2	0	0	2	2	2	1	Elongation	factor	P,	C-terminal
EFP	PF01132.15	gi|297620472|ref|YP_003708609.1|	-	9.6e-19	66.8	1.1	4.5e-18	64.6	0.2	2.1	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	OB	domain
Cas_CXXC_CXXC	PF09706.5	gi|297620474|ref|YP_003708611.1|	-	0.011	15.9	1.0	1.4	9.1	0.0	2.1	2	0	0	2	2	2	0	CRISPR-associated	protein	(Cas_CXXC_CXXC)
Zn-ribbon_8	PF09723.5	gi|297620474|ref|YP_003708611.1|	-	0.026	14.4	7.2	0.066	13.1	5.0	1.6	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-H2C2_2	PF13465.1	gi|297620474|ref|YP_003708611.1|	-	0.046	14.0	4.5	0.33	11.3	0.3	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
UPF0547	PF10571.4	gi|297620474|ref|YP_003708611.1|	-	0.053	13.2	4.6	2.7	7.7	0.7	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DUF1220	PF06758.8	gi|297620474|ref|YP_003708611.1|	-	0.082	12.7	0.4	1.2	8.9	0.1	2.0	1	1	1	2	2	2	0	Repeat	of	unknown	function	(DUF1220)
zf-RING_3	PF14369.1	gi|297620474|ref|YP_003708611.1|	-	0.087	12.8	2.5	1	9.3	0.0	2.2	2	0	0	2	2	2	0	zinc-finger
A2L_zn_ribbon	PF08792.5	gi|297620474|ref|YP_003708611.1|	-	0.12	11.8	3.4	2.4	7.7	0.7	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
HypA	PF01155.14	gi|297620474|ref|YP_003708611.1|	-	0.15	11.7	0.6	0.18	11.4	0.4	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-C2H2_4	PF13894.1	gi|297620474|ref|YP_003708611.1|	-	0.16	12.3	5.6	3.9	8.0	0.9	2.4	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zf-ribbon_3	PF13248.1	gi|297620474|ref|YP_003708611.1|	-	0.22	10.7	3.7	2.6	7.3	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Prok-RING_4	PF14447.1	gi|297620474|ref|YP_003708611.1|	-	0.26	10.8	3.1	0.33	10.5	0.7	1.9	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	4
zinc_ribbon_4	PF13717.1	gi|297620474|ref|YP_003708611.1|	-	0.3	10.8	6.6	0.36	10.5	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|297620474|ref|YP_003708611.1|	-	0.31	10.6	6.8	0.32	10.6	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
DM	PF00751.13	gi|297620474|ref|YP_003708611.1|	-	0.33	10.4	3.6	1.5	8.4	0.4	2.1	2	0	0	2	2	2	0	DM	DNA	binding	domain
Rubredoxin	PF00301.15	gi|297620474|ref|YP_003708611.1|	-	0.39	10.6	5.6	7.3	6.5	1.2	2.2	1	1	1	2	2	2	0	Rubredoxin
Auto_anti-p27	PF06677.7	gi|297620474|ref|YP_003708611.1|	-	0.48	10.2	3.1	6.5	6.6	0.1	2.2	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DUF3039	PF11238.3	gi|297620474|ref|YP_003708611.1|	-	0.49	9.8	3.7	4.8	6.6	0.5	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3039)
zf-FPG_IleRS	PF06827.9	gi|297620474|ref|YP_003708611.1|	-	0.49	10.1	0.1	0.49	10.1	0.1	2.3	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zf-C2H2_6	PF13912.1	gi|297620474|ref|YP_003708611.1|	-	1.9	8.4	5.0	8.1	6.5	0.8	2.4	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zf-C2H2	PF00096.21	gi|297620474|ref|YP_003708611.1|	-	5.7	7.4	8.1	13	6.4	0.3	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
PNP_UDP_1	PF01048.15	gi|297620475|ref|YP_003708612.1|	-	1.3e-23	83.1	0.0	1.6e-23	82.9	0.0	1.1	1	0	0	1	1	1	1	Phosphorylase	superfamily
2OG-FeII_Oxy_3	PF13640.1	gi|297620476|ref|YP_003708613.1|	-	6.1e-10	39.5	0.0	1.2e-09	38.5	0.0	1.5	1	0	0	1	1	1	1	2OG-Fe(II)	oxygenase	superfamily
2OG-FeII_Oxy_4	PF13661.1	gi|297620476|ref|YP_003708613.1|	-	4.3e-05	23.0	1.6	0.0001	21.8	0.1	2.2	2	1	1	3	3	3	1	2OG-Fe(II)	oxygenase	superfamily
TRCF	PF03461.10	gi|297620477|ref|YP_003708614.1|	-	1.1e-23	83.0	0.0	2.9e-23	81.7	0.0	1.7	1	0	0	1	1	1	1	TRCF	domain
CarD_CdnL_TRCF	PF02559.11	gi|297620477|ref|YP_003708614.1|	-	1.8e-23	82.4	0.0	5.9e-23	80.7	0.0	2.0	1	0	0	1	1	1	1	CarD-like/TRCF	domain
DEAD	PF00270.24	gi|297620477|ref|YP_003708614.1|	-	2.5e-22	79.1	0.2	5.6e-20	71.5	0.1	2.7	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|297620477|ref|YP_003708614.1|	-	2e-14	53.1	0.2	1.2e-13	50.7	0.0	2.2	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
SNF2_N	PF00176.18	gi|297620477|ref|YP_003708614.1|	-	1.3e-05	24.2	0.0	0.0024	16.7	0.0	2.2	2	0	0	2	2	2	2	SNF2	family	N-terminal	domain
RC-P840_PscD	PF10657.4	gi|297620477|ref|YP_003708614.1|	-	0.05	13.4	0.2	6.5	6.5	0.0	2.4	2	0	0	2	2	2	0	Photosystem	P840	reaction	centre	protein	PscD
AAA_22	PF13401.1	gi|297620477|ref|YP_003708614.1|	-	0.31	11.1	2.5	1.6	8.8	0.1	3.2	3	1	0	3	3	3	0	AAA	domain
tRNA-synt_2c	PF01411.14	gi|297620478|ref|YP_003708615.1|	-	2.2e-218	726.0	0.0	5e-218	724.8	0.0	1.5	2	0	0	2	2	2	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|297620478|ref|YP_003708615.1|	-	7.8e-15	54.4	0.3	2.3e-14	52.9	0.2	1.9	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DHHA1	PF02272.14	gi|297620478|ref|YP_003708615.1|	-	3.4e-13	49.0	0.8	8e-13	47.8	0.6	1.7	1	0	0	1	1	1	1	DHHA1	domain
DUF2205	PF10224.4	gi|297620478|ref|YP_003708615.1|	-	3.6	7.2	12.6	0.17	11.4	2.1	3.5	4	0	0	4	4	4	0	Predicted	coiled-coil	protein	(DUF2205)
DUF972	PF06156.8	gi|297620478|ref|YP_003708615.1|	-	7.3	6.9	8.4	1.4	9.3	0.8	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF972)
FlgN	PF05130.7	gi|297620480|ref|YP_003708617.1|	-	0.091	13.0	0.1	0.17	12.1	0.1	1.4	1	0	0	1	1	1	0	FlgN	protein
PhnA	PF03831.9	gi|297620481|ref|YP_003708618.1|	-	3.2e-28	96.9	8.3	3.2e-28	96.9	5.8	1.3	1	1	0	1	1	1	1	PhnA	protein
PhnA_Zn_Ribbon	PF08274.7	gi|297620481|ref|YP_003708618.1|	-	1.8e-11	43.6	5.2	2.9e-11	42.9	3.6	1.3	1	0	0	1	1	1	1	PhnA	Zinc-Ribbon
zinc_ribbon_5	PF13719.1	gi|297620481|ref|YP_003708618.1|	-	0.013	15.0	1.2	0.54	9.8	0.8	2.6	1	1	0	1	1	1	0	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|297620481|ref|YP_003708618.1|	-	0.016	14.6	1.1	0.27	10.7	0.7	2.3	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|297620481|ref|YP_003708618.1|	-	0.033	14.0	1.0	0.05	13.4	0.7	1.3	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|297620481|ref|YP_003708618.1|	-	0.035	13.7	1.7	1.3	8.7	1.2	2.7	1	1	0	1	1	1	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|297620481|ref|YP_003708618.1|	-	0.044	13.4	0.4	0.091	12.4	0.3	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
TF_Zn_Ribbon	PF08271.7	gi|297620481|ref|YP_003708618.1|	-	0.055	12.8	1.1	0.14	11.5	0.8	1.8	1	0	0	1	1	1	0	TFIIB	zinc-binding
IBR	PF01485.16	gi|297620481|ref|YP_003708618.1|	-	0.1	12.4	0.8	0.17	11.7	0.6	1.4	1	0	0	1	1	1	0	IBR	domain
DUF4261	PF14080.1	gi|297620481|ref|YP_003708618.1|	-	0.11	12.2	0.1	0.19	11.5	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4261)
DUF2387	PF09526.5	gi|297620481|ref|YP_003708618.1|	-	0.24	11.3	0.9	0.53	10.2	0.6	1.5	1	1	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
TFIIS_C	PF01096.13	gi|297620481|ref|YP_003708618.1|	-	0.31	10.6	1.8	13	5.5	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
DUF3039	PF11238.3	gi|297620481|ref|YP_003708618.1|	-	1.2	8.5	3.9	0.8	9.2	0.5	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3039)
zf-ISL3	PF14690.1	gi|297620481|ref|YP_003708618.1|	-	1.8	8.6	6.0	12	6.0	0.1	3.1	2	1	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-ribbon_3	PF13248.1	gi|297620481|ref|YP_003708618.1|	-	2	7.7	4.6	12	5.2	0.4	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
Sulfate_transp	PF00916.15	gi|297620482|ref|YP_003708619.1|	-	1.1e-71	241.1	12.4	1.1e-71	241.1	8.6	1.9	1	1	0	1	1	1	1	Sulfate	transporter	family
Sulfate_tra_GLY	PF13792.1	gi|297620482|ref|YP_003708619.1|	-	3.4e-21	74.6	3.4	3.4e-21	74.6	2.4	3.7	6	0	0	6	6	6	1	Sulfate	transporter	N-terminal	domain	with	GLY	motif
STAS	PF01740.16	gi|297620482|ref|YP_003708619.1|	-	1.7e-13	49.9	0.0	3.4e-13	49.0	0.0	1.4	1	0	0	1	1	1	1	STAS	domain
Transketolase_N	PF00456.16	gi|297620483|ref|YP_003708620.1|	-	6.4e-133	442.6	0.0	8.1e-133	442.3	0.0	1.1	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
Transket_pyr	PF02779.19	gi|297620483|ref|YP_003708620.1|	-	7.6e-38	129.7	0.0	1.8e-37	128.5	0.0	1.6	2	0	0	2	2	2	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|297620483|ref|YP_003708620.1|	-	2.4e-07	30.7	0.0	6.2e-07	29.3	0.0	1.7	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
DXP_synthase_N	PF13292.1	gi|297620483|ref|YP_003708620.1|	-	7.9e-05	21.7	0.0	0.25	10.2	0.0	2.8	1	1	1	2	2	2	2	1-deoxy-D-xylulose-5-phosphate	synthase
TPP_enzyme_C	PF02775.16	gi|297620483|ref|YP_003708620.1|	-	0.011	15.3	0.0	0.19	11.3	0.0	2.9	2	1	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
E1_dh	PF00676.15	gi|297620483|ref|YP_003708620.1|	-	0.017	13.8	0.0	0.029	13.0	0.0	1.4	1	0	0	1	1	1	0	Dehydrogenase	E1	component
URO-D	PF01208.12	gi|297620484|ref|YP_003708621.1|	-	1.3e-124	415.6	0.1	1.4e-124	415.4	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
Amino_oxidase	PF01593.19	gi|297620485|ref|YP_003708622.1|	-	5.6e-25	88.3	0.0	8.4e-25	87.7	0.0	1.3	1	0	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
NAD_binding_8	PF13450.1	gi|297620485|ref|YP_003708622.1|	-	1.7e-10	40.7	0.0	3.4e-10	39.8	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
NAD_binding_9	PF13454.1	gi|297620485|ref|YP_003708622.1|	-	0.00072	19.3	0.1	1.3	8.8	0.0	2.5	2	1	0	2	2	2	2	FAD-NAD(P)-binding
DAO	PF01266.19	gi|297620485|ref|YP_003708622.1|	-	0.011	14.6	0.0	0.022	13.6	0.0	1.5	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
AAA_2	PF07724.9	gi|297620486|ref|YP_003708623.1|	-	2e-52	177.5	1.9	1.2e-50	171.7	0.0	3.1	3	0	0	3	3	3	1	AAA	domain	(Cdc48	subfamily)
Clp_N	PF02861.15	gi|297620486|ref|YP_003708623.1|	-	8.1e-35	118.5	5.5	4.4e-17	61.7	0.6	3.3	3	0	0	3	3	3	2	Clp	amino	terminal	domain
AAA	PF00004.24	gi|297620486|ref|YP_003708623.1|	-	4.6e-25	88.3	1.4	2.9e-12	46.9	0.1	3.0	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
ClpB_D2-small	PF10431.4	gi|297620486|ref|YP_003708623.1|	-	7.8e-24	83.3	2.0	1.2e-23	82.7	0.1	2.4	2	0	0	2	2	2	1	C-terminal,	D2-small	domain,	of	ClpB	protein
AAA_5	PF07728.9	gi|297620486|ref|YP_003708623.1|	-	2.5e-15	56.3	0.2	1.2e-10	41.2	0.0	3.1	2	1	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|297620486|ref|YP_003708623.1|	-	1.5e-09	38.1	6.3	0.0031	17.5	0.0	4.8	4	2	1	6	6	5	2	AAA	ATPase	domain
Sigma54_activat	PF00158.21	gi|297620486|ref|YP_003708623.1|	-	3.6e-09	36.3	0.0	1.2e-06	28.1	0.0	2.6	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_14	PF13173.1	gi|297620486|ref|YP_003708623.1|	-	6.9e-08	32.4	0.1	0.012	15.4	0.0	3.1	3	0	0	3	3	3	2	AAA	domain
AAA_22	PF13401.1	gi|297620486|ref|YP_003708623.1|	-	8e-08	32.4	4.1	0.0051	16.9	0.0	4.1	3	2	0	3	3	2	2	AAA	domain
UVR	PF02151.14	gi|297620486|ref|YP_003708623.1|	-	9.8e-07	28.0	4.9	3.4e-06	26.3	3.4	2.0	1	0	0	1	1	1	1	UvrB/uvrC	motif
AAA_23	PF13476.1	gi|297620486|ref|YP_003708623.1|	-	2.6e-06	27.8	1.7	0.1	12.9	0.0	3.3	2	2	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.12	gi|297620486|ref|YP_003708623.1|	-	3.6e-06	26.4	0.0	0.057	12.8	0.0	2.6	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
NACHT	PF05729.7	gi|297620486|ref|YP_003708623.1|	-	1.7e-05	24.5	0.1	0.032	13.8	0.0	2.9	2	1	0	2	2	2	2	NACHT	domain
AAA_25	PF13481.1	gi|297620486|ref|YP_003708623.1|	-	3.3e-05	23.3	0.2	0.29	10.5	0.0	3.5	3	1	0	3	3	3	2	AAA	domain
TniB	PF05621.6	gi|297620486|ref|YP_003708623.1|	-	8e-05	21.5	0.0	0.00032	19.5	0.0	1.9	1	1	0	1	1	1	1	Bacterial	TniB	protein
AAA_18	PF13238.1	gi|297620486|ref|YP_003708623.1|	-	0.0003	21.1	5.6	0.25	11.6	0.0	3.6	4	0	0	4	4	3	2	AAA	domain
Torsin	PF06309.6	gi|297620486|ref|YP_003708623.1|	-	0.0004	20.2	0.0	0.005	16.7	0.0	2.3	2	0	0	2	2	2	1	Torsin
AAA_17	PF13207.1	gi|297620486|ref|YP_003708623.1|	-	0.00048	20.9	5.8	0.052	14.3	0.4	4.3	3	1	0	3	3	3	1	AAA	domain
RNA_helicase	PF00910.17	gi|297620486|ref|YP_003708623.1|	-	0.001	19.1	0.1	1.9	8.7	0.0	3.0	3	0	0	3	3	2	1	RNA	helicase
AAA_19	PF13245.1	gi|297620486|ref|YP_003708623.1|	-	0.0014	18.3	0.1	1.5	8.6	0.0	2.8	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_10	PF12846.2	gi|297620486|ref|YP_003708623.1|	-	0.0024	17.3	0.2	0.49	9.7	0.0	2.8	2	1	1	3	3	3	1	AAA-like	domain
Mg_chelatase	PF01078.16	gi|297620486|ref|YP_003708623.1|	-	0.0028	16.8	0.7	1.5	7.9	0.4	3.4	2	1	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
DUF258	PF03193.11	gi|297620486|ref|YP_003708623.1|	-	0.0043	16.2	0.0	0.92	8.6	0.0	2.5	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
RuvB_N	PF05496.7	gi|297620486|ref|YP_003708623.1|	-	0.0046	16.0	4.7	0.13	11.3	0.0	4.3	5	0	0	5	5	5	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
PhoH	PF02562.11	gi|297620486|ref|YP_003708623.1|	-	0.015	14.5	0.0	2.2	7.4	0.0	3.0	3	0	0	3	3	3	0	PhoH-like	protein
ABC_tran	PF00005.22	gi|297620486|ref|YP_003708623.1|	-	0.018	15.3	2.7	1.1	9.5	0.0	3.3	3	1	0	3	3	3	0	ABC	transporter
ResIII	PF04851.10	gi|297620486|ref|YP_003708623.1|	-	0.02	14.7	0.0	4	7.2	0.0	3.8	2	1	0	3	3	3	0	Type	III	restriction	enzyme,	res	subunit
AAA_29	PF13555.1	gi|297620486|ref|YP_003708623.1|	-	0.023	14.2	0.0	1.4	8.5	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
UPF0079	PF02367.12	gi|297620486|ref|YP_003708623.1|	-	0.032	13.8	0.0	4.6	6.8	0.0	2.6	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
MobB	PF03205.9	gi|297620486|ref|YP_003708623.1|	-	0.033	13.9	0.0	6.4	6.4	0.0	2.6	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_3	PF07726.6	gi|297620486|ref|YP_003708623.1|	-	0.065	12.8	0.2	2.7	7.6	0.0	2.9	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.1	gi|297620486|ref|YP_003708623.1|	-	0.34	10.8	3.4	17	5.3	0.0	3.7	4	1	0	4	4	3	0	AAA	domain
DUF3638	PF12340.3	gi|297620488|ref|YP_003708625.1|	-	1.7e-12	46.8	0.2	6.9e-12	44.8	0.1	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3638)
TPR_2	PF07719.12	gi|297620488|ref|YP_003708625.1|	-	2.8	8.0	8.6	1.1	9.3	3.2	2.6	2	0	0	2	2	2	0	Tetratricopeptide	repeat
PTS_EIIA_2	PF00359.17	gi|297620489|ref|YP_003708626.1|	-	1e-22	80.4	0.1	1.3e-22	80.0	0.1	1.1	1	0	0	1	1	1	1	Phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	2
HTH_17	PF12728.2	gi|297620489|ref|YP_003708626.1|	-	3.1e-14	52.9	0.1	1.4e-13	50.8	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|297620489|ref|YP_003708626.1|	-	7.4e-06	25.0	0.0	0.0015	17.6	0.0	2.5	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	transposase	family	ISL3
MerR	PF00376.18	gi|297620489|ref|YP_003708626.1|	-	8.2e-06	25.2	0.0	1.5e-05	24.4	0.0	1.5	1	0	0	1	1	1	1	MerR	family	regulatory	protein
MerR_1	PF13411.1	gi|297620489|ref|YP_003708626.1|	-	2.4e-05	23.9	0.4	6.5e-05	22.6	0.0	2.0	2	0	0	2	2	2	1	MerR	HTH	family	regulatory	protein
HTH_23	PF13384.1	gi|297620489|ref|YP_003708626.1|	-	0.0001	21.8	0.0	0.00081	18.9	0.0	2.3	2	0	0	2	2	2	1	Homeodomain-like	domain
Phage_terminase	PF10668.4	gi|297620489|ref|YP_003708626.1|	-	0.00049	19.8	0.6	0.0033	17.1	0.1	2.5	2	1	0	2	2	2	1	Phage	terminase	small	subunit
HTH_DeoR	PF08220.7	gi|297620489|ref|YP_003708626.1|	-	0.00084	18.8	0.5	0.0028	17.1	0.0	2.0	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
HTH_3	PF01381.17	gi|297620489|ref|YP_003708626.1|	-	0.0012	18.6	0.0	0.018	14.8	0.0	2.5	3	0	0	3	3	3	1	Helix-turn-helix
Sigma70_r4_2	PF08281.7	gi|297620489|ref|YP_003708626.1|	-	0.004	16.5	0.0	0.012	15.1	0.0	1.8	1	0	0	1	1	1	1	Sigma-70,	region	4
LacI	PF00356.16	gi|297620489|ref|YP_003708626.1|	-	0.0065	16.0	0.0	0.023	14.3	0.0	1.9	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	lacI	family
HTH_38	PF13936.1	gi|297620489|ref|YP_003708626.1|	-	0.0075	15.7	0.0	0.4	10.2	0.0	3.2	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|297620489|ref|YP_003708626.1|	-	0.03	14.5	0.0	0.093	12.9	0.0	1.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|297620489|ref|YP_003708626.1|	-	0.042	13.8	0.0	0.17	11.8	0.0	2.0	2	1	1	3	3	3	0	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|297620489|ref|YP_003708626.1|	-	0.086	12.8	0.0	6	6.9	0.0	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|297620489|ref|YP_003708626.1|	-	0.096	12.8	0.0	0.43	10.7	0.0	2.0	1	1	0	2	2	2	0	Winged	helix-turn	helix
PTS_EIIA_2	PF00359.17	gi|297620490|ref|YP_003708627.1|	-	3.9e-35	120.6	0.0	4.5e-35	120.4	0.0	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	2
dUTPase	PF00692.14	gi|297620491|ref|YP_003708628.1|	-	6.2e-28	96.8	0.0	7e-28	96.6	0.0	1.0	1	0	0	1	1	1	1	dUTPase
Carboxyl_trans	PF01039.17	gi|297620492|ref|YP_003708629.1|	-	7e-22	77.4	0.9	1.9e-21	75.9	0.6	1.5	1	1	0	1	1	1	1	Carboxyl	transferase	domain
Tubulin	PF00091.20	gi|297620492|ref|YP_003708629.1|	-	0.052	13.3	0.0	0.082	12.7	0.0	1.3	1	0	0	1	1	1	0	Tubulin/FtsZ	family,	GTPase	domain
zinc_ribbon_5	PF13719.1	gi|297620492|ref|YP_003708629.1|	-	0.3	10.6	4.1	9.7	5.8	0.4	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF1451	PF07295.6	gi|297620492|ref|YP_003708629.1|	-	0.34	10.6	3.0	0.77	9.5	2.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1451)
Sod_Fe_C	PF02777.13	gi|297620493|ref|YP_003708630.1|	-	7.6e-44	147.8	0.4	1.4e-43	147.0	0.0	1.6	2	0	0	2	2	2	1	Iron/manganese	superoxide	dismutases,	C-terminal	domain
Sod_Fe_N	PF00081.17	gi|297620493|ref|YP_003708630.1|	-	3.4e-32	110.5	0.8	6.7e-32	109.5	0.5	1.5	1	0	0	1	1	1	1	Iron/manganese	superoxide	dismutases,	alpha-hairpin	domain
DUF3730	PF12530.3	gi|297620493|ref|YP_003708630.1|	-	0.11	12.3	0.1	0.35	10.7	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3730)
Porphobil_deam	PF01379.15	gi|297620494|ref|YP_003708631.1|	-	5.3e-49	166.0	0.0	6.7e-49	165.7	0.0	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
HEM4	PF02602.10	gi|297620494|ref|YP_003708631.1|	-	1.1e-30	106.6	0.0	2.7e-30	105.3	0.0	1.6	2	0	0	2	2	2	1	Uroporphyrinogen-III	synthase	HemD
TrkA_C	PF02080.16	gi|297620494|ref|YP_003708631.1|	-	0.065	12.8	0.2	0.48	10.0	0.0	2.6	2	1	0	2	2	2	0	TrkA-C	domain
GTSE1_N	PF15259.1	gi|297620494|ref|YP_003708631.1|	-	0.11	12.4	0.0	1.3	8.9	0.0	2.4	3	0	0	3	3	3	0	G-2	and	S-phase	expressed	1
AAA_25	PF13481.1	gi|297620495|ref|YP_003708632.1|	-	2.9e-26	92.0	0.0	5.3e-26	91.2	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|297620495|ref|YP_003708632.1|	-	5e-18	65.0	0.4	8.3e-11	41.4	0.1	2.2	1	1	0	2	2	2	2	KaiC
ChlI	PF13541.1	gi|297620495|ref|YP_003708632.1|	-	3e-08	33.1	0.0	5e-08	32.4	0.0	1.4	1	0	0	1	1	1	1	Subunit	ChlI	of	Mg-chelatase
Lon_C	PF05362.8	gi|297620495|ref|YP_003708632.1|	-	8.8e-07	28.4	0.3	1.8e-06	27.3	0.2	1.5	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
AAA_22	PF13401.1	gi|297620495|ref|YP_003708632.1|	-	2e-05	24.7	0.0	3.9e-05	23.8	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
CbiA	PF01656.18	gi|297620495|ref|YP_003708632.1|	-	8.3e-05	22.0	0.5	0.0096	15.3	0.1	2.3	2	0	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Rad51	PF08423.6	gi|297620495|ref|YP_003708632.1|	-	8.5e-05	21.5	0.1	0.0036	16.2	0.1	2.6	1	1	0	1	1	1	1	Rad51
DnaB_C	PF03796.10	gi|297620495|ref|YP_003708632.1|	-	0.00016	20.6	0.0	0.00056	18.8	0.0	1.9	2	0	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
AAA_31	PF13614.1	gi|297620495|ref|YP_003708632.1|	-	0.00047	20.1	0.0	0.00085	19.2	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|297620495|ref|YP_003708632.1|	-	0.0012	18.5	0.0	0.0023	17.6	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
IstB_IS21	PF01695.12	gi|297620495|ref|YP_003708632.1|	-	0.0013	18.1	0.0	0.0024	17.2	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_30	PF13604.1	gi|297620495|ref|YP_003708632.1|	-	0.0015	18.1	0.0	0.0039	16.8	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
KTI12	PF08433.5	gi|297620495|ref|YP_003708632.1|	-	0.0021	17.3	0.0	0.0031	16.7	0.0	1.2	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_16	PF13191.1	gi|297620495|ref|YP_003708632.1|	-	0.0024	17.8	0.0	0.0041	17.1	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
NTPase_1	PF03266.10	gi|297620495|ref|YP_003708632.1|	-	0.0024	17.5	0.1	0.0068	16.1	0.1	1.7	1	1	0	1	1	1	1	NTPase
RecA	PF00154.16	gi|297620495|ref|YP_003708632.1|	-	0.0037	16.3	0.1	0.017	14.2	0.0	1.8	2	0	0	2	2	2	1	recA	bacterial	DNA	recombination	protein
AAA_10	PF12846.2	gi|297620495|ref|YP_003708632.1|	-	0.0039	16.6	0.0	0.0058	16.1	0.0	1.2	1	0	0	1	1	1	1	AAA-like	domain
ABC_tran	PF00005.22	gi|297620495|ref|YP_003708632.1|	-	0.0055	17.0	0.1	0.011	16.0	0.1	1.5	1	0	0	1	1	1	1	ABC	transporter
ArgK	PF03308.11	gi|297620495|ref|YP_003708632.1|	-	0.0058	15.4	0.1	0.018	13.8	0.0	1.7	2	0	0	2	2	2	1	ArgK	protein
NACHT	PF05729.7	gi|297620495|ref|YP_003708632.1|	-	0.013	15.1	0.1	0.023	14.3	0.1	1.4	1	0	0	1	1	1	0	NACHT	domain
Arch_ATPase	PF01637.13	gi|297620495|ref|YP_003708632.1|	-	0.015	14.9	0.0	0.025	14.3	0.0	1.3	1	0	0	1	1	1	0	Archaeal	ATPase
MobB	PF03205.9	gi|297620495|ref|YP_003708632.1|	-	0.03	14.0	0.0	2	8.1	0.0	2.4	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_19	PF13245.1	gi|297620495|ref|YP_003708632.1|	-	0.031	14.0	0.1	0.07	12.8	0.1	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA	PF00004.24	gi|297620495|ref|YP_003708632.1|	-	0.064	13.4	0.0	0.12	12.5	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|297620495|ref|YP_003708632.1|	-	0.065	13.1	0.0	0.18	11.7	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|297620495|ref|YP_003708632.1|	-	0.073	13.2	0.0	0.14	12.3	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
DUF815	PF05673.8	gi|297620495|ref|YP_003708632.1|	-	0.075	11.9	0.1	0.15	10.9	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
AAA_26	PF13500.1	gi|297620495|ref|YP_003708632.1|	-	0.079	12.5	0.1	0.17	11.4	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
DUF2075	PF09848.4	gi|297620495|ref|YP_003708632.1|	-	0.097	11.6	0.0	0.13	11.1	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
ATP-synt_ab	PF00006.20	gi|297620495|ref|YP_003708632.1|	-	0.11	11.9	0.0	0.13	11.6	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
zinc_ribbon_6	PF14599.1	gi|297620495|ref|YP_003708632.1|	-	0.38	10.5	1.7	0.7	9.7	1.2	1.4	1	0	0	1	1	1	0	Zinc-ribbon
Ribonucleas_3_3	PF14622.1	gi|297620496|ref|YP_003708633.1|	-	4.2e-35	120.5	0.1	8.3e-35	119.5	0.0	1.5	2	0	0	2	2	2	1	Ribonuclease-III-like
Ribonuclease_3	PF00636.21	gi|297620496|ref|YP_003708633.1|	-	1.5e-21	76.9	0.1	4.5e-21	75.4	0.0	1.9	2	0	0	2	2	2	1	Ribonuclease	III	domain
dsrm	PF00035.20	gi|297620496|ref|YP_003708633.1|	-	3.9e-19	68.9	0.1	6.5e-19	68.2	0.1	1.4	1	0	0	1	1	1	1	Double-stranded	RNA	binding	motif
DND1_DSRM	PF14709.1	gi|297620496|ref|YP_003708633.1|	-	8.5e-09	35.5	0.1	1.8e-08	34.5	0.0	1.6	1	0	0	1	1	1	1	double	strand	RNA	binding	domain	from	DEAD	END	PROTEIN	1
FixH	PF05751.6	gi|297620498|ref|YP_003708635.1|	-	0.098	12.4	0.0	0.2	11.4	0.0	1.4	1	0	0	1	1	1	0	FixH
Peptidase_C14	PF00656.17	gi|297620500|ref|YP_003708637.1|	-	3.7e-11	43.1	0.0	6.2e-11	42.4	0.0	1.3	1	1	0	1	1	1	1	Caspase	domain
IL4Ra_N	PF09238.5	gi|297620501|ref|YP_003708638.1|	-	0.093	12.8	0.1	0.21	11.7	0.1	1.5	1	0	0	1	1	1	0	Interleukin-4	receptor	alpha	chain,	N-terminal
DSX_dimer	PF08828.5	gi|297620502|ref|YP_003708639.1|	-	0.048	13.1	0.0	0.17	11.4	0.0	1.9	1	0	0	1	1	1	0	Doublesex	dimerisation	domain
DHDPS	PF00701.17	gi|297620502|ref|YP_003708639.1|	-	0.097	11.2	0.2	3.9	5.9	0.0	2.5	2	1	1	3	3	3	0	Dihydrodipicolinate	synthetase	family
DUF3677	PF12432.3	gi|297620502|ref|YP_003708639.1|	-	0.45	10.9	3.1	4.6	7.7	0.1	3.2	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3677)
Telomere_Sde2_2	PF13297.1	gi|297620505|ref|YP_003708642.1|	-	0.067	12.4	0.0	0.19	11.0	0.0	1.7	1	0	0	1	1	1	0	Telomere	stability	C-terminal
DUF1083	PF06452.6	gi|297620506|ref|YP_003708643.1|	-	6e-08	32.7	0.0	1.2e-07	31.7	0.0	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1083)
GCV_T	PF01571.16	gi|297620507|ref|YP_003708644.1|	-	3.5e-65	219.3	0.0	4.4e-64	215.7	0.0	2.0	2	0	0	2	2	2	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.6	gi|297620507|ref|YP_003708644.1|	-	9.9e-21	73.5	0.2	1.8e-20	72.7	0.2	1.5	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
GCV_H	PF01597.14	gi|297620508|ref|YP_003708645.1|	-	4.1e-46	155.6	1.3	4.4e-46	155.5	0.9	1.0	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|297620508|ref|YP_003708645.1|	-	2.6e-07	30.1	0.3	5e-07	29.2	0.2	1.5	1	0	0	1	1	1	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|297620508|ref|YP_003708645.1|	-	4e-05	23.2	0.0	6.1e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
Biotin_lipoyl_2	PF13533.1	gi|297620508|ref|YP_003708645.1|	-	0.0018	17.8	0.2	0.23	11.1	0.0	2.4	1	1	1	2	2	2	2	Biotin-lipoyl	like
DUF2118	PF09891.4	gi|297620508|ref|YP_003708645.1|	-	0.017	14.7	0.0	0.026	14.2	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
Peptidase_M23	PF01551.17	gi|297620508|ref|YP_003708645.1|	-	0.09	12.8	0.2	16	5.6	0.0	2.7	1	1	2	3	3	3	0	Peptidase	family	M23
GDC-P	PF02347.11	gi|297620509|ref|YP_003708646.1|	-	6.3e-126	420.5	0.0	7e-126	420.3	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|297620509|ref|YP_003708646.1|	-	3.3e-07	29.3	0.0	1.6e-06	27.1	0.0	1.9	1	1	1	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|297620509|ref|YP_003708646.1|	-	0.015	13.6	0.0	0.025	12.8	0.0	1.3	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
Ubie_methyltran	PF01209.13	gi|297620509|ref|YP_003708646.1|	-	0.14	11.2	0.0	0.21	10.6	0.0	1.2	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
PhoD	PF09423.5	gi|297620509|ref|YP_003708646.1|	-	0.18	10.3	0.0	0.25	9.8	0.0	1.1	1	0	0	1	1	1	0	PhoD-like	phosphatase
GDC-P	PF02347.11	gi|297620510|ref|YP_003708647.1|	-	2.2e-11	43.1	0.0	1.2e-07	30.8	0.0	2.1	2	0	0	2	2	2	2	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|297620510|ref|YP_003708647.1|	-	3.3e-08	32.6	0.0	4.8e-08	32.1	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|297620510|ref|YP_003708647.1|	-	1.2e-06	27.9	0.0	3.2e-06	26.4	0.0	1.7	1	1	0	1	1	1	1	Beta-eliminating	lyase
Pyridoxal_deC	PF00282.14	gi|297620510|ref|YP_003708647.1|	-	0.063	11.7	0.0	1.4	7.2	0.0	2.1	2	0	0	2	2	2	0	Pyridoxal-dependent	decarboxylase	conserved	domain
Rnf-Nqr	PF02508.9	gi|297620511|ref|YP_003708648.1|	-	3.7e-61	206.0	19.8	4.6e-61	205.7	13.8	1.0	1	0	0	1	1	1	1	Rnf-Nqr	subunit,	membrane	protein
CTV_P6	PF06706.6	gi|297620511|ref|YP_003708648.1|	-	0.11	12.0	2.8	0.62	9.5	2.0	2.3	1	0	0	1	1	1	0	Citrus	tristeza	virus	6-kDa	protein
Rnf-Nqr	PF02508.9	gi|297620512|ref|YP_003708649.1|	-	1.8e-51	174.4	9.8	2e-51	174.2	6.8	1.0	1	0	0	1	1	1	1	Rnf-Nqr	subunit,	membrane	protein
DUF21	PF01595.15	gi|297620512|ref|YP_003708649.1|	-	0.017	14.3	5.1	0.034	13.4	3.6	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF21
DUF624	PF04854.9	gi|297620512|ref|YP_003708649.1|	-	0.12	12.2	4.2	0.2	11.5	0.0	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function,	DUF624
Potyvirid-P3	PF13608.1	gi|297620512|ref|YP_003708649.1|	-	0.36	9.8	2.0	0.5	9.4	1.4	1.1	1	0	0	1	1	1	0	Protein	P3	of	Potyviral	polyprotein
FMN_bind	PF04205.9	gi|297620513|ref|YP_003708650.1|	-	7.8e-17	61.2	0.4	1.4e-16	60.4	0.1	1.6	2	0	0	2	2	2	1	FMN-binding	domain
DUF1443	PF07280.6	gi|297620513|ref|YP_003708650.1|	-	4.4	6.9	5.1	19	4.9	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1443)
NQR2_RnfD_RnfE	PF03116.10	gi|297620514|ref|YP_003708651.1|	-	1.4e-103	346.4	14.2	3.1e-56	190.8	0.5	2.0	1	1	0	2	2	2	2	NQR2,	RnfD,	RnfE	family
YabP	PF07873.6	gi|297620515|ref|YP_003708652.1|	-	0.013	14.9	1.3	17	5.0	0.0	4.5	5	0	0	5	5	5	0	YabP	family
Melibiase	PF02065.13	gi|297620515|ref|YP_003708652.1|	-	0.069	11.8	0.0	1.4	7.5	0.0	2.6	3	0	0	3	3	3	0	Melibiase
DUF3768	PF12599.3	gi|297620515|ref|YP_003708652.1|	-	0.12	12.3	0.0	0.44	10.4	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3768)
TAF8_C	PF10406.4	gi|297620516|ref|YP_003708653.1|	-	0.43	10.6	3.1	2.8	8.0	0.1	2.7	2	0	0	2	2	2	0	Transcription	factor	TFIID	complex	subunit	8	C-term
DUF308	PF03729.8	gi|297620517|ref|YP_003708654.1|	-	1.2e-20	73.2	38.2	2.9e-10	39.9	9.3	3.1	1	1	2	3	3	3	3	Short	repeat	of	unknown	function	(DUF308)
Pribosyltran	PF00156.22	gi|297620518|ref|YP_003708655.1|	-	9.6e-07	28.5	0.0	1.3e-06	28.1	0.0	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
DZR	PF12773.2	gi|297620518|ref|YP_003708655.1|	-	0.00062	19.5	8.7	0.0011	18.6	6.1	1.5	1	0	0	1	1	1	1	Double	zinc	ribbon
Pribosyl_synth	PF14572.1	gi|297620518|ref|YP_003708655.1|	-	0.12	12.0	0.0	0.16	11.6	0.0	1.1	1	0	0	1	1	1	0	Phosphoribosyl	synthetase-associated	domain
Ribosomal_S14	PF00253.16	gi|297620518|ref|YP_003708655.1|	-	0.16	11.3	2.0	0.28	10.5	1.4	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S14p/S29e
zinc-ribbons_6	PF07191.7	gi|297620518|ref|YP_003708655.1|	-	3.7	7.4	9.4	0.61	9.9	2.5	2.1	1	1	1	2	2	2	0	zinc-ribbons
HypA	PF01155.14	gi|297620518|ref|YP_003708655.1|	-	8.7	6.0	8.2	42	3.8	5.6	1.9	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
PIG-L	PF02585.12	gi|297620519|ref|YP_003708656.1|	-	3.2e-21	76.1	0.0	4.7e-21	75.6	0.0	1.3	1	0	0	1	1	1	1	GlcNAc-PI	de-N-acetylase
Glycos_transf_1	PF00534.15	gi|297620520|ref|YP_003708657.1|	-	1.9e-34	118.5	0.0	2.7e-34	118.0	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|297620520|ref|YP_003708657.1|	-	8.7e-19	67.9	0.2	2.2e-18	66.5	0.1	1.7	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.1	gi|297620520|ref|YP_003708657.1|	-	3.9e-17	62.3	0.5	8.3e-17	61.3	0.4	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_trans_1_4	PF13692.1	gi|297620520|ref|YP_003708657.1|	-	3.9e-15	56.1	0.0	7.3e-15	55.3	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|297620520|ref|YP_003708657.1|	-	4e-14	53.0	0.0	1.4e-13	51.3	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.1	gi|297620520|ref|YP_003708657.1|	-	1.6e-07	31.4	0.0	4.3e-07	30.1	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_5	PF08323.6	gi|297620520|ref|YP_003708657.1|	-	0.00018	21.0	2.1	0.65	9.4	0.3	3.0	1	1	1	2	2	2	2	Starch	synthase	catalytic	domain
Bac_DnaA	PF00308.13	gi|297620521|ref|YP_003708658.1|	-	1.6e-78	263.2	1.2	1.8e-78	263.2	0.2	1.5	2	0	0	2	2	2	1	Bacterial	dnaA	protein
Bac_DnaA_C	PF08299.6	gi|297620521|ref|YP_003708658.1|	-	2.7e-18	65.5	0.1	5.5e-18	64.5	0.1	1.5	1	0	0	1	1	1	1	Bacterial	dnaA	protein	helix-turn-helix
DnaA_N	PF11638.3	gi|297620521|ref|YP_003708658.1|	-	8.2e-11	41.3	0.1	2.7e-10	39.6	0.1	1.9	1	0	0	1	1	1	1	DnaA	N-terminal	domain
IstB_IS21	PF01695.12	gi|297620521|ref|YP_003708658.1|	-	1.5e-07	31.0	0.0	3e-07	30.0	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AFG1_ATPase	PF03969.11	gi|297620521|ref|YP_003708658.1|	-	5.8e-05	22.0	0.1	0.00016	20.6	0.0	1.7	2	0	0	2	2	2	1	AFG1-like	ATPase
Arch_ATPase	PF01637.13	gi|297620521|ref|YP_003708658.1|	-	0.0015	18.2	0.0	0.0035	17.0	0.0	1.5	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_22	PF13401.1	gi|297620521|ref|YP_003708658.1|	-	0.0029	17.7	2.3	0.082	13.0	1.6	2.8	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|297620521|ref|YP_003708658.1|	-	0.005	16.5	0.0	0.013	15.2	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA	PF00004.24	gi|297620521|ref|YP_003708658.1|	-	0.011	15.8	0.0	0.027	14.6	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|297620521|ref|YP_003708658.1|	-	0.017	15.0	0.0	0.064	13.2	0.0	1.9	1	1	0	1	1	1	0	AAA	ATPase	domain
NTPase_1	PF03266.10	gi|297620521|ref|YP_003708658.1|	-	0.033	13.9	0.5	6	6.5	0.0	2.5	1	1	1	2	2	2	0	NTPase
SBP_bac_3	PF00497.15	gi|297620522|ref|YP_003708659.1|	-	1.2e-28	99.9	0.0	1.8e-28	99.3	0.0	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
Lig_chan-Glu_bd	PF10613.4	gi|297620522|ref|YP_003708659.1|	-	0.0011	18.9	0.2	0.0052	16.7	0.0	1.9	2	0	0	2	2	2	1	Ligated	ion	channel	L-glutamate-	and	glycine-binding	site
NMT1	PF09084.6	gi|297620522|ref|YP_003708659.1|	-	0.0036	16.9	0.0	0.35	10.4	0.0	2.2	2	0	0	2	2	2	2	NMT1/THI5	like
Phosphonate-bd	PF12974.2	gi|297620522|ref|YP_003708659.1|	-	0.053	12.9	0.0	0.14	11.5	0.0	1.6	2	0	0	2	2	2	0	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
Phage_G	PF02306.10	gi|297620523|ref|YP_003708660.1|	-	0.07	12.7	0.1	0.071	12.7	0.0	1.0	1	0	0	1	1	1	0	Major	spike	protein	(G	protein)
Tetraspannin	PF00335.15	gi|297620523|ref|YP_003708660.1|	-	0.11	11.8	1.6	0.098	11.9	1.1	1.0	1	0	0	1	1	1	0	Tetraspanin	family
CTV_P6	PF06706.6	gi|297620523|ref|YP_003708660.1|	-	0.57	9.7	4.2	0.77	9.2	2.9	1.2	1	0	0	1	1	1	0	Citrus	tristeza	virus	6-kDa	protein
DsbD_2	PF13386.1	gi|297620524|ref|YP_003708661.1|	-	1.7e-24	86.6	24.3	2.3e-24	86.2	16.8	1.1	1	0	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
DIOX_N	PF14226.1	gi|297620525|ref|YP_003708662.1|	-	2.8e-05	24.6	0.0	4.8e-05	23.8	0.0	1.3	1	0	0	1	1	1	1	non-haem	dioxygenase	in	morphine	synthesis	N-terminal
2OG-FeII_Oxy	PF03171.15	gi|297620525|ref|YP_003708662.1|	-	0.00019	21.6	0.0	0.00033	20.8	0.0	1.4	1	0	0	1	1	1	1	2OG-Fe(II)	oxygenase	superfamily
AhpC-TSA	PF00578.16	gi|297620526|ref|YP_003708663.1|	-	4.3e-40	136.2	0.0	5.1e-40	135.9	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|297620526|ref|YP_003708663.1|	-	2.1e-21	76.0	0.0	2.3e-21	75.8	0.0	1.0	1	0	0	1	1	1	1	Redoxin
Thioredoxin_8	PF13905.1	gi|297620526|ref|YP_003708663.1|	-	0.0042	17.1	0.0	0.0059	16.6	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin-like
SCO1-SenC	PF02630.9	gi|297620526|ref|YP_003708663.1|	-	0.005	16.4	0.0	0.3	10.6	0.0	2.1	2	0	0	2	2	2	1	SCO1/SenC
AhpC-TSA_2	PF13911.1	gi|297620526|ref|YP_003708663.1|	-	0.011	15.5	0.0	0.021	14.7	0.0	1.5	1	1	0	1	1	1	0	AhpC/TSA	antioxidant	enzyme
GSHPx	PF00255.14	gi|297620526|ref|YP_003708663.1|	-	0.015	14.6	0.0	0.024	14.0	0.0	1.3	1	0	0	1	1	1	0	Glutathione	peroxidase
DinI	PF06183.8	gi|297620526|ref|YP_003708663.1|	-	0.12	12.4	0.0	0.67	10.0	0.0	2.1	2	0	0	2	2	2	0	DinI-like	family
SBP_bac_5	PF00496.17	gi|297620528|ref|YP_003708665.1|	-	3.1e-43	148.0	0.1	4.6e-43	147.4	0.1	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
BPD_transp_1	PF00528.17	gi|297620529|ref|YP_003708666.1|	-	1.2e-28	99.8	5.8	1.2e-28	99.8	4.0	2.1	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
MgtE	PF01769.11	gi|297620529|ref|YP_003708666.1|	-	0.32	11.2	5.5	0.5	10.6	0.3	2.7	2	1	0	2	2	2	0	Divalent	cation	transporter
DDE_3	PF13358.1	gi|297620530|ref|YP_003708667.1|	-	7.9e-29	100.2	0.0	1.3e-28	99.6	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.1	gi|297620530|ref|YP_003708667.1|	-	7.4e-19	67.0	0.1	1.9e-18	65.7	0.1	1.7	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_29	PF13551.1	gi|297620530|ref|YP_003708667.1|	-	9.3e-10	38.6	0.0	2.4e-09	37.3	0.0	1.7	2	0	0	2	2	1	1	Winged	helix-turn	helix
rve	PF00665.21	gi|297620530|ref|YP_003708667.1|	-	3.7e-09	36.7	0.0	5.6e-08	32.9	0.0	2.3	2	0	0	2	2	2	1	Integrase	core	domain
HTH_23	PF13384.1	gi|297620530|ref|YP_003708667.1|	-	7.2e-07	28.6	0.0	2e-06	27.2	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|297620530|ref|YP_003708667.1|	-	2.2e-05	24.3	0.1	8.5e-05	22.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|297620530|ref|YP_003708667.1|	-	0.0003	20.1	0.0	0.00064	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
DDE_Tnp_ISAZ013	PF07592.6	gi|297620530|ref|YP_003708667.1|	-	0.0024	16.6	0.2	0.11	11.2	0.1	2.2	2	0	0	2	2	2	1	Rhodopirellula	transposase	DDE	domain
Terminase_5	PF06056.7	gi|297620530|ref|YP_003708667.1|	-	0.0027	17.2	0.0	0.0054	16.2	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
rve_3	PF13683.1	gi|297620530|ref|YP_003708667.1|	-	0.0038	16.7	0.0	0.013	14.9	0.0	1.9	2	0	0	2	2	1	1	Integrase	core	domain
Sigma70_r4	PF04545.11	gi|297620530|ref|YP_003708667.1|	-	0.012	14.9	0.0	0.034	13.4	0.0	1.8	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_40	PF14493.1	gi|297620530|ref|YP_003708667.1|	-	0.015	15.5	0.0	0.039	14.1	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_32	PF13565.1	gi|297620530|ref|YP_003708667.1|	-	0.032	15.0	1.9	5	7.9	0.0	3.5	2	1	2	4	4	3	0	Homeodomain-like	domain
HTH_38	PF13936.1	gi|297620530|ref|YP_003708667.1|	-	0.048	13.2	0.2	0.88	9.1	0.1	2.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|297620530|ref|YP_003708667.1|	-	0.065	12.8	0.0	0.16	11.6	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
GerE	PF00196.14	gi|297620530|ref|YP_003708667.1|	-	0.081	12.2	0.1	0.3	10.4	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.1	gi|297620530|ref|YP_003708667.1|	-	1.8	8.9	6.1	6	7.2	0.2	3.3	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
BPD_transp_1	PF00528.17	gi|297620531|ref|YP_003708668.1|	-	1.7e-31	109.2	4.3	1.7e-31	109.2	3.0	2.8	3	0	0	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|297620531|ref|YP_003708668.1|	-	3.3e-07	29.5	0.1	3.3e-07	29.5	0.1	3.4	4	0	0	4	4	4	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
CARDB	PF07705.6	gi|297620533|ref|YP_003708670.1|	-	0.02	14.9	0.0	0.037	14.0	0.0	1.4	1	1	0	1	1	1	0	CARDB
AAA_14	PF13173.1	gi|297620533|ref|YP_003708670.1|	-	0.082	12.8	0.0	0.11	12.4	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
PHO4	PF01384.15	gi|297620534|ref|YP_003708671.1|	-	9.3e-119	395.8	29.8	7.8e-118	392.8	20.7	1.9	1	1	0	1	1	1	1	Phosphate	transporter	family
RseC_MucC	PF04246.7	gi|297620534|ref|YP_003708671.1|	-	0.0054	16.3	0.4	0.0054	16.3	0.3	3.5	4	0	0	4	4	4	1	Positive	regulator	of	sigma(E),	RseC/MucC
HTH_IclR	PF09339.5	gi|297620534|ref|YP_003708671.1|	-	0.011	15.3	1.1	2.1	7.9	0.0	2.7	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
ASL_C2	PF14698.1	gi|297620534|ref|YP_003708671.1|	-	0.059	13.4	0.1	17	5.5	0.0	2.8	2	0	0	2	2	2	0	Argininosuccinate	lyase	C-terminal
DUF1418	PF07214.7	gi|297620534|ref|YP_003708671.1|	-	1.4	8.5	8.6	0.67	9.6	0.6	2.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1418)
PhoU_div	PF01865.11	gi|297620535|ref|YP_003708672.1|	-	9.3e-56	188.3	7.7	1.2e-55	188.0	5.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
PhoU	PF01895.14	gi|297620535|ref|YP_003708672.1|	-	9.2e-05	22.8	6.0	0.12	12.8	1.2	2.4	1	1	0	2	2	2	2	PhoU	domain
Imm35	PF15581.1	gi|297620535|ref|YP_003708672.1|	-	0.00014	21.8	0.9	0.00053	19.9	0.1	2.1	2	0	0	2	2	2	1	Immunity	protein	35
ATP-cone	PF03477.11	gi|297620535|ref|YP_003708672.1|	-	0.007	16.7	3.1	0.37	11.2	0.4	2.6	2	1	0	2	2	2	1	ATP	cone	domain
APG5	PF04106.7	gi|297620535|ref|YP_003708672.1|	-	0.0098	15.3	0.4	0.015	14.7	0.3	1.4	1	1	0	1	1	1	1	Autophagy	protein	Apg5
YmgB	PF10798.3	gi|297620535|ref|YP_003708672.1|	-	0.1	12.3	0.7	0.96	9.3	0.0	2.8	2	1	1	3	3	3	0	Biofilm	development	protein	YmgB/AriR
DUF1065	PF06358.6	gi|297620535|ref|YP_003708672.1|	-	0.15	11.8	0.0	1.1	9.0	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1065)
Dpoe2NT	PF12213.3	gi|297620535|ref|YP_003708672.1|	-	0.17	11.8	2.9	0.43	10.5	0.1	2.6	2	1	1	3	3	3	0	DNA	polymerases	epsilon	N	terminal
Sod_Ni	PF09055.6	gi|297620535|ref|YP_003708672.1|	-	0.22	11.9	3.7	2.4	8.5	0.1	2.4	2	1	0	2	2	2	0	Nickel-containing	superoxide	dismutase
MecA_N	PF05223.6	gi|297620535|ref|YP_003708672.1|	-	0.28	11.2	1.9	6.3	6.8	0.2	2.5	2	1	0	2	2	2	0	NTF2-like	N-terminal	transpeptidase	domain
tRNA-synt_His	PF13393.1	gi|297620535|ref|YP_003708672.1|	-	0.5	9.3	6.6	2.7	6.9	0.6	2.3	1	1	0	2	2	2	0	Histidyl-tRNA	synthetase
FlgN	PF05130.7	gi|297620535|ref|YP_003708672.1|	-	4.9	7.3	9.9	1.2	9.4	1.5	2.4	1	1	1	2	2	2	0	FlgN	protein
ABC_tran	PF00005.22	gi|297620536|ref|YP_003708673.1|	-	1e-30	106.7	0.0	1.7e-30	106.1	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|297620536|ref|YP_003708673.1|	-	3.1e-16	59.4	0.1	5.6e-16	58.6	0.1	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|297620536|ref|YP_003708673.1|	-	1.3e-08	35.1	0.0	2.7e-07	30.8	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|297620536|ref|YP_003708673.1|	-	1.9e-07	30.5	0.0	3.5e-07	29.6	0.0	1.4	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|297620536|ref|YP_003708673.1|	-	0.001	19.2	1.1	0.016	15.3	0.7	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|297620536|ref|YP_003708673.1|	-	0.0075	15.6	0.1	0.44	9.9	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|297620536|ref|YP_003708673.1|	-	0.0091	15.5	0.1	0.017	14.6	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|297620536|ref|YP_003708673.1|	-	0.015	15.3	0.1	0.024	14.6	0.1	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_15	PF13175.1	gi|297620536|ref|YP_003708673.1|	-	0.037	13.0	0.0	0.34	9.9	0.0	2.0	2	0	0	2	2	2	0	AAA	ATPase	domain
DUF87	PF01935.12	gi|297620536|ref|YP_003708673.1|	-	0.059	13.1	0.1	0.14	11.9	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
ABC_ATPase	PF09818.4	gi|297620536|ref|YP_003708673.1|	-	0.06	11.9	1.5	0.19	10.2	1.0	1.7	1	1	0	1	1	1	0	Predicted	ATPase	of	the	ABC	class
Mg_chelatase	PF01078.16	gi|297620536|ref|YP_003708673.1|	-	0.061	12.4	0.1	0.59	9.2	0.1	2.0	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
NB-ARC	PF00931.17	gi|297620536|ref|YP_003708673.1|	-	0.097	11.5	0.2	11	4.7	0.0	2.1	2	0	0	2	2	2	0	NB-ARC	domain
FtsK_SpoIIIE	PF01580.13	gi|297620536|ref|YP_003708673.1|	-	0.1	12.0	0.1	0.19	11.1	0.1	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
DUF2075	PF09848.4	gi|297620536|ref|YP_003708673.1|	-	0.17	10.8	0.0	0.21	10.5	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_10	PF12846.2	gi|297620536|ref|YP_003708673.1|	-	0.17	11.2	1.8	0.68	9.3	0.2	2.2	2	1	0	2	2	2	0	AAA-like	domain
ABC_tran	PF00005.22	gi|297620537|ref|YP_003708674.1|	-	8.9e-31	107.0	0.0	1.2e-30	106.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_22	PF13401.1	gi|297620537|ref|YP_003708674.1|	-	5.8e-06	26.4	0.0	1.5e-05	25.1	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_21	PF13304.1	gi|297620537|ref|YP_003708674.1|	-	3.2e-05	24.0	0.6	0.0088	16.0	0.0	2.2	1	1	0	2	2	2	2	AAA	domain
oligo_HPY	PF08352.7	gi|297620537|ref|YP_003708674.1|	-	5.7e-05	23.3	0.0	9.5e-05	22.6	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_29	PF13555.1	gi|297620537|ref|YP_003708674.1|	-	0.00029	20.2	0.0	0.00052	19.4	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|297620537|ref|YP_003708674.1|	-	0.0018	17.5	0.2	0.0051	16.0	0.2	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.1	gi|297620537|ref|YP_003708674.1|	-	0.0027	17.7	0.4	0.0068	16.4	0.3	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|297620537|ref|YP_003708674.1|	-	0.01	15.2	0.0	1.6	8.1	0.0	2.1	2	0	0	2	2	2	0	AAA-like	domain
Sigma54_activat	PF00158.21	gi|297620537|ref|YP_003708674.1|	-	0.016	14.6	0.0	2.9	7.3	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_18	PF13238.1	gi|297620537|ref|YP_003708674.1|	-	0.072	13.3	0.0	0.16	12.2	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|297620537|ref|YP_003708674.1|	-	0.22	12.3	0.9	0.45	11.3	0.2	2.0	2	1	0	2	2	2	0	AAA	domain
MFS_1	PF07690.11	gi|297620538|ref|YP_003708675.1|	-	1.8e-16	59.8	49.0	1.6e-14	53.3	27.0	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
YqzM	PF14141.1	gi|297620538|ref|YP_003708675.1|	-	0.45	10.3	4.9	0.18	11.6	0.9	2.3	2	0	0	2	2	2	0	YqzM-like	protein
FIVAR	PF07554.8	gi|297620539|ref|YP_003708676.1|	-	0.067	13.4	0.3	0.36	11.1	0.2	2.3	2	0	0	2	2	2	0	Uncharacterised	Sugar-binding	Domain
PseudoU_synth_2	PF00849.17	gi|297620540|ref|YP_003708677.1|	-	8.7e-16	58.1	0.0	1.3e-14	54.3	0.0	2.1	1	1	0	1	1	1	1	RNA	pseudouridylate	synthase
S4	PF01479.20	gi|297620540|ref|YP_003708677.1|	-	6.4e-09	35.1	0.4	2.6e-08	33.1	0.0	2.2	1	1	1	2	2	2	1	S4	domain
TruB_N	PF01509.13	gi|297620540|ref|YP_003708677.1|	-	0.088	12.9	0.1	0.16	12.1	0.0	1.4	1	0	0	1	1	1	0	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
His_Phos_1	PF00300.17	gi|297620541|ref|YP_003708678.1|	-	3.2e-39	134.5	0.0	4.2e-39	134.1	0.0	1.1	1	0	0	1	1	1	1	Histidine	phosphatase	superfamily	(branch	1)
Aminotran_5	PF00266.14	gi|297620542|ref|YP_003708679.1|	-	5.2e-45	153.7	0.0	6.3e-45	153.5	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|297620542|ref|YP_003708679.1|	-	0.012	14.7	0.1	0.025	13.7	0.0	1.7	1	1	0	1	1	1	0	Beta-eliminating	lyase
NifU	PF01106.12	gi|297620543|ref|YP_003708680.1|	-	9.5e-15	54.1	0.0	1.6e-14	53.4	0.0	1.4	1	0	0	1	1	1	1	NifU-like	domain
NifU_N	PF01592.11	gi|297620543|ref|YP_003708680.1|	-	1.7e-14	53.8	0.0	2.8e-14	53.1	0.0	1.3	1	0	0	1	1	1	1	NifU-like	N	terminal	domain
Thioredoxin	PF00085.15	gi|297620544|ref|YP_003708681.1|	-	1.9e-26	91.7	0.0	2.6e-26	91.3	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|297620544|ref|YP_003708681.1|	-	6.4e-10	39.2	0.0	9.4e-09	35.4	0.0	2.1	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|297620544|ref|YP_003708681.1|	-	6.6e-07	29.3	0.0	0.00067	19.7	0.0	2.3	1	1	1	2	2	2	2	Thioredoxin-like
Thioredoxin_6	PF13848.1	gi|297620544|ref|YP_003708681.1|	-	0.00012	21.9	0.0	0.00017	21.4	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin-like	domain
AhpC-TSA	PF00578.16	gi|297620544|ref|YP_003708681.1|	-	0.00012	21.7	0.1	0.0025	17.5	0.0	2.1	1	1	1	2	2	2	1	AhpC/TSA	family
Thioredoxin_7	PF13899.1	gi|297620544|ref|YP_003708681.1|	-	0.00048	20.0	0.0	0.00083	19.3	0.0	1.5	1	1	0	1	1	1	1	Thioredoxin-like
Thioredoxin_9	PF14595.1	gi|297620544|ref|YP_003708681.1|	-	0.0035	16.9	0.0	0.0042	16.6	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_3	PF13192.1	gi|297620544|ref|YP_003708681.1|	-	0.014	15.1	0.0	0.021	14.6	0.0	1.4	1	0	0	1	1	1	0	Thioredoxin	domain
DIM1	PF02966.11	gi|297620544|ref|YP_003708681.1|	-	0.016	14.6	0.0	0.02	14.3	0.0	1.1	1	0	0	1	1	1	0	Mitosis	protein	DIM1
Redoxin	PF08534.5	gi|297620544|ref|YP_003708681.1|	-	0.021	14.3	0.1	0.035	13.6	0.1	1.5	1	1	0	1	1	1	0	Redoxin
DUF953	PF06110.6	gi|297620544|ref|YP_003708681.1|	-	0.026	13.9	0.1	0.31	10.4	0.0	2.3	1	1	1	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF953)
BPL_LplA_LipB	PF03099.14	gi|297620545|ref|YP_003708682.1|	-	7e-17	61.6	0.0	9.2e-17	61.2	0.0	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
BPL_C	PF02237.12	gi|297620545|ref|YP_003708682.1|	-	0.005	16.4	0.0	0.011	15.4	0.0	1.5	1	0	0	1	1	1	1	Biotin	protein	ligase	C	terminal	domain
FTSW_RODA_SPOVE	PF01098.14	gi|297620546|ref|YP_003708683.1|	-	1.2e-66	224.9	22.6	1.5e-66	224.6	15.7	1.0	1	0	0	1	1	1	1	Cell	cycle	protein
DUF2459	PF09601.5	gi|297620546|ref|YP_003708683.1|	-	0.044	13.4	0.2	0.13	11.9	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2459)
ABM	PF03992.11	gi|297620547|ref|YP_003708684.1|	-	0.089	12.8	0.0	0.16	12.0	0.0	1.3	1	0	0	1	1	1	0	Antibiotic	biosynthesis	monooxygenase
Ribosomal_S10	PF00338.17	gi|297620549|ref|YP_003708686.1|	-	7.6e-39	131.4	0.1	8.6e-39	131.3	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
GTP_EFTU	PF00009.22	gi|297620550|ref|YP_003708687.1|	-	2.4e-63	213.0	0.2	4.2e-63	212.1	0.2	1.4	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.13	gi|297620550|ref|YP_003708687.1|	-	7.4e-42	141.7	0.3	4.1e-41	139.3	0.2	2.3	2	0	0	2	2	2	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.1	gi|297620550|ref|YP_003708687.1|	-	3.6e-36	122.8	0.1	8.6e-36	121.6	0.1	1.7	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.19	gi|297620550|ref|YP_003708687.1|	-	5.7e-30	103.0	0.1	2.3e-29	101.1	0.0	2.1	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.20	gi|297620550|ref|YP_003708687.1|	-	2.1e-13	50.1	0.1	1.1e-12	47.8	0.0	2.3	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|297620550|ref|YP_003708687.1|	-	6.7e-05	22.8	0.0	0.00017	21.5	0.0	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
AIG1	PF04548.11	gi|297620550|ref|YP_003708687.1|	-	0.01	14.9	0.0	0.021	13.9	0.0	1.4	1	0	0	1	1	1	0	AIG1	family
Porphobil_deamC	PF03900.10	gi|297620550|ref|YP_003708687.1|	-	0.095	12.8	0.0	0.3	11.1	0.0	1.9	1	0	0	1	1	1	0	Porphobilinogen	deaminase,	C-terminal	domain
Ribosomal_S7	PF00177.16	gi|297620551|ref|YP_003708688.1|	-	8.1e-61	203.9	2.5	9.1e-61	203.7	1.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
ParB	PF08775.5	gi|297620551|ref|YP_003708688.1|	-	0.079	13.2	0.2	0.47	10.7	0.0	1.9	1	1	1	2	2	2	0	ParB	family
Ribosom_S12_S23	PF00164.20	gi|297620552|ref|YP_003708689.1|	-	2.8e-54	181.7	3.4	3.1e-54	181.6	2.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
Acyltransferase	PF01553.16	gi|297620553|ref|YP_003708690.1|	-	3.5e-23	81.5	0.0	5e-23	81.0	0.0	1.2	1	0	0	1	1	1	1	Acyltransferase
Cytidylate_kin	PF02224.13	gi|297620556|ref|YP_003708693.1|	-	4.6e-52	175.6	0.2	5.5e-52	175.3	0.2	1.1	1	0	0	1	1	1	1	Cytidylate	kinase
AAA_17	PF13207.1	gi|297620556|ref|YP_003708693.1|	-	1e-11	45.7	0.2	4.9e-10	40.2	0.0	2.1	1	1	1	2	2	2	1	AAA	domain
Cytidylate_kin2	PF13189.1	gi|297620556|ref|YP_003708693.1|	-	4e-09	36.6	1.5	1.2e-08	35.0	1.0	1.8	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.1	gi|297620556|ref|YP_003708693.1|	-	1.2e-07	32.0	0.1	3.2e-07	30.7	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|297620556|ref|YP_003708693.1|	-	8.6e-06	25.7	0.7	0.0011	18.8	0.1	2.5	2	1	1	3	3	3	1	Shikimate	kinase
AAA	PF00004.24	gi|297620556|ref|YP_003708693.1|	-	0.00031	20.9	0.0	0.00068	19.8	0.0	1.7	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|297620556|ref|YP_003708693.1|	-	0.0017	18.4	0.2	0.01	16.0	0.0	2.1	2	1	0	2	2	2	1	AAA	domain
CoaE	PF01121.15	gi|297620556|ref|YP_003708693.1|	-	0.0021	17.5	0.1	0.0032	16.8	0.1	1.5	1	1	0	1	1	1	1	Dephospho-CoA	kinase
AAA_33	PF13671.1	gi|297620556|ref|YP_003708693.1|	-	0.0035	17.2	0.0	0.008	16.0	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|297620556|ref|YP_003708693.1|	-	0.0041	16.8	0.2	0.011	15.5	0.1	1.7	2	0	0	2	2	2	1	Part	of	AAA	domain
ADK	PF00406.17	gi|297620556|ref|YP_003708693.1|	-	0.027	14.3	0.1	0.38	10.6	0.0	2.4	2	1	0	2	2	2	0	Adenylate	kinase
ABC_tran	PF00005.22	gi|297620556|ref|YP_003708693.1|	-	0.04	14.2	0.1	0.089	13.0	0.1	1.8	1	1	0	1	1	1	0	ABC	transporter
AAA_5	PF07728.9	gi|297620556|ref|YP_003708693.1|	-	0.048	13.3	0.0	0.38	10.4	0.0	2.1	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_10	PF12846.2	gi|297620556|ref|YP_003708693.1|	-	0.17	11.2	1.0	2.2	7.6	0.7	2.1	1	1	0	1	1	1	0	AAA-like	domain
Thymidylate_kin	PF02223.12	gi|297620556|ref|YP_003708693.1|	-	0.26	10.6	3.7	4.4	6.6	0.0	3.0	1	1	2	3	3	3	0	Thymidylate	kinase
CTP_transf_1	PF01148.15	gi|297620557|ref|YP_003708694.1|	-	7.3e-54	183.1	13.6	8.2e-54	182.9	9.5	1.0	1	0	0	1	1	1	1	Cytidylyltransferase	family
DUF46	PF01864.12	gi|297620557|ref|YP_003708694.1|	-	9.9e-06	25.5	0.5	9.9e-06	25.5	0.4	2.0	2	1	0	2	2	2	1	Putative	integral	membrane	protein	DUF46
Prenyltransf	PF01255.14	gi|297620558|ref|YP_003708695.1|	-	2.7e-71	239.2	0.0	3.1e-71	239.0	0.0	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
Adenylsucc_synt	PF00709.16	gi|297620559|ref|YP_003708696.1|	-	6.2e-167	555.5	0.0	7e-167	555.3	0.0	1.0	1	0	0	1	1	1	1	Adenylosuccinate	synthetase
GTP_EFTU	PF00009.22	gi|297620560|ref|YP_003708697.1|	-	1.3e-51	174.6	0.2	1.9e-51	174.1	0.2	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
LepA_C	PF06421.7	gi|297620560|ref|YP_003708697.1|	-	3.6e-49	165.1	1.7	3.6e-49	165.1	1.2	1.7	2	0	0	2	2	2	1	GTP-binding	protein	LepA	C-terminus
EFG_C	PF00679.19	gi|297620560|ref|YP_003708697.1|	-	9.5e-20	70.2	0.0	2.4e-19	68.9	0.0	1.8	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.20	gi|297620560|ref|YP_003708697.1|	-	6.5e-10	38.9	1.0	1.6e-09	37.7	0.7	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
EFG_II	PF14492.1	gi|297620560|ref|YP_003708697.1|	-	4.2e-07	29.7	0.0	4.4e-06	26.4	0.0	2.3	1	1	0	1	1	1	1	Elongation	Factor	G,	domain	II
Ras	PF00071.17	gi|297620560|ref|YP_003708697.1|	-	6.7e-05	22.3	0.0	0.00012	21.5	0.0	1.4	1	0	0	1	1	1	1	Ras	family
MMR_HSR1	PF01926.18	gi|297620560|ref|YP_003708697.1|	-	8.5e-05	22.4	0.0	0.00018	21.4	0.0	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Arf	PF00025.16	gi|297620560|ref|YP_003708697.1|	-	0.0038	16.4	0.1	0.02	14.1	0.0	2.2	2	0	0	2	2	2	1	ADP-ribosylation	factor	family
SRPRB	PF09439.5	gi|297620560|ref|YP_003708697.1|	-	0.023	13.8	0.0	0.067	12.4	0.0	1.8	1	1	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
Miro	PF08477.8	gi|297620560|ref|YP_003708697.1|	-	0.051	14.0	0.0	0.1	13.1	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
TPK_catalytic	PF04263.11	gi|297620561|ref|YP_003708698.1|	-	6.2e-25	87.1	0.0	8.7e-25	86.6	0.0	1.2	1	0	0	1	1	1	1	Thiamin	pyrophosphokinase,	catalytic	domain
TPK_B1_binding	PF04265.9	gi|297620561|ref|YP_003708698.1|	-	1.4e-08	34.3	0.0	2.2e-08	33.6	0.0	1.3	1	0	0	1	1	1	1	Thiamin	pyrophosphokinase,	vitamin	B1	binding	domain
MAF_flag10	PF01973.13	gi|297620561|ref|YP_003708698.1|	-	0.0018	17.8	0.2	0.0057	16.1	0.0	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	DUF115
FAD_binding_1	PF00667.15	gi|297620562|ref|YP_003708699.1|	-	1.2e-29	103.3	0.0	2.6e-28	98.9	0.0	2.3	1	1	0	1	1	1	1	FAD	binding	domain
NAD_binding_1	PF00175.16	gi|297620562|ref|YP_003708699.1|	-	9.3e-18	64.7	0.0	2.7e-17	63.3	0.0	1.8	2	0	0	2	2	2	1	Oxidoreductase	NAD-binding	domain
TerC	PF03741.11	gi|297620563|ref|YP_003708700.1|	-	1.8e-45	154.6	17.3	2.4e-45	154.2	12.0	1.1	1	0	0	1	1	1	1	Integral	membrane	protein	TerC	family
Corona_M	PF01635.13	gi|297620563|ref|YP_003708700.1|	-	0.092	11.6	2.5	0.16	10.9	1.8	1.4	1	0	0	1	1	1	0	Coronavirus	M	matrix/glycoprotein
EmrE	PF13536.1	gi|297620563|ref|YP_003708700.1|	-	0.56	10.4	16.4	0.31	11.2	6.9	2.4	1	1	1	2	2	2	0	Multidrug	resistance	efflux	transporter
YgbB	PF02542.11	gi|297620564|ref|YP_003708701.1|	-	7.1e-31	107.1	0.2	7.9e-31	106.9	0.2	1.0	1	0	0	1	1	1	1	YgbB	family
EPSP_synthase	PF00275.15	gi|297620565|ref|YP_003708702.1|	-	8.6e-84	281.3	0.0	9.9e-84	281.1	0.0	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
Radical_SAM	PF04055.16	gi|297620566|ref|YP_003708703.1|	-	3.7e-10	40.2	0.2	1.9e-09	37.9	0.1	2.0	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|297620566|ref|YP_003708703.1|	-	4.4e-08	33.1	0.0	9.6e-08	32.0	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|297620566|ref|YP_003708703.1|	-	1e-07	32.1	0.1	9.5e-07	29.0	0.0	2.3	3	0	0	3	3	3	1	4Fe-4S	single	cluster	domain
Glyco_transf_17	PF04724.8	gi|297620566|ref|YP_003708703.1|	-	0.091	11.7	0.0	0.16	10.9	0.0	1.3	1	0	0	1	1	1	0	Glycosyltransferase	family	17
Abhydrolase_6	PF12697.2	gi|297620567|ref|YP_003708704.1|	-	2e-10	40.9	2.6	7.1e-10	39.1	0.4	2.2	2	1	0	2	2	2	1	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|297620567|ref|YP_003708704.1|	-	1.4e-09	37.8	0.1	2.1e-09	37.3	0.1	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
PGAP1	PF07819.8	gi|297620567|ref|YP_003708704.1|	-	6.4e-09	35.7	0.4	1.5e-08	34.5	0.3	1.6	1	1	0	1	1	1	1	PGAP1-like	protein
Abhydrolase_1	PF00561.15	gi|297620567|ref|YP_003708704.1|	-	5.4e-08	32.6	0.0	8.4e-08	32.0	0.0	1.3	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
Lipase_2	PF01674.13	gi|297620567|ref|YP_003708704.1|	-	1.9e-06	27.3	0.8	4.8e-06	26.0	0.5	1.7	1	1	0	1	1	1	1	Lipase	(class	2)
DUF676	PF05057.9	gi|297620567|ref|YP_003708704.1|	-	3.1e-06	26.6	0.8	7.5e-06	25.3	0.6	1.5	1	1	0	1	1	1	1	Putative	serine	esterase	(DUF676)
Lipase_3	PF01764.20	gi|297620567|ref|YP_003708704.1|	-	5.5e-06	26.0	0.0	1e-05	25.1	0.0	1.5	1	0	0	1	1	1	1	Lipase	(class	3)
DUF915	PF06028.6	gi|297620567|ref|YP_003708704.1|	-	2.9e-05	23.2	0.0	0.00011	21.4	0.0	1.8	1	1	1	2	2	2	1	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
LCAT	PF02450.10	gi|297620567|ref|YP_003708704.1|	-	8.7e-05	21.6	0.0	0.00013	21.0	0.0	1.1	1	0	0	1	1	1	1	Lecithin:cholesterol	acyltransferase
Thioesterase	PF00975.15	gi|297620567|ref|YP_003708704.1|	-	9.7e-05	22.6	0.0	0.00015	22.0	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	domain
Abhydrolase_8	PF06259.7	gi|297620567|ref|YP_003708704.1|	-	0.0013	18.2	0.0	0.0022	17.5	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase
Abhydrolase_2	PF02230.11	gi|297620567|ref|YP_003708704.1|	-	0.0031	16.9	0.1	0.86	8.9	0.0	2.6	1	1	2	3	3	3	1	Phospholipase/Carboxylesterase
DUF900	PF05990.7	gi|297620567|ref|YP_003708704.1|	-	0.0054	16.0	0.0	0.013	14.8	0.0	1.6	2	0	0	2	2	2	1	Alpha/beta	hydrolase	of	unknown	function	(DUF900)
Esterase	PF00756.15	gi|297620567|ref|YP_003708704.1|	-	0.0098	15.3	0.0	0.016	14.6	0.0	1.2	1	0	0	1	1	1	1	Putative	esterase
Abhydro_lipase	PF04083.11	gi|297620567|ref|YP_003708704.1|	-	0.026	13.8	0.1	0.057	12.7	0.0	1.5	1	0	0	1	1	1	0	Partial	alpha/beta-hydrolase	lipase	region
Ser_hydrolase	PF06821.8	gi|297620567|ref|YP_003708704.1|	-	0.055	13.0	0.0	0.12	11.9	0.0	1.5	1	0	0	1	1	1	0	Serine	hydrolase
IncA	PF04156.9	gi|297620567|ref|YP_003708704.1|	-	3.3	7.2	5.5	5.5	6.5	3.8	1.3	1	0	0	1	1	1	0	IncA	protein
VWA_2	PF13519.1	gi|297620568|ref|YP_003708705.1|	-	1e-24	87.5	0.0	1.3e-24	87.2	0.0	1.1	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|297620568|ref|YP_003708705.1|	-	5.5e-13	49.0	0.1	7.5e-13	48.5	0.0	1.2	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|297620568|ref|YP_003708705.1|	-	0.17	10.9	0.0	4.1	6.4	0.0	2.3	2	0	0	2	2	2	0	VWA	domain	containing	CoxE-like	protein
VWA_2	PF13519.1	gi|297620569|ref|YP_003708706.1|	-	2.4e-24	86.3	0.0	3.2e-24	85.9	0.0	1.1	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|297620569|ref|YP_003708706.1|	-	2.5e-11	43.6	0.0	3.3e-11	43.2	0.0	1.1	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|297620569|ref|YP_003708706.1|	-	0.0027	17.4	0.0	0.031	13.9	0.0	2.4	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
vWA-TerF-like	PF10138.4	gi|297620569|ref|YP_003708706.1|	-	0.033	14.0	0.0	0.066	13.0	0.0	1.4	1	1	0	1	1	1	0	vWA	found	in	TerF	C	terminus
VWA_CoxE	PF05762.9	gi|297620569|ref|YP_003708706.1|	-	0.041	13.0	0.4	0.12	11.5	0.3	1.6	1	1	0	1	1	1	0	VWA	domain	containing	CoxE-like	protein
DUF4131	PF13567.1	gi|297620569|ref|YP_003708706.1|	-	0.64	9.3	2.9	0.54	9.6	0.2	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
TPR_11	PF13414.1	gi|297620570|ref|YP_003708707.1|	-	0.0041	16.7	1.4	0.0041	16.7	1.0	4.5	4	0	0	4	4	4	1	TPR	repeat
TPR_1	PF00515.23	gi|297620570|ref|YP_003708707.1|	-	0.0049	16.4	4.7	7.3	6.3	0.0	4.8	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297620570|ref|YP_003708707.1|	-	0.0096	15.8	1.7	0.0096	15.8	1.2	4.4	5	1	0	5	5	5	1	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|297620570|ref|YP_003708707.1|	-	0.012	15.9	10.0	0.052	13.8	0.0	5.1	4	2	1	5	5	5	0	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297620570|ref|YP_003708707.1|	-	0.038	14.1	0.6	0.2	11.8	0.1	2.6	2	0	0	2	2	2	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_2	PF07719.12	gi|297620570|ref|YP_003708707.1|	-	0.14	12.1	18.9	6.2	7.0	0.7	6.8	7	0	0	7	7	7	0	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|297620570|ref|YP_003708707.1|	-	9	6.3	8.7	4.9	7.1	0.2	4.3	4	0	0	4	4	4	0	Tetratricopeptide	repeat
BatD	PF13584.1	gi|297620571|ref|YP_003708708.1|	-	4.7e-30	104.6	0.4	3e-29	101.9	0.3	1.9	1	1	0	1	1	1	1	Oxygen	tolerance
TPR_1	PF00515.23	gi|297620572|ref|YP_003708709.1|	-	7.6e-08	31.6	1.0	1.7e-07	30.5	0.7	1.7	1	0	0	1	1	1	1	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|297620572|ref|YP_003708709.1|	-	8.8e-06	25.2	0.2	1.8e-05	24.2	0.1	1.5	1	1	0	1	1	1	1	TPR	repeat
TPR_12	PF13424.1	gi|297620572|ref|YP_003708709.1|	-	1.4e-05	24.9	0.2	2.5e-05	24.1	0.1	1.5	1	0	0	1	1	1	1	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297620572|ref|YP_003708709.1|	-	3.3e-05	23.4	1.5	5.8e-05	22.6	0.4	2.0	2	0	0	2	2	2	1	Tetratricopeptide	repeat
SH3_3	PF08239.6	gi|297620572|ref|YP_003708709.1|	-	0.0004	20.5	0.1	0.00078	19.5	0.0	1.5	1	0	0	1	1	1	1	Bacterial	SH3	domain
O-antigen_lig	PF13425.1	gi|297620572|ref|YP_003708709.1|	-	0.00063	19.7	2.2	0.3	11.0	1.0	2.2	2	0	0	2	2	2	2	O-antigen	ligase	like	membrane	protein
DUF4131	PF13567.1	gi|297620572|ref|YP_003708709.1|	-	0.0012	18.3	0.3	0.011	15.1	0.6	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4131)
TPR_8	PF13181.1	gi|297620572|ref|YP_003708709.1|	-	0.0015	18.1	0.3	0.0015	18.1	0.2	2.3	3	0	0	3	3	2	1	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297620572|ref|YP_003708709.1|	-	0.0054	17.3	0.2	0.01	16.5	0.1	1.5	1	0	0	1	1	1	1	Tetratricopeptide	repeat
SH3_1	PF00018.23	gi|297620572|ref|YP_003708709.1|	-	0.018	14.3	0.0	0.033	13.5	0.0	1.4	1	0	0	1	1	1	0	SH3	domain
TPR_7	PF13176.1	gi|297620572|ref|YP_003708709.1|	-	0.019	14.7	0.0	0.043	13.6	0.0	1.7	1	0	0	1	1	1	0	Tetratricopeptide	repeat
SH3_2	PF07653.12	gi|297620572|ref|YP_003708709.1|	-	0.08	12.4	0.0	0.14	11.6	0.0	1.5	1	0	0	1	1	1	0	Variant	SH3	domain
MHC2-interact	PF09307.5	gi|297620572|ref|YP_003708709.1|	-	0.094	12.5	0.0	0.17	11.6	0.0	1.3	1	0	0	1	1	1	0	CLIP,	MHC2	interacting
Pyrophosphatase	PF00719.14	gi|297620573|ref|YP_003708710.1|	-	1.8e-35	121.6	0.0	2.1e-35	121.4	0.0	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
DUF2600	PF10776.4	gi|297620574|ref|YP_003708711.1|	-	0.037	12.8	0.1	0.054	12.3	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2600)
PP1_inhibitor	PF05361.7	gi|297620574|ref|YP_003708711.1|	-	0.13	11.9	3.6	2.3	7.8	0.1	2.5	2	0	0	2	2	2	0	PKC-activated	protein	phosphatase-1	inhibitor
Ribonuc_red_lgC	PF02867.10	gi|297620575|ref|YP_003708712.1|	-	0.00068	18.3	0.5	0.03	12.9	0.0	2.7	2	1	0	3	3	3	2	Ribonucleotide	reductase,	barrel	domain
Kelch_1	PF01344.20	gi|297620575|ref|YP_003708712.1|	-	0.062	12.8	0.3	0.22	11.0	0.0	2.0	2	0	0	2	2	2	0	Kelch	motif
AMP-binding	PF00501.23	gi|297620576|ref|YP_003708713.1|	-	7.9e-100	334.1	0.0	1e-99	333.7	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|297620576|ref|YP_003708713.1|	-	1.2e-16	61.3	0.2	4.1e-16	59.6	0.1	2.0	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
Metallophos	PF00149.23	gi|297620578|ref|YP_003708715.1|	-	3.2e-17	62.5	0.1	4.4e-17	62.1	0.1	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|297620578|ref|YP_003708715.1|	-	2.3e-08	34.0	0.0	3.8e-08	33.3	0.0	1.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
OMPdecase	PF00215.19	gi|297620579|ref|YP_003708716.1|	-	1.2e-72	243.9	0.0	1.4e-72	243.7	0.0	1.0	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Pribosyltran	PF00156.22	gi|297620580|ref|YP_003708717.1|	-	1e-11	44.6	0.0	2.8e-11	43.1	0.0	1.7	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
DUF674	PF05056.7	gi|297620580|ref|YP_003708717.1|	-	0.062	11.9	0.0	0.086	11.4	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF674)
DHO_dh	PF01180.16	gi|297620581|ref|YP_003708718.1|	-	9.9e-15	54.2	0.0	1.5e-12	47.0	0.0	2.0	2	0	0	2	2	2	2	Dihydroorotate	dehydrogenase
Dus	PF01207.12	gi|297620581|ref|YP_003708718.1|	-	6.5e-05	21.9	0.0	0.036	12.8	0.0	2.0	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
Amidohydro_4	PF13147.1	gi|297620582|ref|YP_003708719.1|	-	8.1e-21	75.2	0.0	2e-20	73.9	0.0	1.5	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|297620582|ref|YP_003708719.1|	-	8.7e-14	51.9	0.1	1.1e-12	48.2	0.0	2.1	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|297620582|ref|YP_003708719.1|	-	5.2e-09	35.7	0.1	2.4e-08	33.6	0.0	2.1	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|297620582|ref|YP_003708719.1|	-	0.091	11.9	0.2	8.2	5.5	0.0	2.3	2	0	0	2	2	2	0	Amidohydrolase	family
Usp	PF00582.21	gi|297620582|ref|YP_003708719.1|	-	0.11	12.6	0.5	0.21	11.7	0.1	1.7	2	0	0	2	2	2	0	Universal	stress	protein	family
Amidohydro_2	PF04909.9	gi|297620582|ref|YP_003708719.1|	-	0.13	11.8	0.0	0.63	9.5	0.0	1.9	1	1	0	1	1	1	0	Amidohydrolase
PyrI	PF01948.13	gi|297620583|ref|YP_003708720.1|	-	1.6e-31	108.2	0.2	3e-31	107.3	0.1	1.5	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.10	gi|297620583|ref|YP_003708720.1|	-	4.2e-12	45.3	1.4	4.2e-12	45.3	1.0	1.6	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
Rpr2	PF04032.11	gi|297620583|ref|YP_003708720.1|	-	0.02	14.7	0.2	0.026	14.3	0.1	1.3	1	0	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-BED	PF02892.10	gi|297620583|ref|YP_003708720.1|	-	0.031	14.0	0.2	0.066	12.9	0.1	1.5	1	0	0	1	1	1	0	BED	zinc	finger
zf-C2H2	PF00096.21	gi|297620583|ref|YP_003708720.1|	-	0.07	13.5	0.8	0.12	12.7	0.5	1.4	1	0	0	1	1	1	0	Zinc	finger,	C2H2	type
zf-FCS	PF06467.9	gi|297620583|ref|YP_003708720.1|	-	0.09	12.4	0.5	0.16	11.6	0.4	1.4	1	0	0	1	1	1	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
OTCace_N	PF02729.16	gi|297620584|ref|YP_003708721.1|	-	8.3e-46	155.1	0.0	1.4e-45	154.4	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|297620584|ref|YP_003708721.1|	-	7.3e-35	120.1	0.0	9.9e-35	119.7	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
DUF2490	PF10677.4	gi|297620585|ref|YP_003708722.1|	-	3.1e-14	52.7	11.5	3.7e-14	52.4	8.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2490)
Ku_PK_bind	PF08785.6	gi|297620586|ref|YP_003708723.1|	-	0.0055	16.5	2.9	0.011	15.6	0.1	2.7	2	2	0	3	3	3	1	Ku	C	terminal	domain	like
DUF4404	PF14357.1	gi|297620586|ref|YP_003708723.1|	-	5.4	7.5	8.4	2.2	8.7	0.1	3.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4404)
CPSase_L_D2	PF02786.12	gi|297620587|ref|YP_003708724.1|	-	4.9e-98	326.5	0.2	1.8e-72	243.0	0.0	2.2	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
GATase	PF00117.23	gi|297620587|ref|YP_003708724.1|	-	2.5e-47	160.8	0.0	1.2e-46	158.6	0.0	2.1	2	0	0	2	2	2	1	Glutamine	amidotransferase	class-I
CPSase_sm_chain	PF00988.17	gi|297620587|ref|YP_003708724.1|	-	2.6e-42	143.4	0.0	8.1e-42	141.8	0.0	1.9	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
CPSase_L_chain	PF00289.17	gi|297620587|ref|YP_003708724.1|	-	3.7e-39	133.2	0.0	3.3e-19	68.9	0.0	2.9	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
CPSase_L_D3	PF02787.14	gi|297620587|ref|YP_003708724.1|	-	3.2e-37	127.0	0.0	1.2e-36	125.1	0.0	2.1	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
ATP-grasp_4	PF13535.1	gi|297620587|ref|YP_003708724.1|	-	1.7e-36	125.7	0.0	8.8e-21	74.4	0.0	2.6	2	0	0	2	2	2	2	ATP-grasp	domain
MGS	PF02142.17	gi|297620587|ref|YP_003708724.1|	-	3.2e-16	59.0	0.1	1.1e-14	54.1	0.0	3.1	2	1	0	2	2	2	1	MGS-like	domain
ATP-grasp	PF02222.17	gi|297620587|ref|YP_003708724.1|	-	1.9e-15	56.6	0.1	1.2e-09	37.7	0.0	2.3	2	0	0	2	2	2	2	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|297620587|ref|YP_003708724.1|	-	8.3e-15	54.3	0.0	2.1e-08	33.2	0.0	3.7	3	1	0	3	3	3	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
Dala_Dala_lig_C	PF07478.8	gi|297620587|ref|YP_003708724.1|	-	3.5e-14	52.6	0.5	3.9e-08	32.9	0.1	2.4	2	0	0	2	2	2	2	D-ala	D-ala	ligase	C-terminus
Peptidase_C26	PF07722.8	gi|297620587|ref|YP_003708724.1|	-	5.9e-11	42.2	0.5	2.5e-09	36.9	0.4	2.4	1	1	0	1	1	1	1	Peptidase	C26
DJ-1_PfpI	PF01965.19	gi|297620587|ref|YP_003708724.1|	-	0.0023	17.3	0.0	0.0053	16.2	0.0	1.5	1	0	0	1	1	1	1	DJ-1/PfpI	family
ATP-grasp_3	PF02655.9	gi|297620587|ref|YP_003708724.1|	-	0.0041	16.9	0.9	0.034	13.9	0.1	2.8	3	0	0	3	3	3	1	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|297620587|ref|YP_003708724.1|	-	0.0089	15.2	0.0	2.6	7.1	0.0	2.9	3	0	0	3	3	3	1	ATP-grasp	domain
QRPTase_C	PF01729.14	gi|297620587|ref|YP_003708724.1|	-	0.026	14.0	0.1	0.21	11.1	0.0	2.4	1	1	2	3	3	3	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
TPR_11	PF13414.1	gi|297620588|ref|YP_003708725.1|	-	1.1e-07	31.4	0.8	9.7e-06	25.1	0.8	2.5	1	1	0	1	1	1	1	TPR	repeat
TPR_2	PF07719.12	gi|297620588|ref|YP_003708725.1|	-	5.3e-06	25.9	2.0	0.015	15.1	0.1	2.6	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|297620588|ref|YP_003708725.1|	-	6.3e-05	22.4	1.7	0.3	10.7	0.1	2.6	2	0	0	2	2	2	2	Tetratricopeptide	repeat
Lactamase_B_2	PF12706.2	gi|297620588|ref|YP_003708725.1|	-	0.0016	17.9	0.2	0.0028	17.2	0.1	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
TPR_8	PF13181.1	gi|297620588|ref|YP_003708725.1|	-	0.002	17.7	0.7	0.38	10.6	0.0	2.8	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297620588|ref|YP_003708725.1|	-	0.0054	17.3	0.0	0.014	16.0	0.0	1.7	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297620588|ref|YP_003708725.1|	-	0.041	13.8	0.5	0.13	12.1	0.4	1.9	1	1	0	1	1	1	0	Tetratricopeptide	repeat
DUF2200	PF09966.4	gi|297620588|ref|YP_003708725.1|	-	0.042	13.7	0.0	3.8	7.4	0.0	2.6	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2200)
TPR_9	PF13371.1	gi|297620588|ref|YP_003708725.1|	-	0.072	12.9	0.1	0.26	11.1	0.0	2.0	2	0	0	2	2	2	0	Tetratricopeptide	repeat
DegT_DnrJ_EryC1	PF01041.12	gi|297620589|ref|YP_003708726.1|	-	1.6e-97	326.7	0.0	1.8e-97	326.6	0.0	1.0	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Beta_elim_lyase	PF01212.16	gi|297620589|ref|YP_003708726.1|	-	4.6e-05	22.7	0.0	9.8e-05	21.6	0.0	1.5	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_1_2	PF00155.16	gi|297620589|ref|YP_003708726.1|	-	0.00063	18.7	0.0	0.001	18.1	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|297620589|ref|YP_003708726.1|	-	0.00073	18.3	0.0	0.0051	15.5	0.0	1.9	2	0	0	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|297620589|ref|YP_003708726.1|	-	0.092	11.0	0.1	0.15	10.3	0.0	1.2	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
TPR_11	PF13414.1	gi|297620591|ref|YP_003708728.1|	-	1.1e-14	53.7	1.9	5.4e-10	38.7	0.7	2.5	1	1	2	3	3	3	2	TPR	repeat
TPR_2	PF07719.12	gi|297620591|ref|YP_003708728.1|	-	4.3e-14	51.2	0.6	3.1e-05	23.5	0.3	3.5	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|297620591|ref|YP_003708728.1|	-	5.1e-14	52.3	7.4	2.1e-08	34.3	0.4	2.2	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297620591|ref|YP_003708728.1|	-	9e-13	48.5	0.5	6e-09	36.3	0.2	2.2	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|297620591|ref|YP_003708728.1|	-	1.5e-11	43.3	1.2	3.9e-06	26.2	0.2	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297620591|ref|YP_003708728.1|	-	1.2e-09	38.1	0.2	9.4e-08	32.0	0.1	2.2	1	1	1	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_14	PF13428.1	gi|297620591|ref|YP_003708728.1|	-	4.9e-09	36.0	1.5	8.6e-05	22.8	0.4	3.1	1	1	2	3	3	3	2	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297620591|ref|YP_003708728.1|	-	5.3e-09	35.8	2.6	3.3e-06	26.9	0.9	2.6	2	1	0	2	2	2	2	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|297620591|ref|YP_003708728.1|	-	9.5e-09	34.9	0.3	3.7e-08	33.1	0.1	2.0	1	1	1	2	2	2	1	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|297620591|ref|YP_003708728.1|	-	2.6e-07	30.2	3.7	0.034	14.3	0.0	3.7	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|297620591|ref|YP_003708728.1|	-	6.8e-07	29.3	2.1	0.18	12.3	0.0	3.3	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297620591|ref|YP_003708728.1|	-	8e-07	28.4	0.6	0.006	16.2	0.1	3.2	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|297620591|ref|YP_003708728.1|	-	2.7e-06	26.7	2.5	0.016	14.9	0.2	3.4	4	0	0	4	4	3	2	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|297620591|ref|YP_003708728.1|	-	8.9e-06	25.4	2.9	0.27	11.2	0.2	3.3	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_15	PF13429.1	gi|297620591|ref|YP_003708728.1|	-	9.8e-05	21.5	0.8	0.0015	17.6	0.4	1.8	1	1	1	2	2	2	1	Tetratricopeptide	repeat
TPR_4	PF07721.9	gi|297620591|ref|YP_003708728.1|	-	0.01	16.2	0.0	11	6.8	0.0	3.4	3	1	0	3	3	3	0	Tetratricopeptide	repeat
Coatomer_E	PF04733.9	gi|297620591|ref|YP_003708728.1|	-	0.013	14.6	0.2	0.02	14.0	0.1	1.4	1	1	0	1	1	1	0	Coatomer	epsilon	subunit
Fis1_TPR_C	PF14853.1	gi|297620591|ref|YP_003708728.1|	-	0.015	15.1	0.9	5.5	6.9	0.0	3.0	1	1	1	3	3	3	0	Fis1	C-terminal	tetratricopeptide	repeat
BTAD	PF03704.12	gi|297620591|ref|YP_003708728.1|	-	0.12	12.7	0.5	0.17	12.1	0.3	1.5	1	1	0	1	1	1	0	Bacterial	transcriptional	activator	domain
TPR_5	PF12688.2	gi|297620591|ref|YP_003708728.1|	-	0.13	12.2	0.3	0.97	9.4	0.2	1.9	1	1	1	2	2	2	0	Tetratrico	peptide	repeat
Methyltransf_5	PF01795.14	gi|297620593|ref|YP_003708730.1|	-	7.3e-107	357.2	0.0	8.1e-107	357.0	0.0	1.0	1	0	0	1	1	1	1	MraW	methylase	family
Methyltransf_31	PF13847.1	gi|297620593|ref|YP_003708730.1|	-	2e-07	30.7	0.0	2.2e-05	24.1	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297620593|ref|YP_003708730.1|	-	3.8e-07	30.6	0.1	1.8e-05	25.3	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297620593|ref|YP_003708730.1|	-	4.3e-07	29.9	0.0	1.4e-06	28.3	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297620593|ref|YP_003708730.1|	-	0.00022	21.5	0.0	0.00039	20.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297620593|ref|YP_003708730.1|	-	0.00045	20.6	0.0	0.011	16.2	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.9	gi|297620593|ref|YP_003708730.1|	-	0.0015	17.9	0.0	1.2	8.5	0.0	2.2	2	0	0	2	2	2	2	Methyltransferase	small	domain
Methyltransf_11	PF08241.7	gi|297620593|ref|YP_003708730.1|	-	0.028	14.8	0.0	0.13	12.8	0.0	1.9	2	0	0	2	2	2	0	Methyltransferase	domain
Lipid_DES	PF08557.5	gi|297620593|ref|YP_003708730.1|	-	0.13	11.5	0.0	0.25	10.6	0.0	1.4	1	0	0	1	1	1	0	Sphingolipid	Delta4-desaturase	(DES)
DivIC	PF04977.10	gi|297620594|ref|YP_003708731.1|	-	7.4e-05	22.1	0.0	9.6e-05	21.7	0.0	1.2	1	0	0	1	1	1	1	Septum	formation	initiator
IL1_propep	PF02394.11	gi|297620594|ref|YP_003708731.1|	-	0.015	15.6	0.0	0.019	15.3	0.0	1.2	1	0	0	1	1	1	0	Interleukin-1	propeptide
bZIP_2	PF07716.10	gi|297620594|ref|YP_003708731.1|	-	0.027	14.3	0.4	0.039	13.7	0.2	1.3	1	0	0	1	1	1	0	Basic	region	leucine	zipper
DUF904	PF06005.7	gi|297620594|ref|YP_003708731.1|	-	0.037	14.3	0.5	0.053	13.8	0.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF904)
DUF3373	PF11853.3	gi|297620594|ref|YP_003708731.1|	-	0.041	12.4	0.0	0.044	12.3	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3373)
DUF2681	PF10883.3	gi|297620594|ref|YP_003708731.1|	-	0.1	12.7	0.1	0.17	12.0	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2681)
FtsL	PF04999.8	gi|297620594|ref|YP_003708731.1|	-	0.18	11.5	1.0	0.34	10.6	0.7	1.4	1	1	0	1	1	1	0	Cell	division	protein	FtsL
Transpeptidase	PF00905.17	gi|297620595|ref|YP_003708732.1|	-	2.5e-43	148.2	0.0	4.6e-43	147.3	0.0	1.5	1	1	0	1	1	1	1	Penicillin	binding	protein	transpeptidase	domain
PBP_dimer	PF03717.10	gi|297620595|ref|YP_003708732.1|	-	7.9e-19	68.4	0.0	1.4e-18	67.5	0.0	1.3	1	0	0	1	1	1	1	Penicillin-binding	Protein	dimerisation	domain
Mur_ligase_M	PF08245.7	gi|297620596|ref|YP_003708733.1|	-	1e-43	149.5	0.0	1.6e-43	148.9	0.0	1.3	1	0	0	1	1	1	1	Mur	ligase	middle	domain
Mur_ligase_C	PF02875.16	gi|297620596|ref|YP_003708733.1|	-	6.4e-22	77.4	0.0	2.1e-21	75.7	0.0	1.9	2	0	0	2	2	2	1	Mur	ligase	family,	glutamate	ligase	domain
Mur_ligase	PF01225.20	gi|297620596|ref|YP_003708733.1|	-	6.4e-10	38.9	0.1	2e-09	37.3	0.1	1.9	1	0	0	1	1	1	1	Mur	ligase	family,	catalytic	domain
Amidase_3	PF01520.13	gi|297620597|ref|YP_003708734.1|	-	2.5e-52	177.1	0.0	3e-52	176.9	0.0	1.0	1	0	0	1	1	1	1	N-acetylmuramoyl-L-alanine	amidase
6PGD	PF00393.14	gi|297620598|ref|YP_003708735.1|	-	1.6e-138	460.8	0.0	2.1e-138	460.4	0.0	1.2	1	0	0	1	1	1	1	6-phosphogluconate	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|297620598|ref|YP_003708735.1|	-	2.8e-51	173.6	0.0	4.1e-51	173.0	0.0	1.3	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Shikimate_DH	PF01488.15	gi|297620598|ref|YP_003708735.1|	-	0.011	15.8	0.0	0.023	14.7	0.0	1.6	1	1	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_11	PF14833.1	gi|297620598|ref|YP_003708735.1|	-	0.033	14.2	0.3	0.21	11.6	0.0	2.4	4	0	0	4	4	4	0	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
Peptidase_M50	PF02163.17	gi|297620599|ref|YP_003708736.1|	-	1.6e-61	206.6	0.0	2e-61	206.3	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M50
PDZ_2	PF13180.1	gi|297620599|ref|YP_003708736.1|	-	1.3e-08	34.5	0.0	0.0024	17.6	0.0	3.5	3	0	0	3	3	3	2	PDZ	domain
Tricorn_PDZ	PF14685.1	gi|297620599|ref|YP_003708736.1|	-	2.5e-08	33.6	0.0	0.0017	18.0	0.0	2.8	2	0	0	2	2	2	2	Tricorn	protease	PDZ	domain
PDZ	PF00595.19	gi|297620599|ref|YP_003708736.1|	-	0.00012	22.1	0.0	0.15	12.2	0.0	2.5	2	0	0	2	2	2	2	PDZ	domain	(Also	known	as	DHR	or	GLGF)
Peptidase_MA_2	PF13485.1	gi|297620599|ref|YP_003708736.1|	-	0.037	14.0	0.1	0.099	12.6	0.0	1.7	1	0	0	1	1	1	0	Peptidase	MA	superfamily
Nairovirus_M	PF07948.6	gi|297620601|ref|YP_003708738.1|	-	0.1	10.7	0.0	0.12	10.4	0.0	1.1	1	0	0	1	1	1	0	Nairovirus	M	polyprotein-like
Enterotoxin_a	PF01375.12	gi|297620601|ref|YP_003708738.1|	-	0.1	11.8	0.0	0.17	11.1	0.0	1.3	1	0	0	1	1	1	0	Heat-labile	enterotoxin	alpha	chain
Peptidase_M4_C	PF02868.10	gi|297620602|ref|YP_003708739.1|	-	5.8e-42	143.2	0.2	9.3e-42	142.5	0.1	1.3	1	0	0	1	1	1	1	Thermolysin	metallopeptidase,	alpha-helical	domain
Peptidase_M4	PF01447.13	gi|297620602|ref|YP_003708739.1|	-	2.5e-31	108.8	0.4	5.1e-31	107.8	0.3	1.5	1	0	0	1	1	1	1	Thermolysin	metallopeptidase,	catalytic	domain
Peptidase_M36	PF02128.10	gi|297620602|ref|YP_003708739.1|	-	0.0029	16.5	0.0	0.0034	16.2	0.0	1.2	1	0	0	1	1	1	1	Fungalysin	metallopeptidase	(M36)
ABC_membrane	PF00664.18	gi|297620603|ref|YP_003708740.1|	-	4.8e-32	111.4	17.4	6.1e-32	111.1	12.1	1.1	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.22	gi|297620603|ref|YP_003708740.1|	-	8.8e-28	97.3	0.0	1.6e-27	96.4	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.14	gi|297620603|ref|YP_003708740.1|	-	6.4e-06	25.5	0.1	6.4e-06	25.5	0.1	2.3	3	0	0	3	3	3	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.1	gi|297620603|ref|YP_003708740.1|	-	3.3e-05	24.0	0.0	0.0027	17.7	0.0	2.5	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|297620603|ref|YP_003708740.1|	-	0.00013	22.7	0.0	0.00029	21.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|297620603|ref|YP_003708740.1|	-	0.0013	17.6	0.4	1.1	8.0	0.0	2.6	3	0	0	3	3	3	2	NB-ARC	domain
ArgK	PF03308.11	gi|297620603|ref|YP_003708740.1|	-	0.0022	16.8	0.1	0.21	10.3	0.0	2.2	2	0	0	2	2	2	1	ArgK	protein
AAA_18	PF13238.1	gi|297620603|ref|YP_003708740.1|	-	0.0089	16.3	0.0	0.049	13.9	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|297620603|ref|YP_003708740.1|	-	0.02	14.8	0.0	0.15	11.9	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|297620603|ref|YP_003708740.1|	-	0.032	13.7	0.1	0.092	12.2	0.1	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|297620603|ref|YP_003708740.1|	-	0.037	14.1	0.0	0.21	11.7	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
CoaE	PF01121.15	gi|297620603|ref|YP_003708740.1|	-	0.063	12.6	0.0	0.43	9.9	0.0	2.2	2	0	0	2	2	2	0	Dephospho-CoA	kinase
DUF258	PF03193.11	gi|297620603|ref|YP_003708740.1|	-	0.075	12.2	0.0	0.27	10.4	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA	PF00004.24	gi|297620603|ref|YP_003708740.1|	-	0.096	12.8	0.6	0.64	10.2	0.1	2.4	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
KAP_NTPase	PF07693.9	gi|297620603|ref|YP_003708740.1|	-	0.098	11.6	0.0	0.15	11.0	0.0	1.3	1	0	0	1	1	1	0	KAP	family	P-loop	domain
AAA_23	PF13476.1	gi|297620603|ref|YP_003708740.1|	-	0.1	12.9	0.4	0.27	11.5	0.1	1.7	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|297620603|ref|YP_003708740.1|	-	0.13	12.2	0.0	0.24	11.3	0.0	1.5	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
Zeta_toxin	PF06414.7	gi|297620603|ref|YP_003708740.1|	-	0.13	11.3	0.0	0.27	10.2	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
ABC_membrane	PF00664.18	gi|297620604|ref|YP_003708741.1|	-	7.1e-39	133.8	12.2	9.5e-39	133.4	8.5	1.1	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.22	gi|297620604|ref|YP_003708741.1|	-	1.1e-31	110.0	0.2	2.2e-31	108.9	0.0	1.6	2	0	0	2	2	1	1	ABC	transporter
SMC_N	PF02463.14	gi|297620604|ref|YP_003708741.1|	-	4.7e-06	26.0	0.0	2.7e-05	23.5	0.0	1.7	1	1	1	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.1	gi|297620604|ref|YP_003708741.1|	-	0.0002	21.4	0.0	0.0004	20.4	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|297620604|ref|YP_003708741.1|	-	0.00029	20.0	0.0	0.00057	19.1	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_21	PF13304.1	gi|297620604|ref|YP_003708741.1|	-	0.0017	18.4	0.3	0.034	14.1	0.0	2.8	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|297620604|ref|YP_003708741.1|	-	0.0031	17.6	0.5	0.032	14.3	0.3	2.3	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|297620604|ref|YP_003708741.1|	-	0.0042	16.1	0.0	0.023	13.7	0.0	2.0	1	1	0	1	1	1	1	Zeta	toxin
MutS_III	PF05192.13	gi|297620604|ref|YP_003708741.1|	-	0.005	16.6	0.0	0.045	13.5	0.0	2.2	2	1	0	2	2	2	1	MutS	domain	III
AAA_17	PF13207.1	gi|297620604|ref|YP_003708741.1|	-	0.0069	17.1	0.1	0.042	14.6	0.0	2.4	3	0	0	3	3	2	1	AAA	domain
T2SE	PF00437.15	gi|297620604|ref|YP_003708741.1|	-	0.019	13.8	0.0	0.041	12.7	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|297620604|ref|YP_003708741.1|	-	0.021	14.3	0.1	0.052	13.0	0.1	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
MMR_HSR1	PF01926.18	gi|297620604|ref|YP_003708741.1|	-	0.022	14.6	0.2	0.1	12.5	0.0	2.2	3	0	0	3	3	3	0	50S	ribosome-binding	GTPase
AAA_10	PF12846.2	gi|297620604|ref|YP_003708741.1|	-	0.024	14.0	0.1	0.061	12.7	0.1	1.6	1	1	0	1	1	1	0	AAA-like	domain
AAA_23	PF13476.1	gi|297620604|ref|YP_003708741.1|	-	0.026	14.8	0.3	0.061	13.6	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
AAA_25	PF13481.1	gi|297620604|ref|YP_003708741.1|	-	0.052	12.9	0.0	0.15	11.4	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
DUF1044	PF06296.7	gi|297620604|ref|YP_003708741.1|	-	0.063	13.1	0.0	0.14	11.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1044)
AAA_30	PF13604.1	gi|297620604|ref|YP_003708741.1|	-	0.072	12.6	0.2	0.91	9.0	0.0	2.5	3	0	0	3	3	3	0	AAA	domain
AAA	PF00004.24	gi|297620604|ref|YP_003708741.1|	-	0.086	13.0	0.3	1.4	9.1	0.2	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|297620604|ref|YP_003708741.1|	-	0.086	13.1	0.1	0.35	11.1	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
SbcCD_C	PF13558.1	gi|297620604|ref|YP_003708741.1|	-	0.13	12.2	0.3	0.71	9.8	0.2	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
DUF3784	PF12650.2	gi|297620604|ref|YP_003708741.1|	-	2.7	7.9	9.4	9.3	6.2	0.4	3.3	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3784)
YcfA	PF07927.7	gi|297620605|ref|YP_003708742.1|	-	4.6e-11	42.4	0.1	1.4e-10	40.8	0.1	1.9	1	0	0	1	1	1	1	YcfA-like	protein
PMC2NT	PF08066.7	gi|297620605|ref|YP_003708742.1|	-	0.011	16.0	0.6	0.34	11.2	0.0	3.3	2	0	0	2	2	2	0	PMC2NT	(NUC016)	domain
QueF_N	PF14819.1	gi|297620607|ref|YP_003708744.1|	-	3.5e-45	152.5	0.0	5.9e-45	151.8	0.0	1.4	1	0	0	1	1	1	1	Nitrile	reductase,	7-cyano-7-deazaguanine-reductase	N-term
QueF	PF14489.1	gi|297620607|ref|YP_003708744.1|	-	3.4e-31	107.0	0.0	5.4e-24	83.9	0.0	2.3	2	0	0	2	2	2	2	QueF-like	protein
RsgI_N	PF12791.2	gi|297620609|ref|YP_003708746.1|	-	0.043	13.4	0.1	0.12	12.0	0.0	1.8	2	0	0	2	2	2	0	Anti-sigma	factor	N-terminus
SEC-C	PF02810.10	gi|297620610|ref|YP_003708747.1|	-	1.5e-05	24.4	7.8	2.7e-05	23.5	5.4	1.5	1	0	0	1	1	1	1	SEC-C	motif
DUF4440	PF14534.1	gi|297620611|ref|YP_003708748.1|	-	1.8e-07	31.3	0.0	2.3e-07	31.0	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4440)
CaMKII_AD	PF08332.5	gi|297620611|ref|YP_003708748.1|	-	0.014	15.3	0.0	0.019	14.8	0.0	1.1	1	0	0	1	1	1	0	Calcium/calmodulin	dependent	protein	kinase	II	Association
DUF3110	PF11360.3	gi|297620611|ref|YP_003708748.1|	-	0.075	12.8	0.0	0.17	11.7	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3110)
Sipho_Gp157	PF05565.6	gi|297620612|ref|YP_003708749.1|	-	0.091	12.3	0.2	0.14	11.7	0.1	1.3	1	0	0	1	1	1	0	Siphovirus	Gp157
Peptidase_M15_3	PF08291.6	gi|297620613|ref|YP_003708750.1|	-	6.5e-06	25.9	0.0	9.8e-06	25.3	0.0	1.3	1	0	0	1	1	1	1	Peptidase	M15
Peptidase_M15_2	PF05951.8	gi|297620613|ref|YP_003708750.1|	-	0.023	14.1	0.0	0.038	13.4	0.0	1.3	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF882)
Fer4_12	PF13353.1	gi|297620613|ref|YP_003708750.1|	-	0.11	12.5	0.0	0.42	10.7	0.0	2.0	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
HAD_2	PF13419.1	gi|297620614|ref|YP_003708751.1|	-	6e-18	65.6	0.0	7.5e-18	65.3	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|297620614|ref|YP_003708751.1|	-	4.4e-08	33.8	0.0	5.2e-07	30.3	0.0	2.0	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
NT5C	PF06941.7	gi|297620614|ref|YP_003708751.1|	-	0.0023	17.4	0.3	0.2	11.1	0.2	2.2	1	1	0	1	1	1	1	5'	nucleotidase,	deoxy	(Pyrimidine),	cytosolic	type	C	protein	(NT5C)
HAD	PF12710.2	gi|297620614|ref|YP_003708751.1|	-	0.02	15.0	0.0	0.024	14.7	0.0	1.2	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|297620614|ref|YP_003708751.1|	-	0.088	12.7	0.0	5.9	6.8	0.0	2.3	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
EMG1	PF03587.9	gi|297620614|ref|YP_003708751.1|	-	0.11	11.7	0.0	0.15	11.3	0.0	1.3	1	0	0	1	1	1	0	EMG1/NEP1	methyltransferase
PseudoU_synth_1	PF01416.15	gi|297620615|ref|YP_003708752.1|	-	9.2e-36	122.4	0.0	1.4e-20	73.6	0.0	2.2	2	0	0	2	2	2	2	tRNA	pseudouridine	synthase
DUF2344	PF10105.4	gi|297620615|ref|YP_003708752.1|	-	0.0022	17.4	0.0	0.0036	16.8	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2344)
Metallophos	PF00149.23	gi|297620617|ref|YP_003708754.1|	-	1.7e-11	43.8	0.6	6.1e-11	42.0	0.4	1.8	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|297620617|ref|YP_003708754.1|	-	5.8e-09	35.9	0.0	8.7e-09	35.3	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
SWIB	PF02201.13	gi|297620618|ref|YP_003708755.1|	-	8e-29	99.1	0.0	9.2e-29	98.9	0.0	1.1	1	0	0	1	1	1	1	SWIB/MDM2	domain
DUF3107	PF11305.3	gi|297620618|ref|YP_003708755.1|	-	0.078	12.8	0.0	0.13	12.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3107)
UDPGP	PF01704.13	gi|297620619|ref|YP_003708756.1|	-	1.3e-06	27.2	0.0	1.9e-06	26.6	0.0	1.2	1	0	0	1	1	1	1	UTP--glucose-1-phosphate	uridylyltransferase
YadA_anchor	PF03895.10	gi|297620621|ref|YP_003708758.1|	-	0.055	13.4	0.7	0.095	12.7	0.5	1.4	1	0	0	1	1	1	0	YadA-like	C-terminal	region
PsbY	PF06298.6	gi|297620621|ref|YP_003708758.1|	-	0.12	11.8	0.0	0.27	10.7	0.0	1.6	1	0	0	1	1	1	0	Photosystem	II	protein	Y	(PsbY)
YadA_head	PF05658.9	gi|297620621|ref|YP_003708758.1|	-	0.68	10.2	0.1	0.68	10.2	0.0	2.5	3	0	0	3	3	3	0	Head	domain	of	trimeric	autotransporter	adhesin
Branch_AA_trans	PF05525.8	gi|297620622|ref|YP_003708759.1|	-	9.3e-63	212.2	31.4	1.1e-62	212.0	21.8	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	protein
RF-1	PF00472.15	gi|297620623|ref|YP_003708760.1|	-	1.6e-38	130.9	0.0	2.7e-38	130.2	0.0	1.4	1	0	0	1	1	1	1	RF-1	domain
PCRF	PF03462.13	gi|297620623|ref|YP_003708760.1|	-	9.2e-31	105.9	0.1	2.8e-30	104.3	0.1	1.9	1	0	0	1	1	1	1	PCRF	domain
MIR	PF02815.14	gi|297620623|ref|YP_003708760.1|	-	0.058	12.9	0.0	0.086	12.3	0.0	1.3	1	0	0	1	1	1	0	MIR	domain
Acetyltransf_1	PF00583.19	gi|297620624|ref|YP_003708761.1|	-	2.3e-12	46.7	0.1	3.2e-12	46.2	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_4	PF13420.1	gi|297620624|ref|YP_003708761.1|	-	8.3e-09	35.5	0.0	1.1e-08	35.1	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|297620624|ref|YP_003708761.1|	-	1.1e-08	35.3	0.0	1.5e-08	34.9	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|297620624|ref|YP_003708761.1|	-	1.3e-07	31.6	0.0	1.7e-07	31.3	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|297620624|ref|YP_003708761.1|	-	6.4e-07	29.3	0.0	8.1e-07	29.0	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|297620624|ref|YP_003708761.1|	-	3e-06	27.2	0.1	4.5e-06	26.7	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|297620624|ref|YP_003708761.1|	-	8.3e-06	25.4	0.0	1.3e-05	24.8	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_9	PF13527.1	gi|297620624|ref|YP_003708761.1|	-	0.12	12.2	0.0	0.18	11.6	0.0	1.3	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
SprT-like	PF10263.4	gi|297620625|ref|YP_003708762.1|	-	0.0015	18.2	2.3	0.0026	17.4	1.0	1.8	2	1	0	2	2	2	1	SprT-like	family
Peptidase_M13_N	PF05649.8	gi|297620625|ref|YP_003708762.1|	-	0.0093	15.0	0.3	0.012	14.7	0.2	1.1	1	0	0	1	1	1	1	Peptidase	family	M13
Transcrip_reg	PF01709.15	gi|297620626|ref|YP_003708763.1|	-	4.6e-89	297.5	2.1	5.2e-89	297.4	1.5	1.0	1	0	0	1	1	1	1	Transcriptional	regulator
Chorismate_bind	PF00425.13	gi|297620627|ref|YP_003708764.1|	-	9.9e-87	290.5	0.0	1.2e-86	290.2	0.0	1.1	1	0	0	1	1	1	1	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.8	gi|297620627|ref|YP_003708764.1|	-	6.2e-06	26.2	0.3	0.00024	21.1	0.3	3.0	2	1	0	2	2	2	1	Anthranilate	synthase	component	I,	N	terminal	region
BLOC1_2	PF10046.4	gi|297620628|ref|YP_003708765.1|	-	0.00053	20.0	18.2	0.17	12.0	0.9	3.5	2	1	0	3	3	3	2	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF972	PF06156.8	gi|297620628|ref|YP_003708765.1|	-	0.00062	20.0	20.5	0.5	10.7	1.7	3.2	1	1	1	3	3	3	3	Protein	of	unknown	function	(DUF972)
FUSC_2	PF13515.1	gi|297620628|ref|YP_003708765.1|	-	0.037	13.9	7.4	0.058	13.3	5.2	1.2	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein-like
DUF1664	PF07889.7	gi|297620628|ref|YP_003708765.1|	-	0.052	13.3	14.3	0.1	12.3	0.9	3.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1664)
Laminin_I	PF06008.9	gi|297620628|ref|YP_003708765.1|	-	0.055	12.7	22.1	0.41	9.9	5.0	2.9	1	1	2	3	3	3	0	Laminin	Domain	I
COG2	PF06148.6	gi|297620628|ref|YP_003708765.1|	-	0.063	13.1	16.0	0.2	11.5	4.8	2.7	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
FlaC_arch	PF05377.6	gi|297620628|ref|YP_003708765.1|	-	0.076	12.9	14.1	4.8	7.1	0.1	5.4	4	1	1	5	5	5	0	Flagella	accessory	protein	C	(FlaC)
Baculo_PEP_C	PF04513.7	gi|297620628|ref|YP_003708765.1|	-	0.19	11.5	4.6	2.1	8.1	0.2	3.0	1	1	1	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF4225	PF13988.1	gi|297620628|ref|YP_003708765.1|	-	0.2	11.1	0.1	0.2	11.1	0.1	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF4225)
Tup_N	PF08581.5	gi|297620628|ref|YP_003708765.1|	-	0.26	11.4	0.1	0.26	11.4	0.0	3.8	2	1	2	4	4	4	0	Tup	N-terminal
V_ATPase_I	PF01496.14	gi|297620628|ref|YP_003708765.1|	-	0.29	8.9	20.4	0.12	10.2	5.4	2.1	1	1	1	2	2	2	0	V-type	ATPase	116kDa	subunit	family
Tweety	PF04906.8	gi|297620628|ref|YP_003708765.1|	-	0.32	9.3	2.5	2.4	6.5	0.0	2.3	2	0	0	2	2	2	0	Tweety
Tropomyosin_1	PF12718.2	gi|297620628|ref|YP_003708765.1|	-	0.42	10.4	32.3	0.05	13.4	7.2	3.7	1	1	2	4	4	4	0	Tropomyosin	like
Syntaxin-6_N	PF09177.6	gi|297620628|ref|YP_003708765.1|	-	0.66	10.4	13.3	2.4	8.6	1.3	3.5	1	1	3	4	4	4	0	Syntaxin	6,	N-terminal
DUF4200	PF13863.1	gi|297620628|ref|YP_003708765.1|	-	0.81	9.6	34.8	0.053	13.4	4.6	3.9	2	1	0	4	4	4	0	Domain	of	unknown	function	(DUF4200)
Sec34	PF04136.10	gi|297620628|ref|YP_003708765.1|	-	0.86	9.2	11.5	0.23	11.1	0.5	3.2	1	1	1	3	3	3	0	Sec34-like	family
Streptin-Immun	PF11083.3	gi|297620628|ref|YP_003708765.1|	-	1.1	9.3	12.3	0.35	10.8	0.4	3.7	2	1	1	3	3	3	0	Lantibiotic	streptin	immunity	protein
MCPsignal	PF00015.16	gi|297620628|ref|YP_003708765.1|	-	1.3	8.5	13.7	0.023	14.2	0.6	2.7	2	1	1	3	3	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Laminin_II	PF06009.7	gi|297620628|ref|YP_003708765.1|	-	1.3	8.7	17.5	2.9	7.6	1.6	3.9	1	1	3	4	4	4	0	Laminin	Domain	II
MADF_DNA_bdg	PF10545.4	gi|297620628|ref|YP_003708765.1|	-	1.8	8.8	6.8	1.7	8.8	1.4	3.1	2	1	1	3	3	3	0	Alcohol	dehydrogenase	transcription	factor	Myb/SANT-like
Mnd1	PF03962.10	gi|297620628|ref|YP_003708765.1|	-	2.1	7.9	24.2	5	6.7	4.8	2.7	1	1	1	2	2	2	0	Mnd1	family
ASL_C	PF08328.6	gi|297620628|ref|YP_003708765.1|	-	2.5	7.9	12.3	0.67	9.8	1.5	3.0	2	2	1	3	3	3	0	Adenylosuccinate	lyase	C-terminal
APG6	PF04111.7	gi|297620628|ref|YP_003708765.1|	-	4.3	6.2	25.5	2.7	6.9	6.3	2.3	1	1	0	2	2	2	0	Autophagy	protein	Apg6
GAS	PF13851.1	gi|297620628|ref|YP_003708765.1|	-	5.3	6.1	31.9	1.4	8.0	9.5	2.7	1	1	0	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Med9	PF07544.8	gi|297620628|ref|YP_003708765.1|	-	6.9	6.4	13.6	0.11	12.2	2.0	3.1	2	2	1	3	3	3	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
MbeD_MobD	PF04899.7	gi|297620628|ref|YP_003708765.1|	-	7.6	6.5	11.9	12	5.8	0.1	4.5	3	2	2	5	5	5	0	MbeD/MobD	like
COG5	PF10392.4	gi|297620628|ref|YP_003708765.1|	-	7.9	6.4	8.7	2	8.3	0.4	3.0	1	1	2	3	3	3	0	Golgi	transport	complex	subunit	5
IncA	PF04156.9	gi|297620629|ref|YP_003708766.1|	-	0.00013	21.5	22.3	0.03	13.9	1.4	2.2	1	1	1	2	2	2	2	IncA	protein
ERM	PF00769.14	gi|297620629|ref|YP_003708766.1|	-	0.0087	15.6	12.9	0.21	11.0	3.9	2.2	1	1	0	2	2	2	2	Ezrin/radixin/moesin	family
Fzo_mitofusin	PF04799.8	gi|297620629|ref|YP_003708766.1|	-	0.01	15.2	6.7	0.016	14.5	2.6	2.4	1	1	0	2	2	2	0	fzo-like	conserved	region
Syntaxin-6_N	PF09177.6	gi|297620629|ref|YP_003708766.1|	-	0.013	15.8	8.3	0.31	11.4	0.1	3.4	1	1	1	3	3	3	0	Syntaxin	6,	N-terminal
HAP1_N	PF04849.8	gi|297620629|ref|YP_003708766.1|	-	0.037	12.9	15.0	0.082	11.8	10.4	1.5	1	1	0	1	1	1	0	HAP1	N-terminal	conserved	region
DUF1664	PF07889.7	gi|297620629|ref|YP_003708766.1|	-	0.039	13.7	7.4	0.46	10.2	1.0	2.9	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1664)
IIGP	PF05049.8	gi|297620629|ref|YP_003708766.1|	-	0.045	12.5	2.2	0.94	8.2	0.0	2.1	1	1	1	2	2	2	0	Interferon-inducible	GTPase	(IIGP)
MbeD_MobD	PF04899.7	gi|297620629|ref|YP_003708766.1|	-	0.055	13.3	2.8	27	4.7	0.1	4.0	2	1	1	3	3	3	0	MbeD/MobD	like
Apolipoprotein	PF01442.13	gi|297620629|ref|YP_003708766.1|	-	0.069	12.6	9.4	0.026	14.0	1.9	2.4	1	1	0	2	2	2	0	Apolipoprotein	A1/A4/E	domain
FH2	PF02181.18	gi|297620629|ref|YP_003708766.1|	-	0.077	11.8	12.1	1.1	8.0	5.1	2.6	2	1	1	3	3	3	0	Formin	Homology	2	Domain
Med30	PF11315.3	gi|297620629|ref|YP_003708766.1|	-	0.25	11.4	4.1	0.4	10.8	1.4	2.3	2	1	1	3	3	3	0	Mediator	complex	subunit	30
GAS	PF13851.1	gi|297620629|ref|YP_003708766.1|	-	0.31	10.2	17.0	2.5	7.2	0.2	2.4	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
CENP-F_leu_zip	PF10473.4	gi|297620629|ref|YP_003708766.1|	-	0.7	9.7	19.5	7.9	6.3	1.4	3.1	1	1	2	3	3	3	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Occludin_ELL	PF07303.8	gi|297620629|ref|YP_003708766.1|	-	1.1	10.0	12.5	0.79	10.4	5.9	2.7	1	1	2	3	3	3	0	Occludin	homology	domain
FlaC_arch	PF05377.6	gi|297620629|ref|YP_003708766.1|	-	1.3	8.9	12.7	11	5.9	0.0	4.9	2	2	2	4	4	4	0	Flagella	accessory	protein	C	(FlaC)
Cortex-I_coil	PF09304.5	gi|297620629|ref|YP_003708766.1|	-	1.4	8.9	13.3	0.55	10.3	3.7	2.6	3	0	0	3	3	2	0	Cortexillin	I,	coiled	coil
TMF_DNA_bd	PF12329.3	gi|297620629|ref|YP_003708766.1|	-	1.9	8.3	19.2	0.093	12.5	0.8	3.6	3	1	0	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
Snapin_Pallidin	PF14712.1	gi|297620629|ref|YP_003708766.1|	-	2.6	8.4	9.5	3	8.2	1.2	3.6	2	1	1	3	3	3	0	Snapin/Pallidin
Vps51	PF08700.6	gi|297620629|ref|YP_003708766.1|	-	4	7.3	7.4	2.2	8.1	1.5	3.1	4	1	0	4	4	4	0	Vps51/Vps67
ATG16	PF08614.6	gi|297620629|ref|YP_003708766.1|	-	5.1	6.8	12.5	3.2	7.5	0.2	2.6	1	1	2	3	3	3	0	Autophagy	protein	16	(ATG16)
V_ATPase_I	PF01496.14	gi|297620629|ref|YP_003708766.1|	-	6.7	4.4	10.1	18	2.9	7.1	1.6	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
APG6	PF04111.7	gi|297620629|ref|YP_003708766.1|	-	8.9	5.2	14.2	4.2	6.3	0.8	2.1	1	1	1	2	2	2	0	Autophagy	protein	Apg6
Prefoldin	PF02996.12	gi|297620629|ref|YP_003708766.1|	-	9	5.9	12.4	2.6	7.6	0.8	3.2	2	1	0	3	3	3	0	Prefoldin	subunit
Aminotran_4	PF01063.14	gi|297620630|ref|YP_003708767.1|	-	2.7e-27	95.7	0.0	3.3e-27	95.4	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	IV
ParD	PF09386.5	gi|297620630|ref|YP_003708767.1|	-	0.0024	17.9	0.0	0.027	14.5	0.0	2.1	2	0	0	2	2	2	1	Antitoxin	ParD
RHS_repeat	PF05593.9	gi|297620631|ref|YP_003708768.1|	-	2.3e-44	148.7	71.5	3.4e-05	23.8	0.1	23.9	17	6	8	25	25	25	17	RHS	Repeat
MORN_2	PF07661.8	gi|297620631|ref|YP_003708768.1|	-	0.072	13.1	7.6	17	5.8	0.5	6.7	4	0	0	4	4	4	0	MORN	repeat	variant
Toxin_40	PF15520.1	gi|297620632|ref|YP_003708769.1|	-	0.011	15.2	0.8	0.018	14.4	0.6	1.3	1	0	0	1	1	1	0	Putative	toxin	40
ProRS-C_1	PF09180.6	gi|297620635|ref|YP_003708772.1|	-	2.3e-17	62.6	0.0	1.1e-16	60.5	0.0	2.2	2	0	0	2	2	2	1	Prolyl-tRNA	synthetase,	C-terminal
tRNA-synt_2b	PF00587.20	gi|297620635|ref|YP_003708772.1|	-	2.6e-17	62.9	0.1	4.3e-17	62.2	0.1	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|297620635|ref|YP_003708772.1|	-	4.9e-12	45.6	0.1	9.6e-12	44.6	0.0	1.5	1	0	0	1	1	1	1	Anticodon	binding	domain
DUF2317	PF10079.4	gi|297620636|ref|YP_003708773.1|	-	0.0011	17.6	2.8	0.0012	17.5	1.9	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2317)
GrpE	PF01025.14	gi|297620636|ref|YP_003708773.1|	-	0.0053	16.3	5.6	0.0073	15.8	3.9	1.2	1	0	0	1	1	1	1	GrpE
Ste5_C	PF12194.3	gi|297620636|ref|YP_003708773.1|	-	0.0085	15.7	0.2	0.012	15.1	0.1	1.3	1	1	0	1	1	1	1	Protein	kinase	Fus3-binding
DUF2450	PF10475.4	gi|297620636|ref|YP_003708773.1|	-	0.011	14.6	4.0	0.013	14.3	2.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	N-terminal	domain	(DUF2450)
HAUS6_N	PF14661.1	gi|297620636|ref|YP_003708773.1|	-	0.017	14.4	4.0	0.02	14.2	2.7	1.1	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	6	N-terminus
V_ATPase_I	PF01496.14	gi|297620636|ref|YP_003708773.1|	-	0.032	12.1	5.8	0.037	11.9	4.0	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Glutaredoxin2_C	PF04399.8	gi|297620636|ref|YP_003708773.1|	-	0.045	13.3	5.5	0.16	11.5	1.4	2.1	1	1	0	2	2	2	0	Glutaredoxin	2,	C	terminal	domain
TipAS	PF07739.8	gi|297620636|ref|YP_003708773.1|	-	0.049	13.9	2.5	0.057	13.7	1.2	1.5	1	1	0	1	1	1	0	TipAS	antibiotic-recognition	domain
DUF342	PF03961.8	gi|297620636|ref|YP_003708773.1|	-	0.066	11.6	8.3	0.075	11.4	5.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
ACCA	PF03255.9	gi|297620636|ref|YP_003708773.1|	-	0.089	12.3	6.5	0.24	10.9	1.6	2.0	1	1	1	2	2	2	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
KLRAQ	PF10205.4	gi|297620636|ref|YP_003708773.1|	-	0.092	12.7	5.5	0.13	12.2	3.1	1.7	1	1	0	1	1	1	0	Predicted	coiled-coil	domain-containing	protein
TMF_TATA_bd	PF12325.3	gi|297620636|ref|YP_003708773.1|	-	0.11	12.2	5.2	0.15	11.7	3.6	1.3	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	TATA	binding
Uds1	PF15456.1	gi|297620636|ref|YP_003708773.1|	-	0.12	12.3	5.0	0.17	11.8	3.5	1.3	1	0	0	1	1	1	0	Up-regulated	During	Septation
Baculo_PEP_C	PF04513.7	gi|297620636|ref|YP_003708773.1|	-	0.16	11.8	2.1	0.34	10.7	1.5	1.4	1	1	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
IncA	PF04156.9	gi|297620636|ref|YP_003708773.1|	-	0.18	11.3	10.8	0.24	10.9	7.5	1.1	1	0	0	1	1	1	0	IncA	protein
TALPID3	PF15324.1	gi|297620636|ref|YP_003708773.1|	-	0.18	9.1	2.6	0.18	9.0	1.8	1.1	1	0	0	1	1	1	0	Hedgehog	signalling	target
DUF3086	PF11285.3	gi|297620636|ref|YP_003708773.1|	-	0.24	10.1	5.7	0.6	8.8	1.2	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3086)
Tropomyosin_1	PF12718.2	gi|297620636|ref|YP_003708773.1|	-	0.32	10.8	9.4	0.41	10.4	6.1	1.4	1	1	0	1	1	1	0	Tropomyosin	like
Sterile	PF03015.14	gi|297620636|ref|YP_003708773.1|	-	0.41	10.9	3.3	0.27	11.5	0.7	1.7	1	1	1	2	2	2	0	Male	sterility	protein
Tox-ODYAM1	PF15642.1	gi|297620636|ref|YP_003708773.1|	-	0.68	8.5	4.7	0.78	8.3	3.2	1.0	1	0	0	1	1	1	0	Toxin	in	Odyssella	and	Amoebophilus
DUF4404	PF14357.1	gi|297620636|ref|YP_003708773.1|	-	0.7	10.3	4.5	0.52	10.7	2.0	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4404)
DivIC	PF04977.10	gi|297620636|ref|YP_003708773.1|	-	1.1	8.7	8.3	0.35	10.4	0.5	2.3	1	1	1	2	2	2	0	Septum	formation	initiator
TMPIT	PF07851.8	gi|297620636|ref|YP_003708773.1|	-	2.2	7.2	5.5	2.7	6.9	3.8	1.1	1	0	0	1	1	1	0	TMPIT-like	protein
Prefoldin_2	PF01920.15	gi|297620636|ref|YP_003708773.1|	-	2.7	7.7	11.5	2e+02	1.7	8.4	2.2	1	1	0	1	1	1	0	Prefoldin	subunit
CENP-H	PF05837.7	gi|297620636|ref|YP_003708773.1|	-	3.7	7.7	9.3	13	5.9	6.4	1.8	1	1	0	1	1	1	0	Centromere	protein	H	(CENP-H)
DUF1910	PF08928.5	gi|297620636|ref|YP_003708773.1|	-	6	6.9	9.1	3.4	7.7	2.1	2.4	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF1910)
RasGEF	PF00617.14	gi|297620637|ref|YP_003708774.1|	-	3.5e-16	59.4	0.0	6.9e-16	58.5	0.0	1.5	1	0	0	1	1	1	1	RasGEF	domain
Methyltransf_28	PF02636.12	gi|297620638|ref|YP_003708775.1|	-	1.1e-06	28.2	0.0	1.7e-06	27.6	0.0	1.2	1	0	0	1	1	1	1	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
TPR_11	PF13414.1	gi|297620638|ref|YP_003708775.1|	-	0.00059	19.4	0.2	0.0015	18.1	0.1	1.6	1	0	0	1	1	1	1	TPR	repeat
Methyltransf_31	PF13847.1	gi|297620638|ref|YP_003708775.1|	-	0.0076	15.8	0.0	0.015	14.9	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Peptidase_M16	PF00675.15	gi|297620639|ref|YP_003708776.1|	-	2.3e-33	115.0	2.3	4e-33	114.2	0.0	2.6	3	1	0	3	3	3	1	Insulinase	(Peptidase	family	M16)
Peptidase_M16_C	PF05193.16	gi|297620639|ref|YP_003708776.1|	-	2.4e-26	92.5	5.0	5.3e-18	65.3	0.0	2.8	3	0	0	3	3	3	2	Peptidase	M16	inactive	domain
Ppx-GppA	PF02541.11	gi|297620639|ref|YP_003708776.1|	-	1.1	8.4	3.5	0.72	8.9	0.5	2.0	2	0	0	2	2	2	0	Ppx/GppA	phosphatase	family
Acyltransferase	PF01553.16	gi|297620641|ref|YP_003708778.1|	-	3.9e-14	52.2	0.0	5.8e-14	51.6	0.0	1.2	1	0	0	1	1	1	1	Acyltransferase
GPAT_N	PF14829.1	gi|297620641|ref|YP_003708778.1|	-	0.058	13.0	0.1	0.15	11.7	0.0	1.8	2	0	0	2	2	2	0	Glycerol-3-phosphate	acyltransferase	N-terminal
RNase_E_G	PF10150.4	gi|297620642|ref|YP_003708779.1|	-	1.3e-95	319.6	1.7	1.3e-95	319.6	1.2	1.7	2	0	0	2	2	2	1	Ribonuclease	E/G	family
S1	PF00575.18	gi|297620642|ref|YP_003708779.1|	-	4.1e-11	42.7	0.3	9.7e-11	41.6	0.2	1.7	1	0	0	1	1	1	1	S1	RNA	binding	domain
Syntaxin	PF00804.20	gi|297620643|ref|YP_003708780.1|	-	0.0079	16.3	2.2	0.011	15.8	1.5	1.3	1	0	0	1	1	1	1	Syntaxin
Vps53_N	PF04100.7	gi|297620643|ref|YP_003708780.1|	-	0.019	13.7	0.0	0.024	13.4	0.0	1.1	1	0	0	1	1	1	0	Vps53-like,	N-terminal
Med7	PF05983.6	gi|297620643|ref|YP_003708780.1|	-	0.054	13.2	2.6	0.079	12.7	1.8	1.2	1	0	0	1	1	1	0	MED7	protein
Rotamase	PF00639.16	gi|297620643|ref|YP_003708780.1|	-	0.061	14.0	0.1	0.094	13.4	0.1	1.3	1	0	0	1	1	1	0	PPIC-type	PPIASE	domain
DUF177	PF02620.12	gi|297620644|ref|YP_003708781.1|	-	5.4e-07	29.6	0.6	2.1e-05	24.5	0.4	2.2	1	1	0	1	1	1	1	Uncharacterized	ACR,	COG1399
Ribosomal_L32p	PF01783.18	gi|297620645|ref|YP_003708782.1|	-	1.9e-18	66.3	3.0	2.1e-18	66.2	2.1	1.0	1	0	0	1	1	1	1	Ribosomal	L32p	protein	family
Stc1	PF12898.2	gi|297620645|ref|YP_003708782.1|	-	0.0061	16.5	0.5	0.0074	16.3	0.4	1.1	1	0	0	1	1	1	1	Stc1	domain
DZR	PF12773.2	gi|297620645|ref|YP_003708782.1|	-	0.1	12.4	0.6	0.14	11.9	0.4	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.6	gi|297620645|ref|YP_003708782.1|	-	0.16	11.6	1.9	0.57	9.8	1.3	1.8	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
DNA_RNApol_7kD	PF03604.8	gi|297620645|ref|YP_003708782.1|	-	3.6	7.1	5.5	4.2	6.9	0.3	2.2	1	1	1	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
FA_synthesis	PF02504.10	gi|297620646|ref|YP_003708783.1|	-	1.1e-72	244.6	0.0	1.3e-72	244.4	0.0	1.0	1	0	0	1	1	1	1	Fatty	acid	synthesis	protein
Myosin_tail_1	PF01576.14	gi|297620647|ref|YP_003708784.1|	-	0.00051	17.9	15.3	0.00066	17.5	10.6	1.1	1	0	0	1	1	1	1	Myosin	tail
CCDC155	PF14662.1	gi|297620647|ref|YP_003708784.1|	-	0.00058	19.5	14.6	0.0017	18.0	9.8	1.8	1	1	1	2	2	2	1	Coiled-coil	region	of	CCDC155
bZIP_1	PF00170.16	gi|297620647|ref|YP_003708784.1|	-	0.0026	17.6	7.3	0.57	10.1	0.0	3.9	1	1	2	4	4	3	1	bZIP	transcription	factor
HOOK	PF05622.7	gi|297620647|ref|YP_003708784.1|	-	0.011	13.5	13.6	0.02	12.7	9.4	1.5	1	1	0	1	1	1	0	HOOK	protein
BLOC1_2	PF10046.4	gi|297620647|ref|YP_003708784.1|	-	0.012	15.6	6.7	0.11	12.6	1.9	2.4	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Reo_sigmaC	PF04582.7	gi|297620647|ref|YP_003708784.1|	-	0.013	14.7	2.3	0.039	13.1	1.7	1.6	1	1	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
DUF2353	PF09789.4	gi|297620647|ref|YP_003708784.1|	-	0.017	14.3	11.5	0.023	13.9	7.9	1.1	1	0	0	1	1	1	0	Uncharacterized	coiled-coil	protein	(DUF2353)
DUF972	PF06156.8	gi|297620647|ref|YP_003708784.1|	-	0.022	15.0	17.2	0.36	11.1	2.4	3.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
DUF1722	PF08349.6	gi|297620647|ref|YP_003708784.1|	-	0.022	14.6	2.5	0.033	14.0	0.8	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1722)
DUF932	PF06067.6	gi|297620647|ref|YP_003708784.1|	-	0.022	14.0	0.8	0.03	13.6	0.6	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF932)
Spc7	PF08317.6	gi|297620647|ref|YP_003708784.1|	-	0.024	13.3	11.2	0.0064	15.1	4.0	1.6	1	1	1	2	2	2	0	Spc7	kinetochore	protein
DUF904	PF06005.7	gi|297620647|ref|YP_003708784.1|	-	0.024	14.9	19.7	1.6	9.0	2.4	3.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF904)
DUF1875	PF08961.5	gi|297620647|ref|YP_003708784.1|	-	0.037	13.3	10.3	0.028	13.7	1.0	2.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1875)
Atg14	PF10186.4	gi|297620647|ref|YP_003708784.1|	-	0.042	12.7	12.4	0.25	10.2	8.6	1.9	1	1	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
APG6	PF04111.7	gi|297620647|ref|YP_003708784.1|	-	0.042	12.8	13.2	0.0092	15.0	6.8	1.5	1	1	1	2	2	2	0	Autophagy	protein	Apg6
TMF_TATA_bd	PF12325.3	gi|297620647|ref|YP_003708784.1|	-	0.045	13.4	11.2	0.032	13.9	2.0	2.4	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
TPR_MLP1_2	PF07926.7	gi|297620647|ref|YP_003708784.1|	-	0.048	13.4	16.6	0.037	13.7	2.6	2.6	1	1	1	2	2	2	0	TPR/MLP1/MLP2-like	protein
MbeD_MobD	PF04899.7	gi|297620647|ref|YP_003708784.1|	-	0.06	13.2	1.0	0.06	13.2	0.7	3.9	1	1	3	4	4	4	0	MbeD/MobD	like
Endotoxin_N	PF03945.9	gi|297620647|ref|YP_003708784.1|	-	0.073	12.4	4.5	0.097	12.0	2.8	1.4	1	1	0	1	1	1	0	delta	endotoxin,	N-terminal	domain
ASL_C	PF08328.6	gi|297620647|ref|YP_003708784.1|	-	0.085	12.7	1.0	0.14	11.9	0.7	1.3	1	0	0	1	1	1	0	Adenylosuccinate	lyase	C-terminal
DUF3944	PF13099.1	gi|297620647|ref|YP_003708784.1|	-	0.11	12.0	1.1	9.8	5.7	0.0	3.1	2	1	1	3	3	2	0	Domain	of	unknown	function	(DUF3944)
DUF3418	PF11898.3	gi|297620647|ref|YP_003708784.1|	-	0.11	10.9	6.3	0.13	10.6	4.4	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3418)
Filament	PF00038.16	gi|297620647|ref|YP_003708784.1|	-	0.19	11.1	14.7	0.11	11.9	3.2	2.1	1	1	1	2	2	2	0	Intermediate	filament	protein
Rabaptin	PF03528.10	gi|297620647|ref|YP_003708784.1|	-	0.22	11.4	15.3	0.21	11.5	4.4	2.7	1	1	1	2	2	2	0	Rabaptin
Occludin_ELL	PF07303.8	gi|297620647|ref|YP_003708784.1|	-	0.22	12.2	5.8	0.31	11.7	0.4	2.4	1	1	1	2	2	2	0	Occludin	homology	domain
COG2	PF06148.6	gi|297620647|ref|YP_003708784.1|	-	0.28	11.0	6.8	0.44	10.4	1.8	2.2	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
CENP-F_leu_zip	PF10473.4	gi|297620647|ref|YP_003708784.1|	-	0.31	10.8	16.3	0.35	10.7	4.9	2.3	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Exonuc_VII_L	PF02601.10	gi|297620647|ref|YP_003708784.1|	-	0.34	10.0	11.8	0.49	9.5	8.2	1.2	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
GAS	PF13851.1	gi|297620647|ref|YP_003708784.1|	-	0.48	9.5	16.8	1.4	8.1	5.2	2.3	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
NYD-SP28_assoc	PF14775.1	gi|297620647|ref|YP_003708784.1|	-	0.49	10.1	11.1	0.31	10.7	0.4	3.6	1	1	3	4	4	4	0	Sperm	tail	C-terminal	domain
CorA	PF01544.13	gi|297620647|ref|YP_003708784.1|	-	0.56	9.1	3.4	0.76	8.7	2.4	1.2	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
Sec34	PF04136.10	gi|297620647|ref|YP_003708784.1|	-	0.64	9.7	7.3	1.1	8.9	1.2	2.3	1	1	1	2	2	2	0	Sec34-like	family
V_ATPase_I	PF01496.14	gi|297620647|ref|YP_003708784.1|	-	0.65	7.7	7.1	0.81	7.4	4.9	1.3	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
IncA	PF04156.9	gi|297620647|ref|YP_003708784.1|	-	0.8	9.2	19.9	0.1	12.1	6.3	2.1	1	1	1	2	2	2	0	IncA	protein
Mod_r	PF07200.8	gi|297620647|ref|YP_003708784.1|	-	0.84	9.5	16.0	2.4	8.0	6.9	2.5	1	1	2	3	3	3	0	Modifier	of	rudimentary	(Mod(r))	protein
NPV_P10	PF05531.7	gi|297620647|ref|YP_003708784.1|	-	0.84	9.9	3.5	5.5	7.3	0.6	2.9	1	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
DUF342	PF03961.8	gi|297620647|ref|YP_003708784.1|	-	0.9	7.8	6.5	0.67	8.3	3.4	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
HALZ	PF02183.13	gi|297620647|ref|YP_003708784.1|	-	0.98	9.1	11.4	1.9	8.2	1.3	4.2	2	1	1	4	4	4	0	Homeobox	associated	leucine	zipper
WXG100	PF06013.7	gi|297620647|ref|YP_003708784.1|	-	1	9.4	4.3	15	5.6	0.0	3.3	1	1	2	3	3	3	0	Proteins	of	100	residues	with	WXG
ATG16	PF08614.6	gi|297620647|ref|YP_003708784.1|	-	1.3	8.8	16.4	0.34	10.7	6.2	2.4	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
Syntaxin-6_N	PF09177.6	gi|297620647|ref|YP_003708784.1|	-	1.9	8.9	8.4	3.2	8.1	1.1	2.5	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
ERM	PF00769.14	gi|297620647|ref|YP_003708784.1|	-	2.6	7.5	14.5	20	4.6	10.1	2.0	1	1	0	1	1	1	0	Ezrin/radixin/moesin	family
DUF3450	PF11932.3	gi|297620647|ref|YP_003708784.1|	-	4.1	6.6	12.5	2.1	7.5	1.7	2.3	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3450)
DivIVA	PF05103.8	gi|297620647|ref|YP_003708784.1|	-	4.7	7.2	10.5	9	6.3	0.6	3.3	1	1	1	3	3	3	0	DivIVA	protein
Seryl_tRNA_N	PF02403.17	gi|297620647|ref|YP_003708784.1|	-	4.7	7.2	8.1	2.1	8.4	0.6	2.7	1	1	2	3	3	3	0	Seryl-tRNA	synthetase	N-terminal	domain
DUF964	PF06133.6	gi|297620647|ref|YP_003708784.1|	-	4.9	7.2	9.2	0.79	9.7	2.1	2.6	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF964)
DivIC	PF04977.10	gi|297620647|ref|YP_003708784.1|	-	5.5	6.5	13.9	6.8	6.2	1.2	4.1	1	1	4	5	5	5	0	Septum	formation	initiator
ADIP	PF11559.3	gi|297620647|ref|YP_003708784.1|	-	6.1	6.7	18.8	12	5.8	6.4	2.5	1	1	1	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
DUF4200	PF13863.1	gi|297620647|ref|YP_003708784.1|	-	6.3	6.7	15.6	0.65	9.9	3.8	3.0	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
UPF0449	PF15136.1	gi|297620647|ref|YP_003708784.1|	-	6.4	7.0	9.8	26	5.1	1.0	3.5	1	1	4	5	5	5	0	Uncharacterised	protein	family	UPF0449
DUF2347	PF09804.4	gi|297620647|ref|YP_003708784.1|	-	6.4	5.9	10.0	1.6	7.9	1.8	2.1	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2347)
DASH_Hsk3	PF08227.6	gi|297620647|ref|YP_003708784.1|	-	8.3	6.6	10.9	2.8	8.2	0.9	3.6	3	1	1	4	4	3	0	DASH	complex	subunit	Hsk3	like
AAA_19	PF13245.1	gi|297620648|ref|YP_003708785.1|	-	1.5e-12	47.1	0.0	3.5e-12	45.8	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_11	PF13086.1	gi|297620648|ref|YP_003708785.1|	-	2e-12	47.1	0.3	6.6e-12	45.5	0.1	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_30	PF13604.1	gi|297620648|ref|YP_003708785.1|	-	3e-07	30.2	0.6	4.7e-07	29.5	0.4	1.2	1	0	0	1	1	1	1	AAA	domain
DUF2075	PF09848.4	gi|297620648|ref|YP_003708785.1|	-	7.6e-05	21.8	0.0	0.00012	21.2	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
UvrD-helicase	PF00580.16	gi|297620648|ref|YP_003708785.1|	-	0.0045	16.3	0.3	0.0063	15.8	0.2	1.2	1	0	0	1	1	1	1	UvrD/REP	helicase	N-terminal	domain
PhoH	PF02562.11	gi|297620648|ref|YP_003708785.1|	-	0.0072	15.5	0.3	0.013	14.7	0.2	1.4	1	0	0	1	1	1	1	PhoH-like	protein
AAA_25	PF13481.1	gi|297620648|ref|YP_003708785.1|	-	0.009	15.4	0.0	0.015	14.7	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|297620648|ref|YP_003708785.1|	-	0.017	15.2	0.0	0.044	13.9	0.0	1.7	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Viral_helicase1	PF01443.13	gi|297620648|ref|YP_003708785.1|	-	0.026	14.0	0.0	0.04	13.4	0.0	1.2	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
cobW	PF02492.14	gi|297620648|ref|YP_003708785.1|	-	0.035	13.5	0.0	0.054	12.9	0.0	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
DEAD	PF00270.24	gi|297620648|ref|YP_003708785.1|	-	0.035	13.6	0.1	0.077	12.4	0.0	1.5	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
Herpes_ori_bp	PF02399.10	gi|297620648|ref|YP_003708785.1|	-	0.037	12.0	0.0	0.05	11.5	0.0	1.1	1	0	0	1	1	1	0	Origin	of	replication	binding	protein
DUF258	PF03193.11	gi|297620648|ref|YP_003708785.1|	-	0.044	12.9	0.1	0.073	12.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
DnaB_C	PF03796.10	gi|297620648|ref|YP_003708785.1|	-	0.047	12.5	0.0	0.074	11.9	0.0	1.3	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
AAA_5	PF07728.9	gi|297620648|ref|YP_003708785.1|	-	0.069	12.8	0.0	0.19	11.4	0.0	1.7	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
TrwB_AAD_bind	PF10412.4	gi|297620648|ref|YP_003708785.1|	-	0.089	11.4	0.0	0.53	8.8	0.0	1.9	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ResIII	PF04851.10	gi|297620648|ref|YP_003708785.1|	-	0.13	12.0	0.2	0.21	11.4	0.1	1.3	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
Pectate_lyase_2	PF06917.7	gi|297620649|ref|YP_003708786.1|	-	0.035	12.3	0.0	0.044	12.0	0.0	1.1	1	0	0	1	1	1	0	Periplasmic	pectate	lyase
DUF374	PF04028.8	gi|297620650|ref|YP_003708787.1|	-	2e-13	49.3	0.0	3.2e-13	48.6	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF374)
LpxB	PF02684.10	gi|297620651|ref|YP_003708788.1|	-	8.4e-103	343.8	0.1	9.9e-103	343.6	0.1	1.0	1	0	0	1	1	1	1	Lipid-A-disaccharide	synthetase
Peripla_BP_6	PF13458.1	gi|297620651|ref|YP_003708788.1|	-	0.071	12.4	0.0	0.095	12.0	0.0	1.2	1	0	0	1	1	1	0	Periplasmic	binding	protein
Glycos_transf_2	PF00535.21	gi|297620652|ref|YP_003708789.1|	-	1.1e-26	93.5	0.2	1.7e-26	92.9	0.0	1.4	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|297620652|ref|YP_003708789.1|	-	8.7e-09	35.5	0.0	1.4e-08	34.8	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|297620652|ref|YP_003708789.1|	-	0.14	12.5	0.0	0.41	10.9	0.0	1.7	1	1	0	1	1	1	0	Glycosyl	transferase	family	2
Abhydrolase_5	PF12695.2	gi|297620653|ref|YP_003708790.1|	-	4e-06	26.6	0.0	5.2e-06	26.2	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.16	gi|297620653|ref|YP_003708790.1|	-	0.0001	21.5	0.0	0.0016	17.7	0.0	2.1	1	1	0	1	1	1	1	Prolyl	oligopeptidase	family
BAAT_C	PF08840.6	gi|297620653|ref|YP_003708790.1|	-	0.00012	21.8	0.0	0.00017	21.3	0.0	1.2	1	0	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Abhydrolase_2	PF02230.11	gi|297620653|ref|YP_003708790.1|	-	0.0017	17.8	0.0	0.0027	17.2	0.0	1.2	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
Esterase	PF00756.15	gi|297620653|ref|YP_003708790.1|	-	0.0037	16.7	0.0	0.0048	16.3	0.0	1.2	1	0	0	1	1	1	1	Putative	esterase
DLH	PF01738.13	gi|297620653|ref|YP_003708790.1|	-	0.0045	16.2	0.0	0.0064	15.8	0.0	1.2	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_3	PF07859.8	gi|297620653|ref|YP_003708790.1|	-	0.0053	16.3	0.0	0.0075	15.8	0.0	1.2	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
AXE1	PF05448.7	gi|297620653|ref|YP_003708790.1|	-	0.026	13.0	0.0	0.039	12.4	0.0	1.2	1	0	0	1	1	1	0	Acetyl	xylan	esterase	(AXE1)
Abhydrolase_6	PF12697.2	gi|297620653|ref|YP_003708790.1|	-	0.063	13.1	0.0	0.1	12.4	0.0	1.4	1	1	0	1	1	1	0	Alpha/beta	hydrolase	family
PolyA_pol	PF01743.15	gi|297620654|ref|YP_003708791.1|	-	4.7e-35	120.5	0.0	1.2e-34	119.2	0.0	1.7	1	0	0	1	1	1	1	Poly	A	polymerase	head	domain
PolyA_pol_RNAbd	PF12627.2	gi|297620654|ref|YP_003708791.1|	-	3.1e-16	58.6	1.2	6.9e-16	57.5	0.9	1.6	1	0	0	1	1	1	1	Probable	RNA	and	SrmB-	binding	site	of	polymerase	A
PolyA_pol_arg_C	PF12626.2	gi|297620654|ref|YP_003708791.1|	-	2.3e-05	24.0	0.8	0.00035	20.2	0.0	2.8	3	0	0	3	3	3	1	Polymerase	A	arginine-rich	C-terminus
Acetyltransf_10	PF13673.1	gi|297620655|ref|YP_003708792.1|	-	1.2e-13	51.1	0.0	1.5e-13	50.8	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|297620655|ref|YP_003708792.1|	-	8.7e-13	48.4	0.1	2.2e-12	47.1	0.1	1.7	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|297620655|ref|YP_003708792.1|	-	1.4e-10	41.0	0.0	2e-10	40.5	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
FR47	PF08445.5	gi|297620655|ref|YP_003708792.1|	-	1.4e-07	31.1	0.0	7.1e-07	28.9	0.0	1.9	1	1	1	2	2	2	1	FR47-like	protein
Acetyltransf_7	PF13508.1	gi|297620655|ref|YP_003708792.1|	-	1.6e-06	28.1	0.1	2.5e-06	27.5	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|297620655|ref|YP_003708792.1|	-	2.3e-06	27.4	0.0	3.7e-06	26.7	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|297620655|ref|YP_003708792.1|	-	4.4e-06	26.8	0.3	7.8e-06	26.1	0.2	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|297620655|ref|YP_003708792.1|	-	0.0048	16.7	0.0	0.0063	16.4	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|297620655|ref|YP_003708792.1|	-	0.0098	15.7	0.0	0.016	15.0	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
DUF3749	PF12568.3	gi|297620655|ref|YP_003708792.1|	-	0.057	13.0	0.3	0.21	11.1	0.2	1.8	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
GlutR_dimer	PF00745.15	gi|297620655|ref|YP_003708792.1|	-	0.11	12.4	0.1	0.24	11.3	0.0	1.6	2	0	0	2	2	1	0	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
PGM_PMM_I	PF02878.11	gi|297620656|ref|YP_003708793.1|	-	3.3e-46	156.1	0.0	7.5e-46	155.0	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_III	PF02880.11	gi|297620656|ref|YP_003708793.1|	-	4.8e-33	113.5	0.3	9.8e-33	112.5	0.2	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_II	PF02879.11	gi|297620656|ref|YP_003708793.1|	-	2.3e-16	60.0	0.2	6.3e-16	58.5	0.1	1.8	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_IV	PF00408.15	gi|297620656|ref|YP_003708793.1|	-	1.2e-11	44.3	0.5	8.3e-11	41.7	0.1	2.5	3	0	0	3	3	3	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
Peptidase_U32	PF01136.14	gi|297620656|ref|YP_003708793.1|	-	0.11	11.3	0.1	16	4.2	0.0	2.6	3	0	0	3	3	3	0	Peptidase	family	U32
SIS	PF01380.17	gi|297620657|ref|YP_003708794.1|	-	5.5e-49	165.1	0.0	9.6e-29	99.6	0.0	2.4	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.1	gi|297620657|ref|YP_003708794.1|	-	8.3e-22	77.5	0.1	1.7e-21	76.5	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|297620657|ref|YP_003708794.1|	-	5.4e-20	71.4	1.0	1.9e-13	49.9	0.1	2.6	1	1	1	2	2	2	2	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|297620657|ref|YP_003708794.1|	-	1.1e-16	60.7	0.0	2.4e-16	59.6	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|297620657|ref|YP_003708794.1|	-	0.00012	20.8	0.0	0.0002	20.1	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
SIS_2	PF13580.1	gi|297620657|ref|YP_003708794.1|	-	0.1	12.2	0.6	0.23	11.1	0.0	1.9	2	0	0	2	2	2	0	SIS	domain
Trp_Tyr_perm	PF03222.8	gi|297620658|ref|YP_003708795.1|	-	2.1e-88	296.8	28.6	2.4e-88	296.6	19.9	1.0	1	0	0	1	1	1	1	Tryptophan/tyrosine	permease	family
Virulence_RhuM	PF13310.1	gi|297620659|ref|YP_003708796.1|	-	1.7e-75	253.4	1.8	2.1e-75	253.1	1.3	1.1	1	0	0	1	1	1	1	Virulence	protein	RhuM	family
AAA_13	PF13166.1	gi|297620660|ref|YP_003708797.1|	-	1.1e-20	73.7	0.2	1.3e-20	73.5	0.1	1.0	1	0	0	1	1	1	1	AAA	domain
SbcD_C	PF12320.3	gi|297620661|ref|YP_003708798.1|	-	6.8e-19	67.7	0.1	1.6e-18	66.6	0.1	1.7	1	0	0	1	1	1	1	Type	5	capsule	protein	repressor	C-terminal	domain
Metallophos	PF00149.23	gi|297620661|ref|YP_003708798.1|	-	9.7e-11	41.4	0.0	1.3e-10	40.9	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|297620661|ref|YP_003708798.1|	-	5.5e-10	39.3	0.0	2.3e-09	37.2	0.0	1.9	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
FBPase_2	PF06874.6	gi|297620661|ref|YP_003708798.1|	-	0.036	12.1	0.0	0.053	11.5	0.0	1.2	1	0	0	1	1	1	0	Firmicute	fructose-1,6-bisphosphatase
AAA_23	PF13476.1	gi|297620662|ref|YP_003708799.1|	-	7.5e-27	94.9	0.0	7.5e-27	94.9	0.0	6.5	1	1	2	3	3	1	1	AAA	domain
SbcCD_C	PF13558.1	gi|297620662|ref|YP_003708799.1|	-	3e-14	52.7	0.1	7.7e-14	51.3	0.1	1.7	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_29	PF13555.1	gi|297620662|ref|YP_003708799.1|	-	1.4e-07	30.8	0.0	3.3e-07	29.7	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
CENP-F_leu_zip	PF10473.4	gi|297620662|ref|YP_003708799.1|	-	6.7e-07	29.2	3.3	6.7e-07	29.2	2.3	7.6	5	3	0	5	5	4	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
AAA_19	PF13245.1	gi|297620662|ref|YP_003708799.1|	-	0.00084	19.0	0.1	0.0024	17.5	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
SMC_N	PF02463.14	gi|297620662|ref|YP_003708799.1|	-	0.0011	18.1	19.1	0.012	14.8	13.2	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.1	gi|297620662|ref|YP_003708799.1|	-	0.0061	16.5	1.0	0.016	15.2	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.22	gi|297620662|ref|YP_003708799.1|	-	0.0094	16.2	0.0	0.0094	16.2	0.0	4.3	4	2	0	4	4	4	1	ABC	transporter
AAA_25	PF13481.1	gi|297620662|ref|YP_003708799.1|	-	0.011	15.1	4.7	0.061	12.7	0.0	3.1	3	0	0	3	3	3	0	AAA	domain
AAA_22	PF13401.1	gi|297620662|ref|YP_003708799.1|	-	0.015	15.3	5.0	0.026	14.6	0.0	3.8	3	1	1	4	4	4	0	AAA	domain
AAA_17	PF13207.1	gi|297620662|ref|YP_003708799.1|	-	0.027	15.2	0.0	0.027	15.2	0.0	4.9	3	2	1	4	4	4	0	AAA	domain
AAA_18	PF13238.1	gi|297620662|ref|YP_003708799.1|	-	0.077	13.3	0.0	0.077	13.3	0.0	4.5	4	1	0	4	4	4	0	AAA	domain
SRP54	PF00448.17	gi|297620664|ref|YP_003708801.1|	-	1.3e-76	256.4	0.5	1.9e-76	255.9	0.4	1.2	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.14	gi|297620664|ref|YP_003708801.1|	-	2.7e-09	37.0	1.8	7.4e-09	35.5	1.0	2.0	1	1	1	2	2	2	1	SRP54-type	protein,	helical	bundle	domain
AAA_22	PF13401.1	gi|297620664|ref|YP_003708801.1|	-	1.3e-06	28.5	0.0	4.4e-06	26.8	0.0	1.8	2	0	0	2	2	1	1	AAA	domain
AAA_30	PF13604.1	gi|297620664|ref|YP_003708801.1|	-	1.6e-06	27.8	2.1	3e-06	26.9	1.5	1.4	1	0	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|297620664|ref|YP_003708801.1|	-	6.4e-06	25.4	0.2	9.2e-06	24.8	0.1	1.2	1	0	0	1	1	1	1	Zeta	toxin
AAA_16	PF13191.1	gi|297620664|ref|YP_003708801.1|	-	7.6e-06	26.0	0.1	1.7e-05	24.8	0.0	1.6	2	0	0	2	2	2	1	AAA	ATPase	domain
ArgK	PF03308.11	gi|297620664|ref|YP_003708801.1|	-	2.2e-05	23.3	0.2	0.0022	16.8	0.0	2.2	2	0	0	2	2	2	1	ArgK	protein
CbiA	PF01656.18	gi|297620664|ref|YP_003708801.1|	-	2.7e-05	23.6	2.4	0.00015	21.2	1.7	2.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_19	PF13245.1	gi|297620664|ref|YP_003708801.1|	-	7.3e-05	22.4	2.4	0.00014	21.4	1.3	1.8	1	1	0	1	1	1	1	Part	of	AAA	domain
AAA_33	PF13671.1	gi|297620664|ref|YP_003708801.1|	-	0.00062	19.6	0.1	0.001	18.9	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|297620664|ref|YP_003708801.1|	-	0.00081	19.1	2.7	0.011	15.3	1.9	2.6	1	1	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|297620664|ref|YP_003708801.1|	-	0.00084	20.1	0.4	0.0019	19.0	0.1	1.8	2	1	0	2	2	1	1	AAA	domain
DUF2075	PF09848.4	gi|297620664|ref|YP_003708801.1|	-	0.0014	17.6	0.0	0.002	17.1	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA	PF00004.24	gi|297620664|ref|YP_003708801.1|	-	0.0015	18.7	0.2	0.0047	17.1	0.1	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.22	gi|297620664|ref|YP_003708801.1|	-	0.0015	18.7	0.0	0.0054	17.0	0.0	1.8	1	1	1	2	2	2	1	ABC	transporter
Thymidylate_kin	PF02223.12	gi|297620664|ref|YP_003708801.1|	-	0.0023	17.3	3.7	0.012	14.9	0.1	2.9	3	1	1	4	4	3	1	Thymidylate	kinase
LpxK	PF02606.9	gi|297620664|ref|YP_003708801.1|	-	0.003	16.5	0.0	0.0056	15.6	0.0	1.4	1	0	0	1	1	1	1	Tetraacyldisaccharide-1-P	4'-kinase
AAA_24	PF13479.1	gi|297620664|ref|YP_003708801.1|	-	0.004	16.7	0.1	0.01	15.3	0.1	1.6	2	0	0	2	2	2	1	AAA	domain
TK	PF00265.13	gi|297620664|ref|YP_003708801.1|	-	0.0046	16.5	0.0	0.0084	15.6	0.0	1.4	1	0	0	1	1	1	1	Thymidine	kinase
AAA_10	PF12846.2	gi|297620664|ref|YP_003708801.1|	-	0.0068	15.8	0.6	0.018	14.5	0.1	2.1	2	1	0	2	2	2	1	AAA-like	domain
ArsA_ATPase	PF02374.10	gi|297620664|ref|YP_003708801.1|	-	0.0098	14.9	0.6	0.032	13.2	0.4	1.9	1	1	1	2	2	2	1	Anion-transporting	ATPase
cobW	PF02492.14	gi|297620664|ref|YP_003708801.1|	-	0.01	15.2	0.3	0.031	13.6	0.2	1.8	1	1	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
KaiC	PF06745.8	gi|297620664|ref|YP_003708801.1|	-	0.014	14.5	0.3	0.2	10.7	0.2	2.2	1	1	0	1	1	1	0	KaiC
AAA_14	PF13173.1	gi|297620664|ref|YP_003708801.1|	-	0.015	15.1	0.0	0.042	13.7	0.0	1.9	2	1	0	2	2	1	0	AAA	domain
Diphthamide_syn	PF01866.12	gi|297620664|ref|YP_003708801.1|	-	0.023	13.9	0.2	0.049	12.8	0.1	1.5	2	0	0	2	2	2	0	Putative	diphthamide	synthesis	protein
FtsK_SpoIIIE	PF01580.13	gi|297620664|ref|YP_003708801.1|	-	0.027	13.9	0.1	0.045	13.2	0.0	1.4	1	1	0	1	1	1	0	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|297620664|ref|YP_003708801.1|	-	0.027	13.0	0.1	0.16	10.5	0.0	2.0	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AIG1	PF04548.11	gi|297620664|ref|YP_003708801.1|	-	0.029	13.4	0.5	2.2	7.3	0.0	2.4	2	0	0	2	2	2	0	AIG1	family
NB-ARC	PF00931.17	gi|297620664|ref|YP_003708801.1|	-	0.034	13.0	0.0	0.078	11.8	0.0	1.7	1	1	0	1	1	1	0	NB-ARC	domain
Arch_ATPase	PF01637.13	gi|297620664|ref|YP_003708801.1|	-	0.042	13.5	0.0	0.11	12.1	0.0	1.8	1	1	1	2	2	2	0	Archaeal	ATPase
KTI12	PF08433.5	gi|297620664|ref|YP_003708801.1|	-	0.045	12.9	0.0	0.22	10.6	0.0	2.0	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
NACHT	PF05729.7	gi|297620664|ref|YP_003708801.1|	-	0.056	13.1	0.4	0.14	11.7	0.1	1.8	2	0	0	2	2	2	0	NACHT	domain
NTPase_1	PF03266.10	gi|297620664|ref|YP_003708801.1|	-	0.079	12.6	0.5	1.3	8.6	0.4	2.3	1	1	0	1	1	1	0	NTPase
AAA_5	PF07728.9	gi|297620664|ref|YP_003708801.1|	-	0.086	12.5	0.4	0.25	11.0	0.1	2.0	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_28	PF13521.1	gi|297620664|ref|YP_003708801.1|	-	0.13	12.2	0.4	0.3	11.0	0.2	1.7	1	1	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|297620664|ref|YP_003708801.1|	-	0.14	11.6	0.2	0.32	10.5	0.1	1.7	1	1	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
AAA_25	PF13481.1	gi|297620664|ref|YP_003708801.1|	-	0.19	11.1	1.7	1.1	8.5	1.2	2.1	1	1	0	1	1	1	0	AAA	domain
DUF87	PF01935.12	gi|297620664|ref|YP_003708801.1|	-	1.9	8.2	4.9	2.2	8.0	0.4	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
ATP-grasp_2	PF08442.5	gi|297620665|ref|YP_003708802.1|	-	1.6e-68	230.0	0.2	2.4e-68	229.5	0.2	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Ligase_CoA	PF00549.14	gi|297620665|ref|YP_003708802.1|	-	5.9e-24	84.4	1.6	1.1e-23	83.4	1.1	1.5	1	0	0	1	1	1	1	CoA-ligase
ATP-grasp_5	PF13549.1	gi|297620665|ref|YP_003708802.1|	-	1.8e-09	37.1	1.1	1.9e-08	33.7	0.8	2.2	1	1	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|297620665|ref|YP_003708802.1|	-	3.2e-05	23.5	0.1	5.7e-05	22.7	0.1	1.4	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_4	PF13535.1	gi|297620665|ref|YP_003708802.1|	-	0.00011	22.0	0.0	0.00018	21.2	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
SDH_alpha	PF03313.10	gi|297620665|ref|YP_003708802.1|	-	0.0033	16.5	1.4	0.0052	15.8	0.4	1.7	2	0	0	2	2	2	1	Serine	dehydratase	alpha	chain
ATP-grasp	PF02222.17	gi|297620665|ref|YP_003708802.1|	-	0.0061	15.9	0.0	0.011	15.0	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|297620665|ref|YP_003708802.1|	-	0.05	12.3	0.0	0.078	11.7	0.0	1.2	1	0	0	1	1	1	0	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
CoA_binding	PF02629.14	gi|297620666|ref|YP_003708803.1|	-	1.3e-28	99.3	0.7	5.2e-28	97.4	0.0	2.2	3	0	0	3	3	3	1	CoA	binding	domain
Ligase_CoA	PF00549.14	gi|297620666|ref|YP_003708803.1|	-	5.9e-19	68.1	0.1	1e-18	67.3	0.0	1.4	1	0	0	1	1	1	1	CoA-ligase
Succ_CoA_lig	PF13607.1	gi|297620666|ref|YP_003708803.1|	-	4.9e-10	39.1	0.0	1.1e-09	37.9	0.0	1.6	2	0	0	2	2	2	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|297620666|ref|YP_003708803.1|	-	6e-05	23.1	0.0	0.00012	22.2	0.0	1.5	1	0	0	1	1	1	1	CoA	binding	domain
Peptidase_M50	PF02163.17	gi|297620667|ref|YP_003708804.1|	-	3.6e-20	71.7	16.2	1.6e-15	56.5	7.9	2.4	1	1	1	2	2	2	2	Peptidase	family	M50
TPR_16	PF13432.1	gi|297620667|ref|YP_003708804.1|	-	0.00019	22.0	1.8	0.036	14.7	0.1	2.8	1	1	1	2	2	2	2	Tetratricopeptide	repeat
Peptidase_M50B	PF13398.1	gi|297620667|ref|YP_003708804.1|	-	0.0012	18.2	16.8	0.0095	15.3	11.8	2.3	1	1	0	1	1	1	1	Peptidase	M50B-like
TPR_14	PF13428.1	gi|297620667|ref|YP_003708804.1|	-	0.0018	18.7	2.8	19	6.2	0.1	3.8	1	1	2	3	3	3	1	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297620667|ref|YP_003708804.1|	-	0.0023	18.0	0.2	0.0081	16.2	0.1	1.9	1	1	0	1	1	1	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_19	PF14559.1	gi|297620667|ref|YP_003708804.1|	-	0.14	12.5	4.7	1.1	9.6	0.1	2.7	3	0	0	3	3	3	0	Tetratricopeptide	repeat
YukC	PF10140.4	gi|297620669|ref|YP_003708806.1|	-	0.095	11.2	0.1	0.16	10.5	0.1	1.2	1	0	0	1	1	1	0	WXG100	protein	secretion	system	(Wss),	protein	YukC
Pyr_redox_2	PF07992.9	gi|297620671|ref|YP_003708808.1|	-	6e-26	91.5	0.0	2.7e-25	89.4	0.0	2.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|297620671|ref|YP_003708808.1|	-	1.8e-17	63.5	5.6	1.5e-11	44.5	1.0	3.1	2	2	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|297620671|ref|YP_003708808.1|	-	5.1e-13	48.6	1.7	0.00084	18.3	0.0	3.9	4	0	0	4	4	4	3	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|297620671|ref|YP_003708808.1|	-	6.5e-10	39.4	0.1	0.00068	19.7	0.0	3.1	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|297620671|ref|YP_003708808.1|	-	3.8e-08	32.6	3.9	0.019	13.8	0.1	3.7	3	1	1	4	4	4	2	Glucose	inhibited	division	protein	A
NAD_binding_9	PF13454.1	gi|297620671|ref|YP_003708808.1|	-	1e-05	25.3	2.2	0.32	10.7	0.0	3.7	4	0	0	4	4	4	2	FAD-NAD(P)-binding
NAD_binding_8	PF13450.1	gi|297620671|ref|YP_003708808.1|	-	3.9e-05	23.5	0.2	0.00091	19.1	0.0	2.5	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|297620671|ref|YP_003708808.1|	-	4.2e-05	22.2	5.4	0.061	11.7	0.0	4.0	3	1	1	4	4	4	2	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|297620671|ref|YP_003708808.1|	-	0.00019	20.6	4.6	0.0015	17.6	0.0	2.9	3	1	0	3	3	3	1	FAD	binding	domain
Thi4	PF01946.12	gi|297620671|ref|YP_003708808.1|	-	0.0015	17.6	0.1	0.22	10.6	0.0	2.8	3	0	0	3	3	3	1	Thi4	family
FAD_binding_2	PF00890.19	gi|297620671|ref|YP_003708808.1|	-	0.0029	16.5	1.6	0.005	15.7	0.0	2.3	3	0	0	3	3	3	1	FAD	binding	domain
Amino_oxidase	PF01593.19	gi|297620671|ref|YP_003708808.1|	-	0.004	16.2	0.0	0.15	11.1	0.0	2.2	2	0	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
Shikimate_DH	PF01488.15	gi|297620671|ref|YP_003708808.1|	-	0.0055	16.8	0.4	0.14	12.3	0.1	3.0	2	1	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_7	PF13241.1	gi|297620671|ref|YP_003708808.1|	-	0.0069	16.6	0.1	0.19	12.0	0.0	2.6	2	0	0	2	2	2	1	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|297620671|ref|YP_003708808.1|	-	0.0085	16.0	0.5	0.81	9.6	0.0	3.2	3	0	0	3	3	3	1	TrkA-N	domain
Lycopene_cycl	PF05834.7	gi|297620671|ref|YP_003708808.1|	-	0.025	13.5	0.2	2.2	7.0	0.0	3.1	4	0	0	4	4	4	0	Lycopene	cyclase	protein
FAD_oxidored	PF12831.2	gi|297620671|ref|YP_003708808.1|	-	0.67	8.9	3.4	1.8	7.5	0.0	2.5	2	1	0	2	2	2	0	FAD	dependent	oxidoreductase
PDZ_2	PF13180.1	gi|297620673|ref|YP_003708810.1|	-	5.7e-32	109.4	4.0	1.8e-20	72.5	0.1	3.0	3	0	0	3	3	3	2	PDZ	domain
Trypsin_2	PF13365.1	gi|297620673|ref|YP_003708810.1|	-	1e-22	80.3	0.2	1.8e-22	79.5	0.1	1.4	1	0	0	1	1	1	1	Trypsin-like	peptidase	domain
PDZ	PF00595.19	gi|297620673|ref|YP_003708810.1|	-	1.8e-22	79.2	3.3	2.3e-12	46.8	0.1	2.7	2	0	0	2	2	2	2	PDZ	domain	(Also	known	as	DHR	or	GLGF)
Trypsin	PF00089.21	gi|297620673|ref|YP_003708810.1|	-	1.3e-15	57.6	0.0	2.4e-15	56.7	0.0	1.4	1	0	0	1	1	1	1	Trypsin
Tricorn_PDZ	PF14685.1	gi|297620673|ref|YP_003708810.1|	-	2.3e-07	30.4	0.1	0.0097	15.6	0.0	2.7	2	0	0	2	2	2	2	Tricorn	protease	PDZ	domain
PDZ_1	PF12812.2	gi|297620673|ref|YP_003708810.1|	-	3.1e-05	23.7	0.1	0.00064	19.5	0.0	2.6	2	0	0	2	2	2	1	PDZ-like	domain
Peptidase_S46	PF10459.4	gi|297620673|ref|YP_003708810.1|	-	0.00025	19.6	0.3	0.29	9.5	0.0	2.1	2	0	0	2	2	2	2	Peptidase	S46
GRASP55_65	PF04495.9	gi|297620673|ref|YP_003708810.1|	-	0.0007	19.6	0.1	0.77	9.7	0.0	2.7	1	1	0	2	2	2	2	GRASP55/65	PDZ-like	domain
Peptidase_S29	PF02907.10	gi|297620673|ref|YP_003708810.1|	-	0.011	15.2	0.1	0.024	14.1	0.0	1.5	1	0	0	1	1	1	0	Hepatitis	C	virus	NS3	protease
DUF4222	PF13973.1	gi|297620673|ref|YP_003708810.1|	-	0.082	12.3	0.0	0.29	10.5	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4222)
Peptidase_M20	PF01546.23	gi|297620674|ref|YP_003708811.1|	-	5.4e-29	101.0	0.0	7.1e-29	100.6	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|297620674|ref|YP_003708811.1|	-	6.3e-26	90.3	0.0	1.1e-25	89.4	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
DHFR_2	PF06442.6	gi|297620674|ref|YP_003708811.1|	-	0.019	14.5	0.0	0.038	13.6	0.0	1.4	1	0	0	1	1	1	0	R67	dihydrofolate	reductase
Peptidase_M42	PF05343.9	gi|297620674|ref|YP_003708811.1|	-	0.13	10.9	0.0	0.77	8.4	0.0	1.9	2	0	0	2	2	2	0	M42	glutamyl	aminopeptidase
Peptidase_M48	PF01435.13	gi|297620675|ref|YP_003708812.1|	-	3.9e-14	52.7	0.0	6.3e-14	52.0	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M48
DUF2201_N	PF13203.1	gi|297620675|ref|YP_003708812.1|	-	0.003	16.7	0.1	0.0044	16.2	0.1	1.1	1	0	0	1	1	1	1	Putative	metallopeptidase	domain
Peptidase_M56	PF05569.6	gi|297620675|ref|YP_003708812.1|	-	0.016	14.2	0.4	0.016	14.2	0.3	2.1	2	0	0	2	2	2	0	BlaR1	peptidase	M56
SDF	PF00375.13	gi|297620676|ref|YP_003708813.1|	-	1e-108	363.6	31.8	1.1e-108	363.4	22.1	1.0	1	0	0	1	1	1	1	Sodium:dicarboxylate	symporter	family
Methyltransf_9	PF08003.6	gi|297620676|ref|YP_003708813.1|	-	0.072	11.7	0.0	0.11	11.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1698)
Abhydrolase_2	PF02230.11	gi|297620677|ref|YP_003708814.1|	-	0.0043	16.5	0.0	0.0073	15.7	0.0	1.3	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
Abhydrolase_5	PF12695.2	gi|297620677|ref|YP_003708814.1|	-	0.084	12.6	0.0	0.11	12.2	0.0	1.2	1	0	0	1	1	1	0	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|297620677|ref|YP_003708814.1|	-	0.11	12.0	0.1	0.22	11.0	0.1	1.4	1	1	0	1	1	1	0	alpha/beta	hydrolase	fold
Glyco_transf_5	PF08323.6	gi|297620678|ref|YP_003708815.1|	-	2.3e-33	115.7	0.0	5.6e-33	114.4	0.0	1.7	1	0	0	1	1	1	1	Starch	synthase	catalytic	domain
Alpha-amylase	PF00128.19	gi|297620678|ref|YP_003708815.1|	-	1.2e-16	61.0	0.4	3.5e-14	52.9	0.3	2.6	1	1	0	1	1	1	1	Alpha	amylase,	catalytic	domain
CBM_48	PF02922.13	gi|297620678|ref|YP_003708815.1|	-	2.6e-11	43.4	0.0	6.9e-11	42.0	0.0	1.8	1	0	0	1	1	1	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Glycos_transf_1	PF00534.15	gi|297620678|ref|YP_003708815.1|	-	9.4e-11	41.4	0.1	4.3e-09	36.0	0.0	2.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Alpha-amylase_C	PF02806.13	gi|297620678|ref|YP_003708815.1|	-	1.7e-08	34.5	0.0	9.9e-08	32.0	0.0	2.4	1	0	0	1	1	1	1	Alpha	amylase,	C-terminal	all-beta	domain
Glyco_trans_4_4	PF13579.1	gi|297620678|ref|YP_003708815.1|	-	0.051	13.7	0.0	0.11	12.5	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	4-like	domain
Glyco_transf_8	PF01501.15	gi|297620679|ref|YP_003708816.1|	-	3.1e-11	43.0	0.4	6.4e-11	42.0	0.3	1.4	1	1	0	1	1	1	1	Glycosyl	transferase	family	8
Mannosyl_trans3	PF11051.3	gi|297620679|ref|YP_003708816.1|	-	0.00057	19.3	0.0	0.00085	18.7	0.0	1.3	1	0	0	1	1	1	1	Mannosyltransferase	putative
tRNA_Me_trans	PF03054.11	gi|297620680|ref|YP_003708817.1|	-	3.3e-141	469.9	0.0	3.7e-141	469.8	0.0	1.0	1	0	0	1	1	1	1	tRNA	methyl	transferase
NAD_synthase	PF02540.12	gi|297620680|ref|YP_003708817.1|	-	1.8e-08	33.5	0.0	1.2e-05	24.3	0.0	2.2	2	0	0	2	2	2	2	NAD	synthase
ThiI	PF02568.9	gi|297620680|ref|YP_003708817.1|	-	7.7e-05	22.2	0.0	0.00022	20.7	0.0	1.8	2	0	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
ATP_bind_3	PF01171.15	gi|297620680|ref|YP_003708817.1|	-	0.00016	21.2	0.0	0.00038	20.0	0.0	1.6	1	1	0	1	1	1	1	PP-loop	family
Asn_synthase	PF00733.16	gi|297620680|ref|YP_003708817.1|	-	0.00017	21.1	0.0	0.00021	20.8	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
QueC	PF06508.8	gi|297620680|ref|YP_003708817.1|	-	0.0028	16.9	0.0	0.0077	15.5	0.0	1.7	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
adh_short	PF00106.20	gi|297620683|ref|YP_003708820.1|	-	5.6e-37	127.2	0.3	7.4e-37	126.8	0.2	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|297620683|ref|YP_003708820.1|	-	1.5e-30	106.7	0.2	1.8e-30	106.5	0.1	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|297620683|ref|YP_003708820.1|	-	1.2e-16	60.8	0.2	2.6e-16	59.7	0.2	1.5	1	1	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|297620683|ref|YP_003708820.1|	-	0.00028	20.4	0.1	0.00039	19.9	0.0	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.10	gi|297620683|ref|YP_003708820.1|	-	0.0083	15.0	0.6	0.011	14.6	0.4	1.1	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
Eno-Rase_NADH_b	PF12242.3	gi|297620683|ref|YP_003708820.1|	-	0.034	13.9	0.7	0.083	12.6	0.5	1.6	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
Glyco_hydro_15	PF00723.16	gi|297620684|ref|YP_003708821.1|	-	2e-54	184.8	0.3	7.4e-52	176.4	0.2	2.1	1	1	0	1	1	1	1	Glycosyl	hydrolases	family	15
PPR_3	PF13812.1	gi|297620684|ref|YP_003708821.1|	-	0.065	13.5	0.0	0.23	11.8	0.0	2.0	1	0	0	1	1	1	0	Pentatricopeptide	repeat	domain
OMP_b-brl	PF13505.1	gi|297620685|ref|YP_003708822.1|	-	4.5e-06	26.7	0.1	0.0049	16.8	0.0	2.1	1	1	1	2	2	2	2	Outer	membrane	protein	beta-barrel	domain
OMP_b-brl_3	PF14905.1	gi|297620685|ref|YP_003708822.1|	-	0.0014	17.4	0.1	0.0036	16.0	0.0	1.6	1	1	1	2	2	2	1	Outer	membrane	protein	beta-barrel	family
KdgM	PF06178.8	gi|297620685|ref|YP_003708822.1|	-	0.076	12.5	0.7	0.13	11.7	0.3	1.4	2	0	0	2	2	2	0	Oligogalacturonate-specific	porin	protein	(KdgM)
Acyl-CoA_dh_1	PF00441.19	gi|297620687|ref|YP_003708824.1|	-	1.8e-32	112.5	0.2	8.9e-32	110.2	0.1	2.0	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|297620687|ref|YP_003708824.1|	-	4.3e-28	98.1	0.1	9.7e-28	97.0	0.1	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|297620687|ref|YP_003708824.1|	-	2.1e-17	62.3	0.0	3.9e-17	61.5	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|297620687|ref|YP_003708824.1|	-	4.9e-10	39.7	0.0	2.9e-09	37.2	0.0	2.3	3	0	0	3	3	3	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_ox_N	PF14749.1	gi|297620687|ref|YP_003708824.1|	-	0.00049	20.3	0.0	0.0011	19.2	0.0	1.7	1	0	0	1	1	1	1	Acyl-coenzyme	A	oxidase	N-terminal
Carboxyl_trans	PF01039.17	gi|297620688|ref|YP_003708825.1|	-	1e-132	442.9	0.1	1.3e-132	442.6	0.1	1.0	1	0	0	1	1	1	1	Carboxyl	transferase	domain
MdcE	PF06833.6	gi|297620688|ref|YP_003708825.1|	-	1.7e-05	24.1	0.2	0.0027	16.9	0.1	2.2	2	0	0	2	2	2	2	Malonate	decarboxylase	gamma	subunit	(MdcE)
ECH	PF00378.15	gi|297620688|ref|YP_003708825.1|	-	0.034	13.2	2.6	0.65	9.0	0.2	2.4	2	0	0	2	2	2	0	Enoyl-CoA	hydratase/isomerase	family
DUF1446	PF07287.6	gi|297620689|ref|YP_003708826.1|	-	3.4e-119	397.5	0.1	4e-119	397.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1446)
ECH	PF00378.15	gi|297620691|ref|YP_003708828.1|	-	1.4e-46	158.6	0.0	1.6e-46	158.3	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
Lactamase_B	PF00753.22	gi|297620692|ref|YP_003708829.1|	-	2.9e-13	49.9	3.7	2.3e-12	46.9	2.5	2.0	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|297620692|ref|YP_003708829.1|	-	0.00012	21.6	0.1	0.00018	21.1	0.0	1.6	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Peptidase_M91	PF14891.1	gi|297620692|ref|YP_003708829.1|	-	0.2	11.7	0.1	0.32	11.0	0.1	1.2	1	0	0	1	1	1	0	Effector	protein
RHS_repeat	PF05593.9	gi|297620694|ref|YP_003708831.1|	-	3.9e-48	160.7	70.8	1.3e-05	25.2	0.0	20.3	16	5	4	20	20	20	14	RHS	Repeat
Sod_Fe_C	PF02777.13	gi|297620695|ref|YP_003708832.1|	-	0.0084	15.9	0.0	0.0094	15.7	0.0	1.1	1	0	0	1	1	1	1	Iron/manganese	superoxide	dismutases,	C-terminal	domain
Prok-RING_1	PF14446.1	gi|297620698|ref|YP_003708835.1|	-	0.024	14.3	5.9	0.095	12.4	1.3	2.3	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
Zn_ribbon_2	PF12674.2	gi|297620698|ref|YP_003708835.1|	-	0.029	14.6	0.8	0.051	13.9	0.6	1.5	1	0	0	1	1	1	0	Putative	zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|297620698|ref|YP_003708835.1|	-	0.7	9.2	5.2	5	6.5	0.1	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
FYVE	PF01363.16	gi|297620698|ref|YP_003708835.1|	-	5	7.0	7.2	2.1e+02	1.8	5.0	2.2	1	1	0	1	1	1	0	FYVE	zinc	finger
RHS_repeat	PF05593.9	gi|297620700|ref|YP_003708837.1|	-	1e-22	79.6	16.7	1.6e-05	24.8	0.1	7.8	8	0	0	8	8	8	5	RHS	Repeat
MORN_2	PF07661.8	gi|297620700|ref|YP_003708837.1|	-	0.015	15.2	0.0	2.9	8.2	0.0	4.5	4	0	0	4	4	4	0	MORN	repeat	variant
DUF4595	PF15283.1	gi|297620700|ref|YP_003708837.1|	-	6.5	6.3	7.8	3.2	7.3	0.3	3.3	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4595)	with	porin-like	fold
4HBT_2	PF13279.1	gi|297620701|ref|YP_003708838.1|	-	3.8e-12	46.7	0.2	4.5e-12	46.4	0.1	1.0	1	0	0	1	1	1	1	Thioesterase-like	superfamily
4HBT	PF03061.17	gi|297620701|ref|YP_003708838.1|	-	4.1e-12	46.0	0.0	6.2e-12	45.4	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
Acyl-ACP_TE	PF01643.12	gi|297620701|ref|YP_003708838.1|	-	2.3e-06	26.7	0.0	2.6e-06	26.5	0.0	1.0	1	0	0	1	1	1	1	Acyl-ACP	thioesterase
MM_CoA_mutase	PF01642.17	gi|297620703|ref|YP_003708840.1|	-	7.1e-97	324.6	0.0	1e-96	324.1	0.0	1.1	1	0	0	1	1	1	1	Methylmalonyl-CoA	mutase
ArgK	PF03308.11	gi|297620703|ref|YP_003708840.1|	-	1.9e-42	144.8	0.1	4e-42	143.8	0.0	1.5	1	0	0	1	1	1	1	ArgK	protein
B12-binding	PF02310.14	gi|297620703|ref|YP_003708840.1|	-	1e-11	44.7	0.0	3.4e-11	43.0	0.0	1.9	2	0	0	2	2	2	1	B12	binding	domain
cobW	PF02492.14	gi|297620703|ref|YP_003708840.1|	-	4.1e-09	36.1	0.0	1.2e-08	34.6	0.0	1.8	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
CbiA	PF01656.18	gi|297620703|ref|YP_003708840.1|	-	0.013	14.9	0.0	0.042	13.2	0.0	1.9	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_16	PF13191.1	gi|297620703|ref|YP_003708840.1|	-	0.032	14.1	0.7	0.25	11.3	0.0	2.7	3	0	0	3	3	3	0	AAA	ATPase	domain
AAA_29	PF13555.1	gi|297620703|ref|YP_003708840.1|	-	0.047	13.2	0.0	0.11	12.0	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
SRP54	PF00448.17	gi|297620703|ref|YP_003708840.1|	-	0.063	12.7	0.0	0.23	10.8	0.0	2.0	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
ABC_tran	PF00005.22	gi|297620703|ref|YP_003708840.1|	-	0.066	13.5	0.1	0.36	11.1	0.0	2.3	2	0	0	2	2	2	0	ABC	transporter
AAA_25	PF13481.1	gi|297620703|ref|YP_003708840.1|	-	0.18	11.1	0.1	0.74	9.1	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
Peptidase_M23	PF01551.17	gi|297620704|ref|YP_003708841.1|	-	9.1e-16	57.7	0.0	5.4e-15	55.2	0.0	2.1	2	0	0	2	2	2	1	Peptidase	family	M23
Biotin_lipoyl_2	PF13533.1	gi|297620704|ref|YP_003708841.1|	-	0.028	14.0	0.0	0.058	13.0	0.0	1.5	1	0	0	1	1	1	0	Biotin-lipoyl	like
E1_dh	PF00676.15	gi|297620705|ref|YP_003708842.1|	-	1.4e-90	303.0	0.0	1.7e-90	302.8	0.0	1.1	1	0	0	1	1	1	1	Dehydrogenase	E1	component
DXP_synthase_N	PF13292.1	gi|297620705|ref|YP_003708842.1|	-	0.01	14.7	0.0	0.1	11.5	0.0	2.2	2	0	0	2	2	2	0	1-deoxy-D-xylulose-5-phosphate	synthase
DUF4085	PF13315.1	gi|297620705|ref|YP_003708842.1|	-	0.055	12.8	1.0	0.091	12.1	0.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4085)
Transket_pyr	PF02779.19	gi|297620706|ref|YP_003708843.1|	-	2.4e-43	147.6	0.0	3.2e-43	147.2	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|297620706|ref|YP_003708843.1|	-	5.7e-38	129.6	0.0	1e-37	128.7	0.0	1.4	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
2-oxoacid_dh	PF00198.18	gi|297620707|ref|YP_003708844.1|	-	2e-71	239.9	0.0	3.3e-71	239.2	0.0	1.4	1	0	0	1	1	1	1	2-oxoacid	dehydrogenases	acyltransferase	(catalytic	domain)
Biotin_lipoyl	PF00364.17	gi|297620707|ref|YP_003708844.1|	-	7.9e-16	57.4	0.3	1.6e-15	56.4	0.2	1.6	1	0	0	1	1	1	1	Biotin-requiring	enzyme
E3_binding	PF02817.12	gi|297620707|ref|YP_003708844.1|	-	5.9e-14	51.4	1.9	1.2e-13	50.4	0.2	2.2	2	0	0	2	2	2	1	e3	binding	domain
DUF2332	PF10094.4	gi|297620707|ref|YP_003708844.1|	-	0.087	11.7	0.0	0.13	11.1	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2332)
DUF488	PF04343.8	gi|297620708|ref|YP_003708845.1|	-	3.6e-28	98.3	0.5	4e-28	98.2	0.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
NAD_binding_1	PF00175.16	gi|297620709|ref|YP_003708846.1|	-	1.8e-14	54.1	0.0	3.1e-13	50.2	0.0	2.7	3	0	0	3	3	3	1	Oxidoreductase	NAD-binding	domain
Globin	PF00042.17	gi|297620709|ref|YP_003708846.1|	-	9.4e-13	48.4	0.1	2.2e-11	44.0	0.0	2.3	2	0	0	2	2	2	1	Globin
FAD_binding_6	PF00970.19	gi|297620709|ref|YP_003708846.1|	-	9.4e-13	48.1	0.0	1.5e-12	47.4	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
Protoglobin	PF11563.3	gi|297620709|ref|YP_003708846.1|	-	3.2e-06	26.8	0.3	9.7e-06	25.3	0.1	1.8	2	0	0	2	2	2	1	Protoglobin
NAD_binding_6	PF08030.7	gi|297620709|ref|YP_003708846.1|	-	0.00019	21.3	0.1	0.00064	19.6	0.0	1.9	2	0	0	2	2	2	1	Ferric	reductase	NAD	binding	domain
Mur_ligase_C	PF02875.16	gi|297620709|ref|YP_003708846.1|	-	0.0035	17.3	0.1	3	7.9	0.0	2.4	2	0	0	2	2	2	2	Mur	ligase	family,	glutamate	ligase	domain
P16-Arc	PF04699.9	gi|297620709|ref|YP_003708846.1|	-	0.072	13.1	0.7	3.5	7.6	0.0	2.5	2	1	1	3	3	3	0	ARP2/3	complex	16	kDa	subunit	(p16-Arc)
Arginase	PF00491.16	gi|297620710|ref|YP_003708847.1|	-	3.9e-54	183.8	0.0	5.7e-54	183.2	0.0	1.2	1	0	0	1	1	1	1	Arginase	family
T4-Gluco-transf	PF09198.5	gi|297620710|ref|YP_003708847.1|	-	0.084	12.2	0.0	1.7	8.0	0.0	2.6	2	0	0	2	2	2	0	Bacteriophage	T4	beta-glucosyltransferase
PIG-L	PF02585.12	gi|297620711|ref|YP_003708848.1|	-	2.9e-19	69.8	0.2	5.3e-19	68.9	0.1	1.5	2	0	0	2	2	2	1	GlcNAc-PI	de-N-acetylase
Methyltrans_SAM	PF10672.4	gi|297620713|ref|YP_003708850.1|	-	5e-21	74.7	0.0	5.9e-21	74.5	0.0	1.1	1	0	0	1	1	1	1	S-adenosylmethionine-dependent	methyltransferase
Methyltransf_26	PF13659.1	gi|297620713|ref|YP_003708850.1|	-	1.9e-05	24.6	0.0	3.1e-05	23.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|297620713|ref|YP_003708850.1|	-	0.00026	20.4	0.0	0.0005	19.4	0.0	1.5	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Met_10	PF02475.11	gi|297620713|ref|YP_003708850.1|	-	0.0013	18.3	0.0	0.0017	17.9	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
GshA	PF08886.6	gi|297620713|ref|YP_003708850.1|	-	0.14	10.4	0.4	0.47	8.7	0.1	1.8	1	1	1	2	2	2	0	Glutamate-cysteine	ligase
DDE_Tnp_1_assoc	PF13808.1	gi|297620715|ref|YP_003708852.1|	-	2.3e-26	91.2	0.1	8.2e-26	89.5	0.0	1.9	2	0	0	2	2	2	1	DDE_Tnp_1-associated
DDE_Tnp_1	PF01609.16	gi|297620715|ref|YP_003708852.1|	-	4.8e-15	55.6	0.1	7e-15	55.1	0.1	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
DUF3981	PF13139.1	gi|297620717|ref|YP_003708854.1|	-	0.079	12.9	8.4	0.27	11.2	0.7	2.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3981)
DUF485	PF04341.7	gi|297620717|ref|YP_003708854.1|	-	0.77	9.5	8.3	0.14	11.8	0.5	2.4	1	1	0	2	2	2	0	Protein	of	unknown	function,	DUF485
Rrf2	PF02082.15	gi|297620718|ref|YP_003708855.1|	-	3.2e-24	84.8	0.4	4.1e-24	84.5	0.3	1.1	1	0	0	1	1	1	1	Transcriptional	regulator
HrcA_DNA-bdg	PF03444.10	gi|297620718|ref|YP_003708855.1|	-	3e-05	23.3	0.0	4.1e-05	22.9	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
MarR_2	PF12802.2	gi|297620718|ref|YP_003708855.1|	-	0.0017	17.9	0.0	0.0025	17.4	0.0	1.2	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.14	gi|297620718|ref|YP_003708855.1|	-	0.0032	17.3	0.2	0.0045	16.8	0.1	1.2	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF2250	PF10007.4	gi|297620718|ref|YP_003708855.1|	-	0.0043	16.9	0.1	0.0074	16.1	0.1	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TrmB	PF01978.14	gi|297620718|ref|YP_003708855.1|	-	0.012	15.2	0.1	0.016	14.8	0.0	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.7	gi|297620718|ref|YP_003708855.1|	-	0.018	14.6	0.3	0.033	13.8	0.2	1.5	1	1	0	1	1	1	0	HTH	domain
GntR	PF00392.16	gi|297620718|ref|YP_003708855.1|	-	0.057	12.8	0.1	0.084	12.3	0.1	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
Hemerythrin	PF01814.18	gi|297620719|ref|YP_003708856.1|	-	2.4e-22	79.5	2.4	3.6e-22	78.9	1.6	1.3	1	0	0	1	1	1	1	Hemerythrin	HHE	cation	binding	domain
ScdA_N	PF04405.9	gi|297620719|ref|YP_003708856.1|	-	3.7e-20	71.0	0.5	8.8e-20	69.8	0.2	1.7	2	0	0	2	2	2	1	Domain	of	Unknown	function	(DUF542)
Pox_A51	PF04948.8	gi|297620719|ref|YP_003708856.1|	-	0.018	13.7	0.4	0.024	13.3	0.3	1.2	1	0	0	1	1	1	0	Poxvirus	A51	protein
HTH_40	PF14493.1	gi|297620719|ref|YP_003708856.1|	-	0.023	14.9	0.9	0.023	14.9	0.6	2.2	1	1	0	2	2	2	0	Helix-turn-helix	domain
Rft-1	PF04506.8	gi|297620719|ref|YP_003708856.1|	-	0.1	10.9	0.1	0.13	10.5	0.1	1.1	1	0	0	1	1	1	0	Rft	protein
Ribonuc_2-5A	PF06479.7	gi|297620719|ref|YP_003708856.1|	-	0.3	10.9	0.1	0.3	10.9	0.1	2.7	1	1	1	2	2	2	0	Ribonuclease	2-5A
Fib_alpha	PF08702.5	gi|297620719|ref|YP_003708856.1|	-	2	8.5	7.1	0.5	10.4	1.0	2.5	1	1	2	3	3	3	0	Fibrinogen	alpha/beta	chain	family
Toxin_52	PF15605.1	gi|297620719|ref|YP_003708856.1|	-	2.3	8.1	5.6	0.97	9.3	0.1	2.8	2	1	1	3	3	3	0	Putative	toxin	52
COX1	PF00115.15	gi|297620720|ref|YP_003708857.1|	-	3.2e-42	144.7	49.5	3.2e-42	144.7	34.3	1.9	3	0	0	3	3	3	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
PT-TG	PF14449.1	gi|297620720|ref|YP_003708857.1|	-	0.094	12.5	0.0	0.67	9.7	0.0	2.5	3	0	0	3	3	3	0	Pre-toxin	TG
DUF3754	PF12576.3	gi|297620720|ref|YP_003708857.1|	-	0.097	12.2	0.5	0.47	10.0	0.4	2.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3754)
Med27	PF11571.3	gi|297620720|ref|YP_003708857.1|	-	0.15	12.1	0.2	0.45	10.6	0.1	1.7	1	0	0	1	1	1	0	Mediator	complex	subunit	27
DUF1003	PF06210.6	gi|297620721|ref|YP_003708858.1|	-	2.8e-33	114.0	1.4	4.6e-33	113.3	1.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1003)
DDE_Tnp_1	PF01609.16	gi|297620722|ref|YP_003708859.1|	-	4.2e-05	23.1	0.3	0.00045	19.8	0.1	2.3	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.1	gi|297620722|ref|YP_003708859.1|	-	0.011	15.7	0.0	0.011	15.7	0.0	2.0	2	0	0	2	2	2	0	Transposase	DDE	domain
Histone	PF00125.19	gi|297620722|ref|YP_003708859.1|	-	0.029	14.4	0.1	0.071	13.2	0.0	1.7	1	0	0	1	1	1	0	Core	histone	H2A/H2B/H3/H4
Put_DNA-bind_N	PF06971.8	gi|297620722|ref|YP_003708859.1|	-	0.088	12.5	2.8	0.6	9.9	0.0	2.9	3	0	0	3	3	3	0	Putative	DNA-binding	protein	N-terminus
Transposase_mut	PF00872.13	gi|297620723|ref|YP_003708860.1|	-	1.1e-101	340.2	0.0	1.3e-101	339.9	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.4	gi|297620723|ref|YP_003708860.1|	-	5e-11	42.6	0.0	2.1e-10	40.5	0.0	2.1	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.1	gi|297620723|ref|YP_003708860.1|	-	0.021	14.7	0.1	0.16	11.9	0.0	2.5	2	1	1	3	3	3	0	DDE	domain
Leuk-A4-hydro_C	PF09127.6	gi|297620723|ref|YP_003708860.1|	-	0.079	12.5	0.0	0.6	9.6	0.0	2.4	2	0	0	2	2	2	0	Leukotriene	A4	hydrolase,	C-terminal
UbiA	PF01040.13	gi|297620725|ref|YP_003708862.1|	-	6.8e-27	94.2	27.7	8.8e-27	93.9	19.2	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
Vma12	PF11712.3	gi|297620725|ref|YP_003708862.1|	-	0.078	12.6	2.2	0.5	10.0	0.1	2.5	2	0	0	2	2	2	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
COX4_pro	PF03626.9	gi|297620726|ref|YP_003708863.1|	-	1.8e-11	43.9	12.8	2.2e-11	43.6	8.9	1.1	1	0	0	1	1	1	1	Prokaryotic	Cytochrome	C	oxidase	subunit	IV
DUF2976	PF11190.3	gi|297620726|ref|YP_003708863.1|	-	0.0011	18.4	3.7	0.18	11.3	2.1	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF2976)
DUF2678	PF10856.3	gi|297620726|ref|YP_003708863.1|	-	0.004	16.8	3.0	0.0047	16.6	2.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2678)
ABC2_membrane_3	PF12698.2	gi|297620726|ref|YP_003708863.1|	-	0.011	14.7	6.9	0.014	14.4	4.8	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
YibE_F	PF07907.6	gi|297620726|ref|YP_003708863.1|	-	0.013	14.6	6.2	0.017	14.3	4.3	1.0	1	0	0	1	1	1	0	YibE/F-like	protein
DUF3733	PF12534.3	gi|297620726|ref|YP_003708863.1|	-	0.052	12.8	0.3	0.11	11.7	0.2	1.6	1	0	0	1	1	1	0	Leucine-rich	repeat	containing	protein	8
YfhO	PF09586.5	gi|297620726|ref|YP_003708863.1|	-	0.19	9.6	4.5	0.21	9.5	3.1	1.0	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
Ninjurin	PF04923.7	gi|297620726|ref|YP_003708863.1|	-	0.41	10.3	2.2	0.73	9.5	0.3	1.9	2	0	0	2	2	2	0	Ninjurin
DUF2393	PF09624.5	gi|297620726|ref|YP_003708863.1|	-	2	7.9	4.1	0.68	9.4	0.6	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2393)
TarH	PF02203.10	gi|297620726|ref|YP_003708863.1|	-	2.7	7.7	4.6	23	4.7	0.4	2.3	2	0	0	2	2	2	0	Tar	ligand	binding	domain	homologue
DUF3043	PF11241.3	gi|297620726|ref|YP_003708863.1|	-	3.6	7.1	4.5	1.2	8.6	1.1	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3043)
DUF4131	PF13567.1	gi|297620726|ref|YP_003708863.1|	-	4.1	6.7	6.6	6.6	6.1	4.6	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
COX3	PF00510.13	gi|297620727|ref|YP_003708864.1|	-	6.2e-14	52.0	23.4	1e-13	51.3	16.2	1.3	1	1	0	1	1	1	1	Cytochrome	c	oxidase	subunit	III
COX1	PF00115.15	gi|297620728|ref|YP_003708865.1|	-	5.2e-152	506.5	72.0	5.2e-152	506.5	49.9	1.5	2	0	0	2	2	2	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
TMEM61	PF15105.1	gi|297620728|ref|YP_003708865.1|	-	3.9	6.9	4.4	21	4.5	0.1	2.9	3	0	0	3	3	3	0	TMEM61	protein	family
COX_ARM	PF06481.9	gi|297620729|ref|YP_003708866.1|	-	1.7e-08	33.9	0.3	2.9e-08	33.2	0.2	1.4	1	0	0	1	1	1	1	COX	Aromatic	Rich	Motif
COX2	PF00116.15	gi|297620729|ref|YP_003708866.1|	-	9.2e-07	28.7	0.0	5e-06	26.3	0.0	2.0	1	1	0	1	1	1	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
COX2_TM	PF02790.10	gi|297620729|ref|YP_003708866.1|	-	2.8	7.9	10.1	0.088	12.7	2.1	2.0	2	0	0	2	2	2	0	Cytochrome	C	oxidase	subunit	II,	transmembrane	domain
RhoGEF	PF00621.15	gi|297620730|ref|YP_003708867.1|	-	1.6e-14	54.2	0.3	1.6e-14	54.2	0.2	2.9	3	0	0	3	3	3	1	RhoGEF	domain
FliG_M	PF14841.1	gi|297620730|ref|YP_003708867.1|	-	0.039	13.9	0.4	0.15	12.0	0.1	2.3	2	0	0	2	2	2	0	FliG	middle	domain
M16C_assoc	PF08367.6	gi|297620731|ref|YP_003708868.1|	-	6.1e-68	228.3	2.2	7.8e-68	227.9	0.2	2.1	3	0	0	3	3	3	1	Peptidase	M16C	associated
Peptidase_M16_C	PF05193.16	gi|297620731|ref|YP_003708868.1|	-	4.4e-31	107.9	0.1	4e-21	75.5	0.0	3.8	4	0	0	4	4	4	2	Peptidase	M16	inactive	domain
Peptidase_M16	PF00675.15	gi|297620731|ref|YP_003708868.1|	-	1.3e-07	31.4	0.0	1.8e-06	27.8	0.0	2.6	2	0	0	2	2	2	1	Insulinase	(Peptidase	family	M16)
CDP-OH_P_transf	PF01066.16	gi|297620732|ref|YP_003708869.1|	-	1.2e-13	51.1	2.8	1.2e-13	51.1	2.0	2.7	3	0	0	3	3	3	1	CDP-alcohol	phosphatidyltransferase
GPI2	PF06432.6	gi|297620732|ref|YP_003708869.1|	-	1.2	8.3	10.9	0.06	12.6	2.8	2.2	1	1	0	2	2	2	0	Phosphatidylinositol	N-acetylglucosaminyltransferase
LexA_DNA_bind	PF01726.11	gi|297620733|ref|YP_003708870.1|	-	6.2e-20	70.5	0.0	1e-19	69.8	0.0	1.4	1	0	0	1	1	1	1	LexA	DNA	binding	domain
Peptidase_S24	PF00717.18	gi|297620733|ref|YP_003708870.1|	-	0.00029	20.4	0.0	0.00042	19.9	0.0	1.3	1	0	0	1	1	1	1	Peptidase	S24-like
HTH_24	PF13412.1	gi|297620733|ref|YP_003708870.1|	-	0.0017	17.7	0.0	0.0034	16.7	0.0	1.6	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|297620733|ref|YP_003708870.1|	-	0.0099	15.6	0.0	0.018	14.8	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
PAP2	PF01569.16	gi|297620734|ref|YP_003708871.1|	-	3.9e-19	68.6	7.3	5.6e-19	68.0	4.0	2.0	1	1	1	2	2	2	1	PAP2	superfamily
DUF4064	PF13273.1	gi|297620734|ref|YP_003708871.1|	-	0.017	15.2	1.0	0.017	15.2	0.7	2.2	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
Oxidored_q1_N	PF00662.15	gi|297620734|ref|YP_003708871.1|	-	0.056	13.0	0.0	0.18	11.4	0.0	1.8	1	0	0	1	1	1	0	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
ECF-ribofla_trS	PF07155.7	gi|297620734|ref|YP_003708871.1|	-	0.07	12.8	0.1	0.07	12.8	0.0	2.1	2	1	0	2	2	2	0	ECF-type	riboflavin	transporter,	S	component
DUF3353	PF11833.3	gi|297620734|ref|YP_003708871.1|	-	0.34	10.3	11.3	0.3	10.5	1.3	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3353)
DUF1761	PF08570.5	gi|297620734|ref|YP_003708871.1|	-	0.74	9.8	6.0	9.1	6.3	0.0	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1761)
5TM-5TMR_LYT	PF07694.7	gi|297620734|ref|YP_003708871.1|	-	4.9	6.4	11.3	9.8	5.4	2.2	2.9	2	1	0	2	2	2	0	5TMR	of	5TMR-LYT
AA_permease	PF00324.16	gi|297620735|ref|YP_003708872.1|	-	7.4e-39	133.3	48.8	9.6e-39	133.0	33.9	1.1	1	0	0	1	1	1	1	Amino	acid	permease
RmuC	PF02646.11	gi|297620736|ref|YP_003708873.1|	-	1.4e-80	270.3	2.3	1.4e-80	270.3	1.6	1.6	2	0	0	2	2	2	1	RmuC	family
DUF2269	PF10027.4	gi|297620736|ref|YP_003708873.1|	-	0.012	15.3	1.3	0.029	14.1	0.1	2.0	2	0	0	2	2	2	0	Predicted	integral	membrane	protein	(DUF2269)
DUF4460	PF14687.1	gi|297620736|ref|YP_003708873.1|	-	0.03	14.0	1.3	0.062	13.0	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4460)
Fucokinase	PF07959.7	gi|297620736|ref|YP_003708873.1|	-	0.031	12.8	0.2	0.046	12.2	0.1	1.2	1	0	0	1	1	1	0	L-fucokinase
RE_Eco29kI	PF09517.5	gi|297620736|ref|YP_003708873.1|	-	0.09	12.0	0.1	0.49	9.6	0.0	2.1	2	0	0	2	2	2	0	Eco29kI	restriction	endonuclease
IMD	PF08397.6	gi|297620736|ref|YP_003708873.1|	-	0.96	8.7	9.4	0.27	10.5	4.1	1.9	2	0	0	2	2	2	0	IRSp53/MIM	homology	domain
ApbA	PF02558.11	gi|297620737|ref|YP_003708874.1|	-	0.043	13.2	0.4	5.1	6.5	0.0	2.4	1	1	1	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
DDE_Tnp_1_assoc	PF13808.1	gi|297620738|ref|YP_003708875.1|	-	4.9e-26	90.2	0.2	1.3e-25	88.8	0.0	1.8	2	0	0	2	2	2	1	DDE_Tnp_1-associated
DDE_Tnp_1	PF01609.16	gi|297620738|ref|YP_003708875.1|	-	2.1e-18	66.6	0.0	7.4e-18	64.8	0.0	1.8	1	1	0	1	1	1	1	Transposase	DDE	domain
DEK_C	PF08766.6	gi|297620738|ref|YP_003708875.1|	-	0.083	12.6	0.0	0.15	11.8	0.0	1.4	1	0	0	1	1	1	0	DEK	C	terminal	domain
DUF3566	PF12089.3	gi|297620740|ref|YP_003708877.1|	-	2.8e-06	27.3	1.0	2.8e-06	27.3	0.7	1.8	1	1	1	2	2	2	1	Transmembrane	domain	of	unknown	function	(DUF3566)
TPT	PF03151.11	gi|297620740|ref|YP_003708877.1|	-	0.022	14.4	1.7	0.025	14.2	1.2	1.1	1	0	0	1	1	1	0	Triose-phosphate	Transporter	family
7TM_GPCR_Sra	PF02117.11	gi|297620740|ref|YP_003708877.1|	-	0.41	9.2	2.9	0.48	8.9	2.0	1.1	1	0	0	1	1	1	0	Serpentine	type	7TM	GPCR	chemoreceptor	Sra
DUF2254	PF10011.4	gi|297620740|ref|YP_003708877.1|	-	0.44	8.9	2.5	0.47	8.8	1.8	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2254)
ABC2_membrane_3	PF12698.2	gi|297620740|ref|YP_003708877.1|	-	0.68	8.8	8.4	0.69	8.8	5.8	1.0	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Tic20	PF09685.5	gi|297620740|ref|YP_003708877.1|	-	0.87	9.5	6.5	1.2	9.1	4.5	1.2	1	0	0	1	1	1	0	Tic20-like	protein
YrvL	PF14184.1	gi|297620740|ref|YP_003708877.1|	-	1.5	8.6	8.7	1.8	8.3	6.0	1.1	1	0	0	1	1	1	0	Regulatory	protein	YrvL
DUF3953	PF13129.1	gi|297620740|ref|YP_003708877.1|	-	4.9	6.8	8.8	0.44	10.2	1.4	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3953)
DUF3899	PF13038.1	gi|297620740|ref|YP_003708877.1|	-	5.3	7.2	8.6	0.29	11.2	0.5	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3899)
SH3_3	PF08239.6	gi|297620741|ref|YP_003708878.1|	-	3.3e-13	49.5	0.0	2.3e-05	24.5	0.0	2.6	2	0	0	2	2	2	2	Bacterial	SH3	domain
SH3_4	PF06347.8	gi|297620741|ref|YP_003708878.1|	-	1.4e-06	27.7	0.0	0.0019	17.6	0.0	2.6	2	0	0	2	2	2	2	Bacterial	SH3	domain
DUF1811	PF08838.5	gi|297620741|ref|YP_003708878.1|	-	0.017	15.0	0.7	3.6	7.5	0.0	3.2	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF1811)
DUF501	PF04417.7	gi|297620741|ref|YP_003708878.1|	-	0.026	14.3	0.3	0.048	13.4	0.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF501)
SH3_5	PF08460.5	gi|297620741|ref|YP_003708878.1|	-	0.044	13.7	0.0	1.1	9.2	0.0	2.7	3	0	0	3	3	3	0	Bacterial	SH3	domain
DUF45	PF01863.12	gi|297620741|ref|YP_003708878.1|	-	0.36	10.6	5.0	0.61	9.8	3.5	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF45
DUF3972	PF13118.1	gi|297620741|ref|YP_003708878.1|	-	0.7	9.9	5.4	0.28	11.2	1.4	2.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3972)
DivIVA	PF05103.8	gi|297620741|ref|YP_003708878.1|	-	0.77	9.8	6.1	1.5	8.8	4.3	1.5	1	0	0	1	1	1	0	DivIVA	protein
DUF3279	PF11682.3	gi|297620742|ref|YP_003708879.1|	-	0.025	14.1	1.2	0.053	13.1	0.6	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3279)
SWIM	PF04434.12	gi|297620742|ref|YP_003708879.1|	-	0.025	14.0	0.5	0.057	12.8	0.3	1.7	1	0	0	1	1	1	0	SWIM	zinc	finger
PhoH	PF02562.11	gi|297620743|ref|YP_003708880.1|	-	4.3e-55	186.1	0.0	6e-55	185.6	0.0	1.2	1	0	0	1	1	1	1	PhoH-like	protein
PIN_4	PF13638.1	gi|297620743|ref|YP_003708880.1|	-	3.6e-29	101.5	0.0	5.4e-29	100.9	0.0	1.3	1	0	0	1	1	1	1	PIN	domain
AAA_30	PF13604.1	gi|297620743|ref|YP_003708880.1|	-	4e-10	39.6	0.0	0.00052	19.6	0.0	2.8	3	0	0	3	3	3	2	AAA	domain
AAA_22	PF13401.1	gi|297620743|ref|YP_003708880.1|	-	3.5e-07	30.4	0.0	2.3e-06	27.7	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_11	PF13086.1	gi|297620743|ref|YP_003708880.1|	-	0.0013	18.3	0.0	0.036	13.6	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|297620743|ref|YP_003708880.1|	-	0.0016	17.9	0.0	0.003	16.9	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
Viral_helicase1	PF01443.13	gi|297620743|ref|YP_003708880.1|	-	0.004	16.6	0.0	0.0073	15.8	0.0	1.4	1	0	0	1	1	1	1	Viral	(Superfamily	1)	RNA	helicase
AAA_19	PF13245.1	gi|297620743|ref|YP_003708880.1|	-	0.032	13.9	0.0	0.083	12.6	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA	PF00004.24	gi|297620743|ref|YP_003708880.1|	-	0.045	13.9	0.3	0.12	12.6	0.2	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DEAD	PF00270.24	gi|297620743|ref|YP_003708880.1|	-	0.062	12.7	0.0	0.61	9.5	0.0	2.1	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
NB-ARC	PF00931.17	gi|297620743|ref|YP_003708880.1|	-	0.09	11.6	0.0	0.23	10.3	0.0	1.6	2	0	0	2	2	2	0	NB-ARC	domain
AAA_25	PF13481.1	gi|297620743|ref|YP_003708880.1|	-	0.15	11.4	0.0	0.39	10.0	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
DEAD	PF00270.24	gi|297620744|ref|YP_003708881.1|	-	6.7e-43	146.1	0.2	1.4e-41	141.8	0.0	2.1	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|297620744|ref|YP_003708881.1|	-	2.2e-29	101.1	0.4	5.1e-29	99.9	0.3	1.7	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DUF1253	PF06862.7	gi|297620744|ref|YP_003708881.1|	-	0.0027	16.2	3.0	6.9	4.9	0.1	3.9	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF1253)
Helicase_RecD	PF05127.9	gi|297620744|ref|YP_003708881.1|	-	0.0046	16.6	0.0	0.13	11.8	0.0	2.4	1	1	0	2	2	2	1	Helicase
ResIII	PF04851.10	gi|297620744|ref|YP_003708881.1|	-	0.02	14.7	0.0	0.075	12.8	0.0	1.9	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.1	gi|297620744|ref|YP_003708881.1|	-	0.089	12.5	0.7	0.44	10.3	0.1	2.6	2	2	0	2	2	2	0	Part	of	AAA	domain
TauE	PF01925.14	gi|297620745|ref|YP_003708882.1|	-	5.1e-10	39.2	25.6	1e-07	31.6	2.1	2.1	2	0	0	2	2	2	2	Sulfite	exporter	TauE/SafE
DUF2108	PF09881.4	gi|297620745|ref|YP_003708882.1|	-	7.1	6.5	15.4	1.9	8.3	1.1	4.0	3	2	0	3	3	3	0	Predicted	membrane	protein	(DUF2108)
Fis1_TPR_C	PF14853.1	gi|297620746|ref|YP_003708883.1|	-	0.094	12.6	0.2	0.12	12.2	0.1	1.1	1	0	0	1	1	1	0	Fis1	C-terminal	tetratricopeptide	repeat
HI0933_like	PF03486.9	gi|297620747|ref|YP_003708884.1|	-	2.5e-115	385.2	0.0	2.8e-115	385.0	0.0	1.0	1	0	0	1	1	1	1	HI0933-like	protein
FAD_binding_2	PF00890.19	gi|297620747|ref|YP_003708884.1|	-	5.2e-08	32.1	0.5	1.9e-05	23.6	0.3	3.0	3	0	0	3	3	3	1	FAD	binding	domain
GIDA	PF01134.17	gi|297620747|ref|YP_003708884.1|	-	1.1e-06	27.7	0.2	0.022	13.6	0.2	2.3	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
Pyr_redox_2	PF07992.9	gi|297620747|ref|YP_003708884.1|	-	1.5e-06	28.2	0.0	8.9e-06	25.7	0.0	2.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|297620747|ref|YP_003708884.1|	-	7.3e-06	25.1	1.1	0.002	17.1	0.0	2.8	2	1	2	4	4	4	2	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|297620747|ref|YP_003708884.1|	-	0.00011	22.3	0.0	0.0015	18.5	0.0	2.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|297620747|ref|YP_003708884.1|	-	0.0011	17.9	0.1	0.0017	17.3	0.0	1.3	1	0	0	1	1	1	1	Lycopene	cyclase	protein
FAD_oxidored	PF12831.2	gi|297620747|ref|YP_003708884.1|	-	0.0094	15.0	0.0	0.024	13.7	0.0	1.6	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.9	gi|297620747|ref|YP_003708884.1|	-	0.011	14.3	0.2	0.018	13.6	0.1	1.3	1	0	0	1	1	1	0	Tryptophan	halogenase
Pyr_redox	PF00070.22	gi|297620747|ref|YP_003708884.1|	-	0.049	14.0	0.1	1.8	9.0	0.1	2.5	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|297620747|ref|YP_003708884.1|	-	0.12	12.4	0.2	0.33	11.0	0.0	1.9	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
Glyoxalase_2	PF12681.2	gi|297620748|ref|YP_003708885.1|	-	0.095	13.3	0.1	0.14	12.7	0.1	1.3	1	1	0	1	1	1	0	Glyoxalase-like	domain
Na_H_Exchanger	PF00999.16	gi|297620749|ref|YP_003708886.1|	-	3.2e-31	108.2	51.0	4.2e-31	107.8	35.4	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_N	PF02254.13	gi|297620749|ref|YP_003708886.1|	-	0.00016	21.6	0.0	0.00028	20.8	0.0	1.3	1	0	0	1	1	1	1	TrkA-N	domain
DUF829	PF05705.9	gi|297620749|ref|YP_003708886.1|	-	0.12	12.1	0.0	0.45	10.1	0.0	1.9	2	0	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF829)
CN_hydrolase	PF00795.17	gi|297620751|ref|YP_003708888.1|	-	3.7e-18	65.5	0.0	5.8e-18	64.8	0.0	1.3	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
Acetyltransf_1	PF00583.19	gi|297620751|ref|YP_003708888.1|	-	1.6e-06	28.0	0.0	3.4e-06	26.9	0.0	1.5	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|297620751|ref|YP_003708888.1|	-	0.0012	19.0	0.1	0.0042	17.2	0.1	2.0	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|297620751|ref|YP_003708888.1|	-	0.083	13.0	0.0	0.46	10.6	0.0	2.2	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
BON	PF04972.12	gi|297620752|ref|YP_003708889.1|	-	1.1e-08	34.6	0.0	1.4e-08	34.3	0.0	1.2	1	0	0	1	1	1	1	BON	domain
adh_short	PF00106.20	gi|297620753|ref|YP_003708890.1|	-	2.9e-26	92.3	0.0	4.4e-26	91.7	0.0	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|297620753|ref|YP_003708890.1|	-	2.1e-24	86.6	0.0	2.5e-24	86.3	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|297620753|ref|YP_003708890.1|	-	1.6e-09	37.6	0.0	2.6e-09	37.0	0.0	1.3	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|297620753|ref|YP_003708890.1|	-	5e-05	23.3	0.0	0.00013	22.0	0.0	1.6	1	1	1	2	2	2	1	NADH(P)-binding
Epimerase	PF01370.16	gi|297620753|ref|YP_003708890.1|	-	0.00022	20.7	0.0	0.0011	18.4	0.0	2.2	1	1	1	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
Glyco_tran_WecB	PF03808.8	gi|297620753|ref|YP_003708890.1|	-	0.013	14.8	0.0	0.024	14.0	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	WecB/TagA/CpsF	family
F420_oxidored	PF03807.12	gi|297620753|ref|YP_003708890.1|	-	0.023	15.0	0.1	0.051	14.0	0.1	1.5	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
Ank	PF00023.25	gi|297620753|ref|YP_003708890.1|	-	0.037	13.8	0.1	0.22	11.3	0.0	2.3	2	0	0	2	2	2	0	Ankyrin	repeat
DFP	PF04127.10	gi|297620753|ref|YP_003708890.1|	-	0.053	13.1	0.1	0.11	12.1	0.1	1.4	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
ADH_N	PF08240.7	gi|297620754|ref|YP_003708891.1|	-	3.5e-29	100.7	5.5	3.5e-29	100.7	3.8	1.6	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|297620754|ref|YP_003708891.1|	-	6.2e-27	93.6	0.0	3.1e-25	88.1	0.0	2.2	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|297620754|ref|YP_003708891.1|	-	0.00016	20.8	0.0	0.00027	20.1	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|297620754|ref|YP_003708891.1|	-	0.00028	20.7	0.2	0.00077	19.3	0.1	1.8	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.13	gi|297620754|ref|YP_003708891.1|	-	0.0045	16.6	0.1	0.0092	15.6	0.1	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_10	PF13460.1	gi|297620754|ref|YP_003708891.1|	-	0.012	15.6	0.1	0.018	15.0	0.1	1.3	1	0	0	1	1	1	0	NADH(P)-binding
AlaDh_PNT_C	PF01262.16	gi|297620754|ref|YP_003708891.1|	-	0.031	13.8	0.0	0.081	12.4	0.0	1.7	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.1	gi|297620754|ref|YP_003708891.1|	-	0.049	13.8	0.0	0.11	12.7	0.0	1.6	1	0	0	1	1	1	0	Putative	NAD(P)-binding
TPP_enzyme_C	PF02775.16	gi|297620754|ref|YP_003708891.1|	-	0.068	12.7	0.9	0.25	10.8	0.4	2.1	2	1	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
ApbA	PF02558.11	gi|297620754|ref|YP_003708891.1|	-	0.11	11.9	0.1	0.23	10.9	0.0	1.6	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
DUF2477	PF10631.4	gi|297620754|ref|YP_003708891.1|	-	0.48	10.6	5.7	0.48	10.6	2.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2477)
ThiF	PF00899.16	gi|297620754|ref|YP_003708891.1|	-	4.6	7.0	6.3	8.2	6.2	2.5	2.4	1	1	1	2	2	2	0	ThiF	family
Cytochrom_C	PF00034.16	gi|297620755|ref|YP_003708892.1|	-	1.8e-12	47.9	0.7	3.1e-09	37.5	0.0	2.9	2	1	0	2	2	2	2	Cytochrome	c
Cytochrome_CBB3	PF13442.1	gi|297620755|ref|YP_003708892.1|	-	4.9e-11	42.6	2.3	2.1e-07	31.0	0.0	3.3	2	1	1	3	3	3	2	Cytochrome	C	oxidase,	cbb3-type,	subunit	III
Cytochrome_C554	PF13435.1	gi|297620755|ref|YP_003708892.1|	-	0.0026	17.8	0.0	1	9.4	0.0	2.2	2	0	0	2	2	2	2	Cytochrome	c554	and	c-prime
Cytochrome_C7	PF14522.1	gi|297620755|ref|YP_003708892.1|	-	0.0056	16.2	0.3	4	7.1	0.0	2.3	2	0	0	2	2	2	2	Cytochrome	c7
Cytochrom_C550	PF14495.1	gi|297620755|ref|YP_003708892.1|	-	0.0078	15.6	0.2	0.75	9.2	0.0	2.6	3	0	0	3	3	3	1	Cytochrome	c-550	domain
Cytochrom_c3_2	PF14537.1	gi|297620755|ref|YP_003708892.1|	-	0.063	13.6	0.3	16	5.9	0.0	2.2	2	0	0	2	2	2	0	Cytochrome	c3
TauE	PF01925.14	gi|297620756|ref|YP_003708893.1|	-	4.3e-41	140.9	32.4	5e-41	140.7	22.5	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
UPF0016	PF01169.14	gi|297620756|ref|YP_003708893.1|	-	4.3	7.5	18.8	0.46	10.6	0.1	4.4	3	2	1	5	5	5	0	Uncharacterized	protein	family	UPF0016
Adenine_deam_C	PF13382.1	gi|297620757|ref|YP_003708894.1|	-	6.8e-57	191.3	0.0	1e-56	190.7	0.0	1.3	1	0	0	1	1	1	1	Adenine	deaminase	C-terminal	domain
Amidohydro_1	PF01979.15	gi|297620757|ref|YP_003708894.1|	-	1.4e-24	87.3	0.5	5.9e-23	82.0	0.3	2.1	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|297620757|ref|YP_003708894.1|	-	8.7e-08	31.8	0.2	3.3e-07	30.0	0.1	2.0	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|297620757|ref|YP_003708894.1|	-	9.1e-06	25.8	0.0	0.14	12.1	0.1	2.5	1	1	0	2	2	2	2	Amidohydrolase
DUF853	PF05872.7	gi|297620758|ref|YP_003708895.1|	-	1.6e-173	577.7	2.3	7.7e-172	572.1	1.6	2.0	1	1	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF853)
AAA_10	PF12846.2	gi|297620758|ref|YP_003708895.1|	-	3e-24	85.9	0.2	1.4e-23	83.8	0.0	2.1	2	1	0	2	2	2	1	AAA-like	domain
DUF87	PF01935.12	gi|297620758|ref|YP_003708895.1|	-	4.4e-10	39.7	2.6	3.4e-09	36.8	0.1	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_22	PF13401.1	gi|297620758|ref|YP_003708895.1|	-	1.9e-08	34.4	1.3	0.069	13.2	0.0	4.0	3	1	0	3	3	3	2	AAA	domain
AAA	PF00004.24	gi|297620758|ref|YP_003708895.1|	-	4.3e-08	33.4	3.4	0.031	14.4	0.0	3.6	3	0	0	3	3	3	3	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zot	PF05707.7	gi|297620758|ref|YP_003708895.1|	-	2.8e-06	26.9	0.1	3.2e-05	23.4	0.0	2.5	3	0	0	3	3	3	1	Zonular	occludens	toxin	(Zot)
ResIII	PF04851.10	gi|297620758|ref|YP_003708895.1|	-	3.1e-06	27.1	2.1	0.044	13.5	0.1	3.3	3	0	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
TrwB_AAD_bind	PF10412.4	gi|297620758|ref|YP_003708895.1|	-	4.6e-06	25.5	0.4	5.4e-05	21.9	0.1	2.2	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
FtsK_SpoIIIE	PF01580.13	gi|297620758|ref|YP_003708895.1|	-	4.7e-06	26.2	0.1	0.01	15.3	0.0	2.5	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
AAA_16	PF13191.1	gi|297620758|ref|YP_003708895.1|	-	0.0015	18.5	2.2	2.1	8.2	0.0	3.2	3	1	1	4	4	4	2	AAA	ATPase	domain
AAA_30	PF13604.1	gi|297620758|ref|YP_003708895.1|	-	0.0074	15.8	0.1	0.24	10.9	0.1	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|297620758|ref|YP_003708895.1|	-	0.016	15.5	10.9	0.28	11.4	0.6	2.5	2	1	0	2	2	2	0	AAA	domain
DEAD	PF00270.24	gi|297620758|ref|YP_003708895.1|	-	0.038	13.4	0.1	14	5.1	0.0	3.1	3	0	0	3	3	3	0	DEAD/DEAH	box	helicase
NACHT	PF05729.7	gi|297620758|ref|YP_003708895.1|	-	0.048	13.3	1.9	5.4	6.6	0.0	2.6	2	1	0	2	2	2	0	NACHT	domain
AAA_18	PF13238.1	gi|297620758|ref|YP_003708895.1|	-	0.05	13.9	1.0	0.7	10.1	0.1	2.6	2	0	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|297620758|ref|YP_003708895.1|	-	0.057	14.2	0.8	0.25	12.1	0.0	2.4	3	0	0	3	3	2	0	AAA	domain
AAA_25	PF13481.1	gi|297620758|ref|YP_003708895.1|	-	0.094	12.1	0.0	0.37	10.1	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
CbiA	PF01656.18	gi|297620758|ref|YP_003708895.1|	-	0.21	10.9	4.3	0.063	12.6	0.8	1.8	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Aldo_ket_red	PF00248.16	gi|297620759|ref|YP_003708896.1|	-	7.7e-76	254.6	0.0	8.8e-76	254.4	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
RHH_1	PF01402.16	gi|297620759|ref|YP_003708896.1|	-	1.2	9.1	3.9	28	4.7	0.2	3.1	3	0	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
CBAH	PF02275.13	gi|297620761|ref|YP_003708898.1|	-	8.3e-71	238.9	0.0	1.4e-70	238.2	0.0	1.3	1	1	0	1	1	1	1	Linear	amide	C-N	hydrolases,	choloylglycine	hydrolase	family
AAT	PF03417.11	gi|297620761|ref|YP_003708898.1|	-	2.8e-10	40.0	0.0	4.4e-10	39.4	0.0	1.4	1	0	0	1	1	1	1	Acyl-coenzyme	A:6-aminopenicillanic	acid	acyl-transferase
Terpene_synth_C	PF03936.11	gi|297620762|ref|YP_003708899.1|	-	1.9e-16	60.0	0.5	2.6e-16	59.6	0.3	1.1	1	0	0	1	1	1	1	Terpene	synthase	family,	metal	binding	domain
Docking	PF08990.6	gi|297620763|ref|YP_003708900.1|	-	0.061	12.5	0.1	0.13	11.5	0.1	1.6	1	0	0	1	1	1	0	Erythronolide	synthase	docking
Transposase_mut	PF00872.13	gi|297620764|ref|YP_003708901.1|	-	8.2e-97	324.1	0.0	1e-96	323.8	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.4	gi|297620764|ref|YP_003708901.1|	-	2.1e-10	40.6	0.0	8.5e-10	38.6	0.0	2.0	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.1	gi|297620764|ref|YP_003708901.1|	-	0.026	14.4	0.0	0.13	12.1	0.1	2.2	1	1	1	2	2	2	0	DDE	domain
DUF3298	PF11738.3	gi|297620765|ref|YP_003708902.1|	-	3.1e-07	30.7	0.1	5.5e-07	30.0	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3298)
DUF3892	PF13031.1	gi|297620766|ref|YP_003708903.1|	-	0.01	16.2	0.1	0.035	14.5	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3892)
DUF1016	PF06250.6	gi|297620767|ref|YP_003708904.1|	-	2.6e-70	236.9	0.0	3e-70	236.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1016)
PDDEXK_3	PF13366.1	gi|297620767|ref|YP_003708904.1|	-	0.0041	17.1	0.0	0.0067	16.4	0.0	1.3	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
DUF1359	PF07097.6	gi|297620767|ref|YP_003708904.1|	-	0.072	13.1	0.0	0.2	11.7	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1359)
Prok_Ub	PF14454.1	gi|297620767|ref|YP_003708904.1|	-	0.075	12.6	0.0	0.13	11.9	0.0	1.4	1	0	0	1	1	1	0	Prokaryotic	Ubiquitin
DUF1016	PF06250.6	gi|297620768|ref|YP_003708905.1|	-	4.2e-24	85.1	0.1	4.6e-24	84.9	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1016)
RNA_pol_I_TF	PF04090.7	gi|297620768|ref|YP_003708905.1|	-	0.098	11.9	0.2	0.2	10.8	0.1	1.4	1	1	0	1	1	1	0	RNA	polymerase	I	specific	initiation	factor
Toprim_2	PF13155.1	gi|297620769|ref|YP_003708906.1|	-	0.00031	20.9	0.0	0.00048	20.3	0.0	1.3	1	0	0	1	1	1	1	Toprim-like
Toprim_4	PF13662.1	gi|297620769|ref|YP_003708906.1|	-	0.00062	19.7	0.0	0.00093	19.1	0.0	1.2	1	0	0	1	1	1	1	Toprim	domain
Toprim_N	PF08275.6	gi|297620769|ref|YP_003708906.1|	-	0.004	17.0	0.0	0.0059	16.5	0.0	1.3	1	0	0	1	1	1	1	DNA	primase	catalytic	core,	N-terminal	domain
tRNA-synt_1	PF00133.17	gi|297620770|ref|YP_003708907.1|	-	1.8e-218	726.4	0.1	2.5e-218	725.9	0.1	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|297620770|ref|YP_003708907.1|	-	6e-30	104.0	0.0	1.2e-29	103.0	0.0	1.5	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|297620770|ref|YP_003708907.1|	-	2.7e-19	69.1	0.2	7.2e-06	24.9	0.0	4.0	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.14	gi|297620770|ref|YP_003708907.1|	-	0.0004	19.5	0.0	0.00094	18.3	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
PhdYeFM_antitox	PF02604.14	gi|297620771|ref|YP_003708908.1|	-	9e-10	38.0	0.3	1.1e-09	37.7	0.2	1.1	1	0	0	1	1	1	1	Antitoxin	Phd_YefM,	type	II	toxin-antitoxin	system
RelB_N	PF12910.2	gi|297620771|ref|YP_003708908.1|	-	3.5e-06	26.2	0.0	4.9e-06	25.7	0.0	1.3	1	0	0	1	1	1	1	Antitoxin	of	toxin-antitoxin	stability	system	N-terminal
Methyltransf_23	PF13489.1	gi|297620772|ref|YP_003708909.1|	-	4.1e-24	85.1	0.1	7.3e-24	84.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297620772|ref|YP_003708909.1|	-	2.9e-10	39.9	0.0	4.7e-10	39.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297620772|ref|YP_003708909.1|	-	8.2e-10	39.0	0.0	1.9e-09	37.9	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297620772|ref|YP_003708909.1|	-	9.7e-09	35.6	0.0	2.9e-08	34.0	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297620772|ref|YP_003708909.1|	-	1.2e-07	32.2	0.0	2.9e-07	31.0	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297620772|ref|YP_003708909.1|	-	0.00044	20.2	0.0	0.0019	18.2	0.0	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
RNase_H_2	PF13482.1	gi|297620772|ref|YP_003708909.1|	-	0.0008	19.2	0.1	0.31	10.8	0.0	2.3	2	0	0	2	2	2	2	RNase_H	superfamily
Peptidase_S24	PF00717.18	gi|297620773|ref|YP_003708910.1|	-	9e-08	31.6	0.0	2.5e-07	30.2	0.0	1.7	1	1	0	1	1	1	1	Peptidase	S24-like
Peptidase_S26	PF10502.4	gi|297620773|ref|YP_003708910.1|	-	0.00085	18.8	0.0	0.0072	15.8	0.0	2.2	2	0	0	2	2	2	1	Signal	peptidase,	peptidase	S26
Gly_kinase	PF02595.10	gi|297620775|ref|YP_003708912.1|	-	2.6e-110	368.6	3.3	2.9e-110	368.5	2.3	1.0	1	0	0	1	1	1	1	Glycerate	kinase	family
NAPRTase	PF04095.11	gi|297620776|ref|YP_003708913.1|	-	5.5e-18	65.1	0.0	7.9e-18	64.6	0.0	1.1	1	0	0	1	1	1	1	Nicotinate	phosphoribosyltransferase	(NAPRTase)	family
QRPTase_N	PF02749.11	gi|297620776|ref|YP_003708913.1|	-	0.011	15.5	0.0	0.18	11.6	0.0	2.3	2	0	0	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Isochorismatase	PF00857.15	gi|297620778|ref|YP_003708915.1|	-	2.2e-32	112.3	0.1	4.2e-32	111.4	0.1	1.4	1	1	0	1	1	1	1	Isochorismatase	family
DUF2717	PF10911.3	gi|297620778|ref|YP_003708915.1|	-	0.057	12.9	0.0	0.12	11.8	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2717)
SnoaL_2	PF12680.2	gi|297620779|ref|YP_003708916.1|	-	1.6e-07	31.6	0.0	1.9e-07	31.4	0.0	1.1	1	0	0	1	1	1	1	SnoaL-like	domain
SnoaL	PF07366.7	gi|297620779|ref|YP_003708916.1|	-	2.3e-05	23.9	0.1	4.1e-05	23.1	0.0	1.5	1	1	0	1	1	1	1	SnoaL-like	polyketide	cyclase
Complex1_49kDa	PF00346.14	gi|297620779|ref|YP_003708916.1|	-	0.032	13.2	0.0	0.037	13.0	0.0	1.1	1	0	0	1	1	1	0	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
DUF167	PF02594.11	gi|297620780|ref|YP_003708917.1|	-	3.8e-28	97.2	1.0	4.4e-28	97.0	0.7	1.0	1	0	0	1	1	1	1	Uncharacterised	ACR,	YggU	family	COG1872
adh_short	PF00106.20	gi|297620781|ref|YP_003708918.1|	-	9e-13	48.4	0.1	2e-08	34.3	0.0	2.1	1	1	1	2	2	2	2	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|297620781|ref|YP_003708918.1|	-	2.9e-08	33.7	0.0	3.3e-08	33.5	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|297620781|ref|YP_003708918.1|	-	7.5e-07	28.9	0.1	0.001	18.8	0.0	2.1	1	1	1	2	2	2	2	KR	domain
Epimerase	PF01370.16	gi|297620781|ref|YP_003708918.1|	-	3.2e-06	26.7	0.0	4.1e-06	26.4	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|297620781|ref|YP_003708918.1|	-	5.6e-06	25.4	0.0	1.6e-05	23.9	0.0	1.7	2	0	0	2	2	2	1	RmlD	substrate	binding	domain
NAD_binding_10	PF13460.1	gi|297620781|ref|YP_003708918.1|	-	1.3e-05	25.3	0.0	1.6e-05	25.0	0.0	1.4	1	1	0	1	1	1	1	NADH(P)-binding
DAGK_cat	PF00781.19	gi|297620781|ref|YP_003708918.1|	-	0.00076	18.9	0.5	0.0028	17.0	0.3	1.7	1	1	0	1	1	1	1	Diacylglycerol	kinase	catalytic	domain
Semialdhyde_dh	PF01118.19	gi|297620781|ref|YP_003708918.1|	-	0.021	15.0	0.5	0.036	14.3	0.4	1.6	1	1	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|297620781|ref|YP_003708918.1|	-	0.026	14.4	0.0	0.045	13.6	0.0	1.4	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
DXP_reductoisom	PF02670.11	gi|297620781|ref|YP_003708918.1|	-	0.11	13.0	0.1	0.18	12.3	0.1	1.5	1	1	0	1	1	1	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
NmrA	PF05368.8	gi|297620781|ref|YP_003708918.1|	-	0.12	11.5	0.3	0.21	10.8	0.2	1.3	1	0	0	1	1	1	0	NmrA-like	family
adh_short	PF00106.20	gi|297620782|ref|YP_003708919.1|	-	2.3e-33	115.4	0.0	2.9e-33	115.1	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|297620782|ref|YP_003708919.1|	-	8e-20	71.2	0.0	1.1e-19	70.8	0.0	1.1	1	0	0	1	1	1	1	KR	domain
adh_short_C2	PF13561.1	gi|297620782|ref|YP_003708919.1|	-	8.4e-20	71.5	0.0	1.1e-19	71.2	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
3Beta_HSD	PF01073.14	gi|297620782|ref|YP_003708919.1|	-	0.013	14.2	0.0	0.018	13.7	0.0	1.2	1	0	0	1	1	1	0	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Epimerase	PF01370.16	gi|297620782|ref|YP_003708919.1|	-	0.014	14.8	0.0	0.02	14.3	0.0	1.2	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
Eno-Rase_NADH_b	PF12242.3	gi|297620782|ref|YP_003708919.1|	-	0.017	14.8	0.4	0.034	13.9	0.3	1.4	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
DUF1776	PF08643.5	gi|297620782|ref|YP_003708919.1|	-	0.027	13.5	0.0	0.038	13.1	0.0	1.1	1	0	0	1	1	1	0	Fungal	family	of	unknown	function	(DUF1776)
Ldh_1_N	PF00056.18	gi|297620782|ref|YP_003708919.1|	-	0.14	11.9	0.0	0.23	11.2	0.0	1.3	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
Integrase_AP2	PF14657.1	gi|297620783|ref|YP_003708920.1|	-	0.0063	16.2	0.7	0.028	14.1	0.0	2.2	2	0	0	2	2	2	1	AP2-like	DNA-binding	integrase	domain
Kinetochor_Ybp2	PF08568.5	gi|297620783|ref|YP_003708920.1|	-	0.051	11.8	0.0	0.059	11.6	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family,	YAP/Alf4/glomulin
rve	PF00665.21	gi|297620784|ref|YP_003708921.1|	-	3e-21	75.7	0.0	4.6e-21	75.1	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.1	gi|297620784|ref|YP_003708921.1|	-	4.8e-15	55.3	1.3	9.7e-15	54.3	0.9	1.5	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.1	gi|297620784|ref|YP_003708921.1|	-	1.7e-13	49.8	0.3	3.7e-13	48.7	0.2	1.6	1	0	0	1	1	1	1	Integrase	core	domain
rve_2	PF13333.1	gi|297620784|ref|YP_003708921.1|	-	0.00012	22.0	2.9	0.00024	21.0	2.0	1.6	1	0	0	1	1	1	1	Integrase	core	domain
HpaB_N	PF11794.3	gi|297620784|ref|YP_003708921.1|	-	0.035	13.5	0.4	5	6.4	0.0	2.2	2	0	0	2	2	2	0	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HTH_32	PF13565.1	gi|297620784|ref|YP_003708921.1|	-	0.064	14.0	0.3	0.064	14.0	0.2	2.8	3	1	0	3	3	3	0	Homeodomain-like	domain
HTH_Tnp_1	PF01527.15	gi|297620785|ref|YP_003708922.1|	-	7.4e-12	45.0	0.4	9.5e-12	44.7	0.3	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.1	gi|297620785|ref|YP_003708922.1|	-	1.7e-05	24.7	0.0	2.5e-05	24.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297620785|ref|YP_003708922.1|	-	0.00018	21.0	0.0	0.00027	20.4	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
RepB-RCR_reg	PF10723.4	gi|297620785|ref|YP_003708922.1|	-	0.0051	16.5	0.2	0.059	13.0	0.0	2.0	2	0	0	2	2	2	1	Replication	regulatory	protein	RepB
HTH_29	PF13551.1	gi|297620785|ref|YP_003708922.1|	-	0.023	14.8	0.0	0.026	14.6	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
MTBP_C	PF14920.1	gi|297620785|ref|YP_003708922.1|	-	0.093	12.2	0.1	0.097	12.1	0.0	1.1	1	0	0	1	1	1	0	MDM2-binding
DivIC	PF04977.10	gi|297620785|ref|YP_003708922.1|	-	0.27	10.7	1.9	0.36	10.3	1.3	1.2	1	0	0	1	1	1	0	Septum	formation	initiator
DDE_Tnp_1	PF01609.16	gi|297620786|ref|YP_003708923.1|	-	2.2e-15	56.8	0.1	2.7e-15	56.4	0.1	1.1	1	0	0	1	1	1	1	Transposase	DDE	domain
DUF4096	PF13340.1	gi|297620788|ref|YP_003708925.1|	-	5.8e-30	102.9	0.9	7.3e-30	102.6	0.6	1.1	1	0	0	1	1	1	1	Putative	transposase	of	IS4/5	family	(DUF4096)
DUF4471	PF14740.1	gi|297620788|ref|YP_003708925.1|	-	0.049	12.8	0.4	0.083	12.1	0.2	1.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4471)
Transposase_mut	PF00872.13	gi|297620789|ref|YP_003708926.1|	-	2.3e-101	339.1	0.0	2.7e-101	338.8	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.4	gi|297620789|ref|YP_003708926.1|	-	1.3e-10	41.2	0.0	4.1e-10	39.6	0.0	1.9	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.1	gi|297620789|ref|YP_003708926.1|	-	0.013	15.4	0.2	0.16	11.9	0.1	2.7	2	1	1	3	3	3	0	DDE	domain
Ribosomal_L44	PF00935.14	gi|297620791|ref|YP_003708928.1|	-	0.25	11.3	3.4	0.49	10.4	2.4	1.5	1	0	0	1	1	1	0	Ribosomal	protein	L44
DDE_Tnp_IS1	PF03400.8	gi|297620793|ref|YP_003708930.1|	-	2e-07	31.1	0.1	2e-07	31.1	0.1	1.1	1	0	0	1	1	1	1	IS1	transposase
rve_3	PF13683.1	gi|297620793|ref|YP_003708930.1|	-	0.0012	18.3	0.1	0.0016	17.9	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
DDE_Tnp_IS1	PF03400.8	gi|297620794|ref|YP_003708931.1|	-	1.8e-11	44.2	0.1	3.3e-11	43.3	0.1	1.6	1	1	0	1	1	1	1	IS1	transposase
Zn_Tnp_IS1	PF03811.8	gi|297620794|ref|YP_003708931.1|	-	4.1e-05	22.9	3.7	6.3e-05	22.3	2.6	1.3	1	0	0	1	1	1	1	InsA	N-terminal	domain
DDE_Tnp_IS240	PF13610.1	gi|297620794|ref|YP_003708931.1|	-	0.0013	18.6	0.0	0.0031	17.4	0.0	1.6	2	0	0	2	2	2	1	DDE	domain
DUF2387	PF09526.5	gi|297620794|ref|YP_003708931.1|	-	0.062	13.2	0.4	0.14	12.1	0.3	1.5	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
DNA_ligase_ZBD	PF03119.11	gi|297620794|ref|YP_003708931.1|	-	0.2	11.4	2.6	0.19	11.4	0.3	2.0	1	1	1	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-ISL3	PF14690.1	gi|297620794|ref|YP_003708931.1|	-	0.27	11.2	4.5	0.58	10.2	0.3	2.7	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Rad50_zn_hook	PF04423.9	gi|297620794|ref|YP_003708931.1|	-	0.53	9.7	2.7	0.56	9.7	0.2	2.5	2	1	0	2	2	2	0	Rad50	zinc	hook	motif
zf-H2C2_2	PF13465.1	gi|297620794|ref|YP_003708931.1|	-	0.94	9.8	3.6	2.6	8.5	0.1	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
Ribosomal_S14	PF00253.16	gi|297620794|ref|YP_003708931.1|	-	1	8.8	3.2	0.44	9.9	0.2	1.9	2	0	0	2	2	2	0	Ribosomal	protein	S14p/S29e
ABC_tran	PF00005.22	gi|297620795|ref|YP_003708932.1|	-	3.6e-54	182.7	1.4	2.5e-27	95.8	0.0	3.3	4	0	0	4	4	3	2	ABC	transporter
AAA_21	PF13304.1	gi|297620795|ref|YP_003708932.1|	-	3.2e-21	76.5	7.5	0.00019	21.5	0.1	4.2	2	2	2	4	4	4	4	AAA	domain
Miro	PF08477.8	gi|297620795|ref|YP_003708932.1|	-	3.7e-07	30.6	0.4	0.028	14.9	0.0	3.0	3	0	0	3	3	2	2	Miro-like	protein
SMC_N	PF02463.14	gi|297620795|ref|YP_003708932.1|	-	6.3e-07	28.8	1.1	1.1	8.3	0.0	4.3	3	1	1	4	4	4	1	RecF/RecN/SMC	N	terminal	domain
DUF258	PF03193.11	gi|297620795|ref|YP_003708932.1|	-	1.1e-06	27.9	1.4	0.0061	15.7	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|297620795|ref|YP_003708932.1|	-	1.2e-06	27.9	2.3	0.0089	15.5	0.1	2.7	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_17	PF13207.1	gi|297620795|ref|YP_003708932.1|	-	5.5e-06	27.2	0.5	0.087	13.6	0.0	3.0	2	1	0	2	2	2	2	AAA	domain
AAA_18	PF13238.1	gi|297620795|ref|YP_003708932.1|	-	2.4e-05	24.6	2.5	0.11	12.7	0.1	3.3	2	2	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|297620795|ref|YP_003708932.1|	-	8.7e-05	22.0	0.4	0.077	12.3	0.0	2.9	2	1	0	2	2	2	1	AAA	domain
ArgK	PF03308.11	gi|297620795|ref|YP_003708932.1|	-	0.00014	20.7	2.1	0.007	15.1	0.0	2.4	2	0	0	2	2	2	1	ArgK	protein
AAA_16	PF13191.1	gi|297620795|ref|YP_003708932.1|	-	0.00033	20.6	0.1	0.31	11.0	0.0	2.8	2	1	0	2	2	2	1	AAA	ATPase	domain
ATP-synt_ab	PF00006.20	gi|297620795|ref|YP_003708932.1|	-	0.00035	20.1	0.0	0.2	11.1	0.0	2.3	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
MobB	PF03205.9	gi|297620795|ref|YP_003708932.1|	-	0.00044	19.9	0.6	0.31	10.7	0.3	2.7	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
KAP_NTPase	PF07693.9	gi|297620795|ref|YP_003708932.1|	-	0.00046	19.2	0.0	0.037	13.0	0.0	2.5	2	2	0	2	2	2	1	KAP	family	P-loop	domain
NACHT	PF05729.7	gi|297620795|ref|YP_003708932.1|	-	0.00052	19.7	0.7	0.4	10.3	0.0	2.7	2	0	0	2	2	2	1	NACHT	domain
T2SE	PF00437.15	gi|297620795|ref|YP_003708932.1|	-	0.00064	18.6	0.3	0.048	12.5	0.0	2.4	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
MMR_HSR1	PF01926.18	gi|297620795|ref|YP_003708932.1|	-	0.00066	19.6	0.1	1.5	8.8	0.0	2.7	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
AAA_30	PF13604.1	gi|297620795|ref|YP_003708932.1|	-	0.0008	19.0	0.7	0.38	10.3	0.1	2.7	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|297620795|ref|YP_003708932.1|	-	0.00099	19.3	0.7	0.84	9.8	0.0	3.5	4	0	0	4	4	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Dynamin_N	PF00350.18	gi|297620795|ref|YP_003708932.1|	-	0.0013	18.6	0.4	0.65	9.7	0.0	2.9	2	1	0	2	2	2	1	Dynamin	family
AAA_23	PF13476.1	gi|297620795|ref|YP_003708932.1|	-	0.0013	19.1	24.3	0.039	14.2	0.4	3.6	2	1	0	3	3	3	2	AAA	domain
AAA_33	PF13671.1	gi|297620795|ref|YP_003708932.1|	-	0.0013	18.6	0.4	3.2	7.6	0.0	3.1	3	0	0	3	3	3	1	AAA	domain
AAA_13	PF13166.1	gi|297620795|ref|YP_003708932.1|	-	0.002	16.6	4.1	1.2	7.5	0.0	3.2	3	0	0	3	3	3	2	AAA	domain
AAA_28	PF13521.1	gi|297620795|ref|YP_003708932.1|	-	0.0022	17.9	0.0	3.8	7.4	0.0	3.0	2	0	0	2	2	2	0	AAA	domain
PduV-EutP	PF10662.4	gi|297620795|ref|YP_003708932.1|	-	0.0038	16.7	0.9	1.3	8.5	0.2	2.4	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_10	PF12846.2	gi|297620795|ref|YP_003708932.1|	-	0.0049	16.3	0.9	0.67	9.3	0.0	2.8	3	0	0	3	3	2	1	AAA-like	domain
AAA_14	PF13173.1	gi|297620795|ref|YP_003708932.1|	-	0.0052	16.6	0.5	5.9	6.8	0.0	3.7	4	0	0	4	4	3	0	AAA	domain
RNA_helicase	PF00910.17	gi|297620795|ref|YP_003708932.1|	-	0.0054	16.8	0.3	3.9	7.7	0.0	2.7	2	0	0	2	2	2	0	RNA	helicase
ABC_tran_2	PF12848.2	gi|297620795|ref|YP_003708932.1|	-	0.0055	16.5	1.8	0.0055	16.5	1.3	2.6	3	0	0	3	3	2	1	ABC	transporter
AAA_15	PF13175.1	gi|297620795|ref|YP_003708932.1|	-	0.0067	15.5	6.0	0.23	10.4	0.0	3.3	4	0	0	4	4	4	1	AAA	ATPase	domain
Mg_chelatase	PF01078.16	gi|297620795|ref|YP_003708932.1|	-	0.0081	15.3	0.8	2.6	7.1	0.0	2.7	3	0	0	3	3	3	1	Magnesium	chelatase,	subunit	ChlI
AAA_24	PF13479.1	gi|297620795|ref|YP_003708932.1|	-	0.013	15.0	2.4	0.87	9.1	0.1	3.0	3	0	0	3	3	3	0	AAA	domain
AAA_19	PF13245.1	gi|297620795|ref|YP_003708932.1|	-	0.021	14.5	0.2	2.9	7.6	0.0	2.6	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA_22	PF13401.1	gi|297620795|ref|YP_003708932.1|	-	0.023	14.8	6.2	1.2	9.3	0.1	3.6	3	2	0	3	3	2	0	AAA	domain
AAA_5	PF07728.9	gi|297620795|ref|YP_003708932.1|	-	0.028	14.1	1.4	1.3	8.7	0.0	2.6	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
cobW	PF02492.14	gi|297620795|ref|YP_003708932.1|	-	0.037	13.4	2.4	4.7	6.6	0.1	2.5	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
DUF87	PF01935.12	gi|297620795|ref|YP_003708932.1|	-	0.039	13.7	8.1	0.056	13.2	0.0	3.2	3	1	1	4	4	3	0	Domain	of	unknown	function	DUF87
NTPase_1	PF03266.10	gi|297620795|ref|YP_003708932.1|	-	0.04	13.6	0.8	6.4	6.4	0.3	3.2	3	0	0	3	3	3	0	NTPase
Glyco_hydro_3	PF00933.16	gi|297620795|ref|YP_003708932.1|	-	0.044	12.7	0.0	0.067	12.1	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	3	N	terminal	domain
SbcCD_C	PF13558.1	gi|297620795|ref|YP_003708932.1|	-	0.087	12.7	0.8	30	4.6	0.0	3.5	2	2	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
Arf	PF00025.16	gi|297620795|ref|YP_003708932.1|	-	0.096	11.9	1.3	4.6	6.4	0.0	2.7	2	0	0	2	2	2	0	ADP-ribosylation	factor	family
UPF0079	PF02367.12	gi|297620795|ref|YP_003708932.1|	-	0.11	12.1	1.7	6	6.5	0.0	2.4	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
Pox_A32	PF04665.7	gi|297620795|ref|YP_003708932.1|	-	0.17	11.1	1.2	1.5	8.0	0.1	2.2	2	0	0	2	2	2	0	Poxvirus	A32	protein
NB-ARC	PF00931.17	gi|297620795|ref|YP_003708932.1|	-	9.9	4.9	8.2	8.6	5.1	0.7	2.9	3	0	0	3	3	3	0	NB-ARC	domain
LysR_substrate	PF03466.15	gi|297620796|ref|YP_003708933.1|	-	1.1e-31	109.5	0.0	1.4e-31	109.2	0.0	1.1	1	0	0	1	1	1	1	LysR	substrate	binding	domain
HTH_1	PF00126.22	gi|297620796|ref|YP_003708933.1|	-	3.6e-18	65.0	1.1	7.7e-18	63.9	0.8	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
MarR_2	PF12802.2	gi|297620796|ref|YP_003708933.1|	-	0.0013	18.3	1.1	0.0077	15.8	0.2	2.4	2	0	0	2	2	2	1	MarR	family
HTH_30	PF13556.1	gi|297620796|ref|YP_003708933.1|	-	0.0036	16.8	0.0	0.0085	15.6	0.0	1.6	1	0	0	1	1	1	1	PucR	C-terminal	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|297620796|ref|YP_003708933.1|	-	0.0042	16.9	0.2	0.21	11.5	0.0	2.6	3	0	0	3	3	3	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_11	PF08279.7	gi|297620796|ref|YP_003708933.1|	-	0.014	15.0	0.5	0.035	13.7	0.1	1.8	2	0	0	2	2	2	0	HTH	domain
HTH_5	PF01022.15	gi|297620796|ref|YP_003708933.1|	-	0.056	13.1	0.2	1.8	8.2	0.0	2.6	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|297620796|ref|YP_003708933.1|	-	0.096	12.0	0.4	0.4	10.1	0.1	2.2	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
MFS_1	PF07690.11	gi|297620797|ref|YP_003708934.1|	-	6.2e-46	156.7	29.9	1e-45	156.0	20.7	1.3	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|297620797|ref|YP_003708934.1|	-	9.8e-10	37.5	7.4	9.8e-10	37.5	5.1	3.0	1	1	0	2	2	2	1	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|297620797|ref|YP_003708934.1|	-	1.6e-05	23.2	12.2	2.7e-05	22.5	8.4	1.4	1	1	0	1	1	1	1	Transmembrane	secretion	effector
Phage_holin_3	PF05106.7	gi|297620797|ref|YP_003708934.1|	-	0.28	11.1	3.7	3.2	7.8	1.2	2.6	2	0	0	2	2	2	0	Phage	holin	family	(Lysis	protein	S)
DUF1418	PF07214.7	gi|297620797|ref|YP_003708934.1|	-	1.4	8.6	5.9	4.7	6.8	0.1	3.3	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1418)
YrhC	PF14143.1	gi|297620797|ref|YP_003708934.1|	-	2.1	8.3	8.2	1.4	8.9	1.3	3.6	3	0	0	3	3	3	0	YrhC-like	protein
IncA	PF04156.9	gi|297620797|ref|YP_003708934.1|	-	5.1	6.6	0.0	5.1	6.6	0.0	4.2	5	1	1	6	6	6	0	IncA	protein
Cyclase	PF04199.8	gi|297620798|ref|YP_003708935.1|	-	4.3e-29	101.3	0.0	5e-29	101.1	0.0	1.1	1	0	0	1	1	1	1	Putative	cyclase
DUF21	PF01595.15	gi|297620799|ref|YP_003708936.1|	-	7.6e-37	126.3	1.1	1e-36	125.9	0.7	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF21
CBS	PF00571.23	gi|297620799|ref|YP_003708936.1|	-	7.3e-11	41.6	0.0	7.3e-05	22.4	0.0	2.4	2	0	0	2	2	2	2	CBS	domain
RtcB	PF01139.12	gi|297620800|ref|YP_003708937.1|	-	6.2e-128	427.3	0.0	7e-128	427.1	0.0	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
Cytochrome_CBB3	PF13442.1	gi|297620800|ref|YP_003708937.1|	-	0.0062	16.6	0.0	0.54	10.4	0.0	2.6	2	0	0	2	2	2	1	Cytochrome	C	oxidase,	cbb3-type,	subunit	III
Archease	PF01951.11	gi|297620801|ref|YP_003708938.1|	-	9.7e-05	22.3	0.2	0.0026	17.7	0.1	2.1	2	0	0	2	2	2	2	Archease	protein	family	(MTH1598/TM1083)
NUDIX	PF00293.23	gi|297620802|ref|YP_003708939.1|	-	4.7e-13	48.9	0.0	6.6e-13	48.4	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
NUDIX	PF00293.23	gi|297620803|ref|YP_003708940.1|	-	6e-21	74.5	0.0	7.6e-21	74.1	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.1	gi|297620803|ref|YP_003708940.1|	-	0.002	17.5	0.0	0.0038	16.6	0.0	1.5	1	1	0	1	1	1	1	NUDIX	domain
ADH_zinc_N	PF00107.21	gi|297620804|ref|YP_003708941.1|	-	1.9e-10	40.3	0.0	3.2e-10	39.6	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.7	gi|297620804|ref|YP_003708941.1|	-	5.5e-10	38.9	0.0	1.5e-07	31.1	0.0	2.4	1	1	1	2	2	2	2	Alcohol	dehydrogenase	GroES-like	domain
Phage_min_tail	PF05939.8	gi|297620806|ref|YP_003708943.1|	-	0.033	14.1	0.3	1.3	9.0	0.0	2.8	3	0	0	3	3	3	0	Phage	minor	tail	protein
DUF3649	PF12365.3	gi|297620806|ref|YP_003708943.1|	-	0.79	9.2	3.2	1.4	8.5	2.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3649)
DUF2951	PF11166.3	gi|297620807|ref|YP_003708944.1|	-	4.8	7.0	7.5	0.46	10.3	0.7	2.5	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2951)
Lysine_decarbox	PF03641.9	gi|297620808|ref|YP_003708945.1|	-	0.0019	18.0	0.0	0.0039	16.9	0.0	1.5	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
DUF1622	PF07784.6	gi|297620810|ref|YP_003708947.1|	-	1.4e-25	88.7	1.1	1.6e-25	88.5	0.1	1.5	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1622)
UPF0160	PF03690.8	gi|297620811|ref|YP_003708948.1|	-	1.7e-67	228.1	0.0	2.9e-67	227.3	0.0	1.3	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0160)
HIT	PF01230.18	gi|297620812|ref|YP_003708949.1|	-	3.8e-26	91.4	0.0	4.5e-26	91.2	0.0	1.1	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.3	gi|297620812|ref|YP_003708949.1|	-	9.4e-25	87.1	0.0	1.1e-24	86.8	0.0	1.0	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
GalP_UDP_tr_C	PF02744.12	gi|297620812|ref|YP_003708949.1|	-	0.016	14.7	0.0	0.019	14.5	0.0	1.1	1	0	0	1	1	1	0	Galactose-1-phosphate	uridyl	transferase,	C-terminal	domain
Isochorismatase	PF00857.15	gi|297620813|ref|YP_003708950.1|	-	1.6e-27	96.5	0.0	2e-27	96.2	0.0	1.1	1	0	0	1	1	1	1	Isochorismatase	family
HEAT_2	PF13646.1	gi|297620814|ref|YP_003708951.1|	-	1.1e-23	83.2	15.2	2.8e-07	30.7	0.1	6.3	3	2	3	6	6	6	5	HEAT	repeats
HEAT	PF02985.17	gi|297620814|ref|YP_003708951.1|	-	1.6e-10	40.1	6.3	0.012	15.6	0.0	7.6	8	0	0	8	8	8	2	HEAT	repeat
HEAT_EZ	PF13513.1	gi|297620814|ref|YP_003708951.1|	-	0.00088	19.6	15.7	0.017	15.6	0.3	6.4	5	2	2	7	7	7	1	HEAT-like	repeat
Adaptin_N	PF01602.15	gi|297620814|ref|YP_003708951.1|	-	0.0016	16.8	1.8	1.1	7.5	0.0	2.9	2	1	0	3	3	3	2	Adaptin	N	terminal	region
Cohesin_HEAT	PF12765.2	gi|297620814|ref|YP_003708951.1|	-	0.0029	17.5	1.4	0.63	10.0	0.4	3.4	3	0	0	3	3	3	1	HEAT	repeat	associated	with	sister	chromatid	cohesion
IFRD	PF05004.8	gi|297620814|ref|YP_003708951.1|	-	0.0059	15.7	0.2	0.021	13.9	0.0	2.0	1	1	0	1	1	1	1	Interferon-related	developmental	regulator	(IFRD)
NMT1	PF09084.6	gi|297620815|ref|YP_003708952.1|	-	7.9e-54	182.5	0.0	1.2e-53	181.9	0.0	1.3	1	0	0	1	1	1	1	NMT1/THI5	like
BPD_transp_1	PF00528.17	gi|297620815|ref|YP_003708952.1|	-	2.5e-22	79.3	14.3	5.5e-22	78.1	9.9	1.5	1	0	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_3	PF00497.15	gi|297620815|ref|YP_003708952.1|	-	0.0032	16.7	0.0	0.0076	15.5	0.0	1.6	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
VitK2_biosynth	PF02621.9	gi|297620815|ref|YP_003708952.1|	-	0.023	13.9	0.0	0.062	12.4	0.0	1.7	2	0	0	2	2	2	0	Menaquinone	biosynthesis
NMT1_2	PF13379.1	gi|297620815|ref|YP_003708952.1|	-	0.047	13.0	0.0	0.07	12.5	0.0	1.3	1	0	0	1	1	1	0	NMT1-like	family
CotJB	PF12652.2	gi|297620816|ref|YP_003708953.1|	-	0.18	11.9	4.7	8.9	6.4	0.1	4.3	3	1	1	4	4	4	0	CotJB	protein
YjfB_motility	PF14070.1	gi|297620816|ref|YP_003708953.1|	-	7.3	6.4	6.6	3.2	7.6	0.1	3.3	4	0	0	4	4	4	0	Putative	motility	protein
ABC_tran	PF00005.22	gi|297620817|ref|YP_003708954.1|	-	6.4e-25	88.0	0.1	1.4e-24	86.9	0.1	1.6	1	1	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297620817|ref|YP_003708954.1|	-	4.5e-17	62.9	8.1	3.6e-12	46.8	1.5	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|297620817|ref|YP_003708954.1|	-	7.1e-08	31.9	3.9	2.2e-05	23.7	0.6	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_16	PF13191.1	gi|297620817|ref|YP_003708954.1|	-	1.4e-06	28.4	0.1	2.3e-06	27.7	0.1	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|297620817|ref|YP_003708954.1|	-	1.8e-06	28.1	0.2	2.9e-06	27.4	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|297620817|ref|YP_003708954.1|	-	2.3e-06	27.0	1.0	0.00064	19.0	0.1	2.1	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|297620817|ref|YP_003708954.1|	-	4.9e-06	27.3	0.2	6.8e-06	26.8	0.1	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|297620817|ref|YP_003708954.1|	-	0.0004	20.6	0.8	0.0024	18.1	0.6	2.0	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|297620817|ref|YP_003708954.1|	-	0.001	18.3	0.1	0.002	17.3	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_33	PF13671.1	gi|297620817|ref|YP_003708954.1|	-	0.0012	18.6	0.0	0.0043	16.9	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|297620817|ref|YP_003708954.1|	-	0.0018	17.7	0.2	0.0038	16.7	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_13	PF13166.1	gi|297620817|ref|YP_003708954.1|	-	0.0035	15.9	0.6	0.023	13.2	0.1	1.9	2	0	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|297620817|ref|YP_003708954.1|	-	0.0044	16.6	1.0	0.011	15.3	0.0	1.9	2	0	0	2	2	2	1	NACHT	domain
Pox_A32	PF04665.7	gi|297620817|ref|YP_003708954.1|	-	0.014	14.7	1.3	0.066	12.5	0.1	2.0	2	1	0	2	2	2	0	Poxvirus	A32	protein
UPF0079	PF02367.12	gi|297620817|ref|YP_003708954.1|	-	0.014	14.9	0.1	0.024	14.2	0.1	1.3	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA	PF00004.24	gi|297620817|ref|YP_003708954.1|	-	0.015	15.4	0.0	0.049	13.8	0.0	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|297620817|ref|YP_003708954.1|	-	0.017	14.5	0.9	0.042	13.2	0.6	1.9	1	1	0	1	1	1	0	AAA	domain
SbcCD_C	PF13558.1	gi|297620817|ref|YP_003708954.1|	-	0.021	14.7	0.0	0.042	13.7	0.0	1.6	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_30	PF13604.1	gi|297620817|ref|YP_003708954.1|	-	0.021	14.3	0.1	0.031	13.8	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|297620817|ref|YP_003708954.1|	-	0.023	14.4	0.0	0.055	13.2	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_10	PF12846.2	gi|297620817|ref|YP_003708954.1|	-	0.03	13.7	0.3	0.1	12.0	0.1	1.8	2	0	0	2	2	2	0	AAA-like	domain
NB-ARC	PF00931.17	gi|297620817|ref|YP_003708954.1|	-	0.031	13.1	0.0	0.044	12.6	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
AAA_5	PF07728.9	gi|297620817|ref|YP_003708954.1|	-	0.04	13.6	0.2	0.1	12.3	0.1	1.8	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
KAP_NTPase	PF07693.9	gi|297620817|ref|YP_003708954.1|	-	0.055	12.4	0.0	0.06	12.3	0.0	1.2	1	1	0	1	1	1	0	KAP	family	P-loop	domain
ATP_bind_1	PF03029.12	gi|297620817|ref|YP_003708954.1|	-	0.071	12.6	0.0	0.31	10.5	0.0	2.0	2	1	1	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
FtsK_SpoIIIE	PF01580.13	gi|297620817|ref|YP_003708954.1|	-	0.11	12.0	0.1	0.18	11.2	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
T2SE	PF00437.15	gi|297620817|ref|YP_003708954.1|	-	0.11	11.3	0.0	0.17	10.7	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_28	PF13521.1	gi|297620817|ref|YP_003708954.1|	-	0.11	12.3	0.4	0.29	11.0	0.2	1.9	1	1	1	2	2	2	0	AAA	domain
NTPase_1	PF03266.10	gi|297620817|ref|YP_003708954.1|	-	0.12	12.0	0.0	1.8	8.2	0.0	2.3	2	0	0	2	2	2	0	NTPase
AAA_23	PF13476.1	gi|297620817|ref|YP_003708954.1|	-	0.13	12.5	4.0	0.34	11.2	2.8	2.0	1	1	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|297620817|ref|YP_003708954.1|	-	0.15	11.7	0.1	0.27	10.9	0.1	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
KaiC	PF06745.8	gi|297620817|ref|YP_003708954.1|	-	0.16	11.0	0.3	9.4	5.2	0.0	2.2	2	0	0	2	2	2	0	KaiC
DUF87	PF01935.12	gi|297620817|ref|YP_003708954.1|	-	2	8.1	4.6	0.82	9.4	0.5	2.1	2	1	0	2	2	2	0	Domain	of	unknown	function	DUF87
Peptidase_M24	PF00557.19	gi|297620818|ref|YP_003708955.1|	-	3.3e-34	118.2	0.0	4.6e-34	117.8	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Trp_Tyr_perm	PF03222.8	gi|297620819|ref|YP_003708956.1|	-	2.5e-86	289.9	35.0	2.9e-86	289.7	24.3	1.0	1	0	0	1	1	1	1	Tryptophan/tyrosine	permease	family
Aa_trans	PF01490.13	gi|297620819|ref|YP_003708956.1|	-	3e-06	25.9	33.7	2.6e-05	22.9	23.4	2.4	1	1	0	1	1	1	1	Transmembrane	amino	acid	transporter	protein
YfzA	PF14118.1	gi|297620819|ref|YP_003708956.1|	-	0.057	13.5	0.0	0.057	13.5	0.0	3.1	4	0	0	4	4	4	0	YfzA-like	protein
SufE	PF02657.10	gi|297620820|ref|YP_003708957.1|	-	1.2e-31	108.9	0.0	1.4e-31	108.7	0.0	1.0	1	0	0	1	1	1	1	Fe-S	metabolism	associated	domain
Xin	PF08043.7	gi|297620820|ref|YP_003708957.1|	-	0.14	11.8	0.6	7.4	6.5	0.0	3.4	4	0	0	4	4	4	0	Xin	repeat
eIF-1a	PF01176.14	gi|297620821|ref|YP_003708958.1|	-	2.2e-23	81.4	0.0	2.4e-23	81.3	0.0	1.0	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
GTP_EFTU	PF00009.22	gi|297620822|ref|YP_003708959.1|	-	1.8e-59	200.3	0.1	2.4e-59	199.9	0.1	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|297620822|ref|YP_003708959.1|	-	3.2e-33	113.8	0.1	2.2e-32	111.1	0.0	2.2	2	0	0	2	2	2	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|297620822|ref|YP_003708959.1|	-	1.4e-18	66.7	1.4	1.4e-18	66.7	1.0	2.1	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|297620822|ref|YP_003708959.1|	-	1.2e-05	25.1	0.0	2.3e-05	24.3	0.0	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
GTP_EFTU_D4	PF14578.1	gi|297620822|ref|YP_003708959.1|	-	0.0001	21.8	1.4	0.00026	20.5	0.3	2.1	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	4
Miro	PF08477.8	gi|297620822|ref|YP_003708959.1|	-	0.0008	19.8	0.0	0.0014	19.1	0.0	1.4	1	0	0	1	1	1	1	Miro-like	protein
SecE	PF00584.15	gi|297620823|ref|YP_003708960.1|	-	3.4e-15	55.3	2.0	4.6e-15	54.9	1.4	1.1	1	0	0	1	1	1	1	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
DUF3040	PF11239.3	gi|297620823|ref|YP_003708960.1|	-	0.013	15.5	0.1	0.016	15.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3040)
NusG	PF02357.14	gi|297620824|ref|YP_003708961.1|	-	5.2e-22	77.8	0.1	1.3e-21	76.5	0.0	1.7	2	0	0	2	2	2	1	Transcription	termination	factor	nusG
KOW	PF00467.24	gi|297620824|ref|YP_003708961.1|	-	5.7e-06	25.8	2.1	2e-05	24.1	1.5	2.0	1	0	0	1	1	1	1	KOW	motif
AF0941-like	PF14591.1	gi|297620824|ref|YP_003708961.1|	-	0.035	14.1	2.3	0.99	9.4	0.1	2.3	2	0	0	2	2	2	0	AF0941-like
Ribosomal_L11_N	PF03946.9	gi|297620825|ref|YP_003708962.1|	-	3e-31	106.6	1.1	5.1e-31	105.9	0.5	1.6	2	0	0	2	2	2	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.14	gi|297620825|ref|YP_003708962.1|	-	2.5e-27	94.8	0.4	4.1e-27	94.1	0.2	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L11,	RNA	binding	domain
Cache_2	PF08269.6	gi|297620825|ref|YP_003708962.1|	-	0.12	12.3	0.1	0.2	11.6	0.1	1.4	1	0	0	1	1	1	0	Cache	domain
Ribosomal_L1	PF00687.16	gi|297620826|ref|YP_003708963.1|	-	1.2e-48	165.4	0.0	1.4e-48	165.1	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
PHP_C	PF13263.1	gi|297620826|ref|YP_003708963.1|	-	0.021	14.3	0.0	0.65	9.5	0.0	2.5	2	0	0	2	2	2	0	PHP-associated
Ribosomal_L10	PF00466.15	gi|297620827|ref|YP_003708964.1|	-	1.3e-16	60.3	0.0	1.7e-16	59.9	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L10
Ribosomal_L12	PF00542.14	gi|297620828|ref|YP_003708965.1|	-	2.5e-27	94.6	10.1	2.5e-27	94.6	7.0	2.2	2	1	0	2	2	2	1	Ribosomal	protein	L7/L12	C-terminal	domain
DUF2321	PF10083.4	gi|297620828|ref|YP_003708965.1|	-	0.078	12.4	1.2	1.6	8.1	0.1	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
Herpes_BLRF2	PF05812.7	gi|297620828|ref|YP_003708965.1|	-	2.1	8.1	6.0	4.7	7.0	4.2	1.7	1	1	0	1	1	1	0	Herpesvirus	BLRF2	protein
RNA_pol_Rpb2_6	PF00562.23	gi|297620829|ref|YP_003708966.1|	-	3.1e-157	523.2	0.1	4.3e-155	516.2	0.1	2.2	2	0	0	2	2	2	2	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_3	PF04565.11	gi|297620829|ref|YP_003708966.1|	-	1.7e-28	98.1	0.0	3.4e-28	97.2	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_7	PF04560.15	gi|297620829|ref|YP_003708966.1|	-	2.8e-28	98.0	0.0	9e-28	96.3	0.0	2.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_1	PF04563.10	gi|297620829|ref|YP_003708966.1|	-	7.7e-24	83.7	0.0	1.8e-23	82.5	0.0	1.6	1	1	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_45	PF10385.4	gi|297620829|ref|YP_003708966.1|	-	1.4e-21	76.0	0.7	1.1e-20	73.1	0.3	2.6	2	0	0	2	2	2	1	RNA	polymerase	beta	subunit	external	1	domain
RNA_pol_Rpb2_2	PF04561.9	gi|297620829|ref|YP_003708966.1|	-	6.5e-20	71.3	0.7	1.1e-14	54.3	0.1	2.4	2	0	0	2	2	2	2	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb1_1	PF04997.7	gi|297620830|ref|YP_003708967.1|	-	9e-96	321.0	0.0	1.8e-95	320.0	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_5	PF04998.12	gi|297620830|ref|YP_003708967.1|	-	4.5e-78	262.2	0.4	9.5e-78	261.2	0.3	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
RNA_pol_Rpb1_2	PF00623.15	gi|297620830|ref|YP_003708967.1|	-	5.4e-51	172.8	0.0	7.9e-50	169.0	0.0	2.5	1	1	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.13	gi|297620830|ref|YP_003708967.1|	-	5.9e-25	87.8	0.0	2e-24	86.1	0.0	2.0	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.12	gi|297620830|ref|YP_003708967.1|	-	4.9e-12	45.5	0.0	1.2e-11	44.2	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
Apocytochr_F_C	PF01333.14	gi|297620830|ref|YP_003708967.1|	-	4.8e-05	23.1	3.1	0.23	11.2	0.2	3.5	3	0	0	3	3	3	2	Apocytochrome	F,	C-terminal
Biotin_lipoyl_2	PF13533.1	gi|297620830|ref|YP_003708967.1|	-	0.0012	18.4	1.1	1.4	8.6	0.1	3.5	3	0	0	3	3	3	1	Biotin-lipoyl	like
RnfC_N	PF13375.1	gi|297620830|ref|YP_003708967.1|	-	0.0013	18.3	0.1	0.9	9.2	0.0	3.1	2	0	0	2	2	2	2	RnfC	Barrel	sandwich	hybrid	domain
Peptidase_M23	PF01551.17	gi|297620830|ref|YP_003708967.1|	-	0.0021	18.0	1.5	0.11	12.5	0.1	3.7	4	0	0	4	4	4	1	Peptidase	family	M23
TLC	PF03219.9	gi|297620832|ref|YP_003708969.1|	-	3.4e-113	378.7	26.3	4.5e-113	378.3	18.2	1.1	1	0	0	1	1	1	1	TLC	ATP/ADP	transporter
Transaldolase	PF00923.14	gi|297620833|ref|YP_003708970.1|	-	1.3e-100	336.3	0.0	1.4e-100	336.1	0.0	1.0	1	0	0	1	1	1	1	Transaldolase
Cluap1	PF10234.4	gi|297620833|ref|YP_003708970.1|	-	0.07	12.3	0.3	0.15	11.2	0.2	1.5	1	0	0	1	1	1	0	Clusterin-associated	protein-1
zinc_ribbon_4	PF13717.1	gi|297620834|ref|YP_003708971.1|	-	0.14	11.8	0.7	0.2	11.3	0.0	1.6	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF3417	PF11897.3	gi|297620835|ref|YP_003708972.1|	-	0.013	15.4	0.1	0.013	15.4	0.1	3.1	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF3417)
V-ATPase_G	PF03179.10	gi|297620840|ref|YP_003708977.1|	-	3.7e-05	23.9	10.7	4.8e-05	23.6	6.9	1.5	1	1	0	1	1	1	1	Vacuolar	(H+)-ATPase	G	subunit
HrpE	PF06188.7	gi|297620840|ref|YP_003708977.1|	-	4.7e-05	23.2	8.4	8.2e-05	22.4	5.9	1.4	1	1	0	1	1	1	1	HrpE/YscL/FliH	and	V-type	ATPase	subunit	E
ATP-synt_B	PF00430.13	gi|297620840|ref|YP_003708977.1|	-	0.0013	18.5	15.1	0.0034	17.1	10.4	1.8	1	1	0	1	1	1	1	ATP	synthase	B/B'	CF(0)
Herpes_UL25	PF01499.11	gi|297620840|ref|YP_003708977.1|	-	0.0066	14.8	1.8	0.0069	14.7	1.3	1.2	1	0	0	1	1	1	1	Herpesvirus	UL25	family
DUF883	PF05957.8	gi|297620840|ref|YP_003708977.1|	-	0.0095	16.3	5.8	0.039	14.3	3.9	2.1	1	1	1	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF883)
DivIVA	PF05103.8	gi|297620840|ref|YP_003708977.1|	-	0.021	14.8	10.7	0.027	14.5	6.8	1.7	1	1	0	1	1	1	0	DivIVA	protein
DUF445	PF04286.7	gi|297620840|ref|YP_003708977.1|	-	0.064	12.7	6.9	0.077	12.5	4.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
KfrA_N	PF11740.3	gi|297620840|ref|YP_003708977.1|	-	0.083	13.3	10.5	0.094	13.1	5.9	1.9	2	0	0	2	2	2	0	Plasmid	replication	region	DNA-binding	N-term
DUF2120	PF09893.4	gi|297620840|ref|YP_003708977.1|	-	0.091	12.7	1.6	0.14	12.0	0.8	1.6	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
DRIM	PF07539.7	gi|297620840|ref|YP_003708977.1|	-	0.13	11.6	2.4	2.8	7.3	0.5	2.4	2	0	0	2	2	2	0	Down-regulated	in	metastasis
DUF3347	PF11827.3	gi|297620840|ref|YP_003708977.1|	-	0.28	11.1	5.0	0.54	10.2	2.3	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3347)
HsdM_N	PF12161.3	gi|297620840|ref|YP_003708977.1|	-	0.32	11.4	2.9	5	7.5	2.0	2.3	1	1	0	1	1	1	0	HsdM	N-terminal	domain
PEP-utilisers_N	PF05524.8	gi|297620840|ref|YP_003708977.1|	-	0.37	10.6	5.7	0.24	11.2	2.5	1.8	1	1	1	2	2	2	0	PEP-utilising	enzyme,	N-terminal
vATP-synt_E	PF01991.13	gi|297620840|ref|YP_003708977.1|	-	0.52	9.5	17.4	1.3	8.2	12.0	1.7	1	1	0	1	1	1	0	ATP	synthase	(E/31	kDa)	subunit
OmpH	PF03938.9	gi|297620840|ref|YP_003708977.1|	-	3.6	7.5	15.5	17	5.3	10.8	1.9	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
YtxH	PF12732.2	gi|297620840|ref|YP_003708977.1|	-	9.5	6.6	8.6	8.9	6.7	1.2	2.5	1	1	1	2	2	2	0	YtxH-like	protein
DUF2764	PF10962.3	gi|297620841|ref|YP_003708978.1|	-	1e-57	195.4	5.5	1.2e-57	195.2	3.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2764)
ATP-synt_ab	PF00006.20	gi|297620842|ref|YP_003708979.1|	-	1.4e-75	253.5	0.0	2e-75	253.0	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_N	PF02874.18	gi|297620842|ref|YP_003708979.1|	-	7.2e-09	35.7	2.1	1.4e-08	34.7	0.6	2.3	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
ATP-synt_ab_C	PF00306.22	gi|297620842|ref|YP_003708979.1|	-	1.9e-05	25.0	0.1	4.4e-05	23.9	0.1	1.6	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab	PF00006.20	gi|297620843|ref|YP_003708980.1|	-	7e-46	156.4	0.1	1.1e-45	155.8	0.1	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_N	PF02874.18	gi|297620843|ref|YP_003708980.1|	-	1.6e-08	34.6	0.5	4.3e-08	33.2	0.4	1.8	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
CN_hydrolase	PF00795.17	gi|297620843|ref|YP_003708980.1|	-	0.031	13.6	0.0	0.073	12.4	0.0	1.6	1	1	0	1	1	1	0	Carbon-nitrogen	hydrolase
ATP-synt_D	PF01813.12	gi|297620844|ref|YP_003708981.1|	-	4.3e-38	130.8	6.4	5e-38	130.6	4.4	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
MscS_porin	PF12795.2	gi|297620844|ref|YP_003708981.1|	-	0.0054	16.0	1.0	0.0054	16.0	0.7	1.7	2	0	0	2	2	2	1	Mechanosensitive	ion	channel	porin	domain
Cmyb_C	PF09316.5	gi|297620844|ref|YP_003708981.1|	-	0.019	14.6	0.6	0.038	13.6	0.4	1.5	1	0	0	1	1	1	0	C-myb,	C-terminal
Spc7	PF08317.6	gi|297620844|ref|YP_003708981.1|	-	1.4	7.4	8.7	0.04	12.5	1.0	1.9	2	0	0	2	2	2	0	Spc7	kinetochore	protein
KID	PF02524.9	gi|297620844|ref|YP_003708981.1|	-	3.5	8.1	5.8	61	4.4	0.1	4.0	4	0	0	4	4	4	0	KID	repeat
V_ATPase_I	PF01496.14	gi|297620845|ref|YP_003708982.1|	-	2.8e-48	164.3	6.4	3.1e-32	111.3	0.1	2.1	2	0	0	2	2	2	2	V-type	ATPase	116kDa	subunit	family
DUF4200	PF13863.1	gi|297620845|ref|YP_003708982.1|	-	0.0021	18.0	11.5	0.003	17.4	2.6	2.5	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF4200)
DUF1640	PF07798.6	gi|297620845|ref|YP_003708982.1|	-	0.28	11.2	4.5	0.55	10.2	3.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1640)
DUF342	PF03961.8	gi|297620845|ref|YP_003708982.1|	-	2.5	6.4	9.4	1.4	7.2	2.0	2.5	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF342)
Tropomyosin_1	PF12718.2	gi|297620845|ref|YP_003708982.1|	-	7.4	6.4	10.9	0.96	9.2	0.6	2.6	3	0	0	3	3	3	0	Tropomyosin	like
ATP-synt_C	PF00137.16	gi|297620846|ref|YP_003708983.1|	-	3.4e-25	87.7	27.7	7.5e-13	48.1	10.0	2.1	2	0	0	2	2	2	2	ATP	synthase	subunit	C
Lyase_1	PF00206.15	gi|297620847|ref|YP_003708984.1|	-	7.7e-111	370.2	0.0	1.4e-110	369.3	0.0	1.4	2	0	0	2	2	2	1	Lyase
FumaraseC_C	PF10415.4	gi|297620847|ref|YP_003708984.1|	-	7.2e-20	70.8	0.1	7.2e-20	70.8	0.1	2.0	2	0	0	2	2	2	1	Fumarase	C	C-terminus
Lipase_3	PF01764.20	gi|297620849|ref|YP_003708986.1|	-	0.0052	16.4	0.0	0.019	14.5	0.0	1.9	1	0	0	1	1	1	1	Lipase	(class	3)
AAA	PF00004.24	gi|297620850|ref|YP_003708987.1|	-	7.1e-35	120.0	0.0	2.3e-34	118.4	0.0	2.0	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|297620850|ref|YP_003708987.1|	-	8e-06	26.6	0.0	6.6e-05	23.7	0.0	2.7	1	1	0	1	1	1	1	AAA	domain
AAA_2	PF07724.9	gi|297620850|ref|YP_003708987.1|	-	1.6e-05	24.9	0.0	6.9e-05	22.8	0.0	2.1	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
AAA_22	PF13401.1	gi|297620850|ref|YP_003708987.1|	-	0.00012	22.2	0.1	0.002	18.2	0.0	2.5	1	1	0	1	1	1	1	AAA	domain
RuvB_N	PF05496.7	gi|297620850|ref|YP_003708987.1|	-	0.00033	19.7	0.0	0.0011	18.0	0.0	1.9	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_5	PF07728.9	gi|297620850|ref|YP_003708987.1|	-	0.00038	20.1	0.0	0.0011	18.6	0.0	1.9	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_18	PF13238.1	gi|297620850|ref|YP_003708987.1|	-	0.00044	20.5	0.0	0.0026	18.0	0.0	2.4	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297620850|ref|YP_003708987.1|	-	0.0012	18.8	0.0	0.0059	16.6	0.0	2.1	1	1	0	2	2	2	1	AAA	ATPase	domain
AAA_33	PF13671.1	gi|297620850|ref|YP_003708987.1|	-	0.0016	18.3	0.0	0.0036	17.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_24	PF13479.1	gi|297620850|ref|YP_003708987.1|	-	0.0032	17.0	0.0	0.0076	15.8	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|297620850|ref|YP_003708987.1|	-	0.007	15.7	0.0	0.024	14.0	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
Tox-PL-2	PF15643.1	gi|297620850|ref|YP_003708987.1|	-	0.0072	16.2	0.7	0.036	14.0	0.1	2.5	2	0	0	2	2	2	1	Papain	fold	toxin	2
IstB_IS21	PF01695.12	gi|297620850|ref|YP_003708987.1|	-	0.021	14.2	0.0	0.065	12.6	0.0	1.9	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|297620850|ref|YP_003708987.1|	-	0.021	14.5	0.1	0.046	13.4	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
CDC48_2	PF02933.12	gi|297620850|ref|YP_003708987.1|	-	0.021	14.4	1.1	6.6	6.4	0.0	4.5	5	0	0	5	5	5	0	Cell	division	protein	48	(CDC48),	domain	2
RNA_helicase	PF00910.17	gi|297620850|ref|YP_003708987.1|	-	0.024	14.8	0.0	0.067	13.3	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
AAA_28	PF13521.1	gi|297620850|ref|YP_003708987.1|	-	0.024	14.5	0.0	0.06	13.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.16	gi|297620850|ref|YP_003708987.1|	-	0.026	13.7	0.0	0.05	12.7	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
EndoU_bacteria	PF14436.1	gi|297620850|ref|YP_003708987.1|	-	0.031	14.1	0.0	0.1	12.4	0.0	1.9	1	0	0	1	1	1	0	Bacterial	EndoU	nuclease
AAA_3	PF07726.6	gi|297620850|ref|YP_003708987.1|	-	0.055	13.0	0.0	0.2	11.2	0.0	2.0	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
eIF-1a	PF01176.14	gi|297620850|ref|YP_003708987.1|	-	0.077	12.4	0.3	4	6.9	0.0	3.0	3	0	0	3	3	3	0	Translation	initiation	factor	1A	/	IF-1
F-box-like	PF12937.2	gi|297620851|ref|YP_003708988.1|	-	0.00094	18.8	0.0	0.0021	17.7	0.0	1.6	1	0	0	1	1	1	1	F-box-like
F-box	PF00646.28	gi|297620851|ref|YP_003708988.1|	-	0.0019	17.7	0.1	0.006	16.2	0.0	1.9	1	0	0	1	1	1	1	F-box	domain
RNase_T	PF00929.19	gi|297620852|ref|YP_003708989.1|	-	2.1e-35	122.4	0.3	2.9e-35	121.9	0.2	1.2	1	0	0	1	1	1	1	Exonuclease
DUF3820	PF12843.2	gi|297620852|ref|YP_003708989.1|	-	1.8e-08	33.8	0.1	5.4e-08	32.3	0.0	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3820)
RNase_H_2	PF13482.1	gi|297620852|ref|YP_003708989.1|	-	4.3e-07	29.8	1.2	6.7e-06	25.9	0.9	2.2	1	1	0	1	1	1	1	RNase_H	superfamily
YbjN	PF10722.4	gi|297620853|ref|YP_003708990.1|	-	2e-08	34.2	0.0	2.3e-08	34.0	0.0	1.1	1	0	0	1	1	1	1	Putative	bacterial	sensory	transduction	regulator
CsrA	PF02599.11	gi|297620854|ref|YP_003708991.1|	-	2.9e-17	62.1	2.1	3.7e-17	61.7	1.5	1.2	1	0	0	1	1	1	1	Global	regulator	protein	family
DUF4469	PF14734.1	gi|297620854|ref|YP_003708991.1|	-	0.011	15.5	0.4	0.013	15.3	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4469)	with	IG-like	fold
FtsK_SpoIIIE_N	PF12538.3	gi|297620854|ref|YP_003708991.1|	-	0.022	14.8	0.4	0.024	14.7	0.3	1.2	1	0	0	1	1	1	0	DNA	transporter
FliO	PF04347.8	gi|297620856|ref|YP_003708993.1|	-	2.9e-08	33.6	0.1	5.7e-07	29.4	0.0	2.0	2	0	0	2	2	2	1	Flagellar	biosynthesis	protein,	FliO
MVIN	PF03023.9	gi|297620856|ref|YP_003708993.1|	-	0.0022	16.4	0.1	0.0028	16.1	0.0	1.1	1	0	0	1	1	1	1	MviN-like	protein
DUF3316	PF11777.3	gi|297620856|ref|YP_003708993.1|	-	0.024	14.4	0.0	7.5	6.3	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3316)
BatD	PF13584.1	gi|297620856|ref|YP_003708993.1|	-	0.035	12.7	0.0	0.043	12.4	0.0	1.1	1	0	0	1	1	1	0	Oxygen	tolerance
RHS_repeat	PF05593.9	gi|297620857|ref|YP_003708994.1|	-	1.5e-49	165.1	68.5	1.3e-05	25.2	0.0	20.2	16	5	4	20	20	20	14	RHS	Repeat
MORN_2	PF07661.8	gi|297620857|ref|YP_003708994.1|	-	0.0062	16.4	8.0	3.1	8.0	0.0	8.5	10	0	0	10	10	10	1	MORN	repeat	variant
Barstar	PF01337.13	gi|297620858|ref|YP_003708995.1|	-	8.7e-19	67.1	0.2	1.3e-18	66.6	0.1	1.2	1	0	0	1	1	1	1	Barstar	(barnase	inhibitor)
DUF4096	PF13340.1	gi|297620860|ref|YP_003708997.1|	-	1.1e-29	102.0	0.9	1.5e-29	101.6	0.6	1.2	1	0	0	1	1	1	1	Putative	transposase	of	IS4/5	family	(DUF4096)
HTH_Tnp_1	PF01527.15	gi|297620861|ref|YP_003708998.1|	-	3.5e-11	42.8	0.4	4.5e-11	42.5	0.3	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.1	gi|297620861|ref|YP_003708998.1|	-	1.1e-05	25.3	0.0	1.6e-05	24.7	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297620861|ref|YP_003708998.1|	-	0.00018	21.0	0.0	0.00027	20.4	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
RepB-RCR_reg	PF10723.4	gi|297620861|ref|YP_003708998.1|	-	0.012	15.3	0.1	0.14	11.9	0.0	2.0	2	0	0	2	2	2	0	Replication	regulatory	protein	RepB
HTH_29	PF13551.1	gi|297620861|ref|YP_003708998.1|	-	0.032	14.3	0.0	0.037	14.1	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
MTBP_C	PF14920.1	gi|297620861|ref|YP_003708998.1|	-	0.095	12.1	0.1	0.1	12.0	0.0	1.1	1	0	0	1	1	1	0	MDM2-binding
DivIC	PF04977.10	gi|297620861|ref|YP_003708998.1|	-	0.27	10.7	1.9	0.36	10.3	1.3	1.2	1	0	0	1	1	1	0	Septum	formation	initiator
rve	PF00665.21	gi|297620862|ref|YP_003708999.1|	-	3e-21	75.7	0.0	4.6e-21	75.1	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.1	gi|297620862|ref|YP_003708999.1|	-	4.8e-15	55.3	1.3	9.7e-15	54.3	0.9	1.5	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.1	gi|297620862|ref|YP_003708999.1|	-	1.7e-13	49.8	0.3	3.7e-13	48.7	0.2	1.6	1	0	0	1	1	1	1	Integrase	core	domain
rve_2	PF13333.1	gi|297620862|ref|YP_003708999.1|	-	0.00012	22.0	2.9	0.00024	21.0	2.0	1.6	1	0	0	1	1	1	1	Integrase	core	domain
HpaB_N	PF11794.3	gi|297620862|ref|YP_003708999.1|	-	0.035	13.5	0.4	5	6.4	0.0	2.2	2	0	0	2	2	2	0	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HTH_32	PF13565.1	gi|297620862|ref|YP_003708999.1|	-	0.064	14.0	0.3	0.064	14.0	0.2	2.8	3	1	0	3	3	3	0	Homeodomain-like	domain
rve_3	PF13683.1	gi|297620863|ref|YP_003709000.1|	-	1.1e-28	98.5	0.0	2.7e-28	97.2	0.0	1.7	1	0	0	1	1	1	1	Integrase	core	domain
rve	PF00665.21	gi|297620863|ref|YP_003709000.1|	-	4e-23	81.7	0.0	8.8e-23	80.6	0.0	1.6	2	0	0	2	2	2	1	Integrase	core	domain
HTH_21	PF13276.1	gi|297620863|ref|YP_003709000.1|	-	7.5e-14	51.4	8.7	1.7e-13	50.3	6.0	1.6	1	0	0	1	1	1	1	HTH-like	domain
DDE_Tnp_IS240	PF13610.1	gi|297620863|ref|YP_003709000.1|	-	0.00028	20.8	0.0	0.0005	20.0	0.0	1.5	1	0	0	1	1	1	1	DDE	domain
rve_2	PF13333.1	gi|297620863|ref|YP_003709000.1|	-	0.03	14.3	0.0	0.29	11.2	0.0	2.4	2	0	0	2	2	2	0	Integrase	core	domain
HTH_32	PF13565.1	gi|297620863|ref|YP_003709000.1|	-	0.11	13.3	4.2	0.15	12.8	0.4	2.7	2	1	1	3	3	3	0	Homeodomain-like	domain
HTH_Tnp_1	PF01527.15	gi|297620864|ref|YP_003709001.1|	-	1.1e-17	63.7	0.1	1.3e-17	63.4	0.1	1.1	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.1	gi|297620864|ref|YP_003709001.1|	-	2.6e-07	30.4	0.0	3.8e-07	29.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297620864|ref|YP_003709001.1|	-	3.4e-06	26.5	0.0	6e-06	25.7	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_29	PF13551.1	gi|297620864|ref|YP_003709001.1|	-	6.8e-05	22.9	0.0	8.7e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_Tnp_IS630	PF01710.11	gi|297620864|ref|YP_003709001.1|	-	0.00012	21.7	0.3	0.00013	21.5	0.2	1.1	1	0	0	1	1	1	1	Transposase
HTH_psq	PF05225.11	gi|297620864|ref|YP_003709001.1|	-	0.0014	18.1	0.0	0.0025	17.3	0.0	1.4	1	0	0	1	1	1	1	helix-turn-helix,	Psq	domain
DUF1153	PF06627.6	gi|297620864|ref|YP_003709001.1|	-	0.0016	18.2	0.1	0.0028	17.4	0.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1153)
HTH_17	PF12728.2	gi|297620864|ref|YP_003709001.1|	-	0.0019	18.3	0.1	0.0089	16.2	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
Toxin_57	PF15535.1	gi|297620865|ref|YP_003709002.1|	-	2.3e-25	88.4	2.6	2.4e-25	88.3	0.7	1.8	2	0	0	2	2	2	1	Putative	toxin	57
RHS_repeat	PF05593.9	gi|297620867|ref|YP_003709004.1|	-	4.6e-05	23.4	0.1	0.011	15.9	0.0	3.8	4	1	0	4	4	4	1	RHS	Repeat
DDE_Tnp_IS1	PF03400.8	gi|297620868|ref|YP_003709005.1|	-	2e-07	31.1	0.1	2e-07	31.1	0.1	1.1	1	0	0	1	1	1	1	IS1	transposase
rve_3	PF13683.1	gi|297620868|ref|YP_003709005.1|	-	0.0012	18.3	0.1	0.0016	17.9	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
DDE_Tnp_IS1	PF03400.8	gi|297620869|ref|YP_003709006.1|	-	9.2e-12	45.2	0.1	1.7e-11	44.3	0.1	1.6	1	1	0	1	1	1	1	IS1	transposase
Zn_Tnp_IS1	PF03811.8	gi|297620869|ref|YP_003709006.1|	-	4.1e-05	22.9	3.7	6.3e-05	22.3	2.6	1.3	1	0	0	1	1	1	1	InsA	N-terminal	domain
DDE_Tnp_IS240	PF13610.1	gi|297620869|ref|YP_003709006.1|	-	0.00047	20.1	0.0	0.0011	18.9	0.0	1.6	2	0	0	2	2	2	1	DDE	domain
DUF2387	PF09526.5	gi|297620869|ref|YP_003709006.1|	-	0.062	13.2	0.4	0.14	12.1	0.3	1.5	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
DNA_ligase_ZBD	PF03119.11	gi|297620869|ref|YP_003709006.1|	-	0.19	11.4	2.6	0.19	11.4	0.3	2.0	1	1	1	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-ISL3	PF14690.1	gi|297620869|ref|YP_003709006.1|	-	0.23	11.5	4.5	0.58	10.2	0.3	2.8	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Rad50_zn_hook	PF04423.9	gi|297620869|ref|YP_003709006.1|	-	0.53	9.7	2.7	0.56	9.7	0.2	2.5	2	1	0	2	2	2	0	Rad50	zinc	hook	motif
zf-H2C2_2	PF13465.1	gi|297620869|ref|YP_003709006.1|	-	0.95	9.8	3.6	2.6	8.5	0.1	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
Transposase_mut	PF00872.13	gi|297620871|ref|YP_003709008.1|	-	2.4e-101	339.0	0.0	2.9e-101	338.7	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.4	gi|297620871|ref|YP_003709008.1|	-	1.3e-10	41.3	0.0	4.1e-10	39.6	0.0	1.9	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.1	gi|297620871|ref|YP_003709008.1|	-	0.0074	16.2	0.6	0.11	12.5	0.1	2.7	2	1	1	3	3	3	1	DDE	domain
Hydrolase_3	PF08282.7	gi|297620873|ref|YP_003709010.1|	-	1.8e-36	126.0	0.0	2e-36	125.8	0.0	1.0	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|297620873|ref|YP_003709010.1|	-	8e-05	22.0	0.0	0.02	14.1	0.0	2.2	2	0	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase	PF00702.21	gi|297620873|ref|YP_003709010.1|	-	0.0013	19.2	0.0	2.2	8.6	0.0	2.5	2	0	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|297620873|ref|YP_003709010.1|	-	0.0047	17.1	0.4	0.15	12.2	0.3	2.4	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
FolB	PF02152.13	gi|297620874|ref|YP_003709011.1|	-	5.5e-20	71.6	0.0	6.1e-20	71.4	0.0	1.0	1	0	0	1	1	1	1	Dihydroneopterin	aldolase
adh_short	PF00106.20	gi|297620876|ref|YP_003709013.1|	-	2.4e-23	82.8	0.0	2.9e-23	82.6	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|297620876|ref|YP_003709013.1|	-	1e-19	71.2	0.0	1.5e-18	67.4	0.0	2.0	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|297620876|ref|YP_003709013.1|	-	5.6e-10	39.1	0.0	1.3e-09	37.9	0.0	1.6	2	0	0	2	2	2	1	KR	domain
Epimerase	PF01370.16	gi|297620876|ref|YP_003709013.1|	-	3.5e-06	26.6	0.0	4.5e-06	26.2	0.0	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
DFP	PF04127.10	gi|297620876|ref|YP_003709013.1|	-	0.0026	17.4	0.5	0.35	10.4	0.1	2.9	2	1	1	3	3	3	1	DNA	/	pantothenate	metabolism	flavoprotein
NAD_binding_10	PF13460.1	gi|297620876|ref|YP_003709013.1|	-	0.0073	16.3	0.0	0.014	15.4	0.0	1.4	1	1	0	1	1	1	1	NADH(P)-binding
3Beta_HSD	PF01073.14	gi|297620876|ref|YP_003709013.1|	-	0.0087	14.7	0.1	0.014	14.1	0.1	1.5	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NmrA	PF05368.8	gi|297620876|ref|YP_003709013.1|	-	0.027	13.7	0.1	0.05	12.8	0.1	1.4	1	0	0	1	1	1	0	NmrA-like	family
adh_short_C2	PF13561.1	gi|297620879|ref|YP_003709016.1|	-	7.1e-97	323.8	0.1	8.1e-97	323.7	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
Enoyl_reductase	PF12241.3	gi|297620879|ref|YP_003709016.1|	-	0.0027	16.7	0.0	0.12	11.3	0.0	2.1	1	1	1	2	2	2	2	Trans-2-enoyl-CoA	reductase	catalytic	region
ADH_zinc_N	PF00107.21	gi|297620881|ref|YP_003709018.1|	-	3.1e-25	88.2	0.0	5.4e-25	87.4	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|297620881|ref|YP_003709018.1|	-	1.2e-23	84.3	0.0	2.9e-23	83.1	0.0	1.6	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.7	gi|297620881|ref|YP_003709018.1|	-	4.2e-14	52.2	0.2	1e-11	44.5	0.0	2.7	2	1	1	3	3	3	2	Alcohol	dehydrogenase	GroES-like	domain
Ribonuc_L-PSP	PF01042.16	gi|297620882|ref|YP_003709019.1|	-	3.8e-36	123.5	0.0	4.2e-36	123.3	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
Metallophos	PF00149.23	gi|297620883|ref|YP_003709020.1|	-	2.5e-07	30.3	0.0	5.3e-07	29.2	0.0	1.6	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
PRK	PF00485.13	gi|297620884|ref|YP_003709021.1|	-	9.5e-41	139.4	0.0	1.2e-40	139.1	0.0	1.0	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_18	PF13238.1	gi|297620884|ref|YP_003709021.1|	-	2e-10	41.0	0.0	2.8e-10	40.5	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|297620884|ref|YP_003709021.1|	-	1.6e-07	32.2	0.1	2.9e-07	31.3	0.1	1.4	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|297620884|ref|YP_003709021.1|	-	0.00016	20.8	0.0	0.00026	20.1	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
CoaE	PF01121.15	gi|297620884|ref|YP_003709021.1|	-	0.00026	20.4	0.5	0.035	13.4	0.0	2.1	2	0	0	2	2	2	1	Dephospho-CoA	kinase
AAA_33	PF13671.1	gi|297620884|ref|YP_003709021.1|	-	0.0006	19.7	0.0	0.00078	19.3	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|297620884|ref|YP_003709021.1|	-	0.0027	16.6	0.5	0.019	13.8	0.1	2.0	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
SRP54	PF00448.17	gi|297620884|ref|YP_003709021.1|	-	0.012	15.0	0.3	0.04	13.3	0.2	1.8	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_28	PF13521.1	gi|297620884|ref|YP_003709021.1|	-	0.039	13.8	0.0	0.055	13.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|297620884|ref|YP_003709021.1|	-	0.048	14.1	0.1	0.11	13.0	0.0	1.6	2	0	0	2	2	1	0	Miro-like	protein
ABC_tran	PF00005.22	gi|297620884|ref|YP_003709021.1|	-	0.049	13.9	0.0	0.068	13.4	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter
AAA_19	PF13245.1	gi|297620884|ref|YP_003709021.1|	-	0.057	13.1	0.2	0.13	11.9	0.1	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
NB-ARC	PF00931.17	gi|297620884|ref|YP_003709021.1|	-	0.071	11.9	0.3	0.14	10.9	0.2	1.4	1	0	0	1	1	1	0	NB-ARC	domain
FtsK_SpoIIIE	PF01580.13	gi|297620884|ref|YP_003709021.1|	-	0.071	12.5	0.2	3	7.2	0.1	2.1	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
MobB	PF03205.9	gi|297620884|ref|YP_003709021.1|	-	0.092	12.4	0.3	0.34	10.5	0.1	2.1	3	0	0	3	3	3	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|297620884|ref|YP_003709021.1|	-	0.13	11.8	0.1	0.21	11.2	0.1	1.3	1	0	0	1	1	1	0	NACHT	domain
CbiA	PF01656.18	gi|297620884|ref|YP_003709021.1|	-	0.13	11.6	0.6	0.18	11.1	0.4	1.5	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_25	PF13481.1	gi|297620884|ref|YP_003709021.1|	-	0.14	11.5	1.0	0.24	10.7	0.3	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.1	gi|297620884|ref|YP_003709021.1|	-	0.65	10.2	2.5	0.85	9.9	1.7	1.5	1	1	0	1	1	1	0	AAA	domain
TisB_toxin	PF13939.1	gi|297620884|ref|YP_003709021.1|	-	0.98	9.2	4.7	2.5	7.9	3.3	1.7	1	0	0	1	1	1	0	Toxin	TisB,	type	I	toxin-antitoxin	system
Yip1	PF04893.12	gi|297620885|ref|YP_003709022.1|	-	0.12	11.8	10.4	0.15	11.5	7.2	1.1	1	0	0	1	1	1	0	Yip1	domain
5TM-5TMR_LYT	PF07694.7	gi|297620885|ref|YP_003709022.1|	-	0.22	10.8	5.1	0.26	10.6	3.5	1.1	1	0	0	1	1	1	0	5TMR	of	5TMR-LYT
DUF2953	PF11167.3	gi|297620885|ref|YP_003709022.1|	-	0.79	9.6	4.6	1.3	9.0	0.1	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2953)
SIMPL	PF04402.9	gi|297620886|ref|YP_003709023.1|	-	2.2e-47	161.6	2.6	2.5e-47	161.4	1.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF541)
DeoC	PF01791.4	gi|297620887|ref|YP_003709024.1|	-	4.8e-56	189.6	0.0	5.8e-56	189.4	0.0	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
Apq12	PF12716.2	gi|297620888|ref|YP_003709025.1|	-	0.036	13.7	0.7	0.065	12.9	0.5	1.4	1	0	0	1	1	1	0	Nuclear	pore	assembly	and	biogenesis
Virul_fac_BrkB	PF03631.10	gi|297620888|ref|YP_003709025.1|	-	0.27	10.5	2.7	0.27	10.5	1.8	1.2	1	1	0	1	1	1	0	Virulence	factor	BrkB
DUF3317	PF11779.3	gi|297620888|ref|YP_003709025.1|	-	0.32	10.4	1.9	0.51	9.8	1.3	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3317)
Epimerase	PF01370.16	gi|297620889|ref|YP_003709026.1|	-	3.7e-10	39.6	0.0	5e-10	39.2	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_10	PF13460.1	gi|297620889|ref|YP_003709026.1|	-	5.4e-06	26.5	0.0	7e-06	26.1	0.0	1.1	1	0	0	1	1	1	1	NADH(P)-binding
UDPG_MGDP_dh_N	PF03721.9	gi|297620889|ref|YP_003709026.1|	-	0.00038	19.8	0.0	0.0028	17.0	0.0	1.9	1	1	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|297620889|ref|YP_003709026.1|	-	0.00056	20.2	0.0	0.0011	19.3	0.0	1.4	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
3Beta_HSD	PF01073.14	gi|297620889|ref|YP_003709026.1|	-	0.0064	15.2	0.0	0.05	12.2	0.0	2.1	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
TrkA_N	PF02254.13	gi|297620889|ref|YP_003709026.1|	-	0.0093	15.9	0.0	0.015	15.2	0.0	1.4	1	0	0	1	1	1	1	TrkA-N	domain
Saccharop_dh	PF03435.13	gi|297620889|ref|YP_003709026.1|	-	0.061	12.2	0.0	0.083	11.8	0.0	1.1	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
Adenine_glyco	PF03352.8	gi|297620890|ref|YP_003709027.1|	-	4.1e-82	274.0	0.1	4.7e-82	273.8	0.1	1.0	1	0	0	1	1	1	1	Methyladenine	glycosylase
DUF3932	PF13068.1	gi|297620890|ref|YP_003709027.1|	-	0.017	15.1	0.1	0.036	14.1	0.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3932)
GSH-S_ATP	PF02955.11	gi|297620890|ref|YP_003709027.1|	-	0.14	11.2	0.0	0.25	10.4	0.0	1.4	1	0	0	1	1	1	0	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
DNA_binding_1	PF01035.15	gi|297620891|ref|YP_003709028.1|	-	5.8e-31	106.0	0.1	8.6e-31	105.5	0.0	1.3	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
Methyltransf_1N	PF02870.10	gi|297620891|ref|YP_003709028.1|	-	0.00065	20.2	0.0	0.00098	19.6	0.0	1.3	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	ribonuclease-like	domain
DUF2361	PF10153.4	gi|297620891|ref|YP_003709028.1|	-	0.035	14.3	0.4	0.064	13.4	0.3	1.3	1	0	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2361)
Catalase	PF00199.14	gi|297620892|ref|YP_003709029.1|	-	3.4e-176	585.5	0.2	4.3e-176	585.2	0.2	1.1	1	0	0	1	1	1	1	Catalase
Catalase-rel	PF06628.7	gi|297620892|ref|YP_003709029.1|	-	5.6e-20	70.9	0.1	1.1e-19	70.0	0.1	1.5	1	0	0	1	1	1	1	Catalase-related	immune-responsive
Transposase_mut	PF00872.13	gi|297620893|ref|YP_003709030.1|	-	3.6e-99	331.8	0.0	4.4e-99	331.5	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.4	gi|297620893|ref|YP_003709030.1|	-	6.9e-10	38.9	0.0	2.5e-09	37.1	0.0	2.0	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.1	gi|297620893|ref|YP_003709030.1|	-	0.033	14.1	0.3	0.11	12.4	0.0	2.1	2	1	0	2	2	2	0	DDE	domain
Peptidase_M15_4	PF13539.1	gi|297620894|ref|YP_003709031.1|	-	1.4e-19	70.3	0.0	3.2e-19	69.1	0.0	1.6	1	0	0	1	1	1	1	D-alanyl-D-alanine	carboxypeptidase
rve	PF00665.21	gi|297620895|ref|YP_003709032.1|	-	3e-21	75.7	0.0	4.6e-21	75.1	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.1	gi|297620895|ref|YP_003709032.1|	-	4.8e-15	55.3	1.3	9.7e-15	54.3	0.9	1.5	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.1	gi|297620895|ref|YP_003709032.1|	-	1.7e-13	49.8	0.3	3.7e-13	48.7	0.2	1.6	1	0	0	1	1	1	1	Integrase	core	domain
rve_2	PF13333.1	gi|297620895|ref|YP_003709032.1|	-	0.00012	22.0	2.9	0.00024	21.0	2.0	1.6	1	0	0	1	1	1	1	Integrase	core	domain
HpaB_N	PF11794.3	gi|297620895|ref|YP_003709032.1|	-	0.035	13.5	0.4	5	6.4	0.0	2.2	2	0	0	2	2	2	0	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HTH_32	PF13565.1	gi|297620895|ref|YP_003709032.1|	-	0.064	14.0	0.3	0.064	14.0	0.2	2.8	3	1	0	3	3	3	0	Homeodomain-like	domain
HTH_Tnp_1	PF01527.15	gi|297620896|ref|YP_003709033.1|	-	7.4e-12	45.0	0.4	9.5e-12	44.7	0.3	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.1	gi|297620896|ref|YP_003709033.1|	-	1.7e-05	24.7	0.0	2.5e-05	24.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297620896|ref|YP_003709033.1|	-	0.00018	21.0	0.0	0.00027	20.4	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
RepB-RCR_reg	PF10723.4	gi|297620896|ref|YP_003709033.1|	-	0.0051	16.5	0.2	0.059	13.0	0.0	2.0	2	0	0	2	2	2	1	Replication	regulatory	protein	RepB
HTH_29	PF13551.1	gi|297620896|ref|YP_003709033.1|	-	0.023	14.8	0.0	0.026	14.6	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
MTBP_C	PF14920.1	gi|297620896|ref|YP_003709033.1|	-	0.093	12.2	0.1	0.097	12.1	0.0	1.1	1	0	0	1	1	1	0	MDM2-binding
DivIC	PF04977.10	gi|297620896|ref|YP_003709033.1|	-	0.27	10.7	1.9	0.36	10.3	1.3	1.2	1	0	0	1	1	1	0	Septum	formation	initiator
DDE_Tnp_1_3	PF13612.1	gi|297620897|ref|YP_003709034.1|	-	3.3e-15	56.1	0.0	4.1e-15	55.8	0.0	1.1	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1	PF01609.16	gi|297620897|ref|YP_003709034.1|	-	1.1e-08	34.9	0.0	1.6e-08	34.3	0.0	1.3	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_4	PF13359.1	gi|297620897|ref|YP_003709034.1|	-	0.00013	21.6	0.0	0.00017	21.2	0.0	1.2	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
DDE_Tnp_IS1	PF03400.8	gi|297620898|ref|YP_003709035.1|	-	1.9e-11	44.1	0.1	3.4e-11	43.3	0.1	1.5	1	1	0	1	1	1	1	IS1	transposase
Zn_Tnp_IS1	PF03811.8	gi|297620898|ref|YP_003709035.1|	-	4.1e-05	22.9	3.7	6.3e-05	22.3	2.6	1.3	1	0	0	1	1	1	1	InsA	N-terminal	domain
DDE_Tnp_IS240	PF13610.1	gi|297620898|ref|YP_003709035.1|	-	0.0017	18.3	0.0	0.0036	17.2	0.0	1.6	2	0	0	2	2	2	1	DDE	domain
DUF2387	PF09526.5	gi|297620898|ref|YP_003709035.1|	-	0.28	11.1	1.9	0.61	10.0	1.3	1.5	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
zf-ISL3	PF14690.1	gi|297620898|ref|YP_003709035.1|	-	0.32	11.0	4.6	0.58	10.2	0.3	2.7	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Rad50_zn_hook	PF04423.9	gi|297620898|ref|YP_003709035.1|	-	0.68	9.4	2.7	0.63	9.5	0.1	2.3	2	1	0	2	2	2	0	Rad50	zinc	hook	motif
Zn-ribbon_8	PF09723.5	gi|297620898|ref|YP_003709035.1|	-	0.91	9.5	3.4	4.8	7.2	0.3	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-H2C2_2	PF13465.1	gi|297620898|ref|YP_003709035.1|	-	0.93	9.9	3.6	2.6	8.5	0.1	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
DNA_ligase_ZBD	PF03119.11	gi|297620898|ref|YP_003709035.1|	-	1.5	8.6	6.2	0.19	11.4	0.3	2.4	2	1	1	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DDE_Tnp_IS1	PF03400.8	gi|297620899|ref|YP_003709036.1|	-	2e-07	31.1	0.1	2e-07	31.1	0.1	1.1	1	0	0	1	1	1	1	IS1	transposase
rve_3	PF13683.1	gi|297620899|ref|YP_003709036.1|	-	0.0011	18.3	0.1	0.0016	17.9	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
Flu_PB1	PF00602.12	gi|297620900|ref|YP_003709037.1|	-	0.066	10.9	0.0	0.091	10.4	0.0	1.1	1	0	0	1	1	1	0	Influenza	RNA-dependent	RNA	polymerase	subunit	PB1
DDE_3	PF13358.1	gi|297620901|ref|YP_003709038.1|	-	7.9e-29	100.2	0.0	1.3e-28	99.6	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.1	gi|297620901|ref|YP_003709038.1|	-	7.4e-19	67.0	0.1	1.9e-18	65.7	0.1	1.7	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_29	PF13551.1	gi|297620901|ref|YP_003709038.1|	-	9.3e-10	38.6	0.0	2.4e-09	37.3	0.0	1.7	2	0	0	2	2	1	1	Winged	helix-turn	helix
rve	PF00665.21	gi|297620901|ref|YP_003709038.1|	-	3.7e-09	36.7	0.0	5.6e-08	32.9	0.0	2.3	2	0	0	2	2	2	1	Integrase	core	domain
HTH_23	PF13384.1	gi|297620901|ref|YP_003709038.1|	-	7.2e-07	28.6	0.0	2e-06	27.2	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|297620901|ref|YP_003709038.1|	-	2.2e-05	24.3	0.1	8.5e-05	22.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|297620901|ref|YP_003709038.1|	-	0.0003	20.1	0.0	0.00064	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
DDE_Tnp_ISAZ013	PF07592.6	gi|297620901|ref|YP_003709038.1|	-	0.0023	16.7	0.2	0.11	11.2	0.1	2.2	2	0	0	2	2	2	1	Rhodopirellula	transposase	DDE	domain
Terminase_5	PF06056.7	gi|297620901|ref|YP_003709038.1|	-	0.0027	17.2	0.0	0.0054	16.2	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
rve_3	PF13683.1	gi|297620901|ref|YP_003709038.1|	-	0.0041	16.6	0.0	0.014	14.9	0.0	1.9	2	0	0	2	2	1	1	Integrase	core	domain
Sigma70_r4	PF04545.11	gi|297620901|ref|YP_003709038.1|	-	0.012	14.9	0.0	0.034	13.4	0.0	1.8	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_40	PF14493.1	gi|297620901|ref|YP_003709038.1|	-	0.015	15.5	0.0	0.039	14.1	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_32	PF13565.1	gi|297620901|ref|YP_003709038.1|	-	0.032	15.0	1.9	5	7.9	0.0	3.5	2	1	2	4	4	3	0	Homeodomain-like	domain
HTH_38	PF13936.1	gi|297620901|ref|YP_003709038.1|	-	0.048	13.2	0.2	0.88	9.1	0.1	2.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|297620901|ref|YP_003709038.1|	-	0.065	12.8	0.0	0.16	11.6	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
GerE	PF00196.14	gi|297620901|ref|YP_003709038.1|	-	0.081	12.2	0.1	0.3	10.4	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.1	gi|297620901|ref|YP_003709038.1|	-	1.8	8.9	6.1	6	7.2	0.2	3.3	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
HTH_3	PF01381.17	gi|297620902|ref|YP_003709039.1|	-	8.2e-13	47.9	0.0	1.2e-12	47.5	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.1	gi|297620902|ref|YP_003709039.1|	-	1.6e-10	41.0	0.0	1.9e-10	40.7	0.0	1.0	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|297620902|ref|YP_003709039.1|	-	1.2e-05	25.2	0.0	1.4e-05	25.0	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_26	PF13443.1	gi|297620902|ref|YP_003709039.1|	-	0.00061	19.9	0.0	0.00085	19.4	0.0	1.2	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
RAMPs	PF03787.10	gi|297620903|ref|YP_003709040.1|	-	0.0025	17.6	0.1	0.29	10.9	0.0	2.2	1	1	0	1	1	1	1	RAMP	superfamily
DUF2276	PF10040.4	gi|297620903|ref|YP_003709040.1|	-	0.063	13.4	0.0	0.09	12.9	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2276)
HNH	PF01844.18	gi|297620904|ref|YP_003709041.1|	-	3e-10	39.7	2.7	4.1e-10	39.3	1.9	1.2	1	0	0	1	1	1	1	HNH	endonuclease
zf-C4pol	PF14260.1	gi|297620904|ref|YP_003709041.1|	-	0.023	14.6	0.5	0.033	14.1	0.3	1.3	1	0	0	1	1	1	0	C4-type	zinc-finger	of	DNA	polymerase	delta
zf-P11	PF03854.9	gi|297620904|ref|YP_003709041.1|	-	0.13	11.7	1.7	4.8	6.7	0.0	2.2	2	0	0	2	2	2	0	P-11	zinc	finger
E6	PF00518.12	gi|297620904|ref|YP_003709041.1|	-	0.2	12.0	2.0	0.26	11.6	1.4	1.2	1	0	0	1	1	1	0	Early	Protein	(E6)
NapB	PF03892.9	gi|297620904|ref|YP_003709041.1|	-	0.21	11.2	2.0	0.98	9.0	1.3	1.7	1	1	1	2	2	2	0	Nitrate	reductase	cytochrome	c-type	subunit	(NapB)
DUF3886	PF13025.1	gi|297620905|ref|YP_003709042.1|	-	5.4	7.0	9.8	2.8	7.9	0.6	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3886)
DnaB_C	PF03796.10	gi|297620906|ref|YP_003709043.1|	-	2.4e-45	154.4	0.0	3.2e-45	154.0	0.0	1.1	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_25	PF13481.1	gi|297620906|ref|YP_003709043.1|	-	5.4e-09	35.7	0.0	7.3e-09	35.3	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
Peptidase_A8	PF01252.13	gi|297620907|ref|YP_003709044.1|	-	0.32	10.6	5.9	0.42	10.1	3.9	1.6	1	1	0	1	1	1	0	Signal	peptidase	(SPase)	II
Terminase_6	PF03237.10	gi|297620908|ref|YP_003709045.1|	-	2.3e-08	33.1	0.2	1.7e-07	30.3	0.1	2.0	1	1	0	1	1	1	1	Terminase-like	family
AAA_25	PF13481.1	gi|297620910|ref|YP_003709047.1|	-	3.8e-30	104.7	0.0	2.1e-29	102.3	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
Toprim_4	PF13662.1	gi|297620910|ref|YP_003709047.1|	-	1.3e-13	50.6	0.1	5.8e-13	48.6	0.1	2.0	2	0	0	2	2	2	1	Toprim	domain
Toprim_3	PF13362.1	gi|297620910|ref|YP_003709047.1|	-	4.4e-11	42.8	0.0	9.5e-11	41.7	0.0	1.6	1	0	0	1	1	1	1	Toprim	domain
HTH_24	PF13412.1	gi|297620910|ref|YP_003709047.1|	-	1.5e-08	33.8	0.0	3e-08	32.9	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|297620910|ref|YP_003709047.1|	-	0.00046	19.8	0.0	0.00089	18.8	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_26	PF13443.1	gi|297620910|ref|YP_003709047.1|	-	0.013	15.6	0.1	0.054	13.7	0.0	2.1	2	0	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
MarR	PF01047.17	gi|297620910|ref|YP_003709047.1|	-	0.02	14.6	0.0	0.043	13.5	0.0	1.6	1	0	0	1	1	1	0	MarR	family
HTH_28	PF13518.1	gi|297620910|ref|YP_003709047.1|	-	0.02	14.8	0.0	0.087	12.8	0.0	2.1	2	0	0	2	2	1	0	Helix-turn-helix	domain
DUF3654	PF12376.3	gi|297620910|ref|YP_003709047.1|	-	0.049	13.4	3.9	0.46	10.2	1.7	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3654)
TrmB	PF01978.14	gi|297620910|ref|YP_003709047.1|	-	0.082	12.6	0.2	0.22	11.2	0.1	1.8	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_36	PF13730.1	gi|297620910|ref|YP_003709047.1|	-	0.089	12.9	0.0	0.21	11.7	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
AAA	PF00004.24	gi|297620910|ref|YP_003709047.1|	-	0.098	12.8	0.0	2.9	8.1	0.0	3.0	1	1	1	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
HTH_27	PF13463.1	gi|297620910|ref|YP_003709047.1|	-	0.12	12.7	0.0	0.31	11.3	0.0	1.8	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Phage_integrase	PF00589.17	gi|297620911|ref|YP_003709048.1|	-	3e-09	36.7	0.6	5.1e-09	36.0	0.4	1.4	1	0	0	1	1	1	1	Phage	integrase	family
FAM92	PF06730.6	gi|297620911|ref|YP_003709048.1|	-	0.0061	15.9	0.6	0.011	15.0	0.4	1.4	1	0	0	1	1	1	1	FAM92	protein
BEN	PF10523.4	gi|297620911|ref|YP_003709048.1|	-	0.015	15.3	0.4	5.8	7.0	0.0	2.8	3	0	0	3	3	3	0	BEN	domain
Resolvase	PF00239.16	gi|297620911|ref|YP_003709048.1|	-	0.062	13.1	0.4	0.33	10.8	0.1	2.2	2	1	1	3	3	3	0	Resolvase,	N	terminal	domain
Phage_integrase	PF00589.17	gi|297620912|ref|YP_003709049.1|	-	1.3e-33	116.1	0.3	2.3e-33	115.3	0.1	1.4	2	0	0	2	2	2	1	Phage	integrase	family
DUF3435	PF11917.3	gi|297620912|ref|YP_003709049.1|	-	0.01	14.5	0.1	0.025	13.2	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3435)
DDHD	PF02862.12	gi|297620912|ref|YP_003709049.1|	-	0.088	12.5	0.0	0.15	11.8	0.0	1.4	1	0	0	1	1	1	0	DDHD	domain
WD-3	PF09765.4	gi|297620913|ref|YP_003709050.1|	-	0.031	13.5	2.5	0.22	10.7	0.0	2.7	3	0	0	3	3	3	0	WD-repeat	region
Peptidase_M32	PF02074.10	gi|297620914|ref|YP_003709051.1|	-	1.7e-153	511.8	0.2	2.1e-153	511.5	0.2	1.0	1	0	0	1	1	1	1	Carboxypeptidase	Taq	(M32)	metallopeptidase
Neuromodulin_N	PF10580.4	gi|297620914|ref|YP_003709051.1|	-	0.027	14.1	0.1	0.092	12.4	0.1	1.9	1	0	0	1	1	1	0	Gap	junction	protein	N-terminal	region
Ala_racemase_N	PF01168.15	gi|297620915|ref|YP_003709052.1|	-	5.3e-57	192.8	0.0	9.1e-57	192.1	0.0	1.4	1	0	0	1	1	1	1	Alanine	racemase,	N-terminal	domain
Ala_racemase_C	PF00842.16	gi|297620915|ref|YP_003709052.1|	-	1.1e-38	131.5	0.0	2.1e-38	130.6	0.0	1.5	1	0	0	1	1	1	1	Alanine	racemase,	C-terminal	domain
Mur_ligase_M	PF08245.7	gi|297620915|ref|YP_003709052.1|	-	7.1e-13	49.0	0.0	1.3e-12	48.1	0.0	1.4	1	0	0	1	1	1	1	Mur	ligase	middle	domain
Mur_ligase	PF01225.20	gi|297620915|ref|YP_003709052.1|	-	0.00013	21.9	0.0	0.00043	20.2	0.0	2.0	2	0	0	2	2	2	1	Mur	ligase	family,	catalytic	domain
Sulf_transp	PF04143.9	gi|297620915|ref|YP_003709052.1|	-	0.17	11.9	1.1	0.35	10.9	0.7	1.5	1	0	0	1	1	1	0	Sulphur	transport
Hormone_recep	PF00104.25	gi|297620916|ref|YP_003709053.1|	-	0.0057	15.7	0.7	0.01	14.9	0.2	1.6	2	0	0	2	2	2	1	Ligand-binding	domain	of	nuclear	hormone	receptor
DUF768	PF05589.6	gi|297620916|ref|YP_003709053.1|	-	0.014	15.3	0.1	0.031	14.1	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF768)
YjgP_YjgQ	PF03739.9	gi|297620917|ref|YP_003709054.1|	-	4.7e-45	153.8	8.1	2.4e-43	148.2	5.6	2.0	1	1	0	1	1	1	1	Predicted	permease	YjgP/YjgQ	family
DUF4199	PF13858.1	gi|297620917|ref|YP_003709054.1|	-	0.12	12.3	0.0	0.12	12.3	0.0	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF4199)
YjgP_YjgQ	PF03739.9	gi|297620918|ref|YP_003709055.1|	-	1.1e-46	159.2	10.0	1.3e-46	159.0	7.0	1.0	1	0	0	1	1	1	1	Predicted	permease	YjgP/YjgQ	family
DUF4339	PF14237.1	gi|297620919|ref|YP_003709056.1|	-	3e-14	52.3	0.6	6e-14	51.3	0.1	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4339)
ATP_bind_3	PF01171.15	gi|297620920|ref|YP_003709057.1|	-	9.5e-50	168.6	0.0	1.4e-49	168.0	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
Asn_synthase	PF00733.16	gi|297620920|ref|YP_003709057.1|	-	1.3e-05	24.8	0.0	2.2e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	Asparagine	synthase
PAPS_reduct	PF01507.14	gi|297620920|ref|YP_003709057.1|	-	0.12	12.2	0.0	0.17	11.7	0.0	1.3	1	0	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
Peptidase_M41	PF01434.13	gi|297620921|ref|YP_003709058.1|	-	7.7e-76	254.2	0.7	1.3e-75	253.4	0.5	1.4	1	0	0	1	1	1	1	Peptidase	family	M41
AAA	PF00004.24	gi|297620921|ref|YP_003709058.1|	-	9.9e-45	151.9	1.1	4e-44	150.0	0.0	2.6	3	0	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|297620921|ref|YP_003709058.1|	-	0.00019	21.5	2.2	0.017	15.2	0.0	3.4	3	1	0	3	3	3	1	AAA	domain
Zeta_toxin	PF06414.7	gi|297620921|ref|YP_003709058.1|	-	0.00036	19.6	1.0	0.28	10.2	0.0	2.9	3	0	0	3	3	3	2	Zeta	toxin
AAA_16	PF13191.1	gi|297620921|ref|YP_003709058.1|	-	0.00044	20.2	0.1	0.0044	17.0	0.0	2.5	2	1	1	3	3	3	1	AAA	ATPase	domain
AAA_5	PF07728.9	gi|297620921|ref|YP_003709058.1|	-	0.00054	19.7	0.0	0.0033	17.1	0.0	2.3	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_19	PF13245.1	gi|297620921|ref|YP_003709058.1|	-	0.0039	16.9	0.7	0.015	15.0	0.5	2.0	1	0	0	1	1	1	1	Part	of	AAA	domain
TIP49	PF06068.8	gi|297620921|ref|YP_003709058.1|	-	0.004	15.9	0.0	0.0077	14.9	0.0	1.4	1	0	0	1	1	1	1	TIP49	C-terminus
AAA_17	PF13207.1	gi|297620921|ref|YP_003709058.1|	-	0.01	16.6	0.0	0.01	16.6	0.0	3.2	3	1	0	3	3	3	0	AAA	domain
IstB_IS21	PF01695.12	gi|297620921|ref|YP_003709058.1|	-	0.011	15.1	0.0	0.023	14.0	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_14	PF13173.1	gi|297620921|ref|YP_003709058.1|	-	0.013	15.4	0.0	0.063	13.1	0.0	2.2	1	0	0	1	1	1	0	AAA	domain
RuvB_N	PF05496.7	gi|297620921|ref|YP_003709058.1|	-	0.018	14.0	0.0	0.1	11.6	0.0	2.1	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
Mg_chelatase	PF01078.16	gi|297620921|ref|YP_003709058.1|	-	0.024	13.8	0.5	0.056	12.5	0.3	1.6	1	1	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_2	PF07724.9	gi|297620921|ref|YP_003709058.1|	-	0.031	14.1	0.3	0.13	12.2	0.0	2.2	3	0	0	3	3	1	0	AAA	domain	(Cdc48	subfamily)
Exonuc_VII_S	PF02609.11	gi|297620921|ref|YP_003709058.1|	-	0.037	13.8	2.3	3.5	7.4	0.1	2.9	2	0	0	2	2	2	0	Exonuclease	VII	small	subunit
PhoH	PF02562.11	gi|297620921|ref|YP_003709058.1|	-	0.059	12.5	0.2	0.27	10.4	0.1	2.1	2	0	0	2	2	2	0	PhoH-like	protein
AAA_33	PF13671.1	gi|297620921|ref|YP_003709058.1|	-	0.085	12.7	0.0	0.22	11.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|297620921|ref|YP_003709058.1|	-	0.2	11.0	2.6	0.17	11.2	0.1	2.2	2	1	1	3	3	3	0	AAA	domain
AAA_18	PF13238.1	gi|297620921|ref|YP_003709058.1|	-	0.49	10.6	3.5	2.7	8.3	0.0	3.3	3	0	0	3	3	3	0	AAA	domain
RNase_PH	PF01138.16	gi|297620923|ref|YP_003709060.1|	-	7.8e-40	136.2	0.0	2.5e-20	73.1	0.0	2.4	2	0	0	2	2	2	2	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|297620923|ref|YP_003709060.1|	-	3.2e-26	91.0	3.4	1.1e-15	57.2	0.2	2.8	2	0	0	2	2	2	2	3'	exoribonuclease	family,	domain	2
S1	PF00575.18	gi|297620923|ref|YP_003709060.1|	-	1.5e-18	66.6	3.3	6.1e-18	64.6	1.5	2.3	2	0	0	2	2	2	1	S1	RNA	binding	domain
PNPase	PF03726.9	gi|297620923|ref|YP_003709060.1|	-	1.4e-17	63.6	2.9	3.6e-17	62.3	2.0	1.7	1	0	0	1	1	1	1	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
KH_1	PF00013.24	gi|297620923|ref|YP_003709060.1|	-	1.2e-13	50.4	3.9	3.5e-13	48.9	2.7	1.9	1	0	0	1	1	1	1	KH	domain
KH_3	PF13014.1	gi|297620923|ref|YP_003709060.1|	-	3.6e-08	32.8	2.3	1.1e-07	31.3	1.6	1.9	1	0	0	1	1	1	1	KH	domain
KH_2	PF07650.12	gi|297620923|ref|YP_003709060.1|	-	0.00073	19.0	0.4	0.0024	17.3	0.2	1.9	1	0	0	1	1	1	1	KH	domain
KH_5	PF13184.1	gi|297620923|ref|YP_003709060.1|	-	0.01	15.6	0.3	0.039	13.7	0.2	1.9	1	0	0	1	1	1	0	NusA-like	KH	domain
Ribosomal_S15	PF00312.17	gi|297620924|ref|YP_003709061.1|	-	3.7e-27	93.9	1.9	4.1e-27	93.7	1.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S15
LMP	PF04778.7	gi|297620924|ref|YP_003709061.1|	-	0.022	14.5	0.1	0.025	14.3	0.1	1.0	1	0	0	1	1	1	0	LMP	repeated	region
Sporozoite_P67	PF05642.6	gi|297620924|ref|YP_003709061.1|	-	0.14	9.9	0.1	0.14	9.9	0.1	1.0	1	0	0	1	1	1	0	Sporozoite	P67	surface	antigen
Cytochrom_C1	PF02167.10	gi|297620925|ref|YP_003709062.1|	-	0.0082	15.8	0.0	0.0082	15.8	0.0	1.1	1	0	0	1	1	1	1	Cytochrome	C1	family
dCMP_cyt_deam_1	PF00383.17	gi|297620926|ref|YP_003709063.1|	-	4.2e-24	84.1	0.5	5.6e-24	83.7	0.3	1.2	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
APOBEC_N	PF08210.6	gi|297620926|ref|YP_003709063.1|	-	0.00027	20.6	0.0	0.00068	19.3	0.0	1.7	1	1	0	1	1	1	1	APOBEC-like	N-terminal	domain
Bd3614-deam	PF14439.1	gi|297620926|ref|YP_003709063.1|	-	0.024	14.4	3.7	0.054	13.3	1.1	2.0	1	1	1	2	2	2	0	Bd3614-like	deaminase
FUSC-like	PF12805.2	gi|297620928|ref|YP_003709065.1|	-	0.0056	15.6	0.3	0.011	14.7	0.2	1.6	1	1	1	2	2	2	1	FUSC-like	inner	membrane	protein	yccS
DUF4064	PF13273.1	gi|297620928|ref|YP_003709065.1|	-	0.043	13.9	0.2	0.17	11.9	0.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4064)
DUF1673	PF07895.6	gi|297620928|ref|YP_003709065.1|	-	0.42	10.1	5.7	0.39	10.2	2.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1673)
Rhomboid	PF01694.17	gi|297620929|ref|YP_003709066.1|	-	3.4e-11	43.3	21.7	6.8e-11	42.3	13.7	2.1	2	1	0	2	2	2	1	Rhomboid	family
DER1	PF04511.10	gi|297620929|ref|YP_003709066.1|	-	0.0062	16.0	13.8	0.011	15.2	9.6	1.4	1	0	0	1	1	1	1	Der1-like	family
MNHE	PF01899.11	gi|297620929|ref|YP_003709066.1|	-	0.012	15.3	5.5	1.4	8.4	0.6	2.7	1	1	1	2	2	2	0	Na+/H+	ion	antiporter	subunit
Ribosomal_L31	PF01197.13	gi|297620930|ref|YP_003709067.1|	-	7.9e-27	93.0	0.4	1e-26	92.6	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L31
RF-1	PF00472.15	gi|297620931|ref|YP_003709068.1|	-	3.7e-43	145.9	1.2	7.4e-43	144.9	0.8	1.5	1	0	0	1	1	1	1	RF-1	domain
PCRF	PF03462.13	gi|297620931|ref|YP_003709068.1|	-	2.9e-34	117.2	0.1	8.5e-34	115.7	0.1	1.8	1	0	0	1	1	1	1	PCRF	domain
DUF3160	PF11369.3	gi|297620931|ref|YP_003709068.1|	-	0.0081	14.5	0.7	0.015	13.6	0.5	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3160)
Ax_dynein_light	PF10211.4	gi|297620931|ref|YP_003709068.1|	-	0.041	13.7	0.8	0.041	13.7	0.5	2.1	2	0	0	2	2	2	0	Axonemal	dynein	light	chain
Allexi_40kDa	PF05549.6	gi|297620931|ref|YP_003709068.1|	-	0.14	11.4	3.1	0.069	12.4	0.7	1.5	2	0	0	2	2	2	0	Allexivirus	40kDa	protein
DUF1664	PF07889.7	gi|297620931|ref|YP_003709068.1|	-	0.47	10.2	4.2	0.17	11.6	0.8	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
MTS	PF05175.9	gi|297620932|ref|YP_003709069.1|	-	2.4e-19	69.3	0.0	3.7e-19	68.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|297620932|ref|YP_003709069.1|	-	1.7e-14	53.8	0.0	2.6e-14	53.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297620932|ref|YP_003709069.1|	-	2.7e-12	47.2	0.0	7.2e-12	45.8	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297620932|ref|YP_003709069.1|	-	3.9e-10	39.5	0.0	5.4e-10	39.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297620932|ref|YP_003709069.1|	-	4.7e-08	33.3	0.0	2.3e-07	31.0	0.0	2.1	3	0	0	3	3	2	1	Methyltransferase	domain
PrmA	PF06325.8	gi|297620932|ref|YP_003709069.1|	-	9.5e-08	31.4	0.0	1.7e-07	30.6	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_16	PF10294.4	gi|297620932|ref|YP_003709069.1|	-	0.00011	21.6	0.0	0.00017	21.1	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
UPF0020	PF01170.13	gi|297620932|ref|YP_003709069.1|	-	0.00055	19.5	0.0	0.00097	18.7	0.0	1.3	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_12	PF08242.7	gi|297620932|ref|YP_003709069.1|	-	0.00078	19.8	0.0	0.002	18.5	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297620932|ref|YP_003709069.1|	-	0.0021	18.5	0.0	0.0049	17.3	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|297620932|ref|YP_003709069.1|	-	0.004	16.2	0.1	0.0058	15.7	0.1	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_2	PF00891.13	gi|297620932|ref|YP_003709069.1|	-	0.0074	15.5	0.1	0.018	14.2	0.0	1.6	2	0	0	2	2	2	1	O-methyltransferase
MethyltransfD12	PF02086.10	gi|297620932|ref|YP_003709069.1|	-	0.014	14.8	0.0	0.1	12.0	0.0	1.8	1	1	1	2	2	2	0	D12	class	N6	adenine-specific	DNA	methyltransferase
Cons_hypoth95	PF03602.10	gi|297620932|ref|YP_003709069.1|	-	0.062	12.6	0.0	0.11	11.8	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
SRP54	PF00448.17	gi|297620933|ref|YP_003709070.1|	-	2.9e-74	248.7	0.1	5.4e-74	247.8	0.1	1.5	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.14	gi|297620933|ref|YP_003709070.1|	-	8.4e-28	96.6	2.0	8.4e-28	96.6	1.4	4.0	4	1	1	5	5	5	1	Signal	peptide	binding	domain
SRP54_N	PF02881.14	gi|297620933|ref|YP_003709070.1|	-	7.2e-19	67.6	2.5	7.2e-19	67.6	1.7	2.5	3	0	0	3	3	2	1	SRP54-type	protein,	helical	bundle	domain
AAA_22	PF13401.1	gi|297620933|ref|YP_003709070.1|	-	9.1e-07	29.0	0.1	2.8e-06	27.5	0.0	1.8	2	0	0	2	2	1	1	AAA	domain
MobB	PF03205.9	gi|297620933|ref|YP_003709070.1|	-	8.8e-06	25.4	0.2	0.00024	20.8	0.0	3.0	2	1	1	3	3	3	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_33	PF13671.1	gi|297620933|ref|YP_003709070.1|	-	3.9e-05	23.5	0.1	0.00011	22.1	0.0	1.8	2	0	0	2	2	1	1	AAA	domain
CbiA	PF01656.18	gi|297620933|ref|YP_003709070.1|	-	8.3e-05	22.0	5.6	0.00025	20.5	0.9	3.4	2	1	0	3	3	3	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_17	PF13207.1	gi|297620933|ref|YP_003709070.1|	-	0.002	18.9	0.0	0.0074	17.0	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|297620933|ref|YP_003709070.1|	-	0.0061	15.6	0.7	0.044	12.8	0.0	2.4	3	0	0	3	3	3	1	Zeta	toxin
Thymidylate_kin	PF02223.12	gi|297620933|ref|YP_003709070.1|	-	0.0099	15.2	0.1	0.0099	15.2	0.1	2.3	3	0	0	3	3	3	1	Thymidylate	kinase
APS_kinase	PF01583.15	gi|297620933|ref|YP_003709070.1|	-	0.016	14.8	0.0	0.071	12.7	0.0	2.0	2	0	0	2	2	2	0	Adenylylsulphate	kinase
RHH_1	PF01402.16	gi|297620933|ref|YP_003709070.1|	-	0.024	14.5	1.7	5.5	7.0	0.1	3.2	3	0	0	3	3	2	0	Ribbon-helix-helix	protein,	copG	family
PFK	PF00365.15	gi|297620933|ref|YP_003709070.1|	-	0.037	12.9	0.1	0.078	11.9	0.1	1.5	1	0	0	1	1	1	0	Phosphofructokinase
6PF2K	PF01591.13	gi|297620933|ref|YP_003709070.1|	-	0.038	13.0	0.0	0.12	11.3	0.0	1.8	2	0	0	2	2	2	0	6-phosphofructo-2-kinase
DUF4375	PF14300.1	gi|297620933|ref|YP_003709070.1|	-	0.043	13.8	2.1	9.8	6.1	0.0	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4375)
KTI12	PF08433.5	gi|297620933|ref|YP_003709070.1|	-	0.048	12.8	0.1	0.17	11.0	0.0	1.9	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
AAA_31	PF13614.1	gi|297620933|ref|YP_003709070.1|	-	0.068	13.0	0.5	12	5.8	0.0	3.0	3	1	0	3	3	3	0	AAA	domain
DUF1044	PF06296.7	gi|297620933|ref|YP_003709070.1|	-	0.07	12.9	1.8	0.1	12.4	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1044)
ATP_bind_1	PF03029.12	gi|297620933|ref|YP_003709070.1|	-	0.073	12.5	0.1	0.26	10.7	0.1	2.0	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
cobW	PF02492.14	gi|297620933|ref|YP_003709070.1|	-	0.082	12.3	2.2	0.25	10.7	0.4	2.5	2	1	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_19	PF13245.1	gi|297620933|ref|YP_003709070.1|	-	0.09	12.5	0.1	0.46	10.2	0.0	2.1	2	0	0	2	2	2	0	Part	of	AAA	domain
Ribosomal_S16	PF00886.14	gi|297620934|ref|YP_003709071.1|	-	1.1e-22	79.4	0.1	1.8e-22	78.7	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S16
YccV-like	PF08755.6	gi|297620934|ref|YP_003709071.1|	-	0.073	13.0	0.0	0.11	12.4	0.0	1.6	1	1	0	1	1	1	0	Hemimethylated	DNA-binding	protein	YccV	like
tRNA_m1G_MT	PF01746.16	gi|297620935|ref|YP_003709072.1|	-	2.6e-52	177.1	0.0	3e-52	176.9	0.0	1.0	1	0	0	1	1	1	1	tRNA	(Guanine-1)-methyltransferase
SPOUT_MTase	PF02590.12	gi|297620935|ref|YP_003709072.1|	-	0.16	11.6	0.0	0.24	11.1	0.0	1.2	1	0	0	1	1	1	0	Predicted	SPOUT	methyltransferase
Ribosomal_L19	PF01245.15	gi|297620936|ref|YP_003709073.1|	-	4.2e-44	148.9	1.3	6.1e-44	148.4	0.9	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L19
RNase_HII	PF01351.13	gi|297620937|ref|YP_003709074.1|	-	1.3e-40	139.1	0.0	1.7e-40	138.7	0.0	1.1	1	0	0	1	1	1	1	Ribonuclease	HII
AMP-binding	PF00501.23	gi|297620938|ref|YP_003709075.1|	-	5.5e-69	232.5	0.0	8e-69	232.0	0.0	1.2	1	0	0	1	1	1	1	AMP-binding	enzyme
PP-binding	PF00550.20	gi|297620938|ref|YP_003709075.1|	-	7.8e-06	26.0	0.2	1.6e-05	25.0	0.1	1.6	1	0	0	1	1	1	1	Phosphopantetheine	attachment	site
Acyltransferase	PF01553.16	gi|297620938|ref|YP_003709075.1|	-	0.0001	21.7	0.0	0.0026	17.2	0.0	2.4	2	0	0	2	2	2	1	Acyltransferase
Ank	PF00023.25	gi|297620939|ref|YP_003709076.1|	-	4e-12	45.2	0.2	2.5e-05	23.8	0.1	2.9	2	0	0	2	2	2	2	Ankyrin	repeat
Ank_2	PF12796.2	gi|297620939|ref|YP_003709076.1|	-	4.9e-12	46.0	0.0	1.2e-11	44.7	0.0	1.7	1	0	0	1	1	1	1	Ankyrin	repeats	(3	copies)
Ank_4	PF13637.1	gi|297620939|ref|YP_003709076.1|	-	6.5e-09	36.0	0.4	5e-06	26.8	0.0	3.9	2	1	2	4	4	4	2	Ankyrin	repeats	(many	copies)
Ank_3	PF13606.1	gi|297620939|ref|YP_003709076.1|	-	3e-08	33.1	0.2	0.0012	18.9	0.1	3.3	2	0	0	2	2	2	2	Ankyrin	repeat
Ank_5	PF13857.1	gi|297620939|ref|YP_003709076.1|	-	1.1e-05	25.4	0.5	0.062	13.5	0.0	3.0	1	1	1	2	2	2	2	Ankyrin	repeats	(many	copies)
YicC_N	PF03755.8	gi|297620941|ref|YP_003709078.1|	-	4.5e-36	124.1	0.3	1.7e-35	122.2	0.0	2.0	2	1	0	2	2	2	1	YicC-like	family,	N-terminal	region
DUF1732	PF08340.6	gi|297620941|ref|YP_003709078.1|	-	2.3e-33	113.8	4.5	2.3e-33	113.8	3.1	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1732)
UPF0061	PF02696.9	gi|297620941|ref|YP_003709078.1|	-	0.022	13.0	1.0	0.028	12.7	0.7	1.1	1	0	0	1	1	1	0	Uncharacterized	ACR,	YdiU/UPF0061	family
DUF4239	PF14023.1	gi|297620941|ref|YP_003709078.1|	-	0.05	12.9	1.1	0.13	11.6	0.4	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4239)
RNase_E_G	PF10150.4	gi|297620941|ref|YP_003709078.1|	-	0.079	12.1	3.2	0.086	12.0	1.8	1.4	1	1	0	1	1	1	0	Ribonuclease	E/G	family
PAS_7	PF12860.2	gi|297620941|ref|YP_003709078.1|	-	0.079	12.9	0.2	10	6.1	0.1	2.6	3	0	0	3	3	3	0	PAS	fold
G-gamma	PF00631.17	gi|297620941|ref|YP_003709078.1|	-	0.48	10.2	4.5	8.4	6.2	0.1	3.4	3	0	0	3	3	3	0	GGL	domain
Syntaxin	PF00804.20	gi|297620941|ref|YP_003709078.1|	-	2.7	8.2	7.1	4	7.6	1.0	2.7	2	1	0	2	2	2	0	Syntaxin
Cep57_CLD_2	PF14197.1	gi|297620941|ref|YP_003709078.1|	-	2.7	7.9	10.6	9.8	6.2	0.7	3.0	2	2	0	2	2	2	0	Centrosome	localisation	domain	of	PPC89
Guanylate_kin	PF00625.16	gi|297620942|ref|YP_003709079.1|	-	2.9e-47	160.4	0.0	3.5e-47	160.2	0.0	1.0	1	0	0	1	1	1	1	Guanylate	kinase
AAA_18	PF13238.1	gi|297620942|ref|YP_003709079.1|	-	4.9e-07	30.1	0.2	1.1e-06	29.0	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|297620942|ref|YP_003709079.1|	-	8.8e-06	26.5	1.4	5.5e-05	23.9	0.4	2.1	1	1	1	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|297620942|ref|YP_003709079.1|	-	7.5e-05	22.6	0.0	0.00046	20.0	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
Thymidylate_kin	PF02223.12	gi|297620942|ref|YP_003709079.1|	-	0.0015	17.8	0.3	0.0041	16.5	0.0	1.7	1	1	1	2	2	2	1	Thymidylate	kinase
AAA_19	PF13245.1	gi|297620942|ref|YP_003709079.1|	-	0.0016	18.1	0.0	0.0035	17.0	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|297620942|ref|YP_003709079.1|	-	0.003	17.7	0.0	0.0071	16.4	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297620942|ref|YP_003709079.1|	-	0.018	15.0	0.1	0.13	12.2	0.0	2.2	1	1	2	3	3	3	0	AAA	ATPase	domain
T2SE	PF00437.15	gi|297620942|ref|YP_003709079.1|	-	0.024	13.5	0.0	0.036	12.9	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
UPF0079	PF02367.12	gi|297620942|ref|YP_003709079.1|	-	0.032	13.8	0.0	0.055	13.0	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
MMR_HSR1	PF01926.18	gi|297620942|ref|YP_003709079.1|	-	0.041	13.8	0.0	0.084	12.8	0.0	1.6	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_30	PF13604.1	gi|297620942|ref|YP_003709079.1|	-	0.047	13.2	0.0	0.091	12.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
CoaE	PF01121.15	gi|297620942|ref|YP_003709079.1|	-	0.083	12.2	0.2	6.1	6.1	0.0	2.9	2	1	1	3	3	3	0	Dephospho-CoA	kinase
AAA_25	PF13481.1	gi|297620942|ref|YP_003709079.1|	-	0.085	12.2	0.4	0.25	10.7	0.0	1.9	3	0	0	3	3	3	0	AAA	domain
AAA	PF00004.24	gi|297620942|ref|YP_003709079.1|	-	0.096	12.8	0.0	0.15	12.2	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.1	gi|297620942|ref|YP_003709079.1|	-	0.22	11.0	1.5	0.84	9.1	0.1	2.2	2	1	0	3	3	3	0	AAA	domain
2C_adapt	PF08793.5	gi|297620944|ref|YP_003709081.1|	-	0.035	13.9	0.1	0.071	13.0	0.1	1.5	1	0	0	1	1	1	0	2-cysteine	adaptor	domain
tRNA-synt_1g	PF09334.6	gi|297620945|ref|YP_003709082.1|	-	3.2e-140	467.2	0.0	4e-140	466.9	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA_bind	PF01588.15	gi|297620945|ref|YP_003709082.1|	-	2.2e-27	94.7	0.4	4.9e-27	93.6	0.3	1.6	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
tRNA-synt_1	PF00133.17	gi|297620945|ref|YP_003709082.1|	-	3.1e-22	78.3	1.2	2.6e-06	25.7	0.0	3.8	2	2	1	3	3	3	3	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|297620945|ref|YP_003709082.1|	-	6.5e-14	51.9	0.0	1.2e-13	51.1	0.0	1.4	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
Ribosomal_L28	PF00830.14	gi|297620946|ref|YP_003709083.1|	-	7.5e-26	89.7	2.2	9.2e-26	89.4	1.5	1.1	1	0	0	1	1	1	1	Ribosomal	L28	family
Antimicrobial_3	PF08025.6	gi|297620946|ref|YP_003709083.1|	-	3	7.6	6.2	9.1	6.1	1.8	2.6	2	1	0	2	2	2	0	Spider	antimicrobial	peptide
Peptidase_M13_N	PF05649.8	gi|297620947|ref|YP_003709084.1|	-	5.5e-85	285.7	0.3	7.6e-85	285.3	0.2	1.2	1	0	0	1	1	1	1	Peptidase	family	M13
Peptidase_M13	PF01431.16	gi|297620947|ref|YP_003709084.1|	-	8.9e-57	191.5	0.0	1.7e-56	190.6	0.0	1.5	1	0	0	1	1	1	1	Peptidase	family	M13
zf-FCS	PF06467.9	gi|297620947|ref|YP_003709084.1|	-	0.00096	18.7	1.8	0.0027	17.2	1.3	1.7	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF3330	PF11809.3	gi|297620947|ref|YP_003709084.1|	-	0.0094	15.7	0.3	0.019	14.8	0.2	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3330)
Turandot	PF07240.6	gi|297620948|ref|YP_003709085.1|	-	0.23	11.0	1.9	0.28	10.6	0.7	1.6	1	1	0	1	1	1	0	Stress-inducible	humoral	factor	Turandot
TMPIT	PF07851.8	gi|297620948|ref|YP_003709085.1|	-	0.36	9.8	4.7	0.41	9.6	3.2	1.1	1	0	0	1	1	1	0	TMPIT-like	protein
DUF4065	PF13274.1	gi|297620948|ref|YP_003709085.1|	-	0.71	10.5	6.8	0.63	10.7	3.9	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4065)
Atg14	PF10186.4	gi|297620948|ref|YP_003709085.1|	-	1.3	7.8	5.8	1.6	7.5	4.1	1.1	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Vpu	PF00558.14	gi|297620948|ref|YP_003709085.1|	-	2.1	7.9	6.4	4.8	6.8	4.3	1.7	1	1	0	1	1	1	0	Vpu	protein
Pyr_redox_2	PF07992.9	gi|297620949|ref|YP_003709086.1|	-	1.2e-31	110.1	0.0	1.6e-31	109.7	0.0	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|297620949|ref|YP_003709086.1|	-	3.3e-27	94.6	0.1	9.1e-27	93.2	0.0	1.8	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|297620949|ref|YP_003709086.1|	-	1.9e-21	76.2	0.5	3.8e-15	56.0	0.0	2.6	3	0	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|297620949|ref|YP_003709086.1|	-	2.2e-09	37.2	0.6	5.2e-05	23.1	0.0	2.7	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.1	gi|297620949|ref|YP_003709086.1|	-	6.2e-09	36.2	0.0	9.4e-08	32.3	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|297620949|ref|YP_003709086.1|	-	1.4e-08	34.5	0.2	0.0056	16.2	0.1	2.3	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
HI0933_like	PF03486.9	gi|297620949|ref|YP_003709086.1|	-	5.8e-08	31.6	2.4	1.6e-06	26.8	0.4	2.7	3	0	0	3	3	3	1	HI0933-like	protein
FAD_binding_2	PF00890.19	gi|297620949|ref|YP_003709086.1|	-	1.6e-07	30.5	1.7	1.9e-07	30.2	0.2	1.8	2	0	0	2	2	2	1	FAD	binding	domain
DAO	PF01266.19	gi|297620949|ref|YP_003709086.1|	-	2.2e-07	30.0	1.9	0.0021	17.0	0.0	2.8	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|297620949|ref|YP_003709086.1|	-	3.4e-07	29.7	0.0	5.8e-07	28.9	0.0	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|297620949|ref|YP_003709086.1|	-	2.7e-06	26.4	0.1	0.00033	19.6	0.0	2.8	3	0	0	3	3	3	1	Glucose	inhibited	division	protein	A
FAD_binding_3	PF01494.14	gi|297620949|ref|YP_003709086.1|	-	6.6e-06	25.4	0.6	0.012	14.7	0.1	2.2	2	0	0	2	2	2	2	FAD	binding	domain
TrkA_N	PF02254.13	gi|297620949|ref|YP_003709086.1|	-	4.4e-05	23.4	0.4	0.66	9.9	0.0	3.4	3	1	0	3	3	3	2	TrkA-N	domain
NAD_binding_7	PF13241.1	gi|297620949|ref|YP_003709086.1|	-	9.5e-05	22.5	0.0	0.19	11.9	0.0	2.4	2	0	0	2	2	2	2	Putative	NAD(P)-binding
3HCDH_N	PF02737.13	gi|297620949|ref|YP_003709086.1|	-	0.00012	21.7	0.5	0.011	15.3	0.0	2.7	2	1	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
XdhC_C	PF13478.1	gi|297620949|ref|YP_003709086.1|	-	0.00021	21.6	0.0	0.17	12.1	0.0	2.7	2	1	0	2	2	2	1	XdhC	Rossmann	domain
Thi4	PF01946.12	gi|297620949|ref|YP_003709086.1|	-	0.0004	19.5	0.8	0.00063	18.9	0.1	1.7	2	0	0	2	2	2	1	Thi4	family
2-Hacid_dh_C	PF02826.14	gi|297620949|ref|YP_003709086.1|	-	0.0016	17.5	2.3	0.14	11.2	0.0	2.9	3	0	0	3	3	3	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Lycopene_cycl	PF05834.7	gi|297620949|ref|YP_003709086.1|	-	0.0023	16.8	0.0	0.013	14.4	0.0	2.1	2	0	0	2	2	2	1	Lycopene	cyclase	protein
UDPG_MGDP_dh_N	PF03721.9	gi|297620949|ref|YP_003709086.1|	-	0.014	14.7	0.1	0.88	8.9	0.0	2.5	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
K_oxygenase	PF13434.1	gi|297620949|ref|YP_003709086.1|	-	0.037	12.9	0.0	0.13	11.0	0.0	1.8	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
CPSase_L_chain	PF00289.17	gi|297620949|ref|YP_003709086.1|	-	0.063	13.3	0.0	2.9	8.0	0.0	2.9	3	0	0	3	3	2	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
DUF4014	PF13198.1	gi|297620950|ref|YP_003709087.1|	-	0.17	12.2	3.7	0.16	12.4	1.6	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4014)
Mem_trans	PF03547.13	gi|297620950|ref|YP_003709087.1|	-	0.74	8.0	5.2	0.9	7.7	3.6	1.1	1	0	0	1	1	1	0	Membrane	transport	protein
DUF1469	PF07332.6	gi|297620950|ref|YP_003709087.1|	-	0.9	9.2	6.0	4.3	7.0	2.7	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1469)
DUF2244	PF10003.4	gi|297620950|ref|YP_003709087.1|	-	1.6	8.0	8.6	0.16	11.3	2.1	1.9	2	0	0	2	2	2	0	Integral	membrane	protein	(DUF2244)
zf-DHHC	PF01529.15	gi|297620950|ref|YP_003709087.1|	-	1.8	7.9	6.4	2.4	7.5	4.5	1.2	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
RRM_1	PF00076.17	gi|297620951|ref|YP_003709088.1|	-	1.3e-26	91.9	0.4	1.7e-26	91.6	0.3	1.1	1	0	0	1	1	1	1	RNA	recognition	motif.	(a.k.a.	RRM,	RBD,	or	RNP	domain)
RRM_6	PF14259.1	gi|297620951|ref|YP_003709088.1|	-	1.9e-17	62.9	0.0	2.5e-17	62.6	0.0	1.1	1	0	0	1	1	1	1	RNA	recognition	motif	(a.k.a.	RRM,	RBD,	or	RNP	domain)
RRM_5	PF13893.1	gi|297620951|ref|YP_003709088.1|	-	5.4e-11	42.1	0.1	6.7e-11	41.8	0.0	1.1	1	0	0	1	1	1	1	RNA	recognition	motif.	(a.k.a.	RRM,	RBD,	or	RNP	domain)
Limkain-b1	PF11608.3	gi|297620951|ref|YP_003709088.1|	-	0.0098	15.6	0.1	0.0098	15.6	0.1	1.2	1	1	0	1	1	1	1	Limkain	b1
RRM_3	PF08777.6	gi|297620951|ref|YP_003709088.1|	-	0.054	13.3	0.4	0.1	12.4	0.2	1.5	1	1	0	1	1	1	0	RNA	binding	motif
OB_RNB	PF08206.6	gi|297620951|ref|YP_003709088.1|	-	0.18	11.3	0.8	0.34	10.4	0.1	1.8	2	0	0	2	2	2	0	Ribonuclease	B	OB	domain
TPR_11	PF13414.1	gi|297620953|ref|YP_003709090.1|	-	3.7e-09	36.1	0.8	3.4e-05	23.3	0.0	2.7	2	1	1	3	3	3	2	TPR	repeat
TPR_2	PF07719.12	gi|297620953|ref|YP_003709090.1|	-	1.1e-05	24.9	0.4	0.054	13.4	0.0	3.5	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|297620953|ref|YP_003709090.1|	-	1.9e-05	24.0	0.7	0.19	11.3	0.0	3.7	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|297620953|ref|YP_003709090.1|	-	2e-05	24.3	0.0	0.095	12.5	0.0	2.4	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297620953|ref|YP_003709090.1|	-	4.1e-05	23.0	0.0	0.66	9.8	0.0	4.2	5	0	0	5	5	5	2	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297620953|ref|YP_003709090.1|	-	0.0013	18.6	1.5	1.8	8.5	0.0	3.0	2	1	0	3	3	2	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297620953|ref|YP_003709090.1|	-	0.0096	16.0	0.9	0.21	11.7	0.2	2.4	1	1	2	3	3	3	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_3	PF07720.7	gi|297620953|ref|YP_003709090.1|	-	0.015	15.0	0.9	0.089	12.6	0.4	2.3	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297620953|ref|YP_003709090.1|	-	0.048	14.3	0.0	6.7	7.5	0.0	3.0	2	1	1	3	3	3	0	Tetratricopeptide	repeat
PilO	PF04350.8	gi|297620953|ref|YP_003709090.1|	-	0.051	13.4	0.2	0.11	12.4	0.1	1.5	1	0	0	1	1	1	0	Pilus	assembly	protein,	PilO
TPR_19	PF14559.1	gi|297620953|ref|YP_003709090.1|	-	0.068	13.5	0.1	0.97	9.8	0.0	2.7	3	0	0	3	3	3	0	Tetratricopeptide	repeat
DUF1154	PF06631.6	gi|297620953|ref|YP_003709090.1|	-	0.19	11.4	5.0	0.11	12.1	1.6	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1154)
Malate_synthase	PF01274.17	gi|297620954|ref|YP_003709091.1|	-	5.5e-203	674.7	0.0	6.2e-203	674.5	0.0	1.0	1	0	0	1	1	1	1	Malate	synthase
HpcH_HpaI	PF03328.9	gi|297620954|ref|YP_003709091.1|	-	0.025	13.4	0.0	4.1	6.2	0.0	2.9	3	0	0	3	3	3	0	HpcH/HpaI	aldolase/citrate	lyase	family
ICL	PF00463.16	gi|297620955|ref|YP_003709092.1|	-	5.2e-142	473.7	2.0	4.4e-76	256.1	0.1	2.0	1	1	1	2	2	2	2	Isocitrate	lyase	family
PEP_mutase	PF13714.1	gi|297620955|ref|YP_003709092.1|	-	3.4e-20	72.2	0.2	5e-20	71.7	0.1	1.2	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
EamA	PF00892.15	gi|297620956|ref|YP_003709093.1|	-	6.8e-15	55.2	23.0	6.1e-08	32.7	3.3	2.7	2	2	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|297620956|ref|YP_003709093.1|	-	3.2e-05	24.1	3.1	3.2e-05	24.1	2.2	2.8	3	1	0	3	3	3	2	Multidrug	resistance	efflux	transporter
DUF751	PF05421.6	gi|297620956|ref|YP_003709093.1|	-	0.039	14.2	3.2	0.11	12.8	0.3	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF751)
Peptidase_M24	PF00557.19	gi|297620957|ref|YP_003709094.1|	-	1.5e-43	148.7	0.0	3.6e-43	147.5	0.0	1.5	2	0	0	2	2	2	1	Metallopeptidase	family	M24
SEC-C	PF02810.10	gi|297620957|ref|YP_003709094.1|	-	2.4e-11	42.8	8.3	5.6e-11	41.7	5.7	1.7	1	0	0	1	1	1	1	SEC-C	motif
Methyltransf_4	PF02390.12	gi|297620958|ref|YP_003709095.1|	-	4.9e-47	159.5	0.0	5.6e-47	159.3	0.0	1.1	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_26	PF13659.1	gi|297620958|ref|YP_003709095.1|	-	2.9e-07	30.5	0.0	4.2e-07	29.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|297620958|ref|YP_003709095.1|	-	1.1e-05	24.8	0.0	1.5e-05	24.4	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|297620958|ref|YP_003709095.1|	-	5.8e-05	22.7	0.0	7.3e-05	22.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297620958|ref|YP_003709095.1|	-	0.0023	18.4	0.0	0.0047	17.4	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
DUF2431	PF10354.4	gi|297620958|ref|YP_003709095.1|	-	0.026	14.4	0.0	0.075	12.9	0.0	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF2431)
Spermine_synth	PF01564.12	gi|297620958|ref|YP_003709095.1|	-	0.042	12.7	0.0	0.06	12.2	0.0	1.2	1	0	0	1	1	1	0	Spermine/spermidine	synthase
Methyltransf_23	PF13489.1	gi|297620958|ref|YP_003709095.1|	-	0.055	13.1	0.0	0.67	9.6	0.0	2.1	1	1	0	1	1	1	0	Methyltransferase	domain
MobA_MobL	PF03389.10	gi|297620958|ref|YP_003709095.1|	-	0.087	12.2	0.3	0.18	11.1	0.2	1.5	1	0	0	1	1	1	0	MobA/MobL	family
DUF2317	PF10079.4	gi|297620959|ref|YP_003709096.1|	-	3.6e-94	316.3	0.0	4.1e-86	289.7	0.0	2.0	1	1	1	2	2	2	2	Uncharacterized	protein	conserved	in	bacteria	(DUF2317)
Glyco_hydro_16	PF00722.16	gi|297620959|ref|YP_003709096.1|	-	0.2	10.8	0.0	0.34	10.1	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	hydrolases	family	16
H_PPase	PF03030.11	gi|297620961|ref|YP_003709098.1|	-	5e-277	920.6	37.4	5.7e-277	920.4	25.9	1.0	1	0	0	1	1	1	1	Inorganic	H+	pyrophosphatase
Endomucin	PF07010.7	gi|297620961|ref|YP_003709098.1|	-	7	5.9	7.4	0.41	9.9	0.6	2.0	2	0	0	2	2	2	0	Endomucin
PGI	PF00342.14	gi|297620962|ref|YP_003709099.1|	-	6.3e-119	397.5	0.0	1e-118	396.8	0.0	1.3	1	0	0	1	1	1	1	Phosphoglucose	isomerase
Phage_integrase	PF00589.17	gi|297620964|ref|YP_003709101.1|	-	8.4e-50	168.8	0.1	1.2e-49	168.3	0.0	1.2	1	0	0	1	1	1	1	Phage	integrase	family
Phage_int_SAM_1	PF02899.12	gi|297620964|ref|YP_003709101.1|	-	1.3e-21	76.4	0.1	1.7e-20	72.9	0.0	2.5	2	1	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_4	PF13495.1	gi|297620964|ref|YP_003709101.1|	-	7.5e-13	48.6	0.0	2.6e-12	46.9	0.0	1.9	2	0	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
Integrase_1	PF12835.2	gi|297620964|ref|YP_003709101.1|	-	0.00016	21.5	0.0	0.00026	20.8	0.0	1.4	1	0	0	1	1	1	1	Integrase
NTase_sub_bind	PF08780.6	gi|297620964|ref|YP_003709101.1|	-	0.048	13.4	0.0	0.11	12.2	0.0	1.6	1	0	0	1	1	1	0	Nucleotidyltransferase	substrate	binding	protein	like
JmjN	PF02375.12	gi|297620964|ref|YP_003709101.1|	-	0.19	11.2	0.5	36	3.9	0.2	3.3	3	0	0	3	3	3	0	jmjN	domain
TPR_11	PF13414.1	gi|297620966|ref|YP_003709103.1|	-	1.2e-14	53.6	2.8	5e-08	32.4	0.2	2.3	1	1	1	2	2	2	2	TPR	repeat
TPR_19	PF14559.1	gi|297620966|ref|YP_003709103.1|	-	3.4e-11	43.2	0.3	1.3e-06	28.6	0.2	2.3	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297620966|ref|YP_003709103.1|	-	4.6e-10	39.9	1.2	1.2e-06	28.9	0.0	2.3	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297620966|ref|YP_003709103.1|	-	1.5e-07	30.8	2.0	0.16	11.9	0.1	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|297620966|ref|YP_003709103.1|	-	7.2e-07	28.9	0.0	0.04	14.1	0.0	2.9	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|297620966|ref|YP_003709103.1|	-	1.1e-06	28.0	1.4	0.049	13.2	0.0	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|297620966|ref|YP_003709103.1|	-	3.8e-06	27.0	1.3	0.11	13.1	0.0	3.3	2	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_3	PF07720.7	gi|297620966|ref|YP_003709103.1|	-	8.6e-06	25.4	6.0	0.049	13.4	0.0	3.9	4	1	0	4	4	3	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297620966|ref|YP_003709103.1|	-	7.5e-05	22.7	0.3	0.0042	17.1	0.0	2.3	1	1	1	2	2	2	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_9	PF13371.1	gi|297620966|ref|YP_003709103.1|	-	0.00043	20.0	0.2	0.014	15.1	0.2	2.1	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|297620966|ref|YP_003709103.1|	-	0.0013	18.3	0.4	2.6	8.0	0.0	2.7	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|297620966|ref|YP_003709103.1|	-	0.0013	19.0	1.8	1.3	9.6	0.2	3.4	3	0	0	3	3	3	1	Tetratricopeptide	repeat
SgrR_N	PF12793.2	gi|297620966|ref|YP_003709103.1|	-	0.011	15.7	0.0	0.021	14.8	0.0	1.4	1	0	0	1	1	1	0	Sugar	transport-related	sRNA	regulator	N-term
HrpB1_HrpK	PF09613.5	gi|297620966|ref|YP_003709103.1|	-	0.019	14.4	0.0	0.033	13.6	0.0	1.3	1	1	0	1	1	1	0	Bacterial	type	III	secretion	protein	(HrpB1_HrpK)
TPR_20	PF14561.1	gi|297620966|ref|YP_003709103.1|	-	0.045	13.8	0.5	4.5	7.4	0.1	2.7	1	1	2	3	3	3	0	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297620966|ref|YP_003709103.1|	-	0.15	11.9	2.6	1.1	9.1	0.1	2.9	3	0	0	3	3	3	0	Tetratricopeptide	repeat
Lum_binding	PF00677.12	gi|297620967|ref|YP_003709104.1|	-	2e-39	133.3	0.3	1.2e-19	69.9	0.0	2.1	2	0	0	2	2	2	2	Lumazine	binding	domain
Antitoxin-MazE	PF04014.13	gi|297620967|ref|YP_003709104.1|	-	0.014	15.0	0.4	5.4	6.8	0.0	2.8	2	1	0	2	2	2	0	Antidote-toxin	recognition	MazE
Toluene_X	PF03349.11	gi|297620968|ref|YP_003709105.1|	-	8.1e-39	133.1	0.0	9.6e-39	132.9	0.0	1.0	1	0	0	1	1	1	1	Outer	membrane	protein	transport	protein	(OMPP1/FadL/TodX)
DUF2490	PF10677.4	gi|297620968|ref|YP_003709105.1|	-	4.6e-05	22.7	0.1	0.0018	17.6	0.0	2.1	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2490)
DUF1597	PF07642.6	gi|297620968|ref|YP_003709105.1|	-	0.0027	16.7	0.1	0.015	14.3	0.1	2.3	1	1	0	1	1	1	1	Outer	membrane	protein	family	(DUF1597)
OMP_b-brl	PF13505.1	gi|297620968|ref|YP_003709105.1|	-	0.061	13.2	0.0	0.13	12.2	0.0	1.6	1	1	0	1	1	1	0	Outer	membrane	protein	beta-barrel	domain
ENT	PF03735.9	gi|297620968|ref|YP_003709105.1|	-	0.15	11.8	0.0	0.21	11.3	0.0	1.3	1	0	0	1	1	1	0	ENT	domain
DDE_Tnp_1	PF01609.16	gi|297620969|ref|YP_003709106.1|	-	2.8e-15	56.4	1.1	6.2e-15	55.3	0.7	1.5	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_2	PF13586.1	gi|297620969|ref|YP_003709106.1|	-	2.8e-14	53.0	0.3	3.9e-14	52.6	0.2	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|297620969|ref|YP_003709106.1|	-	0.0023	17.6	0.0	0.0079	15.9	0.0	1.7	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_4	PF13359.1	gi|297620969|ref|YP_003709106.1|	-	0.014	14.9	0.0	0.017	14.6	0.0	1.1	1	0	0	1	1	1	0	DDE	superfamily	endonuclease
UvdE	PF03851.9	gi|297620969|ref|YP_003709106.1|	-	0.14	11.1	0.0	0.19	10.6	0.0	1.3	1	0	0	1	1	1	0	UV-endonuclease	UvdE
DUF4096	PF13340.1	gi|297620970|ref|YP_003709107.1|	-	2.6e-16	59.2	0.6	2.6e-16	59.2	0.4	1.8	2	1	0	2	2	2	1	Putative	transposase	of	IS4/5	family	(DUF4096)
Toluene_X	PF03349.11	gi|297620971|ref|YP_003709108.1|	-	8.8e-46	156.1	1.7	1.1e-45	155.8	1.2	1.0	1	0	0	1	1	1	1	Outer	membrane	protein	transport	protein	(OMPP1/FadL/TodX)
OMP_b-brl_2	PF13568.1	gi|297620971|ref|YP_003709108.1|	-	0.015	15.1	0.2	0.025	14.4	0.1	1.3	1	1	0	1	1	1	0	Outer	membrane	protein	beta-barrel	domain
OMP_b-brl	PF13505.1	gi|297620971|ref|YP_003709108.1|	-	0.077	12.9	2.3	0.12	12.2	1.6	1.4	1	1	0	1	1	1	0	Outer	membrane	protein	beta-barrel	domain
Asparaginase_II	PF06089.7	gi|297620972|ref|YP_003709109.1|	-	1.5e-91	306.5	0.1	1.8e-91	306.2	0.1	1.0	1	0	0	1	1	1	1	L-asparaginase	II
Ten1_2	PF15490.1	gi|297620972|ref|YP_003709109.1|	-	0.011	15.2	0.0	0.019	14.5	0.0	1.3	1	0	0	1	1	1	0	Telomere-capping,	CST	complex	subunit
CBS	PF00571.23	gi|297620972|ref|YP_003709109.1|	-	0.07	12.9	0.1	8.1	6.3	0.1	3.1	2	1	1	3	3	3	0	CBS	domain
GatB_N	PF02934.10	gi|297620973|ref|YP_003709110.1|	-	1.1e-109	365.8	0.0	1.4e-109	365.4	0.0	1.1	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|297620973|ref|YP_003709110.1|	-	5.6e-43	146.1	0.0	8.8e-43	145.5	0.0	1.3	1	0	0	1	1	1	1	GatB	domain
Amidase	PF01425.16	gi|297620974|ref|YP_003709111.1|	-	1.7e-142	475.3	0.0	1.9e-142	475.1	0.0	1.0	1	0	0	1	1	1	1	Amidase
Glu-tRNAGln	PF02686.10	gi|297620975|ref|YP_003709112.1|	-	4.2e-26	90.5	0.3	6.7e-26	89.8	0.2	1.3	1	0	0	1	1	1	1	Glu-tRNAGln	amidotransferase	C	subunit
Nitr_red_bet_C	PF14711.1	gi|297620975|ref|YP_003709112.1|	-	0.021	14.3	0.1	0.035	13.6	0.0	1.5	1	1	0	1	1	1	0	Respiratory	nitrate	reductase	beta	C-terminal
Caudo_TAP	PF02413.12	gi|297620975|ref|YP_003709112.1|	-	0.048	13.8	0.5	0.12	12.5	0.3	1.5	1	1	0	1	1	1	0	Caudovirales	tail	fibre	assembly	protein
His_kinase	PF06580.8	gi|297620975|ref|YP_003709112.1|	-	0.15	12.0	0.5	0.24	11.3	0.3	1.3	1	0	0	1	1	1	0	Histidine	kinase
UPF0449	PF15136.1	gi|297620976|ref|YP_003709113.1|	-	0.13	12.4	0.4	6.5	7.0	0.5	2.7	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0449
Redoxin	PF08534.5	gi|297620977|ref|YP_003709114.1|	-	9.6e-21	73.8	0.0	1.1e-20	73.6	0.0	1.1	1	0	0	1	1	1	1	Redoxin
AhpC-TSA	PF00578.16	gi|297620977|ref|YP_003709114.1|	-	2.3e-18	66.0	0.0	2.8e-18	65.7	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Thioredoxin_8	PF13905.1	gi|297620977|ref|YP_003709114.1|	-	2.9e-05	24.0	0.2	4.5e-05	23.4	0.1	1.2	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|297620977|ref|YP_003709114.1|	-	0.00043	20.4	0.2	0.0013	18.8	0.1	1.8	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin	PF00085.15	gi|297620977|ref|YP_003709114.1|	-	0.033	13.8	0.0	0.095	12.3	0.0	1.8	1	1	0	1	1	1	0	Thioredoxin
CGGC	PF08821.6	gi|297620977|ref|YP_003709114.1|	-	0.082	12.9	0.0	0.14	12.2	0.0	1.3	1	0	0	1	1	1	0	CGGC	domain
DUF1731	PF08338.6	gi|297620978|ref|YP_003709115.1|	-	2.5e-17	62.0	0.4	4.3e-17	61.3	0.3	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1731)
Epimerase	PF01370.16	gi|297620978|ref|YP_003709115.1|	-	2.8e-14	53.1	0.0	7.5e-14	51.7	0.0	1.6	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_10	PF13460.1	gi|297620978|ref|YP_003709115.1|	-	5.5e-10	39.5	0.0	6.9e-10	39.2	0.0	1.1	1	0	0	1	1	1	1	NADH(P)-binding
RmlD_sub_bind	PF04321.12	gi|297620978|ref|YP_003709115.1|	-	0.00083	18.3	0.0	0.001	18.0	0.0	1.3	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
NmrA	PF05368.8	gi|297620978|ref|YP_003709115.1|	-	0.1	11.8	0.0	0.14	11.3	0.0	1.2	1	0	0	1	1	1	0	NmrA-like	family
E1-E2_ATPase	PF00122.15	gi|297620979|ref|YP_003709116.1|	-	3.1e-39	134.3	0.0	3.1e-39	134.3	0.0	2.5	2	1	0	2	2	2	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|297620979|ref|YP_003709116.1|	-	3.3e-34	119.1	0.7	4.7e-34	118.6	0.5	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|297620979|ref|YP_003709116.1|	-	2.4e-11	44.1	0.1	4.7e-10	39.9	0.0	2.4	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|297620979|ref|YP_003709116.1|	-	0.0014	18.2	2.2	0.89	9.0	0.5	2.5	1	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HTH_26	PF13443.1	gi|297620979|ref|YP_003709116.1|	-	0.081	13.1	0.0	0.21	11.8	0.0	1.6	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
Pribosyltran	PF00156.22	gi|297620980|ref|YP_003709117.1|	-	4.1e-19	68.5	0.0	4.8e-19	68.3	0.0	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PRTase_2	PF15609.1	gi|297620980|ref|YP_003709117.1|	-	0.073	12.3	0.0	0.1	11.9	0.0	1.2	1	0	0	1	1	1	0	Phosphoribosyl	transferase
rve_3	PF13683.1	gi|297620981|ref|YP_003709118.1|	-	7.3e-08	31.8	0.1	1.5e-07	30.8	0.0	1.5	1	0	0	1	1	1	1	Integrase	core	domain
rve	PF00665.21	gi|297620981|ref|YP_003709118.1|	-	4.3e-07	30.0	0.0	8e-07	29.1	0.0	1.5	1	1	0	1	1	1	1	Integrase	core	domain
IstB_IS21	PF01695.12	gi|297620984|ref|YP_003709121.1|	-	8.4e-62	207.7	0.3	2.1e-61	206.4	0.0	1.6	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
Bac_DnaA	PF00308.13	gi|297620984|ref|YP_003709121.1|	-	8.5e-08	32.1	0.1	1.3e-07	31.5	0.0	1.2	1	0	0	1	1	1	1	Bacterial	dnaA	protein
PhoH	PF02562.11	gi|297620984|ref|YP_003709121.1|	-	0.00026	20.2	0.1	0.00074	18.7	0.1	1.8	1	1	1	2	2	2	1	PhoH-like	protein
AAA_22	PF13401.1	gi|297620984|ref|YP_003709121.1|	-	0.0017	18.4	0.1	0.36	10.9	0.0	2.5	1	1	1	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|297620984|ref|YP_003709121.1|	-	0.0034	17.5	0.0	0.0071	16.5	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|297620984|ref|YP_003709121.1|	-	0.009	15.4	0.1	0.016	14.6	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297620984|ref|YP_003709121.1|	-	0.012	15.5	1.5	0.042	13.8	0.3	2.4	2	1	0	2	2	2	0	AAA	ATPase	domain
AAA_17	PF13207.1	gi|297620984|ref|YP_003709121.1|	-	0.013	16.2	0.0	0.023	15.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|297620984|ref|YP_003709121.1|	-	0.016	14.3	0.0	0.029	13.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
DUF2281	PF10047.4	gi|297620984|ref|YP_003709121.1|	-	0.026	14.7	0.1	0.06	13.6	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2281)
AAA_33	PF13671.1	gi|297620984|ref|YP_003709121.1|	-	0.047	13.5	0.1	0.19	11.5	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|297620984|ref|YP_003709121.1|	-	0.07	13.4	0.0	0.16	12.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
CbiA	PF01656.18	gi|297620984|ref|YP_003709121.1|	-	0.079	12.3	0.0	0.13	11.6	0.0	1.5	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
KTI12	PF08433.5	gi|297620984|ref|YP_003709121.1|	-	0.1	11.8	0.0	0.18	10.9	0.0	1.5	1	1	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_10	PF12846.2	gi|297620984|ref|YP_003709121.1|	-	0.11	11.8	0.4	0.39	10.1	0.1	2.1	2	1	0	2	2	2	0	AAA-like	domain
AAA_29	PF13555.1	gi|297620984|ref|YP_003709121.1|	-	0.13	11.8	0.1	0.23	10.9	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|297620984|ref|YP_003709121.1|	-	0.14	12.4	0.5	0.34	11.1	0.1	2.1	2	1	0	2	2	2	0	ABC	transporter
rve	PF00665.21	gi|297620985|ref|YP_003709122.1|	-	9.5e-22	77.3	0.0	1.9e-21	76.4	0.0	1.5	1	0	0	1	1	1	1	Integrase	core	domain
HTH_38	PF13936.1	gi|297620985|ref|YP_003709122.1|	-	3e-06	26.6	1.6	4.4e-06	26.1	0.2	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297620985|ref|YP_003709122.1|	-	7.4e-05	22.2	0.1	0.00022	20.7	0.1	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_7	PF02796.10	gi|297620985|ref|YP_003709122.1|	-	0.00036	20.3	1.6	0.0006	19.6	0.1	2.1	2	1	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
HTH_28	PF13518.1	gi|297620985|ref|YP_003709122.1|	-	0.00055	19.8	1.5	0.0033	17.3	0.1	2.4	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_17	PF12728.2	gi|297620985|ref|YP_003709122.1|	-	0.0027	17.9	0.5	0.015	15.5	0.0	2.4	2	0	0	2	2	2	1	Helix-turn-helix	domain
GerE	PF00196.14	gi|297620985|ref|YP_003709122.1|	-	0.0032	16.7	0.0	0.0057	15.9	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
rve_3	PF13683.1	gi|297620985|ref|YP_003709122.1|	-	0.005	16.3	0.0	0.014	14.9	0.0	1.8	1	0	0	1	1	1	1	Integrase	core	domain
HTH_29	PF13551.1	gi|297620985|ref|YP_003709122.1|	-	0.0075	16.4	0.2	0.02	15.0	0.1	1.9	1	1	1	2	2	2	1	Winged	helix-turn	helix
DUF2316	PF10078.4	gi|297620985|ref|YP_003709122.1|	-	0.0088	16.0	0.0	0.018	15.0	0.0	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2316)
HTH_40	PF14493.1	gi|297620985|ref|YP_003709122.1|	-	0.021	15.0	0.0	0.14	12.4	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
YscO	PF07321.7	gi|297620985|ref|YP_003709122.1|	-	0.046	13.5	0.0	0.098	12.4	0.0	1.5	1	0	0	1	1	1	0	Type	III	secretion	protein	YscO
Phage_NinH	PF06322.6	gi|297620985|ref|YP_003709122.1|	-	0.046	13.3	0.1	0.1	12.2	0.0	1.5	1	0	0	1	1	1	0	Phage	NinH	protein
HTH_3	PF01381.17	gi|297620985|ref|YP_003709122.1|	-	0.058	13.2	0.1	0.11	12.3	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix
HTH_30	PF13556.1	gi|297620985|ref|YP_003709122.1|	-	0.08	12.5	0.0	0.16	11.5	0.0	1.5	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
HTH_36	PF13730.1	gi|297620985|ref|YP_003709122.1|	-	0.17	12.0	1.0	1.3	9.2	0.0	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_33	PF13592.1	gi|297620986|ref|YP_003709123.1|	-	0.15	11.5	0.7	0.2	11.2	0.5	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
UCH	PF00443.24	gi|297620987|ref|YP_003709124.1|	-	1.8e-33	115.7	0.0	1.8e-33	115.7	0.0	2.4	2	1	0	2	2	2	1	Ubiquitin	carboxyl-terminal	hydrolase
RhoGEF	PF00621.15	gi|297620987|ref|YP_003709124.1|	-	1.3	8.8	14.2	0.74	9.6	1.3	3.4	2	1	1	3	3	3	0	RhoGEF	domain
Uds1	PF15456.1	gi|297620987|ref|YP_003709124.1|	-	7.9	6.4	11.9	0.8	9.7	3.7	2.6	3	0	0	3	3	3	0	Up-regulated	During	Septation
SMC_N	PF02463.14	gi|297620988|ref|YP_003709125.1|	-	1.7e-17	63.3	7.4	5.7e-17	61.6	5.1	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|297620988|ref|YP_003709125.1|	-	4.4e-10	40.2	28.8	2.1e-06	28.2	20.0	2.8	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|297620988|ref|YP_003709125.1|	-	0.00038	19.9	0.0	0.00093	18.6	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_21	PF13304.1	gi|297620988|ref|YP_003709125.1|	-	0.00048	20.1	1.8	0.51	10.2	0.0	2.5	2	1	0	2	2	2	2	AAA	domain
AAA_30	PF13604.1	gi|297620988|ref|YP_003709125.1|	-	0.045	13.3	0.7	0.29	10.6	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|297620988|ref|YP_003709125.1|	-	0.045	12.9	0.0	0.18	10.9	0.0	2.0	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|297620988|ref|YP_003709125.1|	-	0.17	12.0	5.4	0.22	11.6	0.0	3.6	3	1	2	5	5	5	0	AAA	domain
DUF4355	PF14265.1	gi|297620988|ref|YP_003709125.1|	-	0.49	10.3	23.1	0.02	14.8	6.8	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4355)
Lyase_8_N	PF08124.6	gi|297620988|ref|YP_003709125.1|	-	0.51	9.1	3.8	1.9	7.3	0.3	2.3	2	0	0	2	2	2	0	Polysaccharide	lyase	family	8,	N	terminal	alpha-helical	domain
ABC_tran	PF00005.22	gi|297620988|ref|YP_003709125.1|	-	0.56	10.5	0.0	0.56	10.5	0.0	3.1	2	1	0	2	2	2	0	ABC	transporter
AAA_16	PF13191.1	gi|297620988|ref|YP_003709125.1|	-	2.1	8.3	0.0	2.1	8.3	0.0	3.1	2	1	0	2	2	2	0	AAA	ATPase	domain
PEP-utilisers_N	PF05524.8	gi|297620988|ref|YP_003709125.1|	-	7.1	6.4	11.0	0.47	10.2	0.6	2.9	2	1	0	2	2	2	0	PEP-utilising	enzyme,	N-terminal
RNase_HII	PF01351.13	gi|297620990|ref|YP_003709127.1|	-	3.1e-29	102.0	0.3	3.9e-29	101.7	0.2	1.1	1	0	0	1	1	1	1	Ribonuclease	HII
DUF3378	PF11858.3	gi|297620990|ref|YP_003709127.1|	-	1.6e-09	37.6	0.0	3.1e-09	36.7	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3378)
Glyco_hydro_1	PF00232.13	gi|297620990|ref|YP_003709127.1|	-	0.0074	14.5	0.0	0.011	13.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	1
HTH_25	PF13413.1	gi|297620991|ref|YP_003709128.1|	-	2.2e-23	81.6	0.3	3.5e-23	80.9	0.2	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|297620991|ref|YP_003709128.1|	-	4.1e-08	33.1	0.2	6.8e-08	32.4	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|297620991|ref|YP_003709128.1|	-	6.4e-05	22.7	0.3	0.00011	21.9	0.2	1.5	1	1	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.1	gi|297620991|ref|YP_003709128.1|	-	0.0042	17.2	0.0	0.0078	16.3	0.0	1.5	1	1	0	1	1	1	1	Helix-turn-helix	domain
DUF896	PF05979.7	gi|297620991|ref|YP_003709128.1|	-	0.017	14.7	0.5	0.025	14.1	0.3	1.3	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF896)
DUF307	PF03733.8	gi|297620991|ref|YP_003709128.1|	-	0.12	12.8	3.0	0.16	12.3	2.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF307)
DUF368	PF04018.8	gi|297620992|ref|YP_003709129.1|	-	3.9e-73	245.8	4.6	3.9e-73	245.8	3.2	1.9	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF368)
PseudoU_synth_1	PF01416.15	gi|297620993|ref|YP_003709130.1|	-	3.1e-28	98.2	0.0	4.9e-17	62.2	0.0	2.2	2	0	0	2	2	2	2	tRNA	pseudouridine	synthase
MarC	PF01914.12	gi|297620994|ref|YP_003709131.1|	-	1.5e-43	148.2	16.6	1.7e-43	148.1	11.5	1.0	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
TerC	PF03741.11	gi|297620994|ref|YP_003709131.1|	-	0.017	14.6	10.3	0.58	9.5	7.1	2.1	1	1	0	1	1	1	0	Integral	membrane	protein	TerC	family
ECF-ribofla_trS	PF07155.7	gi|297620994|ref|YP_003709131.1|	-	0.02	14.6	8.0	0.058	13.1	0.6	2.3	2	0	0	2	2	2	0	ECF-type	riboflavin	transporter,	S	component
DUF4580	PF15162.1	gi|297620994|ref|YP_003709131.1|	-	0.034	13.4	0.3	0.069	12.4	0.2	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4580)
DUF1077	PF06417.7	gi|297620994|ref|YP_003709131.1|	-	1.7	8.0	5.8	0.19	11.0	0.7	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1077)
PalH	PF08733.5	gi|297620994|ref|YP_003709131.1|	-	6.9	5.3	8.1	0.87	8.3	0.4	2.0	2	0	0	2	2	2	0	PalH/RIM21
MarC	PF01914.12	gi|297620995|ref|YP_003709132.1|	-	3.5e-41	140.5	18.3	4e-41	140.3	12.7	1.0	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
TerC	PF03741.11	gi|297620995|ref|YP_003709132.1|	-	0.032	13.6	11.7	0.027	13.9	1.1	2.2	1	1	1	2	2	2	0	Integral	membrane	protein	TerC	family
Colicin_V	PF02674.11	gi|297620995|ref|YP_003709132.1|	-	0.56	10.0	13.6	5.1	6.9	9.4	2.2	1	1	0	1	1	1	0	Colicin	V	production	protein
DUF4131	PF13567.1	gi|297620995|ref|YP_003709132.1|	-	0.94	8.8	8.3	0.61	9.4	0.7	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
DUF1673	PF07895.6	gi|297620995|ref|YP_003709132.1|	-	2.1	7.8	7.3	7.3	6.0	5.0	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1673)
DUF1616	PF07760.6	gi|297620996|ref|YP_003709133.1|	-	0.00079	18.6	4.1	0.001	18.3	2.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1616)
Cytochrom_B_N	PF00033.14	gi|297620996|ref|YP_003709133.1|	-	0.0027	17.1	0.1	0.0029	17.0	0.1	1.2	1	0	0	1	1	1	1	Cytochrome	b(N-terminal)/b6/petB
BCLP	PF12304.3	gi|297620996|ref|YP_003709133.1|	-	0.078	12.3	1.4	0.16	11.3	0.1	1.7	1	1	1	2	2	2	0	Beta-casein	like	protein
PHO4	PF01384.15	gi|297620996|ref|YP_003709133.1|	-	0.1	11.2	2.2	0.39	9.3	1.5	1.8	1	1	0	1	1	1	0	Phosphate	transporter	family
ETRAMP	PF09716.5	gi|297620996|ref|YP_003709133.1|	-	0.1	12.5	0.3	0.19	11.6	0.2	1.5	1	0	0	1	1	1	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
DUF4231	PF14015.1	gi|297620996|ref|YP_003709133.1|	-	0.21	11.6	0.8	0.75	9.8	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4231)
DUF3671	PF12420.3	gi|297620996|ref|YP_003709133.1|	-	0.26	11.2	0.2	0.26	11.2	0.1	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function
DUF3270	PF11674.3	gi|297620996|ref|YP_003709133.1|	-	2.2	8.3	9.4	7.9	6.5	0.2	3.1	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3270)
SKG6	PF08693.5	gi|297620996|ref|YP_003709133.1|	-	6.5	6.1	7.3	0.52	9.6	1.6	1.7	2	0	0	2	2	2	0	Transmembrane	alpha-helix	domain
PhoD	PF09423.5	gi|297620997|ref|YP_003709134.1|	-	1.4e-10	40.3	0.0	3.7e-08	32.3	0.0	2.0	2	0	0	2	2	2	2	PhoD-like	phosphatase
Glucokinase	PF02685.11	gi|297620998|ref|YP_003709135.1|	-	2.7e-75	253.0	0.0	3.1e-75	252.8	0.0	1.0	1	0	0	1	1	1	1	Glucokinase
ATP_bind_4	PF01902.12	gi|297620999|ref|YP_003709136.1|	-	2e-42	145.0	0.0	2.5e-42	144.6	0.0	1.0	1	0	0	1	1	1	1	ATP-binding	region
Aminotran_1_2	PF00155.16	gi|297621000|ref|YP_003709137.1|	-	5.8e-41	140.6	0.0	1.8e-40	138.9	0.0	1.7	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Alliinase_C	PF04864.8	gi|297621000|ref|YP_003709137.1|	-	1.8e-06	26.8	0.0	0.00018	20.2	0.0	2.2	2	0	0	2	2	2	2	Allinase
DHDPS	PF00701.17	gi|297621001|ref|YP_003709138.1|	-	4.8e-99	330.6	0.0	5.3e-99	330.4	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
DapB_C	PF05173.9	gi|297621002|ref|YP_003709139.1|	-	3.6e-36	123.8	0.0	9.1e-36	122.5	0.0	1.7	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	C-terminus
DapB_N	PF01113.15	gi|297621002|ref|YP_003709139.1|	-	9.6e-19	67.5	0.5	4.3e-18	65.4	0.3	2.0	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Gp_dh_N	PF00044.19	gi|297621002|ref|YP_003709139.1|	-	0.0025	17.7	0.2	0.0071	16.3	0.1	1.8	1	1	1	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|297621002|ref|YP_003709139.1|	-	0.0028	18.1	0.0	0.0047	17.4	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
F420_oxidored	PF03807.12	gi|297621002|ref|YP_003709139.1|	-	0.003	17.9	0.1	0.0054	17.1	0.1	1.5	1	1	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.10	gi|297621002|ref|YP_003709139.1|	-	0.0076	16.1	0.1	0.036	13.8	0.1	2.0	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.13	gi|297621002|ref|YP_003709139.1|	-	0.041	13.5	0.1	0.066	12.8	0.1	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_10	PF13460.1	gi|297621002|ref|YP_003709139.1|	-	0.085	12.8	0.1	0.16	12.0	0.0	1.7	1	1	0	1	1	1	0	NADH(P)-binding
Transketolase_C	PF02780.15	gi|297621002|ref|YP_003709139.1|	-	0.1	12.5	0.0	0.21	11.5	0.0	1.5	1	0	0	1	1	1	0	Transketolase,	C-terminal	domain
HTH_19	PF12844.2	gi|297621003|ref|YP_003709140.1|	-	0.093	12.7	0.1	0.096	12.7	0.1	1.0	1	0	0	1	1	1	0	Helix-turn-helix	domain
Beta-lactamase	PF00144.19	gi|297621004|ref|YP_003709141.1|	-	1.1e-50	172.4	0.1	1.5e-50	172.1	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase
DUF3471	PF11954.3	gi|297621004|ref|YP_003709141.1|	-	4.6e-12	45.6	0.1	1.3e-11	44.2	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3471)
DUF423	PF04241.10	gi|297621005|ref|YP_003709142.1|	-	8.6e-31	105.7	6.9	1.3e-30	105.0	4.8	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF423)
MOZ_SAS	PF01853.13	gi|297621005|ref|YP_003709142.1|	-	0.1	11.8	0.2	0.13	11.4	0.1	1.1	1	0	0	1	1	1	0	MOZ/SAS	family
LAT	PF15234.1	gi|297621006|ref|YP_003709143.1|	-	0.025	14.0	0.0	0.038	13.4	0.0	1.2	1	0	0	1	1	1	0	Linker	for	activation	of	T-cells
PLDc_2	PF13091.1	gi|297621007|ref|YP_003709144.1|	-	2e-44	150.3	2.8	5.5e-25	87.5	0.0	2.1	2	0	0	2	2	2	2	PLD-like	domain
DUF1669	PF07894.7	gi|297621007|ref|YP_003709144.1|	-	1.4e-11	44.1	0.1	0.003	16.7	0.0	4.1	3	1	1	4	4	4	4	Protein	of	unknown	function	(DUF1669)
Regulator_TrmB	PF11495.3	gi|297621007|ref|YP_003709144.1|	-	9.4e-09	34.5	0.0	6.9e-05	21.9	0.0	2.1	2	0	0	2	2	2	2	Archaeal	transcriptional	regulator	TrmB
PP_kinase_C	PF13090.1	gi|297621007|ref|YP_003709144.1|	-	1.7e-08	33.4	0.5	2.4e-07	29.6	0.0	2.0	2	0	0	2	2	2	1	Polyphosphate	kinase	C-terminal	domain
PLDc	PF00614.17	gi|297621007|ref|YP_003709144.1|	-	2.5e-08	33.4	0.2	0.00046	19.8	0.0	2.4	2	0	0	2	2	2	2	Phospholipase	D	Active	site	motif
7TM_GPCR_Srsx	PF10320.4	gi|297621007|ref|YP_003709144.1|	-	0.056	12.5	0.1	0.69	9.0	0.0	2.2	2	0	0	2	2	2	0	Serpentine	type	7TM	GPCR	chemoreceptor	Srsx
HHH_4	PF14490.1	gi|297621008|ref|YP_003709145.1|	-	8.4e-39	131.2	0.0	2.1e-33	113.9	0.0	2.8	2	0	0	2	2	2	2	Helix-hairpin-helix	containing	domain
AAA_30	PF13604.1	gi|297621008|ref|YP_003709145.1|	-	2.3e-35	121.9	0.0	4.6e-35	120.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
UvrD_C_2	PF13538.1	gi|297621008|ref|YP_003709145.1|	-	4.1e-24	84.7	0.0	1.1e-23	83.3	0.0	1.8	1	0	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
AAA_19	PF13245.1	gi|297621008|ref|YP_003709145.1|	-	7.9e-16	57.5	1.9	1.1e-15	57.1	0.5	1.9	2	0	0	2	2	2	1	Part	of	AAA	domain
HHH_5	PF14520.1	gi|297621008|ref|YP_003709145.1|	-	2e-10	40.6	0.2	1.3e-06	28.4	0.0	3.1	3	0	0	3	3	2	2	Helix-hairpin-helix	domain
AAA_11	PF13086.1	gi|297621008|ref|YP_003709145.1|	-	3.2e-10	39.9	1.0	0.00072	19.1	0.1	2.5	1	1	0	2	2	2	2	AAA	domain
Helicase_RecD	PF05127.9	gi|297621008|ref|YP_003709145.1|	-	2.6e-07	30.4	0.9	3.4e-06	26.8	0.6	2.4	1	1	0	1	1	1	1	Helicase
Viral_helicase1	PF01443.13	gi|297621008|ref|YP_003709145.1|	-	7.7e-06	25.5	0.0	0.0018	17.8	0.0	2.4	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
PhoH	PF02562.11	gi|297621008|ref|YP_003709145.1|	-	6.6e-05	22.2	1.0	0.16	11.2	0.2	2.4	2	0	0	2	2	2	2	PhoH-like	protein
HHH	PF00633.18	gi|297621008|ref|YP_003709145.1|	-	9.7e-05	21.8	1.9	2.4	8.0	0.0	4.2	4	0	0	4	4	3	1	Helix-hairpin-helix	motif
T2SE	PF00437.15	gi|297621008|ref|YP_003709145.1|	-	0.00025	20.0	0.1	0.0007	18.5	0.1	1.7	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
PIF1	PF05970.9	gi|297621008|ref|YP_003709145.1|	-	0.001	18.1	0.1	0.0027	16.7	0.0	1.8	1	0	0	1	1	1	1	PIF1-like	helicase
AAA_18	PF13238.1	gi|297621008|ref|YP_003709145.1|	-	0.0017	18.6	0.7	0.029	14.6	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
MMR_HSR1	PF01926.18	gi|297621008|ref|YP_003709145.1|	-	0.0024	17.8	0.1	0.017	15.0	0.0	2.3	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
AAA_29	PF13555.1	gi|297621008|ref|YP_003709145.1|	-	0.0026	17.2	0.4	0.0057	16.1	0.3	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF2075	PF09848.4	gi|297621008|ref|YP_003709145.1|	-	0.0071	15.3	0.0	0.014	14.4	0.0	1.5	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
ABC_tran	PF00005.22	gi|297621008|ref|YP_003709145.1|	-	0.012	15.9	0.1	0.034	14.4	0.0	1.8	1	0	0	1	1	1	0	ABC	transporter
HHH_2	PF12826.2	gi|297621008|ref|YP_003709145.1|	-	0.013	15.3	0.0	1.7	8.5	0.0	3.2	1	1	1	2	2	2	0	Helix-hairpin-helix	motif
DUF258	PF03193.11	gi|297621008|ref|YP_003709145.1|	-	0.015	14.5	0.2	0.027	13.6	0.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_28	PF13521.1	gi|297621008|ref|YP_003709145.1|	-	0.02	14.8	0.0	0.039	13.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|297621008|ref|YP_003709145.1|	-	0.022	15.6	0.3	0.098	13.4	0.0	2.3	2	0	0	2	2	1	0	AAA	domain
HHH_3	PF12836.2	gi|297621008|ref|YP_003709145.1|	-	0.034	14.1	0.1	11	6.0	0.0	3.5	3	0	0	3	3	3	0	Helix-hairpin-helix	motif
Ribosomal_S13	PF00416.17	gi|297621008|ref|YP_003709145.1|	-	0.046	14.1	0.1	1	9.8	0.0	2.9	3	0	0	3	3	2	0	Ribosomal	protein	S13/S18
HHH_8	PF14716.1	gi|297621008|ref|YP_003709145.1|	-	0.055	13.6	0.4	2.4	8.4	0.1	3.2	3	0	0	3	3	3	0	Helix-hairpin-helix	domain
IstB_IS21	PF01695.12	gi|297621008|ref|YP_003709145.1|	-	0.058	12.7	0.2	1.4	8.3	0.2	2.4	1	1	0	1	1	1	0	IstB-like	ATP	binding	protein
NTPase_1	PF03266.10	gi|297621008|ref|YP_003709145.1|	-	0.081	12.6	2.4	0.55	9.9	0.4	2.8	3	0	0	3	3	2	0	NTPase
AAA_16	PF13191.1	gi|297621008|ref|YP_003709145.1|	-	0.088	12.7	0.0	0.24	11.3	0.0	1.8	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA	PF00004.24	gi|297621008|ref|YP_003709145.1|	-	0.096	12.8	0.2	0.43	10.7	0.1	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|297621008|ref|YP_003709145.1|	-	0.18	11.9	1.5	2.8	8.1	1.1	2.8	1	1	0	1	1	1	0	AAA	domain
IMS_HHH	PF11798.3	gi|297621008|ref|YP_003709145.1|	-	0.41	10.7	2.5	6.6	6.9	0.1	3.5	4	0	0	4	4	2	0	IMS	family	HHH	motif
UvrD-helicase	PF00580.16	gi|297621008|ref|YP_003709145.1|	-	1.8	7.7	7.6	2.2	7.5	1.0	2.6	2	1	0	3	3	3	0	UvrD/REP	helicase	N-terminal	domain
AAA_23	PF13476.1	gi|297621008|ref|YP_003709145.1|	-	3.2	8.0	9.7	25	5.0	4.9	3.0	1	1	1	2	2	2	0	AAA	domain
HEAT_2	PF13646.1	gi|297621009|ref|YP_003709146.1|	-	2.5e-24	85.3	4.9	1.6e-06	28.2	0.3	4.1	2	2	3	5	5	5	4	HEAT	repeats
HEAT_PBS	PF03130.11	gi|297621009|ref|YP_003709146.1|	-	4e-05	23.6	3.3	0.02	15.2	0.0	5.0	5	2	1	6	6	6	1	PBS	lyase	HEAT-like	repeat
ERAP1_C	PF11838.3	gi|297621009|ref|YP_003709146.1|	-	0.019	14.2	2.4	1.1	8.4	0.1	2.6	1	1	2	3	3	3	0	ERAP1-like	C-terminal	domain
zf-CHC2	PF01807.15	gi|297621010|ref|YP_003709147.1|	-	1.1e-34	117.8	0.1	2.7e-34	116.6	0.0	1.7	1	0	0	1	1	1	1	CHC2	zinc	finger
Toprim_N	PF08275.6	gi|297621010|ref|YP_003709147.1|	-	4.6e-32	110.6	0.0	9.3e-32	109.6	0.0	1.5	1	0	0	1	1	1	1	DNA	primase	catalytic	core,	N-terminal	domain
Toprim_4	PF13662.1	gi|297621010|ref|YP_003709147.1|	-	8.5e-12	44.9	0.5	1.8e-11	43.8	0.3	1.6	1	0	0	1	1	1	1	Toprim	domain
Toprim_3	PF13362.1	gi|297621010|ref|YP_003709147.1|	-	4.8e-09	36.3	0.0	8.1e-09	35.6	0.0	1.4	1	0	0	1	1	1	1	Toprim	domain
Toprim_2	PF13155.1	gi|297621010|ref|YP_003709147.1|	-	4.9e-08	33.1	0.0	7.7e-07	29.3	0.0	2.5	2	0	0	2	2	2	1	Toprim-like
DnaB_bind	PF10410.4	gi|297621010|ref|YP_003709147.1|	-	1.1e-07	31.7	0.0	2.6e-07	30.5	0.0	1.7	1	0	0	1	1	1	1	DnaB-helicase	binding	domain	of	primase
Toprim	PF01751.17	gi|297621010|ref|YP_003709147.1|	-	0.0014	18.5	0.1	0.0039	17.1	0.1	1.8	1	0	0	1	1	1	1	Toprim	domain
DUF354	PF04007.7	gi|297621010|ref|YP_003709147.1|	-	0.11	11.3	0.0	0.2	10.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF354)
Viral_DNA_bi	PF02236.12	gi|297621010|ref|YP_003709147.1|	-	0.13	12.4	0.0	0.58	10.3	0.0	2.1	2	0	0	2	2	2	0	Viral	DNA-binding	protein,	all	alpha	domain
DUF393	PF04134.7	gi|297621011|ref|YP_003709148.1|	-	4.5e-20	72.8	0.0	5.3e-20	72.6	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF393
Baculo_PEP_C	PF04513.7	gi|297621012|ref|YP_003709149.1|	-	3.6e-05	23.6	3.2	0.035	13.9	0.0	3.4	3	1	1	4	4	4	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF869	PF05911.6	gi|297621012|ref|YP_003709149.1|	-	0.0004	18.7	4.8	0.0005	18.4	3.3	1.1	1	0	0	1	1	1	1	Plant	protein	of	unknown	function	(DUF869)
Tropomyosin_1	PF12718.2	gi|297621012|ref|YP_003709149.1|	-	0.012	15.4	2.0	0.012	15.4	1.4	3.0	1	1	2	3	3	3	0	Tropomyosin	like
Surfac_D-trimer	PF09006.6	gi|297621012|ref|YP_003709149.1|	-	0.015	15.0	0.4	5.5	6.8	0.1	3.7	3	0	0	3	3	3	0	Lung	surfactant	protein	D	coiled-coil	trimerisation
Flagellin_N	PF00669.15	gi|297621012|ref|YP_003709149.1|	-	0.042	13.6	4.3	0.92	9.2	0.1	2.5	2	0	0	2	2	2	0	Bacterial	flagellin	N-terminal	helical	region
INT_SG_DDX_CT_C	PF15300.1	gi|297621012|ref|YP_003709149.1|	-	0.061	12.7	0.5	10	5.6	0.0	3.2	2	0	0	2	2	2	0	INTS6/SAGE1/DDX26B/CT45	C-terminus
BHD_1	PF10403.4	gi|297621012|ref|YP_003709149.1|	-	0.062	12.8	0.6	3.2	7.3	0.0	3.1	2	1	0	2	2	2	0	Rad4	beta-hairpin	domain	1
Oxidored_q1_C	PF01010.14	gi|297621012|ref|YP_003709149.1|	-	0.094	12.2	2.9	0.21	11.0	2.0	1.6	1	0	0	1	1	1	0	NADH-Ubiquinone	oxidoreductase	(complex	I)	subunit	C-terminus
HrcA	PF01628.16	gi|297621012|ref|YP_003709149.1|	-	0.11	12.1	1.9	0.18	11.3	1.3	1.5	1	0	0	1	1	1	0	HrcA	protein	C	terminal	domain
FlaC_arch	PF05377.6	gi|297621012|ref|YP_003709149.1|	-	0.12	12.3	7.5	0.56	10.1	0.1	3.4	5	0	0	5	5	4	0	Flagella	accessory	protein	C	(FlaC)
Uds1	PF15456.1	gi|297621012|ref|YP_003709149.1|	-	0.13	12.2	6.7	0.057	13.4	2.0	2.2	2	0	0	2	2	2	0	Up-regulated	During	Septation
Syntaxin-6_N	PF09177.6	gi|297621012|ref|YP_003709149.1|	-	0.26	11.6	7.8	8.4	6.8	1.8	3.3	2	1	2	4	4	4	0	Syntaxin	6,	N-terminal
FliJ	PF02050.11	gi|297621012|ref|YP_003709149.1|	-	0.28	11.2	15.3	0.79	9.7	5.9	3.4	2	1	2	4	4	3	0	Flagellar	FliJ	protein
ApoLp-III	PF07464.6	gi|297621012|ref|YP_003709149.1|	-	0.31	11.0	17.0	1	9.3	8.2	3.0	1	1	2	3	3	3	0	Apolipophorin-III	precursor	(apoLp-III)
IncA	PF04156.9	gi|297621012|ref|YP_003709149.1|	-	0.39	10.2	7.3	3.9	7.0	5.1	2.4	1	1	0	1	1	1	0	IncA	protein
THOC7	PF05615.8	gi|297621012|ref|YP_003709149.1|	-	1.4	9.1	15.7	6.2	7.0	4.8	3.1	1	1	1	2	2	2	0	Tho	complex	subunit	7
YlqD	PF11068.3	gi|297621012|ref|YP_003709149.1|	-	2.3	8.2	16.9	3.1	7.8	5.0	2.9	2	1	1	3	3	3	0	YlqD	protein
Atg14	PF10186.4	gi|297621012|ref|YP_003709149.1|	-	4	6.2	19.2	0.5	9.2	9.9	1.8	2	1	0	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
5_3_exonuc	PF01367.15	gi|297621012|ref|YP_003709149.1|	-	6.3	7.1	7.9	5.9	7.1	0.7	3.2	2	1	1	3	3	3	0	5'-3'	exonuclease,	C-terminal	SAM	fold
CENP-H	PF05837.7	gi|297621012|ref|YP_003709149.1|	-	6.6	6.9	11.5	0.65	10.2	0.3	2.7	2	0	0	2	2	2	0	Centromere	protein	H	(CENP-H)
Occludin_ELL	PF07303.8	gi|297621012|ref|YP_003709149.1|	-	8.4	7.1	13.1	2	9.1	0.3	3.7	2	1	2	4	4	4	0	Occludin	homology	domain
DUF4407	PF14362.1	gi|297621012|ref|YP_003709149.1|	-	9.5	5.0	10.9	19	4.0	6.1	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
OMP_b-brl	PF13505.1	gi|297621014|ref|YP_003709151.1|	-	0.00013	22.0	0.2	0.00017	21.5	0.2	1.2	1	0	0	1	1	1	1	Outer	membrane	protein	beta-barrel	domain
ATP-grasp_4	PF13535.1	gi|297621016|ref|YP_003709153.1|	-	2.2e-18	66.6	0.0	3.5e-18	65.9	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|297621016|ref|YP_003709153.1|	-	6.7e-18	64.5	0.0	1.2e-16	60.3	0.0	2.1	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|297621016|ref|YP_003709153.1|	-	5.4e-09	36.1	0.0	1.5e-08	34.6	0.0	1.7	1	1	0	1	1	1	1	ATP-grasp	domain
TTL	PF03133.10	gi|297621016|ref|YP_003709153.1|	-	0.0087	15.0	0.0	0.013	14.4	0.0	1.2	1	0	0	1	1	1	1	Tubulin-tyrosine	ligase	family
RimK	PF08443.6	gi|297621016|ref|YP_003709153.1|	-	0.06	12.8	0.0	0.11	11.9	0.0	1.4	1	0	0	1	1	1	0	RimK-like	ATP-grasp	domain
CPSase_L_chain	PF00289.17	gi|297621016|ref|YP_003709153.1|	-	0.16	12.0	0.0	0.32	11.1	0.0	1.5	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
RmlD_sub_bind	PF04321.12	gi|297621016|ref|YP_003709153.1|	-	0.19	10.5	0.0	0.81	8.5	0.0	1.8	2	0	0	2	2	2	0	RmlD	substrate	binding	domain
Methyltrans_RNA	PF04452.9	gi|297621017|ref|YP_003709154.1|	-	1.2e-50	171.7	0.0	1.4e-50	171.5	0.0	1.1	1	0	0	1	1	1	1	RNA	methyltransferase
YbbR	PF07949.7	gi|297621018|ref|YP_003709155.1|	-	4.7e-05	23.4	0.1	0.38	10.9	0.3	2.7	2	0	0	2	2	2	2	YbbR-like	protein
NADH_dh_m_C1	PF15088.1	gi|297621018|ref|YP_003709155.1|	-	0.085	12.3	0.1	0.19	11.2	0.1	1.5	1	0	0	1	1	1	0	NADH	dehydrogenase	[ubiquinone]	1	subunit	C1,	mitochondrial
DisA_N	PF02457.11	gi|297621019|ref|YP_003709156.1|	-	5.5e-41	138.5	0.8	8.1e-41	137.9	0.5	1.3	1	0	0	1	1	1	1	DisA	bacterial	checkpoint	controller	nucleotide-binding
Tri3	PF07428.6	gi|297621019|ref|YP_003709156.1|	-	0.091	11.4	0.0	0.12	11.0	0.0	1.1	1	0	0	1	1	1	0	15-O-acetyltransferase	Tri3
Pterin_bind	PF00809.17	gi|297621020|ref|YP_003709157.1|	-	6.8e-76	254.2	0.0	8.6e-76	253.9	0.0	1.1	1	0	0	1	1	1	1	Pterin	binding	enzyme
Bac_Ubq_Cox	PF01654.12	gi|297621021|ref|YP_003709158.1|	-	4.2e-164	546.1	28.8	4.8e-164	545.9	19.9	1.0	1	0	0	1	1	1	1	Bacterial	Cytochrome	Ubiquinol	Oxidase
Cyto_ox_2	PF02322.10	gi|297621022|ref|YP_003709159.1|	-	1.4e-104	349.7	24.6	1.6e-104	349.6	17.1	1.0	1	0	0	1	1	1	1	Cytochrome	oxidase	subunit	II
rve	PF00665.21	gi|297621023|ref|YP_003709160.1|	-	7.3e-16	58.3	0.0	4.6e-15	55.7	0.0	2.1	2	0	0	2	2	2	1	Integrase	core	domain
HTH_38	PF13936.1	gi|297621023|ref|YP_003709160.1|	-	2.1e-12	46.4	0.4	5.4e-12	45.0	0.3	1.8	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297621023|ref|YP_003709160.1|	-	9e-06	25.1	1.3	0.0002	20.8	0.0	3.3	3	1	0	3	3	3	1	Homeodomain-like	domain
HTH_29	PF13551.1	gi|297621023|ref|YP_003709160.1|	-	0.00014	21.9	5.3	0.18	11.9	0.1	3.1	2	1	1	3	3	3	2	Winged	helix-turn	helix
HTH_32	PF13565.1	gi|297621023|ref|YP_003709160.1|	-	0.018	15.8	3.4	0.019	15.7	0.0	2.8	2	1	2	4	4	4	0	Homeodomain-like	domain
HTH_28	PF13518.1	gi|297621023|ref|YP_003709160.1|	-	0.032	14.2	4.6	0.74	9.8	0.0	3.4	3	0	0	3	3	3	0	Helix-turn-helix	domain
Katanin_con80	PF13925.1	gi|297621024|ref|YP_003709161.1|	-	0.0023	17.6	0.1	0.0023	17.6	0.0	3.9	5	0	0	5	5	5	1	con80	domain	of	Katanin
GBP_C	PF02841.9	gi|297621024|ref|YP_003709161.1|	-	0.018	14.2	7.9	0.041	13.0	5.5	1.5	1	0	0	1	1	1	0	Guanylate-binding	protein,	C-terminal	domain
eIF3_N	PF09440.5	gi|297621024|ref|YP_003709161.1|	-	0.073	13.2	0.1	0.073	13.2	0.0	3.5	3	1	1	4	4	4	0	eIF3	subunit	6	N	terminal	domain
Erp_C	PF06780.6	gi|297621024|ref|YP_003709161.1|	-	1.6	8.5	12.4	0.56	10.0	5.9	2.3	2	0	0	2	2	2	0	Erp	protein	C-terminus
BEX	PF04538.7	gi|297621024|ref|YP_003709161.1|	-	6.8	6.9	8.6	7	6.9	2.3	2.7	1	1	1	2	2	2	0	Brain	expressed	X-linked	like	family
BPL_LplA_LipB	PF03099.14	gi|297621025|ref|YP_003709162.1|	-	5e-16	58.8	0.0	6.7e-16	58.4	0.0	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Radical_SAM	PF04055.16	gi|297621026|ref|YP_003709163.1|	-	2e-10	41.1	0.0	3.2e-10	40.4	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|297621026|ref|YP_003709163.1|	-	0.0058	16.6	0.0	0.011	15.7	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|297621026|ref|YP_003709163.1|	-	0.084	12.9	0.0	0.14	12.2	0.0	1.3	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Mur_ligase_M	PF08245.7	gi|297621027|ref|YP_003709164.1|	-	2.5e-12	47.2	0.0	5.6e-12	46.1	0.0	1.6	1	0	0	1	1	1	1	Mur	ligase	middle	domain
PrpR_N	PF06506.6	gi|297621027|ref|YP_003709164.1|	-	0.075	12.4	0.0	0.25	10.7	0.0	1.8	2	0	0	2	2	2	0	Propionate	catabolism	activator
PHP	PF02811.14	gi|297621028|ref|YP_003709165.1|	-	2.4e-17	63.3	0.0	4.1e-17	62.5	0.0	1.4	1	1	0	1	1	1	1	PHP	domain
Amidohydro_2	PF04909.9	gi|297621028|ref|YP_003709165.1|	-	0.12	11.8	0.0	0.15	11.5	0.0	1.2	1	0	0	1	1	1	0	Amidohydrolase
MurB_C	PF02873.11	gi|297621029|ref|YP_003709166.1|	-	2.2e-32	110.9	0.0	4.3e-32	109.9	0.0	1.5	1	0	0	1	1	1	1	UDP-N-acetylenolpyruvoylglucosamine	reductase,	C-terminal	domain
FAD_binding_4	PF01565.18	gi|297621029|ref|YP_003709166.1|	-	2.5e-23	82.0	0.0	4.3e-23	81.3	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Ofd1_CTDD	PF10637.4	gi|297621029|ref|YP_003709166.1|	-	0.11	11.6	0.0	0.16	11.0	0.0	1.2	1	0	0	1	1	1	0	Oxoglutarate	and	iron-dependent	oxygenase	degradation	C-term
NusB	PF01029.13	gi|297621030|ref|YP_003709167.1|	-	1e-28	99.9	0.1	1.2e-28	99.7	0.0	1.0	1	0	0	1	1	1	1	NusB	family
SPATA19	PF15212.1	gi|297621030|ref|YP_003709167.1|	-	0.075	13.0	0.1	0.11	12.5	0.0	1.2	1	0	0	1	1	1	0	Spermatogenesis-associated	protein	19,	mitochondrial
RNase_T	PF00929.19	gi|297621033|ref|YP_003709170.1|	-	1.2e-07	32.1	0.1	2.7e-07	31.0	0.0	1.6	1	1	0	1	1	1	1	Exonuclease
RNase_H_2	PF13482.1	gi|297621033|ref|YP_003709170.1|	-	0.066	13.0	1.3	1	9.1	0.1	2.2	1	1	0	2	2	2	0	RNase_H	superfamily
PaO	PF08417.7	gi|297621033|ref|YP_003709170.1|	-	0.084	12.8	0.1	1.1	9.1	0.0	2.1	2	0	0	2	2	2	0	Pheophorbide	a	oxygenase
rRNA_methylase	PF06962.7	gi|297621034|ref|YP_003709171.1|	-	1.4e-41	141.4	0.0	1.9e-41	141.0	0.0	1.2	1	0	0	1	1	1	1	Putative	rRNA	methylase
Methyltransf_26	PF13659.1	gi|297621034|ref|YP_003709171.1|	-	7.1e-09	35.7	0.0	1e-08	35.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297621034|ref|YP_003709171.1|	-	7.9e-08	32.0	0.1	1.2e-07	31.4	0.1	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297621034|ref|YP_003709171.1|	-	0.00089	19.8	0.0	0.0013	19.2	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|297621034|ref|YP_003709171.1|	-	0.0029	17.2	0.1	0.0068	16.1	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_5	PF01795.14	gi|297621034|ref|YP_003709171.1|	-	0.0031	16.8	0.1	0.016	14.4	0.0	1.8	2	0	0	2	2	2	1	MraW	methylase	family
Ubie_methyltran	PF01209.13	gi|297621034|ref|YP_003709171.1|	-	0.0045	16.1	0.0	0.0053	15.8	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
MTS	PF05175.9	gi|297621034|ref|YP_003709171.1|	-	0.007	15.7	0.1	0.012	14.9	0.1	1.4	1	1	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.8	gi|297621034|ref|YP_003709171.1|	-	0.02	14.0	0.0	0.031	13.3	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
SAM_MT	PF04445.8	gi|297621034|ref|YP_003709171.1|	-	0.035	13.2	0.0	0.046	12.8	0.0	1.2	1	0	0	1	1	1	0	Putative	SAM-dependent	methyltransferase
TehB	PF03848.9	gi|297621034|ref|YP_003709171.1|	-	0.087	11.9	0.1	0.19	10.8	0.0	1.5	2	0	0	2	2	2	0	Tellurite	resistance	protein	TehB
Methyltransf_11	PF08241.7	gi|297621034|ref|YP_003709171.1|	-	0.088	13.3	0.0	0.17	12.4	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Met_10	PF02475.11	gi|297621034|ref|YP_003709171.1|	-	0.093	12.3	0.0	0.13	11.8	0.0	1.4	1	1	0	1	1	1	0	Met-10+	like-protein
Xan_ur_permease	PF00860.15	gi|297621035|ref|YP_003709172.1|	-	3e-44	151.0	34.7	3.6e-44	150.8	24.1	1.1	1	0	0	1	1	1	1	Permease	family
DUF1049	PF06305.6	gi|297621036|ref|YP_003709173.1|	-	0.66	9.4	4.2	2.1	7.8	1.7	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1049)
DUF2207	PF09972.4	gi|297621036|ref|YP_003709173.1|	-	0.67	8.4	5.5	0.8	8.2	3.8	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Asp23	PF03780.8	gi|297621037|ref|YP_003709174.1|	-	4.2e-17	62.3	0.6	5.8e-17	61.9	0.4	1.1	1	0	0	1	1	1	1	Asp23	family
NARG2_C	PF10505.4	gi|297621037|ref|YP_003709174.1|	-	0.0078	15.4	0.0	0.01	15.0	0.0	1.1	1	0	0	1	1	1	1	NMDA	receptor-regulated	gene	protein	2	C-terminus
DUF4339	PF14237.1	gi|297621038|ref|YP_003709175.1|	-	3.6e-14	52.0	0.5	5.2e-14	51.5	0.3	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4339)
DUF4131	PF13567.1	gi|297621038|ref|YP_003709175.1|	-	0.028	13.8	0.0	0.034	13.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
MFS_1	PF07690.11	gi|297621038|ref|YP_003709175.1|	-	0.031	13.0	0.0	0.031	12.9	0.0	1.1	1	0	0	1	1	1	0	Major	Facilitator	Superfamily
DUF2207	PF09972.4	gi|297621038|ref|YP_003709175.1|	-	0.045	12.3	0.2	0.056	12.0	0.1	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
YesK	PF14150.1	gi|297621038|ref|YP_003709175.1|	-	0.049	13.7	0.6	0.076	13.1	0.4	1.2	1	0	0	1	1	1	0	YesK-like	protein
DUF2788	PF10981.3	gi|297621038|ref|YP_003709175.1|	-	0.077	12.8	1.8	0.12	12.1	1.3	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2788)
YjgP_YjgQ	PF03739.9	gi|297621038|ref|YP_003709175.1|	-	0.82	8.3	2.8	1.1	7.9	1.2	1.6	1	1	1	2	2	2	0	Predicted	permease	YjgP/YjgQ	family
Ribosomal_S14	PF00253.16	gi|297621039|ref|YP_003709176.1|	-	3.1e-22	77.7	1.2	3.1e-22	77.7	0.8	1.8	2	0	0	2	2	2	1	Ribosomal	protein	S14p/S29e
DUF3896	PF13035.1	gi|297621039|ref|YP_003709176.1|	-	0.013	15.5	2.4	0.014	15.3	0.9	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3896)
Ribosomal_L36	PF00444.13	gi|297621040|ref|YP_003709177.1|	-	4.2e-15	55.4	3.6	5.3e-15	55.1	2.5	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L36
Ribosomal_L34	PF00468.12	gi|297621041|ref|YP_003709178.1|	-	8e-20	70.2	14.3	8.7e-20	70.1	9.9	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L34
Ribonuclease_P	PF00825.13	gi|297621042|ref|YP_003709179.1|	-	1.2e-25	89.5	5.7	1.4e-25	89.3	4.0	1.0	1	0	0	1	1	1	1	Ribonuclease	P
DUF910	PF06014.6	gi|297621042|ref|YP_003709179.1|	-	0.095	12.6	0.1	0.76	9.7	0.0	2.1	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF910)
Thioredoxin_7	PF13899.1	gi|297621043|ref|YP_003709180.1|	-	1.1e-18	67.0	0.0	2.9e-18	65.6	0.0	1.8	2	0	0	2	2	2	1	Thioredoxin-like
Thioredox_DsbH	PF03190.10	gi|297621043|ref|YP_003709180.1|	-	3.8e-13	49.4	0.0	6.5e-13	48.7	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin_2	PF13098.1	gi|297621043|ref|YP_003709180.1|	-	1.3e-12	47.8	0.4	5.2e-12	45.9	0.0	2.1	2	0	0	2	2	2	1	Thioredoxin-like	domain
Thioredoxin	PF00085.15	gi|297621043|ref|YP_003709180.1|	-	1.7e-07	30.8	0.2	1.6e-06	27.7	0.2	2.4	1	1	0	1	1	1	1	Thioredoxin
Thioredoxin_8	PF13905.1	gi|297621043|ref|YP_003709180.1|	-	2.1e-05	24.5	3.2	0.00042	20.3	0.2	3.3	3	1	0	3	3	3	1	Thioredoxin-like
Redoxin	PF08534.5	gi|297621043|ref|YP_003709180.1|	-	0.00062	19.3	0.2	0.011	15.2	0.0	2.6	3	0	0	3	3	3	1	Redoxin
AhpC-TSA	PF00578.16	gi|297621043|ref|YP_003709180.1|	-	0.0066	16.1	0.1	0.038	13.6	0.0	2.3	3	0	0	3	3	3	1	AhpC/TSA	family
HyaE	PF07449.6	gi|297621043|ref|YP_003709180.1|	-	0.046	13.6	0.0	0.65	9.9	0.0	2.4	2	0	0	2	2	2	0	Hydrogenase-1	expression	protein	HyaE
DUF367	PF04034.8	gi|297621044|ref|YP_003709181.1|	-	4.9e-05	22.9	0.0	0.00016	21.2	0.0	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF367)
DTW	PF03942.10	gi|297621044|ref|YP_003709181.1|	-	0.019	14.1	0.0	0.027	13.7	0.0	1.4	1	1	0	1	1	1	0	DTW	domain
Na_Ala_symp	PF01235.12	gi|297621045|ref|YP_003709182.1|	-	9.2e-77	258.3	21.0	1.3e-76	257.9	14.5	1.0	1	0	0	1	1	1	1	Sodium:alanine	symporter	family
PfkB	PF00294.19	gi|297621046|ref|YP_003709183.1|	-	3.9e-43	147.6	0.0	4.9e-43	147.3	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
CDP-OH_P_transf	PF01066.16	gi|297621047|ref|YP_003709184.1|	-	3.4e-16	59.3	5.3	3.4e-16	59.3	3.7	1.9	1	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
MMPL	PF03176.10	gi|297621047|ref|YP_003709184.1|	-	0.43	9.2	4.5	0.72	8.5	3.1	1.2	1	0	0	1	1	1	0	MMPL	family
E1-E2_ATPase	PF00122.15	gi|297621047|ref|YP_003709184.1|	-	4.1	6.3	6.6	5.3	5.9	4.6	1.4	1	1	0	1	1	1	0	E1-E2	ATPase
Man-6-P_recep	PF02157.10	gi|297621048|ref|YP_003709185.1|	-	0.12	11.3	0.0	0.2	10.6	0.0	1.3	1	0	0	1	1	1	0	Mannose-6-phosphate	receptor
Pribosyltran_N	PF13793.1	gi|297621049|ref|YP_003709186.1|	-	8e-50	167.4	0.0	7.7e-46	154.5	0.0	2.2	2	0	0	2	2	2	2	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyl_synth	PF14572.1	gi|297621049|ref|YP_003709186.1|	-	1.9e-26	92.9	0.3	2.2e-24	86.2	0.1	2.5	2	1	1	3	3	3	2	Phosphoribosyl	synthetase-associated	domain
Pribosyltran	PF00156.22	gi|297621049|ref|YP_003709186.1|	-	1.2e-09	37.9	3.6	3.5e-09	36.4	0.8	2.8	3	0	0	3	3	3	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|297621049|ref|YP_003709186.1|	-	0.074	12.2	0.0	0.12	11.5	0.0	1.3	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
Ribosomal_L25p	PF01386.14	gi|297621050|ref|YP_003709187.1|	-	3.3e-21	75.1	0.1	4.8e-21	74.6	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	L25p	family
Ribosomal_TL5_C	PF14693.1	gi|297621050|ref|YP_003709187.1|	-	4.4e-21	74.8	0.1	8.2e-21	74.0	0.1	1.5	1	0	0	1	1	1	1	Ribosomal	protein	TL5,	C-terminal	domain
Pept_tRNA_hydro	PF01195.14	gi|297621051|ref|YP_003709188.1|	-	8e-63	211.2	0.0	9.3e-63	211.0	0.0	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase
MMS22L_N	PF14910.1	gi|297621051|ref|YP_003709188.1|	-	0.00048	18.5	0.0	0.00061	18.1	0.0	1.1	1	0	0	1	1	1	1	S-phase	genomic	integrity	recombination	mediator,	N-terminal
PTS_EIIB	PF00367.15	gi|297621051|ref|YP_003709188.1|	-	0.11	11.7	0.0	0.27	10.4	0.0	1.7	1	0	0	1	1	1	0	phosphotransferase	system,	EIIB
Ribosomal_S6	PF01250.12	gi|297621052|ref|YP_003709189.1|	-	1.3e-26	92.2	0.4	1.6e-26	91.9	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S6
Inhibitor_I71	PF12628.2	gi|297621052|ref|YP_003709189.1|	-	0.042	13.4	0.0	0.05	13.2	0.0	1.1	1	0	0	1	1	1	0	Falstatin,	cysteine	peptidase	inhibitor
Ribosomal_S18	PF01084.15	gi|297621053|ref|YP_003709190.1|	-	1.2e-28	98.7	0.3	1.9e-28	98.0	0.2	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S18
Ribosomal_L9_C	PF03948.9	gi|297621054|ref|YP_003709191.1|	-	2.1e-21	75.7	1.9	3.5e-21	75.0	1.3	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L9,	C-terminal	domain
Ribosomal_L9_N	PF01281.14	gi|297621054|ref|YP_003709191.1|	-	2.6e-18	65.0	0.1	7.4e-18	63.5	0.0	1.8	2	0	0	2	2	2	1	Ribosomal	protein	L9,	N-terminal	domain
Epimerase	PF01370.16	gi|297621055|ref|YP_003709192.1|	-	5.1e-37	127.5	0.0	6.8e-37	127.1	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|297621055|ref|YP_003709192.1|	-	2.1e-07	30.1	0.0	1.6e-06	27.2	0.0	2.3	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.10	gi|297621055|ref|YP_003709192.1|	-	2.3e-06	26.7	0.0	0.011	14.7	0.0	2.6	2	1	0	2	2	2	2	Polysaccharide	biosynthesis	protein
3Beta_HSD	PF01073.14	gi|297621055|ref|YP_003709192.1|	-	5.8e-06	25.2	0.0	1.1e-05	24.2	0.0	1.5	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
adh_short	PF00106.20	gi|297621055|ref|YP_003709192.1|	-	8e-05	22.6	0.0	0.00082	19.3	0.0	2.2	2	0	0	2	2	2	1	short	chain	dehydrogenase
NAD_binding_4	PF07993.7	gi|297621055|ref|YP_003709192.1|	-	0.00072	18.5	0.0	0.74	8.6	0.0	2.2	2	0	0	2	2	2	2	Male	sterility	protein
KR	PF08659.5	gi|297621055|ref|YP_003709192.1|	-	0.0029	17.2	0.0	0.0063	16.1	0.0	1.5	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|297621055|ref|YP_003709192.1|	-	0.035	14.0	0.0	0.13	12.2	0.0	2.0	1	1	0	1	1	1	0	NADH(P)-binding
NmrA	PF05368.8	gi|297621055|ref|YP_003709192.1|	-	0.056	12.6	0.0	0.11	11.7	0.0	1.5	1	0	0	1	1	1	0	NmrA-like	family
DapB_N	PF01113.15	gi|297621055|ref|YP_003709192.1|	-	0.14	12.0	0.1	0.99	9.3	0.0	2.3	2	1	0	2	2	2	0	Dihydrodipicolinate	reductase,	N-terminus
PfkB	PF00294.19	gi|297621056|ref|YP_003709193.1|	-	2.3e-41	141.9	0.5	1.4e-40	139.3	0.3	1.8	1	1	1	2	2	2	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|297621056|ref|YP_003709193.1|	-	1.3e-06	27.7	0.8	0.00013	21.2	0.6	2.3	1	1	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Carb_kinase	PF01256.12	gi|297621056|ref|YP_003709193.1|	-	0.0084	15.4	1.0	0.02	14.1	0.7	1.7	1	1	0	1	1	1	1	Carbohydrate	kinase
HTH_Tnp_1	PF01527.15	gi|297621058|ref|YP_003709195.1|	-	3.5e-11	42.8	0.4	4.5e-11	42.5	0.3	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.1	gi|297621058|ref|YP_003709195.1|	-	1.1e-05	25.3	0.0	1.6e-05	24.7	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297621058|ref|YP_003709195.1|	-	0.00018	21.0	0.0	0.00027	20.4	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
RepB-RCR_reg	PF10723.4	gi|297621058|ref|YP_003709195.1|	-	0.012	15.3	0.1	0.14	11.9	0.0	2.0	2	0	0	2	2	2	0	Replication	regulatory	protein	RepB
HTH_29	PF13551.1	gi|297621058|ref|YP_003709195.1|	-	0.032	14.3	0.0	0.037	14.1	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
MTBP_C	PF14920.1	gi|297621058|ref|YP_003709195.1|	-	0.095	12.1	0.1	0.1	12.0	0.0	1.1	1	0	0	1	1	1	0	MDM2-binding
DivIC	PF04977.10	gi|297621058|ref|YP_003709195.1|	-	0.27	10.7	1.9	0.36	10.3	1.3	1.2	1	0	0	1	1	1	0	Septum	formation	initiator
rve	PF00665.21	gi|297621059|ref|YP_003709196.1|	-	3e-21	75.7	0.0	4.6e-21	75.1	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.1	gi|297621059|ref|YP_003709196.1|	-	4.8e-15	55.3	1.3	9.7e-15	54.3	0.9	1.5	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.1	gi|297621059|ref|YP_003709196.1|	-	1.7e-13	49.8	0.3	3.7e-13	48.7	0.2	1.6	1	0	0	1	1	1	1	Integrase	core	domain
rve_2	PF13333.1	gi|297621059|ref|YP_003709196.1|	-	0.00012	22.0	2.9	0.00024	21.0	2.0	1.6	1	0	0	1	1	1	1	Integrase	core	domain
HpaB_N	PF11794.3	gi|297621059|ref|YP_003709196.1|	-	0.035	13.5	0.4	5	6.4	0.0	2.2	2	0	0	2	2	2	0	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HTH_32	PF13565.1	gi|297621059|ref|YP_003709196.1|	-	0.064	14.0	0.3	0.064	14.0	0.2	2.8	3	1	0	3	3	3	0	Homeodomain-like	domain
DUF601	PF04642.7	gi|297621062|ref|YP_003709199.1|	-	0.15	11.4	0.0	0.23	10.8	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF601
FAD-oxidase_C	PF02913.14	gi|297621063|ref|YP_003709200.1|	-	4.3e-42	144.1	0.0	7.1e-42	143.4	0.0	1.4	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_4	PF01565.18	gi|297621063|ref|YP_003709200.1|	-	4.9e-38	129.7	0.1	1.1e-37	128.5	0.0	1.6	1	0	0	1	1	1	1	FAD	binding	domain
CCG	PF02754.11	gi|297621063|ref|YP_003709200.1|	-	1.3e-08	34.7	0.2	0.00029	20.8	0.0	2.7	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer4_17	PF13534.1	gi|297621063|ref|YP_003709200.1|	-	1.1e-07	32.0	3.3	2.5e-07	30.9	2.3	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|297621063|ref|YP_003709200.1|	-	4.3e-07	29.8	2.9	9.5e-07	28.7	2.0	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|297621063|ref|YP_003709200.1|	-	0.0042	16.8	0.8	0.023	14.4	0.1	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|297621063|ref|YP_003709200.1|	-	0.022	15.1	0.8	0.11	12.9	0.8	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
AstB	PF04996.7	gi|297621064|ref|YP_003709201.1|	-	3.2e-154	513.9	0.0	3.6e-154	513.7	0.0	1.0	1	0	0	1	1	1	1	Succinylarginine	dihydrolase
Aldedh	PF00171.17	gi|297621065|ref|YP_003709202.1|	-	8.2e-112	373.8	0.0	9.8e-112	373.6	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
DDE_3	PF13358.1	gi|297621066|ref|YP_003709203.1|	-	7.9e-29	100.2	0.0	1.3e-28	99.6	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.1	gi|297621066|ref|YP_003709203.1|	-	7.4e-19	67.0	0.1	1.9e-18	65.7	0.1	1.7	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_29	PF13551.1	gi|297621066|ref|YP_003709203.1|	-	9.3e-10	38.6	0.0	2.4e-09	37.3	0.0	1.7	2	0	0	2	2	1	1	Winged	helix-turn	helix
rve	PF00665.21	gi|297621066|ref|YP_003709203.1|	-	3.7e-09	36.7	0.0	5.6e-08	32.9	0.0	2.3	2	0	0	2	2	2	1	Integrase	core	domain
HTH_23	PF13384.1	gi|297621066|ref|YP_003709203.1|	-	7.2e-07	28.6	0.0	2e-06	27.2	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|297621066|ref|YP_003709203.1|	-	2.2e-05	24.3	0.1	8.5e-05	22.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|297621066|ref|YP_003709203.1|	-	0.0003	20.1	0.0	0.00064	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
DDE_Tnp_ISAZ013	PF07592.6	gi|297621066|ref|YP_003709203.1|	-	0.0024	16.6	0.2	0.11	11.2	0.1	2.2	2	0	0	2	2	2	1	Rhodopirellula	transposase	DDE	domain
Terminase_5	PF06056.7	gi|297621066|ref|YP_003709203.1|	-	0.0027	17.2	0.0	0.0054	16.2	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
rve_3	PF13683.1	gi|297621066|ref|YP_003709203.1|	-	0.0038	16.7	0.0	0.013	14.9	0.0	1.9	2	0	0	2	2	1	1	Integrase	core	domain
Sigma70_r4	PF04545.11	gi|297621066|ref|YP_003709203.1|	-	0.012	14.9	0.0	0.034	13.4	0.0	1.8	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_40	PF14493.1	gi|297621066|ref|YP_003709203.1|	-	0.015	15.5	0.0	0.039	14.1	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_32	PF13565.1	gi|297621066|ref|YP_003709203.1|	-	0.032	15.0	1.9	5	7.9	0.0	3.5	2	1	2	4	4	3	0	Homeodomain-like	domain
HTH_38	PF13936.1	gi|297621066|ref|YP_003709203.1|	-	0.048	13.2	0.2	0.88	9.1	0.1	2.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|297621066|ref|YP_003709203.1|	-	0.065	12.8	0.0	0.16	11.6	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
GerE	PF00196.14	gi|297621066|ref|YP_003709203.1|	-	0.081	12.2	0.1	0.3	10.4	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.1	gi|297621066|ref|YP_003709203.1|	-	1.8	8.9	6.1	6	7.2	0.2	3.3	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
AstA	PF04958.7	gi|297621067|ref|YP_003709204.1|	-	7.5e-98	327.1	0.0	8.5e-98	326.9	0.0	1.0	1	0	0	1	1	1	1	Arginine	N-succinyltransferase	beta	subunit
Aminotran_3	PF00202.16	gi|297621068|ref|YP_003709205.1|	-	4.5e-46	157.2	0.0	7.5e-46	156.5	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-III
AAA_22	PF13401.1	gi|297621068|ref|YP_003709205.1|	-	0.035	14.2	0.0	0.088	12.9	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
ATP-synt_J	PF04911.7	gi|297621068|ref|YP_003709205.1|	-	0.086	12.3	0.0	0.19	11.2	0.0	1.6	1	0	0	1	1	1	0	ATP	synthase	j	chain
SLT	PF01464.15	gi|297621068|ref|YP_003709205.1|	-	0.11	12.0	0.0	0.22	10.9	0.0	1.5	1	0	0	1	1	1	0	Transglycosylase	SLT	domain
Peptidase_M20	PF01546.23	gi|297621069|ref|YP_003709206.1|	-	1.5e-19	70.2	0.0	1.9e-19	69.9	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|297621069|ref|YP_003709206.1|	-	4.3e-17	61.8	0.2	1.5e-16	60.1	0.2	1.8	2	0	0	2	2	2	1	Peptidase	dimerisation	domain
DUF4096	PF13340.1	gi|297621070|ref|YP_003709207.1|	-	1.1e-29	102.0	0.9	1.5e-29	101.6	0.6	1.2	1	0	0	1	1	1	1	Putative	transposase	of	IS4/5	family	(DUF4096)
Stap_Strp_tox_C	PF02876.12	gi|297621072|ref|YP_003709209.1|	-	0.055	13.6	0.0	0.061	13.4	0.0	1.1	1	0	0	1	1	1	0	Staphylococcal/Streptococcal	toxin,	beta-grasp	domain
KxDL	PF10241.4	gi|297621073|ref|YP_003709210.1|	-	0.12	12.2	7.4	0.05	13.5	2.3	2.2	1	1	1	2	2	2	0	Uncharacterized	conserved	protein
NPV_P10	PF05531.7	gi|297621073|ref|YP_003709210.1|	-	0.38	11.0	2.0	20	5.5	0.0	2.7	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
DUF3450	PF11932.3	gi|297621073|ref|YP_003709210.1|	-	0.49	9.6	11.0	0.063	12.5	4.1	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
Laminin_II	PF06009.7	gi|297621073|ref|YP_003709210.1|	-	2.2	8.0	8.8	1.1	8.9	3.4	2.0	1	1	1	2	2	2	0	Laminin	Domain	II
Mnd1	PF03962.10	gi|297621073|ref|YP_003709210.1|	-	5.9	6.5	19.3	0.081	12.5	6.4	2.1	1	1	1	2	2	2	0	Mnd1	family
AAA_2	PF07724.9	gi|297621075|ref|YP_003709212.1|	-	4.3e-56	189.4	2.5	1.5e-54	184.4	0.0	2.9	3	0	0	3	3	2	1	AAA	domain	(Cdc48	subfamily)
ClpB_D2-small	PF10431.4	gi|297621075|ref|YP_003709212.1|	-	2.5e-25	88.1	1.8	7.5e-25	86.6	0.0	2.9	3	0	0	3	3	2	1	C-terminal,	D2-small	domain,	of	ClpB	protein
AAA	PF00004.24	gi|297621075|ref|YP_003709212.1|	-	2e-24	86.2	0.1	1.6e-12	47.7	0.0	3.2	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Clp_N	PF02861.15	gi|297621075|ref|YP_003709212.1|	-	1.1e-18	66.8	0.0	3.3e-09	36.5	0.0	3.2	3	0	0	3	3	2	2	Clp	amino	terminal	domain
AAA_5	PF07728.9	gi|297621075|ref|YP_003709212.1|	-	3.9e-17	62.2	0.1	2.7e-12	46.6	0.0	3.1	2	1	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|297621075|ref|YP_003709212.1|	-	7.9e-13	48.7	7.9	0.00098	19.1	0.0	5.4	4	3	1	6	6	4	3	AAA	ATPase	domain
AAA_22	PF13401.1	gi|297621075|ref|YP_003709212.1|	-	4.3e-12	46.3	0.3	0.00046	20.3	0.1	4.2	2	2	0	2	2	2	2	AAA	domain
Sigma54_activat	PF00158.21	gi|297621075|ref|YP_003709212.1|	-	7.6e-09	35.2	0.1	2.2e-05	23.9	0.0	2.9	2	1	0	2	2	2	2	Sigma-54	interaction	domain
IstB_IS21	PF01695.12	gi|297621075|ref|YP_003709212.1|	-	8.5e-08	31.8	0.0	0.0092	15.4	0.0	2.9	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_14	PF13173.1	gi|297621075|ref|YP_003709212.1|	-	1.1e-07	31.7	1.0	0.0016	18.3	0.0	3.3	3	0	0	3	3	2	2	AAA	domain
AAA_17	PF13207.1	gi|297621075|ref|YP_003709212.1|	-	1.8e-06	28.8	4.9	0.0013	19.5	0.0	4.0	4	1	0	4	4	3	1	AAA	domain
NACHT	PF05729.7	gi|297621075|ref|YP_003709212.1|	-	2.6e-05	23.9	0.1	0.51	9.9	0.0	3.7	3	0	0	3	3	3	2	NACHT	domain
AAA_25	PF13481.1	gi|297621075|ref|YP_003709212.1|	-	4.6e-05	22.8	0.0	0.32	10.3	0.0	3.6	3	1	1	4	4	3	2	AAA	domain
RNA_helicase	PF00910.17	gi|297621075|ref|YP_003709212.1|	-	7e-05	22.9	0.0	0.16	12.1	0.0	3.0	3	0	0	3	3	2	1	RNA	helicase
Mg_chelatase	PF01078.16	gi|297621075|ref|YP_003709212.1|	-	9.3e-05	21.6	0.1	0.64	9.1	0.0	3.1	3	0	0	3	3	3	2	Magnesium	chelatase,	subunit	ChlI
RuvB_N	PF05496.7	gi|297621075|ref|YP_003709212.1|	-	9.3e-05	21.5	0.8	0.36	9.8	0.0	3.7	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Zeta_toxin	PF06414.7	gi|297621075|ref|YP_003709212.1|	-	0.00011	21.4	0.0	0.0076	15.3	0.0	2.6	2	0	0	2	2	2	1	Zeta	toxin
DNA_pol3_delta2	PF13177.1	gi|297621075|ref|YP_003709212.1|	-	0.00012	21.7	0.3	0.0031	17.2	0.0	3.4	5	1	0	5	5	2	1	DNA	polymerase	III,	delta	subunit
AAA_18	PF13238.1	gi|297621075|ref|YP_003709212.1|	-	0.00061	20.1	11.6	0.02	15.2	0.0	4.0	4	1	0	4	4	2	2	AAA	domain
Arch_ATPase	PF01637.13	gi|297621075|ref|YP_003709212.1|	-	0.00079	19.1	11.7	2.9	7.5	0.0	5.1	3	2	2	5	5	4	1	Archaeal	ATPase
AAA_10	PF12846.2	gi|297621075|ref|YP_003709212.1|	-	0.00081	18.9	6.8	0.12	11.7	0.0	5.0	4	2	1	6	6	6	1	AAA-like	domain
AAA_33	PF13671.1	gi|297621075|ref|YP_003709212.1|	-	0.0014	18.5	0.0	0.25	11.2	0.0	2.8	2	0	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.22	gi|297621075|ref|YP_003709212.1|	-	0.0023	18.2	2.3	0.43	10.8	0.0	3.6	3	0	0	3	3	3	1	ABC	transporter
PhoH	PF02562.11	gi|297621075|ref|YP_003709212.1|	-	0.0024	17.1	0.0	3.7	6.7	0.0	3.4	3	0	0	3	3	3	0	PhoH-like	protein
T2SE	PF00437.15	gi|297621075|ref|YP_003709212.1|	-	0.0031	16.4	0.0	0.01	14.7	0.0	1.9	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
ResIII	PF04851.10	gi|297621075|ref|YP_003709212.1|	-	0.005	16.6	5.3	5	6.9	0.0	4.6	3	1	1	4	4	3	0	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.1	gi|297621075|ref|YP_003709212.1|	-	0.0071	16.0	0.0	2.4	7.9	0.0	2.5	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_24	PF13479.1	gi|297621075|ref|YP_003709212.1|	-	0.008	15.7	0.0	0.56	9.7	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|297621075|ref|YP_003709212.1|	-	0.0091	14.6	0.0	0.22	10.1	0.0	2.6	3	0	0	3	3	3	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Torsin	PF06309.6	gi|297621075|ref|YP_003709212.1|	-	0.013	15.4	0.0	0.045	13.6	0.0	1.9	2	0	0	2	2	1	0	Torsin
MMR_HSR1	PF01926.18	gi|297621075|ref|YP_003709212.1|	-	0.017	15.1	0.0	2	8.4	0.0	2.9	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
MobB	PF03205.9	gi|297621075|ref|YP_003709212.1|	-	0.024	14.3	0.0	0.38	10.4	0.0	2.5	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF258	PF03193.11	gi|297621075|ref|YP_003709212.1|	-	0.028	13.6	0.0	2.1	7.5	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA_28	PF13521.1	gi|297621075|ref|YP_003709212.1|	-	0.042	13.8	0.0	2.2	8.2	0.0	3.1	3	0	0	3	3	2	0	AAA	domain
UPF0079	PF02367.12	gi|297621075|ref|YP_003709212.1|	-	0.082	12.5	0.0	2.9	7.5	0.0	2.4	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
SRP54	PF00448.17	gi|297621075|ref|YP_003709212.1|	-	0.083	12.3	0.0	2	7.8	0.0	2.5	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
DDE_Tnp_IS66_C	PF13817.1	gi|297621075|ref|YP_003709212.1|	-	0.13	12.3	0.0	1.1	9.2	0.0	2.3	2	0	0	2	2	2	0	IS66	C-terminal	element
AAA_13	PF13166.1	gi|297621075|ref|YP_003709212.1|	-	0.21	9.9	13.0	0.42	9.0	9.0	1.4	1	0	0	1	1	1	0	AAA	domain
DUF87	PF01935.12	gi|297621075|ref|YP_003709212.1|	-	0.59	9.9	11.7	0.79	9.4	0.0	4.2	5	0	0	5	5	5	0	Domain	of	unknown	function	DUF87
Mnd1	PF03962.10	gi|297621075|ref|YP_003709212.1|	-	0.63	9.6	17.5	1.8	8.1	10.5	2.6	2	0	0	2	2	2	0	Mnd1	family
DUF651	PF04895.7	gi|297621075|ref|YP_003709212.1|	-	1.2	8.7	6.1	2.2	7.9	1.4	2.9	2	0	0	2	2	2	0	Archaeal	protein	of	unknown	function	(DUF651)
Atg14	PF10186.4	gi|297621075|ref|YP_003709212.1|	-	2	7.3	14.3	5.2	5.9	9.9	1.7	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
V_ATPase_I	PF01496.14	gi|297621075|ref|YP_003709212.1|	-	2.1	6.1	10.4	3.4	5.4	7.2	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
NPV_P10	PF05531.7	gi|297621075|ref|YP_003709212.1|	-	2.6	8.3	8.6	1.4e+02	2.8	3.0	4.3	3	1	0	3	3	3	0	Nucleopolyhedrovirus	P10	protein
DUF1664	PF07889.7	gi|297621075|ref|YP_003709212.1|	-	3.6	7.4	7.0	0.7	9.6	1.3	2.6	2	1	0	2	2	1	0	Protein	of	unknown	function	(DUF1664)
DUF3373	PF11853.3	gi|297621075|ref|YP_003709212.1|	-	4.6	5.6	4.3	7.9	4.8	3.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3373)
Phage_GP20	PF06810.6	gi|297621075|ref|YP_003709212.1|	-	5.2	6.4	21.3	1.9	7.9	12.1	2.4	3	0	0	3	3	1	0	Phage	minor	structural	protein	GP20
Cob_adeno_trans	PF01923.13	gi|297621077|ref|YP_003709214.1|	-	5.3e-61	205.1	0.0	6.1e-61	204.9	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
YtzH	PF14165.1	gi|297621077|ref|YP_003709214.1|	-	0.04	14.1	0.2	2.5	8.3	0.2	2.7	2	1	0	2	2	2	0	YtzH-like	protein
DUF1660	PF07874.6	gi|297621077|ref|YP_003709214.1|	-	0.13	12.5	0.3	0.36	11.1	0.1	1.7	2	0	0	2	2	2	0	Prophage	protein	(DUF1660)
Transglut_core2	PF13369.1	gi|297621078|ref|YP_003709215.1|	-	7.5e-24	83.9	0.0	1.9e-23	82.6	0.0	1.7	2	0	0	2	2	2	1	Transglutaminase-like	superfamily
TPR_11	PF13414.1	gi|297621078|ref|YP_003709215.1|	-	7.4e-10	38.3	5.4	3.8e-05	23.2	0.4	2.5	2	0	0	2	2	2	2	TPR	repeat
TPR_1	PF00515.23	gi|297621078|ref|YP_003709215.1|	-	6.7e-07	28.6	4.9	0.00078	18.9	0.4	3.5	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297621078|ref|YP_003709215.1|	-	3.6e-06	27.5	0.0	0.1	13.2	0.0	2.9	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297621078|ref|YP_003709215.1|	-	5.4e-06	25.9	6.1	0.0034	17.1	0.3	3.6	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_15	PF13429.1	gi|297621078|ref|YP_003709215.1|	-	3e-05	23.2	1.6	0.00015	20.9	0.3	2.1	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297621078|ref|YP_003709215.1|	-	5.8e-05	22.9	5.1	0.03	14.2	0.2	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|297621078|ref|YP_003709215.1|	-	9.5e-05	22.7	0.5	0.77	10.5	0.0	3.4	2	1	0	2	2	2	2	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|297621078|ref|YP_003709215.1|	-	9.5e-05	22.6	2.1	0.12	12.7	0.0	3.5	3	1	1	4	4	4	3	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297621078|ref|YP_003709215.1|	-	0.00069	19.2	3.1	0.0011	18.6	0.4	2.7	2	1	1	3	3	3	1	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297621078|ref|YP_003709215.1|	-	0.00072	19.6	4.7	0.44	10.7	0.8	2.9	2	1	1	3	3	3	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_17	PF13431.1	gi|297621078|ref|YP_003709215.1|	-	0.012	15.7	0.8	26	5.3	0.0	3.9	4	0	0	4	4	4	0	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|297621078|ref|YP_003709215.1|	-	0.024	14.5	0.5	3.5	7.5	0.0	3.1	2	1	1	3	3	3	0	Tetratricopeptide	repeat
Transglut_core	PF01841.14	gi|297621078|ref|YP_003709215.1|	-	0.025	14.7	0.0	0.06	13.5	0.0	1.6	1	0	0	1	1	1	0	Transglutaminase-like	superfamily
TPR_7	PF13176.1	gi|297621078|ref|YP_003709215.1|	-	0.4	10.5	3.8	1.9	8.4	0.2	3.1	3	0	0	3	3	3	0	Tetratricopeptide	repeat
Glyco_hydro_77	PF02446.12	gi|297621079|ref|YP_003709216.1|	-	4e-33	114.7	9.4	8.4e-17	60.9	0.0	4.0	2	1	1	3	3	3	3	4-alpha-glucanotransferase
IMPDH	PF00478.20	gi|297621080|ref|YP_003709217.1|	-	3e-102	342.1	1.2	5.8e-101	337.8	0.9	1.9	1	1	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
FMN_dh	PF01070.13	gi|297621080|ref|YP_003709217.1|	-	0.0082	15.0	3.4	0.016	14.0	1.9	1.5	1	1	0	1	1	1	1	FMN-dependent	dehydrogenase
Aldolase	PF01081.14	gi|297621080|ref|YP_003709217.1|	-	0.02	14.0	0.6	0.14	11.2	0.0	2.1	1	1	0	2	2	2	0	KDPG	and	KHG	aldolase
PcrB	PF01884.12	gi|297621080|ref|YP_003709217.1|	-	0.055	12.7	0.9	0.17	11.1	0.0	1.9	2	0	0	2	2	2	0	PcrB	family
RRM_3	PF08777.6	gi|297621080|ref|YP_003709217.1|	-	0.059	13.2	0.0	0.1	12.4	0.0	1.4	1	0	0	1	1	1	0	RNA	binding	motif
CesT	PF05932.8	gi|297621082|ref|YP_003709219.1|	-	2.3e-19	69.3	0.0	2.8e-19	69.1	0.0	1.1	1	0	0	1	1	1	1	Tir	chaperone	protein	(CesT)	family
HrpJ	PF07201.6	gi|297621083|ref|YP_003709220.1|	-	1.3e-16	61.0	17.8	8.3e-16	58.4	6.5	3.3	2	1	0	2	2	2	1	HrpJ-like	domain
MobC	PF05713.6	gi|297621083|ref|YP_003709220.1|	-	1.5	8.8	4.4	14	5.7	0.2	2.8	2	0	0	2	2	2	0	Bacterial	mobilisation	protein	(MobC)
FHIPEP	PF00771.15	gi|297621084|ref|YP_003709221.1|	-	6.8e-237	787.9	1.3	7.8e-237	787.7	0.9	1.0	1	0	0	1	1	1	1	FHIPEP	family
DUF3361	PF11841.3	gi|297621084|ref|YP_003709221.1|	-	0.071	12.8	0.2	0.13	11.9	0.2	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3361)
Bac_export_2	PF01312.14	gi|297621085|ref|YP_003709222.1|	-	1.6e-101	339.6	7.8	1.8e-101	339.4	5.4	1.0	1	0	0	1	1	1	1	FlhB	HrpN	YscU	SpaS	Family
YchF-GTPase_C	PF06071.8	gi|297621086|ref|YP_003709223.1|	-	1.2e-34	117.9	0.3	2.4e-34	116.9	0.2	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF933)
MMR_HSR1	PF01926.18	gi|297621086|ref|YP_003709223.1|	-	6.8e-22	77.6	0.0	2e-21	76.0	0.0	1.9	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|297621086|ref|YP_003709223.1|	-	2.5e-08	33.3	0.1	2.5e-07	30.1	0.0	2.6	2	1	0	2	2	2	1	Ferrous	iron	transport	protein	B
TGS	PF02824.16	gi|297621086|ref|YP_003709223.1|	-	0.00034	20.3	1.0	0.0054	16.5	0.2	2.6	2	1	0	2	2	2	1	TGS	domain
Miro	PF08477.8	gi|297621086|ref|YP_003709223.1|	-	0.0013	19.1	0.0	0.0086	16.5	0.0	2.4	1	1	1	2	2	2	1	Miro-like	protein
Dynamin_N	PF00350.18	gi|297621086|ref|YP_003709223.1|	-	0.035	13.9	0.0	2.9	7.6	0.0	2.9	2	1	1	3	3	3	0	Dynamin	family
DNA_pol_B_thumb	PF14791.1	gi|297621088|ref|YP_003709225.1|	-	0.07	12.8	0.0	0.11	12.1	0.0	1.2	1	0	0	1	1	1	0	DNA	polymerase	beta	thumb
LRR_4	PF12799.2	gi|297621089|ref|YP_003709226.1|	-	3.5e-06	26.5	14.7	0.0086	15.6	0.2	5.1	1	1	4	5	5	5	3	Leucine	Rich	repeats	(2	copies)
LRR_1	PF00560.28	gi|297621089|ref|YP_003709226.1|	-	4.6e-05	22.8	16.6	1.3	9.3	0.0	6.9	5	2	1	6	6	6	2	Leucine	Rich	Repeat
LRR_6	PF13516.1	gi|297621089|ref|YP_003709226.1|	-	0.0001	22.0	19.6	0.61	10.3	0.0	7.2	8	0	0	8	8	8	2	Leucine	Rich	repeat
LRR_7	PF13504.1	gi|297621089|ref|YP_003709226.1|	-	0.086	13.0	14.1	22	5.8	0.0	7.0	7	0	0	7	7	7	0	Leucine	rich	repeat
FAD_syn	PF06574.7	gi|297621090|ref|YP_003709227.1|	-	3.9e-40	137.0	0.0	6e-40	136.4	0.0	1.2	1	0	0	1	1	1	1	FAD	synthetase
Flavokinase	PF01687.12	gi|297621090|ref|YP_003709227.1|	-	1.4e-35	121.8	0.0	4.4e-35	120.2	0.0	1.8	2	0	0	2	2	2	1	Riboflavin	kinase
CTP_transf_2	PF01467.21	gi|297621090|ref|YP_003709227.1|	-	0.014	15.4	0.0	0.03	14.3	0.0	1.6	1	0	0	1	1	1	0	Cytidylyltransferase
TruB_N	PF01509.13	gi|297621091|ref|YP_003709228.1|	-	1.8e-49	167.7	0.1	2.4e-49	167.3	0.1	1.2	1	0	0	1	1	1	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
RBFA	PF02033.13	gi|297621092|ref|YP_003709229.1|	-	1e-29	102.6	0.9	1.2e-29	102.3	0.6	1.1	1	0	0	1	1	1	1	Ribosome-binding	factor	A
Recep_L_domain	PF01030.19	gi|297621092|ref|YP_003709229.1|	-	0.069	13.1	0.1	0.098	12.6	0.0	1.3	1	0	0	1	1	1	0	Receptor	L	domain
DUF3194	PF11419.3	gi|297621092|ref|YP_003709229.1|	-	0.2	11.9	1.4	0.49	10.6	0.4	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3194)
GTP_EFTU	PF00009.22	gi|297621093|ref|YP_003709230.1|	-	6.6e-35	120.2	0.7	6.6e-35	120.2	0.5	2.6	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
IF-2	PF11987.3	gi|297621093|ref|YP_003709230.1|	-	1.6e-33	114.8	1.5	1.2e-32	112.0	1.0	2.6	1	0	0	1	1	1	1	Translation-initiation	factor	2
GTP_EFTU_D2	PF03144.20	gi|297621093|ref|YP_003709230.1|	-	1.2e-13	50.9	3.6	7.8e-06	25.9	1.3	3.1	2	0	0	2	2	2	2	Elongation	factor	Tu	domain	2
IF2_N	PF04760.10	gi|297621093|ref|YP_003709230.1|	-	2.5e-11	43.0	0.1	7.7e-11	41.4	0.1	1.9	1	0	0	1	1	1	1	Translation	initiation	factor	IF-2,	N-terminal	region
Ras	PF00071.17	gi|297621093|ref|YP_003709230.1|	-	8.5e-06	25.2	0.0	8.5e-06	25.2	0.0	2.8	3	0	0	3	3	3	1	Ras	family
GTP_EFTU_D4	PF14578.1	gi|297621093|ref|YP_003709230.1|	-	8.8e-06	25.2	3.7	8.8e-06	25.2	2.6	2.8	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	4
Arf	PF00025.16	gi|297621093|ref|YP_003709230.1|	-	2.1e-05	23.8	0.0	2.1e-05	23.8	0.0	3.0	3	1	1	4	4	4	1	ADP-ribosylation	factor	family
ArgK	PF03308.11	gi|297621093|ref|YP_003709230.1|	-	3.1e-05	22.9	1.0	0.0012	17.6	0.1	2.6	2	0	0	2	2	2	1	ArgK	protein
MMR_HSR1	PF01926.18	gi|297621093|ref|YP_003709230.1|	-	4.2e-05	23.4	0.1	0.00015	21.6	0.0	2.0	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
PduV-EutP	PF10662.4	gi|297621093|ref|YP_003709230.1|	-	0.00052	19.5	0.1	0.0018	17.7	0.1	1.9	1	1	0	1	1	1	1	Ethanolamine	utilisation	-	propanediol	utilisation
Miro	PF08477.8	gi|297621093|ref|YP_003709230.1|	-	0.0037	17.7	1.3	0.011	16.2	0.0	2.5	2	0	0	2	2	1	1	Miro-like	protein
Dynamin_N	PF00350.18	gi|297621093|ref|YP_003709230.1|	-	0.57	9.9	7.4	2.6	7.8	0.0	4.0	3	1	1	4	4	4	0	Dynamin	family
NusA_N	PF08529.6	gi|297621094|ref|YP_003709231.1|	-	1.6e-42	144.3	5.0	4.2e-42	143.0	3.4	1.8	1	0	0	1	1	1	1	NusA	N-terminal	domain
KH_5	PF13184.1	gi|297621094|ref|YP_003709231.1|	-	2.8e-25	87.8	1.2	2.8e-24	84.7	0.1	2.7	2	0	0	2	2	2	1	NusA-like	KH	domain
S1	PF00575.18	gi|297621094|ref|YP_003709231.1|	-	9.4e-08	32.0	0.1	9.4e-08	32.0	0.1	2.4	3	0	0	3	3	3	1	S1	RNA	binding	domain
HHH_5	PF14520.1	gi|297621094|ref|YP_003709231.1|	-	0.00066	19.7	0.0	0.0025	17.9	0.0	2.0	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
KH_4	PF13083.1	gi|297621094|ref|YP_003709231.1|	-	0.00069	19.2	0.5	0.0038	16.8	0.1	2.5	2	0	0	2	2	2	1	KH	domain
KH_2	PF07650.12	gi|297621094|ref|YP_003709231.1|	-	0.056	13.0	4.8	0.13	11.8	0.1	3.3	3	1	0	3	3	3	0	KH	domain
S1	PF00575.18	gi|297621095|ref|YP_003709232.1|	-	2.2e-107	351.2	34.4	1.1e-20	73.4	0.2	6.1	6	0	0	6	6	6	6	S1	RNA	binding	domain
S1_2	PF13509.1	gi|297621095|ref|YP_003709232.1|	-	2.6e-09	36.8	9.4	0.023	14.6	0.0	6.6	6	0	0	6	6	6	4	S1	domain
DUF1344	PF07076.6	gi|297621095|ref|YP_003709232.1|	-	0.0011	18.5	2.8	3.1	7.4	0.1	4.4	4	0	0	4	4	4	2	Protein	of	unknown	function	(DUF1344)
MRP-S35	PF10246.4	gi|297621095|ref|YP_003709232.1|	-	0.044	13.7	0.2	12	5.9	0.0	3.0	2	1	1	3	3	3	0	Mitochondrial	ribosomal	protein	MRP-S35
CsrA	PF02599.11	gi|297621095|ref|YP_003709232.1|	-	0.3	10.8	0.1	0.3	10.8	0.0	5.3	7	0	0	7	7	7	0	Global	regulator	protein	family
RNA_pol_Rbc25	PF08292.7	gi|297621095|ref|YP_003709232.1|	-	7.1	6.8	9.9	3.8	7.7	0.0	4.3	6	0	0	6	6	6	0	RNA	polymerase	III	subunit	Rpc25
PTPS	PF01242.14	gi|297621096|ref|YP_003709233.1|	-	1.2e-31	108.9	0.3	1.4e-31	108.7	0.2	1.1	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
AA_kinase	PF00696.23	gi|297621097|ref|YP_003709234.1|	-	3.6e-37	128.2	0.0	4.6e-37	127.8	0.0	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
Branch_AA_trans	PF05525.8	gi|297621099|ref|YP_003709236.1|	-	2.6e-61	207.5	28.9	3.1e-61	207.2	20.1	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	protein
Cyto_ox_2	PF02322.10	gi|297621099|ref|YP_003709236.1|	-	0.048	12.8	21.6	0.025	13.7	7.5	2.1	2	0	0	2	2	2	0	Cytochrome	oxidase	subunit	II
Ribul_P_3_epim	PF00834.14	gi|297621101|ref|YP_003709238.1|	-	1.6e-67	226.5	0.1	3.3e-67	225.4	0.1	1.5	1	1	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
PcrB	PF01884.12	gi|297621101|ref|YP_003709238.1|	-	0.0033	16.7	0.0	0.031	13.5	0.0	2.3	3	0	0	3	3	3	1	PcrB	family
DUF1847	PF08901.6	gi|297621101|ref|YP_003709238.1|	-	0.013	15.0	0.0	0.02	14.3	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1847)
His_biosynth	PF00977.16	gi|297621101|ref|YP_003709238.1|	-	0.02	14.1	0.0	1.7	7.8	0.0	2.5	2	1	0	2	2	2	0	Histidine	biosynthesis	protein
GcpE	PF04551.9	gi|297621101|ref|YP_003709238.1|	-	0.11	11.3	0.0	6.4	5.4	0.0	2.0	1	1	1	2	2	2	0	GcpE	protein
Elong-fact-P_C	PF09285.6	gi|297621102|ref|YP_003709239.1|	-	7.1e-18	63.7	2.5	2.9e-17	61.7	0.1	2.5	2	1	0	2	2	2	1	Elongation	factor	P,	C-terminal
EFP	PF01132.15	gi|297621102|ref|YP_003709239.1|	-	2.4e-13	49.5	0.0	4.6e-13	48.6	0.0	1.5	1	0	0	1	1	1	1	Elongation	factor	P	(EF-P)	OB	domain
EFP_N	PF08207.7	gi|297621102|ref|YP_003709239.1|	-	1.4e-08	34.5	0.3	4.3e-08	32.9	0.1	1.9	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	KOW-like	domain
Biotin_lipoyl	PF00364.17	gi|297621103|ref|YP_003709240.1|	-	1.6e-23	82.1	1.8	1.6e-23	82.1	0.5	1.6	2	0	0	2	2	2	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|297621103|ref|YP_003709240.1|	-	0.015	14.9	0.1	0.026	14.2	0.1	1.5	1	0	0	1	1	1	0	RnfC	Barrel	sandwich	hybrid	domain
Biotin_lipoyl_2	PF13533.1	gi|297621103|ref|YP_003709240.1|	-	0.02	14.5	0.5	0.082	12.5	0.1	2.2	2	0	0	2	2	2	0	Biotin-lipoyl	like
GCV_H	PF01597.14	gi|297621103|ref|YP_003709240.1|	-	0.023	14.3	0.8	0.023	14.3	0.5	2.0	2	0	0	2	2	2	0	Glycine	cleavage	H-protein
HlyD	PF00529.15	gi|297621103|ref|YP_003709240.1|	-	0.028	13.7	0.6	0.045	13.0	0.0	1.6	2	0	0	2	2	2	0	HlyD	family	secretion	protein
HlyD_3	PF13437.1	gi|297621103|ref|YP_003709240.1|	-	0.14	12.5	0.0	0.35	11.2	0.0	1.7	1	0	0	1	1	1	0	HlyD	family	secretion	protein
CPSase_L_D2	PF02786.12	gi|297621104|ref|YP_003709241.1|	-	1.1e-77	260.0	0.2	1.6e-77	259.5	0.2	1.2	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_chain	PF00289.17	gi|297621104|ref|YP_003709241.1|	-	5.6e-42	142.3	0.1	1.7e-41	140.7	0.0	1.9	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Biotin_carb_C	PF02785.14	gi|297621104|ref|YP_003709241.1|	-	1.9e-35	121.0	0.0	3.7e-35	120.1	0.0	1.5	1	0	0	1	1	1	1	Biotin	carboxylase	C-terminal	domain
ATPgrasp_Ter	PF15632.1	gi|297621104|ref|YP_003709241.1|	-	1.7e-17	63.1	0.0	7.2e-17	61.1	0.0	1.9	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_4	PF13535.1	gi|297621104|ref|YP_003709241.1|	-	1.4e-15	57.4	0.1	3.1e-15	56.3	0.1	1.6	1	0	0	1	1	1	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|297621104|ref|YP_003709241.1|	-	1.8e-09	37.3	0.0	6.1e-09	35.5	0.0	1.8	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp	PF02222.17	gi|297621104|ref|YP_003709241.1|	-	1.3e-07	31.1	0.2	3.5e-07	29.7	0.1	1.7	2	0	0	2	2	2	1	ATP-grasp	domain
RimK	PF08443.6	gi|297621104|ref|YP_003709241.1|	-	4.4e-05	23.0	0.1	0.17	11.3	0.0	2.2	2	0	0	2	2	2	2	RimK-like	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|297621104|ref|YP_003709241.1|	-	0.0015	18.3	0.1	0.0039	17.0	0.0	1.7	1	0	0	1	1	1	1	ATP-grasp	domain
Lysine_decarbox	PF03641.9	gi|297621107|ref|YP_003709244.1|	-	6.4e-29	100.4	0.0	1.2e-28	99.6	0.0	1.4	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
DNA_processg_A	PF02481.10	gi|297621107|ref|YP_003709244.1|	-	0.0013	17.6	0.0	0.002	17.0	0.0	1.2	1	0	0	1	1	1	1	DNA	recombination-mediator	protein	A
LacAB_rpiB	PF02502.13	gi|297621107|ref|YP_003709244.1|	-	0.099	12.2	0.0	0.22	11.1	0.0	1.5	2	0	0	2	2	2	0	Ribose/Galactose	Isomerase
Fer4_16	PF13484.1	gi|297621108|ref|YP_003709245.1|	-	9.1e-15	55.1	4.4	2.2e-14	53.9	3.1	1.7	1	0	0	1	1	1	1	4Fe-4S	double	cluster	binding	domain
DUF1730	PF08331.5	gi|297621108|ref|YP_003709245.1|	-	4.3e-13	48.7	0.0	6.6e-13	48.1	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1730)
Fer4_10	PF13237.1	gi|297621108|ref|YP_003709245.1|	-	3e-08	33.3	6.3	5.8e-08	32.4	4.3	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|297621108|ref|YP_003709245.1|	-	2.5e-07	30.8	0.9	0.0076	16.4	0.0	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|297621108|ref|YP_003709245.1|	-	4.8e-06	25.9	7.4	0.014	15.0	1.0	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|297621108|ref|YP_003709245.1|	-	2.5e-05	24.5	8.8	0.00062	20.0	6.5	2.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|297621108|ref|YP_003709245.1|	-	2.9e-05	23.7	7.4	0.024	14.4	1.4	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|297621108|ref|YP_003709245.1|	-	0.00016	21.9	5.1	0.061	13.7	0.1	2.7	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|297621108|ref|YP_003709245.1|	-	0.0018	18.2	9.0	0.0054	16.7	6.1	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|297621108|ref|YP_003709245.1|	-	0.0019	18.0	5.0	0.53	10.1	0.2	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|297621108|ref|YP_003709245.1|	-	0.0022	18.4	11.0	0.17	12.5	0.4	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|297621108|ref|YP_003709245.1|	-	0.0027	17.5	9.3	0.49	10.4	0.3	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|297621108|ref|YP_003709245.1|	-	0.0078	16.4	11.4	0.32	11.4	0.5	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|297621108|ref|YP_003709245.1|	-	0.4	11.0	9.4	3.1	8.2	1.4	2.3	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
DUF2179	PF10035.4	gi|297621109|ref|YP_003709246.1|	-	1.3e-17	63.1	0.0	2.8e-17	62.0	0.0	1.6	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2179)
DUF161	PF02588.10	gi|297621109|ref|YP_003709246.1|	-	5.1e-11	42.7	36.6	9.7e-09	35.4	5.8	2.7	3	0	0	3	3	3	2	Uncharacterized	BCR,	YitT	family	COG1284
DUF2645	PF10840.3	gi|297621109|ref|YP_003709246.1|	-	0.29	11.2	2.9	0.87	9.7	2.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2645)
FMN_red	PF03358.10	gi|297621111|ref|YP_003709248.1|	-	1.4e-35	122.0	0.0	2.1e-35	121.4	0.0	1.2	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.12	gi|297621111|ref|YP_003709248.1|	-	1.1e-11	44.6	0.0	1.2e-11	44.4	0.0	1.1	1	0	0	1	1	1	1	Flavodoxin-like	fold
PSDC	PF12588.3	gi|297621111|ref|YP_003709248.1|	-	0.1	12.1	0.2	6.3	6.4	0.0	2.2	2	0	0	2	2	2	0	Phophatidylserine	decarboxylase
SurE	PF01975.12	gi|297621112|ref|YP_003709249.1|	-	6.4e-65	218.1	0.0	7.9e-65	217.8	0.0	1.1	1	0	0	1	1	1	1	Survival	protein	SurE
AAA_5	PF07728.9	gi|297621114|ref|YP_003709251.1|	-	3.6e-20	72.1	0.0	5.9e-20	71.4	0.0	1.3	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.6	gi|297621114|ref|YP_003709251.1|	-	3.6e-08	33.0	0.0	5.8e-08	32.4	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA	PF00004.24	gi|297621114|ref|YP_003709251.1|	-	1.6e-05	25.1	0.0	2.9e-05	24.2	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|297621114|ref|YP_003709251.1|	-	2e-05	24.7	0.0	9e-05	22.6	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
MCM	PF00493.18	gi|297621114|ref|YP_003709251.1|	-	5.3e-05	22.1	0.0	6.7e-05	21.8	0.0	1.2	1	0	0	1	1	1	1	MCM2/3/5	family
AAA_17	PF13207.1	gi|297621114|ref|YP_003709251.1|	-	7.5e-05	23.5	0.1	0.00033	21.4	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
RuvB_N	PF05496.7	gi|297621114|ref|YP_003709251.1|	-	0.0002	20.5	0.0	0.0006	18.9	0.0	1.8	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_18	PF13238.1	gi|297621114|ref|YP_003709251.1|	-	0.0008	19.7	0.2	0.0038	17.5	0.1	2.3	1	1	1	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|297621114|ref|YP_003709251.1|	-	0.00081	19.2	0.0	0.0034	17.2	0.0	1.8	1	1	0	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|297621114|ref|YP_003709251.1|	-	0.0022	17.8	0.0	0.0053	16.6	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297621114|ref|YP_003709251.1|	-	0.0057	16.6	0.0	0.029	14.3	0.0	1.8	1	1	1	2	2	2	1	AAA	ATPase	domain
NTPase_1	PF03266.10	gi|297621114|ref|YP_003709251.1|	-	0.014	15.0	0.0	0.26	10.9	0.0	2.2	2	0	0	2	2	2	0	NTPase
ATP-synt_ab	PF00006.20	gi|297621114|ref|YP_003709251.1|	-	0.035	13.6	0.0	0.055	12.9	0.0	1.4	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_24	PF13479.1	gi|297621114|ref|YP_003709251.1|	-	0.057	12.9	0.1	0.099	12.2	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_6	PF12774.2	gi|297621114|ref|YP_003709251.1|	-	0.07	12.6	0.1	0.68	9.4	0.1	2.1	1	1	0	1	1	1	0	Hydrolytic	ATP	binding	site	of	dynein	motor	region	D1
AAA_19	PF13245.1	gi|297621114|ref|YP_003709251.1|	-	0.096	12.4	0.0	0.22	11.3	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
TIP49	PF06068.8	gi|297621114|ref|YP_003709251.1|	-	0.097	11.3	0.0	0.17	10.5	0.0	1.3	1	0	0	1	1	1	0	TIP49	C-terminus
IstB_IS21	PF01695.12	gi|297621114|ref|YP_003709251.1|	-	0.1	12.0	0.1	0.16	11.3	0.1	1.5	1	1	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_25	PF13481.1	gi|297621114|ref|YP_003709251.1|	-	0.13	11.6	0.0	0.23	10.8	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|297621114|ref|YP_003709251.1|	-	0.13	12.4	0.0	0.26	11.4	0.0	1.7	1	1	0	1	1	1	0	RNA	helicase
NB-ARC	PF00931.17	gi|297621114|ref|YP_003709251.1|	-	0.14	10.9	0.0	0.22	10.3	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
ATP_bind_3	PF01171.15	gi|297621115|ref|YP_003709252.1|	-	6.1e-21	74.7	0.0	1.1e-20	73.8	0.0	1.4	2	0	0	2	2	2	1	PP-loop	family
tRNA_Me_trans	PF03054.11	gi|297621115|ref|YP_003709252.1|	-	7.8e-05	21.3	0.0	0.0014	17.2	0.0	2.4	1	1	1	2	2	2	1	tRNA	methyl	transferase
Asn_synthase	PF00733.16	gi|297621115|ref|YP_003709252.1|	-	0.0013	18.2	0.0	0.0017	17.9	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
SEC-C	PF02810.10	gi|297621116|ref|YP_003709253.1|	-	5.6e-11	41.7	13.6	1.4e-10	40.4	9.4	1.7	1	0	0	1	1	1	1	SEC-C	motif
Lbh	PF15317.1	gi|297621116|ref|YP_003709253.1|	-	0.032	14.4	0.2	0.049	13.8	0.2	1.4	1	0	0	1	1	1	0	Cardiac	transcription	factor	regulator,	Developmental	protein
ABA_GPCR	PF12430.3	gi|297621117|ref|YP_003709254.1|	-	0.032	13.3	0.4	0.047	12.8	0.3	1.3	1	0	0	1	1	1	0	Abscisic	acid	G-protein	coupled	receptor
DUF2065	PF09838.4	gi|297621117|ref|YP_003709254.1|	-	0.098	12.3	7.1	1.7	8.4	1.1	2.9	2	2	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2065)
COX15-CtaA	PF02628.10	gi|297621117|ref|YP_003709254.1|	-	0.21	10.4	4.2	0.26	10.1	2.9	1.4	1	1	0	1	1	1	0	Cytochrome	oxidase	assembly	protein
DUF373	PF04123.8	gi|297621117|ref|YP_003709254.1|	-	5.6	5.8	9.5	13	4.6	4.6	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF373)
Methyltransf_3	PF01596.12	gi|297621118|ref|YP_003709255.1|	-	9.4e-44	148.9	0.0	1.2e-43	148.5	0.0	1.0	1	0	0	1	1	1	1	O-methyltransferase
Methyltransf_24	PF13578.1	gi|297621118|ref|YP_003709255.1|	-	6.4e-17	62.3	0.0	9.2e-17	61.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297621118|ref|YP_003709255.1|	-	9.6e-15	55.1	0.0	1.4e-14	54.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|297621118|ref|YP_003709255.1|	-	7.1e-12	45.3	0.0	9.1e-12	44.9	0.0	1.1	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.1	gi|297621118|ref|YP_003709255.1|	-	2.8e-10	39.9	0.0	3.5e-10	39.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297621118|ref|YP_003709255.1|	-	7.2e-09	35.7	0.0	1.4e-08	34.7	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|297621118|ref|YP_003709255.1|	-	0.00041	19.5	0.0	0.00055	19.1	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
GCD14	PF08704.5	gi|297621118|ref|YP_003709255.1|	-	0.00091	18.8	0.0	0.0012	18.4	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_11	PF08241.7	gi|297621118|ref|YP_003709255.1|	-	0.0014	19.0	0.0	0.0035	17.7	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|297621118|ref|YP_003709255.1|	-	0.0074	15.8	0.0	0.011	15.3	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
DUF633	PF04816.7	gi|297621118|ref|YP_003709255.1|	-	0.012	15.0	0.0	0.017	14.4	0.0	1.3	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF633)
Cons_hypoth95	PF03602.10	gi|297621118|ref|YP_003709255.1|	-	0.024	14.0	0.0	0.037	13.4	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Methyltransf_23	PF13489.1	gi|297621118|ref|YP_003709255.1|	-	0.025	14.3	0.0	0.044	13.5	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|297621118|ref|YP_003709255.1|	-	0.031	13.8	0.0	0.051	13.1	0.0	1.3	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_30	PF05430.6	gi|297621118|ref|YP_003709255.1|	-	0.048	13.3	0.1	0.13	11.8	0.0	1.6	1	1	0	1	1	1	0	S-adenosyl-L-methionine-dependent	methyltransferase
PMSR	PF01625.16	gi|297621119|ref|YP_003709256.1|	-	8.5e-60	201.1	0.3	1.2e-59	200.6	0.2	1.2	1	0	0	1	1	1	1	Peptide	methionine	sulfoxide	reductase
SelR	PF01641.13	gi|297621119|ref|YP_003709256.1|	-	1.6e-39	134.3	0.0	3.2e-39	133.4	0.0	1.5	1	0	0	1	1	1	1	SelR	domain
Ribosomal_L37e	PF01907.14	gi|297621119|ref|YP_003709256.1|	-	0.0038	16.9	2.9	1.1	9.1	0.1	2.6	2	0	0	2	2	2	2	Ribosomal	protein	L37e
Pyr_redox_3	PF13738.1	gi|297621120|ref|YP_003709257.1|	-	2e-22	80.2	0.1	3.6e-22	79.4	0.1	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|297621120|ref|YP_003709257.1|	-	8e-15	55.2	0.0	1.3e-14	54.5	0.0	1.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|297621120|ref|YP_003709257.1|	-	3.4e-10	39.3	0.1	2.6e-07	29.8	0.0	2.2	2	0	0	2	2	2	2	L-lysine	6-monooxygenase	(NADPH-requiring)
Pyr_redox	PF00070.22	gi|297621120|ref|YP_003709257.1|	-	2.7e-08	34.1	0.1	0.0045	17.3	0.1	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|297621120|ref|YP_003709257.1|	-	2e-05	23.2	3.6	0.0089	14.5	0.0	2.8	3	0	0	3	3	3	2	HI0933-like	protein
DAO	PF01266.19	gi|297621120|ref|YP_003709257.1|	-	2.3e-05	23.4	1.2	0.18	10.7	0.0	2.9	2	1	0	3	3	3	2	FAD	dependent	oxidoreductase
NAD_binding_9	PF13454.1	gi|297621120|ref|YP_003709257.1|	-	0.00017	21.3	0.4	0.072	12.8	0.0	2.5	2	0	0	2	2	2	2	FAD-NAD(P)-binding
FAD_binding_3	PF01494.14	gi|297621120|ref|YP_003709257.1|	-	0.00063	18.8	0.1	0.0013	17.9	0.0	1.5	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_7	PF13241.1	gi|297621120|ref|YP_003709257.1|	-	0.002	18.3	0.1	0.047	13.9	0.0	2.4	2	2	0	2	2	2	1	Putative	NAD(P)-binding
Lycopene_cycl	PF05834.7	gi|297621120|ref|YP_003709257.1|	-	0.029	13.3	0.3	2.4	6.9	0.1	2.8	3	0	0	3	3	3	0	Lycopene	cyclase	protein
Thi4	PF01946.12	gi|297621120|ref|YP_003709257.1|	-	0.041	12.9	0.5	2.4	7.1	0.0	2.3	2	0	0	2	2	2	0	Thi4	family
ThiF	PF00899.16	gi|297621120|ref|YP_003709257.1|	-	0.044	13.6	0.1	0.18	11.6	0.0	1.9	2	0	0	2	2	2	0	ThiF	family
FAD_binding_2	PF00890.19	gi|297621120|ref|YP_003709257.1|	-	0.055	12.2	3.2	0.86	8.3	0.2	2.9	2	1	1	3	3	3	0	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|297621120|ref|YP_003709257.1|	-	0.067	13.2	0.0	0.26	11.3	0.0	2.1	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.17	gi|297621120|ref|YP_003709257.1|	-	0.24	10.2	8.9	3.9	6.2	0.1	3.4	3	1	0	4	4	4	0	Glucose	inhibited	division	protein	A
FAD_oxidored	PF12831.2	gi|297621120|ref|YP_003709257.1|	-	4.5	6.2	6.2	2.7	6.9	0.2	2.5	2	1	0	2	2	2	0	FAD	dependent	oxidoreductase
DUF2157	PF09925.4	gi|297621121|ref|YP_003709258.1|	-	0.56	9.7	9.4	4.9	6.7	6.5	2.1	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2157)
Aconitase	PF00330.15	gi|297621123|ref|YP_003709260.1|	-	2.3e-139	464.8	0.0	4e-93	312.4	0.0	2.1	2	0	0	2	2	2	2	Aconitase	family	(aconitate	hydratase)
Aconitase_C	PF00694.14	gi|297621123|ref|YP_003709260.1|	-	3.2e-40	137.2	0.0	6.9e-40	136.1	0.0	1.6	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
dCMP_cyt_deam_1	PF00383.17	gi|297621124|ref|YP_003709261.1|	-	5.3e-09	35.6	0.2	6.7e-09	35.3	0.1	1.1	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
Bd3614-deam	PF14439.1	gi|297621124|ref|YP_003709261.1|	-	0.005	16.6	3.4	0.55	10.0	2.4	2.1	1	1	0	1	1	1	1	Bd3614-like	deaminase
MafB19-deam	PF14437.1	gi|297621124|ref|YP_003709261.1|	-	0.031	13.9	0.0	0.044	13.4	0.0	1.3	1	0	0	1	1	1	0	MafB19-like	deaminase
DUF1551	PF07585.6	gi|297621126|ref|YP_003709263.1|	-	1.1e-22	80.4	0.1	1.3e-22	80.1	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1551)
Legionella_OMP	PF05150.7	gi|297621126|ref|YP_003709263.1|	-	0.019	14.1	0.0	0.034	13.2	0.0	1.4	1	0	0	1	1	1	0	Legionella	pneumophila	major	outer	membrane	protein	precursor
EamA	PF00892.15	gi|297621127|ref|YP_003709264.1|	-	4.2e-37	126.9	35.2	5.1e-22	78.2	11.2	2.1	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|297621127|ref|YP_003709264.1|	-	8.6e-06	25.9	32.7	0.0037	17.4	3.6	3.0	2	2	1	3	3	3	2	Multidrug	resistance	efflux	transporter
DUF914	PF06027.7	gi|297621127|ref|YP_003709264.1|	-	0.0015	17.4	10.8	0.002	17.0	7.1	1.3	1	1	0	1	1	1	1	Eukaryotic	protein	of	unknown	function	(DUF914)
RseC_MucC	PF04246.7	gi|297621127|ref|YP_003709264.1|	-	0.0026	17.3	0.5	0.0026	17.3	0.4	3.7	2	1	0	4	4	4	1	Positive	regulator	of	sigma(E),	RseC/MucC
TPT	PF03151.11	gi|297621127|ref|YP_003709264.1|	-	0.0031	17.1	22.3	0.0058	16.2	7.7	2.5	2	1	0	2	2	2	2	Triose-phosphate	Transporter	family
UPF0233	PF06781.7	gi|297621127|ref|YP_003709264.1|	-	2.5	7.7	6.8	8.1	6.1	1.5	2.9	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0233)
NMN_transporter	PF04973.7	gi|297621128|ref|YP_003709265.1|	-	1.6e-06	27.7	8.2	1.9e-06	27.4	5.7	1.0	1	0	0	1	1	1	1	Nicotinamide	mononucleotide	transporter
DUF4491	PF14898.1	gi|297621128|ref|YP_003709265.1|	-	0.7	10.0	4.5	1.3	9.2	3.1	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4491)
TK	PF00265.13	gi|297621129|ref|YP_003709266.1|	-	3.7e-52	176.4	0.1	4.3e-52	176.2	0.1	1.0	1	0	0	1	1	1	1	Thymidine	kinase
zf-UDP	PF14569.1	gi|297621129|ref|YP_003709266.1|	-	0.35	10.6	3.4	1.8	8.3	2.3	2.1	1	1	0	1	1	1	0	Zinc-binding	RING-finger
zf-HIT	PF04438.11	gi|297621129|ref|YP_003709266.1|	-	1.8	8.2	0.0	1.8	8.2	0.0	3.6	4	0	0	4	4	4	0	HIT	zinc	finger
ABC_tran	PF00005.22	gi|297621130|ref|YP_003709267.1|	-	7.3e-48	162.3	4.4	1.1e-22	80.8	0.0	3.9	4	0	0	4	4	4	2	ABC	transporter
AAA_21	PF13304.1	gi|297621130|ref|YP_003709267.1|	-	4e-17	63.1	18.4	0.0001	22.3	0.2	5.3	3	2	1	5	5	5	4	AAA	domain
ABC_tran_2	PF12848.2	gi|297621130|ref|YP_003709267.1|	-	6.2e-14	51.6	4.5	6.2e-14	51.6	3.1	2.8	3	0	0	3	3	2	1	ABC	transporter
SMC_N	PF02463.14	gi|297621130|ref|YP_003709267.1|	-	3.3e-10	39.5	2.3	0.0039	16.4	0.0	4.4	3	1	0	4	4	4	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|297621130|ref|YP_003709267.1|	-	8.6e-09	34.8	0.2	0.00075	18.9	0.1	2.4	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|297621130|ref|YP_003709267.1|	-	4.1e-06	26.0	0.2	0.05	12.7	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
MobB	PF03205.9	gi|297621130|ref|YP_003709267.1|	-	1.1e-05	25.1	0.7	0.093	12.4	0.0	2.9	3	0	0	3	3	3	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Miro	PF08477.8	gi|297621130|ref|YP_003709267.1|	-	2.2e-05	24.9	0.0	0.16	12.4	0.0	2.8	2	0	0	2	2	2	2	Miro-like	protein
MMR_HSR1	PF01926.18	gi|297621130|ref|YP_003709267.1|	-	3.1e-05	23.9	0.6	0.085	12.8	0.0	2.9	2	1	0	2	2	2	2	50S	ribosome-binding	GTPase
AAA_17	PF13207.1	gi|297621130|ref|YP_003709267.1|	-	4.2e-05	24.3	0.2	0.1	13.4	0.0	3.8	4	1	0	4	4	4	1	AAA	domain
AAA_10	PF12846.2	gi|297621130|ref|YP_003709267.1|	-	8.6e-05	22.1	0.1	0.23	10.8	0.0	2.4	2	0	0	2	2	2	2	AAA-like	domain
SbcCD_C	PF13558.1	gi|297621130|ref|YP_003709267.1|	-	0.00019	21.3	0.5	0.067	13.1	0.2	3.3	2	1	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
NACHT	PF05729.7	gi|297621130|ref|YP_003709267.1|	-	0.00048	19.8	0.0	0.15	11.6	0.0	2.5	2	0	0	2	2	2	1	NACHT	domain
AAA_23	PF13476.1	gi|297621130|ref|YP_003709267.1|	-	0.00056	20.3	31.3	0.0023	18.2	4.4	3.3	2	2	0	2	2	2	1	AAA	domain
RNA_helicase	PF00910.17	gi|297621130|ref|YP_003709267.1|	-	0.00072	19.7	0.1	0.51	10.5	0.0	2.7	2	0	0	2	2	2	1	RNA	helicase
AAA_22	PF13401.1	gi|297621130|ref|YP_003709267.1|	-	0.0022	18.1	3.2	0.14	12.2	0.1	3.4	3	2	1	4	4	2	1	AAA	domain
AAA	PF00004.24	gi|297621130|ref|YP_003709267.1|	-	0.0026	17.9	2.0	0.55	10.4	0.1	3.6	3	2	0	3	3	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
FtsK_SpoIIIE	PF01580.13	gi|297621130|ref|YP_003709267.1|	-	0.0035	16.8	0.0	0.61	9.5	0.0	2.4	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_33	PF13671.1	gi|297621130|ref|YP_003709267.1|	-	0.0036	17.1	0.4	3.5	7.4	0.0	3.0	3	0	0	3	3	3	1	AAA	domain
AAA_18	PF13238.1	gi|297621130|ref|YP_003709267.1|	-	0.0092	16.2	7.2	5.8	7.2	0.0	4.1	3	1	0	3	3	2	0	AAA	domain
AAA_25	PF13481.1	gi|297621130|ref|YP_003709267.1|	-	0.013	14.8	0.0	4.8	6.5	0.0	2.7	2	1	0	2	2	2	0	AAA	domain
DUF87	PF01935.12	gi|297621130|ref|YP_003709267.1|	-	0.017	14.9	17.9	1.9	8.2	5.0	4.5	3	1	0	3	3	3	0	Domain	of	unknown	function	DUF87
PduV-EutP	PF10662.4	gi|297621130|ref|YP_003709267.1|	-	0.048	13.1	0.1	9.7	5.6	0.0	2.5	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
Dynamin_N	PF00350.18	gi|297621130|ref|YP_003709267.1|	-	0.074	12.8	9.4	0.86	9.3	0.0	3.7	4	0	0	4	4	4	0	Dynamin	family
Spore_III_AB	PF09548.5	gi|297621130|ref|YP_003709267.1|	-	0.09	12.5	0.3	0.09	12.5	0.2	3.0	3	0	0	3	3	3	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
Atg14	PF10186.4	gi|297621130|ref|YP_003709267.1|	-	0.16	10.8	15.7	0.014	14.3	3.2	2.1	2	0	0	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Lge1	PF11488.3	gi|297621130|ref|YP_003709267.1|	-	0.34	11.1	6.4	0.094	12.9	1.7	2.1	2	0	0	2	2	2	0	Transcriptional	regulatory	protein	LGE1
AAA_16	PF13191.1	gi|297621130|ref|YP_003709267.1|	-	0.55	10.1	6.9	6.9	6.6	0.0	3.8	4	0	0	4	4	4	0	AAA	ATPase	domain
SnoaL	PF07366.7	gi|297621131|ref|YP_003709268.1|	-	1e-10	41.2	0.0	1.3e-10	40.9	0.0	1.1	1	0	0	1	1	1	1	SnoaL-like	polyketide	cyclase
SnoaL_2	PF12680.2	gi|297621131|ref|YP_003709268.1|	-	1.3e-08	35.1	0.0	1.5e-08	34.9	0.0	1.1	1	0	0	1	1	1	1	SnoaL-like	domain
DUF4440	PF14534.1	gi|297621131|ref|YP_003709268.1|	-	0.0053	16.9	0.0	0.0067	16.6	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4440)
Nepo_coat_C	PF03688.9	gi|297621131|ref|YP_003709268.1|	-	0.098	12.2	0.0	0.17	11.5	0.0	1.4	1	1	0	1	1	1	0	Nepovirus	coat	protein,	C-terminal	domain
DUF555	PF04475.7	gi|297621131|ref|YP_003709268.1|	-	0.12	12.4	0.0	0.18	11.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF555)
PolyA_pol	PF01743.15	gi|297621132|ref|YP_003709269.1|	-	2.4e-06	27.7	0.0	0.0029	17.7	0.0	2.4	2	0	0	2	2	2	2	Poly	A	polymerase	head	domain
GDPD	PF03009.12	gi|297621133|ref|YP_003709270.1|	-	2.7e-37	128.6	0.0	8.1e-37	127.1	0.0	1.6	1	1	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
GDPD_2	PF13653.1	gi|297621133|ref|YP_003709270.1|	-	0.0002	21.4	0.2	0.00036	20.6	0.1	1.4	1	0	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
SCP2	PF02036.12	gi|297621133|ref|YP_003709270.1|	-	0.023	15.0	0.0	0.071	13.4	0.0	1.8	2	0	0	2	2	2	0	SCP-2	sterol	transfer	family
DAO	PF01266.19	gi|297621134|ref|YP_003709271.1|	-	8.3e-46	156.5	0.0	1e-45	156.2	0.0	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
3HCDH_N	PF02737.13	gi|297621134|ref|YP_003709271.1|	-	0.0035	17.0	0.0	0.0062	16.2	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
HI0933_like	PF03486.9	gi|297621134|ref|YP_003709271.1|	-	0.0075	14.7	0.5	0.011	14.2	0.3	1.2	1	0	0	1	1	1	1	HI0933-like	protein
Pyr_redox_2	PF07992.9	gi|297621134|ref|YP_003709271.1|	-	0.0076	16.1	0.0	0.014	15.3	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|297621134|ref|YP_003709271.1|	-	0.03	13.3	1.1	0.049	12.7	0.8	1.3	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|297621134|ref|YP_003709271.1|	-	0.043	13.8	1.0	0.11	12.4	0.5	1.9	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.17	gi|297621134|ref|YP_003709271.1|	-	0.06	12.1	0.1	0.11	11.3	0.1	1.4	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
Synaptobrevin	PF00957.16	gi|297621134|ref|YP_003709271.1|	-	0.088	12.4	0.0	0.2	11.2	0.0	1.5	1	0	0	1	1	1	0	Synaptobrevin
Lycopene_cycl	PF05834.7	gi|297621134|ref|YP_003709271.1|	-	0.15	10.9	0.3	0.23	10.3	0.2	1.2	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Pyr_redox	PF00070.22	gi|297621134|ref|YP_003709271.1|	-	0.16	12.3	1.8	0.23	11.8	0.1	2.0	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|297621134|ref|YP_003709271.1|	-	0.45	9.3	2.4	0.68	8.7	1.6	1.2	1	0	0	1	1	1	0	FAD	binding	domain
UPF0118	PF01594.11	gi|297621135|ref|YP_003709272.1|	-	5.7e-45	153.7	40.8	7e-45	153.4	28.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF20
MHC2-interact	PF09307.5	gi|297621135|ref|YP_003709272.1|	-	0.51	10.1	1.9	9.6	6.0	0.0	2.5	3	0	0	3	3	3	0	CLIP,	MHC2	interacting
CxxCxxCC	PF03692.10	gi|297621136|ref|YP_003709273.1|	-	9.1e-15	54.9	3.4	1.2e-14	54.5	2.3	1.2	1	0	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
Fer4_15	PF13459.1	gi|297621136|ref|YP_003709273.1|	-	0.1	13.1	0.6	0.29	11.7	0.1	2.0	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Glyco_transf_92	PF01697.22	gi|297621137|ref|YP_003709274.1|	-	1.9e-27	96.3	8.5	3.4e-27	95.5	5.9	1.4	1	1	0	1	1	1	1	Glycosyltransferase	family	92
Glyco_tranf_2_4	PF13704.1	gi|297621137|ref|YP_003709274.1|	-	9.8e-16	57.8	0.1	1.6e-15	57.1	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glycos_transf_2	PF00535.21	gi|297621137|ref|YP_003709274.1|	-	0.0077	15.9	0.2	0.036	13.7	0.2	2.1	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
DUF955	PF06114.8	gi|297621138|ref|YP_003709275.1|	-	9.3e-09	35.0	0.0	1.3e-08	34.5	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF955)
PS_Dcarbxylase	PF02666.10	gi|297621139|ref|YP_003709276.1|	-	3.4e-10	39.5	0.0	3.3e-09	36.3	0.0	2.3	1	1	0	1	1	1	1	Phosphatidylserine	decarboxylase
LINES_N	PF14694.1	gi|297621139|ref|YP_003709276.1|	-	0.0012	18.1	1.6	0.01	15.1	0.0	2.6	3	0	0	3	3	3	1	Lines	N-terminus
YXWGXW	PF12779.2	gi|297621140|ref|YP_003709277.1|	-	0.0068	16.2	18.6	0.013	15.3	5.3	7.9	7	1	1	8	8	8	5	YXWGXW	repeat	(2	copies)
UvrC_HhH_N	PF08459.6	gi|297621141|ref|YP_003709278.1|	-	4.6e-52	175.6	0.2	1.3e-51	174.1	0.1	1.8	1	0	0	1	1	1	1	UvrC	Helix-hairpin-helix	N-terminal
GIY-YIG	PF01541.19	gi|297621141|ref|YP_003709278.1|	-	8.1e-12	45.3	0.0	4.6e-11	42.9	0.0	2.4	1	0	0	1	1	1	1	GIY-YIG	catalytic	domain
HHH_5	PF14520.1	gi|297621141|ref|YP_003709278.1|	-	6e-09	35.9	0.5	6e-09	35.9	0.4	2.4	3	0	0	3	3	3	1	Helix-hairpin-helix	domain
HHH_2	PF12826.2	gi|297621141|ref|YP_003709278.1|	-	2.6e-08	33.6	0.0	6e-08	32.4	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH	PF00633.18	gi|297621141|ref|YP_003709278.1|	-	1.5e-07	30.7	0.3	7e-06	25.4	0.1	2.6	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
UVR	PF02151.14	gi|297621141|ref|YP_003709278.1|	-	8.1e-07	28.3	1.2	2.4e-06	26.8	0.8	1.9	1	0	0	1	1	1	1	UvrB/uvrC	motif
5_3_exonuc	PF01367.15	gi|297621141|ref|YP_003709278.1|	-	0.074	13.2	0.1	0.26	11.5	0.0	1.9	2	0	0	2	2	2	0	5'-3'	exonuclease,	C-terminal	SAM	fold
BLOC1_2	PF10046.4	gi|297621142|ref|YP_003709279.1|	-	0.023	14.8	0.1	0.062	13.4	0.1	1.7	1	0	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
HGTP_anticodon	PF03129.15	gi|297621143|ref|YP_003709280.1|	-	4.8e-13	48.8	0.3	1.1e-12	47.7	0.2	1.6	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA_SAD	PF07973.9	gi|297621143|ref|YP_003709280.1|	-	0.04	13.8	0.0	0.09	12.6	0.0	1.6	1	0	0	1	1	1	0	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
MotCF	PF09158.5	gi|297621143|ref|YP_003709280.1|	-	0.11	12.1	0.4	0.76	9.4	0.1	2.2	2	0	0	2	2	2	0	Bacteriophage	T4	MotA,	C-terminal
IF3_C	PF00707.17	gi|297621144|ref|YP_003709281.1|	-	2.5e-34	116.8	2.5	3.5e-34	116.4	1.7	1.2	1	0	0	1	1	1	1	Translation	initiation	factor	IF-3,	C-terminal	domain
IF3_N	PF05198.11	gi|297621144|ref|YP_003709281.1|	-	1.1e-33	114.9	0.4	2.7e-33	113.7	0.1	1.8	2	0	0	2	2	2	1	Translation	initiation	factor	IF-3,	N-terminal	domain
mIF3	PF14877.1	gi|297621144|ref|YP_003709281.1|	-	0.033	13.5	4.4	0.053	12.8	2.9	1.5	1	1	0	1	1	1	0	Mitochondrial	translation	initiation	factor
Ribosomal_L35p	PF01632.14	gi|297621145|ref|YP_003709282.1|	-	1.7e-20	72.6	7.7	1.9e-20	72.5	5.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L35
Ribosomal_L20	PF00453.13	gi|297621146|ref|YP_003709283.1|	-	2e-40	137.0	5.8	2.2e-40	136.8	4.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L20
Ets	PF00178.17	gi|297621146|ref|YP_003709283.1|	-	0.0094	16.0	2.4	0.019	15.1	1.7	1.6	1	0	0	1	1	1	1	Ets-domain
tRNA-synt_2d	PF01409.15	gi|297621147|ref|YP_003709284.1|	-	1.9e-94	315.4	0.0	2.3e-94	315.1	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
Phe_tRNA-synt_N	PF02912.13	gi|297621147|ref|YP_003709284.1|	-	4.7e-18	64.6	1.3	7.2e-18	64.0	0.7	1.5	1	1	0	1	1	1	1	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
tRNA-synt_2	PF00152.15	gi|297621147|ref|YP_003709284.1|	-	0.026	13.2	0.0	5.4	5.6	0.0	2.7	3	0	0	3	3	3	0	tRNA	synthetases	class	II	(D,	K	and	N)
PseudoU_synth_2	PF00849.17	gi|297621148|ref|YP_003709285.1|	-	3.7e-24	85.4	0.0	4.1e-22	78.7	0.0	2.2	2	0	0	2	2	2	2	RNA	pseudouridylate	synthase
S4	PF01479.20	gi|297621148|ref|YP_003709285.1|	-	2.3e-06	26.9	0.1	4.3e-06	26.0	0.1	1.5	1	0	0	1	1	1	1	S4	domain
S4_2	PF13275.1	gi|297621148|ref|YP_003709285.1|	-	0.00043	19.8	0.0	0.0015	18.1	0.0	1.9	2	0	0	2	2	2	1	S4	domain
Glyco_transf_9	PF01075.12	gi|297621149|ref|YP_003709286.1|	-	7.8e-23	80.9	0.0	9.6e-23	80.6	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	family	9	(heptosyltransferase)
Topoisom_bac	PF01131.15	gi|297621150|ref|YP_003709287.1|	-	3e-112	375.4	2.7	3.6e-112	375.1	1.9	1.1	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|297621150|ref|YP_003709287.1|	-	1.6e-13	50.4	0.0	5.6e-13	48.7	0.0	2.0	1	0	0	1	1	1	1	Toprim	domain
Toprim_Crpt	PF13342.1	gi|297621150|ref|YP_003709287.1|	-	0.0046	16.5	0.4	0.052	13.1	0.1	2.6	2	0	0	2	2	2	1	C-terminal	repeat	of	topoisomerase
SBP_bac_8	PF13416.1	gi|297621151|ref|YP_003709288.1|	-	1e-23	84.4	0.0	1.3e-23	84.1	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.1	gi|297621151|ref|YP_003709288.1|	-	1e-22	80.6	0.0	1.2e-22	80.4	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|297621151|ref|YP_003709288.1|	-	2.9e-12	46.9	0.0	5.1e-12	46.1	0.0	1.4	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_11	PF13531.1	gi|297621151|ref|YP_003709288.1|	-	7.5e-07	29.0	0.0	1.1e-06	28.4	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
BPD_transp_1	PF00528.17	gi|297621152|ref|YP_003709289.1|	-	8.5e-20	71.0	16.7	8.5e-20	71.0	11.6	2.1	2	0	0	2	2	2	2	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|297621153|ref|YP_003709290.1|	-	2.3e-06	27.2	32.4	0.00021	20.8	22.5	2.2	1	1	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
VanZ	PF04892.7	gi|297621153|ref|YP_003709290.1|	-	0.076	12.9	0.1	0.076	12.9	0.0	2.9	1	1	1	3	3	3	0	VanZ	like	family
DUF2636	PF11120.3	gi|297621153|ref|YP_003709290.1|	-	0.096	12.2	2.2	1.1	8.8	0.2	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2636)
ABC_tran	PF00005.22	gi|297621154|ref|YP_003709291.1|	-	1.6e-37	128.8	0.0	2.8e-37	128.0	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297621154|ref|YP_003709291.1|	-	1.1e-12	48.6	2.4	5.2e-08	33.1	0.3	2.4	1	1	1	2	2	2	2	AAA	domain
TOBE_2	PF08402.5	gi|297621154|ref|YP_003709291.1|	-	9.6e-12	44.7	0.0	2.1e-11	43.6	0.0	1.6	1	0	0	1	1	1	1	TOBE	domain
AAA_16	PF13191.1	gi|297621154|ref|YP_003709291.1|	-	3.6e-05	23.8	0.0	6.4e-05	23.0	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|297621154|ref|YP_003709291.1|	-	3.8e-05	23.8	1.3	0.0007	19.7	0.9	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|297621154|ref|YP_003709291.1|	-	6.6e-05	22.1	0.1	0.14	11.1	0.0	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|297621154|ref|YP_003709291.1|	-	0.00033	19.9	0.6	0.001	18.3	0.4	1.7	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
DUF258	PF03193.11	gi|297621154|ref|YP_003709291.1|	-	0.002	17.3	0.0	0.0034	16.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Arch_ATPase	PF01637.13	gi|297621154|ref|YP_003709291.1|	-	0.0053	16.4	0.0	0.0077	15.9	0.0	1.4	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|297621154|ref|YP_003709291.1|	-	0.008	16.0	0.0	0.024	14.5	0.0	1.9	1	1	1	2	2	2	1	AAA	domain
ABC_ATPase	PF09818.4	gi|297621154|ref|YP_003709291.1|	-	0.0082	14.7	0.0	0.35	9.4	0.0	2.7	2	1	1	3	3	3	1	Predicted	ATPase	of	the	ABC	class
AAA_17	PF13207.1	gi|297621154|ref|YP_003709291.1|	-	0.0086	16.8	0.3	0.027	15.2	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|297621154|ref|YP_003709291.1|	-	0.011	15.9	0.5	0.094	12.9	0.3	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.1	gi|297621154|ref|YP_003709291.1|	-	0.018	15.0	0.0	0.046	13.6	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
AAA_23	PF13476.1	gi|297621154|ref|YP_003709291.1|	-	0.018	15.3	1.8	0.033	14.5	0.9	1.6	1	1	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|297621154|ref|YP_003709291.1|	-	0.019	15.4	0.0	0.061	13.8	0.0	1.9	1	0	0	1	1	1	0	Miro-like	protein
NB-ARC	PF00931.17	gi|297621154|ref|YP_003709291.1|	-	0.039	12.8	0.2	0.52	9.1	0.0	2.1	2	0	0	2	2	2	0	NB-ARC	domain
Rad17	PF03215.10	gi|297621154|ref|YP_003709291.1|	-	0.043	12.4	0.0	0.058	12.0	0.0	1.1	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
AAA_29	PF13555.1	gi|297621154|ref|YP_003709291.1|	-	0.052	13.0	0.0	0.11	11.9	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.1	gi|297621154|ref|YP_003709291.1|	-	0.066	13.5	3.8	0.083	13.1	0.6	2.6	2	1	1	3	3	2	0	AAA	domain
AAA_25	PF13481.1	gi|297621154|ref|YP_003709291.1|	-	0.071	12.4	0.3	0.27	10.5	0.1	2.0	2	1	0	2	2	2	0	AAA	domain
PhoH	PF02562.11	gi|297621154|ref|YP_003709291.1|	-	0.1	11.7	0.0	1.7	7.8	0.0	2.2	2	0	0	2	2	2	0	PhoH-like	protein
NACHT	PF05729.7	gi|297621154|ref|YP_003709291.1|	-	0.11	12.1	0.0	0.22	11.1	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
Radical_SAM	PF04055.16	gi|297621155|ref|YP_003709292.1|	-	5e-14	52.8	0.0	6.8e-14	52.3	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|297621155|ref|YP_003709292.1|	-	4.1e-05	23.5	0.0	0.0002	21.3	0.0	2.1	3	0	0	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|297621155|ref|YP_003709292.1|	-	0.06	13.4	0.4	0.34	11.0	0.3	1.9	1	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
AAA_26	PF13500.1	gi|297621156|ref|YP_003709293.1|	-	1.7e-37	128.9	0.0	1.3e-36	126.0	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
DRTGG	PF07085.7	gi|297621156|ref|YP_003709293.1|	-	1.7e-12	46.8	0.0	3.4e-12	45.8	0.0	1.5	1	0	0	1	1	1	1	DRTGG	domain
CbiA	PF01656.18	gi|297621156|ref|YP_003709293.1|	-	0.0044	16.4	0.3	0.0098	15.3	0.2	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
NUDIX	PF00293.23	gi|297621157|ref|YP_003709294.1|	-	6e-16	58.3	0.1	8.1e-16	57.8	0.1	1.1	1	0	0	1	1	1	1	NUDIX	domain
Imm18	PF15566.1	gi|297621159|ref|YP_003709296.1|	-	8.1e-25	85.9	0.5	1.1e-24	85.4	0.3	1.2	1	0	0	1	1	1	1	Immunity	protein	18
Ferritin	PF00210.19	gi|297621162|ref|YP_003709299.1|	-	5.9e-24	84.4	6.2	7.1e-24	84.1	4.3	1.0	1	0	0	1	1	1	1	Ferritin-like	domain
Ded_cyto	PF06920.8	gi|297621162|ref|YP_003709299.1|	-	0.0072	15.6	2.3	0.35	10.1	0.1	2.1	1	1	1	2	2	2	2	Dedicator	of	cytokinesis
RE_Eco47II	PF09553.5	gi|297621162|ref|YP_003709299.1|	-	0.032	13.3	1.0	0.039	13.0	0.7	1.2	1	0	0	1	1	1	0	Eco47II	restriction	endonuclease
Streptin-Immun	PF11083.3	gi|297621162|ref|YP_003709299.1|	-	0.034	14.1	2.5	0.061	13.3	1.5	1.6	1	1	0	1	1	1	0	Lantibiotic	streptin	immunity	protein
DUF87	PF01935.12	gi|297621162|ref|YP_003709299.1|	-	0.058	13.2	2.0	0.069	12.9	1.4	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
TBPIP	PF07106.8	gi|297621162|ref|YP_003709299.1|	-	0.19	11.2	5.1	0.28	10.7	3.5	1.3	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
bZIP_1	PF00170.16	gi|297621162|ref|YP_003709299.1|	-	0.21	11.5	0.9	9.7	6.2	0.0	2.6	2	0	0	2	2	2	0	bZIP	transcription	factor
Sigma70_r1_1	PF03979.9	gi|297621162|ref|YP_003709299.1|	-	0.4	10.6	4.1	1.9	8.4	1.2	2.2	2	0	0	2	2	2	0	Sigma-70	factor,	region	1.1
PhoU	PF01895.14	gi|297621162|ref|YP_003709299.1|	-	0.92	9.9	6.9	3.9	7.9	3.5	2.4	2	1	0	2	2	2	0	PhoU	domain
Dna2	PF08696.6	gi|297621162|ref|YP_003709299.1|	-	0.93	8.7	5.0	1.3	8.2	3.5	1.1	1	0	0	1	1	1	0	DNA	replication	factor	Dna2
Flu_NS2	PF00601.14	gi|297621162|ref|YP_003709299.1|	-	0.99	9.6	6.1	1	9.6	0.9	2.4	2	1	1	3	3	3	0	Influenza	non-structural	protein	(NS2)
DUF4404	PF14357.1	gi|297621162|ref|YP_003709299.1|	-	1.7	9.0	5.9	0.49	10.8	1.3	2.1	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF4404)
Methyltransf_23	PF13489.1	gi|297621163|ref|YP_003709300.1|	-	4.4e-07	29.7	0.0	7.5e-07	29.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297621163|ref|YP_003709300.1|	-	0.0016	18.8	0.0	0.0031	17.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
ParBc	PF02195.13	gi|297621163|ref|YP_003709300.1|	-	0.0026	17.8	0.0	0.0051	16.8	0.0	1.5	1	0	0	1	1	1	1	ParB-like	nuclease	domain
Methyltransf_9	PF08003.6	gi|297621163|ref|YP_003709300.1|	-	0.014	14.1	0.3	0.038	12.6	0.0	1.7	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1698)
Methyltransf_31	PF13847.1	gi|297621163|ref|YP_003709300.1|	-	0.024	14.2	0.0	0.042	13.4	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
MecA_N	PF05223.6	gi|297621163|ref|YP_003709300.1|	-	0.039	14.0	0.0	0.066	13.2	0.0	1.3	1	0	0	1	1	1	0	NTF2-like	N-terminal	transpeptidase	domain
Methyltransf_23	PF13489.1	gi|297621164|ref|YP_003709301.1|	-	3.5e-10	39.8	0.0	5.4e-10	39.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297621164|ref|YP_003709301.1|	-	5.3e-10	39.6	0.0	9e-10	38.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297621164|ref|YP_003709301.1|	-	0.00015	21.3	0.0	0.00032	20.3	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297621164|ref|YP_003709301.1|	-	0.0002	21.6	0.0	0.0004	20.6	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|297621164|ref|YP_003709301.1|	-	0.00036	19.7	0.0	0.00054	19.1	0.0	1.3	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_18	PF12847.2	gi|297621164|ref|YP_003709301.1|	-	0.0027	18.2	0.0	0.011	16.2	0.0	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|297621164|ref|YP_003709301.1|	-	0.029	14.0	0.0	0.058	13.0	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Asn_synthase	PF00733.16	gi|297621165|ref|YP_003709302.1|	-	1e-39	136.5	0.0	1.6e-39	135.9	0.0	1.3	1	0	0	1	1	1	1	Asparagine	synthase
GATase_7	PF13537.1	gi|297621165|ref|YP_003709302.1|	-	3.3e-22	78.5	0.0	6.8e-22	77.5	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.1	gi|297621165|ref|YP_003709302.1|	-	1.8e-15	57.0	0.0	5.6e-15	55.4	0.0	1.8	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
DUF3700	PF12481.3	gi|297621165|ref|YP_003709302.1|	-	3.5e-08	32.9	0.0	6.5e-08	32.0	0.0	1.4	1	0	0	1	1	1	1	Aluminium	induced	protein
GATase_2	PF00310.16	gi|297621165|ref|YP_003709302.1|	-	0.015	14.0	0.0	0.023	13.4	0.0	1.2	1	0	0	1	1	1	0	Glutamine	amidotransferases	class-II
NAD_synthase	PF02540.12	gi|297621165|ref|YP_003709302.1|	-	0.036	12.9	0.0	0.062	12.1	0.0	1.4	1	0	0	1	1	1	0	NAD	synthase
LexA_DNA_bind	PF01726.11	gi|297621165|ref|YP_003709302.1|	-	0.14	11.6	0.3	0.55	9.8	0.0	2.1	3	0	0	3	3	3	0	LexA	DNA	binding	domain
DUF796	PF05638.7	gi|297621166|ref|YP_003709303.1|	-	1.5e-12	47.7	0.0	2.1e-12	47.2	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF796)
PPTA	PF01239.17	gi|297621166|ref|YP_003709303.1|	-	0.42	10.0	3.9	0.53	9.7	0.7	2.4	2	0	0	2	2	2	0	Protein	prenyltransferase	alpha	subunit	repeat
Lactamase_B	PF00753.22	gi|297621167|ref|YP_003709304.1|	-	5.1e-21	75.2	3.9	6.5e-21	74.8	2.7	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Legionella_OMP	PF05150.7	gi|297621168|ref|YP_003709305.1|	-	0.0076	15.4	8.5	0.02	14.0	5.7	1.7	1	1	0	1	1	1	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
FliE	PF02049.13	gi|297621171|ref|YP_003709308.1|	-	0.094	12.7	0.5	0.2	11.6	0.3	1.6	1	0	0	1	1	1	0	Flagellar	hook-basal	body	complex	protein	FliE
LON	PF02190.11	gi|297621172|ref|YP_003709309.1|	-	0.061	12.9	2.4	4.1	7.0	0.1	2.1	2	0	0	2	2	2	0	ATP-dependent	protease	La	(LON)	domain
RHS_repeat	PF05593.9	gi|297621173|ref|YP_003709310.1|	-	1.6e-33	114.1	43.0	0.0021	18.1	0.0	20.5	18	4	4	22	22	22	12	RHS	Repeat
His_Phos_1	PF00300.17	gi|297621174|ref|YP_003709311.1|	-	2.9e-11	43.7	0.0	4.1e-10	39.9	0.0	1.9	1	1	1	2	2	2	1	Histidine	phosphatase	superfamily	(branch	1)
Arg_repressor	PF01316.16	gi|297621174|ref|YP_003709311.1|	-	0.053	13.0	0.0	0.11	12.0	0.0	1.5	1	0	0	1	1	1	0	Arginine	repressor,	DNA	binding	domain
adh_short	PF00106.20	gi|297621175|ref|YP_003709312.1|	-	1.7e-29	102.8	0.3	7.4e-29	100.8	0.2	1.9	1	1	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|297621175|ref|YP_003709312.1|	-	2.7e-14	53.5	0.0	3.6e-14	53.1	0.0	1.2	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|297621175|ref|YP_003709312.1|	-	3.8e-11	42.9	0.2	7.1e-10	38.8	0.2	2.1	1	1	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|297621175|ref|YP_003709312.1|	-	3.7e-09	36.8	0.0	7.7e-09	35.8	0.0	1.5	1	1	0	1	1	1	1	NADH(P)-binding
DUF1776	PF08643.5	gi|297621175|ref|YP_003709312.1|	-	4.5e-09	35.8	0.0	3.6e-07	29.6	0.0	2.1	1	1	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
Epimerase	PF01370.16	gi|297621175|ref|YP_003709312.1|	-	1.4e-06	27.9	0.0	2.5e-06	27.1	0.0	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|297621175|ref|YP_003709312.1|	-	0.0013	17.6	0.0	0.0022	16.9	0.0	1.3	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
ApbA	PF02558.11	gi|297621175|ref|YP_003709312.1|	-	0.0063	15.9	0.0	0.01	15.2	0.0	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
AAT	PF03417.11	gi|297621175|ref|YP_003709312.1|	-	0.13	11.6	0.0	0.2	11.0	0.0	1.2	1	0	0	1	1	1	0	Acyl-coenzyme	A:6-aminopenicillanic	acid	acyl-transferase
Abi	PF02517.11	gi|297621176|ref|YP_003709313.1|	-	4.8e-21	74.6	7.8	4.8e-21	74.6	5.4	2.1	2	0	0	2	2	2	1	CAAX	protease	self-immunity
PP2C_2	PF13672.1	gi|297621177|ref|YP_003709314.1|	-	2.3e-21	76.1	0.0	3.2e-21	75.7	0.0	1.1	1	0	0	1	1	1	1	Protein	phosphatase	2C
PP2C	PF00481.16	gi|297621177|ref|YP_003709314.1|	-	2.4e-18	66.4	0.1	3.4e-18	65.9	0.1	1.2	1	0	0	1	1	1	1	Protein	phosphatase	2C
SpoIIE	PF07228.7	gi|297621177|ref|YP_003709314.1|	-	2.8e-09	36.9	0.0	2.9e-08	33.6	0.0	2.0	1	1	0	1	1	1	1	Stage	II	sporulation	protein	E	(SpoIIE)
Aminotran_5	PF00266.14	gi|297621178|ref|YP_003709315.1|	-	1.3e-63	215.0	0.0	1.7e-63	214.5	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|297621178|ref|YP_003709315.1|	-	6.6e-07	28.6	0.0	6.5e-06	25.3	0.0	2.1	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|297621178|ref|YP_003709315.1|	-	0.00018	20.7	0.0	0.00038	19.6	0.0	1.4	1	1	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.15	gi|297621178|ref|YP_003709315.1|	-	0.00021	19.6	0.1	0.00031	19.1	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.12	gi|297621178|ref|YP_003709315.1|	-	0.042	12.9	0.0	0.063	12.3	0.0	1.3	1	0	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
DUF21	PF01595.15	gi|297621179|ref|YP_003709316.1|	-	1.7e-33	115.4	1.1	2.5e-33	114.9	0.8	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF21
CBS	PF00571.23	gi|297621179|ref|YP_003709316.1|	-	1.4e-10	40.8	0.0	8.6e-09	35.0	0.0	2.9	2	0	0	2	2	2	1	CBS	domain
CorC_HlyC	PF03471.12	gi|297621179|ref|YP_003709316.1|	-	5.8e-07	29.2	0.1	1.3e-06	28.1	0.1	1.6	1	0	0	1	1	1	1	Transporter	associated	domain
BicD	PF09730.4	gi|297621179|ref|YP_003709316.1|	-	0.031	12.6	0.1	0.056	11.7	0.1	1.3	1	0	0	1	1	1	0	Microtubule-associated	protein	Bicaudal-D
DUF21	PF01595.15	gi|297621180|ref|YP_003709317.1|	-	9.2e-37	126.0	1.1	1.4e-36	125.5	0.8	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF21
CorC_HlyC	PF03471.12	gi|297621180|ref|YP_003709317.1|	-	5.8e-15	54.8	0.0	2.9e-14	52.5	0.0	2.0	1	1	0	2	2	2	1	Transporter	associated	domain
CBS	PF00571.23	gi|297621180|ref|YP_003709317.1|	-	6e-10	38.7	0.1	4.7e-05	23.0	0.0	2.5	2	0	0	2	2	2	2	CBS	domain
FtsL	PF04999.8	gi|297621181|ref|YP_003709318.1|	-	0.071	12.8	0.2	0.087	12.5	0.1	1.3	1	0	0	1	1	1	0	Cell	division	protein	FtsL
CSTF_C	PF14304.1	gi|297621181|ref|YP_003709318.1|	-	0.086	12.1	1.4	0.32	10.2	0.6	2.0	2	0	0	2	2	2	0	Transcription	termination	and	cleavage	factor	C-terminal
ATG22	PF11700.3	gi|297621181|ref|YP_003709318.1|	-	0.13	10.7	0.1	0.17	10.3	0.1	1.1	1	0	0	1	1	1	0	Vacuole	effluxer	Atg22	like
NUDIX	PF00293.23	gi|297621182|ref|YP_003709319.1|	-	2e-18	66.3	0.0	4.7e-18	65.1	0.0	1.6	1	1	1	2	2	2	1	NUDIX	domain
YgbA_NO	PF11756.3	gi|297621182|ref|YP_003709319.1|	-	0.006	16.6	0.1	0.0099	15.8	0.0	1.3	1	0	0	1	1	1	1	Nitrous	oxide-stimulated	promoter
NUDIX_2	PF13869.1	gi|297621182|ref|YP_003709319.1|	-	0.079	12.2	0.0	0.1	11.9	0.0	1.2	1	0	0	1	1	1	0	Nucleotide	hydrolase
Peptidase_M16_C	PF05193.16	gi|297621183|ref|YP_003709320.1|	-	2.3e-14	53.5	0.0	5.2e-14	52.3	0.0	1.6	1	0	0	1	1	1	1	Peptidase	M16	inactive	domain
DUF603	PF04645.7	gi|297621184|ref|YP_003709321.1|	-	0.15	11.9	2.9	0.19	11.6	0.9	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF603
Retrotrans_gag	PF03732.12	gi|297621184|ref|YP_003709321.1|	-	0.18	11.8	1.6	3.6	7.7	0.0	2.7	2	0	0	2	2	2	0	Retrotransposon	gag	protein
4HB_MCP_1	PF12729.2	gi|297621184|ref|YP_003709321.1|	-	0.45	9.8	6.2	0.9	8.8	1.5	2.8	3	0	0	3	3	3	0	Four	helix	bundle	sensory	module	for	signal	transduction
Spc7	PF08317.6	gi|297621184|ref|YP_003709321.1|	-	0.53	8.8	7.4	0.058	12.0	1.3	2.1	3	0	0	3	3	3	0	Spc7	kinetochore	protein
LMP	PF04778.7	gi|297621184|ref|YP_003709321.1|	-	3.8	7.2	8.6	0.44	10.2	1.7	2.4	3	0	0	3	3	3	0	LMP	repeated	region
TBPIP	PF07106.8	gi|297621184|ref|YP_003709321.1|	-	4.9	6.6	12.4	6.3	6.3	1.0	3.4	4	0	0	4	4	4	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
TMPIT	PF07851.8	gi|297621185|ref|YP_003709322.1|	-	0.0073	15.4	6.4	0.0073	15.4	4.4	7.0	1	1	5	7	7	7	2	TMPIT-like	protein
LysM	PF01476.15	gi|297621185|ref|YP_003709322.1|	-	0.013	15.3	0.2	0.058	13.2	0.1	2.3	1	0	0	1	1	1	0	LysM	domain
AAA_13	PF13166.1	gi|297621185|ref|YP_003709322.1|	-	0.083	11.3	116.4	0.005	15.3	20.4	4.1	1	1	3	4	4	4	0	AAA	domain
Reo_sigmaC	PF04582.7	gi|297621185|ref|YP_003709322.1|	-	2.2	7.3	47.2	3	6.9	7.6	6.1	1	1	5	6	6	6	0	Reovirus	sigma	C	capsid	protein
Thioredox_DsbH	PF03190.10	gi|297621186|ref|YP_003709323.1|	-	3.6e-70	234.8	0.0	6.1e-70	234.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin_7	PF13899.1	gi|297621186|ref|YP_003709323.1|	-	8e-11	41.8	0.0	2.1e-10	40.4	0.0	1.8	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|297621186|ref|YP_003709323.1|	-	0.0014	18.8	0.0	0.0052	16.9	0.0	1.9	2	0	0	2	2	2	1	Thioredoxin-like	domain
Hydrolase_4	PF12146.3	gi|297621186|ref|YP_003709323.1|	-	0.031	14.1	0.9	2.8	7.8	0.0	3.2	3	0	0	3	3	3	0	Putative	lysophospholipase
PAD_porph	PF04371.10	gi|297621186|ref|YP_003709323.1|	-	0.088	11.8	0.0	0.16	11.0	0.0	1.3	1	0	0	1	1	1	0	Porphyromonas-type	peptidyl-arginine	deiminase
DASH_Spc34	PF08657.5	gi|297621186|ref|YP_003709323.1|	-	0.1	12.2	2.0	0.12	12.0	0.2	1.8	2	0	0	2	2	2	0	DASH	complex	subunit	Spc34
TPR_11	PF13414.1	gi|297621187|ref|YP_003709324.1|	-	9.5e-25	86.0	18.1	6.4e-05	22.5	0.0	11.6	3	2	10	13	13	13	8	TPR	repeat
TPR_12	PF13424.1	gi|297621187|ref|YP_003709324.1|	-	1e-19	70.2	17.3	3.2e-05	23.7	0.1	7.6	5	2	1	6	6	6	4	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|297621187|ref|YP_003709324.1|	-	1.3e-18	65.5	3.1	0.02	15.0	0.0	12.2	13	0	0	13	13	12	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297621187|ref|YP_003709324.1|	-	4.4e-14	52.7	6.3	0.0005	20.6	0.0	7.6	4	2	5	9	9	9	2	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|297621187|ref|YP_003709324.1|	-	2.9e-10	40.3	4.3	0.087	13.1	0.0	7.5	5	2	3	8	8	8	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|297621187|ref|YP_003709324.1|	-	3e-08	33.5	2.7	2.2	9.1	0.0	9.0	6	3	5	11	11	11	1	Tetratricopeptide	repeat
TOM20_plant	PF06552.7	gi|297621187|ref|YP_003709324.1|	-	1.6e-05	24.6	3.1	0.02	14.4	0.0	4.7	4	2	2	6	6	6	1	Plant	specific	mitochondrial	import	receptor	subunit	TOM20
TPR_2	PF07719.12	gi|297621187|ref|YP_003709324.1|	-	0.0011	18.7	39.1	4.7	7.3	0.1	13.3	13	3	2	15	15	15	1	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297621187|ref|YP_003709324.1|	-	0.0024	17.5	25.6	0.065	13.0	0.0	9.1	10	1	0	10	10	10	1	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|297621187|ref|YP_003709324.1|	-	0.0092	14.7	0.0	0.02	13.6	0.0	1.5	1	0	0	1	1	1	1	NMDA	receptor-regulated	protein	1
TPR_10	PF13374.1	gi|297621187|ref|YP_003709324.1|	-	0.059	13.3	5.7	32	4.6	0.0	5.7	6	0	0	6	6	6	0	Tetratricopeptide	repeat
Sel1	PF08238.7	gi|297621187|ref|YP_003709324.1|	-	0.55	10.9	11.0	8	7.2	0.1	5.4	5	0	0	5	5	5	0	Sel1	repeat
TPR_1	PF00515.23	gi|297621187|ref|YP_003709324.1|	-	1.1	8.9	0.0	1.1	8.9	0.0	11.6	13	2	1	14	14	14	0	Tetratricopeptide	repeat
MgtE	PF01769.11	gi|297621188|ref|YP_003709325.1|	-	1.6e-29	102.8	3.5	3.4e-29	101.8	2.4	1.6	1	0	0	1	1	1	1	Divalent	cation	transporter
CBS	PF00571.23	gi|297621188|ref|YP_003709325.1|	-	1.1e-19	69.8	1.3	2.3e-11	43.2	0.6	2.5	2	0	0	2	2	2	2	CBS	domain
MgtE_N	PF03448.12	gi|297621188|ref|YP_003709325.1|	-	2.4e-16	59.8	3.0	3.3e-16	59.4	0.6	2.2	2	0	0	2	2	2	1	MgtE	intracellular	N	domain
DUF3783	PF12646.2	gi|297621188|ref|YP_003709325.1|	-	0.071	12.8	0.5	4.5	7.1	0.1	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3783)
FlaG	PF03646.10	gi|297621188|ref|YP_003709325.1|	-	0.073	13.2	1.1	0.35	11.0	0.1	2.3	2	0	0	2	2	2	0	FlaG	protein
DOT1	PF08123.8	gi|297621189|ref|YP_003709326.1|	-	3.7e-07	29.6	0.0	5.6e-07	29.0	0.0	1.4	1	1	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_18	PF12847.2	gi|297621189|ref|YP_003709326.1|	-	8.4e-06	26.3	0.0	1.2e-05	25.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297621189|ref|YP_003709326.1|	-	0.0003	20.4	0.0	0.00042	19.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297621189|ref|YP_003709326.1|	-	0.0023	18.2	0.0	0.0039	17.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|297621189|ref|YP_003709326.1|	-	0.003	16.6	0.0	0.0038	16.2	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_11	PF08241.7	gi|297621189|ref|YP_003709326.1|	-	0.0061	17.0	0.0	0.015	15.8	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297621189|ref|YP_003709326.1|	-	0.021	14.8	0.0	0.027	14.5	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297621189|ref|YP_003709326.1|	-	0.084	13.3	0.0	0.19	12.2	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
Raffinose_syn	PF05691.7	gi|297621191|ref|YP_003709328.1|	-	0.0044	14.6	0.0	0.0056	14.2	0.0	1.1	1	0	0	1	1	1	1	Raffinose	synthase	or	seed	imbibition	protein	Sip1
TPR_3	PF07720.7	gi|297621192|ref|YP_003709329.1|	-	3.2e-13	49.1	3.6	3.5e-06	26.6	0.0	2.9	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|297621192|ref|YP_003709329.1|	-	4.3e-12	45.4	1.7	1.2e-06	28.0	0.1	2.2	1	1	1	2	2	2	2	TPR	repeat
Apc3	PF12895.2	gi|297621192|ref|YP_003709329.1|	-	1.1e-08	35.0	0.2	4.5e-06	26.7	0.0	2.2	1	1	1	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_2	PF07719.12	gi|297621192|ref|YP_003709329.1|	-	8.1e-07	28.4	4.2	0.016	15.0	0.0	3.5	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297621192|ref|YP_003709329.1|	-	2.2e-06	28.1	0.7	0.00095	19.7	0.4	2.5	1	1	2	3	3	3	2	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|297621192|ref|YP_003709329.1|	-	1.6e-05	25.1	0.0	2.9e-05	24.2	0.0	1.5	1	1	0	1	1	1	1	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|297621192|ref|YP_003709329.1|	-	8.9e-05	21.9	3.3	0.023	14.2	0.0	3.3	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297621192|ref|YP_003709329.1|	-	0.00028	20.7	1.1	0.12	12.3	0.1	3.1	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|297621192|ref|YP_003709329.1|	-	0.003	18.0	1.0	0.16	12.6	0.2	3.1	2	1	1	3	3	3	1	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|297621192|ref|YP_003709329.1|	-	0.36	11.3	2.8	4.9	7.8	0.0	3.4	5	0	0	5	5	5	0	Tetratricopeptide	repeat
MutS_III	PF05192.13	gi|297621193|ref|YP_003709330.1|	-	0.038	13.7	3.1	0.048	13.4	2.1	1.1	1	0	0	1	1	1	0	MutS	domain	III
HrpA_pilin	PF09589.5	gi|297621193|ref|YP_003709330.1|	-	0.12	12.8	2.0	0.12	12.7	0.6	1.7	1	1	1	2	2	2	0	HrpA	pilus	formation	protein
Imm3	PF14425.1	gi|297621193|ref|YP_003709330.1|	-	0.12	12.3	4.3	1.7	8.5	0.5	2.3	2	0	0	2	2	2	0	Immunity	protein	Imm3
RNB	PF00773.14	gi|297621193|ref|YP_003709330.1|	-	0.13	11.4	4.3	0.15	11.3	3.0	1.2	1	0	0	1	1	1	0	RNB	domain
ISG65-75	PF11727.3	gi|297621193|ref|YP_003709330.1|	-	0.16	10.9	9.1	0.17	10.8	5.7	1.4	1	1	0	1	1	1	0	Invariant	surface	glycoprotein
DUF533	PF04391.7	gi|297621193|ref|YP_003709330.1|	-	0.29	10.4	5.1	0.1	11.9	1.1	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF533)
Cep57_MT_bd	PF06657.8	gi|297621193|ref|YP_003709330.1|	-	0.41	10.6	7.2	0.54	10.2	0.2	2.7	1	1	1	2	2	2	0	Centrosome	microtubule-binding	domain	of	Cep57
Nup88	PF10168.4	gi|297621193|ref|YP_003709330.1|	-	0.99	7.1	12.3	1.6	6.4	8.5	1.3	1	1	0	1	1	1	0	Nuclear	pore	component
VPS11_C	PF12451.3	gi|297621193|ref|YP_003709330.1|	-	1.2	9.0	5.2	0.21	11.4	0.3	2.2	3	1	0	3	3	3	0	Vacuolar	protein	sorting	protein	11	C	terminal
Mt_ATP-synt_B	PF05405.9	gi|297621193|ref|YP_003709330.1|	-	1.5	8.3	9.3	2.1	7.8	6.4	1.2	1	0	0	1	1	1	0	Mitochondrial	ATP	synthase	B	chain	precursor	(ATP-synt_B)
TMPIT	PF07851.8	gi|297621193|ref|YP_003709330.1|	-	1.6	7.6	7.6	2	7.3	5.3	1.2	1	0	0	1	1	1	0	TMPIT-like	protein
DUF2458	PF10454.4	gi|297621193|ref|YP_003709330.1|	-	1.7	8.4	13.1	0.88	9.4	4.4	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2458)
DUF2203	PF09969.4	gi|297621193|ref|YP_003709330.1|	-	1.8	8.8	9.5	2.1	8.5	2.3	2.2	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2203)
DUF1759	PF03564.10	gi|297621193|ref|YP_003709330.1|	-	2.5	7.8	8.1	0.68	9.7	2.1	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1759)
DUF4319	PF14203.1	gi|297621193|ref|YP_003709330.1|	-	4	7.0	7.5	1.4	8.5	1.0	2.6	2	2	0	2	2	2	0	Domain	of	unknown	function	(DUF4319)
VSG_B	PF13206.1	gi|297621193|ref|YP_003709330.1|	-	4.1	6.4	7.2	5	6.1	5.0	1.1	1	0	0	1	1	1	0	Trypanosomal	VSG	domain
PRD	PF00874.15	gi|297621193|ref|YP_003709330.1|	-	5.7	7.1	8.6	5.9	7.0	0.4	2.4	1	1	0	2	2	2	0	PRD	domain
V_ATPase_I	PF01496.14	gi|297621193|ref|YP_003709330.1|	-	6.2	4.5	10.6	9.9	3.8	7.3	1.3	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
SNF	PF00209.13	gi|297621194|ref|YP_003709331.1|	-	3.4e-68	230.3	33.4	8.8e-41	139.9	11.5	2.1	2	0	0	2	2	2	2	Sodium:neurotransmitter	symporter	family
RuvB_N	PF05496.7	gi|297621195|ref|YP_003709332.1|	-	2e-101	337.9	0.0	2.8e-101	337.4	0.0	1.2	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
RuvB_C	PF05491.8	gi|297621195|ref|YP_003709332.1|	-	1.9e-30	104.3	0.3	3.9e-30	103.2	0.2	1.6	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	C-terminus
AAA	PF00004.24	gi|297621195|ref|YP_003709332.1|	-	1.8e-17	63.7	0.0	1.7e-16	60.6	0.0	2.2	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|297621195|ref|YP_003709332.1|	-	3.3e-07	30.1	0.3	3.1e-05	23.7	0.2	2.3	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|297621195|ref|YP_003709332.1|	-	4e-05	22.8	0.0	0.03	13.4	0.0	2.3	1	1	1	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_22	PF13401.1	gi|297621195|ref|YP_003709332.1|	-	5e-05	23.4	0.8	0.04	14.0	0.0	2.7	2	1	0	3	3	3	1	AAA	domain
AAA_17	PF13207.1	gi|297621195|ref|YP_003709332.1|	-	5.6e-05	23.9	0.1	0.00013	22.8	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297621195|ref|YP_003709332.1|	-	6.2e-05	23.0	0.1	0.001	19.0	0.0	2.2	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|297621195|ref|YP_003709332.1|	-	0.00037	20.7	0.0	0.00086	19.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|297621195|ref|YP_003709332.1|	-	0.0014	18.3	0.2	0.0028	17.3	0.2	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
Sigma54_activ_2	PF14532.1	gi|297621195|ref|YP_003709332.1|	-	0.003	17.6	0.0	0.0051	16.8	0.0	1.4	1	0	0	1	1	1	1	Sigma-54	interaction	domain
AAA_28	PF13521.1	gi|297621195|ref|YP_003709332.1|	-	0.0038	17.2	0.1	0.0074	16.2	0.1	1.5	1	0	0	1	1	1	1	AAA	domain
Sigma54_activat	PF00158.21	gi|297621195|ref|YP_003709332.1|	-	0.0045	16.4	0.0	3.1	7.2	0.0	2.3	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_3	PF07726.6	gi|297621195|ref|YP_003709332.1|	-	0.0062	16.1	0.0	0.034	13.7	0.0	2.1	1	1	1	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|297621195|ref|YP_003709332.1|	-	0.0076	16.1	0.0	0.027	14.3	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
TIP49	PF06068.8	gi|297621195|ref|YP_003709332.1|	-	0.0088	14.7	0.0	0.19	10.4	0.0	2.1	2	0	0	2	2	2	1	TIP49	C-terminus
RNA_helicase	PF00910.17	gi|297621195|ref|YP_003709332.1|	-	0.011	15.8	0.0	0.026	14.7	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
AAA_33	PF13671.1	gi|297621195|ref|YP_003709332.1|	-	0.013	15.3	0.0	0.026	14.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Rad17	PF03215.10	gi|297621195|ref|YP_003709332.1|	-	0.015	13.9	0.0	0.021	13.5	0.0	1.2	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
AAA_10	PF12846.2	gi|297621195|ref|YP_003709332.1|	-	0.022	14.1	0.4	0.085	12.2	0.3	2.2	1	1	0	1	1	1	0	AAA-like	domain
NTPase_1	PF03266.10	gi|297621195|ref|YP_003709332.1|	-	0.042	13.5	0.4	0.12	12.0	0.1	1.9	2	0	0	2	2	2	0	NTPase
AAA_25	PF13481.1	gi|297621195|ref|YP_003709332.1|	-	0.077	12.3	0.0	0.14	11.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|297621195|ref|YP_003709332.1|	-	0.087	12.2	0.3	0.27	10.6	0.0	2.0	3	0	0	3	3	3	0	IstB-like	ATP	binding	protein
DUF258	PF03193.11	gi|297621195|ref|YP_003709332.1|	-	0.14	11.3	0.0	0.26	10.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
SpoIID	PF08486.5	gi|297621196|ref|YP_003709333.1|	-	2.2e-09	37.4	0.0	3.6e-09	36.7	0.0	1.3	1	0	0	1	1	1	1	Stage	II	sporulation	protein
Queuosine_synth	PF02547.10	gi|297621197|ref|YP_003709334.1|	-	2.9e-134	447.1	0.0	3.2e-134	446.9	0.0	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein
CesT	PF05932.8	gi|297621198|ref|YP_003709335.1|	-	1.3e-25	89.5	0.0	1.5e-25	89.3	0.0	1.0	1	0	0	1	1	1	1	Tir	chaperone	protein	(CesT)	family
Lipoprotein_1	PF00820.14	gi|297621198|ref|YP_003709335.1|	-	0.17	10.9	0.0	0.22	10.5	0.0	1.1	1	0	0	1	1	1	0	Borrelia	lipoprotein
TPR_7	PF13176.1	gi|297621199|ref|YP_003709336.1|	-	0.0004	19.9	0.6	0.0087	15.7	0.0	3.0	2	0	0	2	2	2	1	Tetratricopeptide	repeat
Peptidase_M32	PF02074.10	gi|297621199|ref|YP_003709336.1|	-	0.013	14.1	6.5	0.018	13.7	4.5	1.1	1	0	0	1	1	1	0	Carboxypeptidase	Taq	(M32)	metallopeptidase
TPR_6	PF13174.1	gi|297621199|ref|YP_003709336.1|	-	0.025	15.0	0.8	20	5.9	0.0	3.0	2	0	0	2	2	2	0	Tetratricopeptide	repeat
IL5	PF02025.10	gi|297621199|ref|YP_003709336.1|	-	0.037	14.0	0.4	0.13	12.2	0.0	2.0	2	0	0	2	2	2	0	Interleukin	5
AIF_C	PF14721.1	gi|297621199|ref|YP_003709336.1|	-	0.043	14.0	2.7	0.099	12.8	1.9	1.6	1	0	0	1	1	1	0	Apoptosis-inducing	factor,	mitochondrion-associated,	C-term
TPR_12	PF13424.1	gi|297621199|ref|YP_003709336.1|	-	0.044	13.7	1.3	0.3	11.0	0.0	2.5	3	0	0	3	3	2	0	Tetratricopeptide	repeat
MtrB	PF05440.7	gi|297621199|ref|YP_003709336.1|	-	0.1	12.6	1.0	1.1	9.2	0.0	2.7	1	1	1	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase	subunit	B
TPR_8	PF13181.1	gi|297621199|ref|YP_003709336.1|	-	0.12	12.2	3.2	2.9	7.8	0.0	2.8	2	0	0	2	2	2	0	Tetratricopeptide	repeat
GreA_GreB_N	PF03449.10	gi|297621199|ref|YP_003709336.1|	-	1	9.4	12.2	19	5.4	7.2	3.3	2	1	1	3	3	2	0	Transcription	elongation	factor,	N-terminal
ATP-synt_D	PF01813.12	gi|297621199|ref|YP_003709336.1|	-	1.4	8.4	10.9	1.7	8.1	4.7	2.9	3	1	0	3	3	3	0	ATP	synthase	subunit	D
Terminase_2	PF03592.11	gi|297621199|ref|YP_003709336.1|	-	3.4	7.9	12.6	6.3	7.0	8.1	2.0	1	1	0	1	1	1	0	Terminase	small	subunit
DUF2681	PF10883.3	gi|297621199|ref|YP_003709336.1|	-	4.4	7.5	19.2	1.1	9.4	8.0	3.3	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2681)
cwf21	PF08312.7	gi|297621199|ref|YP_003709336.1|	-	7.5	6.4	9.7	2.8	7.8	1.1	3.4	3	1	0	3	3	3	0	cwf21	domain
CHASE3	PF05227.8	gi|297621199|ref|YP_003709336.1|	-	8	6.1	11.1	10	5.8	5.1	2.5	1	1	1	2	2	2	0	CHASE3	domain
Acetyltransf_11	PF13720.1	gi|297621199|ref|YP_003709336.1|	-	9.4	6.5	7.2	36	4.6	0.5	3.3	2	1	1	3	3	3	0	Udp	N-acetylglucosamine	O-acyltransferase;	Domain	2
SSB	PF00436.20	gi|297621200|ref|YP_003709337.1|	-	8.1e-21	73.8	0.2	1.3e-20	73.2	0.1	1.4	1	1	0	1	1	1	1	Single-strand	binding	protein	family
Peptidase_M17	PF00883.16	gi|297621201|ref|YP_003709338.1|	-	5.4e-117	390.1	2.0	8e-117	389.5	1.4	1.3	1	0	0	1	1	1	1	Cytosol	aminopeptidase	family,	catalytic	domain
Peptidase_M17_N	PF02789.12	gi|297621201|ref|YP_003709338.1|	-	1.9e-22	79.3	3.3	2e-22	79.2	0.1	2.5	3	0	0	3	3	3	1	Cytosol	aminopeptidase	family,	N-terminal	domain
Semialdhyde_dhC	PF02774.13	gi|297621202|ref|YP_003709339.1|	-	1.7e-31	109.4	0.0	4.6e-31	108.1	0.0	1.7	1	1	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Semialdhyde_dh	PF01118.19	gi|297621202|ref|YP_003709339.1|	-	4.7e-29	101.1	0.0	1e-28	100.0	0.0	1.6	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Gp_dh_C	PF02800.15	gi|297621202|ref|YP_003709339.1|	-	0.001	18.5	0.0	0.0026	17.2	0.0	1.7	1	1	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DXP_reductoisom	PF02670.11	gi|297621202|ref|YP_003709339.1|	-	0.0018	18.8	0.0	0.0058	17.1	0.0	2.0	2	0	0	2	2	2	1	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
DapB_N	PF01113.15	gi|297621202|ref|YP_003709339.1|	-	0.0095	15.8	0.0	0.017	15.0	0.0	1.5	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Saccharop_dh	PF03435.13	gi|297621202|ref|YP_003709339.1|	-	0.16	10.9	0.1	0.28	10.1	0.0	1.6	2	0	0	2	2	2	0	Saccharopine	dehydrogenase
PP2C	PF00481.16	gi|297621203|ref|YP_003709340.1|	-	1.1e-49	169.1	0.0	1.5e-49	168.6	0.0	1.2	1	0	0	1	1	1	1	Protein	phosphatase	2C
PP2C_2	PF13672.1	gi|297621203|ref|YP_003709340.1|	-	1.4e-06	27.9	0.1	3.1e-06	26.7	0.0	1.6	2	1	0	2	2	2	1	Protein	phosphatase	2C
TPR_3	PF07720.7	gi|297621203|ref|YP_003709340.1|	-	0.012	15.3	0.3	0.035	13.9	0.2	1.8	1	0	0	1	1	1	0	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|297621203|ref|YP_003709340.1|	-	0.12	12.0	3.2	0.75	9.5	0.3	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297621203|ref|YP_003709340.1|	-	0.14	12.1	0.3	1.7	8.7	0.1	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297621203|ref|YP_003709340.1|	-	0.23	11.3	2.1	0.79	9.6	0.2	2.6	2	0	0	2	2	2	0	Tetratricopeptide	repeat
NeuB	PF03102.9	gi|297621205|ref|YP_003709342.1|	-	5.2e-83	277.8	0.0	6.5e-83	277.5	0.0	1.1	1	0	0	1	1	1	1	NeuB	family
SAF	PF08666.7	gi|297621205|ref|YP_003709342.1|	-	6.5e-08	32.8	0.0	1.2e-07	31.9	0.0	1.5	1	0	0	1	1	1	1	SAF	domain
ATPgrasp_Ter	PF15632.1	gi|297621206|ref|YP_003709343.1|	-	2.2e-32	112.0	0.0	1.7e-16	59.8	0.0	2.0	2	0	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_4	PF13535.1	gi|297621206|ref|YP_003709343.1|	-	1.3e-16	60.9	0.0	2.1e-16	60.1	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|297621206|ref|YP_003709343.1|	-	8e-12	45.3	0.0	1.1e-11	44.7	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|297621206|ref|YP_003709343.1|	-	0.0073	15.6	0.0	0.03	13.6	0.0	1.9	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
YlaC	PF10777.4	gi|297621206|ref|YP_003709343.1|	-	0.028	13.9	0.0	0.16	11.5	0.0	2.2	3	0	0	3	3	3	0	Inner	membrane	protein	YlaC
DUF3301	PF11743.3	gi|297621206|ref|YP_003709343.1|	-	0.069	12.6	0.0	0.14	11.6	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3301)
Acetyltransf_4	PF13420.1	gi|297621207|ref|YP_003709344.1|	-	2e-11	44.1	0.0	2.3e-11	43.8	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|297621207|ref|YP_003709344.1|	-	0.00055	20.1	0.0	0.00077	19.6	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Epimerase	PF01370.16	gi|297621208|ref|YP_003709345.1|	-	4.5e-26	91.7	0.0	6.6e-26	91.1	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|297621208|ref|YP_003709345.1|	-	1.8e-11	43.2	0.0	4.4e-11	42.0	0.0	1.6	2	0	0	2	2	2	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.12	gi|297621208|ref|YP_003709345.1|	-	6.1e-08	31.9	0.0	1.4e-07	30.7	0.0	1.5	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_10	PF13460.1	gi|297621208|ref|YP_003709345.1|	-	0.00014	21.8	0.0	0.00029	20.9	0.0	1.7	1	1	0	1	1	1	1	NADH(P)-binding
NAD_binding_4	PF07993.7	gi|297621208|ref|YP_003709345.1|	-	0.0029	16.5	0.1	0.43	9.4	0.1	2.8	1	1	1	2	2	2	2	Male	sterility	protein
adh_short	PF00106.20	gi|297621208|ref|YP_003709345.1|	-	0.0038	17.1	0.0	0.018	14.9	0.0	2.1	3	0	0	3	3	3	1	short	chain	dehydrogenase
Polysacc_synt_2	PF02719.10	gi|297621208|ref|YP_003709345.1|	-	0.0068	15.3	0.0	0.089	11.6	0.0	2.7	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
KR	PF08659.5	gi|297621208|ref|YP_003709345.1|	-	0.029	14.0	0.0	0.076	12.6	0.0	1.7	2	0	0	2	2	2	0	KR	domain
NAD_binding_7	PF13241.1	gi|297621208|ref|YP_003709345.1|	-	0.15	12.2	0.0	3.1	8.1	0.0	2.2	2	0	0	2	2	2	0	Putative	NAD(P)-binding
DNA_pol3_delta	PF06144.8	gi|297621209|ref|YP_003709346.1|	-	4.2e-16	58.9	0.1	6.4e-16	58.3	0.0	1.3	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
AAA_22	PF13401.1	gi|297621209|ref|YP_003709346.1|	-	0.0095	16.0	0.1	0.086	12.9	0.0	2.4	3	0	0	3	3	3	1	AAA	domain
DUF3283	PF11686.3	gi|297621209|ref|YP_003709346.1|	-	0.029	14.1	0.4	12	5.7	0.3	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3283)
TP_methylase	PF00590.15	gi|297621210|ref|YP_003709347.1|	-	7.8e-18	64.9	0.0	9.6e-18	64.6	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
DUF3153	PF11353.3	gi|297621210|ref|YP_003709347.1|	-	0.03	13.7	0.1	0.04	13.3	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3153)
Beta_helix	PF13229.1	gi|297621211|ref|YP_003709348.1|	-	2.4e-06	27.4	9.9	0.0079	15.9	1.4	3.1	3	0	0	3	3	3	2	Right	handed	beta	helix	region
Radical_SAM	PF04055.16	gi|297621212|ref|YP_003709349.1|	-	1.9e-18	67.2	0.0	3.5e-18	66.3	0.0	1.5	1	0	0	1	1	1	1	Radical	SAM	superfamily
HemN_C	PF06969.11	gi|297621212|ref|YP_003709349.1|	-	2e-08	34.1	0.3	9.3e-08	32.0	0.5	2.0	2	0	0	2	2	2	1	HemN	C-terminal	domain
WASH_WAHD	PF11945.3	gi|297621213|ref|YP_003709350.1|	-	0.028	13.7	0.0	0.035	13.4	0.0	1.1	1	0	0	1	1	1	0	WAHD	domain	of	WASH	complex
Spc7	PF08317.6	gi|297621213|ref|YP_003709350.1|	-	0.071	11.7	2.7	0.087	11.4	1.9	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
Gal4_dimer	PF03902.8	gi|297621213|ref|YP_003709350.1|	-	0.083	12.8	1.4	0.18	11.7	0.3	2.0	2	0	0	2	2	2	0	Gal4-like	dimerisation	domain
DUF919	PF06034.6	gi|297621213|ref|YP_003709350.1|	-	0.25	11.0	4.9	1.7	8.3	0.3	2.2	2	0	0	2	2	2	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
DUF1342	PF07072.6	gi|297621213|ref|YP_003709350.1|	-	0.35	10.4	1.7	0.49	10.0	1.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1342)
XhlA	PF10779.4	gi|297621213|ref|YP_003709350.1|	-	1.1	9.1	4.6	0.7	9.8	1.2	1.9	2	0	0	2	2	2	0	Haemolysin	XhlA
Response_reg	PF00072.19	gi|297621214|ref|YP_003709351.1|	-	2.5e-31	107.9	0.2	2.8e-31	107.7	0.1	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
DUF4265	PF14085.1	gi|297621214|ref|YP_003709351.1|	-	0.053	13.2	0.0	0.092	12.5	0.0	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4265)
Glutaredoxin	PF00462.19	gi|297621215|ref|YP_003709352.1|	-	1.4e-11	44.1	0.0	2.2e-11	43.5	0.0	1.3	1	0	0	1	1	1	1	Glutaredoxin
GST_N_3	PF13417.1	gi|297621215|ref|YP_003709352.1|	-	1.9e-10	40.8	0.0	2.5e-10	40.4	0.0	1.1	1	0	0	1	1	1	1	Glutathione	S-transferase,	N-terminal	domain
Thioredoxin_3	PF13192.1	gi|297621215|ref|YP_003709352.1|	-	0.00032	20.4	0.0	0.00054	19.7	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_4	PF13462.1	gi|297621215|ref|YP_003709352.1|	-	0.00035	20.6	0.6	0.61	10.0	0.3	2.1	1	1	1	2	2	2	2	Thioredoxin
GST_N	PF02798.15	gi|297621215|ref|YP_003709352.1|	-	0.0019	18.3	0.0	0.0025	17.9	0.0	1.2	1	0	0	1	1	1	1	Glutathione	S-transferase,	N-terminal	domain
ArsC	PF03960.10	gi|297621215|ref|YP_003709352.1|	-	0.0023	18.0	0.1	0.0044	17.0	0.1	1.5	2	0	0	2	2	2	1	ArsC	family
GST_N_2	PF13409.1	gi|297621215|ref|YP_003709352.1|	-	0.0045	16.9	0.0	0.0058	16.5	0.0	1.3	1	1	0	1	1	1	1	Glutathione	S-transferase,	N-terminal	domain
DSBA	PF01323.15	gi|297621215|ref|YP_003709352.1|	-	0.0056	16.2	0.7	0.12	11.8	0.0	2.0	1	1	1	2	2	2	1	DSBA-like	thioredoxin	domain
Thioredoxin_2	PF13098.1	gi|297621215|ref|YP_003709352.1|	-	0.018	15.2	0.7	0.35	11.0	0.5	2.1	1	1	0	1	1	1	0	Thioredoxin-like	domain
DUF1479	PF07350.7	gi|297621215|ref|YP_003709352.1|	-	0.03	12.8	0.4	0.16	10.4	0.3	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1479)
AhpC-TSA	PF00578.16	gi|297621215|ref|YP_003709352.1|	-	0.051	13.2	0.0	0.27	10.9	0.0	1.8	1	1	1	2	2	2	0	AhpC/TSA	family
G6PD_C	PF02781.11	gi|297621215|ref|YP_003709352.1|	-	0.056	12.2	0.0	0.059	12.2	0.0	1.0	1	0	0	1	1	1	0	Glucose-6-phosphate	dehydrogenase,	C-terminal	domain
Ogr_Delta	PF04606.7	gi|297621215|ref|YP_003709352.1|	-	0.061	12.9	0.3	0.097	12.3	0.2	1.4	1	0	0	1	1	1	0	Ogr/Delta-like	zinc	finger
MS_channel	PF00924.13	gi|297621216|ref|YP_003709353.1|	-	1.2e-46	158.6	2.1	3e-46	157.3	1.5	1.7	1	0	0	1	1	1	1	Mechanosensitive	ion	channel
DUF2512	PF10710.4	gi|297621216|ref|YP_003709353.1|	-	0.005	16.2	0.3	0.005	16.2	0.2	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF2512)
GtrA	PF04138.9	gi|297621216|ref|YP_003709353.1|	-	0.23	11.4	8.8	0.49	10.3	6.1	1.5	1	0	0	1	1	1	0	GtrA-like	protein
Pyr_redox_2	PF07992.9	gi|297621217|ref|YP_003709354.1|	-	2.8e-31	108.9	0.2	3.5e-31	108.6	0.1	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|297621217|ref|YP_003709354.1|	-	1.5e-19	70.1	1.4	2.9e-17	62.8	0.1	2.9	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|297621217|ref|YP_003709354.1|	-	1.5e-10	41.4	0.0	1.3e-06	28.6	0.0	3.0	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|297621217|ref|YP_003709354.1|	-	3.9e-06	26.0	0.1	0.069	12.0	0.1	3.1	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|297621217|ref|YP_003709354.1|	-	2.2e-05	23.4	8.4	0.011	14.5	0.1	4.6	2	2	3	5	5	5	2	Glucose	inhibited	division	protein	A
FAD_binding_2	PF00890.19	gi|297621217|ref|YP_003709354.1|	-	7.9e-05	21.6	0.1	0.015	14.1	0.1	3.2	3	0	0	3	3	3	1	FAD	binding	domain
NAD_binding_7	PF13241.1	gi|297621217|ref|YP_003709354.1|	-	0.00017	21.7	0.1	0.035	14.3	0.0	2.6	2	1	0	2	2	2	1	Putative	NAD(P)-binding
FAD_oxidored	PF12831.2	gi|297621217|ref|YP_003709354.1|	-	0.00075	18.6	1.9	0.0072	15.4	0.0	2.6	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|297621217|ref|YP_003709354.1|	-	0.001	19.0	0.0	0.029	14.4	0.0	2.5	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|297621217|ref|YP_003709354.1|	-	0.0011	17.5	0.1	0.018	13.5	0.1	2.6	3	0	0	3	3	3	1	HI0933-like	protein
K_oxygenase	PF13434.1	gi|297621217|ref|YP_003709354.1|	-	0.0013	17.7	0.1	0.26	10.1	0.0	2.8	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
Shikimate_DH	PF01488.15	gi|297621217|ref|YP_003709354.1|	-	0.0018	18.3	0.5	0.076	13.1	0.0	2.5	3	0	0	3	3	2	1	Shikimate	/	quinate	5-dehydrogenase
FAD_binding_3	PF01494.14	gi|297621217|ref|YP_003709354.1|	-	0.0019	17.3	0.1	0.24	10.4	0.0	2.4	2	0	0	2	2	2	1	FAD	binding	domain
FMO-like	PF00743.14	gi|297621217|ref|YP_003709354.1|	-	0.027	12.6	0.0	0.74	7.9	0.0	2.2	2	0	0	2	2	2	0	Flavin-binding	monooxygenase-like
Thi4	PF01946.12	gi|297621217|ref|YP_003709354.1|	-	0.03	13.4	0.6	0.075	12.1	0.0	1.9	2	1	0	2	2	2	0	Thi4	family
AlaDh_PNT_C	PF01262.16	gi|297621217|ref|YP_003709354.1|	-	0.054	13.0	0.0	2	7.9	0.0	2.5	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Trp_halogenase	PF04820.9	gi|297621217|ref|YP_003709354.1|	-	0.092	11.3	0.2	0.41	9.2	0.0	2.1	3	0	0	3	3	3	0	Tryptophan	halogenase
NAD_binding_9	PF13454.1	gi|297621217|ref|YP_003709354.1|	-	0.13	12.0	1.3	33	4.2	0.1	3.1	3	0	0	3	3	3	0	FAD-NAD(P)-binding
Kelch_1	PF01344.20	gi|297621217|ref|YP_003709354.1|	-	0.13	11.7	0.0	0.37	10.3	0.0	1.7	1	0	0	1	1	1	0	Kelch	motif
Cytochrom_C_asm	PF01578.15	gi|297621219|ref|YP_003709356.1|	-	1.4e-24	86.8	16.4	5.9e-24	84.8	8.3	2.3	2	0	0	2	2	2	2	Cytochrome	C	assembly	protein
OST3_OST6	PF04756.8	gi|297621219|ref|YP_003709356.1|	-	1.1	8.7	5.7	1.3	8.5	0.6	2.8	2	0	0	2	2	2	0	OST3	/	OST6	family
Peptidase_S41	PF03572.13	gi|297621220|ref|YP_003709357.1|	-	1.5e-33	115.5	0.0	2.6e-33	114.8	0.0	1.4	1	0	0	1	1	1	1	Peptidase	family	S41
Lipase_3	PF01764.20	gi|297621222|ref|YP_003709359.1|	-	0.00017	21.2	0.0	0.00048	19.7	0.0	1.7	2	0	0	2	2	2	1	Lipase	(class	3)
ResB	PF05140.9	gi|297621223|ref|YP_003709360.1|	-	0.0012	17.4	19.8	0.0081	14.7	0.5	4.3	2	2	2	4	4	4	2	ResB-like	family
DmsC	PF04976.7	gi|297621223|ref|YP_003709360.1|	-	0.024	13.9	1.2	0.035	13.3	0.8	1.2	1	0	0	1	1	1	0	DMSO	reductase	anchor	subunit	(DmsC)
DUF373	PF04123.8	gi|297621223|ref|YP_003709360.1|	-	3.8	6.4	4.8	3.5	6.5	0.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF373)
CTP_transf_3	PF02348.14	gi|297621225|ref|YP_003709362.1|	-	1.7e-32	112.8	0.2	2e-32	112.5	0.1	1.1	1	0	0	1	1	1	1	Cytidylyltransferase
NTP_transf_3	PF12804.2	gi|297621225|ref|YP_003709362.1|	-	7.9e-12	45.5	0.0	1e-11	45.1	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|297621225|ref|YP_003709362.1|	-	0.00073	19.1	0.0	0.0011	18.5	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
DUF2064	PF09837.4	gi|297621225|ref|YP_003709362.1|	-	0.074	12.6	0.0	0.12	12.0	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2064)
DUF484	PF04340.7	gi|297621225|ref|YP_003709362.1|	-	0.12	11.8	1.4	5.1	6.4	0.1	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF484
Transket_pyr	PF02779.19	gi|297621226|ref|YP_003709363.1|	-	5.3e-59	198.6	0.0	9.4e-59	197.8	0.0	1.4	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
E1_dh	PF00676.15	gi|297621226|ref|YP_003709363.1|	-	2.3e-47	161.1	0.0	3.8e-47	160.4	0.0	1.2	1	0	0	1	1	1	1	Dehydrogenase	E1	component
2-oxoacid_dh	PF00198.18	gi|297621227|ref|YP_003709364.1|	-	1.1e-80	270.1	0.0	1.5e-80	269.7	0.0	1.1	1	0	0	1	1	1	1	2-oxoacid	dehydrogenases	acyltransferase	(catalytic	domain)
Biotin_lipoyl	PF00364.17	gi|297621227|ref|YP_003709364.1|	-	2e-13	49.7	3.1	3.9e-13	48.8	2.1	1.5	1	0	0	1	1	1	1	Biotin-requiring	enzyme
HlyD_2	PF12700.2	gi|297621227|ref|YP_003709364.1|	-	0.0028	16.8	1.3	0.015	14.4	0.4	2.2	1	1	2	3	3	3	1	HlyD	family	secretion	protein
GKAP	PF03359.8	gi|297621227|ref|YP_003709364.1|	-	0.029	14.0	2.9	0.04	13.5	2.0	1.2	1	0	0	1	1	1	0	Guanylate-kinase-associated	protein	(GKAP)	protein
DUF1441	PF07278.6	gi|297621227|ref|YP_003709364.1|	-	0.042	13.4	0.1	0.21	11.2	0.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1441)
Pyr_redox_2	PF07992.9	gi|297621228|ref|YP_003709365.1|	-	5.3e-39	134.1	8.0	2.5e-37	128.7	5.6	3.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|297621228|ref|YP_003709365.1|	-	1.6e-34	118.2	0.5	1.6e-34	118.2	0.3	2.7	3	1	1	4	4	4	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|297621228|ref|YP_003709365.1|	-	2.3e-23	82.3	6.0	1.2e-20	73.6	0.5	3.3	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|297621228|ref|YP_003709365.1|	-	9.3e-13	47.7	0.3	3.7e-09	35.9	0.0	2.4	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|297621228|ref|YP_003709365.1|	-	3e-11	43.7	0.4	1.6e-06	28.3	0.2	2.8	1	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|297621228|ref|YP_003709365.1|	-	4.2e-11	42.5	4.3	2.1e-09	36.9	0.0	2.9	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|297621228|ref|YP_003709365.1|	-	1.7e-08	34.3	3.1	3e-05	23.9	0.5	2.5	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|297621228|ref|YP_003709365.1|	-	1.8e-08	33.6	0.4	1.8e-08	33.6	0.3	2.6	2	1	1	3	3	3	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|297621228|ref|YP_003709365.1|	-	1.9e-07	29.9	11.4	1.2e-05	24.0	0.1	3.9	3	2	1	4	4	4	2	HI0933-like	protein
DAO	PF01266.19	gi|297621228|ref|YP_003709365.1|	-	1.4e-06	27.4	14.3	0.00029	19.8	0.3	3.8	4	1	0	4	4	4	3	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|297621228|ref|YP_003709365.1|	-	4.8e-06	25.8	5.5	3.1e-05	23.1	0.3	2.3	1	1	1	2	2	2	1	Thi4	family
FAD_binding_3	PF01494.14	gi|297621228|ref|YP_003709365.1|	-	3.7e-05	22.9	6.4	0.0036	16.4	0.1	2.8	2	1	1	3	3	3	2	FAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|297621228|ref|YP_003709365.1|	-	6.6e-05	22.5	4.2	0.01	15.4	0.2	3.3	3	1	1	4	4	4	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
3HCDH_N	PF02737.13	gi|297621228|ref|YP_003709365.1|	-	0.00013	21.6	2.2	0.0013	18.4	0.6	2.4	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Lycopene_cycl	PF05834.7	gi|297621228|ref|YP_003709365.1|	-	0.0015	17.4	5.8	0.017	14.0	0.1	3.0	2	1	1	3	3	3	1	Lycopene	cyclase	protein
K_oxygenase	PF13434.1	gi|297621228|ref|YP_003709365.1|	-	0.0025	16.8	0.4	0.41	9.5	0.0	2.7	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
2-Hacid_dh_C	PF02826.14	gi|297621228|ref|YP_003709365.1|	-	0.0092	15.1	1.5	0.58	9.2	0.2	3.1	2	1	1	3	3	3	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
XdhC_C	PF13478.1	gi|297621228|ref|YP_003709365.1|	-	0.03	14.6	0.1	2.2	8.5	0.0	2.4	2	0	0	2	2	2	0	XdhC	Rossmann	domain
UDPG_MGDP_dh_N	PF03721.9	gi|297621228|ref|YP_003709365.1|	-	0.37	10.1	4.3	0.92	8.8	0.7	2.7	2	1	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Fe-S_biosyn	PF01521.15	gi|297621229|ref|YP_003709366.1|	-	1.8e-12	47.1	0.0	3e-12	46.4	0.0	1.4	1	0	0	1	1	1	1	Iron-sulphur	cluster	biosynthesis
DUF1858	PF08984.6	gi|297621229|ref|YP_003709366.1|	-	3.2e-05	23.5	0.0	9.4e-05	21.9	0.0	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1858)
DNA_ligase_A_C	PF04679.10	gi|297621229|ref|YP_003709366.1|	-	0.1	13.0	0.0	0.18	12.2	0.0	1.4	1	0	0	1	1	1	0	ATP	dependent	DNA	ligase	C	terminal	region
HTH_11	PF08279.7	gi|297621229|ref|YP_003709366.1|	-	0.11	12.1	0.4	11	5.7	0.0	3.3	3	1	0	3	3	3	0	HTH	domain
DUF498	PF04430.9	gi|297621229|ref|YP_003709366.1|	-	0.13	11.8	0.0	0.46	10.0	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF498/DUF598)
DUF433	PF04255.9	gi|297621229|ref|YP_003709366.1|	-	0.14	11.6	0.1	0.91	8.9	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF433)
Fer2	PF00111.22	gi|297621230|ref|YP_003709367.1|	-	3.1e-13	49.2	3.0	3.8e-13	48.9	2.1	1.1	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
DHODB_Fe-S_bind	PF10418.4	gi|297621230|ref|YP_003709367.1|	-	0.0069	15.8	4.9	0.0085	15.5	0.3	2.5	3	0	0	3	3	3	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
NUDIX	PF00293.23	gi|297621230|ref|YP_003709367.1|	-	0.076	12.6	0.1	0.093	12.3	0.1	1.1	1	0	0	1	1	1	0	NUDIX	domain
Fer2_3	PF13085.1	gi|297621230|ref|YP_003709367.1|	-	0.41	10.4	3.3	0.84	9.4	2.3	1.7	1	1	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
RasGEF	PF00617.14	gi|297621231|ref|YP_003709368.1|	-	2.6e-31	108.8	0.9	9.5e-31	106.9	0.0	2.3	2	0	0	2	2	2	1	RasGEF	domain
RasGEF_N	PF00618.15	gi|297621231|ref|YP_003709368.1|	-	6.9	6.8	14.4	0.11	12.6	2.0	3.7	3	2	0	3	3	3	0	RasGEF	N-terminal	motif
LGT	PF01790.13	gi|297621232|ref|YP_003709369.1|	-	2.7e-57	193.6	11.7	1.1e-52	178.5	6.3	2.0	2	0	0	2	2	2	2	Prolipoprotein	diacylglyceryl	transferase
DUF1049	PF06305.6	gi|297621232|ref|YP_003709369.1|	-	0.26	10.7	0.1	0.26	10.7	0.1	3.1	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1049)
DUF3185	PF11381.3	gi|297621232|ref|YP_003709369.1|	-	0.55	10.0	4.8	3	7.6	0.1	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3185)
UPF0154	PF03672.8	gi|297621232|ref|YP_003709369.1|	-	5.4	6.7	6.2	0.74	9.4	0.2	2.7	3	0	0	3	3	3	0	Uncharacterised	protein	family	(UPF0154)
AdoHcyase	PF05221.12	gi|297621233|ref|YP_003709370.1|	-	4.3e-131	435.7	0.0	5.3e-131	435.4	0.0	1.0	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.16	gi|297621233|ref|YP_003709370.1|	-	1.3e-75	252.7	2.3	1.8e-75	252.2	1.6	1.2	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|297621233|ref|YP_003709370.1|	-	2.9e-08	33.0	0.1	4.6e-08	32.4	0.1	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|297621233|ref|YP_003709370.1|	-	1.3e-05	24.6	0.0	2.1e-05	23.9	0.0	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
THF_DHG_CYH_C	PF02882.14	gi|297621233|ref|YP_003709370.1|	-	0.0018	17.3	1.5	0.0086	15.1	1.1	1.9	1	1	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
TrkA_N	PF02254.13	gi|297621233|ref|YP_003709370.1|	-	0.0019	18.2	0.1	0.0036	17.2	0.1	1.5	1	0	0	1	1	1	1	TrkA-N	domain
AlaDh_PNT_C	PF01262.16	gi|297621233|ref|YP_003709370.1|	-	0.01	15.4	0.8	0.019	14.5	0.3	1.6	1	1	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
ELFV_dehydrog	PF00208.16	gi|297621233|ref|YP_003709370.1|	-	0.013	15.0	0.2	0.023	14.2	0.1	1.4	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
NAD_binding_7	PF13241.1	gi|297621233|ref|YP_003709370.1|	-	0.027	14.7	0.2	0.062	13.5	0.1	1.6	1	0	0	1	1	1	0	Putative	NAD(P)-binding
3HCDH_N	PF02737.13	gi|297621233|ref|YP_003709370.1|	-	0.096	12.3	0.7	0.2	11.2	0.3	1.6	1	1	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
TMEM107	PF14995.1	gi|297621233|ref|YP_003709370.1|	-	0.13	12.4	0.0	0.23	11.5	0.0	1.4	1	0	0	1	1	1	0	Transmembrane	protein
Bac_DnaA	PF00308.13	gi|297621234|ref|YP_003709371.1|	-	1.9e-54	184.6	0.2	6.7e-54	182.8	0.0	1.9	2	0	0	2	2	2	1	Bacterial	dnaA	protein
Bac_DnaA_C	PF08299.6	gi|297621234|ref|YP_003709371.1|	-	1.7e-21	75.8	0.0	4.3e-21	74.5	0.0	1.8	1	0	0	1	1	1	1	Bacterial	dnaA	protein	helix-turn-helix
IstB_IS21	PF01695.12	gi|297621234|ref|YP_003709371.1|	-	3.8e-11	42.7	0.0	7.3e-11	41.7	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA	PF00004.24	gi|297621234|ref|YP_003709371.1|	-	1.5e-05	25.1	0.0	5.9e-05	23.2	0.0	2.0	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|297621234|ref|YP_003709371.1|	-	0.00011	21.9	0.2	0.0045	16.7	0.0	3.0	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
DnaA_N	PF11638.3	gi|297621234|ref|YP_003709371.1|	-	0.00036	20.0	0.6	0.00089	18.7	0.4	1.7	1	0	0	1	1	1	1	DnaA	N-terminal	domain
Arch_ATPase	PF01637.13	gi|297621234|ref|YP_003709371.1|	-	0.00073	19.2	0.4	0.0052	16.5	0.0	2.5	2	1	2	4	4	4	1	Archaeal	ATPase
DNA_pol3_delta	PF06144.8	gi|297621234|ref|YP_003709371.1|	-	0.0043	16.5	0.1	0.011	15.2	0.1	1.8	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
AAA_16	PF13191.1	gi|297621234|ref|YP_003709371.1|	-	0.0054	16.7	0.3	0.027	14.4	0.2	2.3	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_14	PF13173.1	gi|297621234|ref|YP_003709371.1|	-	0.0055	16.6	0.0	0.016	15.1	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|297621234|ref|YP_003709371.1|	-	0.026	14.6	0.7	1.5	8.9	0.5	3.0	1	1	0	1	1	1	0	AAA	domain
Kinesin	PF00225.18	gi|297621234|ref|YP_003709371.1|	-	0.028	13.1	0.0	0.048	12.3	0.0	1.4	1	0	0	1	1	1	0	Kinesin	motor	domain
RNA_helicase	PF00910.17	gi|297621234|ref|YP_003709371.1|	-	0.045	13.9	0.1	0.76	9.9	0.0	2.8	2	1	0	2	2	2	0	RNA	helicase
NACHT	PF05729.7	gi|297621234|ref|YP_003709371.1|	-	0.05	13.2	3.2	0.41	10.2	0.1	3.3	3	1	1	4	4	4	0	NACHT	domain
AAA_19	PF13245.1	gi|297621234|ref|YP_003709371.1|	-	0.057	13.1	0.0	0.13	12.0	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AFG1_ATPase	PF03969.11	gi|297621234|ref|YP_003709371.1|	-	0.058	12.1	0.7	0.19	10.5	0.5	1.9	1	1	0	1	1	1	0	AFG1-like	ATPase
60KD_IMP	PF02096.15	gi|297621235|ref|YP_003709372.1|	-	1.9e-60	203.9	12.8	2.4e-60	203.5	6.3	2.2	2	0	0	2	2	2	1	60Kd	inner	membrane	protein
YidC_periplas	PF14849.1	gi|297621235|ref|YP_003709372.1|	-	1.5e-08	34.8	0.2	1.7e-07	31.4	0.0	2.4	2	1	0	2	2	2	1	YidC	periplasmic	domain
FGE-sulfatase	PF03781.11	gi|297621236|ref|YP_003709373.1|	-	5.7e-62	209.4	0.9	9.1e-62	208.7	0.6	1.2	1	0	0	1	1	1	1	Sulfatase-modifying	factor	enzyme	1
Pkinase	PF00069.20	gi|297621236|ref|YP_003709373.1|	-	4e-30	104.8	0.2	1.1e-29	103.3	0.1	1.8	1	1	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|297621236|ref|YP_003709373.1|	-	4.6e-17	61.9	0.5	1.4e-14	53.7	0.0	3.0	2	1	0	2	2	2	2	Protein	tyrosine	kinase
LMWPc	PF01451.16	gi|297621237|ref|YP_003709374.1|	-	1.3e-29	103.2	0.0	1.5e-29	103.1	0.0	1.0	1	0	0	1	1	1	1	Low	molecular	weight	phosphotyrosine	protein	phosphatase
PTS_IIB	PF02302.12	gi|297621237|ref|YP_003709374.1|	-	0.1	13.1	0.0	10	6.6	0.0	2.3	1	1	1	2	2	2	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
DUF721	PF05258.7	gi|297621238|ref|YP_003709375.1|	-	3.2e-14	52.8	0.0	3.9e-14	52.6	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF721)
DNA_gyraseB	PF00204.20	gi|297621239|ref|YP_003709376.1|	-	7.2e-63	210.8	0.0	1.2e-62	210.1	0.0	1.4	1	0	0	1	1	1	1	DNA	gyrase	B
DNA_gyraseB_C	PF00986.16	gi|297621239|ref|YP_003709376.1|	-	4.6e-31	106.3	0.1	9e-31	105.4	0.1	1.5	1	0	0	1	1	1	1	DNA	gyrase	B	subunit,	carboxyl	terminus
Toprim	PF01751.17	gi|297621239|ref|YP_003709376.1|	-	3e-26	91.2	0.0	1e-25	89.5	0.0	2.0	1	0	0	1	1	1	1	Toprim	domain
HATPase_c	PF02518.21	gi|297621239|ref|YP_003709376.1|	-	4.3e-16	58.6	0.1	1.3e-15	57.0	0.1	1.9	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_3	PF13589.1	gi|297621239|ref|YP_003709376.1|	-	1.1e-05	25.0	0.2	2.7e-05	23.8	0.1	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
DNA_topoisoIV	PF00521.15	gi|297621240|ref|YP_003709377.1|	-	1.1e-152	508.7	0.1	1.4e-152	508.4	0.0	1.1	1	0	0	1	1	1	1	DNA	gyrase/topoisomerase	IV,	subunit	A
DNA_gyraseA_C	PF03989.8	gi|297621240|ref|YP_003709377.1|	-	5.3e-59	195.3	10.0	1.5e-13	49.7	0.2	6.5	6	0	0	6	6	6	6	DNA	gyrase	C-terminal	domain,	beta-propeller
DUF2360	PF10152.4	gi|297621240|ref|YP_003709377.1|	-	0.051	13.8	0.1	0.092	13.0	0.0	1.3	1	0	0	1	1	1	0	Predicted	coiled-coil	domain-containing	protein	(DUF2360)
Thymidylate_kin	PF02223.12	gi|297621242|ref|YP_003709379.1|	-	8e-53	178.5	0.0	9e-53	178.4	0.0	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_28	PF13521.1	gi|297621242|ref|YP_003709379.1|	-	2.3e-10	40.6	0.0	2.8e-10	40.3	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|297621242|ref|YP_003709379.1|	-	2.3e-07	31.1	0.1	4.4e-07	30.2	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|297621242|ref|YP_003709379.1|	-	8.4e-05	22.2	0.0	0.00071	19.2	0.0	2.3	3	0	0	3	3	3	1	Part	of	AAA	domain
AAA_33	PF13671.1	gi|297621242|ref|YP_003709379.1|	-	0.00014	21.7	0.1	0.00053	19.8	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|297621242|ref|YP_003709379.1|	-	0.00014	22.6	0.1	0.00027	21.7	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|297621242|ref|YP_003709379.1|	-	0.00048	19.8	0.0	0.0014	18.3	0.0	1.7	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
TrwB_AAD_bind	PF10412.4	gi|297621242|ref|YP_003709379.1|	-	0.0011	17.6	0.0	0.0015	17.1	0.0	1.2	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ATP_bind_1	PF03029.12	gi|297621242|ref|YP_003709379.1|	-	0.0026	17.3	0.1	0.011	15.2	0.0	1.9	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
AAA_30	PF13604.1	gi|297621242|ref|YP_003709379.1|	-	0.0033	17.0	0.0	0.0054	16.3	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|297621242|ref|YP_003709379.1|	-	0.0035	17.4	0.0	0.0089	16.1	0.0	1.7	1	1	1	2	2	2	1	AAA	domain
SRP54	PF00448.17	gi|297621242|ref|YP_003709379.1|	-	0.0036	16.7	0.0	0.0061	16.0	0.0	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_16	PF13191.1	gi|297621242|ref|YP_003709379.1|	-	0.0043	17.0	0.0	0.012	15.6	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
NTPase_1	PF03266.10	gi|297621242|ref|YP_003709379.1|	-	0.0054	16.4	0.2	0.025	14.2	0.0	2.2	2	1	0	2	2	2	1	NTPase
SKI	PF01202.17	gi|297621242|ref|YP_003709379.1|	-	0.011	15.6	0.2	1.5	8.6	0.0	2.3	2	0	0	2	2	2	0	Shikimate	kinase
KTI12	PF08433.5	gi|297621242|ref|YP_003709379.1|	-	0.011	14.9	0.0	0.26	10.4	0.0	2.2	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
NACHT	PF05729.7	gi|297621242|ref|YP_003709379.1|	-	0.012	15.2	0.0	0.025	14.2	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
KAP_NTPase	PF07693.9	gi|297621242|ref|YP_003709379.1|	-	0.013	14.4	0.0	0.017	14.1	0.0	1.2	1	0	0	1	1	1	0	KAP	family	P-loop	domain
AAA_10	PF12846.2	gi|297621242|ref|YP_003709379.1|	-	0.017	14.5	0.0	0.046	13.1	0.0	1.4	1	1	0	1	1	1	0	AAA-like	domain
Arch_ATPase	PF01637.13	gi|297621242|ref|YP_003709379.1|	-	0.018	14.7	0.1	0.025	14.2	0.1	1.6	1	1	0	1	1	1	0	Archaeal	ATPase
CbiA	PF01656.18	gi|297621242|ref|YP_003709379.1|	-	0.032	13.6	0.0	0.068	12.5	0.0	1.5	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ABC_tran	PF00005.22	gi|297621242|ref|YP_003709379.1|	-	0.035	14.4	0.0	0.055	13.7	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter
AAA	PF00004.24	gi|297621242|ref|YP_003709379.1|	-	0.05	13.8	0.0	0.086	13.0	0.0	1.6	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
cobW	PF02492.14	gi|297621242|ref|YP_003709379.1|	-	0.054	12.9	0.0	0.091	12.1	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
UPF0079	PF02367.12	gi|297621242|ref|YP_003709379.1|	-	0.055	13.0	0.1	0.13	11.8	0.0	1.6	2	0	0	2	2	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
T2SE	PF00437.15	gi|297621242|ref|YP_003709379.1|	-	0.07	12.0	0.0	0.14	11.0	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_14	PF13173.1	gi|297621242|ref|YP_003709379.1|	-	0.08	12.8	0.3	0.23	11.3	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
Miro	PF08477.8	gi|297621242|ref|YP_003709379.1|	-	0.08	13.4	0.0	0.26	11.8	0.0	1.8	2	0	0	2	2	2	0	Miro-like	protein
ArgK	PF03308.11	gi|297621242|ref|YP_003709379.1|	-	0.096	11.4	0.0	0.15	10.8	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
DNA_pol3_delta2	PF13177.1	gi|297621243|ref|YP_003709380.1|	-	3.9e-31	107.9	1.5	1.4e-30	106.0	0.0	2.4	2	1	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
AAA	PF00004.24	gi|297621243|ref|YP_003709380.1|	-	0.0041	17.3	0.2	0.048	13.8	0.0	2.2	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
T3SS_LEE_assoc	PF13327.1	gi|297621243|ref|YP_003709380.1|	-	0.037	13.5	0.1	0.072	12.6	0.1	1.5	1	0	0	1	1	1	0	Type	III	secretion	system	subunit
Chorismate_bind	PF00425.13	gi|297621244|ref|YP_003709381.1|	-	4.2e-38	131.1	0.0	5e-38	130.8	0.0	1.1	1	0	0	1	1	1	1	chorismate	binding	enzyme
TPP_enzyme_N	PF02776.13	gi|297621245|ref|YP_003709382.1|	-	2e-26	92.4	0.0	2.8e-26	92.0	0.0	1.3	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
CytB6-F_Fe-S	PF08802.5	gi|297621246|ref|YP_003709383.1|	-	0.05	13.6	0.5	0.05	13.6	0.4	2.0	1	1	1	2	2	2	0	Cytochrome	B6-F	complex	Fe-S	subunit
IstB_IS21	PF01695.12	gi|297621248|ref|YP_003709385.1|	-	8.4e-12	44.8	0.0	1e-11	44.6	0.0	1.0	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
Met_gamma_lyase	PF06838.6	gi|297621248|ref|YP_003709385.1|	-	0.16	10.2	0.0	0.18	10.0	0.0	1.0	1	0	0	1	1	1	0	Methionine	gamma-lyase
Imm33	PF15580.1	gi|297621249|ref|YP_003709386.1|	-	8.4e-33	111.7	2.8	1.1e-32	111.3	2.0	1.1	1	0	0	1	1	1	1	Immunity	protein	33
Toxin_40	PF15520.1	gi|297621250|ref|YP_003709387.1|	-	0.018	14.5	0.6	0.03	13.7	0.4	1.4	1	0	0	1	1	1	0	Putative	toxin	40
CytB6-F_Fe-S	PF08802.5	gi|297621250|ref|YP_003709387.1|	-	0.14	12.1	2.0	0.16	11.9	0.1	2.1	2	0	0	2	2	2	0	Cytochrome	B6-F	complex	Fe-S	subunit
RHS_repeat	PF05593.9	gi|297621251|ref|YP_003709388.1|	-	2.9e-43	145.2	70.1	4.3e-05	23.5	0.1	23.8	17	5	7	25	25	25	17	RHS	Repeat
MORN_2	PF07661.8	gi|297621251|ref|YP_003709388.1|	-	0.23	11.5	7.6	22	5.5	0.5	6.2	4	0	0	4	4	4	0	MORN	repeat	variant
DUF1372	PF07116.6	gi|297621253|ref|YP_003709390.1|	-	0.06	13.3	0.0	0.11	12.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1372)
TPP_enzyme_C	PF02775.16	gi|297621253|ref|YP_003709390.1|	-	0.19	11.3	0.0	0.59	9.6	0.0	1.7	2	0	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DUF2937	PF11157.3	gi|297621254|ref|YP_003709391.1|	-	4.4e-36	123.7	1.9	4.8e-36	123.6	1.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2937)
PHB_acc	PF05233.8	gi|297621254|ref|YP_003709391.1|	-	0.01	15.5	2.0	0.022	14.4	1.4	1.5	1	0	0	1	1	1	0	PHB	accumulation	regulatory	domain
Tox-WTIP	PF15654.1	gi|297621254|ref|YP_003709391.1|	-	0.13	11.8	0.2	0.21	11.2	0.2	1.3	1	0	0	1	1	1	0	Toxin	with	a	conserved	tryptophan	and	TIP	tripeptide	motif
ECH	PF00378.15	gi|297621255|ref|YP_003709392.1|	-	3.3e-68	229.4	0.0	4.1e-68	229.1	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
SDH_sah	PF01972.11	gi|297621255|ref|YP_003709392.1|	-	0.0039	16.0	0.0	0.0055	15.5	0.0	1.2	1	0	0	1	1	1	1	Serine	dehydrogenase	proteinase
UbiA	PF01040.13	gi|297621256|ref|YP_003709393.1|	-	2.8e-38	131.6	26.1	3.4e-38	131.3	18.1	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
MR_MLE	PF01188.16	gi|297621257|ref|YP_003709394.1|	-	4.2e-07	30.3	0.0	7.4e-07	29.6	0.0	1.4	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
AMP-binding	PF00501.23	gi|297621258|ref|YP_003709395.1|	-	3.3e-27	94.9	0.0	4.1e-27	94.6	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
Caudo_TAP	PF02413.12	gi|297621259|ref|YP_003709396.1|	-	0.016	15.3	2.2	1.6	8.9	0.1	2.7	2	0	0	2	2	2	0	Caudovirales	tail	fibre	assembly	protein
DUF3782	PF12644.2	gi|297621259|ref|YP_003709396.1|	-	0.017	14.9	1.1	0.051	13.3	0.8	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3782)
Glyco_transf_41	PF13844.1	gi|297621259|ref|YP_003709396.1|	-	0.033	12.1	0.1	0.048	11.6	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	transferase	family	41
Membr_traf_MHD	PF10540.4	gi|297621259|ref|YP_003709396.1|	-	0.063	13.0	0.4	0.27	11.0	0.1	2.0	2	0	0	2	2	2	0	Munc13	(mammalian	uncoordinated)	homology	domain
Glycos_transf_2	PF00535.21	gi|297621260|ref|YP_003709397.1|	-	1.4e-38	132.1	0.0	2.3e-38	131.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.4	gi|297621260|ref|YP_003709397.1|	-	1.2e-17	63.9	0.0	1.7e-17	63.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.1	gi|297621260|ref|YP_003709397.1|	-	3.7e-16	59.6	0.0	6e-16	58.9	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
TPR_2	PF07719.12	gi|297621260|ref|YP_003709397.1|	-	4.3e-14	51.2	1.3	0.00011	21.8	0.1	3.6	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|297621260|ref|YP_003709397.1|	-	7.8e-13	47.8	1.2	1.6e-12	46.8	0.4	1.9	2	0	0	2	2	2	1	TPR	repeat
TPR_1	PF00515.23	gi|297621260|ref|YP_003709397.1|	-	2.7e-10	39.4	1.7	0.0046	16.5	0.0	3.7	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297621260|ref|YP_003709397.1|	-	4e-07	30.5	0.3	2.1e-06	28.2	0.1	2.2	2	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297621260|ref|YP_003709397.1|	-	5.4e-07	29.4	1.7	0.013	15.3	0.0	3.4	2	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|297621260|ref|YP_003709397.1|	-	6.9e-07	29.5	2.1	1.6e-06	28.3	0.1	2.4	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|297621260|ref|YP_003709397.1|	-	1.2e-06	28.2	0.7	0.0095	16.0	0.1	3.7	3	0	0	3	3	3	2	Tetratricopeptide	repeat
Glyco_tranf_2_4	PF13704.1	gi|297621260|ref|YP_003709397.1|	-	2.1e-06	27.9	0.0	2e-05	24.8	0.0	2.2	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
TPR_7	PF13176.1	gi|297621260|ref|YP_003709397.1|	-	5.7e-05	22.6	0.1	0.67	9.9	0.0	2.9	2	0	0	2	2	2	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297621260|ref|YP_003709397.1|	-	0.00076	19.5	1.4	0.0032	17.5	0.8	2.1	1	1	1	2	2	2	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_14	PF13428.1	gi|297621260|ref|YP_003709397.1|	-	0.00086	19.7	1.7	0.46	11.2	0.1	3.1	2	1	1	3	3	2	2	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297621260|ref|YP_003709397.1|	-	0.0035	17.0	0.1	0.54	10.1	0.0	3.0	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|297621260|ref|YP_003709397.1|	-	0.0051	17.1	1.2	0.8	10.3	0.0	3.2	3	0	0	3	3	2	1	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|297621260|ref|YP_003709397.1|	-	0.011	15.6	5.1	0.4	10.6	0.3	3.6	4	0	0	4	4	4	0	Tetratricopeptide	repeat
Glyco_trans_2_3	PF13632.1	gi|297621260|ref|YP_003709397.1|	-	0.1	12.3	0.0	0.19	11.3	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	family	group	2
Ubie_methyltran	PF01209.13	gi|297621261|ref|YP_003709398.1|	-	1.4e-63	214.1	0.0	1.7e-63	213.9	0.0	1.0	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_31	PF13847.1	gi|297621261|ref|YP_003709398.1|	-	1e-21	77.1	0.0	1.5e-21	76.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297621261|ref|YP_003709398.1|	-	2.3e-20	72.8	0.0	3.4e-20	72.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297621261|ref|YP_003709398.1|	-	1.3e-15	57.5	0.0	7.7e-15	55.0	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297621261|ref|YP_003709398.1|	-	9.5e-14	51.9	0.0	1.6e-13	51.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297621261|ref|YP_003709398.1|	-	2.3e-11	43.6	0.0	3.3e-11	43.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297621261|ref|YP_003709398.1|	-	2.4e-11	43.9	0.0	4.1e-11	43.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297621261|ref|YP_003709398.1|	-	7e-11	42.1	0.0	1.4e-10	41.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|297621261|ref|YP_003709398.1|	-	4.8e-06	26.0	0.0	7.4e-06	25.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_8	PF05148.10	gi|297621261|ref|YP_003709398.1|	-	0.00012	21.7	0.0	0.0017	17.9	0.0	2.1	1	1	0	1	1	1	1	Hypothetical	methyltransferase
UPF0020	PF01170.13	gi|297621261|ref|YP_003709398.1|	-	0.0016	18.0	0.0	0.0029	17.2	0.0	1.4	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
MetW	PF07021.7	gi|297621261|ref|YP_003709398.1|	-	0.0064	15.8	0.0	0.0098	15.2	0.0	1.4	1	1	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_5	PF01795.14	gi|297621261|ref|YP_003709398.1|	-	0.031	13.5	0.0	0.07	12.4	0.0	1.5	1	1	0	1	1	1	0	MraW	methylase	family
Methyltransf_32	PF13679.1	gi|297621261|ref|YP_003709398.1|	-	0.066	12.8	0.0	0.1	12.2	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
DUF3604	PF12228.3	gi|297621263|ref|YP_003709400.1|	-	7.3e-08	31.0	5.1	0.0003	19.1	0.0	3.7	4	1	1	5	5	5	2	Protein	of	unknown	function	(DUF3604)
He_PIG_assoc	PF10632.4	gi|297621263|ref|YP_003709400.1|	-	0.013	14.8	0.8	0.052	12.8	0.0	2.2	2	0	0	2	2	2	0	He_PIG	associated,	NEW1	domain	of	bacterial	glycohydrolase
I-set	PF07679.11	gi|297621263|ref|YP_003709400.1|	-	0.014	15.2	0.0	0.073	12.9	0.0	2.2	2	0	0	2	2	2	0	Immunoglobulin	I-set	domain
DUF3552	PF12072.3	gi|297621264|ref|YP_003709401.1|	-	1.7e-23	82.9	28.0	1.7e-23	82.9	19.4	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF3552)
HD	PF01966.17	gi|297621264|ref|YP_003709401.1|	-	3.1e-13	49.7	9.4	3.3e-13	49.7	0.2	2.9	3	0	0	3	3	3	2	HD	domain
KH_1	PF00013.24	gi|297621264|ref|YP_003709401.1|	-	5.7e-09	35.4	0.0	2.8e-08	33.2	0.0	2.2	2	0	0	2	2	2	1	KH	domain
HDOD	PF08668.7	gi|297621264|ref|YP_003709401.1|	-	9.2e-05	21.7	0.1	0.0027	16.9	0.1	2.7	2	0	0	2	2	2	1	HDOD	domain
KH_4	PF13083.1	gi|297621264|ref|YP_003709401.1|	-	0.00015	21.3	0.4	0.0017	17.9	0.0	2.8	2	1	0	2	2	2	1	KH	domain
KH_3	PF13014.1	gi|297621264|ref|YP_003709401.1|	-	0.00039	20.0	0.2	0.00098	18.7	0.1	1.7	1	0	0	1	1	1	1	KH	domain
KH_2	PF07650.12	gi|297621264|ref|YP_003709401.1|	-	0.3	10.6	4.6	0.21	11.1	0.1	3.1	3	1	0	3	3	3	0	KH	domain
CorC_HlyC	PF03471.12	gi|297621265|ref|YP_003709402.1|	-	8.1e-21	73.5	0.0	2.2e-20	72.2	0.0	1.8	2	0	0	2	2	2	1	Transporter	associated	domain
CBS	PF00571.23	gi|297621265|ref|YP_003709402.1|	-	1.1e-19	69.8	0.6	1.6e-08	34.1	0.0	2.7	2	0	0	2	2	2	2	CBS	domain
DUF21	PF01595.15	gi|297621265|ref|YP_003709402.1|	-	8.6e-11	41.4	8.3	2.4e-10	39.9	5.7	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF21
DUF2346	PF09803.4	gi|297621265|ref|YP_003709402.1|	-	0.072	12.9	0.2	2.4	8.0	0.0	2.8	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2346)
UPF0054	PF02130.12	gi|297621266|ref|YP_003709403.1|	-	5e-28	97.2	0.1	5.6e-28	97.0	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0054
DUF1664	PF07889.7	gi|297621269|ref|YP_003709406.1|	-	8.5e-05	22.3	5.0	0.49	10.2	0.0	4.0	3	1	1	4	4	4	3	Protein	of	unknown	function	(DUF1664)
PMC2NT	PF08066.7	gi|297621269|ref|YP_003709406.1|	-	0.00018	21.7	0.9	0.036	14.3	0.0	3.7	3	1	1	4	4	4	1	PMC2NT	(NUC016)	domain
Prominin	PF05478.6	gi|297621269|ref|YP_003709406.1|	-	0.0023	15.5	4.0	0.29	8.6	0.1	2.5	2	1	0	2	2	2	2	Prominin
Dynamin_M	PF01031.15	gi|297621269|ref|YP_003709406.1|	-	0.0025	16.6	10.0	0.1	11.3	0.2	3.7	1	1	1	3	3	3	2	Dynamin	central	region
Apolipoprotein	PF01442.13	gi|297621269|ref|YP_003709406.1|	-	0.0051	16.3	1.3	0.73	9.3	0.9	3.4	1	1	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
BAR	PF03114.13	gi|297621269|ref|YP_003709406.1|	-	0.035	13.6	2.8	0.057	12.9	0.6	2.3	1	1	1	2	2	2	0	BAR	domain
Baculo_PEP_C	PF04513.7	gi|297621269|ref|YP_003709406.1|	-	0.039	13.7	1.0	6.2	6.6	0.1	3.7	3	1	0	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Laminin_II	PF06009.7	gi|297621269|ref|YP_003709406.1|	-	0.07	12.8	9.4	0.69	9.6	1.4	3.9	3	1	0	3	3	3	0	Laminin	Domain	II
DUF2884	PF11101.3	gi|297621269|ref|YP_003709406.1|	-	0.071	12.4	6.2	1.9	7.7	0.1	3.8	2	1	1	4	4	4	0	Protein	of	unknown	function	(DUF2884)
DUF4455	PF14643.1	gi|297621269|ref|YP_003709406.1|	-	0.074	11.6	5.6	0.018	13.6	0.9	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4455)
ISG65-75	PF11727.3	gi|297621269|ref|YP_003709406.1|	-	0.082	11.9	3.6	2.4	7.1	0.1	3.2	3	1	1	4	4	4	0	Invariant	surface	glycoprotein
ApoO	PF09769.4	gi|297621269|ref|YP_003709406.1|	-	0.094	12.4	2.8	4.4	6.9	0.1	3.5	2	1	0	3	3	3	0	Apolipoprotein	O
YGGT	PF02325.12	gi|297621269|ref|YP_003709406.1|	-	0.17	11.8	6.7	18	5.3	0.0	4.8	4	2	2	6	6	6	0	YGGT	family
SseC	PF04888.7	gi|297621269|ref|YP_003709406.1|	-	0.46	9.7	8.0	6.1	6.0	0.0	3.8	3	2	0	3	3	3	0	Secretion	system	effector	C	(SseC)	like	family
HSCB_C	PF07743.8	gi|297621269|ref|YP_003709406.1|	-	1	9.8	7.6	35	4.9	0.0	4.6	5	0	0	5	5	5	0	HSCB	C-terminal	oligomerisation	domain
MCPsignal	PF00015.16	gi|297621269|ref|YP_003709406.1|	-	1.1	8.7	9.0	0.33	10.4	0.3	3.1	3	1	0	3	3	3	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Sipho_Gp157	PF05565.6	gi|297621269|ref|YP_003709406.1|	-	4.9	6.7	11.1	2.5	7.6	1.2	3.1	2	1	0	2	2	2	0	Siphovirus	Gp157
COG2	PF06148.6	gi|297621269|ref|YP_003709406.1|	-	5.2	6.9	13.1	6.1	6.7	0.1	4.3	4	1	1	5	5	5	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DegS	PF05384.6	gi|297621269|ref|YP_003709406.1|	-	8.6	5.5	16.9	0.21	10.7	0.2	4.6	4	1	1	5	5	5	0	Sensor	protein	DegS
YtxH	PF12732.2	gi|297621269|ref|YP_003709406.1|	-	9.6	6.6	12.4	15	6.0	0.5	4.0	3	2	0	3	3	2	0	YtxH-like	protein
ApoLp-III	PF07464.6	gi|297621269|ref|YP_003709406.1|	-	9.8	6.1	13.3	2.1	8.3	0.0	3.9	4	1	0	4	4	4	0	Apolipophorin-III	precursor	(apoLp-III)
DNA_pol3_chi	PF04364.8	gi|297621270|ref|YP_003709407.1|	-	6.7e-22	77.8	0.1	7.3e-22	77.6	0.0	1.0	1	0	0	1	1	1	1	DNA	polymerase	III	chi	subunit,	HolC
DUF502	PF04367.8	gi|297621271|ref|YP_003709408.1|	-	2.8e-28	97.8	2.7	3.8e-28	97.3	0.1	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF502)
PEN-2	PF10251.4	gi|297621271|ref|YP_003709408.1|	-	0.0059	16.7	1.9	0.0077	16.4	0.7	1.7	1	1	0	1	1	1	1	Presenilin	enhancer-2	subunit	of	gamma	secretase
Transposase_28	PF04195.7	gi|297621271|ref|YP_003709408.1|	-	1.9	7.7	4.8	3.5	6.9	3.3	1.4	1	0	0	1	1	1	0	Putative	gypsy	type	transposon
DUF502	PF04367.8	gi|297621272|ref|YP_003709409.1|	-	1.9e-35	120.8	5.7	5.6e-35	119.3	0.4	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF502)
DUF740	PF05340.7	gi|297621274|ref|YP_003709411.1|	-	0.037	12.3	2.5	0.063	11.6	1.6	1.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF740)
DUF4533	PF15047.1	gi|297621274|ref|YP_003709411.1|	-	0.042	13.2	0.1	0.4	10.0	0.0	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4533)
RNB	PF00773.14	gi|297621275|ref|YP_003709412.1|	-	8.3e-102	340.7	0.0	1.2e-101	340.2	0.0	1.3	1	0	0	1	1	1	1	RNB	domain
OB_RNB	PF08206.6	gi|297621275|ref|YP_003709412.1|	-	4.8e-17	61.1	0.1	1.3e-16	59.8	0.1	1.8	1	0	0	1	1	1	1	Ribonuclease	B	OB	domain
S1	PF00575.18	gi|297621275|ref|YP_003709412.1|	-	3.9e-07	30.0	3.7	0.00033	20.6	0.0	3.8	4	0	0	4	4	4	2	S1	RNA	binding	domain
tRNA-synt_1	PF00133.17	gi|297621276|ref|YP_003709413.1|	-	9e-63	212.2	0.0	2e-48	164.8	0.0	4.0	2	1	1	3	3	3	3	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1_2	PF13603.1	gi|297621276|ref|YP_003709413.1|	-	5.2e-60	201.9	0.0	1.3e-59	200.6	0.0	1.7	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1g	PF09334.6	gi|297621276|ref|YP_003709413.1|	-	1.4e-26	93.0	1.1	1.6e-20	73.1	0.0	3.1	4	0	0	4	4	4	2	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|297621276|ref|YP_003709413.1|	-	5.3e-16	58.7	0.1	3.1e-15	56.2	0.0	2.2	1	1	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1e	PF01406.14	gi|297621276|ref|YP_003709413.1|	-	0.042	12.9	0.0	6.3	5.8	0.0	2.5	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(C)	catalytic	domain
MAP	PF03642.8	gi|297621276|ref|YP_003709413.1|	-	0.064	13.4	0.1	0.23	11.7	0.0	1.9	2	0	0	2	2	2	0	MAP	domain
DUF2063	PF09836.4	gi|297621277|ref|YP_003709414.1|	-	1.6e-11	44.0	0.0	3.6e-11	42.9	0.0	1.6	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2063)
DUF692	PF05114.8	gi|297621278|ref|YP_003709415.1|	-	4.7e-85	284.8	0.0	5.8e-85	284.5	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF692)
Prenyltrans_1	PF13243.1	gi|297621280|ref|YP_003709417.1|	-	0.051	13.5	0.0	0.16	11.9	0.0	1.8	1	0	0	1	1	1	0	Prenyltransferase-like
DUF1741	PF08427.5	gi|297621281|ref|YP_003709418.1|	-	0.086	12.2	0.0	0.086	12.2	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1741)
Chorismate_synt	PF01264.16	gi|297621282|ref|YP_003709419.1|	-	4.8e-130	433.0	0.0	5.4e-130	432.9	0.0	1.0	1	0	0	1	1	1	1	Chorismate	synthase
Arginase	PF00491.16	gi|297621284|ref|YP_003709421.1|	-	3e-63	213.7	0.0	3.5e-63	213.5	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
TPR_2	PF07719.12	gi|297621284|ref|YP_003709421.1|	-	0.067	13.1	0.4	0.14	12.1	0.3	1.5	1	0	0	1	1	1	0	Tetratricopeptide	repeat
Amidohydro_4	PF13147.1	gi|297621285|ref|YP_003709422.1|	-	8.4e-22	78.4	4.2	6e-21	75.6	2.9	1.9	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|297621285|ref|YP_003709422.1|	-	5.8e-15	55.4	0.6	4.2e-10	39.4	0.1	2.2	1	1	1	2	2	2	2	Amidohydrolase	family
Amidohydro_1	PF01979.15	gi|297621285|ref|YP_003709422.1|	-	1e-12	48.4	0.2	2.4e-06	27.4	0.1	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|297621285|ref|YP_003709422.1|	-	1.1e-09	37.9	0.1	2.1e-09	37.0	0.1	1.5	1	0	0	1	1	1	1	Amidohydrolase
Urocanase	PF01175.13	gi|297621286|ref|YP_003709423.1|	-	9e-253	839.2	0.0	1e-252	839.0	0.0	1.0	1	0	0	1	1	1	1	Urocanase
Lyase_aromatic	PF00221.14	gi|297621287|ref|YP_003709424.1|	-	2.1e-176	587.0	0.3	2.4e-176	586.8	0.2	1.0	1	0	0	1	1	1	1	Aromatic	amino	acid	lyase
Cytochrom_B562	PF07361.6	gi|297621288|ref|YP_003709425.1|	-	0.036	14.4	0.1	11	6.4	0.0	2.1	2	0	0	2	2	2	0	Cytochrome	b562
GEMIN8	PF15348.1	gi|297621289|ref|YP_003709426.1|	-	0.0021	18.1	2.2	0.0021	18.1	1.5	1.1	1	0	0	1	1	1	1	Gemini	of	Cajal	bodies-associated	protein	8
Borrelia_REV	PF03978.8	gi|297621289|ref|YP_003709426.1|	-	0.021	14.5	0.7	0.021	14.5	0.5	1.2	1	1	0	1	1	1	0	Borrelia	burgdorferi	REV	protein
DUF2115	PF09888.4	gi|297621289|ref|YP_003709426.1|	-	0.021	14.9	2.7	0.026	14.6	1.9	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
Syntaxin_2	PF14523.1	gi|297621289|ref|YP_003709426.1|	-	0.069	13.1	1.1	0.14	12.2	0.8	1.5	1	1	0	1	1	1	0	Syntaxin-like	protein
Phytoreo_Pns	PF05451.6	gi|297621289|ref|YP_003709426.1|	-	0.071	11.7	0.1	0.087	11.4	0.1	1.1	1	0	0	1	1	1	0	Phytoreovirus	nonstructural	protein	Pns10/11
P4Ha_N	PF08336.6	gi|297621289|ref|YP_003709426.1|	-	0.098	12.4	2.1	0.22	11.3	1.5	1.7	1	1	0	1	1	1	0	Prolyl	4-Hydroxylase	alpha-subunit,	N-terminal	region
tRNA_NucTran2_2	PF13735.1	gi|297621289|ref|YP_003709426.1|	-	0.11	12.2	0.1	5.7	6.7	0.0	2.0	1	1	1	2	2	2	0	tRNA	nucleotidyltransferase	domain	2	putative
SRR	PF07709.6	gi|297621289|ref|YP_003709426.1|	-	0.13	12.5	0.8	3.7	8.1	0.1	2.9	2	0	0	2	2	2	0	Seven	Residue	Repeat
FH2	PF02181.18	gi|297621289|ref|YP_003709426.1|	-	0.19	10.5	5.1	0.64	8.8	1.3	2.0	1	1	1	2	2	2	0	Formin	Homology	2	Domain
LOH1CR12	PF10158.4	gi|297621289|ref|YP_003709426.1|	-	0.31	10.8	2.3	0.41	10.4	0.9	1.7	1	1	0	1	1	1	0	Tumour	suppressor	protein
PBP	PF01161.15	gi|297621290|ref|YP_003709427.1|	-	1e-34	119.4	0.0	1.1e-34	119.3	0.0	1.0	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
RibD_C	PF01872.12	gi|297621291|ref|YP_003709428.1|	-	4.9e-45	153.6	0.0	6.2e-45	153.2	0.0	1.1	1	0	0	1	1	1	1	RibD	C-terminal	domain
dCMP_cyt_deam_1	PF00383.17	gi|297621291|ref|YP_003709428.1|	-	2.6e-19	68.7	0.0	5.1e-19	67.8	0.0	1.5	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
APOBEC_N	PF08210.6	gi|297621291|ref|YP_003709428.1|	-	0.014	14.9	0.0	0.021	14.4	0.0	1.4	1	1	0	1	1	1	0	APOBEC-like	N-terminal	domain
AMP-binding	PF00501.23	gi|297621292|ref|YP_003709429.1|	-	1.4e-98	330.0	0.0	1.7e-98	329.7	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|297621292|ref|YP_003709429.1|	-	7e-22	78.1	0.2	5.9e-21	75.2	0.1	2.2	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
PDZ_1	PF12812.2	gi|297621293|ref|YP_003709430.1|	-	0.15	11.9	0.0	0.33	10.8	0.0	1.5	1	0	0	1	1	1	0	PDZ-like	domain
Zn_Tnp_IS1	PF03811.8	gi|297621294|ref|YP_003709431.1|	-	0.00016	21.0	3.9	0.00022	20.6	2.7	1.2	1	0	0	1	1	1	1	InsA	N-terminal	domain
zf-ISL3	PF14690.1	gi|297621294|ref|YP_003709431.1|	-	0.0015	18.5	0.8	0.045	13.7	0.1	2.2	2	0	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF2387	PF09526.5	gi|297621294|ref|YP_003709431.1|	-	0.0023	17.7	0.4	0.0026	17.6	0.3	1.1	1	0	0	1	1	1	1	Probable	metal-binding	protein	(DUF2387)
Zn-ribbon_8	PF09723.5	gi|297621294|ref|YP_003709431.1|	-	0.013	15.4	2.9	1.4	8.9	0.1	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-C2H2_4	PF13894.1	gi|297621294|ref|YP_003709431.1|	-	0.014	15.7	1.5	3.3	8.2	0.2	2.4	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zf-Di19	PF05605.7	gi|297621294|ref|YP_003709431.1|	-	0.032	14.3	0.5	0.071	13.2	0.2	1.7	1	1	1	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
Zn_Tnp_IS1595	PF12760.2	gi|297621294|ref|YP_003709431.1|	-	0.033	13.9	5.4	0.046	13.5	3.8	1.2	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|297621294|ref|YP_003709431.1|	-	0.041	14.1	3.5	0.9	9.9	0.3	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
FYVE	PF01363.16	gi|297621294|ref|YP_003709431.1|	-	0.049	13.5	1.2	0.064	13.1	0.8	1.2	1	0	0	1	1	1	0	FYVE	zinc	finger
zinc_ribbon_4	PF13717.1	gi|297621294|ref|YP_003709431.1|	-	0.075	12.7	4.8	0.49	10.1	3.3	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
Mu-like_Com	PF10122.4	gi|297621294|ref|YP_003709431.1|	-	0.085	11.9	1.1	3.7	6.6	0.1	2.2	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
zf-ribbon_3	PF13248.1	gi|297621294|ref|YP_003709431.1|	-	0.11	11.7	1.6	4.5	6.5	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C2H2_jaz	PF12171.3	gi|297621294|ref|YP_003709431.1|	-	0.11	12.6	1.5	0.2	11.8	0.0	2.2	3	0	0	3	3	2	0	Zinc-finger	double-stranded	RNA-binding
zinc_ribbon_5	PF13719.1	gi|297621294|ref|YP_003709431.1|	-	0.14	11.7	5.1	1	8.9	3.6	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
GCC2_GCC3	PF07699.8	gi|297621294|ref|YP_003709431.1|	-	0.16	11.6	3.2	0.33	10.5	2.2	1.5	1	1	0	1	1	1	0	GCC2	and	GCC3
zf-DNA_Pol	PF08996.5	gi|297621294|ref|YP_003709431.1|	-	0.16	11.3	0.9	0.18	11.1	0.6	1.1	1	0	0	1	1	1	0	DNA	Polymerase	alpha	zinc	finger
DZR	PF12773.2	gi|297621294|ref|YP_003709431.1|	-	0.16	11.8	3.7	0.29	10.9	2.6	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-C2H2_6	PF13912.1	gi|297621294|ref|YP_003709431.1|	-	0.2	11.5	0.2	0.2	11.5	0.1	1.8	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Zn_Tnp_IS91	PF14319.1	gi|297621294|ref|YP_003709431.1|	-	0.2	11.1	3.5	0.4	10.2	2.4	1.5	1	1	0	1	1	1	0	Transposase	zinc-binding	domain
zf-C2H2	PF00096.21	gi|297621294|ref|YP_003709431.1|	-	0.24	11.7	6.2	0.94	9.9	0.2	2.7	1	1	1	2	2	2	0	Zinc	finger,	C2H2	type
COX5B	PF01215.14	gi|297621294|ref|YP_003709431.1|	-	0.25	10.9	1.0	0.43	10.2	0.2	1.7	1	1	1	2	2	2	0	Cytochrome	c	oxidase	subunit	Vb
Ribosomal_S27e	PF01667.12	gi|297621294|ref|YP_003709431.1|	-	0.25	10.8	1.7	0.89	9.1	1.2	1.9	1	1	0	1	1	1	0	Ribosomal	protein	S27
zf-TFIIB	PF13453.1	gi|297621294|ref|YP_003709431.1|	-	0.31	10.2	1.6	0.5	9.5	1.1	1.3	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
TFIIS_C	PF01096.13	gi|297621294|ref|YP_003709431.1|	-	0.48	10.1	2.9	12	5.5	0.2	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Ribosomal_S14	PF00253.16	gi|297621294|ref|YP_003709431.1|	-	0.49	9.8	3.6	0.16	11.3	0.9	1.4	1	1	0	1	1	1	0	Ribosomal	protein	S14p/S29e
CpXC	PF14353.1	gi|297621294|ref|YP_003709431.1|	-	0.69	9.8	2.8	14	5.6	0.1	2.0	1	1	1	2	2	2	0	CpXC	protein
PhnA_Zn_Ribbon	PF08274.7	gi|297621294|ref|YP_003709431.1|	-	0.96	9.2	3.1	3.1	7.6	0.4	2.1	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zinc_ribbon_2	PF13240.1	gi|297621294|ref|YP_003709431.1|	-	1.2	8.7	4.5	8.3	6.0	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Sgf11	PF08209.6	gi|297621294|ref|YP_003709431.1|	-	1.5	8.1	6.1	0.8	9.0	0.1	2.3	2	1	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Fer4_4	PF12800.2	gi|297621294|ref|YP_003709431.1|	-	2.5	8.6	4.5	22	5.6	0.4	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Pro_isomerase	PF00160.16	gi|297621296|ref|YP_003709433.1|	-	1.3e-47	161.9	0.6	1.6e-47	161.6	0.4	1.1	1	0	0	1	1	1	1	Cyclophilin	type	peptidyl-prolyl	cis-trans	isomerase/CLD
RrnaAD	PF00398.15	gi|297621297|ref|YP_003709434.1|	-	2e-12	46.7	0.0	2.5e-12	46.4	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_12	PF08242.7	gi|297621297|ref|YP_003709434.1|	-	1.4e-09	38.3	0.0	2.3e-09	37.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297621297|ref|YP_003709434.1|	-	1.7e-08	34.5	0.0	3.3e-08	33.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297621297|ref|YP_003709434.1|	-	9.6e-08	31.7	0.0	3.2e-07	30.0	0.0	1.6	1	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297621297|ref|YP_003709434.1|	-	1.3e-07	32.1	0.0	2.1e-07	31.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|297621297|ref|YP_003709434.1|	-	1.1e-06	28.1	0.0	1.8e-06	27.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_25	PF13649.1	gi|297621297|ref|YP_003709434.1|	-	2.1e-06	28.0	0.0	3.4e-06	27.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297621297|ref|YP_003709434.1|	-	3.5e-06	26.8	0.0	4.2e-06	26.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_PK	PF05891.7	gi|297621297|ref|YP_003709434.1|	-	9.2e-05	21.8	0.0	0.0001	21.7	0.0	1.1	1	0	0	1	1	1	1	AdoMet	dependent	proline	di-methyltransferase
Methyltransf_11	PF08241.7	gi|297621297|ref|YP_003709434.1|	-	0.00012	22.4	0.0	0.0002	21.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
NodS	PF05401.6	gi|297621297|ref|YP_003709434.1|	-	0.00019	20.9	0.0	0.00027	20.4	0.0	1.1	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
Ubie_methyltran	PF01209.13	gi|297621297|ref|YP_003709434.1|	-	0.0063	15.6	0.0	0.0088	15.1	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
PCMT	PF01135.14	gi|297621297|ref|YP_003709434.1|	-	0.022	14.2	0.0	0.032	13.7	0.0	1.2	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Tmemb_14	PF03647.8	gi|297621298|ref|YP_003709435.1|	-	3.1e-20	72.3	16.7	3.4e-20	72.2	11.6	1.0	1	0	0	1	1	1	1	Transmembrane	proteins	14C
Abi	PF02517.11	gi|297621298|ref|YP_003709435.1|	-	3.5	7.8	8.3	3.8	7.7	4.4	2.0	1	1	1	2	2	2	0	CAAX	protease	self-immunity
DLH	PF01738.13	gi|297621299|ref|YP_003709436.1|	-	5.5e-44	150.0	0.1	6.6e-44	149.7	0.0	1.0	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_5	PF12695.2	gi|297621299|ref|YP_003709436.1|	-	9.6e-12	44.8	0.1	1.3e-11	44.4	0.1	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.16	gi|297621299|ref|YP_003709436.1|	-	7e-09	35.2	0.0	0.0015	17.8	0.0	2.2	1	1	0	2	2	2	2	Prolyl	oligopeptidase	family
BAAT_C	PF08840.6	gi|297621299|ref|YP_003709436.1|	-	4e-06	26.6	0.1	0.042	13.5	0.0	2.2	1	1	1	2	2	2	2	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Abhydrolase_2	PF02230.11	gi|297621299|ref|YP_003709436.1|	-	1.5e-05	24.5	0.0	2.3e-05	23.9	0.0	1.2	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
Abhydrolase_6	PF12697.2	gi|297621299|ref|YP_003709436.1|	-	0.00031	20.6	0.1	0.13	12.1	0.0	2.3	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
AXE1	PF05448.7	gi|297621299|ref|YP_003709436.1|	-	0.0011	17.5	0.1	0.0062	15.0	0.0	2.1	1	1	1	2	2	2	1	Acetyl	xylan	esterase	(AXE1)
DUF4019	PF13211.1	gi|297621300|ref|YP_003709437.1|	-	6.8e-31	106.6	0.0	8e-31	106.4	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4019)
MS_channel	PF00924.13	gi|297621301|ref|YP_003709438.1|	-	4.3e-51	173.1	2.4	8.9e-51	172.1	1.7	1.6	1	0	0	1	1	1	1	Mechanosensitive	ion	channel
YajC	PF02699.10	gi|297621301|ref|YP_003709438.1|	-	0.014	15.0	1.9	0.034	13.8	0.2	2.6	2	0	0	2	2	2	0	Preprotein	translocase	subunit
DUF2187	PF09953.4	gi|297621301|ref|YP_003709438.1|	-	0.04	13.6	0.1	0.11	12.2	0.0	1.7	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2187)
Glycos_transf_N	PF04413.11	gi|297621302|ref|YP_003709439.1|	-	2.9e-52	176.5	0.0	4.3e-52	175.9	0.0	1.2	1	0	0	1	1	1	1	3-Deoxy-D-manno-octulosonic-acid	transferase	(kdotransferase)
Epimerase_2	PF02350.14	gi|297621302|ref|YP_003709439.1|	-	0.00064	18.5	0.0	0.0012	17.6	0.0	1.4	1	0	0	1	1	1	1	UDP-N-acetylglucosamine	2-epimerase
Glycos_transf_1	PF00534.15	gi|297621302|ref|YP_003709439.1|	-	0.00066	19.1	0.0	0.0014	18.0	0.0	1.6	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
PP2C_2	PF13672.1	gi|297621303|ref|YP_003709440.1|	-	0.00099	18.5	0.1	0.003	16.9	0.0	1.9	1	1	0	1	1	1	1	Protein	phosphatase	2C
SpoIIE	PF07228.7	gi|297621303|ref|YP_003709440.1|	-	0.0024	17.6	0.3	0.0073	16.0	0.2	1.8	1	1	0	1	1	1	1	Stage	II	sporulation	protein	E	(SpoIIE)
RsbU_N	PF08673.5	gi|297621303|ref|YP_003709440.1|	-	0.088	12.8	1.1	0.26	11.3	0.1	2.2	2	0	0	2	2	2	0	Phosphoserine	phosphatase	RsbU,	N-terminal	domain
PP2C_2	PF13672.1	gi|297621304|ref|YP_003709441.1|	-	0.021	14.2	0.1	0.07	12.5	0.0	1.9	1	1	0	1	1	1	0	Protein	phosphatase	2C
SpoIIE	PF07228.7	gi|297621304|ref|YP_003709441.1|	-	0.024	14.3	0.0	0.048	13.3	0.0	1.6	1	0	0	1	1	1	0	Stage	II	sporulation	protein	E	(SpoIIE)
She9_MDM33	PF05546.6	gi|297621304|ref|YP_003709441.1|	-	0.099	12.1	2.0	1.2	8.5	0.0	2.4	2	0	0	2	2	2	0	She9	/	Mdm33	family
SpdB	PF05122.8	gi|297621304|ref|YP_003709441.1|	-	0.27	11.2	1.9	0.3	11.1	0.1	1.9	2	0	0	2	2	2	0	Mobile	element	transfer	protein
SDH_alpha	PF03313.10	gi|297621305|ref|YP_003709442.1|	-	5.3e-101	337.3	8.9	6.9e-101	337.0	6.1	1.1	1	0	0	1	1	1	1	Serine	dehydratase	alpha	chain
SDH_beta	PF03315.10	gi|297621305|ref|YP_003709442.1|	-	2.8e-57	193.2	0.1	9.9e-57	191.4	0.0	1.9	2	0	0	2	2	2	1	Serine	dehydratase	beta	chain
Abhydrolase_5	PF12695.2	gi|297621306|ref|YP_003709443.1|	-	3.3e-21	75.5	0.0	4.5e-21	75.1	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|297621306|ref|YP_003709443.1|	-	1e-18	68.0	0.0	1.5e-18	67.5	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.16	gi|297621306|ref|YP_003709443.1|	-	5.6e-18	64.9	0.0	1.1e-17	64.0	0.0	1.5	1	1	0	1	1	1	1	Prolyl	oligopeptidase	family
Peptidase_S15	PF02129.13	gi|297621306|ref|YP_003709443.1|	-	1.4e-08	34.4	0.0	2.5e-08	33.6	0.0	1.3	1	1	0	1	1	1	1	X-Pro	dipeptidyl-peptidase	(S15	family)
Abhydrolase_1	PF00561.15	gi|297621306|ref|YP_003709443.1|	-	1.2e-07	31.5	0.0	1.6e-05	24.5	0.0	2.1	1	1	0	2	2	2	1	alpha/beta	hydrolase	fold
Hydrolase_4	PF12146.3	gi|297621306|ref|YP_003709443.1|	-	1.9e-07	30.8	0.1	2.8e-06	27.0	0.0	2.2	2	0	0	2	2	2	1	Putative	lysophospholipase
Abhydrolase_3	PF07859.8	gi|297621306|ref|YP_003709443.1|	-	2.5e-07	30.5	0.0	3.3e-07	30.0	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
AXE1	PF05448.7	gi|297621306|ref|YP_003709443.1|	-	2.6e-07	29.4	0.0	0.00024	19.7	0.0	2.2	1	1	1	2	2	2	2	Acetyl	xylan	esterase	(AXE1)
BAAT_C	PF08840.6	gi|297621306|ref|YP_003709443.1|	-	2.6e-06	27.3	0.0	1.2e-05	25.0	0.0	1.9	1	1	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
DLH	PF01738.13	gi|297621306|ref|YP_003709443.1|	-	3.8e-06	26.3	0.1	0.044	13.0	0.0	2.6	2	1	0	2	2	2	2	Dienelactone	hydrolase	family
Abhydrolase_2	PF02230.11	gi|297621306|ref|YP_003709443.1|	-	4.5e-06	26.2	2.5	0.0083	15.5	0.0	3.1	3	0	0	3	3	3	2	Phospholipase/Carboxylesterase
DUF1100	PF06500.6	gi|297621306|ref|YP_003709443.1|	-	0.00024	19.7	0.0	0.00034	19.3	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	of	unknown	function	(DUF1100)
PAF-AH_p_II	PF03403.8	gi|297621306|ref|YP_003709443.1|	-	0.00093	17.5	0.3	0.086	11.1	0.0	2.2	2	0	0	2	2	2	2	Platelet-activating	factor	acetylhydrolase,	isoform	II
PFK	PF00365.15	gi|297621307|ref|YP_003709444.1|	-	5.4e-26	91.1	0.3	7.6e-26	90.7	0.2	1.2	1	0	0	1	1	1	1	Phosphofructokinase
EcoR124_C	PF12008.3	gi|297621307|ref|YP_003709444.1|	-	0.013	14.7	0.4	0.1	11.7	0.3	2.3	1	1	1	2	2	2	0	Type	I	restriction	and	modification	enzyme	-	subunit	R	C	terminal
DMRL_synthase	PF00885.14	gi|297621310|ref|YP_003709447.1|	-	7.8e-56	187.7	2.2	8.9e-56	187.5	1.5	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
DHBP_synthase	PF00926.14	gi|297621311|ref|YP_003709448.1|	-	9.5e-81	269.6	0.0	1.2e-80	269.3	0.0	1.1	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
GTP_cyclohydro2	PF00925.15	gi|297621311|ref|YP_003709448.1|	-	1.3e-73	245.7	0.0	1.9e-73	245.2	0.0	1.2	1	0	0	1	1	1	1	GTP	cyclohydrolase	II
Virul_fac_BrkB	PF03631.10	gi|297621313|ref|YP_003709450.1|	-	7.6e-55	186.0	25.6	9.3e-55	185.7	17.7	1.1	1	0	0	1	1	1	1	Virulence	factor	BrkB
Ribosomal_S25	PF03297.10	gi|297621313|ref|YP_003709450.1|	-	0.0047	16.9	0.0	0.0097	15.9	0.0	1.4	1	0	0	1	1	1	1	S25	ribosomal	protein
Rrf2	PF02082.15	gi|297621313|ref|YP_003709450.1|	-	0.0057	16.7	0.1	0.011	15.8	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
Bro-N	PF02498.12	gi|297621314|ref|YP_003709451.1|	-	7.3e-08	32.5	0.1	9e-08	32.3	0.0	1.1	1	0	0	1	1	1	1	BRO	family,	N-terminal	domain
DUF3279	PF11682.3	gi|297621316|ref|YP_003709453.1|	-	0.0026	17.3	0.1	0.0026	17.3	0.1	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3279)
CoiA	PF06054.6	gi|297621316|ref|YP_003709453.1|	-	0.015	14.1	14.9	0.04	12.8	10.4	1.9	1	1	0	1	1	1	0	Competence	protein	CoiA-like	family
Apis_Csd	PF11671.3	gi|297621316|ref|YP_003709453.1|	-	0.51	10.1	4.7	0.94	9.2	3.3	1.5	1	0	0	1	1	1	0	Complementary	sex	determiner	protein
DDE_Tnp_1_assoc	PF13808.1	gi|297621317|ref|YP_003709454.1|	-	4.9e-26	90.2	0.2	1.3e-25	88.8	0.0	1.8	2	0	0	2	2	2	1	DDE_Tnp_1-associated
DDE_Tnp_1	PF01609.16	gi|297621317|ref|YP_003709454.1|	-	2.1e-18	66.6	0.0	7.4e-18	64.8	0.0	1.8	1	1	0	1	1	1	1	Transposase	DDE	domain
DEK_C	PF08766.6	gi|297621317|ref|YP_003709454.1|	-	0.083	12.6	0.0	0.15	11.8	0.0	1.4	1	0	0	1	1	1	0	DEK	C	terminal	domain
Transposase_mut	PF00872.13	gi|297621318|ref|YP_003709455.1|	-	5e-08	31.9	0.0	5e-08	31.9	0.0	1.2	1	0	0	1	1	1	1	Transposase,	Mutator	family
Transposase_mut	PF00872.13	gi|297621319|ref|YP_003709456.1|	-	2e-18	66.1	0.1	2.2e-18	65.9	0.1	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
DDE_Tnp_IS240	PF13610.1	gi|297621319|ref|YP_003709456.1|	-	0.0037	17.2	0.0	0.004	17.1	0.0	1.1	1	0	0	1	1	1	1	DDE	domain
UPF0150	PF03681.10	gi|297621320|ref|YP_003709457.1|	-	3.6e-07	29.7	0.0	5.7e-07	29.0	0.0	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0150)
Fumble	PF03630.9	gi|297621320|ref|YP_003709457.1|	-	0.011	14.6	0.1	0.013	14.3	0.1	1.1	1	0	0	1	1	1	0	Fumble
DUF3832	PF12909.2	gi|297621320|ref|YP_003709457.1|	-	0.076	13.0	0.0	0.14	12.2	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3832)
DNA_pol3_beta	PF00712.14	gi|297621320|ref|YP_003709457.1|	-	0.088	12.7	0.0	0.13	12.2	0.0	1.4	1	0	0	1	1	1	0	DNA	polymerase	III	beta	subunit,	N-terminal	domain
YcfA	PF07927.7	gi|297621321|ref|YP_003709458.1|	-	5.1e-09	35.9	0.0	6.1e-09	35.6	0.0	1.1	1	0	0	1	1	1	1	YcfA-like	protein
DUF2883	PF11097.3	gi|297621323|ref|YP_003709460.1|	-	0.12	12.5	0.0	0.13	12.4	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2883)
ABC_tran	PF00005.22	gi|297621324|ref|YP_003709461.1|	-	9.8e-35	119.8	0.0	1.5e-34	119.2	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297621324|ref|YP_003709461.1|	-	1.9e-06	28.0	0.2	0.0059	16.6	0.2	2.2	1	1	1	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|297621324|ref|YP_003709461.1|	-	0.0002	20.5	0.1	0.00037	19.7	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
G-alpha	PF00503.15	gi|297621324|ref|YP_003709461.1|	-	0.00027	19.7	0.0	0.00041	19.1	0.0	1.2	1	0	0	1	1	1	1	G-protein	alpha	subunit
Zeta_toxin	PF06414.7	gi|297621324|ref|YP_003709461.1|	-	0.00028	20.0	0.0	0.00065	18.8	0.0	1.7	2	0	0	2	2	2	1	Zeta	toxin
NACHT	PF05729.7	gi|297621324|ref|YP_003709461.1|	-	0.00034	20.2	0.1	0.0008	19.1	0.1	1.6	1	0	0	1	1	1	1	NACHT	domain
AAA_16	PF13191.1	gi|297621324|ref|YP_003709461.1|	-	0.00051	20.0	0.0	0.00079	19.4	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|297621324|ref|YP_003709461.1|	-	0.00091	18.5	0.2	0.072	12.3	0.1	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
PduV-EutP	PF10662.4	gi|297621324|ref|YP_003709461.1|	-	0.0019	17.6	0.1	0.0039	16.6	0.1	1.5	1	0	0	1	1	1	1	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_19	PF13245.1	gi|297621324|ref|YP_003709461.1|	-	0.0037	16.9	0.0	0.0073	16.0	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_29	PF13555.1	gi|297621324|ref|YP_003709461.1|	-	0.0044	16.5	0.1	0.0088	15.5	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_5	PF07728.9	gi|297621324|ref|YP_003709461.1|	-	0.0054	16.4	0.0	0.013	15.2	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_10	PF12846.2	gi|297621324|ref|YP_003709461.1|	-	0.0056	16.1	0.1	0.11	11.9	0.0	2.1	2	0	0	2	2	2	1	AAA-like	domain
AAA_25	PF13481.1	gi|297621324|ref|YP_003709461.1|	-	0.0093	15.3	0.2	0.088	12.1	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|297621324|ref|YP_003709461.1|	-	0.01	15.7	0.1	0.041	13.7	0.0	2.1	3	0	0	3	3	1	0	AAA	domain
NB-ARC	PF00931.17	gi|297621324|ref|YP_003709461.1|	-	0.014	14.2	0.1	0.029	13.2	0.0	1.5	2	0	0	2	2	2	0	NB-ARC	domain
ATP-synt_ab	PF00006.20	gi|297621324|ref|YP_003709461.1|	-	0.016	14.6	0.2	0.033	13.6	0.1	1.4	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Arch_ATPase	PF01637.13	gi|297621324|ref|YP_003709461.1|	-	0.018	14.7	0.0	0.029	14.0	0.0	1.4	1	0	0	1	1	1	0	Archaeal	ATPase
AAA_22	PF13401.1	gi|297621324|ref|YP_003709461.1|	-	0.02	15.0	0.0	0.083	13.0	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|297621324|ref|YP_003709461.1|	-	0.02	14.4	0.0	0.039	13.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|297621324|ref|YP_003709461.1|	-	0.022	14.9	0.1	0.077	13.1	0.1	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
UPF0079	PF02367.12	gi|297621324|ref|YP_003709461.1|	-	0.022	14.3	0.0	0.045	13.3	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
T2SE	PF00437.15	gi|297621324|ref|YP_003709461.1|	-	0.024	13.5	0.3	0.04	12.8	0.2	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_18	PF13238.1	gi|297621324|ref|YP_003709461.1|	-	0.031	14.5	0.4	0.059	13.6	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
CoA_trans	PF01144.18	gi|297621324|ref|YP_003709461.1|	-	0.039	13.1	0.0	0.059	12.5	0.0	1.3	1	0	0	1	1	1	0	Coenzyme	A	transferase
Mg_chelatase	PF01078.16	gi|297621324|ref|YP_003709461.1|	-	0.039	13.1	0.0	0.08	12.0	0.0	1.5	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
RNA_helicase	PF00910.17	gi|297621324|ref|YP_003709461.1|	-	0.04	14.0	0.0	0.16	12.1	0.0	2.0	3	0	0	3	3	2	0	RNA	helicase
AAA_28	PF13521.1	gi|297621324|ref|YP_003709461.1|	-	0.041	13.8	0.2	0.1	12.5	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
cobW	PF02492.14	gi|297621324|ref|YP_003709461.1|	-	0.042	13.2	0.1	0.071	12.5	0.1	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
PIF1	PF05970.9	gi|297621324|ref|YP_003709461.1|	-	0.043	12.7	0.1	0.21	10.4	0.0	2.0	2	1	1	3	3	3	0	PIF1-like	helicase
AAA_15	PF13175.1	gi|297621324|ref|YP_003709461.1|	-	0.047	12.7	2.6	0.05	12.6	0.8	1.8	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_23	PF13476.1	gi|297621324|ref|YP_003709461.1|	-	0.048	13.9	3.3	0.12	12.7	2.3	1.9	1	1	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.21	gi|297621324|ref|YP_003709461.1|	-	0.051	13.0	0.0	0.24	10.8	0.0	1.9	2	0	0	2	2	2	0	Sigma-54	interaction	domain
ABC_ATPase	PF09818.4	gi|297621324|ref|YP_003709461.1|	-	0.051	12.1	0.1	5.9	5.3	0.0	2.1	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
AAA_33	PF13671.1	gi|297621324|ref|YP_003709461.1|	-	0.057	13.2	0.0	0.18	11.7	0.0	1.9	2	0	0	2	2	1	0	AAA	domain
DUF815	PF05673.8	gi|297621324|ref|YP_003709461.1|	-	0.062	12.2	0.1	0.17	10.7	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
KaiC	PF06745.8	gi|297621324|ref|YP_003709461.1|	-	0.076	12.1	0.5	0.17	11.0	0.1	1.8	2	0	0	2	2	2	0	KaiC
SbcCD_C	PF13558.1	gi|297621324|ref|YP_003709461.1|	-	0.094	12.6	0.3	0.49	10.3	0.2	2.0	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_17	PF13207.1	gi|297621324|ref|YP_003709461.1|	-	0.11	13.3	0.1	0.27	12.0	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
APS_kinase	PF01583.15	gi|297621324|ref|YP_003709461.1|	-	0.12	12.0	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
OpuAC	PF04069.7	gi|297621325|ref|YP_003709462.1|	-	2.5e-53	181.0	0.0	3.2e-53	180.7	0.0	1.1	1	0	0	1	1	1	1	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
BPD_transp_1	PF00528.17	gi|297621325|ref|YP_003709462.1|	-	2e-20	73.0	16.4	4.9e-20	71.8	11.5	1.5	1	1	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
LemA	PF04011.7	gi|297621326|ref|YP_003709463.1|	-	5.2e-61	205.0	1.2	5.8e-61	204.8	0.9	1.0	1	0	0	1	1	1	1	LemA	family
IncA	PF04156.9	gi|297621326|ref|YP_003709463.1|	-	2.3	7.7	5.5	13	5.3	3.8	2.0	1	1	0	1	1	1	0	IncA	protein
Peptidase_M48	PF01435.13	gi|297621327|ref|YP_003709464.1|	-	1.6e-34	119.4	0.0	2.2e-34	119.0	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|297621327|ref|YP_003709464.1|	-	0.0012	17.8	0.0	0.0022	16.9	0.0	1.5	1	0	0	1	1	1	1	BlaR1	peptidase	M56
Ilm1	PF10311.4	gi|297621327|ref|YP_003709464.1|	-	0.0058	16.1	0.5	0.013	15.0	0.1	1.8	2	0	0	2	2	2	1	Increased	loss	of	mitochondrial	DNA	protein	1
Peptidase_MA_2	PF13485.1	gi|297621327|ref|YP_003709464.1|	-	0.0097	15.9	0.0	0.022	14.7	0.0	1.6	1	0	0	1	1	1	1	Peptidase	MA	superfamily
DUF2243	PF10002.4	gi|297621327|ref|YP_003709464.1|	-	0.47	10.2	2.9	0.48	10.1	0.8	1.8	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2243)
DoxX	PF07681.7	gi|297621328|ref|YP_003709465.1|	-	3.5e-19	69.0	6.5	5.2e-19	68.4	4.5	1.3	1	0	0	1	1	1	1	DoxX
DoxX_2	PF13564.1	gi|297621328|ref|YP_003709465.1|	-	2.6e-07	30.5	2.7	3.2e-07	30.2	1.9	1.3	1	0	0	1	1	1	1	DoxX-like	family
DoxD	PF04173.8	gi|297621328|ref|YP_003709465.1|	-	3.9e-06	26.6	4.1	1.9e-05	24.4	0.8	2.3	1	1	0	2	2	2	1	TQO	small	subunit	DoxD
SURF4	PF02077.10	gi|297621328|ref|YP_003709465.1|	-	0.031	13.6	0.3	0.053	12.8	0.2	1.4	1	0	0	1	1	1	0	SURF4	family
DUF4225	PF13988.1	gi|297621328|ref|YP_003709465.1|	-	0.04	13.3	0.1	0.051	13.0	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4225)
FA_desaturase	PF00487.19	gi|297621328|ref|YP_003709465.1|	-	0.61	9.4	3.0	0.69	9.3	2.1	1.1	1	0	0	1	1	1	0	Fatty	acid	desaturase
GntP_permease	PF02447.11	gi|297621329|ref|YP_003709466.1|	-	0.059	11.8	0.9	0.064	11.7	0.6	1.0	1	0	0	1	1	1	0	GntP	family	permease
RseC_MucC	PF04246.7	gi|297621329|ref|YP_003709466.1|	-	1.1	8.7	4.3	1.4	8.4	3.0	1.0	1	0	0	1	1	1	0	Positive	regulator	of	sigma(E),	RseC/MucC
His_Phos_2	PF00328.17	gi|297621330|ref|YP_003709467.1|	-	0.012	14.9	0.2	0.024	14.0	0.1	1.5	1	0	0	1	1	1	0	Histidine	phosphatase	superfamily	(branch	2)
RRF_GI	PF12614.3	gi|297621330|ref|YP_003709467.1|	-	0.019	14.7	0.3	0.019	14.7	0.2	3.2	3	2	0	3	3	3	0	Ribosome	recycling	factor
PilJ	PF13675.1	gi|297621330|ref|YP_003709467.1|	-	0.034	14.4	5.8	1.9	8.8	0.2	3.9	3	1	1	4	4	4	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
NUC130_3NT	PF08158.7	gi|297621330|ref|YP_003709467.1|	-	0.089	13.0	0.6	5.4	7.3	0.0	3.6	3	0	0	3	3	3	0	NUC130/3NT	domain
MCM_N	PF14551.1	gi|297621330|ref|YP_003709467.1|	-	0.13	12.7	5.6	1.4	9.4	0.4	3.3	2	1	1	3	3	3	0	MCM	N-terminal	domain
YebG	PF07130.7	gi|297621330|ref|YP_003709467.1|	-	0.74	9.5	6.8	2	8.1	0.3	3.7	3	0	0	3	3	3	0	YebG	protein
DUF2935	PF11155.3	gi|297621330|ref|YP_003709467.1|	-	0.86	9.7	8.2	1.1	9.4	0.6	3.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF2935)
TMPIT	PF07851.8	gi|297621330|ref|YP_003709467.1|	-	0.86	8.6	5.2	8.6	5.3	0.2	2.4	2	0	0	2	2	2	0	TMPIT-like	protein
BMFP	PF04380.8	gi|297621330|ref|YP_003709467.1|	-	2	8.5	7.4	32	4.7	0.2	4.4	5	1	1	6	6	6	0	Membrane	fusogenic	activity
FlaC_arch	PF05377.6	gi|297621330|ref|YP_003709467.1|	-	2.1	8.3	6.6	12	5.9	0.0	5.0	6	0	0	6	6	6	0	Flagella	accessory	protein	C	(FlaC)
DASH_Dad3	PF08656.5	gi|297621330|ref|YP_003709467.1|	-	2.7	7.7	7.5	3.7	7.3	0.1	3.8	5	1	0	5	5	5	0	DASH	complex	subunit	Dad3
Vps51	PF08700.6	gi|297621330|ref|YP_003709467.1|	-	3.1	7.6	9.7	23	4.9	0.1	4.8	5	1	0	5	5	5	0	Vps51/Vps67
DivIC	PF04977.10	gi|297621330|ref|YP_003709467.1|	-	5.2	6.6	11.0	1.2	8.6	0.2	4.3	5	0	0	5	5	5	0	Septum	formation	initiator
DUF87	PF01935.12	gi|297621330|ref|YP_003709467.1|	-	5.9	6.6	9.1	0.79	9.4	0.9	2.6	2	1	1	3	3	3	0	Domain	of	unknown	function	DUF87
Cation_efflux	PF01545.16	gi|297621332|ref|YP_003709469.1|	-	2.2e-58	197.5	1.4	2.5e-58	197.3	1.0	1.0	1	0	0	1	1	1	1	Cation	efflux	family
CTP_transf_3	PF02348.14	gi|297621333|ref|YP_003709470.1|	-	5.2e-53	179.8	0.0	6.4e-53	179.5	0.0	1.0	1	0	0	1	1	1	1	Cytidylyltransferase
NTP_transf_3	PF12804.2	gi|297621333|ref|YP_003709470.1|	-	1.1e-07	32.0	0.0	1.6e-07	31.5	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CTP_synth_N	PF06418.9	gi|297621334|ref|YP_003709471.1|	-	1.2e-127	424.7	0.0	1.6e-127	424.3	0.0	1.2	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.23	gi|297621334|ref|YP_003709471.1|	-	7.2e-51	172.3	0.0	1.4e-50	171.4	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|297621334|ref|YP_003709471.1|	-	7.5e-12	45.1	0.0	5.6e-11	42.3	0.0	2.2	1	1	0	1	1	1	1	Peptidase	C26
CbiA	PF01656.18	gi|297621334|ref|YP_003709471.1|	-	6.2e-06	25.7	0.0	1.8e-05	24.2	0.0	1.7	2	0	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
NLE	PF08154.7	gi|297621334|ref|YP_003709471.1|	-	0.059	13.3	0.1	0.12	12.3	0.1	1.5	1	0	0	1	1	1	0	NLE	(NUC135)	domain
UPF0081	PF03652.10	gi|297621335|ref|YP_003709472.1|	-	2.7e-41	140.8	0.3	3.1e-41	140.6	0.2	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0081)
DUF965	PF06135.7	gi|297621335|ref|YP_003709472.1|	-	0.054	13.5	0.0	0.1	12.6	0.0	1.5	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF965)
DUF1649	PF07855.7	gi|297621335|ref|YP_003709472.1|	-	0.076	12.6	0.1	0.095	12.3	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1649)
EVE	PF01878.13	gi|297621336|ref|YP_003709473.1|	-	1e-52	177.9	0.1	1.1e-52	177.8	0.1	1.0	1	0	0	1	1	1	1	EVE	domain
GATase_4	PF13230.1	gi|297621337|ref|YP_003709474.1|	-	1.8e-24	85.8	0.4	6.9e-23	80.6	0.3	2.0	1	1	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.1	gi|297621337|ref|YP_003709474.1|	-	3.6e-15	56.0	0.0	7.2e-15	55.1	0.0	1.6	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|297621337|ref|YP_003709474.1|	-	1.4e-09	37.1	0.1	2.9e-09	36.0	0.0	1.5	2	0	0	2	2	2	1	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|297621337|ref|YP_003709474.1|	-	0.0031	17.2	0.0	0.0098	15.6	0.0	1.8	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
RimK	PF08443.6	gi|297621338|ref|YP_003709475.1|	-	8.6e-42	142.7	0.0	1.1e-41	142.4	0.0	1.1	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|297621338|ref|YP_003709475.1|	-	1.1e-15	57.2	0.0	4.6e-15	55.1	0.0	1.8	2	0	0	2	2	2	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|297621338|ref|YP_003709475.1|	-	2e-14	53.7	0.0	4.2e-14	52.6	0.0	1.5	2	0	0	2	2	2	1	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|297621338|ref|YP_003709475.1|	-	1.5e-07	31.4	0.0	2.6e-07	30.6	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_ST	PF14397.1	gi|297621338|ref|YP_003709475.1|	-	5.1e-06	25.7	0.5	0.00014	21.0	0.1	2.7	2	1	0	2	2	2	1	Sugar-transfer	associated	ATP-grasp
CPSase_L_D2	PF02786.12	gi|297621338|ref|YP_003709475.1|	-	6.7e-05	22.2	0.0	0.00018	20.8	0.0	1.8	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp	PF02222.17	gi|297621338|ref|YP_003709475.1|	-	9e-05	21.8	0.0	0.00019	20.8	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|297621338|ref|YP_003709475.1|	-	0.00011	21.0	0.0	0.00026	19.8	0.0	1.6	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
Synapsin_C	PF02750.9	gi|297621338|ref|YP_003709475.1|	-	0.00032	19.8	0.0	0.00046	19.3	0.0	1.2	1	0	0	1	1	1	1	Synapsin,	ATP	binding	domain
Dala_Dala_lig_C	PF07478.8	gi|297621338|ref|YP_003709475.1|	-	0.00048	19.5	0.1	0.029	13.7	0.1	2.1	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
TTL	PF03133.10	gi|297621338|ref|YP_003709475.1|	-	0.0016	17.4	0.1	1.2	7.9	0.0	2.3	2	0	0	2	2	2	2	Tubulin-tyrosine	ligase	family
ATPgrasp_YheCD	PF14398.1	gi|297621338|ref|YP_003709475.1|	-	0.032	13.0	0.0	2.9	6.6	0.0	2.3	2	0	0	2	2	2	0	YheC/D	like	ATP-grasp
Ins134_P3_kin	PF05770.6	gi|297621338|ref|YP_003709475.1|	-	0.055	12.4	0.1	13	4.7	0.0	2.8	1	1	0	2	2	2	0	Inositol	1,	3,	4-trisphosphate	5/6-kinase
GARS_A	PF01071.14	gi|297621338|ref|YP_003709475.1|	-	0.057	12.9	0.0	0.093	12.2	0.0	1.4	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
Transposase_mut	PF00872.13	gi|297621339|ref|YP_003709476.1|	-	6e-101	337.7	0.0	7.4e-101	337.4	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.4	gi|297621339|ref|YP_003709476.1|	-	1.2e-10	41.4	0.0	4.1e-10	39.6	0.0	1.9	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.1	gi|297621339|ref|YP_003709476.1|	-	0.0076	16.2	0.3	0.11	12.5	0.1	2.7	2	1	1	3	3	3	1	DDE	domain
HMG_CoA_synt_C	PF08540.5	gi|297621341|ref|YP_003709478.1|	-	1.5e-20	73.8	0.5	4.4e-10	39.5	0.1	2.1	1	1	1	2	2	2	2	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
HMG_CoA_synt_N	PF01154.12	gi|297621341|ref|YP_003709478.1|	-	1.1e-15	57.6	0.0	2.3e-15	56.5	0.0	1.5	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
Hjc	PF01870.13	gi|297621341|ref|YP_003709478.1|	-	0.051	13.1	0.0	0.14	11.7	0.0	1.7	1	0	0	1	1	1	0	Archaeal	holliday	junction	resolvase	(hjc)
FMN_dh	PF01070.13	gi|297621342|ref|YP_003709479.1|	-	4.2e-28	98.2	0.1	1.1e-17	63.9	0.1	2.1	1	1	0	2	2	2	2	FMN-dependent	dehydrogenase
IMPDH	PF00478.20	gi|297621342|ref|YP_003709479.1|	-	0.016	14.1	0.5	0.16	10.7	0.1	2.2	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
Glu_synthase	PF01645.12	gi|297621342|ref|YP_003709479.1|	-	0.019	13.8	0.1	0.036	12.9	0.0	1.4	1	0	0	1	1	1	0	Conserved	region	in	glutamate	synthase
DUF4573	PF15140.1	gi|297621342|ref|YP_003709479.1|	-	0.2	11.2	0.0	0.29	10.7	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4573)
HMG-CoA_red	PF00368.13	gi|297621343|ref|YP_003709480.1|	-	2.7e-72	243.4	0.0	3.3e-72	243.2	0.0	1.0	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
GHMP_kinases_N	PF00288.21	gi|297621344|ref|YP_003709481.1|	-	1.4e-05	25.0	3.7	3.4e-05	23.8	2.6	1.7	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_N	PF00288.21	gi|297621345|ref|YP_003709482.1|	-	1.2e-05	25.2	1.1	2.7e-05	24.1	0.5	1.8	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|297621346|ref|YP_003709483.1|	-	3.9e-14	52.6	0.9	6.7e-14	51.8	0.1	1.9	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.21	gi|297621346|ref|YP_003709483.1|	-	1.2e-11	44.5	0.0	3.6e-11	42.9	0.0	1.8	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
SMC_hinge	PF06470.8	gi|297621346|ref|YP_003709483.1|	-	0.16	11.9	0.0	0.93	9.4	0.0	2.0	2	0	0	2	2	2	0	SMC	proteins	Flexible	Hinge	Domain
ATPase_gene1	PF09527.5	gi|297621347|ref|YP_003709484.1|	-	2.6e-12	46.3	1.1	3.2e-12	46.0	0.8	1.1	1	0	0	1	1	1	1	Putative	F0F1-ATPase	subunit	(ATPase_gene1)
BacA	PF02673.13	gi|297621347|ref|YP_003709484.1|	-	0.022	13.9	0.0	0.023	13.8	0.0	1.0	1	0	0	1	1	1	0	Bacitracin	resistance	protein	BacA
DUF63	PF01889.12	gi|297621347|ref|YP_003709484.1|	-	0.025	14.6	0.7	0.028	14.4	0.5	1.0	1	0	0	1	1	1	0	Membrane	protein	of	unknown	function	DUF63
DUF2142	PF09913.4	gi|297621347|ref|YP_003709484.1|	-	0.031	12.9	0.1	0.034	12.8	0.1	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2142)
TauE	PF01925.14	gi|297621347|ref|YP_003709484.1|	-	0.038	13.4	0.9	0.045	13.1	0.6	1.1	1	0	0	1	1	1	0	Sulfite	exporter	TauE/SafE
ATP-synt_A	PF00119.15	gi|297621348|ref|YP_003709485.1|	-	1.3e-36	126.1	18.3	1.8e-36	125.7	12.7	1.1	1	0	0	1	1	1	1	ATP	synthase	A	chain
ATP-synt_C	PF00137.16	gi|297621349|ref|YP_003709486.1|	-	8.7e-18	63.9	14.1	9.6e-18	63.8	9.8	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	C
FtsX	PF02687.16	gi|297621349|ref|YP_003709486.1|	-	0.53	10.0	6.4	0.61	9.8	4.4	1.1	1	0	0	1	1	1	0	FtsX-like	permease	family
ATP-synt_B	PF00430.13	gi|297621350|ref|YP_003709487.1|	-	5.2e-18	65.1	15.0	5.2e-18	65.1	10.4	1.4	2	0	0	2	2	2	1	ATP	synthase	B/B'	CF(0)
Sipho_Gp157	PF05565.6	gi|297621350|ref|YP_003709487.1|	-	0.0014	18.2	12.0	0.0018	17.8	8.3	1.1	1	0	0	1	1	1	1	Siphovirus	Gp157
FtsK_SpoIIIE	PF01580.13	gi|297621350|ref|YP_003709487.1|	-	0.022	14.2	0.5	0.031	13.7	0.3	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
Mt_ATP-synt_B	PF05405.9	gi|297621350|ref|YP_003709487.1|	-	0.032	13.6	11.5	0.041	13.3	8.0	1.1	1	0	0	1	1	1	0	Mitochondrial	ATP	synthase	B	chain	precursor	(ATP-synt_B)
Cation_efflux	PF01545.16	gi|297621350|ref|YP_003709487.1|	-	0.14	11.1	0.9	0.21	10.6	0.6	1.3	1	0	0	1	1	1	0	Cation	efflux	family
FliH	PF02108.11	gi|297621350|ref|YP_003709487.1|	-	0.42	10.5	8.0	0.066	13.0	1.3	2.2	1	1	1	2	2	2	0	Flagellar	assembly	protein	FliH
UPF0184	PF03670.8	gi|297621350|ref|YP_003709487.1|	-	1.2	9.3	3.9	5.4	7.2	2.7	2.0	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0184)
OSCP	PF00213.13	gi|297621351|ref|YP_003709488.1|	-	5.4e-31	107.7	6.2	6.1e-31	107.5	4.3	1.0	1	0	0	1	1	1	1	ATP	synthase	delta	(OSCP)	subunit
Hydrolase	PF00702.21	gi|297621351|ref|YP_003709488.1|	-	0.074	13.4	0.0	0.081	13.3	0.0	1.1	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Sec-ASP3	PF15432.1	gi|297621351|ref|YP_003709488.1|	-	0.22	11.4	2.8	0.3	11.0	0.6	1.9	1	1	1	2	2	2	0	Accessory	Sec	secretory	system	ASP3
ATP-synt_ab	PF00006.20	gi|297621352|ref|YP_003709489.1|	-	4.7e-67	225.6	0.0	7.1e-67	225.0	0.0	1.3	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|297621352|ref|YP_003709489.1|	-	5.2e-18	65.5	1.8	1.2e-17	64.3	1.3	1.6	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|297621352|ref|YP_003709489.1|	-	7.4e-15	54.9	0.7	1.5e-14	53.9	0.5	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
KaiC	PF06745.8	gi|297621352|ref|YP_003709489.1|	-	8.8e-05	21.7	0.3	0.00023	20.3	0.2	1.7	1	0	0	1	1	1	1	KaiC
AAA_14	PF13173.1	gi|297621352|ref|YP_003709489.1|	-	0.0064	16.4	0.1	0.018	14.9	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
HAS-barrel	PF09378.5	gi|297621352|ref|YP_003709489.1|	-	0.0077	16.1	1.0	0.017	15.0	0.7	1.6	1	0	0	1	1	1	1	HAS	barrel	domain
Arch_ATPase	PF01637.13	gi|297621352|ref|YP_003709489.1|	-	0.015	15.0	0.0	0.036	13.7	0.0	1.7	1	0	0	1	1	1	0	Archaeal	ATPase
MobB	PF03205.9	gi|297621352|ref|YP_003709489.1|	-	0.029	14.0	0.1	0.074	12.7	0.0	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
XPC-binding	PF09280.6	gi|297621352|ref|YP_003709489.1|	-	0.032	13.6	0.1	0.11	12.0	0.0	1.9	2	0	0	2	2	2	0	XPC-binding	domain
ATP-synt	PF00231.14	gi|297621353|ref|YP_003709490.1|	-	1.1e-76	258.0	3.6	1.2e-76	257.8	2.5	1.0	1	0	0	1	1	1	1	ATP	synthase
ATP-synt_ab	PF00006.20	gi|297621354|ref|YP_003709491.1|	-	1e-65	221.2	0.0	1.4e-65	220.7	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|297621354|ref|YP_003709491.1|	-	2.6e-23	82.6	0.6	4.3e-23	81.9	0.4	1.4	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|297621354|ref|YP_003709491.1|	-	2e-20	72.7	0.6	4.1e-20	71.7	0.2	1.8	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
AAA_25	PF13481.1	gi|297621354|ref|YP_003709491.1|	-	0.00016	21.1	0.0	0.00035	20.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|297621354|ref|YP_003709491.1|	-	0.01	15.0	0.1	0.019	14.1	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
KaiC	PF06745.8	gi|297621354|ref|YP_003709491.1|	-	0.02	13.9	0.3	0.039	13.0	0.2	1.4	1	0	0	1	1	1	0	KaiC
AAA	PF00004.24	gi|297621354|ref|YP_003709491.1|	-	0.065	13.4	0.1	0.62	10.2	0.0	2.3	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|297621354|ref|YP_003709491.1|	-	0.1	12.5	0.6	0.62	10.0	0.1	2.2	2	0	0	2	2	2	0	AAA	ATPase	domain
ABC_tran	PF00005.22	gi|297621354|ref|YP_003709491.1|	-	0.14	12.4	0.1	0.31	11.3	0.0	1.5	1	0	0	1	1	1	0	ABC	transporter
NB-ARC	PF00931.17	gi|297621354|ref|YP_003709491.1|	-	0.25	10.1	0.8	0.52	9.1	0.1	1.7	2	0	0	2	2	2	0	NB-ARC	domain
ATP-synt_DE_N	PF02823.11	gi|297621355|ref|YP_003709492.1|	-	1.1e-23	82.7	0.0	1.8e-23	82.0	0.0	1.3	1	0	0	1	1	1	1	ATP	synthase,	Delta/Epsilon	chain,	beta-sandwich	domain
ATP-synt_DE	PF00401.15	gi|297621355|ref|YP_003709492.1|	-	1.2e-08	34.6	1.5	1.7e-08	34.2	1.0	1.2	1	0	0	1	1	1	1	ATP	synthase,	Delta/Epsilon	chain,	long	alpha-helix	domain
UBA	PF00627.26	gi|297621355|ref|YP_003709492.1|	-	0.1	12.4	0.2	1.7	8.5	0.0	2.2	2	0	0	2	2	2	0	UBA/TS-N	domain
RasGEF	PF00617.14	gi|297621357|ref|YP_003709494.1|	-	8e-07	28.9	5.5	1.3e-06	28.3	0.3	3.2	3	0	0	3	3	3	1	RasGEF	domain
DUF3993	PF13158.1	gi|297621357|ref|YP_003709494.1|	-	0.003	17.3	0.8	0.32	10.8	0.1	3.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3993)
DHHA2	PF02833.9	gi|297621357|ref|YP_003709494.1|	-	0.012	15.8	4.5	2	8.6	0.6	2.9	2	0	0	2	2	2	0	DHHA2	domain
G6PD_C	PF02781.11	gi|297621358|ref|YP_003709495.1|	-	2.6e-108	361.3	0.0	3.5e-108	360.9	0.0	1.1	1	0	0	1	1	1	1	Glucose-6-phosphate	dehydrogenase,	C-terminal	domain
G6PD_N	PF00479.17	gi|297621358|ref|YP_003709495.1|	-	1.9e-67	227.0	0.2	3e-67	226.3	0.1	1.3	1	0	0	1	1	1	1	Glucose-6-phosphate	dehydrogenase,	NAD	binding	domain
OpcA_G6PD_assem	PF10128.4	gi|297621359|ref|YP_003709496.1|	-	8.4e-32	110.1	0.0	9.7e-32	109.9	0.0	1.1	1	0	0	1	1	1	1	Glucose-6-phosphate	dehydrogenase	subunit
Glucosamine_iso	PF01182.15	gi|297621360|ref|YP_003709497.1|	-	1.5e-59	201.0	0.0	1.8e-59	200.8	0.0	1.1	1	0	0	1	1	1	1	Glucosamine-6-phosphate	isomerases/6-phosphogluconolactonase
PseudoU_synth_2	PF00849.17	gi|297621361|ref|YP_003709498.1|	-	1.9e-15	57.0	0.0	2.7e-14	53.3	0.0	2.0	1	1	0	1	1	1	1	RNA	pseudouridylate	synthase
S4	PF01479.20	gi|297621361|ref|YP_003709498.1|	-	3.5e-09	35.9	1.2	8.6e-09	34.6	0.0	2.3	3	0	0	3	3	3	1	S4	domain
HATPase_c	PF02518.21	gi|297621362|ref|YP_003709499.1|	-	6.2e-31	106.3	0.1	1.2e-30	105.4	0.1	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_4	PF08448.5	gi|297621362|ref|YP_003709499.1|	-	3.3e-27	94.6	0.0	9.9e-18	64.1	0.0	2.6	2	0	0	2	2	2	2	PAS	fold
PAS_9	PF13426.1	gi|297621362|ref|YP_003709499.1|	-	1e-26	93.3	0.2	3.2e-14	53.1	0.0	2.6	2	0	0	2	2	2	2	PAS	domain
PAS	PF00989.19	gi|297621362|ref|YP_003709499.1|	-	8.6e-21	73.8	0.0	7.3e-12	45.0	0.0	2.8	2	0	0	2	2	2	2	PAS	fold
HisKA	PF00512.20	gi|297621362|ref|YP_003709499.1|	-	1.2e-18	66.8	0.0	1.2e-18	66.8	0.0	2.7	3	0	0	3	3	3	1	His	Kinase	A	(phospho-acceptor)	domain
CHASE	PF03924.8	gi|297621362|ref|YP_003709499.1|	-	4.8e-16	58.5	0.0	9.3e-16	57.6	0.0	1.4	1	0	0	1	1	1	1	CHASE	domain
PAS_7	PF12860.2	gi|297621362|ref|YP_003709499.1|	-	2.2e-09	37.3	0.2	1.9e-05	24.6	0.0	3.1	3	0	0	3	3	3	2	PAS	fold
PAS_8	PF13188.1	gi|297621362|ref|YP_003709499.1|	-	1.2e-08	34.5	0.0	0.0076	16.0	0.0	2.8	2	0	0	2	2	2	2	PAS	domain
HATPase_c_3	PF13589.1	gi|297621362|ref|YP_003709499.1|	-	0.0016	18.0	0.0	0.0034	17.0	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_10	PF13596.1	gi|297621362|ref|YP_003709499.1|	-	0.0018	18.5	0.2	0.028	14.6	0.0	2.5	2	0	0	2	2	2	1	PAS	domain
Response_reg	PF00072.19	gi|297621363|ref|YP_003709500.1|	-	2.4e-29	101.6	0.4	2.7e-29	101.4	0.3	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
Ribosomal_S3Ae	PF01015.13	gi|297621363|ref|YP_003709500.1|	-	0.079	12.2	0.0	0.12	11.6	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	S3Ae	family
Peptidase_M22	PF00814.20	gi|297621364|ref|YP_003709501.1|	-	8.3e-87	291.0	0.0	9.4e-87	290.8	0.0	1.0	1	0	0	1	1	1	1	Glycoprotease	family
YycC	PF14174.1	gi|297621364|ref|YP_003709501.1|	-	0.11	12.1	0.0	0.22	11.1	0.0	1.5	1	0	0	1	1	1	0	YycC-like	protein
Ribosomal_L33	PF00471.15	gi|297621365|ref|YP_003709502.1|	-	3.9e-14	52.6	5.7	4.4e-14	52.4	3.9	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L33
FtsX	PF02687.16	gi|297621366|ref|YP_003709503.1|	-	4.9e-15	55.3	15.4	4.9e-15	55.3	10.7	2.2	2	0	0	2	2	2	1	FtsX-like	permease	family
MacB_PCD	PF12704.2	gi|297621366|ref|YP_003709503.1|	-	0.0016	18.0	2.2	0.16	11.4	0.0	3.3	3	0	0	3	3	3	1	MacB-like	periplasmic	core	domain
Yip1	PF04893.12	gi|297621366|ref|YP_003709503.1|	-	1.3	8.5	17.9	1.6	8.1	5.2	2.4	2	1	0	2	2	2	0	Yip1	domain
ABC_tran	PF00005.22	gi|297621367|ref|YP_003709504.1|	-	3e-28	98.8	0.0	4.1e-28	98.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297621367|ref|YP_003709504.1|	-	0.00023	21.2	0.1	0.008	16.1	0.0	2.1	1	1	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|297621367|ref|YP_003709504.1|	-	0.0016	17.5	0.2	0.48	9.4	0.0	2.1	1	1	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|297621367|ref|YP_003709504.1|	-	0.0018	17.5	0.2	0.013	14.7	0.2	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|297621367|ref|YP_003709504.1|	-	0.0049	16.3	0.1	0.0093	15.4	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|297621367|ref|YP_003709504.1|	-	0.0058	15.8	0.0	0.0089	15.2	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
SbcCD_C	PF13558.1	gi|297621367|ref|YP_003709504.1|	-	0.013	15.4	0.0	0.048	13.5	0.0	1.9	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
NTPase_1	PF03266.10	gi|297621367|ref|YP_003709504.1|	-	0.026	14.2	0.0	0.92	9.1	0.0	2.1	2	0	0	2	2	2	0	NTPase
Methyltransf_28	PF02636.12	gi|297621368|ref|YP_003709505.1|	-	0.0047	16.3	0.0	0.029	13.7	0.0	2.0	1	1	0	1	1	1	1	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
APC8	PF04049.8	gi|297621368|ref|YP_003709505.1|	-	0.03	14.0	0.3	0.03	14.0	0.2	1.7	2	0	0	2	2	2	0	Anaphase	promoting	complex	subunit	8	/	Cdc23
Thioredoxin_4	PF13462.1	gi|297621369|ref|YP_003709506.1|	-	1.5e-13	51.0	0.1	2.4e-13	50.4	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|297621369|ref|YP_003709506.1|	-	1.1e-10	41.7	0.2	2.6e-10	40.4	0.1	1.6	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin	PF00085.15	gi|297621369|ref|YP_003709506.1|	-	4.1e-07	29.6	0.4	0.018	14.7	0.0	2.4	2	0	0	2	2	2	2	Thioredoxin
Thioredoxin_5	PF13743.1	gi|297621369|ref|YP_003709506.1|	-	5.7e-05	22.7	0.1	0.17	11.4	0.0	2.4	1	1	0	2	2	2	2	Thioredoxin
VKOR	PF07884.9	gi|297621369|ref|YP_003709506.1|	-	6.5e-05	22.8	6.6	6.5e-05	22.8	4.6	1.8	1	1	0	1	1	1	1	Vitamin	K	epoxide	reductase	family
DSBA	PF01323.15	gi|297621369|ref|YP_003709506.1|	-	0.00019	21.0	0.1	0.24	10.9	0.0	2.5	1	1	1	2	2	2	2	DSBA-like	thioredoxin	domain
Thioredoxin_3	PF13192.1	gi|297621369|ref|YP_003709506.1|	-	0.00019	21.1	0.4	0.35	10.7	0.0	2.7	3	0	0	3	3	3	2	Thioredoxin	domain
Thioredoxin_8	PF13905.1	gi|297621369|ref|YP_003709506.1|	-	0.00083	19.4	0.2	0.058	13.5	0.1	2.4	1	1	0	1	1	1	1	Thioredoxin-like
DUF2976	PF11190.3	gi|297621369|ref|YP_003709506.1|	-	0.0029	17.1	2.8	0.14	11.6	0.5	2.7	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF2976)
DUF953	PF06110.6	gi|297621369|ref|YP_003709506.1|	-	0.024	14.0	1.4	7.2	6.0	0.0	3.0	3	1	0	3	3	3	0	Eukaryotic	protein	of	unknown	function	(DUF953)
TraF	PF13728.1	gi|297621369|ref|YP_003709506.1|	-	0.076	12.4	0.0	5.8	6.3	0.0	2.2	2	0	0	2	2	2	0	F	plasmid	transfer	operon	protein
DUF4396	PF14342.1	gi|297621369|ref|YP_003709506.1|	-	0.087	12.9	2.2	2.6	8.1	0.5	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4396)
DUF4082	PF13313.1	gi|297621369|ref|YP_003709506.1|	-	0.1	12.0	0.0	1.2	8.5	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4082)
DUF441	PF04284.8	gi|297621369|ref|YP_003709506.1|	-	0.3	10.9	4.4	0.19	11.5	1.2	2.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF441)
PALP	PF00291.20	gi|297621370|ref|YP_003709507.1|	-	7.1e-62	209.3	0.0	8e-62	209.2	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Cys_Met_Meta_PP	PF01053.15	gi|297621371|ref|YP_003709508.1|	-	1.4e-137	458.1	0.0	1.5e-137	457.9	0.0	1.0	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.16	gi|297621371|ref|YP_003709508.1|	-	4.7e-08	32.3	0.0	6.4e-08	31.9	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|297621371|ref|YP_003709508.1|	-	0.12	11.3	0.0	0.87	8.5	0.0	2.0	2	0	0	2	2	2	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Glyco_transf_20	PF00982.16	gi|297621372|ref|YP_003709509.1|	-	3.5e-128	428.0	1.2	4.9e-128	427.5	0.8	1.1	1	0	0	1	1	1	1	Glycosyltransferase	family	20
Gemini_AL2	PF01440.11	gi|297621372|ref|YP_003709509.1|	-	0.023	14.8	0.0	0.046	13.8	0.0	1.4	1	0	0	1	1	1	0	Geminivirus	AL2	protein
Aminotran_1_2	PF00155.16	gi|297621373|ref|YP_003709510.1|	-	8.7e-71	238.7	0.0	9.9e-71	238.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|297621373|ref|YP_003709510.1|	-	0.00012	20.9	0.0	0.00025	19.9	0.0	1.5	1	1	0	1	1	1	1	Aminotransferase	class-V
SHMT	PF00464.14	gi|297621373|ref|YP_003709510.1|	-	0.00018	20.0	0.0	0.00039	18.9	0.0	1.5	2	0	0	2	2	2	1	Serine	hydroxymethyltransferase
Met_gamma_lyase	PF06838.6	gi|297621373|ref|YP_003709510.1|	-	0.00026	19.3	0.0	0.0004	18.7	0.0	1.3	1	0	0	1	1	1	1	Methionine	gamma-lyase
Beta_elim_lyase	PF01212.16	gi|297621373|ref|YP_003709510.1|	-	0.041	13.0	0.0	0.06	12.4	0.0	1.4	1	1	0	1	1	1	0	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.12	gi|297621373|ref|YP_003709510.1|	-	0.24	10.4	1.1	0.87	8.5	0.7	1.9	1	1	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
ADH_N	PF08240.7	gi|297621374|ref|YP_003709511.1|	-	6.4e-34	116.0	1.2	1.1e-33	115.2	0.8	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|297621374|ref|YP_003709511.1|	-	2.3e-23	82.1	0.1	3.3e-23	81.6	0.1	1.2	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
Pyr_redox_3	PF13738.1	gi|297621374|ref|YP_003709511.1|	-	0.024	14.6	0.4	0.036	14.1	0.2	1.2	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|297621374|ref|YP_003709511.1|	-	0.039	13.0	0.1	0.059	12.4	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|297621374|ref|YP_003709511.1|	-	0.049	13.2	0.1	0.078	12.5	0.1	1.2	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
ADH_zinc_N_2	PF13602.1	gi|297621374|ref|YP_003709511.1|	-	0.052	14.4	0.0	0.15	12.9	0.0	1.8	1	1	1	2	2	2	0	Zinc-binding	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|297621374|ref|YP_003709511.1|	-	0.054	12.6	0.0	0.086	11.9	0.0	1.2	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
MTS	PF05175.9	gi|297621374|ref|YP_003709511.1|	-	0.069	12.5	0.2	0.11	11.8	0.2	1.2	1	0	0	1	1	1	0	Methyltransferase	small	domain
Shikimate_DH	PF01488.15	gi|297621374|ref|YP_003709511.1|	-	0.077	13.0	0.3	0.12	12.4	0.2	1.3	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Methyltransf_16	PF10294.4	gi|297621374|ref|YP_003709511.1|	-	0.093	12.1	0.0	0.15	11.4	0.0	1.3	1	0	0	1	1	1	0	Putative	methyltransferase
NADH_4Fe-4S	PF10589.4	gi|297621374|ref|YP_003709511.1|	-	0.52	9.5	2.5	1.4	8.1	1.7	1.7	1	0	0	1	1	1	0	NADH-ubiquinone	oxidoreductase-F	iron-sulfur	binding	region
ACT	PF01842.20	gi|297621376|ref|YP_003709513.1|	-	4.1e-05	22.9	0.0	0.046	13.2	0.0	2.4	2	1	0	2	2	2	2	ACT	domain
ACT_4	PF13291.1	gi|297621376|ref|YP_003709513.1|	-	0.0073	16.6	0.0	3.2	8.1	0.0	2.1	2	0	0	2	2	2	2	ACT	domain
CGI-121	PF08617.5	gi|297621376|ref|YP_003709513.1|	-	0.085	12.5	0.0	0.11	12.1	0.0	1.1	1	0	0	1	1	1	0	Kinase	binding	protein	CGI-121
PduV-EutP	PF10662.4	gi|297621376|ref|YP_003709513.1|	-	0.13	11.7	0.0	0.21	11.0	0.0	1.3	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
E1-E2_ATPase	PF00122.15	gi|297621377|ref|YP_003709514.1|	-	2e-44	151.3	3.8	2.5e-44	151.0	0.1	2.2	2	0	0	2	2	2	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|297621377|ref|YP_003709514.1|	-	3e-22	80.1	0.0	5.5e-22	79.2	0.0	1.5	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|297621377|ref|YP_003709514.1|	-	6.2e-13	49.3	0.0	2.9e-12	47.1	0.0	2.1	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.21	gi|297621377|ref|YP_003709514.1|	-	1.3e-07	31.6	0.9	1.6e-06	28.1	0.0	3.0	3	0	0	3	3	3	1	Heavy-metal-associated	domain
ATPase-cat_bd	PF12156.3	gi|297621377|ref|YP_003709514.1|	-	3.5e-05	24.2	4.1	5.2e-05	23.6	1.3	2.1	1	1	0	2	2	2	1	Putative	metal-binding	domain	of	cation	transport	ATPase
WD40	PF00400.27	gi|297621378|ref|YP_003709515.1|	-	1.1e-16	59.9	8.5	0.00023	20.9	0.2	5.9	6	0	0	6	6	6	4	WD	domain,	G-beta	repeat
F-box-like	PF12937.2	gi|297621378|ref|YP_003709515.1|	-	7.2e-11	41.6	1.1	2.5e-10	39.9	0.8	1.9	1	0	0	1	1	1	1	F-box-like
F-box	PF00646.28	gi|297621378|ref|YP_003709515.1|	-	2.2e-06	27.1	0.7	4.8e-06	26.0	0.5	1.6	1	0	0	1	1	1	1	F-box	domain
Pep_deformylase	PF01327.16	gi|297621379|ref|YP_003709516.1|	-	3.5e-51	172.6	0.0	4e-51	172.5	0.0	1.0	1	0	0	1	1	1	1	Polypeptide	deformylase
Arch_fla_DE	PF04659.8	gi|297621379|ref|YP_003709516.1|	-	0.15	11.8	0.0	0.54	10.1	0.0	1.8	2	0	0	2	2	2	0	Archaeal	flagella	protein
SecG	PF03840.9	gi|297621380|ref|YP_003709517.1|	-	1.4e-19	69.5	6.4	1.6e-19	69.3	4.5	1.1	1	0	0	1	1	1	1	Preprotein	translocase	SecG	subunit
DUF4131	PF13567.1	gi|297621380|ref|YP_003709517.1|	-	0.16	11.3	0.6	0.19	11.1	0.4	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
Cytochrome-c551	PF10643.4	gi|297621380|ref|YP_003709517.1|	-	0.44	9.7	3.5	0.15	11.3	0.5	1.6	1	1	1	2	2	2	0	Photosystem	P840	reaction-centre	cytochrome	c-551
TIM	PF00121.13	gi|297621381|ref|YP_003709518.1|	-	1.6e-89	299.1	0.0	1.8e-89	299.0	0.0	1.0	1	0	0	1	1	1	1	Triosephosphate	isomerase
Exonuc_VII_L	PF02601.10	gi|297621382|ref|YP_003709519.1|	-	3.4e-78	263.0	0.1	4.4e-78	262.6	0.1	1.1	1	0	0	1	1	1	1	Exonuclease	VII,	large	subunit
tRNA_anti_2	PF13742.1	gi|297621382|ref|YP_003709519.1|	-	2.3e-31	107.6	0.0	4.9e-31	106.5	0.0	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA_anti-codon	PF01336.20	gi|297621382|ref|YP_003709519.1|	-	1.6e-08	34.2	0.0	4.2e-08	32.9	0.0	1.8	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
Exonuc_VII_S	PF02609.11	gi|297621383|ref|YP_003709520.1|	-	1.6e-17	62.9	4.5	2.3e-17	62.5	3.1	1.2	1	0	0	1	1	1	1	Exonuclease	VII	small	subunit
TBCA	PF02970.11	gi|297621383|ref|YP_003709520.1|	-	0.0034	17.4	0.5	0.0038	17.2	0.4	1.1	1	0	0	1	1	1	1	Tubulin	binding	cofactor	A
GAS	PF13851.1	gi|297621383|ref|YP_003709520.1|	-	0.041	13.0	1.4	0.045	12.9	1.0	1.0	1	0	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
DUF498	PF04430.9	gi|297621383|ref|YP_003709520.1|	-	0.062	12.8	0.0	0.071	12.6	0.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF498/DUF598)
HR1	PF02185.11	gi|297621383|ref|YP_003709520.1|	-	0.065	12.9	1.1	0.13	12.0	0.8	1.5	1	1	0	1	1	1	0	Hr1	repeat
Phe_tRNA-synt_N	PF02912.13	gi|297621383|ref|YP_003709520.1|	-	0.069	12.8	0.8	0.11	12.1	0.1	1.6	2	0	0	2	2	2	0	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
DUF3456	PF11938.3	gi|297621383|ref|YP_003709520.1|	-	0.12	12.4	0.3	0.14	12.1	0.2	1.2	1	0	0	1	1	1	0	TLR4	regulator	and	MIR-interacting	MSAP
NAD_kinase	PF01513.16	gi|297621384|ref|YP_003709521.1|	-	1.7e-53	181.2	0.1	2.1e-53	180.9	0.0	1.1	1	0	0	1	1	1	1	ATP-NAD	kinase
LPAM_1	PF08139.7	gi|297621386|ref|YP_003709523.1|	-	1.1	9.5	3.4	1.7	8.9	2.4	1.4	1	0	0	1	1	1	0	Prokaryotic	membrane	lipoprotein	lipid	attachment	site
DUF11	PF01345.13	gi|297621388|ref|YP_003709525.1|	-	8e-32	109.1	12.5	2.3e-13	49.9	0.0	5.4	5	0	0	5	5	5	3	Domain	of	unknown	function	DUF11
CARDB	PF07705.6	gi|297621388|ref|YP_003709525.1|	-	4.5e-13	49.1	0.2	3.6e-06	26.9	0.1	3.4	3	0	0	3	3	3	2	CARDB
NPCBM_assoc	PF10633.4	gi|297621388|ref|YP_003709525.1|	-	2.6e-09	36.9	2.2	0.17	11.9	0.1	4.3	3	1	0	3	3	3	3	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
Chlam_OMP6	PF03504.8	gi|297621388|ref|YP_003709525.1|	-	2.8e-08	33.9	14.5	6.5e-05	23.1	0.1	4.1	4	0	0	4	4	4	2	Chlamydia	cysteine-rich	outer	membrane	protein	6
TRAP_beta	PF05753.9	gi|297621388|ref|YP_003709525.1|	-	9.5e-08	31.3	0.0	0.0027	16.8	0.0	2.8	3	0	0	3	3	3	2	Translocon-associated	protein	beta	(TRAPB)
Transglut_C	PF00927.17	gi|297621388|ref|YP_003709525.1|	-	5.4e-07	29.6	0.3	0.00073	19.5	0.1	3.7	4	0	0	4	4	4	1	Transglutaminase	family,	C-terminal	ig	like	domain
DUF2393	PF09624.5	gi|297621388|ref|YP_003709525.1|	-	0.006	16.1	0.2	1.4	8.4	0.1	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF2393)
Methyltransf_31	PF13847.1	gi|297621389|ref|YP_003709526.1|	-	4.5e-16	58.7	0.0	6e-16	58.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297621389|ref|YP_003709526.1|	-	5e-16	59.2	0.0	9.3e-16	58.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297621389|ref|YP_003709526.1|	-	1.9e-12	47.3	0.0	3.9e-12	46.3	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297621389|ref|YP_003709526.1|	-	5e-10	39.3	0.0	1.1e-09	38.2	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297621389|ref|YP_003709526.1|	-	1.3e-09	38.4	0.0	2.1e-09	37.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297621389|ref|YP_003709526.1|	-	6.6e-09	36.1	0.0	1e-08	35.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|297621389|ref|YP_003709526.1|	-	3.7e-08	32.7	0.0	4e-07	29.3	0.0	2.2	2	1	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_26	PF13659.1	gi|297621389|ref|YP_003709526.1|	-	5.4e-07	29.6	0.0	8.7e-07	28.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|297621389|ref|YP_003709526.1|	-	5.9e-06	25.9	0.0	7.4e-06	25.6	0.0	1.3	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
TehB	PF03848.9	gi|297621389|ref|YP_003709526.1|	-	8.1e-06	25.1	0.0	1.1e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
MTS	PF05175.9	gi|297621389|ref|YP_003709526.1|	-	1.3e-05	24.6	0.0	2e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_32	PF13679.1	gi|297621389|ref|YP_003709526.1|	-	0.0013	18.4	0.0	0.0019	17.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
TPMT	PF05724.6	gi|297621389|ref|YP_003709526.1|	-	0.0017	17.8	0.0	0.0039	16.6	0.0	1.7	2	0	0	2	2	2	1	Thiopurine	S-methyltransferase	(TPMT)
NodS	PF05401.6	gi|297621389|ref|YP_003709526.1|	-	0.0057	16.0	0.0	0.01	15.2	0.0	1.4	2	0	0	2	2	2	1	Nodulation	protein	S	(NodS)
RrnaAD	PF00398.15	gi|297621389|ref|YP_003709526.1|	-	0.039	12.9	0.0	0.059	12.3	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
UPF0020	PF01170.13	gi|297621389|ref|YP_003709526.1|	-	0.072	12.6	0.0	0.12	11.9	0.0	1.3	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
PrmA	PF06325.8	gi|297621389|ref|YP_003709526.1|	-	0.089	11.8	0.0	0.14	11.2	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
FmrO	PF07091.6	gi|297621389|ref|YP_003709526.1|	-	0.11	11.4	0.0	0.21	10.5	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
UDPG_MGDP_dh_N	PF03721.9	gi|297621389|ref|YP_003709526.1|	-	0.14	11.4	0.0	0.23	10.8	0.0	1.2	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
SAM_1	PF00536.25	gi|297621390|ref|YP_003709527.1|	-	0.13	12.4	0.1	0.29	11.3	0.1	1.5	2	0	0	2	2	2	0	SAM	domain	(Sterile	alpha	motif)
Maf	PF02545.9	gi|297621391|ref|YP_003709528.1|	-	6e-60	201.7	0.0	6.7e-60	201.5	0.0	1.0	1	0	0	1	1	1	1	Maf-like	protein
HEAT_2	PF13646.1	gi|297621392|ref|YP_003709529.1|	-	1.3e-17	63.8	19.1	2.2e-05	24.6	0.8	6.3	4	2	2	6	6	6	5	HEAT	repeats
HEAT_PBS	PF03130.11	gi|297621392|ref|YP_003709529.1|	-	0.0001	22.4	14.1	3.7	8.2	0.1	6.0	5	0	0	5	5	5	4	PBS	lyase	HEAT-like	repeat
UDPG_MGDP_dh_N	PF03721.9	gi|297621394|ref|YP_003709531.1|	-	9.5e-63	210.9	0.4	1.8e-62	210.0	0.2	1.5	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh	PF00984.14	gi|297621394|ref|YP_003709531.1|	-	5.8e-32	109.7	0.0	1.2e-31	108.8	0.0	1.5	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.10	gi|297621394|ref|YP_003709531.1|	-	3.7e-28	97.7	0.0	2.6e-26	91.8	0.0	2.6	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|297621394|ref|YP_003709531.1|	-	1.5e-05	24.7	0.0	5.7e-05	22.8	0.0	2.0	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_2	PF03446.10	gi|297621394|ref|YP_003709531.1|	-	5.2e-05	23.1	0.1	0.00026	20.8	0.0	2.2	2	1	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ApbA	PF02558.11	gi|297621394|ref|YP_003709531.1|	-	7.1e-05	22.2	0.0	0.00013	21.3	0.0	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
3HCDH_N	PF02737.13	gi|297621394|ref|YP_003709531.1|	-	8e-05	22.3	0.0	0.00016	21.4	0.0	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.22	gi|297621394|ref|YP_003709531.1|	-	0.00013	22.3	0.2	0.0023	18.3	0.0	2.7	3	0	0	3	3	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|297621394|ref|YP_003709531.1|	-	0.0014	17.6	0.3	0.0022	16.9	0.2	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
TrkA_N	PF02254.13	gi|297621394|ref|YP_003709531.1|	-	0.0022	17.9	0.1	0.0062	16.5	0.0	1.8	1	0	0	1	1	1	1	TrkA-N	domain
FAD_binding_3	PF01494.14	gi|297621394|ref|YP_003709531.1|	-	0.011	14.7	0.1	0.019	14.0	0.0	1.3	1	0	0	1	1	1	0	FAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|297621394|ref|YP_003709531.1|	-	0.021	14.3	0.0	0.087	12.3	0.0	2.0	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|297621394|ref|YP_003709531.1|	-	0.031	13.4	0.1	0.52	9.4	0.0	2.3	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ThiF	PF00899.16	gi|297621394|ref|YP_003709531.1|	-	0.037	13.8	0.9	0.62	9.8	0.2	2.5	1	1	1	2	2	2	0	ThiF	family
Pyr_redox_2	PF07992.9	gi|297621394|ref|YP_003709531.1|	-	0.065	13.1	0.0	0.14	11.9	0.0	1.8	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_7	PF13241.1	gi|297621394|ref|YP_003709531.1|	-	0.076	13.2	0.0	0.24	11.6	0.0	1.9	1	1	0	1	1	1	0	Putative	NAD(P)-binding
NAD_binding_8	PF13450.1	gi|297621394|ref|YP_003709531.1|	-	0.12	12.4	0.1	0.33	11.0	0.1	1.8	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
polyprenyl_synt	PF00348.12	gi|297621395|ref|YP_003709532.1|	-	8.6e-74	247.6	0.6	1.1e-73	247.3	0.4	1.0	1	0	0	1	1	1	1	Polyprenyl	synthetase
Bac_transf	PF02397.11	gi|297621396|ref|YP_003709533.1|	-	1.3e-68	229.7	0.0	1.6e-68	229.5	0.0	1.1	1	0	0	1	1	1	1	Bacterial	sugar	transferase
DUF1179	PF06678.6	gi|297621396|ref|YP_003709533.1|	-	0.15	12.4	1.6	0.23	11.7	1.1	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1179)
ABC2_membrane_5	PF13346.1	gi|297621397|ref|YP_003709534.1|	-	0.061	12.6	7.8	0.25	10.6	0.2	2.1	2	0	0	2	2	2	0	ABC-2	family	transporter	protein
PNPase	PF03726.9	gi|297621398|ref|YP_003709535.1|	-	0.0057	16.9	0.8	0.011	16.0	0.6	1.5	1	0	0	1	1	1	1	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
DUF3022	PF11226.3	gi|297621398|ref|YP_003709535.1|	-	0.061	13.2	0.0	0.5	10.2	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3022)
DUF4533	PF15047.1	gi|297621398|ref|YP_003709535.1|	-	0.086	12.2	0.1	0.13	11.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4533)
THF_DHG_CYH_C	PF02882.14	gi|297621399|ref|YP_003709536.1|	-	9.3e-68	226.3	0.2	1.2e-67	225.9	0.2	1.2	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
THF_DHG_CYH	PF00763.18	gi|297621399|ref|YP_003709536.1|	-	7.7e-40	135.5	1.7	1.3e-39	134.8	1.1	1.3	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	catalytic	domain
Malic_M	PF03949.10	gi|297621399|ref|YP_003709536.1|	-	0.032	13.7	0.0	0.053	13.0	0.0	1.2	1	0	0	1	1	1	0	Malic	enzyme,	NAD	binding	domain
Radical_SAM	PF04055.16	gi|297621399|ref|YP_003709536.1|	-	0.13	12.4	0.0	2.6	8.2	0.0	2.2	2	0	0	2	2	2	0	Radical	SAM	superfamily
ApbE	PF02424.10	gi|297621400|ref|YP_003709537.1|	-	8.9e-72	241.4	0.0	1.1e-71	241.0	0.0	1.1	1	0	0	1	1	1	1	ApbE	family
Peripla_BP_2	PF01497.13	gi|297621400|ref|YP_003709537.1|	-	0.018	14.1	0.0	0.034	13.2	0.0	1.4	1	0	0	1	1	1	0	Periplasmic	binding	protein
TPR_11	PF13414.1	gi|297621401|ref|YP_003709538.1|	-	1.2e-08	34.4	2.1	1.2e-08	34.4	1.4	2.9	3	1	1	4	4	4	1	TPR	repeat
TPR_16	PF13432.1	gi|297621401|ref|YP_003709538.1|	-	2.8e-07	31.0	0.7	0.0012	19.4	0.2	2.4	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|297621401|ref|YP_003709538.1|	-	0.00045	20.4	4.2	0.13	12.7	0.1	4.0	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|297621401|ref|YP_003709538.1|	-	0.00052	19.8	0.2	0.00086	19.1	0.1	1.4	1	1	0	1	1	1	1	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297621401|ref|YP_003709538.1|	-	0.002	17.7	0.0	0.002	17.7	0.0	3.8	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|297621401|ref|YP_003709538.1|	-	0.005	16.9	2.4	0.036	14.2	0.3	2.6	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|297621401|ref|YP_003709538.1|	-	0.0057	16.9	1.4	0.029	14.6	0.3	2.4	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|297621401|ref|YP_003709538.1|	-	0.0078	15.7	10.3	0.094	12.3	0.0	3.7	5	0	0	5	5	5	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|297621401|ref|YP_003709538.1|	-	0.011	16.3	0.4	1.2	9.9	0.1	3.2	1	1	2	3	3	3	0	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297621401|ref|YP_003709538.1|	-	0.015	15.1	8.6	4.2	7.5	0.2	3.9	5	0	0	5	5	4	0	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297621401|ref|YP_003709538.1|	-	0.017	15.0	1.4	0.06	13.2	0.4	2.2	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297621401|ref|YP_003709538.1|	-	0.059	13.5	3.2	1.1	9.4	0.3	2.8	1	1	2	3	3	3	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
Mesd	PF10185.4	gi|297621401|ref|YP_003709538.1|	-	0.1	12.3	0.1	0.14	11.8	0.1	1.2	1	0	0	1	1	1	0	Chaperone	for	wingless	signalling	and	trafficking	of	LDL	receptor
DUF883	PF05957.8	gi|297621402|ref|YP_003709539.1|	-	0.0016	18.8	0.1	0.0019	18.5	0.0	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF883)
Phage_rep_org_N	PF09681.5	gi|297621404|ref|YP_003709541.1|	-	0.00066	19.2	0.2	0.39	10.3	0.1	3.2	3	0	0	3	3	3	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
AAA_assoc_C	PF09821.4	gi|297621404|ref|YP_003709541.1|	-	0.0014	18.9	0.0	0.028	14.6	0.0	2.5	2	1	0	2	2	2	1	C-terminal	AAA-associated	domain
HTH_Crp_2	PF13545.1	gi|297621404|ref|YP_003709541.1|	-	0.067	12.9	0.1	0.33	10.7	0.0	2.1	3	0	0	3	3	3	0	Crp-like	helix-turn-helix	domain
HemN_C	PF06969.11	gi|297621404|ref|YP_003709541.1|	-	0.091	12.8	0.1	6.2	6.9	0.0	2.9	3	0	0	3	3	3	0	HemN	C-terminal	domain
HTH_27	PF13463.1	gi|297621404|ref|YP_003709541.1|	-	0.11	12.7	0.0	38	4.7	0.0	3.2	4	0	0	4	4	4	0	Winged	helix	DNA-binding	domain
SMC_N	PF02463.14	gi|297621405|ref|YP_003709542.1|	-	1.9e-19	69.7	0.0	2.6e-19	69.3	0.0	1.1	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|297621405|ref|YP_003709542.1|	-	2.3e-16	60.7	0.3	3.7e-16	60.0	0.2	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_21	PF13304.1	gi|297621405|ref|YP_003709542.1|	-	1.1e-09	38.6	0.2	4.5e-07	30.1	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|297621405|ref|YP_003709542.1|	-	7.8e-07	28.5	0.0	3.1e-06	26.6	0.0	2.0	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|297621405|ref|YP_003709542.1|	-	8.7e-06	25.0	0.0	1.3e-05	24.4	0.0	1.2	1	0	0	1	1	1	1	AAA	ATPase	domain
DUF313	PF03754.8	gi|297621405|ref|YP_003709542.1|	-	0.018	14.9	0.1	0.029	14.2	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF313)
ABC_tran	PF00005.22	gi|297621405|ref|YP_003709542.1|	-	0.037	14.3	0.2	0.1	12.9	0.1	2.0	1	1	0	1	1	1	0	ABC	transporter
DUF4051	PF13260.1	gi|297621405|ref|YP_003709542.1|	-	0.095	12.0	0.1	0.22	10.8	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4051)
DNA_pol3_beta	PF00712.14	gi|297621406|ref|YP_003709543.1|	-	2.6e-32	111.2	0.2	4.5e-24	84.6	0.1	3.1	3	1	0	3	3	3	2	DNA	polymerase	III	beta	subunit,	N-terminal	domain
DNA_pol3_beta_2	PF02767.11	gi|297621406|ref|YP_003709543.1|	-	1e-28	99.6	0.1	1.6e-21	76.4	0.0	2.6	3	0	0	3	3	3	2	DNA	polymerase	III	beta	subunit,	central	domain
DNA_pol3_beta_3	PF02768.10	gi|297621406|ref|YP_003709543.1|	-	4.6e-18	64.9	0.0	1.9e-17	62.9	0.0	2.1	2	0	0	2	2	2	1	DNA	polymerase	III	beta	subunit,	C-terminal	domain
SmpB	PF01668.13	gi|297621407|ref|YP_003709544.1|	-	1.9e-27	94.8	0.0	4.1e-27	93.7	0.0	1.5	1	0	0	1	1	1	1	SmpB	protein
CTV_P23	PF04808.7	gi|297621407|ref|YP_003709544.1|	-	0.045	13.0	0.3	0.062	12.6	0.2	1.2	1	0	0	1	1	1	0	Citrus	tristeza	virus	(CTV)	P23	protein
SPOUT_MTase	PF02590.12	gi|297621408|ref|YP_003709545.1|	-	3.9e-36	124.1	0.2	3.3e-34	117.8	0.1	2.0	1	1	0	1	1	1	1	Predicted	SPOUT	methyltransferase
SPOUT_MTase_2	PF14419.1	gi|297621408|ref|YP_003709545.1|	-	0.15	11.2	0.0	0.22	10.7	0.0	1.2	1	0	0	1	1	1	0	AF2226-like	SPOUT	RNA	Methylase	fused	to	THUMP
Ni_hydr_CYTB	PF01292.15	gi|297621409|ref|YP_003709546.1|	-	2.7	7.3	9.5	84	2.4	5.8	2.1	1	1	0	1	1	1	0	Prokaryotic	cytochrome	b561
TRAM	PF01938.15	gi|297621410|ref|YP_003709547.1|	-	9.1e-05	22.1	0.2	0.00016	21.3	0.1	1.4	1	0	0	1	1	1	1	TRAM	domain
MFS_1	PF07690.11	gi|297621410|ref|YP_003709547.1|	-	0.62	8.7	17.8	0.9	8.1	12.3	1.1	1	0	0	1	1	1	0	Major	Facilitator	Superfamily
ACPS	PF01648.15	gi|297621411|ref|YP_003709548.1|	-	4.7e-24	84.4	0.0	5.3e-24	84.2	0.0	1.0	1	0	0	1	1	1	1	4'-phosphopantetheinyl	transferase	superfamily
Alba	PF01918.16	gi|297621411|ref|YP_003709548.1|	-	0.11	12.0	0.3	0.31	10.6	0.0	2.0	2	0	0	2	2	2	0	Alba
PP-binding	PF00550.20	gi|297621412|ref|YP_003709549.1|	-	2.6e-14	53.2	1.1	2.9e-14	53.0	0.8	1.0	1	0	0	1	1	1	1	Phosphopantetheine	attachment	site
DUF1493	PF07377.7	gi|297621412|ref|YP_003709549.1|	-	3.4e-07	30.3	0.5	3.7e-07	30.2	0.4	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1493)
PP-binding_2	PF14573.1	gi|297621412|ref|YP_003709549.1|	-	0.017	15.1	1.9	0.028	14.4	0.2	1.8	1	1	0	2	2	2	0	Acyl-carrier
Exonuc_VII_S	PF02609.11	gi|297621412|ref|YP_003709549.1|	-	0.023	14.4	1.7	0.24	11.2	0.2	2.3	1	1	1	2	2	2	0	Exonuclease	VII	small	subunit
Ribosomal_L50	PF10501.4	gi|297621412|ref|YP_003709549.1|	-	0.066	13.1	0.0	0.07	13.1	0.0	1.3	1	1	0	1	1	1	0	Ribosomal	subunit	39S
adh_short	PF00106.20	gi|297621413|ref|YP_003709550.1|	-	2e-41	141.7	3.7	2.7e-41	141.2	2.5	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|297621413|ref|YP_003709550.1|	-	2.2e-33	116.0	1.0	2.7e-33	115.7	0.7	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|297621413|ref|YP_003709550.1|	-	5.9e-25	87.9	0.9	7.6e-25	87.6	0.6	1.2	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|297621413|ref|YP_003709550.1|	-	1.9e-06	27.4	1.0	4.8e-06	26.1	0.2	1.9	2	0	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|297621413|ref|YP_003709550.1|	-	0.00014	20.7	1.4	0.0002	20.1	1.0	1.3	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_10	PF13460.1	gi|297621413|ref|YP_003709550.1|	-	0.00045	20.2	0.5	0.00069	19.6	0.4	1.3	1	0	0	1	1	1	1	NADH(P)-binding
Polysacc_synt_2	PF02719.10	gi|297621413|ref|YP_003709550.1|	-	0.00093	18.1	1.2	0.0013	17.7	0.8	1.3	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
Saccharop_dh	PF03435.13	gi|297621413|ref|YP_003709550.1|	-	0.0026	16.8	0.2	0.0043	16.0	0.1	1.4	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
Eno-Rase_NADH_b	PF12242.3	gi|297621413|ref|YP_003709550.1|	-	0.012	15.3	1.5	0.02	14.6	0.3	1.9	2	0	0	2	2	2	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
DNA_processg_A	PF02481.10	gi|297621413|ref|YP_003709550.1|	-	0.031	13.1	0.8	0.07	12.0	0.6	1.6	1	0	0	1	1	1	0	DNA	recombination-mediator	protein	A
HEM4	PF02602.10	gi|297621413|ref|YP_003709550.1|	-	0.095	11.9	0.2	0.41	9.8	0.0	2.0	2	0	0	2	2	2	0	Uroporphyrinogen-III	synthase	HemD
Acyl_transf_1	PF00698.16	gi|297621414|ref|YP_003709551.1|	-	3.1e-32	112.1	0.0	3.5e-32	111.9	0.0	1.0	1	0	0	1	1	1	1	Acyl	transferase	domain
ACP_syn_III_C	PF08541.5	gi|297621415|ref|YP_003709552.1|	-	4.1e-32	110.0	0.0	9.9e-32	108.8	0.0	1.7	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
ACP_syn_III	PF08545.5	gi|297621415|ref|YP_003709552.1|	-	9.5e-28	95.6	1.0	2e-27	94.6	0.7	1.6	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Chal_sti_synt_C	PF02797.10	gi|297621415|ref|YP_003709552.1|	-	2.3e-05	24.3	0.0	7.4e-05	22.7	0.0	1.8	2	0	0	2	2	2	1	Chalcone	and	stilbene	synthases,	C-terminal	domain
SpoVAD	PF07451.6	gi|297621415|ref|YP_003709552.1|	-	0.00061	18.3	4.5	0.14	10.5	1.5	2.4	2	1	0	2	2	2	2	Stage	V	sporulation	protein	AD	(SpoVAD)
Chal_sti_synt_N	PF00195.14	gi|297621415|ref|YP_003709552.1|	-	0.0015	17.8	1.4	0.0024	17.1	0.2	1.8	2	0	0	2	2	2	1	Chalcone	and	stilbene	synthases,	N-terminal	domain
YukD	PF08817.5	gi|297621415|ref|YP_003709552.1|	-	0.019	15.4	0.2	0.27	11.8	0.0	2.3	2	0	0	2	2	2	0	WXG100	protein	secretion	system	(Wss),	protein	YukD
DNA_pol_B_thumb	PF14791.1	gi|297621415|ref|YP_003709552.1|	-	0.13	11.9	0.0	0.28	10.9	0.0	1.6	1	0	0	1	1	1	0	DNA	polymerase	beta	thumb
Toprim_4	PF13662.1	gi|297621416|ref|YP_003709553.1|	-	5.5e-19	67.9	0.0	8.2e-19	67.4	0.0	1.3	1	0	0	1	1	1	1	Toprim	domain
RecR	PF02132.10	gi|297621416|ref|YP_003709553.1|	-	0.00011	21.5	2.4	0.00011	21.5	1.7	2.1	2	0	0	2	2	2	1	RecR	protein
Toprim	PF01751.17	gi|297621416|ref|YP_003709553.1|	-	0.0056	16.6	0.0	0.01	15.7	0.0	1.4	1	0	0	1	1	1	1	Toprim	domain
HHH	PF00633.18	gi|297621416|ref|YP_003709553.1|	-	0.085	12.6	0.0	0.17	11.6	0.0	1.5	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
Surf_Ag_VNR	PF07244.10	gi|297621417|ref|YP_003709554.1|	-	8.1e-52	173.5	8.7	6e-15	55.4	0.0	5.3	5	0	0	5	5	5	5	Surface	antigen	variable	number	repeat
Bac_surface_Ag	PF01103.18	gi|297621417|ref|YP_003709554.1|	-	6.7e-44	150.6	0.8	1e-43	150.0	0.6	1.2	1	0	0	1	1	1	1	Surface	antigen
POTRA_2	PF08479.6	gi|297621417|ref|YP_003709554.1|	-	2.4e-06	27.0	0.0	0.12	12.0	0.0	2.8	3	0	0	3	3	3	2	POTRA	domain,	ShlB-type
OmpH	PF03938.9	gi|297621418|ref|YP_003709555.1|	-	2e-23	83.0	7.6	2.5e-23	82.7	5.2	1.0	1	0	0	1	1	1	1	Outer	membrane	protein	(OmpH-like)
Phage_min_cap2	PF06152.6	gi|297621418|ref|YP_003709555.1|	-	0.00064	18.8	1.5	0.00064	18.8	1.0	1.4	1	1	0	1	1	1	1	Phage	minor	capsid	protein	2
DUF948	PF06103.6	gi|297621418|ref|YP_003709555.1|	-	0.022	14.5	5.0	1.4	8.7	0.5	2.4	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Herpes_BLRF2	PF05812.7	gi|297621418|ref|YP_003709555.1|	-	0.039	13.7	2.6	0.074	12.8	1.3	1.7	1	1	1	2	2	2	0	Herpesvirus	BLRF2	protein
Methyltransf_33	PF10017.4	gi|297621418|ref|YP_003709555.1|	-	0.05	13.4	0.6	0.19	11.6	0.4	1.9	1	1	0	1	1	1	0	Histidine-specific	methyltransferase,	SAM-dependent
Syntaxin-18_N	PF10496.4	gi|297621418|ref|YP_003709555.1|	-	0.083	12.7	3.0	0.2	11.5	2.1	1.6	1	1	0	1	1	1	0	SNARE-complex	protein	Syntaxin-18	N-terminus
zf-C4H2	PF10146.4	gi|297621418|ref|YP_003709555.1|	-	0.094	12.7	2.5	0.13	12.2	1.7	1.2	1	0	0	1	1	1	0	Zinc	finger-containing	protein
Fzo_mitofusin	PF04799.8	gi|297621418|ref|YP_003709555.1|	-	0.11	11.9	2.2	0.2	11.0	1.5	1.4	1	0	0	1	1	1	0	fzo-like	conserved	region
LETM1	PF07766.8	gi|297621418|ref|YP_003709555.1|	-	0.29	10.1	5.9	0.16	11.0	1.9	1.9	1	1	1	2	2	2	0	LETM1-like	protein
HALZ	PF02183.13	gi|297621418|ref|YP_003709555.1|	-	1.1	9.0	6.7	0.43	10.3	0.7	2.3	2	0	0	2	2	2	0	Homeobox	associated	leucine	zipper
TMF_TATA_bd	PF12325.3	gi|297621418|ref|YP_003709555.1|	-	1.2	8.8	10.2	0.68	9.6	5.0	2.1	2	1	0	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
Hexapep	PF00132.19	gi|297621419|ref|YP_003709556.1|	-	4.7e-33	111.2	41.2	7.7e-11	40.9	2.1	5.8	5	1	1	6	6	6	6	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|297621419|ref|YP_003709556.1|	-	4e-18	64.6	24.1	1.1e-09	37.7	1.4	5.4	4	1	2	6	6	6	5	Hexapeptide	repeat	of	succinyl-transferase
LpxD	PF04613.9	gi|297621419|ref|YP_003709556.1|	-	9.3e-14	50.7	0.0	2.7e-13	49.2	0.0	1.8	1	1	0	1	1	1	1	UDP-3-O-[3-hydroxymyristoyl]	glucosamine	N-acyltransferase,	LpxD
Latrotoxin_C	PF15658.1	gi|297621421|ref|YP_003709558.1|	-	0.01	15.6	0.1	0.013	15.3	0.1	1.1	1	0	0	1	1	1	0	Latrotoxin	C-terminal	domain
ParD	PF09386.5	gi|297621421|ref|YP_003709558.1|	-	0.012	15.7	0.0	0.11	12.5	0.0	2.0	1	1	1	2	2	2	0	Antitoxin	ParD
RHH_1	PF01402.16	gi|297621421|ref|YP_003709558.1|	-	0.12	12.2	0.4	0.21	11.5	0.2	1.3	1	0	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
Plasmid_stabil	PF05016.9	gi|297621422|ref|YP_003709559.1|	-	1.1e-07	32.1	0.1	1.2e-07	32.0	0.1	1.0	1	0	0	1	1	1	1	Plasmid	stabilisation	system	protein
DDE_3	PF13358.1	gi|297621424|ref|YP_003709561.1|	-	7.9e-29	100.2	0.0	1.3e-28	99.6	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.1	gi|297621424|ref|YP_003709561.1|	-	7.4e-19	67.0	0.1	1.9e-18	65.7	0.1	1.7	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_29	PF13551.1	gi|297621424|ref|YP_003709561.1|	-	9.3e-10	38.6	0.0	2.4e-09	37.3	0.0	1.7	2	0	0	2	2	1	1	Winged	helix-turn	helix
rve	PF00665.21	gi|297621424|ref|YP_003709561.1|	-	3.7e-09	36.7	0.0	5.6e-08	32.9	0.0	2.3	2	0	0	2	2	2	1	Integrase	core	domain
HTH_23	PF13384.1	gi|297621424|ref|YP_003709561.1|	-	7.2e-07	28.6	0.0	2e-06	27.2	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|297621424|ref|YP_003709561.1|	-	2.2e-05	24.3	0.1	8.5e-05	22.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|297621424|ref|YP_003709561.1|	-	0.0003	20.1	0.0	0.00064	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
DDE_Tnp_ISAZ013	PF07592.6	gi|297621424|ref|YP_003709561.1|	-	0.0023	16.7	0.2	0.11	11.2	0.1	2.2	2	0	0	2	2	2	1	Rhodopirellula	transposase	DDE	domain
Terminase_5	PF06056.7	gi|297621424|ref|YP_003709561.1|	-	0.0027	17.2	0.0	0.0054	16.2	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
rve_3	PF13683.1	gi|297621424|ref|YP_003709561.1|	-	0.0041	16.6	0.0	0.014	14.9	0.0	1.9	2	0	0	2	2	1	1	Integrase	core	domain
Sigma70_r4	PF04545.11	gi|297621424|ref|YP_003709561.1|	-	0.012	14.9	0.0	0.034	13.4	0.0	1.8	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_40	PF14493.1	gi|297621424|ref|YP_003709561.1|	-	0.015	15.5	0.0	0.039	14.1	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_32	PF13565.1	gi|297621424|ref|YP_003709561.1|	-	0.032	15.0	1.9	5	7.9	0.0	3.5	2	1	2	4	4	3	0	Homeodomain-like	domain
HTH_38	PF13936.1	gi|297621424|ref|YP_003709561.1|	-	0.048	13.2	0.2	0.88	9.1	0.1	2.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|297621424|ref|YP_003709561.1|	-	0.065	12.8	0.0	0.16	11.6	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
GerE	PF00196.14	gi|297621424|ref|YP_003709561.1|	-	0.081	12.2	0.1	0.3	10.4	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.1	gi|297621424|ref|YP_003709561.1|	-	1.8	8.9	6.1	6	7.2	0.2	3.3	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
Abhydrolase_6	PF12697.2	gi|297621425|ref|YP_003709562.1|	-	6.6e-15	55.6	0.0	9.8e-15	55.0	0.0	1.3	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|297621425|ref|YP_003709562.1|	-	1e-07	31.7	0.0	1.9e-07	30.8	0.0	1.4	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|297621425|ref|YP_003709562.1|	-	0.00082	19.1	0.0	0.0013	18.4	0.0	1.5	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Esterase	PF00756.15	gi|297621425|ref|YP_003709562.1|	-	0.019	14.4	0.1	0.035	13.5	0.0	1.5	2	0	0	2	2	2	0	Putative	esterase
GRDB	PF07355.7	gi|297621426|ref|YP_003709563.1|	-	0.0031	16.5	0.5	0.0031	16.5	0.3	1.7	2	0	0	2	2	2	1	Glycine/sarcosine/betaine	reductase	selenoprotein	B	(GRDB)
KH_5	PF13184.1	gi|297621426|ref|YP_003709563.1|	-	0.069	12.9	0.2	0.2	11.4	0.1	1.7	1	0	0	1	1	1	0	NusA-like	KH	domain
2-oxoacid_dh	PF00198.18	gi|297621427|ref|YP_003709564.1|	-	6.3e-78	261.2	0.0	9.3e-78	260.6	0.0	1.3	1	0	0	1	1	1	1	2-oxoacid	dehydrogenases	acyltransferase	(catalytic	domain)
Biotin_lipoyl	PF00364.17	gi|297621427|ref|YP_003709564.1|	-	5.9e-16	57.8	0.4	1.2e-15	56.8	0.0	1.7	2	0	0	2	2	2	1	Biotin-requiring	enzyme
E3_binding	PF02817.12	gi|297621427|ref|YP_003709564.1|	-	2e-15	56.0	2.8	2.3e-15	55.9	0.4	2.1	2	0	0	2	2	2	1	e3	binding	domain
Biotin_lipoyl_2	PF13533.1	gi|297621427|ref|YP_003709564.1|	-	0.00092	18.8	0.5	0.0031	17.1	0.0	2.1	2	0	0	2	2	2	1	Biotin-lipoyl	like
AATase	PF07247.7	gi|297621427|ref|YP_003709564.1|	-	0.022	13.3	0.0	0.081	11.4	0.0	1.9	3	0	0	3	3	3	0	Alcohol	acetyltransferase
Transket_pyr	PF02779.19	gi|297621428|ref|YP_003709565.1|	-	1.6e-43	148.2	0.0	2.8e-43	147.4	0.0	1.4	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|297621428|ref|YP_003709565.1|	-	6.4e-40	135.9	0.1	1.1e-39	135.2	0.1	1.4	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
FMN_red	PF03358.10	gi|297621428|ref|YP_003709565.1|	-	0.0045	16.5	0.0	0.058	12.8	0.0	2.4	3	0	0	3	3	3	1	NADPH-dependent	FMN	reductase
E1_dh	PF00676.15	gi|297621429|ref|YP_003709566.1|	-	7.9e-77	257.9	0.0	9e-77	257.7	0.0	1.0	1	0	0	1	1	1	1	Dehydrogenase	E1	component
Transketolase_N	PF00456.16	gi|297621429|ref|YP_003709566.1|	-	3e-07	29.5	0.0	4e-07	29.1	0.0	1.1	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
TPP_enzyme_C	PF02775.16	gi|297621429|ref|YP_003709566.1|	-	1.1e-06	28.2	0.1	2.6e-06	27.1	0.1	1.7	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|297621429|ref|YP_003709566.1|	-	1.5e-05	24.0	0.1	4.9e-05	22.4	0.0	1.9	3	0	0	3	3	3	1	1-deoxy-D-xylulose-5-phosphate	synthase
Luciferase_N	PF05295.6	gi|297621429|ref|YP_003709566.1|	-	0.075	12.8	0.0	1.6	8.6	0.0	2.3	1	1	1	2	2	2	0	Luciferase/LBP	N-terminal	domain
PG_binding_2	PF08823.6	gi|297621429|ref|YP_003709566.1|	-	0.08	13.0	0.2	1.8	8.7	0.0	2.4	2	0	0	2	2	2	0	Putative	peptidoglycan	binding	domain
DUF2847	PF11009.3	gi|297621430|ref|YP_003709567.1|	-	9.9e-21	73.3	0.0	1.4e-20	72.7	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2847)
SDF	PF00375.13	gi|297621431|ref|YP_003709568.1|	-	8.5e-97	324.3	39.1	9.8e-97	324.1	27.1	1.0	1	0	0	1	1	1	1	Sodium:dicarboxylate	symporter	family
Ank_2	PF12796.2	gi|297621432|ref|YP_003709569.1|	-	6.5e-17	61.6	0.1	8.2e-08	32.4	0.0	4.5	2	1	2	4	4	4	3	Ankyrin	repeats	(3	copies)
Ank_4	PF13637.1	gi|297621432|ref|YP_003709569.1|	-	5.9e-14	52.1	0.1	6.2e-07	29.7	0.0	4.4	3	1	0	4	4	4	2	Ankyrin	repeats	(many	copies)
Ank_5	PF13857.1	gi|297621432|ref|YP_003709569.1|	-	3.4e-11	42.9	0.1	1.5e-07	31.4	0.0	3.0	1	1	1	2	2	2	2	Ankyrin	repeats	(many	copies)
Ank	PF00023.25	gi|297621432|ref|YP_003709569.1|	-	4.9e-11	41.8	0.1	1.9e-06	27.3	0.0	4.1	3	1	0	3	3	3	2	Ankyrin	repeat
Ank_3	PF13606.1	gi|297621432|ref|YP_003709569.1|	-	0.00021	21.2	0.6	0.0097	16.0	0.0	4.3	6	0	0	6	6	6	1	Ankyrin	repeat
UPF0231	PF06062.6	gi|297621432|ref|YP_003709569.1|	-	0.00099	18.9	1.1	0.43	10.4	0.0	4.1	4	1	0	4	4	4	1	Uncharacterised	protein	family	(UPF0231)
PemK	PF02452.12	gi|297621433|ref|YP_003709570.1|	-	1.2e-24	86.5	0.1	1.3e-24	86.4	0.0	1.0	1	0	0	1	1	1	1	PemK-like	protein
DUF479	PF04336.7	gi|297621434|ref|YP_003709571.1|	-	0.016	15.3	0.2	0.021	14.9	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF479
CBP4	PF07960.6	gi|297621434|ref|YP_003709571.1|	-	0.046	13.3	0.1	0.058	13.0	0.1	1.2	1	0	0	1	1	1	0	CBP4
PSK_trans_fac	PF07704.6	gi|297621434|ref|YP_003709571.1|	-	0.049	14.3	0.1	0.068	13.8	0.1	1.3	1	1	0	1	1	1	0	Rv0623-like	transcription	factor
Josephin	PF02099.12	gi|297621434|ref|YP_003709571.1|	-	0.12	11.9	0.1	0.57	9.8	0.0	1.7	1	1	1	2	2	2	0	Josephin
DnaJ	PF00226.26	gi|297621434|ref|YP_003709571.1|	-	0.13	11.9	0.1	0.2	11.4	0.0	1.4	1	0	0	1	1	1	0	DnaJ	domain
Ala_racemase_N	PF01168.15	gi|297621435|ref|YP_003709572.1|	-	1.5e-39	135.8	0.0	1.7e-39	135.6	0.0	1.0	1	0	0	1	1	1	1	Alanine	racemase,	N-terminal	domain
Orn_Arg_deC_N	PF02784.11	gi|297621435|ref|YP_003709572.1|	-	0.02	14.1	0.0	0.025	13.7	0.0	1.2	1	0	0	1	1	1	0	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
OSTbeta	PF15048.1	gi|297621436|ref|YP_003709573.1|	-	0.0081	16.2	0.3	0.018	15.1	0.2	1.7	1	1	0	1	1	1	1	Organic	solute	transporter	subunit	beta	protein
DUF1049	PF06305.6	gi|297621436|ref|YP_003709573.1|	-	0.098	12.1	0.0	0.19	11.2	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1049)
YdfA_immunity	PF12127.3	gi|297621437|ref|YP_003709574.1|	-	3.5e-147	489.4	7.7	4.4e-147	489.1	5.3	1.0	1	0	0	1	1	1	1	SigmaW	regulon	antibacterial
NfeD	PF01957.13	gi|297621438|ref|YP_003709575.1|	-	1.2e-20	74.0	2.5	1.5e-20	73.8	1.7	1.1	1	0	0	1	1	1	1	NfeD-like	C-terminal,	partner-binding
Pox_P21	PF05313.7	gi|297621438|ref|YP_003709575.1|	-	0.068	12.4	0.1	0.073	12.3	0.1	1.2	1	0	0	1	1	1	0	Poxvirus	P21	membrane	protein
DUF3165	PF11364.3	gi|297621438|ref|YP_003709575.1|	-	0.56	10.3	8.1	2.7	8.1	5.6	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3165)
DUF3487	PF11990.3	gi|297621438|ref|YP_003709575.1|	-	5.6	6.3	5.8	1	8.7	0.8	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3487)
CLP_protease	PF00574.18	gi|297621439|ref|YP_003709576.1|	-	5.3e-07	29.4	0.3	0.0034	17.0	0.0	3.0	3	0	0	3	3	3	2	Clp	protease
SDH_sah	PF01972.11	gi|297621439|ref|YP_003709576.1|	-	6.9e-05	21.7	0.0	0.00014	20.7	0.0	1.4	1	0	0	1	1	1	1	Serine	dehydrogenase	proteinase
ECH	PF00378.15	gi|297621439|ref|YP_003709576.1|	-	0.00071	18.7	0.8	0.0019	17.4	0.1	1.9	2	0	0	2	2	2	1	Enoyl-CoA	hydratase/isomerase	family
Peptidase_S49	PF01343.13	gi|297621439|ref|YP_003709576.1|	-	0.019	14.7	0.3	0.038	13.7	0.2	1.5	1	0	0	1	1	1	0	Peptidase	family	S49
DUF1312	PF07009.6	gi|297621439|ref|YP_003709576.1|	-	0.03	14.1	0.1	0.1	12.4	0.1	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1312)
NfeD	PF01957.13	gi|297621439|ref|YP_003709576.1|	-	0.039	14.0	29.4	0.046	13.8	7.3	4.3	4	0	0	4	4	4	0	NfeD-like	C-terminal,	partner-binding
Aminotran_3	PF00202.16	gi|297621440|ref|YP_003709577.1|	-	5.8e-66	222.6	0.0	7.5e-66	222.2	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Bac_surface_Ag	PF01103.18	gi|297621441|ref|YP_003709578.1|	-	1.7e-49	169.0	2.5	2.2e-49	168.6	1.7	1.2	1	0	0	1	1	1	1	Surface	antigen
Surf_Ag_VNR	PF07244.10	gi|297621441|ref|YP_003709578.1|	-	1.4e-07	31.7	0.0	0.00052	20.3	0.0	3.5	3	0	0	3	3	3	2	Surface	antigen	variable	number	repeat
DUF490	PF04357.8	gi|297621442|ref|YP_003709579.1|	-	4.7e-63	213.5	2.4	1.1e-62	212.3	0.7	2.0	2	0	0	2	2	2	1	Family	of	unknown	function	(DUF490)
Prefoldin_2	PF01920.15	gi|297621443|ref|YP_003709580.1|	-	0.08	12.7	1.9	0.2	11.4	1.3	1.7	1	0	0	1	1	1	0	Prefoldin	subunit
ECM11	PF15463.1	gi|297621443|ref|YP_003709580.1|	-	0.1	12.8	1.2	0.3	11.3	0.2	2.2	2	0	0	2	2	2	0	Extracellular	mutant	protein	11
GATase_7	PF13537.1	gi|297621444|ref|YP_003709581.1|	-	2.5e-39	133.8	0.0	5.1e-39	132.8	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.1	gi|297621444|ref|YP_003709581.1|	-	2.9e-35	121.1	0.0	7.6e-35	119.7	0.0	1.7	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
Asn_synthase	PF00733.16	gi|297621444|ref|YP_003709581.1|	-	3.2e-29	102.1	0.1	9.2e-29	100.6	0.1	1.7	1	0	0	1	1	1	1	Asparagine	synthase
GATase_2	PF00310.16	gi|297621444|ref|YP_003709581.1|	-	0.0021	16.8	0.0	0.63	8.6	0.0	2.2	1	1	1	2	2	2	2	Glutamine	amidotransferases	class-II
ATP-grasp_4	PF13535.1	gi|297621445|ref|YP_003709582.1|	-	0.0013	18.4	0.0	0.0026	17.4	0.0	1.6	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_ST	PF14397.1	gi|297621445|ref|YP_003709582.1|	-	0.0067	15.5	0.0	0.0094	15.0	0.0	1.2	1	0	0	1	1	1	1	Sugar-transfer	associated	ATP-grasp
ATPgrasp_TupA	PF14305.1	gi|297621445|ref|YP_003709582.1|	-	0.0098	15.2	0.0	0.018	14.3	0.0	1.3	1	0	0	1	1	1	1	TupA-like	ATPgrasp
GARS_A	PF01071.14	gi|297621445|ref|YP_003709582.1|	-	0.037	13.5	0.0	0.079	12.5	0.0	1.5	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
Permease	PF02405.11	gi|297621446|ref|YP_003709583.1|	-	4e-72	242.1	19.5	4.8e-72	241.9	13.5	1.1	1	0	0	1	1	1	1	Permease
FtsX	PF02687.16	gi|297621446|ref|YP_003709583.1|	-	0.54	10.0	13.8	0.022	14.5	2.6	2.8	3	0	0	3	3	3	0	FtsX-like	permease	family
ABC_tran	PF00005.22	gi|297621447|ref|YP_003709584.1|	-	8.8e-30	103.7	0.0	1.2e-29	103.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297621447|ref|YP_003709584.1|	-	1.7e-06	28.2	0.0	4.2e-05	23.6	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|297621447|ref|YP_003709584.1|	-	9.8e-05	21.6	0.0	0.0002	20.6	0.0	1.5	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
DUF258	PF03193.11	gi|297621447|ref|YP_003709584.1|	-	0.00029	20.0	0.0	0.00049	19.3	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Miro	PF08477.8	gi|297621447|ref|YP_003709584.1|	-	0.00084	19.8	0.1	0.0017	18.8	0.1	1.8	1	1	0	1	1	1	1	Miro-like	protein
Arch_ATPase	PF01637.13	gi|297621447|ref|YP_003709584.1|	-	0.0035	17.0	0.1	0.0052	16.5	0.1	1.4	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_16	PF13191.1	gi|297621447|ref|YP_003709584.1|	-	0.0045	17.0	0.0	0.0092	15.9	0.0	1.5	2	0	0	2	2	2	1	AAA	ATPase	domain
MMR_HSR1	PF01926.18	gi|297621447|ref|YP_003709584.1|	-	0.0047	16.8	0.1	0.0082	16.0	0.1	1.8	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
NACHT	PF05729.7	gi|297621447|ref|YP_003709584.1|	-	0.016	14.8	0.1	0.033	13.8	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_25	PF13481.1	gi|297621447|ref|YP_003709584.1|	-	0.022	14.1	0.0	0.06	12.7	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|297621447|ref|YP_003709584.1|	-	0.022	14.2	0.0	0.022	14.2	0.0	1.3	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
IstB_IS21	PF01695.12	gi|297621447|ref|YP_003709584.1|	-	0.023	14.1	0.2	0.059	12.7	0.0	1.7	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
NB-ARC	PF00931.17	gi|297621447|ref|YP_003709584.1|	-	0.027	13.3	0.0	0.037	12.8	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
AAA_10	PF12846.2	gi|297621447|ref|YP_003709584.1|	-	0.048	13.0	0.1	0.11	11.8	0.0	1.6	2	0	0	2	2	2	0	AAA-like	domain
AAA_22	PF13401.1	gi|297621447|ref|YP_003709584.1|	-	0.051	13.7	0.2	0.11	12.6	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|297621447|ref|YP_003709584.1|	-	0.056	12.9	0.1	0.11	12.0	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_14	PF13173.1	gi|297621447|ref|YP_003709584.1|	-	0.12	12.2	0.1	0.25	11.2	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
MCE	PF02470.15	gi|297621448|ref|YP_003709585.1|	-	2.1e-11	43.6	0.3	4.2e-11	42.7	0.2	1.5	1	0	0	1	1	1	1	mce	related	protein
MCPsignal	PF00015.16	gi|297621448|ref|YP_003709585.1|	-	0.0017	17.9	1.4	0.01	15.4	0.5	2.0	2	0	0	2	2	2	1	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Vhr1	PF04001.8	gi|297621448|ref|YP_003709585.1|	-	0.034	14.0	0.8	0.086	12.7	0.0	2.0	2	1	0	2	2	2	0	Transcription	factor	Vhr1
Baculo_PEP_C	PF04513.7	gi|297621448|ref|YP_003709585.1|	-	0.11	12.2	1.2	0.53	10.1	0.3	2.2	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Syntaxin-6_N	PF09177.6	gi|297621448|ref|YP_003709585.1|	-	0.3	11.5	2.2	3.7	8.0	0.2	2.7	2	1	0	2	2	2	0	Syntaxin	6,	N-terminal
Laminin_II	PF06009.7	gi|297621448|ref|YP_003709585.1|	-	0.53	10.0	4.1	0.19	11.4	0.3	2.1	3	0	0	3	3	3	0	Laminin	Domain	II
DUF179	PF02622.10	gi|297621449|ref|YP_003709586.1|	-	3.4e-42	143.8	0.0	3.9e-42	143.6	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1678
Ribosomal_S9	PF00380.14	gi|297621450|ref|YP_003709587.1|	-	5.3e-44	149.3	1.0	6e-44	149.1	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
Ribosomal_L13	PF00572.13	gi|297621451|ref|YP_003709588.1|	-	2.5e-49	166.5	0.3	3.2e-49	166.2	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L13
Acyl-CoA_dh_M	PF02770.14	gi|297621451|ref|YP_003709588.1|	-	0.076	12.5	0.0	0.14	11.6	0.0	1.4	1	0	0	1	1	1	0	Acyl-CoA	dehydrogenase,	middle	domain
Radical_SAM	PF04055.16	gi|297621452|ref|YP_003709589.1|	-	5.4e-33	114.5	1.0	3.1e-32	112.0	0.2	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.15	gi|297621452|ref|YP_003709589.1|	-	4.2e-29	100.2	0.0	1.2e-28	98.7	0.0	1.8	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.15	gi|297621452|ref|YP_003709589.1|	-	1.9e-05	24.3	0.1	7e-05	22.5	0.1	2.0	1	1	0	1	1	1	1	TRAM	domain
EcoRII-C	PF09019.6	gi|297621452|ref|YP_003709589.1|	-	0.0061	16.4	0.8	0.016	15.0	0.6	1.7	1	1	0	1	1	1	1	EcoRII	C	terminal
DUF4187	PF13821.1	gi|297621452|ref|YP_003709589.1|	-	0.076	12.6	1.1	0.33	10.5	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4187)
Sod_Cu	PF00080.15	gi|297621453|ref|YP_003709590.1|	-	1.1e-44	152.0	6.1	1.5e-44	151.5	4.2	1.3	1	0	0	1	1	1	1	Copper/zinc	superoxide	dismutase	(SODC)
Ham1p_like	PF01725.11	gi|297621453|ref|YP_003709590.1|	-	0.022	14.1	0.1	0.035	13.4	0.1	1.3	1	0	0	1	1	1	0	Ham1	family
DUF4425	PF14466.1	gi|297621453|ref|YP_003709590.1|	-	0.044	13.8	1.8	0.68	10.0	0.0	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4425)
DNA_ligase_aden	PF01653.13	gi|297621454|ref|YP_003709591.1|	-	1.3e-107	359.3	0.0	1.8e-107	358.9	0.0	1.2	1	0	0	1	1	1	1	NAD-dependent	DNA	ligase	adenylation	domain
DNA_ligase_OB	PF03120.11	gi|297621454|ref|YP_003709591.1|	-	8.2e-32	108.7	1.2	1.5e-31	107.8	0.8	1.5	1	0	0	1	1	1	1	NAD-dependent	DNA	ligase	OB-fold	domain
HHH_2	PF12826.2	gi|297621454|ref|YP_003709591.1|	-	2.2e-20	72.3	0.7	6.3e-19	67.6	0.1	2.6	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
BRCT	PF00533.21	gi|297621454|ref|YP_003709591.1|	-	4.2e-17	62.0	0.0	1.4e-16	60.3	0.0	2.0	1	0	0	1	1	1	1	BRCA1	C	Terminus	(BRCT)	domain
HHH_5	PF14520.1	gi|297621454|ref|YP_003709591.1|	-	2.4e-16	59.6	0.3	6.2e-07	29.4	0.0	2.7	2	0	0	2	2	2	2	Helix-hairpin-helix	domain
DNA_ligase_ZBD	PF03119.11	gi|297621454|ref|YP_003709591.1|	-	4.2e-10	39.1	9.4	1.6e-09	37.2	6.5	2.1	1	0	0	1	1	1	1	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
HHH	PF00633.18	gi|297621454|ref|YP_003709591.1|	-	5e-06	25.9	0.2	3.3e-05	23.3	0.1	2.4	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
PTCB-BRCT	PF12738.2	gi|297621454|ref|YP_003709591.1|	-	8.6e-06	25.5	0.0	2.4e-05	24.1	0.0	1.7	1	0	0	1	1	1	1	twin	BRCT	domain
HHH_3	PF12836.2	gi|297621454|ref|YP_003709591.1|	-	0.00022	21.1	1.6	0.038	13.9	0.1	3.1	2	1	0	2	2	2	1	Helix-hairpin-helix	motif
zf-NADH-PPase	PF09297.6	gi|297621454|ref|YP_003709591.1|	-	0.00031	20.1	0.7	0.00066	19.1	0.5	1.5	1	0	0	1	1	1	1	NADH	pyrophosphatase	zinc	ribbon	domain
RNA_pol_A_CTD	PF03118.10	gi|297621454|ref|YP_003709591.1|	-	0.012	14.9	1.5	2.5	7.5	0.0	3.2	3	0	0	3	3	3	0	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
DNA_ligase_A_M	PF01068.16	gi|297621454|ref|YP_003709591.1|	-	0.03	13.6	0.0	0.1	11.9	0.0	1.9	2	0	0	2	2	2	0	ATP	dependent	DNA	ligase	domain
Auto_anti-p27	PF06677.7	gi|297621454|ref|YP_003709591.1|	-	0.067	12.9	0.3	0.21	11.4	0.2	1.8	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Calmodulin_bind	PF07887.6	gi|297621455|ref|YP_003709592.1|	-	0.0073	15.3	0.0	0.01	14.9	0.0	1.1	1	0	0	1	1	1	1	Calmodulin	binding	protein-like
Radical_SAM	PF04055.16	gi|297621456|ref|YP_003709593.1|	-	1.9e-29	102.9	0.6	2.2e-28	99.5	0.1	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.15	gi|297621456|ref|YP_003709593.1|	-	4.7e-26	90.4	0.3	1e-25	89.4	0.2	1.6	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
Lipase_3	PF01764.20	gi|297621456|ref|YP_003709593.1|	-	0.024	14.2	0.0	2.6	7.6	0.0	2.6	2	1	0	2	2	2	0	Lipase	(class	3)
B12-binding	PF02310.14	gi|297621456|ref|YP_003709593.1|	-	0.12	12.2	0.0	0.28	11.0	0.0	1.6	1	0	0	1	1	1	0	B12	binding	domain
Amino_oxidase	PF01593.19	gi|297621457|ref|YP_003709594.1|	-	1.4e-26	93.5	0.0	6.1e-26	91.4	0.0	1.8	1	1	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
NAD_binding_8	PF13450.1	gi|297621457|ref|YP_003709594.1|	-	3.5e-18	65.4	0.0	8.2e-18	64.2	0.0	1.7	1	1	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|297621457|ref|YP_003709594.1|	-	9.6e-08	31.3	0.0	1.5e-07	30.6	0.0	1.5	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|297621457|ref|YP_003709594.1|	-	2.5e-05	24.4	0.0	7.8e-05	22.8	0.0	1.8	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|297621457|ref|YP_003709594.1|	-	0.00018	20.1	0.0	0.003	16.0	0.0	2.2	2	0	0	2	2	2	1	HI0933-like	protein
Pyr_redox	PF00070.22	gi|297621457|ref|YP_003709594.1|	-	0.00026	21.3	0.0	0.0018	18.6	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|297621457|ref|YP_003709594.1|	-	0.0017	17.5	0.0	0.003	16.6	0.0	1.3	1	0	0	1	1	1	1	Thi4	family
ApbA	PF02558.11	gi|297621457|ref|YP_003709594.1|	-	0.0019	17.6	0.0	0.073	12.5	0.0	2.2	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
Pyr_redox_2	PF07992.9	gi|297621457|ref|YP_003709594.1|	-	0.0023	17.8	0.0	0.0079	16.0	0.0	1.9	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|297621457|ref|YP_003709594.1|	-	0.0042	15.9	0.0	0.0063	15.4	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
FMO-like	PF00743.14	gi|297621457|ref|YP_003709594.1|	-	0.021	13.0	0.0	0.031	12.4	0.0	1.2	1	0	0	1	1	1	0	Flavin-binding	monooxygenase-like
FAD_binding_3	PF01494.14	gi|297621457|ref|YP_003709594.1|	-	0.044	12.8	0.0	0.068	12.2	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
NAD_binding_9	PF13454.1	gi|297621457|ref|YP_003709594.1|	-	0.074	12.8	0.1	0.24	11.1	0.0	1.9	2	0	0	2	2	2	0	FAD-NAD(P)-binding
Lycopene_cycl	PF05834.7	gi|297621457|ref|YP_003709594.1|	-	0.11	11.4	0.1	0.66	8.8	0.0	2.0	2	0	0	2	2	2	0	Lycopene	cyclase	protein
GIDA	PF01134.17	gi|297621457|ref|YP_003709594.1|	-	0.11	11.2	0.0	0.17	10.6	0.0	1.3	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
Rhomboid	PF01694.17	gi|297621458|ref|YP_003709595.1|	-	0.25	11.3	8.8	0.33	10.9	6.1	1.1	1	0	0	1	1	1	0	Rhomboid	family
Bacteriocin_IIc	PF10439.4	gi|297621458|ref|YP_003709595.1|	-	7	6.8	15.0	3.4	7.8	4.5	2.2	2	0	0	2	2	2	0	Bacteriocin	class	II	with	double-glycine	leader	peptide
RadC	PF04002.10	gi|297621459|ref|YP_003709596.1|	-	7.6e-41	138.6	0.0	1e-40	138.2	0.0	1.2	1	0	0	1	1	1	1	RadC-like	JAB	domain
Prok-JAB	PF14464.1	gi|297621459|ref|YP_003709596.1|	-	2.4e-05	23.8	0.0	3.5e-05	23.3	0.0	1.4	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
HHH_2	PF12826.2	gi|297621459|ref|YP_003709596.1|	-	3e-05	23.8	0.1	7e-05	22.6	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
Toxin-JAB1	PF15659.1	gi|297621459|ref|YP_003709596.1|	-	0.14	12.0	0.1	0.2	11.5	0.0	1.2	1	0	0	1	1	1	0	JAB-like	toxin	1
MMR_HSR1	PF01926.18	gi|297621460|ref|YP_003709597.1|	-	8.9e-24	83.6	0.2	2.9e-23	82.0	0.1	1.9	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
GTP-bdg_N	PF13167.1	gi|297621460|ref|YP_003709597.1|	-	4.2e-12	46.0	0.0	9.3e-12	44.9	0.0	1.6	1	0	0	1	1	1	1	GTP-binding	GTPase	N-terminal
GTP_EFTU	PF00009.22	gi|297621460|ref|YP_003709597.1|	-	3.1e-09	36.5	0.4	5.3e-07	29.2	0.3	2.6	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
FeoB_N	PF02421.13	gi|297621460|ref|YP_003709597.1|	-	4.1e-07	29.4	0.3	1.1e-06	27.9	0.2	1.8	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.18	gi|297621460|ref|YP_003709597.1|	-	3e-05	23.8	0.3	0.0079	16.0	0.0	2.7	1	1	1	2	2	2	1	Dynamin	family
Arf	PF00025.16	gi|297621460|ref|YP_003709597.1|	-	5e-05	22.6	0.7	0.00028	20.1	0.5	2.1	1	1	0	1	1	1	1	ADP-ribosylation	factor	family
ATP_bind_1	PF03029.12	gi|297621460|ref|YP_003709597.1|	-	0.00029	20.4	1.6	0.0094	15.5	0.3	2.8	2	1	1	3	3	3	1	Conserved	hypothetical	ATP	binding	protein
cobW	PF02492.14	gi|297621460|ref|YP_003709597.1|	-	0.00032	20.1	2.3	0.051	13.0	0.2	2.6	1	1	1	2	2	2	2	CobW/HypB/UreG,	nucleotide-binding	domain
Miro	PF08477.8	gi|297621460|ref|YP_003709597.1|	-	0.00047	20.6	0.1	0.0026	18.2	0.0	2.4	3	1	0	3	3	1	1	Miro-like	protein
ABC_tran	PF00005.22	gi|297621460|ref|YP_003709597.1|	-	0.0011	19.2	0.0	0.0032	17.7	0.0	1.9	1	1	0	1	1	1	1	ABC	transporter
DUF258	PF03193.11	gi|297621460|ref|YP_003709597.1|	-	0.0014	17.8	0.0	0.0033	16.6	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_23	PF13476.1	gi|297621460|ref|YP_003709597.1|	-	0.0014	18.9	2.2	0.0031	17.8	0.6	2.2	1	1	1	2	2	2	1	AAA	domain
Ras	PF00071.17	gi|297621460|ref|YP_003709597.1|	-	0.0016	17.8	0.0	0.003	16.9	0.0	1.5	1	1	0	1	1	1	1	Ras	family
AAA_16	PF13191.1	gi|297621460|ref|YP_003709597.1|	-	0.0045	16.9	0.4	0.03	14.3	0.2	2.5	1	1	0	1	1	1	1	AAA	ATPase	domain
SRPRB	PF09439.5	gi|297621460|ref|YP_003709597.1|	-	0.0068	15.6	0.3	0.015	14.4	0.2	1.6	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
AAA_29	PF13555.1	gi|297621460|ref|YP_003709597.1|	-	0.015	14.7	0.0	0.032	13.7	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
G-alpha	PF00503.15	gi|297621460|ref|YP_003709597.1|	-	0.017	13.8	1.2	0.28	9.8	0.1	2.1	2	0	0	2	2	2	0	G-protein	alpha	subunit
TroA	PF01297.12	gi|297621460|ref|YP_003709597.1|	-	0.019	14.2	0.0	0.037	13.2	0.0	1.4	1	0	0	1	1	1	0	Periplasmic	solute	binding	protein	family
AAA_17	PF13207.1	gi|297621460|ref|YP_003709597.1|	-	0.022	15.5	0.8	1	10.1	0.0	3.1	2	2	0	2	2	2	0	AAA	domain
ABC_ATPase	PF09818.4	gi|297621460|ref|YP_003709597.1|	-	0.023	13.2	0.4	0.2	10.2	0.0	2.1	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
MobB	PF03205.9	gi|297621460|ref|YP_003709597.1|	-	0.025	14.2	0.0	0.065	12.9	0.0	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
FtsK_SpoIIIE	PF01580.13	gi|297621460|ref|YP_003709597.1|	-	0.052	13.0	0.0	0.2	11.1	0.0	1.9	1	1	1	2	2	2	0	FtsK/SpoIIIE	family
Diphthamide_syn	PF01866.12	gi|297621460|ref|YP_003709597.1|	-	0.082	12.1	0.4	0.2	10.8	0.2	1.7	1	1	0	1	1	1	0	Putative	diphthamide	synthesis	protein
Lactamase_B_2	PF12706.2	gi|297621461|ref|YP_003709598.1|	-	5.3e-16	58.7	0.3	7.6e-16	58.2	0.2	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|297621461|ref|YP_003709598.1|	-	1.1e-10	41.4	3.2	5.4e-10	39.2	2.2	1.9	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|297621461|ref|YP_003709598.1|	-	0.0033	17.1	0.1	0.0061	16.2	0.1	1.6	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
DAO	PF01266.19	gi|297621463|ref|YP_003709600.1|	-	1.4e-39	136.0	0.0	2e-39	135.5	0.0	1.2	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|297621463|ref|YP_003709600.1|	-	1.8e-07	31.0	0.1	4.2e-07	29.8	0.0	1.7	1	1	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.9	gi|297621463|ref|YP_003709600.1|	-	4.3e-05	23.4	0.0	0.00014	21.8	0.0	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|297621463|ref|YP_003709600.1|	-	0.0016	18.5	0.0	0.0023	18.0	0.0	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|297621463|ref|YP_003709600.1|	-	0.0019	17.1	0.0	0.0027	16.6	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox	PF00070.22	gi|297621463|ref|YP_003709600.1|	-	0.0019	18.5	0.0	0.0037	17.6	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|297621463|ref|YP_003709600.1|	-	0.0028	16.8	0.0	0.014	14.4	0.0	1.9	2	0	0	2	2	2	1	Thi4	family
GIDA	PF01134.17	gi|297621463|ref|YP_003709600.1|	-	0.0081	15.0	0.1	0.014	14.2	0.0	1.4	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
NAD_binding_9	PF13454.1	gi|297621463|ref|YP_003709600.1|	-	0.0083	15.9	0.0	0.017	14.9	0.0	1.5	1	0	0	1	1	1	1	FAD-NAD(P)-binding
3HCDH_N	PF02737.13	gi|297621463|ref|YP_003709600.1|	-	0.0083	15.7	0.0	0.012	15.2	0.0	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
HI0933_like	PF03486.9	gi|297621463|ref|YP_003709600.1|	-	0.018	13.4	0.0	0.03	12.8	0.0	1.3	1	0	0	1	1	1	0	HI0933-like	protein
ApbA	PF02558.11	gi|297621463|ref|YP_003709600.1|	-	0.068	12.6	0.0	0.12	11.7	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_Gly3P_dh_N	PF01210.18	gi|297621463|ref|YP_003709600.1|	-	0.099	12.3	0.0	0.16	11.7	0.0	1.4	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
UDPG_MGDP_dh_N	PF03721.9	gi|297621463|ref|YP_003709600.1|	-	0.12	11.7	0.0	0.19	11.0	0.0	1.3	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
FAD_binding_3	PF01494.14	gi|297621463|ref|YP_003709600.1|	-	0.16	11.0	0.0	0.26	10.2	0.0	1.3	1	0	0	1	1	1	0	FAD	binding	domain
CagY_I	PF14585.1	gi|297621464|ref|YP_003709601.1|	-	0.085	12.7	0.5	15	5.6	0.2	2.7	1	1	1	2	2	2	0	CagY	type	1	repeat
DUF92	PF01940.11	gi|297621465|ref|YP_003709602.1|	-	2.8	7.0	13.4	0.3	10.2	0.2	3.3	1	1	2	3	3	3	0	Integral	membrane	protein	DUF92
Citrate_synt	PF00285.16	gi|297621466|ref|YP_003709603.1|	-	3e-89	299.2	0.0	3.4e-89	299.0	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
Ldh_1_C	PF02866.13	gi|297621467|ref|YP_003709604.1|	-	2.9e-38	131.3	0.0	7.2e-38	130.0	0.0	1.6	2	0	0	2	2	2	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
Ldh_1_N	PF00056.18	gi|297621467|ref|YP_003709604.1|	-	7.7e-30	103.5	0.0	1.2e-29	102.9	0.0	1.3	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Radical_SAM	PF04055.16	gi|297621468|ref|YP_003709605.1|	-	1.3e-16	61.2	0.1	2.4e-16	60.3	0.0	1.5	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|297621468|ref|YP_003709605.1|	-	3.9e-15	55.9	0.1	7e-15	55.1	0.0	1.5	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|297621468|ref|YP_003709605.1|	-	3.7e-06	27.1	0.1	7.3e-06	26.1	0.1	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
QueC	PF06508.8	gi|297621469|ref|YP_003709606.1|	-	6.6e-63	211.7	0.0	7.3e-63	211.6	0.0	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.16	gi|297621469|ref|YP_003709606.1|	-	6.2e-09	35.7	0.0	7.8e-09	35.3	0.0	1.1	1	0	0	1	1	1	1	Asparagine	synthase
ThiI	PF02568.9	gi|297621469|ref|YP_003709606.1|	-	6e-07	29.1	0.0	0.00066	19.1	0.0	2.1	2	0	0	2	2	2	2	Thiamine	biosynthesis	protein	(ThiI)
PAPS_reduct	PF01507.14	gi|297621469|ref|YP_003709606.1|	-	5.6e-05	23.0	0.0	0.0016	18.3	0.0	2.1	2	0	0	2	2	2	1	Phosphoadenosine	phosphosulfate	reductase	family
NAD_synthase	PF02540.12	gi|297621469|ref|YP_003709606.1|	-	0.00011	21.1	0.0	0.00015	20.7	0.0	1.2	1	0	0	1	1	1	1	NAD	synthase
ATP_bind_3	PF01171.15	gi|297621469|ref|YP_003709606.1|	-	0.00012	21.6	0.0	0.0005	19.6	0.0	1.8	2	0	0	2	2	2	1	PP-loop	family
tRNA_Me_trans	PF03054.11	gi|297621469|ref|YP_003709606.1|	-	0.023	13.2	0.0	0.029	12.9	0.0	1.2	1	0	0	1	1	1	0	tRNA	methyl	transferase
RNA_pol_A_CTD	PF03118.10	gi|297621470|ref|YP_003709607.1|	-	0.007	15.7	0.0	0.014	14.7	0.0	1.5	1	0	0	1	1	1	1	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
Y_phosphatase3	PF13350.1	gi|297621472|ref|YP_003709609.1|	-	0.00052	20.3	0.1	0.0083	16.3	0.0	2.5	3	0	0	3	3	3	1	Tyrosine	phosphatase	family
DUF4473	PF14747.1	gi|297621472|ref|YP_003709609.1|	-	0.24	11.6	2.3	0.49	10.6	1.6	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4473)
DUF4391	PF14335.1	gi|297621472|ref|YP_003709609.1|	-	6.7	6.0	8.4	9.8	5.4	5.8	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4391)
Peptidase_S55	PF05580.7	gi|297621474|ref|YP_003709611.1|	-	0.049	13.0	0.1	0.058	12.8	0.1	1.1	1	0	0	1	1	1	0	SpoIVB	peptidase	S55
DUF1157	PF06636.6	gi|297621474|ref|YP_003709611.1|	-	0.069	11.7	0.1	0.1	11.1	0.0	1.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1157)
HtrL_YibB	PF09612.5	gi|297621475|ref|YP_003709612.1|	-	0.0044	16.3	0.3	0.0044	16.3	0.2	1.8	2	0	0	2	2	2	1	Bacterial	protein	of	unknown	function	(HtrL_YibB)
CSTF2_hinge	PF14327.1	gi|297621475|ref|YP_003709612.1|	-	0.085	12.9	0.7	0.54	10.3	0.1	2.5	2	1	1	3	3	3	0	Hinge	domain	of	cleavage	stimulation	factor	subunit	2
ADK	PF00406.17	gi|297621476|ref|YP_003709613.1|	-	5.2e-53	178.9	0.0	6.3e-53	178.6	0.0	1.1	1	0	0	1	1	1	1	Adenylate	kinase
ADK_lid	PF05191.9	gi|297621476|ref|YP_003709613.1|	-	4.5e-13	48.6	0.6	8.4e-13	47.7	0.4	1.4	1	0	0	1	1	1	1	Adenylate	kinase,	active	site	lid
AAA_17	PF13207.1	gi|297621476|ref|YP_003709613.1|	-	7.2e-10	39.7	0.0	1.5e-09	38.7	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|297621476|ref|YP_003709613.1|	-	7.2e-06	25.9	0.0	1.5e-05	24.9	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|297621476|ref|YP_003709613.1|	-	8.4e-06	26.1	0.0	1.5e-05	25.2	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|297621476|ref|YP_003709613.1|	-	0.00017	20.7	0.0	0.0003	19.9	0.0	1.4	1	1	0	1	1	1	1	Zeta	toxin
AAA	PF00004.24	gi|297621476|ref|YP_003709613.1|	-	0.0018	18.4	0.0	0.0028	17.8	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|297621476|ref|YP_003709613.1|	-	0.0023	17.1	0.0	0.0035	16.5	0.0	1.3	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
ANF_receptor	PF01094.23	gi|297621476|ref|YP_003709613.1|	-	0.0099	14.7	0.0	0.013	14.2	0.0	1.2	1	0	0	1	1	1	1	Receptor	family	ligand	binding	region
AAA_19	PF13245.1	gi|297621476|ref|YP_003709613.1|	-	0.013	15.2	0.0	0.032	13.9	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_22	PF13401.1	gi|297621476|ref|YP_003709613.1|	-	0.018	15.1	0.0	0.031	14.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DUF1272	PF06906.6	gi|297621476|ref|YP_003709613.1|	-	0.03	14.1	0.5	0.067	13.0	0.3	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
ABC_tran	PF00005.22	gi|297621476|ref|YP_003709613.1|	-	0.037	14.3	0.0	0.043	14.1	0.0	1.3	1	0	0	1	1	1	0	ABC	transporter
RuvB_N	PF05496.7	gi|297621476|ref|YP_003709613.1|	-	0.041	12.9	0.0	0.066	12.2	0.0	1.3	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
KTI12	PF08433.5	gi|297621476|ref|YP_003709613.1|	-	0.062	12.5	0.0	0.087	12.0	0.0	1.2	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
Cytidylate_kin2	PF13189.1	gi|297621476|ref|YP_003709613.1|	-	0.079	12.8	0.0	0.11	12.3	0.0	1.4	1	0	0	1	1	1	0	Cytidylate	kinase-like	family
AAA_5	PF07728.9	gi|297621476|ref|YP_003709613.1|	-	0.08	12.6	0.0	0.16	11.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
NACHT	PF05729.7	gi|297621476|ref|YP_003709613.1|	-	0.13	11.8	0.1	0.33	10.5	0.0	1.7	2	0	0	2	2	2	0	NACHT	domain
Beta-Casp	PF10996.3	gi|297621477|ref|YP_003709614.1|	-	0.046	13.6	0.0	0.078	12.9	0.0	1.5	1	0	0	1	1	1	0	Beta-Casp	domain
Ank_2	PF12796.2	gi|297621479|ref|YP_003709616.1|	-	7.4e-19	67.8	0.0	0.00018	21.7	0.0	6.0	1	1	3	4	4	4	3	Ankyrin	repeats	(3	copies)
Ank_4	PF13637.1	gi|297621479|ref|YP_003709616.1|	-	9.6e-15	54.6	0.0	0.039	14.4	0.0	7.2	6	2	1	7	7	7	3	Ankyrin	repeats	(many	copies)
Ank_3	PF13606.1	gi|297621479|ref|YP_003709616.1|	-	1.2e-12	46.7	0.0	3.7	8.0	0.0	9.1	9	1	0	9	9	9	3	Ankyrin	repeat
Ank	PF00023.25	gi|297621479|ref|YP_003709616.1|	-	9.2e-12	44.1	1.1	1.3	9.0	0.0	8.7	9	2	0	9	9	9	3	Ankyrin	repeat
Ank_5	PF13857.1	gi|297621479|ref|YP_003709616.1|	-	6.3e-08	32.6	0.1	7.8	6.9	0.0	6.9	5	3	1	6	6	6	1	Ankyrin	repeats	(many	copies)
Chalcone	PF02431.10	gi|297621480|ref|YP_003709617.1|	-	7.5e-11	41.7	0.0	1.3e-09	37.7	0.0	2.0	1	1	0	1	1	1	1	Chalcone-flavanone	isomerase
Hist_deacetyl	PF00850.14	gi|297621481|ref|YP_003709618.1|	-	1.7e-90	303.4	0.1	2.1e-90	303.1	0.1	1.0	1	0	0	1	1	1	1	Histone	deacetylase	domain
Na_sulph_symp	PF00939.14	gi|297621482|ref|YP_003709619.1|	-	6.4e-147	490.2	41.9	7.7e-147	489.9	29.1	1.0	1	0	0	1	1	1	1	Sodium:sulfate	symporter	transmembrane	region
H_PPase	PF03030.11	gi|297621483|ref|YP_003709620.1|	-	2.6e-268	891.8	39.3	3.1e-268	891.6	27.3	1.0	1	0	0	1	1	1	1	Inorganic	H+	pyrophosphatase
TMEM107	PF14995.1	gi|297621483|ref|YP_003709620.1|	-	0.4	10.7	5.9	2	8.5	0.0	3.8	4	1	1	5	5	5	0	Transmembrane	protein
TRIQK	PF15168.1	gi|297621483|ref|YP_003709620.1|	-	3.3	7.7	4.7	28	4.7	0.2	3.8	3	0	0	3	3	3	0	Triple	QxxK/R	motif-containing	protein	family
Pam17	PF08566.5	gi|297621483|ref|YP_003709620.1|	-	5.2	6.7	5.2	2.5	7.7	0.5	2.6	2	0	0	2	2	2	0	Mitochondrial	import	protein	Pam17
AA_permease_2	PF13520.1	gi|297621484|ref|YP_003709621.1|	-	1e-71	241.7	52.0	1.2e-71	241.5	36.0	1.0	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|297621484|ref|YP_003709621.1|	-	5.3e-29	100.8	41.9	6.8e-29	100.5	29.0	1.0	1	0	0	1	1	1	1	Amino	acid	permease
DUF2535	PF10751.4	gi|297621485|ref|YP_003709622.1|	-	0.047	13.8	1.5	0.085	13.0	0.1	2.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2535)
DUF750	PF04721.12	gi|297621485|ref|YP_003709622.1|	-	0.13	12.3	0.4	0.39	10.7	0.2	1.9	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF750)
FMN_red	PF03358.10	gi|297621486|ref|YP_003709623.1|	-	3.5e-39	133.7	0.0	4.3e-39	133.4	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.12	gi|297621486|ref|YP_003709623.1|	-	2.7e-11	43.3	0.0	3.1e-11	43.1	0.0	1.1	1	0	0	1	1	1	1	Flavodoxin-like	fold
Host_attach	PF10116.4	gi|297621487|ref|YP_003709624.1|	-	9.7e-32	110.0	0.0	1.2e-31	109.8	0.0	1.0	1	0	0	1	1	1	1	Protein	required	for	attachment	to	host	cells
Wyosine_form	PF08608.7	gi|297621487|ref|YP_003709624.1|	-	0.059	13.4	0.0	0.11	12.6	0.0	1.4	1	0	0	1	1	1	0	Wyosine	base	formation
VitD-bind_III	PF09164.5	gi|297621488|ref|YP_003709625.1|	-	0.0036	16.8	0.0	0.013	15.1	0.0	2.0	1	0	0	1	1	1	1	Vitamin	D	binding	protein,	domain	III
Sel1	PF08238.7	gi|297621489|ref|YP_003709626.1|	-	1.2e-158	512.1	89.2	4e-11	43.1	0.8	16.4	16	1	0	16	16	16	16	Sel1	repeat
TPR_11	PF13414.1	gi|297621489|ref|YP_003709626.1|	-	3e-11	42.7	55.0	0.016	14.8	0.9	9.2	4	3	7	11	11	11	8	TPR	repeat
TPR_6	PF13174.1	gi|297621489|ref|YP_003709626.1|	-	5.8e-07	29.5	37.1	0.93	10.0	0.0	10.8	12	0	0	12	12	12	4	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|297621489|ref|YP_003709626.1|	-	0.0046	17.4	28.4	7.2	7.5	0.2	10.8	7	4	6	13	13	13	2	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|297621489|ref|YP_003709626.1|	-	0.0069	16.1	24.3	1.8	8.5	0.1	9.4	9	2	1	10	10	10	2	Tetratricopeptide	repeat
Flu_M1_C	PF08289.6	gi|297621489|ref|YP_003709626.1|	-	0.37	10.8	4.0	44	4.2	0.1	4.3	5	0	0	5	5	5	0	Influenza	Matrix	protein	(M1)	C-terminal	domain
CBM_X	PF06204.6	gi|297621490|ref|YP_003709627.1|	-	0.00049	19.5	0.0	0.00058	19.2	0.0	1.1	1	0	0	1	1	1	1	Putative	carbohydrate	binding	domain
PgaD	PF13994.1	gi|297621490|ref|YP_003709627.1|	-	0.079	12.4	0.2	0.086	12.3	0.2	1.0	1	0	0	1	1	1	0	PgaD-like	protein
ATP-synt_8	PF00895.15	gi|297621490|ref|YP_003709627.1|	-	0.35	11.1	1.7	0.53	10.5	1.2	1.3	1	0	0	1	1	1	0	ATP	synthase	protein	8
Histone	PF00125.19	gi|297621491|ref|YP_003709628.1|	-	0.00062	19.8	0.2	0.0012	18.8	0.1	1.5	1	1	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
DUF1931	PF09123.6	gi|297621491|ref|YP_003709628.1|	-	0.0046	16.9	0.5	0.0052	16.7	0.4	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1931)
Alb1	PF09135.6	gi|297621491|ref|YP_003709628.1|	-	0.0066	17.0	2.0	0.0074	16.8	1.4	1.1	1	0	0	1	1	1	1	Alb1
DNA_pol_A_exo1	PF01612.15	gi|297621491|ref|YP_003709628.1|	-	0.04	13.3	0.1	0.041	13.3	0.1	1.1	1	0	0	1	1	1	0	3'-5'	exonuclease
CBFD_NFYB_HMF	PF00808.18	gi|297621491|ref|YP_003709628.1|	-	0.1	12.6	2.0	0.18	11.8	1.4	1.4	1	1	0	1	1	1	0	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
SapB_1	PF05184.10	gi|297621491|ref|YP_003709628.1|	-	0.39	10.5	1.8	19	5.2	0.0	2.2	2	0	0	2	2	2	0	Saposin-like	type	B,	region	1
Acyl-CoA_dh_1	PF00441.19	gi|297621492|ref|YP_003709629.1|	-	1.6e-32	112.7	4.1	1.3e-31	109.7	0.7	2.2	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|297621492|ref|YP_003709629.1|	-	2.6e-19	69.8	0.0	1.7e-18	67.2	0.0	2.3	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|297621492|ref|YP_003709629.1|	-	1e-17	63.3	0.2	2.1e-17	62.3	0.1	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|297621492|ref|YP_003709629.1|	-	1.2e-05	25.5	0.2	7.3e-05	23.0	0.1	2.3	1	1	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
HpaB_N	PF11794.3	gi|297621492|ref|YP_003709629.1|	-	1.9e-05	24.2	0.1	4.6e-05	22.9	0.1	1.6	1	1	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
DUF1551	PF07585.6	gi|297621493|ref|YP_003709630.1|	-	8e-05	21.6	0.1	0.00022	20.2	0.1	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1551)
Legionella_OMP	PF05150.7	gi|297621493|ref|YP_003709630.1|	-	0.0031	16.6	0.1	0.0031	16.6	0.0	2.2	2	1	0	2	2	2	1	Legionella	pneumophila	major	outer	membrane	protein	precursor
3HCDH_N	PF02737.13	gi|297621495|ref|YP_003709632.1|	-	1.2e-58	197.6	0.1	8.1e-58	195.0	0.0	2.1	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ECH	PF00378.15	gi|297621495|ref|YP_003709632.1|	-	8.3e-52	175.7	0.0	1.5e-51	174.9	0.0	1.3	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH	PF00725.17	gi|297621495|ref|YP_003709632.1|	-	8.1e-28	96.6	0.3	2.7e-21	75.7	0.1	2.7	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|297621496|ref|YP_003709633.1|	-	3.5e-82	275.3	0.0	4.9e-82	274.8	0.0	1.2	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|297621496|ref|YP_003709633.1|	-	4e-45	152.2	0.3	9e-45	151.0	0.2	1.6	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|297621496|ref|YP_003709633.1|	-	5.2e-07	29.4	0.2	4e-06	26.4	0.0	2.4	3	0	0	3	3	3	1	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|297621496|ref|YP_003709633.1|	-	0.02	14.5	0.2	1.9	8.1	0.0	2.4	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
AMP-binding	PF00501.23	gi|297621497|ref|YP_003709634.1|	-	2e-79	266.9	0.0	2.7e-79	266.4	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
DUF643	PF04867.7	gi|297621498|ref|YP_003709635.1|	-	0.0033	17.8	0.4	0.025	14.9	0.0	2.1	1	1	0	2	2	2	1	Protein	of	unknown	function	(DUF643)
BicD	PF09730.4	gi|297621498|ref|YP_003709635.1|	-	0.0087	14.4	0.4	0.0095	14.3	0.2	1.1	1	0	0	1	1	1	1	Microtubule-associated	protein	Bicaudal-D
DUF447	PF04289.7	gi|297621498|ref|YP_003709635.1|	-	0.013	15.0	0.3	0.019	14.5	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF447)
DUF310	PF03750.8	gi|297621498|ref|YP_003709635.1|	-	0.014	15.6	0.2	0.12	12.6	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF310)
Trp_dioxygenase	PF03301.8	gi|297621498|ref|YP_003709635.1|	-	0.014	14.5	0.5	0.02	14.0	0.4	1.4	1	1	0	1	1	1	0	Tryptophan	2,3-dioxygenase
Cauli_AT	PF03233.8	gi|297621498|ref|YP_003709635.1|	-	0.021	14.5	0.8	0.047	13.3	0.4	1.7	2	0	0	2	2	2	0	Aphid	transmission	protein
Sec5	PF15469.1	gi|297621498|ref|YP_003709635.1|	-	0.044	13.5	1.1	0.19	11.4	0.3	1.9	1	1	1	2	2	2	0	Exocyst	complex	component	Sec5
DDE_3	PF13358.1	gi|297621499|ref|YP_003709636.1|	-	7.9e-29	100.2	0.0	1.3e-28	99.6	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.1	gi|297621499|ref|YP_003709636.1|	-	7.4e-19	67.0	0.1	1.9e-18	65.7	0.1	1.7	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_29	PF13551.1	gi|297621499|ref|YP_003709636.1|	-	9.3e-10	38.6	0.0	2.4e-09	37.3	0.0	1.7	2	0	0	2	2	1	1	Winged	helix-turn	helix
rve	PF00665.21	gi|297621499|ref|YP_003709636.1|	-	3.7e-09	36.7	0.0	5.6e-08	32.9	0.0	2.3	2	0	0	2	2	2	1	Integrase	core	domain
HTH_23	PF13384.1	gi|297621499|ref|YP_003709636.1|	-	7.2e-07	28.6	0.0	2e-06	27.2	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|297621499|ref|YP_003709636.1|	-	2.2e-05	24.3	0.1	8.5e-05	22.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|297621499|ref|YP_003709636.1|	-	0.0003	20.1	0.0	0.00064	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
DDE_Tnp_ISAZ013	PF07592.6	gi|297621499|ref|YP_003709636.1|	-	0.0023	16.7	0.2	0.11	11.2	0.1	2.2	2	0	0	2	2	2	1	Rhodopirellula	transposase	DDE	domain
Terminase_5	PF06056.7	gi|297621499|ref|YP_003709636.1|	-	0.0027	17.2	0.0	0.0054	16.2	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
rve_3	PF13683.1	gi|297621499|ref|YP_003709636.1|	-	0.0041	16.6	0.0	0.014	14.9	0.0	1.9	2	0	0	2	2	1	1	Integrase	core	domain
Sigma70_r4	PF04545.11	gi|297621499|ref|YP_003709636.1|	-	0.012	14.9	0.0	0.034	13.4	0.0	1.8	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_40	PF14493.1	gi|297621499|ref|YP_003709636.1|	-	0.015	15.5	0.0	0.039	14.1	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_32	PF13565.1	gi|297621499|ref|YP_003709636.1|	-	0.032	15.0	1.9	5	7.9	0.0	3.5	2	1	2	4	4	3	0	Homeodomain-like	domain
HTH_38	PF13936.1	gi|297621499|ref|YP_003709636.1|	-	0.048	13.2	0.2	0.88	9.1	0.1	2.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|297621499|ref|YP_003709636.1|	-	0.065	12.8	0.0	0.16	11.6	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
GerE	PF00196.14	gi|297621499|ref|YP_003709636.1|	-	0.081	12.2	0.1	0.3	10.4	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.1	gi|297621499|ref|YP_003709636.1|	-	1.8	8.9	6.1	6	7.2	0.2	3.3	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
ATG22	PF11700.3	gi|297621500|ref|YP_003709637.1|	-	6.7e-65	219.4	42.3	1.1e-63	215.3	29.3	2.1	1	1	0	1	1	1	1	Vacuole	effluxer	Atg22	like
MFS_1	PF07690.11	gi|297621500|ref|YP_003709637.1|	-	2.3e-25	89.0	84.3	1.8e-18	66.4	34.0	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Col_cuticle_N	PF01484.12	gi|297621501|ref|YP_003709638.1|	-	0.03	14.0	0.9	0.048	13.3	0.3	1.5	1	1	0	1	1	1	0	Nematode	cuticle	collagen	N-terminal	domain
TA0956	PF11513.3	gi|297621501|ref|YP_003709638.1|	-	0.1	12.6	0.7	0.53	10.3	0.3	1.8	1	1	1	2	2	2	0	Thermoplasma	acidophilum	protein	TA0956
Glycos_transf_2	PF00535.21	gi|297621502|ref|YP_003709639.1|	-	1.1e-20	73.9	0.0	1.8e-20	73.3	0.0	1.3	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|297621502|ref|YP_003709639.1|	-	1.5e-08	34.7	0.0	4.3e-08	33.2	0.0	1.6	1	1	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|297621502|ref|YP_003709639.1|	-	0.028	13.4	0.0	0.033	13.2	0.0	1.3	1	0	0	1	1	1	0	Glycosyltransferase	like	family	2
tRNA_synt_2f	PF02092.12	gi|297621503|ref|YP_003709640.1|	-	4.4e-186	619.6	0.0	5.9e-186	619.2	0.0	1.2	1	0	0	1	1	1	1	Glycyl-tRNA	synthetase	beta	subunit
tRNA-synt_2e	PF02091.10	gi|297621503|ref|YP_003709640.1|	-	2.4e-151	502.6	0.2	4.2e-151	501.8	0.1	1.4	1	0	0	1	1	1	1	Glycyl-tRNA	synthetase	alpha	subunit
DALR_1	PF05746.10	gi|297621503|ref|YP_003709640.1|	-	3e-07	30.4	3.1	3e-07	30.4	2.1	2.2	2	0	0	2	2	2	1	DALR	anticodon	binding	domain
PK	PF00224.16	gi|297621504|ref|YP_003709641.1|	-	1.3e-129	431.8	0.2	1.6e-129	431.5	0.1	1.1	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.11	gi|297621504|ref|YP_003709641.1|	-	2.1e-29	101.4	0.0	3.9e-29	100.5	0.0	1.5	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.9	gi|297621504|ref|YP_003709641.1|	-	0.00014	20.8	0.0	0.0003	19.7	0.0	1.6	1	1	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
IMPDH	PF00478.20	gi|297621504|ref|YP_003709641.1|	-	0.08	11.8	0.0	0.31	9.9	0.0	1.8	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
HMA	PF00403.21	gi|297621505|ref|YP_003709642.1|	-	2.7e-05	24.2	0.1	4.8e-05	23.4	0.0	1.4	1	0	0	1	1	1	1	Heavy-metal-associated	domain
SMI1_KNR4	PF09346.5	gi|297621506|ref|YP_003709643.1|	-	0.033	14.2	0.3	1.3	9.0	0.0	2.9	3	0	0	3	3	3	0	SMI1	/	KNR4	family	(SUKH-1)
IRS	PF02174.12	gi|297621507|ref|YP_003709644.1|	-	0.14	11.7	0.0	0.2	11.2	0.0	1.3	1	0	0	1	1	1	0	PTB	domain	(IRS-1	type)
MRP-S27	PF10037.4	gi|297621508|ref|YP_003709645.1|	-	0.026	13.4	4.9	0.03	13.2	3.4	1.1	1	0	0	1	1	1	0	Mitochondrial	28S	ribosomal	protein	S27
Mto2_bdg	PF12808.2	gi|297621509|ref|YP_003709646.1|	-	1	9.5	5.3	1.6	8.8	0.2	2.4	2	0	0	2	2	2	0	Micro-tubular	organiser	Mto1	C-term	Mto2-binding	region
DnaG_DnaB_bind	PF08278.6	gi|297621509|ref|YP_003709646.1|	-	3.3	7.9	8.3	2.1	8.6	2.1	2.1	2	0	0	2	2	2	0	DNA	primase	DnaG	DnaB-binding
FGE-sulfatase	PF03781.11	gi|297621510|ref|YP_003709647.1|	-	3.3e-12	46.3	0.1	5e-11	42.4	0.0	2.1	1	1	1	2	2	2	1	Sulfatase-modifying	factor	enzyme	1
LysM	PF01476.15	gi|297621511|ref|YP_003709648.1|	-	0.0044	16.8	0.0	0.014	15.2	0.0	2.0	1	0	0	1	1	1	1	LysM	domain
Reo_sigmaC	PF04582.7	gi|297621511|ref|YP_003709648.1|	-	0.11	11.6	20.4	0.41	9.7	0.3	3.5	2	1	0	3	3	3	0	Reovirus	sigma	C	capsid	protein
ATG16	PF08614.6	gi|297621511|ref|YP_003709648.1|	-	0.73	9.6	54.6	1.5	8.6	12.9	4.0	1	1	3	4	4	4	0	Autophagy	protein	16	(ATG16)
DUF3584	PF12128.3	gi|297621511|ref|YP_003709648.1|	-	0.98	6.6	55.0	0.43	7.8	13.9	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3584)
DUF3828	PF12883.2	gi|297621511|ref|YP_003709648.1|	-	3.5	7.5	9.5	0.46	10.4	0.5	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3828)
ABC_tran	PF00005.22	gi|297621512|ref|YP_003709649.1|	-	1.6e-41	141.7	3.7	2.7e-10	40.6	0.0	8.2	6	2	0	6	6	6	6	ABC	transporter
SMC_N	PF02463.14	gi|297621512|ref|YP_003709649.1|	-	4.1e-16	58.8	0.0	0.023	13.9	0.0	7.3	5	2	0	5	5	5	4	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|297621512|ref|YP_003709649.1|	-	2.9e-15	55.5	2.1	0.025	14.0	0.1	4.6	4	0	0	4	4	4	4	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|297621512|ref|YP_003709649.1|	-	1.3e-13	51.3	3.1	0.0088	16.0	0.0	5.5	5	1	0	5	5	4	3	AAA	ATPase	domain
DUF258	PF03193.11	gi|297621512|ref|YP_003709649.1|	-	3.3e-11	42.6	1.9	0.05	12.7	0.0	4.4	4	0	0	4	4	4	4	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|297621512|ref|YP_003709649.1|	-	6.2e-10	39.3	5.4	0.24	11.5	0.0	6.1	7	0	0	7	7	4	2	AAA	domain
AAA_33	PF13671.1	gi|297621512|ref|YP_003709649.1|	-	1.6e-09	37.8	0.3	0.74	9.6	0.0	4.7	4	0	0	4	4	4	2	AAA	domain
AAA_17	PF13207.1	gi|297621512|ref|YP_003709649.1|	-	2e-08	35.0	7.3	0.66	10.7	0.0	5.6	4	0	0	4	4	4	2	AAA	domain
AAA_25	PF13481.1	gi|297621512|ref|YP_003709649.1|	-	6.3e-08	32.2	2.2	0.37	10.1	0.0	5.4	6	0	0	6	6	5	2	AAA	domain
AAA_14	PF13173.1	gi|297621512|ref|YP_003709649.1|	-	1.2e-07	31.6	0.1	1.7	8.5	0.0	6.1	6	1	0	6	6	6	1	AAA	domain
AAA_10	PF12846.2	gi|297621512|ref|YP_003709649.1|	-	2.7e-07	30.3	0.2	0.29	10.5	0.0	4.5	4	0	0	4	4	4	1	AAA-like	domain
Viral_helicase1	PF01443.13	gi|297621512|ref|YP_003709649.1|	-	3.1e-07	30.1	0.2	0.077	12.5	0.0	3.9	3	0	0	3	3	3	2	Viral	(Superfamily	1)	RNA	helicase
MobB	PF03205.9	gi|297621512|ref|YP_003709649.1|	-	3.7e-07	29.9	1.8	0.077	12.6	0.0	4.5	4	0	0	4	4	4	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|297621512|ref|YP_003709649.1|	-	4e-07	29.8	0.1	0.018	14.7	0.0	4.6	4	0	0	4	4	4	1	NACHT	domain
DnaJ_CXXCXGXG	PF00684.14	gi|297621512|ref|YP_003709649.1|	-	8.3e-07	28.9	14.4	0.19	11.8	0.6	6.3	6	0	0	6	6	6	2	DnaJ	central	domain
AAA_21	PF13304.1	gi|297621512|ref|YP_003709649.1|	-	8.3e-07	29.2	36.1	0.0015	18.5	0.1	7.8	9	0	0	9	9	7	4	AAA	domain
AAA_23	PF13476.1	gi|297621512|ref|YP_003709649.1|	-	8.3e-07	29.5	9.3	0.32	11.2	0.1	5.2	5	0	0	5	5	4	1	AAA	domain
AAA_18	PF13238.1	gi|297621512|ref|YP_003709649.1|	-	1.3e-06	28.7	6.0	0.69	10.2	0.0	5.2	5	0	0	5	5	4	2	AAA	domain
AAA_15	PF13175.1	gi|297621512|ref|YP_003709649.1|	-	4.6e-06	25.9	7.4	1.6	7.6	0.0	6.7	8	0	0	8	8	8	1	AAA	ATPase	domain
APS_kinase	PF01583.15	gi|297621512|ref|YP_003709649.1|	-	3.2e-05	23.6	1.6	9.1	5.9	0.1	4.5	4	0	0	4	4	4	0	Adenylylsulphate	kinase
cobW	PF02492.14	gi|297621512|ref|YP_003709649.1|	-	0.00018	21.0	2.4	0.5	9.7	0.1	4.3	4	0	0	4	4	4	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_19	PF13245.1	gi|297621512|ref|YP_003709649.1|	-	0.00019	21.1	0.9	4.4	7.1	0.1	4.6	4	0	0	4	4	4	0	Part	of	AAA	domain
Miro	PF08477.8	gi|297621512|ref|YP_003709649.1|	-	0.00033	21.1	0.8	10	6.6	0.0	4.8	4	0	0	4	4	4	0	Miro-like	protein
RNA_helicase	PF00910.17	gi|297621512|ref|YP_003709649.1|	-	0.00034	20.7	0.5	31	4.8	0.0	4.5	4	0	0	4	4	4	0	RNA	helicase
ArgK	PF03308.11	gi|297621512|ref|YP_003709649.1|	-	0.00073	18.4	0.7	0.18	10.5	0.0	3.3	3	0	0	3	3	3	1	ArgK	protein
RNA12	PF10443.4	gi|297621512|ref|YP_003709649.1|	-	0.0011	17.5	0.3	3.3	6.1	0.0	3.8	4	0	0	4	4	4	1	RNA12	protein
DAP3	PF10236.4	gi|297621512|ref|YP_003709649.1|	-	0.0022	16.9	3.0	0.047	12.6	0.1	3.7	4	0	0	4	4	4	1	Mitochondrial	ribosomal	death-associated	protein	3
NTPase_1	PF03266.10	gi|297621512|ref|YP_003709649.1|	-	0.0023	17.6	1.4	0.17	11.5	0.1	3.5	3	0	0	3	3	3	1	NTPase
DUF2075	PF09848.4	gi|297621512|ref|YP_003709649.1|	-	0.0076	15.2	0.2	15	4.4	0.0	4.4	4	0	0	4	4	4	0	Uncharacterized	conserved	protein	(DUF2075)
KaiC	PF06745.8	gi|297621512|ref|YP_003709649.1|	-	0.008	15.3	0.8	23	4.0	0.0	4.4	4	0	0	4	4	4	0	KaiC
MMR_HSR1	PF01926.18	gi|297621512|ref|YP_003709649.1|	-	0.012	15.6	0.7	25	4.8	0.0	4.4	4	0	0	4	4	4	0	50S	ribosome-binding	GTPase
AAA_30	PF13604.1	gi|297621512|ref|YP_003709649.1|	-	0.014	14.9	0.1	6.4	6.2	0.0	4.0	4	0	0	4	4	4	0	AAA	domain
T2SE	PF00437.15	gi|297621512|ref|YP_003709649.1|	-	0.014	14.2	2.0	26	3.5	0.1	4.2	4	0	0	4	4	4	0	Type	II/IV	secretion	system	protein
PhoH	PF02562.11	gi|297621512|ref|YP_003709649.1|	-	0.017	14.3	0.1	1.2	8.3	0.0	3.2	3	0	0	3	3	2	0	PhoH-like	protein
IstB_IS21	PF01695.12	gi|297621512|ref|YP_003709649.1|	-	0.018	14.4	0.3	27	4.0	0.0	4.4	4	0	0	4	4	4	0	IstB-like	ATP	binding	protein
SbcCD_C	PF13558.1	gi|297621512|ref|YP_003709649.1|	-	0.028	14.3	2.3	15	5.5	0.0	4.9	4	2	0	4	4	4	0	Putative	exonuclease	SbcCD,	C	subunit
PRK	PF00485.13	gi|297621512|ref|YP_003709649.1|	-	0.03	13.8	2.6	4.7	6.7	0.0	4.1	4	0	0	4	4	4	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_28	PF13521.1	gi|297621512|ref|YP_003709649.1|	-	0.048	13.6	1.9	48	3.8	0.1	4.5	4	0	0	4	4	4	0	AAA	domain
UPF0079	PF02367.12	gi|297621512|ref|YP_003709649.1|	-	0.062	12.9	0.1	32	4.1	0.0	3.7	4	0	0	4	4	4	0	Uncharacterised	P-loop	hydrolase	UPF0079
DUF815	PF05673.8	gi|297621512|ref|YP_003709649.1|	-	0.14	11.0	0.6	19	4.0	0.0	3.5	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF815)
CobU	PF02283.11	gi|297621512|ref|YP_003709649.1|	-	0.32	10.3	2.7	11	5.4	0.0	3.9	4	0	0	4	4	3	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
G-alpha	PF00503.15	gi|297621512|ref|YP_003709649.1|	-	2.1	6.9	3.3	5.2	5.6	0.1	2.7	3	0	0	3	3	2	0	G-protein	alpha	subunit
CPT	PF07931.7	gi|297621512|ref|YP_003709649.1|	-	2.6	7.6	5.8	47	3.5	0.0	4.2	5	0	0	5	5	5	0	Chloramphenicol	phosphotransferase-like	protein
FtsK_SpoIIIE	PF01580.13	gi|297621512|ref|YP_003709649.1|	-	3.3	7.1	4.3	21	4.4	0.1	3.5	4	0	0	4	4	4	0	FtsK/SpoIIIE	family
ATP-grasp_4	PF13535.1	gi|297621513|ref|YP_003709650.1|	-	0.0012	18.6	0.0	0.0029	17.3	0.0	1.7	2	0	0	2	2	2	1	ATP-grasp	domain
DUF1561	PF07598.6	gi|297621513|ref|YP_003709650.1|	-	0.03	12.2	0.0	0.04	11.8	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1561)
GARS_A	PF01071.14	gi|297621513|ref|YP_003709650.1|	-	0.055	13.0	0.0	0.1	12.1	0.0	1.4	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
PEP-utilisers_N	PF05524.8	gi|297621514|ref|YP_003709651.1|	-	0.048	13.4	0.1	0.15	11.8	0.0	1.9	1	0	0	1	1	1	0	PEP-utilising	enzyme,	N-terminal
Herpes_teg_N	PF04843.7	gi|297621515|ref|YP_003709652.1|	-	0.00012	21.5	0.0	0.00043	19.7	0.0	2.0	2	1	0	2	2	2	1	Herpesvirus	tegument	protein,	N-terminal	conserved	region
FGGY_N	PF00370.16	gi|297621516|ref|YP_003709653.1|	-	6.8e-72	241.7	1.2	1e-71	241.1	0.8	1.3	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
FGGY_C	PF02782.11	gi|297621516|ref|YP_003709653.1|	-	2.1e-46	158.0	0.1	3.4e-46	157.3	0.1	1.3	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
BcrAD_BadFG	PF01869.15	gi|297621516|ref|YP_003709653.1|	-	0.082	12.1	0.0	4.8	6.4	0.0	2.2	2	0	0	2	2	2	0	BadF/BadG/BcrA/BcrD	ATPase	family
Kdo_hydroxy	PF11004.3	gi|297621518|ref|YP_003709655.1|	-	3.6e-111	370.6	0.1	4.1e-111	370.4	0.1	1.0	1	0	0	1	1	1	1	3-deoxy-D-manno-oct-2-ulosonic	acid	(Kdo)	hydroxylase
Ribosomal_L16	PF00252.13	gi|297621518|ref|YP_003709655.1|	-	0.079	12.7	0.0	0.26	11.0	0.0	1.7	1	1	1	2	2	2	0	Ribosomal	protein	L16p/L10e
Abhydrolase_6	PF12697.2	gi|297621519|ref|YP_003709656.1|	-	1.5e-34	119.8	0.0	1.8e-34	119.6	0.0	1.0	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|297621519|ref|YP_003709656.1|	-	1.5e-23	83.6	0.0	5.4e-23	81.7	0.0	1.7	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|297621519|ref|YP_003709656.1|	-	5.1e-17	61.9	0.0	2e-16	60.0	0.0	1.8	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
BAAT_C	PF08840.6	gi|297621519|ref|YP_003709656.1|	-	3.6e-05	23.5	0.0	4.9e-05	23.1	0.0	1.2	1	0	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Abhydrolase_4	PF08386.5	gi|297621519|ref|YP_003709656.1|	-	0.00029	20.6	0.0	0.00048	19.9	0.0	1.4	1	0	0	1	1	1	1	TAP-like	protein
Esterase	PF00756.15	gi|297621519|ref|YP_003709656.1|	-	0.0018	17.7	0.0	0.0022	17.4	0.0	1.3	1	0	0	1	1	1	1	Putative	esterase
DUF1057	PF06342.7	gi|297621519|ref|YP_003709656.1|	-	0.0023	16.8	0.0	0.0025	16.6	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
PGAP1	PF07819.8	gi|297621519|ref|YP_003709656.1|	-	0.0069	15.9	0.0	0.0097	15.5	0.0	1.2	1	0	0	1	1	1	1	PGAP1-like	protein
Ndr	PF03096.9	gi|297621519|ref|YP_003709656.1|	-	0.0095	14.4	0.0	0.048	12.1	0.0	1.9	1	1	0	1	1	1	1	Ndr	family
Tannase	PF07519.6	gi|297621519|ref|YP_003709656.1|	-	0.014	14.1	0.0	0.022	13.4	0.0	1.3	1	0	0	1	1	1	0	Tannase	and	feruloyl	esterase
Chlorophyllase	PF07224.6	gi|297621519|ref|YP_003709656.1|	-	0.017	13.9	0.0	0.025	13.3	0.0	1.2	1	0	0	1	1	1	0	Chlorophyllase
Abhydrolase_3	PF07859.8	gi|297621519|ref|YP_003709656.1|	-	0.02	14.4	0.0	0.026	14.1	0.0	1.2	1	0	0	1	1	1	0	alpha/beta	hydrolase	fold
Thioesterase	PF00975.15	gi|297621519|ref|YP_003709656.1|	-	0.026	14.7	0.0	0.027	14.6	0.0	1.3	1	0	0	1	1	1	0	Thioesterase	domain
FSH1	PF03959.8	gi|297621519|ref|YP_003709656.1|	-	0.047	13.1	0.2	1	8.7	0.0	2.4	2	1	0	2	2	2	0	Serine	hydrolase	(FSH1)
Chlorophyllase2	PF12740.2	gi|297621519|ref|YP_003709656.1|	-	0.068	12.0	0.0	0.096	11.5	0.0	1.2	1	0	0	1	1	1	0	Chlorophyllase	enzyme
DUF915	PF06028.6	gi|297621519|ref|YP_003709656.1|	-	0.075	12.1	0.0	0.12	11.3	0.0	1.3	1	0	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
DLH	PF01738.13	gi|297621519|ref|YP_003709656.1|	-	0.086	12.1	0.0	3.7	6.7	0.0	2.1	2	0	0	2	2	2	0	Dienelactone	hydrolase	family
Mur_ligase_M	PF08245.7	gi|297621520|ref|YP_003709657.1|	-	2.3e-29	102.7	0.0	3.7e-29	102.1	0.0	1.3	1	0	0	1	1	1	1	Mur	ligase	middle	domain
Mur_ligase_C	PF02875.16	gi|297621520|ref|YP_003709657.1|	-	3.9e-07	30.0	0.0	1.8e-06	27.9	0.0	2.1	2	0	0	2	2	2	1	Mur	ligase	family,	glutamate	ligase	domain
Dala_Dala_lig_C	PF07478.8	gi|297621521|ref|YP_003709658.1|	-	1.8e-34	118.8	0.0	4e-34	117.7	0.0	1.5	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
Dala_Dala_lig_N	PF01820.16	gi|297621521|ref|YP_003709658.1|	-	1.2e-24	86.8	0.0	2.2e-24	86.0	0.0	1.4	1	0	0	1	1	1	1	D-ala	D-ala	ligase	N-terminus
ATP-grasp_4	PF13535.1	gi|297621521|ref|YP_003709658.1|	-	8.7e-12	45.1	0.0	2.3e-11	43.7	0.0	1.6	1	1	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|297621521|ref|YP_003709658.1|	-	9.7e-05	21.7	0.0	0.11	11.7	0.0	2.2	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Synapsin_C	PF02750.9	gi|297621521|ref|YP_003709658.1|	-	0.044	12.8	0.0	0.085	11.9	0.0	1.4	1	0	0	1	1	1	0	Synapsin,	ATP	binding	domain
EPSP_synthase	PF00275.15	gi|297621523|ref|YP_003709660.1|	-	1.3e-104	350.0	0.0	1.4e-104	349.8	0.0	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
SKI	PF01202.17	gi|297621524|ref|YP_003709661.1|	-	2.3e-42	144.5	0.0	2.7e-42	144.3	0.0	1.0	1	0	0	1	1	1	1	Shikimate	kinase
AAA_17	PF13207.1	gi|297621524|ref|YP_003709661.1|	-	3e-07	31.2	0.1	4.6e-07	30.6	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|297621524|ref|YP_003709661.1|	-	0.00011	22.4	0.0	0.00025	21.2	0.0	1.6	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|297621524|ref|YP_003709661.1|	-	0.00014	22.1	0.0	0.00023	21.4	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297621524|ref|YP_003709661.1|	-	0.00073	19.5	0.0	0.0017	18.3	0.0	1.6	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_24	PF13479.1	gi|297621524|ref|YP_003709661.1|	-	0.00083	18.9	0.1	0.0012	18.5	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|297621524|ref|YP_003709661.1|	-	0.0011	18.8	0.0	0.0015	18.4	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|297621524|ref|YP_003709661.1|	-	0.0013	18.6	0.1	0.0026	17.6	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
Cytidylate_kin2	PF13189.1	gi|297621524|ref|YP_003709661.1|	-	0.0028	17.5	0.0	0.0051	16.7	0.0	1.5	2	0	0	2	2	1	1	Cytidylate	kinase-like	family
AAA_28	PF13521.1	gi|297621524|ref|YP_003709661.1|	-	0.01	15.8	0.0	0.015	15.3	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|297621524|ref|YP_003709661.1|	-	0.011	15.9	0.0	0.014	15.5	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
PduV-EutP	PF10662.4	gi|297621524|ref|YP_003709661.1|	-	0.021	14.2	0.0	0.036	13.5	0.0	1.3	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
TFIIA_gamma_N	PF02268.11	gi|297621524|ref|YP_003709661.1|	-	0.022	14.3	0.2	0.91	9.1	0.0	2.3	2	0	0	2	2	2	0	Transcription	initiation	factor	IIA,	gamma	subunit,	helical	domain
NACHT	PF05729.7	gi|297621524|ref|YP_003709661.1|	-	0.026	14.2	0.0	0.056	13.1	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
Arch_ATPase	PF01637.13	gi|297621524|ref|YP_003709661.1|	-	0.03	14.0	0.0	0.055	13.1	0.0	1.5	2	0	0	2	2	2	0	Archaeal	ATPase
ABC_tran	PF00005.22	gi|297621524|ref|YP_003709661.1|	-	0.031	14.5	0.0	0.049	13.9	0.0	1.3	1	0	0	1	1	1	0	ABC	transporter
MobB	PF03205.9	gi|297621524|ref|YP_003709661.1|	-	0.049	13.3	0.1	0.096	12.3	0.0	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF258	PF03193.11	gi|297621524|ref|YP_003709661.1|	-	0.064	12.4	0.0	0.095	11.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
SRP54	PF00448.17	gi|297621524|ref|YP_003709661.1|	-	0.07	12.5	0.0	0.1	11.9	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_5	PF07728.9	gi|297621524|ref|YP_003709661.1|	-	0.078	12.7	0.1	0.18	11.5	0.1	1.6	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
MMR_HSR1	PF01926.18	gi|297621524|ref|YP_003709661.1|	-	0.082	12.8	0.1	0.17	11.8	0.0	1.5	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_30	PF13604.1	gi|297621524|ref|YP_003709661.1|	-	0.14	11.7	0.0	0.35	10.4	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
DUF815	PF05673.8	gi|297621524|ref|YP_003709661.1|	-	0.14	11.0	0.0	0.2	10.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
RNA_helicase	PF00910.17	gi|297621524|ref|YP_003709661.1|	-	0.15	12.2	0.0	0.25	11.5	0.0	1.4	1	0	0	1	1	1	0	RNA	helicase
DHQ_synthase	PF01761.15	gi|297621525|ref|YP_003709662.1|	-	1.3e-98	329.0	0.0	1.6e-98	328.8	0.0	1.1	1	0	0	1	1	1	1	3-dehydroquinate	synthase
Fe-ADH_2	PF13685.1	gi|297621525|ref|YP_003709662.1|	-	1.4e-10	40.9	0.0	2.9e-09	36.6	0.0	2.2	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|297621525|ref|YP_003709662.1|	-	0.00018	20.2	0.0	0.01	14.5	0.0	2.1	2	0	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
DUF2704	PF10866.3	gi|297621525|ref|YP_003709662.1|	-	0.063	12.6	0.1	0.11	11.8	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2704)
DHquinase_I	PF01487.10	gi|297621526|ref|YP_003709663.1|	-	5.2e-37	127.6	0.0	2.6e-36	125.3	0.0	2.1	1	1	0	1	1	1	1	Type	I	3-dehydroquinase
Shikimate_dh_N	PF08501.6	gi|297621526|ref|YP_003709663.1|	-	4.4e-27	93.9	0.0	1.1e-26	92.7	0.0	1.7	1	0	0	1	1	1	1	Shikimate	dehydrogenase	substrate	binding	domain
Shikimate_DH	PF01488.15	gi|297621526|ref|YP_003709663.1|	-	3.1e-05	24.0	0.0	8.4e-05	22.6	0.0	1.7	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
THF_DHG_CYH_C	PF02882.14	gi|297621526|ref|YP_003709663.1|	-	0.0004	19.5	0.0	0.00095	18.2	0.0	1.6	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
F420_oxidored	PF03807.12	gi|297621526|ref|YP_003709663.1|	-	0.0052	17.1	0.1	0.018	15.4	0.0	2.0	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
Saccharop_dh	PF03435.13	gi|297621526|ref|YP_003709663.1|	-	0.011	14.7	0.0	1.4	7.8	0.0	2.2	2	0	0	2	2	2	0	Saccharopine	dehydrogenase
ApbA	PF02558.11	gi|297621526|ref|YP_003709663.1|	-	0.047	13.1	0.0	0.085	12.2	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_Gly3P_dh_N	PF01210.18	gi|297621526|ref|YP_003709663.1|	-	0.092	12.4	0.0	0.17	11.5	0.0	1.4	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Pyr_redox_3	PF13738.1	gi|297621526|ref|YP_003709663.1|	-	0.17	11.9	0.0	0.29	11.1	0.0	1.4	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
DUF192	PF02643.10	gi|297621527|ref|YP_003709664.1|	-	2.1e-28	98.1	0.0	3.4e-27	94.2	0.0	2.0	1	1	0	1	1	1	1	Uncharacterized	ACR,	COG1430
ABC2_membrane_5	PF13346.1	gi|297621528|ref|YP_003709665.1|	-	0.00031	20.0	0.5	0.00031	20.0	0.3	1.6	2	0	0	2	2	2	1	ABC-2	family	transporter	protein
Peptidase_M50B	PF13398.1	gi|297621528|ref|YP_003709665.1|	-	0.0048	16.2	1.0	0.0054	16.1	0.7	1.0	1	0	0	1	1	1	1	Peptidase	M50B-like
VirB3	PF05101.8	gi|297621528|ref|YP_003709665.1|	-	2.4	8.2	11.5	1.5	8.8	1.2	2.1	1	1	1	2	2	2	0	Type	IV	secretory	pathway,	VirB3-like	protein
DUF3302	PF11742.3	gi|297621528|ref|YP_003709665.1|	-	4.3	7.2	6.2	0.37	10.6	0.3	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3302)
Pkinase	PF00069.20	gi|297621530|ref|YP_003709667.1|	-	4.1e-45	153.9	0.0	6.7e-45	153.2	0.0	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|297621530|ref|YP_003709667.1|	-	1.5e-27	96.3	0.0	2.4e-27	95.6	0.0	1.3	1	0	0	1	1	1	1	Protein	tyrosine	kinase
APH	PF01636.18	gi|297621530|ref|YP_003709667.1|	-	8.3e-05	22.4	0.0	0.0011	18.7	0.0	2.5	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
Kinase-like	PF14531.1	gi|297621530|ref|YP_003709667.1|	-	0.016	14.1	0.0	0.041	12.8	0.0	1.6	1	0	0	1	1	1	0	Kinase-like
Glyco_transf_8	PF01501.15	gi|297621531|ref|YP_003709668.1|	-	2.3e-05	23.8	0.1	6e-05	22.5	0.0	1.6	2	0	0	2	2	2	1	Glycosyl	transferase	family	8
DUF3413	PF11893.3	gi|297621532|ref|YP_003709669.1|	-	0.041	12.7	0.5	0.079	11.8	0.4	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3413)
DUF2721	PF11026.3	gi|297621532|ref|YP_003709669.1|	-	0.12	12.0	1.4	0.21	11.2	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2721)
Cas_Csa5	PF09702.5	gi|297621534|ref|YP_003709671.1|	-	0.013	15.6	0.0	0.19	11.8	0.0	2.2	2	0	0	2	2	2	0	CRISPR-associated	protein	(Cas_Csa5)
tRNA-synt_1	PF00133.17	gi|297621535|ref|YP_003709672.1|	-	1.3e-185	617.9	5.7	4.3e-173	576.5	2.1	3.7	2	1	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|297621535|ref|YP_003709672.1|	-	1.8e-38	131.7	0.3	3.7e-38	130.6	0.2	1.6	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|297621535|ref|YP_003709672.1|	-	5.9e-26	91.0	1.4	5.4e-09	35.1	0.0	4.2	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
Val_tRNA-synt_C	PF10458.4	gi|297621535|ref|YP_003709672.1|	-	1.2e-13	50.9	13.1	7.7e-13	48.3	8.8	2.5	2	0	0	2	2	2	1	Valyl	tRNA	synthetase	tRNA	binding	arm
tRNA-synt_1_2	PF13603.1	gi|297621535|ref|YP_003709672.1|	-	5e-10	38.9	0.1	2.2e-06	27.0	0.1	2.8	1	1	1	2	2	2	2	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.14	gi|297621535|ref|YP_003709672.1|	-	0.00045	19.4	0.0	0.14	11.2	0.0	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.13	gi|297621535|ref|YP_003709672.1|	-	0.022	13.4	0.0	0.042	12.5	0.0	1.3	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(K)
TcpQ	PF10671.4	gi|297621535|ref|YP_003709672.1|	-	0.049	13.5	0.0	1.3	8.9	0.0	2.6	2	0	0	2	2	2	0	Toxin	co-regulated	pilus	biosynthesis	protein	Q
tRNA-synt_1d	PF00750.14	gi|297621535|ref|YP_003709672.1|	-	0.55	8.9	2.5	0.62	8.8	0.0	2.1	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(R)
Legionella_OMP	PF05150.7	gi|297621536|ref|YP_003709673.1|	-	5.1e-05	22.5	0.2	0.0032	16.6	0.0	2.2	2	0	0	2	2	2	2	Legionella	pneumophila	major	outer	membrane	protein	precursor
Na_Ala_symp	PF01235.12	gi|297621537|ref|YP_003709674.1|	-	1.3e-119	399.4	24.6	1.7e-119	399.1	17.1	1.0	1	0	0	1	1	1	1	Sodium:alanine	symporter	family
DUF1516	PF07457.6	gi|297621537|ref|YP_003709674.1|	-	2.1	8.4	11.6	0.6	10.2	0.8	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1516)
Na_Ala_symp	PF01235.12	gi|297621538|ref|YP_003709675.1|	-	4.1e-128	427.5	31.7	5.3e-128	427.1	22.0	1.0	1	0	0	1	1	1	1	Sodium:alanine	symporter	family
PhaG_MnhG_YufB	PF03334.9	gi|297621539|ref|YP_003709676.1|	-	7.1e-25	86.8	10.1	8.4e-25	86.6	7.0	1.0	1	0	0	1	1	1	1	Na+/H+	antiporter	subunit
Sdh_cyt	PF01127.17	gi|297621539|ref|YP_003709676.1|	-	2.8	7.8	8.2	0.52	10.1	2.9	1.7	1	1	1	2	2	2	0	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
MrpF_PhaF	PF04066.8	gi|297621540|ref|YP_003709677.1|	-	4.9e-14	52.3	4.7	7.5e-14	51.7	3.3	1.3	1	0	0	1	1	1	1	Multiple	resistance	and	pH	regulation	protein	F	(MrpF	/	PhaF)
DUF4149	PF13664.1	gi|297621540|ref|YP_003709677.1|	-	2.1	8.4	6.7	1.2	9.2	1.5	2.0	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4149)
Cation_efflux	PF01545.16	gi|297621540|ref|YP_003709677.1|	-	2.2	7.2	7.8	0.94	8.4	2.4	1.9	1	1	1	2	2	2	0	Cation	efflux	family
MNHE	PF01899.11	gi|297621541|ref|YP_003709678.1|	-	1.7e-30	105.7	0.1	1.9e-30	105.5	0.1	1.0	1	0	0	1	1	1	1	Na+/H+	ion	antiporter	subunit
Oxidored_q1	PF00361.15	gi|297621542|ref|YP_003709679.1|	-	2.5e-52	177.7	27.0	2.5e-52	177.7	18.7	3.2	3	0	0	3	3	3	2	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1_N	PF00662.15	gi|297621542|ref|YP_003709679.1|	-	0.00022	20.7	0.6	0.00096	18.6	0.0	2.4	2	0	0	2	2	2	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Oxidored_q2	PF00420.19	gi|297621543|ref|YP_003709680.1|	-	2.2e-21	75.2	2.9	2.7e-21	74.9	2.0	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
Ost4	PF10215.4	gi|297621543|ref|YP_003709680.1|	-	0.087	12.3	1.0	0.087	12.3	0.7	2.3	2	1	0	2	2	2	0	Oligosaccaryltransferase
TauE	PF01925.14	gi|297621543|ref|YP_003709680.1|	-	0.2	11.0	12.1	0.41	10.0	8.4	1.5	1	1	0	1	1	1	0	Sulfite	exporter	TauE/SafE
Flavi_NS4A	PF01350.12	gi|297621543|ref|YP_003709680.1|	-	3.7	7.0	5.3	8.2	5.9	1.7	2.0	2	0	0	2	2	2	0	Flavivirus	non-structural	protein	NS4A
Oxidored_q3	PF00499.15	gi|297621543|ref|YP_003709680.1|	-	5.8	6.6	8.8	9.5	5.9	0.4	2.1	2	0	0	2	2	2	0	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
Oxidored_q1	PF00361.15	gi|297621544|ref|YP_003709681.1|	-	2.7e-74	249.8	15.1	2.7e-74	249.8	10.5	3.6	4	0	0	4	4	4	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
MnhB	PF04039.8	gi|297621544|ref|YP_003709681.1|	-	1.5e-20	73.4	10.7	1.5e-20	73.4	7.4	7.5	3	2	5	8	8	8	1	Domain	related	to	MnhB	subunit	of	Na+/H+	antiporter
DUF4040	PF13244.1	gi|297621544|ref|YP_003709681.1|	-	2.9e-07	30.3	11.7	2.9e-07	30.3	8.1	5.6	5	0	0	5	5	5	2	Domain	of	unknown	function	(DUF4040)
Oxidored_q1_N	PF00662.15	gi|297621544|ref|YP_003709681.1|	-	6.7e-05	22.3	0.1	6.7e-05	22.3	0.1	3.5	4	0	0	4	4	4	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Pox_I1	PF03289.8	gi|297621544|ref|YP_003709681.1|	-	0.047	12.5	0.0	0.07	11.9	0.0	1.2	1	0	0	1	1	1	0	Poxvirus	protein	I1
Glyco_hydro_20b	PF02838.10	gi|297621545|ref|YP_003709682.1|	-	0.084	13.4	0.0	0.14	12.6	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	20,	domain	2
DAHP_synth_1	PF00793.15	gi|297621546|ref|YP_003709683.1|	-	7.2e-74	247.8	0.0	8.8e-74	247.5	0.0	1.0	1	0	0	1	1	1	1	DAHP	synthetase	I	family
QueC	PF06508.8	gi|297621549|ref|YP_003709686.1|	-	1.2e-53	181.5	0.1	1.4e-53	181.3	0.1	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
NAD_synthase	PF02540.12	gi|297621549|ref|YP_003709686.1|	-	9.6e-05	21.3	0.0	0.0015	17.4	0.0	2.0	2	0	0	2	2	2	1	NAD	synthase
Arginosuc_synth	PF00764.14	gi|297621549|ref|YP_003709686.1|	-	0.0015	17.6	0.0	0.0024	16.9	0.0	1.5	1	1	0	1	1	1	1	Arginosuccinate	synthase
Asn_synthase	PF00733.16	gi|297621549|ref|YP_003709686.1|	-	0.0032	17.0	0.0	0.0053	16.2	0.0	1.3	1	0	0	1	1	1	1	Asparagine	synthase
ATP_bind_3	PF01171.15	gi|297621549|ref|YP_003709686.1|	-	0.032	13.7	0.1	0.08	12.4	0.1	1.6	2	0	0	2	2	2	0	PP-loop	family
ThiI	PF02568.9	gi|297621549|ref|YP_003709686.1|	-	0.081	12.3	0.3	3.6	6.9	0.0	2.1	2	0	0	2	2	2	0	Thiamine	biosynthesis	protein	(ThiI)
ABC_tran	PF00005.22	gi|297621550|ref|YP_003709687.1|	-	1.1e-37	129.3	0.0	2.8e-37	128.0	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter
ABC_membrane	PF00664.18	gi|297621550|ref|YP_003709687.1|	-	5.9e-33	114.4	11.5	5.9e-33	114.4	8.0	1.6	2	0	0	2	2	2	1	ABC	transporter	transmembrane	region
SMC_N	PF02463.14	gi|297621550|ref|YP_003709687.1|	-	2.1e-09	36.9	0.7	8.1e-07	28.4	0.5	2.4	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
ABC_ATPase	PF09818.4	gi|297621550|ref|YP_003709687.1|	-	7.4e-05	21.5	0.0	0.0015	17.2	0.0	2.3	2	0	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
AAA_21	PF13304.1	gi|297621550|ref|YP_003709687.1|	-	0.00018	21.5	0.0	0.73	9.7	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|297621550|ref|YP_003709687.1|	-	0.0004	19.8	0.1	0.0011	18.3	0.0	1.8	2	0	0	2	2	1	1	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|297621550|ref|YP_003709687.1|	-	0.00044	19.4	0.0	0.00095	18.3	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|297621550|ref|YP_003709687.1|	-	0.0011	19.0	0.1	0.0034	17.3	0.0	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_23	PF13476.1	gi|297621550|ref|YP_003709687.1|	-	0.0011	19.3	2.3	0.0064	16.8	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|297621550|ref|YP_003709687.1|	-	0.0012	19.6	0.1	0.023	15.5	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|297621550|ref|YP_003709687.1|	-	0.0029	17.7	0.1	0.033	14.3	0.1	2.4	1	1	0	1	1	1	1	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|297621550|ref|YP_003709687.1|	-	0.0056	16.1	0.0	0.013	15.0	0.0	1.5	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_30	PF13604.1	gi|297621550|ref|YP_003709687.1|	-	0.01	15.3	0.0	0.032	13.8	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
DUF87	PF01935.12	gi|297621550|ref|YP_003709687.1|	-	0.028	14.2	0.0	0.12	12.2	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
Mg_chelatase	PF01078.16	gi|297621550|ref|YP_003709687.1|	-	0.031	13.4	0.0	0.062	12.4	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
ATP_synt_I	PF03899.10	gi|297621550|ref|YP_003709687.1|	-	0.037	14.1	0.5	0.037	14.1	0.4	2.8	4	0	0	4	4	3	0	ATP	synthase	I	chain
AAA_19	PF13245.1	gi|297621550|ref|YP_003709687.1|	-	0.045	13.4	0.1	0.17	11.6	0.0	2.0	2	0	0	2	2	2	0	Part	of	AAA	domain
PHP	PF02811.14	gi|297621550|ref|YP_003709687.1|	-	0.052	13.3	0.0	0.13	11.9	0.0	1.6	1	0	0	1	1	1	0	PHP	domain
AAA_14	PF13173.1	gi|297621550|ref|YP_003709687.1|	-	0.056	13.3	0.0	0.23	11.3	0.0	2.1	1	1	1	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|297621550|ref|YP_003709687.1|	-	0.058	13.3	0.0	0.17	11.8	0.0	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
DEAD	PF00270.24	gi|297621550|ref|YP_003709687.1|	-	0.067	12.6	0.0	0.26	10.7	0.0	1.9	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
ATP-synt_ab	PF00006.20	gi|297621550|ref|YP_003709687.1|	-	0.072	12.5	0.3	0.4	10.1	0.0	2.1	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_25	PF13481.1	gi|297621550|ref|YP_003709687.1|	-	0.14	11.5	0.0	0.43	9.9	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
DUF2847	PF11009.3	gi|297621551|ref|YP_003709688.1|	-	1.1e-32	111.7	0.1	1.2e-32	111.5	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2847)
ACCA	PF03255.9	gi|297621552|ref|YP_003709689.1|	-	2.3e-55	186.1	0.0	3.4e-55	185.5	0.0	1.2	1	0	0	1	1	1	1	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
Carboxyl_trans	PF01039.17	gi|297621552|ref|YP_003709689.1|	-	7.3e-18	64.1	0.0	9.5e-18	63.8	0.0	1.1	1	0	0	1	1	1	1	Carboxyl	transferase	domain
PEX11	PF05648.9	gi|297621552|ref|YP_003709689.1|	-	0.054	12.7	0.3	0.2	10.8	0.0	2.0	2	0	0	2	2	2	0	Peroxisomal	biogenesis	factor	11	(PEX11)
YkuD	PF03734.9	gi|297621553|ref|YP_003709690.1|	-	8.3e-10	39.0	0.0	1.7e-09	38.0	0.0	1.5	1	1	0	1	1	1	1	L,D-transpeptidase	catalytic	domain
Bac_DNA_binding	PF00216.16	gi|297621554|ref|YP_003709691.1|	-	2.5e-25	88.2	0.1	2.9e-25	88.1	0.1	1.0	1	0	0	1	1	1	1	Bacterial	DNA-binding	protein
HU-DNA_bdg	PF14848.1	gi|297621554|ref|YP_003709691.1|	-	0.00022	20.9	0.0	0.035	13.8	0.0	2.1	2	0	0	2	2	2	2	DNA-binding	domain
DUF4496	PF14908.1	gi|297621554|ref|YP_003709691.1|	-	0.062	13.1	0.0	0.068	13.0	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4496)
tRNA-synt_1b	PF00579.20	gi|297621555|ref|YP_003709692.1|	-	5.4e-80	268.6	0.0	7.6e-80	268.1	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
S4	PF01479.20	gi|297621555|ref|YP_003709692.1|	-	2.3e-06	26.9	0.0	5.7e-06	25.6	0.0	1.7	1	0	0	1	1	1	1	S4	domain
ATE_C	PF04377.10	gi|297621555|ref|YP_003709692.1|	-	0.076	13.0	0.1	0.43	10.6	0.0	2.1	2	0	0	2	2	2	0	Arginine-tRNA-protein	transferase,	C	terminus
TcdB_N	PF12918.2	gi|297621556|ref|YP_003709693.1|	-	0.067	13.2	0.4	0.13	12.3	0.3	1.5	1	0	0	1	1	1	0	TcdB	toxin	N-terminal	helical	domain
Chlamy_scaf	PF09675.5	gi|297621556|ref|YP_003709693.1|	-	0.069	13.1	0.2	0.12	12.3	0.0	1.5	2	0	0	2	2	2	0	Chlamydia-phage	Chp2	scaffold	(Chlamy_scaf)
DUF2813	PF11398.3	gi|297621556|ref|YP_003709693.1|	-	0.084	11.9	1.9	0.1	11.6	1.3	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2813)
DUF2361	PF10153.4	gi|297621556|ref|YP_003709693.1|	-	0.17	12.0	7.2	0.23	11.6	5.0	1.2	1	0	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2361)
OmpH	PF03938.9	gi|297621556|ref|YP_003709693.1|	-	0.66	9.8	4.7	0.24	11.3	1.7	1.4	2	0	0	2	2	2	0	Outer	membrane	protein	(OmpH-like)
TPX2	PF06886.6	gi|297621556|ref|YP_003709693.1|	-	0.94	9.5	7.7	0.2	11.7	2.7	1.8	2	0	0	2	2	2	0	Targeting	protein	for	Xklp2	(TPX2)
NIF3	PF01784.13	gi|297621557|ref|YP_003709694.1|	-	9.9e-47	159.5	0.0	1.2e-46	159.2	0.0	1.0	1	0	0	1	1	1	1	NIF3	(NGG1p	interacting	factor	3)
Rib_5-P_isom_A	PF06026.9	gi|297621558|ref|YP_003709695.1|	-	2e-58	196.5	0.1	2.5e-58	196.2	0.0	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
DeoRC	PF00455.17	gi|297621558|ref|YP_003709695.1|	-	1.4e-06	28.0	0.6	6.7e-06	25.8	0.1	2.0	2	0	0	2	2	2	1	DeoR	C	terminal	sensor	domain
Sugar-bind	PF04198.8	gi|297621558|ref|YP_003709695.1|	-	0.0043	15.9	0.1	0.0076	15.1	0.0	1.4	1	1	0	1	1	1	1	Putative	sugar-binding	domain
FluMu_gp41	PF10109.4	gi|297621558|ref|YP_003709695.1|	-	0.064	13.1	0.0	0.15	12.0	0.0	1.6	1	0	0	1	1	1	0	Mu-like	prophage	FluMu	protein	gp41
DNase-RNase	PF02577.9	gi|297621559|ref|YP_003709696.1|	-	5e-33	113.1	0.1	5.6e-33	113.0	0.0	1.0	1	0	0	1	1	1	1	Bifunctional	nuclease
PTS-HPr	PF00381.14	gi|297621560|ref|YP_003709697.1|	-	7e-27	93.1	0.5	8e-27	92.9	0.4	1.1	1	0	0	1	1	1	1	PTS	HPr	component	phosphorylation	site
Peptidase_M3	PF01432.15	gi|297621562|ref|YP_003709699.1|	-	4.8e-76	256.6	4.9	7e-76	256.1	3.4	1.2	1	0	0	1	1	1	1	Peptidase	family	M3
Peptidase_M3_N	PF08439.5	gi|297621562|ref|YP_003709699.1|	-	9.4e-14	51.2	0.5	3.1e-13	49.5	0.3	2.0	1	0	0	1	1	1	1	Oligopeptidase	F
Cpn10	PF00166.16	gi|297621563|ref|YP_003709700.1|	-	1.3e-30	105.1	0.2	1.5e-30	104.9	0.1	1.0	1	0	0	1	1	1	1	Chaperonin	10	Kd	subunit
PhyH	PF05721.8	gi|297621563|ref|YP_003709700.1|	-	0.099	12.6	0.0	0.11	12.4	0.0	1.2	1	0	0	1	1	1	0	Phytanoyl-CoA	dioxygenase	(PhyH)
Cpn60_TCP1	PF00118.19	gi|297621564|ref|YP_003709701.1|	-	1e-123	413.5	13.9	1.2e-123	413.3	9.6	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
PBP5_C	PF07943.8	gi|297621564|ref|YP_003709701.1|	-	0.13	12.2	4.7	3	7.9	0.1	3.2	3	0	0	3	3	3	0	Penicillin-binding	protein	5,	C-terminal	domain
Peptidase_C14	PF00656.17	gi|297621565|ref|YP_003709702.1|	-	0.00015	21.5	0.0	0.00032	20.4	0.0	1.6	1	1	0	1	1	1	1	Caspase	domain
DUF3763	PF12592.3	gi|297621566|ref|YP_003709703.1|	-	0.021	14.4	0.1	0.049	13.2	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3763)
TPR_12	PF13424.1	gi|297621567|ref|YP_003709704.1|	-	0.00098	19.0	0.8	0.0014	18.5	0.5	1.3	1	0	0	1	1	1	1	Tetratricopeptide	repeat
HTH_31	PF13560.1	gi|297621567|ref|YP_003709704.1|	-	0.0047	17.1	0.0	0.0077	16.4	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
TPR_14	PF13428.1	gi|297621567|ref|YP_003709704.1|	-	0.026	15.1	0.9	0.058	14.0	0.3	1.8	1	1	1	2	2	2	0	Tetratricopeptide	repeat
HTH_26	PF13443.1	gi|297621567|ref|YP_003709704.1|	-	0.079	13.1	0.0	0.12	12.6	0.0	1.2	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
Gp49	PF05973.9	gi|297621568|ref|YP_003709705.1|	-	4.3e-19	68.3	0.1	5.3e-19	68.0	0.1	1.1	1	0	0	1	1	1	1	Phage	derived	protein	Gp49-like	(DUF891)
Histidinol_dh	PF00815.15	gi|297621570|ref|YP_003709707.1|	-	9.2e-06	24.5	0.2	1.4e-05	23.9	0.1	1.2	1	0	0	1	1	1	1	Histidinol	dehydrogenase
BatD	PF13584.1	gi|297621571|ref|YP_003709708.1|	-	3.9e-08	32.3	0.4	4.2e-08	32.2	0.3	1.0	1	0	0	1	1	1	1	Oxygen	tolerance
TRAPPC10	PF12584.3	gi|297621571|ref|YP_003709708.1|	-	0.003	17.0	0.1	0.0037	16.7	0.1	1.3	1	1	0	1	1	1	1	Trafficking	protein	particle	complex	subunit	10,	TRAPPC10
SoxZ	PF08770.6	gi|297621571|ref|YP_003709708.1|	-	0.05	13.0	0.1	0.077	12.4	0.1	1.3	1	0	0	1	1	1	0	Sulphur	oxidation	protein	SoxZ
Pyridoxal_deC	PF00282.14	gi|297621571|ref|YP_003709708.1|	-	0.1	11.0	0.0	0.11	10.9	0.0	1.1	1	0	0	1	1	1	0	Pyridoxal-dependent	decarboxylase	conserved	domain
HIT	PF01230.18	gi|297621572|ref|YP_003709709.1|	-	3.5e-14	53.1	0.7	1.2e-13	51.3	0.1	2.0	2	0	0	2	2	2	1	HIT	domain
DcpS_C	PF11969.3	gi|297621572|ref|YP_003709709.1|	-	5.1e-06	26.6	2.5	0.00024	21.3	0.4	2.5	2	1	0	2	2	2	2	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.10	gi|297621572|ref|YP_003709709.1|	-	0.062	12.9	0.1	0.14	11.7	0.0	1.7	1	0	0	1	1	1	0	Protein	similar	to	CwfJ	C-terminus	1
MutS_V	PF00488.16	gi|297621573|ref|YP_003709710.1|	-	1.1e-102	342.4	0.0	2.3e-102	341.4	0.0	1.5	1	0	0	1	1	1	1	MutS	domain	V
MutS_III	PF05192.13	gi|297621573|ref|YP_003709710.1|	-	5.3e-43	147.1	3.7	8.5e-43	146.5	2.6	1.3	1	0	0	1	1	1	1	MutS	domain	III
MutS_I	PF01624.15	gi|297621573|ref|YP_003709710.1|	-	3.9e-40	136.3	0.2	1.7e-39	134.3	0.0	2.2	2	0	0	2	2	2	1	MutS	domain	I
MutS_IV	PF05190.13	gi|297621573|ref|YP_003709710.1|	-	9.4e-30	102.6	1.6	2.3e-29	101.4	1.1	1.7	1	0	0	1	1	1	1	MutS	family	domain	IV
MutS_II	PF05188.12	gi|297621573|ref|YP_003709710.1|	-	1.7e-21	76.6	0.0	4.9e-21	75.2	0.0	1.7	1	0	0	1	1	1	1	MutS	domain	II
Rad17	PF03215.10	gi|297621573|ref|YP_003709710.1|	-	0.0081	14.8	0.0	0.15	10.6	0.0	2.1	2	0	0	2	2	2	1	Rad17	cell	cycle	checkpoint	protein
AAA_14	PF13173.1	gi|297621573|ref|YP_003709710.1|	-	0.0095	15.8	0.0	0.046	13.6	0.0	2.3	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|297621573|ref|YP_003709710.1|	-	0.042	13.3	0.0	0.096	12.2	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|297621573|ref|YP_003709710.1|	-	0.17	12.2	10.3	0.87	9.8	0.0	3.1	3	1	0	3	3	3	0	AAA	domain
CxxCxxCC	PF03692.10	gi|297621575|ref|YP_003709712.1|	-	3.3e-05	24.2	0.1	6.4e-05	23.3	0.0	1.4	1	1	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
Defensin_beta	PF00711.14	gi|297621575|ref|YP_003709712.1|	-	3.2	7.7	7.9	2.4	8.1	1.9	2.3	2	0	0	2	2	2	0	Beta	defensin
Sec23_helical	PF04815.10	gi|297621577|ref|YP_003709714.1|	-	0.14	11.5	0.0	0.26	10.7	0.0	1.4	1	0	0	1	1	1	0	Sec23/Sec24	helical	domain
DEAD	PF00270.24	gi|297621578|ref|YP_003709715.1|	-	4.1e-18	65.4	0.1	1.5e-17	63.6	0.0	1.9	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|297621578|ref|YP_003709715.1|	-	1.9e-15	57.1	0.1	3.5e-14	53.0	0.1	2.3	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|297621578|ref|YP_003709715.1|	-	2e-10	40.3	0.0	6.1e-09	35.6	0.0	2.8	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
Zot	PF05707.7	gi|297621578|ref|YP_003709715.1|	-	9.2e-06	25.2	0.0	1.9e-05	24.2	0.0	1.5	1	0	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
Arch_ATPase	PF01637.13	gi|297621578|ref|YP_003709715.1|	-	7.4e-05	22.5	0.1	0.00014	21.6	0.1	1.4	1	0	0	1	1	1	1	Archaeal	ATPase
PIF1	PF05970.9	gi|297621578|ref|YP_003709715.1|	-	0.0011	17.9	0.0	0.002	17.1	0.0	1.3	1	0	0	1	1	1	1	PIF1-like	helicase
AAA_19	PF13245.1	gi|297621578|ref|YP_003709715.1|	-	0.005	16.5	0.0	0.013	15.2	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
DAP3	PF10236.4	gi|297621578|ref|YP_003709715.1|	-	0.01	14.7	0.0	0.018	13.9	0.0	1.3	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
Helicase_C_2	PF13307.1	gi|297621578|ref|YP_003709715.1|	-	0.013	15.4	0.0	5.4	6.9	0.0	2.7	2	0	0	2	2	2	0	Helicase	C-terminal	domain
AAA_30	PF13604.1	gi|297621578|ref|YP_003709715.1|	-	0.015	14.9	0.0	0.026	14.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Kinesin	PF00225.18	gi|297621578|ref|YP_003709715.1|	-	0.021	13.5	0.0	0.034	12.8	0.0	1.2	1	0	0	1	1	1	0	Kinesin	motor	domain
AAA_16	PF13191.1	gi|297621578|ref|YP_003709715.1|	-	0.038	13.9	0.0	0.076	12.9	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_22	PF13401.1	gi|297621578|ref|YP_003709715.1|	-	0.042	13.9	0.0	0.21	11.7	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|297621578|ref|YP_003709715.1|	-	0.14	10.7	0.0	0.25	9.9	0.0	1.3	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
tRNA-synt_2	PF00152.15	gi|297621580|ref|YP_003709717.1|	-	9.6e-92	307.3	0.3	1.2e-91	306.9	0.2	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|297621580|ref|YP_003709717.1|	-	3.5e-15	55.6	0.0	7.2e-15	54.6	0.0	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|297621580|ref|YP_003709717.1|	-	7e-09	35.2	0.1	7.3e-06	25.3	0.0	2.5	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2b	PF00587.20	gi|297621580|ref|YP_003709717.1|	-	0.0014	18.2	0.1	1.6	8.2	0.0	2.4	2	0	0	2	2	2	2	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
OGFr_N	PF04664.8	gi|297621581|ref|YP_003709718.1|	-	0.00011	21.6	0.9	0.00015	21.1	0.6	1.3	1	0	0	1	1	1	1	Opioid	growth	factor	receptor	(OGFr)	conserved	region
DUF4124	PF13511.1	gi|297621581|ref|YP_003709718.1|	-	0.063	13.3	0.0	0.11	12.5	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4124)
RE_R_Pab1	PF09522.5	gi|297621583|ref|YP_003709720.1|	-	0.034	14.0	0.1	0.056	13.3	0.1	1.4	1	0	0	1	1	1	0	R.Pab1	restriction	endonuclease
RHS_repeat	PF05593.9	gi|297621584|ref|YP_003709721.1|	-	1e-39	133.9	68.3	0.00011	22.2	0.0	19.0	15	4	4	20	20	20	14	RHS	Repeat
DUF3089	PF11288.3	gi|297621584|ref|YP_003709721.1|	-	0.048	12.8	0.0	0.094	11.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3089)
Cutinase	PF01083.17	gi|297621584|ref|YP_003709721.1|	-	0.056	13.1	0.0	0.14	11.8	0.0	1.6	1	0	0	1	1	1	0	Cutinase
OPT	PF03169.10	gi|297621587|ref|YP_003709724.1|	-	1e-39	136.5	49.5	5.6e-24	84.5	16.3	2.2	2	0	0	2	2	2	2	OPT	oligopeptide	transporter	protein
Fer4_6	PF12837.2	gi|297621588|ref|YP_003709725.1|	-	3.4e-08	33.0	16.4	0.00019	21.1	3.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|297621588|ref|YP_003709725.1|	-	4.6e-08	32.7	6.9	0.00032	20.4	0.6	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|297621588|ref|YP_003709725.1|	-	9.8e-08	32.1	9.9	1.6e-07	31.5	6.6	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|297621588|ref|YP_003709725.1|	-	1.1e-07	32.0	10.6	2.3e-07	31.0	7.4	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297621588|ref|YP_003709725.1|	-	1.2e-07	31.2	13.4	3.1e-05	23.6	1.5	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|297621588|ref|YP_003709725.1|	-	3.7e-07	29.4	14.5	4.4e-06	26.0	2.4	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|297621588|ref|YP_003709725.1|	-	1.6e-06	27.8	4.7	0.00031	20.5	0.4	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|297621588|ref|YP_003709725.1|	-	3.8e-06	27.5	4.0	0.0016	19.1	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_18	PF13746.1	gi|297621588|ref|YP_003709725.1|	-	1.3e-05	25.5	4.4	0.00058	20.2	0.3	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|297621588|ref|YP_003709725.1|	-	1.3e-05	25.3	2.4	0.004	17.4	0.0	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|297621588|ref|YP_003709725.1|	-	0.00012	22.1	14.6	0.0021	18.2	2.1	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|297621588|ref|YP_003709725.1|	-	0.00046	20.1	2.4	0.00046	20.1	1.7	2.2	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|297621588|ref|YP_003709725.1|	-	0.00086	19.1	2.6	0.064	13.1	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|297621588|ref|YP_003709725.1|	-	0.0083	15.7	10.6	0.11	12.1	1.0	2.2	1	1	1	2	2	2	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_3	PF12798.2	gi|297621588|ref|YP_003709725.1|	-	0.019	15.4	26.2	0.077	13.6	5.8	2.6	3	0	0	3	3	2	0	4Fe-4S	binding	domain
tRNA-synt_1e	PF01406.14	gi|297621589|ref|YP_003709726.1|	-	1.3e-110	369.2	0.1	1.7e-110	368.8	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|297621589|ref|YP_003709726.1|	-	8.1e-12	44.4	0.9	4.5e-06	25.5	0.0	2.1	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
DALR_2	PF09190.6	gi|297621589|ref|YP_003709726.1|	-	5.7e-08	32.8	0.2	1.3e-07	31.7	0.1	1.6	1	0	0	1	1	1	1	DALR	domain
tRNA-synt_1f	PF01921.13	gi|297621589|ref|YP_003709726.1|	-	1.8e-06	26.9	0.2	0.0016	17.2	0.0	2.6	2	1	1	3	3	3	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1c	PF00749.16	gi|297621589|ref|YP_003709726.1|	-	0.00046	18.9	0.0	0.0012	17.5	0.0	1.7	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1	PF00133.17	gi|297621589|ref|YP_003709726.1|	-	0.00077	17.5	0.0	0.0071	14.4	0.0	2.2	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Band_7	PF01145.20	gi|297621589|ref|YP_003709726.1|	-	0.015	15.1	0.1	0.34	10.8	0.0	2.2	2	0	0	2	2	2	0	SPFH	domain	/	Band	7	family
tRNA-synt_1d	PF00750.14	gi|297621589|ref|YP_003709726.1|	-	0.017	13.9	0.0	1.4	7.6	0.0	2.2	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(R)
AMP-binding	PF00501.23	gi|297621590|ref|YP_003709727.1|	-	2.6e-68	230.3	0.0	3.5e-68	229.9	0.0	1.2	1	0	0	1	1	1	1	AMP-binding	enzyme
Acyltransferase	PF01553.16	gi|297621590|ref|YP_003709727.1|	-	1.4e-07	30.9	0.0	1.3e-06	27.8	0.0	2.1	2	0	0	2	2	2	1	Acyltransferase
PP-binding	PF00550.20	gi|297621590|ref|YP_003709727.1|	-	2.3e-05	24.5	0.3	5.8e-05	23.2	0.2	1.6	1	0	0	1	1	1	1	Phosphopantetheine	attachment	site
NUDIX	PF00293.23	gi|297621593|ref|YP_003709730.1|	-	1.1e-19	70.4	0.2	1.3e-19	70.2	0.1	1.0	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.1	gi|297621593|ref|YP_003709730.1|	-	0.037	13.4	0.1	0.15	11.5	0.0	1.8	1	1	0	1	1	1	0	NUDIX	domain
ketoacyl-synt	PF00109.21	gi|297621594|ref|YP_003709731.1|	-	2.1e-57	194.4	2.2	3.6e-57	193.7	0.5	1.9	2	0	0	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
Ketoacyl-synt_C	PF02801.17	gi|297621594|ref|YP_003709731.1|	-	4.3e-33	113.6	1.8	4.3e-33	113.6	1.2	1.6	2	0	0	2	2	2	1	Beta-ketoacyl	synthase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|297621594|ref|YP_003709731.1|	-	6.4e-07	28.6	0.0	1.5e-06	27.4	0.0	1.6	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|297621594|ref|YP_003709731.1|	-	0.053	13.1	0.9	14	5.4	0.4	2.7	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Oligomerisation	PF02410.10	gi|297621595|ref|YP_003709732.1|	-	4.5e-30	103.6	0.1	5.3e-30	103.4	0.1	1.1	1	0	0	1	1	1	1	Oligomerisation	domain
CTP_transf_2	PF01467.21	gi|297621596|ref|YP_003709733.1|	-	3.9e-24	85.4	0.0	5.8e-24	84.9	0.0	1.3	1	0	0	1	1	1	1	Cytidylyltransferase
GSIII_N	PF12437.3	gi|297621597|ref|YP_003709734.1|	-	2.7e-70	235.0	0.0	3.8e-69	231.3	0.0	2.2	2	0	0	2	2	2	1	Glutamine	synthetase	type	III	N	terminal
Gln-synt_C	PF00120.19	gi|297621597|ref|YP_003709734.1|	-	1.5e-38	132.4	0.0	3.3e-38	131.3	0.0	1.6	1	1	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
HbrB	PF08539.6	gi|297621597|ref|YP_003709734.1|	-	0.094	12.5	0.6	0.22	11.3	0.4	1.6	1	0	0	1	1	1	0	HbrB-like
HAD	PF12710.2	gi|297621598|ref|YP_003709735.1|	-	1.4e-10	41.6	0.0	1.5e-10	41.5	0.0	1.1	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|297621598|ref|YP_003709735.1|	-	0.0064	16.9	0.0	0.0081	16.5	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|297621598|ref|YP_003709735.1|	-	0.021	14.4	0.0	0.93	9.0	0.0	2.1	2	0	0	2	2	2	0	haloacid	dehalogenase-like	hydrolase
DJ-1_PfpI	PF01965.19	gi|297621598|ref|YP_003709735.1|	-	0.076	12.4	0.0	0.1	12.0	0.0	1.2	1	0	0	1	1	1	0	DJ-1/PfpI	family
CmcI	PF04989.7	gi|297621598|ref|YP_003709735.1|	-	0.076	12.3	0.0	0.11	11.8	0.0	1.2	1	0	0	1	1	1	0	Cephalosporin	hydroxylase
NPV_P10	PF05531.7	gi|297621599|ref|YP_003709736.1|	-	3.2	8.0	17.7	29	4.9	0.0	5.9	5	2	2	7	7	6	0	Nucleopolyhedrovirus	P10	protein
Hpt	PF01627.18	gi|297621599|ref|YP_003709736.1|	-	5.3	7.1	9.1	25	4.9	0.7	4.3	4	0	0	4	4	4	0	Hpt	domain
IPPT	PF01715.12	gi|297621600|ref|YP_003709737.1|	-	6.1e-77	258.0	0.0	8.1e-77	257.6	0.0	1.1	1	0	0	1	1	1	1	IPP	transferase
IPT	PF01745.11	gi|297621600|ref|YP_003709737.1|	-	2.6e-10	39.8	0.1	1.4e-07	30.9	0.0	2.2	2	0	0	2	2	2	2	Isopentenyl	transferase
AAA_17	PF13207.1	gi|297621600|ref|YP_003709737.1|	-	7.9e-07	29.9	0.0	1.9e-06	28.6	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
PPV_E1_C	PF00519.12	gi|297621600|ref|YP_003709737.1|	-	3.1e-05	22.7	0.0	5e-05	22.1	0.0	1.2	1	0	0	1	1	1	1	Papillomavirus	helicase
AAA_33	PF13671.1	gi|297621600|ref|YP_003709737.1|	-	3.3e-05	23.7	0.0	0.00042	20.1	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|297621600|ref|YP_003709737.1|	-	0.00017	21.9	0.0	0.014	15.6	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|297621600|ref|YP_003709737.1|	-	0.0012	17.9	0.8	0.011	14.8	0.0	2.6	2	1	0	2	2	2	1	Zeta	toxin
UPF0079	PF02367.12	gi|297621600|ref|YP_003709737.1|	-	0.0048	16.5	0.0	0.0089	15.6	0.0	1.4	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_14	PF13173.1	gi|297621600|ref|YP_003709737.1|	-	0.011	15.6	0.0	0.022	14.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|297621600|ref|YP_003709737.1|	-	0.014	15.6	0.0	0.046	13.9	0.0	1.9	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.17	gi|297621600|ref|YP_003709737.1|	-	0.017	15.3	0.0	0.036	14.2	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
PRK	PF00485.13	gi|297621600|ref|YP_003709737.1|	-	0.022	14.3	0.0	0.043	13.3	0.0	1.5	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
IstB_IS21	PF01695.12	gi|297621600|ref|YP_003709737.1|	-	0.036	13.4	0.0	0.098	12.0	0.0	1.8	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_25	PF13481.1	gi|297621600|ref|YP_003709737.1|	-	0.062	12.6	0.0	0.12	11.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|297621600|ref|YP_003709737.1|	-	0.087	12.9	0.0	0.23	11.5	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|297621600|ref|YP_003709737.1|	-	0.091	11.6	0.0	0.16	10.8	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
PhoH	PF02562.11	gi|297621600|ref|YP_003709737.1|	-	0.13	11.4	0.1	0.31	10.2	0.0	1.7	2	0	0	2	2	2	0	PhoH-like	protein
DHH	PF01368.15	gi|297621601|ref|YP_003709738.1|	-	1e-15	57.6	0.1	2.5e-15	56.3	0.0	1.6	2	0	0	2	2	2	1	DHH	family
DHHA1	PF02272.14	gi|297621601|ref|YP_003709738.1|	-	2e-08	33.7	0.0	4.5e-08	32.6	0.0	1.6	1	0	0	1	1	1	1	DHHA1	domain
DUF4392	PF14336.1	gi|297621601|ref|YP_003709738.1|	-	0.056	12.2	0.0	0.19	10.5	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4392)
SSB	PF00436.20	gi|297621602|ref|YP_003709739.1|	-	4.2e-31	106.8	0.0	5.2e-31	106.6	0.0	1.1	1	0	0	1	1	1	1	Single-strand	binding	protein	family
CutA1	PF03091.10	gi|297621603|ref|YP_003709740.1|	-	8.7e-30	102.3	1.6	9.7e-30	102.2	1.1	1.0	1	0	0	1	1	1	1	CutA1	divalent	ion	tolerance	protein
POTRA_1	PF08478.5	gi|297621604|ref|YP_003709741.1|	-	5.5e-05	23.1	0.0	0.00016	21.6	0.0	1.8	2	0	0	2	2	2	1	POTRA	domain,	FtsQ-type
Mur_ligase_C	PF02875.16	gi|297621605|ref|YP_003709742.1|	-	5.5e-24	84.0	0.0	1.4e-23	82.7	0.0	1.7	1	0	0	1	1	1	1	Mur	ligase	family,	glutamate	ligase	domain
Mur_ligase_M	PF08245.7	gi|297621605|ref|YP_003709742.1|	-	2.1e-19	70.3	0.0	3.3e-19	69.6	0.0	1.3	1	0	0	1	1	1	1	Mur	ligase	middle	domain
Mur_ligase	PF01225.20	gi|297621605|ref|YP_003709742.1|	-	4.2e-15	55.5	0.0	8.9e-15	54.5	0.0	1.6	1	0	0	1	1	1	1	Mur	ligase	family,	catalytic	domain
YajC	PF02699.10	gi|297621605|ref|YP_003709742.1|	-	0.15	11.7	0.1	12	5.6	0.0	2.4	2	0	0	2	2	2	0	Preprotein	translocase	subunit
Ifi-6-16	PF06140.8	gi|297621605|ref|YP_003709742.1|	-	2.7	7.8	6.6	6	6.7	0.7	2.3	2	0	0	2	2	2	0	Interferon-induced	6-16	family
Glyco_tran_28_C	PF04101.11	gi|297621606|ref|YP_003709743.1|	-	1.7e-31	109.1	0.0	2.4e-31	108.6	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
Glyco_transf_28	PF03033.15	gi|297621606|ref|YP_003709743.1|	-	2.2e-21	76.0	0.0	5.5e-21	74.7	0.0	1.6	1	0	0	1	1	1	1	Glycosyltransferase	family	28	N-terminal	domain
Glyco_trans_1_3	PF13528.1	gi|297621606|ref|YP_003709743.1|	-	3.6e-08	32.9	0.0	3.3e-07	29.8	0.0	2.0	1	1	0	1	1	1	1	Glycosyl	transferase	family	1
Glyco_trans_4_4	PF13579.1	gi|297621606|ref|YP_003709743.1|	-	0.037	14.1	0.0	0.29	11.2	0.0	2.1	2	0	0	2	2	2	0	Glycosyl	transferase	4-like	domain
Alg14	PF08660.6	gi|297621606|ref|YP_003709743.1|	-	0.042	13.8	0.0	0.11	12.4	0.0	1.7	1	1	0	1	1	1	0	Oligosaccharide	biosynthesis	protein	Alg14	like
FTSW_RODA_SPOVE	PF01098.14	gi|297621607|ref|YP_003709744.1|	-	6.3e-80	268.6	20.3	7.6e-80	268.3	14.1	1.0	1	0	0	1	1	1	1	Cell	cycle	protein
LysM	PF01476.15	gi|297621608|ref|YP_003709745.1|	-	4.8e-26	90.3	0.0	4.4e-14	52.0	0.1	2.3	2	0	0	2	2	2	2	LysM	domain
DUF3071	PF11268.3	gi|297621608|ref|YP_003709745.1|	-	0.1	12.3	0.1	0.28	10.8	0.0	1.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3071)
Mur_ligase_M	PF08245.7	gi|297621609|ref|YP_003709746.1|	-	4.5e-30	105.0	0.0	7.2e-30	104.4	0.0	1.3	1	0	0	1	1	1	1	Mur	ligase	middle	domain
Mur_ligase_C	PF02875.16	gi|297621609|ref|YP_003709746.1|	-	5.9e-06	26.2	0.0	2.4e-05	24.2	0.0	2.1	1	0	0	1	1	1	1	Mur	ligase	family,	glutamate	ligase	domain
DAO	PF01266.19	gi|297621609|ref|YP_003709746.1|	-	9.3e-05	21.4	0.0	0.00019	20.4	0.0	1.5	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|297621609|ref|YP_003709746.1|	-	0.0016	17.5	0.1	0.0028	16.7	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|297621609|ref|YP_003709746.1|	-	0.0019	18.2	0.2	0.0079	16.2	0.1	2.1	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.9	gi|297621609|ref|YP_003709746.1|	-	0.0023	17.8	0.2	0.048	13.5	0.1	2.7	1	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|297621609|ref|YP_003709746.1|	-	0.0025	17.4	0.0	0.0056	16.3	0.0	1.6	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|297621609|ref|YP_003709746.1|	-	0.0033	17.0	0.1	0.0067	16.0	0.0	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
TrkA_N	PF02254.13	gi|297621609|ref|YP_003709746.1|	-	0.0075	16.2	0.0	0.056	13.4	0.0	2.4	2	0	0	2	2	2	1	TrkA-N	domain
UDPG_MGDP_dh_N	PF03721.9	gi|297621609|ref|YP_003709746.1|	-	0.013	14.8	0.0	0.1	11.9	0.0	2.2	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
FAD_binding_2	PF00890.19	gi|297621609|ref|YP_003709746.1|	-	0.02	13.7	0.1	0.032	13.0	0.1	1.3	1	0	0	1	1	1	0	FAD	binding	domain
NAD_binding_2	PF03446.10	gi|297621609|ref|YP_003709746.1|	-	0.031	14.1	0.1	0.24	11.2	0.0	2.4	2	1	1	3	3	3	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
GIDA	PF01134.17	gi|297621609|ref|YP_003709746.1|	-	0.055	12.3	0.4	0.18	10.6	0.3	2.0	1	1	0	1	1	1	0	Glucose	inhibited	division	protein	A
Mur_ligase	PF01225.20	gi|297621609|ref|YP_003709746.1|	-	0.064	13.3	0.0	0.13	12.3	0.0	1.4	1	0	0	1	1	1	0	Mur	ligase	family,	catalytic	domain
Pyr_redox	PF00070.22	gi|297621609|ref|YP_003709746.1|	-	0.072	13.5	0.0	0.26	11.7	0.0	2.0	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_10	PF13460.1	gi|297621609|ref|YP_003709746.1|	-	0.2	11.6	0.9	0.47	10.4	0.1	2.0	2	1	0	2	2	2	0	NADH(P)-binding
Glycos_transf_4	PF00953.16	gi|297621610|ref|YP_003709747.1|	-	6e-37	126.9	8.8	6e-37	126.9	6.1	2.2	3	1	0	3	3	3	1	Glycosyl	transferase	family	4
MraY_sig1	PF10555.4	gi|297621610|ref|YP_003709747.1|	-	0.00091	18.3	0.2	0.00091	18.3	0.1	2.1	2	0	0	2	2	2	1	Phospho-N-acetylmuramoyl-pentapeptide-transferase	signature	1
FA_desaturase	PF00487.19	gi|297621611|ref|YP_003709748.1|	-	9.2e-14	51.4	21.0	9.2e-14	51.4	14.5	1.7	1	1	0	1	1	1	1	Fatty	acid	desaturase
Choline_kin_N	PF04428.9	gi|297621611|ref|YP_003709748.1|	-	0.24	10.9	1.5	0.46	9.9	0.7	1.7	2	0	0	2	2	2	0	Choline	kinase	N	terminus
ALMT	PF11744.3	gi|297621611|ref|YP_003709748.1|	-	0.29	9.7	1.7	0.54	8.8	1.2	1.4	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
TP_methylase	PF00590.15	gi|297621612|ref|YP_003709749.1|	-	5.6e-32	111.1	0.0	6.8e-32	110.8	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
PMT_C	PF11647.3	gi|297621612|ref|YP_003709749.1|	-	0.022	14.3	0.1	0.22	11.1	0.0	2.4	2	0	0	2	2	2	0	C-terminal	region	of	Pasteurella	multocida	toxin	residues	569-1285
Toluene_X	PF03349.11	gi|297621613|ref|YP_003709750.1|	-	6.6e-17	60.9	0.0	9e-16	57.2	0.0	2.0	1	1	0	1	1	1	1	Outer	membrane	protein	transport	protein	(OMPP1/FadL/TodX)
QRPTase_C	PF01729.14	gi|297621614|ref|YP_003709751.1|	-	5.3e-49	165.9	0.0	6.7e-49	165.6	0.0	1.1	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|297621614|ref|YP_003709751.1|	-	1.8e-22	78.9	0.0	2.8e-22	78.3	0.0	1.3	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Cpn60_TCP1	PF00118.19	gi|297621615|ref|YP_003709752.1|	-	1.2e-114	383.6	17.3	1.3e-114	383.4	12.0	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
CaMKII_AD	PF08332.5	gi|297621615|ref|YP_003709752.1|	-	0.0048	16.7	0.0	0.042	13.7	0.0	2.4	3	0	0	3	3	3	1	Calcium/calmodulin	dependent	protein	kinase	II	Association
CENP-M	PF11111.3	gi|297621615|ref|YP_003709752.1|	-	0.082	12.1	0.0	12	5.0	0.0	2.6	2	1	0	2	2	2	0	Centromere	protein	M	(CENP-M)
Peripla_BP_2	PF01497.13	gi|297621616|ref|YP_003709753.1|	-	3.4e-11	42.7	0.1	5.1e-11	42.1	0.0	1.2	1	0	0	1	1	1	1	Periplasmic	binding	protein
FecCD	PF01032.13	gi|297621617|ref|YP_003709754.1|	-	2.7e-73	246.5	25.4	3.3e-73	246.2	17.6	1.0	1	0	0	1	1	1	1	FecCD	transport	family
ABC-3	PF00950.12	gi|297621617|ref|YP_003709754.1|	-	0.0019	17.5	10.2	0.0026	17.1	6.5	1.7	1	1	0	1	1	1	1	ABC	3	transport	family
DUF3357	PF11837.3	gi|297621617|ref|YP_003709754.1|	-	0.87	9.4	2.9	7.1	6.5	0.0	3.3	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF3357)
DUF983	PF06170.7	gi|297621617|ref|YP_003709754.1|	-	1	9.5	5.1	0.78	9.8	0.7	2.9	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF983)
FUSC-like	PF12805.2	gi|297621617|ref|YP_003709754.1|	-	5.7	5.7	9.8	7.6	5.3	2.7	2.3	1	1	1	2	2	2	0	FUSC-like	inner	membrane	protein	yccS
DUF3087	PF11286.3	gi|297621617|ref|YP_003709754.1|	-	6.6	5.9	6.6	2	7.6	1.3	2.3	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3087)
ABC_tran	PF00005.22	gi|297621618|ref|YP_003709755.1|	-	6.5e-35	120.4	0.0	1.3e-34	119.4	0.0	1.4	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|297621618|ref|YP_003709755.1|	-	1.6e-15	57.8	1.1	9.7e-08	32.3	0.1	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|297621618|ref|YP_003709755.1|	-	1.1e-09	37.8	0.1	3.9e-06	26.1	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|297621618|ref|YP_003709755.1|	-	1.1e-08	34.6	0.0	3.4e-08	32.9	0.0	1.7	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
DUF2813	PF11398.3	gi|297621618|ref|YP_003709755.1|	-	0.00045	19.4	0.3	0.1	11.6	0.1	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF2813)
AAA_23	PF13476.1	gi|297621618|ref|YP_003709755.1|	-	0.00061	20.1	0.8	0.0012	19.1	0.6	1.4	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|297621618|ref|YP_003709755.1|	-	0.0017	18.0	0.7	0.074	12.7	0.1	2.2	2	0	0	2	2	2	1	NACHT	domain
AAA_29	PF13555.1	gi|297621618|ref|YP_003709755.1|	-	0.003	17.0	0.3	0.0063	16.0	0.2	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_13	PF13166.1	gi|297621618|ref|YP_003709755.1|	-	0.0034	15.9	0.7	1.3	7.4	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|297621618|ref|YP_003709755.1|	-	0.017	15.2	2.2	0.46	10.6	1.5	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|297621618|ref|YP_003709755.1|	-	0.031	13.7	0.0	0.056	12.8	0.1	1.3	1	1	0	1	1	1	0	AAA-like	domain
AAA_14	PF13173.1	gi|297621618|ref|YP_003709755.1|	-	0.055	13.3	0.4	1.5	8.7	0.1	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|297621618|ref|YP_003709755.1|	-	0.12	12.3	0.6	0.36	10.7	0.0	2.0	2	1	1	3	3	3	0	AAA	ATPase	domain
AAA_24	PF13479.1	gi|297621618|ref|YP_003709755.1|	-	0.13	11.8	0.9	0.57	9.7	0.2	2.0	2	0	0	2	2	2	0	AAA	domain
Arch_ATPase	PF01637.13	gi|297621618|ref|YP_003709755.1|	-	0.15	11.7	0.4	0.42	10.2	0.1	1.8	2	0	0	2	2	2	0	Archaeal	ATPase
MMR_HSR1	PF01926.18	gi|297621618|ref|YP_003709755.1|	-	0.16	11.9	1.2	0.34	10.8	0.8	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
cobW	PF02492.14	gi|297621618|ref|YP_003709755.1|	-	0.27	10.6	2.7	1.3	8.4	0.3	2.2	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_17	PF13207.1	gi|297621618|ref|YP_003709755.1|	-	0.31	11.8	1.9	0.44	11.3	0.3	1.9	2	1	0	2	2	2	0	AAA	domain
efb-c	PF12199.3	gi|297621620|ref|YP_003709757.1|	-	0.27	11.1	2.8	0.37	10.6	0.2	1.9	1	1	1	2	2	2	0	Extracellular	fibrinogen	binding	protein	C	terminal
Ribosomal_L23eN	PF03939.8	gi|297621620|ref|YP_003709757.1|	-	2.7	8.0	7.9	18	5.4	5.4	1.9	1	1	0	1	1	1	0	Ribosomal	protein	L23,	N-terminal	domain
IPK	PF03770.11	gi|297621621|ref|YP_003709758.1|	-	0.023	14.3	1.9	0.073	12.6	0.3	2.3	2	1	0	2	2	2	0	Inositol	polyphosphate	kinase
SNF	PF00209.13	gi|297621624|ref|YP_003709761.1|	-	9.9e-54	182.6	35.4	1.4e-28	99.6	6.4	2.4	1	1	1	2	2	2	2	Sodium:neurotransmitter	symporter	family
OppC_N	PF12911.2	gi|297621625|ref|YP_003709762.1|	-	0.036	13.4	3.3	0.05	12.9	2.3	1.2	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
PepSY_TM	PF03929.11	gi|297621625|ref|YP_003709762.1|	-	0.24	11.8	2.0	0.27	11.7	1.4	1.2	1	0	0	1	1	1	0	PepSY-associated	TM	helix
Syndecan	PF01034.15	gi|297621625|ref|YP_003709762.1|	-	0.96	9.1	3.5	0.98	9.1	2.4	1.1	1	0	0	1	1	1	0	Syndecan	domain
ParA	PF10609.4	gi|297621626|ref|YP_003709763.1|	-	1.9e-29	101.3	0.0	2.9e-29	100.7	0.0	1.3	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
CbiA	PF01656.18	gi|297621626|ref|YP_003709763.1|	-	1.1e-21	77.1	0.0	1.4e-21	76.8	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MipZ	PF09140.6	gi|297621626|ref|YP_003709763.1|	-	5e-08	32.3	0.0	1.6e-07	30.7	0.0	1.8	1	1	0	1	1	1	1	ATPase	MipZ
AAA_31	PF13614.1	gi|297621626|ref|YP_003709763.1|	-	2.5e-06	27.5	0.0	7.4e-06	25.9	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|297621626|ref|YP_003709763.1|	-	3.7e-05	22.9	1.8	0.0002	20.5	1.3	1.9	2	0	0	2	2	2	1	Anion-transporting	ATPase
Fer4_NifH	PF00142.13	gi|297621626|ref|YP_003709763.1|	-	4.7e-05	22.6	0.0	0.0021	17.2	0.1	2.2	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_26	PF13500.1	gi|297621626|ref|YP_003709763.1|	-	0.0014	18.3	0.5	0.63	9.6	0.3	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|297621626|ref|YP_003709763.1|	-	0.003	17.0	0.1	0.007	15.7	0.1	1.6	1	0	0	1	1	1	1	AAA	domain
ArgK	PF03308.11	gi|297621626|ref|YP_003709763.1|	-	0.01	14.6	0.3	0.016	14.0	0.2	1.2	1	0	0	1	1	1	0	ArgK	protein
VirC1	PF07015.6	gi|297621626|ref|YP_003709763.1|	-	0.024	13.7	0.1	0.043	12.8	0.0	1.3	1	0	0	1	1	1	0	VirC1	protein
YhfH	PF14149.1	gi|297621626|ref|YP_003709763.1|	-	0.054	13.3	0.1	0.084	12.6	0.1	1.3	1	0	0	1	1	1	0	YhfH-like	protein
YhjQ	PF06564.7	gi|297621626|ref|YP_003709763.1|	-	0.07	12.4	0.7	0.33	10.2	0.5	1.8	1	1	0	1	1	1	0	YhjQ	protein
APS_kinase	PF01583.15	gi|297621626|ref|YP_003709763.1|	-	0.09	12.4	0.1	0.14	11.7	0.0	1.2	1	0	0	1	1	1	0	Adenylylsulphate	kinase
MobB	PF03205.9	gi|297621626|ref|YP_003709763.1|	-	0.15	11.7	0.1	0.26	10.9	0.1	1.3	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SRP54	PF00448.17	gi|297621626|ref|YP_003709763.1|	-	0.17	11.3	0.9	0.32	10.4	0.2	1.7	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
PGM_PMM_I	PF02878.11	gi|297621627|ref|YP_003709764.1|	-	4.1e-41	139.7	0.0	7.3e-41	138.8	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.11	gi|297621627|ref|YP_003709764.1|	-	4.9e-23	81.4	0.0	1.2e-22	80.1	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.11	gi|297621627|ref|YP_003709764.1|	-	1.9e-22	79.4	0.1	3.6e-22	78.5	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.15	gi|297621627|ref|YP_003709764.1|	-	2.1e-09	37.2	0.0	6.1e-09	35.7	0.0	1.8	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
DEAD	PF00270.24	gi|297621628|ref|YP_003709765.1|	-	4.3e-42	143.4	0.1	7.1e-42	142.7	0.1	1.4	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|297621628|ref|YP_003709765.1|	-	3.2e-21	74.9	0.2	1e-20	73.3	0.1	2.0	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|297621628|ref|YP_003709765.1|	-	0.00057	19.7	0.0	0.00097	19.0	0.0	1.5	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
YukD	PF08817.5	gi|297621629|ref|YP_003709766.1|	-	0.016	15.7	0.0	0.041	14.4	0.0	1.7	1	0	0	1	1	1	0	WXG100	protein	secretion	system	(Wss),	protein	YukD
adh_short	PF00106.20	gi|297621631|ref|YP_003709768.1|	-	1e-27	97.0	0.0	1.4e-27	96.6	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|297621631|ref|YP_003709768.1|	-	9.7e-10	38.6	0.0	1.2e-09	38.2	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|297621631|ref|YP_003709768.1|	-	4.2e-09	36.3	0.0	6.9e-09	35.6	0.0	1.2	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|297621631|ref|YP_003709768.1|	-	9.3e-07	28.5	0.0	1.2e-06	28.1	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|297621631|ref|YP_003709768.1|	-	0.01	14.7	0.0	0.016	14.0	0.0	1.3	1	0	0	1	1	1	0	RmlD	substrate	binding	domain
F420_oxidored	PF03807.12	gi|297621631|ref|YP_003709768.1|	-	0.019	15.3	0.0	0.076	13.4	0.0	2.0	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_10	PF13460.1	gi|297621631|ref|YP_003709768.1|	-	0.031	14.2	0.0	0.048	13.6	0.0	1.4	1	0	0	1	1	1	0	NADH(P)-binding
Eno-Rase_NADH_b	PF12242.3	gi|297621631|ref|YP_003709768.1|	-	0.04	13.7	0.1	0.095	12.5	0.0	1.6	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
NAD_binding_3	PF03447.11	gi|297621631|ref|YP_003709768.1|	-	0.056	13.8	0.0	0.12	12.8	0.0	1.5	1	1	0	1	1	1	0	Homoserine	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|297621631|ref|YP_003709768.1|	-	0.1	12.7	0.1	0.3	11.1	0.0	1.8	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
7TM-7TMR_HD	PF07698.6	gi|297621632|ref|YP_003709769.1|	-	5.8e-27	94.4	25.0	1e-26	93.6	17.3	1.4	1	0	0	1	1	1	1	7TM	receptor	with	intracellular	HD	hydrolase
HD	PF01966.17	gi|297621632|ref|YP_003709769.1|	-	2.1e-17	63.2	0.0	5.8e-17	61.8	0.0	1.8	1	0	0	1	1	1	1	HD	domain
7TMR-HDED	PF07697.6	gi|297621632|ref|YP_003709769.1|	-	6.9e-12	45.5	0.5	1.9e-10	40.8	0.3	2.3	1	1	0	1	1	1	1	7TM-HD	extracellular
HDOD	PF08668.7	gi|297621632|ref|YP_003709769.1|	-	0.00088	18.5	0.1	0.0021	17.3	0.0	1.7	1	0	0	1	1	1	1	HDOD	domain
PIRT	PF15099.1	gi|297621632|ref|YP_003709769.1|	-	0.046	12.9	2.2	0.13	11.4	1.5	1.8	1	0	0	1	1	1	0	Phosphoinositide-interacting	protein	family
DUF1434	PF07254.7	gi|297621632|ref|YP_003709769.1|	-	0.054	13.3	0.1	0.054	13.3	0.1	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1434)
Epimerase	PF01370.16	gi|297621634|ref|YP_003709771.1|	-	1.1e-54	185.4	0.0	1.2e-54	185.2	0.0	1.0	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|297621634|ref|YP_003709771.1|	-	2.5e-19	69.2	0.0	3.7e-19	68.6	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|297621634|ref|YP_003709771.1|	-	2.2e-16	59.3	0.0	3.1e-16	58.8	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.10	gi|297621634|ref|YP_003709771.1|	-	2.5e-13	49.6	0.1	2.1e-12	46.5	0.1	2.3	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|297621634|ref|YP_003709771.1|	-	3.7e-10	39.1	0.0	6.9e-10	38.2	0.0	1.4	1	1	1	2	2	2	1	Male	sterility	protein
Epimerase_Csub	PF13950.1	gi|297621634|ref|YP_003709771.1|	-	1.1e-08	34.9	0.0	3.2e-08	33.4	0.0	1.8	2	0	0	2	2	2	1	UDP-glucose	4-epimerase	C-term	subunit
adh_short	PF00106.20	gi|297621634|ref|YP_003709771.1|	-	1.4e-06	28.3	0.0	2.8e-06	27.3	0.0	1.5	1	1	0	1	1	1	1	short	chain	dehydrogenase
NAD_binding_10	PF13460.1	gi|297621634|ref|YP_003709771.1|	-	1.5e-06	28.3	0.0	2.2e-06	27.7	0.0	1.2	1	0	0	1	1	1	1	NADH(P)-binding
NmrA	PF05368.8	gi|297621634|ref|YP_003709771.1|	-	3.1e-06	26.6	0.0	6.1e-06	25.6	0.0	1.5	1	0	0	1	1	1	1	NmrA-like	family
KR	PF08659.5	gi|297621634|ref|YP_003709771.1|	-	5.1e-06	26.2	0.2	3.4e-05	23.6	0.1	2.2	1	1	0	1	1	1	1	KR	domain
TrkA_N	PF02254.13	gi|297621634|ref|YP_003709771.1|	-	0.012	15.6	0.1	0.019	14.9	0.0	1.3	1	0	0	1	1	1	0	TrkA-N	domain
DAO	PF01266.19	gi|297621634|ref|YP_003709771.1|	-	0.077	11.8	0.0	0.097	11.5	0.0	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
Phe_tRNA-synt_N	PF02912.13	gi|297621635|ref|YP_003709772.1|	-	0.06	13.0	0.0	0.14	11.9	0.0	1.6	1	0	0	1	1	1	0	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
Sialidase	PF02973.11	gi|297621635|ref|YP_003709772.1|	-	0.077	11.9	0.2	0.12	11.3	0.1	1.5	1	1	0	1	1	1	0	Sialidase,	N-terminal	domain
DDE_Tnp_IS1	PF03400.8	gi|297621636|ref|YP_003709773.1|	-	2e-07	31.1	0.1	2e-07	31.1	0.1	1.1	1	0	0	1	1	1	1	IS1	transposase
rve_3	PF13683.1	gi|297621636|ref|YP_003709773.1|	-	0.0012	18.3	0.1	0.0016	17.9	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
DDE_Tnp_IS1	PF03400.8	gi|297621637|ref|YP_003709774.1|	-	2.8e-12	46.8	0.1	4.5e-12	46.2	0.1	1.5	1	1	0	1	1	1	1	IS1	transposase
DDE_Tnp_IS240	PF13610.1	gi|297621637|ref|YP_003709774.1|	-	0.00021	21.2	0.0	0.00025	21.0	0.0	1.2	1	0	0	1	1	1	1	DDE	domain
rve	PF00665.21	gi|297621638|ref|YP_003709775.1|	-	3e-21	75.7	0.0	4.6e-21	75.1	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.1	gi|297621638|ref|YP_003709775.1|	-	4.8e-15	55.3	1.3	9.7e-15	54.3	0.9	1.5	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.1	gi|297621638|ref|YP_003709775.1|	-	1.7e-13	49.8	0.3	3.7e-13	48.7	0.2	1.6	1	0	0	1	1	1	1	Integrase	core	domain
rve_2	PF13333.1	gi|297621638|ref|YP_003709775.1|	-	0.00012	22.0	2.9	0.00024	21.0	2.0	1.6	1	0	0	1	1	1	1	Integrase	core	domain
HpaB_N	PF11794.3	gi|297621638|ref|YP_003709775.1|	-	0.035	13.5	0.4	5	6.4	0.0	2.2	2	0	0	2	2	2	0	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HTH_32	PF13565.1	gi|297621638|ref|YP_003709775.1|	-	0.064	14.0	0.3	0.064	14.0	0.2	2.8	3	1	0	3	3	3	0	Homeodomain-like	domain
HTH_Tnp_1	PF01527.15	gi|297621639|ref|YP_003709776.1|	-	7.4e-12	45.0	0.4	9.5e-12	44.7	0.3	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.1	gi|297621639|ref|YP_003709776.1|	-	1.7e-05	24.7	0.0	2.5e-05	24.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297621639|ref|YP_003709776.1|	-	0.00018	21.0	0.0	0.00027	20.4	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
RepB-RCR_reg	PF10723.4	gi|297621639|ref|YP_003709776.1|	-	0.0051	16.5	0.2	0.059	13.0	0.0	2.0	2	0	0	2	2	2	1	Replication	regulatory	protein	RepB
HTH_29	PF13551.1	gi|297621639|ref|YP_003709776.1|	-	0.023	14.8	0.0	0.026	14.6	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
MTBP_C	PF14920.1	gi|297621639|ref|YP_003709776.1|	-	0.093	12.2	0.1	0.097	12.1	0.0	1.1	1	0	0	1	1	1	0	MDM2-binding
DivIC	PF04977.10	gi|297621639|ref|YP_003709776.1|	-	0.27	10.7	1.9	0.36	10.3	1.3	1.2	1	0	0	1	1	1	0	Septum	formation	initiator
Zn_Tnp_IS1	PF03811.8	gi|297621640|ref|YP_003709777.1|	-	1e-05	24.9	3.7	1.4e-05	24.4	2.6	1.2	1	0	0	1	1	1	1	InsA	N-terminal	domain
zf-ISL3	PF14690.1	gi|297621640|ref|YP_003709777.1|	-	0.012	15.5	2.6	0.17	11.9	0.3	2.2	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF2387	PF09526.5	gi|297621640|ref|YP_003709777.1|	-	0.021	14.7	0.9	0.027	14.4	0.7	1.2	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
DNA_ligase_ZBD	PF03119.11	gi|297621640|ref|YP_003709777.1|	-	0.037	13.7	2.9	0.06	13.0	0.5	2.1	1	1	1	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Zn-ribbon_8	PF09723.5	gi|297621640|ref|YP_003709777.1|	-	0.068	13.1	1.8	1.5	8.8	0.3	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
Argos	PF11581.3	gi|297621640|ref|YP_003709777.1|	-	0.076	12.9	0.5	0.086	12.7	0.3	1.0	1	0	0	1	1	1	0	Antagonist	of	EGFR	signalling,	Argos
zf-C3HC	PF07967.8	gi|297621640|ref|YP_003709777.1|	-	0.077	12.7	0.2	0.093	12.4	0.1	1.1	1	0	0	1	1	1	0	C3HC	zinc	finger-like
Ribosomal_S14	PF00253.16	gi|297621640|ref|YP_003709777.1|	-	0.099	12.0	1.6	0.13	11.7	0.2	1.8	2	0	0	2	2	2	0	Ribosomal	protein	S14p/S29e
zf-H2C2_2	PF13465.1	gi|297621640|ref|YP_003709777.1|	-	0.13	12.6	3.6	0.72	10.2	0.1	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
Rad50_zn_hook	PF04423.9	gi|297621640|ref|YP_003709777.1|	-	0.24	10.8	3.2	0.13	11.7	0.4	2.0	1	1	2	3	3	3	0	Rad50	zinc	hook	motif
DUF3797	PF12677.2	gi|297621640|ref|YP_003709777.1|	-	0.25	10.9	1.4	2.3	7.9	0.0	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
Zn_Tnp_IS1595	PF12760.2	gi|297621640|ref|YP_003709777.1|	-	0.4	10.5	3.0	0.69	9.7	2.0	1.4	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
CpXC	PF14353.1	gi|297621640|ref|YP_003709777.1|	-	1.2	9.0	3.5	1.5	8.7	0.1	2.0	1	1	1	2	2	2	0	CpXC	protein
DUF4200	PF13863.1	gi|297621641|ref|YP_003709778.1|	-	0.0079	16.1	2.9	0.0079	16.1	2.0	2.4	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4200)
Sipho_Gp157	PF05565.6	gi|297621641|ref|YP_003709778.1|	-	0.0083	15.7	1.3	0.0083	15.7	0.9	2.2	2	1	0	2	2	2	1	Siphovirus	Gp157
Surfac_D-trimer	PF09006.6	gi|297621641|ref|YP_003709778.1|	-	0.009	15.7	3.7	0.19	11.5	0.1	3.0	3	0	0	3	3	3	1	Lung	surfactant	protein	D	coiled-coil	trimerisation
Hemerythrin	PF01814.18	gi|297621641|ref|YP_003709778.1|	-	0.013	15.6	2.2	0.039	14.1	0.6	2.0	1	1	1	2	2	2	0	Hemerythrin	HHE	cation	binding	domain
Fib_alpha	PF08702.5	gi|297621641|ref|YP_003709778.1|	-	0.013	15.6	1.1	0.013	15.6	0.7	1.6	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Bap31	PF05529.7	gi|297621641|ref|YP_003709778.1|	-	0.017	14.5	2.5	0.024	14.1	1.8	1.3	1	0	0	1	1	1	0	B-cell	receptor-associated	protein	31-like
Transposase_22	PF02994.9	gi|297621641|ref|YP_003709778.1|	-	0.018	13.5	6.6	0.0069	14.9	2.6	1.5	1	1	1	2	2	2	0	L1	transposable	element
Laminin_II	PF06009.7	gi|297621641|ref|YP_003709778.1|	-	0.031	14.0	0.5	0.031	14.0	0.3	2.3	1	1	2	3	3	3	0	Laminin	Domain	II
FH2	PF02181.18	gi|297621641|ref|YP_003709778.1|	-	0.055	12.3	4.6	0.074	11.9	3.2	1.4	1	1	0	1	1	1	0	Formin	Homology	2	Domain
DUF4140	PF13600.1	gi|297621641|ref|YP_003709778.1|	-	0.066	13.6	8.5	0.077	13.4	0.3	2.6	2	1	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
HAP1_N	PF04849.8	gi|297621641|ref|YP_003709778.1|	-	0.096	11.6	8.6	0.94	8.3	2.4	2.1	2	0	0	2	2	2	0	HAP1	N-terminal	conserved	region
DUF342	PF03961.8	gi|297621641|ref|YP_003709778.1|	-	0.2	10.0	8.9	0.41	9.0	6.2	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
MAP7	PF05672.6	gi|297621641|ref|YP_003709778.1|	-	0.44	9.9	10.8	0.67	9.3	7.5	1.3	1	0	0	1	1	1	0	MAP7	(E-MAP-115)	family
IF-2B	PF01008.12	gi|297621641|ref|YP_003709778.1|	-	0.59	9.0	4.7	0.25	10.2	0.2	1.9	1	1	1	2	2	2	0	Initiation	factor	2	subunit	family
Snapin_Pallidin	PF14712.1	gi|297621641|ref|YP_003709778.1|	-	0.61	10.4	6.0	0.53	10.6	0.2	2.8	1	1	2	3	3	3	0	Snapin/Pallidin
Gp-FAR-1	PF05823.7	gi|297621641|ref|YP_003709778.1|	-	1.1	9.2	10.2	0.46	10.4	0.6	2.1	1	1	0	2	2	2	0	Nematode	fatty	acid	retinoid	binding	protein	(Gp-FAR-1)
Rho_Binding	PF08912.6	gi|297621641|ref|YP_003709778.1|	-	1.6	9.0	13.0	1.8	8.8	0.4	3.2	2	1	1	3	3	3	0	Rho	Binding
Tropomyosin_1	PF12718.2	gi|297621641|ref|YP_003709778.1|	-	2.5	7.9	14.6	0.42	10.4	0.6	2.3	2	1	0	2	2	2	0	Tropomyosin	like
bZIP_Maf	PF03131.12	gi|297621641|ref|YP_003709778.1|	-	3.6	7.9	9.1	0.17	12.2	0.5	2.3	2	1	0	2	2	2	0	bZIP	Maf	transcription	factor
Seryl_tRNA_N	PF02403.17	gi|297621641|ref|YP_003709778.1|	-	4.1	7.4	14.6	0.14	12.1	1.1	2.6	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
TMF_DNA_bd	PF12329.3	gi|297621641|ref|YP_003709778.1|	-	7	6.5	16.2	0.23	11.2	1.1	3.0	2	1	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
DivIC	PF04977.10	gi|297621641|ref|YP_003709778.1|	-	8.5	5.9	11.6	1.8	8.0	0.8	2.9	1	1	2	3	3	3	0	Septum	formation	initiator
DNA_pol3_delta2	PF13177.1	gi|297621642|ref|YP_003709779.1|	-	5.1e-48	162.7	0.0	1.2e-47	161.6	0.0	1.6	2	0	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
DNA_pol3_gamma3	PF12169.3	gi|297621642|ref|YP_003709779.1|	-	4.1e-14	52.5	0.1	6.8e-14	51.8	0.0	1.4	1	0	0	1	1	1	1	DNA	polymerase	III	subunits	gamma	and	tau	domain	III
AAA	PF00004.24	gi|297621642|ref|YP_003709779.1|	-	4.1e-12	46.4	0.1	1.6e-11	44.5	0.0	2.0	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|297621642|ref|YP_003709779.1|	-	2.5e-07	30.0	0.0	2.1e-05	23.7	0.0	2.9	3	0	0	3	3	3	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|297621642|ref|YP_003709779.1|	-	7.4e-07	29.3	0.0	2.3e-06	27.7	0.0	1.8	2	0	0	2	2	1	1	AAA	domain
AAA_5	PF07728.9	gi|297621642|ref|YP_003709779.1|	-	1.5e-06	27.9	0.4	6.6e-05	22.6	0.1	3.2	3	1	0	3	3	3	1	AAA	domain	(dynein-related	subfamily)
TIP49	PF06068.8	gi|297621642|ref|YP_003709779.1|	-	1.1e-05	24.3	0.2	0.051	12.3	0.0	2.6	2	1	0	2	2	2	2	TIP49	C-terminus
AAA_14	PF13173.1	gi|297621642|ref|YP_003709779.1|	-	0.00011	22.0	0.1	0.0005	19.9	0.0	2.1	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|297621642|ref|YP_003709779.1|	-	0.00013	21.9	0.3	0.00065	19.7	0.0	2.4	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|297621642|ref|YP_003709779.1|	-	0.00029	21.6	0.2	0.0015	19.3	0.0	2.2	1	1	1	2	2	2	1	AAA	domain
Sigma54_activ_2	PF14532.1	gi|297621642|ref|YP_003709779.1|	-	0.0003	20.8	0.1	0.26	11.3	0.0	3.2	2	1	0	2	2	2	1	Sigma-54	interaction	domain
AAA_30	PF13604.1	gi|297621642|ref|YP_003709779.1|	-	0.0052	16.3	0.0	0.037	13.5	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|297621642|ref|YP_003709779.1|	-	0.012	15.4	0.2	0.077	12.8	0.0	2.4	2	1	1	3	3	3	0	Shikimate	kinase
KaiC	PF06745.8	gi|297621642|ref|YP_003709779.1|	-	0.017	14.2	1.0	0.31	10.1	0.0	2.8	3	0	0	3	3	3	0	KaiC
ResIII	PF04851.10	gi|297621642|ref|YP_003709779.1|	-	0.03	14.1	0.1	8.7	6.1	0.0	2.5	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_18	PF13238.1	gi|297621642|ref|YP_003709779.1|	-	0.031	14.5	0.0	0.08	13.2	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
PIF1	PF05970.9	gi|297621642|ref|YP_003709779.1|	-	0.058	12.3	0.1	0.19	10.6	0.1	1.7	1	1	0	1	1	1	0	PIF1-like	helicase
AAA_33	PF13671.1	gi|297621642|ref|YP_003709779.1|	-	0.077	12.8	0.0	0.28	11.0	0.0	2.1	1	0	0	1	1	1	0	AAA	domain
AAA_24	PF13479.1	gi|297621642|ref|YP_003709779.1|	-	0.092	12.3	0.4	0.87	9.1	0.1	2.5	2	1	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|297621642|ref|YP_003709779.1|	-	0.1	12.2	0.0	0.52	9.9	0.0	2.2	2	1	0	2	2	2	0	NACHT	domain
RNA_helicase	PF00910.17	gi|297621642|ref|YP_003709779.1|	-	0.11	12.7	0.0	0.28	11.3	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
AAA_28	PF13521.1	gi|297621642|ref|YP_003709779.1|	-	0.14	12.1	0.0	0.35	10.8	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
YbaB_DNA_bd	PF02575.11	gi|297621643|ref|YP_003709780.1|	-	3.9e-27	93.9	0.6	4.6e-27	93.7	0.4	1.0	1	0	0	1	1	1	1	YbaB/EbfC	DNA-binding	family
DUF1073	PF06381.6	gi|297621643|ref|YP_003709780.1|	-	0.025	13.0	0.1	0.028	12.9	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1073)
AAL_decarboxy	PF03306.8	gi|297621643|ref|YP_003709780.1|	-	0.056	12.4	0.1	0.068	12.2	0.0	1.0	1	0	0	1	1	1	0	Alpha-acetolactate	decarboxylase
DUF4140	PF13600.1	gi|297621643|ref|YP_003709780.1|	-	0.23	11.9	2.2	2.8	8.4	1.6	2.0	1	1	1	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
SlyX	PF04102.7	gi|297621643|ref|YP_003709780.1|	-	0.24	11.8	2.7	0.62	10.4	2.0	1.6	2	0	0	2	2	2	0	SlyX
FlxA	PF14282.1	gi|297621643|ref|YP_003709780.1|	-	0.54	10.2	7.1	0.93	9.4	4.9	1.3	1	0	0	1	1	1	0	FlxA-like	protein
DUF964	PF06133.6	gi|297621643|ref|YP_003709780.1|	-	0.87	9.6	7.5	1.6	8.7	5.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF964)
PEP-utilizers_C	PF02896.13	gi|297621644|ref|YP_003709781.1|	-	3.4e-93	311.7	0.0	6.1e-93	310.9	0.0	1.4	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilisers_N	PF05524.8	gi|297621644|ref|YP_003709781.1|	-	1.4e-22	79.7	0.1	3e-22	78.7	0.1	1.5	1	0	0	1	1	1	1	PEP-utilising	enzyme,	N-terminal
PEP-utilizers	PF00391.18	gi|297621644|ref|YP_003709781.1|	-	1e-17	63.4	0.1	2.1e-17	62.4	0.1	1.5	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
HpcH_HpaI	PF03328.9	gi|297621644|ref|YP_003709781.1|	-	0.0046	15.8	0.3	0.014	14.3	0.0	1.8	2	0	0	2	2	2	1	HpcH/HpaI	aldolase/citrate	lyase	family
DUF1548	PF07579.6	gi|297621644|ref|YP_003709781.1|	-	0.0047	17.0	0.0	0.015	15.4	0.0	1.8	1	0	0	1	1	1	1	Domain	of	Unknown	Function	(DUF1548)
OmpH	PF03938.9	gi|297621644|ref|YP_003709781.1|	-	0.025	14.5	0.0	0.057	13.3	0.0	1.5	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
KH_5	PF13184.1	gi|297621644|ref|YP_003709781.1|	-	0.093	12.5	0.6	0.32	10.8	0.4	1.9	1	0	0	1	1	1	0	NusA-like	KH	domain
MutS_IV	PF05190.13	gi|297621644|ref|YP_003709781.1|	-	0.44	10.7	3.9	0.61	10.3	1.3	2.3	3	0	0	3	3	3	0	MutS	family	domain	IV
PTS-HPr	PF00381.14	gi|297621645|ref|YP_003709782.1|	-	6.4e-26	90.0	0.4	7.3e-26	89.8	0.3	1.0	1	0	0	1	1	1	1	PTS	HPr	component	phosphorylation	site
DUF1401	PF07180.6	gi|297621645|ref|YP_003709782.1|	-	0.035	13.8	0.1	0.039	13.7	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1401)
CBM-like	PF14683.1	gi|297621645|ref|YP_003709782.1|	-	0.073	12.7	0.1	0.073	12.7	0.0	1.1	1	0	0	1	1	1	0	Polysaccharide	lyase	family	4,	domain	III
Hpr_kinase_C	PF07475.7	gi|297621646|ref|YP_003709783.1|	-	4e-64	215.0	0.2	5.2e-64	214.6	0.1	1.1	1	0	0	1	1	1	1	HPr	Serine	kinase	C-terminal	domain
Hpr_kinase_N	PF02603.11	gi|297621646|ref|YP_003709783.1|	-	3.9e-29	100.9	0.0	6.1e-29	100.2	0.0	1.3	1	0	0	1	1	1	1	HPr	Serine	kinase	N	terminus
DRTGG	PF07085.7	gi|297621646|ref|YP_003709783.1|	-	0.0016	18.0	0.0	0.0028	17.2	0.0	1.4	1	0	0	1	1	1	1	DRTGG	domain
PucR	PF07905.6	gi|297621646|ref|YP_003709783.1|	-	0.077	12.5	0.0	0.22	11.1	0.0	1.7	2	0	0	2	2	2	0	Purine	catabolism	regulatory	protein-like	family
SMI1_KNR4	PF09346.5	gi|297621647|ref|YP_003709784.1|	-	0.00097	19.1	0.2	0.0024	17.8	0.1	1.7	1	1	0	1	1	1	1	SMI1	/	KNR4	family	(SUKH-1)
PAS_3	PF08447.6	gi|297621647|ref|YP_003709784.1|	-	0.097	12.7	0.0	9	6.4	0.0	2.4	2	0	0	2	2	2	0	PAS	fold
Pyr_redox_2	PF07992.9	gi|297621648|ref|YP_003709785.1|	-	0.016	15.1	0.0	0.017	14.9	0.0	1.3	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|297621648|ref|YP_003709785.1|	-	0.067	13.2	0.0	0.082	12.9	0.0	1.2	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Competence	PF03772.11	gi|297621649|ref|YP_003709786.1|	-	2.7e-41	141.4	36.2	2.7e-41	141.4	25.1	1.7	2	0	0	2	2	2	1	Competence	protein
BacA	PF02673.13	gi|297621650|ref|YP_003709787.1|	-	4.6e-68	229.2	14.4	5.6e-68	228.9	10.0	1.0	1	0	0	1	1	1	1	Bacitracin	resistance	protein	BacA
DUF2592	PF10766.4	gi|297621650|ref|YP_003709787.1|	-	0.022	14.0	0.0	0.065	12.5	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2592)
FtsK_SpoIIIE	PF01580.13	gi|297621651|ref|YP_003709788.1|	-	3.3e-55	186.7	0.1	6e-55	185.9	0.0	1.4	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
Ftsk_gamma	PF09397.5	gi|297621651|ref|YP_003709788.1|	-	6.6e-26	89.8	0.0	1.4e-25	88.8	0.0	1.5	1	0	0	1	1	1	1	Ftsk	gamma	domain
AAA_10	PF12846.2	gi|297621651|ref|YP_003709788.1|	-	6.3e-09	35.6	0.2	0.00032	20.2	0.0	2.3	1	1	1	2	2	2	2	AAA-like	domain
DUF4117	PF13491.1	gi|297621651|ref|YP_003709788.1|	-	0.00019	20.9	18.6	0.001	18.5	12.9	2.2	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4117)
TrwB_AAD_bind	PF10412.4	gi|297621651|ref|YP_003709788.1|	-	0.0015	17.2	0.0	0.018	13.6	0.0	2.1	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_22	PF13401.1	gi|297621651|ref|YP_003709788.1|	-	0.0015	18.6	0.0	0.0064	16.6	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
DUF87	PF01935.12	gi|297621651|ref|YP_003709788.1|	-	0.0053	16.6	0.1	0.021	14.6	0.0	1.8	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
T2SE	PF00437.15	gi|297621651|ref|YP_003709788.1|	-	0.0063	15.4	0.0	0.012	14.5	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
DEAD	PF00270.24	gi|297621651|ref|YP_003709788.1|	-	0.015	14.7	0.0	0.039	13.4	0.0	1.7	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
Cupin_4	PF08007.7	gi|297621651|ref|YP_003709788.1|	-	0.068	12.4	0.0	0.14	11.3	0.0	1.4	1	0	0	1	1	1	0	Cupin	superfamily	protein
ResIII	PF04851.10	gi|297621651|ref|YP_003709788.1|	-	0.11	12.3	0.1	0.37	10.5	0.0	1.9	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_25	PF13481.1	gi|297621651|ref|YP_003709788.1|	-	0.11	11.8	0.7	0.64	9.3	0.5	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|297621651|ref|YP_003709788.1|	-	0.13	11.7	0.0	0.32	10.5	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Lactamase_B	PF00753.22	gi|297621652|ref|YP_003709789.1|	-	7.4e-19	68.1	0.3	8.5e-19	67.9	0.2	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|297621652|ref|YP_003709789.1|	-	7.4e-13	48.4	1.3	1e-12	48.0	0.9	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|297621652|ref|YP_003709789.1|	-	5.8e-06	26.0	0.1	2.9e-05	23.8	0.1	2.0	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
DnaJ	PF00226.26	gi|297621653|ref|YP_003709790.1|	-	4.8e-30	103.0	3.8	7.8e-30	102.4	2.6	1.4	1	0	0	1	1	1	1	DnaJ	domain
CTDII	PF01556.13	gi|297621653|ref|YP_003709790.1|	-	7e-28	96.3	1.1	1.3e-20	73.0	0.0	2.6	2	0	0	2	2	2	2	DnaJ	C	terminal	domain
DnaJ_CXXCXGXG	PF00684.14	gi|297621653|ref|YP_003709790.1|	-	1e-11	44.6	20.8	1.8e-11	43.8	14.4	1.4	1	0	0	1	1	1	1	DnaJ	central	domain
Cytochrom_c3_2	PF14537.1	gi|297621653|ref|YP_003709790.1|	-	0.034	14.4	6.3	0.034	14.4	0.7	2.4	2	0	0	2	2	2	0	Cytochrome	c3
Cytochrom_C550	PF14495.1	gi|297621653|ref|YP_003709790.1|	-	2.1	7.8	6.1	15	5.0	3.5	2.3	1	1	1	2	2	2	0	Cytochrome	c-550	domain
DZR	PF12773.2	gi|297621653|ref|YP_003709790.1|	-	3	7.7	13.2	7.8	6.4	9.2	1.7	1	1	0	1	1	1	0	Double	zinc	ribbon
Cytochrome_CBB3	PF13442.1	gi|297621653|ref|YP_003709790.1|	-	7.8	6.7	7.3	4.4e+02	1.1	5.1	3.2	1	1	0	1	1	1	0	Cytochrome	C	oxidase,	cbb3-type,	subunit	III
Ribosomal_S21	PF01165.15	gi|297621655|ref|YP_003709792.1|	-	2.6e-19	68.4	4.5	2.9e-19	68.2	3.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S21
Integrase_DNA	PF02920.10	gi|297621655|ref|YP_003709792.1|	-	0.011	15.1	0.3	0.017	14.4	0.2	1.5	1	1	0	1	1	1	0	DNA	binding	domain	of	tn916	integrase
RBD	PF02196.10	gi|297621655|ref|YP_003709792.1|	-	0.062	13.0	0.1	0.074	12.8	0.1	1.3	1	0	0	1	1	1	0	Raf-like	Ras-binding	domain
Peptidase_M22	PF00814.20	gi|297621656|ref|YP_003709793.1|	-	6.7e-21	74.9	0.0	9.2e-21	74.5	0.0	1.2	1	0	0	1	1	1	1	Glycoprotease	family
HD_assoc	PF13286.1	gi|297621657|ref|YP_003709794.1|	-	8.5e-13	48.3	0.1	1.9e-12	47.2	0.1	1.6	1	0	0	1	1	1	1	Phosphohydrolase-associated	domain
HD	PF01966.17	gi|297621657|ref|YP_003709794.1|	-	2.2e-08	34.1	0.0	5e-08	32.9	0.0	1.7	1	0	0	1	1	1	1	HD	domain
ApoC-I	PF04691.7	gi|297621658|ref|YP_003709795.1|	-	0.022	14.4	0.6	0.4	10.4	0.1	2.7	2	0	0	2	2	2	0	Apolipoprotein	C-I	(ApoC-1)
DUF1128	PF06569.6	gi|297621659|ref|YP_003709796.1|	-	0.0042	16.7	0.0	0.012	15.3	0.0	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1128)
HTH_Tnp_Mu_2	PF09039.6	gi|297621659|ref|YP_003709796.1|	-	0.097	12.4	0.1	4.8	6.9	0.0	2.4	2	0	0	2	2	2	0	Mu	DNA	binding,	I	gamma	subdomain
Lon_C	PF05362.8	gi|297621660|ref|YP_003709797.1|	-	9.8e-76	253.6	0.5	4.4e-75	251.4	0.0	2.3	2	1	1	3	3	3	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
LON	PF02190.11	gi|297621660|ref|YP_003709797.1|	-	2.6e-29	102.3	1.1	5e-29	101.4	0.8	1.5	1	0	0	1	1	1	1	ATP-dependent	protease	La	(LON)	domain
AAA	PF00004.24	gi|297621660|ref|YP_003709797.1|	-	3.6e-22	78.9	0.0	8.1e-22	77.8	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ChlI	PF13541.1	gi|297621660|ref|YP_003709797.1|	-	5.2e-09	35.6	0.0	2.5e-08	33.4	0.0	2.1	2	0	0	2	2	2	1	Subunit	ChlI	of	Mg-chelatase
AAA_5	PF07728.9	gi|297621660|ref|YP_003709797.1|	-	5.1e-08	32.7	0.0	1.1e-07	31.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.1	gi|297621660|ref|YP_003709797.1|	-	4.1e-06	27.6	1.1	1e-05	26.3	0.1	2.4	2	1	0	2	2	1	1	AAA	domain
AAA_2	PF07724.9	gi|297621660|ref|YP_003709797.1|	-	1.2e-05	25.2	0.0	2.9e-05	24.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_22	PF13401.1	gi|297621660|ref|YP_003709797.1|	-	1.2e-05	25.4	1.0	0.0028	17.7	0.0	3.5	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|297621660|ref|YP_003709797.1|	-	3.7e-05	23.8	0.0	0.00014	21.8	0.0	2.0	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|297621660|ref|YP_003709797.1|	-	0.00017	21.8	0.0	0.00089	19.5	0.0	2.3	1	0	0	1	1	1	1	AAA	domain
AAA_PrkA	PF08298.6	gi|297621660|ref|YP_003709797.1|	-	0.00029	19.6	0.0	0.00097	17.9	0.0	1.8	2	0	0	2	2	2	1	PrkA	AAA	domain
AAA_14	PF13173.1	gi|297621660|ref|YP_003709797.1|	-	0.001	18.9	0.0	0.0026	17.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
RNA_helicase	PF00910.17	gi|297621660|ref|YP_003709797.1|	-	0.0036	17.4	0.0	0.0095	16.1	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
RuvB_N	PF05496.7	gi|297621660|ref|YP_003709797.1|	-	0.0037	16.3	0.0	0.023	13.7	0.0	2.1	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_24	PF13479.1	gi|297621660|ref|YP_003709797.1|	-	0.0055	16.3	0.1	0.013	15.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|297621660|ref|YP_003709797.1|	-	0.0077	16.1	0.8	0.028	14.2	0.0	2.2	2	0	0	2	2	2	1	Shikimate	kinase
ATP-synt_ab	PF00006.20	gi|297621660|ref|YP_003709797.1|	-	0.0093	15.4	0.0	0.013	15.0	0.0	1.3	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_25	PF13481.1	gi|297621660|ref|YP_003709797.1|	-	0.012	14.9	0.1	0.027	13.8	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|297621660|ref|YP_003709797.1|	-	0.015	14.9	0.0	0.061	13.0	0.0	2.0	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.10	gi|297621660|ref|YP_003709797.1|	-	0.018	14.7	0.1	0.052	13.2	0.0	1.8	1	0	0	1	1	1	0	NTPase
Pox_D5	PF03288.11	gi|297621660|ref|YP_003709797.1|	-	0.018	15.2	0.9	0.1	12.8	0.1	2.6	2	0	0	2	2	2	0	Poxvirus	D5	protein-like
ABC_tran	PF00005.22	gi|297621660|ref|YP_003709797.1|	-	0.026	14.8	0.5	0.39	10.9	0.0	2.7	2	1	0	2	2	2	0	ABC	transporter
AAA_3	PF07726.6	gi|297621660|ref|YP_003709797.1|	-	0.039	13.5	0.0	0.085	12.4	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|297621660|ref|YP_003709797.1|	-	0.052	13.2	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF258	PF03193.11	gi|297621660|ref|YP_003709797.1|	-	0.07	12.3	0.0	0.18	10.9	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_21	PF13304.1	gi|297621660|ref|YP_003709797.1|	-	0.075	12.9	5.9	0.24	11.2	0.0	2.9	2	2	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.12	gi|297621660|ref|YP_003709797.1|	-	0.087	12.2	0.0	0.17	11.2	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_30	PF13604.1	gi|297621660|ref|YP_003709797.1|	-	0.12	11.8	0.0	0.32	10.5	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|297621660|ref|YP_003709797.1|	-	0.16	11.8	0.0	0.37	10.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
CTP_transf_2	PF01467.21	gi|297621661|ref|YP_003709798.1|	-	1.2e-08	35.2	0.0	2.2e-08	34.2	0.0	1.4	1	1	0	1	1	1	1	Cytidylyltransferase
FAD_syn	PF06574.7	gi|297621661|ref|YP_003709798.1|	-	0.019	14.5	0.0	0.031	13.9	0.0	1.4	1	0	0	1	1	1	0	FAD	synthetase
Pantoate_ligase	PF02569.10	gi|297621661|ref|YP_003709798.1|	-	0.11	11.2	0.0	0.19	10.4	0.0	1.3	1	0	0	1	1	1	0	Pantoate-beta-alanine	ligase
Rhomboid	PF01694.17	gi|297621662|ref|YP_003709799.1|	-	3.5e-28	98.4	11.0	3.5e-28	98.4	7.6	1.7	2	0	0	2	2	2	1	Rhomboid	family
DUF3582	PF12122.3	gi|297621662|ref|YP_003709799.1|	-	1.6e-09	37.6	0.0	2.7e-09	36.9	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3582)
DER1	PF04511.10	gi|297621662|ref|YP_003709799.1|	-	0.0063	16.0	2.9	0.0063	16.0	2.0	1.5	2	0	0	2	2	2	1	Der1-like	family
DUF1751	PF08551.5	gi|297621662|ref|YP_003709799.1|	-	0.0078	16.5	3.1	0.0078	16.5	2.1	2.1	2	1	0	2	2	2	1	Eukaryotic	integral	membrane	protein	(DUF1751)
DUF1967	PF09269.6	gi|297621662|ref|YP_003709799.1|	-	0.069	12.8	0.0	0.15	11.7	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1967)
Lactamase_B_2	PF12706.2	gi|297621663|ref|YP_003709800.1|	-	3.8e-25	88.5	2.2	5.8e-25	87.9	1.5	1.3	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|297621663|ref|YP_003709800.1|	-	7.8e-11	41.9	1.8	1.2e-10	41.3	0.2	1.9	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
NmrA	PF05368.8	gi|297621663|ref|YP_003709800.1|	-	0.03	13.5	0.0	0.054	12.7	0.0	1.4	1	0	0	1	1	1	0	NmrA-like	family
Phage_integrase	PF00589.17	gi|297621664|ref|YP_003709801.1|	-	9.3e-41	139.3	1.0	1.4e-40	138.8	0.2	1.6	2	0	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_1	PF02899.12	gi|297621664|ref|YP_003709801.1|	-	2.5e-16	59.6	2.7	7.6e-16	58.0	0.8	2.5	2	1	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_4	PF13495.1	gi|297621664|ref|YP_003709801.1|	-	9.8e-11	41.8	1.1	1.7e-09	37.8	0.3	2.6	2	0	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
Integrase_1	PF12835.2	gi|297621664|ref|YP_003709801.1|	-	0.00013	21.7	0.7	0.0005	19.8	0.0	2.1	2	1	1	3	3	3	1	Integrase
Phage_int_SAM_2	PF12834.2	gi|297621664|ref|YP_003709801.1|	-	0.13	12.6	1.1	0.5	10.7	0.3	2.3	2	1	0	2	2	2	0	Phage	integrase,	N-terminal
Glycos_transf_1	PF00534.15	gi|297621665|ref|YP_003709802.1|	-	2e-11	43.6	0.0	3.8e-11	42.6	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|297621665|ref|YP_003709802.1|	-	3.8e-08	33.4	0.0	8.5e-08	32.3	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|297621665|ref|YP_003709802.1|	-	7.3e-08	32.6	0.0	1.3e-07	31.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.15	gi|297621666|ref|YP_003709803.1|	-	2e-10	40.3	0.0	4.8e-10	39.1	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|297621666|ref|YP_003709803.1|	-	6.7e-06	26.2	0.0	1.9e-05	24.8	0.0	1.8	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|297621666|ref|YP_003709803.1|	-	5.1e-05	23.4	0.0	8.5e-05	22.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
ABC_tran	PF00005.22	gi|297621667|ref|YP_003709804.1|	-	9.9e-45	152.2	0.3	4.3e-21	75.6	0.0	2.8	3	0	0	3	3	3	2	ABC	transporter
AAA_21	PF13304.1	gi|297621667|ref|YP_003709804.1|	-	6.7e-19	68.9	2.4	0.0006	19.8	0.0	4.3	3	1	1	4	4	4	4	AAA	domain
ABC_tran_2	PF12848.2	gi|297621667|ref|YP_003709804.1|	-	1.3e-15	56.9	5.3	7.5e-15	54.5	2.1	2.2	2	0	0	2	2	2	1	ABC	transporter
AAA_15	PF13175.1	gi|297621667|ref|YP_003709804.1|	-	4.8e-08	32.4	4.3	0.73	8.8	0.6	4.2	3	1	0	4	4	4	3	AAA	ATPase	domain
SMC_N	PF02463.14	gi|297621667|ref|YP_003709804.1|	-	2.2e-07	30.3	4.4	0.1	11.8	0.6	3.9	3	1	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|297621667|ref|YP_003709804.1|	-	3.6e-07	29.6	0.3	0.0039	16.6	0.0	2.6	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|297621667|ref|YP_003709804.1|	-	7.9e-07	29.5	9.9	0.0014	18.9	0.0	3.2	2	1	1	3	3	3	2	AAA	domain
Miro	PF08477.8	gi|297621667|ref|YP_003709804.1|	-	1.9e-06	28.3	0.1	0.017	15.5	0.0	2.7	2	0	0	2	2	2	2	Miro-like	protein
AAA	PF00004.24	gi|297621667|ref|YP_003709804.1|	-	2.4e-06	27.7	1.1	0.08	13.1	0.0	3.7	3	1	0	3	3	3	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|297621667|ref|YP_003709804.1|	-	3.3e-06	26.3	0.9	0.0082	15.3	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|297621667|ref|YP_003709804.1|	-	7.3e-06	26.8	0.0	0.2	12.4	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
ArgK	PF03308.11	gi|297621667|ref|YP_003709804.1|	-	4.3e-05	22.4	1.7	0.15	10.8	0.1	2.4	2	0	0	2	2	2	2	ArgK	protein
NACHT	PF05729.7	gi|297621667|ref|YP_003709804.1|	-	5.6e-05	22.8	0.6	0.26	10.9	0.0	2.4	2	0	0	2	2	2	2	NACHT	domain
NTPase_1	PF03266.10	gi|297621667|ref|YP_003709804.1|	-	0.00016	21.3	0.5	0.71	9.5	0.0	2.8	2	0	0	2	2	2	2	NTPase
AAA_22	PF13401.1	gi|297621667|ref|YP_003709804.1|	-	0.00019	21.5	0.4	0.59	10.2	0.1	2.8	2	1	0	2	2	2	2	AAA	domain
ATP-synt_ab	PF00006.20	gi|297621667|ref|YP_003709804.1|	-	0.00022	20.7	0.1	0.42	10.0	0.0	2.3	2	0	0	2	2	2	2	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
RNA_helicase	PF00910.17	gi|297621667|ref|YP_003709804.1|	-	0.00025	21.1	0.1	0.69	10.1	0.0	2.6	2	0	0	2	2	2	2	RNA	helicase
MMR_HSR1	PF01926.18	gi|297621667|ref|YP_003709804.1|	-	0.00028	20.7	0.6	1.2	9.1	0.0	2.9	3	1	0	3	3	2	2	50S	ribosome-binding	GTPase
AAA_16	PF13191.1	gi|297621667|ref|YP_003709804.1|	-	0.00038	20.4	0.1	1.9	8.4	0.0	3.1	3	0	0	3	3	3	1	AAA	ATPase	domain
MobB	PF03205.9	gi|297621667|ref|YP_003709804.1|	-	0.00049	19.8	1.2	0.11	12.2	0.1	2.7	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_28	PF13521.1	gi|297621667|ref|YP_003709804.1|	-	0.0005	20.0	0.1	0.65	9.9	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|297621667|ref|YP_003709804.1|	-	0.00065	19.6	0.2	0.13	12.2	0.0	3.2	4	0	0	4	4	3	1	AAA	domain
AAA_18	PF13238.1	gi|297621667|ref|YP_003709804.1|	-	0.00067	19.9	0.1	0.51	10.6	0.0	3.0	2	0	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|297621667|ref|YP_003709804.1|	-	0.0012	18.3	0.2	0.42	10.0	0.0	2.7	2	0	0	2	2	2	1	AAA-like	domain
Arch_ATPase	PF01637.13	gi|297621667|ref|YP_003709804.1|	-	0.0015	18.2	1.3	0.61	9.7	0.0	2.7	3	0	0	3	3	3	1	Archaeal	ATPase
AAA_33	PF13671.1	gi|297621667|ref|YP_003709804.1|	-	0.0059	16.4	0.3	5.3	6.9	0.0	3.2	3	0	0	3	3	3	0	AAA	domain
AAA_19	PF13245.1	gi|297621667|ref|YP_003709804.1|	-	0.0085	15.8	0.1	5.4	6.8	0.0	2.5	2	0	0	2	2	2	0	Part	of	AAA	domain
Dynamin_N	PF00350.18	gi|297621667|ref|YP_003709804.1|	-	0.0089	15.8	0.5	4.6	7.0	0.0	3.0	3	0	0	3	3	3	0	Dynamin	family
KAP_NTPase	PF07693.9	gi|297621667|ref|YP_003709804.1|	-	0.015	14.3	0.0	0.83	8.5	0.0	2.1	2	0	0	2	2	2	0	KAP	family	P-loop	domain
AAA_30	PF13604.1	gi|297621667|ref|YP_003709804.1|	-	0.022	14.3	0.0	3	7.3	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
PduV-EutP	PF10662.4	gi|297621667|ref|YP_003709804.1|	-	0.038	13.4	3.2	2.8	7.4	0.1	3.0	3	0	0	3	3	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
T2SE	PF00437.15	gi|297621667|ref|YP_003709804.1|	-	0.049	12.5	1.0	5.2	5.8	0.0	2.6	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
UPF0079	PF02367.12	gi|297621667|ref|YP_003709804.1|	-	0.05	13.2	0.1	1.3	8.6	0.0	2.3	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
DLIC	PF05783.6	gi|297621667|ref|YP_003709804.1|	-	0.052	12.2	0.3	0.21	10.1	0.0	2.0	2	0	0	2	2	2	0	Dynein	light	intermediate	chain	(DLIC)
DAP3	PF10236.4	gi|297621667|ref|YP_003709804.1|	-	0.055	12.4	0.0	0.15	10.9	0.0	1.7	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
SbcCD_C	PF13558.1	gi|297621667|ref|YP_003709804.1|	-	0.062	13.2	0.3	9.4	6.2	0.0	3.2	2	1	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
Rad17	PF03215.10	gi|297621667|ref|YP_003709804.1|	-	0.064	11.9	0.0	0.26	9.9	0.0	1.8	2	0	0	2	2	2	0	Rad17	cell	cycle	checkpoint	protein
NB-ARC	PF00931.17	gi|297621667|ref|YP_003709804.1|	-	0.072	11.9	3.2	3.7	6.3	0.1	2.6	2	1	0	2	2	2	0	NB-ARC	domain
cobW	PF02492.14	gi|297621667|ref|YP_003709804.1|	-	0.087	12.2	1.7	3.5	7.0	0.0	2.4	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_25	PF13481.1	gi|297621667|ref|YP_003709804.1|	-	0.1	11.9	0.0	6.7	6.0	0.0	2.8	3	0	0	3	3	2	0	AAA	domain
AAA_5	PF07728.9	gi|297621667|ref|YP_003709804.1|	-	0.11	12.2	1.1	13	5.5	0.1	2.5	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
SRP54	PF00448.17	gi|297621667|ref|YP_003709804.1|	-	0.22	10.9	1.7	0.56	9.6	0.2	2.2	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_13	PF13166.1	gi|297621667|ref|YP_003709804.1|	-	0.26	9.7	3.5	8.8	4.6	0.0	2.9	3	0	0	3	3	3	0	AAA	domain
SpoU_methylase	PF00588.14	gi|297621668|ref|YP_003709805.1|	-	7.9e-28	97.1	0.0	1.1e-27	96.6	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
GTP_cyclohydroI	PF01227.17	gi|297621669|ref|YP_003709806.1|	-	3.8e-60	202.2	0.0	4.5e-60	202.0	0.0	1.0	1	0	0	1	1	1	1	GTP	cyclohydrolase	I
QueF	PF14489.1	gi|297621669|ref|YP_003709806.1|	-	0.0054	16.6	0.1	0.024	14.5	0.0	2.1	2	0	0	2	2	2	1	QueF-like	protein
AA_kinase	PF00696.23	gi|297621670|ref|YP_003709807.1|	-	3.3e-45	154.5	3.0	4.6e-45	154.0	2.1	1.2	1	0	0	1	1	1	1	Amino	acid	kinase	family
PUA	PF01472.15	gi|297621670|ref|YP_003709807.1|	-	1e-18	66.7	0.2	2.5e-18	65.5	0.1	1.7	1	0	0	1	1	1	1	PUA	domain
DUF3290	PF11694.3	gi|297621670|ref|YP_003709807.1|	-	0.043	13.5	0.8	5.8	6.6	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3290)
Aldedh	PF00171.17	gi|297621671|ref|YP_003709808.1|	-	6.5e-19	67.6	0.0	1.3e-13	50.1	0.0	2.1	2	0	0	2	2	2	2	Aldehyde	dehydrogenase	family
DUF1487	PF07368.6	gi|297621671|ref|YP_003709808.1|	-	0.027	13.6	0.1	0.049	12.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1487)
Lge1	PF11488.3	gi|297621671|ref|YP_003709808.1|	-	0.25	11.5	2.4	0.68	10.1	1.7	1.7	1	0	0	1	1	1	0	Transcriptional	regulatory	protein	LGE1
P5CR_dimer	PF14748.1	gi|297621672|ref|YP_003709809.1|	-	2.9e-30	104.4	0.1	7.2e-30	103.1	0.0	1.7	2	0	0	2	2	2	1	Pyrroline-5-carboxylate	reductase	dimerisation
F420_oxidored	PF03807.12	gi|297621672|ref|YP_003709809.1|	-	2.6e-18	66.2	0.0	5.8e-18	65.1	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.10	gi|297621672|ref|YP_003709809.1|	-	3.6e-08	33.3	0.0	5.9e-08	32.7	0.0	1.3	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|297621672|ref|YP_003709809.1|	-	2.1e-05	24.3	0.2	0.00018	21.2	0.2	2.3	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
TrkA_N	PF02254.13	gi|297621672|ref|YP_003709809.1|	-	4.1e-05	23.5	0.1	0.00048	20.0	0.0	2.2	1	1	1	2	2	2	1	TrkA-N	domain
Saccharop_dh	PF03435.13	gi|297621672|ref|YP_003709809.1|	-	5.7e-05	22.2	0.1	8.5e-05	21.6	0.0	1.2	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
GFO_IDH_MocA	PF01408.17	gi|297621672|ref|YP_003709809.1|	-	0.00011	22.7	0.0	0.0015	19.0	0.0	2.2	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
ApbA	PF02558.11	gi|297621672|ref|YP_003709809.1|	-	0.00057	19.3	0.3	0.0039	16.6	0.1	2.2	1	1	1	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
Shikimate_DH	PF01488.15	gi|297621672|ref|YP_003709809.1|	-	0.00091	19.3	0.1	0.0015	18.6	0.0	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
PDH	PF02153.12	gi|297621672|ref|YP_003709809.1|	-	0.0014	17.6	0.0	0.0019	17.1	0.0	1.2	1	0	0	1	1	1	1	Prephenate	dehydrogenase
Tubulin	PF00091.20	gi|297621672|ref|YP_003709809.1|	-	0.025	14.4	0.0	0.037	13.8	0.0	1.2	1	0	0	1	1	1	0	Tubulin/FtsZ	family,	GTPase	domain
DapB_N	PF01113.15	gi|297621672|ref|YP_003709809.1|	-	0.041	13.8	0.0	0.075	12.9	0.0	1.5	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
UDPG_MGDP_dh_N	PF03721.9	gi|297621672|ref|YP_003709809.1|	-	0.11	11.8	0.2	2.8	7.2	0.0	2.3	1	1	1	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Ferrochelatase	PF00762.14	gi|297621673|ref|YP_003709810.1|	-	1.3e-95	320.0	0.0	1.8e-95	319.5	0.0	1.2	1	0	0	1	1	1	1	Ferrochelatase
CbiX	PF01903.12	gi|297621673|ref|YP_003709810.1|	-	0.0035	17.4	0.0	0.64	10.1	0.0	2.6	2	1	1	3	3	3	2	CbiX
DUF164	PF02591.10	gi|297621674|ref|YP_003709811.1|	-	3e-16	58.9	1.5	8.6e-16	57.5	1.1	1.8	1	0	0	1	1	1	1	Putative	zinc	ribbon	domain
Lebercilin	PF15619.1	gi|297621674|ref|YP_003709811.1|	-	0.00072	19.0	19.4	0.0011	18.4	13.5	1.2	1	0	0	1	1	1	1	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
ATG16	PF08614.6	gi|297621674|ref|YP_003709811.1|	-	0.01	15.6	25.0	0.072	12.9	8.9	2.2	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
Fib_alpha	PF08702.5	gi|297621674|ref|YP_003709811.1|	-	0.013	15.6	5.2	0.013	15.6	3.6	2.9	1	1	3	4	4	4	0	Fibrinogen	alpha/beta	chain	family
IncA	PF04156.9	gi|297621674|ref|YP_003709811.1|	-	0.014	15.0	25.7	0.32	10.5	10.6	2.1	1	1	1	2	2	2	0	IncA	protein
AAA_13	PF13166.1	gi|297621674|ref|YP_003709811.1|	-	0.1	11.0	18.8	0.67	8.3	4.5	2.0	1	1	1	2	2	2	0	AAA	domain
TEX13	PF15186.1	gi|297621674|ref|YP_003709811.1|	-	0.77	9.3	8.2	0.57	9.7	4.2	1.8	1	1	0	1	1	1	0	Testis-expressed	sequence	13	protein	family
COG5	PF10392.4	gi|297621674|ref|YP_003709811.1|	-	1	9.2	11.8	1.2	9.1	1.6	2.2	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
DUF3573	PF12097.3	gi|297621674|ref|YP_003709811.1|	-	1.2	7.6	5.4	1.1	7.7	2.6	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3573)
Jnk-SapK_ap_N	PF09744.4	gi|297621674|ref|YP_003709811.1|	-	1.4	8.8	23.8	0.73	9.8	5.3	2.3	1	1	1	2	2	2	0	JNK_SAPK-associated	protein-1
Lys-AminoMut_A	PF09043.6	gi|297621674|ref|YP_003709811.1|	-	1.7	6.6	5.7	1.1	7.2	1.5	1.9	1	1	1	2	2	2	0	D-Lysine	5,6-aminomutase	alpha	subunit
Spc7	PF08317.6	gi|297621674|ref|YP_003709811.1|	-	2.1	6.9	21.5	2	6.9	14.0	1.6	1	1	0	1	1	1	0	Spc7	kinetochore	protein
TBPIP	PF07106.8	gi|297621674|ref|YP_003709811.1|	-	2.7	7.5	23.6	0.83	9.1	6.6	2.2	1	1	1	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
UPF0449	PF15136.1	gi|297621674|ref|YP_003709811.1|	-	3	8.1	7.6	3.7	7.8	2.1	3.0	3	1	0	3	3	2	0	Uncharacterised	protein	family	UPF0449
DUF972	PF06156.8	gi|297621674|ref|YP_003709811.1|	-	3	8.2	15.6	1	9.7	2.0	2.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
V_ATPase_I	PF01496.14	gi|297621674|ref|YP_003709811.1|	-	3.1	5.5	17.6	2	6.1	6.3	2.0	1	1	1	2	2	2	0	V-type	ATPase	116kDa	subunit	family
DUF1664	PF07889.7	gi|297621674|ref|YP_003709811.1|	-	3.3	7.5	14.8	3.4	7.4	1.9	2.3	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
FlxA	PF14282.1	gi|297621674|ref|YP_003709811.1|	-	3.7	7.5	17.7	0.31	10.9	4.5	2.5	1	1	1	2	2	2	0	FlxA-like	protein
DUF2730	PF10805.3	gi|297621674|ref|YP_003709811.1|	-	4.6	7.0	11.6	0.99	9.1	1.7	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2730)
DUF3450	PF11932.3	gi|297621674|ref|YP_003709811.1|	-	5.3	6.2	13.1	2.1	7.5	5.6	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
NPV_P10	PF05531.7	gi|297621674|ref|YP_003709811.1|	-	5.6	7.2	8.6	5.9	7.2	0.1	3.2	1	1	2	3	3	3	0	Nucleopolyhedrovirus	P10	protein
Nsp1_C	PF05064.8	gi|297621674|ref|YP_003709811.1|	-	6.3	6.4	13.7	4.7	6.8	4.3	2.8	1	1	2	3	3	3	0	Nsp1-like	C-terminal	region
DUF4600	PF15372.1	gi|297621674|ref|YP_003709811.1|	-	6.5	6.9	18.5	5.9e+02	0.6	12.8	2.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4600)
CENP-Q	PF13094.1	gi|297621674|ref|YP_003709811.1|	-	7.2	6.6	21.3	2.2	8.2	8.1	2.3	1	1	1	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
LMBR1	PF04791.11	gi|297621674|ref|YP_003709811.1|	-	9.3	4.7	6.5	7.7	4.9	3.8	1.3	1	1	0	1	1	1	0	LMBR1-like	membrane	protein
APG6	PF04111.7	gi|297621674|ref|YP_003709811.1|	-	9.8	5.1	20.9	5.3	5.9	11.4	2.1	1	1	1	2	2	2	0	Autophagy	protein	Apg6
SHMT	PF00464.14	gi|297621675|ref|YP_003709812.1|	-	7.2e-127	423.0	2.3	1.8e-96	322.9	0.2	2.5	2	1	0	2	2	2	2	Serine	hydroxymethyltransferase
Beta_elim_lyase	PF01212.16	gi|297621675|ref|YP_003709812.1|	-	5.8e-06	25.6	0.0	6.5e-05	22.2	0.0	2.0	1	1	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_1_2	PF00155.16	gi|297621675|ref|YP_003709812.1|	-	9.3e-05	21.5	0.0	0.00021	20.3	0.0	1.6	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
SelA	PF03841.8	gi|297621675|ref|YP_003709812.1|	-	0.039	12.6	0.0	0.12	11.0	0.0	1.8	2	0	0	2	2	2	0	L-seryl-tRNA	selenium	transferase
CLP_protease	PF00574.18	gi|297621676|ref|YP_003709813.1|	-	8.8e-66	221.0	0.1	1e-65	220.8	0.0	1.0	1	0	0	1	1	1	1	Clp	protease
ECH	PF00378.15	gi|297621676|ref|YP_003709813.1|	-	0.016	14.3	0.1	2.6	7.1	0.1	2.2	2	0	0	2	2	2	0	Enoyl-CoA	hydratase/isomerase	family
DAP_epimerase	PF01678.14	gi|297621677|ref|YP_003709814.1|	-	2.8e-45	153.1	0.0	3.8e-29	101.0	0.0	2.0	2	0	0	2	2	2	2	Diaminopimelate	epimerase
UPF0158	PF03682.8	gi|297621678|ref|YP_003709815.1|	-	4e-78	260.6	12.8	7.1e-78	259.8	8.9	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0158)
DUF2570	PF10828.3	gi|297621678|ref|YP_003709815.1|	-	0.016	14.8	1.1	0.046	13.3	0.7	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2570)
DUF2786	PF10979.3	gi|297621678|ref|YP_003709815.1|	-	0.072	12.8	2.1	0.29	10.8	0.2	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2786)
RF-1	PF00472.15	gi|297621679|ref|YP_003709816.1|	-	1.9e-24	85.6	9.4	4.1e-24	84.5	6.5	1.6	1	1	0	1	1	1	1	RF-1	domain
DUF4579	PF15158.1	gi|297621679|ref|YP_003709816.1|	-	0.089	12.2	0.2	0.11	11.9	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4579)
Histone_HNS	PF00816.16	gi|297621679|ref|YP_003709816.1|	-	0.12	12.8	7.2	2.4	8.7	0.0	2.4	2	0	0	2	2	2	0	H-NS	histone	family
Glyco_hydro_4C	PF11975.3	gi|297621679|ref|YP_003709816.1|	-	0.18	11.6	4.6	0.18	11.5	3.2	1.2	1	0	0	1	1	1	0	Family	4	glycosyl	hydrolase	C-terminal	domain
FhuF_C	PF11575.3	gi|297621680|ref|YP_003709817.1|	-	1.2	8.8	4.0	3.6	7.3	0.3	2.4	2	0	0	2	2	2	0	FhuF	2Fe-2S	C-terminal	domain
MscL	PF01741.13	gi|297621682|ref|YP_003709819.1|	-	1.9e-39	134.7	1.3	2.2e-39	134.5	0.9	1.0	1	0	0	1	1	1	1	Large-conductance	mechanosensitive	channel,	MscL
UPF0547	PF10571.4	gi|297621682|ref|YP_003709819.1|	-	0.00075	19.1	5.5	0.0014	18.2	3.8	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
DZR	PF12773.2	gi|297621682|ref|YP_003709819.1|	-	0.0011	18.7	2.7	0.0016	18.1	1.9	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|297621682|ref|YP_003709819.1|	-	0.0024	17.3	3.6	0.0035	16.7	2.5	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|297621682|ref|YP_003709819.1|	-	0.0037	16.4	1.5	0.0055	15.8	1.1	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
CRT-like	PF08627.5	gi|297621682|ref|YP_003709819.1|	-	0.013	15.3	0.2	0.038	13.9	0.0	1.7	2	0	0	2	2	2	0	CRT-like
FtsX	PF02687.16	gi|297621682|ref|YP_003709819.1|	-	0.018	14.7	0.2	0.025	14.3	0.1	1.3	1	0	0	1	1	1	0	FtsX-like	permease	family
SUD-M	PF11633.3	gi|297621682|ref|YP_003709819.1|	-	0.048	12.9	0.1	0.13	11.5	0.0	1.6	1	1	1	2	2	2	0	Single-stranded	poly(A)	binding	domain
Aminotran_5	PF00266.14	gi|297621683|ref|YP_003709820.1|	-	1.2e-39	136.1	0.0	1.3e-39	135.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
PALP	PF00291.20	gi|297621684|ref|YP_003709821.1|	-	6.1e-73	245.7	0.1	6.8e-73	245.5	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
TauD	PF02668.11	gi|297621685|ref|YP_003709822.1|	-	1.3e-39	136.4	0.1	1.6e-39	136.1	0.1	1.0	1	0	0	1	1	1	1	Taurine	catabolism	dioxygenase	TauD,	TfdA	family
DegS	PF05384.6	gi|297621685|ref|YP_003709822.1|	-	0.021	14.0	1.3	0.035	13.3	0.9	1.3	1	0	0	1	1	1	0	Sensor	protein	DegS
Fer4_12	PF13353.1	gi|297621685|ref|YP_003709822.1|	-	0.069	13.2	0.1	2.2	8.4	0.1	2.3	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
DUF3310	PF11753.3	gi|297621685|ref|YP_003709822.1|	-	0.29	11.1	3.0	3.1	7.8	0.4	2.5	2	0	0	2	2	2	0	Protein	of	unknwon	function	(DUF3310)
adh_short	PF00106.20	gi|297621686|ref|YP_003709823.1|	-	5.6e-22	78.4	0.0	8.7e-22	77.8	0.0	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|297621686|ref|YP_003709823.1|	-	8.7e-11	42.0	0.0	1.2e-10	41.6	0.0	1.2	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|297621686|ref|YP_003709823.1|	-	2.4e-10	40.3	0.0	3.9e-10	39.6	0.0	1.3	1	0	0	1	1	1	1	KR	domain
Eno-Rase_NADH_b	PF12242.3	gi|297621686|ref|YP_003709823.1|	-	0.0011	18.6	0.1	0.0023	17.6	0.1	1.5	1	0	0	1	1	1	1	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
PHA-1	PF06542.6	gi|297621686|ref|YP_003709823.1|	-	0.0037	16.0	0.0	0.0052	15.5	0.0	1.2	1	0	0	1	1	1	1	Regulator	protein	PHA-1
ATP_bind_2	PF03668.10	gi|297621686|ref|YP_003709823.1|	-	0.012	14.6	0.0	0.017	14.1	0.0	1.2	1	0	0	1	1	1	0	P-loop	ATPase	protein	family
Epimerase	PF01370.16	gi|297621686|ref|YP_003709823.1|	-	0.012	15.0	0.1	0.015	14.7	0.1	1.3	1	1	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
NAD_binding_2	PF03446.10	gi|297621686|ref|YP_003709823.1|	-	0.049	13.4	0.0	0.098	12.4	0.0	1.4	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
THF_DHG_CYH_C	PF02882.14	gi|297621686|ref|YP_003709823.1|	-	0.1	11.6	0.1	0.31	10.0	0.0	1.8	2	0	0	2	2	2	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
2-Hacid_dh_C	PF02826.14	gi|297621686|ref|YP_003709823.1|	-	0.14	11.2	0.1	0.23	10.6	0.0	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
MatE	PF01554.13	gi|297621687|ref|YP_003709824.1|	-	3.1e-29	101.6	31.2	5.4e-15	55.3	8.0	3.2	2	1	0	2	2	2	2	MatE
Polysacc_synt_C	PF14667.1	gi|297621687|ref|YP_003709824.1|	-	2.7e-08	33.7	10.6	2.7e-08	33.7	7.3	4.2	3	2	2	5	5	5	1	Polysaccharide	biosynthesis	C-terminal	domain
Thiolase_C	PF02803.13	gi|297621689|ref|YP_003709826.1|	-	6.8e-12	44.8	1.0	1.9e-11	43.4	0.0	1.9	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|297621689|ref|YP_003709826.1|	-	0.00011	21.3	0.0	0.00057	18.9	0.0	1.9	2	0	0	2	2	2	1	Thiolase,	N-terminal	domain
ketoacyl-synt	PF00109.21	gi|297621689|ref|YP_003709826.1|	-	0.00068	19.1	2.3	0.0033	16.9	0.8	2.4	2	1	0	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
Phage_HK97_TLTM	PF06120.6	gi|297621689|ref|YP_003709826.1|	-	0.091	12.0	0.1	0.13	11.5	0.1	1.2	1	0	0	1	1	1	0	Tail	length	tape	measure	protein
3HCDH_N	PF02737.13	gi|297621690|ref|YP_003709827.1|	-	9.6e-34	116.5	0.4	3.8e-31	108.1	0.0	2.3	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|297621690|ref|YP_003709827.1|	-	1.4e-09	38.1	0.1	7.5e-09	35.8	0.0	2.3	2	1	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
ECH	PF00378.15	gi|297621691|ref|YP_003709828.1|	-	9.4e-68	227.9	1.5	1.1e-67	227.7	1.1	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
PEP_mutase	PF13714.1	gi|297621692|ref|YP_003709829.1|	-	1.9e-48	164.8	0.0	2.3e-48	164.5	0.0	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
ICL	PF00463.16	gi|297621692|ref|YP_003709829.1|	-	4.5e-11	41.6	0.1	6.6e-11	41.1	0.0	1.2	1	0	0	1	1	1	1	Isocitrate	lyase	family
FTCD	PF02971.9	gi|297621692|ref|YP_003709829.1|	-	0.0025	17.4	0.0	0.29	10.7	0.0	2.5	2	1	0	2	2	2	1	Formiminotransferase	domain
Pantoate_transf	PF02548.10	gi|297621692|ref|YP_003709829.1|	-	0.11	11.5	0.0	0.7	8.9	0.0	2.2	1	1	0	1	1	1	0	Ketopantoate	hydroxymethyltransferase
Citrate_synt	PF00285.16	gi|297621693|ref|YP_003709830.1|	-	4.2e-120	400.7	0.0	4.7e-120	400.5	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
MmgE_PrpD	PF03972.9	gi|297621694|ref|YP_003709831.1|	-	5.3e-149	496.1	0.0	6.4e-149	495.9	0.0	1.0	1	0	0	1	1	1	1	MmgE/PrpD	family
MFS_1	PF07690.11	gi|297621695|ref|YP_003709832.1|	-	4.4e-56	190.1	44.5	4.4e-56	190.1	30.9	1.6	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|297621695|ref|YP_003709832.1|	-	3.1e-07	28.9	7.3	3.1e-07	28.9	5.1	2.3	2	0	0	2	2	2	2	Transmembrane	secretion	effector
MFS_2	PF13347.1	gi|297621695|ref|YP_003709832.1|	-	0.0017	16.8	41.6	0.014	13.8	0.3	3.7	1	1	2	3	3	3	3	MFS/sugar	transport	protein
RE_HindVP	PF09519.5	gi|297621695|ref|YP_003709832.1|	-	0.027	13.3	0.2	0.044	12.6	0.1	1.2	1	0	0	1	1	1	0	HindVP	restriction	endonuclease
Gp_dh_C	PF02800.15	gi|297621697|ref|YP_003709834.1|	-	2.6e-69	231.6	0.0	3.9e-69	231.0	0.0	1.3	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
Gp_dh_N	PF00044.19	gi|297621697|ref|YP_003709834.1|	-	1.9e-59	199.9	0.0	2.8e-59	199.4	0.0	1.2	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|297621697|ref|YP_003709834.1|	-	0.008	16.0	0.0	0.032	14.1	0.0	2.1	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Ribosomal_L17	PF01196.14	gi|297621698|ref|YP_003709835.1|	-	2.2e-33	114.6	0.3	2.9e-33	114.2	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L17
PARG_cat	PF05028.9	gi|297621698|ref|YP_003709835.1|	-	0.088	12.0	0.1	0.1	11.8	0.1	1.1	1	0	0	1	1	1	0	Poly	(ADP-ribose)	glycohydrolase	(PARG)
RNA_pol_A_CTD	PF03118.10	gi|297621699|ref|YP_003709836.1|	-	3.5e-24	84.0	1.1	8.9e-24	82.7	0.8	1.7	1	0	0	1	1	1	1	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
RNA_pol_L	PF01193.19	gi|297621699|ref|YP_003709836.1|	-	2.1e-14	52.3	0.0	3.7e-14	51.6	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_A_bac	PF01000.21	gi|297621699|ref|YP_003709836.1|	-	3.5e-08	33.5	0.1	8e-08	32.4	0.1	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/RpoA	insert	domain
Ribosomal_S11	PF00411.14	gi|297621700|ref|YP_003709837.1|	-	2.6e-42	143.4	1.8	2.6e-42	143.4	1.3	1.3	2	0	0	2	2	2	1	Ribosomal	protein	S11
DUF3988	PF13149.1	gi|297621700|ref|YP_003709837.1|	-	0.11	11.9	1.4	0.14	11.6	1.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3988)
PrpR_N	PF06506.6	gi|297621700|ref|YP_003709837.1|	-	0.22	10.9	1.6	4.8	6.5	0.0	2.5	3	0	0	3	3	3	0	Propionate	catabolism	activator
Ribosomal_S13	PF00416.17	gi|297621701|ref|YP_003709838.1|	-	2.4e-39	134.0	0.4	2.8e-39	133.8	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
FbpA	PF05833.6	gi|297621701|ref|YP_003709838.1|	-	0.01	14.4	0.0	0.012	14.1	0.0	1.2	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
H2TH	PF06831.9	gi|297621701|ref|YP_003709838.1|	-	0.041	13.6	0.0	0.058	13.1	0.0	1.3	1	0	0	1	1	1	0	Formamidopyrimidine-DNA	glycosylase	H2TH	domain
SecY	PF00344.15	gi|297621702|ref|YP_003709839.1|	-	4.6e-106	354.6	31.4	6e-106	354.2	21.8	1.1	1	0	0	1	1	1	1	SecY	translocase
Gate	PF07670.9	gi|297621702|ref|YP_003709839.1|	-	0.16	11.8	11.7	0.59	10.0	4.0	3.5	2	2	0	2	2	2	0	Nucleoside	recognition
Ninjurin	PF04923.7	gi|297621702|ref|YP_003709839.1|	-	0.96	9.2	7.8	1.4	8.6	0.2	3.4	3	1	0	3	3	3	0	Ninjurin
Ribosomal_L18e	PF00828.14	gi|297621703|ref|YP_003709840.1|	-	2.5e-19	69.9	0.4	3.9e-19	69.3	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
Ribosomal_S5_C	PF03719.10	gi|297621704|ref|YP_003709841.1|	-	1.7e-29	100.8	0.2	3.2e-29	100.0	0.1	1.5	2	0	0	2	2	2	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_S5	PF00333.15	gi|297621704|ref|YP_003709841.1|	-	3.7e-25	87.4	0.2	5.9e-25	86.8	0.2	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_L18p	PF00861.17	gi|297621705|ref|YP_003709842.1|	-	6.2e-33	113.5	2.8	7e-33	113.3	1.9	1.0	1	0	0	1	1	1	1	Ribosomal	L18p/L5e	family
Ribosomal_L6	PF00347.18	gi|297621706|ref|YP_003709843.1|	-	4.8e-33	113.4	6.6	1.1e-17	64.3	0.1	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
Ribosomal_S8	PF00410.14	gi|297621707|ref|YP_003709844.1|	-	2e-43	147.3	0.0	2.2e-43	147.1	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8
Ribosomal_L5_C	PF00673.16	gi|297621708|ref|YP_003709845.1|	-	2.7e-32	110.3	0.0	4.5e-32	109.6	0.0	1.3	1	0	0	1	1	1	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.14	gi|297621708|ref|YP_003709845.1|	-	1.4e-21	76.0	0.7	2.2e-21	75.3	0.5	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L5
KOW	PF00467.24	gi|297621709|ref|YP_003709846.1|	-	0.00071	19.2	3.3	0.00081	19.0	1.1	2.0	2	0	0	2	2	2	1	KOW	motif
YajC	PF02699.10	gi|297621709|ref|YP_003709846.1|	-	0.077	12.6	2.6	0.14	11.8	1.8	1.5	1	0	0	1	1	1	0	Preprotein	translocase	subunit
Ribosomal_L14	PF00238.14	gi|297621710|ref|YP_003709847.1|	-	1.3e-50	170.2	0.5	1.4e-50	170.1	0.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
Ribosomal_S17	PF00366.15	gi|297621711|ref|YP_003709848.1|	-	3.2e-28	97.5	2.8	3.8e-28	97.3	1.9	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
DUF4566	PF15130.1	gi|297621711|ref|YP_003709848.1|	-	0.072	12.2	0.0	0.084	12.0	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4566)
Ribosomal_L29	PF00831.18	gi|297621712|ref|YP_003709849.1|	-	3.4e-16	58.6	8.4	3.9e-16	58.4	5.8	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
ERCC4	PF02732.10	gi|297621712|ref|YP_003709849.1|	-	0.022	14.5	0.3	0.024	14.4	0.2	1.1	1	0	0	1	1	1	0	ERCC4	domain
NDK	PF00334.14	gi|297621712|ref|YP_003709849.1|	-	0.12	12.2	1.2	0.13	12.0	0.9	1.1	1	0	0	1	1	1	0	Nucleoside	diphosphate	kinase
Herpes_BLRF2	PF05812.7	gi|297621712|ref|YP_003709849.1|	-	0.17	11.6	5.0	0.19	11.5	3.5	1.1	1	0	0	1	1	1	0	Herpesvirus	BLRF2	protein
DUF2482	PF10655.4	gi|297621712|ref|YP_003709849.1|	-	0.24	11.4	2.1	0.3	11.1	1.0	1.5	1	1	0	1	1	1	0	Hypothetical	protein	of	unknown	function	(DUF2482)
Ribosomal_L16	PF00252.13	gi|297621713|ref|YP_003709850.1|	-	1.2e-50	170.7	1.0	1.3e-50	170.5	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
Ribosomal_S3_C	PF00189.15	gi|297621714|ref|YP_003709851.1|	-	1.1e-33	115.2	0.2	2.4e-33	114.1	0.1	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.12	gi|297621714|ref|YP_003709851.1|	-	4.4e-17	61.4	3.2	8.7e-17	60.4	2.2	1.5	1	0	0	1	1	1	1	KH	domain
KH_4	PF13083.1	gi|297621714|ref|YP_003709851.1|	-	0.00013	21.5	0.2	0.00027	20.5	0.2	1.5	1	0	0	1	1	1	1	KH	domain
Ribosomal_L22	PF00237.14	gi|297621715|ref|YP_003709852.1|	-	3e-31	107.4	0.2	3.5e-31	107.2	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Jag_N	PF14804.1	gi|297621715|ref|YP_003709852.1|	-	0.049	13.6	0.3	0.11	12.5	0.2	1.5	1	0	0	1	1	1	0	Jag	N-terminus
Ribosomal_S19	PF00203.16	gi|297621716|ref|YP_003709853.1|	-	6.2e-35	118.6	0.5	6.9e-35	118.5	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19
Ribosomal_L2_C	PF03947.13	gi|297621717|ref|YP_003709854.1|	-	1.8e-48	163.6	0.9	2.9e-48	162.9	0.6	1.3	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.18	gi|297621717|ref|YP_003709854.1|	-	4.4e-37	125.9	0.5	2.9e-36	123.2	0.6	2.1	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_L23	PF00276.15	gi|297621718|ref|YP_003709855.1|	-	2.6e-18	65.7	3.9	3.2e-17	62.2	2.7	2.0	1	1	0	1	1	1	1	Ribosomal	protein	L23
Ribosomal_L4	PF00573.17	gi|297621719|ref|YP_003709856.1|	-	1.1e-52	178.2	3.7	1.3e-52	178.0	2.6	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Ribosomal_L3	PF00297.17	gi|297621720|ref|YP_003709857.1|	-	2.2e-36	125.6	8.7	1.5e-34	119.5	6.1	2.1	1	1	0	1	1	1	1	Ribosomal	protein	L3
SLBB	PF10531.4	gi|297621721|ref|YP_003709858.1|	-	3.7e-07	29.9	0.1	5.8e-07	29.3	0.1	1.3	1	0	0	1	1	1	1	SLBB	domain
Bacillus_HBL	PF05791.6	gi|297621722|ref|YP_003709859.1|	-	0.00092	18.6	3.0	0.0021	17.4	2.1	1.6	1	0	0	1	1	1	1	Bacillus	haemolytic	enterotoxin	(HBL)
IncA	PF04156.9	gi|297621722|ref|YP_003709859.1|	-	0.0096	15.5	0.3	0.0096	15.5	0.2	2.1	2	1	0	2	2	2	1	IncA	protein
CH	PF00307.26	gi|297621722|ref|YP_003709859.1|	-	0.1	12.6	0.0	0.28	11.2	0.0	1.7	2	0	0	2	2	2	0	Calponin	homology	(CH)	domain
cwf21	PF08312.7	gi|297621722|ref|YP_003709859.1|	-	0.12	12.2	0.4	0.12	12.2	0.3	1.9	2	0	0	2	2	2	0	cwf21	domain
YrhK	PF14145.1	gi|297621724|ref|YP_003709861.1|	-	1.1	8.9	5.4	2.5	7.8	3.6	1.8	1	1	0	1	1	1	0	YrhK-like	protein
Formyl_trans_N	PF00551.14	gi|297621725|ref|YP_003709862.1|	-	1.4e-44	151.8	0.0	1.7e-44	151.5	0.0	1.1	1	0	0	1	1	1	1	Formyl	transferase
Formyl_trans_C	PF02911.13	gi|297621725|ref|YP_003709862.1|	-	4.2e-24	84.5	0.0	7e-24	83.8	0.0	1.4	1	0	0	1	1	1	1	Formyl	transferase,	C-terminal	domain
Hexapep	PF00132.19	gi|297621726|ref|YP_003709863.1|	-	4.5e-28	95.4	20.0	3e-10	39.1	1.6	5.8	3	2	2	6	6	6	6	Bacterial	transferase	hexapeptide	(six	repeats)
Acetyltransf_11	PF13720.1	gi|297621726|ref|YP_003709863.1|	-	1.2e-24	86.3	0.0	2.3e-24	85.3	0.0	1.5	1	0	0	1	1	1	1	Udp	N-acetylglucosamine	O-acyltransferase;	Domain	2
Hexapep_2	PF14602.1	gi|297621726|ref|YP_003709863.1|	-	2.4e-07	30.2	9.9	0.022	14.2	0.0	5.2	2	2	2	4	4	4	4	Hexapeptide	repeat	of	succinyl-transferase
Bactofilin	PF04519.8	gi|297621726|ref|YP_003709863.1|	-	0.025	14.5	1.0	1	9.3	0.1	2.5	2	0	0	2	2	2	0	Polymer-forming	cytoskeletal
FabA	PF07977.8	gi|297621727|ref|YP_003709864.1|	-	2.8e-34	117.5	0.0	3.3e-34	117.3	0.0	1.1	1	0	0	1	1	1	1	FabA-like	domain
4HBT	PF03061.17	gi|297621727|ref|YP_003709864.1|	-	0.0087	16.1	0.0	0.013	15.6	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
AfsA	PF03756.8	gi|297621727|ref|YP_003709864.1|	-	0.01	15.5	0.0	0.017	14.8	0.0	1.4	1	1	0	1	1	1	0	A-factor	biosynthesis	hotdog	domain
MaoC_dehydratas	PF01575.14	gi|297621727|ref|YP_003709864.1|	-	0.029	13.7	0.0	0.039	13.3	0.0	1.2	1	0	0	1	1	1	0	MaoC	like	domain
DUF1667	PF07892.6	gi|297621727|ref|YP_003709864.1|	-	0.075	12.7	0.0	16	5.3	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1667)
CTDII	PF01556.13	gi|297621727|ref|YP_003709864.1|	-	0.076	12.9	0.2	0.18	11.6	0.1	1.8	1	1	0	1	1	1	0	DnaJ	C	terminal	domain
LpxC	PF03331.8	gi|297621728|ref|YP_003709865.1|	-	3.6e-89	298.3	0.1	4.5e-89	298.0	0.0	1.0	1	0	0	1	1	1	1	UDP-3-O-acyl	N-acetylglycosamine	deacetylase
CN_hydrolase	PF00795.17	gi|297621729|ref|YP_003709866.1|	-	1.3e-12	47.4	0.0	2.3e-12	46.6	0.0	1.4	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
TruB_C	PF09142.6	gi|297621729|ref|YP_003709866.1|	-	0.013	15.0	0.0	0.034	13.7	0.0	1.6	1	0	0	1	1	1	0	tRNA	Pseudouridine	synthase	II,	C	terminal
CesT	PF05932.8	gi|297621730|ref|YP_003709867.1|	-	9.9e-13	47.9	0.1	1.2e-12	47.7	0.1	1.1	1	0	0	1	1	1	1	Tir	chaperone	protein	(CesT)	family
Tbf5	PF06331.7	gi|297621730|ref|YP_003709867.1|	-	0.043	13.6	0.6	1.1	9.1	0.0	2.3	2	0	0	2	2	2	0	Transcription	factor	TFIIH	complex	subunit	Tfb5
DUF4318	PF14201.1	gi|297621730|ref|YP_003709867.1|	-	0.063	13.1	0.1	0.14	12.0	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4318)
Herpes_BTRF1	PF04682.7	gi|297621730|ref|YP_003709867.1|	-	0.12	11.7	1.4	1.9	7.7	1.0	2.0	2	0	0	2	2	2	0	Herpesvirus	BTRF1	protein	conserved	region
DUF294_C	PF10335.4	gi|297621731|ref|YP_003709868.1|	-	6.1e-12	45.4	0.0	1.3e-11	44.3	0.0	1.5	1	0	0	1	1	1	1	Putative	nucleotidyltransferase	substrate	binding	domain
DUF294	PF03445.8	gi|297621731|ref|YP_003709868.1|	-	4.9e-09	35.9	0.0	1.1e-08	34.8	0.0	1.5	1	0	0	1	1	1	1	Putative	nucleotidyltransferase	DUF294
GlnE	PF03710.10	gi|297621731|ref|YP_003709868.1|	-	5.9e-05	22.4	0.0	0.00015	21.1	0.0	1.6	1	0	0	1	1	1	1	Glutamate-ammonia	ligase	adenylyltransferase
NTP_transf_2	PF01909.18	gi|297621731|ref|YP_003709868.1|	-	0.0011	19.1	0.0	0.0027	17.9	0.0	1.6	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
TFIIA_gamma_N	PF02268.11	gi|297621731|ref|YP_003709868.1|	-	0.033	13.7	0.1	0.14	11.8	0.0	2.0	2	0	0	2	2	2	0	Transcription	initiation	factor	IIA,	gamma	subunit,	helical	domain
Exo_endo_phos	PF03372.18	gi|297621732|ref|YP_003709869.1|	-	1.3e-10	41.7	0.0	1.5e-10	41.4	0.0	1.1	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Nol1_Nop2_Fmu	PF01189.12	gi|297621733|ref|YP_003709870.1|	-	3.3e-39	134.9	0.0	2.1e-38	132.3	0.0	2.0	1	1	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|297621733|ref|YP_003709870.1|	-	2e-14	53.4	0.0	3.5e-14	52.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|297621733|ref|YP_003709870.1|	-	1.6e-09	37.3	0.0	2.6e-09	36.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.13	gi|297621733|ref|YP_003709870.1|	-	7.4e-09	35.0	0.0	1.4e-08	34.1	0.0	1.5	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_18	PF12847.2	gi|297621733|ref|YP_003709870.1|	-	2.9e-08	34.2	0.0	4.9e-08	33.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297621733|ref|YP_003709870.1|	-	2e-07	31.0	0.0	3.3e-07	30.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297621733|ref|YP_003709870.1|	-	0.00016	21.9	0.0	0.0003	21.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|297621733|ref|YP_003709870.1|	-	0.00017	20.7	0.0	0.001	18.1	0.0	2.0	2	0	0	2	2	2	1	O-methyltransferase
PCMT	PF01135.14	gi|297621733|ref|YP_003709870.1|	-	0.00026	20.5	0.0	0.00044	19.8	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_11	PF08241.7	gi|297621733|ref|YP_003709870.1|	-	0.032	14.7	0.0	0.2	12.1	0.0	2.1	2	0	0	2	2	2	0	Methyltransferase	domain
UPF0020	PF01170.13	gi|297621733|ref|YP_003709870.1|	-	0.042	13.4	0.0	0.073	12.6	0.0	1.3	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
SurA_N_3	PF13624.1	gi|297621734|ref|YP_003709871.1|	-	8.7e-09	35.5	0.1	2.9e-08	33.8	0.1	1.7	1	1	0	1	1	1	1	SurA	N-terminal	domain
Rotamase_2	PF13145.1	gi|297621734|ref|YP_003709871.1|	-	0.0012	19.4	0.0	0.0033	18.0	0.0	1.8	2	0	0	2	2	2	1	PPIC-type	PPIASE	domain
SurA_N_2	PF13623.1	gi|297621734|ref|YP_003709871.1|	-	0.0015	18.5	0.0	0.0029	17.6	0.0	1.5	1	0	0	1	1	1	1	SurA	N-terminal	domain
RrnaAD	PF00398.15	gi|297621735|ref|YP_003709872.1|	-	3.3e-56	190.2	0.0	4.2e-56	189.8	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_26	PF13659.1	gi|297621735|ref|YP_003709872.1|	-	0.00017	21.5	0.0	0.00025	21.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297621735|ref|YP_003709872.1|	-	0.00074	20.0	0.0	0.0014	19.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297621735|ref|YP_003709872.1|	-	0.001	18.8	0.0	0.0017	18.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
TrkA_N	PF02254.13	gi|297621735|ref|YP_003709872.1|	-	0.013	15.4	0.1	0.022	14.7	0.0	1.3	1	0	0	1	1	1	0	TrkA-N	domain
Methyltransf_11	PF08241.7	gi|297621735|ref|YP_003709872.1|	-	0.044	14.2	0.0	0.089	13.2	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
NodS	PF05401.6	gi|297621735|ref|YP_003709872.1|	-	0.087	12.1	0.0	0.15	11.4	0.0	1.3	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
Methyltransf_25	PF13649.1	gi|297621735|ref|YP_003709872.1|	-	0.12	12.7	0.0	0.21	11.9	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Peptidase_S11	PF00768.15	gi|297621737|ref|YP_003709874.1|	-	3.2e-50	170.6	1.0	5.5e-50	169.8	0.7	1.3	1	0	0	1	1	1	1	D-alanyl-D-alanine	carboxypeptidase
Beta-lactamase2	PF13354.1	gi|297621737|ref|YP_003709874.1|	-	1.2e-09	37.9	0.3	1.9e-09	37.2	0.2	1.3	1	0	0	1	1	1	1	Beta-lactamase	enzyme	family
PBP5_C	PF07943.8	gi|297621737|ref|YP_003709874.1|	-	0.0023	17.8	0.1	0.0076	16.2	0.1	1.9	1	0	0	1	1	1	1	Penicillin-binding	protein	5,	C-terminal	domain
Peptidase_S13	PF02113.10	gi|297621737|ref|YP_003709874.1|	-	0.0039	15.7	0.0	0.0069	14.9	0.0	1.3	1	0	0	1	1	1	1	D-Ala-D-Ala	carboxypeptidase	3	(S13)	family
DUF4351	PF14261.1	gi|297621738|ref|YP_003709875.1|	-	0.037	13.8	0.5	0.082	12.7	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4351)
LptE	PF04390.7	gi|297621739|ref|YP_003709876.1|	-	5.7e-09	35.8	0.0	8.3e-09	35.3	0.0	1.2	1	0	0	1	1	1	1	Lipopolysaccharide-assembly
TPR_6	PF13174.1	gi|297621740|ref|YP_003709877.1|	-	9.9e-13	47.6	0.0	0.07	13.6	0.0	5.8	5	0	0	5	5	5	3	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297621740|ref|YP_003709877.1|	-	1.8e-10	39.9	1.3	0.25	11.3	0.0	5.6	6	0	0	6	6	6	3	Tetratricopeptide	repeat
YfiO	PF13525.1	gi|297621740|ref|YP_003709877.1|	-	1.5e-09	37.6	9.7	0.002	17.6	0.1	3.1	2	1	1	3	3	3	3	Outer	membrane	lipoprotein
TPR_16	PF13432.1	gi|297621740|ref|YP_003709877.1|	-	2.7e-09	37.4	0.0	0.025	15.2	0.0	3.7	3	1	1	4	4	4	4	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|297621740|ref|YP_003709877.1|	-	3.6e-09	36.1	1.3	0.016	14.8	0.1	3.6	3	1	0	3	3	3	3	TPR	repeat
TPR_1	PF00515.23	gi|297621740|ref|YP_003709877.1|	-	1.3e-07	30.8	5.0	0.37	10.4	0.0	4.6	6	0	0	6	6	6	3	Tetratricopeptide	repeat
TPR_18	PF13512.1	gi|297621740|ref|YP_003709877.1|	-	1.4e-05	25.1	0.8	0.011	15.7	0.0	2.5	2	1	1	3	3	3	3	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297621740|ref|YP_003709877.1|	-	3.5e-05	23.6	3.5	0.22	11.4	0.3	3.8	3	1	0	3	3	3	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|297621740|ref|YP_003709877.1|	-	3.5e-05	24.0	0.1	0.34	11.6	0.0	4.1	4	1	1	5	5	5	2	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297621740|ref|YP_003709877.1|	-	0.00033	20.2	1.3	7.3	6.6	0.1	4.4	5	0	0	5	5	5	2	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|297621740|ref|YP_003709877.1|	-	0.079	12.7	0.2	2.4	8.1	0.0	3.1	4	0	0	4	4	4	0	Tetratricopeptide	repeat
Sel1	PF08238.7	gi|297621740|ref|YP_003709877.1|	-	8.8	7.1	7.2	8.3	7.2	0.1	3.9	4	1	1	5	5	5	0	Sel1	repeat
DNA_pol3_alpha	PF07733.7	gi|297621741|ref|YP_003709878.1|	-	1.2e-165	551.1	0.0	1.5e-165	550.7	0.0	1.1	1	0	0	1	1	1	1	Bacterial	DNA	polymerase	III	alpha	subunit
PHP	PF02811.14	gi|297621741|ref|YP_003709878.1|	-	1.3e-46	158.5	0.0	8.6e-45	152.6	0.0	3.5	2	1	0	3	3	3	1	PHP	domain
HHH_6	PF14579.1	gi|297621741|ref|YP_003709878.1|	-	4e-22	78.0	0.0	2.5e-21	75.5	0.0	2.3	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_3	PF12836.2	gi|297621741|ref|YP_003709878.1|	-	0.00015	21.6	0.1	0.00058	19.7	0.0	2.1	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
SpoVAE	PF14097.1	gi|297621741|ref|YP_003709878.1|	-	0.11	11.8	0.0	0.21	10.9	0.0	1.3	1	0	0	1	1	1	0	Stage	V	sporulation	protein	AE1
MFS_1	PF07690.11	gi|297621742|ref|YP_003709879.1|	-	2.9e-46	157.8	41.5	5.8e-46	156.8	24.2	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|297621742|ref|YP_003709879.1|	-	1.5e-05	23.8	31.1	0.0029	16.2	7.7	2.4	2	1	0	2	2	2	2	Sugar	(and	other)	transporter
DUF1228	PF06779.9	gi|297621742|ref|YP_003709879.1|	-	0.00013	21.9	0.5	0.00013	21.9	0.4	3.2	3	0	0	3	3	3	2	Protein	of	unknown	function	(DUF1228)
tRNA-synt_His	PF13393.1	gi|297621744|ref|YP_003709881.1|	-	5e-45	153.8	0.0	7.9e-45	153.2	0.0	1.3	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.20	gi|297621744|ref|YP_003709881.1|	-	1.6e-30	105.9	0.2	3.3e-30	104.9	0.1	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|297621744|ref|YP_003709881.1|	-	7e-13	48.3	0.0	4.9e-12	45.6	0.0	2.3	2	0	0	2	2	2	1	Anticodon	binding	domain
tRNA-synt_2	PF00152.15	gi|297621744|ref|YP_003709881.1|	-	2.7e-05	23.0	0.7	0.37	9.5	0.1	3.2	3	0	0	3	3	3	3	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2d	PF01409.15	gi|297621744|ref|YP_003709881.1|	-	0.00021	20.5	0.0	0.0036	16.5	0.0	2.3	2	0	0	2	2	2	1	tRNA	synthetases	class	II	core	domain	(F)
PGM_PMM_IV	PF00408.15	gi|297621744|ref|YP_003709881.1|	-	0.029	14.3	0.0	0.073	13.0	0.0	1.7	1	0	0	1	1	1	0	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
tRNA-synt_2	PF00152.15	gi|297621745|ref|YP_003709882.1|	-	2.4e-128	427.6	0.1	2.9e-128	427.3	0.0	1.0	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
GAD	PF02938.9	gi|297621745|ref|YP_003709882.1|	-	8.2e-26	90.0	0.2	2e-25	88.7	0.1	1.7	2	0	0	2	2	2	1	GAD	domain
tRNA_anti-codon	PF01336.20	gi|297621745|ref|YP_003709882.1|	-	1.3e-15	57.0	0.0	3e-15	55.8	0.0	1.7	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|297621745|ref|YP_003709882.1|	-	7.7e-06	25.2	0.0	0.045	12.9	0.0	3.2	3	0	0	3	3	3	2	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2b	PF00587.20	gi|297621745|ref|YP_003709882.1|	-	1.4e-05	24.7	0.2	0.0011	18.5	0.0	2.4	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Npa1	PF11707.3	gi|297621745|ref|YP_003709882.1|	-	0.18	10.7	0.2	0.28	10.1	0.1	1.2	1	0	0	1	1	1	0	Ribosome	60S	biogenesis	N-terminal
FKBP_C	PF00254.23	gi|297621747|ref|YP_003709884.1|	-	1e-20	73.5	0.0	2e-20	72.6	0.0	1.4	1	0	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
FKBP_N	PF01346.13	gi|297621747|ref|YP_003709884.1|	-	1.5e-14	54.0	0.1	2.6e-14	53.3	0.0	1.4	1	0	0	1	1	1	1	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
SpoU_methylase	PF00588.14	gi|297621748|ref|YP_003709885.1|	-	1e-30	106.5	0.0	1.1e-30	106.3	0.0	1.0	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Thioredoxin	PF00085.15	gi|297621749|ref|YP_003709886.1|	-	3.1e-30	103.9	0.0	3.4e-30	103.7	0.0	1.0	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|297621749|ref|YP_003709886.1|	-	3.9e-09	36.7	0.0	7.6e-08	32.5	0.0	2.0	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|297621749|ref|YP_003709886.1|	-	8.6e-07	29.0	0.0	0.0014	18.7	0.0	2.3	1	1	1	2	2	2	2	Thioredoxin-like
Thioredoxin_3	PF13192.1	gi|297621749|ref|YP_003709886.1|	-	3.6e-05	23.4	0.1	4.9e-05	23.0	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin	domain
HyaE	PF07449.6	gi|297621749|ref|YP_003709886.1|	-	8.2e-05	22.4	0.0	0.00011	22.0	0.0	1.2	1	0	0	1	1	1	1	Hydrogenase-1	expression	protein	HyaE
Thioredoxin_9	PF14595.1	gi|297621749|ref|YP_003709886.1|	-	0.00096	18.7	0.0	0.0015	18.0	0.0	1.3	1	1	0	1	1	1	1	Thioredoxin
AhpC-TSA	PF00578.16	gi|297621749|ref|YP_003709886.1|	-	0.0036	16.9	0.0	0.0043	16.7	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Thioredoxin_7	PF13899.1	gi|297621749|ref|YP_003709886.1|	-	0.0074	16.2	0.0	0.012	15.6	0.0	1.4	1	1	0	1	1	1	1	Thioredoxin-like
Redoxin	PF08534.5	gi|297621749|ref|YP_003709886.1|	-	0.0079	15.7	0.0	0.097	12.2	0.0	1.9	1	1	1	2	2	2	1	Redoxin
Phosducin	PF02114.11	gi|297621749|ref|YP_003709886.1|	-	0.01	14.6	0.0	0.012	14.3	0.0	1.1	1	0	0	1	1	1	1	Phosducin
DIM1	PF02966.11	gi|297621749|ref|YP_003709886.1|	-	0.019	14.4	0.0	0.021	14.3	0.0	1.1	1	0	0	1	1	1	0	Mitosis	protein	DIM1
DUF953	PF06110.6	gi|297621749|ref|YP_003709886.1|	-	0.025	14.0	0.2	0.25	10.7	0.1	2.0	1	1	0	1	1	1	0	Eukaryotic	protein	of	unknown	function	(DUF953)
TraF	PF13728.1	gi|297621749|ref|YP_003709886.1|	-	0.045	13.2	0.0	0.13	11.7	0.0	1.7	1	1	0	1	1	1	0	F	plasmid	transfer	operon	protein
Thioredoxin_5	PF13743.1	gi|297621749|ref|YP_003709886.1|	-	0.066	12.7	0.2	0.81	9.2	0.0	2.0	1	1	1	2	2	2	0	Thioredoxin
PTPlike_phytase	PF14566.1	gi|297621750|ref|YP_003709887.1|	-	1.4e-34	119.2	0.0	2.8e-34	118.3	0.0	1.5	1	0	0	1	1	1	1	Inositol	hexakisphosphate
Y_phosphatase3	PF13350.1	gi|297621750|ref|YP_003709887.1|	-	0.00049	20.3	0.1	0.0011	19.2	0.0	1.6	2	0	0	2	2	2	1	Tyrosine	phosphatase	family
Y_phosphatase	PF00102.22	gi|297621750|ref|YP_003709887.1|	-	0.00067	19.0	0.7	0.0026	17.1	0.5	1.9	1	1	0	1	1	1	1	Protein-tyrosine	phosphatase
Rhodanese	PF00581.15	gi|297621751|ref|YP_003709888.1|	-	5.6e-10	39.5	0.0	1e-09	38.7	0.0	1.5	1	0	0	1	1	1	1	Rhodanese-like	domain
DUF116	PF01976.12	gi|297621753|ref|YP_003709890.1|	-	0.00013	21.5	0.1	0.00019	20.9	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF116
Rad54_N	PF08658.5	gi|297621756|ref|YP_003709893.1|	-	0.049	13.3	0.1	0.082	12.6	0.1	1.3	1	0	0	1	1	1	0	Rad54	N	terminal
3HCDH	PF00725.17	gi|297621757|ref|YP_003709894.1|	-	0.00072	19.9	0.0	0.00078	19.7	0.0	1.1	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
Vac_Fusion	PF02346.11	gi|297621757|ref|YP_003709894.1|	-	0.0049	16.2	0.3	0.0073	15.7	0.2	1.3	1	0	0	1	1	1	1	Chordopoxvirus	fusion	protein
DUF1335	PF07056.6	gi|297621757|ref|YP_003709894.1|	-	0.026	14.2	0.0	0.069	12.8	0.0	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1335)
BLOC1_2	PF10046.4	gi|297621757|ref|YP_003709894.1|	-	0.05	13.7	0.3	0.08	13.0	0.2	1.3	1	0	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
AF0941-like	PF14591.1	gi|297621757|ref|YP_003709894.1|	-	0.073	13.1	1.5	0.081	12.9	1.0	1.3	1	1	0	1	1	1	0	AF0941-like
Prefoldin_2	PF01920.15	gi|297621757|ref|YP_003709894.1|	-	0.091	12.5	1.5	0.14	11.9	1.0	1.3	1	0	0	1	1	1	0	Prefoldin	subunit
Cep57_MT_bd	PF06657.8	gi|297621757|ref|YP_003709894.1|	-	0.16	11.9	1.5	0.33	10.9	0.4	1.7	2	0	0	2	2	2	0	Centrosome	microtubule-binding	domain	of	Cep57
DUF1464	PF07318.7	gi|297621759|ref|YP_003709896.1|	-	0.007	15.2	0.0	0.01	14.6	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1464)
MORN	PF02493.15	gi|297621759|ref|YP_003709896.1|	-	0.015	14.9	1.1	0.76	9.6	0.1	3.8	3	0	0	3	3	3	0	MORN	repeat
MORN_2	PF07661.8	gi|297621759|ref|YP_003709896.1|	-	0.023	14.6	10.4	0.2	11.7	0.0	5.9	6	2	1	7	7	7	0	MORN	repeat	variant
B3_4	PF03483.12	gi|297621760|ref|YP_003709897.1|	-	2.4e-66	222.4	0.0	4.5e-66	221.6	0.0	1.5	1	0	0	1	1	1	1	B3/4	domain
tRNA_bind	PF01588.15	gi|297621760|ref|YP_003709897.1|	-	4.4e-22	77.7	0.1	8.7e-22	76.7	0.0	1.5	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
FDX-ACB	PF03147.9	gi|297621760|ref|YP_003709897.1|	-	8.2e-22	77.1	0.4	1.6e-21	76.2	0.3	1.5	1	0	0	1	1	1	1	Ferredoxin-fold	anticodon	binding	domain
B5	PF03484.10	gi|297621760|ref|YP_003709897.1|	-	3.4e-19	68.4	0.0	2.7e-18	65.5	0.0	2.4	2	0	0	2	2	2	1	tRNA	synthetase	B5	domain
NDK	PF00334.14	gi|297621761|ref|YP_003709898.1|	-	2.1e-58	195.8	0.0	2.4e-58	195.7	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
GATase	PF00117.23	gi|297621762|ref|YP_003709899.1|	-	4e-55	186.2	0.0	4.4e-55	186.1	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|297621762|ref|YP_003709899.1|	-	6.6e-13	48.6	0.0	9.7e-13	48.0	0.0	1.2	1	0	0	1	1	1	1	Peptidase	C26
SNO	PF01174.14	gi|297621762|ref|YP_003709899.1|	-	0.0067	16.0	0.3	0.043	13.4	0.0	2.2	2	1	0	2	2	2	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.9	gi|297621762|ref|YP_003709899.1|	-	0.13	11.7	0.0	0.25	10.9	0.0	1.4	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
NDK	PF00334.14	gi|297621763|ref|YP_003709900.1|	-	1.2e-55	187.0	0.5	1.3e-55	186.8	0.4	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
DDE_Tnp_IS1	PF03400.8	gi|297621764|ref|YP_003709901.1|	-	8.9e-12	45.2	0.1	1.7e-11	44.3	0.1	1.6	1	1	0	1	1	1	1	IS1	transposase
Zn_Tnp_IS1	PF03811.8	gi|297621764|ref|YP_003709901.1|	-	4.1e-05	22.9	3.7	6.3e-05	22.3	2.6	1.3	1	0	0	1	1	1	1	InsA	N-terminal	domain
DDE_Tnp_IS240	PF13610.1	gi|297621764|ref|YP_003709901.1|	-	0.00041	20.3	0.0	0.00094	19.1	0.0	1.6	2	0	0	2	2	2	1	DDE	domain
DUF2387	PF09526.5	gi|297621764|ref|YP_003709901.1|	-	0.062	13.2	0.4	0.14	12.1	0.3	1.5	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
DNA_ligase_ZBD	PF03119.11	gi|297621764|ref|YP_003709901.1|	-	0.2	11.4	2.6	0.19	11.4	0.3	2.0	1	1	1	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-ISL3	PF14690.1	gi|297621764|ref|YP_003709901.1|	-	0.23	11.5	4.5	0.58	10.2	0.3	2.8	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Rad50_zn_hook	PF04423.9	gi|297621764|ref|YP_003709901.1|	-	0.53	9.8	2.7	0.56	9.7	0.2	2.5	2	1	0	2	2	2	0	Rad50	zinc	hook	motif
zf-H2C2_2	PF13465.1	gi|297621764|ref|YP_003709901.1|	-	0.94	9.8	3.6	2.6	8.5	0.1	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
DDE_Tnp_IS1	PF03400.8	gi|297621765|ref|YP_003709902.1|	-	2e-07	31.1	0.1	2e-07	31.1	0.1	1.1	1	0	0	1	1	1	1	IS1	transposase
rve_3	PF13683.1	gi|297621765|ref|YP_003709902.1|	-	0.0012	18.3	0.1	0.0016	17.9	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
ABC_tran	PF00005.22	gi|297621766|ref|YP_003709903.1|	-	2.2e-33	115.4	0.0	3.2e-33	114.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297621766|ref|YP_003709903.1|	-	3.9e-08	33.6	3.4	9.7e-06	25.7	0.2	2.1	2	0	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|297621766|ref|YP_003709903.1|	-	0.00023	20.4	0.3	0.0022	17.2	0.2	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
SbcCD_C	PF13558.1	gi|297621766|ref|YP_003709903.1|	-	0.0037	17.1	0.1	0.07	13.0	0.0	2.2	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_15	PF13175.1	gi|297621766|ref|YP_003709903.1|	-	0.014	14.5	0.2	0.048	12.7	0.1	1.8	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_29	PF13555.1	gi|297621766|ref|YP_003709903.1|	-	0.033	13.7	0.0	0.065	12.7	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|297621766|ref|YP_003709903.1|	-	0.11	12.7	2.7	0.14	12.4	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
AAA_14	PF13173.1	gi|297621766|ref|YP_003709903.1|	-	0.12	12.2	0.3	6.1	6.7	0.2	2.6	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|297621766|ref|YP_003709903.1|	-	0.7	10.0	2.9	9.6	6.3	2.0	2.2	1	1	0	1	1	1	0	AAA	domain
OstA_2	PF13100.1	gi|297621767|ref|YP_003709904.1|	-	0.0029	16.9	0.1	0.31	10.3	0.0	2.6	3	0	0	3	3	3	2	OstA-like	protein
Pertussis_S1	PF02917.9	gi|297621767|ref|YP_003709904.1|	-	0.07	12.6	0.1	0.13	11.8	0.1	1.3	1	0	0	1	1	1	0	Pertussis	toxin,	subunit	1
DAHP_synth_1	PF00793.15	gi|297621768|ref|YP_003709905.1|	-	8.9e-77	257.4	0.0	9.9e-77	257.2	0.0	1.0	1	0	0	1	1	1	1	DAHP	synthetase	I	family
NeuB	PF03102.9	gi|297621768|ref|YP_003709905.1|	-	0.078	12.1	0.0	0.51	9.4	0.0	2.1	2	1	0	2	2	2	0	NeuB	family
HPPK	PF01288.15	gi|297621769|ref|YP_003709906.1|	-	2e-36	124.5	0.0	2.6e-36	124.1	0.0	1.1	1	0	0	1	1	1	1	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase	(HPPK)
Not3	PF04065.10	gi|297621770|ref|YP_003709907.1|	-	0.011	15.0	0.1	0.013	14.8	0.1	1.1	1	0	0	1	1	1	0	Not1	N-terminal	domain,	CCR4-Not	complex	component
Prefoldin_2	PF01920.15	gi|297621770|ref|YP_003709907.1|	-	0.013	15.2	0.1	1.9	8.3	0.0	2.1	2	0	0	2	2	2	0	Prefoldin	subunit
FlxA	PF14282.1	gi|297621770|ref|YP_003709907.1|	-	0.099	12.6	1.1	0.29	11.1	0.8	1.7	1	1	0	1	1	1	0	FlxA-like	protein
DUF607	PF04678.8	gi|297621770|ref|YP_003709907.1|	-	0.25	11.2	1.1	0.5	10.2	0.8	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF607
KH_4	PF13083.1	gi|297621771|ref|YP_003709908.1|	-	6.4e-21	73.7	2.0	7.5e-21	73.5	1.4	1.1	1	0	0	1	1	1	1	KH	domain
KH_1	PF00013.24	gi|297621771|ref|YP_003709908.1|	-	2.4e-06	27.1	1.2	4.7e-06	26.1	0.9	1.5	1	0	0	1	1	1	1	KH	domain
KH_2	PF07650.12	gi|297621771|ref|YP_003709908.1|	-	5.5e-05	22.6	1.9	6.7e-05	22.3	1.3	1.3	1	0	0	1	1	1	1	KH	domain
KH_3	PF13014.1	gi|297621771|ref|YP_003709908.1|	-	0.00021	20.8	1.4	0.00049	19.6	1.0	1.6	1	0	0	1	1	1	1	KH	domain
KH_5	PF13184.1	gi|297621771|ref|YP_003709908.1|	-	0.044	13.5	1.0	0.056	13.2	0.4	1.6	1	1	0	1	1	1	0	NusA-like	KH	domain
Tyr_Deacylase	PF02580.11	gi|297621772|ref|YP_003709909.1|	-	2.6e-53	179.9	0.3	2.8e-53	179.7	0.2	1.0	1	0	0	1	1	1	1	D-Tyr-tRNA(Tyr)	deacylase
DUF288	PF03385.12	gi|297621773|ref|YP_003709910.1|	-	0.02	13.3	0.5	0.02	13.3	0.3	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF288
PseudoU_synth_2	PF00849.17	gi|297621774|ref|YP_003709911.1|	-	3.7e-34	117.9	0.1	5.4e-34	117.4	0.0	1.2	1	0	0	1	1	1	1	RNA	pseudouridylate	synthase
S4	PF01479.20	gi|297621774|ref|YP_003709911.1|	-	6.2e-06	25.5	0.1	1.6e-05	24.2	0.0	1.8	2	0	0	2	2	2	1	S4	domain
S4_2	PF13275.1	gi|297621774|ref|YP_003709911.1|	-	0.1	12.1	0.0	0.24	11.0	0.0	1.6	1	0	0	1	1	1	0	S4	domain
FKBP_N	PF01346.13	gi|297621776|ref|YP_003709913.1|	-	0.034	14.1	4.9	0.046	13.7	3.4	1.2	1	0	0	1	1	1	0	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
IFRD	PF05004.8	gi|297621776|ref|YP_003709913.1|	-	0.055	12.5	1.2	0.067	12.2	0.8	1.1	1	0	0	1	1	1	0	Interferon-related	developmental	regulator	(IFRD)
Receptor_IA-2	PF11548.3	gi|297621776|ref|YP_003709913.1|	-	0.096	12.6	0.7	0.17	11.8	0.3	1.5	1	1	0	1	1	1	0	Protein-tyrosine	phosphatase	receptor	IA-2
KMP11	PF03037.11	gi|297621776|ref|YP_003709913.1|	-	0.097	13.2	0.3	0.12	12.9	0.2	1.2	1	0	0	1	1	1	0	Kinetoplastid	membrane	protein	11
DUF935	PF06074.7	gi|297621776|ref|YP_003709913.1|	-	0.48	9.0	6.0	0.55	8.8	4.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF935)
RecX	PF02631.11	gi|297621777|ref|YP_003709914.1|	-	7.1e-26	90.8	0.3	1.8e-25	89.5	0.1	1.6	1	1	1	2	2	2	2	RecX	family
DNA_topoisoIV	PF00521.15	gi|297621778|ref|YP_003709915.1|	-	1e-121	406.7	0.3	1.3e-121	406.4	0.2	1.1	1	0	0	1	1	1	1	DNA	gyrase/topoisomerase	IV,	subunit	A
DNA_gyraseB	PF00204.20	gi|297621779|ref|YP_003709916.1|	-	1.7e-33	115.3	0.5	3.1e-33	114.4	0.4	1.4	1	0	0	1	1	1	1	DNA	gyrase	B
Toprim	PF01751.17	gi|297621779|ref|YP_003709916.1|	-	1.2e-16	60.4	1.9	2e-16	59.8	0.0	2.4	3	0	0	3	3	3	1	Toprim	domain
HATPase_c_3	PF13589.1	gi|297621779|ref|YP_003709916.1|	-	7.2e-11	41.8	0.2	1.5e-10	40.8	0.1	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
DNA_gyraseB_C	PF00986.16	gi|297621779|ref|YP_003709916.1|	-	6.3e-09	35.4	0.0	1.4e-08	34.3	0.0	1.6	1	0	0	1	1	1	1	DNA	gyrase	B	subunit,	carboxyl	terminus
HATPase_c	PF02518.21	gi|297621779|ref|YP_003709916.1|	-	8.7e-06	25.4	0.2	1.8e-05	24.4	0.1	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Polysacc_synt_2	PF02719.10	gi|297621780|ref|YP_003709917.1|	-	9.4e-98	326.7	0.0	1.1e-97	326.4	0.0	1.0	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
Epimerase	PF01370.16	gi|297621780|ref|YP_003709917.1|	-	3.9e-19	69.0	0.0	6.1e-18	65.1	0.0	2.0	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|297621780|ref|YP_003709917.1|	-	1.5e-17	63.2	0.0	2.1e-17	62.7	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.12	gi|297621780|ref|YP_003709917.1|	-	3.6e-11	42.5	0.0	3.6e-09	35.9	0.0	2.9	2	1	0	2	2	2	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.7	gi|297621780|ref|YP_003709917.1|	-	6.4e-10	38.3	0.0	2e-09	36.7	0.0	1.8	1	1	1	2	2	2	1	Male	sterility	protein
adh_short	PF00106.20	gi|297621780|ref|YP_003709917.1|	-	3.9e-09	36.6	0.0	9.9e-09	35.3	0.0	1.6	2	0	0	2	2	2	1	short	chain	dehydrogenase
NAD_binding_10	PF13460.1	gi|297621780|ref|YP_003709917.1|	-	5.3e-06	26.5	0.0	8.4e-06	25.9	0.0	1.3	1	0	0	1	1	1	1	NADH(P)-binding
KR	PF08659.5	gi|297621780|ref|YP_003709917.1|	-	1.6e-05	24.6	0.0	0.00012	21.8	0.0	2.1	2	0	0	2	2	2	1	KR	domain
NmrA	PF05368.8	gi|297621780|ref|YP_003709917.1|	-	0.00028	20.2	0.0	0.00041	19.6	0.0	1.2	1	0	0	1	1	1	1	NmrA-like	family
Shikimate_DH	PF01488.15	gi|297621780|ref|YP_003709917.1|	-	0.00034	20.7	0.0	0.00068	19.7	0.0	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GlutR_N	PF05201.10	gi|297621781|ref|YP_003709918.1|	-	3.4e-37	127.3	0.1	1.6e-36	125.2	0.0	1.9	2	0	0	2	2	2	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
Shikimate_DH	PF01488.15	gi|297621781|ref|YP_003709918.1|	-	5.4e-18	65.3	0.0	9.4e-18	64.6	0.0	1.3	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
F420_oxidored	PF03807.12	gi|297621781|ref|YP_003709918.1|	-	0.0063	16.9	0.0	0.012	15.9	0.0	1.5	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Exo_endo_phos	PF03372.18	gi|297621782|ref|YP_003709919.1|	-	0.014	15.3	0.0	0.018	14.9	0.0	1.4	1	1	0	1	1	1	0	Endonuclease/Exonuclease/phosphatase	family
tRNA-synt_2	PF00152.15	gi|297621783|ref|YP_003709920.1|	-	3.7e-72	242.9	0.5	4.8e-72	242.5	0.3	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|297621783|ref|YP_003709920.1|	-	4.9e-14	51.9	0.1	9.5e-14	51.0	0.1	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|297621783|ref|YP_003709920.1|	-	0.00044	19.5	0.5	0.12	11.5	0.0	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2b	PF00587.20	gi|297621783|ref|YP_003709920.1|	-	0.027	14.0	0.1	1.8	8.0	0.1	2.3	2	0	0	2	2	2	0	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
AP_endonuc_2	PF01261.19	gi|297621784|ref|YP_003709921.1|	-	1.6e-31	109.2	0.0	2.1e-31	108.9	0.0	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
MVIN	PF03023.9	gi|297621785|ref|YP_003709922.1|	-	6.2e-94	314.9	26.2	7.7e-94	314.6	18.2	1.0	1	0	0	1	1	1	1	MviN-like	protein
Polysacc_synt_C	PF14667.1	gi|297621785|ref|YP_003709922.1|	-	0.0054	16.5	8.8	0.0054	16.5	6.1	3.4	2	1	1	3	3	3	2	Polysaccharide	biosynthesis	C-terminal	domain
HbrB	PF08539.6	gi|297621786|ref|YP_003709923.1|	-	0.016	15.0	0.3	0.049	13.4	0.2	1.8	1	0	0	1	1	1	0	HbrB-like
AAA_13	PF13166.1	gi|297621786|ref|YP_003709923.1|	-	0.018	13.5	7.4	0.027	12.9	5.1	1.1	1	0	0	1	1	1	0	AAA	domain
Ribosomal_S4	PF00163.14	gi|297621787|ref|YP_003709924.1|	-	2e-18	66.5	0.5	3.6e-18	65.7	0.4	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S4/S9	N-terminal	domain
S4	PF01479.20	gi|297621787|ref|YP_003709924.1|	-	2.6e-18	65.1	0.1	4.2e-18	64.5	0.1	1.4	1	0	0	1	1	1	1	S4	domain
S4_2	PF13275.1	gi|297621787|ref|YP_003709924.1|	-	0.0067	15.9	0.1	0.014	14.9	0.0	1.5	1	0	0	1	1	1	1	S4	domain
HisKA	PF00512.20	gi|297621788|ref|YP_003709925.1|	-	4e-08	33.1	0.1	7.1e-08	32.3	0.0	1.3	1	0	0	1	1	1	1	His	Kinase	A	(phospho-acceptor)	domain
HATPase_c	PF02518.21	gi|297621788|ref|YP_003709925.1|	-	6.8e-07	28.9	0.0	1.1e-06	28.3	0.0	1.3	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Pterin_bind	PF00809.17	gi|297621788|ref|YP_003709925.1|	-	0.0019	17.6	0.0	0.0026	17.1	0.0	1.2	1	0	0	1	1	1	1	Pterin	binding	enzyme
Sigma54_activat	PF00158.21	gi|297621789|ref|YP_003709926.1|	-	1.5e-70	235.9	0.4	4.1e-70	234.5	0.1	1.8	2	0	0	2	2	2	1	Sigma-54	interaction	domain
Response_reg	PF00072.19	gi|297621789|ref|YP_003709926.1|	-	2.7e-30	104.6	0.1	9e-30	102.9	0.0	2.0	3	0	0	3	3	1	1	Response	regulator	receiver	domain
Sigma54_activ_2	PF14532.1	gi|297621789|ref|YP_003709926.1|	-	3.6e-24	85.3	0.0	1.1e-23	83.8	0.0	1.8	1	0	0	1	1	1	1	Sigma-54	interaction	domain
HTH_8	PF02954.14	gi|297621789|ref|YP_003709926.1|	-	8e-15	54.1	0.4	8e-15	54.1	0.3	2.1	2	0	0	2	2	1	1	Bacterial	regulatory	protein,	Fis	family
AAA_5	PF07728.9	gi|297621789|ref|YP_003709926.1|	-	8.6e-08	32.0	0.0	1.8e-07	30.9	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|297621789|ref|YP_003709926.1|	-	1.7e-06	28.2	0.4	6.9e-06	26.2	0.0	2.3	3	0	0	3	3	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
HTH_30	PF13556.1	gi|297621789|ref|YP_003709926.1|	-	7.5e-05	22.2	0.1	0.00022	20.7	0.0	1.8	1	0	0	1	1	1	1	PucR	C-terminal	helix-turn-helix	domain
AAA_16	PF13191.1	gi|297621789|ref|YP_003709926.1|	-	0.00047	20.2	0.1	0.0017	18.3	0.1	2.1	1	1	0	1	1	1	1	AAA	ATPase	domain
HTH_23	PF13384.1	gi|297621789|ref|YP_003709926.1|	-	0.00054	19.5	0.0	0.0011	18.5	0.0	1.6	1	0	0	1	1	1	1	Homeodomain-like	domain
Mg_chelatase	PF01078.16	gi|297621789|ref|YP_003709926.1|	-	0.0017	17.5	0.2	0.098	11.8	0.1	2.3	1	1	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_3	PF07726.6	gi|297621789|ref|YP_003709926.1|	-	0.0032	17.0	0.3	0.014	14.9	0.0	2.2	3	0	0	3	3	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
HTH_28	PF13518.1	gi|297621789|ref|YP_003709926.1|	-	0.0036	17.2	0.0	0.0086	16.0	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
PhoH	PF02562.11	gi|297621789|ref|YP_003709926.1|	-	0.028	13.6	0.1	0.075	12.2	0.0	1.7	2	0	0	2	2	2	0	PhoH-like	protein
HTH_Tnp_ISL3	PF13542.1	gi|297621789|ref|YP_003709926.1|	-	0.03	13.5	0.0	0.085	12.0	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
ANF_receptor	PF01094.23	gi|297621789|ref|YP_003709926.1|	-	0.041	12.6	0.1	0.076	11.7	0.0	1.4	2	0	0	2	2	2	0	Receptor	family	ligand	binding	region
IstB_IS21	PF01695.12	gi|297621789|ref|YP_003709926.1|	-	0.053	12.9	0.0	0.091	12.1	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
Phage_CP76	PF06892.6	gi|297621789|ref|YP_003709926.1|	-	0.07	12.4	0.4	1.3	8.3	0.1	2.4	2	0	0	2	2	2	0	Phage	regulatory	protein	CII	(CP76)
APS_kinase	PF01583.15	gi|297621789|ref|YP_003709926.1|	-	0.085	12.5	0.0	0.16	11.6	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_18	PF13238.1	gi|297621789|ref|YP_003709926.1|	-	0.092	13.0	1.4	0.46	10.7	0.0	2.7	3	2	0	3	3	2	0	AAA	domain
AAA_22	PF13401.1	gi|297621789|ref|YP_003709926.1|	-	0.093	12.8	0.0	0.38	10.9	0.0	2.2	1	1	0	1	1	1	0	AAA	domain
DUF2075	PF09848.4	gi|297621789|ref|YP_003709926.1|	-	0.31	9.9	2.8	0.41	9.5	0.0	2.4	2	1	1	3	3	3	0	Uncharacterized	conserved	protein	(DUF2075)
BORG_CEP	PF14957.1	gi|297621790|ref|YP_003709927.1|	-	0.011	16.6	0.4	0.016	16.0	0.3	1.2	1	0	0	1	1	1	0	Cdc42	effector
DDE_3	PF13358.1	gi|297621791|ref|YP_003709928.1|	-	1.3e-28	99.5	0.0	2.2e-28	98.8	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.1	gi|297621791|ref|YP_003709928.1|	-	7.5e-19	67.0	0.1	1.9e-18	65.7	0.1	1.7	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_29	PF13551.1	gi|297621791|ref|YP_003709928.1|	-	9.9e-10	38.5	0.0	2.4e-09	37.3	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn	helix
rve	PF00665.21	gi|297621791|ref|YP_003709928.1|	-	4.3e-09	36.4	0.0	6.5e-08	32.7	0.0	2.3	2	0	0	2	2	2	1	Integrase	core	domain
HTH_23	PF13384.1	gi|297621791|ref|YP_003709928.1|	-	7.2e-07	28.6	0.0	2e-06	27.2	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|297621791|ref|YP_003709928.1|	-	2e-05	24.4	0.1	8.5e-05	22.4	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|297621791|ref|YP_003709928.1|	-	0.0003	20.1	0.0	0.00064	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
DDE_Tnp_ISAZ013	PF07592.6	gi|297621791|ref|YP_003709928.1|	-	0.0023	16.7	0.2	0.11	11.2	0.1	2.2	2	0	0	2	2	2	1	Rhodopirellula	transposase	DDE	domain
Terminase_5	PF06056.7	gi|297621791|ref|YP_003709928.1|	-	0.0027	17.2	0.0	0.0054	16.2	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
rve_3	PF13683.1	gi|297621791|ref|YP_003709928.1|	-	0.0039	16.6	0.0	0.013	14.9	0.0	1.9	2	0	0	2	2	1	1	Integrase	core	domain
Sigma70_r4	PF04545.11	gi|297621791|ref|YP_003709928.1|	-	0.012	14.9	0.0	0.034	13.4	0.0	1.8	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_40	PF14493.1	gi|297621791|ref|YP_003709928.1|	-	0.014	15.5	0.0	0.039	14.1	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_32	PF13565.1	gi|297621791|ref|YP_003709928.1|	-	0.032	15.0	1.9	5	7.9	0.0	3.5	2	1	2	4	4	3	0	Homeodomain-like	domain
HTH_38	PF13936.1	gi|297621791|ref|YP_003709928.1|	-	0.048	13.2	0.2	0.88	9.1	0.1	2.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|297621791|ref|YP_003709928.1|	-	0.065	12.8	0.0	0.16	11.6	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
GerE	PF00196.14	gi|297621791|ref|YP_003709928.1|	-	0.081	12.2	0.1	0.3	10.4	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.1	gi|297621791|ref|YP_003709928.1|	-	1.8	8.9	6.1	6	7.2	0.2	3.3	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
DUF4277	PF14104.1	gi|297621792|ref|YP_003709929.1|	-	1.1e-39	135.1	0.0	1.6e-39	134.6	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4277)
DUF4536	PF15055.1	gi|297621792|ref|YP_003709929.1|	-	0.067	13.2	0.3	0.12	12.5	0.2	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4536)
Ank_2	PF12796.2	gi|297621793|ref|YP_003709930.1|	-	5.8e-20	71.4	0.2	6.2e-09	36.0	0.0	3.0	1	1	1	2	2	2	2	Ankyrin	repeats	(3	copies)
Ank	PF00023.25	gi|297621793|ref|YP_003709930.1|	-	1.5e-18	65.5	3.5	3.4e-07	29.7	0.0	4.7	4	0	0	4	4	4	3	Ankyrin	repeat
Ank_5	PF13857.1	gi|297621793|ref|YP_003709930.1|	-	2e-17	62.8	5.9	1.4e-10	41.0	0.2	3.8	2	1	2	4	4	4	3	Ankyrin	repeats	(many	copies)
Ank_4	PF13637.1	gi|297621793|ref|YP_003709930.1|	-	2.3e-17	63.0	3.8	4.5e-09	36.5	0.1	4.1	3	1	1	4	4	4	2	Ankyrin	repeats	(many	copies)
Ank_3	PF13606.1	gi|297621793|ref|YP_003709930.1|	-	5.5e-16	57.0	3.1	0.0002	21.2	0.0	6.0	5	1	0	5	5	5	4	Ankyrin	repeat
DUF3618	PF12277.3	gi|297621793|ref|YP_003709930.1|	-	0.032	14.2	2.7	0.032	14.2	1.9	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3618)
GlnD_UR_UTase	PF08335.6	gi|297621795|ref|YP_003709932.1|	-	0.024	14.4	0.3	0.027	14.3	0.2	1.0	1	0	0	1	1	1	0	GlnD	PII-uridylyltransferase
PRP3	PF08572.5	gi|297621795|ref|YP_003709932.1|	-	0.065	12.6	0.6	0.066	12.5	0.4	1.0	1	0	0	1	1	1	0	pre-mRNA	processing	factor	3	(PRP3)
DDE_3	PF13358.1	gi|297621796|ref|YP_003709933.1|	-	7.9e-29	100.2	0.0	1.3e-28	99.6	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
HTH_33	PF13592.1	gi|297621796|ref|YP_003709933.1|	-	7.4e-19	67.0	0.1	1.9e-18	65.7	0.1	1.7	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_29	PF13551.1	gi|297621796|ref|YP_003709933.1|	-	9.3e-10	38.6	0.0	2.4e-09	37.3	0.0	1.7	2	0	0	2	2	1	1	Winged	helix-turn	helix
rve	PF00665.21	gi|297621796|ref|YP_003709933.1|	-	3.7e-09	36.7	0.0	5.6e-08	32.9	0.0	2.3	2	0	0	2	2	2	1	Integrase	core	domain
HTH_23	PF13384.1	gi|297621796|ref|YP_003709933.1|	-	7.2e-07	28.6	0.0	2e-06	27.2	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|297621796|ref|YP_003709933.1|	-	2.2e-05	24.3	0.1	8.5e-05	22.4	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|297621796|ref|YP_003709933.1|	-	0.0003	20.1	0.0	0.00064	19.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
DDE_Tnp_ISAZ013	PF07592.6	gi|297621796|ref|YP_003709933.1|	-	0.0023	16.7	0.2	0.11	11.2	0.1	2.2	2	0	0	2	2	2	1	Rhodopirellula	transposase	DDE	domain
Terminase_5	PF06056.7	gi|297621796|ref|YP_003709933.1|	-	0.0027	17.2	0.0	0.0054	16.2	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
rve_3	PF13683.1	gi|297621796|ref|YP_003709933.1|	-	0.0041	16.6	0.0	0.014	14.9	0.0	1.9	2	0	0	2	2	1	1	Integrase	core	domain
Sigma70_r4	PF04545.11	gi|297621796|ref|YP_003709933.1|	-	0.012	14.9	0.0	0.034	13.4	0.0	1.8	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_40	PF14493.1	gi|297621796|ref|YP_003709933.1|	-	0.015	15.5	0.0	0.039	14.1	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_32	PF13565.1	gi|297621796|ref|YP_003709933.1|	-	0.032	15.0	1.9	5	7.9	0.0	3.5	2	1	2	4	4	3	0	Homeodomain-like	domain
HTH_38	PF13936.1	gi|297621796|ref|YP_003709933.1|	-	0.048	13.2	0.2	0.88	9.1	0.1	2.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|297621796|ref|YP_003709933.1|	-	0.065	12.8	0.0	0.16	11.6	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
GerE	PF00196.14	gi|297621796|ref|YP_003709933.1|	-	0.081	12.2	0.1	0.3	10.4	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Phage_int_SAM_3	PF14659.1	gi|297621796|ref|YP_003709933.1|	-	1.8	8.9	6.1	6	7.2	0.2	3.3	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
MAF_flag10	PF01973.13	gi|297621797|ref|YP_003709934.1|	-	9.5e-38	129.3	0.0	2e-37	128.3	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
MAF_flag10	PF01973.13	gi|297621798|ref|YP_003709935.1|	-	2.5e-26	92.1	0.0	5.8e-26	91.0	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
MORN_2	PF07661.8	gi|297621798|ref|YP_003709935.1|	-	6.7e-17	59.4	9.7	0.33	11.1	0.0	8.7	9	0	0	9	9	9	7	MORN	repeat	variant
MORN	PF02493.15	gi|297621798|ref|YP_003709935.1|	-	0.95	9.3	8.0	9.8	6.1	0.2	4.4	4	0	0	4	4	4	0	MORN	repeat
MAF_flag10	PF01973.13	gi|297621799|ref|YP_003709936.1|	-	2.2e-31	108.6	0.0	4.7e-31	107.5	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
MORN_2	PF07661.8	gi|297621799|ref|YP_003709936.1|	-	4.4e-11	41.5	15.0	0.063	13.3	0.1	8.0	6	3	2	8	8	8	6	MORN	repeat	variant
DUF1975	PF09318.5	gi|297621799|ref|YP_003709936.1|	-	0.077	12.5	7.8	0.022	14.3	0.5	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1975)
DUF310	PF03750.8	gi|297621799|ref|YP_003709936.1|	-	1.6	8.9	6.7	0.44	10.7	0.2	2.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF310)
DUF3782	PF12644.2	gi|297621799|ref|YP_003709936.1|	-	4.3	7.1	6.4	1.2	8.9	0.3	3.2	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF3782)
B	PF02216.11	gi|297621800|ref|YP_003709937.1|	-	0.079	12.7	0.0	0.14	11.9	0.0	1.4	1	0	0	1	1	1	0	B	domain
ATP-synt_B	PF00430.13	gi|297621800|ref|YP_003709937.1|	-	0.88	9.3	9.1	0.35	10.6	4.0	1.8	2	0	0	2	2	2	0	ATP	synthase	B/B'	CF(0)
HSDR_N_2	PF13588.1	gi|297621801|ref|YP_003709938.1|	-	1e-15	57.4	0.0	1.2e-15	57.2	0.0	1.0	1	0	0	1	1	1	1	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
HSDR_N	PF04313.9	gi|297621801|ref|YP_003709938.1|	-	0.019	14.7	0.0	0.034	13.8	0.0	1.5	1	1	1	2	2	2	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
VRR_NUC	PF08774.6	gi|297621801|ref|YP_003709938.1|	-	0.12	12.4	0.0	0.14	12.2	0.0	1.2	1	0	0	1	1	1	0	VRR-NUC	domain
Ribosomal_S30AE	PF02482.14	gi|297621802|ref|YP_003709939.1|	-	2.5e-25	88.7	7.5	2.5e-25	88.7	5.2	1.7	2	0	0	2	2	2	1	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
DUF749	PF05370.6	gi|297621802|ref|YP_003709939.1|	-	0.024	14.5	0.8	0.024	14.5	0.6	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF749)
C2	PF00168.25	gi|297621802|ref|YP_003709939.1|	-	0.074	12.9	0.2	0.16	11.8	0.1	1.5	1	0	0	1	1	1	0	C2	domain
Allexi_40kDa	PF05549.6	gi|297621802|ref|YP_003709939.1|	-	0.14	11.4	1.1	0.17	11.1	0.8	1.2	1	0	0	1	1	1	0	Allexivirus	40kDa	protein
RecO_N	PF11967.3	gi|297621803|ref|YP_003709940.1|	-	2.9e-12	46.2	0.0	4.8e-12	45.5	0.0	1.4	1	0	0	1	1	1	1	Recombination	protein	O	N	terminal
RecO_C	PF02565.10	gi|297621803|ref|YP_003709940.1|	-	1.6e-07	31.1	0.2	2.2e-07	30.7	0.2	1.2	1	0	0	1	1	1	1	Recombination	protein	O	C	terminal
RecO_N_2	PF13114.1	gi|297621803|ref|YP_003709940.1|	-	0.033	13.9	0.0	0.058	13.1	0.0	1.5	1	0	0	1	1	1	0	RecO	N	terminal
DUF155	PF02582.9	gi|297621804|ref|YP_003709941.1|	-	3.2e-49	167.1	0.0	4.4e-49	166.7	0.0	1.2	1	0	0	1	1	1	1	Uncharacterised	ACR,	YagE	family	COG1723
SNARE	PF05739.14	gi|297621804|ref|YP_003709941.1|	-	0.092	12.4	1.2	1.2	8.8	0.3	2.3	2	0	0	2	2	2	0	SNARE	domain
Haemolytic	PF01809.13	gi|297621805|ref|YP_003709942.1|	-	2e-29	100.9	0.5	2.2e-29	100.8	0.3	1.0	1	0	0	1	1	1	1	Haemolytic	domain
Ribonuc_red_lgC	PF02867.10	gi|297621806|ref|YP_003709943.1|	-	3.9e-203	675.8	0.0	7.2e-203	674.9	0.0	1.4	2	0	0	2	2	2	1	Ribonucleotide	reductase,	barrel	domain
ATP-cone	PF03477.11	gi|297621806|ref|YP_003709943.1|	-	2.8e-25	88.5	6.6	4.2e-18	65.5	1.0	2.5	2	0	0	2	2	2	2	ATP	cone	domain
Ribonuc_red_lgN	PF00317.16	gi|297621806|ref|YP_003709943.1|	-	2.3e-20	72.1	0.0	5.3e-20	71.0	0.0	1.7	1	0	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
Ribonuc_red_sm	PF00268.16	gi|297621807|ref|YP_003709944.1|	-	2.2e-49	167.9	0.3	3.6e-49	167.2	0.2	1.2	1	0	0	1	1	1	1	Ribonucleotide	reductase,	small	chain
AurF	PF11583.3	gi|297621807|ref|YP_003709944.1|	-	0.014	14.3	0.0	0.023	13.6	0.0	1.3	1	0	0	1	1	1	0	P-aminobenzoate	N-oxygenase	AurF
PEPCK	PF00821.13	gi|297621808|ref|YP_003709945.1|	-	7e-289	958.9	0.0	7.8e-289	958.8	0.0	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxykinase
MreB_Mbl	PF06723.8	gi|297621809|ref|YP_003709946.1|	-	1.2e-148	494.1	5.9	1.3e-148	493.9	4.1	1.0	1	0	0	1	1	1	1	MreB/Mbl	protein
HSP70	PF00012.15	gi|297621809|ref|YP_003709946.1|	-	1.3e-11	43.1	0.8	3.1e-10	38.6	0.0	2.1	1	1	0	2	2	2	2	Hsp70	protein
FtsA	PF14450.1	gi|297621809|ref|YP_003709946.1|	-	1.5e-08	34.4	0.3	1.6e-06	27.9	0.0	2.7	2	1	0	2	2	2	1	Cell	division	protein	FtsA
Actin	PF00022.14	gi|297621809|ref|YP_003709946.1|	-	2.1e-08	33.0	0.0	0.00053	18.5	0.0	2.4	1	1	0	2	2	2	2	Actin
PilM_2	PF11104.3	gi|297621809|ref|YP_003709946.1|	-	7.9e-06	24.9	0.0	2.5e-05	23.3	0.0	1.8	1	1	0	1	1	1	1	Type	IV	pilus	assembly	protein	PilM;
EutA	PF06277.6	gi|297621809|ref|YP_003709946.1|	-	0.0011	17.7	0.1	0.0068	15.0	0.0	2.1	2	0	0	2	2	2	1	Ethanolamine	utilisation	protein	EutA
Ppx-GppA	PF02541.11	gi|297621809|ref|YP_003709946.1|	-	0.042	13.0	0.0	0.089	11.9	0.0	1.5	1	0	0	1	1	1	0	Ppx/GppA	phosphatase	family
StbA	PF06406.6	gi|297621809|ref|YP_003709946.1|	-	0.068	12.0	0.1	1.5	7.7	0.1	2.1	2	0	0	2	2	2	0	StbA	protein
SNF2_N	PF00176.18	gi|297621810|ref|YP_003709947.1|	-	4.3e-72	242.4	0.3	7e-72	241.7	0.2	1.4	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
Helicase_C	PF00271.26	gi|297621810|ref|YP_003709947.1|	-	1.7e-15	56.6	0.0	8.5e-15	54.3	0.0	2.3	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
SNF2_assoc	PF08455.5	gi|297621810|ref|YP_003709947.1|	-	5.6e-12	44.9	1.1	5.6e-12	44.9	0.8	2.1	2	0	0	2	2	2	1	Bacterial	SNF2	helicase	associated
DEAD	PF00270.24	gi|297621810|ref|YP_003709947.1|	-	1.1e-08	34.7	0.1	3e-08	33.3	0.0	1.8	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
SWIM	PF04434.12	gi|297621810|ref|YP_003709947.1|	-	1.2e-05	24.7	1.6	3e-05	23.3	1.1	1.8	1	0	0	1	1	1	1	SWIM	zinc	finger
AAA_22	PF13401.1	gi|297621810|ref|YP_003709947.1|	-	0.0019	18.3	0.1	0.0088	16.1	0.0	2.1	1	0	0	1	1	1	1	AAA	domain
Trigger_N	PF05697.8	gi|297621811|ref|YP_003709948.1|	-	1.6e-25	89.6	8.6	1.7e-24	86.2	4.1	2.8	2	1	0	2	2	2	1	Bacterial	trigger	factor	protein	(TF)
Trigger_C	PF05698.9	gi|297621811|ref|YP_003709948.1|	-	2.8e-20	72.7	6.5	2.8e-20	72.7	4.5	2.2	3	0	0	3	3	3	1	Bacterial	trigger	factor	protein	(TF)	C-terminus
TOM_sub5	PF15178.1	gi|297621811|ref|YP_003709948.1|	-	0.021	14.4	2.1	2	8.1	0.0	3.4	3	0	0	3	3	3	0	Mitochondrial	import	receptor	subunit	TOM5	homolog
CLP_protease	PF00574.18	gi|297621812|ref|YP_003709949.1|	-	3.9e-77	258.0	0.0	4.6e-77	257.7	0.0	1.0	1	0	0	1	1	1	1	Clp	protease
AAA_2	PF07724.9	gi|297621813|ref|YP_003709950.1|	-	3.1e-46	157.4	0.1	7.2e-46	156.2	0.1	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
zf-C4_ClpX	PF06689.8	gi|297621813|ref|YP_003709950.1|	-	2.8e-16	58.7	3.9	5.6e-16	57.7	2.7	1.5	1	0	0	1	1	1	1	ClpX	C4-type	zinc	finger
AAA	PF00004.24	gi|297621813|ref|YP_003709950.1|	-	1.1e-15	58.0	0.0	3e-15	56.5	0.0	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ClpB_D2-small	PF10431.4	gi|297621813|ref|YP_003709950.1|	-	1.2e-13	50.6	0.5	3.4e-13	49.2	0.4	1.8	1	0	0	1	1	1	1	C-terminal,	D2-small	domain,	of	ClpB	protein
AAA_5	PF07728.9	gi|297621813|ref|YP_003709950.1|	-	4.8e-07	29.5	0.1	2.1e-06	27.5	0.0	2.1	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|297621813|ref|YP_003709950.1|	-	6.7e-07	28.6	0.2	0.0011	18.1	0.0	3.4	2	1	0	3	3	3	1	Magnesium	chelatase,	subunit	ChlI
RuvB_N	PF05496.7	gi|297621813|ref|YP_003709950.1|	-	1.1e-06	27.8	0.2	2.8e-06	26.5	0.1	1.7	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|297621813|ref|YP_003709950.1|	-	9.5e-05	22.5	0.3	0.0029	17.7	0.2	2.6	1	1	0	1	1	1	1	AAA	domain
MCM	PF00493.18	gi|297621813|ref|YP_003709950.1|	-	0.00012	21.0	0.1	0.00024	20.0	0.1	1.4	1	0	0	1	1	1	1	MCM2/3/5	family
AAA_17	PF13207.1	gi|297621813|ref|YP_003709950.1|	-	0.00014	22.6	0.2	0.00043	21.0	0.0	2.0	2	0	0	2	2	1	1	AAA	domain
AAA_23	PF13476.1	gi|297621813|ref|YP_003709950.1|	-	0.00025	21.4	1.7	0.00025	21.4	1.2	2.2	2	1	0	2	2	2	1	AAA	domain
TIP49	PF06068.8	gi|297621813|ref|YP_003709950.1|	-	0.00034	19.4	0.3	0.0011	17.7	0.0	2.0	2	1	1	3	3	3	1	TIP49	C-terminus
IstB_IS21	PF01695.12	gi|297621813|ref|YP_003709950.1|	-	0.00066	19.1	0.0	0.0014	18.0	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
SMC_N	PF02463.14	gi|297621813|ref|YP_003709950.1|	-	0.00068	18.9	0.1	0.0018	17.5	0.0	1.7	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
Sigma54_activat	PF00158.21	gi|297621813|ref|YP_003709950.1|	-	0.0013	18.2	0.0	0.057	12.8	0.0	2.4	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_18	PF13238.1	gi|297621813|ref|YP_003709950.1|	-	0.0027	18.0	0.0	0.0082	16.4	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
Sigma54_activ_2	PF14532.1	gi|297621813|ref|YP_003709950.1|	-	0.0033	17.4	0.0	0.013	15.5	0.0	2.0	1	1	0	1	1	1	1	Sigma-54	interaction	domain
T2SE	PF00437.15	gi|297621813|ref|YP_003709950.1|	-	0.0054	15.6	0.0	0.011	14.6	0.0	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_14	PF13173.1	gi|297621813|ref|YP_003709950.1|	-	0.0084	16.0	0.0	0.025	14.4	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|297621813|ref|YP_003709950.1|	-	0.01	15.5	0.0	0.033	13.9	0.0	1.9	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_16	PF13191.1	gi|297621813|ref|YP_003709950.1|	-	0.012	15.6	0.1	0.031	14.2	0.0	1.8	2	1	0	2	2	1	0	AAA	ATPase	domain
AAA_29	PF13555.1	gi|297621813|ref|YP_003709950.1|	-	0.019	14.4	0.0	0.043	13.3	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_24	PF13479.1	gi|297621813|ref|YP_003709950.1|	-	0.02	14.4	0.1	0.04	13.4	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|297621813|ref|YP_003709950.1|	-	0.025	14.8	0.0	0.078	13.2	0.0	1.9	2	0	0	2	2	1	0	ABC	transporter
PhoH	PF02562.11	gi|297621813|ref|YP_003709950.1|	-	0.026	13.7	0.1	0.095	11.9	0.0	1.9	2	0	0	2	2	2	0	PhoH-like	protein
AAA_25	PF13481.1	gi|297621813|ref|YP_003709950.1|	-	0.03	13.7	0.0	0.057	12.8	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
ResIII	PF04851.10	gi|297621813|ref|YP_003709950.1|	-	0.034	13.9	0.1	0.1	12.4	0.0	1.9	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
SKI	PF01202.17	gi|297621813|ref|YP_003709950.1|	-	0.052	13.4	0.0	0.63	9.9	0.0	2.4	2	0	0	2	2	2	0	Shikimate	kinase
Parvo_NS1	PF01057.12	gi|297621813|ref|YP_003709950.1|	-	0.063	12.1	0.1	0.57	9.0	0.0	2.1	2	0	0	2	2	2	0	Parvovirus	non-structural	protein	NS1
DEAD	PF00270.24	gi|297621813|ref|YP_003709950.1|	-	0.064	12.7	0.1	0.24	10.8	0.0	1.8	1	1	0	2	2	2	0	DEAD/DEAH	box	helicase
RNA_helicase	PF00910.17	gi|297621813|ref|YP_003709950.1|	-	0.074	13.2	0.0	0.35	11.0	0.0	2.2	1	1	1	2	2	1	0	RNA	helicase
UPF0079	PF02367.12	gi|297621813|ref|YP_003709950.1|	-	0.084	12.5	0.0	0.16	11.6	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_33	PF13671.1	gi|297621813|ref|YP_003709950.1|	-	0.086	12.7	0.0	0.27	11.1	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
Ribosomal_S18	PF01084.15	gi|297621814|ref|YP_003709951.1|	-	0.029	14.2	0.3	0.064	13.1	0.2	1.5	1	0	0	1	1	1	0	Ribosomal	protein	S18
PilJ	PF13675.1	gi|297621815|ref|YP_003709952.1|	-	1.9	8.8	10.8	0.77	10.1	0.5	4.3	4	1	1	5	5	5	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
TBPIP	PF07106.8	gi|297621815|ref|YP_003709952.1|	-	2.1	7.8	8.5	0.51	9.8	0.2	2.9	3	0	0	3	3	3	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
DUF4404	PF14357.1	gi|297621816|ref|YP_003709953.1|	-	0.034	14.5	3.7	6.4	7.2	0.2	3.9	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4404)
NMO	PF03060.10	gi|297621816|ref|YP_003709953.1|	-	0.036	13.2	0.0	3.1	6.8	0.0	2.3	2	0	0	2	2	2	0	Nitronate	monooxygenase
ApoO	PF09769.4	gi|297621817|ref|YP_003709954.1|	-	0.01	15.5	0.1	0.017	14.8	0.1	1.3	1	0	0	1	1	1	0	Apolipoprotein	O
COG2	PF06148.6	gi|297621817|ref|YP_003709954.1|	-	0.016	15.0	0.1	0.043	13.6	0.1	1.7	1	0	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
TPR_11	PF13414.1	gi|297621818|ref|YP_003709955.1|	-	3.3e-13	49.0	0.3	3.5e-07	29.7	0.1	2.6	2	1	1	3	3	3	2	TPR	repeat
TPR_3	PF07720.7	gi|297621818|ref|YP_003709955.1|	-	2.2e-10	40.1	4.9	0.00014	21.6	0.0	3.2	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297621818|ref|YP_003709955.1|	-	9.2e-07	28.3	0.1	0.041	13.8	0.0	3.7	4	0	0	4	4	4	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297621818|ref|YP_003709955.1|	-	1.6e-06	28.1	1.5	8e-05	22.6	0.4	2.5	3	0	0	3	3	3	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_19	PF14559.1	gi|297621818|ref|YP_003709955.1|	-	4e-06	27.0	0.0	0.0059	16.9	0.0	3.0	2	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297621818|ref|YP_003709955.1|	-	6.1e-06	26.7	0.0	0.00021	21.8	0.0	2.3	1	1	1	2	2	2	1	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|297621818|ref|YP_003709955.1|	-	0.0033	16.9	4.1	0.96	9.1	0.0	3.7	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|297621818|ref|YP_003709955.1|	-	0.013	15.9	3.4	19	5.9	0.3	4.3	4	0	0	4	4	4	0	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297621818|ref|YP_003709955.1|	-	0.061	13.1	4.5	1.4	8.8	0.0	4.0	4	0	0	4	4	4	0	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297621818|ref|YP_003709955.1|	-	0.071	13.0	0.5	5.2	7.0	0.0	3.1	1	1	1	2	2	2	0	Tetratricopeptide	repeat
SseC	PF04888.7	gi|297621819|ref|YP_003709956.1|	-	0.00014	21.3	50.7	0.00041	19.7	31.3	3.7	2	1	0	2	2	2	1	Secretion	system	effector	C	(SseC)	like	family
Prominin	PF05478.6	gi|297621819|ref|YP_003709956.1|	-	0.003	15.1	0.8	0.003	15.1	0.6	3.0	3	2	1	4	4	4	1	Prominin
COG2	PF06148.6	gi|297621819|ref|YP_003709956.1|	-	1.1	9.1	17.1	7.7	6.3	0.6	5.4	4	2	1	5	5	5	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Blo-t-5	PF11642.3	gi|297621819|ref|YP_003709956.1|	-	1.3	8.7	10.1	10	5.9	0.3	3.8	3	1	0	3	3	3	0	Mite	allergen	Blo	t	5
DUF904	PF06005.7	gi|297621819|ref|YP_003709956.1|	-	7.8	6.8	14.7	0.23	11.7	0.2	4.4	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF904)
TPR_3	PF07720.7	gi|297621820|ref|YP_003709957.1|	-	9.9e-12	44.3	4.4	1.8e-05	24.4	0.1	2.5	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|297621820|ref|YP_003709957.1|	-	6.9e-08	32.0	5.2	0.00019	20.9	2.0	2.7	2	1	1	3	3	3	2	TPR	repeat
TPR_2	PF07719.12	gi|297621820|ref|YP_003709957.1|	-	2.1e-06	27.1	1.7	0.45	10.5	0.1	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297621820|ref|YP_003709957.1|	-	6.7e-06	26.1	6.1	0.0001	22.3	0.7	2.2	1	1	1	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_1	PF00515.23	gi|297621820|ref|YP_003709957.1|	-	1.6e-05	24.3	0.7	0.013	15.0	0.0	3.3	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297621820|ref|YP_003709957.1|	-	0.00043	20.8	0.0	0.0012	19.5	0.0	1.8	2	0	0	2	2	1	1	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297621820|ref|YP_003709957.1|	-	0.0016	18.3	3.7	0.16	11.9	0.0	3.3	2	1	1	3	3	3	1	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|297621820|ref|YP_003709957.1|	-	0.0044	17.1	0.2	3.1	8.2	0.1	3.3	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|297621820|ref|YP_003709957.1|	-	0.0084	16.4	0.0	0.44	10.9	0.0	2.6	1	1	2	3	3	3	2	Tetratricopeptide	repeat
YopR_core	PF09025.5	gi|297621820|ref|YP_003709957.1|	-	0.018	15.0	0.0	0.027	14.4	0.0	1.2	1	0	0	1	1	1	0	YopR	Core
DUF2800	PF10926.3	gi|297621820|ref|YP_003709957.1|	-	0.094	11.8	0.0	5.8	5.9	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2800)
Sen15	PF09631.5	gi|297621820|ref|YP_003709957.1|	-	0.13	12.4	0.0	0.39	10.9	0.0	1.8	1	1	0	1	1	1	0	Sen15	protein
Fis1_TPR_C	PF14853.1	gi|297621820|ref|YP_003709957.1|	-	3.7	7.4	6.5	18	5.2	0.1	2.9	3	0	0	3	3	3	0	Fis1	C-terminal	tetratricopeptide	repeat
VitK2_biosynth	PF02621.9	gi|297621822|ref|YP_003709959.1|	-	0.03	13.5	0.6	0.3	10.2	0.1	2.2	1	1	1	2	2	2	0	Menaquinone	biosynthesis
Metal_resist	PF13801.1	gi|297621822|ref|YP_003709959.1|	-	0.12	12.3	1.4	0.48	10.4	0.5	2.1	2	0	0	2	2	2	0	Heavy-metal	resistance
DUF3458	PF11940.3	gi|297621822|ref|YP_003709959.1|	-	0.16	10.7	2.7	0.28	9.9	0.7	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3458)
DUF4319	PF14203.1	gi|297621823|ref|YP_003709960.1|	-	0.088	12.3	2.0	0.2	11.2	0.1	2.5	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4319)
CesT	PF05932.8	gi|297621824|ref|YP_003709961.1|	-	9.4e-16	57.7	0.0	1.2e-15	57.4	0.0	1.1	1	0	0	1	1	1	1	Tir	chaperone	protein	(CesT)	family
Chaperone_III	PF07824.7	gi|297621824|ref|YP_003709961.1|	-	0.047	13.6	0.0	0.056	13.3	0.0	1.2	1	0	0	1	1	1	0	Type	III	secretion	chaperone	domain
FHA	PF00498.21	gi|297621825|ref|YP_003709962.1|	-	6.7e-22	77.3	0.0	1.3e-13	50.8	0.0	2.5	2	0	0	2	2	2	2	FHA	domain
BON	PF04972.12	gi|297621825|ref|YP_003709962.1|	-	1.9e-05	24.3	0.1	0.0034	17.1	0.1	2.9	3	0	0	3	3	3	1	BON	domain
PilN	PF05137.8	gi|297621825|ref|YP_003709962.1|	-	0.0069	16.1	0.6	14	5.6	0.0	3.5	3	0	0	3	3	3	1	Fimbrial	assembly	protein	(PilN)
Pilus_PilP	PF11356.3	gi|297621825|ref|YP_003709962.1|	-	0.095	12.9	0.5	0.31	11.2	0.1	2.1	2	0	0	2	2	2	0	Type	IV	pilus	biogenesis
AsnC_trans_reg	PF01037.16	gi|297621825|ref|YP_003709962.1|	-	0.097	12.3	0.0	1.1	9.0	0.0	2.3	2	0	0	2	2	2	0	AsnC	family
Saw1	PF11561.3	gi|297621825|ref|YP_003709962.1|	-	0.4	10.0	3.6	3.8	6.8	0.1	2.5	2	0	0	2	2	2	0	Single	strand	annealing-weakened	1
Macoilin	PF09726.4	gi|297621826|ref|YP_003709963.1|	-	0.49	8.6	3.7	0.57	8.3	2.6	1.0	1	0	0	1	1	1	0	Transmembrane	protein
MxiH	PF09392.5	gi|297621827|ref|YP_003709964.1|	-	0.1	13.1	4.6	0.17	12.4	3.2	1.5	1	1	0	1	1	1	0	Type	III	secretion	needle	MxiH	like
Flagellin_C	PF00700.16	gi|297621827|ref|YP_003709964.1|	-	0.16	12.1	2.5	0.24	11.5	1.7	1.4	1	0	0	1	1	1	0	Bacterial	flagellin	C-terminal	helical	region
HrpB1_HrpK	PF09613.5	gi|297621828|ref|YP_003709965.1|	-	0.014	14.9	0.0	0.015	14.7	0.0	1.1	1	0	0	1	1	1	0	Bacterial	type	III	secretion	protein	(HrpB1_HrpK)
TPR_19	PF14559.1	gi|297621828|ref|YP_003709965.1|	-	0.056	13.7	0.0	0.22	11.8	0.0	1.9	1	1	1	2	2	2	0	Tetratricopeptide	repeat
Coatomer_E	PF04733.9	gi|297621828|ref|YP_003709965.1|	-	0.099	11.8	0.0	0.12	11.5	0.0	1.2	1	0	0	1	1	1	0	Coatomer	epsilon	subunit
PilJ	PF13675.1	gi|297621829|ref|YP_003709966.1|	-	0.14	12.5	2.7	0.28	11.4	0.7	2.1	1	1	1	2	2	2	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
FliE	PF02049.13	gi|297621829|ref|YP_003709966.1|	-	0.18	11.8	10.2	0.2	11.6	1.8	3.0	2	1	1	3	3	3	0	Flagellar	hook-basal	body	complex	protein	FliE
DUF1843	PF08898.5	gi|297621829|ref|YP_003709966.1|	-	1.6	8.8	5.1	12	6.0	0.0	3.6	2	2	1	3	3	3	0	Domain	of	unknown	function	(DUF1843)
Baculo_PEP_C	PF04513.7	gi|297621829|ref|YP_003709966.1|	-	2.1	8.1	11.0	0.92	9.3	0.7	2.6	3	0	0	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
MxiH	PF09392.5	gi|297621829|ref|YP_003709966.1|	-	2.1	8.9	12.3	43	4.7	8.5	2.6	1	1	0	1	1	1	0	Type	III	secretion	needle	MxiH	like
Carbpep_Y_N	PF05388.6	gi|297621829|ref|YP_003709966.1|	-	9.7	6.3	8.5	35	4.5	0.1	3.2	2	1	1	3	3	3	0	Carboxypeptidase	Y	pro-peptide
ATP-synt_ab	PF00006.20	gi|297621830|ref|YP_003709967.1|	-	4.3e-68	229.0	0.0	6e-68	228.5	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_N	PF02874.18	gi|297621830|ref|YP_003709967.1|	-	2.2e-06	27.7	0.5	4.9e-06	26.6	0.3	1.6	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
ABC_tran	PF00005.22	gi|297621830|ref|YP_003709967.1|	-	0.0052	17.0	0.1	0.015	15.6	0.1	1.7	1	1	1	2	2	2	1	ABC	transporter
AAA_25	PF13481.1	gi|297621830|ref|YP_003709967.1|	-	0.013	14.9	0.0	0.026	13.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Arch_ATPase	PF01637.13	gi|297621830|ref|YP_003709967.1|	-	0.031	13.9	0.0	0.062	12.9	0.0	1.4	1	0	0	1	1	1	0	Archaeal	ATPase
DUF87	PF01935.12	gi|297621830|ref|YP_003709967.1|	-	0.073	12.8	0.2	0.14	11.9	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
DUF258	PF03193.11	gi|297621830|ref|YP_003709967.1|	-	0.12	11.5	0.1	0.23	10.6	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
FliJ	PF02050.11	gi|297621831|ref|YP_003709968.1|	-	1.2e-05	25.3	32.8	0.00011	22.2	22.2	2.3	1	1	1	2	2	2	1	Flagellar	FliJ	protein
YscO	PF07321.7	gi|297621831|ref|YP_003709968.1|	-	0.0034	17.2	34.3	0.0063	16.3	23.8	1.4	1	1	0	1	1	1	1	Type	III	secretion	protein	YscO
HrpB7	PF09486.5	gi|297621831|ref|YP_003709968.1|	-	0.045	13.6	20.6	0.064	13.1	14.3	1.2	1	0	0	1	1	1	0	Bacterial	type	III	secretion	protein	(HrpB7)
AAA_27	PF13514.1	gi|297621831|ref|YP_003709968.1|	-	0.14	9.8	19.9	0.16	9.5	13.8	1.1	1	0	0	1	1	1	0	AAA	domain
AAA_13	PF13166.1	gi|297621831|ref|YP_003709968.1|	-	0.39	9.1	20.4	0.52	8.7	14.1	1.1	1	0	0	1	1	1	0	AAA	domain
DUF3573	PF12097.3	gi|297621831|ref|YP_003709968.1|	-	0.49	8.9	3.3	0.58	8.7	2.3	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3573)
Spc7	PF08317.6	gi|297621831|ref|YP_003709968.1|	-	0.56	8.8	26.6	1.2	7.6	18.4	1.6	1	1	0	1	1	1	0	Spc7	kinetochore	protein
Borrelia_P83	PF05262.6	gi|297621831|ref|YP_003709968.1|	-	0.58	8.3	29.3	0.75	7.9	20.3	1.0	1	0	0	1	1	1	0	Borrelia	P83/100	protein
DUF3552	PF12072.3	gi|297621831|ref|YP_003709968.1|	-	0.7	9.0	35.8	0.77	8.9	7.0	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3552)
Exonuc_VII_L	PF02601.10	gi|297621831|ref|YP_003709968.1|	-	1.3	8.1	15.0	1.8	7.6	10.4	1.2	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
LemA	PF04011.7	gi|297621831|ref|YP_003709968.1|	-	2.5	7.1	13.2	0.66	9.0	5.9	2.0	1	1	1	2	2	2	0	LemA	family
Bacillus_HBL	PF05791.6	gi|297621831|ref|YP_003709968.1|	-	2.5	7.4	16.5	0.56	9.5	1.4	2.1	1	1	1	2	2	2	0	Bacillus	haemolytic	enterotoxin	(HBL)
DUF3584	PF12128.3	gi|297621831|ref|YP_003709968.1|	-	2.9	5.1	27.4	2.4	5.3	9.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
DNA_pol_B_3	PF08408.5	gi|297621831|ref|YP_003709968.1|	-	4.7	7.0	6.7	1	9.2	2.0	1.8	1	1	1	2	2	2	0	DNA	polymerase	family	B	viral	insert
RNA_pol_Rpb1_5	PF04998.12	gi|297621831|ref|YP_003709968.1|	-	8.7	5.5	10.6	12	5.0	7.4	1.2	1	0	0	1	1	1	0	RNA	polymerase	Rpb1,	domain	5
DUF4140	PF13600.1	gi|297621832|ref|YP_003709969.1|	-	4.4	7.8	10.6	4.4	7.8	0.1	3.6	2	2	2	4	4	4	0	N-terminal	domain	of	unknown	function	(DUF4140)
SpoA	PF01052.15	gi|297621833|ref|YP_003709970.1|	-	0.03	13.9	0.0	0.096	12.2	0.0	1.8	1	1	0	1	1	1	0	Surface	presentation	of	antigens	(SPOA)
SpoA	PF01052.15	gi|297621834|ref|YP_003709971.1|	-	8.6e-17	60.5	0.4	1.2e-16	60.0	0.3	1.2	1	0	0	1	1	1	1	Surface	presentation	of	antigens	(SPOA)
SAPS	PF04499.10	gi|297621834|ref|YP_003709971.1|	-	0.087	11.4	2.5	0.075	11.6	1.7	1.0	1	0	0	1	1	1	0	SIT4	phosphatase-associated	protein
CENP-T	PF15511.1	gi|297621834|ref|YP_003709971.1|	-	0.14	11.3	17.9	0.17	11.0	12.4	1.0	1	0	0	1	1	1	0	Centromere	kinetochore	component	CENP-T
Hid1	PF12722.2	gi|297621834|ref|YP_003709971.1|	-	0.37	8.4	1.3	0.43	8.2	0.9	1.0	1	0	0	1	1	1	0	High-temperature-induced	dauer-formation	protein
CDC45	PF02724.9	gi|297621834|ref|YP_003709971.1|	-	0.52	8.2	17.5	0.57	8.1	12.1	1.1	1	0	0	1	1	1	0	CDC45-like	protein
SDA1	PF05285.7	gi|297621834|ref|YP_003709971.1|	-	1	8.5	28.7	1.2	8.3	19.9	1.0	1	0	0	1	1	1	0	SDA1
Ycf1	PF05758.7	gi|297621834|ref|YP_003709971.1|	-	1.6	6.3	8.5	1.6	6.3	5.9	1.0	1	0	0	1	1	1	0	Ycf1
Nop14	PF04147.7	gi|297621834|ref|YP_003709971.1|	-	2.2	6.1	33.6	2.5	5.9	23.3	1.0	1	0	0	1	1	1	0	Nop14-like	family
Tim54	PF11711.3	gi|297621834|ref|YP_003709971.1|	-	2.3	6.7	7.1	2.7	6.4	4.9	1.1	1	0	0	1	1	1	0	Inner	membrane	protein	import	complex	subunit	Tim54
YL1	PF05764.8	gi|297621834|ref|YP_003709971.1|	-	3.2	7.2	32.2	4.1	6.9	22.3	1.1	1	0	0	1	1	1	0	YL1	nuclear	protein
Pkinase	PF00069.20	gi|297621835|ref|YP_003709972.1|	-	1.7e-44	151.9	0.0	2.5e-44	151.3	0.0	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|297621835|ref|YP_003709972.1|	-	2.1e-33	115.5	0.0	1.1e-32	113.1	0.0	2.0	2	0	0	2	2	2	1	Protein	tyrosine	kinase
SpoIIE	PF07228.7	gi|297621835|ref|YP_003709972.1|	-	3.1e-07	30.2	0.0	1.3e-06	28.2	0.0	1.9	1	1	0	1	1	1	1	Stage	II	sporulation	protein	E	(SpoIIE)
APH	PF01636.18	gi|297621835|ref|YP_003709972.1|	-	1.3e-05	25.0	0.0	0.0015	18.2	0.0	2.2	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Kdo	PF06293.9	gi|297621835|ref|YP_003709972.1|	-	3.9e-05	22.8	0.0	7.3e-05	21.9	0.0	1.3	1	0	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Kinase-like	PF14531.1	gi|297621835|ref|YP_003709972.1|	-	0.005	15.8	0.0	0.0087	15.0	0.0	1.3	1	0	0	1	1	1	1	Kinase-like
Seadorna_VP7	PF07387.6	gi|297621835|ref|YP_003709972.1|	-	0.027	13.2	0.3	0.13	11.1	0.0	1.9	2	0	0	2	2	2	0	Seadornavirus	VP7
Choline_kinase	PF01633.15	gi|297621835|ref|YP_003709972.1|	-	0.052	13.1	0.0	0.56	9.7	0.0	2.3	2	0	0	2	2	2	0	Choline/ethanolamine	kinase
RIO1	PF01163.17	gi|297621835|ref|YP_003709972.1|	-	0.055	12.8	0.0	0.095	12.0	0.0	1.4	1	0	0	1	1	1	0	RIO1	family
Secretin	PF00263.16	gi|297621836|ref|YP_003709973.1|	-	2.2e-33	114.9	3.6	5.4e-33	113.6	2.5	1.7	1	0	0	1	1	1	1	Bacterial	type	II	and	III	secretion	system	protein
Secretin_N	PF03958.12	gi|297621836|ref|YP_003709973.1|	-	1.5e-13	50.6	2.0	0.00061	19.9	0.0	4.1	3	0	0	3	3	3	3	Bacterial	type	II/III	secretion	system	short	domain
DUF3677	PF12432.3	gi|297621836|ref|YP_003709973.1|	-	1.3	9.5	4.2	93	3.5	0.2	3.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3677)
TPR_19	PF14559.1	gi|297621837|ref|YP_003709974.1|	-	0.00095	19.4	0.1	3	8.2	0.0	3.3	2	1	0	3	3	3	1	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297621837|ref|YP_003709974.1|	-	0.05	14.2	1.0	3.2	8.5	0.2	3.2	2	1	1	3	3	3	0	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297621837|ref|YP_003709974.1|	-	0.071	13.2	1.4	0.73	10.0	0.1	2.7	2	0	0	2	2	2	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_14	PF13428.1	gi|297621837|ref|YP_003709974.1|	-	0.17	12.5	1.1	7.8	7.4	0.2	2.9	2	1	0	2	2	2	0	Tetratricopeptide	repeat
Haemolytic	PF01809.13	gi|297621838|ref|YP_003709975.1|	-	2.3e-11	43.1	0.0	4.4e-11	42.2	0.0	1.5	1	0	0	1	1	1	1	Haemolytic	domain
Sulfate_transp	PF00916.15	gi|297621839|ref|YP_003709976.1|	-	4.9e-49	166.8	14.7	4.9e-49	166.8	10.2	1.9	2	0	0	2	2	2	1	Sulfate	transporter	family
Sulfate_tra_GLY	PF13792.1	gi|297621839|ref|YP_003709976.1|	-	9.9e-26	89.2	1.4	9.9e-26	89.2	0.9	3.7	4	1	0	4	4	4	1	Sulfate	transporter	N-terminal	domain	with	GLY	motif
STAS	PF01740.16	gi|297621839|ref|YP_003709976.1|	-	1.6e-08	33.9	0.1	3.5e-08	32.8	0.1	1.4	1	0	0	1	1	1	1	STAS	domain
MMR_HSR1	PF01926.18	gi|297621840|ref|YP_003709977.1|	-	7.2e-50	167.8	0.0	2.9e-25	88.4	0.0	2.3	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
KH_dom-like	PF14714.1	gi|297621840|ref|YP_003709977.1|	-	5.7e-29	99.9	0.5	1.2e-28	98.9	0.3	1.5	1	0	0	1	1	1	1	KH-domain-like	of	EngA	bacterial	GTPase	enzymes,	C-terminal
FeoB_N	PF02421.13	gi|297621840|ref|YP_003709977.1|	-	2.3e-25	88.6	0.0	1.1e-13	50.6	0.0	2.3	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|297621840|ref|YP_003709977.1|	-	5.7e-25	87.8	1.3	8.9e-11	41.5	0.0	5.3	4	2	0	4	4	4	3	Elongation	factor	Tu	GTP	binding	domain
Dynamin_N	PF00350.18	gi|297621840|ref|YP_003709977.1|	-	3.1e-16	59.6	0.2	2.1e-05	24.4	0.0	4.3	2	2	2	4	4	4	3	Dynamin	family
Miro	PF08477.8	gi|297621840|ref|YP_003709977.1|	-	5.8e-16	59.0	0.0	8.2e-07	29.5	0.0	2.6	2	0	0	2	2	2	2	Miro-like	protein
AIG1	PF04548.11	gi|297621840|ref|YP_003709977.1|	-	1.7e-11	43.6	0.0	9.9e-05	21.5	0.0	3.2	3	0	0	3	3	3	2	AIG1	family
Ras	PF00071.17	gi|297621840|ref|YP_003709977.1|	-	5e-08	32.5	0.0	0.0059	16.0	0.0	2.8	2	2	0	2	2	2	2	Ras	family
AAA_17	PF13207.1	gi|297621840|ref|YP_003709977.1|	-	5.1e-07	30.5	0.1	0.019	15.7	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
AAA_18	PF13238.1	gi|297621840|ref|YP_003709977.1|	-	1.1e-06	28.9	0.0	0.0085	16.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|297621840|ref|YP_003709977.1|	-	1.2e-06	27.8	0.0	0.0089	15.2	0.0	3.1	3	0	0	3	3	3	2	Protein	of	unknown	function,	DUF258
ABC_tran	PF00005.22	gi|297621840|ref|YP_003709977.1|	-	1.2e-05	25.5	0.0	0.22	11.8	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
MobB	PF03205.9	gi|297621840|ref|YP_003709977.1|	-	0.00018	21.2	0.4	1.1	8.9	0.0	3.4	4	0	0	4	4	4	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
cobW	PF02492.14	gi|297621840|ref|YP_003709977.1|	-	0.00021	20.8	0.6	0.13	11.6	0.0	3.5	2	2	1	4	4	4	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_22	PF13401.1	gi|297621840|ref|YP_003709977.1|	-	0.00036	20.6	0.1	0.44	10.6	0.0	3.1	1	1	0	2	2	2	1	AAA	domain
Arf	PF00025.16	gi|297621840|ref|YP_003709977.1|	-	0.00037	19.7	0.1	0.95	8.6	0.0	3.6	3	1	0	3	3	3	1	ADP-ribosylation	factor	family
RNA_helicase	PF00910.17	gi|297621840|ref|YP_003709977.1|	-	0.00045	20.3	0.0	1.2	9.3	0.0	2.5	2	0	0	2	2	2	2	RNA	helicase
SRPRB	PF09439.5	gi|297621840|ref|YP_003709977.1|	-	0.0015	17.7	0.0	0.14	11.3	0.0	2.6	2	0	0	2	2	2	1	Signal	recognition	particle	receptor	beta	subunit
PduV-EutP	PF10662.4	gi|297621840|ref|YP_003709977.1|	-	0.0033	16.9	0.2	7.1	6.1	0.0	3.7	3	1	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
NTPase_1	PF03266.10	gi|297621840|ref|YP_003709977.1|	-	0.0047	16.6	0.1	3.6	7.2	0.0	2.8	3	0	0	3	3	2	1	NTPase
AAA_14	PF13173.1	gi|297621840|ref|YP_003709977.1|	-	0.0052	16.6	0.0	5.2	6.9	0.0	2.9	3	1	0	3	3	3	0	AAA	domain
AAA_10	PF12846.2	gi|297621840|ref|YP_003709977.1|	-	0.0091	15.4	0.0	3.5	6.9	0.0	2.5	2	0	0	2	2	2	1	AAA-like	domain
DUF371	PF04027.8	gi|297621840|ref|YP_003709977.1|	-	0.012	15.2	0.7	0.64	9.6	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF371)
AAA_28	PF13521.1	gi|297621840|ref|YP_003709977.1|	-	0.012	15.5	0.0	1.5	8.7	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|297621840|ref|YP_003709977.1|	-	0.016	14.7	0.0	1.3	8.6	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
Arch_ATPase	PF01637.13	gi|297621840|ref|YP_003709977.1|	-	0.017	14.8	0.0	2.7	7.6	0.0	2.7	2	0	0	2	2	2	0	Archaeal	ATPase
Guanylate_kin	PF00625.16	gi|297621840|ref|YP_003709977.1|	-	0.03	13.7	0.0	0.079	12.4	0.0	1.8	1	0	0	1	1	1	0	Guanylate	kinase
NB-ARC	PF00931.17	gi|297621840|ref|YP_003709977.1|	-	0.036	12.9	0.0	11	4.7	0.0	2.8	2	1	1	3	3	3	0	NB-ARC	domain
AAA_29	PF13555.1	gi|297621840|ref|YP_003709977.1|	-	0.049	13.1	0.0	5.2	6.6	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|297621840|ref|YP_003709977.1|	-	0.054	13.6	0.0	23	5.1	0.0	3.4	3	2	0	3	3	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF4062	PF13271.1	gi|297621840|ref|YP_003709977.1|	-	0.061	13.3	0.1	0.32	11.0	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4062)
ArgK	PF03308.11	gi|297621840|ref|YP_003709977.1|	-	0.063	12.0	0.0	8.5	5.0	0.0	3.0	3	0	0	3	3	3	0	ArgK	protein
AAA_25	PF13481.1	gi|297621840|ref|YP_003709977.1|	-	0.067	12.5	0.0	9.8	5.5	0.0	3.1	3	0	0	3	3	3	0	AAA	domain
MR_MLE	PF01188.16	gi|297621840|ref|YP_003709977.1|	-	0.088	13.3	0.3	3.1	8.3	0.0	2.6	2	0	0	2	2	2	0	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
SNF2_N	PF00176.18	gi|297621841|ref|YP_003709978.1|	-	1e-58	198.5	0.0	1.5e-58	197.9	0.0	1.2	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
Helicase_C	PF00271.26	gi|297621841|ref|YP_003709978.1|	-	5.3e-11	42.2	0.1	1.4e-10	40.9	0.1	1.8	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
SWIM	PF04434.12	gi|297621841|ref|YP_003709978.1|	-	0.0065	15.9	0.6	0.013	14.9	0.4	1.6	1	0	0	1	1	1	1	SWIM	zinc	finger
AAA_22	PF13401.1	gi|297621841|ref|YP_003709978.1|	-	0.093	12.8	0.0	0.42	10.7	0.0	2.1	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|297621841|ref|YP_003709978.1|	-	0.25	11.1	0.0	0.74	9.6	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
AlaDh_PNT_C	PF01262.16	gi|297621842|ref|YP_003709979.1|	-	6e-50	169.0	0.0	8.6e-50	168.5	0.0	1.2	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
AlaDh_PNT_N	PF05222.10	gi|297621842|ref|YP_003709979.1|	-	1.6e-45	154.4	0.1	2.6e-45	153.7	0.0	1.4	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	N-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|297621842|ref|YP_003709979.1|	-	5.9e-09	35.3	0.0	1.1e-08	34.4	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|297621842|ref|YP_003709979.1|	-	3.6e-08	33.5	0.0	7.6e-08	32.5	0.0	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox	PF00070.22	gi|297621842|ref|YP_003709979.1|	-	4.8e-07	30.1	0.1	1.3e-06	28.6	0.1	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|297621842|ref|YP_003709979.1|	-	0.00057	19.8	0.1	0.0011	18.9	0.1	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|297621842|ref|YP_003709979.1|	-	0.00065	18.6	0.2	0.0015	17.4	0.1	1.5	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
NAD_binding_7	PF13241.1	gi|297621842|ref|YP_003709979.1|	-	0.00066	19.9	0.1	0.0019	18.4	0.0	1.7	2	0	0	2	2	2	1	Putative	NAD(P)-binding
3HCDH_N	PF02737.13	gi|297621842|ref|YP_003709979.1|	-	0.0011	18.6	0.4	0.0022	17.6	0.1	1.7	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|297621842|ref|YP_003709979.1|	-	0.0013	18.6	0.2	0.013	15.3	0.0	2.2	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
DAO	PF01266.19	gi|297621842|ref|YP_003709979.1|	-	0.0029	16.5	1.4	0.0057	15.6	1.0	1.5	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
THF_DHG_CYH_C	PF02882.14	gi|297621842|ref|YP_003709979.1|	-	0.0053	15.8	0.6	0.023	13.7	0.4	2.0	1	1	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
TrkA_N	PF02254.13	gi|297621842|ref|YP_003709979.1|	-	0.011	15.6	0.1	0.03	14.3	0.0	1.8	1	0	0	1	1	1	0	TrkA-N	domain
Saccharop_dh	PF03435.13	gi|297621842|ref|YP_003709979.1|	-	0.079	11.9	0.1	0.15	11.0	0.1	1.4	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
PYC_OADA	PF02436.13	gi|297621842|ref|YP_003709979.1|	-	0.11	11.9	0.0	0.18	11.1	0.0	1.4	1	0	0	1	1	1	0	Conserved	carboxylase	domain
FAD_oxidored	PF12831.2	gi|297621842|ref|YP_003709979.1|	-	0.55	9.2	3.5	0.88	8.5	2.5	1.3	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.9	gi|297621842|ref|YP_003709979.1|	-	0.87	8.1	2.3	2.7	6.5	0.0	2.0	2	0	0	2	2	2	0	Tryptophan	halogenase
SMC_N	PF02463.14	gi|297621843|ref|YP_003709980.1|	-	2.7e-66	222.9	13.9	6.6e-66	221.6	9.6	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|297621843|ref|YP_003709980.1|	-	3.4e-20	73.2	0.4	3.4e-20	73.2	0.3	6.6	2	2	1	4	4	4	1	AAA	domain
AAA_21	PF13304.1	gi|297621843|ref|YP_003709980.1|	-	3.7e-15	56.6	2.5	1.5e-07	31.7	0.5	2.9	2	1	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|297621843|ref|YP_003709980.1|	-	4.1e-05	22.8	0.0	4.1e-05	22.8	0.0	4.0	3	2	0	3	3	3	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|297621843|ref|YP_003709980.1|	-	0.00059	19.3	0.1	0.0016	17.9	0.0	1.8	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_13	PF13166.1	gi|297621843|ref|YP_003709980.1|	-	0.0022	16.5	15.0	0.0022	16.5	10.4	5.1	2	2	3	5	5	5	2	AAA	domain
Reo_sigmaC	PF04582.7	gi|297621843|ref|YP_003709980.1|	-	0.031	13.4	2.6	0.57	9.3	0.1	2.8	2	1	0	2	2	2	0	Reovirus	sigma	C	capsid	protein
ABC_tran	PF00005.22	gi|297621843|ref|YP_003709980.1|	-	0.15	12.3	0.0	0.15	12.3	0.0	6.1	3	2	0	3	3	3	0	ABC	transporter
Lipase_GDSL_2	PF13472.1	gi|297621843|ref|YP_003709980.1|	-	0.33	11.0	0.0	1.4	9.0	0.0	2.1	2	0	0	2	2	2	0	GDSL-like	Lipase/Acylhydrolase	family
tRNA-synt_2b	PF00587.20	gi|297621844|ref|YP_003709981.1|	-	8.9e-37	126.3	0.0	1.5e-36	125.6	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.17	gi|297621844|ref|YP_003709981.1|	-	1.1e-25	89.7	2.8	1.7e-25	89.1	1.9	1.3	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
Tropomyosin_1	PF12718.2	gi|297621844|ref|YP_003709981.1|	-	0.016	15.0	0.8	0.027	14.3	0.6	1.3	1	0	0	1	1	1	0	Tropomyosin	like
DUF4201	PF13870.1	gi|297621844|ref|YP_003709981.1|	-	0.034	13.5	1.2	0.068	12.6	0.8	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4201)
TBPIP	PF07106.8	gi|297621844|ref|YP_003709981.1|	-	0.043	13.3	0.3	0.085	12.3	0.2	1.4	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
AKNA	PF12443.3	gi|297621844|ref|YP_003709981.1|	-	0.1	12.6	0.3	0.21	11.6	0.2	1.5	1	0	0	1	1	1	0	AT-hook-containing	transcription	factor
GAS	PF13851.1	gi|297621844|ref|YP_003709981.1|	-	0.14	11.3	3.2	0.23	10.6	2.2	1.2	1	0	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
DUF724	PF05266.9	gi|297621844|ref|YP_003709981.1|	-	0.14	11.7	2.0	0.24	11.0	1.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
ALIX_LYPXL_bnd	PF13949.1	gi|297621844|ref|YP_003709981.1|	-	0.76	8.6	4.1	1.5	7.7	2.9	1.5	1	1	0	1	1	1	0	ALIX	V-shaped	domain	binding	to	HIV
CENP-F_leu_zip	PF10473.4	gi|297621844|ref|YP_003709981.1|	-	0.82	9.5	5.5	0.31	10.9	0.8	2.1	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
TMF_DNA_bd	PF12329.3	gi|297621844|ref|YP_003709981.1|	-	1.9	8.3	6.8	0.082	12.7	0.4	1.8	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
DUF3094	PF11293.3	gi|297621846|ref|YP_003709983.1|	-	0.17	11.3	0.7	0.54	9.7	0.2	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3094)
VIT1	PF01988.14	gi|297621847|ref|YP_003709984.1|	-	2.8e-18	66.1	0.3	5.6e-18	65.2	0.0	1.5	1	1	1	2	2	2	1	VIT	family
E1-E2_ATPase	PF00122.15	gi|297621848|ref|YP_003709985.1|	-	1.8e-44	151.4	0.4	1.8e-44	151.4	0.3	2.1	2	0	0	2	2	2	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|297621848|ref|YP_003709985.1|	-	1.6e-40	139.8	0.0	8.1e-40	137.5	0.0	1.9	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|297621848|ref|YP_003709985.1|	-	1.8e-14	54.3	0.0	3.8e-14	53.3	0.0	1.6	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|297621848|ref|YP_003709985.1|	-	0.069	12.7	0.1	0.35	10.4	0.2	2.0	2	0	0	2	2	2	0	haloacid	dehalogenase-like	hydrolase
ELFV_dehydrog	PF00208.16	gi|297621849|ref|YP_003709986.1|	-	8e-31	107.4	0.0	1.6e-30	106.4	0.0	1.5	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Bac_GDH	PF05088.7	gi|297621849|ref|YP_003709986.1|	-	5.8e-24	83.7	0.0	1.4e-13	49.3	0.0	3.2	3	0	0	3	3	3	3	Bacterial	NAD-glutamate	dehydrogenase
cwf21	PF08312.7	gi|297621849|ref|YP_003709986.1|	-	0.026	14.3	3.2	0.058	13.2	0.7	2.5	2	0	0	2	2	2	0	cwf21	domain
DUF2018	PF09442.5	gi|297621849|ref|YP_003709986.1|	-	0.056	14.0	2.1	1.7	9.2	0.2	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF2018)
HrcA	PF01628.16	gi|297621850|ref|YP_003709987.1|	-	1.1e-36	126.5	0.0	1.9e-36	125.7	0.0	1.4	1	0	0	1	1	1	1	HrcA	protein	C	terminal	domain
HrcA_DNA-bdg	PF03444.10	gi|297621850|ref|YP_003709987.1|	-	0.065	12.6	0.0	0.14	11.5	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
HTH_DeoR	PF08220.7	gi|297621850|ref|YP_003709987.1|	-	0.11	12.0	0.0	0.32	10.5	0.0	1.8	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
GrpE	PF01025.14	gi|297621851|ref|YP_003709988.1|	-	3.4e-48	163.3	0.7	4.4e-48	162.9	0.5	1.1	1	0	0	1	1	1	1	GrpE
Peptidase_S64	PF08192.6	gi|297621851|ref|YP_003709988.1|	-	0.011	14.1	0.2	0.013	13.8	0.2	1.1	1	0	0	1	1	1	0	Peptidase	family	S64
Mating_N	PF12731.2	gi|297621851|ref|YP_003709988.1|	-	0.11	12.3	0.2	0.52	10.2	0.1	2.0	1	1	1	2	2	2	0	Mating-type	protein	beta	1
Connexin43	PF03508.8	gi|297621851|ref|YP_003709988.1|	-	0.24	10.6	1.3	0.42	9.9	0.9	1.3	1	0	0	1	1	1	0	Gap	junction	alpha-1	protein	(Cx43)
HSP70	PF00012.15	gi|297621852|ref|YP_003709989.1|	-	1.7e-264	878.3	11.3	1.9e-264	878.1	7.8	1.0	1	0	0	1	1	1	1	Hsp70	protein
MreB_Mbl	PF06723.8	gi|297621852|ref|YP_003709989.1|	-	7e-17	61.0	2.1	1.5e-14	53.3	0.5	2.6	2	0	0	2	2	2	2	MreB/Mbl	protein
FGGY_C	PF02782.11	gi|297621852|ref|YP_003709989.1|	-	7.1e-05	22.5	0.1	0.00019	21.1	0.0	1.8	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
FtsA	PF14450.1	gi|297621852|ref|YP_003709989.1|	-	0.0016	18.2	9.7	0.21	11.4	4.3	4.7	2	1	0	2	2	2	1	Cell	division	protein	FtsA
Hydantoinase_A	PF01968.13	gi|297621852|ref|YP_003709989.1|	-	0.018	14.1	5.1	0.11	11.5	0.0	3.1	3	0	0	3	3	3	0	Hydantoinase/oxoprolinase
TPP_enzyme_N	PF02776.13	gi|297621853|ref|YP_003709990.1|	-	2.1e-35	121.7	0.0	9.5e-35	119.6	0.0	2.0	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|297621853|ref|YP_003709990.1|	-	1.1e-26	93.2	0.3	3e-26	91.8	0.0	1.9	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|297621853|ref|YP_003709990.1|	-	1.5e-23	83.0	0.0	5e-23	81.3	0.0	1.9	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
CO_dh	PF02552.11	gi|297621853|ref|YP_003709990.1|	-	0.042	13.3	0.0	0.084	12.4	0.0	1.5	1	0	0	1	1	1	0	CO	dehydrogenase	beta	subunit/acetyl-CoA	synthase	epsilon	subunit
AAA_5	PF07728.9	gi|297621853|ref|YP_003709990.1|	-	0.12	12.0	0.0	0.3	10.8	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
DUF998	PF06197.8	gi|297621854|ref|YP_003709991.1|	-	0.41	9.9	7.0	0.66	9.2	4.8	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF998)
Peptidase_S66	PF02016.10	gi|297621855|ref|YP_003709992.1|	-	9.1e-94	313.5	0.0	1e-93	313.3	0.0	1.0	1	0	0	1	1	1	1	LD-carboxypeptidase
HTH_36	PF13730.1	gi|297621855|ref|YP_003709992.1|	-	0.069	13.2	0.0	0.72	10.0	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF202	PF02656.10	gi|297621856|ref|YP_003709993.1|	-	3.8e-12	46.2	1.7	3.8e-12	46.2	1.2	2.1	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF202)
Tetraspannin	PF00335.15	gi|297621856|ref|YP_003709993.1|	-	9.6	5.4	7.4	13	5.0	5.2	1.2	1	0	0	1	1	1	0	Tetraspanin	family
FKBP_C	PF00254.23	gi|297621857|ref|YP_003709994.1|	-	3.8e-21	74.8	0.0	2.5e-20	72.2	0.0	2.0	2	0	0	2	2	2	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
FKBP_N	PF01346.13	gi|297621857|ref|YP_003709994.1|	-	1.2e-10	41.4	0.6	1.2e-10	41.4	0.4	1.6	2	0	0	2	2	2	1	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
Peptidase_S49	PF01343.13	gi|297621858|ref|YP_003709995.1|	-	3.1e-29	101.7	0.0	5.5e-29	100.9	0.0	1.4	1	0	0	1	1	1	1	Peptidase	family	S49
CLP_protease	PF00574.18	gi|297621858|ref|YP_003709995.1|	-	2.4e-06	27.3	0.1	4.9e-06	26.3	0.1	1.6	1	0	0	1	1	1	1	Clp	protease
SDH_sah	PF01972.11	gi|297621858|ref|YP_003709995.1|	-	0.004	15.9	0.0	0.0066	15.2	0.0	1.3	1	0	0	1	1	1	1	Serine	dehydrogenase	proteinase
ECH	PF00378.15	gi|297621858|ref|YP_003709995.1|	-	0.0056	15.8	0.2	0.011	14.8	0.1	1.5	1	1	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
UPF0118	PF01594.11	gi|297621858|ref|YP_003709995.1|	-	0.076	11.9	0.1	0.11	11.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF20
DNA_pol_A	PF00476.15	gi|297621859|ref|YP_003709996.1|	-	6.3e-117	390.4	0.0	8.6e-117	389.9	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	family	A
5_3_exonuc_N	PF02739.11	gi|297621859|ref|YP_003709996.1|	-	2.3e-51	173.5	0.0	6e-51	172.1	0.0	1.8	2	0	0	2	2	2	1	5'-3'	exonuclease,	N-terminal	resolvase-like	domain
DNA_pol_A_exo1	PF01612.15	gi|297621859|ref|YP_003709996.1|	-	4.7e-30	104.3	0.1	8.3e-30	103.5	0.1	1.4	1	0	0	1	1	1	1	3'-5'	exonuclease
5_3_exonuc	PF01367.15	gi|297621859|ref|YP_003709996.1|	-	2.8e-23	82.0	0.0	1.1e-22	80.1	0.0	2.2	1	0	0	1	1	1	1	5'-3'	exonuclease,	C-terminal	SAM	fold
RNase_H_2	PF13482.1	gi|297621859|ref|YP_003709996.1|	-	0.0025	17.6	0.1	0.061	13.1	0.1	2.9	2	1	0	2	2	2	1	RNase_H	superfamily
HHH_2	PF12826.2	gi|297621859|ref|YP_003709996.1|	-	0.042	13.7	0.1	2	8.3	0.0	3.2	3	0	0	3	3	3	0	Helix-hairpin-helix	motif
XPG_N	PF00752.12	gi|297621859|ref|YP_003709996.1|	-	0.06	13.6	0.0	0.32	11.2	0.0	2.4	1	0	0	1	1	1	0	XPG	N-terminal	domain
DUF3073	PF11273.3	gi|297621859|ref|YP_003709996.1|	-	0.061	13.8	1.5	5	7.7	0.3	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3073)
CoaE	PF01121.15	gi|297621860|ref|YP_003709997.1|	-	1.3e-38	132.2	0.0	1.5e-38	131.9	0.0	1.0	1	0	0	1	1	1	1	Dephospho-CoA	kinase
AAA_17	PF13207.1	gi|297621860|ref|YP_003709997.1|	-	0.014	16.2	0.1	0.02	15.7	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|297621861|ref|YP_003709998.1|	-	4.7e-44	150.4	0.0	6.4e-44	150.0	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Rho_RNA_bind	PF07497.7	gi|297621861|ref|YP_003709998.1|	-	2.3e-38	129.6	0.0	4.6e-38	128.6	0.0	1.5	1	0	0	1	1	1	1	Rho	termination	factor,	RNA-binding	domain
Rho_N	PF07498.7	gi|297621861|ref|YP_003709998.1|	-	2.8e-09	36.5	0.0	1.2e-08	34.5	0.0	2.1	2	0	0	2	2	2	1	Rho	termination	factor,	N-terminal	domain
AAA_25	PF13481.1	gi|297621861|ref|YP_003709998.1|	-	0.00028	20.3	0.1	0.0011	18.3	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|297621861|ref|YP_003709998.1|	-	0.00046	20.3	0.0	0.0011	19.1	0.0	1.7	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
OB_RNB	PF08206.6	gi|297621861|ref|YP_003709998.1|	-	0.0039	16.6	0.0	0.0079	15.6	0.0	1.5	1	0	0	1	1	1	1	Ribonuclease	B	OB	domain
AAA_22	PF13401.1	gi|297621861|ref|YP_003709998.1|	-	0.0092	16.1	0.1	0.027	14.5	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|297621861|ref|YP_003709998.1|	-	0.028	14.0	0.0	0.057	13.0	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_19	PF13245.1	gi|297621861|ref|YP_003709998.1|	-	0.033	13.9	0.0	0.087	12.5	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|297621861|ref|YP_003709998.1|	-	0.071	12.5	0.0	0.14	11.5	0.0	1.6	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
XisI	PF08869.6	gi|297621862|ref|YP_003709999.1|	-	0.12	12.5	0.1	0.34	11.0	0.0	1.8	1	1	1	2	2	2	0	XisI	protein
GTP1_OBG	PF01018.17	gi|297621863|ref|YP_003710000.1|	-	3.2e-61	205.5	1.7	4.2e-61	205.1	1.2	1.1	1	0	0	1	1	1	1	GTP1/OBG
MMR_HSR1	PF01926.18	gi|297621863|ref|YP_003710000.1|	-	7e-21	74.3	0.0	1e-20	73.8	0.0	1.2	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|297621863|ref|YP_003710000.1|	-	3.7e-11	42.5	0.0	1.3e-10	40.7	0.0	1.8	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
Arf	PF00025.16	gi|297621863|ref|YP_003710000.1|	-	0.0021	17.3	0.0	0.0059	15.8	0.0	1.7	1	1	0	1	1	1	1	ADP-ribosylation	factor	family
ArgK	PF03308.11	gi|297621863|ref|YP_003710000.1|	-	0.0048	15.7	0.0	0.066	11.9	0.0	2.2	2	0	0	2	2	2	1	ArgK	protein
NOG1	PF06858.9	gi|297621863|ref|YP_003710000.1|	-	0.007	16.2	0.0	0.014	15.2	0.0	1.5	1	0	0	1	1	1	1	Nucleolar	GTP-binding	protein	1	(NOG1)
Miro	PF08477.8	gi|297621863|ref|YP_003710000.1|	-	0.0079	16.6	0.0	0.028	14.9	0.0	2.0	1	1	1	2	2	2	1	Miro-like	protein
Gtr1_RagA	PF04670.7	gi|297621863|ref|YP_003710000.1|	-	0.0085	15.2	0.0	0.013	14.6	0.0	1.2	1	0	0	1	1	1	1	Gtr1/RagA	G	protein	conserved	region
Dynamin_N	PF00350.18	gi|297621863|ref|YP_003710000.1|	-	0.032	14.0	0.1	2.9	7.6	0.1	2.2	1	1	1	2	2	2	0	Dynamin	family
GTP_EFTU	PF00009.22	gi|297621863|ref|YP_003710000.1|	-	0.055	12.9	0.0	5.1	6.4	0.0	2.3	2	0	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
cobW	PF02492.14	gi|297621863|ref|YP_003710000.1|	-	0.079	12.4	0.0	3	7.2	0.0	2.2	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
MobB	PF03205.9	gi|297621863|ref|YP_003710000.1|	-	0.079	12.6	0.0	0.14	11.8	0.0	1.3	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
PduV-EutP	PF10662.4	gi|297621863|ref|YP_003710000.1|	-	0.08	12.4	0.0	1.4	8.4	0.0	2.1	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
ABC_tran	PF00005.22	gi|297621863|ref|YP_003710000.1|	-	0.11	12.8	0.2	0.38	11.0	0.1	1.9	2	0	0	2	2	2	0	ABC	transporter
Ribosomal_L27	PF01016.14	gi|297621864|ref|YP_003710001.1|	-	4.6e-37	125.6	2.8	5.1e-37	125.5	1.9	1.0	1	0	0	1	1	1	1	Ribosomal	L27	protein
DUF342	PF03961.8	gi|297621864|ref|YP_003710001.1|	-	0.063	11.6	0.0	0.072	11.5	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
Ribosomal_L21p	PF00829.16	gi|297621865|ref|YP_003710002.1|	-	5.5e-32	109.7	0.0	5.5e-32	109.7	0.0	1.8	2	0	0	2	2	2	1	Ribosomal	prokaryotic	L21	protein
2-Hacid_dh_C	PF02826.14	gi|297621866|ref|YP_003710003.1|	-	5.3e-28	97.3	0.0	7.2e-28	96.9	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|297621866|ref|YP_003710003.1|	-	0.0027	17.5	0.0	0.0048	16.7	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.7	gi|297621866|ref|YP_003710003.1|	-	0.046	13.0	0.0	0.15	11.4	0.0	1.8	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
YfmQ	PF10787.4	gi|297621866|ref|YP_003710003.1|	-	0.055	12.8	0.1	1.2	8.4	0.0	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	from	bacillus	cereus	group
NAD_binding_10	PF13460.1	gi|297621866|ref|YP_003710003.1|	-	0.078	12.9	0.0	0.13	12.2	0.0	1.2	1	0	0	1	1	1	0	NADH(P)-binding
IMPDH	PF00478.20	gi|297621868|ref|YP_003710005.1|	-	5.1e-124	413.7	0.0	6.1e-124	413.4	0.0	1.0	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
NMO	PF03060.10	gi|297621868|ref|YP_003710005.1|	-	2.4e-17	63.1	1.0	1.1e-10	41.1	0.6	2.1	2	0	0	2	2	2	2	Nitronate	monooxygenase
CBS	PF00571.23	gi|297621868|ref|YP_003710005.1|	-	7.9e-13	47.9	0.0	2.4e-05	24.0	0.0	2.7	2	0	0	2	2	2	2	CBS	domain
FMN_dh	PF01070.13	gi|297621868|ref|YP_003710005.1|	-	8.4e-11	41.3	1.6	1.5e-10	40.4	1.1	1.4	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
His_biosynth	PF00977.16	gi|297621868|ref|YP_003710005.1|	-	1e-05	24.9	0.6	0.00082	18.7	0.1	2.3	1	1	1	2	2	2	1	Histidine	biosynthesis	protein
ThiG	PF05690.9	gi|297621868|ref|YP_003710005.1|	-	1.1e-05	24.6	0.9	2.2e-05	23.6	0.6	1.5	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
Glu_synthase	PF01645.12	gi|297621868|ref|YP_003710005.1|	-	0.00046	19.2	2.4	0.00075	18.5	1.7	1.2	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
DeoC	PF01791.4	gi|297621868|ref|YP_003710005.1|	-	0.00059	19.1	0.8	0.0012	18.2	0.6	1.4	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
Response_reg	PF00072.19	gi|297621868|ref|YP_003710005.1|	-	0.02	14.9	0.1	0.75	9.8	0.0	2.6	2	0	0	2	2	2	0	Response	regulator	receiver	domain
PcrB	PF01884.12	gi|297621868|ref|YP_003710005.1|	-	0.02	14.1	1.3	4	6.6	0.1	2.4	1	1	0	2	2	2	0	PcrB	family
DHO_dh	PF01180.16	gi|297621868|ref|YP_003710005.1|	-	0.026	13.4	1.4	0.047	12.6	0.3	1.8	1	1	1	2	2	2	0	Dihydroorotate	dehydrogenase
DUF561	PF04481.7	gi|297621868|ref|YP_003710005.1|	-	0.051	12.5	0.4	0.091	11.7	0.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF561)
NanE	PF04131.9	gi|297621868|ref|YP_003710005.1|	-	0.061	12.2	0.3	0.12	11.3	0.2	1.4	1	0	0	1	1	1	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
IGPS	PF00218.16	gi|297621868|ref|YP_003710005.1|	-	0.069	12.1	0.0	2.4	7.1	0.0	2.7	3	0	0	3	3	3	0	Indole-3-glycerol	phosphate	synthase
Dus	PF01207.12	gi|297621868|ref|YP_003710005.1|	-	0.091	11.5	0.1	0.21	10.3	0.0	1.5	1	1	0	1	1	1	0	Dihydrouridine	synthase	(Dus)
AICARFT_IMPCHas	PF01808.13	gi|297621869|ref|YP_003710006.1|	-	4.5e-60	203.3	0.1	5.8e-60	203.0	0.1	1.1	1	0	0	1	1	1	1	AICARFT/IMPCHase	bienzyme
MGS	PF02142.17	gi|297621869|ref|YP_003710006.1|	-	1.1e-14	54.1	0.0	2.4e-14	53.0	0.0	1.6	1	0	0	1	1	1	1	MGS-like	domain
BING4CT	PF08149.6	gi|297621869|ref|YP_003710006.1|	-	0.067	12.7	0.0	5.2	6.6	0.0	2.9	2	0	0	2	2	2	0	BING4CT	(NUC141)	domain
TIM	PF00121.13	gi|297621871|ref|YP_003710008.1|	-	3.4e-15	55.7	0.0	9.8e-11	41.1	0.0	2.4	2	0	0	2	2	2	2	Triosephosphate	isomerase
TPR_11	PF13414.1	gi|297621871|ref|YP_003710008.1|	-	2.7e-05	23.7	1.7	0.00045	19.8	0.2	2.7	1	1	1	2	2	2	1	TPR	repeat
TPR_19	PF14559.1	gi|297621871|ref|YP_003710008.1|	-	2.8e-05	24.3	0.1	0.00046	20.4	0.0	2.5	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297621871|ref|YP_003710008.1|	-	0.00037	20.1	0.5	0.34	10.9	0.0	3.3	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297621871|ref|YP_003710008.1|	-	0.00041	20.2	1.0	0.21	11.5	0.0	3.5	2	1	1	3	3	3	1	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297621871|ref|YP_003710008.1|	-	0.039	14.0	0.2	2.7	8.1	0.0	2.8	2	0	0	2	2	2	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_16	PF13432.1	gi|297621871|ref|YP_003710008.1|	-	0.053	14.2	0.0	3.1	8.5	0.0	2.6	1	1	2	3	3	3	0	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|297621871|ref|YP_003710008.1|	-	0.14	12.4	0.1	0.66	10.3	0.0	2.3	2	0	0	2	2	1	0	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|297621871|ref|YP_003710008.1|	-	0.2	12.1	1.7	6	7.5	0.0	3.3	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297621871|ref|YP_003710008.1|	-	0.25	11.1	5.2	3.5	7.6	0.0	4.4	4	1	1	5	5	5	0	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|297621871|ref|YP_003710008.1|	-	0.25	11.0	1.4	8.7	6.1	0.0	3.0	3	0	0	3	3	3	0	Tetratricopeptide	repeat
GMP_synt_C	PF00958.17	gi|297621872|ref|YP_003710009.1|	-	1.2e-39	133.8	0.0	2.1e-39	133.1	0.0	1.4	1	0	0	1	1	1	1	GMP	synthase	C	terminal	domain
GATase	PF00117.23	gi|297621872|ref|YP_003710009.1|	-	2e-38	131.8	0.0	3.7e-38	130.9	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|297621872|ref|YP_003710009.1|	-	4.4e-12	45.9	0.1	1.2e-11	44.4	0.1	1.7	1	1	0	1	1	1	1	Peptidase	C26
NAD_synthase	PF02540.12	gi|297621872|ref|YP_003710009.1|	-	6.4e-08	31.7	0.0	1.1e-05	24.5	0.0	2.2	2	0	0	2	2	2	2	NAD	synthase
Asn_synthase	PF00733.16	gi|297621872|ref|YP_003710009.1|	-	0.005	16.3	0.0	0.0083	15.6	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
ThiI	PF02568.9	gi|297621872|ref|YP_003710009.1|	-	0.042	13.2	0.0	0.069	12.6	0.0	1.4	1	0	0	1	1	1	0	Thiamine	biosynthesis	protein	(ThiI)
QueC	PF06508.8	gi|297621872|ref|YP_003710009.1|	-	0.11	11.7	0.0	0.18	11.0	0.0	1.3	1	0	0	1	1	1	0	Queuosine	biosynthesis	protein	QueC
Peptidase_M24	PF00557.19	gi|297621873|ref|YP_003710010.1|	-	5.9e-35	120.7	0.0	6.7e-35	120.5	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Peptidase_S41	PF03572.13	gi|297621878|ref|YP_003710015.1|	-	1.9e-41	141.2	2.1	3.6e-41	140.3	1.5	1.5	1	0	0	1	1	1	1	Peptidase	family	S41
PDZ	PF00595.19	gi|297621878|ref|YP_003710015.1|	-	5.1e-13	48.9	2.4	5.1e-13	48.9	1.6	1.9	2	0	0	2	2	2	1	PDZ	domain	(Also	known	as	DHR	or	GLGF)
PDZ_2	PF13180.1	gi|297621878|ref|YP_003710015.1|	-	1.8e-10	40.5	3.6	2.2e-10	40.2	1.5	2.0	2	0	0	2	2	2	1	PDZ	domain
DUF3340	PF11818.3	gi|297621878|ref|YP_003710015.1|	-	0.00083	19.3	1.2	0.41	10.5	0.2	3.1	2	1	0	2	2	2	2	C-terminal	domain	of	tail	specific	protease	(DUF3340)
Tricorn_PDZ	PF14685.1	gi|297621878|ref|YP_003710015.1|	-	0.059	13.1	0.1	0.18	11.6	0.1	1.8	1	0	0	1	1	1	0	Tricorn	protease	PDZ	domain
ScpA_ScpB	PF02616.9	gi|297621879|ref|YP_003710016.1|	-	5.9e-23	81.7	5.8	7.9e-23	81.2	4.0	1.1	1	0	0	1	1	1	1	ScpA/B	protein
DUF387	PF04079.11	gi|297621880|ref|YP_003710017.1|	-	1.2e-54	183.9	0.1	1.4e-54	183.7	0.0	1.0	1	0	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
DUF2087	PF09860.4	gi|297621880|ref|YP_003710017.1|	-	0.073	12.8	0.2	0.14	11.9	0.1	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2087)
Arteri_Gl	PF00951.13	gi|297621880|ref|YP_003710017.1|	-	0.11	12.1	0.0	0.17	11.4	0.0	1.3	1	0	0	1	1	1	0	Arterivirus	GL	envelope	glycoprotein
TrkH	PF02386.11	gi|297621882|ref|YP_003710019.1|	-	2.9e-45	154.3	31.4	1.5e-43	148.7	20.2	2.2	2	0	0	2	2	2	2	Cation	transport	protein
ABC-3	PF00950.12	gi|297621883|ref|YP_003710020.1|	-	2.3e-44	151.6	36.2	3.6e-44	150.9	25.1	1.2	1	0	0	1	1	1	1	ABC	3	transport	family
FecCD	PF01032.13	gi|297621883|ref|YP_003710020.1|	-	1.6e-06	27.1	38.8	1.6e-06	27.1	26.9	1.9	1	1	1	2	2	2	1	FecCD	transport	family
Fun_ATP-synt_8	PF05933.8	gi|297621883|ref|YP_003710020.1|	-	0.083	12.9	0.2	0.083	12.9	0.1	3.0	4	0	0	4	4	4	0	Fungal	ATP	synthase	protein	8	(A6L)
ABC-3	PF00950.12	gi|297621884|ref|YP_003710021.1|	-	1.9e-49	168.2	25.5	4.9e-49	166.9	17.7	1.6	1	1	0	1	1	1	1	ABC	3	transport	family
Fe_dep_repr_C	PF02742.10	gi|297621884|ref|YP_003710021.1|	-	1.6e-23	82.1	0.5	1.6e-23	82.1	0.3	1.6	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
FecCD	PF01032.13	gi|297621884|ref|YP_003710021.1|	-	6.3e-12	44.9	24.0	8.1e-12	44.5	16.3	1.5	1	1	1	2	2	2	1	FecCD	transport	family
ABC_tran	PF00005.22	gi|297621885|ref|YP_003710022.1|	-	3.1e-30	105.2	0.0	4.4e-30	104.7	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297621885|ref|YP_003710022.1|	-	5.8e-11	42.8	0.0	1.6e-05	25.0	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|297621885|ref|YP_003710022.1|	-	3.5e-05	23.1	0.2	0.11	11.6	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|297621885|ref|YP_003710022.1|	-	0.0017	17.8	0.0	0.0034	16.8	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|297621885|ref|YP_003710022.1|	-	0.007	16.7	0.2	0.014	15.7	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
SbcCD_C	PF13558.1	gi|297621885|ref|YP_003710022.1|	-	0.008	16.0	0.1	0.097	12.6	0.1	2.3	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_15	PF13175.1	gi|297621885|ref|YP_003710022.1|	-	0.013	14.6	0.0	0.9	8.5	0.0	2.1	2	0	0	2	2	2	0	AAA	ATPase	domain
MobB	PF03205.9	gi|297621885|ref|YP_003710022.1|	-	0.018	14.7	0.9	0.21	11.2	0.1	2.2	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Arch_ATPase	PF01637.13	gi|297621885|ref|YP_003710022.1|	-	0.026	14.2	0.0	0.075	12.7	0.0	1.7	2	0	0	2	2	2	0	Archaeal	ATPase
NTPase_1	PF03266.10	gi|297621885|ref|YP_003710022.1|	-	0.028	14.1	0.2	0.96	9.1	0.0	2.2	2	0	0	2	2	2	0	NTPase
Miro	PF08477.8	gi|297621885|ref|YP_003710022.1|	-	0.045	14.2	0.0	0.11	12.9	0.0	1.7	1	0	0	1	1	1	0	Miro-like	protein
AAA_25	PF13481.1	gi|297621885|ref|YP_003710022.1|	-	0.054	12.8	0.0	0.054	12.8	0.0	2.2	3	0	0	3	3	2	0	AAA	domain
AAA_24	PF13479.1	gi|297621885|ref|YP_003710022.1|	-	0.061	12.9	0.3	0.14	11.7	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.1	gi|297621885|ref|YP_003710022.1|	-	0.071	13.0	0.1	1.7	8.5	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.1	gi|297621885|ref|YP_003710022.1|	-	0.1	12.4	0.0	0.21	11.4	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
cobW	PF02492.14	gi|297621885|ref|YP_003710022.1|	-	0.11	11.9	0.4	0.19	11.1	0.3	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_19	PF13245.1	gi|297621885|ref|YP_003710022.1|	-	0.12	12.1	0.4	0.23	11.2	0.1	1.6	2	0	0	2	2	1	0	Part	of	AAA	domain
ATP_bind_1	PF03029.12	gi|297621885|ref|YP_003710022.1|	-	0.12	11.8	0.0	0.33	10.4	0.0	1.7	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_17	PF13207.1	gi|297621885|ref|YP_003710022.1|	-	0.4	11.5	1.4	0.97	10.2	0.5	1.9	2	0	0	2	2	2	0	AAA	domain
TroA	PF01297.12	gi|297621886|ref|YP_003710023.1|	-	1.3e-52	178.6	0.0	1.5e-52	178.3	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	solute	binding	protein	family
Microtub_assoc	PF07989.6	gi|297621886|ref|YP_003710023.1|	-	0.1	12.4	0.0	0.21	11.4	0.0	1.5	1	0	0	1	1	1	0	Microtubule	associated
DUF971	PF06155.7	gi|297621887|ref|YP_003710024.1|	-	9.9e-20	70.7	0.0	1.2e-19	70.5	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF971)
DUF2442	PF10387.4	gi|297621887|ref|YP_003710024.1|	-	0.00075	19.4	0.1	0.024	14.6	0.0	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2442)
ParA	PF10609.4	gi|297621888|ref|YP_003710025.1|	-	2.6e-31	107.3	0.3	4.3e-31	106.6	0.2	1.4	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
CbiA	PF01656.18	gi|297621888|ref|YP_003710025.1|	-	2.8e-20	72.5	0.0	4.8e-20	71.7	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MipZ	PF09140.6	gi|297621888|ref|YP_003710025.1|	-	6e-09	35.3	0.0	8.4e-09	34.8	0.0	1.2	1	0	0	1	1	1	1	ATPase	MipZ
AAA_31	PF13614.1	gi|297621888|ref|YP_003710025.1|	-	1.5e-07	31.4	0.0	3.4e-07	30.3	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|297621888|ref|YP_003710025.1|	-	1.1e-05	24.6	2.8	0.00035	19.7	0.2	2.6	2	1	0	2	2	2	1	Anion-transporting	ATPase
Fer4_NifH	PF00142.13	gi|297621888|ref|YP_003710025.1|	-	6.8e-05	22.1	0.0	0.0046	16.1	0.0	2.2	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_26	PF13500.1	gi|297621888|ref|YP_003710025.1|	-	7.1e-05	22.5	0.1	0.26	10.8	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
VirC1	PF07015.6	gi|297621888|ref|YP_003710025.1|	-	0.0027	16.8	0.1	0.0049	15.9	0.0	1.4	1	0	0	1	1	1	1	VirC1	protein
APS_kinase	PF01583.15	gi|297621888|ref|YP_003710025.1|	-	0.0093	15.6	0.0	0.014	15.0	0.0	1.4	1	0	0	1	1	1	1	Adenylylsulphate	kinase
MobB	PF03205.9	gi|297621888|ref|YP_003710025.1|	-	0.013	15.1	0.0	0.026	14.2	0.0	1.6	2	0	0	2	2	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_25	PF13481.1	gi|297621888|ref|YP_003710025.1|	-	0.026	13.9	0.1	0.054	12.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|297621888|ref|YP_003710025.1|	-	0.045	14.0	0.0	0.07	13.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|297621888|ref|YP_003710025.1|	-	0.053	13.2	0.1	4	7.2	0.1	2.3	2	0	0	2	2	2	0	Part	of	AAA	domain
SIS_2	PF13580.1	gi|297621888|ref|YP_003710025.1|	-	0.067	12.8	0.1	3.9	7.1	0.0	2.8	2	1	1	3	3	3	0	SIS	domain
SRP54	PF00448.17	gi|297621888|ref|YP_003710025.1|	-	0.068	12.5	0.2	0.14	11.5	0.1	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
ArgK	PF03308.11	gi|297621888|ref|YP_003710025.1|	-	0.075	11.8	0.1	0.12	11.1	0.1	1.2	1	0	0	1	1	1	0	ArgK	protein
YhjQ	PF06564.7	gi|297621888|ref|YP_003710025.1|	-	0.16	11.3	0.3	1.2	8.4	0.1	2.0	2	0	0	2	2	2	0	YhjQ	protein
DUF939_C	PF11728.3	gi|297621889|ref|YP_003710026.1|	-	0.059	13.1	0.2	0.13	12.0	0.0	1.6	2	1	0	2	2	2	0	DUF939	C-terminal	domain
CO_dh	PF02552.11	gi|297621889|ref|YP_003710026.1|	-	0.073	12.6	0.3	0.23	11.0	0.0	1.8	1	1	1	2	2	2	0	CO	dehydrogenase	beta	subunit/acetyl-CoA	synthase	epsilon	subunit
TLC	PF03219.9	gi|297621891|ref|YP_003710028.1|	-	8.4e-215	713.8	24.8	9.5e-215	713.6	17.2	1.0	1	0	0	1	1	1	1	TLC	ATP/ADP	transporter
SecD_SecF	PF02355.11	gi|297621893|ref|YP_003710030.1|	-	1.8e-78	262.0	31.7	1.3e-60	203.8	11.2	2.4	2	0	0	2	2	2	2	Protein	export	membrane	protein
MMPL	PF03176.10	gi|297621893|ref|YP_003710030.1|	-	2.1e-06	26.7	14.3	2.1e-06	26.7	9.9	2.5	2	0	0	2	2	2	1	MMPL	family
Sec_GG	PF07549.9	gi|297621893|ref|YP_003710030.1|	-	0.00065	18.7	0.5	0.2	10.9	0.1	2.7	2	0	0	2	2	2	2	SecD/SecF	GG	Motif
DHH	PF01368.15	gi|297621894|ref|YP_003710031.1|	-	3.1e-20	72.3	0.3	5.9e-20	71.3	0.2	1.5	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.14	gi|297621894|ref|YP_003710031.1|	-	2.1e-13	49.7	0.0	4.2e-13	48.8	0.0	1.5	1	0	0	1	1	1	1	DHHA1	domain
Toprim	PF01751.17	gi|297621894|ref|YP_003710031.1|	-	0.012	15.5	0.0	0.045	13.7	0.0	2.0	1	0	0	1	1	1	0	Toprim	domain
HTH_17	PF12728.2	gi|297621896|ref|YP_003710033.1|	-	9.1e-18	64.2	2.5	1.5e-09	37.9	0.0	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain
MerR_1	PF13411.1	gi|297621896|ref|YP_003710033.1|	-	0.00023	20.8	0.6	0.4	10.4	0.0	2.5	2	1	0	2	2	2	2	MerR	HTH	family	regulatory	protein
HTH_23	PF13384.1	gi|297621896|ref|YP_003710033.1|	-	0.00075	19.0	0.0	0.057	13.0	0.0	2.5	2	0	0	2	2	2	1	Homeodomain-like	domain
MerR	PF00376.18	gi|297621896|ref|YP_003710033.1|	-	0.00077	18.9	0.0	0.33	10.5	0.0	3.0	3	0	0	3	3	3	2	MerR	family	regulatory	protein
HTH_28	PF13518.1	gi|297621896|ref|YP_003710033.1|	-	0.00092	19.1	0.9	0.036	14.0	0.0	2.8	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_Tnp_IS630	PF01710.11	gi|297621896|ref|YP_003710033.1|	-	0.0019	17.8	2.3	0.003	17.1	1.4	1.6	1	1	1	2	2	2	1	Transposase
HTH_7	PF02796.10	gi|297621896|ref|YP_003710033.1|	-	0.01	15.6	0.6	1.5	8.7	0.0	2.7	2	1	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
GIDA_assoc_3	PF13932.1	gi|297621896|ref|YP_003710033.1|	-	0.089	12.8	0.0	0.2	11.7	0.0	1.6	1	0	0	1	1	1	0	GidA	associated	domain	3
Peptidase_S41	PF03572.13	gi|297621897|ref|YP_003710034.1|	-	1e-39	135.6	0.3	1.8e-39	134.8	0.2	1.4	1	0	0	1	1	1	1	Peptidase	family	S41
PDZ_2	PF13180.1	gi|297621897|ref|YP_003710034.1|	-	8.5e-12	44.8	1.1	2.7e-11	43.1	0.8	1.9	1	0	0	1	1	1	1	PDZ	domain
PDZ	PF00595.19	gi|297621897|ref|YP_003710034.1|	-	2.8e-10	40.2	0.6	5.7e-10	39.2	0.4	1.5	1	0	0	1	1	1	1	PDZ	domain	(Also	known	as	DHR	or	GLGF)
DUF3340	PF11818.3	gi|297621897|ref|YP_003710034.1|	-	2.8e-05	24.1	10.5	0.13	12.1	0.4	4.5	3	1	1	4	4	4	3	C-terminal	domain	of	tail	specific	protease	(DUF3340)
tRNA-synt_1c	PF00749.16	gi|297621898|ref|YP_003710035.1|	-	6e-115	383.2	0.0	7.7e-115	382.8	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1b	PF00579.20	gi|297621898|ref|YP_003710035.1|	-	0.12	11.5	0.0	2.5	7.1	0.0	2.2	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(W	and	Y)
Raffinose_syn	PF05691.7	gi|297621899|ref|YP_003710036.1|	-	8.2e-19	66.6	1.7	4.9e-09	34.2	0.3	3.5	1	1	2	3	3	3	2	Raffinose	synthase	or	seed	imbibition	protein	Sip1
Melibiase	PF02065.13	gi|297621899|ref|YP_003710036.1|	-	0.0066	15.1	0.0	0.01	14.5	0.0	1.2	1	0	0	1	1	1	1	Melibiase
SNARE_assoc	PF09335.6	gi|297621900|ref|YP_003710037.1|	-	1.5e-13	50.9	11.5	1.8e-13	50.7	4.9	2.4	1	1	1	2	2	2	2	SNARE	associated	Golgi	protein
CoA_binding_3	PF13727.1	gi|297621900|ref|YP_003710037.1|	-	1.6	8.5	6.7	2.9	7.6	0.6	2.3	2	0	0	2	2	2	0	CoA-binding	domain
YrhK	PF14145.1	gi|297621900|ref|YP_003710037.1|	-	1.8	8.2	11.1	44	3.8	0.0	3.7	3	1	0	3	3	3	0	YrhK-like	protein
CDP-OH_P_transf	PF01066.16	gi|297621901|ref|YP_003710038.1|	-	1.9e-14	53.8	13.3	9.5e-14	51.5	9.3	2.0	1	1	0	1	1	1	1	CDP-alcohol	phosphatidyltransferase
IncA	PF04156.9	gi|297621901|ref|YP_003710038.1|	-	0.72	9.4	3.0	1.2	8.6	2.1	1.4	1	0	0	1	1	1	0	IncA	protein
Transposase_mut	PF00872.13	gi|297621902|ref|YP_003710039.1|	-	1.4e-101	339.7	0.0	1.7e-101	339.5	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.4	gi|297621902|ref|YP_003710039.1|	-	1.3e-10	41.3	0.0	4.1e-10	39.6	0.0	1.9	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.1	gi|297621902|ref|YP_003710039.1|	-	0.0091	15.9	0.3	0.11	12.5	0.1	2.6	2	1	1	3	3	3	1	DDE	domain
DNA_methylase	PF00145.12	gi|297621903|ref|YP_003710040.1|	-	2.9e-86	289.6	0.0	3.4e-86	289.4	0.0	1.1	1	0	0	1	1	1	1	C-5	cytosine-specific	DNA	methylase
MerR_1	PF13411.1	gi|297621903|ref|YP_003710040.1|	-	4.2e-05	23.2	0.0	0.00046	19.9	0.0	2.3	2	0	0	2	2	2	1	MerR	HTH	family	regulatory	protein
Phage_Nu1	PF07471.7	gi|297621903|ref|YP_003710040.1|	-	0.09	12.2	0.0	0.16	11.4	0.0	1.4	1	0	0	1	1	1	0	Phage	DNA	packaging	protein	Nu1
MerR	PF00376.18	gi|297621903|ref|YP_003710040.1|	-	0.12	12.0	0.0	0.28	10.7	0.0	1.6	1	0	0	1	1	1	0	MerR	family	regulatory	protein
RE_Eco47II	PF09553.5	gi|297621904|ref|YP_003710041.1|	-	1.2e-65	220.6	4.2	1.5e-65	220.3	2.9	1.1	1	0	0	1	1	1	1	Eco47II	restriction	endonuclease
DUF1312	PF07009.6	gi|297621904|ref|YP_003710041.1|	-	0.13	12.1	2.0	0.13	12.0	0.4	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1312)
Transposase_mut	PF00872.13	gi|297621905|ref|YP_003710042.1|	-	1.6e-64	217.8	0.0	1.8e-64	217.6	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.4	gi|297621905|ref|YP_003710042.1|	-	7.2e-10	38.9	0.0	1.2e-09	38.1	0.0	1.4	1	0	0	1	1	1	1	MULE	transposase	domain
HTH_Tnp_1	PF01527.15	gi|297621906|ref|YP_003710043.1|	-	1.1e-17	63.7	0.1	1.3e-17	63.4	0.1	1.1	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.1	gi|297621906|ref|YP_003710043.1|	-	2.6e-07	30.4	0.0	3.8e-07	29.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297621906|ref|YP_003710043.1|	-	3.4e-06	26.5	0.0	6e-06	25.7	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_29	PF13551.1	gi|297621906|ref|YP_003710043.1|	-	6.8e-05	22.9	0.0	8.7e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_Tnp_IS630	PF01710.11	gi|297621906|ref|YP_003710043.1|	-	0.00012	21.7	0.3	0.00013	21.5	0.2	1.1	1	0	0	1	1	1	1	Transposase
HTH_psq	PF05225.11	gi|297621906|ref|YP_003710043.1|	-	0.0014	18.1	0.0	0.0025	17.3	0.0	1.4	1	0	0	1	1	1	1	helix-turn-helix,	Psq	domain
DUF1153	PF06627.6	gi|297621906|ref|YP_003710043.1|	-	0.0016	18.2	0.1	0.0028	17.4	0.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1153)
HTH_17	PF12728.2	gi|297621906|ref|YP_003710043.1|	-	0.0019	18.3	0.1	0.0089	16.2	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
rve_3	PF13683.1	gi|297621907|ref|YP_003710044.1|	-	1.2e-28	98.4	0.0	2.9e-28	97.1	0.0	1.7	1	0	0	1	1	1	1	Integrase	core	domain
rve	PF00665.21	gi|297621907|ref|YP_003710044.1|	-	4.2e-23	81.7	0.0	9.5e-23	80.5	0.0	1.6	2	0	0	2	2	2	1	Integrase	core	domain
HTH_21	PF13276.1	gi|297621907|ref|YP_003710044.1|	-	7.3e-14	51.5	8.7	1.8e-13	50.2	6.0	1.6	1	0	0	1	1	1	1	HTH-like	domain
DDE_Tnp_IS240	PF13610.1	gi|297621907|ref|YP_003710044.1|	-	0.00026	20.9	0.0	0.00054	19.9	0.0	1.6	1	0	0	1	1	1	1	DDE	domain
rve_2	PF13333.1	gi|297621907|ref|YP_003710044.1|	-	0.034	14.2	0.0	0.3	11.1	0.0	2.4	2	0	0	2	2	2	0	Integrase	core	domain
HTH_23	PF13384.1	gi|297621907|ref|YP_003710044.1|	-	0.058	13.0	2.0	0.75	9.5	0.3	3.0	3	0	0	3	3	3	0	Homeodomain-like	domain
HTH_32	PF13565.1	gi|297621907|ref|YP_003710044.1|	-	0.13	13.0	4.4	0.15	12.8	0.5	2.7	2	1	1	3	3	3	0	Homeodomain-like	domain
EIIC-GAT	PF03611.9	gi|297621908|ref|YP_003710045.1|	-	0.056	12.2	1.0	0.08	11.7	0.7	1.3	1	1	0	1	1	1	0	PTS	system	sugar-specific	permease	component
FUR	PF01475.14	gi|297621910|ref|YP_003710047.1|	-	1e-19	70.6	0.2	1.1e-19	70.4	0.1	1.1	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
HTH_20	PF12840.2	gi|297621910|ref|YP_003710047.1|	-	0.017	14.9	0.0	0.03	14.1	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|297621910|ref|YP_003710047.1|	-	0.064	12.6	0.1	4.6	6.7	0.0	2.2	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
Hormone_4	PF00220.12	gi|297621910|ref|YP_003710047.1|	-	0.091	12.4	1.3	0.091	12.4	0.9	2.2	3	0	0	3	3	3	0	Neurohypophysial	hormones,	N-terminal	Domain
HTH_5	PF01022.15	gi|297621910|ref|YP_003710047.1|	-	0.092	12.4	0.2	0.2	11.3	0.1	1.7	1	1	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
PHD_2	PF13831.1	gi|297621910|ref|YP_003710047.1|	-	3.9	6.8	6.5	0.2	10.9	0.6	1.8	2	0	0	2	2	2	0	PHD-finger
TLC	PF03219.9	gi|297621911|ref|YP_003710048.1|	-	1.2e-175	584.7	24.4	1.3e-175	584.5	16.9	1.0	1	0	0	1	1	1	1	TLC	ATP/ADP	transporter
Ldr_toxin	PF13940.1	gi|297621911|ref|YP_003710048.1|	-	8	6.3	8.7	2.6	7.8	0.4	2.7	2	0	0	2	2	2	0	Toxin	Ldr,	type	I	toxin-antitoxin	system
TLC	PF03219.9	gi|297621912|ref|YP_003710049.1|	-	7.2e-193	641.5	28.0	8.5e-193	641.2	19.4	1.0	1	0	0	1	1	1	1	TLC	ATP/ADP	transporter
PGK	PF00162.14	gi|297621913|ref|YP_003710050.1|	-	1.2e-147	491.5	0.0	1.4e-147	491.3	0.0	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
SNO	PF01174.14	gi|297621914|ref|YP_003710051.1|	-	6.7e-47	159.5	0.0	9e-47	159.1	0.0	1.1	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.9	gi|297621914|ref|YP_003710051.1|	-	1e-06	28.4	0.0	1.9e-06	27.5	0.0	1.4	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.23	gi|297621914|ref|YP_003710051.1|	-	1.7e-05	24.3	0.3	8.8e-05	22.0	0.2	1.9	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
DJ-1_PfpI	PF01965.19	gi|297621914|ref|YP_003710051.1|	-	0.012	15.0	0.0	0.016	14.6	0.0	1.2	1	0	0	1	1	1	0	DJ-1/PfpI	family
Peptidase_S51	PF03575.12	gi|297621914|ref|YP_003710051.1|	-	0.026	14.2	0.0	0.036	13.8	0.0	1.2	1	0	0	1	1	1	0	Peptidase	family	S51
DUF4066	PF13278.1	gi|297621914|ref|YP_003710051.1|	-	0.13	11.4	0.0	0.22	10.8	0.0	1.4	1	0	0	1	1	1	0	Putative	amidotransferase
SOR_SNZ	PF01680.12	gi|297621915|ref|YP_003710052.1|	-	7.2e-107	355.6	4.7	9.4e-107	355.3	3.2	1.1	1	0	0	1	1	1	1	SOR/SNZ	family
ThiG	PF05690.9	gi|297621915|ref|YP_003710052.1|	-	8.7e-08	31.5	6.2	1.3e-05	24.3	0.4	2.7	1	1	2	3	3	3	2	Thiazole	biosynthesis	protein	ThiG
NMO	PF03060.10	gi|297621915|ref|YP_003710052.1|	-	5.8e-05	22.4	3.4	0.0036	16.5	0.1	2.4	2	1	0	2	2	2	2	Nitronate	monooxygenase
IGPS	PF00218.16	gi|297621915|ref|YP_003710052.1|	-	0.00051	19.1	0.4	0.031	13.3	0.0	2.8	2	2	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
His_biosynth	PF00977.16	gi|297621915|ref|YP_003710052.1|	-	0.0017	17.6	0.2	0.044	13.0	0.0	2.2	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
NanE	PF04131.9	gi|297621915|ref|YP_003710052.1|	-	0.0038	16.2	1.2	0.026	13.4	0.0	2.5	2	1	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
Dus	PF01207.12	gi|297621915|ref|YP_003710052.1|	-	0.014	14.2	0.5	3.3	6.4	0.1	2.4	2	1	0	2	2	2	0	Dihydrouridine	synthase	(Dus)
PcrB	PF01884.12	gi|297621915|ref|YP_003710052.1|	-	0.032	13.4	1.7	0.04	13.1	0.1	1.9	2	0	0	2	2	2	0	PcrB	family
TMP-TENI	PF02581.12	gi|297621915|ref|YP_003710052.1|	-	0.072	12.2	0.6	3.9	6.5	0.1	2.4	2	0	0	2	2	2	0	Thiamine	monophosphate	synthase/TENI
OMPdecase	PF00215.19	gi|297621915|ref|YP_003710052.1|	-	0.1	11.9	0.7	0.38	10.0	0.2	2.1	2	1	0	2	2	2	0	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
RNase_T	PF00929.19	gi|297621916|ref|YP_003710053.1|	-	1.6e-32	113.0	0.2	2.2e-32	112.6	0.2	1.2	1	0	0	1	1	1	1	Exonuclease
DUF3820	PF12843.2	gi|297621916|ref|YP_003710053.1|	-	3.2e-07	29.8	0.1	9.3e-07	28.3	0.0	1.8	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3820)
RNase_H_2	PF13482.1	gi|297621916|ref|YP_003710053.1|	-	0.00018	21.3	0.0	0.00074	19.3	0.0	1.9	1	1	0	1	1	1	1	RNase_H	superfamily
DNA_pol_A_exo1	PF01612.15	gi|297621916|ref|YP_003710053.1|	-	0.00095	18.6	0.1	0.011	15.1	0.0	2.5	1	1	1	2	2	2	1	3'-5'	exonuclease
MMR_HSR1	PF01926.18	gi|297621917|ref|YP_003710054.1|	-	3.3e-20	72.1	0.0	8e-20	70.9	0.0	1.6	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|297621917|ref|YP_003710054.1|	-	4.5e-08	32.5	0.0	6.3e-08	32.0	0.0	1.3	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.18	gi|297621917|ref|YP_003710054.1|	-	9.7e-07	28.7	0.0	0.0045	16.8	0.1	2.2	1	1	1	2	2	2	2	Dynamin	family
Miro	PF08477.8	gi|297621917|ref|YP_003710054.1|	-	1.8e-06	28.4	0.0	1.4e-05	25.5	0.0	2.1	1	1	0	1	1	1	1	Miro-like	protein
Septin	PF00735.13	gi|297621917|ref|YP_003710054.1|	-	3e-05	23.1	0.3	0.11	11.4	0.0	2.4	1	1	1	2	2	2	2	Septin
GTP_EFTU	PF00009.22	gi|297621917|ref|YP_003710054.1|	-	4.9e-05	22.8	0.0	0.07	12.5	0.0	2.2	2	0	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
DUF258	PF03193.11	gi|297621917|ref|YP_003710054.1|	-	0.0004	19.6	0.0	0.00063	18.9	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AIG1	PF04548.11	gi|297621917|ref|YP_003710054.1|	-	0.0038	16.3	0.0	0.0091	15.1	0.0	1.6	1	1	0	1	1	1	1	AIG1	family
PduV-EutP	PF10662.4	gi|297621917|ref|YP_003710054.1|	-	0.0081	15.6	0.0	0.62	9.5	0.0	2.2	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
SRPRB	PF09439.5	gi|297621917|ref|YP_003710054.1|	-	0.0089	15.2	0.1	0.028	13.6	0.0	2.0	1	1	1	2	2	2	1	Signal	recognition	particle	receptor	beta	subunit
Arch_ATPase	PF01637.13	gi|297621917|ref|YP_003710054.1|	-	0.025	14.2	0.1	0.097	12.3	0.0	1.8	2	0	0	2	2	2	0	Archaeal	ATPase
Ras	PF00071.17	gi|297621917|ref|YP_003710054.1|	-	0.027	13.8	0.1	0.82	9.0	0.0	2.4	2	1	0	2	2	2	0	Ras	family
ATP_bind_1	PF03029.12	gi|297621917|ref|YP_003710054.1|	-	0.036	13.5	0.1	0.15	11.5	0.0	1.9	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_14	PF13173.1	gi|297621917|ref|YP_003710054.1|	-	0.048	13.5	0.0	0.093	12.6	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|297621917|ref|YP_003710054.1|	-	0.11	12.6	0.0	0.34	11.0	0.0	1.9	1	1	1	2	2	2	0	AAA	domain
UPF0079	PF02367.12	gi|297621918|ref|YP_003710055.1|	-	1.7e-36	124.5	0.0	2e-36	124.3	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
RNA_helicase	PF00910.17	gi|297621918|ref|YP_003710055.1|	-	0.0077	16.4	0.0	0.015	15.4	0.0	1.5	2	0	0	2	2	1	1	RNA	helicase
AAA_23	PF13476.1	gi|297621918|ref|YP_003710055.1|	-	0.018	15.3	0.0	0.018	15.3	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|297621918|ref|YP_003710055.1|	-	0.019	14.8	0.0	0.025	14.4	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|297621918|ref|YP_003710055.1|	-	0.026	13.9	0.0	0.034	13.5	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|297621918|ref|YP_003710055.1|	-	0.04	13.5	0.0	0.05	13.2	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
DUF258	PF03193.11	gi|297621918|ref|YP_003710055.1|	-	0.061	12.5	0.0	0.062	12.4	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA	PF00004.24	gi|297621918|ref|YP_003710055.1|	-	0.087	13.0	0.0	0.11	12.7	0.0	1.2	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|297621918|ref|YP_003710055.1|	-	0.092	12.8	0.0	0.14	12.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|297621918|ref|YP_003710055.1|	-	0.093	13.2	0.0	0.18	12.2	0.0	1.5	1	1	0	1	1	1	0	Miro-like	protein
Viral_helicase1	PF01443.13	gi|297621918|ref|YP_003710055.1|	-	0.098	12.1	0.0	0.15	11.5	0.0	1.2	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_17	PF13207.1	gi|297621918|ref|YP_003710055.1|	-	0.1	13.4	0.0	0.13	13.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|297621918|ref|YP_003710055.1|	-	0.12	12.6	0.0	0.15	12.3	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|297621918|ref|YP_003710055.1|	-	0.14	12.4	0.0	0.21	11.8	0.0	1.2	1	0	0	1	1	1	0	ABC	transporter
cobW	PF02492.14	gi|297621918|ref|YP_003710055.1|	-	0.16	11.4	0.1	0.27	10.6	0.0	1.4	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_24	PF13479.1	gi|297621918|ref|YP_003710055.1|	-	0.17	11.4	0.0	0.22	11.0	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
DUF2709	PF10915.3	gi|297621919|ref|YP_003710056.1|	-	1.5e-117	390.7	4.3	1.7e-117	390.5	3.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2709)
ELFV_dehydrog_N	PF02812.13	gi|297621920|ref|YP_003710057.1|	-	5.5e-31	106.8	0.0	1.2e-30	105.7	0.0	1.5	2	0	0	2	2	2	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
ELFV_dehydrog	PF00208.16	gi|297621920|ref|YP_003710057.1|	-	1.4e-28	100.1	0.0	7.2e-26	91.2	0.0	2.2	1	1	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
UDPG_MGDP_dh_N	PF03721.9	gi|297621920|ref|YP_003710057.1|	-	0.01	15.2	0.0	0.038	13.3	0.0	1.9	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
3HCDH_N	PF02737.13	gi|297621920|ref|YP_003710057.1|	-	0.027	14.1	0.0	0.058	13.0	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|297621920|ref|YP_003710057.1|	-	0.038	14.4	0.0	0.86	10.0	0.0	2.3	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|297621920|ref|YP_003710057.1|	-	0.074	12.1	0.0	0.13	11.3	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Peptidase_M4	PF01447.13	gi|297621920|ref|YP_003710057.1|	-	0.11	12.6	0.0	0.21	11.7	0.0	1.3	1	0	0	1	1	1	0	Thermolysin	metallopeptidase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|297621920|ref|YP_003710057.1|	-	0.14	11.9	0.0	0.76	9.5	0.0	2.0	2	0	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
tRNA-synt_1d	PF00750.14	gi|297621921|ref|YP_003710058.1|	-	1.7e-99	332.9	0.0	2.3e-99	332.5	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.10	gi|297621921|ref|YP_003710058.1|	-	7.8e-31	106.4	0.4	1.6e-30	105.5	0.2	1.6	1	0	0	1	1	1	1	DALR	anticodon	binding	domain
Arg_tRNA_synt_N	PF03485.11	gi|297621921|ref|YP_003710058.1|	-	4e-25	88.1	0.2	1.3e-24	86.5	0.1	2.0	1	0	0	1	1	1	1	Arginyl	tRNA	synthetase	N	terminal	domain
tRNA-synt_1g	PF09334.6	gi|297621921|ref|YP_003710058.1|	-	0.022	13.4	0.0	0.035	12.7	0.0	1.3	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|297621921|ref|YP_003710058.1|	-	0.05	11.6	0.0	0.087	10.8	0.0	1.3	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1e	PF01406.14	gi|297621921|ref|YP_003710058.1|	-	0.12	11.4	0.0	0.29	10.2	0.0	1.6	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(C)	catalytic	domain
E1-E2_ATPase	PF00122.15	gi|297621922|ref|YP_003710059.1|	-	1.1e-66	224.2	0.9	1.9e-66	223.3	0.6	1.4	1	0	0	1	1	1	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|297621922|ref|YP_003710059.1|	-	3.1e-46	158.5	1.3	6.4e-46	157.4	0.9	1.6	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|297621922|ref|YP_003710059.1|	-	6.3e-17	62.3	0.0	1.1e-16	61.5	0.0	1.4	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.21	gi|297621922|ref|YP_003710059.1|	-	1.8e-15	56.8	1.8	3.5e-15	55.8	0.2	2.4	2	0	0	2	2	2	1	Heavy-metal-associated	domain
Hydrolase_3	PF08282.7	gi|297621922|ref|YP_003710059.1|	-	0.00025	20.6	1.1	0.005	16.4	0.5	2.5	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
ParBc	PF02195.13	gi|297621923|ref|YP_003710060.1|	-	4.8e-24	84.2	0.2	9.9e-24	83.2	0.2	1.5	1	0	0	1	1	1	1	ParB-like	nuclease	domain
HTH_3	PF01381.17	gi|297621923|ref|YP_003710060.1|	-	7.5e-07	28.8	0.8	7.4e-05	22.5	0.0	3.6	4	0	0	4	4	4	1	Helix-turn-helix
KorB	PF08535.5	gi|297621923|ref|YP_003710060.1|	-	4.5e-06	26.7	0.0	1.5e-05	25.0	0.0	1.9	1	0	0	1	1	1	1	KorB	domain
HTH_38	PF13936.1	gi|297621923|ref|YP_003710060.1|	-	9.1e-05	21.9	0.0	0.3	10.6	0.0	2.9	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|297621923|ref|YP_003710060.1|	-	0.00011	22.2	0.3	0.0021	18.0	0.0	3.2	3	2	0	3	3	3	1	Helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|297621923|ref|YP_003710060.1|	-	0.0078	15.9	0.0	0.022	14.5	0.0	1.7	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_37	PF13744.1	gi|297621923|ref|YP_003710060.1|	-	0.026	14.3	0.6	0.94	9.3	0.0	2.8	2	1	0	2	2	2	0	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|297621923|ref|YP_003710060.1|	-	0.03	13.7	0.5	0.14	11.6	0.0	2.5	3	0	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
Sigma70_r4_2	PF08281.7	gi|297621923|ref|YP_003710060.1|	-	0.032	13.7	0.0	0.57	9.6	0.0	2.7	2	1	0	2	2	2	0	Sigma-70,	region	4
HTH_23	PF13384.1	gi|297621923|ref|YP_003710060.1|	-	0.045	13.4	0.0	0.38	10.4	0.0	2.4	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_31	PF13560.1	gi|297621923|ref|YP_003710060.1|	-	0.049	13.8	0.1	0.21	11.8	0.0	2.3	1	1	0	1	1	1	0	Helix-turn-helix	domain
DUF2540	PF10802.3	gi|297621923|ref|YP_003710060.1|	-	0.13	11.9	0.6	6.7	6.4	0.1	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2540)
TPR_12	PF13424.1	gi|297621924|ref|YP_003710061.1|	-	0.00088	19.1	0.5	0.019	14.9	0.0	2.4	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TM_helix	PF05552.7	gi|297621924|ref|YP_003710061.1|	-	0.16	11.6	1.0	0.38	10.4	0.2	1.9	2	0	0	2	2	2	0	Conserved	TM	helix
Topoisom_bac	PF01131.15	gi|297621926|ref|YP_003710063.1|	-	3.4e-128	427.9	1.3	4.7e-128	427.4	0.9	1.2	1	0	0	1	1	1	1	DNA	topoisomerase
zf-C4_Topoisom	PF01396.14	gi|297621926|ref|YP_003710063.1|	-	1.5e-32	110.8	17.5	3.2e-12	45.7	1.9	3.6	3	0	0	3	3	3	3	Topoisomerase	DNA	binding	C4	zinc	finger
SWIB	PF02201.13	gi|297621926|ref|YP_003710063.1|	-	1.4e-22	79.1	0.0	3.8e-22	77.7	0.0	1.8	1	0	0	1	1	1	1	SWIB/MDM2	domain
Toprim	PF01751.17	gi|297621926|ref|YP_003710063.1|	-	2.2e-21	75.6	0.0	5.3e-21	74.4	0.0	1.7	1	0	0	1	1	1	1	Toprim	domain
Zn-ribbon_8	PF09723.5	gi|297621926|ref|YP_003710063.1|	-	0.017	15.0	0.3	0.79	9.7	0.0	2.7	2	0	0	2	2	2	0	Zinc	ribbon	domain
Zn_Tnp_IS1	PF03811.8	gi|297621926|ref|YP_003710063.1|	-	0.074	12.5	1.4	1.6	8.2	0.1	2.7	2	0	0	2	2	2	0	InsA	N-terminal	domain
Toprim_4	PF13662.1	gi|297621926|ref|YP_003710063.1|	-	0.13	12.2	0.0	0.44	10.5	0.0	2.0	1	1	0	1	1	1	0	Toprim	domain
DNA_ligase_ZBD	PF03119.11	gi|297621926|ref|YP_003710063.1|	-	0.19	11.4	2.1	0.58	9.9	0.2	2.5	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-TFIIB	PF13453.1	gi|297621926|ref|YP_003710063.1|	-	0.71	9.1	3.1	15	4.8	0.7	2.6	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
Zn_ribbon_recom	PF13408.1	gi|297621926|ref|YP_003710063.1|	-	3.6	7.9	5.0	2.8	8.2	0.2	2.7	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|297621926|ref|YP_003710063.1|	-	9.6	6.1	8.4	1.7	8.5	1.0	2.5	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
CaMKII_AD	PF08332.5	gi|297621927|ref|YP_003710064.1|	-	5.3e-07	29.5	0.1	6.7e-07	29.2	0.1	1.1	1	0	0	1	1	1	1	Calcium/calmodulin	dependent	protein	kinase	II	Association
SnoaL_2	PF12680.2	gi|297621927|ref|YP_003710064.1|	-	8.9e-07	29.2	0.0	1.1e-06	28.9	0.0	1.2	1	0	0	1	1	1	1	SnoaL-like	domain
SnoaL_3	PF13474.1	gi|297621927|ref|YP_003710064.1|	-	2e-06	27.8	0.0	3e-06	27.2	0.0	1.3	1	0	0	1	1	1	1	SnoaL-like	domain
DUF4440	PF14534.1	gi|297621927|ref|YP_003710064.1|	-	1.3e-05	25.3	0.0	1.6e-05	25.0	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4440)
SnoaL	PF07366.7	gi|297621927|ref|YP_003710064.1|	-	0.002	17.6	0.0	0.0032	17.0	0.0	1.3	1	0	0	1	1	1	1	SnoaL-like	polyketide	cyclase
BLYB	PF05289.6	gi|297621927|ref|YP_003710064.1|	-	0.0071	16.1	0.2	0.078	12.7	0.0	2.4	3	0	0	3	3	3	1	Borrelia	hemolysin	accessory	protein
SnoaL_4	PF13577.1	gi|297621927|ref|YP_003710064.1|	-	0.013	15.4	0.0	0.032	14.1	0.0	1.6	1	1	0	1	1	1	0	SnoaL-like	domain
NTF2	PF02136.15	gi|297621927|ref|YP_003710064.1|	-	0.025	14.9	0.0	0.035	14.4	0.0	1.2	1	0	0	1	1	1	0	Nuclear	transport	factor	2	(NTF2)	domain
OEP	PF02321.13	gi|297621928|ref|YP_003710065.1|	-	8e-37	126.6	0.1	2.2e-18	66.5	0.0	2.1	2	0	0	2	2	2	2	Outer	membrane	efflux	protein
MAD	PF05557.8	gi|297621928|ref|YP_003710065.1|	-	0.0077	14.3	1.7	0.017	13.2	1.2	1.5	1	0	0	1	1	1	1	Mitotic	checkpoint	protein
DUF947	PF06102.7	gi|297621928|ref|YP_003710065.1|	-	0.057	13.2	0.4	0.13	12.0	0.3	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF947)
ABC2_membrane_3	PF12698.2	gi|297621929|ref|YP_003710066.1|	-	1.5e-42	145.8	13.3	1.8e-42	145.6	9.2	1.0	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.19	gi|297621929|ref|YP_003710066.1|	-	3.9e-26	91.5	16.0	1.1e-24	86.7	9.2	2.2	2	0	0	2	2	2	2	ABC-2	type	transporter
ABC2_membrane_2	PF12679.2	gi|297621929|ref|YP_003710066.1|	-	1.1e-23	83.4	10.0	1.4e-23	83.1	6.9	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|297621929|ref|YP_003710066.1|	-	1.8e-09	37.1	11.7	2.4e-09	36.7	8.1	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|297621930|ref|YP_003710067.1|	-	7.1e-47	160.0	21.5	8.7e-47	159.8	14.9	1.0	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|297621930|ref|YP_003710067.1|	-	5.1e-33	114.1	3.1	9.6e-33	113.2	2.1	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.19	gi|297621930|ref|YP_003710067.1|	-	5.7e-25	87.7	30.1	1.6e-21	76.4	14.3	2.7	2	1	0	2	2	2	2	ABC-2	type	transporter
ABC2_membrane_4	PF12730.2	gi|297621930|ref|YP_003710067.1|	-	4.4e-15	55.4	19.4	6.4e-15	54.9	13.5	1.3	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
CcmB	PF03379.8	gi|297621930|ref|YP_003710067.1|	-	5.8e-06	25.6	11.3	0.00041	19.6	4.7	2.3	2	0	0	2	2	2	2	CcmB	protein
PIG-P	PF08510.7	gi|297621930|ref|YP_003710067.1|	-	0.7	9.5	6.2	2	8.0	3.3	2.5	2	0	0	2	2	2	0	PIG-P
ABC2_membrane_5	PF13346.1	gi|297621930|ref|YP_003710067.1|	-	0.75	9.0	31.0	0.87	8.8	18.1	2.7	2	1	0	2	2	2	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|297621931|ref|YP_003710068.1|	-	1.6e-54	183.9	0.0	4e-26	91.9	0.0	2.3	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|297621931|ref|YP_003710068.1|	-	1.6e-29	103.7	3.6	1.3e-14	54.8	0.1	4.3	2	2	1	3	3	3	3	AAA	domain
AAA_23	PF13476.1	gi|297621931|ref|YP_003710068.1|	-	1.4e-09	38.6	1.4	5.4e-05	23.6	0.1	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|297621931|ref|YP_003710068.1|	-	5.1e-07	29.0	0.0	0.5	9.3	0.0	4.0	3	1	1	4	4	4	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|297621931|ref|YP_003710068.1|	-	3.3e-06	26.5	0.4	0.032	13.7	0.1	2.9	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
SbcCD_C	PF13558.1	gi|297621931|ref|YP_003710068.1|	-	2.3e-05	24.2	0.0	0.26	11.2	0.0	3.2	2	1	0	2	2	2	2	Putative	exonuclease	SbcCD,	C	subunit
DUF258	PF03193.11	gi|297621931|ref|YP_003710068.1|	-	6.6e-05	22.1	0.1	0.095	11.8	0.0	2.6	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
AAA_14	PF13173.1	gi|297621931|ref|YP_003710068.1|	-	7.1e-05	22.7	0.2	0.057	13.3	0.0	3.8	3	1	0	3	3	3	1	AAA	domain
AAA_17	PF13207.1	gi|297621931|ref|YP_003710068.1|	-	7.3e-05	23.5	0.0	0.055	14.3	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|297621931|ref|YP_003710068.1|	-	0.00013	21.3	1.4	2.4	7.3	0.0	3.3	3	0	0	3	3	3	1	RecF/RecN/SMC	N	terminal	domain
AAA	PF00004.24	gi|297621931|ref|YP_003710068.1|	-	0.00016	21.8	0.2	0.56	10.4	0.0	3.6	3	1	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|297621931|ref|YP_003710068.1|	-	0.00024	20.5	0.0	0.028	13.8	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
MobB	PF03205.9	gi|297621931|ref|YP_003710068.1|	-	0.00048	19.8	0.1	0.15	11.7	0.0	2.4	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|297621931|ref|YP_003710068.1|	-	0.0009	18.8	0.0	0.21	11.1	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|297621931|ref|YP_003710068.1|	-	0.0012	18.7	0.1	2.3	8.0	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|297621931|ref|YP_003710068.1|	-	0.0015	18.2	0.4	5.1	6.8	0.0	3.5	3	0	0	3	3	3	0	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.1	gi|297621931|ref|YP_003710068.1|	-	0.0019	18.3	0.3	1.7	8.7	0.0	3.3	4	0	0	4	4	3	1	AAA	domain
Zeta_toxin	PF06414.7	gi|297621931|ref|YP_003710068.1|	-	0.0024	16.9	0.1	0.12	11.4	0.0	2.2	2	0	0	2	2	2	1	Zeta	toxin
AAA_10	PF12846.2	gi|297621931|ref|YP_003710068.1|	-	0.0025	17.3	0.1	1.6	8.0	0.0	2.4	2	0	0	2	2	2	1	AAA-like	domain
Rad17	PF03215.10	gi|297621931|ref|YP_003710068.1|	-	0.0027	16.4	0.0	0.4	9.2	0.0	2.1	2	0	0	2	2	2	1	Rad17	cell	cycle	checkpoint	protein
AAA_19	PF13245.1	gi|297621931|ref|YP_003710068.1|	-	0.0031	17.2	0.1	0.15	11.8	0.0	2.5	2	0	0	2	2	2	1	Part	of	AAA	domain
Mg_chelatase	PF01078.16	gi|297621931|ref|YP_003710068.1|	-	0.0041	16.3	0.3	0.33	10.0	0.0	2.4	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
UPF0079	PF02367.12	gi|297621931|ref|YP_003710068.1|	-	0.0043	16.6	0.5	1.2	8.7	0.0	2.4	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_16	PF13191.1	gi|297621931|ref|YP_003710068.1|	-	0.0045	17.0	0.0	0.71	9.8	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
RNA_helicase	PF00910.17	gi|297621931|ref|YP_003710068.1|	-	0.0059	16.7	0.0	3.6	7.7	0.0	2.6	2	0	0	2	2	2	0	RNA	helicase
AAA_18	PF13238.1	gi|297621931|ref|YP_003710068.1|	-	0.006	16.8	0.0	0.12	12.7	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
KdpD	PF02702.12	gi|297621931|ref|YP_003710068.1|	-	0.0079	15.3	0.0	1.4	8.0	0.0	2.3	2	0	0	2	2	2	1	Osmosensitive	K+	channel	His	kinase	sensor	domain
SRP54	PF00448.17	gi|297621931|ref|YP_003710068.1|	-	0.0082	15.6	0.2	0.99	8.8	0.0	2.3	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
RecA	PF00154.16	gi|297621931|ref|YP_003710068.1|	-	0.01	14.9	0.0	0.029	13.4	0.0	1.6	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
MMR_HSR1	PF01926.18	gi|297621931|ref|YP_003710068.1|	-	0.017	15.0	0.1	9.4	6.2	0.0	3.0	2	2	0	2	2	2	0	50S	ribosome-binding	GTPase
Thymidylate_kin	PF02223.12	gi|297621931|ref|YP_003710068.1|	-	0.026	13.8	0.2	1.9	7.8	0.0	2.5	2	0	0	2	2	2	0	Thymidylate	kinase
AAA_28	PF13521.1	gi|297621931|ref|YP_003710068.1|	-	0.028	14.3	0.2	0.64	9.9	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
Cdc6_C	PF09079.6	gi|297621931|ref|YP_003710068.1|	-	0.032	13.9	0.0	7.3	6.3	0.0	2.4	2	0	0	2	2	2	0	CDC6,	C	terminal
AAA_13	PF13166.1	gi|297621931|ref|YP_003710068.1|	-	0.043	12.2	0.0	3.3	6.0	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.12	gi|297621931|ref|YP_003710068.1|	-	0.044	13.2	1.4	1.8	7.9	0.0	3.1	3	0	0	3	3	3	0	IstB-like	ATP	binding	protein
cobW	PF02492.14	gi|297621931|ref|YP_003710068.1|	-	0.061	12.7	0.3	0.61	9.4	0.0	2.2	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
ArgK	PF03308.11	gi|297621931|ref|YP_003710068.1|	-	0.061	12.0	0.4	6.6	5.4	0.0	2.2	2	0	0	2	2	2	0	ArgK	protein
NACHT	PF05729.7	gi|297621931|ref|YP_003710068.1|	-	0.066	12.8	1.4	0.9	9.1	0.1	2.5	2	0	0	2	2	2	0	NACHT	domain
AAA_24	PF13479.1	gi|297621931|ref|YP_003710068.1|	-	0.11	12.0	1.2	3.1	7.3	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
T2SE	PF00437.15	gi|297621931|ref|YP_003710068.1|	-	0.12	11.2	0.0	13	4.6	0.0	2.3	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
Miro	PF08477.8	gi|297621931|ref|YP_003710068.1|	-	0.16	12.4	0.0	3.2	8.2	0.0	2.5	2	0	0	2	2	2	0	Miro-like	protein
MutS_V	PF00488.16	gi|297621931|ref|YP_003710068.1|	-	0.2	11.0	0.1	9	5.6	0.0	2.2	2	0	0	2	2	2	0	MutS	domain	V
HlyD_3	PF13437.1	gi|297621932|ref|YP_003710069.1|	-	1.9e-14	53.8	0.0	2.5e-11	43.8	0.0	2.4	2	0	0	2	2	2	2	HlyD	family	secretion	protein
HlyD	PF00529.15	gi|297621932|ref|YP_003710069.1|	-	3.9e-11	42.8	0.4	2.9e-10	39.9	0.4	2.0	1	1	1	2	2	2	1	HlyD	family	secretion	protein
HlyD_2	PF12700.2	gi|297621932|ref|YP_003710069.1|	-	2.1e-10	40.2	0.0	2.5e-10	40.0	0.0	1.1	1	0	0	1	1	1	1	HlyD	family	secretion	protein
Biotin_lipoyl_2	PF13533.1	gi|297621932|ref|YP_003710069.1|	-	9.9e-06	25.1	0.0	2e-05	24.1	0.0	1.5	1	0	0	1	1	1	1	Biotin-lipoyl	like
Biotin_lipoyl	PF00364.17	gi|297621932|ref|YP_003710069.1|	-	0.017	14.7	0.0	0.11	12.1	0.0	2.1	2	0	0	2	2	2	0	Biotin-requiring	enzyme
O-ag_pol_Wzy	PF14296.1	gi|297621933|ref|YP_003710070.1|	-	0.58	8.6	6.4	0.046	12.3	0.2	2.1	2	1	1	3	3	3	0	O-antigen	polysaccharide	polymerase	Wzy
DUF1504	PF07399.6	gi|297621934|ref|YP_003710071.1|	-	3.5e-129	431.2	18.3	4.3e-129	430.9	12.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1504)
DUF1761	PF08570.5	gi|297621934|ref|YP_003710071.1|	-	0.0097	15.9	0.2	0.0097	15.9	0.1	3.6	2	1	0	3	3	3	1	Protein	of	unknown	function	(DUF1761)
Na_Ca_ex	PF01699.19	gi|297621935|ref|YP_003710072.1|	-	1.2e-50	170.8	33.6	1.3e-26	92.8	8.4	2.2	2	0	0	2	2	2	2	Sodium/calcium	exchanger	protein
DUF2909	PF11137.3	gi|297621935|ref|YP_003710072.1|	-	0.21	11.3	9.8	0.2	11.3	2.3	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2909)
CitMHS	PF03600.11	gi|297621936|ref|YP_003710073.1|	-	8.2e-24	83.8	37.8	2.2e-15	56.0	3.4	2.2	2	0	0	2	2	2	2	Citrate	transporter
TrkA_C	PF02080.16	gi|297621936|ref|YP_003710073.1|	-	3.9e-21	74.4	0.2	1.7e-10	40.2	0.0	2.4	2	0	0	2	2	2	2	TrkA-C	domain
Na_sulph_symp	PF00939.14	gi|297621936|ref|YP_003710073.1|	-	4.5e-14	52.1	35.7	6.1e-09	35.2	14.4	2.4	2	1	0	2	2	2	2	Sodium:sulfate	symporter	transmembrane	region
Na_Ca_ex	PF01699.19	gi|297621937|ref|YP_003710074.1|	-	4.1e-12	45.8	1.6	5e-12	45.6	1.1	1.1	1	0	0	1	1	1	1	Sodium/calcium	exchanger	protein
DUF21	PF01595.15	gi|297621937|ref|YP_003710074.1|	-	0.038	13.2	0.2	0.038	13.2	0.2	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF21
SdpI	PF13630.1	gi|297621937|ref|YP_003710074.1|	-	0.26	11.0	5.7	0.033	13.8	1.4	1.4	2	0	0	2	2	2	0	SdpI/YhfL	protein	family
DUF3671	PF12420.3	gi|297621938|ref|YP_003710075.1|	-	1.1	9.3	4.4	3.4	7.7	0.3	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function
SIS	PF01380.17	gi|297621939|ref|YP_003710076.1|	-	6.1e-23	80.8	0.0	1.6e-22	79.4	0.0	1.7	2	0	0	2	2	2	1	SIS	domain
CBS	PF00571.23	gi|297621939|ref|YP_003710076.1|	-	9.6e-17	60.5	0.6	4.2e-08	32.8	0.0	2.6	2	0	0	2	2	2	2	CBS	domain
SIS_2	PF13580.1	gi|297621939|ref|YP_003710076.1|	-	2.4e-07	30.5	0.1	0.00013	21.6	0.0	3.0	2	1	1	3	3	3	2	SIS	domain
Ins_allergen_rp	PF06757.8	gi|297621939|ref|YP_003710076.1|	-	0.07	12.6	0.0	0.22	11.0	0.0	1.8	2	0	0	2	2	2	0	Insect	allergen	related	repeat,	nitrile-specifier	detoxification
GAF_3	PF13492.1	gi|297621939|ref|YP_003710076.1|	-	0.076	13.1	0.0	0.21	11.6	0.0	1.7	1	0	0	1	1	1	0	GAF	domain
Iso_dh	PF00180.15	gi|297621940|ref|YP_003710077.1|	-	1.7e-94	316.6	0.0	2.2e-94	316.2	0.0	1.1	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
Ribosomal_L29	PF00831.18	gi|297621940|ref|YP_003710077.1|	-	2.2	8.0	7.0	7.3	6.3	0.2	3.2	3	0	0	3	3	3	0	Ribosomal	L29	protein
SDF	PF00375.13	gi|297621941|ref|YP_003710078.1|	-	3.7e-133	444.0	42.7	4.1e-133	443.9	29.6	1.0	1	0	0	1	1	1	1	Sodium:dicarboxylate	symporter	family
LpxK	PF02606.9	gi|297621942|ref|YP_003710079.1|	-	3.9e-87	292.2	0.0	4.6e-87	292.0	0.0	1.0	1	0	0	1	1	1	1	Tetraacyldisaccharide-1-P	4'-kinase
Oxidored_nitro	PF00148.14	gi|297621942|ref|YP_003710079.1|	-	0.12	10.9	0.1	0.33	9.5	0.0	1.7	2	0	0	2	2	2	0	Nitrogenase	component	1	type	Oxidoreductase
SIS_2	PF13580.1	gi|297621943|ref|YP_003710080.1|	-	2.2e-23	82.4	0.0	3.5e-23	81.8	0.0	1.3	1	0	0	1	1	1	1	SIS	domain
SIS	PF01380.17	gi|297621943|ref|YP_003710080.1|	-	0.0014	18.2	0.0	0.0028	17.2	0.0	1.5	1	0	0	1	1	1	1	SIS	domain
AceK	PF06315.6	gi|297621945|ref|YP_003710082.1|	-	0.002	16.5	0.7	0.0023	16.2	0.5	1.1	1	0	0	1	1	1	1	Isocitrate	dehydrogenase	kinase/phosphatase	(AceK)
Cation_efflux	PF01545.16	gi|297621945|ref|YP_003710082.1|	-	0.0091	15.0	3.8	0.018	14.1	2.6	1.5	1	0	0	1	1	1	1	Cation	efflux	family
MTHFR	PF02219.12	gi|297621946|ref|YP_003710083.1|	-	0.00019	20.6	0.0	0.043	12.8	0.0	2.1	2	0	0	2	2	2	2	Methylenetetrahydrofolate	reductase
Meth_synt_1	PF08267.7	gi|297621947|ref|YP_003710084.1|	-	5.1e-15	55.5	0.8	5.5e-09	35.7	0.0	3.0	2	1	1	3	3	3	3	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_2	PF01717.13	gi|297621947|ref|YP_003710084.1|	-	0.00082	18.4	0.0	0.019	13.9	0.0	2.0	2	0	0	2	2	2	2	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_2	PF01717.13	gi|297621948|ref|YP_003710085.1|	-	2.2e-36	125.4	0.0	6.4e-36	123.9	0.0	1.7	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_1	PF08267.7	gi|297621948|ref|YP_003710085.1|	-	0.00027	20.2	0.0	0.00043	19.6	0.0	1.3	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	N-terminal	domain
DUF4096	PF13340.1	gi|297621951|ref|YP_003710088.1|	-	2.6e-16	59.2	0.6	2.6e-16	59.2	0.4	1.8	2	1	0	2	2	2	1	Putative	transposase	of	IS4/5	family	(DUF4096)
DDE_Tnp_1	PF01609.16	gi|297621952|ref|YP_003710089.1|	-	2.8e-15	56.4	1.1	6.2e-15	55.3	0.7	1.5	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_2	PF13586.1	gi|297621952|ref|YP_003710089.1|	-	2.8e-14	53.0	0.3	3.9e-14	52.6	0.2	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|297621952|ref|YP_003710089.1|	-	0.0023	17.6	0.0	0.0079	15.9	0.0	1.7	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_4	PF13359.1	gi|297621952|ref|YP_003710089.1|	-	0.014	14.9	0.0	0.017	14.6	0.0	1.1	1	0	0	1	1	1	0	DDE	superfamily	endonuclease
UvdE	PF03851.9	gi|297621952|ref|YP_003710089.1|	-	0.14	11.1	0.0	0.19	10.6	0.0	1.3	1	0	0	1	1	1	0	UV-endonuclease	UvdE
Ank_2	PF12796.2	gi|297621953|ref|YP_003710090.1|	-	7.6e-15	55.0	0.4	0.00096	19.4	0.0	6.0	1	1	2	3	3	3	3	Ankyrin	repeats	(3	copies)
Ank_4	PF13637.1	gi|297621953|ref|YP_003710090.1|	-	2e-09	37.7	0.2	1.5	9.4	0.0	7.0	5	1	3	8	8	8	2	Ankyrin	repeats	(many	copies)
Ank	PF00023.25	gi|297621953|ref|YP_003710090.1|	-	3.1e-08	33.0	2.4	2.6	7.9	0.0	7.1	6	2	1	7	7	7	3	Ankyrin	repeat
Ank_3	PF13606.1	gi|297621953|ref|YP_003710090.1|	-	4.8e-07	29.4	0.1	28	5.3	0.0	8.3	9	1	0	9	9	9	1	Ankyrin	repeat
Ank_5	PF13857.1	gi|297621953|ref|YP_003710090.1|	-	0.0013	18.9	0.0	46	4.4	0.0	5.5	6	0	0	6	6	6	0	Ankyrin	repeats	(many	copies)
PseudoU_synth_2	PF00849.17	gi|297621954|ref|YP_003710091.1|	-	2.1e-27	95.9	0.1	2.6e-27	95.6	0.1	1.1	1	0	0	1	1	1	1	RNA	pseudouridylate	synthase
SpoU_methylase	PF00588.14	gi|297621955|ref|YP_003710092.1|	-	1.6e-37	128.5	0.0	2.1e-37	128.1	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
SpoU_sub_bind	PF08032.7	gi|297621955|ref|YP_003710092.1|	-	0.00033	20.7	0.0	0.003	17.6	0.0	2.3	2	0	0	2	2	2	1	RNA	2'-O	ribose	methyltransferase	substrate	binding
Methyltrans_SAM	PF10672.4	gi|297621956|ref|YP_003710093.1|	-	1.2e-17	63.7	0.0	1.6e-17	63.2	0.0	1.1	1	0	0	1	1	1	1	S-adenosylmethionine-dependent	methyltransferase
Methyltransf_26	PF13659.1	gi|297621956|ref|YP_003710093.1|	-	1.4e-06	28.2	0.0	2.7e-06	27.4	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|297621956|ref|YP_003710093.1|	-	2.7e-06	26.9	0.0	3.8e-06	26.4	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_18	PF12847.2	gi|297621956|ref|YP_003710093.1|	-	1.5e-05	25.5	0.0	2.5e-05	24.8	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|297621956|ref|YP_003710093.1|	-	0.00036	20.1	0.0	0.0005	19.6	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Met_10	PF02475.11	gi|297621956|ref|YP_003710093.1|	-	0.0011	18.6	0.0	0.0014	18.2	0.0	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
MTS	PF05175.9	gi|297621956|ref|YP_003710093.1|	-	0.003	16.9	0.0	0.0054	16.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.8	gi|297621956|ref|YP_003710093.1|	-	0.049	12.7	0.0	0.066	12.3	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.1	gi|297621956|ref|YP_003710093.1|	-	0.059	12.9	0.0	0.085	12.4	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
CinA	PF02464.12	gi|297621957|ref|YP_003710094.1|	-	3e-47	159.9	0.0	5.6e-47	159.0	0.0	1.4	1	0	0	1	1	1	1	Competence-damaged	protein
MoCF_biosynth	PF00994.19	gi|297621957|ref|YP_003710094.1|	-	2.7e-29	101.4	0.0	4.3e-29	100.7	0.0	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
Peptidase_A8	PF01252.13	gi|297621959|ref|YP_003710096.1|	-	3e-32	111.3	8.4	4.1e-32	110.9	5.8	1.1	1	0	0	1	1	1	1	Signal	peptidase	(SPase)	II
zf-dskA_traR	PF01258.12	gi|297621960|ref|YP_003710097.1|	-	1.4e-09	37.4	0.0	2.1e-09	36.9	0.0	1.3	1	0	0	1	1	1	1	Prokaryotic	dksA/traR	C4-type	zinc	finger
Uds1	PF15456.1	gi|297621960|ref|YP_003710097.1|	-	0.025	14.5	0.4	0.035	14.0	0.3	1.2	1	0	0	1	1	1	0	Up-regulated	During	Septation
Diphthamide_syn	PF01866.12	gi|297621960|ref|YP_003710097.1|	-	0.03	13.5	0.3	1.5	7.9	0.0	2.1	1	1	0	2	2	2	0	Putative	diphthamide	synthesis	protein
DUF2096	PF09869.4	gi|297621960|ref|YP_003710097.1|	-	0.056	13.3	0.2	0.49	10.2	0.0	2.0	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2096)
ATP-cone	PF03477.11	gi|297621961|ref|YP_003710098.1|	-	2e-16	60.1	0.4	3.8e-16	59.2	0.2	1.5	1	1	0	1	1	1	1	ATP	cone	domain
zf-DBF	PF07535.7	gi|297621961|ref|YP_003710098.1|	-	0.022	14.4	0.1	0.095	12.3	0.0	2.0	2	0	0	2	2	2	0	DBF	zinc	finger
Zn_Tnp_IS1595	PF12760.2	gi|297621961|ref|YP_003710098.1|	-	0.028	14.2	0.8	0.05	13.4	0.5	1.4	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Nab1	PF04902.7	gi|297621961|ref|YP_003710098.1|	-	0.063	12.7	0.1	0.087	12.3	0.1	1.2	1	0	0	1	1	1	0	Conserved	region	in	Nab1
zf-ribbon_3	PF13248.1	gi|297621961|ref|YP_003710098.1|	-	0.11	11.7	0.1	0.19	10.9	0.0	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-C2H2	PF00096.21	gi|297621961|ref|YP_003710098.1|	-	0.13	12.6	1.0	22	5.6	0.1	2.7	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
TF_Zn_Ribbon	PF08271.7	gi|297621961|ref|YP_003710098.1|	-	0.2	10.9	1.2	0.92	8.8	0.1	2.4	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-ISL3	PF14690.1	gi|297621961|ref|YP_003710098.1|	-	0.52	10.3	3.4	0.65	10.0	0.0	2.6	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Phage_CII	PF05269.6	gi|297621963|ref|YP_003710100.1|	-	1.6e-06	28.0	0.2	0.0054	16.6	0.0	3.4	3	0	0	3	3	3	2	Bacteriophage	CII	protein
Pkinase_Tyr	PF07714.12	gi|297621963|ref|YP_003710100.1|	-	0.046	12.7	0.0	0.11	11.5	0.0	1.6	1	0	0	1	1	1	0	Protein	tyrosine	kinase
Lysine_decarbox	PF03641.9	gi|297621964|ref|YP_003710101.1|	-	1.6e-24	86.1	0.0	2.9e-24	85.3	0.0	1.4	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
HSCB_C	PF07743.8	gi|297621964|ref|YP_003710101.1|	-	0.58	10.6	2.7	1.2	9.6	0.1	2.5	2	1	1	3	3	3	0	HSCB	C-terminal	oligomerisation	domain
Methyltransf_4	PF02390.12	gi|297621965|ref|YP_003710102.1|	-	0.0069	15.4	0.0	0.0087	15.1	0.0	1.1	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_18	PF12847.2	gi|297621965|ref|YP_003710102.1|	-	0.012	16.2	0.0	0.019	15.5	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297621965|ref|YP_003710102.1|	-	0.022	14.3	0.0	0.042	13.4	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
MTS	PF05175.9	gi|297621965|ref|YP_003710102.1|	-	0.075	12.4	0.0	0.11	11.8	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	small	domain
CheR_N	PF03705.10	gi|297621966|ref|YP_003710103.1|	-	0.034	13.5	0.0	0.05	12.9	0.0	1.3	1	0	0	1	1	1	0	CheR	methyltransferase,	all-alpha	domain
Lon_C	PF05362.8	gi|297621968|ref|YP_003710105.1|	-	3.9e-50	170.0	1.5	6.5e-50	169.2	1.1	1.4	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
AAA	PF00004.24	gi|297621968|ref|YP_003710105.1|	-	9.9e-14	51.6	0.0	5.6e-13	49.2	0.0	2.3	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TIP49	PF06068.8	gi|297621968|ref|YP_003710105.1|	-	2.6e-05	23.1	0.2	6.9e-05	21.7	0.0	1.7	2	0	0	2	2	2	1	TIP49	C-terminus
ChlI	PF13541.1	gi|297621968|ref|YP_003710105.1|	-	8.9e-05	21.9	0.0	0.00026	20.4	0.0	1.9	2	0	0	2	2	2	1	Subunit	ChlI	of	Mg-chelatase
AAA_5	PF07728.9	gi|297621968|ref|YP_003710105.1|	-	0.00019	21.1	0.0	0.0015	18.2	0.0	2.4	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.1	gi|297621968|ref|YP_003710105.1|	-	0.00055	20.7	0.2	0.0041	17.9	0.1	2.7	1	1	0	1	1	1	1	AAA	domain
IQ	PF00612.22	gi|297621968|ref|YP_003710105.1|	-	0.00072	18.9	0.1	0.0022	17.4	0.1	1.8	1	0	0	1	1	1	1	IQ	calmodulin-binding	motif
AAA_22	PF13401.1	gi|297621968|ref|YP_003710105.1|	-	0.0012	19.0	0.1	0.013	15.6	0.0	2.8	2	1	0	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|297621968|ref|YP_003710105.1|	-	0.0015	18.2	0.1	0.0066	16.1	0.0	2.1	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|297621968|ref|YP_003710105.1|	-	0.0037	17.2	0.0	0.017	15.0	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
UPF0079	PF02367.12	gi|297621968|ref|YP_003710105.1|	-	0.0039	16.8	0.0	0.011	15.3	0.0	1.7	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
Torsin	PF06309.6	gi|297621968|ref|YP_003710105.1|	-	0.057	13.3	0.0	0.17	11.7	0.0	1.8	1	0	0	1	1	1	0	Torsin
KaiC	PF06745.8	gi|297621968|ref|YP_003710105.1|	-	0.36	9.9	5.1	0.44	9.6	0.0	3.3	3	1	0	4	4	4	0	KaiC
Inositol_P	PF00459.20	gi|297621969|ref|YP_003710106.1|	-	2.2e-72	243.6	0.0	2.5e-72	243.4	0.0	1.0	1	0	0	1	1	1	1	Inositol	monophosphatase	family
BPL_N	PF09825.4	gi|297621970|ref|YP_003710107.1|	-	3e-78	263.2	0.5	4.9e-78	262.4	0.0	1.5	2	0	0	2	2	2	1	Biotin-protein	ligase,	N	terminal
GATase_3	PF07685.9	gi|297621970|ref|YP_003710107.1|	-	0.00011	21.8	0.0	0.00023	20.8	0.0	1.5	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.23	gi|297621970|ref|YP_003710107.1|	-	0.003	17.0	0.0	0.0055	16.1	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Glyco_hydro_42M	PF08532.5	gi|297621970|ref|YP_003710107.1|	-	0.023	13.8	0.1	0.57	9.3	0.0	2.2	2	0	0	2	2	2	0	Beta-galactosidase	trimerisation	domain
BioY	PF02632.9	gi|297621971|ref|YP_003710108.1|	-	5.3e-31	107.2	17.2	5.9e-31	107.1	12.0	1.0	1	0	0	1	1	1	1	BioY	family
DUF4112	PF13430.1	gi|297621971|ref|YP_003710108.1|	-	0.29	11.0	3.5	7.3	6.5	2.2	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4112)
DUF2029	PF09594.5	gi|297621972|ref|YP_003710109.1|	-	0.00055	19.5	0.0	0.00055	19.5	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2029)
Rhodanese	PF00581.15	gi|297621974|ref|YP_003710111.1|	-	9.2e-24	83.9	0.0	1.2e-12	48.1	0.0	2.6	2	0	0	2	2	2	2	Rhodanese-like	domain
Lactamase_B	PF00753.22	gi|297621974|ref|YP_003710111.1|	-	1e-17	64.4	0.1	2e-17	63.4	0.1	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_5	PF14597.1	gi|297621974|ref|YP_003710111.1|	-	0.011	15.0	0.0	0.019	14.3	0.0	1.3	1	0	0	1	1	1	0	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|297621974|ref|YP_003710111.1|	-	0.11	12.0	0.0	0.27	10.7	0.0	1.6	1	0	0	1	1	1	0	Beta-lactamase	superfamily	domain
FUSC_2	PF13515.1	gi|297621975|ref|YP_003710112.1|	-	2.1e-14	53.5	15.0	3e-14	53.0	10.4	1.2	1	0	0	1	1	1	1	Fusaric	acid	resistance	protein-like
FUSC	PF04632.7	gi|297621975|ref|YP_003710112.1|	-	2.2e-13	49.5	4.4	4.3e-13	48.6	3.1	1.5	1	1	0	1	1	1	1	Fusaric	acid	resistance	protein	family
DUF939	PF06081.6	gi|297621975|ref|YP_003710112.1|	-	3.7e-12	46.2	7.0	8.5e-12	45.1	4.9	1.6	1	1	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF939)
DUF3353	PF11833.3	gi|297621975|ref|YP_003710112.1|	-	0.0048	16.3	0.8	0.011	15.2	0.5	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3353)
Ribosomal_L29	PF00831.18	gi|297621975|ref|YP_003710112.1|	-	0.024	14.3	3.3	0.033	13.8	1.2	2.1	1	1	1	2	2	2	0	Ribosomal	L29	protein
DUF29	PF01724.11	gi|297621975|ref|YP_003710112.1|	-	0.055	13.3	3.8	0.26	11.0	0.1	2.6	2	2	1	3	3	3	0	Domain	of	unknown	function	DUF29
COG5	PF10392.4	gi|297621975|ref|YP_003710112.1|	-	0.16	11.9	7.1	3.4	7.6	1.2	2.6	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
Erf4	PF10256.4	gi|297621975|ref|YP_003710112.1|	-	0.39	10.5	5.4	3.2	7.6	0.0	3.8	3	2	1	4	4	4	0	Golgin	subfamily	A	member	7/ERF4	family
ALMT	PF11744.3	gi|297621975|ref|YP_003710112.1|	-	0.78	8.3	17.1	17	3.9	11.9	2.3	1	1	0	1	1	1	0	Aluminium	activated	malate	transporter
DUF1192	PF06698.6	gi|297621975|ref|YP_003710112.1|	-	2	8.3	6.8	0.85	9.4	1.7	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1192)
UVR	PF02151.14	gi|297621975|ref|YP_003710112.1|	-	4.8	6.8	7.2	1	8.9	0.1	3.1	3	0	0	3	3	3	0	UvrB/uvrC	motif
TraE	PF05309.6	gi|297621976|ref|YP_003710113.1|	-	0.0056	15.8	0.1	0.0087	15.2	0.1	1.3	1	0	0	1	1	1	1	TraE	protein
DUF3578	PF12102.3	gi|297621976|ref|YP_003710113.1|	-	0.11	12.0	0.1	0.18	11.4	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3578)
Coprogen_oxidas	PF01218.13	gi|297621977|ref|YP_003710114.1|	-	5.7e-93	310.7	0.4	6.7e-93	310.4	0.3	1.0	1	0	0	1	1	1	1	Coproporphyrinogen	III	oxidase
tRNA_edit	PF04073.10	gi|297621978|ref|YP_003710115.1|	-	7.1e-26	90.4	0.0	8.8e-26	90.1	0.0	1.1	1	0	0	1	1	1	1	Aminoacyl-tRNA	editing	domain
TroA	PF01297.12	gi|297621979|ref|YP_003710116.1|	-	4.7e-61	206.2	0.0	5.4e-61	206.0	0.0	1.0	1	0	0	1	1	1	1	Periplasmic	solute	binding	protein	family
TPR_6	PF13174.1	gi|297621979|ref|YP_003710116.1|	-	0.07	13.6	0.1	4.5	7.9	0.0	2.5	2	0	0	2	2	2	0	Tetratricopeptide	repeat
ABC_tran	PF00005.22	gi|297621980|ref|YP_003710117.1|	-	1.1e-29	103.4	0.0	1.5e-29	103.0	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297621980|ref|YP_003710117.1|	-	4.5e-12	46.5	0.8	6.9e-05	22.9	0.1	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|297621980|ref|YP_003710117.1|	-	3e-05	23.3	0.2	0.062	12.5	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|297621980|ref|YP_003710117.1|	-	0.00031	20.8	0.1	0.004	17.2	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|297621980|ref|YP_003710117.1|	-	0.00034	21.0	1.2	0.00064	20.1	0.8	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|297621980|ref|YP_003710117.1|	-	0.0015	17.6	0.3	0.11	11.5	0.1	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.24	gi|297621980|ref|YP_003710117.1|	-	0.0053	16.9	1.8	0.14	12.3	1.2	2.2	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_13	PF13166.1	gi|297621980|ref|YP_003710117.1|	-	0.015	13.7	0.1	0.47	8.8	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|297621980|ref|YP_003710117.1|	-	0.025	14.0	0.0	0.037	13.5	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
SbcCD_C	PF13558.1	gi|297621980|ref|YP_003710117.1|	-	0.036	13.9	0.1	0.44	10.4	0.1	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_10	PF12846.2	gi|297621980|ref|YP_003710117.1|	-	0.049	13.0	0.4	0.11	11.9	0.3	1.5	1	0	0	1	1	1	0	AAA-like	domain
ArgK	PF03308.11	gi|297621980|ref|YP_003710117.1|	-	0.065	11.9	0.0	0.095	11.4	0.0	1.2	1	0	0	1	1	1	0	ArgK	protein
AAA_29	PF13555.1	gi|297621980|ref|YP_003710117.1|	-	0.087	12.3	0.1	0.2	11.2	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.7	gi|297621980|ref|YP_003710117.1|	-	0.25	10.9	1.0	0.42	10.2	0.7	1.7	1	1	0	1	1	1	0	NACHT	domain
ABC-3	PF00950.12	gi|297621981|ref|YP_003710118.1|	-	9.7e-70	234.7	31.5	1.1e-69	234.6	21.9	1.0	1	0	0	1	1	1	1	ABC	3	transport	family
FecCD	PF01032.13	gi|297621981|ref|YP_003710118.1|	-	2.8e-06	26.3	34.2	7.1e-06	25.0	23.7	1.7	1	1	0	1	1	1	1	FecCD	transport	family
AAA_14	PF13173.1	gi|297621982|ref|YP_003710119.1|	-	1.2e-24	86.5	0.1	1.1e-23	83.5	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
DUF4143	PF13635.1	gi|297621982|ref|YP_003710119.1|	-	3.3e-10	39.9	0.2	8.1e-10	38.7	0.1	1.8	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4143)
AAA_17	PF13207.1	gi|297621982|ref|YP_003710119.1|	-	3e-07	31.2	0.1	2.1e-06	28.5	0.0	2.6	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|297621982|ref|YP_003710119.1|	-	0.00019	21.2	0.3	0.026	14.2	0.0	2.8	2	1	1	3	3	3	1	Archaeal	ATPase
AAA_22	PF13401.1	gi|297621982|ref|YP_003710119.1|	-	0.00038	20.5	0.2	0.13	12.4	0.0	3.1	2	2	1	3	3	3	1	AAA	domain
Rad17	PF03215.10	gi|297621982|ref|YP_003710119.1|	-	0.0074	15.0	0.0	0.011	14.4	0.0	1.2	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA	PF00004.24	gi|297621982|ref|YP_003710119.1|	-	0.014	15.6	0.0	0.091	12.9	0.0	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|297621982|ref|YP_003710119.1|	-	0.016	15.2	0.7	0.18	11.7	0.0	2.6	2	2	1	3	3	3	0	AAA	ATPase	domain
HTH_36	PF13730.1	gi|297621982|ref|YP_003710119.1|	-	0.034	14.2	0.0	0.087	12.9	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|297621982|ref|YP_003710119.1|	-	0.036	13.6	0.0	0.099	12.2	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
T2SE	PF00437.15	gi|297621982|ref|YP_003710119.1|	-	0.044	12.6	0.0	0.12	11.2	0.0	1.7	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
RNA_helicase	PF00910.17	gi|297621982|ref|YP_003710119.1|	-	0.087	13.0	0.0	0.25	11.5	0.0	1.8	2	0	0	2	2	2	0	RNA	helicase
HTH_28	PF13518.1	gi|297621982|ref|YP_003710119.1|	-	0.096	12.7	1.5	0.22	11.5	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
NB-ARC	PF00931.17	gi|297621982|ref|YP_003710119.1|	-	0.12	11.2	0.2	2.4	6.9	0.0	2.2	1	1	1	2	2	2	0	NB-ARC	domain
AAA_25	PF13481.1	gi|297621982|ref|YP_003710119.1|	-	0.14	11.5	0.0	0.31	10.4	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
SRPRB	PF09439.5	gi|297621982|ref|YP_003710119.1|	-	0.15	11.2	0.0	0.49	9.6	0.0	1.7	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
AAA_23	PF13476.1	gi|297621982|ref|YP_003710119.1|	-	0.18	12.1	1.4	0.4	10.9	0.0	2.1	2	1	1	3	3	3	0	AAA	domain
HTH_23	PF13384.1	gi|297621982|ref|YP_003710119.1|	-	0.29	10.8	2.2	0.98	9.1	0.0	2.5	2	0	0	2	2	2	0	Homeodomain-like	domain
DnaB_C	PF03796.10	gi|297621983|ref|YP_003710120.1|	-	2e-102	341.5	0.0	2.8e-102	341.0	0.0	1.2	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
DnaB	PF00772.16	gi|297621983|ref|YP_003710120.1|	-	8.9e-26	89.7	0.1	3.5e-25	87.8	0.0	2.0	2	0	0	2	2	2	1	DnaB-like	helicase	N	terminal	domain
AAA_25	PF13481.1	gi|297621983|ref|YP_003710120.1|	-	3.2e-15	56.0	0.0	5.3e-15	55.3	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|297621983|ref|YP_003710120.1|	-	0.0061	16.7	0.1	0.074	13.2	0.0	2.5	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
KaiC	PF06745.8	gi|297621983|ref|YP_003710120.1|	-	0.068	12.2	0.0	0.15	11.1	0.0	1.6	1	0	0	1	1	1	0	KaiC
AAA_19	PF13245.1	gi|297621983|ref|YP_003710120.1|	-	0.12	12.1	0.0	0.27	11.0	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
GIDA	PF01134.17	gi|297621984|ref|YP_003710121.1|	-	3.5e-164	546.3	0.1	5.9e-164	545.5	0.0	1.4	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
GIDA_assoc_3	PF13932.1	gi|297621984|ref|YP_003710121.1|	-	1.6e-29	101.7	0.0	6.2e-29	99.8	0.0	2.1	1	0	0	1	1	1	1	GidA	associated	domain	3
FAD_oxidored	PF12831.2	gi|297621984|ref|YP_003710121.1|	-	1.1e-07	31.2	1.1	2e-07	30.4	0.8	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
DAO	PF01266.19	gi|297621984|ref|YP_003710121.1|	-	3.6e-07	29.4	0.4	0.0014	17.6	0.0	2.4	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|297621984|ref|YP_003710121.1|	-	5.8e-06	26.3	0.3	1.4e-05	25.0	0.2	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|297621984|ref|YP_003710121.1|	-	1.1e-05	24.4	1.8	0.00058	18.8	0.4	2.3	2	0	0	2	2	2	2	FAD	binding	domain
HI0933_like	PF03486.9	gi|297621984|ref|YP_003710121.1|	-	0.04	12.4	4.3	0.15	10.4	0.5	2.5	3	0	0	3	3	3	0	HI0933-like	protein
Pyr_redox	PF00070.22	gi|297621984|ref|YP_003710121.1|	-	0.043	14.2	2.2	0.081	13.3	0.1	2.3	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|297621984|ref|YP_003710121.1|	-	0.16	11.0	1.3	0.32	10.0	0.9	1.6	1	1	0	1	1	1	0	Thi4	family
Lycopene_cycl	PF05834.7	gi|297621984|ref|YP_003710121.1|	-	0.21	10.4	0.5	2.5	6.9	0.2	2.2	2	0	0	2	2	2	0	Lycopene	cyclase	protein
BPL_LplA_LipB	PF03099.14	gi|297621985|ref|YP_003710122.1|	-	4.8e-14	52.4	0.0	7.1e-14	51.8	0.0	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
SpoU_methylase	PF00588.14	gi|297621986|ref|YP_003710123.1|	-	2.6e-40	137.5	0.0	4.6e-40	136.7	0.0	1.4	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
SpoU_sub_bind	PF08032.7	gi|297621986|ref|YP_003710123.1|	-	2.2e-09	37.3	0.0	5.6e-09	36.0	0.0	1.7	2	0	0	2	2	2	1	RNA	2'-O	ribose	methyltransferase	substrate	binding
Delta_lysin	PF05372.6	gi|297621986|ref|YP_003710123.1|	-	0.13	11.6	0.2	0.27	10.6	0.1	1.6	1	0	0	1	1	1	0	Delta	lysin	family
Aconitase_C	PF00694.14	gi|297621988|ref|YP_003710125.1|	-	0.079	13.0	0.3	2	8.5	0.0	2.8	3	0	0	3	3	3	0	Aconitase	C-terminal	domain
PMT_2	PF13231.1	gi|297621989|ref|YP_003710126.1|	-	4.7e-18	65.5	37.4	7.8e-18	64.8	13.5	2.6	2	0	0	2	2	2	2	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT	PF02366.13	gi|297621989|ref|YP_003710126.1|	-	7.5e-08	32.0	16.6	7.5e-08	32.0	11.5	2.3	2	0	0	2	2	2	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
Fer2_3	PF13085.1	gi|297621990|ref|YP_003710127.1|	-	8.6e-26	89.9	1.2	1e-25	89.7	0.0	1.7	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.1	gi|297621990|ref|YP_003710127.1|	-	5.7e-07	29.4	10.5	5.7e-07	29.4	5.0	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|297621990|ref|YP_003710127.1|	-	1.3e-06	28.7	9.6	0.00041	20.6	0.0	2.7	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|297621990|ref|YP_003710127.1|	-	1.3e-05	25.4	7.9	0.0052	17.1	0.5	3.0	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|297621990|ref|YP_003710127.1|	-	1.4e-05	25.2	7.6	0.0046	17.1	0.4	3.0	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|297621990|ref|YP_003710127.1|	-	1.4e-05	25.3	6.9	1.4e-05	25.3	4.8	2.3	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|297621990|ref|YP_003710127.1|	-	0.00089	19.9	6.6	0.00089	19.9	4.6	2.2	2	1	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.1	gi|297621990|ref|YP_003710127.1|	-	0.0032	17.2	17.0	0.0032	17.2	8.2	2.9	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297621990|ref|YP_003710127.1|	-	0.0052	16.6	6.1	0.0052	16.6	4.2	3.4	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|297621990|ref|YP_003710127.1|	-	0.33	10.6	5.5	5.6	6.6	0.0	2.5	3	0	0	3	3	3	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4	PF00037.22	gi|297621990|ref|YP_003710127.1|	-	1.4	8.6	17.6	0.23	11.0	3.0	3.2	3	0	0	3	3	3	0	4Fe-4S	binding	domain
FAD_binding_2	PF00890.19	gi|297621991|ref|YP_003710128.1|	-	5.4e-68	229.7	0.0	9.4e-68	228.9	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|297621991|ref|YP_003710128.1|	-	2.3e-35	121.2	0.6	3.6e-35	120.6	0.4	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
GIDA	PF01134.17	gi|297621991|ref|YP_003710128.1|	-	4.7e-06	25.7	2.2	6.9e-05	21.8	1.8	2.3	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|297621991|ref|YP_003710128.1|	-	2.8e-05	23.2	0.0	0.0001	21.3	0.0	1.9	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|297621991|ref|YP_003710128.1|	-	4.3e-05	23.4	6.2	0.00018	21.4	1.6	2.9	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|297621991|ref|YP_003710128.1|	-	0.00044	20.2	1.2	0.0012	18.8	0.8	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.22	gi|297621991|ref|YP_003710128.1|	-	0.00053	20.3	0.7	0.0046	17.3	0.3	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_7	PF13241.1	gi|297621991|ref|YP_003710128.1|	-	0.00056	20.1	0.1	0.0019	18.4	0.0	2.0	2	0	0	2	2	1	1	Putative	NAD(P)-binding
HI0933_like	PF03486.9	gi|297621991|ref|YP_003710128.1|	-	0.0008	17.9	3.4	0.0025	16.3	0.7	2.4	2	1	0	2	2	2	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|297621991|ref|YP_003710128.1|	-	0.00088	18.4	0.6	0.0016	17.5	0.4	1.3	1	0	0	1	1	1	1	FAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|297621991|ref|YP_003710128.1|	-	0.0014	18.2	0.0	0.0029	17.1	0.0	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_oxidored	PF12831.2	gi|297621991|ref|YP_003710128.1|	-	0.0024	17.0	1.5	0.0047	16.0	1.1	1.5	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Adaptin_binding	PF10199.4	gi|297621991|ref|YP_003710128.1|	-	0.0098	16.1	0.7	0.019	15.2	0.5	1.4	1	0	0	1	1	1	1	Alpha	and	gamma	adaptin	binding	protein	p34
Pyr_redox_3	PF13738.1	gi|297621991|ref|YP_003710128.1|	-	0.012	15.7	0.0	0.083	12.9	0.0	2.3	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|297621991|ref|YP_003710128.1|	-	0.013	14.6	0.3	0.036	13.1	0.1	1.8	2	0	0	2	2	2	0	Thi4	family
Lycopene_cycl	PF05834.7	gi|297621991|ref|YP_003710128.1|	-	0.079	11.8	2.0	0.062	12.1	0.2	1.7	2	0	0	2	2	2	0	Lycopene	cyclase	protein
IlvN	PF07991.7	gi|297621991|ref|YP_003710128.1|	-	0.11	11.8	0.1	0.22	10.8	0.1	1.4	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
3HCDH_N	PF02737.13	gi|297621991|ref|YP_003710128.1|	-	0.34	10.5	3.0	0.28	10.8	0.4	2.1	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Sdh_cyt	PF01127.17	gi|297621992|ref|YP_003710129.1|	-	4.4e-09	36.2	23.1	8.1e-06	25.6	3.3	3.1	2	1	0	3	3	3	3	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
DUF4405	PF14358.1	gi|297621992|ref|YP_003710129.1|	-	0.027	14.6	0.7	0.027	14.6	0.5	3.4	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4405)
DUF1691	PF07950.6	gi|297621992|ref|YP_003710129.1|	-	0.31	10.9	13.0	0.098	12.5	1.2	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1691)
TrmE_N	PF10396.4	gi|297621993|ref|YP_003710130.1|	-	2.3e-40	137.1	0.1	5.4e-40	135.9	0.0	1.7	1	0	0	1	1	1	1	GTP-binding	protein	TrmE	N-terminus
MMR_HSR1	PF01926.18	gi|297621993|ref|YP_003710130.1|	-	3.7e-27	94.5	0.0	7.1e-27	93.6	0.0	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
GTPase_Cys_C	PF12631.2	gi|297621993|ref|YP_003710130.1|	-	1e-18	67.4	0.4	5.5e-18	65.1	0.0	2.5	3	0	0	3	3	2	1	Catalytic	cysteine-containing	C-terminus	of	GTPase,	MnmE
FeoB_N	PF02421.13	gi|297621993|ref|YP_003710130.1|	-	3.2e-12	45.9	0.0	6.9e-11	41.6	0.0	2.3	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
AIG1	PF04548.11	gi|297621993|ref|YP_003710130.1|	-	2e-08	33.5	0.1	1.7e-07	30.6	0.0	2.2	2	0	0	2	2	2	1	AIG1	family
GTP_EFTU	PF00009.22	gi|297621993|ref|YP_003710130.1|	-	6.7e-07	28.9	0.0	0.00076	18.9	0.0	3.5	2	1	1	3	3	3	1	Elongation	factor	Tu	GTP	binding	domain
Dynamin_N	PF00350.18	gi|297621993|ref|YP_003710130.1|	-	1.3e-06	28.3	0.0	0.028	14.2	0.0	2.5	1	1	1	2	2	2	2	Dynamin	family
Miro	PF08477.8	gi|297621993|ref|YP_003710130.1|	-	6.5e-06	26.6	0.0	1.2e-05	25.7	0.0	1.5	1	0	0	1	1	1	1	Miro-like	protein
Gtr1_RagA	PF04670.7	gi|297621993|ref|YP_003710130.1|	-	0.0011	18.1	0.0	0.0044	16.1	0.0	1.9	2	0	0	2	2	2	1	Gtr1/RagA	G	protein	conserved	region
GCV_T	PF01571.16	gi|297621993|ref|YP_003710130.1|	-	0.0041	16.5	0.0	0.011	15.0	0.0	1.6	1	0	0	1	1	1	1	Aminomethyltransferase	folate-binding	domain
Ras	PF00071.17	gi|297621993|ref|YP_003710130.1|	-	0.0051	16.2	0.0	0.065	12.6	0.0	2.6	2	1	0	2	2	2	1	Ras	family
AAA_17	PF13207.1	gi|297621993|ref|YP_003710130.1|	-	0.0068	17.2	0.0	0.017	15.9	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|297621993|ref|YP_003710130.1|	-	0.0094	15.1	0.0	0.025	13.7	0.0	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|297621993|ref|YP_003710130.1|	-	0.012	15.6	0.1	0.091	12.7	0.0	2.2	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_28	PF13521.1	gi|297621993|ref|YP_003710130.1|	-	0.017	15.0	0.0	0.033	14.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
PduV-EutP	PF10662.4	gi|297621993|ref|YP_003710130.1|	-	0.041	13.3	0.0	5.2	6.5	0.0	2.7	2	1	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_18	PF13238.1	gi|297621993|ref|YP_003710130.1|	-	0.081	13.2	0.0	0.21	11.8	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|297621993|ref|YP_003710130.1|	-	0.11	11.8	0.1	3.8	6.8	0.0	2.7	3	0	0	3	3	3	0	AAA	domain
HhH-GPD	PF00730.20	gi|297621994|ref|YP_003710131.1|	-	2.8e-24	85.4	0.0	1.1e-23	83.5	0.0	1.8	2	0	0	2	2	2	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.18	gi|297621994|ref|YP_003710131.1|	-	1e-08	34.4	0.1	7.1e-08	31.7	0.0	2.3	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
DUF2400	PF09674.5	gi|297621994|ref|YP_003710131.1|	-	0.066	12.8	0.1	0.17	11.5	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2400)
GAGA	PF09237.6	gi|297621994|ref|YP_003710131.1|	-	0.12	11.9	0.6	0.29	10.7	0.4	1.6	1	0	0	1	1	1	0	GAGA	factor
RuvA_N	PF01330.16	gi|297621995|ref|YP_003710132.1|	-	6.2e-17	61.1	0.5	1.2e-16	60.1	0.1	1.7	2	0	0	2	2	2	1	RuvA	N	terminal	domain
HHH_5	PF14520.1	gi|297621995|ref|YP_003710132.1|	-	1.3e-12	47.6	0.1	3.6e-12	46.2	0.1	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
HHH	PF00633.18	gi|297621995|ref|YP_003710132.1|	-	4.3e-09	35.5	0.3	0.0039	16.8	0.0	2.7	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
RuvA_C	PF07499.8	gi|297621995|ref|YP_003710132.1|	-	4.3e-09	36.3	0.1	8.4e-09	35.4	0.1	1.5	1	0	0	1	1	1	1	RuvA,	C-terminal	domain
HHH_2	PF12826.2	gi|297621995|ref|YP_003710132.1|	-	1.4e-05	24.8	0.1	0.052	13.4	0.0	3.2	1	1	2	3	3	3	2	Helix-hairpin-helix	motif
Transposase_20	PF02371.11	gi|297621995|ref|YP_003710132.1|	-	0.00016	21.7	0.1	0.38	10.8	0.0	2.6	2	0	0	2	2	2	2	Transposase	IS116/IS110/IS902	family
IMS_HHH	PF11798.3	gi|297621995|ref|YP_003710132.1|	-	0.00026	20.8	0.4	0.0071	16.3	0.0	3.2	2	1	1	3	3	3	1	IMS	family	HHH	motif
HHH_8	PF14716.1	gi|297621995|ref|YP_003710132.1|	-	0.00032	20.8	0.1	0.33	11.1	0.0	3.0	3	0	0	3	3	3	1	Helix-hairpin-helix	domain
HHH_3	PF12836.2	gi|297621995|ref|YP_003710132.1|	-	0.00039	20.3	0.0	0.79	9.7	0.0	2.5	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
DNA_pol_lambd_f	PF10391.4	gi|297621995|ref|YP_003710132.1|	-	0.0054	16.2	0.0	3.3	7.3	0.0	2.4	2	0	0	2	2	2	2	Fingers	domain	of	DNA	polymerase	lambda
5_3_exonuc	PF01367.15	gi|297621995|ref|YP_003710132.1|	-	0.0082	16.3	1.5	4.1	7.6	0.0	2.8	2	1	1	3	3	3	2	5'-3'	exonuclease,	C-terminal	SAM	fold
Cdd1	PF11731.3	gi|297621995|ref|YP_003710132.1|	-	0.016	15.1	0.0	3.8	7.4	0.0	2.6	1	1	1	2	2	2	0	Pathogenicity	locus
NDK	PF00334.14	gi|297621995|ref|YP_003710132.1|	-	0.066	12.9	0.0	0.095	12.4	0.0	1.2	1	0	0	1	1	1	0	Nucleoside	diphosphate	kinase
RuvC	PF02075.12	gi|297621996|ref|YP_003710133.1|	-	6.7e-54	181.7	0.0	7.6e-54	181.5	0.0	1.0	1	0	0	1	1	1	1	Crossover	junction	endodeoxyribonuclease	RuvC
MEA1	PF06910.6	gi|297621996|ref|YP_003710133.1|	-	0.069	12.8	0.0	0.095	12.3	0.0	1.2	1	0	0	1	1	1	0	Male	enhanced	antigen	1	(MEA1)
DUF460	PF04312.8	gi|297621996|ref|YP_003710133.1|	-	0.26	10.8	1.1	0.4	10.1	0.3	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF460)
ATG16	PF08614.6	gi|297621997|ref|YP_003710134.1|	-	0.001	18.9	35.6	0.001	18.9	24.7	4.8	1	1	4	5	5	5	1	Autophagy	protein	16	(ATG16)
DUF812	PF05667.6	gi|297621997|ref|YP_003710134.1|	-	0.0015	17.1	43.9	0.0015	17.1	30.4	2.2	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF812)
ERM	PF00769.14	gi|297621997|ref|YP_003710134.1|	-	0.0029	17.2	20.7	0.0029	17.2	14.4	4.2	1	1	3	4	4	4	1	Ezrin/radixin/moesin	family
HALZ	PF02183.13	gi|297621997|ref|YP_003710134.1|	-	0.022	14.4	1.7	0.022	14.4	1.2	8.2	7	3	1	8	8	8	0	Homeobox	associated	leucine	zipper
Filament	PF00038.16	gi|297621997|ref|YP_003710134.1|	-	3.1	7.1	86.0	2.5	7.5	45.4	4.0	1	1	2	3	3	3	0	Intermediate	filament	protein
Glyco_transf_9	PF01075.12	gi|297621998|ref|YP_003710135.1|	-	4.5e-47	160.3	0.0	6.1e-47	159.9	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	family	9	(heptosyltransferase)
PS_pyruv_trans	PF04230.8	gi|297621998|ref|YP_003710135.1|	-	0.054	13.2	0.0	4.6	6.8	0.0	2.3	2	0	0	2	2	2	0	Polysaccharide	pyruvyl	transferase
UDPGP	PF01704.13	gi|297621999|ref|YP_003710136.1|	-	8.7e-26	90.3	0.0	1.2e-25	89.8	0.0	1.1	1	0	0	1	1	1	1	UTP--glucose-1-phosphate	uridylyltransferase
HTH_31	PF13560.1	gi|297622000|ref|YP_003710137.1|	-	0.00041	20.4	0.0	0.0033	17.6	0.0	2.5	3	1	0	3	3	3	1	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|297622000|ref|YP_003710137.1|	-	0.0026	17.5	0.5	0.09	12.6	0.0	3.3	4	1	0	4	4	4	1	Helix-turn-helix
HTH_19	PF12844.2	gi|297622000|ref|YP_003710137.1|	-	0.015	15.3	0.0	0.29	11.1	0.0	2.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF3196	PF11428.3	gi|297622000|ref|YP_003710137.1|	-	0.017	14.4	2.1	0.13	11.5	0.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3196)
Phage_connect_1	PF05135.8	gi|297622000|ref|YP_003710137.1|	-	0.12	12.5	1.9	5.2	7.2	0.2	3.1	3	0	0	3	3	3	0	Phage	gp6-like	head-tail	connector	protein
NAD_Gly3P_dh_C	PF07479.9	gi|297622001|ref|YP_003710138.1|	-	7.9e-46	155.4	0.4	1.3e-45	154.7	0.3	1.3	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	C-terminus
NAD_Gly3P_dh_N	PF01210.18	gi|297622001|ref|YP_003710138.1|	-	1.1e-38	132.4	0.0	1.7e-38	131.7	0.0	1.3	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
3HCDH_N	PF02737.13	gi|297622001|ref|YP_003710138.1|	-	1.1e-05	25.1	0.0	7.3e-05	22.5	0.0	2.3	2	1	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|297622001|ref|YP_003710138.1|	-	3.5e-05	24.1	0.0	8.7e-05	22.8	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.10	gi|297622001|ref|YP_003710138.1|	-	0.00046	20.0	0.0	0.00093	19.0	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ApbA	PF02558.11	gi|297622001|ref|YP_003710138.1|	-	0.0041	16.5	0.0	0.0068	15.8	0.0	1.3	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
UDPG_MGDP_dh_N	PF03721.9	gi|297622001|ref|YP_003710138.1|	-	0.0083	15.5	0.0	0.014	14.8	0.0	1.3	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Semialdhyde_dh	PF01118.19	gi|297622001|ref|YP_003710138.1|	-	0.046	14.0	0.0	0.083	13.1	0.0	1.4	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
FKBP_C	PF00254.23	gi|297622002|ref|YP_003710139.1|	-	3.1e-07	30.3	0.0	6.7e-07	29.2	0.0	1.5	1	0	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
DUF3040	PF11239.3	gi|297622004|ref|YP_003710141.1|	-	0.83	9.7	4.0	1.6	8.8	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3040)
Carb_kinase	PF01256.12	gi|297622005|ref|YP_003710142.1|	-	2.5e-44	151.4	0.0	3.4e-44	150.9	0.0	1.2	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.10	gi|297622005|ref|YP_003710142.1|	-	3.2e-40	137.5	0.0	5.1e-40	136.8	0.0	1.3	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
Phos_pyr_kin	PF08543.7	gi|297622005|ref|YP_003710142.1|	-	0.029	13.5	0.0	0.054	12.6	0.0	1.4	1	0	0	1	1	1	0	Phosphomethylpyrimidine	kinase
Glyco_trans_1_4	PF13692.1	gi|297622006|ref|YP_003710143.1|	-	4.2e-07	30.1	0.0	1.3e-06	28.6	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.15	gi|297622006|ref|YP_003710143.1|	-	2.6e-05	23.7	0.0	4.8e-05	22.8	0.0	1.4	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|297622006|ref|YP_003710143.1|	-	0.0079	15.9	0.1	0.054	13.2	0.0	2.3	2	1	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.1	gi|297622006|ref|YP_003710143.1|	-	0.036	14.1	0.0	0.061	13.4	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	4-like	domain
Turandot	PF07240.6	gi|297622006|ref|YP_003710143.1|	-	0.17	11.3	0.0	0.43	10.0	0.0	1.6	2	0	0	2	2	2	0	Stress-inducible	humoral	factor	Turandot
Glycos_transf_2	PF00535.21	gi|297622007|ref|YP_003710144.1|	-	4.2e-16	59.0	0.0	8.4e-16	58.1	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_4	PF13704.1	gi|297622007|ref|YP_003710144.1|	-	1.6e-11	44.3	0.0	4.1e-11	43.0	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
TPR_14	PF13428.1	gi|297622007|ref|YP_003710144.1|	-	2.3e-05	24.6	0.4	0.24	12.1	0.0	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297622007|ref|YP_003710144.1|	-	6.6e-05	22.9	0.5	0.044	13.9	0.1	2.4	2	0	0	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
Glyco_tranf_2_3	PF13641.1	gi|297622007|ref|YP_003710144.1|	-	0.00011	22.0	0.0	0.00023	21.0	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|297622007|ref|YP_003710144.1|	-	0.00034	19.7	0.0	0.00054	19.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
TPR_7	PF13176.1	gi|297622007|ref|YP_003710144.1|	-	0.00042	19.9	0.2	0.24	11.2	0.0	2.9	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297622007|ref|YP_003710144.1|	-	0.00056	19.8	0.2	0.55	10.2	0.0	2.7	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|297622007|ref|YP_003710144.1|	-	0.0014	18.6	1.5	1.6	9.1	0.1	2.6	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|297622007|ref|YP_003710144.1|	-	0.0023	17.4	3.9	0.54	9.9	0.6	2.8	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|297622007|ref|YP_003710144.1|	-	0.0029	17.2	2.6	1.1	8.9	0.0	2.4	2	0	0	2	2	2	2	TPR	repeat
TPR_8	PF13181.1	gi|297622007|ref|YP_003710144.1|	-	0.0091	15.7	2.3	0.94	9.4	0.2	2.8	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297622007|ref|YP_003710144.1|	-	0.011	15.5	9.9	0.29	11.1	0.8	3.5	4	0	0	4	4	4	0	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297622007|ref|YP_003710144.1|	-	0.023	15.3	0.6	0.63	10.7	0.1	2.3	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|297622007|ref|YP_003710144.1|	-	0.38	11.3	2.6	7.5	7.2	0.1	3.0	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Methyltransf_21	PF05050.7	gi|297622008|ref|YP_003710145.1|	-	9.4e-19	67.9	0.0	3.9e-18	65.9	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	FkbM	domain
Collagen	PF01391.13	gi|297622009|ref|YP_003710146.1|	-	2.9e-32	109.9	102.6	8e-09	34.9	15.7	4.5	1	1	2	3	3	3	3	Collagen	triple	helix	repeat	(20	copies)
VirD1	PF07328.6	gi|297622009|ref|YP_003710146.1|	-	0.14	11.9	0.0	0.24	11.2	0.0	1.2	1	0	0	1	1	1	0	T-DNA	border	endonuclease	VirD1
Brr6_like_C_C	PF10104.4	gi|297622011|ref|YP_003710148.1|	-	0.04	13.4	0.2	0.074	12.5	0.1	1.3	1	0	0	1	1	1	0	Di-sulfide	bridge	nucleocytoplasmic	transport	domain
Glyco_trans_4_4	PF13579.1	gi|297622012|ref|YP_003710149.1|	-	9.4e-11	42.1	0.0	1.7e-10	41.2	0.0	1.4	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_transf_4	PF13439.1	gi|297622012|ref|YP_003710149.1|	-	3.3e-08	33.4	0.0	1.3e-05	25.0	0.0	2.3	2	0	0	2	2	2	2	Glycosyltransferase	Family	4
Glyco_trans_1_4	PF13692.1	gi|297622012|ref|YP_003710149.1|	-	9.2e-05	22.6	0.0	0.00085	19.4	0.0	2.3	2	1	1	3	3	3	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.15	gi|297622012|ref|YP_003710149.1|	-	0.0039	16.6	0.0	0.0082	15.5	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_2	PF00535.21	gi|297622013|ref|YP_003710150.1|	-	3.5e-14	52.8	0.0	6.8e-14	51.9	0.0	1.6	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|297622013|ref|YP_003710150.1|	-	3.3e-11	43.4	0.0	6.2e-11	42.5	0.0	1.4	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|297622013|ref|YP_003710150.1|	-	1.2e-05	25.0	0.1	4.1e-05	23.3	0.0	1.9	2	1	0	2	2	2	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_5	PF13712.1	gi|297622013|ref|YP_003710150.1|	-	0.0016	17.7	0.1	0.061	12.5	0.1	2.2	2	0	0	2	2	2	1	Glycosyltransferase	like	family
Glyco_tranf_2_2	PF10111.4	gi|297622013|ref|YP_003710150.1|	-	0.01	14.9	0.2	0.89	8.5	0.0	2.1	2	0	0	2	2	2	0	Glycosyltransferase	like	family	2
O-antigen_lig	PF13425.1	gi|297622014|ref|YP_003710151.1|	-	1.7e-11	44.2	3.4	1.7e-11	44.2	2.3	2.2	1	1	1	2	2	2	1	O-antigen	ligase	like	membrane	protein
Wzy_C	PF04932.10	gi|297622014|ref|YP_003710151.1|	-	0.00092	19.0	0.1	0.00092	19.0	0.1	2.3	1	1	1	2	2	2	1	O-Antigen	ligase
rve_3	PF13683.1	gi|297622016|ref|YP_003710153.1|	-	1.2e-28	98.4	0.0	2.9e-28	97.1	0.0	1.7	1	0	0	1	1	1	1	Integrase	core	domain
rve	PF00665.21	gi|297622016|ref|YP_003710153.1|	-	4.2e-23	81.7	0.0	9.5e-23	80.5	0.0	1.6	2	0	0	2	2	2	1	Integrase	core	domain
HTH_21	PF13276.1	gi|297622016|ref|YP_003710153.1|	-	7.3e-14	51.5	8.7	1.8e-13	50.2	6.0	1.6	1	0	0	1	1	1	1	HTH-like	domain
DDE_Tnp_IS240	PF13610.1	gi|297622016|ref|YP_003710153.1|	-	0.00026	20.9	0.0	0.00054	19.9	0.0	1.6	1	0	0	1	1	1	1	DDE	domain
rve_2	PF13333.1	gi|297622016|ref|YP_003710153.1|	-	0.034	14.2	0.0	0.3	11.1	0.0	2.4	2	0	0	2	2	2	0	Integrase	core	domain
HTH_23	PF13384.1	gi|297622016|ref|YP_003710153.1|	-	0.058	13.0	2.0	0.75	9.5	0.3	3.0	3	0	0	3	3	3	0	Homeodomain-like	domain
HTH_32	PF13565.1	gi|297622016|ref|YP_003710153.1|	-	0.13	13.0	4.4	0.15	12.8	0.5	2.7	2	1	1	3	3	3	0	Homeodomain-like	domain
HTH_Tnp_1	PF01527.15	gi|297622017|ref|YP_003710154.1|	-	1.1e-17	63.7	0.1	1.3e-17	63.4	0.1	1.1	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.1	gi|297622017|ref|YP_003710154.1|	-	2.6e-07	30.4	0.0	3.8e-07	29.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297622017|ref|YP_003710154.1|	-	3.4e-06	26.5	0.0	6e-06	25.7	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_29	PF13551.1	gi|297622017|ref|YP_003710154.1|	-	6.8e-05	22.9	0.0	8.7e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_Tnp_IS630	PF01710.11	gi|297622017|ref|YP_003710154.1|	-	0.00012	21.7	0.3	0.00013	21.5	0.2	1.1	1	0	0	1	1	1	1	Transposase
HTH_psq	PF05225.11	gi|297622017|ref|YP_003710154.1|	-	0.0014	18.1	0.0	0.0025	17.3	0.0	1.4	1	0	0	1	1	1	1	helix-turn-helix,	Psq	domain
DUF1153	PF06627.6	gi|297622017|ref|YP_003710154.1|	-	0.0016	18.2	0.1	0.0028	17.4	0.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1153)
HTH_17	PF12728.2	gi|297622017|ref|YP_003710154.1|	-	0.0019	18.3	0.1	0.0089	16.2	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
DUF3442	PF11924.3	gi|297622018|ref|YP_003710155.1|	-	3.5e-08	33.3	4.4	6.8e-06	25.8	0.2	2.8	2	1	0	2	2	2	2	Protein	of	unknown	function	(DUF3442)
DivIVA	PF05103.8	gi|297622018|ref|YP_003710155.1|	-	0.011	15.8	5.5	0.063	13.3	4.5	1.6	2	0	0	2	2	2	0	DivIVA	protein
Sugarporin_N	PF11471.3	gi|297622018|ref|YP_003710155.1|	-	0.034	13.7	4.2	0.087	12.4	2.9	1.6	1	1	0	1	1	1	0	Maltoporin	periplasmic	N-terminal	extension
DUF2312	PF10073.4	gi|297622018|ref|YP_003710155.1|	-	0.19	11.1	0.8	0.35	10.2	0.6	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
Collagen	PF01391.13	gi|297622019|ref|YP_003710156.1|	-	1.4e-36	123.8	152.2	4.7e-08	32.4	20.9	5.3	1	1	4	5	5	5	5	Collagen	triple	helix	repeat	(20	copies)
DUF778	PF05608.7	gi|297622021|ref|YP_003710158.1|	-	0.0018	18.2	0.1	0.34	10.8	0.0	3.0	3	0	0	3	3	3	2	Protein	of	unknown	function	(DUF778)
Glyco_trans_4_4	PF13579.1	gi|297622021|ref|YP_003710158.1|	-	0.16	12.0	0.0	0.31	11.1	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	4-like	domain
Pkinase	PF00069.20	gi|297622022|ref|YP_003710159.1|	-	2.2e-20	72.9	0.0	5.1e-20	71.7	0.0	1.6	1	1	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|297622022|ref|YP_003710159.1|	-	1.3e-08	34.2	0.0	2.2e-08	33.4	0.0	1.3	1	0	0	1	1	1	1	Protein	tyrosine	kinase
DUF2263	PF10021.4	gi|297622022|ref|YP_003710159.1|	-	0.0011	18.9	0.0	0.0032	17.4	0.0	1.7	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2263)
ACR_tran	PF00873.14	gi|297622023|ref|YP_003710160.1|	-	3.3e-262	872.3	21.6	4.1e-262	872.0	15.0	1.0	1	0	0	1	1	1	1	AcrB/AcrD/AcrF	family
SecD_SecF	PF02355.11	gi|297622023|ref|YP_003710160.1|	-	0.0014	17.8	32.6	0.0015	17.7	10.8	2.7	3	0	0	3	3	3	2	Protein	export	membrane	protein
Sigma70_r4_2	PF08281.7	gi|297622023|ref|YP_003710160.1|	-	0.1	12.0	0.3	6.8	6.2	0.0	2.8	2	0	0	2	2	2	0	Sigma-70,	region	4
Patched	PF02460.13	gi|297622023|ref|YP_003710160.1|	-	0.17	9.7	13.9	0.25	9.2	9.6	1.2	1	0	0	1	1	1	0	Patched	family
HlyD_2	PF12700.2	gi|297622024|ref|YP_003710161.1|	-	3.1e-23	82.4	0.3	4.7e-23	81.8	0.2	1.3	1	1	0	1	1	1	1	HlyD	family	secretion	protein
HlyD	PF00529.15	gi|297622024|ref|YP_003710161.1|	-	2.2e-22	79.7	0.0	2.6e-22	79.5	0.0	1.1	1	0	0	1	1	1	1	HlyD	family	secretion	protein
Biotin_lipoyl_2	PF13533.1	gi|297622024|ref|YP_003710161.1|	-	2.3e-06	27.1	0.0	3.6e-05	23.3	0.0	2.6	2	0	0	2	2	2	1	Biotin-lipoyl	like
HlyD_3	PF13437.1	gi|297622024|ref|YP_003710161.1|	-	1.2e-05	25.5	0.0	5.3e-05	23.5	0.0	2.1	2	0	0	2	2	2	1	HlyD	family	secretion	protein
OEP	PF02321.13	gi|297622024|ref|YP_003710161.1|	-	0.23	11.0	5.0	0.35	10.4	3.4	1.2	1	0	0	1	1	1	0	Outer	membrane	efflux	protein
FliJ	PF02050.11	gi|297622024|ref|YP_003710161.1|	-	0.8	9.7	7.9	0.056	13.5	1.8	1.8	2	0	0	2	2	2	0	Flagellar	FliJ	protein
OEP	PF02321.13	gi|297622025|ref|YP_003710162.1|	-	2.4e-51	174.0	12.2	1.8e-29	102.7	0.3	2.0	2	0	0	2	2	2	2	Outer	membrane	efflux	protein
Polysacc_synt_3	PF13440.1	gi|297622026|ref|YP_003710163.1|	-	2.4e-10	40.3	19.2	2.4e-10	40.3	13.3	2.9	3	0	0	3	3	3	1	Polysaccharide	biosynthesis	protein
Polysacc_synt	PF01943.12	gi|297622026|ref|YP_003710163.1|	-	2.5e-10	40.0	29.7	2.5e-10	40.0	20.6	2.4	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Methyltransf_23	PF13489.1	gi|297622028|ref|YP_003710165.1|	-	0.0026	17.4	0.0	0.0036	17.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Glycos_transf_1	PF00534.15	gi|297622029|ref|YP_003710166.1|	-	2.7e-25	88.7	0.1	7e-25	87.4	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|297622029|ref|YP_003710166.1|	-	1.2e-11	44.8	0.0	4.1e-11	43.1	0.0	1.9	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|297622029|ref|YP_003710166.1|	-	2.6e-05	24.4	0.0	8.4e-05	22.7	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|297622029|ref|YP_003710166.1|	-	0.068	13.3	0.0	0.093	12.8	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	transferase	4-like	domain
UDPG_MGDP_dh_N	PF03721.9	gi|297622030|ref|YP_003710167.1|	-	4.1e-45	153.4	0.0	6.2e-45	152.8	0.0	1.2	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh	PF00984.14	gi|297622030|ref|YP_003710167.1|	-	9.2e-29	99.5	0.0	1.5e-28	98.8	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.10	gi|297622030|ref|YP_003710167.1|	-	5.4e-22	77.9	0.0	3.1e-20	72.2	0.0	2.3	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
NAD_binding_2	PF03446.10	gi|297622030|ref|YP_003710167.1|	-	1.5e-07	31.3	0.0	2.7e-06	27.3	0.0	2.7	2	1	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|297622030|ref|YP_003710167.1|	-	0.0015	18.2	0.0	0.0037	17.0	0.0	1.7	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
3HCDH_N	PF02737.13	gi|297622030|ref|YP_003710167.1|	-	0.0032	17.1	0.0	0.0065	16.1	0.0	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|297622030|ref|YP_003710167.1|	-	0.014	14.5	0.0	0.036	13.2	0.0	1.8	1	1	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.11	gi|297622030|ref|YP_003710167.1|	-	0.039	13.3	0.0	0.088	12.2	0.0	1.7	1	1	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
AlaDh_PNT_C	PF01262.16	gi|297622030|ref|YP_003710167.1|	-	0.13	11.7	0.0	0.33	10.5	0.0	1.6	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
DegT_DnrJ_EryC1	PF01041.12	gi|297622031|ref|YP_003710168.1|	-	4.4e-115	384.5	0.0	5e-115	384.4	0.0	1.0	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_1_2	PF00155.16	gi|297622031|ref|YP_003710168.1|	-	2.3e-10	39.9	0.0	2.9e-10	39.6	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|297622031|ref|YP_003710168.1|	-	1.7e-09	37.2	0.0	4.3e-09	35.9	0.0	1.7	1	1	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.15	gi|297622031|ref|YP_003710168.1|	-	7.9e-08	30.9	0.0	1.3e-07	30.2	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_5	PF00266.14	gi|297622031|ref|YP_003710168.1|	-	1.1e-06	27.6	0.0	1.5e-06	27.1	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Hexapep	PF00132.19	gi|297622032|ref|YP_003710169.1|	-	1.6e-20	71.6	7.9	7.7e-09	34.6	0.4	3.5	2	1	0	3	3	3	3	Bacterial	transferase	hexapeptide	(six	repeats)
GFO_IDH_MocA	PF01408.17	gi|297622032|ref|YP_003710169.1|	-	1.2e-16	61.2	0.0	2.5e-16	60.2	0.0	1.6	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Hexapep_2	PF14602.1	gi|297622032|ref|YP_003710169.1|	-	4.1e-12	45.4	10.7	2.5e-07	30.1	1.5	3.1	3	0	0	3	3	3	2	Hexapeptide	repeat	of	succinyl-transferase
DUF2613	PF11021.3	gi|297622032|ref|YP_003710169.1|	-	0.047	13.4	0.2	0.11	12.2	0.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2613)
NAD_binding_3	PF03447.11	gi|297622032|ref|YP_003710169.1|	-	0.077	13.3	0.0	0.16	12.3	0.0	1.4	1	0	0	1	1	1	0	Homoserine	dehydrogenase,	NAD	binding	domain
SNF2_N	PF00176.18	gi|297622033|ref|YP_003710170.1|	-	4.7e-53	179.9	0.0	1.6e-52	178.1	0.0	1.8	1	1	0	1	1	1	1	SNF2	family	N-terminal	domain
Helicase_C	PF00271.26	gi|297622033|ref|YP_003710170.1|	-	3e-13	49.4	0.0	8.4e-13	47.9	0.0	1.8	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
OEP	PF02321.13	gi|297622034|ref|YP_003710171.1|	-	3e-59	199.8	17.5	6.8e-31	107.3	5.5	2.0	2	0	0	2	2	2	2	Outer	membrane	efflux	protein
ACR_tran	PF00873.14	gi|297622035|ref|YP_003710172.1|	-	0	1109.8	17.4	0	1109.6	12.1	1.0	1	0	0	1	1	1	1	AcrB/AcrD/AcrF	family
MMPL	PF03176.10	gi|297622035|ref|YP_003710172.1|	-	1.1e-09	37.4	20.1	4.6e-09	35.4	6.3	2.3	2	0	0	2	2	2	2	MMPL	family
SecD_SecF	PF02355.11	gi|297622035|ref|YP_003710172.1|	-	0.0014	17.8	15.3	0.0014	17.8	10.6	2.7	3	0	0	3	3	3	2	Protein	export	membrane	protein
DUF962	PF06127.6	gi|297622035|ref|YP_003710172.1|	-	0.44	10.4	0.0	0.44	10.4	0.0	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF962)
HlyD	PF00529.15	gi|297622036|ref|YP_003710173.1|	-	2.2e-37	129.0	0.0	2.5e-37	128.8	0.0	1.0	1	0	0	1	1	1	1	HlyD	family	secretion	protein
HlyD_2	PF12700.2	gi|297622036|ref|YP_003710173.1|	-	2.4e-25	89.4	0.0	3e-25	89.0	0.0	1.1	1	0	0	1	1	1	1	HlyD	family	secretion	protein
HlyD_3	PF13437.1	gi|297622036|ref|YP_003710173.1|	-	2.1e-13	50.4	0.0	6.1e-08	32.9	0.0	3.1	2	1	0	2	2	2	2	HlyD	family	secretion	protein
Biotin_lipoyl_2	PF13533.1	gi|297622036|ref|YP_003710173.1|	-	1.5e-11	43.7	0.0	7.5e-11	41.5	0.0	2.2	2	1	0	2	2	2	1	Biotin-lipoyl	like
Biotin_lipoyl	PF00364.17	gi|297622036|ref|YP_003710173.1|	-	0.0005	19.6	0.1	0.0017	17.9	0.0	2.0	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Flg_bb_rod	PF00460.15	gi|297622036|ref|YP_003710173.1|	-	0.29	10.8	1.7	0.92	9.2	0.1	2.2	2	0	0	2	2	2	0	Flagella	basal	body	rod	protein
DUF1186	PF06685.6	gi|297622039|ref|YP_003710176.1|	-	3.4e-26	91.9	1.3	4.4e-26	91.5	0.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1186)
SEC-C	PF02810.10	gi|297622039|ref|YP_003710176.1|	-	1.7e-08	33.7	7.3	2.5e-08	33.2	5.0	1.3	1	0	0	1	1	1	1	SEC-C	motif
Conotoxin	PF02950.12	gi|297622040|ref|YP_003710177.1|	-	0.15	12.8	0.2	0.36	11.6	0.0	1.7	2	0	0	2	2	2	0	Conotoxin
RHS_repeat	PF05593.9	gi|297622042|ref|YP_003710179.1|	-	2.8e-39	132.4	66.3	0.00013	22.0	0.0	18.9	15	4	5	21	21	21	14	RHS	Repeat
DUF3089	PF11288.3	gi|297622042|ref|YP_003710179.1|	-	0.057	12.5	0.0	0.11	11.6	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3089)
Cutinase	PF01083.17	gi|297622042|ref|YP_003710179.1|	-	0.058	13.1	0.0	0.17	11.6	0.0	1.7	1	0	0	1	1	1	0	Cutinase
HAD	PF12710.2	gi|297622043|ref|YP_003710180.1|	-	3.2e-24	86.1	0.0	3.7e-24	85.9	0.0	1.0	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|297622043|ref|YP_003710180.1|	-	5.3e-05	23.7	0.0	0.0051	17.2	0.0	2.0	1	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
Epimerase	PF01370.16	gi|297622044|ref|YP_003710181.1|	-	2.1e-51	174.6	0.1	2.5e-51	174.4	0.0	1.0	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|297622044|ref|YP_003710181.1|	-	3.7e-16	58.8	0.0	4.8e-16	58.4	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|297622044|ref|YP_003710181.1|	-	1.3e-15	56.8	0.0	1.7e-15	56.5	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.10	gi|297622044|ref|YP_003710181.1|	-	1.1e-13	50.7	0.0	1.1e-12	47.4	0.0	1.9	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|297622044|ref|YP_003710181.1|	-	8.6e-09	34.6	2.1	1.1e-07	31.0	1.4	2.0	1	1	0	1	1	1	1	Male	sterility	protein
adh_short	PF00106.20	gi|297622044|ref|YP_003710181.1|	-	2.3e-07	30.8	0.0	4.2e-07	30.0	0.0	1.4	1	0	0	1	1	1	1	short	chain	dehydrogenase
Epimerase_Csub	PF13950.1	gi|297622044|ref|YP_003710181.1|	-	1.4e-06	28.0	0.0	2.8e-06	27.1	0.0	1.5	1	0	0	1	1	1	1	UDP-glucose	4-epimerase	C-term	subunit
KR	PF08659.5	gi|297622044|ref|YP_003710181.1|	-	0.00012	21.8	0.0	0.0002	21.0	0.0	1.3	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|297622044|ref|YP_003710181.1|	-	0.00017	21.6	0.0	0.00026	21.0	0.0	1.3	1	0	0	1	1	1	1	NADH(P)-binding
NmrA	PF05368.8	gi|297622044|ref|YP_003710181.1|	-	0.00026	20.3	0.0	0.0012	18.1	0.0	1.9	2	0	0	2	2	2	1	NmrA-like	family
Sigma54_activ_2	PF14532.1	gi|297622044|ref|YP_003710181.1|	-	0.031	14.3	0.0	0.14	12.1	0.0	2.0	1	1	0	1	1	1	0	Sigma-54	interaction	domain
TrkA_N	PF02254.13	gi|297622044|ref|YP_003710181.1|	-	0.042	13.8	0.1	0.086	12.8	0.1	1.5	1	1	0	1	1	1	0	TrkA-N	domain
Y_phosphatase	PF00102.22	gi|297622045|ref|YP_003710182.1|	-	1.3e-32	113.0	0.0	2.2e-32	112.2	0.0	1.3	1	0	0	1	1	1	1	Protein-tyrosine	phosphatase
DSPc	PF00782.15	gi|297622045|ref|YP_003710182.1|	-	1.7e-07	30.8	0.0	1.3e-06	27.9	0.0	2.2	2	1	0	2	2	2	1	Dual	specificity	phosphatase,	catalytic	domain
PTPlike_phytase	PF14566.1	gi|297622045|ref|YP_003710182.1|	-	0.052	13.5	1.2	0.22	11.5	0.8	2.2	1	1	0	1	1	1	0	Inositol	hexakisphosphate
Y_phosphatase3	PF13350.1	gi|297622045|ref|YP_003710182.1|	-	0.086	13.0	0.6	0.23	11.7	0.1	1.8	2	1	0	2	2	2	0	Tyrosine	phosphatase	family
RNase_PH_C	PF03725.10	gi|297622045|ref|YP_003710182.1|	-	0.12	12.2	0.0	0.37	10.7	0.0	1.8	1	0	0	1	1	1	0	3'	exoribonuclease	family,	domain	2
tRNA_U5-meth_tr	PF05958.6	gi|297622046|ref|YP_003710183.1|	-	1.9e-21	76.1	0.0	1.1e-19	70.3	0.0	2.3	1	1	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_31	PF13847.1	gi|297622046|ref|YP_003710183.1|	-	5.5e-14	52.0	0.0	1.1e-13	51.0	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297622046|ref|YP_003710183.1|	-	1.2e-11	44.6	0.0	3.4e-11	43.2	0.0	1.8	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297622046|ref|YP_003710183.1|	-	9.2e-10	39.0	0.0	2.3e-09	37.8	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|297622046|ref|YP_003710183.1|	-	1.8e-09	37.4	0.0	6.1e-09	35.7	0.0	1.7	2	0	0	2	2	2	1	Met-10+	like-protein
MTS	PF05175.9	gi|297622046|ref|YP_003710183.1|	-	6e-09	35.5	0.0	1e-08	34.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
TRAM	PF01938.15	gi|297622046|ref|YP_003710183.1|	-	2.1e-08	33.8	0.4	5.4e-08	32.5	0.3	1.7	1	0	0	1	1	1	1	TRAM	domain
Methyltransf_25	PF13649.1	gi|297622046|ref|YP_003710183.1|	-	3.7e-06	27.2	0.0	5.5e-05	23.4	0.0	2.4	2	0	0	2	2	2	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|297622046|ref|YP_003710183.1|	-	4.2e-06	26.2	0.0	8.4e-06	25.2	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
PCMT	PF01135.14	gi|297622046|ref|YP_003710183.1|	-	6.4e-06	25.8	0.0	1.2e-05	24.8	0.0	1.4	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_15	PF09445.5	gi|297622046|ref|YP_003710183.1|	-	7.3e-06	25.6	0.0	1.6e-05	24.5	0.0	1.5	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
PrmA	PF06325.8	gi|297622046|ref|YP_003710183.1|	-	1.4e-05	24.3	0.0	2.3e-05	23.6	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
UPF0020	PF01170.13	gi|297622046|ref|YP_003710183.1|	-	3.7e-05	23.3	0.1	0.00011	21.8	0.0	1.7	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_11	PF08241.7	gi|297622046|ref|YP_003710183.1|	-	5.7e-05	23.5	0.0	0.00032	21.1	0.0	2.3	3	0	0	3	3	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297622046|ref|YP_003710183.1|	-	0.00022	20.9	0.0	0.0009	18.9	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297622046|ref|YP_003710183.1|	-	0.00083	19.7	0.0	0.0072	16.7	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|297622046|ref|YP_003710183.1|	-	0.0017	17.4	0.0	0.0039	16.3	0.0	1.5	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
TPMT	PF05724.6	gi|297622046|ref|YP_003710183.1|	-	0.0045	16.4	0.1	0.0084	15.5	0.0	1.4	1	0	0	1	1	1	1	Thiopurine	S-methyltransferase	(TPMT)
RrnaAD	PF00398.15	gi|297622046|ref|YP_003710183.1|	-	0.013	14.5	0.0	0.032	13.2	0.0	1.6	2	0	0	2	2	2	0	Ribosomal	RNA	adenine	dimethylase
Methyltransf_4	PF02390.12	gi|297622046|ref|YP_003710183.1|	-	0.018	14.1	0.0	0.054	12.5	0.0	1.7	2	0	0	2	2	2	0	Putative	methyltransferase
NodS	PF05401.6	gi|297622046|ref|YP_003710183.1|	-	0.069	12.5	0.0	0.12	11.7	0.0	1.3	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
CMAS	PF02353.15	gi|297622046|ref|YP_003710183.1|	-	0.082	11.9	0.0	0.13	11.2	0.0	1.3	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
CHAD	PF05235.9	gi|297622048|ref|YP_003710185.1|	-	0.14	11.6	0.1	0.14	11.6	0.1	2.0	3	0	0	3	3	3	0	CHAD	domain
Aldedh	PF00171.17	gi|297622049|ref|YP_003710186.1|	-	2.6e-155	517.2	0.0	3.2e-155	516.9	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
Endonuc_BglI	PF14562.1	gi|297622049|ref|YP_003710186.1|	-	0.095	11.5	0.0	0.15	10.8	0.0	1.2	1	0	0	1	1	1	0	Restriction	endonuclease	BglI
ERG4_ERG24	PF01222.12	gi|297622050|ref|YP_003710187.1|	-	1.9e-103	346.3	16.1	2.3e-103	346.0	11.2	1.1	1	0	0	1	1	1	1	Ergosterol	biosynthesis	ERG4/ERG24	family
Porin_4	PF13609.1	gi|297622051|ref|YP_003710188.1|	-	0.064	12.7	0.1	0.097	12.1	0.1	1.2	1	0	0	1	1	1	0	Gram-negative	porin
UvrD_C	PF13361.1	gi|297622053|ref|YP_003710190.1|	-	2e-91	307.0	0.2	4e-91	306.1	0.1	1.5	2	0	0	2	2	2	1	UvrD-like	helicase	C-terminal	domain
UvrD-helicase	PF00580.16	gi|297622053|ref|YP_003710190.1|	-	7.8e-77	258.6	0.1	2.8e-76	256.8	0.0	2.0	2	1	0	2	2	2	1	UvrD/REP	helicase	N-terminal	domain
AAA_19	PF13245.1	gi|297622053|ref|YP_003710190.1|	-	1.5e-13	50.3	0.2	3.6e-13	49.0	0.1	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
UvrD_C_2	PF13538.1	gi|297622053|ref|YP_003710190.1|	-	8.2e-10	38.7	0.0	2.9e-09	36.9	0.0	2.0	1	0	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
AAA_30	PF13604.1	gi|297622053|ref|YP_003710190.1|	-	5.9e-08	32.5	0.0	5.1e-05	22.9	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
Viral_helicase1	PF01443.13	gi|297622053|ref|YP_003710190.1|	-	6.9e-07	29.0	0.1	0.011	15.3	0.0	3.4	3	1	0	3	3	3	2	Viral	(Superfamily	1)	RNA	helicase
Exonuc_V_gamma	PF04257.9	gi|297622053|ref|YP_003710190.1|	-	0.0082	14.1	0.0	0.013	13.5	0.0	1.2	1	0	0	1	1	1	1	Exodeoxyribonuclease	V,	gamma	subunit
AAA_12	PF13087.1	gi|297622053|ref|YP_003710190.1|	-	0.012	14.9	0.0	0.39	10.0	0.0	2.6	2	1	0	2	2	2	0	AAA	domain
PhoH	PF02562.11	gi|297622053|ref|YP_003710190.1|	-	0.029	13.5	0.1	0.19	10.9	0.0	2.1	2	0	0	2	2	2	0	PhoH-like	protein
AAA_11	PF13086.1	gi|297622053|ref|YP_003710190.1|	-	0.064	12.8	0.0	0.18	11.3	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
Aldedh	PF00171.17	gi|297622054|ref|YP_003710191.1|	-	1.2e-109	366.7	0.0	2.2e-109	365.8	0.0	1.3	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
Pro_dh	PF01619.13	gi|297622054|ref|YP_003710191.1|	-	4.5e-43	147.4	0.1	9.3e-43	146.3	0.1	1.4	1	0	0	1	1	1	1	Proline	dehydrogenase
DUF1343	PF07075.6	gi|297622055|ref|YP_003710192.1|	-	2.4e-126	421.4	0.0	2.7e-126	421.2	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1343)
Cpn10	PF00166.16	gi|297622056|ref|YP_003710193.1|	-	1.4e-29	101.8	0.1	1.5e-29	101.7	0.1	1.0	1	0	0	1	1	1	1	Chaperonin	10	Kd	subunit
Cpn60_TCP1	PF00118.19	gi|297622057|ref|YP_003710194.1|	-	1.4e-118	396.5	14.6	1.6e-118	396.3	10.1	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
Zn-ribbon_8	PF09723.5	gi|297622058|ref|YP_003710195.1|	-	4.4e-12	45.7	3.3	4.4e-12	45.7	2.3	2.1	2	0	0	2	2	2	1	Zinc	ribbon	domain
NOB1_Zn_bind	PF08772.6	gi|297622058|ref|YP_003710195.1|	-	0.052	13.3	0.5	0.052	13.3	0.3	2.1	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
SprT-like	PF10263.4	gi|297622058|ref|YP_003710195.1|	-	0.14	11.8	0.2	0.2	11.2	0.1	1.3	1	0	0	1	1	1	0	SprT-like	family
DUF1451	PF07295.6	gi|297622058|ref|YP_003710195.1|	-	0.18	11.5	0.7	0.25	11.0	0.5	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1451)
PhnA_Zn_Ribbon	PF08274.7	gi|297622058|ref|YP_003710195.1|	-	0.22	11.3	0.2	0.22	11.3	0.1	2.6	3	0	0	3	3	3	0	PhnA	Zinc-Ribbon
zf-C3HC4_3	PF13920.1	gi|297622058|ref|YP_003710195.1|	-	0.51	10.0	5.3	0.13	11.9	0.6	2.0	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
HypA	PF01155.14	gi|297622058|ref|YP_003710195.1|	-	0.69	9.6	4.0	0.45	10.2	0.4	1.9	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
zf-CHY	PF05495.7	gi|297622058|ref|YP_003710195.1|	-	1.8	8.7	5.9	0.16	12.1	0.6	1.7	2	0	0	2	2	2	0	CHY	zinc	finger
DUF1778	PF08681.6	gi|297622060|ref|YP_003710197.1|	-	0.00068	19.4	0.0	0.001	18.8	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1778)
Acetyltransf_7	PF13508.1	gi|297622061|ref|YP_003710198.1|	-	4.8e-12	45.8	0.1	7.4e-12	45.2	0.1	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|297622061|ref|YP_003710198.1|	-	1.8e-11	43.9	0.1	2.7e-11	43.3	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_3	PF13302.1	gi|297622061|ref|YP_003710198.1|	-	1.8e-05	24.9	0.0	2.4e-05	24.5	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|297622061|ref|YP_003710198.1|	-	8.3e-05	22.6	0.0	0.00013	22.0	0.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|297622061|ref|YP_003710198.1|	-	0.0002	21.0	0.0	0.0004	20.0	0.0	1.5	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_8	PF13523.1	gi|297622061|ref|YP_003710198.1|	-	0.00049	20.0	0.0	0.00057	19.7	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
GNAT_acetyltr_2	PF13718.1	gi|297622061|ref|YP_003710198.1|	-	0.01	15.1	0.0	0.015	14.6	0.0	1.4	1	0	0	1	1	1	0	GNAT	acetyltransferase	2
Acetyltransf_9	PF13527.1	gi|297622061|ref|YP_003710198.1|	-	0.018	14.8	0.1	0.047	13.5	0.0	1.7	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|297622061|ref|YP_003710198.1|	-	0.13	12.2	0.0	0.22	11.4	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
TrkH	PF02386.11	gi|297622062|ref|YP_003710199.1|	-	7.8e-39	133.2	27.5	6.1e-37	127.0	16.0	2.3	2	0	0	2	2	2	2	Cation	transport	protein
TrkA_N	PF02254.13	gi|297622063|ref|YP_003710200.1|	-	5.1e-39	132.8	0.1	9.3e-19	67.5	0.0	2.4	2	0	0	2	2	2	2	TrkA-N	domain
TrkA_C	PF02080.16	gi|297622063|ref|YP_003710200.1|	-	1.1e-24	85.7	0.9	1.6e-12	46.8	0.1	2.7	2	0	0	2	2	2	2	TrkA-C	domain
ApbA	PF02558.11	gi|297622063|ref|YP_003710200.1|	-	1.5e-07	30.9	0.1	0.00015	21.1	0.0	2.5	2	0	0	2	2	2	2	Ketopantoate	reductase	PanE/ApbA
3HCDH_N	PF02737.13	gi|297622063|ref|YP_003710200.1|	-	2.7e-07	30.3	0.0	2.3e-05	24.1	0.0	2.2	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.22	gi|297622063|ref|YP_003710200.1|	-	4e-07	30.3	0.1	0.01	16.2	0.0	2.6	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_7	PF13241.1	gi|297622063|ref|YP_003710200.1|	-	1.1e-06	28.8	0.0	0.0012	19.1	0.0	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
Saccharop_dh	PF03435.13	gi|297622063|ref|YP_003710200.1|	-	2.4e-06	26.7	0.0	4.4e-05	22.6	0.0	2.2	2	0	0	2	2	2	1	Saccharopine	dehydrogenase
DAO	PF01266.19	gi|297622063|ref|YP_003710200.1|	-	2.7e-06	26.5	0.0	0.0091	14.9	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Shikimate_DH	PF01488.15	gi|297622063|ref|YP_003710200.1|	-	2.9e-06	27.3	0.0	0.085	12.9	0.0	2.6	2	0	0	2	2	2	2	Shikimate	/	quinate	5-dehydrogenase
FAD_binding_3	PF01494.14	gi|297622063|ref|YP_003710200.1|	-	3.7e-06	26.2	0.0	0.00096	18.3	0.0	2.1	2	0	0	2	2	2	1	FAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|297622063|ref|YP_003710200.1|	-	4.7e-06	26.4	0.0	0.00077	19.2	0.0	2.6	2	1	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_10	PF13460.1	gi|297622063|ref|YP_003710200.1|	-	4.5e-05	23.5	0.0	0.0046	16.9	0.0	2.3	2	0	0	2	2	2	1	NADH(P)-binding
UDPG_MGDP_dh_N	PF03721.9	gi|297622063|ref|YP_003710200.1|	-	4.5e-05	22.9	0.0	0.00063	19.1	0.0	2.5	3	0	0	3	3	3	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|297622063|ref|YP_003710200.1|	-	5.2e-05	23.6	0.1	0.0022	18.3	0.0	2.9	3	0	0	3	3	3	1	NADP	oxidoreductase	coenzyme	F420-dependent
DUF1188	PF06690.6	gi|297622063|ref|YP_003710200.1|	-	7.3e-05	22.0	0.0	0.013	14.6	0.0	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1188)
Pyr_redox_2	PF07992.9	gi|297622063|ref|YP_003710200.1|	-	0.00019	21.3	0.0	0.11	12.4	0.0	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
XdhC_C	PF13478.1	gi|297622063|ref|YP_003710200.1|	-	0.00034	20.9	0.0	0.092	13.0	0.0	2.8	2	1	0	2	2	2	1	XdhC	Rossmann	domain
ADH_zinc_N	PF00107.21	gi|297622063|ref|YP_003710200.1|	-	0.00062	19.3	0.0	8.7	5.9	0.0	4.2	4	0	0	4	4	4	0	Zinc-binding	dehydrogenase
NAD_binding_8	PF13450.1	gi|297622063|ref|YP_003710200.1|	-	0.00073	19.5	0.0	0.31	11.0	0.0	2.6	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|297622063|ref|YP_003710200.1|	-	0.0013	17.3	0.0	0.036	12.5	0.0	2.1	2	0	0	2	2	2	1	HI0933-like	protein
AlaDh_PNT_C	PF01262.16	gi|297622063|ref|YP_003710200.1|	-	0.0017	17.9	0.0	2.5	7.6	0.0	3.4	3	0	0	3	3	3	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Lycopene_cycl	PF05834.7	gi|297622063|ref|YP_003710200.1|	-	0.0026	16.7	0.1	0.17	10.7	0.0	2.1	2	0	0	2	2	2	1	Lycopene	cyclase	protein
2-Hacid_dh_C	PF02826.14	gi|297622063|ref|YP_003710200.1|	-	0.0041	16.2	0.0	0.043	12.9	0.0	2.2	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|297622063|ref|YP_003710200.1|	-	0.0084	15.9	0.0	1.1	9.0	0.0	2.4	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Pyr_redox_3	PF13738.1	gi|297622063|ref|YP_003710200.1|	-	0.0086	16.1	0.0	2.5	8.1	0.0	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|297622063|ref|YP_003710200.1|	-	0.024	13.7	0.1	4.5	6.2	0.0	2.2	2	0	0	2	2	2	0	Thi4	family
Epimerase	PF01370.16	gi|297622063|ref|YP_003710200.1|	-	0.025	14.0	0.0	0.047	13.1	0.0	1.4	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
GFO_IDH_MocA	PF01408.17	gi|297622063|ref|YP_003710200.1|	-	0.083	13.4	0.0	0.49	10.9	0.0	2.2	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Antitoxin-MazE	PF04014.13	gi|297622063|ref|YP_003710200.1|	-	0.096	12.4	1.0	2.5	7.9	0.0	3.1	3	0	0	3	3	2	0	Antidote-toxin	recognition	MazE
B12-binding	PF02310.14	gi|297622063|ref|YP_003710200.1|	-	0.099	12.5	0.0	7.1	6.5	0.0	2.7	3	0	0	3	3	2	0	B12	binding	domain
RHS_repeat	PF05593.9	gi|297622064|ref|YP_003710201.1|	-	2.6e-50	167.6	34.4	5.2e-06	26.4	0.0	20.9	17	4	5	23	23	23	16	RHS	Repeat
NUDIX	PF00293.23	gi|297622065|ref|YP_003710202.1|	-	1.4e-13	50.6	0.0	1.9e-13	50.2	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
Lactamase_B	PF00753.22	gi|297622066|ref|YP_003710203.1|	-	3e-33	115.1	0.7	3.6e-33	114.8	0.5	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|297622066|ref|YP_003710203.1|	-	6.6e-09	35.5	0.2	8.3e-09	35.2	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|297622066|ref|YP_003710203.1|	-	0.0015	18.2	0.0	0.0021	17.7	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_5	PF14597.1	gi|297622066|ref|YP_003710203.1|	-	0.058	12.7	0.0	0.086	12.2	0.0	1.2	1	0	0	1	1	1	0	Metallo-beta-lactamase	superfamily
AhpC-TSA	PF00578.16	gi|297622067|ref|YP_003710204.1|	-	4.2e-41	139.5	0.1	6.9e-41	138.8	0.0	1.3	2	0	0	2	2	2	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|297622067|ref|YP_003710204.1|	-	1e-18	67.2	0.0	1.2e-18	67.0	0.0	1.1	1	0	0	1	1	1	1	Redoxin
1-cysPrx_C	PF10417.4	gi|297622067|ref|YP_003710204.1|	-	1.5e-10	40.5	0.0	3.6e-10	39.3	0.0	1.7	1	0	0	1	1	1	1	C-terminal	domain	of	1-Cys	peroxiredoxin
TRA-1_regulated	PF02343.11	gi|297622067|ref|YP_003710204.1|	-	0.15	11.5	0.4	1.7	8.1	0.3	2.4	1	1	0	1	1	1	0	TRA-1	regulated	protein	R03H10.4
Enolase_C	PF00113.17	gi|297622069|ref|YP_003710206.1|	-	4.8e-128	426.2	0.1	6.2e-128	425.9	0.1	1.1	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.11	gi|297622069|ref|YP_003710206.1|	-	9.2e-51	171.2	0.0	2e-50	170.1	0.0	1.6	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
MAAL_C	PF07476.6	gi|297622069|ref|YP_003710206.1|	-	0.0014	17.6	0.1	0.0022	16.9	0.0	1.3	1	0	0	1	1	1	1	Methylaspartate	ammonia-lyase	C-terminus
MR_MLE_C	PF13378.1	gi|297622069|ref|YP_003710206.1|	-	0.0043	16.9	0.0	0.011	15.7	0.0	1.7	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE	PF01188.16	gi|297622069|ref|YP_003710206.1|	-	0.14	12.7	0.0	0.71	10.4	0.0	2.2	2	1	0	2	2	2	0	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
DUF258	PF03193.11	gi|297622070|ref|YP_003710207.1|	-	1.6e-48	163.9	0.1	2.6e-48	163.2	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
MMR_HSR1	PF01926.18	gi|297622070|ref|YP_003710207.1|	-	8.5e-07	28.9	0.0	2.2e-06	27.6	0.0	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
GTP_EFTU	PF00009.22	gi|297622070|ref|YP_003710207.1|	-	0.001	18.5	0.2	0.013	14.9	0.0	2.6	1	1	1	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
FeoB_N	PF02421.13	gi|297622070|ref|YP_003710207.1|	-	0.0016	17.6	0.1	0.0087	15.3	0.0	2.1	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
ABC_tran	PF00005.22	gi|297622070|ref|YP_003710207.1|	-	0.0021	18.3	0.1	0.0064	16.7	0.0	1.9	2	0	0	2	2	2	1	ABC	transporter
Miro	PF08477.8	gi|297622070|ref|YP_003710207.1|	-	0.0032	17.9	0.0	0.011	16.1	0.0	2.0	1	0	0	1	1	1	1	Miro-like	protein
AAA_28	PF13521.1	gi|297622070|ref|YP_003710207.1|	-	0.02	14.8	3.6	1.4	8.8	0.2	3.2	3	0	0	3	3	3	0	AAA	domain
AAA_29	PF13555.1	gi|297622070|ref|YP_003710207.1|	-	0.024	14.1	0.1	0.043	13.3	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Ras	PF00071.17	gi|297622070|ref|YP_003710207.1|	-	0.026	13.9	0.2	0.93	8.8	0.0	2.3	1	1	1	2	2	2	0	Ras	family
cobW	PF02492.14	gi|297622070|ref|YP_003710207.1|	-	0.031	13.7	1.8	3.4	7.0	0.0	2.8	3	0	0	3	3	3	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_22	PF13401.1	gi|297622070|ref|YP_003710207.1|	-	0.04	14.0	0.2	1.1	9.4	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|297622070|ref|YP_003710207.1|	-	0.043	14.6	1.5	0.71	10.7	0.0	3.0	2	1	0	2	2	2	0	AAA	domain
Dynamin_N	PF00350.18	gi|297622070|ref|YP_003710207.1|	-	0.044	13.6	5.0	0.076	12.8	0.3	2.9	2	1	0	3	3	3	0	Dynamin	family
TolA	PF06519.6	gi|297622070|ref|YP_003710207.1|	-	0.047	13.6	0.1	0.13	12.2	0.1	1.8	1	0	0	1	1	1	0	TolA	C-terminal
AAA_16	PF13191.1	gi|297622070|ref|YP_003710207.1|	-	0.096	12.6	0.0	0.25	11.3	0.0	1.7	1	0	0	1	1	1	0	AAA	ATPase	domain
NMU	PF02070.10	gi|297622071|ref|YP_003710208.1|	-	0.062	12.8	2.4	0.13	11.7	1.7	1.6	1	0	0	1	1	1	0	Neuromedin	U
SpoU_methylase	PF00588.14	gi|297622073|ref|YP_003710210.1|	-	3.2e-30	104.8	0.0	5.2e-30	104.1	0.0	1.3	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
SpoU_sub_bind	PF08032.7	gi|297622073|ref|YP_003710210.1|	-	0.0031	17.6	0.0	0.0084	16.2	0.0	1.8	2	0	0	2	2	2	1	RNA	2'-O	ribose	methyltransferase	substrate	binding
PolyA_pol	PF01743.15	gi|297622074|ref|YP_003710211.1|	-	3.5e-35	120.9	0.1	6.2e-35	120.1	0.0	1.4	1	0	0	1	1	1	1	Poly	A	polymerase	head	domain
PolyA_pol_RNAbd	PF12627.2	gi|297622074|ref|YP_003710211.1|	-	1.7e-12	46.7	0.0	3.7e-12	45.6	0.0	1.6	1	0	0	1	1	1	1	Probable	RNA	and	SrmB-	binding	site	of	polymerase	A
tRNA_NucTran2_2	PF13735.1	gi|297622074|ref|YP_003710211.1|	-	8e-06	25.7	0.0	1.5e-05	24.8	0.0	1.3	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase	domain	2	putative
DNA_mis_repair	PF01119.14	gi|297622075|ref|YP_003710212.1|	-	7.9e-36	122.1	0.0	2.7e-35	120.3	0.0	1.9	2	0	0	2	2	2	1	DNA	mismatch	repair	protein,	C-terminal	domain
MutL_C	PF08676.6	gi|297622075|ref|YP_003710212.1|	-	9e-26	90.2	0.5	2.2e-25	88.9	0.3	1.7	1	0	0	1	1	1	1	MutL	C	terminal	dimerisation	domain
HATPase_c_3	PF13589.1	gi|297622075|ref|YP_003710212.1|	-	5.9e-09	35.6	0.0	1.1e-08	34.8	0.0	1.4	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.21	gi|297622075|ref|YP_003710212.1|	-	1.6e-08	34.2	0.1	6.6e-08	32.2	0.0	2.1	2	1	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PI-PLC-X	PF00388.14	gi|297622075|ref|YP_003710212.1|	-	0.22	10.9	0.9	5.7	6.3	0.1	2.7	2	1	1	3	3	3	0	Phosphatidylinositol-specific	phospholipase	C,	X	domain
Peptidase_M24	PF00557.19	gi|297622076|ref|YP_003710213.1|	-	7.1e-64	215.1	0.0	8.7e-64	214.9	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|297622076|ref|YP_003710213.1|	-	3.8e-21	75.9	0.0	1e-20	74.5	0.0	1.7	2	0	0	2	2	2	1	Creatinase/Prolidase	N-terminal	domain
HTH_7	PF02796.10	gi|297622076|ref|YP_003710213.1|	-	0.039	13.8	0.0	0.15	11.8	0.0	2.0	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
HATPase_c	PF02518.21	gi|297622077|ref|YP_003710214.1|	-	1.6e-28	98.6	0.0	3.2e-28	97.6	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HisKA	PF00512.20	gi|297622077|ref|YP_003710214.1|	-	3e-14	52.7	0.0	6.4e-14	51.6	0.0	1.6	1	0	0	1	1	1	1	His	Kinase	A	(phospho-acceptor)	domain
PAS	PF00989.19	gi|297622077|ref|YP_003710214.1|	-	1.4e-08	34.4	0.0	2.7e-08	33.5	0.0	1.5	1	0	0	1	1	1	1	PAS	fold
HAMP	PF00672.20	gi|297622077|ref|YP_003710214.1|	-	8e-08	32.3	0.1	4e-07	30.1	0.0	2.1	2	0	0	2	2	2	1	HAMP	domain
PAS_4	PF08448.5	gi|297622077|ref|YP_003710214.1|	-	1.3e-06	28.4	0.0	2.5e-06	27.4	0.0	1.5	1	0	0	1	1	1	1	PAS	fold
PAS_8	PF13188.1	gi|297622077|ref|YP_003710214.1|	-	3.6e-06	26.6	0.0	9.6e-06	25.2	0.0	1.7	1	0	0	1	1	1	1	PAS	domain
HATPase_c_3	PF13589.1	gi|297622077|ref|YP_003710214.1|	-	4.3e-06	26.4	0.0	9.8e-06	25.2	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_9	PF13426.1	gi|297622077|ref|YP_003710214.1|	-	1.8e-05	25.0	0.0	4.1e-05	23.9	0.0	1.6	1	0	0	1	1	1	1	PAS	domain
HATPase_c_5	PF14501.1	gi|297622077|ref|YP_003710214.1|	-	0.00032	20.3	0.0	0.00083	19.0	0.0	1.7	1	0	0	1	1	1	1	GHKL	domain
HATPase_c_2	PF13581.1	gi|297622077|ref|YP_003710214.1|	-	0.0052	16.5	0.0	0.011	15.5	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
ASL_C2	PF14698.1	gi|297622077|ref|YP_003710214.1|	-	0.1	12.6	0.0	0.75	9.9	0.0	2.2	2	0	0	2	2	2	0	Argininosuccinate	lyase	C-terminal
AAA_3	PF07726.6	gi|297622078|ref|YP_003710215.1|	-	6e-66	220.0	0.1	1e-65	219.2	0.1	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|297622078|ref|YP_003710215.1|	-	9.1e-13	48.1	0.0	1.8e-12	47.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Sigma54_activat	PF00158.21	gi|297622078|ref|YP_003710215.1|	-	7e-07	28.8	0.0	1.6e-06	27.6	0.0	1.5	1	1	0	1	1	1	1	Sigma-54	interaction	domain
MCM	PF00493.18	gi|297622078|ref|YP_003710215.1|	-	0.0002	20.2	0.0	0.00036	19.4	0.0	1.4	1	0	0	1	1	1	1	MCM2/3/5	family
AAA	PF00004.24	gi|297622078|ref|YP_003710215.1|	-	0.00028	21.0	0.0	0.0011	19.1	0.0	2.1	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|297622078|ref|YP_003710215.1|	-	0.00045	19.3	0.1	0.0045	16.0	0.1	2.5	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Mg_chelatase	PF01078.16	gi|297622078|ref|YP_003710215.1|	-	0.0024	17.0	0.2	0.42	9.7	0.0	2.5	3	0	0	3	3	3	2	Magnesium	chelatase,	subunit	ChlI
DUF58	PF01882.13	gi|297622079|ref|YP_003710216.1|	-	4.6e-21	74.7	0.0	8.9e-21	73.8	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF58
VWA_2	PF13519.1	gi|297622079|ref|YP_003710216.1|	-	2.9e-05	24.2	0.0	4e-05	23.7	0.0	1.4	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
DEAD_assoc	PF08494.6	gi|297622079|ref|YP_003710216.1|	-	0.052	13.2	0.0	0.13	12.0	0.0	1.6	1	0	0	1	1	1	0	DEAD/H	associated
DUF4381	PF14316.1	gi|297622080|ref|YP_003710217.1|	-	0.018	15.1	0.0	0.028	14.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4381)
DDE_Tnp_1_3	PF13612.1	gi|297622082|ref|YP_003710219.1|	-	0.00017	21.3	0.0	0.0002	21.1	0.0	1.1	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1	PF01609.16	gi|297622082|ref|YP_003710219.1|	-	0.0011	18.5	0.0	0.0012	18.4	0.0	1.0	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.1	gi|297622083|ref|YP_003710220.1|	-	2.2e-14	53.4	0.0	3e-14	53.0	0.0	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1	PF01609.16	gi|297622083|ref|YP_003710220.1|	-	3.3e-08	33.3	0.1	7.9e-08	32.0	0.1	1.6	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_4	PF13359.1	gi|297622083|ref|YP_003710220.1|	-	3.4e-05	23.5	0.0	5.2e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
Baculo_PEP_N	PF04512.7	gi|297622083|ref|YP_003710220.1|	-	0.099	12.6	0.0	0.22	11.5	0.0	1.7	1	0	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	N	terminus
DDE_Tnp_1_3	PF13612.1	gi|297622084|ref|YP_003710221.1|	-	0.12	12.1	0.0	0.12	12.0	0.0	1.0	1	0	0	1	1	1	0	Transposase	DDE	domain
Phosphorylase	PF00343.15	gi|297622085|ref|YP_003710222.1|	-	8.9e-30	103.2	0.1	2.5e-22	78.6	0.1	3.1	1	1	2	3	3	3	3	Carbohydrate	phosphorylase
WWE	PF02825.15	gi|297622085|ref|YP_003710222.1|	-	0.14	11.6	1.1	0.63	9.5	0.0	2.5	3	0	0	3	3	3	0	WWE	domain
DUF3416	PF11896.3	gi|297622086|ref|YP_003710223.1|	-	5.6e-48	163.3	0.0	8.3e-48	162.8	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3416)
Alpha-amylase	PF00128.19	gi|297622086|ref|YP_003710223.1|	-	1.9e-09	37.3	0.3	1.2e-08	34.7	0.0	2.4	2	1	0	2	2	2	1	Alpha	amylase,	catalytic	domain
GHL6	PF14871.1	gi|297622086|ref|YP_003710223.1|	-	0.0016	18.4	0.0	0.0041	17.1	0.0	1.6	1	0	0	1	1	1	1	Hypothetical	glycosyl	hydrolase	6
Alpha-amylase	PF00128.19	gi|297622087|ref|YP_003710224.1|	-	1.7e-73	247.7	0.4	2.9e-73	247.0	0.3	1.3	1	0	0	1	1	1	1	Alpha	amylase,	catalytic	domain
APH	PF01636.18	gi|297622087|ref|YP_003710224.1|	-	1e-05	25.3	0.1	3.7e-05	23.5	0.0	2.0	2	1	0	2	2	2	1	Phosphotransferase	enzyme	family
Alpha-amylase_C	PF02806.13	gi|297622087|ref|YP_003710224.1|	-	0.0069	16.4	0.1	0.023	14.8	0.0	1.9	2	0	0	2	2	2	1	Alpha	amylase,	C-terminal	all-beta	domain
DotA	PF11388.3	gi|297622087|ref|YP_003710224.1|	-	0.098	12.7	0.0	0.24	11.4	0.0	1.6	1	0	0	1	1	1	0	Phagosome	trafficking	protein	DotA
Alpha-amylase_C	PF02806.13	gi|297622088|ref|YP_003710225.1|	-	9.4e-21	73.7	0.0	2e-20	72.7	0.0	1.6	1	0	0	1	1	1	1	Alpha	amylase,	C-terminal	all-beta	domain
CBM_48	PF02922.13	gi|297622088|ref|YP_003710225.1|	-	7.5e-18	64.3	0.2	4.2e-17	61.9	0.1	2.2	2	0	0	2	2	2	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Alpha-amylase	PF00128.19	gi|297622088|ref|YP_003710225.1|	-	1.1e-16	61.1	0.0	7.1e-11	42.0	0.0	2.5	1	1	1	2	2	2	2	Alpha	amylase,	catalytic	domain
Glyco_hydro_70	PF02324.11	gi|297622088|ref|YP_003710225.1|	-	0.015	13.1	0.0	0.03	12.1	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	70
Transposase_mut	PF00872.13	gi|297622090|ref|YP_003710227.1|	-	3.3e-05	22.6	0.0	4.1e-05	22.3	0.0	1.1	1	0	0	1	1	1	1	Transposase,	Mutator	family
HTH_Tnp_1	PF01527.15	gi|297622091|ref|YP_003710228.1|	-	1.1e-17	63.7	0.1	1.3e-17	63.4	0.1	1.1	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.1	gi|297622091|ref|YP_003710228.1|	-	2.6e-07	30.4	0.0	3.8e-07	29.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297622091|ref|YP_003710228.1|	-	3.4e-06	26.5	0.0	6e-06	25.7	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_29	PF13551.1	gi|297622091|ref|YP_003710228.1|	-	6.8e-05	22.9	0.0	8.7e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_Tnp_IS630	PF01710.11	gi|297622091|ref|YP_003710228.1|	-	0.00012	21.7	0.3	0.00013	21.5	0.2	1.1	1	0	0	1	1	1	1	Transposase
HTH_psq	PF05225.11	gi|297622091|ref|YP_003710228.1|	-	0.0014	18.1	0.0	0.0025	17.3	0.0	1.4	1	0	0	1	1	1	1	helix-turn-helix,	Psq	domain
DUF1153	PF06627.6	gi|297622091|ref|YP_003710228.1|	-	0.0016	18.2	0.1	0.0028	17.4	0.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1153)
HTH_17	PF12728.2	gi|297622091|ref|YP_003710228.1|	-	0.0019	18.3	0.1	0.0089	16.2	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
rve	PF00665.21	gi|297622092|ref|YP_003710229.1|	-	2.2e-21	76.1	0.1	5.9e-21	74.8	0.0	1.7	2	1	0	2	2	2	1	Integrase	core	domain
HTH_21	PF13276.1	gi|297622092|ref|YP_003710229.1|	-	5.1e-14	52.0	8.7	1.2e-13	50.7	6.0	1.6	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.1	gi|297622092|ref|YP_003710229.1|	-	3e-07	29.8	0.1	8.6e-07	28.4	0.1	1.8	1	0	0	1	1	1	1	Integrase	core	domain
HTH_23	PF13384.1	gi|297622092|ref|YP_003710229.1|	-	0.059	13.0	1.7	0.54	9.9	0.3	2.5	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_32	PF13565.1	gi|297622092|ref|YP_003710229.1|	-	0.18	12.5	5.0	0.12	13.1	0.6	2.3	1	1	1	2	2	2	0	Homeodomain-like	domain
IstB_IS21	PF01695.12	gi|297622093|ref|YP_003710230.1|	-	8.4e-62	207.7	0.3	2.1e-61	206.4	0.0	1.6	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
Bac_DnaA	PF00308.13	gi|297622093|ref|YP_003710230.1|	-	8.5e-08	32.1	0.1	1.3e-07	31.5	0.0	1.2	1	0	0	1	1	1	1	Bacterial	dnaA	protein
PhoH	PF02562.11	gi|297622093|ref|YP_003710230.1|	-	0.00026	20.2	0.1	0.00074	18.7	0.1	1.8	1	1	1	2	2	2	1	PhoH-like	protein
AAA_22	PF13401.1	gi|297622093|ref|YP_003710230.1|	-	0.0017	18.4	0.1	0.36	10.9	0.0	2.5	1	1	1	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|297622093|ref|YP_003710230.1|	-	0.0034	17.5	0.0	0.0071	16.5	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|297622093|ref|YP_003710230.1|	-	0.009	15.4	0.1	0.016	14.6	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297622093|ref|YP_003710230.1|	-	0.012	15.5	1.5	0.042	13.8	0.3	2.4	2	1	0	2	2	2	0	AAA	ATPase	domain
AAA_17	PF13207.1	gi|297622093|ref|YP_003710230.1|	-	0.013	16.2	0.0	0.023	15.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|297622093|ref|YP_003710230.1|	-	0.016	14.3	0.0	0.029	13.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
DUF2281	PF10047.4	gi|297622093|ref|YP_003710230.1|	-	0.026	14.7	0.1	0.06	13.6	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2281)
AAA_33	PF13671.1	gi|297622093|ref|YP_003710230.1|	-	0.047	13.5	0.1	0.19	11.5	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|297622093|ref|YP_003710230.1|	-	0.07	13.4	0.0	0.16	12.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
CbiA	PF01656.18	gi|297622093|ref|YP_003710230.1|	-	0.079	12.3	0.0	0.13	11.6	0.0	1.5	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
KTI12	PF08433.5	gi|297622093|ref|YP_003710230.1|	-	0.1	11.8	0.0	0.18	10.9	0.0	1.5	1	1	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_10	PF12846.2	gi|297622093|ref|YP_003710230.1|	-	0.11	11.8	0.4	0.39	10.1	0.1	2.1	2	1	0	2	2	2	0	AAA-like	domain
AAA_29	PF13555.1	gi|297622093|ref|YP_003710230.1|	-	0.13	11.8	0.1	0.23	10.9	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|297622093|ref|YP_003710230.1|	-	0.14	12.4	0.5	0.34	11.1	0.1	2.1	2	1	0	2	2	2	0	ABC	transporter
rve	PF00665.21	gi|297622094|ref|YP_003710231.1|	-	9.5e-22	77.3	0.0	1.9e-21	76.4	0.0	1.5	1	0	0	1	1	1	1	Integrase	core	domain
HTH_38	PF13936.1	gi|297622094|ref|YP_003710231.1|	-	3e-06	26.6	1.6	4.4e-06	26.1	0.2	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297622094|ref|YP_003710231.1|	-	7.4e-05	22.2	0.1	0.00022	20.7	0.1	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_7	PF02796.10	gi|297622094|ref|YP_003710231.1|	-	0.00036	20.3	1.6	0.0006	19.6	0.1	2.1	2	1	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
HTH_28	PF13518.1	gi|297622094|ref|YP_003710231.1|	-	0.00055	19.8	1.5	0.0033	17.3	0.1	2.4	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_17	PF12728.2	gi|297622094|ref|YP_003710231.1|	-	0.0027	17.9	0.5	0.015	15.5	0.0	2.4	2	0	0	2	2	2	1	Helix-turn-helix	domain
GerE	PF00196.14	gi|297622094|ref|YP_003710231.1|	-	0.0032	16.7	0.0	0.0057	15.9	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
rve_3	PF13683.1	gi|297622094|ref|YP_003710231.1|	-	0.005	16.3	0.0	0.014	14.9	0.0	1.8	1	0	0	1	1	1	1	Integrase	core	domain
HTH_29	PF13551.1	gi|297622094|ref|YP_003710231.1|	-	0.0075	16.4	0.2	0.02	15.0	0.1	1.9	1	1	1	2	2	2	1	Winged	helix-turn	helix
DUF2316	PF10078.4	gi|297622094|ref|YP_003710231.1|	-	0.0088	16.0	0.0	0.018	15.0	0.0	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2316)
HTH_40	PF14493.1	gi|297622094|ref|YP_003710231.1|	-	0.021	15.0	0.0	0.14	12.4	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
YscO	PF07321.7	gi|297622094|ref|YP_003710231.1|	-	0.046	13.5	0.0	0.098	12.4	0.0	1.5	1	0	0	1	1	1	0	Type	III	secretion	protein	YscO
Phage_NinH	PF06322.6	gi|297622094|ref|YP_003710231.1|	-	0.046	13.3	0.1	0.1	12.2	0.0	1.5	1	0	0	1	1	1	0	Phage	NinH	protein
HTH_3	PF01381.17	gi|297622094|ref|YP_003710231.1|	-	0.058	13.2	0.1	0.11	12.3	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix
HTH_30	PF13556.1	gi|297622094|ref|YP_003710231.1|	-	0.08	12.5	0.0	0.16	11.5	0.0	1.5	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
HTH_36	PF13730.1	gi|297622094|ref|YP_003710231.1|	-	0.17	12.0	1.0	1.3	9.2	0.0	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
rve_3	PF13683.1	gi|297622095|ref|YP_003710232.1|	-	1.7e-16	59.4	0.0	3.1e-16	58.6	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
UDG	PF03167.14	gi|297622097|ref|YP_003710234.1|	-	1e-26	93.2	0.1	1.2e-26	92.9	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
DUF4379	PF14311.1	gi|297622099|ref|YP_003710236.1|	-	1.2e-104	342.0	66.2	1.6e-16	59.8	3.8	7.2	7	0	0	7	7	7	7	Domain	of	unknown	function	(DUF4379)
SprT-like	PF10263.4	gi|297622099|ref|YP_003710236.1|	-	0.00052	19.6	1.5	0.00052	19.6	1.0	4.7	4	1	0	4	4	4	1	SprT-like	family
DUF559	PF04480.7	gi|297622099|ref|YP_003710236.1|	-	0.0033	17.0	0.0	0.0076	15.8	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF559)
DNA_primase_lrg	PF04104.9	gi|297622099|ref|YP_003710236.1|	-	0.084	12.1	10.1	0.057	12.6	0.9	3.4	2	1	1	3	3	3	0	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
DUF4379	PF14311.1	gi|297622100|ref|YP_003710237.1|	-	3.6e-165	535.8	120.5	1.3e-18	66.5	5.4	10.5	11	0	0	11	11	11	10	Domain	of	unknown	function	(DUF4379)
DDE_Tnp_1_assoc	PF13808.1	gi|297622102|ref|YP_003710239.1|	-	4.9e-26	90.2	0.2	1.3e-25	88.8	0.0	1.8	2	0	0	2	2	2	1	DDE_Tnp_1-associated
DDE_Tnp_1	PF01609.16	gi|297622102|ref|YP_003710239.1|	-	2.1e-18	66.6	0.0	7.4e-18	64.8	0.0	1.8	1	1	0	1	1	1	1	Transposase	DDE	domain
DEK_C	PF08766.6	gi|297622102|ref|YP_003710239.1|	-	0.083	12.6	0.0	0.15	11.8	0.0	1.4	1	0	0	1	1	1	0	DEK	C	terminal	domain
rve	PF00665.21	gi|297622103|ref|YP_003710240.1|	-	1.9e-19	69.9	0.0	3e-19	69.3	0.0	1.3	1	0	0	1	1	1	1	Integrase	core	domain
HTH_21	PF13276.1	gi|297622103|ref|YP_003710240.1|	-	4.7e-15	55.3	1.3	9.7e-15	54.3	0.9	1.5	1	0	0	1	1	1	1	HTH-like	domain
rve_3	PF13683.1	gi|297622103|ref|YP_003710240.1|	-	1.7e-13	49.8	0.3	3.7e-13	48.7	0.2	1.6	1	0	0	1	1	1	1	Integrase	core	domain
rve_2	PF13333.1	gi|297622103|ref|YP_003710240.1|	-	0.00012	22.0	2.9	0.00024	21.0	2.0	1.6	1	0	0	1	1	1	1	Integrase	core	domain
HpaB_N	PF11794.3	gi|297622103|ref|YP_003710240.1|	-	0.034	13.5	0.4	4.9	6.4	0.0	2.2	2	0	0	2	2	2	0	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HTH_32	PF13565.1	gi|297622103|ref|YP_003710240.1|	-	0.064	14.0	0.3	0.064	14.0	0.2	2.8	3	1	0	3	3	3	0	Homeodomain-like	domain
HTH_Tnp_1	PF01527.15	gi|297622104|ref|YP_003710241.1|	-	3.5e-11	42.8	0.4	4.5e-11	42.5	0.3	1.2	1	0	0	1	1	1	1	Transposase
HTH_28	PF13518.1	gi|297622104|ref|YP_003710241.1|	-	1.1e-05	25.3	0.0	1.6e-05	24.7	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297622104|ref|YP_003710241.1|	-	0.00018	21.0	0.0	0.00027	20.4	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
RepB-RCR_reg	PF10723.4	gi|297622104|ref|YP_003710241.1|	-	0.012	15.3	0.1	0.14	11.9	0.0	2.0	2	0	0	2	2	2	0	Replication	regulatory	protein	RepB
HTH_29	PF13551.1	gi|297622104|ref|YP_003710241.1|	-	0.032	14.3	0.0	0.037	14.1	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
MTBP_C	PF14920.1	gi|297622104|ref|YP_003710241.1|	-	0.095	12.1	0.1	0.1	12.0	0.0	1.1	1	0	0	1	1	1	0	MDM2-binding
DivIC	PF04977.10	gi|297622104|ref|YP_003710241.1|	-	0.27	10.7	1.9	0.36	10.3	1.3	1.2	1	0	0	1	1	1	0	Septum	formation	initiator
DUF4096	PF13340.1	gi|297622105|ref|YP_003710242.1|	-	1.1e-29	102.0	0.9	1.5e-29	101.6	0.6	1.2	1	0	0	1	1	1	1	Putative	transposase	of	IS4/5	family	(DUF4096)
HTH_38	PF13936.1	gi|297622106|ref|YP_003710243.1|	-	4.6e-07	29.2	2.1	8.5e-07	28.4	0.2	2.2	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297622106|ref|YP_003710243.1|	-	1.7e-05	24.2	0.1	4.1e-05	23.0	0.1	1.6	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_7	PF02796.10	gi|297622106|ref|YP_003710243.1|	-	4.1e-05	23.3	2.4	0.00012	21.8	0.1	2.5	2	1	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
HTH_28	PF13518.1	gi|297622106|ref|YP_003710243.1|	-	4.9e-05	23.2	1.5	0.00073	19.4	0.1	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_17	PF12728.2	gi|297622106|ref|YP_003710243.1|	-	0.00046	20.3	0.7	0.0028	17.8	0.5	2.3	1	1	0	1	1	1	1	Helix-turn-helix	domain
GerE	PF00196.14	gi|297622106|ref|YP_003710243.1|	-	0.0007	18.8	0.0	0.0012	18.1	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
DUF2316	PF10078.4	gi|297622106|ref|YP_003710243.1|	-	0.0011	18.9	0.0	0.0017	18.3	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2316)
HTH_29	PF13551.1	gi|297622106|ref|YP_003710243.1|	-	0.0014	18.7	0.2	0.0026	17.8	0.1	1.7	1	1	0	1	1	1	1	Winged	helix-turn	helix
HTH_3	PF01381.17	gi|297622106|ref|YP_003710243.1|	-	0.011	15.5	0.1	0.021	14.6	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix
Phage_NinH	PF06322.6	gi|297622106|ref|YP_003710243.1|	-	0.011	15.3	0.0	0.021	14.4	0.0	1.4	1	0	0	1	1	1	0	Phage	NinH	protein
HTH_40	PF14493.1	gi|297622106|ref|YP_003710243.1|	-	0.011	15.8	0.0	0.02	15.1	0.0	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_30	PF13556.1	gi|297622106|ref|YP_003710243.1|	-	0.017	14.7	0.1	0.037	13.6	0.0	1.6	2	0	0	2	2	2	0	PucR	C-terminal	helix-turn-helix	domain
HTH_11	PF08279.7	gi|297622106|ref|YP_003710243.1|	-	0.042	13.4	0.4	0.16	11.6	0.1	2.1	2	1	0	2	2	2	0	HTH	domain
Terminase_5	PF06056.7	gi|297622106|ref|YP_003710243.1|	-	0.071	12.6	0.2	0.14	11.7	0.0	1.6	2	0	0	2	2	1	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_Tnp_Tc3_1	PF11427.3	gi|297622106|ref|YP_003710243.1|	-	0.085	12.5	0.3	0.14	11.8	0.2	1.3	1	0	0	1	1	1	0	Tc3	transposase
HTH_Tnp_Tc3_2	PF01498.13	gi|297622106|ref|YP_003710243.1|	-	0.11	12.5	0.3	0.56	10.3	0.3	2.1	1	1	0	2	2	2	0	Transposase
HTH_19	PF12844.2	gi|297622106|ref|YP_003710243.1|	-	0.11	12.5	0.1	0.22	11.5	0.1	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_22	PF13309.1	gi|297622106|ref|YP_003710243.1|	-	0.12	12.1	0.0	0.23	11.2	0.0	1.5	1	0	0	1	1	1	0	HTH	domain
HTH_36	PF13730.1	gi|297622106|ref|YP_003710243.1|	-	0.13	12.3	0.0	0.29	11.2	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
TrmB	PF01978.14	gi|297622106|ref|YP_003710243.1|	-	0.14	11.8	0.1	0.43	10.3	0.0	1.7	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
DUF1722	PF08349.6	gi|297622107|ref|YP_003710244.1|	-	0.027	14.3	0.0	0.21	11.4	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1722)
APH	PF01636.18	gi|297622107|ref|YP_003710244.1|	-	0.054	13.2	0.0	0.092	12.4	0.0	1.3	1	0	0	1	1	1	0	Phosphotransferase	enzyme	family
RIO1	PF01163.17	gi|297622107|ref|YP_003710244.1|	-	0.071	12.4	0.1	0.1	11.9	0.0	1.2	1	0	0	1	1	1	0	RIO1	family
Transposase_mut	PF00872.13	gi|297622108|ref|YP_003710245.1|	-	1.4e-101	339.7	0.0	1.7e-101	339.5	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.4	gi|297622108|ref|YP_003710245.1|	-	1.3e-10	41.3	0.0	4.1e-10	39.6	0.0	1.9	2	0	0	2	2	2	1	MULE	transposase	domain
DDE_Tnp_IS240	PF13610.1	gi|297622108|ref|YP_003710245.1|	-	0.0091	15.9	0.3	0.11	12.5	0.1	2.6	2	1	1	3	3	3	1	DDE	domain
Alpha-amylase	PF00128.19	gi|297622110|ref|YP_003710247.1|	-	5.4e-24	85.1	0.0	1.9e-21	76.7	0.0	2.3	1	1	0	1	1	1	1	Alpha	amylase,	catalytic	domain
CBM_48	PF02922.13	gi|297622110|ref|YP_003710247.1|	-	1.3e-14	53.9	0.4	9e-14	51.2	0.0	2.3	2	1	0	2	2	2	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Glyco_hydro_31	PF01055.21	gi|297622110|ref|YP_003710247.1|	-	0.0022	16.8	0.2	0.014	14.2	0.0	2.0	2	0	0	2	2	2	1	Glycosyl	hydrolases	family	31
Apis_Csd	PF11671.3	gi|297622111|ref|YP_003710248.1|	-	0.032	14.0	1.7	0.054	13.3	1.2	1.4	1	0	0	1	1	1	0	Complementary	sex	determiner	protein
DUF1494	PF07379.6	gi|297622112|ref|YP_003710249.1|	-	1.2e-07	31.8	0.3	2.3e-05	24.3	0.2	2.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1494)
T2SJ	PF11612.3	gi|297622112|ref|YP_003710249.1|	-	0.00076	19.2	0.0	0.001	18.8	0.0	1.2	1	0	0	1	1	1	1	Type	II	secretion	system	(T2SS),	protein	J
N_methyl_3	PF13633.1	gi|297622112|ref|YP_003710249.1|	-	4.7	7.3	7.1	13	5.9	4.9	1.7	1	0	0	1	1	1	0	Prokaryotic	N-terminal	methylation	site
DUF898	PF05987.8	gi|297622113|ref|YP_003710250.1|	-	0.047	12.5	0.0	0.047	12.5	0.0	1.1	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF898)
N_methyl_2	PF13544.1	gi|297622113|ref|YP_003710250.1|	-	0.13	11.8	1.2	0.21	11.1	0.8	1.4	1	0	0	1	1	1	0	Type	IV	pilin	N-term	methylation	site	GFxxxE
N_methyl_3	PF13633.1	gi|297622113|ref|YP_003710250.1|	-	1.8	8.6	8.9	3.4	7.7	6.2	1.4	1	0	0	1	1	1	0	Prokaryotic	N-terminal	methylation	site
N_methyl	PF07963.7	gi|297622114|ref|YP_003710251.1|	-	0.092	12.5	5.0	0.18	11.6	3.5	1.5	1	0	0	1	1	1	0	Prokaryotic	N-terminal	methylation	motif
N_methyl_2	PF13544.1	gi|297622114|ref|YP_003710251.1|	-	1.5	8.3	7.1	3.4	7.3	4.9	1.6	1	0	0	1	1	1	0	Type	IV	pilin	N-term	methylation	site	GFxxxE
N_methyl	PF07963.7	gi|297622115|ref|YP_003710252.1|	-	0.0051	16.4	7.2	0.009	15.6	5.0	1.4	1	0	0	1	1	1	1	Prokaryotic	N-terminal	methylation	motif
N_methyl_3	PF13633.1	gi|297622115|ref|YP_003710252.1|	-	0.13	12.2	9.4	0.22	11.4	6.5	1.4	1	0	0	1	1	1	0	Prokaryotic	N-terminal	methylation	site
N_methyl_2	PF13544.1	gi|297622115|ref|YP_003710252.1|	-	0.81	9.2	8.2	1.4	8.4	5.7	1.4	1	0	0	1	1	1	0	Type	IV	pilin	N-term	methylation	site	GFxxxE
Pkinase	PF00069.20	gi|297622116|ref|YP_003710253.1|	-	8.6e-15	54.5	0.0	1.3e-14	53.9	0.0	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
FhuF	PF06276.7	gi|297622116|ref|YP_003710253.1|	-	0.0097	15.8	0.0	0.016	15.1	0.0	1.4	1	0	0	1	1	1	1	Ferric	iron	reductase	FhuF-like	transporter
APH	PF01636.18	gi|297622117|ref|YP_003710254.1|	-	2.1e-07	30.9	0.0	4.2e-07	29.9	0.0	1.4	2	0	0	2	2	2	1	Phosphotransferase	enzyme	family
T2SF	PF00482.18	gi|297622118|ref|YP_003710255.1|	-	3.4e-55	185.2	7.6	4.1e-29	101.0	0.3	2.2	2	0	0	2	2	2	2	Type	II	secretion	system	(T2SS),	protein	F
CobU	PF02283.11	gi|297622118|ref|YP_003710255.1|	-	0.038	13.3	0.1	0.068	12.5	0.1	1.4	1	0	0	1	1	1	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
T2SE	PF00437.15	gi|297622119|ref|YP_003710256.1|	-	4.1e-80	268.5	0.9	5.4e-80	268.1	0.6	1.1	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
T2SE_Nter	PF05157.10	gi|297622119|ref|YP_003710256.1|	-	9.3e-18	64.2	0.0	3e-17	62.6	0.0	1.8	2	0	0	2	2	2	1	Type	II	secretion	system	(T2SS),	protein	E,	N-terminal	domain
AAA_19	PF13245.1	gi|297622119|ref|YP_003710256.1|	-	1.4e-05	24.7	0.0	3.8e-05	23.3	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_14	PF13173.1	gi|297622119|ref|YP_003710256.1|	-	0.00072	19.4	0.0	0.002	18.0	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|297622119|ref|YP_003710256.1|	-	0.0025	17.9	0.0	0.0051	16.9	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|297622119|ref|YP_003710256.1|	-	0.0028	17.3	0.0	0.0054	16.4	0.0	1.4	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_23	PF13476.1	gi|297622119|ref|YP_003710256.1|	-	0.0033	17.7	0.1	0.0065	16.8	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|297622119|ref|YP_003710256.1|	-	0.006	16.0	0.0	0.013	14.9	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|297622119|ref|YP_003710256.1|	-	0.015	15.2	0.0	0.044	13.7	0.0	1.8	2	0	0	2	2	2	0	AAA	ATPase	domain
Zeta_toxin	PF06414.7	gi|297622119|ref|YP_003710256.1|	-	0.018	14.1	0.1	0.32	10.0	0.0	2.2	2	0	0	2	2	2	0	Zeta	toxin
Arch_ATPase	PF01637.13	gi|297622119|ref|YP_003710256.1|	-	0.026	14.2	0.0	0.05	13.2	0.0	1.4	1	0	0	1	1	1	0	Archaeal	ATPase
zinc_ribbon_5	PF13719.1	gi|297622119|ref|YP_003710256.1|	-	0.03	13.9	0.1	0.16	11.6	0.0	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
NTPase_1	PF03266.10	gi|297622119|ref|YP_003710256.1|	-	0.039	13.6	0.3	0.24	11.1	0.1	2.1	2	0	0	2	2	2	0	NTPase
FtsK_SpoIIIE	PF01580.13	gi|297622119|ref|YP_003710256.1|	-	0.04	13.3	0.0	0.49	9.8	0.0	2.2	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
ResIII	PF04851.10	gi|297622119|ref|YP_003710256.1|	-	0.052	13.3	0.0	0.091	12.5	0.0	1.3	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA	PF00004.24	gi|297622119|ref|YP_003710256.1|	-	0.052	13.7	0.0	0.12	12.6	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
zinc_ribbon_4	PF13717.1	gi|297622119|ref|YP_003710256.1|	-	0.067	12.8	0.1	0.42	10.3	0.0	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
AAA_10	PF12846.2	gi|297622119|ref|YP_003710256.1|	-	0.069	12.5	0.1	0.18	11.2	0.0	1.7	2	0	0	2	2	2	0	AAA-like	domain
AAA_30	PF13604.1	gi|297622119|ref|YP_003710256.1|	-	0.076	12.5	0.0	0.18	11.3	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|297622119|ref|YP_003710256.1|	-	0.09	13.6	0.0	0.28	12.0	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
AAA_11	PF13086.1	gi|297622119|ref|YP_003710256.1|	-	0.095	12.2	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
DEAD	PF00270.24	gi|297622119|ref|YP_003710256.1|	-	0.1	12.0	0.1	0.4	10.1	0.0	1.7	1	1	1	2	2	2	0	DEAD/DEAH	box	helicase
ABC_tran	PF00005.22	gi|297622119|ref|YP_003710256.1|	-	0.12	12.6	0.0	0.26	11.5	0.0	1.5	1	0	0	1	1	1	0	ABC	transporter
Arena_RNA_pol	PF06317.6	gi|297622119|ref|YP_003710256.1|	-	0.25	7.9	0.0	0.32	7.5	0.0	1.0	1	0	0	1	1	1	0	Arenavirus	RNA	polymerase
Secretin	PF00263.16	gi|297622120|ref|YP_003710257.1|	-	7e-35	119.8	2.6	1.4e-34	118.8	1.8	1.5	1	0	0	1	1	1	1	Bacterial	type	II	and	III	secretion	system	protein
Secretin_N	PF03958.12	gi|297622120|ref|YP_003710257.1|	-	1.8e-14	53.7	0.4	1.6e-07	31.4	0.0	3.1	2	0	0	2	2	2	2	Bacterial	type	II/III	secretion	system	short	domain
DUF3294	PF07957.6	gi|297622120|ref|YP_003710257.1|	-	0.011	15.2	0.3	0.03	13.8	0.2	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3294)
H-kinase_dim	PF02895.9	gi|297622120|ref|YP_003710257.1|	-	2.3	8.6	5.5	9	6.7	0.5	2.7	2	0	0	2	2	2	0	Signal	transducing	histidine	kinase,	homodimeric	domain
LIN37	PF15306.1	gi|297622121|ref|YP_003710258.1|	-	0.062	13.2	0.2	0.16	11.9	0.2	1.6	1	0	0	1	1	1	0	LIN37
bPH_5	PF10882.3	gi|297622121|ref|YP_003710258.1|	-	0.077	12.7	0.3	2.4	8.0	0.0	3.0	3	0	0	3	3	3	0	Bacterial	PH	domain
DUF95	PF01944.12	gi|297622122|ref|YP_003710259.1|	-	0.0005	19.7	3.7	0.0011	18.6	0.2	2.1	1	1	1	2	2	2	2	Integral	membrane	protein	DUF95
DUF2105	PF09878.4	gi|297622122|ref|YP_003710259.1|	-	0.0013	18.3	0.7	0.0015	18.1	0.5	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2105)
NQR2_RnfD_RnfE	PF03116.10	gi|297622122|ref|YP_003710259.1|	-	0.029	13.5	0.2	0.035	13.3	0.2	1.2	1	0	0	1	1	1	0	NQR2,	RnfD,	RnfE	family
PRA1	PF03208.14	gi|297622122|ref|YP_003710259.1|	-	0.053	12.8	0.3	0.077	12.3	0.2	1.3	1	0	0	1	1	1	0	PRA1	family	protein
DUF2207	PF09972.4	gi|297622122|ref|YP_003710259.1|	-	0.11	11.1	1.4	0.14	10.6	1.0	1.3	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Yip1	PF04893.12	gi|297622122|ref|YP_003710259.1|	-	0.14	11.6	4.4	0.29	10.6	3.0	1.5	1	1	0	1	1	1	0	Yip1	domain
DUF106	PF01956.11	gi|297622122|ref|YP_003710259.1|	-	0.14	11.6	0.1	0.14	11.6	0.0	1.4	2	0	0	2	2	2	0	Integral	membrane	protein	DUF106
UPF0154	PF03672.8	gi|297622122|ref|YP_003710259.1|	-	0.19	11.4	0.0	0.19	11.4	0.0	2.5	4	0	0	4	4	4	0	Uncharacterised	protein	family	(UPF0154)
NQRA	PF05896.6	gi|297622124|ref|YP_003710261.1|	-	4.2e-80	268.6	0.1	5.4e-80	268.2	0.1	1.1	1	0	0	1	1	1	1	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
NQRA_SLBB	PF11973.3	gi|297622124|ref|YP_003710261.1|	-	4.1e-12	46.2	0.1	7.8e-12	45.3	0.1	1.5	1	0	0	1	1	1	1	NQRA	C-terminal	domain
RnfC_N	PF13375.1	gi|297622124|ref|YP_003710261.1|	-	0.00066	19.3	0.0	0.0016	18.0	0.0	1.7	1	0	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
Biotin_lipoyl_2	PF13533.1	gi|297622124|ref|YP_003710261.1|	-	0.026	14.1	0.5	3.1	7.5	0.0	2.9	3	0	0	3	3	3	0	Biotin-lipoyl	like
MS_channel	PF00924.13	gi|297622125|ref|YP_003710262.1|	-	5.9e-54	182.5	2.1	5.9e-54	182.5	1.5	2.0	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
DUF2608	PF11019.3	gi|297622126|ref|YP_003710263.1|	-	2.9e-46	157.5	0.0	3.3e-46	157.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2608)
HAD_2	PF13419.1	gi|297622126|ref|YP_003710263.1|	-	3.8e-05	23.9	0.1	0.1	12.8	0.0	3.1	1	1	1	2	2	2	2	Haloacid	dehalogenase-like	hydrolase
Acid_phosphat_B	PF03767.9	gi|297622126|ref|YP_003710263.1|	-	0.00018	20.9	0.0	0.00054	19.4	0.0	1.7	1	1	0	1	1	1	1	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
LNS2	PF08235.8	gi|297622126|ref|YP_003710263.1|	-	0.01	15.4	0.0	0.019	14.5	0.0	1.5	1	0	0	1	1	1	0	LNS2	(Lipin/Ned1/Smp2)
Hydrolase	PF00702.21	gi|297622126|ref|YP_003710263.1|	-	0.017	15.5	0.0	5	7.4	0.0	2.1	1	1	1	2	2	2	0	haloacid	dehalogenase-like	hydrolase
RasGEF_N_2	PF14663.1	gi|297622126|ref|YP_003710263.1|	-	0.035	14.0	0.2	0.17	11.8	0.0	2.0	1	1	1	2	2	2	0	Rapamycin-insensitive	companion	of	mTOR	RasGEF_N	domain
NIF	PF03031.13	gi|297622126|ref|YP_003710263.1|	-	0.12	12.0	0.0	0.24	11.0	0.0	1.5	1	1	0	1	1	1	0	NLI	interacting	factor-like	phosphatase
GDPD	PF03009.12	gi|297622127|ref|YP_003710264.1|	-	8.7e-40	136.8	0.0	2.3e-39	135.4	0.0	1.7	1	1	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
GDPD_2	PF13653.1	gi|297622127|ref|YP_003710264.1|	-	4.6e-05	23.4	0.4	0.00014	21.9	0.3	1.7	2	0	0	2	2	2	1	Glycerophosphoryl	diester	phosphodiesterase	family
Aldedh	PF00171.17	gi|297622129|ref|YP_003710266.1|	-	2.4e-135	451.4	0.0	2.7e-135	451.2	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
PhzC-PhzF	PF02567.11	gi|297622131|ref|YP_003710268.1|	-	6.1e-44	150.3	0.0	8e-44	149.9	0.0	1.1	1	0	0	1	1	1	1	Phenazine	biosynthesis-like	protein
Pro_racemase	PF05544.6	gi|297622131|ref|YP_003710268.1|	-	0.00028	19.8	0.0	0.0004	19.3	0.0	1.1	1	0	0	1	1	1	1	Proline	racemase
DAP_epimerase	PF01678.14	gi|297622131|ref|YP_003710268.1|	-	0.00053	19.8	0.0	0.00098	19.0	0.0	1.4	1	0	0	1	1	1	1	Diaminopimelate	epimerase
Glyco_hydro_10	PF00331.15	gi|297622132|ref|YP_003710269.1|	-	0.071	12.1	0.3	0.082	11.9	0.2	1.0	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	10
Conotoxin	PF02950.12	gi|297622132|ref|YP_003710269.1|	-	1.4	9.7	7.6	49	4.8	5.3	2.1	1	1	0	1	1	1	0	Conotoxin
Transketolase_N	PF00456.16	gi|297622132|ref|YP_003710269.1|	-	5.3	5.7	5.4	5.7	5.6	3.7	1.0	1	0	0	1	1	1	0	Transketolase,	thiamine	diphosphate	binding	domain
Peptidase_S8	PF00082.17	gi|297622134|ref|YP_003710271.1|	-	5.2e-50	170.1	4.5	7e-50	169.7	3.1	1.1	1	0	0	1	1	1	1	Subtilase	family
Inhibitor_I9	PF05922.11	gi|297622134|ref|YP_003710271.1|	-	8.2e-05	23.1	0.1	0.00019	21.9	0.0	1.7	1	0	0	1	1	1	1	Peptidase	inhibitor	I9
PBP_dimer	PF03717.10	gi|297622136|ref|YP_003710273.1|	-	6.4e-37	127.3	3.2	4.5e-36	124.5	2.2	2.3	1	1	0	1	1	1	1	Penicillin-binding	Protein	dimerisation	domain
Transpeptidase	PF00905.17	gi|297622136|ref|YP_003710273.1|	-	3.2e-29	101.9	0.0	1.8e-24	86.2	0.0	3.1	2	1	0	2	2	2	2	Penicillin	binding	protein	transpeptidase	domain
Ribosomal_S2	PF00318.15	gi|297622137|ref|YP_003710274.1|	-	1.6e-81	272.5	0.1	1.9e-81	272.3	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S2
SRPRB	PF09439.5	gi|297622137|ref|YP_003710274.1|	-	0.013	14.7	1.3	0.055	12.6	0.5	2.1	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
Baculo_p47	PF05112.7	gi|297622137|ref|YP_003710274.1|	-	0.11	11.8	0.2	0.18	11.1	0.1	1.3	1	0	0	1	1	1	0	Baculovirus	P47	protein
EF_TS	PF00889.14	gi|297622138|ref|YP_003710275.1|	-	9.6e-67	224.5	4.2	1.2e-66	224.2	2.9	1.1	1	0	0	1	1	1	1	Elongation	factor	TS
UBA	PF00627.26	gi|297622138|ref|YP_003710275.1|	-	1.6e-08	34.1	0.0	3.2e-08	33.1	0.0	1.6	1	0	0	1	1	1	1	UBA/TS-N	domain
UBA_4	PF14555.1	gi|297622138|ref|YP_003710275.1|	-	0.012	15.1	0.1	0.04	13.4	0.0	1.9	2	0	0	2	2	2	0	UBA-like	domain
GerA	PF03323.8	gi|297622138|ref|YP_003710275.1|	-	0.028	12.5	0.5	0.24	9.4	0.0	2.0	2	0	0	2	2	2	0	Bacillus/Clostridium	GerA	spore	germination	protein
CUE	PF02845.11	gi|297622138|ref|YP_003710275.1|	-	0.056	12.9	0.0	0.96	9.0	0.1	2.3	2	0	0	2	2	2	0	CUE	domain
Nop16	PF09420.5	gi|297622138|ref|YP_003710275.1|	-	0.085	12.9	2.1	2.8	8.0	1.4	2.2	1	1	0	1	1	1	0	Ribosome	biogenesis	protein	Nop16
AA_kinase	PF00696.23	gi|297622139|ref|YP_003710276.1|	-	3.3e-25	89.0	0.2	5.1e-25	88.4	0.1	1.3	1	0	0	1	1	1	1	Amino	acid	kinase	family
WSN	PF02206.13	gi|297622139|ref|YP_003710276.1|	-	0.013	15.1	0.1	0.039	13.7	0.1	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function
B12-binding	PF02310.14	gi|297622139|ref|YP_003710276.1|	-	0.027	14.3	0.1	0.22	11.3	0.0	2.1	1	1	1	2	2	2	0	B12	binding	domain
RRF	PF01765.14	gi|297622140|ref|YP_003710277.1|	-	6.1e-56	188.4	5.8	7.3e-56	188.1	4.0	1.1	1	0	0	1	1	1	1	Ribosome	recycling	factor
DUF2762	PF10960.3	gi|297622140|ref|YP_003710277.1|	-	0.083	12.6	6.1	1.2	8.8	1.2	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2762)
UVR	PF02151.14	gi|297622141|ref|YP_003710278.1|	-	6.7e-06	25.4	5.1	1.2e-05	24.6	3.5	1.4	1	0	0	1	1	1	1	UvrB/uvrC	motif
zf-CHY	PF05495.7	gi|297622141|ref|YP_003710278.1|	-	0.057	13.5	6.5	0.093	12.8	1.8	2.2	1	1	1	2	2	2	0	CHY	zinc	finger
DZR	PF12773.2	gi|297622141|ref|YP_003710278.1|	-	0.084	12.7	7.3	0.64	9.8	0.2	2.4	2	0	0	2	2	2	0	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.7	gi|297622141|ref|YP_003710278.1|	-	2.2	7.6	7.0	1.1	8.6	0.3	3.1	2	1	1	3	3	3	0	TFIIB	zinc-binding
DNA_RNApol_7kD	PF03604.8	gi|297622141|ref|YP_003710278.1|	-	3.3	7.2	10.5	0.39	10.2	1.0	2.6	2	1	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF2318	PF10080.4	gi|297622141|ref|YP_003710278.1|	-	4	7.2	9.3	6	6.7	2.4	2.3	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2318)
LIM	PF00412.17	gi|297622141|ref|YP_003710278.1|	-	6.3	6.9	7.1	27	4.9	1.1	2.6	2	1	0	2	2	2	0	LIM	domain
Zn_ribbon_recom	PF13408.1	gi|297622141|ref|YP_003710278.1|	-	9.2	6.6	9.7	20	5.5	0.9	2.7	2	1	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
XPA_N	PF01286.13	gi|297622141|ref|YP_003710278.1|	-	9.3	6.0	8.0	5	6.8	0.2	3.1	3	0	0	3	3	3	0	XPA	protein	N-terminal
ATP-gua_Ptrans	PF00217.14	gi|297622142|ref|YP_003710279.1|	-	3.2e-38	131.4	0.1	4.1e-38	131.0	0.1	1.1	1	0	0	1	1	1	1	ATP:guanido	phosphotransferase,	C-terminal	catalytic	domain
Peptidase_S15	PF02129.13	gi|297622143|ref|YP_003710280.1|	-	5.9e-45	153.7	1.3	3.4e-31	108.6	0.1	2.3	1	1	1	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
PepX_C	PF08530.5	gi|297622143|ref|YP_003710280.1|	-	1.1e-39	136.6	0.0	1.4e-39	136.2	0.0	1.2	1	0	0	1	1	1	1	X-Pro	dipeptidyl-peptidase	C-terminal	non-catalytic	domain
Ribosomal_S20p	PF01649.13	gi|297622145|ref|YP_003710282.1|	-	1.2e-19	70.4	7.8	1.2e-19	70.4	5.4	1.5	1	1	1	2	2	2	1	Ribosomal	protein	S20
GPW_gp25	PF04965.9	gi|297622145|ref|YP_003710282.1|	-	0.15	11.6	0.5	0.24	10.9	0.3	1.4	1	1	0	1	1	1	0	Gene	25-like	lysozyme
PseudoU_synth_2	PF00849.17	gi|297622146|ref|YP_003710283.1|	-	3.6e-28	98.4	0.5	5.1e-28	97.9	0.4	1.2	1	0	0	1	1	1	1	RNA	pseudouridylate	synthase
SH3_2	PF07653.12	gi|297622146|ref|YP_003710283.1|	-	0.12	11.8	0.1	0.31	10.5	0.0	1.6	1	0	0	1	1	1	0	Variant	SH3	domain
Tower	PF09121.5	gi|297622147|ref|YP_003710284.1|	-	0.029	14.3	1.0	0.056	13.3	0.7	1.4	1	0	0	1	1	1	0	Tower
DUF1467	PF07330.7	gi|297622147|ref|YP_003710284.1|	-	0.043	13.5	0.4	5.6	6.8	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1467)
DUF3592	PF12158.3	gi|297622147|ref|YP_003710284.1|	-	0.046	13.5	0.3	0.059	13.1	0.2	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3592)
DUF3139	PF11337.3	gi|297622147|ref|YP_003710284.1|	-	0.14	12.4	1.1	0.4	10.9	0.0	2.2	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3139)
UPF0242	PF06785.6	gi|297622149|ref|YP_003710286.1|	-	1.6e-23	83.0	13.5	1.6e-23	83.0	9.4	2.1	2	1	0	2	2	2	1	Uncharacterised	protein	family	(UPF0242)
PAS_9	PF13426.1	gi|297622149|ref|YP_003710286.1|	-	0.0027	18.0	1.1	0.0059	16.9	0.0	2.1	2	1	0	2	2	2	1	PAS	domain
Fib_alpha	PF08702.5	gi|297622149|ref|YP_003710286.1|	-	0.0029	17.7	13.6	0.0056	16.7	9.4	1.5	1	0	0	1	1	1	1	Fibrinogen	alpha/beta	chain	family
AAA_13	PF13166.1	gi|297622149|ref|YP_003710286.1|	-	0.0058	15.1	15.0	0.0079	14.7	10.4	1.1	1	0	0	1	1	1	1	AAA	domain
HOOK	PF05622.7	gi|297622149|ref|YP_003710286.1|	-	0.065	11.0	19.4	0.093	10.5	13.5	1.1	1	0	0	1	1	1	0	HOOK	protein
IncA	PF04156.9	gi|297622149|ref|YP_003710286.1|	-	0.082	12.5	26.4	0.89	9.1	18.3	2.1	1	1	0	1	1	1	0	IncA	protein
bZIP_1	PF00170.16	gi|297622149|ref|YP_003710286.1|	-	0.12	12.3	16.1	1.4	8.9	3.6	2.6	2	0	0	2	2	2	0	bZIP	transcription	factor
PspA_IM30	PF04012.7	gi|297622149|ref|YP_003710286.1|	-	0.25	10.6	20.5	0.4	10.0	14.2	1.2	1	0	0	1	1	1	0	PspA/IM30	family
Exonuc_VII_L	PF02601.10	gi|297622149|ref|YP_003710286.1|	-	0.27	10.3	8.1	0.33	10.1	5.6	1.3	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
ATG16	PF08614.6	gi|297622149|ref|YP_003710286.1|	-	0.37	10.5	23.5	1.1	9.0	5.7	2.3	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
Reo_sigmaC	PF04582.7	gi|297622149|ref|YP_003710286.1|	-	0.47	9.5	2.5	0.71	9.0	1.7	1.2	1	0	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
AbiH	PF14253.1	gi|297622149|ref|YP_003710286.1|	-	0.54	9.7	11.7	0.23	10.9	6.2	1.7	2	0	0	2	2	2	0	Bacteriophage	abortive	infection	AbiH
Cortex-I_coil	PF09304.5	gi|297622149|ref|YP_003710286.1|	-	0.86	9.6	22.3	0.26	11.3	7.1	2.4	1	1	1	2	2	2	0	Cortexillin	I,	coiled	coil
Laminin_II	PF06009.7	gi|297622149|ref|YP_003710286.1|	-	0.92	9.2	15.6	0.98	9.1	4.8	2.3	1	1	1	2	2	2	0	Laminin	Domain	II
Spc7	PF08317.6	gi|297622149|ref|YP_003710286.1|	-	0.92	8.1	24.9	1.4	7.5	17.3	1.2	1	0	0	1	1	1	0	Spc7	kinetochore	protein
Z1	PF10593.4	gi|297622149|ref|YP_003710286.1|	-	1	8.5	8.2	2.1	7.4	5.7	1.5	1	0	0	1	1	1	0	Z1	domain
DUF3584	PF12128.3	gi|297622149|ref|YP_003710286.1|	-	1.1	6.4	20.8	1.5	6.0	14.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
FliD_N	PF02465.13	gi|297622149|ref|YP_003710286.1|	-	1.7	9.0	10.2	0.074	13.4	1.2	2.5	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
Atg14	PF10186.4	gi|297622149|ref|YP_003710286.1|	-	3.7	6.4	20.0	6	5.7	13.9	1.3	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
FlaC_arch	PF05377.6	gi|297622149|ref|YP_003710286.1|	-	6.5	6.7	10.1	1.4	8.9	1.7	2.7	2	1	1	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
DUF3552	PF12072.3	gi|297622149|ref|YP_003710286.1|	-	9.3	5.4	26.1	17	4.5	18.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3552)
CoiA	PF06054.6	gi|297622150|ref|YP_003710287.1|	-	1.3e-21	76.9	0.3	1.5e-21	76.7	0.2	1.2	1	1	0	1	1	1	1	Competence	protein	CoiA-like	family
Sigma70_r3	PF04539.11	gi|297622151|ref|YP_003710288.1|	-	1.1e-24	86.1	4.5	2e-24	85.2	0.1	2.9	3	0	0	3	3	3	1	Sigma-70	region	3
Sigma70_r4	PF04545.11	gi|297622151|ref|YP_003710288.1|	-	1.6e-23	81.7	3.7	8.4e-19	66.6	0.7	3.1	2	0	0	2	2	2	2	Sigma-70,	region	4
Sigma70_r2	PF04542.9	gi|297622151|ref|YP_003710288.1|	-	2.5e-23	81.4	0.2	7.4e-23	79.9	0.1	1.9	1	0	0	1	1	1	1	Sigma-70	region	2
Sigma70_r1_2	PF00140.15	gi|297622151|ref|YP_003710288.1|	-	6.7e-17	60.8	0.4	6.7e-17	60.8	0.3	2.1	2	0	0	2	2	2	1	Sigma-70	factor,	region	1.2
Sigma70_r1_1	PF03979.9	gi|297622151|ref|YP_003710288.1|	-	2.2e-16	59.5	4.7	7.5e-16	57.8	3.3	1.9	1	0	0	1	1	1	1	Sigma-70	factor,	region	1.1
PBP_dimer	PF03717.10	gi|297622151|ref|YP_003710288.1|	-	0.64	10.0	9.4	1.2	9.2	2.7	3.3	3	1	0	3	3	3	0	Penicillin-binding	Protein	dimerisation	domain
Helicase_C_2	PF13307.1	gi|297622152|ref|YP_003710289.1|	-	5e-50	169.7	0.0	1.1e-49	168.5	0.0	1.6	1	0	0	1	1	1	1	Helicase	C-terminal	domain
DEAD	PF00270.24	gi|297622152|ref|YP_003710289.1|	-	2.7e-07	30.2	0.2	0.0028	17.1	0.0	3.0	3	0	0	3	3	3	2	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|297622152|ref|YP_003710289.1|	-	1.7e-05	24.7	0.2	0.00027	20.8	0.1	2.4	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DEAD_2	PF06733.10	gi|297622152|ref|YP_003710289.1|	-	4.3e-05	22.9	0.0	9e-05	21.9	0.0	1.5	1	0	0	1	1	1	1	DEAD_2
Helicase_C	PF00271.26	gi|297622152|ref|YP_003710289.1|	-	0.00014	21.6	0.0	0.00062	19.5	0.0	2.1	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
SNF2_N	PF00176.18	gi|297622152|ref|YP_003710289.1|	-	0.0087	14.8	0.0	0.23	10.2	0.0	2.3	2	0	0	2	2	2	1	SNF2	family	N-terminal	domain
PhoH	PF02562.11	gi|297622152|ref|YP_003710289.1|	-	0.042	13.0	0.0	0.3	10.3	0.0	2.2	1	1	0	1	1	1	0	PhoH-like	protein
SecA_DEAD	PF07517.9	gi|297622152|ref|YP_003710289.1|	-	0.05	12.8	0.5	2.8	7.1	0.0	2.3	2	0	0	2	2	2	0	SecA	DEAD-like	domain
CarD_CdnL_TRCF	PF02559.11	gi|297622153|ref|YP_003710290.1|	-	0.0026	17.7	5.2	0.0051	16.8	3.6	1.5	1	0	0	1	1	1	1	CarD-like/TRCF	domain
Peptidase_M13_N	PF05649.8	gi|297622153|ref|YP_003710290.1|	-	0.005	15.9	1.6	0.0077	15.3	1.1	1.2	1	0	0	1	1	1	1	Peptidase	family	M13
T2SF	PF00482.18	gi|297622153|ref|YP_003710290.1|	-	0.021	14.7	0.5	0.076	12.9	0.1	2.0	2	1	0	2	2	2	0	Type	II	secretion	system	(T2SS),	protein	F
Herpes_UL6	PF01763.11	gi|297622153|ref|YP_003710290.1|	-	0.091	10.9	5.2	0.13	10.4	3.6	1.1	1	0	0	1	1	1	0	Herpesvirus	UL6	like
Herpes_ICP4_N	PF03584.10	gi|297622153|ref|YP_003710290.1|	-	0.14	11.6	0.1	0.63	9.5	0.0	2.0	2	0	0	2	2	2	0	Herpesvirus	ICP4-like	protein	N-terminal	region
DUF310	PF03750.8	gi|297622153|ref|YP_003710290.1|	-	0.29	11.3	7.4	0.48	10.6	3.9	2.2	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF310)
Phage_Nu1	PF07471.7	gi|297622154|ref|YP_003710291.1|	-	0.034	13.6	0.1	0.038	13.4	0.1	1.1	1	0	0	1	1	1	0	Phage	DNA	packaging	protein	Nu1
Glyco_hydro_77	PF02446.12	gi|297622156|ref|YP_003710293.1|	-	1.6e-130	435.9	0.1	1.9e-130	435.7	0.1	1.0	1	0	0	1	1	1	1	4-alpha-glucanotransferase
DUF1348	PF07080.6	gi|297622156|ref|YP_003710293.1|	-	0.0012	18.6	0.6	0.0029	17.3	0.4	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1348)
DUF3417	PF11897.3	gi|297622157|ref|YP_003710294.1|	-	0.053	13.4	0.0	0.056	13.3	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3417)
Transposase_mut	PF00872.13	gi|297622158|ref|YP_003710295.1|	-	6.8e-18	64.3	0.1	7.2e-18	64.2	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
DDE_Tnp_IS240	PF13610.1	gi|297622158|ref|YP_003710295.1|	-	0.01	15.7	0.0	0.012	15.5	0.0	1.1	1	0	0	1	1	1	0	DDE	domain
Transposase_mut	PF00872.13	gi|297622159|ref|YP_003710296.1|	-	2.3e-17	62.6	0.0	2.6e-17	62.4	0.0	1.0	1	0	0	1	1	1	1	Transposase,	Mutator	family
MULE	PF10551.4	gi|297622159|ref|YP_003710296.1|	-	1e-07	32.0	0.0	1.3e-07	31.6	0.0	1.2	1	0	0	1	1	1	1	MULE	transposase	domain
Transposase_mut	PF00872.13	gi|297622160|ref|YP_003710297.1|	-	0.033	12.7	0.0	0.035	12.6	0.0	1.0	1	0	0	1	1	1	0	Transposase,	Mutator	family
Transposase_mut	PF00872.13	gi|297622161|ref|YP_003710298.1|	-	0.091	11.2	0.0	0.093	11.2	0.0	1.0	1	0	0	1	1	1	0	Transposase,	Mutator	family
FixP_N	PF14715.1	gi|297622164|ref|YP_003710301.1|	-	0.0015	17.8	3.4	0.002	17.5	2.4	1.2	1	0	0	1	1	1	1	N-terminal	domain	of	cytochrome	oxidase-cbb3,	FixP
FixO	PF02433.10	gi|297622166|ref|YP_003710303.1|	-	2.6e-21	76.0	0.0	5e-21	75.1	0.0	1.4	1	0	0	1	1	1	1	Cytochrome	C	oxidase,	mono-heme	subunit/FixO
COX1	PF00115.15	gi|297622167|ref|YP_003710304.1|	-	2.7e-78	263.5	71.2	2.7e-78	263.5	49.3	1.4	1	1	1	2	2	2	2	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
Cytochrom_C	PF00034.16	gi|297622168|ref|YP_003710305.1|	-	1.5e-28	99.4	0.1	0.00073	20.3	0.0	8.1	9	0	0	9	9	9	6	Cytochrome	c
Cytochrome_CBB3	PF13442.1	gi|297622168|ref|YP_003710305.1|	-	1.9e-24	85.5	0.8	6.3e-07	29.4	0.0	7.6	7	1	0	7	7	7	4	Cytochrome	C	oxidase,	cbb3-type,	subunit	III
Cytochrome_C554	PF13435.1	gi|297622168|ref|YP_003710305.1|	-	1.7e-06	28.1	4.9	1.9	8.5	0.1	6.3	6	0	0	6	6	6	1	Cytochrome	c554	and	c-prime
FixO	PF02433.10	gi|297622168|ref|YP_003710305.1|	-	5.2e-05	22.7	11.2	0.0023	17.3	0.1	5.7	6	0	0	6	6	6	1	Cytochrome	C	oxidase,	mono-heme	subunit/FixO
Cytochrom_c3_2	PF14537.1	gi|297622168|ref|YP_003710305.1|	-	0.00093	19.4	10.0	4.8	7.5	0.1	6.1	6	0	0	6	6	6	1	Cytochrome	c3
DUF3365	PF11845.3	gi|297622168|ref|YP_003710305.1|	-	0.0047	16.7	7.8	5.9	6.7	0.0	5.1	4	1	0	4	4	4	2	Protein	of	unknown	function	(DUF3365)
DUF2267	PF10025.4	gi|297622168|ref|YP_003710305.1|	-	0.027	14.5	0.2	0.16	12.0	0.0	2.4	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2267)
CytoC_RC	PF02276.13	gi|297622168|ref|YP_003710305.1|	-	0.082	12.0	1.0	2.1	7.3	0.0	3.5	4	0	0	4	4	4	0	Photosynthetic	reaction	centre	cytochrome	C	subunit
Paired_CXXCH_1	PF09699.5	gi|297622168|ref|YP_003710305.1|	-	3.6	7.1	22.8	14	5.2	0.0	6.2	6	0	0	6	6	6	0	Doubled	CXXCH	motif	(Paired_CXXCH_1)
Cytochrom_B_N_2	PF13631.1	gi|297622169|ref|YP_003710306.1|	-	1.8e-37	128.7	5.8	1.8e-37	128.7	4.0	2.7	2	1	0	2	2	2	1	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_N	PF00033.14	gi|297622169|ref|YP_003710306.1|	-	0.00032	20.1	19.1	0.00032	20.1	13.2	3.2	2	2	0	2	2	2	1	Cytochrome	b(N-terminal)/b6/petB
DUF4405	PF14358.1	gi|297622169|ref|YP_003710306.1|	-	0.63	10.2	22.0	0.031	14.4	5.8	3.6	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4405)
Rieske	PF00355.21	gi|297622170|ref|YP_003710307.1|	-	1.8e-13	49.8	0.0	2.4e-13	49.4	0.0	1.2	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Herpes_UL46	PF03387.9	gi|297622170|ref|YP_003710307.1|	-	0.14	10.3	0.0	0.19	9.8	0.0	1.2	1	0	0	1	1	1	0	Herpesvirus	UL46	protein
CcoS	PF03597.10	gi|297622171|ref|YP_003710308.1|	-	1.1e-07	31.2	0.4	1.1e-07	31.1	0.3	1.0	1	0	0	1	1	1	1	Cytochrome	oxidase	maturation	protein	cbb3-type
Ion_trans	PF00520.26	gi|297622171|ref|YP_003710308.1|	-	0.055	12.7	0.3	0.055	12.7	0.2	1.0	1	0	0	1	1	1	0	Ion	transport	protein
Fer4_20	PF14691.1	gi|297622172|ref|YP_003710309.1|	-	3.8e-14	52.2	18.6	1.2e-11	44.2	0.0	4.2	3	1	0	3	3	3	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Pyr_redox_2	PF07992.9	gi|297622172|ref|YP_003710309.1|	-	2.4e-13	50.4	0.0	1.1e-12	48.2	0.0	2.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4	PF00037.22	gi|297622172|ref|YP_003710309.1|	-	3.9e-10	38.9	25.1	5.8e-08	32.0	0.9	3.5	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|297622172|ref|YP_003710309.1|	-	8.2e-07	29.3	23.3	1.1e-05	25.6	9.4	3.9	4	1	1	5	5	5	2	4Fe-4S	dicluster	domain
Pyr_redox_3	PF13738.1	gi|297622172|ref|YP_003710309.1|	-	8.2e-07	29.2	0.1	0.0031	17.6	0.0	3.1	1	1	3	4	4	4	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_8	PF13183.1	gi|297622172|ref|YP_003710309.1|	-	4.3e-06	26.6	9.1	4.3e-06	26.6	6.3	3.3	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
NAD_binding_8	PF13450.1	gi|297622172|ref|YP_003710309.1|	-	7.4e-06	25.9	0.1	1.7e-05	24.7	0.1	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Fer4_10	PF13237.1	gi|297622172|ref|YP_003710309.1|	-	2.1e-05	24.2	7.8	0.00047	19.8	0.6	4.1	4	1	0	4	4	3	2	4Fe-4S	dicluster	domain
AlaDh_PNT_C	PF01262.16	gi|297622172|ref|YP_003710309.1|	-	3.1e-05	23.6	0.2	0.1	12.1	0.0	2.6	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
Fer4_6	PF12837.2	gi|297622172|ref|YP_003710309.1|	-	3.8e-05	23.3	1.8	3.8e-05	23.3	1.3	4.2	5	0	0	5	5	4	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|297622172|ref|YP_003710309.1|	-	4.1e-05	23.7	26.7	0.00085	19.5	0.2	4.0	3	2	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|297622172|ref|YP_003710309.1|	-	7.2e-05	23.0	10.0	7.2e-05	23.0	6.9	3.5	3	1	0	3	3	3	1	4Fe-4S	dicluster	domain
Pyr_redox	PF00070.22	gi|297622172|ref|YP_003710309.1|	-	9.4e-05	22.7	3.7	0.03	14.7	0.3	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_16	PF13484.1	gi|297622172|ref|YP_003710309.1|	-	0.00015	22.4	7.5	0.00083	20.0	0.5	3.7	5	0	0	5	5	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|297622172|ref|YP_003710309.1|	-	0.00021	20.9	13.4	0.0017	18.1	1.5	4.9	5	0	0	5	5	4	2	4Fe-4S	binding	domain
NAD_binding_7	PF13241.1	gi|297622172|ref|YP_003710309.1|	-	0.0014	18.8	0.1	0.013	15.7	0.0	2.2	2	0	0	2	2	2	1	Putative	NAD(P)-binding
Fer4_21	PF14697.1	gi|297622172|ref|YP_003710309.1|	-	0.0027	17.5	0.6	0.0027	17.5	0.4	3.8	4	1	0	4	4	4	1	4Fe-4S	dicluster	domain
DAO	PF01266.19	gi|297622172|ref|YP_003710309.1|	-	0.02	13.8	1.2	0.041	12.7	0.2	2.0	3	0	0	3	3	3	0	FAD	dependent	oxidoreductase
Fer4_18	PF13746.1	gi|297622172|ref|YP_003710309.1|	-	0.044	14.1	0.2	0.044	14.1	0.2	3.8	4	1	0	4	4	4	0	4Fe-4S	dicluster	domain
F420_oxidored	PF03807.12	gi|297622172|ref|YP_003710309.1|	-	0.066	13.6	0.2	0.21	12.0	0.0	2.0	2	1	0	2	2	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
Fer4_15	PF13459.1	gi|297622172|ref|YP_003710309.1|	-	0.45	11.1	14.5	0.12	12.9	1.1	3.1	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|297622172|ref|YP_003710309.1|	-	4.2	7.8	17.2	1.5	9.2	2.3	3.4	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Acylphosphatase	PF00708.13	gi|297622173|ref|YP_003710310.1|	-	1.8e-23	82.4	0.0	2e-23	82.3	0.0	1.0	1	0	0	1	1	1	1	Acylphosphatase
Dus	PF01207.12	gi|297622174|ref|YP_003710311.1|	-	1.4e-83	280.3	0.0	1.7e-83	280.0	0.0	1.0	1	0	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
PEP_mutase	PF13714.1	gi|297622174|ref|YP_003710311.1|	-	9.2e-07	28.3	0.2	1.4e-06	27.6	0.1	1.3	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
DeoC	PF01791.4	gi|297622174|ref|YP_003710311.1|	-	0.0012	18.1	1.4	0.029	13.6	0.2	2.2	1	1	2	3	3	3	2	DeoC/LacD	family	aldolase
DHO_dh	PF01180.16	gi|297622174|ref|YP_003710311.1|	-	0.013	14.4	0.0	2.1	7.2	0.0	2.1	2	0	0	2	2	2	0	Dihydroorotate	dehydrogenase
SOR_SNZ	PF01680.12	gi|297622174|ref|YP_003710311.1|	-	0.77	9.3	3.4	1.1	8.7	0.3	2.5	1	1	1	2	2	2	0	SOR/SNZ	family
YGGT	PF02325.12	gi|297622175|ref|YP_003710312.1|	-	1.9e-20	72.5	5.8	2.3e-20	72.3	4.0	1.1	1	0	0	1	1	1	1	YGGT	family
PilM_2	PF11104.3	gi|297622176|ref|YP_003710313.1|	-	4.2e-16	58.7	0.0	6.8e-16	58.0	0.0	1.4	1	0	0	1	1	1	1	Type	IV	pilus	assembly	protein	PilM;
Ank_4	PF13637.1	gi|297622176|ref|YP_003710313.1|	-	0.094	13.2	0.0	0.37	11.3	0.0	2.0	1	0	0	1	1	1	0	Ankyrin	repeats	(many	copies)
T2SL	PF05134.8	gi|297622176|ref|YP_003710313.1|	-	0.14	11.2	0.0	0.27	10.3	0.0	1.4	1	0	0	1	1	1	0	Type	II	secretion	system	(T2SS),	protein	L
Herpes_U59	PF04529.7	gi|297622176|ref|YP_003710313.1|	-	0.15	10.8	0.0	0.26	10.0	0.0	1.3	1	0	0	1	1	1	0	Herpesvirus	U59	protein
MORN_2	PF07661.8	gi|297622178|ref|YP_003710315.1|	-	1.4e-16	58.3	25.4	0.27	11.3	0.4	11.7	10	3	2	12	12	12	7	MORN	repeat	variant
DBR1	PF05011.8	gi|297622178|ref|YP_003710315.1|	-	0.076	12.8	0.0	0.14	12.0	0.0	1.4	1	0	0	1	1	1	0	Lariat	debranching	enzyme,	C-terminal	domain
5-FTHF_cyc-lig	PF01812.15	gi|297622179|ref|YP_003710316.1|	-	1.2e-32	113.2	0.0	1.4e-32	112.9	0.0	1.0	1	0	0	1	1	1	1	5-formyltetrahydrofolate	cyclo-ligase	family
RecA	PF00154.16	gi|297622180|ref|YP_003710317.1|	-	1.8e-158	526.7	2.5	2.1e-158	526.5	1.8	1.0	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
Rad51	PF08423.6	gi|297622180|ref|YP_003710317.1|	-	1.1e-09	37.5	0.2	1.4e-08	34.0	0.1	2.1	1	1	0	1	1	1	1	Rad51
KaiC	PF06745.8	gi|297622180|ref|YP_003710317.1|	-	7.4e-09	35.0	0.8	5.3e-08	32.2	0.6	2.6	1	1	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|297622180|ref|YP_003710317.1|	-	2.2e-07	30.5	0.7	3.1e-06	26.7	0.5	2.1	1	1	0	1	1	1	1	AAA	domain
CobU	PF02283.11	gi|297622180|ref|YP_003710317.1|	-	4.9e-06	26.0	0.0	9.6e-06	25.0	0.0	1.5	1	0	0	1	1	1	1	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
Arch_ATPase	PF01637.13	gi|297622180|ref|YP_003710317.1|	-	0.00019	21.1	0.0	0.00046	19.9	0.0	1.7	1	1	0	1	1	1	1	Archaeal	ATPase
AAA	PF00004.24	gi|297622180|ref|YP_003710317.1|	-	0.0021	18.2	0.0	0.0058	16.8	0.0	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.22	gi|297622180|ref|YP_003710317.1|	-	0.0032	17.7	0.0	0.0071	16.6	0.0	1.6	1	1	0	1	1	1	1	ABC	transporter
AAA_16	PF13191.1	gi|297622180|ref|YP_003710317.1|	-	0.0064	16.4	0.2	0.028	14.4	0.0	1.9	2	0	0	2	2	2	1	AAA	ATPase	domain
DAP3	PF10236.4	gi|297622180|ref|YP_003710317.1|	-	0.0077	15.2	0.0	0.036	12.9	0.0	1.9	2	0	0	2	2	2	1	Mitochondrial	ribosomal	death-associated	protein	3
AAA_35	PF14516.1	gi|297622180|ref|YP_003710317.1|	-	0.0083	14.7	0.0	0.016	13.8	0.0	1.4	1	0	0	1	1	1	1	AAA-like	domain
AAA_22	PF13401.1	gi|297622180|ref|YP_003710317.1|	-	0.011	15.8	0.0	0.035	14.2	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
CbiA	PF01656.18	gi|297622180|ref|YP_003710317.1|	-	0.014	14.8	0.0	0.045	13.1	0.0	1.8	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
PNPase	PF03726.9	gi|297622180|ref|YP_003710317.1|	-	0.043	14.0	0.8	1.1	9.5	0.0	2.9	3	0	0	3	3	3	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
AAA_14	PF13173.1	gi|297622180|ref|YP_003710317.1|	-	0.047	13.5	0.0	0.1	12.4	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|297622180|ref|YP_003710317.1|	-	0.091	12.1	0.0	0.14	11.5	0.0	1.4	1	1	0	1	1	1	0	AAA-like	domain
MobB	PF03205.9	gi|297622180|ref|YP_003710317.1|	-	0.12	12.0	0.0	0.29	10.8	0.0	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B